{"text_format":"3","workbook":"xlsx","n_sheets":6,"sheets":["Description","Supplemental Data Set 1","Supplemental Data Set 2","Supplemental Data Set 3","Supplemental Data Set 4","Supplemental Data Set 5"],"read":"whole","date_system":"1900"}

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["Description of content of each data set"]
[]
["Supplemental Data Set 1","Differentially expressed (DE) genes between individual subsequent days after pollination (DAP) for Col-0. AGI – gene identifier, log2FC – log2 fold- change, stat - statistics, p-adj – false discovery rate adjusted p-value <0.01."]
["Supplemental Data Set 2","Differentially expressed (DE) genes between individual subsequent days after pollination (DAP) for abi3-6. AGI – gene identifier, log2FC – log2 fold- change, stat - statistics, p-adj – false discovery rate adjusted p-value <0.01."]
["Supplemental Data Set 3","Gene Ontology (GO) term enrichment for downregulated and upregulated differentially expressed (DE) genes at 20 and 22 days after pollination (DAP)"]
["Supplemental Data Set 4","List of TFs identified using TF2Network and in the WGNA analysis."]
["Supplemental Data Set 5","Genes belonging to 17 modules created with WGCNA."]

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["Supplemental Data Set 1. Differentially expressed (DE) genes between individual subsequent days after pollination (DAP) for Col-0. AGI – gene identifier, log2FC – log2 fold- change, stat - statistics, p-adj – false discovery rate adjusted p-value <0.01."]
[]
["DE Col-0 (round 2)_12d vs Col-0 (round 2)_14d",{"$nulls":8},"DE Col-0 (round 2)_14d vs Col-0 (round 2)_16d",{"$nulls":8},"DE Col-0 (round 2)_16d vs Col-0 (round 2)_18d",{"$nulls":8},"DE Col-0 (round 2)_18d vs Col-0 (round 2)_20d",{"$nulls":8},"DE Col-0 (round 2)_20d vs Col-0 (round 2)_22d",{"$nulls":8},"DE Col-0 (round 2)_22d vs Col-0 (round 2)_24d",{"$nulls":8},"DE Col-0 (round 2)_24d vs Col-0 (round 2)_DS"]
["AGI","gene","baseMean","log2FC","lfcSE","stat","pvalue","padj","description","AGI","gene","baseMean","log2FC","lfcSE","stat","pvalue","padj","description","AGI","gene","baseMean","log2FC","lfcSE","stat","pvalue","padj","description","AGI","gene","baseMean","log2FC","lfcSE","stat","pvalue","padj","description","AGI","gene","baseMean","log2FC","lfcSE","stat","pvalue","padj","description","AGI","gene","baseMean","log2FC","lfcSE","stat","pvalue","padj","description","AGI","gene","baseMean","log2FC","lfcSE","stat","pvalue","padj","description"]
["AT3G21370","BGLU19",1765.2,5.6118,0.16301,34.426,1.03E-259,{"v":1.85e-255,"d":"1.85E-255"},"full_name=beta glucosidase 19. beta glucosidase 19.","AT5G49190","SUS2",4371.2,-5.0975,0.11086,-45.983,0,0,"full_name=sucrose synthase 2. sucrose synthase 2. Encodes a sucrose synthase (SUS2). The activity of the enzyme could not be assayed as proved to be insoluble (PMID 17257168). However, analyses of an sus2 mutant revealed a deficiency in sucrose synthase activity 12 and 15 days after flowering. There are some reports that SUS2 transcript levels are increased in leaves specifically by O(2) deficiency whereas other reports indicate that SUS2 is expressed only in seeds. Immulocalization shows that SUS2 is present in the cytosol of developing seeds, but, it also associated with plastids, though not located within them.","AT3G22490","ATRAB28",2127.1,5.096,0.1469,34.69,1.12E-263,1.89E-259,"Seed maturation protein.","AT5G07190","ATS3",9820.5,-6.1836,0.11219,-55.119,0,0,"full_name=seed gene 3. embryo-specific protein 3. Gene is expressed preferentially in the embryo and encodes a unique protein of unknown function.","AT1G16030","Hsp70b",22125,-1.9339,0.056479,-34.242,{"v":5.71e-257,"d":"5.71E-257"},{"v":9.09e-253,"d":"9.09E-253"},"full_name=heat shock protein 70B. heat shock protein 70B.","AT5G65720","NFS1",1140,-1.9,0.091395,-20.789,{"v":5.47e-96,"d":"5.47E-96"},{"v":4.76e-92,"d":"4.76E-92"},"full_name=nitrogen fixation S (NIFS)-like 1. nitrogen fixation S (NIFS)-like 1. Encodes a cysteine desulfurase whose activity is dependent on AtSufE activation. It requires pyridoxal phosphate (PLP) for proper folding. Its catalytic efficiency is increase three-fold in the presence of AtFH (frataxin).","AT1G68020","ATTPS6",1300.3,1.4906,0.099269,15.016,{"v":5.76e-51,"d":"5.76E-51"},{"v":9.17e-47,"d":"9.17E-47"},"UDP-Glycosyltransferase / trehalose-phosphatase family protein. Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain and a trehalose phosphatase (TPP)-like domain. It can complement a yeast mutant lacking both of these activities suggesting that this is a bifunctional enzyme."]
["AT5G09530","PELPK1",11799,-2.9934,0.091367,-32.762,2.06E-235,1.85E-231,"full_name=Pro-Glu-Leu|Ile|Val-Pro-Lys 1. hydroxyproline-rich glycoprotein family protein. The gene encodes a unique protein which contains 36 repeats of a unique pentapeptide (Pro-Glu-Leu|Ile|Val-Pro-Lys). It has been shown tobe involved in growth and development.","AT3G21370","BGLU19",19813,3.515,0.10802,32.54,2.87E-232,{"v":2.5e-228,"d":"2.50E-228"},"full_name=beta glucosidase 19. beta glucosidase 19.","AT2G40170","GEA6",19308,6.0066,0.19746,30.42,{"v":2.99e-203,"d":"2.99E-203"},{"v":2.52e-199,"d":"2.52E-199"},"full_name=LATE EMBRYOGENESIS ABUNDANT 6. Stress induced protein. Encodes a group 1 LEA gene that is activated by direct binding of ABI5 to its promoter and is involved in response to ABA. Is required for normal seed development. Involved in regulating the timing of dessication tolerance and rate of water loss during seed maturation.","AT1G75830","LCR67",83644,3.4346,0.083541,41.113,0,0,"full_name=low-molecular-weight cysteine-rich 67. low-molecular-weight cysteine-rich 67. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","AT4G09610","GASA2",3683.5,-2.1869,0.07709,-28.369,{"v":4.94e-177,"d":"4.94E-177"},{"v":3.93e-173,"d":"3.93E-173"},"full_name=GAST1 protein homolog 2. GAST1 protein homolog 2.","AT1G68020","ATTPS6",1132.4,-1.4888,0.091739,-16.229,{"v":3.14e-59,"d":"3.14E-59"},1.37E-55,"UDP-Glycosyltransferase / trehalose-phosphatase family protein. Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain and a trehalose phosphatase (TPP)-like domain. It can complement a yeast mutant lacking both of these activities suggesting that this is a bifunctional enzyme.","AT1G68140",null,862.34,-0.95955,0.11011,-8.7145,{"v":2.92e-18,"d":"2.92E-18"},{"v":2.32e-14,"d":"2.32E-14"},"zinc finger/BTB domain protein, putative (DUF1644)."]
["AT2G33070","NSP2",1933,7.3081,0.22477,32.513,{"v":6.92e-232,"d":"6.92E-232"},{"v":4.15e-228,"d":"4.15E-228"},"full_name=nitrile specifier protein 2. nitrile specifier protein 2. Encodes a nitrile-specifier protein NSP2. NSP2 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation.","AT3G21380",null,6199,3.1366,0.099765,31.44,{"v":5.76e-217,"d":"5.76E-217"},{"v":3.35e-213,"d":"3.35E-213"},"Mannose-binding lectin superfamily protein.","AT2G41280","M10",3310.5,5.8925,0.19425,30.334,{"v":4.1e-202,"d":"4.10E-202"},{"v":2.31e-198,"d":"2.31E-198"},"late embryogenesis abundant protein (M10) / LEA protein M10. Encodes a hydrophilic protein similar to Late Embryogenesis Activated (LEA) proteins expressed during embryogenesis, which are thought to be involved in the acquisition of dessication tolerance.","AT1G03890",null,31437,-3.2256,0.083687,-38.544,0,0,"RmlC-like cupins superfamily protein.","AT1G52560","HSP26.5",4078.6,-2.3507,0.085743,-27.416,{"v":1.79e-165,"d":"1.79E-165"},{"v":9.5e-162,"d":"9.50E-162"},"HSP20-like chaperones superfamily protein.","AT5G57390","AIL5",1344.8,-0.87438,0.086628,-10.094,{"v":5.9e-24,"d":"5.90E-24"},{"v":1.71e-20,"d":"1.71E-20"},"full_name=AINTEGUMENTA-like 5. AINTEGUMENTA-like 5. Encodes a member of the AP2 family of transcriptional regulators. May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.essential for the developmental transition between the embryonic and vegetative phases in plants. Overexpression results in the formation of somatic embryos on cotyledons. It is also required to maintain high levels of PIN1 expression at the periphery of the meristem and modulate local auxin production in the central region of the SAM which underlies phyllotactic transitions.","AT3G44010",null,758.43,1.2278,0.1536,7.9932,1.31E-15,{"v":6.98e-12,"d":"6.98E-12"},"Ribosomal protein S14p/S29e family protein."]
["AT1G14940",null,1394.7,6.2197,0.19314,32.202,1.64E-227,7.38E-224,"Polyketide cyclase/dehydrase and lipid transport superfamily protein.","AT2G34700",null,2553,-2.6073,0.092145,-28.296,{"v":3.92e-176,"d":"3.92E-176"},1.71E-172,"Pollen Ole e 1 allergen and extensin family protein.","AT3G22500","ATECP31",4167.2,4.8646,0.16734,29.07,{"v":8.6e-186,"d":"8.60E-186"},{"v":3.63e-182,"d":"3.63E-182"},"full_name=LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP31. Seed maturation protein. late embryogenesis abundant (LEA) protein","AT3G60730",null,1188.4,-6.3224,0.17502,-36.124,{"v":9.57e-286,"d":"9.57E-286"},{"v":3.91e-282,"d":"3.91E-282"},"Plant invertase/pectin methylesterase inhibitor superfamily.","AT1G73190","TIP3;1",33174,-1.3,0.049363,-26.337,{"v":7.28e-153,"d":"7.28E-153"},{"v":2.9E-149,"d":"2.90E-149"},"Aquaporin-like superfamily protein. Moves to the Protein Storage Vacuole in a Golgi independent manner","AT5G38650","UMP1B",692.7,-0.98552,0.10047,-9.8093,{"v":1.03e-22,"d":"1.03E-22"},{"v":2.24e-19,"d":"2.24E-19"},"Proteasome maturation factor UMP1.","AT5G38660","APE1",926.75,-0.88022,0.12274,-7.1716,{"v":7.41e-13,"d":"7.41E-13"},{"v":2.95e-09,"d":"2.95E-09"},"full_name=ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT. acclimation of photosynthesis to environment. mutant has Altered acclimation responses;"]
["AT4G09600","GASA3",3290.9,4.6819,0.15666,29.885,{"v":3.08e-196,"d":"3.08E-196"},1.11E-192,"full_name=GAST1 protein homolog 3. GAST1 protein homolog 3. One of GASA gene family which is related to a GA-stimulated transcript (GAST) from tomato.","AT4G11310","CP1",6341.1,2.9816,0.10619,28.079,{"v":1.76e-173,"d":"1.76E-173"},{"v":6.12e-170,"d":"6.12E-170"},"Papain family cysteine protease. cysteine proteinase precursor-like protein","AT1G56600","GolS2",1186.4,4.0169,0.14415,27.865,{"v":7.01e-171,"d":"7.01E-171"},2.37E-167,"full_name=galactinol synthase 2. galactinol synthase 2. GolS2 is a galactinol synthase that catalyzes the formation of galactinol from UDP-galactose and myo-inositol. GolS2 transcript levels rise in response to methyl viologen, an oxidative damage-inducing agent. Plants over-expressing GolS2 have increased tolerance to salt, chilling, and high-light stress.","AT4G36360","BGAL3",5740.9,-3.2769,0.091319,-35.884,5.42E-282,{"v":1.77e-278,"d":"1.77E-278"},"full_name=beta-galactosidase 3. beta-galactosidase 3. putative beta-galactosidase (BGAL3 gene)","AT2G46240","BAG6",1203.3,-2.648,0.10156,-26.073,{"v":7.46e-150,"d":"7.46E-150"},{"v":2.38e-146,"d":"2.38E-146"},"full_name=BCL-2-associated athanogene 6. BCL-2-associated athanogene 6. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Expression of BAG6 in leaves was strongly induced by heat stress. Knockout mutants exhibited enhanced susceptibility to fungal pathogen Botrytis cinerea. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.","AT1G56660",null,525.48,1.3865,0.14884,9.3149,1.22E-20,{"v":2.13e-17,"d":"2.13E-17"},"MAEBL domain protein.","AT5G47080","CKB1",1015.2,0.72172,0.11512,6.269,{"v":3.63e-10,"d":"3.63E-10"},{"v":1.16e-06,"d":"1.16E-06"},"full_name=casein kinase II beta chain 1. casein kinase II beta chain 1. Regulatory subunit beta of casein kinase II (CK2). purified CKB1 resulted in up 100-fold stimulation of casein kinase activity compared with the CKA1 activity alone. Forms a tetrameric complex with CKA1 (CKA1(2)CKB1(2)). One known substrate of CK2 is Phytochrome Interacting Factor 1 (PIF1). CK2-mediated phosphorylation enhances the light-induced degradation of PIF1 to promote photomorphogenesis."]
["AT5G44550","CASPL1B1",1644.3,-4.068,0.13774,-29.534,{"v":1.05e-191,"d":"1.05E-191"},{"v":3.13e-188,"d":"3.13E-188"},"Uncharacterized protein family (UPF0497).","AT5G57550","XTH25",14694,3.042,0.10908,27.889,{"v":3.6E-171,"d":"3.60E-171"},{"v":1.05e-167,"d":"1.05E-167"},"full_name=xyloglucan endotransglucosylase/hydrolase 25. xyloglucan endotransglucosylase/hydrolase 25. xyloglucan endotransglycosylase-related protein (XTR3)","AT5G12030","HSP17.6A",6424.6,5.76,0.21698,26.546,{"v":2.86e-155,"d":"2.86E-155"},{"v":8.06e-152,"d":"8.06E-152"},"full_name=heat shock protein 17.6A. heat shock protein 17.6A. Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development.","AT3G61680","PLIP1",1367,-3.7811,0.10596,-35.684,{"v":6.93e-279,"d":"6.93E-279"},{"v":1.89e-275,"d":"1.89E-275"},"alpha/beta-Hydrolases superfamily protein.","AT3G46230","HSP17.4",58314,-2.2379,0.086114,-25.988,{"v":6.78e-149,"d":"6.78E-149"},{"v":1.8E-145,"d":"1.80E-145"},"full_name=heat shock protein 17.4. heat shock protein 17.4. member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds","AT5G38660","APE1",824.21,0.80821,0.10297,7.8489,{"v":4.2e-15,"d":"4.20E-15"},{"v":6.09e-12,"d":"6.09E-12"},"full_name=ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT. acclimation of photosynthesis to environment. mutant has Altered acclimation responses;","AT5G37680","ARLA1A",429.19,-0.77698,0.13472,-5.7672,{"v":8.06e-09,"d":"8.06E-09"},{"v":2.14e-05,"d":"2.14E-05"},"full_name=ADP-ribosylation factor-like A1A. ADP-ribosylation factor-like A1A. A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARL GTPases."]
["AT4G38080",null,3259.2,-3.3529,0.11766,-28.497,{"v":1.26e-178,"d":"1.26E-178"},{"v":3.24e-175,"d":"3.24E-175"},"hydroxyproline-rich glycoprotein family protein.","AT1G67090","RBCS1A",3624.4,-3.1198,0.11526,-27.066,{"v":2.45e-161,"d":"2.45E-161"},{"v":6.1e-158,"d":"6.10E-158"},"full_name=ribulose bisphosphate carboxylase small chain 1A. ribulose bisphosphate carboxylase small chain 1A. Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410). Functions to yield sufficient Rubisco content for leaf photosynthetic capacity.","AT3G47340","ASN1",1456.8,3.6215,0.14635,24.745,3.51E-135,{"v":8.48e-132,"d":"8.48E-132"},"full_name=glutamine-dependent asparagine synthase 1. glutamine-dependent asparagine synthase 1. encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.","AT1G03880","CRU2",217910,-2.2422,0.066788,-33.571,{"v":4.4e-247,"d":"4.40E-247"},{"v":1.03e-243,"d":"1.03E-243"},"full_name=cruciferin 2. cruciferin 2. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT2G29500","HSP17.6B",2408.6,-2.4069,0.093361,-25.781,{"v":1.45e-146,"d":"1.45E-146"},{"v":3.31e-143,"d":"3.31E-143"},"HSP20-like chaperones superfamily protein.","AT5G14450",null,288.79,-1.1386,0.18245,-6.2404,{"v":4.37e-10,"d":"4.37E-10"},{"v":5.43e-07,"d":"5.43E-07"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT3G47875",null,29.082,3.3577,0.59917,5.6039,{"v":2.1e-08,"d":"2.10E-08"},{"v":4.77e-05,"d":"4.77E-05"},"transposable_element_gene."]
["AT2G48140","EDA4",1191.5,-3.3685,0.12064,-27.921,1.48E-171,{"v":3.33e-168,"d":"3.33E-168"},"full_name=embryo sac development arrest 4. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT3G12203","scpl17",4509,-2.8656,0.1071,-26.758,{"v":1.01e-157,"d":"1.01E-157"},{"v":2.19e-154,"d":"2.19E-154"},"full_name=serine carboxypeptidase-like 17. serine carboxypeptidase-like 17.","AT1G16030","Hsp70b",9532,4.1575,0.16815,24.724,{"v":5.84e-135,"d":"5.84E-135"},1.23E-131,"full_name=heat shock protein 70B. heat shock protein 70B.","AT1G62000","TBA1",4284.2,-7.5708,0.22717,-33.326,{"v":1.62e-243,"d":"1.62E-243"},{"v":3.3e-240,"d":"3.30E-240"},"transmembrane protein.","AT4G09600","GASA3",9707.4,-1.9019,0.073904,-25.735,{"v":4.8e-146,"d":"4.80E-146"},{"v":9.55e-143,"d":"9.55E-143"},"full_name=GAST1 protein homolog 3. GAST1 protein homolog 3. One of GASA gene family which is related to a GA-stimulated transcript (GAST) from tomato.","AT5G45775",null,549.85,-0.96609,0.18944,-5.0996,{"v":3.4e-07,"d":"3.40E-07"},{"v":0.000371,"d":"3.71E-04"},"Ribosomal L5P family protein.","AT3G27260","GTE8",1171.7,-0.67383,0.12769,-5.2771,{"v":1.31E-7,"d":"1.31E-07"},{"v":2.61E-4,"d":"2.61E-04"},"full_name=global transcription factor group E8. global transcription factor group E8. Kinase like protein with similarity to yeast BDF1 and human RING3 protein, which have two bromodomains GTE8 has a single bromodomain"]
["AT4G11310","CP1",812.09,4.3149,0.15657,27.559,{"v":3.47e-167,"d":"3.47E-167"},{"v":6.93e-164,"d":"6.93E-164"},"Papain family cysteine protease. cysteine proteinase precursor-like protein","AT5G66190","FNR1",703.48,-3.4519,0.13332,-25.891,{"v":8.37e-148,"d":"8.37E-148"},1.62E-144,"full_name=ferredoxin-NADP(+)-oxidoreductase 1. ferredoxin-NADP[+]-oxidoreductase 1. Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the thylakoid. The affinity of this enzyme for ferredoxin is slightly, but significantly, higher than AtLFNR2, an isoform of the same enzyme. AtLFNR1 forms a heterodimer with AtFNR2 and is also a prerequisite to attach AtFNR2 to the thylakoid membrane.","AT2G23240","AtMT4b",957.34,4.6019,0.1896,24.272,{"v":3.9e-130,"d":"3.90E-130"},{"v":7.32e-127,"d":"7.32E-127"},"full_name=Arabidopsis thaliana metallothionein 4b. Plant EC metallothionein-like protein, family 15. AtMT4b is a member of Type 4 metallothionein (MT) genes. It is involved in the early develoment of the embryo and in the accumulation of metal ions especially Zn in the seeds.","AT4G04840","MSRB6",1494.6,-4.646,0.14397,-32.271,1.77E-228,{"v":3.22e-225,"d":"3.22E-225"},"full_name=methionine sulfoxide reductase B6. methionine sulfoxide reductase B6.","AT1G05680","UGT74E2",978.11,2.3578,0.094484,24.954,1.93E-137,{"v":3.41e-134,"d":"3.41E-134"},"full_name=Uridine diphosphate glycosyltransferase 74E2. Uridine diphosphate glycosyltransferase 74E2. Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.","AT2G47890",null,872.18,-0.52423,0.10409,-5.0362,{"v":4.75E-7,"d":"4.75E-07"},{"v":0.000459,"d":"4.59E-04"},"B-box type zinc finger protein with CCT domain-containing protein.","AT3G13400","sks13",153.09,1.1826,0.23513,5.0297,{"v":4.91e-07,"d":"4.91E-07"},{"v":0.000869,"d":"8.69E-04"},"full_name=SKU5 similar 13. SKU5 similar 13."]
["AT2G22510",null,2212.8,-3.3577,0.12336,-27.22,{"v":3.77e-163,"d":"3.77E-163"},6.78E-160,"hydroxyproline-rich glycoprotein family protein.","AT2G34420","LHB1B2",608.92,-4.6381,0.17958,-25.828,4.29E-147,7.48E-144,null,"AT5G66400","RAB18",66466,2.6916,0.11576,23.252,{"v":1.35e-119,"d":"1.35E-119"},2.28E-116,"full_name=RESPONSIVE TO ABA 18. Dehydrin family protein. Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. ABA- and drought-induced glycine-rice dehydrin protein. The ABA-induced expression of RAB18 was reduced following ACC application, indicating that ethylene inhibits the ABA signaling pathway. RAB18 is also expressed in response to the formation of the phospholipid diacylglycerol pyrophosphate. COR47 and RAB18 double overexpressor plants are cold tolerant. Expressed in guard cells.","AT2G42840","PDF1",4307.7,-7.3024,0.22635,-32.262,2.39E-228,{"v":3.9E-225,"d":"3.90E-225"},"full_name=protodermal factor 1. protodermal factor 1. Encodes a putative extracellular proline-rich protein is exclusively expressed in the L1 layer of vegetative, inflorescence and floral meristems and the protoderm of organ primordia.","AT1G03890",null,4435.4,-2.6148,0.1072,-24.392,2.07E-131,{"v":3.3E-128,"d":"3.30E-128"},"RmlC-like cupins superfamily protein.","AT2G22240","MIPS2",8687.1,0.41943,0.08735,4.8018,{"v":1.57E-6,"d":"1.57E-06"},0.00137,"full_name=myo-inositol-1-phosphate synthase 2. myo-inositol-1-phosphate synthase 2. ** Referred to as MIPS1 in Mitsuhashi et al 2008. Myo-inositol-1-phosphate synthase isoform 2. Expressed in leaf, root and silique. Immunolocalization experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.","AT3G01270",null,115.76,1.4189,0.28606,4.9601,{"v":7.05e-07,"d":"7.05E-07"},1.122E-3,"Pectate lyase family protein."]
["AT5G09520","PELPK2",625.12,-4.2594,0.15656,-27.206,{"v":5.51e-163,"d":"5.51E-163"},{"v":9.01e-160,"d":"9.01E-160"},"full_name=Pro-Glu-Leu|Ile|Val-Pro-Lys 2. hydroxyproline-rich glycoprotein family protein.","AT1G29930","CAB1",700.09,-4.9685,0.19627,-25.314,{"v":2.22e-141,"d":"2.22E-141"},{"v":3.52e-138,"d":"3.52E-138"},"full_name=chlorophyll A/B binding protein 1. chlorophyll A/B binding protein 1. Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.","AT3G46230","HSP17.4",9010.1,4.0495,0.17863,22.67,{"v":8.83e-114,"d":"8.83E-114"},1.36E-110,"full_name=heat shock protein 17.4. heat shock protein 17.4. member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds","AT1G52560","HSP26.5",2966.9,3.4383,0.10803,31.829,{"v":2.59e-222,"d":"2.59E-222"},{"v":3.84e-219,"d":"3.84E-219"},"HSP20-like chaperones superfamily protein.","AT5G07340",null,512.86,3.5791,0.14868,24.073,{"v":4.85e-128,"d":"4.85E-128"},{"v":7.01e-125,"d":"7.01E-125"},"Calreticulin family protein.","AT4G25200","HSP23.6-MITO",948.98,0.42866,0.091975,4.6607,{"v":3.15e-06,"d":"3.15E-06"},0.002292,"full_name=mitochondrion-localized small heat shock protein 23.6. mitochondrion-localized small heat shock protein 23.6. AtHSP23.6-mito mRNA, nuclear gene encoding mitochondrial","AT2G47040","VGD1",152.05,1.2389,0.25199,4.9164,{"v":8.81e-07,"d":"8.81E-07"},1.276E-3,"full_name=VANGUARD1. Plant invertase/pectin methylesterase inhibitor superfamily. Share high homologies with a group of pectin methylesterases (PME), pollen specific, and is required for enhancing the growth of pollen tube in style and transmitting tract tissues."]
["AT4G10340","LHCB5",1556.3,-3.0831,0.11346,-27.174,{"v":1.33e-162,"d":"1.33E-162"},{"v":2E-159,"d":"2.00E-159"},"full_name=light harvesting complex of photosystem II 5. light harvesting complex of photosystem II 5. photosystem II encoding the light-harvesting chlorophyll a/b binding protein CP26 of the antenna system of the photosynthetic apparatus","AT4G12800","PSAL",487.82,-4.3793,0.17651,-24.81,{"v":6.91e-136,"d":"6.91E-136"},{"v":1e-132,"d":"1.00E-132"},"full_name=photosystem I subunit l. photosystem I subunit l. Encodes subunit L of photosystem I reaction center.","AT3G10020",null,1953.5,2.9995,0.13551,22.135,{"v":1.47e-108,"d":"1.47E-108"},{"v":2.07e-105,"d":"2.07E-105"},"plant/protein.","AT2G02930","GSTF3",1048.4,5.9204,0.18859,31.393,{"v":2.49e-216,"d":"2.49E-216"},{"v":3.39e-213,"d":"3.39E-213"},"full_name=glutathione S-transferase F3. glutathione S-transferase F3. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).","AT5G12030","HSP17.6A",63720,-1.696,0.070818,-23.949,{"v":9.58e-127,"d":"9.58E-127"},1.27E-123,"full_name=heat shock protein 17.6A. heat shock protein 17.6A. Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development.","AT5G14040","PHT3;1",341.7,-0.73974,0.15874,-4.6602,{"v":3.16e-06,"d":"3.16E-06"},0.002292,"full_name=phosphate transporter 3;1. phosphate transporter 3;1. Encodes a mitochondrial phosphate transporter. Modulates plant responses to salt stress.","AT2G33070","NSP2",29417,-0.42738,0.087327,-4.8941,{"v":9.88e-07,"d":"9.88E-07"},0.001311,"full_name=nitrile specifier protein 2. nitrile specifier protein 2. Encodes a nitrile-specifier protein NSP2. NSP2 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation."]
["AT5G09480",null,5872.2,-2.5912,0.09537,-27.17,1.48E-162,{"v":2.05e-159,"d":"2.05E-159"},"hydroxyproline-rich glycoprotein family protein.","AT1G74470",null,600.15,-3.6612,0.14843,-24.667,{"v":2.43e-134,"d":"2.43E-134"},{"v":3.26e-131,"d":"3.26E-131"},"Pyridine nucleotide-disulfide oxidoreductase family protein. Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate.","AT1G20620","CAT3",4034.8,2.6655,0.12353,21.578,{"v":2.9e-103,"d":"2.90E-103"},{"v":3.77e-100,"d":"3.77E-100"},"full_name=catalase 3. catalase 3. Catalase, catalyzes the breakdown of hydrogen peroxide (H2O2) into water and oxygen.","AT1G15960","NRAMP6",1649.5,-4.3037,0.13729,-31.347,1.05E-215,{"v":1.33e-212,"d":"1.33E-212"},"full_name=NRAMP metal ion transporter 6. NRAMP metal ion transporter 6. member of Nramp2 family","AT3G06325",null,592.66,4.3708,0.18288,23.9,3.09E-126,3.78E-123,"Natural antisense transcript overlaps with AT3G41762. Natural antisense transcript overlaps with AT3G41762","AT4G25630","FIB2",605.2,-0.78663,0.17032,-4.6187,{"v":3.86e-06,"d":"3.86E-06"},0.002574,"full_name=fibrillarin 2. fibrillarin 2. encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.2f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated.","AT5G45775",null,591.08,0.83448,0.18344,4.5491,{"v":5.39e-06,"d":"5.39E-06"},0.006601,"Ribosomal L5P family protein."]
["AT3G21380",null,695.38,6.2985,0.23492,26.811,{"v":2.43e-158,"d":"2.43E-158"},{"v":3.12e-155,"d":"3.12E-155"},"Mannose-binding lectin superfamily protein.","AT5G66570","PSBO1",410.75,-4.3589,0.18527,-23.527,2.18E-122,{"v":2.71e-119,"d":"2.71E-119"},"full_name=PS II oxygen-evolving complex 1. PS II oxygen-evolving complex 1. Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In <i>Arabidopsis thaliana</i> the PsbO proteins are encoded by two genes: <i>psbO1</i> and <i>psbO2</i>. PsbO1 is the major isoform in the wild-type. In plsp1-1 mutant plastids, the nonmature form of the protein localizes in the membrane.","AT5G22460",null,1407.6,4.1775,0.19789,21.11,{"v":6.39e-99,"d":"6.39E-99"},{"v":7.71e-96,"d":"7.71E-96"},"alpha/beta-Hydrolases superfamily protein.","AT4G21960","PRXR1",2462.5,-4.4353,0.14234,-31.159,{"v":3.77e-213,"d":"3.77E-213"},{"v":4.4e-210,"d":"4.40E-210"},"Peroxidase superfamily protein. Encodes AT4g21960 (AT4g21960/T8O5_170).","AT5G40420","OLEO2",54317,-1.2442,0.052432,-23.731,{"v":1.74e-124,"d":"1.74E-124"},{"v":1.98e-121,"d":"1.98E-121"},"full_name=oleosin 2. oleosin 2. Encodes oleosin2, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.","AT1G75240","HB33",269.99,-0.86242,0.18731,-4.6043,{"v":4.14e-06,"d":"4.14E-06"},0.002574,"full_name=homeobox protein 33. homeobox protein 33. Encodes a zinc finger-homeodomain transcription factor ZHD5. Nuclear import and DNA binding of the ZHD5 transcription factor is modulated by a competitive peptide inhibitor MIF1 (AT1G74660).","AT3G07820",null,96.322,1.3518,0.2985,4.5287,{"v":5.94e-06,"d":"5.94E-06"},0.006751,"Pectin lyase-like superfamily protein."]
["AT4G20390","CASPL1B2",923.6,-3.8924,0.14564,-26.726,{"v":2.33e-157,"d":"2.33E-157"},{"v":2.79e-154,"d":"2.79E-154"},"Uncharacterized protein family (UPF0497).","AT1G06680","PSBP-1",426.1,-4.1945,0.17912,-23.418,{"v":2.8e-121,"d":"2.80E-121"},{"v":3.26e-118,"d":"3.26E-118"},"full_name=photosystem II subunit P-1. photosystem II subunit P-1. Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution. Phosphorylation of this protein is dependent on calcium. In plsp1-1 mutant plastids, the nonmature form of the protein localizes in the stroma.","AT5G15960","KIN1",963.52,-3.1258,0.14863,-21.031,{"v":3.43e-98,"d":"3.43E-98"},{"v":3.87e-95,"d":"3.87E-95"},"stress-responsive protein (KIN1) / stress-induced protein (KIN1). cold and ABA inducible protein kin1, possibly functions as an anti-freeze protein. Transcript level of this gene is induced by cold, ABA, dehydration and osmoticum (mannitol). However, protein activity of GUS fused to the promoter of this gene is inhibited by cold treatment, suggesting an inhibition of the protein by increased transcript level.","AT1G17430",null,1097.6,-3.3512,0.11518,-29.096,{"v":3.98e-186,"d":"3.98E-186"},{"v":4.33e-183,"d":"4.33E-183"},"alpha/beta-Hydrolases superfamily protein.","AT4G31800","WRKY18",542.47,3.4892,0.1477,23.624,{"v":2.17e-123,"d":"2.17E-123"},{"v":2.31e-120,"d":"2.31E-120"},"full_name=WRKY DNA-binding protein 18. WRKY DNA-binding protein 18. Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Constitutive expression of WRKY18 enhanced resistance to P. syringae, but its coexpression with WRKY40 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two.","AT3G48930","EMB1080",1046.2,-0.54209,0.12172,-4.4535,{"v":8.45e-06,"d":"8.45E-06"},0.004904,"full_name=embryo defective 1080. Nucleic acid-binding, OB-fold-like protein.","AT5G53220",null,1061.2,-0.45518,0.10178,-4.4722,{"v":7.74e-06,"d":"7.74E-06"},0.007768,"hypothetical protein."]
["AT4G14440","HCD1",748.08,-3.4927,0.1312,-26.621,{"v":3.9e-156,"d":"3.90E-156"},{"v":4.38e-153,"d":"4.38E-153"},"full_name=3-hydroxyacyl-CoA dehydratase 1. 3-hydroxyacyl-CoA dehydratase 1. encodes a cytosolic delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation","AT2G03520","UPS4",399.96,4.0373,0.17392,23.213,{"v":3.33e-119,"d":"3.33E-119"},3.63E-116,"full_name=ureide permease 4. ureide permease 4. Encodes AtUPS4, a member of the Arabidopsis ureide permease family.","AT3G53040",null,13950,3.721,0.178,20.904,{"v":4.93e-97,"d":"4.93E-97"},{"v":5.21e-94,"d":"5.21E-94"},"late embryogenesis abundant protein, putative / LEA protein.","AT2G23240","AtMT4b",7865.7,2.9399,0.10332,28.454,{"v":4.32e-178,"d":"4.32E-178"},{"v":4.41e-175,"d":"4.41E-175"},"full_name=Arabidopsis thaliana metallothionein 4b. Plant EC metallothionein-like protein, family 15. AtMT4b is a member of Type 4 metallothionein (MT) genes. It is involved in the early develoment of the embryo and in the accumulation of metal ions especially Zn in the seeds.","AT2G16586",null,1135.8,2.1866,0.097909,22.333,1.77E-110,{"v":1.76e-107,"d":"1.76E-107"},"transmembrane protein.","AT1G53540","HSP17.6C",1190.6,0.39736,0.091333,4.3507,{"v":1.36E-5,"d":"1.36E-05"},0.007386,"HSP20-like chaperones superfamily protein.","AT1G03220","SAP2",1441,0.38663,0.086485,4.4705,{"v":7.81e-06,"d":"7.81E-06"},0.007768,"Eukaryotic aspartyl protease family protein."]
["AT1G73290","scpl5",997.37,-3.6933,0.13943,-26.489,{"v":1.29e-154,"d":"1.29E-154"},{"v":1.36e-151,"d":"1.36E-151"},"full_name=serine carboxypeptidase-like 5. serine carboxypeptidase-like 5.","AT5G06760","LEA4-5",2901.2,2.3731,0.10272,23.103,{"v":4.33e-118,"d":"4.33E-118"},{"v":4.44e-115,"d":"4.44E-115"},"full_name=Late Embryogenesis Abundant 4-5. Late Embryogenesis Abundant 4-5. Encodes LEA4-5, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment. Most of the diverse set of LEA proteins can be grouped according to properties such as high hydrophilicity and high content of glycine or other small amino acids in what has been termed hydrophilins. LEA4-5 protects enzyme activities from the adverse effects induced by freeze-thaw cycles in vitro.","AT2G34740",null,407.52,6.0551,0.29975,20.2,{"v":9.76e-91,"d":"9.76E-91"},{"v":9.7e-88,"d":"9.70E-88"},"protein phosphatase 2C family protein.","AT5G09530","PELPK1",957.29,-5.8228,0.21502,-27.08,{"v":1.71e-161,"d":"1.71E-161"},{"v":1.64e-158,"d":"1.64E-158"},"full_name=Pro-Glu-Leu|Ile|Val-Pro-Lys 1. hydroxyproline-rich glycoprotein family protein. The gene encodes a unique protein which contains 36 repeats of a unique pentapeptide (Pro-Glu-Leu|Ile|Val-Pro-Lys). It has been shown tobe involved in growth and development.","AT5G58070","TIL",4190.7,-1.5527,0.070365,-22.067,{"v":6.58e-108,"d":"6.58E-108"},{"v":6.16e-105,"d":"6.16E-105"},"full_name=temperature-induced lipocalin. temperature-induced lipocalin. Encodes a temperature-induced lipocalin TIL1. Involved in thermotolerance. Peripherally associated with plasma membrane.","AT5G12030","HSP17.6A",40310,0.24662,0.05707,4.3213,{"v":1.55e-05,"d":"1.55E-05"},0.00752,"full_name=heat shock protein 17.6A. heat shock protein 17.6A. Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development.","AT5G07430",null,62.566,1.4768,0.33185,4.4501,{"v":8.58e-06,"d":"8.58E-06"},0.008039,"Pectin lyase-like superfamily protein."]
["AT2G23540",null,2187.9,-3.2967,0.1293,-25.496,{"v":2.16e-143,"d":"2.16E-143"},{"v":2.16e-140,"d":"2.16E-140"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT1G71691",null,527.88,-4.1182,0.17878,-23.035,{"v":2.1e-117,"d":"2.10E-117"},{"v":2.03e-114,"d":"2.03E-114"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT2G47770","TSPO",2678.9,2.9162,0.14454,20.176,1.58E-90,{"v":1.49e-87,"d":"1.49E-87"},"full_name=TSPO(outer membrane tryptophan-rich sensory protein)-related. TSPO(outer membrane tryptophan-rich sensory protein)-like protein. Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks. It is degraded through the autophagy pathway.","AT2G38900",null,1090,-3.8261,0.14172,-26.998,1.58E-160,1.43E-157,"Serine protease inhibitor, potato inhibitor I-type family protein. Predicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860.","AT2G40140","CZF1",1279,2.3616,0.10744,21.98,{"v":4.44e-107,"d":"4.44E-107"},3.92E-104,"zinc finger (CCCH-type) family protein.","AT1G49600","RBP47A",1273.6,-0.56414,0.13056,-4.3208,{"v":1.55e-05,"d":"1.55E-05"},0.00752,"full_name=RNA-binding protein 47A. RNA-binding protein 47A."]
["AT5G54270","LHCB3",1317.7,-3.4426,0.13537,-25.432,{"v":1.11e-142,"d":"1.11E-142"},1.05E-139,"full_name=light-harvesting chlorophyll B-binding protein 3. light-harvesting chlorophyll B-binding protein 3. Lhcb3 protein is a component of the main light harvesting chlorophyll a/b-protein complex of Photosystem II (LHC II).","AT1G61520","LHCA3",398.67,-4.4489,0.19786,-22.485,{"v":5.78e-112,"d":"5.78E-112"},{"v":5.31e-109,"d":"5.31E-109"},"full_name=photosystem I light harvesting complex gene 3. PSI type III chlorophyll a/b-binding protein. PSI type III chlorophyll a/b-binding protein (Lhca3*1)","AT2G03520","UPS4",2614.3,2.837,0.14088,20.138,{"v":3.42e-90,"d":"3.42E-90"},{"v":3.04e-87,"d":"3.04E-87"},"full_name=ureide permease 4. ureide permease 4. Encodes AtUPS4, a member of the Arabidopsis ureide permease family.","AT2G40460",null,1247.6,-5.4332,0.20587,-26.391,1.72E-153,1.48E-150,"Major facilitator superfamily protein.","AT5G02020","SIS",2750.3,2.0917,0.097362,21.484,{"v":2.21e-102,"d":"2.21E-102"},{"v":1.85e-99,"d":"1.85E-99"},"full_name=Salt Induced Serine rich. E3 ubiquitin-protein ligase RLIM-like protein. Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).","AT5G12020","HSP17.6II",171.22,0.78571,0.18292,4.2953,{"v":1.74e-05,"d":"1.74E-05"},0.007997,"full_name=17.6 kDa class II heat shock protein. 17.6 kDa class II heat shock protein."]
["AT1G68850",null,948.37,-3.4918,0.13785,-25.33,{"v":1.48e-141,"d":"1.48E-141"},1.33E-138,"Peroxidase superfamily protein.","AT1G55360",null,1622.1,-2.4253,0.10792,-22.473,{"v":7.65e-112,"d":"7.65E-112"},{"v":6.66e-109,"d":"6.66E-109"},"tRNA-splicing ligase (DUF239).","AT3G10040","HRA1",463.23,-3.5831,0.17797,-20.134,{"v":3.73e-90,"d":"3.73E-90"},{"v":3.15e-87,"d":"3.15E-87"},"sequence-specific DNA binding transcription factor. Encodes HRA1 (HYPOXIA RESPONSE ATTENUATOR1), a low oxygen-inducible transcription factor.","AT1G33700",null,506.15,-5.2221,0.20125,-25.948,{"v":1.91e-148,"d":"1.91E-148"},1.56E-145,"Beta-glucosidase, GBA2 type family protein.","AT1G03220","SAP2",551.84,3.5427,0.16719,21.19,1.19E-99,{"v":9.5e-97,"d":"9.50E-97"},"Eukaryotic aspartyl protease family protein.","AT2G41840",null,2245,-0.51836,0.12149,-4.2667,{"v":1.98E-5,"d":"1.98E-05"},0.008227,"Ribosomal protein S5 family protein."]
["AT4G36610",null,1121.2,-2.6373,0.10532,-25.04,2.27E-138,{"v":1.94e-135,"d":"1.94E-135"},"alpha/beta-Hydrolases superfamily protein.","AT1G15820","LHCB6",335.57,-4.634,0.21141,-21.92,1.69E-106,{"v":1.4e-103,"d":"1.40E-103"},"full_name=light harvesting complex photosystem II subunit 6. light harvesting complex photosystem II subunit 6. Lhcb6 protein (Lhcb6), light harvesting complex of photosystem II.","AT1G64110","DAA1",1103.5,3.3982,0.16883,20.128,{"v":4.17e-90,"d":"4.17E-90"},{"v":3.36e-87,"d":"3.36E-87"},"full_name=DUO1-activated ATPase 1. P-loop containing nucleoside triphosphate hydrolases superfamily protein. Target promoter of the male germline-specific transcription factor DUO1.","AT3G02480","ABR",5804.9,-2.7511,0.10604,-25.943,2.17E-148,{"v":1.69e-145,"d":"1.69E-145"},"Late embryogenesis abundant protein (LEA) family protein.","AT5G03240","UBQ3",6491.2,1.4192,0.067829,20.924,3.27E-97,{"v":2.48e-94,"d":"2.48E-94"},"full_name=polyubiquitin 3. polyubiquitin 3. encodes ubiquitin that is attached to proteins destined for degradation. UBQ3 is most homologous with UBQ4, and is expressed in higher levels in vegetative tissue but lower levels in flowers than UBQ4. UBQ3 encodes different number of ubiquitins in different ecotypes. UBQ3 transcript level is modulated by UV-B and light/dark treatments.","AT4G15000",null,1048,-0.45361,0.10631,-4.2667,{"v":1.98E-5,"d":"1.98E-05"},0.008227,"Ribosomal L27e protein family."]
["AT5G01530","LHCB4.1",1328.4,-2.5435,0.10288,-24.723,{"v":6.08e-135,"d":"6.08E-135"},{"v":4.98e-132,"d":"4.98E-132"},"full_name=light harvesting complex photosystem II. light harvesting complex photosystem II.","AT3G05260",null,2588.3,2.7709,0.12762,21.712,{"v":1.59e-104,"d":"1.59E-104"},1.26E-101,"NAD(P)-binding Rossmann-fold superfamily protein.","AT5G66430",null,676.08,3.9011,0.19633,19.87,{"v":7.34e-88,"d":"7.34E-88"},{"v":5.64e-85,"d":"5.64E-85"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT5G13170","SAG29",584.64,-5.5425,0.21465,-25.821,{"v":5.18e-147,"d":"5.18E-147"},3.85E-144,"full_name=senescence-associated gene 29. senescence-associated gene 29. Encodes a member of the SWEET sucrose efflux transporter family proteins.","AT1G53540","HSP17.6C",2364.4,-2.1984,0.10639,-20.663,{"v":7.44e-95,"d":"7.44E-95"},{"v":5.39e-92,"d":"5.39E-92"},"HSP20-like chaperones superfamily protein.","AT2G47610",null,1938.4,-0.47702,0.11214,-4.2537,{"v":2.1e-05,"d":"2.10E-05"},0.008323,"Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein."]
["AT5G66570","PSBO1",2557.9,-2.3279,0.095358,-24.412,{"v":1.28e-131,"d":"1.28E-131"},{"v":9.98e-129,"d":"9.98E-129"},"full_name=PS II oxygen-evolving complex 1. PS II oxygen-evolving complex 1. Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In <i>Arabidopsis thaliana</i> the PsbO proteins are encoded by two genes: <i>psbO1</i> and <i>psbO2</i>. PsbO1 is the major isoform in the wild-type. In plsp1-1 mutant plastids, the nonmature form of the protein localizes in the membrane.","AT1G14940",null,7946.6,2.3967,0.11074,21.642,{"v":7.19e-104,"d":"7.19E-104"},{"v":5.45e-101,"d":"5.45E-101"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein.","AT4G12400","Hop3",444.69,3.6036,0.18516,19.462,{"v":2.3e-84,"d":"2.30E-84"},1.69E-81,"full_name=Hop3. stress-inducible protein. Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","AT2G38530","LTP2",4017.3,-2.9273,0.11401,-25.676,2.16E-145,{"v":1.53e-142,"d":"1.53E-142"},"full_name=lipid transfer protein 2. lipid transfer protein 2. Involved in lipid transfer between membranes. Belongs to a family of Lipid transfer proteins. Sequence similarity to other plant/Arabidopsis LPT genes but highest similarity to LPT1. Stress and pathogen-inducible motifs found in the upstream region. Expressed in flower, leaves and siliques but absent in roots. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.","AT5G21280","ATR7",1165.7,1.8728,0.091106,20.556,{"v":6.78e-94,"d":"6.78E-94"},{"v":4.69e-91,"d":"4.69E-91"},"hydroxyproline-rich glycoprotein family protein.","AT3G11510",null,743.56,-0.5898,0.14023,-4.2059,{"v":2.6e-05,"d":"2.60E-05"},0.009845,"Ribosomal protein S11 family protein."]
["AT1G08380","PSAO",791.85,-2.9811,0.12313,-24.211,1.69E-129,{"v":1.27e-126,"d":"1.27E-126"},"full_name=photosystem I subunit O. photosystem I subunit O. Encodes subunit O of photosystem I.","AT5G15530","BCCP2",1229.7,-2.3828,0.11069,-21.527,{"v":8.7e-103,"d":"8.70E-103"},{"v":6.32e-100,"d":"6.32E-100"},"full_name=biotin carboxyl carrier protein 2. biotin carboxyl carrier protein 2. biotin carboxyl carrier protein isoform 2 (BCCP2) mRNA,","AT1G30070",null,511.79,2.6856,0.13842,19.402,{"v":7.47e-84,"d":"7.47E-84"},{"v":5.26e-81,"d":"5.26E-81"},"SGS domain-containing protein.","AT3G61990","OMTF3",657.18,3.5827,0.13957,25.669,{"v":2.6E-145,"d":"2.60E-145"},{"v":1.77e-142,"d":"1.77E-142"},"full_name=O-MTase family 3 protein. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. Encodes a protein methyltransferase. Involved in the methylation of plant transmembrane proteins.","AT3G63040",null,791.51,-2.7024,0.13233,-20.421,1.08E-92,7.16E-90,"hypothetical protein."]
["AT5G39190","GER2",2550.1,-2.7317,0.11656,-23.436,{"v":1.86e-121,"d":"1.86E-121"},{"v":1.34e-118,"d":"1.34E-118"},"full_name=germin-like protein 2. germin-like protein 2. germin-like protein (GLP2a)","AT4G00380","FDM2",857.84,-2.4456,0.11434,-21.389,1.68E-101,1.17E-98,"full_name=factor of DNA methylation 2. XH/XS domain-containing protein. Belongs to a subgroup of SGS3-like proteins that act redundantly in RNA-directed DNA methylation: AT1G15910 (FDM1), AT4G00380 (FDM2), AT3G12550 (FDM3), AT1G13790 (FDM4), AT1G80790 (FDM5).","AT3G58450","USP",9944.3,2.0705,0.10766,19.232,{"v":2.02e-82,"d":"2.02E-82"},1.36E-79,"Adenine nucleotide alpha hydrolases-like superfamily protein.","AT5G56540","AGP14",733.01,-6.0294,0.23622,-25.525,1.04E-143,{"v":6.82e-141,"d":"6.82E-141"},"full_name=arabinogalactan protein 14. arabinogalactan protein 14. Encodes arabinogalactan protein (AGP14). Mutants exhibit longer root hairs.","AT2G19310","HSP18.5",1321.7,-2.0827,0.10288,-20.244,{"v":4.04e-91,"d":"4.04E-91"},{"v":2.57e-88,"d":"2.57E-88"},"HSP20-like chaperones superfamily protein."]
["AT2G34870","MEE26",1445.4,-3.2547,0.13895,-23.423,{"v":2.47e-121,"d":"2.47E-121"},{"v":1.71e-118,"d":"1.71E-118"},"full_name=maternal effect embryo arrest 26. hydroxyproline-rich glycoprotein family protein.","AT1G54870",null,21471,2.4167,0.11376,21.243,{"v":3.85e-100,"d":"3.85E-100"},{"v":2.58e-97,"d":"2.58E-97"},"NAD(P)-binding Rossmann-fold superfamily protein. ChlADR is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on saturated and alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. The N-terminal region of this protein directs GFP to the chloroplast where where ChlADR likely helps to maintain the photosynthetic process by detoxifying reactive carbonyls formed during lipid peroxidation. In addition, this enzyme can also reduce cis-3-hexenal, a major plant volatile compound that contributes to green leaf odor, as well as methylglyoxal in vitro.","AT1G74670","GASA6",355.94,-3.5093,0.18279,-19.199,{"v":3.79e-82,"d":"3.79E-82"},2.46E-79,"full_name=GA-stimulated Arabidopsis 6. Gibberellin-regulated family protein.","AT2G02120","PDF2.1",21954,-1.7255,0.067632,-25.513,1.43E-143,{"v":8.97e-141,"d":"8.97E-141"},"Scorpion toxin-like knottin superfamily protein. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","AT2G28490",null,42702,-1.2216,0.061481,-19.869,{"v":7.5e-88,"d":"7.50E-88"},{"v":4.6e-85,"d":"4.60E-85"},"RmlC-like cupins superfamily protein."]
["AT1G30700","ATBBE8",515.58,3.787,0.16225,23.34,{"v":1.72e-120,"d":"1.72E-120"},1.15E-117,"FAD-binding Berberine family protein.","AT5G52300","LTI65",1763.1,2.82,0.13308,21.19,{"v":1.18e-99,"d":"1.18E-99"},{"v":7.6e-97,"d":"7.60E-97"},"full_name=LOW-TEMPERATURE-INDUCED 65. CAP160 protein. encodes a protein that is induced in expression in response to water deprivation such as cold, high-salt, and dessication. The response appears to be via abscisic acid. The promoter region contains two ABA-responsive elements (ABREs) that are required for the dehydration-responsive expression of rd29B as cis-acting elements. Protein is a member of a gene family with other members found plants, animals and fungi.","AT2G32120","HSP70T-2",1454.7,3.0012,0.15687,19.131,1.38E-81,{"v":8.65e-79,"d":"8.65E-79"},"full_name=heat-shock protein 70T-2. heat-shock protein 70T-2.","AT4G39800","MIPS1",2025.7,-2.5735,0.10125,-25.418,{"v":1.58e-142,"d":"1.58E-142"},{"v":9.55e-140,"d":"9.55E-140"},"full_name=D-myo-Inositol 3-Phosphate Synthase 1. myo-inositol-1-phosphate synthase 1. ** Referred to as MIPS2 in Mitsuhashi et al 2008. myo-inositol-1-phosphate synthase isoform 1.Expressed in leaf, root and silique. Immunolocalization experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.","AT2G43820","UGT74F2",1895.5,2.1783,0.11053,19.707,{"v":1.86e-86,"d":"1.86E-86"},{"v":1.1E-83,"d":"1.10E-83"},"full_name=UDP-glucosyltransferase 74F2. UDP-glucosyltransferase 74F2. Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE."]
["AT1G29930","CAB1",5958,-2.8271,0.12411,-22.779,{"v":7.46e-115,"d":"7.46E-115"},{"v":4.79e-112,"d":"4.79E-112"},"full_name=chlorophyll A/B binding protein 1. chlorophyll A/B binding protein 1. Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.","AT5G51210","OLEO3",3810.8,-1.8575,0.088542,-20.979,1.02E-97,{"v":6.32e-95,"d":"6.32E-95"},"full_name=oleosin3. oleosin3. Encodes oleosin3, a protein found in oil bodies, involved in seed lipid accumulation.","AT2G42560","LEA25",21654,2.9924,0.15829,18.904,{"v":1.06e-79,"d":"1.06E-79"},{"v":6.37e-77,"d":"6.37E-77"},"late embryogenesis abundant domain-containing protein / LEA domain-containing protein.","AT5G11740","AGP15",499.94,-4.8708,0.19675,-24.756,{"v":2.68e-135,"d":"2.68E-135"},{"v":1.56e-132,"d":"1.56E-132"},"full_name=arabinogalactan protein 15. arabinogalactan protein 15. Encodes arabinogalactan protein (AGP15).","AT5G48180","NSP5",1310.5,-1.7177,0.087413,-19.65,5.79E-86,{"v":3.29e-83,"d":"3.29E-83"},"full_name=nitrile specifier protein 5. nitrile specifier protein 5. Encodes a nitrile-specifier protein NSP5. NSP5 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation."]
["AT1G01610","GPAT4",620.3,-2.8185,0.12383,-22.761,{"v":1.12e-114,"d":"1.12E-114"},{"v":6.96e-112,"d":"6.96E-112"},"full_name=GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 4. glycerol-3-phosphate acyltransferase 4. bifunctional sn-glycerol-3-phosphate 2-O-acyltransferase/phosphatase. Involved in cutin assembly and is functionally redundant with GPAT8.","AT5G66400","RAB18",12164,2.614,0.12745,20.51,{"v":1.77e-93,"d":"1.77E-93"},{"v":1.06e-90,"d":"1.06E-90"},"full_name=RESPONSIVE TO ABA 18. Dehydrin family protein. Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. ABA- and drought-induced glycine-rice dehydrin protein. The ABA-induced expression of RAB18 was reduced following ACC application, indicating that ethylene inhibits the ABA signaling pathway. RAB18 is also expressed in response to the formation of the phospholipid diacylglycerol pyrophosphate. COR47 and RAB18 double overexpressor plants are cold tolerant. Expressed in guard cells.","AT2G43580",null,389.93,4.0982,0.21743,18.848,{"v":3.03e-79,"d":"3.03E-79"},{"v":1.76e-76,"d":"1.76E-76"},"Chitinase family protein.","AT1G62290","PASPA2",4389.2,-2.6874,0.10893,-24.671,2.17E-134,{"v":1.22e-131,"d":"1.22E-131"},"Saposin-like aspartyl protease family protein.","AT5G06750","APD8",993.05,2.4279,0.12376,19.617,{"v":1.1E-85,"d":"1.10E-85"},6.04E-83,"Protein phosphatase 2C family protein."]
["AT3G61470","LHCA2",1405.2,-2.3988,0.10599,-22.631,{"v":2.13e-113,"d":"2.13E-113"},{"v":1.28e-110,"d":"1.28E-110"},"full_name=photosystem I light harvesting complex gene 2. photosystem I light harvesting complex protein. Encodes a component of the light harvesting antenna complex of photosystem I.","AT3G47470","LHCA4",444.9,-2.9275,0.14323,-20.439,{"v":7.59e-93,"d":"7.59E-93"},{"v":4.41e-90,"d":"4.41E-90"},"full_name=light-harvesting chlorophyll-protein complex I subunit A4. light-harvesting chlorophyll-protein complex I subunit A4. Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins.","AT5G55135",null,297.31,4.706,0.24992,18.83,{"v":4.31e-79,"d":"4.31E-79"},2.43E-76,"hypothetical protein.","AT5G24950","CYP71A15",1443.4,-2.5914,0.10538,-24.591,1.56E-133,{"v":8.5e-131,"d":"8.50E-131"},"full_name=cytochrome P450, family 71, subfamily A, polypeptide 15. cytochrome P450, family 71, subfamily A, polypeptide 15. putative cytochrome P450","AT2G32120","HSP70T-2",5458,-1.1558,0.059454,-19.44,{"v":3.51e-84,"d":"3.51E-84"},{"v":1.86e-81,"d":"1.86E-81"},"full_name=heat-shock protein 70T-2. heat-shock protein 70T-2."]
["AT2G18570",null,791.92,2.5252,0.11456,22.043,1.12E-107,{"v":6.5e-105,"d":"6.50E-105"},"UDP-Glycosyltransferase superfamily protein.","AT3G46230","HSP17.4",649.15,3.7074,0.18453,20.091,{"v":8.91e-90,"d":"8.91E-90"},{"v":5.01e-87,"d":"5.01E-87"},"full_name=heat shock protein 17.4. heat shock protein 17.4. member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds","AT4G36600",null,1892.5,3.5572,0.18962,18.76,{"v":1.61e-78,"d":"1.61E-78"},{"v":8.78e-76,"d":"8.78E-76"},"Late embryogenesis abundant (LEA) protein.","AT2G25770",null,444.07,-4.0394,0.16446,-24.561,{"v":3.29e-133,"d":"3.29E-133"},{"v":1.73e-130,"d":"1.73E-130"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein.","AT4G31590","CSLC5",947.24,-1.5844,0.083171,-19.05,{"v":6.61e-81,"d":"6.61E-81"},{"v":3.39e-78,"d":"3.39E-78"},"full_name=Cellulose-synthase-like C5. Cellulose-synthase-like C5. encodes a gene similar to cellulose synthase"]
["AT5G39160",null,2284.3,-2.6994,0.12297,-21.953,{"v":8.14e-107,"d":"8.14E-107"},{"v":4.58e-104,"d":"4.58E-104"},"RmlC-like cupins superfamily protein.","AT3G21055","PSBTN",278.23,-5.2363,0.26262,-19.938,1.89E-88,1.03E-85,"full_name=photosystem II subunit T. photosystem II subunit T. Encodes photosystem II 5 kD protein subunit PSII-T. This is a nuclear-encoded gene (PsbTn) which also has a plastid-encoded paralog (PsbTc).","AT2G24270","ALDH11A3",351.21,-3.6494,0.19548,-18.669,{"v":8.84e-78,"d":"8.84E-78"},4.67E-75,"full_name=aldehyde dehydrogenase 11A3. aldehyde dehydrogenase 11A3. Encodes a protein with non-phosphorylating NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity. The activity of the enzyme was determined from leaf extracts; the enzyme has not been purified to confirm activity.","AT1G11170",null,1444.9,-2.5166,0.10521,-23.919,{"v":1.95e-126,"d":"1.95E-126"},{"v":9.96e-124,"d":"9.96E-124"},"lysine ketoglutarate reductase trans-splicing-like protein (DUF707).","AT4G27140","SESA1",34840,-2.2136,0.11909,-18.588,{"v":4.01e-77,"d":"4.01E-77"},{"v":1.99e-74,"d":"1.99E-74"},"full_name=seed storage albumin 1. seed storage albumin 1."]
["AT1G28400",null,3131.4,-2.4537,0.1118,-21.947,{"v":9.3E-107,"d":"9.30E-107"},{"v":5.07e-104,"d":"5.07E-104"},"GATA zinc finger protein.","AT2G42560","LEA25",3149.4,3.1863,0.15993,19.924,{"v":2.54e-88,"d":"2.54E-88"},{"v":1.34e-85,"d":"1.34E-85"},"late embryogenesis abundant domain-containing protein / LEA domain-containing protein.","AT5G54070","HSFA9",863.16,3.9897,0.21382,18.659,{"v":1.06e-77,"d":"1.06E-77"},{"v":5.43e-75,"d":"5.43E-75"},"full_name=heat shock transcription factor A9. heat shock transcription factor A9. A member of Heat Stress Transcription Factor (Hsf) family. Not responding to heat stress. Is regulated by the seed-specific transcription factor ABI3. In turn, it regulates other heat stress proteins including Hsp17.4-CI, Hsp17.7-CII and Hsp101 during seed maturation.","AT4G37050","PLP4",863.07,-3.2648,0.138,-23.659,{"v":9.59e-124,"d":"9.59E-124"},{"v":4.75e-121,"d":"4.75E-121"},"full_name=PATATIN-like protein 4. PATATIN-like protein 4. Patatin-related phospholipase A. Expressed in the floral gynaecium and is induced by abscisic acid (ABA) or phosphate deficiency in roots.","AT4G26740","ATS1",15703,-1.5758,0.085474,-18.435,{"v":6.82e-76,"d":"6.82E-76"},{"v":3.29e-73,"d":"3.29E-73"},"full_name=seed gene 1. peroxygenase 1. Encodes caleosin, a 27-kDa protein found within seed lipid bodies. Gene is expressed preferentially in the embryo, has similarity to a rice ABA-responsive gene, EFA27. Catalyze hydroperoxide-dependent mono-oxygenation reactions. Require calcium for peroxygenase activity. Probably deeply buried in lipid droplets or microsomes."]
["AT5G12420","WSD7",655.55,-3.5033,0.15971,-21.935,1.19E-106,{"v":6.31e-104,"d":"6.31E-104"},"O-acyltransferase (WSD1-like) family protein.","AT1G18100","E12A11",1426,-2.1736,0.10917,-19.911,{"v":3.29e-88,"d":"3.29E-88"},{"v":1.69e-85,"d":"1.69E-85"},"PEBP (phosphatidylethanolamine-binding protein) family protein. Encodes a member of the FT and TFL1 family of phosphatidylethanolamine-binding proteins. It is expressed in seeds and up-regulated in response to ABA. Loss of function mutants show decreased rate of germination in the presence of ABA. ABA dependent regulation is mediated by both ABI3 and ABI5. ABI5 promotes MFT expression, primarily in the radicle-hypocotyl transition zone and ABI3 suppresses it in the seed.","AT1G52560","HSP26.5",263.55,4.7872,0.2566,18.656,{"v":1.12e-77,"d":"1.12E-77"},{"v":5.57e-75,"d":"5.57E-75"},"HSP20-like chaperones superfamily protein.","AT3G22120","CWLP",877.23,-4.3422,0.18465,-23.515,{"v":2.84e-122,"d":"2.84E-122"},1.36E-119,"full_name=cell wall-plasma membrane linker protein. cell wall-plasma membrane linker protein. cell wall-plasma membrane linker protein homolog (CWLP)","AT3G48580","XTH11",624.27,-2.5061,0.13738,-18.242,2.38E-74,{"v":1.11e-71,"d":"1.11E-71"},"full_name=xyloglucan endotransglucosylase/hydrolase 11. xyloglucan endotransglucosylase/hydrolase 11."]
["AT5G54740","SESA5",64175,2.13,0.098079,21.717,{"v":1.42e-104,"d":"1.42E-104"},{"v":7.29e-102,"d":"7.29E-102"},"full_name=seed storage albumin 5. seed storage albumin 5.","AT5G39720","AIG2L",995.68,3.1595,0.16086,19.641,{"v":6.92e-86,"d":"6.92E-86"},{"v":3.45e-83,"d":"3.45E-83"},"full_name=avirulence induced gene 2 like protein. avirulence induced protein 2 like protein.","AT4G27530",null,2043.2,3.0581,0.16406,18.64,1.52E-77,{"v":7.33e-75,"d":"7.33E-75"},"hypothetical protein.","AT5G50750","RGP4",503.33,-5.0748,0.21844,-23.232,2.18E-119,1.02E-116,"full_name=reversibly glycosylated polypeptide 4. reversibly glycosylated polypeptide 4. RGP4 is a reversibly glycosylated polypeptide. Analyses using tagged RGP4 suggest that it is present in the cytosol and in association with the Golgi apparatus. Recombinant RGP4 does not have UDP-arabinose mutase activity based on an in vitro assay even though the related RGP1, RGP2, and RGP3 proteins do have activity in the same assay. RGP4 can form complexes with RGP1 and RGP2. RGP4 is expressed during seed development.","AT2G01450","MPK17",4877.5,1.3218,0.072872,18.138,1.59E-73,{"v":7.25e-71,"d":"7.25E-71"},"full_name=MAP kinase 17. MAP kinase 17. member of MAP Kinase"]
["AT1G29920","CAB2",1091,-3.0355,0.13999,-21.683,{"v":2.95e-104,"d":"2.95E-104"},{"v":1.47e-101,"d":"1.47E-101"},"full_name=chlorophyll A/B-binding protein 2. chlorophyll A/B-binding protein 2. Encodes lhcb1.1 a component of the LHCIIb light harvesting complex associated with photosystem II.","AT1G20340","DRT112",246.93,-4.0728,0.20875,-19.511,{"v":8.94e-85,"d":"8.94E-85"},{"v":4.33e-82,"d":"4.33E-82"},"full_name=DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112. Cupredoxin superfamily protein. recombination and DNA-damage resistance protein (DRT112) One of two Arabidopsis plastocyanin genes. Predominant form, expressed 10x higher than PETE1. PETE2 is thought to be post-transcriptionally regulated via copper accumulation and is involved in copper homeostasis. Mutation of this gene does not have obvious effect on photosynthesis. In plsp1-1 mutant plastids, the nonmature form of the protein localizes in the membrane.","AT4G25980",null,260.87,-4.1716,0.22384,-18.637,1.61E-77,{"v":7.57e-75,"d":"7.57E-75"},"peroxidase superfamily protein.","AT5G41040","RWP1",500.14,-6.0327,0.26075,-23.136,{"v":2.02e-118,"d":"2.02E-118"},{"v":9.16e-116,"d":"9.16E-116"},"full_name=REDUCED LEVELS OF WALL-BOUND PHENOLICS 1. HXXXD-type acyl-transferase family protein. Encodes a feruloyl-CoA transferase required for suberin synthesis. Has feruloyl-CoA-dependent feruloyl transferase activity towards substrates with a primary alcohol.","AT5G48850","ATSDI1",601.24,-3.1418,0.17496,-17.957,{"v":4.24e-72,"d":"4.24E-72"},{"v":1.88e-69,"d":"1.88E-69"},"full_name=SULPHUR DEFICIENCY-INDUCED 1. Tetratricopeptide repeat (TPR)-like superfamily protein. homologous to the wheat sulphate deficiency-induced gene sdi1. Expression in root and leaf is induced by sulfur starvation. Knockout mutants retained higher root and leaf sulfate concentrations, indicating a role in regulation of stored sulfate pools."]
["AT3G61880","CYP78A9",4632,3.1083,0.1448,21.466,{"v":3.24e-102,"d":"3.24E-102"},{"v":1.58e-99,"d":"1.58E-99"},"full_name=cytochrome p450 78a9. cytochrome p450 78a9. Encodes a cytochrome p450 monooxygenase. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis.","AT1G32060","PRK",498.24,-2.9635,0.1521,-19.484,1.51E-84,7.09E-82,"full_name=phosphoribulokinase. phosphoribulokinase.","AT4G09610","GASA2",5014.7,1.9816,0.10651,18.604,{"v":2.97e-77,"d":"2.97E-77"},{"v":1.36e-74,"d":"1.36E-74"},"full_name=GAST1 protein homolog 2. GAST1 protein homolog 2.","AT1G62380","ACO2",1394.7,-4.495,0.19433,-23.131,{"v":2.27e-118,"d":"2.27E-118"},{"v":1e-115,"d":"1.00E-115"},"full_name=ACC oxidase 2. ACC oxidase 2. Encodes a protein similar to 1-aminocyclopropane-1-carboxylic oxidase (ACC oxidase). Expression of the AtACO2 transcripts is affected by ethylene.","AT4G25140","OLEO1",151380,-1.1993,0.066827,-17.946,{"v":5.16e-72,"d":"5.16E-72"},2.22E-69,"full_name=oleosin 1. oleosin 1. Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds."]
["AT5G13580","ABCG6",361.96,-3.5009,0.16343,-21.421,{"v":8.49e-102,"d":"8.49E-102"},{"v":4.02e-99,"d":"4.02E-99"},"full_name=ATP-binding cassette G6. ABC-2 type transporter family protein. Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16).","AT1G15910","FDM1",622.61,-2.6635,0.13681,-19.468,{"v":2.04e-84,"d":"2.04E-84"},{"v":9.33e-82,"d":"9.33E-82"},"full_name=factor of DNA methylation 1. XH/XS domain-containing protein. Belongs to a subgroup of SGS3-like proteins that act redundantly in RNA-directed DNA methylation: AT1G15910 (FDM1), AT4G00380 (FDM2), AT3G12550 (FDM3), AT1G13790 (FDM4), AT1G80790 (FDM5).","AT5G06760","LEA4-5",13681,2.4865,0.13398,18.56,{"v":6.82e-77,"d":"6.82E-77"},{"v":2.97e-74,"d":"2.97E-74"},"full_name=Late Embryogenesis Abundant 4-5. Late Embryogenesis Abundant 4-5. Encodes LEA4-5, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment. Most of the diverse set of LEA proteins can be grouped according to properties such as high hydrophilicity and high content of glycine or other small amino acids in what has been termed hydrophilins. LEA4-5 protects enzyme activities from the adverse effects induced by freeze-thaw cycles in vitro.","AT4G34050","CCoAOMT1",457.31,-5.9838,0.25923,-23.083,{"v":6.89e-118,"d":"6.89E-118"},{"v":2.96e-115,"d":"2.96E-115"},"full_name=caffeoyl coenzyme A O-methyltransferase 1. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT3G27660","OLEO4",51399,-1.102,0.061569,-17.898,1.22E-71,{"v":5.1e-69,"d":"5.10E-69"},"full_name=oleosin 4. oleosin 4. Encodes oleosin4 (Plant Cell, 2006, 18:1961), a protein found in oil bodies, involved in seed lipid accumulation. Functions in freezing tolerance of seeds. Note: also referred to as OLE3 in Plant Journal 2008, 55:798."]
["AT5G46110","APE2",1256.5,-2.8807,0.13467,-21.391,{"v":1.6e-101,"d":"1.60E-101"},{"v":7.4e-99,"d":"7.40E-99"},"full_name=ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2. Glucose-6-phosphate/phosphate translocator-like protein. Encodes a chloroplast triose phosphate / 3-phosphoglycerate translocator that transports triose phosphates derived from the Calvin cycle in the stroma to the cytosol for use in sucrose synthesis and other biosynthetic processes. A tpt mutant has altered acclimation responses.","AT3G26650","GAPA",514.38,-2.7719,0.14528,-19.08,{"v":3.71e-81,"d":"3.71E-81"},{"v":1.66e-78,"d":"1.66E-78"},"full_name=glyceraldehyde 3-phosphate dehydrogenase A subunit. glyceraldehyde 3-phosphate dehydrogenase A subunit. Encodes one of the two subunits forming the photosynthetic glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and as such a constituent of the supramolecular complex with phosphoribulokinase (PRK) thought to be linked by a small peptide encoded by CP12-2. GapA-1 is coordinately expressed by light with PRK and CP12-2. The enzyme activity, tested in leaf protein extracts dropped significantly after external sucrose treatment for the photosynthetic GAPDH (NADPH-dependent) but not for the cytosolic GAPDH (NADH-dependent).","AT2G35300","LEA18",2571.7,3.4044,0.18343,18.559,{"v":6.86e-77,"d":"6.86E-77"},{"v":2.97e-74,"d":"2.97E-74"},"full_name=late embryogenesis abundant 18. Late embryogenesis abundant protein, group 1 protein. Encodes LEA4-2/LEA18, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment.","AT1G25530",null,478.87,-5.2181,0.23065,-22.624,2.53E-113,{"v":1.06e-110,"d":"1.06E-110"},"Transmembrane amino acid transporter family protein.","AT5G45630",null,324.11,-2.6421,0.14782,-17.874,{"v":1.88e-71,"d":"1.88E-71"},{"v":7.69e-69,"d":"7.69E-69"},"senescence regulator (Protein of unknown function, DUF584)."]
["AT4G02770","PSAD-1",886.18,-2.9888,0.14098,-21.201,9.39E-100,4.22E-97,"full_name=photosystem I subunit D-1. photosystem I subunit D-1. Encodes a protein predicted by sequence similarity with spinach PsaD to be photosystem I reaction center subunit II (PsaD1)","AT1G26400","ATBBE5",414.65,3.2392,0.17068,18.979,{"v":2.56e-80,"d":"2.56E-80"},{"v":1.12e-77,"d":"1.12E-77"},"FAD-binding Berberine family protein.","AT2G20560","DNAJ",993.65,3.2838,0.17752,18.498,{"v":2.13e-76,"d":"2.13E-76"},{"v":9e-74,"d":"9.00E-74"},"DNAJ heat shock family protein.","AT3G03470","CYP89A9",671.79,-2.5615,0.11325,-22.619,{"v":2.82e-113,"d":"2.82E-113"},{"v":1.15e-110,"d":"1.15E-110"},"full_name=cytochrome P450, family 87, subfamily A, polypeptide 9. cytochrome P450, family 87, subfamily A, polypeptide 9. member of CYP89A","AT1G54050","HSP17.4B",1836.9,-1.4018,0.078539,-17.849,{"v":2.96e-71,"d":"2.96E-71"},1.18E-68,"HSP20-like chaperones superfamily protein."]
["AT3G56940","CRD1",894.8,-2.554,0.12096,-21.114,{"v":5.87e-99,"d":"5.87E-99"},{"v":2.58e-96,"d":"2.58E-96"},"full_name=COPPER RESPONSE DEFECT 1. dicarboxylate diiron protein, putative (Crd1). Encodes a putative ZIP protein with varying mRNA accumulation in leaves, stems and roots. Has a consensus carboxylate-bridged di-iron binding site.","AT1G30380","PSAK",233.31,-4.601,0.2449,-18.787,{"v":9.59e-79,"d":"9.59E-79"},{"v":4.08e-76,"d":"4.08E-76"},"full_name=photosystem I subunit K. photosystem I subunit K. Encodes subunit K of photosystem I reaction center.","AT5G14570","NRT2.7",322.36,4.7793,0.26235,18.217,{"v":3.79e-74,"d":"3.79E-74"},{"v":1.56e-71,"d":"1.56E-71"},"full_name=high affinity nitrate transporter 2.7. high affinity nitrate transporter 2.7. Encodes ATNRT2.7, a nitrate transporter that controls nitrate content in seeds. Expression is detected in reproductive organs and peaks in seeds. Localized to the vacuolar membrane.","AT1G23800","ALDH2B7",352.12,-4.6312,0.20516,-22.573,{"v":7.93e-113,"d":"7.93E-113"},3.16E-110,"full_name=aldehyde dehydrogenase 2B7. aldehyde dehydrogenase 2B7. Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product.","AT3G46660","UGT76E12",1758.1,1.4,0.078476,17.84,3.43E-71,1.33E-68,"full_name=UDP-glucosyl transferase 76E12. UDP-glucosyl transferase 76E12."]
["AT2G30570","PSBW",890.94,-2.7746,0.13173,-21.064,1.71E-98,{"v":7.33e-96,"d":"7.33E-96"},"full_name=photosystem II reaction center W. photosystem II reaction center W. Encodes PsbW, a protein similar to photosystem II reaction center subunit W. Loss of PsbW destabilizes the supramolecular organization of PSII.","AT3G53040",null,1264.7,3.39,0.18104,18.725,{"v":3.08e-78,"d":"3.08E-78"},{"v":1.28e-75,"d":"1.28E-75"},"late embryogenesis abundant protein, putative / LEA protein.","AT3G48580","XTH11",831.18,2.7309,0.15008,18.196,5.52E-74,{"v":2.22e-71,"d":"2.22E-71"},"full_name=xyloglucan endotransglucosylase/hydrolase 11. xyloglucan endotransglucosylase/hydrolase 11.","AT2G29500","HSP17.6B",1856.9,2.73,0.12109,22.546,{"v":1.47e-112,"d":"1.47E-112"},{"v":5.73e-110,"d":"5.73E-110"},"HSP20-like chaperones superfamily protein.","AT1G05560","UGT75B1",654.55,2.1662,0.12265,17.661,{"v":8.32e-70,"d":"8.32E-70"},{"v":3.15e-67,"d":"3.15E-67"},"full_name=UDP-glucosyltransferase 75B1. UDP-glucosyltransferase 75B1. A UDP-glucose transferase localized in the phragmoplast. It has been co-purified with the callose synthase complex and may transfer UDP-glucose from sucrose synthase to the callose synthase and thus help form a substrate channel for the synthesis of callose at the forming cell plate. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. UGT1 encodes a protein with glucosyltransferase activity with high sequence homology to UGT2 (AT1G05530). It belongs to an UGT subfamily that binds UDP-glucose but not UDP-glucuronate, UDP-galactose, or UDP-rhamnose as the glycosyl donor. UGT1 was shown to be able to use abscisic acid as glycosylation substrate in the presence of UDP-glucose. UGT1/UGT75B1 catalyzes the formation of the p-aminobenzoate-glucose ester in vitro and in vivo. It appears to be the enzyme predominantly responsible for pABA-Glc formation in Arabidopsis based on assays in leaves, flowers, and siliques."]
["AT1G49430","LACS2",1388.3,-2.8178,0.13581,-20.747,1.29E-95,{"v":5.41e-93,"d":"5.41E-93"},"full_name=long-chain acyl-CoA synthetase 2. long-chain acyl-CoA synthetase 2. Encodes a long chain acyl-CoA synthetase that catalyzes the synthesis of omega-hydroxy fatty acyl-CoA intermediates in the pathway to cutin synthesis. Required for repression of lateral root formation.","AT5G55730","FLA1",289.12,-3.8136,0.20675,-18.445,{"v":5.72e-76,"d":"5.72E-76"},2.32E-73,"full_name=FASCICLIN-like arabinogalactan 1. FASCICLIN-like arabinogalactan 1. Encodes fasciclin-like arabinogalactan-protein 1 (Fla1). fla1 mutants show defects in shoot regeneration.","AT1G74710","EDS16",603.58,4.2777,0.23513,18.193,{"v":5.87e-74,"d":"5.87E-74"},{"v":2.31e-71,"d":"2.31E-71"},"full_name=ENHANCED DISEASE SUSCEPTIBILITY TO ERYSIPHE ORONTII 16. ADC synthase superfamily protein. Encodes a protein with isochorismate synthase activity. Mutants fail to accumulate salicylic acid. Its function may be redundant with that of ICS2 (AT1G18870).","AT4G18425","DMP4",815.88,-4.8999,0.21756,-22.522,{"v":2.51e-112,"d":"2.51E-112"},{"v":9.52e-110,"d":"9.52E-110"},"transmembrane protein, putative (DUF679).","AT5G60790","ABCF1",2025.2,1.2054,0.070523,17.093,1.68E-65,{"v":6.2e-63,"d":"6.20E-63"},"full_name=ATP-binding cassette F1. ABC transporter family protein. member of GCN subfamily"]
["AT3G47470","LHCA4",2306.1,-2.1401,0.10325,-20.727,1.98E-95,{"v":8.11e-93,"d":"8.11E-93"},"full_name=light-harvesting chlorophyll-protein complex I subunit A4. light-harvesting chlorophyll-protein complex I subunit A4. Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins.","AT1G44575","NPQ4",537.2,-2.8138,0.15422,-18.245,2.25E-74,{"v":8.84e-72,"d":"8.84E-72"},"full_name=NONPHOTOCHEMICAL QUENCHING 4. Chlorophyll A-B binding family protein. Encoding PSII-S (CP22), a ubiquitous pigment-binding protein associated with photosystem II (PSII) of higher plants. Involved in nonphotochemical quenching rather than in photosynthesis. Mutant has a normal violaxanthin cycle but has a limited capacity of quenching singlet excited chlorophylls and is tolerant to lipid peroxidation.","AT4G02520","GSTF2",409.62,5.8854,0.32388,18.172,{"v":8.65e-74,"d":"8.65E-74"},{"v":3.32e-71,"d":"3.32E-71"},"full_name=glutathione S-transferase PHI 2. glutathione S-transferase PHI 2. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.","AT3G12120","FAD2",1095.4,-3.3497,0.15067,-22.232,1.68E-109,{"v":6.22e-107,"d":"6.22E-107"},"full_name=fatty acid desaturase 2. fatty acid desaturase 2. Major enzyme responsible for the synthesis of 18:2 fatty acids in the endoplasmic reticulum. Contains His-rich motifs, which contribute to the interaction with the electron donor cytochrome b5. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.","AT1G15430",null,521.74,1.9223,0.11285,17.034,{"v":4.62e-65,"d":"4.62E-65"},1.67E-62,"hypothetical protein (DUF1644)."]
["AT2G48130","LTPG15",481.22,-2.8578,0.13794,-20.717,{"v":2.41e-95,"d":"2.41E-95"},{"v":9.64e-93,"d":"9.64E-93"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT2G26330","ER",1112.4,-1.879,0.10299,-18.245,{"v":2.28e-74,"d":"2.28E-74"},{"v":8.84e-72,"d":"8.84E-72"},"full_name=ERECTA. Leucine-rich receptor-like protein kinase family protein. Homologous to receptor protein kinases. Involved in specification of organs originating from the shoot apical meristem. Contains a cytoplasmic protein kinase catalytic domain, a transmembrane region, and an extracellular leucine-rich repeat. ER has been identified as a quantitative trait locus for transpiration efficiency by influencing epidermal and mesophyll development, stomatal density and porosity of leaves. It has been implicated in resistance to the bacterium Ralstonia solanacearum and to the necrotrophic fungus Plectosphaerella cucumerina. Together with ERL1 and ERL2, ER governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes.","AT2G43590",null,254.42,6.2754,0.35164,17.846,{"v":3.1E-71,"d":"3.10E-71"},{"v":1.16e-68,"d":"1.16E-68"},"Chitinase family protein.","AT5G12030","HSP17.6A",45019,2.6385,0.11895,22.182,{"v":5.15e-109,"d":"5.15E-109"},{"v":1.8699999999999999E-106,"d":"1.87E-106"},"full_name=heat shock protein 17.6A. heat shock protein 17.6A. Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development.","AT5G57550","XTH25",50534,-1.5163,0.089296,-16.981,{"v":1.14e-64,"d":"1.14E-64"},{"v":4.05e-62,"d":"4.05E-62"},"full_name=xyloglucan endotransglucosylase/hydrolase 25. xyloglucan endotransglucosylase/hydrolase 25. xyloglucan endotransglycosylase-related protein (XTR3)"]
["AT1G55670","PSAG",1281,-2.6914,0.13077,-20.581,{"v":4.05e-94,"d":"4.05E-94"},{"v":1.58e-91,"d":"1.58E-91"},"full_name=photosystem I subunit G. photosystem I subunit G. Encodes subunit G of photosystem I, an 11-kDa membrane protein that plays an important role in electron transport between plastocyanin and PSI and is involved in the stability of the PSI complex. PSI-G subunit is bound to PSI-B and is in contact with Lhca1. The protein inserts into thylakoids by a direct or spontaneous pathway that does not involve the activities of any known chloroplast protein-targeting machinery. PSI-G appears to be directly or indirectly involved in the interaction between Photosystem I and plastocyanin.","AT2G06520","PSBX",261.97,-4.4367,0.24582,-18.048,{"v":8.14e-73,"d":"8.14E-73"},{"v":3.08e-70,"d":"3.08E-70"},"full_name=photosystem II subunit X. photosystem II subunit X. Encodes a protein with sequence similarity to the spinach photosystem II subunit PsbX.","AT1G79690","NUDT3",3165.9,-2.3939,0.13503,-17.728,2.54E-70,{"v":9.32e-68,"d":"9.32E-68"},"full_name=nudix hydrolase homolog 3. nudix hydrolase homolog 3.","AT2G25520",null,849.25,-2.6812,0.12111,-22.138,1.35E-108,{"v":4.79e-106,"d":"4.79E-106"},"Drug/metabolite transporter superfamily protein.","AT5G18450",null,2062.7,-1.9796,0.11694,-16.928,2.79E-64,{"v":9.66e-62,"d":"9.66E-62"},"Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought."]
["AT3G06390","CASPL1D2",456.2,-4.0688,0.1982,-20.529,1.19E-93,{"v":4.57e-91,"d":"4.57E-91"},"Uncharacterized protein family (UPF0497).","AT3G19820","DWF1",981.14,-1.8649,0.1038,-17.966,{"v":3.61e-72,"d":"3.61E-72"},1.34E-69,"full_name=DWARF 1. cell elongation protein / DWARF1 / DIMINUTO (DIM). Involved in the conversion of the early brassinosteroid precursor 24-methylenecholesterol to campesterol. Brassinosteroids affect cellular elongation. Mutants have dwarf phenotype. DWF1 is a Ca2+-dependent calmodulin-binding protein.","AT5G25180","CYP71B14",754.08,3.6981,0.20877,17.713,{"v":3.3e-70,"d":"3.30E-70"},1.19E-67,"full_name=cytochrome P450, family 71, subfamily B, polypeptide 14. cytochrome P450, family 71, subfamily B, polypeptide 14. putative cytochrome P450","AT5G64190",null,680.72,-4.5,0.20455,-22,{"v":2.91e-107,"d":"2.91E-107"},1.01E-104,"neuronal PAS domain protein.","AT5G39050","PMAT1",827.88,1.721,0.10207,16.861,{"v":8.68e-64,"d":"8.68E-64"},{"v":2.94e-61,"d":"2.94E-61"},"full_name=phenolic glucoside malonyltransferase 1. HXXXD-type acyl-transferase family protein. Encodes a malonyltransferase that may play a role in phenolic xenobiotic detoxification."]
["AT1G29910","CAB3",2420.1,-2.9811,0.14592,-20.43,9.09E-93,{"v":3.41e-90,"d":"3.41E-90"},"full_name=chlorophyll A/B binding protein 3. chlorophyll A/B binding protein 3. member of Chlorophyll a/b-binding protein family","AT5G20960","AO1",989.07,2.0053,0.11178,17.939,{"v":5.87e-72,"d":"5.87E-72"},2.13E-69,"full_name=aldehyde oxidase 1. aldehyde oxidase 1. Encodes aldehyde oxidase AA01.","AT4G25170",null,830.44,3.1165,0.17656,17.651,{"v":1e-69,"d":"1.00E-69"},3.52E-67,"Uncharacterized conserved protein (UCP012943).","AT1G26800","MPSR1",638.97,3.3937,0.15475,21.931,{"v":1.33e-106,"d":"1.33E-106"},{"v":4.52e-104,"d":"4.52E-104"},"RING/U-box superfamily protein.","AT1G06760","H1.1",800.66,-2.158,0.12825,-16.827,{"v":1.55e-63,"d":"1.55E-63"},{"v":5.16e-61,"d":"5.16E-61"},"winged-helix DNA-binding transcription factor family protein."]
["AT4G38970","FBA2",819.52,-2.7918,0.13685,-20.4,1.66E-92,{"v":6.09e-90,"d":"6.09E-90"},"full_name=fructose-bisphosphate aldolase 2. fructose-bisphosphate aldolase 2. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT4G15560","CLA1",379.74,-2.7716,0.15577,-17.793,{"v":8.05e-71,"d":"8.05E-71"},{"v":2.86e-68,"d":"2.86E-68"},"full_name=CLOROPLASTOS ALTERADOS 1. Deoxyxylulose-5-phosphate synthase. Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis","AT2G29500","HSP17.6B",269.78,3.387,0.19224,17.619,{"v":1.76e-69,"d":"1.76E-69"},{"v":6.08e-67,"d":"6.08E-67"},"HSP20-like chaperones superfamily protein.","AT5G09480",null,633.11,-7.5975,0.34921,-21.756,{"v":6.03e-105,"d":"6.03E-105"},{"v":2.01e-102,"d":"2.01E-102"},"hydroxyproline-rich glycoprotein family protein.","AT5G09590","MTHSC70-2",3997.5,-0.99293,0.059101,-16.801,2.41E-63,{"v":7.83e-61,"d":"7.83E-61"},"full_name=mitochondrial HSO70 2. mitochondrial HSO70 2. heat shock protein 70 (Hsc70-5); nuclear"]
["AT5G39130",null,1710.8,-2.2815,0.11227,-20.321,{"v":8.4e-92,"d":"8.40E-92"},3.02E-89,"RmlC-like cupins superfamily protein.","AT3G61470","LHCA2",213.74,-4.788,0.27007,-17.729,{"v":2.52e-70,"d":"2.52E-70"},{"v":8.79e-68,"d":"8.79E-68"},"full_name=photosystem I light harvesting complex gene 2. photosystem I light harvesting complex protein. Encodes a component of the light harvesting antenna complex of photosystem I.","AT1G29050","TBL38",274.46,-3.9701,0.22664,-17.517,1.06E-68,{"v":3.59e-66,"d":"3.59E-66"},"full_name=TRICHOME BIREFRINGENCE-LIKE 38. TRICHOME BIREFRINGENCE-LIKE 38. Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT1G73010","PS2",909.35,-3.3074,0.15287,-21.635,{"v":8.42e-104,"d":"8.42E-104"},{"v":2.75e-101,"d":"2.75E-101"},"full_name=phosphate starvation-induced gene 2. inorganic pyrophosphatase 1. Encodes PPsPase1, a pyrophosphate-specific phosphatase catalyzing the specific cleavage of pyrophosphate (Km 38.8 uM) with an alkaline catalytic pH optimum. Expression is upregulated in the shoot of cax1/cax3 mutant.","AT1G07400","HSP17.8",311.72,-2.7481,0.16424,-16.733,{"v":7.59e-63,"d":"7.59E-63"},{"v":2.42e-60,"d":"2.42E-60"},"HSP20-like chaperones superfamily protein."]
["AT4G34510","KCS17",484.81,-3.5187,0.17401,-20.221,{"v":6.37e-91,"d":"6.37E-91"},2.25E-88,"full_name=3-ketoacyl-CoA synthase 17. 3-ketoacyl-CoA synthase 17. Encodes KCS17, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT1G62500","DEG27",5386.4,-2.2747,0.12852,-17.7,{"v":4.2e-70,"d":"4.20E-70"},1.44E-67,"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT5G05220",null,361.77,3.9245,0.2242,17.505,1.32E-68,4.37E-66,"hypothetical protein.","AT1G62080","TBA3",4959.4,-7.5636,0.35023,-21.596,{"v":1.96e-103,"d":"1.96E-103"},{"v":6.26e-101,"d":"6.26E-101"},"transmembrane protein.","AT3G11050","FER2",10543,-1.0965,0.065752,-16.676,1.97E-62,{"v":6.15e-60,"d":"6.15E-60"},"full_name=ferritin 2. ferritin 2."]
["AT3G53510","ABCG20",2424.3,-1.9813,0.098242,-20.167,{"v":1.89e-90,"d":"1.89E-90"},6.55E-88,"full_name=ATP-binding cassette G20. ABC-2 type transporter family protein. Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16).","AT4G05180","PSBQ-2",264.59,-5.7008,0.32431,-17.578,{"v":3.62e-69,"d":"3.62E-69"},{"v":1.21e-66,"d":"1.21E-66"},"full_name=photosystem II subunit Q-2. photosystem II subunit Q-2. Encodes the PsbQ subunit of the oxygen evolving complex of photosystem II.","AT1G78070",null,1649.3,2.0925,0.12001,17.435,4.45E-68,{"v":1.45e-65,"d":"1.45E-65"},"Transducin/WD40 repeat-like superfamily protein.","AT3G05260",null,21084,1.6082,0.074516,21.581,{"v":2.69e-103,"d":"2.69E-103"},{"v":8.44e-101,"d":"8.44E-101"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT5G65720","NFS1",776.44,2.3116,0.13877,16.657,{"v":2.67e-62,"d":"2.67E-62"},{"v":8.17e-60,"d":"8.17E-60"},"full_name=nitrogen fixation S (NIFS)-like 1. nitrogen fixation S (NIFS)-like 1. Encodes a cysteine desulfurase whose activity is dependent on AtSufE activation. It requires pyridoxal phosphate (PLP) for proper folding. Its catalytic efficiency is increase three-fold in the presence of AtFH (frataxin)."]
["AT1G06680","PSBP-1",2243.9,-2.0437,0.10169,-20.097,{"v":7.89e-90,"d":"7.89E-90"},{"v":2.68e-87,"d":"2.68E-87"},"full_name=photosystem II subunit P-1. photosystem II subunit P-1. Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution. Phosphorylation of this protein is dependent on calcium. In plsp1-1 mutant plastids, the nonmature form of the protein localizes in the stroma.","AT3G15280",null,1222.4,2.8633,0.16302,17.564,{"v":4.64e-69,"d":"4.64E-69"},1.53E-66,"hypothetical protein.","AT1G55850","CSLE1",316.35,3.1261,0.1798,17.386,{"v":1.05e-67,"d":"1.05E-67"},{"v":3.35e-65,"d":"3.35E-65"},"full_name=cellulose synthase like E1. cellulose synthase like E1. encodes a protein similar to cellulose synthase","AT2G47180","GolS1",3814.3,1.9276,0.089829,21.458,{"v":3.81e-102,"d":"3.81E-102"},{"v":1.17e-99,"d":"1.17E-99"},"full_name=galactinol synthase 1. galactinol synthase 1. GolS1 is a galactinol synthase that catalyzes the formation of galactinol from UDP-galactose and myo-inositol. GolS1 transcript levels rise in response to methyl viologen, an oxidative damage-inducing agent. Plants over-expressing GolS1 have increased tolerance to salt, chilling, and high-light stress.","AT1G03880","CRU2",66476,-1.3485,0.081367,-16.573,{"v":1.09e-61,"d":"1.09E-61"},{"v":3.26e-59,"d":"3.26E-59"},"full_name=cruciferin 2. cruciferin 2. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds."]
["AT4G18920",null,640.29,2.8741,0.14371,19.999,{"v":5.61e-89,"d":"5.61E-89"},{"v":1.87e-86,"d":"1.87E-86"},"histone acetyltransferase (DUF1264).","AT4G23990","CSLG3",197.74,5.1969,0.29801,17.439,{"v":4.2e-68,"d":"4.20E-68"},{"v":1.35e-65,"d":"1.35E-65"},"full_name=cellulose synthase like G3. cellulose synthase like G3. encodes a protein similar to cellulose synthase","AT5G05320",null,449.04,2.5421,0.14673,17.325,3.05E-67,{"v":9.56e-65,"d":"9.56E-65"},"FAD/NAD(P)-binding oxidoreductase family protein.","AT5G65530","ATRLCK VI_A3",1285.4,-2.4025,0.11222,-21.409,{"v":1.1e-101,"d":"1.10E-101"},{"v":3.32e-99,"d":"3.32E-99"},"Protein kinase superfamily protein. Encodes a protein kinase involved in mediating resistance to fungi and also trichome branch number. Kinase activity is increased by ROP6 which also affects its sub-cellular localization (becomes localized to the cell periphery_","AT3G22490","ATRAB28",12128,-1.2123,0.073764,-16.435,{"v":1.07e-60,"d":"1.07E-60"},3.14E-58,"Seed maturation protein."]
["AT5G16770","MYB9",451.08,-3.17,0.15935,-19.894,4.61E-88,{"v":1.51e-85,"d":"1.51E-85"},"full_name=myb domain protein 9. myb domain protein 9. Member of the R2R3 factor gene family.","AT1G25422",null,323.63,2.7212,0.15623,17.418,{"v":6.06e-68,"d":"6.06E-68"},{"v":1.92e-65,"d":"1.92E-65"},"hypothetical protein.","AT5G20960","AO1",3469.7,2.0506,0.11909,17.219,1.92E-66,{"v":5.91e-64,"d":"5.91E-64"},"full_name=aldehyde oxidase 1. aldehyde oxidase 1. Encodes aldehyde oxidase AA01.","AT2G18050","HIS1-3",635.24,2.8214,0.13202,21.37,{"v":2.53e-101,"d":"2.53E-101"},{"v":7.5e-99,"d":"7.50E-99"},"full_name=histone H1-3. histone H1-3. encodes a structurally divergent linker histone whose gene expression is induced by dehydration and ABA.","AT1G03230","SAP1",414.34,2.386,0.14734,16.194,{"v":5.56e-59,"d":"5.56E-59"},1.61E-56,"Eukaryotic aspartyl protease family protein."]
["AT4G26590","OPT5",459.76,3.326,0.16748,19.859,{"v":9.26e-88,"d":"9.26E-88"},{"v":2.97e-85,"d":"2.97E-85"},"full_name=oligopeptide transporter 5. oligopeptide transporter 5. oligopeptide transporter","AT5G27200","ACP5",190.55,-4.2636,0.24485,-17.413,{"v":6.61e-68,"d":"6.61E-68"},{"v":2.06e-65,"d":"2.06E-65"},"full_name=acyl carrier protein 5. acyl carrier protein 5. encodes an acyl carrier protein","AT2G47180","GolS1",988.74,2.1224,0.12358,17.175,{"v":4.07e-66,"d":"4.07E-66"},{"v":1.23e-63,"d":"1.23E-63"},"full_name=galactinol synthase 1. galactinol synthase 1. GolS1 is a galactinol synthase that catalyzes the formation of galactinol from UDP-galactose and myo-inositol. GolS1 transcript levels rise in response to methyl viologen, an oxidative damage-inducing agent. Plants over-expressing GolS1 have increased tolerance to salt, chilling, and high-light stress.","AT5G02380","MT2B",1818,-2.9033,0.13612,-21.329,6.05E-101,1.77E-98,"full_name=metallothionein 2B. metallothionein 2B. cysteine-rich protein with copper-binding activity","AT3G51810","EM1",22802,-1.3254,0.082387,-16.087,{"v":3.13e-58,"d":"3.13E-58"},{"v":8.9e-56,"d":"8.90E-56"},"full_name=LATE EMBRYOGENESIS ABUNDANT 1. Stress induced protein. Encodes a ABA-inducible protein that accumulates during seed maturation, in parallel with its corresponding mRNA but with a 3 d delay. During germination, AtEm1 protein undergoes two successive cleavages before being degraded. Both proteins are more stable than the corresponding mRNA. The gene can be activated by the basic leucine zipper transcription factor ABI5. Expressed predominantly in provascular tissues with the strongest expression in the root tip."]
["AT3G46780","PTAC16",327.36,-3.6815,0.18559,-19.837,1.42E-87,{"v":4.48e-85,"d":"4.48E-85"},"full_name=plastid transcriptionally active 16. plastid transcriptionally active 16.","AT1G12230","GSM2-LIKE",709.65,-1.8934,0.10883,-17.397,{"v":8.7e-68,"d":"8.70E-68"},2.66E-65,"Aldolase superfamily protein.","AT5G42290",null,515.61,2.4274,0.14165,17.137,7.85E-66,{"v":2.33e-63,"d":"2.33E-63"},"transcription activator-like protein.","AT5G14180","MPL1",1262.4,3.9949,0.188,21.249,3.38E-100,{"v":9.68e-98,"d":"9.68E-98"},"full_name=Myzus persicae-induced lipase 1. Myzus persicae-induced lipase 1.","AT5G52640","HSP90.1",10921,-1.1743,0.073259,-16.03,{"v":7.92e-58,"d":"7.92E-58"},{"v":2.21e-55,"d":"2.21E-55"},"full_name=heat shock protein 90.1. heat shock-like protein. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance."]
["AT3G51810","EM1",2260.9,3.6765,0.18542,19.828,{"v":1.7e-87,"d":"1.70E-87"},{"v":5.27e-85,"d":"5.27E-85"},"full_name=LATE EMBRYOGENESIS ABUNDANT 1. Stress induced protein. Encodes a ABA-inducible protein that accumulates during seed maturation, in parallel with its corresponding mRNA but with a 3 d delay. During germination, AtEm1 protein undergoes two successive cleavages before being degraded. Both proteins are more stable than the corresponding mRNA. The gene can be activated by the basic leucine zipper transcription factor ABI5. Expressed predominantly in provascular tissues with the strongest expression in the root tip.","AT5G48850","ATSDI1",618.41,3.3776,0.19534,17.291,{"v":5.53e-67,"d":"5.53E-67"},1.66E-64,"full_name=SULPHUR DEFICIENCY-INDUCED 1. Tetratricopeptide repeat (TPR)-like superfamily protein. homologous to the wheat sulphate deficiency-induced gene sdi1. Expression in root and leaf is induced by sulfur starvation. Knockout mutants retained higher root and leaf sulfate concentrations, indicating a role in regulation of stored sulfate pools.","AT1G48750",null,266.65,3.4788,0.20325,17.116,{"v":1.13e-65,"d":"1.13E-65"},{"v":3.29e-63,"d":"3.29E-63"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT2G26250","KCS10",447.26,-5.2497,0.24798,-21.17,1.81E-99,5.09E-97,"full_name=3-ketoacyl-CoA synthase 10. 3-ketoacyl-CoA synthase 10. epidermis-specific, encodes KCS10, a putative 3-ketoacyl-CoA synthase. probably involved in the synthesis of long-chain lipids found in the cuticle.","AT4G10250","ATHSP22.0",579.38,-3.1212,0.19538,-15.975,1.92E-57,{"v":5.28e-55,"d":"5.28E-55"},"HSP20-like chaperones superfamily protein. Columbia endomembrane-localized small heat shock protein"]
["AT3G04370","PDLP4",543.92,-2.7706,0.14016,-19.767,5.72E-87,{"v":1.74e-84,"d":"1.74E-84"},"full_name=plasmodesmata-located protein 4. plasmodesmata-located protein 4. Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.","AT3G05020","ACP1",1771.6,-1.6977,0.098555,-17.226,{"v":1.7E-66,"d":"1.70E-66"},{"v":5.04e-64,"d":"5.04E-64"},"full_name=acyl carrier protein 1. acyl carrier protein 1. encodes an acyl carrier protein expressed in leaves, roots, and dry seeds. Protein is not regulated by light.","AT5G64750","ABR1",351.88,3.5584,0.20821,17.091,1.74E-65,{"v":4.98e-63,"d":"4.98E-63"},"full_name=ABA REPRESSOR1. Integrase-type DNA-binding superfamily protein. Encodes a putative transcription factor containing an AP2 domain. Is a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. Expressed in response to ABA, osmotic stress, sugar stress and drought. Mutants are hypersensitive to these stresses. May be involved in regulation of ABA mediated stress response.","AT2G14878",null,2842.4,1.6616,0.078913,21.056,{"v":2.02e-98,"d":"2.02E-98"},{"v":5.6e-96,"d":"5.60E-96"},"other_RNA.","AT5G02480",null,1007.7,-1.3669,0.085992,-15.895,{"v":6.82e-57,"d":"6.82E-57"},{"v":1.84e-54,"d":"1.84E-54"},"HSP20-like chaperones superfamily protein."]
["AT4G22100","BGLU3",640.72,3.5916,0.182,19.734,{"v":1.11e-86,"d":"1.11E-86"},{"v":3.32e-84,"d":"3.32E-84"},"full_name=beta glucosidase 2. beta glucosidase 2.","AT3G58450","USP",2712.7,2.2609,0.13178,17.156,{"v":5.65e-66,"d":"5.65E-66"},1.64E-63,"Adenine nucleotide alpha hydrolases-like superfamily protein.","AT3G50980","XERO1",2726.9,1.8317,0.10736,17.061,{"v":2.87e-65,"d":"2.87E-65"},{"v":8.1e-63,"d":"8.10E-63"},"full_name=dehydrin xero 1. dehydrin xero 1.","AT1G05850","POM1",897.59,-2.1408,0.10185,-21.019,{"v":4.36e-98,"d":"4.36E-98"},{"v":1.19e-95,"d":"1.19E-95"},"full_name=POM-POM1. Chitinase family protein. Encodes an endo chitinase-like protein AtCTL1. Essential for tolerance to heat, salt and drought stresses. Also involved in root hair development, cell expansion and response to cytokinin. Allelic to erh2. 11 alleles described in Hauser (1995). Mutant is defective in acquired thermotolerance, appears semidwarf throughout its life cycle and has extra lateral branches. There are two EMS alleles. Expression of AtHSP101 is not affected in the mutants.","AT5G66110","HIPP27",1143.3,-1.3228,0.083374,-15.866,{"v":1.09e-56,"d":"1.09E-56"},{"v":2.89e-54,"d":"2.89E-54"},"full_name=heavy metal associated isoprenylated plant protein 27. Heavy metal transport/detoxification superfamily protein."]
["AT2G34420","LHB1B2",3682.8,-2.2645,0.11505,-19.682,{"v":3.08e-86,"d":"3.08E-86"},{"v":9.07e-84,"d":"9.07E-84"},null,"AT1G16030","Hsp70b",693.4,2.5837,0.15091,17.12,1.05E-65,{"v":2.99e-63,"d":"2.99E-63"},"full_name=heat shock protein 70B. heat shock protein 70B.","AT1G67090","RBCS1A",347.33,-3.4821,0.20427,-17.047,{"v":3.7E-65,"d":"3.70E-65"},1.02E-62,"full_name=ribulose bisphosphate carboxylase small chain 1A. ribulose bisphosphate carboxylase small chain 1A. Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410). Functions to yield sufficient Rubisco content for leaf photosynthetic capacity.","AT4G36850",null,1072.7,-3.0831,0.14685,-20.994,{"v":7.43e-98,"d":"7.43E-98"},1.99E-95,"PQ-loop repeat family protein / transmembrane family protein.","AT1G26400","ATBBE5",692.01,-1.7094,0.108,-15.829,1.97E-56,{"v":5.14e-54,"d":"5.14E-54"},"FAD-binding Berberine family protein."]
["AT4G24130",null,1108.6,-2.2175,0.11302,-19.621,1.03E-85,{"v":3e-83,"d":"3.00E-83"},"DUF538 family protein (Protein of unknown function, DUF538).","AT1G29910","CAB3",255.35,-5.9342,0.34839,-17.034,{"v":4.63e-65,"d":"4.63E-65"},1.28E-62,"full_name=chlorophyll A/B binding protein 3. chlorophyll A/B binding protein 3. member of Chlorophyll a/b-binding protein family","AT2G34700",null,351.24,-2.7803,0.16362,-16.992,{"v":9.33e-65,"d":"9.33E-65"},{"v":2.54e-62,"d":"2.54E-62"},"Pollen Ole e 1 allergen and extensin family protein.","AT5G54000",null,1010.8,2.219,0.10597,20.94,{"v":2.33e-97,"d":"2.33E-97"},{"v":6.13e-95,"d":"6.13E-95"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT5G07330",null,14531,-0.76685,0.04862,-15.772,{"v":4.82e-56,"d":"4.82E-56"},1.24E-53,"NFU1 iron-sulfur cluster protein."]
["AT1G31330","PSAF",998.72,-2.7593,0.14109,-19.558,{"v":3.53e-85,"d":"3.53E-85"},{"v":1.01e-82,"d":"1.01E-82"},"full_name=photosystem I subunit F. photosystem I subunit F. Encodes subunit F of photosystem I.","AT1G04380",null,231.8,-3.5895,0.21073,-17.033,{"v":4.64e-65,"d":"4.64E-65"},1.28E-62,"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. encodes a protein similar to a 2-oxoglutarate-dependent dioxygenase","AT1G62210",null,620.17,-3.1415,0.18514,-16.968,{"v":1.43e-64,"d":"1.43E-64"},{"v":3.82e-62,"d":"3.82E-62"},"hypothetical protein.","AT1G73680","ALPHA DOX2",419.87,-4.3672,0.20898,-20.897,{"v":5.66e-97,"d":"5.66E-97"},{"v":1.47e-94,"d":"1.47E-94"},"full_name=alpha dioxygenase. alpha dioxygenase. Encodes an alpha dioxygenase. Recombinant protein catalyzes the conversion of a wide range of fatty acids into 2(R)-hydroperoxy derivatives.","AT5G59790","SOK5",469.31,1.9372,0.12356,15.678,{"v":2.13e-55,"d":"2.13E-55"},{"v":5.38e-53,"d":"5.38E-53"},"UPSTREAM OF FLC protein (DUF966)."]
["AT4G15396","CYP702A6",1633.4,2.2371,0.11491,19.468,{"v":2.07e-84,"d":"2.07E-84"},5.81E-82,"full_name=cytochrome P450, family 702, subfamily A, polypeptide 6. cytochrome P450, family 702, subfamily A, polypeptide 6. a member of the cytochrome P450 family. molecular function unknown.","AT5G23940","PEL3",266.72,-3.3379,0.19667,-16.971,{"v":1.33e-64,"d":"1.33E-64"},{"v":3.63e-62,"d":"3.63E-62"},"full_name=PERMEABLE LEAVES3. HXXXD-type acyl-transferase family protein. Encodes PERMEABLE LEAVES3 (PEL3), a putative acyl-transferase. Mutation in this locus results in altered trichome phenotype (trcichomes become tangled during leaf expansion). Additional phenotype includes altered cuticle layer.","AT1G74960","FAB1",663.97,-2.4903,0.14778,-16.852,1.01E-63,2.68E-61,"full_name=fatty acid biosynthesis 1. fatty acid biosynthesis 1. Encodes a plastidic beta-ketoacyl-ACP synthase II, involved in fatty acid elongation from 16:0-ACP to 18:0-ACP. Homozygous knock-out mutants are embryo lethal, indicating early embryo development is sensitive to elevated 16:0.","AT4G03280","PETC",408.36,-3.5699,0.17282,-20.657,{"v":8.46e-95,"d":"8.46E-95"},{"v":2.16e-92,"d":"2.16E-92"},"full_name=photosynthetic electron transfer C. photosynthetic electron transfer C. Encodes the Rieske FeS center of cytochrome b6f complex. Gene is expressed in shoot but not in root. Mutant has reduced electron transport at saturating light intensities and Q-cycle activity is hypersensitive to acidification of the thylakoid lumen.","AT4G12400","Hop3",2194.6,-1.0874,0.069463,-15.654,{"v":3.1E-55,"d":"3.10E-55"},{"v":7.7e-53,"d":"7.70E-53"},"full_name=Hop3. stress-inducible protein. Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones."]
["AT1G56320",null,433.15,-3.2297,0.16602,-19.453,{"v":2.74e-84,"d":"2.74E-84"},7.59E-82,"hypothetical protein.","AT1G14930",null,5059.9,1.8224,0.10924,16.682,1.76E-62,{"v":4.71e-60,"d":"4.71E-60"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein.","AT3G48990","AAE3",2906.3,2.2106,0.13124,16.844,1.16E-63,{"v":3.01e-61,"d":"3.01E-61"},"full_name=ACYL-ACTIVATING ENZYME 3. AMP-dependent synthetase and ligase family protein. Encodes an oxalyl-CoA synthetase and is required for oxalate degradation, for normal seed development, and for defense against an oxalate-producing fungal pathogen.","AT4G25200","HSP23.6-MITO",851.52,6.3248,0.30623,20.654,{"v":9.07e-95,"d":"9.07E-95"},{"v":2.28e-92,"d":"2.28E-92"},"full_name=mitochondrion-localized small heat shock protein 23.6. mitochondrion-localized small heat shock protein 23.6. AtHSP23.6-mito mRNA, nuclear gene encoding mitochondrial","AT4G35160","ASMT",2276.9,-1.4191,0.09084,-15.622,{"v":5.19e-55,"d":"5.19E-55"},{"v":1.27e-52,"d":"1.27E-52"},"O-methyltransferase family protein."]
["AT4G05180","PSBQ-2",2151.3,-2.7344,0.14133,-19.348,2.14E-83,{"v":5.82e-81,"d":"5.82E-81"},"full_name=photosystem II subunit Q-2. photosystem II subunit Q-2. Encodes the PsbQ subunit of the oxygen evolving complex of photosystem II.","AT3G14240",null,605.14,-2.1171,0.12704,-16.665,{"v":2.36e-62,"d":"2.36E-62"},{"v":6.22e-60,"d":"6.22E-60"},"Subtilase family protein.","AT1G72100",null,8274.2,1.7784,0.10588,16.797,{"v":2.58e-63,"d":"2.58E-63"},{"v":6.59e-61,"d":"6.59E-61"},"late embryogenesis abundant domain-containing protein / LEA domain-containing protein.","AT1G53540","HSP17.6C",1723.9,3.1238,0.1526,20.47,{"v":3.95e-93,"d":"3.95E-93"},{"v":9.78e-91,"d":"9.78E-91"},"HSP20-like chaperones superfamily protein.","AT5G63030","GRXC1",10428,-1.0104,0.064833,-15.585,{"v":9.28e-55,"d":"9.28E-55"},{"v":2.24e-52,"d":"2.24E-52"},"full_name=glutaredoxin C1. Thioredoxin superfamily protein."]
["AT5G47670","NF-YB6",681.36,-2.5035,0.13156,-19.029,{"v":9.74e-81,"d":"9.74E-81"},{"v":2.61e-78,"d":"2.61E-78"},"full_name=nuclear factor Y, subunit B6. nuclear factor Y, subunit B6. Encodes LEC1-Like (L1L), closely related to LEC1 (Leafy Cotyledon1). Functions as a regulator of embryo development.","AT5G07030",null,619.23,-2.1029,0.12805,-16.423,1.32E-60,{"v":3.43e-58,"d":"3.43E-58"},"Eukaryotic aspartyl protease family protein.","AT1G16850",null,3098,2.0886,0.12441,16.788,{"v":2.98e-63,"d":"2.98E-63"},{"v":7.51e-61,"d":"7.51E-61"},"transmembrane protein.","AT3G23090","WDL3",493.47,-2.7848,0.13669,-20.374,{"v":2.87e-92,"d":"2.87E-92"},{"v":7e-90,"d":"7.00E-90"},"TPX2 (targeting protein for Xklp2) protein family.","AT1G75280",null,700.57,-1.4824,0.095587,-15.509,{"v":3.04e-54,"d":"3.04E-54"},{"v":7.21e-52,"d":"7.21E-52"},"NmrA-like negative transcriptional regulator family protein. isoflavone reductase, putative, identical to SP:P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: isoflavone reductase. Involved in response to oxidative stress."]
["AT4G09610","GASA2",314.1,4.8914,0.25807,18.954,{"v":4.13e-80,"d":"4.13E-80"},1.09E-77,"full_name=GAST1 protein homolog 2. GAST1 protein homolog 2.","AT1G16850",null,863.77,2.0103,0.12361,16.263,{"v":1.8E-59,"d":"1.80E-59"},{"v":4.61e-57,"d":"4.61E-57"},"transmembrane protein.","AT5G07200","GA20OX3",800.13,-3.9945,0.23804,-16.781,3.35E-63,{"v":8.33e-61,"d":"8.33E-61"},"full_name=gibberellin 20-oxidase 3. gibberellin 20-oxidase 3. encodes a gibberellin 20-oxidase.","AT1G25422",null,718.87,-2.419,0.11895,-20.336,{"v":6.2e-92,"d":"6.20E-92"},{"v":1.49e-89,"d":"1.49E-89"},"hypothetical protein.","AT5G53895",null,4476.5,-1.5112,0.098593,-15.328,{"v":4.98e-53,"d":"4.98E-53"},{"v":1.17e-50,"d":"1.17E-50"},"hypothetical protein."]
["AT5G63590","FLS3",312.09,-3.5582,0.18915,-18.812,{"v":6.02e-79,"d":"6.02E-79"},{"v":1.56e-76,"d":"1.56E-76"},"full_name=flavonol synthase 3. flavonol synthase 3.","AT3G15820","ROD1",286.49,-2.6664,0.1645,-16.209,4.32E-59,{"v":1.09e-56,"d":"1.09E-56"},"full_name=REDUCED OLEATE DESATURATION 1. phosphatidic acid phosphatase-related / PAP2-like protein. Functions as phosphatidylcholine:diacylglycerol cholinephosphotransferase, a major reaction for the transfer of 18:1 into phosphatidylcholine for desaturation and also for the reverse transfer of 18:2 and 18:3 into the triacylglycerols synthesis pathway","AT1G62060","TBA2",3197.2,-2.7782,0.16576,-16.761,{"v":4.74e-63,"d":"4.74E-63"},1.16E-60,"transmembrane protein.","AT3G26290","CYP71B26",353.51,-3.1205,0.15414,-20.245,{"v":3.92e-91,"d":"3.92E-91"},{"v":9.28e-89,"d":"9.28E-89"},"full_name=cytochrome P450, family 71, subfamily B, polypeptide 26. cytochrome P450, family 71, subfamily B, polypeptide 26. putative cytochrome P450","AT4G33467",null,1482.6,1.5581,0.10171,15.319,{"v":5.67e-53,"d":"5.67E-53"},{"v":1.31e-50,"d":"1.31E-50"},"hypothetical protein."]
["AT1G62070",null,440.36,-3.0725,0.16333,-18.812,{"v":6.07e-79,"d":"6.07E-79"},{"v":1.56e-76,"d":"1.56E-76"},"hypothetical protein.","AT4G17790",null,1433.7,-1.4709,0.090772,-16.204,{"v":4.74e-59,"d":"4.74E-59"},{"v":1.18e-56,"d":"1.18E-56"},"SNARE associated Golgi protein family.","AT5G54000",null,189.16,4.4948,0.2688,16.722,{"v":9.07e-63,"d":"9.07E-63"},2.19E-60,"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT3G26330","CYP71B37",1208.3,-2.3929,0.11865,-20.169,{"v":1.85e-90,"d":"1.85E-90"},4.31E-88,"full_name=cytochrome P450, family 71, subfamily B, polypeptide 37. cytochrome P450, family 71, subfamily B, polypeptide 37. putative cytochrome P450","AT1G70290","TPS8",446.68,2.2096,0.14432,15.31,{"v":6.54e-53,"d":"6.54E-53"},{"v":1.49e-50,"d":"1.49E-50"},"full_name=trehalose-6-phosphatase synthase S8. trehalose-6-phosphatase synthase S8. Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants."]
["AT3G56350",null,5830.7,2.0159,0.10827,18.619,2.25E-77,{"v":5.71e-75,"d":"5.71E-75"},"Iron/manganese superoxide dismutase family protein.","AT1G67740","PSBY",313.41,-2.702,0.16707,-16.173,{"v":7.77e-59,"d":"7.77E-59"},1.91E-56,"full_name=photosystem II BY. photosystem II BY. PsbY precursor (psbY) mRNA. This single nuclear gene is imported into the chloroplasts where it is processed into two integral membrane proteins with identical topology (PsbY-1 and PsbY-2). The protein appears to bind manganese but its role is not well understood.","AT4G25580",null,2116.9,2.7725,0.16645,16.657,{"v":2.71e-62,"d":"2.71E-62"},{"v":6.46e-60,"d":"6.46E-60"},"CAP160 protein.","AT2G37460","UMAMIT12",316.4,-4.6714,0.23269,-20.076,{"v":1.2e-89,"d":"1.20E-89"},{"v":2.76e-87,"d":"2.76E-87"},"full_name=Usually multiple acids move in and out Transporters 12. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT4G36010",null,380.23,3.1124,0.20505,15.179,{"v":4.91e-52,"d":"4.91E-52"},{"v":1.1e-49,"d":"1.10E-49"},"Pathogenesis-related thaumatin superfamily protein."]
["AT3G16140","PSAH-1",838.22,-2.2502,0.12112,-18.578,{"v":4.83e-77,"d":"4.83E-77"},{"v":1.21e-74,"d":"1.21E-74"},"full_name=photosystem I subunit H-1. photosystem I subunit H-1. Encodes subunit H of photosystem I reaction center subunit VI.","AT1G17010",null,169.72,5.1139,0.31739,16.112,{"v":2.09e-58,"d":"2.09E-58"},{"v":5.06e-56,"d":"5.06E-56"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT1G75830","LCR67",7256.4,6.3729,0.38414,16.59,{"v":8.23e-62,"d":"8.23E-62"},{"v":1.93e-59,"d":"1.93E-59"},"full_name=low-molecular-weight cysteine-rich 67. low-molecular-weight cysteine-rich 67. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","AT3G25290",null,248.62,-4.7801,0.23946,-19.962,1.17E-88,{"v":2.67e-86,"d":"2.67E-86"},"Auxin-responsive family protein.","AT5G22460",null,1095.9,-1.5881,0.10492,-15.136,9.44E-52,2.09E-49,"alpha/beta-Hydrolases superfamily protein."]
["AT3G15670","LEA76",10029,2.8987,0.15818,18.325,{"v":5.2e-75,"d":"5.20E-75"},{"v":1.28e-72,"d":"1.28E-72"},"Late embryogenesis abundant protein (LEA) family protein.","AT2G40170","GEA6",375.14,3.6502,0.2266,16.109,2.21E-58,{"v":5.27e-56,"d":"5.27E-56"},"full_name=LATE EMBRYOGENESIS ABUNDANT 6. Stress induced protein. Encodes a group 1 LEA gene that is activated by direct binding of ABI5 to its promoter and is involved in response to ABA. Is required for normal seed development. Involved in regulating the timing of dessication tolerance and rate of water loss during seed maturation.","AT5G56100",null,260.06,3.6141,0.21973,16.448,{"v":8.71e-61,"d":"8.71E-61"},{"v":2.02e-58,"d":"2.02E-58"},"glycine-rich protein / oleosin.","AT5G59220","HAI1",473.93,-3.9311,0.19783,-19.872,{"v":7.17e-88,"d":"7.17E-88"},{"v":1.6e-85,"d":"1.60E-85"},"full_name=highly ABA-induced PP2C gene 1. PP2C protein (Clade A protein phosphatases type 2C). Encodes a member of the PP2C family (Clade A protein phosphatases type 2C). Functions as a negative regulator of osmotic stress and ABA signaling.","AT5G64750","ABR1",1240.5,1.3248,0.087548,15.132,{"v":9.99e-52,"d":"9.99E-52"},{"v":2.18e-49,"d":"2.18E-49"},"full_name=ABA REPRESSOR1. Integrase-type DNA-binding superfamily protein. Encodes a putative transcription factor containing an AP2 domain. Is a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. Expressed in response to ABA, osmotic stress, sugar stress and drought. Mutants are hypersensitive to these stresses. May be involved in regulation of ABA mediated stress response."]
["AT5G23190","CYP86B1",1681,-1.7937,0.098078,-18.288,{"v":1.03e-74,"d":"1.03E-74"},{"v":2.5e-72,"d":"2.50E-72"},"full_name=cytochrome P450, family 86, subfamily B, polypeptide 1. cytochrome P450, family 86, subfamily B, polypeptide 1. cytochrome P450 CYP86B1, nuclear gene for chloroplast product. CYP86B1 is a very long chain fatty acid hydroxylase specifically involved in polyester monomer biosynthesis during the course of plant development.","AT1G79040","PSBR",683.97,-2.6131,0.16261,-16.07,4.15E-58,{"v":9.77e-56,"d":"9.77E-56"},"full_name=photosystem II subunit R. photosystem II subunit R. Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ.","AT1G30120","PDH-E1 BETA",291.21,-2.8324,0.17273,-16.398,{"v":1.98e-60,"d":"1.98E-60"},{"v":4.53e-58,"d":"4.53E-58"},"full_name=pyruvate dehydrogenase E1 beta. pyruvate dehydrogenase E1 beta. Encodes a putative plastid pyruvate dehydrogenase E1 beta subunit that is distinct from the mitochondrial pyruvate dehydrogenase E1 beta subunit.","AT2G41260","M17",8458.9,7.6817,0.3866,19.87,{"v":7.42e-88,"d":"7.42E-88"},{"v":1.64e-85,"d":"1.64E-85"},"glycine-rich protein / late embryogenesis abundant protein (M17). Late-embryogenesis-abundant gene. Involved in the acquisition of desiccation tolerance during late phase of embryogenesis.","AT2G30620","H1.2",366.69,-2.1913,0.14495,-15.117,1.24E-51,{"v":2.67e-49,"d":"2.67E-49"},"winged-helix DNA-binding transcription factor family protein."]
["AT5G07475",null,232.34,-3.7792,0.20674,-18.28,{"v":1.2e-74,"d":"1.20E-74"},{"v":2.88e-72,"d":"2.88E-72"},"Cupredoxin superfamily protein.","AT2G23190","CYP81D7",187.88,-5.25,0.32766,-16.022,{"v":8.91e-58,"d":"8.91E-58"},{"v":2.07e-55,"d":"2.07E-55"},"full_name=cytochrome P450, family 81, subfamily D, polypeptide 7. cytochrome P450, family 81, subfamily D, polypeptide 7. member of CYP81D","AT5G53895",null,1153.3,3.4935,0.21311,16.393,{"v":2.16e-60,"d":"2.16E-60"},{"v":4.87e-58,"d":"4.87E-58"},"hypothetical protein.","AT3G44460","DPBF2",332.13,-4.9116,0.24742,-19.851,1.08E-87,{"v":2.32e-85,"d":"2.32E-85"},"Basic-leucine zipper (bZIP) transcription factor family protein. basic leucine zipper transcription factor (BZIP67), identical to basic leucine zipper transcription factor GI:18656053 from (Arabidopsis thaliana); identical to cDNA basic leucine zipper transcription factor (atbzip67 gene) GI:18656052. Located in the nucleus and expressed during seed maturation in the cotyledons.","AT1G74310","HSP101",9238.4,-0.99699,0.065993,-15.108,1.44E-51,{"v":3.06e-49,"d":"3.06E-49"},"full_name=heat shock protein 101. heat shock protein 101. Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature."]
["AT1G72570","AIL1",286.22,3.1026,0.17032,18.216,{"v":3.83e-74,"d":"3.83E-74"},9.06E-72,"Integrase-type DNA-binding superfamily protein.","AT5G35360","CAC2",2459.6,-1.4592,0.091599,-15.93,3.89E-57,{"v":8.93e-55,"d":"8.93E-55"},"full_name=acetyl Co-enzyme a carboxylase biotin carboxylase subunit. acetyl Co-enzyme a carboxylase biotin carboxylase subunit. Encodes biotin carboxylase subunit (CAC2).","AT1G53540","HSP17.6C",184.07,5.5571,0.34219,16.24,{"v":2.64e-59,"d":"2.64E-59"},{"v":5.88e-57,"d":"5.88E-57"},"HSP20-like chaperones superfamily protein.","AT1G04660",null,1736.4,-4.2858,0.2159,-19.851,1.08E-87,{"v":2.32e-85,"d":"2.32E-85"},"glycine-rich protein.","AT4G11911",null,268.95,3.1645,0.21162,14.954,{"v":1.48e-50,"d":"1.48E-50"},{"v":3.09e-48,"d":"3.09E-48"},"STAY-GREEN-like protein."]
["AT1G15820","LHCB6",1619.5,-1.8589,0.10228,-18.175,{"v":8.12e-74,"d":"8.12E-74"},{"v":1.9E-71,"d":"1.90E-71"},"full_name=light harvesting complex photosystem II subunit 6. light harvesting complex photosystem II subunit 6. Lhcb6 protein (Lhcb6), light harvesting complex of photosystem II.","AT2G44470","BGLU29",2520.6,-1.6045,0.10082,-15.914,{"v":5.1E-57,"d":"5.10E-57"},{"v":1.15e-54,"d":"1.15E-54"},"full_name=beta glucosidase 29. beta glucosidase 29.","AT1G08170",null,640.5,3.3907,0.20958,16.179,{"v":7.13e-59,"d":"7.13E-59"},1.56E-56,"Histone superfamily protein.","AT1G22430",null,349.41,-3.1267,0.15781,-19.813,{"v":2.31e-87,"d":"2.31E-87"},{"v":4.9e-85,"d":"4.90E-85"},"GroES-like zinc-binding dehydrogenase family protein.","AT5G07290","ML4",2549.5,1.1853,0.079602,14.89,3.82E-50,{"v":7.9e-48,"d":"7.90E-48"},"full_name=MEI2-like 4. MEI2-like 4. AML4 A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML4 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM14. AML4 is expressed during embryo development (heart and torpedo stage) and in vegetative and floral apices."]
["AT5G22500","FAR1",418.18,-3.1006,0.17449,-17.77,1.22E-70,{"v":2.8e-68,"d":"2.80E-68"},"full_name=fatty acid reductase 1. fatty acid reductase 1. Encodes a member of the eight-member gene family encoding alcohol-forming fatty acyl-CoA reductases (FARs) identified in Arabidopsis thaliana. Three of the FARs, FAR1 (At5g22500), FAR4 (At3g44540) and FAR5 (At3g44550), are shown to generate the fatty alcohols found in root, seed coat, and wound-induced leaf tissue.","AT3G17840","RLK902",231.15,-3.3171,0.2085,-15.909,{"v":5.45e-57,"d":"5.45E-57"},1.22E-54,"full_name=receptor-like kinase 902. receptor-like kinase 902. Encodes a receptor-like kinase found at the cell surface of various tissues. Its function remains unknown.","AT2G46240","BAG6",355.5,2.9165,0.1805,16.158,9.99E-59,{"v":2.16e-56,"d":"2.16E-56"},"full_name=BCL-2-associated athanogene 6. BCL-2-associated athanogene 6. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Expression of BAG6 in leaves was strongly induced by heat stress. Knockout mutants exhibited enhanced susceptibility to fungal pathogen Botrytis cinerea. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.","AT5G38780",null,337.82,3.4239,0.17484,19.583,{"v":2.16e-85,"d":"2.16E-85"},{"v":4.53e-83,"d":"4.53E-83"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT2G39210","PIC30",651.94,-1.6833,0.11328,-14.86,{"v":6.02e-50,"d":"6.02E-50"},{"v":1.23e-47,"d":"1.23E-47"},"Major facilitator superfamily protein."]
["AT1G51400",null,506.68,-2.5479,0.14506,-17.565,{"v":4.59e-69,"d":"4.59E-69"},1.04E-66,"Photosystem II 5 kD protein.","AT1G25410","IPT6",225.06,-3.8033,0.23966,-15.869,{"v":1.03e-56,"d":"1.03E-56"},{"v":2.28e-54,"d":"2.28E-54"},"full_name=isopentenyltransferase 6. isopentenyltransferase 6. AB061404 Arabidopsis thaliana AtIPT6 mRNA for cytokinin synthase, complete cds","AT1G62000","TBA1",36623,-2.9077,0.18005,-16.15,1.14E-58,{"v":2.44e-56,"d":"2.44E-56"},"transmembrane protein.","AT3G27200",null,288.58,-6.0391,0.30982,-19.493,{"v":1.27e-84,"d":"1.27E-84"},{"v":2.63e-82,"d":"2.63E-82"},"Cupredoxin superfamily protein.","AT5G47880","ERF1-1",1479.5,1.0679,0.07309,14.611,{"v":2.4E-48,"d":"2.40E-48"},{"v":4.83e-46,"d":"4.83E-46"},"full_name=eukaryotic release factor 1-1. eukaryotic release factor 1-1. Encodes a eukaryotic release factor 1 homolog. Cosuppression of the gene's expression results affects cell elongation of the inflorescence stem, specifically the internodes, and radial cell division. Expression of the protein is primarily observed in the vascular system and in actively growing and elongating zones."]
["AT1G78370","GSTU20",960.28,-2.1537,0.12279,-17.54,{"v":7.13e-69,"d":"7.13E-69"},{"v":1.6e-66,"d":"1.60E-66"},"full_name=glutathione S-transferase TAU 20. glutathione S-transferase TAU 20. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","AT3G15670","LEA76",31618,1.5262,0.096409,15.83,1.92E-56,{"v":4.18e-54,"d":"4.18E-54"},"Late embryogenesis abundant protein (LEA) family protein.","AT3G61040","CYP76C7",589.2,3.3729,0.20907,16.133,{"v":1.5E-58,"d":"1.50E-58"},3.17E-56,"full_name=cytochrome P450, family 76, subfamily C, polypeptide 7. cytochrome P450, family 76, subfamily C, polypeptide 7. encodes a protein with cytochrome P450 domain","AT2G33830","DRM2",832.49,4.2081,0.21625,19.459,2.44E-84,{"v":4.97e-82,"d":"4.97E-82"},"Dormancy/auxin associated family protein.","AT1G02700",null,6890.7,-1.1955,0.081953,-14.588,{"v":3.35e-48,"d":"3.35E-48"},{"v":6.67e-46,"d":"6.67E-46"},"GATA transcription factor-like protein."]
["AT2G21100",null,234.41,-3.728,0.21333,-17.475,{"v":2.22e-68,"d":"2.22E-68"},{"v":4.92e-66,"d":"4.92E-66"},"Disease resistance-responsive (dirigent-like protein) family protein.","AT1G78070",null,458.42,2.0207,0.12795,15.792,{"v":3.53e-56,"d":"3.53E-56"},{"v":7.6e-54,"d":"7.60E-54"},"Transducin/WD40 repeat-like superfamily protein.","AT4G36700",null,8174.8,-1.5079,0.093515,-16.125,{"v":1.7e-58,"d":"1.70E-58"},{"v":3.55e-56,"d":"3.55E-56"},"RmlC-like cupins superfamily protein.","AT5G57260","CYP71B10",1017,2.1069,0.10844,19.43,{"v":4.34e-84,"d":"4.34E-84"},{"v":8.74e-82,"d":"8.74E-82"},"full_name=cytochrome P450, family 71, subfamily B, polypeptide 10. cytochrome P450, family 71, subfamily B, polypeptide 10. putative cytochrome P450","AT5G62520","SRO5",192.78,2.9095,0.20007,14.542,{"v":6.53e-48,"d":"6.53E-48"},1.28E-45,"full_name=similar to RCD one 5. similar to RCD one 5. Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response."]
["AT4G24140",null,373.97,-2.9158,0.16718,-17.441,{"v":4.05e-68,"d":"4.05E-68"},{"v":8.88e-66,"d":"8.88E-66"},"alpha/beta-Hydrolases superfamily protein.","AT1G23000","ATHMP05",193.06,-3.4153,0.21696,-15.742,{"v":7.81e-56,"d":"7.81E-56"},1.66E-53,"Heavy metal transport/detoxification superfamily protein.","AT4G10270","WIP4",392.78,-2.553,0.15858,-16.099,{"v":2.6e-58,"d":"2.60E-58"},{"v":5.37e-56,"d":"5.37E-56"},"Wound-responsive family protein.","AT3G58200",null,645.38,-2.0176,0.10433,-19.338,{"v":2.55e-83,"d":"2.55E-83"},{"v":5.07e-81,"d":"5.07E-81"},"TRAF-like family protein.","AT1G77950","AGL67",3798.1,-1.0848,0.075266,-14.412,{"v":4.32e-47,"d":"4.32E-47"},{"v":8.38e-45,"d":"8.38E-45"},"full_name=AGAMOUS-like 67. AGAMOUS-like 67."]
["AT1G01480","ACS2",737.87,2.0945,0.12082,17.337,{"v":2.49e-67,"d":"2.49E-67"},{"v":5.39e-65,"d":"5.39E-65"},"full_name=1-amino-cyclopropane-1-carboxylate synthase 2. 1-amino-cyclopropane-1-carboxylate synthase 2. a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family, isolated from a flower-specific cDNA library.","AT2G47230","DUF6",368.51,-2.1432,0.13622,-15.733,{"v":9e-56,"d":"9.00E-56"},{"v":1.89e-53,"d":"1.89E-53"},"full_name=DOMAIN OF UNKNOWN FUNCTION 724 6. agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 6). Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins.","AT1G65880","BZO1",258.62,-4.3913,0.2737,-16.044,6.29E-58,{"v":1.28e-55,"d":"1.28E-55"},"full_name=benzoyloxyglucosinolate 1. benzoyloxyglucosinolate 1. Encodes a benzoate-CoA ligase. Involved in the biosynthesis of benzoyloxyglucosinolate in Arabidopsis seeds.","AT3G60290",null,331.72,-3.0268,0.157,-19.279,{"v":8.14e-83,"d":"8.14E-83"},{"v":1.6e-80,"d":"1.60E-80"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT1G14950",null,18796,-1.0073,0.069949,-14.401,{"v":5.13e-47,"d":"5.13E-47"},{"v":9.85e-45,"d":"9.85E-45"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein."]
["AT1G03130","PSAD-2",761.55,-1.9224,0.1113,-17.272,{"v":7.61e-67,"d":"7.61E-67"},{"v":1.63e-64,"d":"1.63E-64"},"full_name=photosystem I subunit D-2. photosystem I subunit D-2. Encodes a protein predicted by sequence similarity with spinach PsaD to be photosystem I reaction center subunit II (PsaD2)","AT4G09610","GASA2",1469.5,2.0846,0.13304,15.669,{"v":2.45e-55,"d":"2.45E-55"},{"v":5.07e-53,"d":"5.07E-53"},"full_name=GAST1 protein homolog 2. GAST1 protein homolog 2.","AT3G50970","LTI30",2956.6,2.2469,0.14011,16.038,{"v":6.99e-58,"d":"6.99E-58"},1.41E-55,"full_name=LOW TEMPERATURE-INDUCED 30. dehydrin family protein. Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. LTI29 and LTI30 double overexpressors confer freeze tolerance. Located in membranes. mRNA upregulated by water deprivation and abscisic acid.","AT1G78500","PEN6",384.49,-6.2032,0.32358,-19.17,{"v":6.57e-82,"d":"6.57E-82"},1.28E-79,"Terpenoid cyclases family protein. Encodes a protein with pentacyclic triterpene synthase activity. In addition to the compounds lupeol, &#945;-amyrin and bauerenol, this enzyme was also shown to produce two <i>seco</i>-triterpenes: &#945;- and &#946;-<i>seco</i>-amyrin.","AT2G36780",null,517.62,1.792,0.12452,14.391,{"v":5.9e-47,"d":"5.90E-47"},{"v":1.12e-44,"d":"1.12E-44"},"UDP-Glycosyltransferase superfamily protein."]
["AT2G30210","LAC3",237.91,-5.6322,0.32651,-17.25,1.12E-66,{"v":2.37e-64,"d":"2.37E-64"},"full_name=laccase 3. laccase 3. putative laccase, a member of laccase family of genes (17 members in Arabidopsis).","AT3G20810","JMJD5",444.23,-2.1926,0.14022,-15.637,{"v":4.07e-55,"d":"4.07E-55"},{"v":8.34e-53,"d":"8.34E-53"},"full_name=jumonji domain containing 5. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. JMJD5 encodes a protein which contains a jumonji-C (jmjC) domain. jmjd5 mutant plants have a short-period circadian phenotype. JMJD5 has histone demethylase activity and interacts with EFM to repress FT.","AT5G39520","CSAP",537.54,2.6476,0.16511,16.036,{"v":7.19e-58,"d":"7.19E-58"},1.43E-55,"hypothetical protein (DUF1997).","AT3G07310",null,539.75,2.286,0.11934,19.156,{"v":8.59e-82,"d":"8.59E-82"},{"v":1.65e-79,"d":"1.65E-79"},"phosphoserine aminotransferase, putative (DUF760).","AT3G50060","MYB77",858.63,1.441,0.1002,14.382,{"v":6.71e-47,"d":"6.71E-47"},{"v":1.26e-44,"d":"1.26E-44"},"full_name=myb domain protein 77. myb domain protein 77. Encodes a member of the R2R3 transcription factor gene family. Expressed in response to potassium deprivation and auxin. Involved in lateral root development. Interacts with ARF7 and regulates the expression of some auxin responsive genes."]
["AT1G61520","LHCA3",2017.9,-1.9573,0.11353,-17.241,1.31E-66,{"v":2.74e-64,"d":"2.74E-64"},"full_name=photosystem I light harvesting complex gene 3. PSI type III chlorophyll a/b-binding protein. PSI type III chlorophyll a/b-binding protein (Lhca3*1)","AT1G12900","GAPA-2",206.15,-5.6873,0.36527,-15.57,1.16E-54,2.36E-52,"full_name=glyceraldehyde 3-phosphate dehydrogenase A subunit 2. glyceraldehyde 3-phosphate dehydrogenase A subunit 2.","AT5G07360",null,1618.1,2.5319,0.15825,16,1.28E-57,{"v":2.52e-55,"d":"2.52E-55"},"Amidase family protein.","AT5G50315",null,615.83,-2.7651,0.14497,-19.074,{"v":4.19e-81,"d":"4.19E-81"},{"v":7.96e-79,"d":"7.96E-79"},"transposable_element_gene.","AT5G66430",null,1974.4,-1.714,0.11938,-14.357,{"v":9.63e-47,"d":"9.63E-47"},{"v":1.78e-44,"d":"1.78E-44"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein."]
["AT2G01200","IAA32",333.79,3.0238,0.17794,16.993,{"v":9.28e-65,"d":"9.28E-65"},1.92E-62,"full_name=indole-3-acetic acid inducible 32. indole-3-acetic acid inducible 32. Belongs to auxin inducible gene family.","AT1G55670","PSAG",164.19,-4.8152,0.31118,-15.474,{"v":5.19e-54,"d":"5.19E-54"},{"v":1.04e-51,"d":"1.04E-51"},"full_name=photosystem I subunit G. photosystem I subunit G. Encodes subunit G of photosystem I, an 11-kDa membrane protein that plays an important role in electron transport between plastocyanin and PSI and is involved in the stability of the PSI complex. PSI-G subunit is bound to PSI-B and is in contact with Lhca1. The protein inserts into thylakoids by a direct or spontaneous pathway that does not involve the activities of any known chloroplast protein-targeting machinery. PSI-G appears to be directly or indirectly involved in the interaction between Photosystem I and plastocyanin.","AT5G52300","LTI65",6098.9,1.8615,0.11645,15.985,{"v":1.62e-57,"d":"1.62E-57"},3.14E-55,"full_name=LOW-TEMPERATURE-INDUCED 65. CAP160 protein. encodes a protein that is induced in expression in response to water deprivation such as cold, high-salt, and dessication. The response appears to be via abscisic acid. The promoter region contains two ABA-responsive elements (ABREs) that are required for the dehydration-responsive expression of rd29B as cis-acting elements. Protein is a member of a gene family with other members found plants, animals and fungi.","AT5G51970","ATSDH",1691.9,1.4639,0.076848,19.05,{"v":6.6e-81,"d":"6.60E-81"},1.24E-78,"GroES-like zinc-binding alcohol dehydrogenase family protein. Encodes a putative sorbitol dehydrogenase that can be thiolated in vitro.","AT1G03990",null,2179.4,-1.1712,0.081667,-14.341,{"v":1.21e-46,"d":"1.21E-46"},{"v":2.21e-44,"d":"2.21E-44"},"Long-chain fatty alcohol dehydrogenase family protein."]
["AT3G11050","FER2",2029.8,1.9674,0.11648,16.89,{"v":5.33e-64,"d":"5.33E-64"},{"v":1.09e-61,"d":"1.09E-61"},"full_name=ferritin 2. ferritin 2.","AT3G29030","EXPA5",863.17,-2.2644,0.14879,-15.219,2.64E-52,{"v":5.23e-50,"d":"5.23E-50"},"full_name=expansin A5. expansin A5. Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)","AT4G11310","CP1",19745,1.6404,0.10415,15.75,{"v":6.86e-56,"d":"6.86E-56"},1.32E-53,"Papain family cysteine protease. cysteine proteinase precursor-like protein","AT5G24590","TIP",798.93,-1.9618,0.10322,-19.005,{"v":1.55e-80,"d":"1.55E-80"},{"v":2.88e-78,"d":"2.88E-78"},"full_name=TCV-interacting protein. TCV-interacting protein. Member of NAc protein family. Interacts with turnip crinkle virus (TCV) capsid protein. Transcription factor involved in regulating the defense response of Arabidopsis to TCV.","AT4G25130","PMSR4",2167.8,-1.0579,0.073958,-14.304,{"v":2.08e-46,"d":"2.08E-46"},{"v":3.76e-44,"d":"3.76E-44"},"full_name=peptide met sulfoxide reductase 4. peptide met sulfoxide reductase 4. Encodes a chloroplast-localized methionine sulfoxide reductase that is a member of the MSRA family. Involved in protection of chloroplasts from oxidative stress."]
["AT1G03790","SOM",930.67,2.3588,0.13976,16.877,{"v":6.61e-64,"d":"6.61E-64"},1.34E-61,"full_name=SOMNUS. Zinc finger C-x8-C-x5-C-x3-H type family protein. Encodes SOMNUS (SOM), a nucleus-localized CCCH-type zinc finger protein. SOM negatively regulates light-dependent seed germination downstream of PIL5 (AT2G20180).","AT4G10340","LHCB5",156.31,-5.0365,0.33176,-15.181,{"v":4.73e-52,"d":"4.73E-52"},{"v":9.25e-50,"d":"9.25E-50"},"full_name=light harvesting complex of photosystem II 5. light harvesting complex of photosystem II 5. photosystem II encoding the light-harvesting chlorophyll a/b binding protein CP26 of the antenna system of the photosynthetic apparatus","AT5G07500","PEI1",1010.7,-2.2489,0.14314,-15.711,1.27E-55,{"v":2.41e-53,"d":"2.41E-53"},"Zinc finger C-x8-C-x5-C-x3-H type family protein. Encodes an embryo-specific zinc finger transcription factor required for heart-stage embryo formation.","AT1G14170",null,552.82,-2.1417,0.11315,-18.928,{"v":6.66e-80,"d":"6.66E-80"},1.22E-77,"RNA-binding KH domain-containing protein.","AT3G44880","ACD1",405.56,-1.7995,0.12586,-14.298,{"v":2.26e-46,"d":"2.26E-46"},{"v":4.04e-44,"d":"4.04E-44"},"full_name=ACCELERATED CELL DEATH 1. Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein. Encodes a pheide a oxygenase (PAO). Accelerated cell death (acd1) mutants show rapid, spreading necrotic responses to both virulent and avirulent Pseudomonas syringae pv. maculicola or pv. tomato pathogens and to ethylene."]
["AT1G14930",null,1218.7,7.1983,0.42823,16.809,2.08E-63,{"v":4.16e-61,"d":"4.16E-61"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein.","AT3G02410","ICME-LIKE2",494.83,2.0693,0.13653,15.156,6.94E-52,{"v":1.34e-49,"d":"1.34E-49"},"full_name=Isoprenylcysteine methylesterase-like 2. alpha/beta-Hydrolases superfamily protein.","AT5G35360","CAC2",669.52,-2.3394,0.14902,-15.699,{"v":1.54e-55,"d":"1.54E-55"},{"v":2.9e-53,"d":"2.90E-53"},"full_name=acetyl Co-enzyme a carboxylase biotin carboxylase subunit. acetyl Co-enzyme a carboxylase biotin carboxylase subunit. Encodes biotin carboxylase subunit (CAC2).","AT4G01610","ATCATHB3",1293.6,-2.592,0.13696,-18.925,{"v":7.03e-80,"d":"7.03E-80"},1.28E-77,"Cysteine proteinases superfamily protein.","AT3G15260",null,7663.9,-0.99016,0.069376,-14.272,{"v":3.25e-46,"d":"3.25E-46"},{"v":5.75e-44,"d":"5.75E-44"},"Protein phosphatase 2C family protein."]
["AT4G02280","SUS3",2399,2.0543,0.1226,16.756,{"v":5.15e-63,"d":"5.15E-63"},{"v":1.02e-60,"d":"1.02E-60"},"full_name=sucrose synthase 3. sucrose synthase 3. Encodes a protein with sucrose synthase activity (SUS3). It appears to be important for sucrose metabolism in developing seeds, especially during the late maturation phase, about 18 days after flowering.","AT4G36280","CRH1",291.48,-2.5018,0.16625,-15.048,{"v":3.55e-51,"d":"3.55E-51"},{"v":6.81e-49,"d":"6.81E-49"},"full_name=CRT1 Homologue 1. Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein.","AT5G39720","AIG2L",4826.7,2.4138,0.15382,15.693,1.69E-55,{"v":3.13e-53,"d":"3.13E-53"},"full_name=avirulence induced gene 2 like protein. avirulence induced protein 2 like protein.","AT1G62060","TBA2",405.63,-6.8175,0.36117,-18.876,{"v":1.79e-79,"d":"1.79E-79"},{"v":3.21e-77,"d":"3.21E-77"},"transmembrane protein.","AT5G17190",null,1398.5,-1.266,0.089158,-14.199,{"v":9.29e-46,"d":"9.29E-46"},{"v":1.62e-43,"d":"1.62E-43"},"B-cell receptor-associated-like protein."]
["AT4G17280",null,576.2,-2.0489,0.12294,-16.665,{"v":2.36e-62,"d":"2.36E-62"},{"v":4.61e-60,"d":"4.61E-60"},"Auxin-responsive family protein.","AT5G13930","TT4",1027.3,-2.1514,0.1432,-15.024,5.14E-51,{"v":9.64e-49,"d":"9.64E-49"},"full_name=TRANSPARENT TESTA 4. Chalcone and stilbene synthase family protein. Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.","AT1G17010",null,1198.8,2.9146,0.18582,15.685,{"v":1.91e-55,"d":"1.91E-55"},{"v":3.51e-53,"d":"3.51E-53"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT1G02500","SAM1",386.89,-3.1261,0.16574,-18.861,2.37E-79,{"v":4.21e-77,"d":"4.21E-77"},"full_name=S-adenosylmethionine synthetase 1. S-adenosylmethionine synthetase 1. encodes a S-adenosylmethionine synthetase. SAM1 is regulated by protein S-nitrosylation. The covalent binding of nitric oxide (NO) to the Cys114 residue inhibits the enzyme activity.","AT2G47180","GolS1",5798.1,-0.91774,0.064653,-14.195,{"v":9.87e-46,"d":"9.87E-46"},{"v":1.71e-43,"d":"1.71E-43"},"full_name=galactinol synthase 1. galactinol synthase 1. GolS1 is a galactinol synthase that catalyzes the formation of galactinol from UDP-galactose and myo-inositol. GolS1 transcript levels rise in response to methyl viologen, an oxidative damage-inducing agent. Plants over-expressing GolS1 have increased tolerance to salt, chilling, and high-light stress."]
["AT1G29000","ATHMP06",185.23,-3.795,0.22923,-16.556,1.46E-61,2.82E-59,"Heavy metal transport/detoxification superfamily protein.","AT4G39900",null,477.36,-1.9118,0.12725,-15.024,{"v":5.15e-51,"d":"5.15E-51"},{"v":9.64e-49,"d":"9.64E-49"},"adenine deaminase.","AT1G22710","SUC2",1212.4,-1.6749,0.10696,-15.66,{"v":2.85e-55,"d":"2.85E-55"},{"v":5.19e-53,"d":"5.19E-53"},"full_name=sucrose-proton symporter 2. sucrose-proton symporter 2. Encodes for a high-affinity transporter essential for phloem loading and long-distance transport. A major sucrose transporter, AtSUC2 can also transport a wide range of physiological and synthetic glucose conjugates with both &#945;- or &#946;-linkage.","AT4G34710","ADC2",1472.9,-3.2452,0.17209,-18.858,2.54E-79,{"v":4.47e-77,"d":"4.47E-77"},"full_name=arginine decarboxylase 2. arginine decarboxylase 2. encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. ADC2 is stress-inducible (osmotic stress). Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Overexpression causes phenotypes similar to GA-deficient plants and these plants show reduced levels of GA due to lower expression levels of AtGA20ox1, AtGA3ox3 and AtGA3ox1.","AT5G24950","CYP71A15",306.09,-2.4648,0.17402,-14.163,1.54E-45,2.64E-43,"full_name=cytochrome P450, family 71, subfamily A, polypeptide 15. cytochrome P450, family 71, subfamily A, polypeptide 15. putative cytochrome P450"]
["AT5G38520","CLD1",197.52,-3.6861,0.22288,-16.538,{"v":1.95e-61,"d":"1.95E-61"},{"v":3.73e-59,"d":"3.73E-59"},"alpha/beta-Hydrolases superfamily protein.","AT1G47840","HXK3",146.01,-3.7468,0.24972,-15.004,{"v":6.89e-51,"d":"6.89E-51"},1.28E-48,"full_name=hexokinase 3. hexokinase 3. Encodes a putative hexokinase.","AT3G12955","SAUR74",189.76,3.2413,0.20935,15.483,{"v":4.54e-54,"d":"4.54E-54"},{"v":8.16e-52,"d":"8.16E-52"},"SAUR-like auxin-responsive protein family.","AT1G22710","SUC2",288.89,-6.517,0.34609,-18.831,{"v":4.24e-79,"d":"4.24E-79"},7.37E-77,"full_name=sucrose-proton symporter 2. sucrose-proton symporter 2. Encodes for a high-affinity transporter essential for phloem loading and long-distance transport. A major sucrose transporter, AtSUC2 can also transport a wide range of physiological and synthetic glucose conjugates with both &#945;- or &#946;-linkage.","AT1G14940",null,7577.2,-1.7037,0.12034,-14.157,{"v":1.7E-45,"d":"1.70E-45"},{"v":2.87e-43,"d":"2.87E-43"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein."]
["AT1G74460",null,410.84,-2.256,0.1365,-16.528,{"v":2.31e-61,"d":"2.31E-61"},4.38E-59,"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT2G36270","ABI5",642.47,1.8661,0.12443,14.998,{"v":7.61e-51,"d":"7.61E-51"},{"v":1.4E-48,"d":"1.40E-48"},"full_name=ABA INSENSITIVE 5. Basic-leucine zipper (bZIP) transcription factor family protein. Encodes a member of the basic leucine zipper transcription factor family, involved in ABA signalling during seed maturation and germination. The Arabidopsis abscisic acid (ABA)-insensitive abi5 mutants have pleiotropic defects in ABA response, including decreased sensitivity to ABA inhibition of germination and altered expression of some ABA-regulated genes. Comparison of seed and ABA-inducible vegetative gene expression in wild-type and abi5-1 plants indicates that ABI5 regulates a subset of late embryogenesis-abundant genes during both developmental stages.","AT1G54050","HSP17.4B",519.35,3.4752,0.22626,15.359,{"v":3.06e-53,"d":"3.06E-53"},{"v":5.45e-51,"d":"5.45E-51"},"HSP20-like chaperones superfamily protein.","AT5G55620",null,451.39,-7.2426,0.3854,-18.793,{"v":8.67e-79,"d":"8.67E-79"},{"v":1.49e-76,"d":"1.49E-76"},"hypothetical protein.","AT4G25670","DOB1",303.63,2.0035,0.142,14.109,{"v":3.32e-45,"d":"3.32E-45"},{"v":5.57e-43,"d":"5.57E-43"},"stress response NST1-like protein."]
["AT3G22620","LTPG20",415.8,-2.4909,0.15074,-16.525,2.44E-61,{"v":4.58e-59,"d":"4.58E-59"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT5G03860","MLS",1879.8,1.6515,0.11089,14.894,{"v":3.62e-50,"d":"3.62E-50"},{"v":6.57e-48,"d":"6.57E-48"},"full_name=malate synthase. malate synthase. Encodes a protein with malate synthase activity.","AT1G27030",null,253.65,3.1393,0.20468,15.337,{"v":4.3E-53,"d":"4.30E-53"},{"v":7.56e-51,"d":"7.56E-51"},"hypothetical protein.","AT3G04170",null,505.96,-6.1489,0.32751,-18.775,{"v":1.21e-78,"d":"1.21E-78"},2.06E-76,"RmlC-like cupins superfamily protein.","AT4G18920",null,893.69,1.6,0.11411,14.021,1.15E-44,1.91E-42,"histone acetyltransferase (DUF1264)."]
["AT1G24735",null,1201.2,1.6217,0.098496,16.464,{"v":6.61e-61,"d":"6.61E-61"},1.23E-58,"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT3G57020",null,2489.1,1.4809,0.099541,14.878,{"v":4.6e-50,"d":"4.60E-50"},{"v":8.26e-48,"d":"8.26E-48"},"Calcium-dependent phosphotriesterase superfamily protein.","AT2G26330","ER",227.87,-3.0101,0.19703,-15.277,{"v":1.09e-52,"d":"1.09E-52"},{"v":1.9E-50,"d":"1.90E-50"},"full_name=ERECTA. Leucine-rich receptor-like protein kinase family protein. Homologous to receptor protein kinases. Involved in specification of organs originating from the shoot apical meristem. Contains a cytoplasmic protein kinase catalytic domain, a transmembrane region, and an extracellular leucine-rich repeat. ER has been identified as a quantitative trait locus for transpiration efficiency by influencing epidermal and mesophyll development, stomatal density and porosity of leaves. It has been implicated in resistance to the bacterium Ralstonia solanacearum and to the necrotrophic fungus Plectosphaerella cucumerina. Together with ERL1 and ERL2, ER governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes.","AT5G64080","XYP1",2978,-2.2388,0.11925,-18.774,1.23E-78,{"v":2.08e-76,"d":"2.08E-76"},"full_name=xylogen protein 1. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT1G14930",null,6081.5,-1.1883,0.084848,-14.004,{"v":1.46e-44,"d":"1.46E-44"},{"v":2.4E-42,"d":"2.40E-42"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein."]
["AT2G21720",null,842.52,2.3304,0.14172,16.443,{"v":9.38e-61,"d":"9.38E-61"},{"v":1.72e-58,"d":"1.72E-58"},"ArgH (DUF639).","AT2G20260","PSAE-2",182.73,-3.1038,0.20977,-14.796,{"v":1.56e-49,"d":"1.56E-49"},2.77E-47,"full_name=photosystem I subunit E-2. photosystem I subunit E-2. Encodes subunit E of photosystem I.","AT4G19170","NCED4",891.48,1.966,0.12916,15.222,{"v":2.54e-52,"d":"2.54E-52"},{"v":4.37e-50,"d":"4.37E-50"},"full_name=nine-cis-epoxycarotenoid dioxygenase 4. nine-cis-epoxycarotenoid dioxygenase 4. chloroplast-targeted member of a family of enzymes similar to nine-cis-epoxycarotenoid dioxygenase","AT3G46230","HSP17.4",46716,2.1919,0.11694,18.744,{"v":2.16e-78,"d":"2.16E-78"},{"v":3.6E-76,"d":"3.60E-76"},"full_name=heat shock protein 17.4. heat shock protein 17.4. member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds","AT2G42000","AtMT4a",6757,-1.5774,0.11266,-14.001,1.53E-44,2.48E-42,"full_name=Arabidopsis thaliana metallothionein 4a. plant EC metallothionein family protein. AtMT4a is a member of Type 4 metallothionein (MT) genes. It is involved in the early develoment of the embryo and in the accumulation of metal ions especially Zn in the seeds."]
["AT3G14420","GOX1",308.78,-2.5182,0.15336,-16.42,{"v":1.37e-60,"d":"1.37E-60"},2.48E-58,"full_name=glycolate oxidase 1. Aldolase-type TIM barrel family protein. Encodes a glycolate oxidase that modulates reactive oxygen species-mediated signal transduction during nonhost resistance.","AT3G16950","LPD1",686.54,-1.6833,0.11401,-14.765,{"v":2.47e-49,"d":"2.47E-49"},{"v":4.34e-47,"d":"4.34E-47"},"full_name=lipoamide dehydrogenase 1. lipoamide dehydrogenase 1. encodes a plastid lipoamide dehydrogenase, subunit of the pyruvate dehydrogenase complex which provides acetyl-CoA for de novo fatty acid biosynthesis. The gene is highly expressed in developing seeds.","AT1G16730","UP6",1223.3,2.1586,0.14213,15.187,{"v":4.31e-52,"d":"4.31E-52"},{"v":7.35e-50,"d":"7.35E-50"},"full_name=unknown protein 6. hypothetical protein.","AT1G14720","XTH28",526.99,-2.7836,0.14879,-18.708,{"v":4.23e-78,"d":"4.23E-78"},{"v":6.98e-76,"d":"6.98E-76"},"full_name=xyloglucan endotransglucosylase/hydrolase 28. xyloglucan endotransglucosylase/hydrolase 28. member of Glycoside Hydrolase Family 16","AT1G50420","SCL3",411.94,1.8085,0.12932,13.984,{"v":1.95e-44,"d":"1.95E-44"},{"v":3.14e-42,"d":"3.14E-42"},"full_name=scarecrow-like 3. scarecrow-like 3. Encodes a scarecrow-like protein (SCL3) Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay)."]
["AT3G50820","PSBO2",230.84,-6.3656,0.38782,-16.414,{"v":1.52e-60,"d":"1.52E-60"},2.74E-58,"full_name=photosystem II subunit O-2. photosystem II subunit O-2. Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In <i>Arabidopsis thaliana</i> the PsbO proteins are encoded by two genes: <i>psbO1</i> and <i>psbO2</i>. PsbO2 is the minor isoform in the wild-type. Mutants defective in this gene have been shown to be affected in the dephosphorylation of the D1 protein of PSII.","AT3G16140","PSAH-1",141.49,-4.232,0.28686,-14.753,{"v":2.94e-49,"d":"2.94E-49"},{"v":5.13e-47,"d":"5.13E-47"},"full_name=photosystem I subunit H-1. photosystem I subunit H-1. Encodes subunit H of photosystem I reaction center subunit VI.","AT1G02700",null,3394.2,1.7578,0.1158,15.18,{"v":4.8e-52,"d":"4.80E-52"},{"v":8.11e-50,"d":"8.11E-50"},"GATA transcription factor-like protein.","AT1G13640",null,1124.7,1.77,0.094619,18.707,{"v":4.34e-78,"d":"4.34E-78"},{"v":7.09e-76,"d":"7.09E-76"},"Phosphatidylinositol 3- and 4-kinase family protein.","AT4G19700","RING",610.12,2.1885,0.15662,13.973,{"v":2.28e-44,"d":"2.28E-44"},{"v":3.64e-42,"d":"3.64E-42"},"SBP (S-ribonuclease binding protein) family protein. Encodes BOI (Botrytis Susceptible 1 Interactor). Has E3 ubiquitin ligase activity. Interacts with and ubiquitinates BOS1 (Botrytis Susceptible 1). It prevents caspase activation and attenuates cell death."]
["AT3G56240","CCH",531.85,-2.382,0.14516,-16.41,1.64E-60,{"v":2.91e-58,"d":"2.91E-58"},"full_name=copper chaperone. copper chaperone. CCH protein belongs to a family of eukaryotic proteins that participate in intracellular copper homeostasis by delivering this metal to the secretory pathway; mainly located along the vascular bundles of senescing leaves and petioles as well as in stem sieve elements; hypothesized to have a role in copper mobilization from decaying organs towards reproductive structures, as a result of metalloprotein breakdown. The plant-specific C-terminal domain of the CCH protein forms amyloid-like fibrils in vitro.","AT5G66080","APD9",137.17,3.5682,0.24266,14.704,{"v":6.04e-49,"d":"6.04E-49"},{"v":1.04e-46,"d":"1.04E-46"},"Protein phosphatase 2C family protein.","AT1G27990",null,3525.6,1.5888,0.10578,15.02,{"v":5.42e-51,"d":"5.42E-51"},{"v":9.07e-49,"d":"9.07E-49"},"transmembrane protein.","AT3G12670","emb2742",1337.6,-2.2457,0.12006,-18.704,{"v":4.57e-78,"d":"4.57E-78"},{"v":7.39e-76,"d":"7.39E-76"},"full_name=embryo defective 2742. CTP synthase family protein.","AT4G18220",null,303.94,-2.1141,0.15144,-13.96,{"v":2.73e-44,"d":"2.73E-44"},{"v":4.31e-42,"d":"4.31E-42"},"Drug/metabolite transporter superfamily protein."]
["AT5G13630","GUN5",486.7,-2.3701,0.14457,-16.394,{"v":2.13e-60,"d":"2.13E-60"},3.75E-58,"full_name=GENOMES UNCOUPLED 5. magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH). Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.","AT1G66430","FRK3",689.27,-1.7054,0.11602,-14.699,6.54E-49,1.12E-46,"pfkB-like carbohydrate kinase family protein.","AT5G52640","HSP90.1",2277.4,2.5828,0.17209,15.009,{"v":6.46e-51,"d":"6.46E-51"},1.07E-48,"full_name=heat shock protein 90.1. heat shock-like protein. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance.","AT5G10860","CBSX3",1351.4,1.5531,0.083296,18.646,1.36E-77,{"v":2.18e-75,"d":"2.18E-75"},"full_name=CBS domain containing protein 3. Cystathionine beta-synthase (CBS) family protein. Encodes a single cystathionine beta-Synthase domain-containing protein. Modulates development by regulating the thioredoxin system.","AT3G05260",null,31805,-0.74718,0.053646,-13.928,{"v":4.29e-44,"d":"4.29E-44"},{"v":6.69e-42,"d":"6.69E-42"},"NAD(P)-binding Rossmann-fold superfamily protein."]
["AT3G04150",null,244.43,3.6268,0.22223,16.32,{"v":7.1e-60,"d":"7.10E-60"},1.24E-57,"RmlC-like cupins superfamily protein.","AT5G38160",null,1964.7,-2.0688,0.14081,-14.692,{"v":7.22e-49,"d":"7.22E-49"},1.22E-46,"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT2G39210","PIC30",334.65,2.9516,0.19745,14.948,{"v":1.6E-50,"d":"1.60E-50"},{"v":2.62e-48,"d":"2.62E-48"},"Major facilitator superfamily protein.","AT2G19570","CDA1",438.85,-2.8198,0.15137,-18.629,{"v":1.88e-77,"d":"1.88E-77"},{"v":2.98e-75,"d":"2.98E-75"},"full_name=cytidine deaminase 1. cytidine deaminase 1. Encodes a cytidine deaminase that deaminates cytidine and deoxycytidine and is competitively inhibited by cytosine-containing compounds.","AT1G29680",null,3098.7,-0.95445,0.068752,-13.882,{"v":8.09e-44,"d":"8.09E-44"},{"v":1.25e-41,"d":"1.25E-41"},"histone acetyltransferase (DUF1264)."]
["AT1G21310","EXT3",2245.8,-1.6263,0.10031,-16.214,{"v":4.02e-59,"d":"4.02E-59"},{"v":6.96e-57,"d":"6.96E-57"},"full_name=extensin 3. extensin 3. Encodes extensin 3.","AT3G29320","PHS1",534.72,-2.1716,0.14781,-14.691,{"v":7.31e-49,"d":"7.31E-49"},1.22E-46,"full_name=alpha-glucan phosphorylase 1. Glycosyl transferase, family 35. Encodes a plastidic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for maltooligosaccharides, such as maltoheptaose.","AT1G55360",null,230.56,-4.0203,0.26929,-14.929,{"v":2.14e-50,"d":"2.14E-50"},3.47E-48,"tRNA-splicing ligase (DUF239).","AT3G02470","SAMDC",5096.2,-1.7642,0.094742,-18.621,2.18E-77,{"v":3.43e-75,"d":"3.43E-75"},"full_name=S-adenosylmethionine decarboxylase. S-adenosylmethionine decarboxylase. Encodes a S-adenosylmethionine decarboxylase involved in polyamine biosynthesis.","AT4G18650","DOGL4",1067.3,-1.3885,0.10034,-13.838,{"v":1.5E-43,"d":"1.50E-43"},{"v":2.3e-41,"d":"2.30E-41"},"transcription factor-like protein. A maternally expressed imprinted gene."]
["AT2G16890",null,195.83,3.2436,0.20017,16.204,{"v":4.74e-59,"d":"4.74E-59"},{"v":8.11e-57,"d":"8.11E-57"},"UDP-Glycosyltransferase superfamily protein.","AT1G52670","BLP1",650.17,-1.6801,0.11442,-14.684,{"v":8.17e-49,"d":"8.17E-49"},{"v":1.36e-46,"d":"1.36E-46"},"Single hybrid motif superfamily protein.","AT4G36620","GATA19",281.18,3.5056,0.2377,14.748,{"v":3.18e-49,"d":"3.18E-49"},{"v":5.12e-47,"d":"5.12E-47"},"full_name=GATA transcription factor 19. GATA transcription factor 19. Encodes a member of the GATA factor family of zinc finger transcription factors.","AT3G48530","KING1",427.96,2.7153,0.14666,18.514,{"v":1.58e-76,"d":"1.58E-76"},{"v":2.46e-74,"d":"2.46E-74"},"full_name=SNF1-related protein kinase regulatory subunit gamma 1. SNF1-related protein kinase regulatory subunit gamma 1.","AT3G01570",null,20155,-0.67714,0.048993,-13.821,{"v":1.9e-43,"d":"1.90E-43"},{"v":2.88e-41,"d":"2.88E-41"},"Oleosin family protein."]
["AT1G77590","LACS9",1346.4,-1.8467,0.11414,-16.179,{"v":7.08e-59,"d":"7.08E-59"},{"v":1.2E-56,"d":"1.20E-56"},"full_name=long chain acyl-CoA synthetase 9. long chain acyl-CoA synthetase 9. Encodes major plastidic long chain acyl-CoA synthetase with a slight substrate preference of oleic acid over any of the other fatty acids.","AT5G35660",null,2085.4,5.0344,0.34414,14.629,1.83E-48,{"v":3.01e-46,"d":"3.01E-46"},"Glycine-rich protein family.","AT1G77450","NAC032",1011.5,2.0003,0.13586,14.724,{"v":4.54e-49,"d":"4.54E-49"},{"v":7.24e-47,"d":"7.24E-47"},"full_name=NAC domain containing protein 32. NAC domain containing protein 32.","AT1G15330",null,1545.2,2.6229,0.14217,18.449,{"v":5.32e-76,"d":"5.32E-76"},{"v":8.19e-74,"d":"8.19E-74"},"Cystathionine beta-synthase (CBS) protein.","AT1G47540",null,3678.2,-1.3781,0.099722,-13.82,{"v":1.94e-43,"d":"1.94E-43"},{"v":2.91e-41,"d":"2.91E-41"},"Scorpion toxin-like knottin superfamily protein."]
["AT2G05100","LHCB2.1",805.66,-2.3676,0.14703,-16.103,{"v":2.44e-58,"d":"2.44E-58"},{"v":4.11e-56,"d":"4.11E-56"},"full_name=photosystem II light harvesting complex gene 2.1. photosystem II light harvesting complex protein 2.1. Lhcb2.1 protein encoding a subunit of the light harvesting complex II. Member of a gene family with high degree of sequence similarity. Initially LHCB2.3 was considered as a separate gene but appears to be an allele of LHCB2.1.","AT1G19540",null,705.94,2.5206,0.17282,14.585,{"v":3.49e-48,"d":"3.49E-48"},{"v":5.68e-46,"d":"5.68E-46"},"NmrA-like negative transcriptional regulator family protein.","AT1G03790","SOM",5149.8,1.7813,0.12114,14.704,{"v":6.09e-49,"d":"6.09E-49"},{"v":9.62e-47,"d":"9.62E-47"},"full_name=SOMNUS. Zinc finger C-x8-C-x5-C-x3-H type family protein. Encodes SOMNUS (SOM), a nucleus-localized CCCH-type zinc finger protein. SOM negatively regulates light-dependent seed germination downstream of PIL5 (AT2G20180).","AT3G02550","LBD41",398.55,-3.4525,0.18725,-18.438,{"v":6.45e-76,"d":"6.45E-76"},9.85E-74,"full_name=LOB domain-containing protein 41. LOB domain-containing protein 41.","AT5G63530","FP3",459.31,-2.1035,0.15251,-13.793,{"v":2.83e-43,"d":"2.83E-43"},{"v":4.21e-41,"d":"4.21E-41"},"full_name=farnesylated protein 3. farnesylated protein 3. Farnesylated protein that binds metals."]
["AT5G45690",null,13876,1.5357,0.095688,16.049,5.77E-58,{"v":9.61e-56,"d":"9.61E-56"},"histone acetyltransferase (DUF1264).","AT1G76470",null,190.86,-3.0602,0.21115,-14.493,{"v":1.34e-47,"d":"1.34E-47"},{"v":2.17e-45,"d":"2.17E-45"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT1G01720","ATAF1",3669.3,1.613,0.10987,14.681,{"v":8.54e-49,"d":"8.54E-49"},{"v":1.34e-46,"d":"1.34E-46"},"NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA.","AT2G41280","M10",19092,2.305,0.12511,18.424,{"v":8.5e-76,"d":"8.50E-76"},1.29E-73,"late embryogenesis abundant protein (M10) / LEA protein M10. Encodes a hydrophilic protein similar to Late Embryogenesis Activated (LEA) proteins expressed during embryogenesis, which are thought to be involved in the acquisition of dessication tolerance.","AT1G68570","NPF3.1",1785.3,-1.0729,0.077836,-13.784,3.18E-43,4.69E-41,"Major facilitator superfamily protein."]
["AT5G57550","XTH25",2012.2,2.5944,0.16337,15.88,{"v":8.72e-57,"d":"8.72E-57"},1.44E-54,"full_name=xyloglucan endotransglucosylase/hydrolase 25. xyloglucan endotransglucosylase/hydrolase 25. xyloglucan endotransglycosylase-related protein (XTR3)","AT2G47180","GolS1",246.12,2.8614,0.19756,14.484,{"v":1.54e-47,"d":"1.54E-47"},2.46E-45,"full_name=galactinol synthase 1. galactinol synthase 1. GolS1 is a galactinol synthase that catalyzes the formation of galactinol from UDP-galactose and myo-inositol. GolS1 transcript levels rise in response to methyl viologen, an oxidative damage-inducing agent. Plants over-expressing GolS1 have increased tolerance to salt, chilling, and high-light stress.","AT3G20210","DELTA-VPE",375.16,-2.2816,0.15545,-14.677,{"v":8.99e-49,"d":"8.99E-49"},1.39E-46,"full_name=delta vacuolar processing enzyme. delta vacuolar processing enzyme. Encodes a vacuolar processing enzyme with caspase-1-like activity that is specifically expressed in inner integument of developing seeds. Mutants display abnormal seed coat development. It is speculated to be involved in cell death of limited cell layers, the purpose of which is to form a seed coat.","AT3G08860","PYD4",459.92,-3.8921,0.21128,-18.422,{"v":8.83e-76,"d":"8.83E-76"},1.32E-73,"full_name=PYRIMIDINE 4. PYRIMIDINE 4. Encodes a protein that is predicted to have beta-alanine aminotransferase activity.","AT3G55440","TPI",749.68,1.4196,0.1035,13.715,{"v":8.25e-43,"d":"8.25E-43"},{"v":1.2E-40,"d":"1.20E-40"},"full_name=triosephosphate isomerase. triosephosphate isomerase. Encodes triosephosphate isomerase."]
["AT3G48200",null,180.92,-5.6835,0.3585,-15.853,1.33E-56,{"v":2.18e-54,"d":"2.18E-54"},"transmembrane protein.","AT1G60680",null,328.17,2.1431,0.14827,14.454,{"v":2.35e-47,"d":"2.35E-47"},{"v":3.72e-45,"d":"3.72E-45"},"NAD(P)-linked oxidoreductase superfamily protein.","AT2G36780",null,220.33,4.576,0.31185,14.674,{"v":9.47e-49,"d":"9.47E-49"},1.45E-46,"UDP-Glycosyltransferase superfamily protein.","AT5G62680","GTR2",299.53,-3.6487,0.19823,-18.407,{"v":1.16e-75,"d":"1.16E-75"},{"v":1.72e-73,"d":"1.72E-73"},"full_name=GLUCOSINOLATE TRANSPORTER-2. Major facilitator superfamily protein. Encodes a high-affinity, proton-dependent glucosinolate-specific transporter that is crucial for the transport of both methionine- and tryptophan-derived glucosinolates to seeds.","AT1G05510","OBAP1A",46607,-1.0173,0.07441,-13.672,{"v":1.5e-42,"d":"1.50E-42"},2.17E-40,"naphthalene 1,2-dioxygenase subunit alpha (DUF1264). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds."]
["AT1G28590",null,196.49,-3.6933,0.23302,-15.85,{"v":1.4E-56,"d":"1.40E-56"},{"v":2.28e-54,"d":"2.28E-54"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT4G27530",null,300.39,2.5764,0.17871,14.417,{"v":4.06e-47,"d":"4.06E-47"},6.38E-45,"hypothetical protein.","AT1G12130","FMOGS-OX6",199.36,3.1147,0.21248,14.659,{"v":1.18e-48,"d":"1.18E-48"},{"v":1.79e-46,"d":"1.79E-46"},"Flavin-binding monooxygenase family protein.","AT1G21750","PDIL1-1",441.74,-2.4915,0.1355,-18.388,{"v":1.64e-75,"d":"1.64E-75"},{"v":2.41e-73,"d":"2.41E-73"},"full_name=PDI-like 1-1. PDI-like 1-1. Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.","AT4G33980","COR28",1748.6,1.1748,0.086137,13.639,{"v":2.34e-42,"d":"2.34E-42"},{"v":3.35e-40,"d":"3.35E-40"},"hypothetical protein."]
["AT5G18450",null,285.76,2.6575,0.16887,15.737,{"v":8.42e-56,"d":"8.42E-56"},1.35E-53,"Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.","AT3G47340","ASN1",135.35,4.2732,0.29708,14.384,{"v":6.54e-47,"d":"6.54E-47"},{"v":1.02e-44,"d":"1.02E-44"},"full_name=glutamine-dependent asparagine synthase 1. glutamine-dependent asparagine synthase 1. encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.","AT3G52370","FLA15",421.55,-2.104,0.14463,-14.547,{"v":6.06e-48,"d":"6.06E-48"},{"v":9.14e-46,"d":"9.14E-46"},"full_name=FASCICLIN-like arabinogalactan protein 15 precursor. FASCICLIN-like arabinogalactan protein 15 precursor.","AT5G04380",null,249.13,-3.2435,0.17658,-18.368,2.37E-75,{"v":3.45e-73,"d":"3.45E-73"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT4G20830","ATBBE19",794.13,1.2248,0.089989,13.61,3.49E-42,4.96E-40,"FAD-binding Berberine family protein."]
["AT5G58860","CYP86A1",425.83,-2.9708,0.18953,-15.675,{"v":2.24e-55,"d":"2.24E-55"},{"v":3.57e-53,"d":"3.57E-53"},"full_name=cytochrome P450, family 86, subfamily A, polypeptide 1. cytochrome P450, family 86, subfamily A, polypeptide 1. Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed significantly only in root tissue.","AT4G04810","MSRB4",339.33,3.0027,0.20915,14.357,{"v":9.69e-47,"d":"9.69E-47"},{"v":1.49e-44,"d":"1.49E-44"},"full_name=methionine sulfoxide reductase B4. methionine sulfoxide reductase B4.","AT5G18130",null,795.96,2.2843,0.1571,14.54,{"v":6.73e-48,"d":"6.73E-48"},1.01E-45,"transmembrane protein.","AT4G19380",null,240.62,-3.2167,0.17521,-18.359,2.81E-75,4.06E-73,"Long-chain fatty alcohol dehydrogenase family protein.","AT1G75800",null,823.76,1.7068,0.12558,13.592,{"v":4.5e-42,"d":"4.50E-42"},{"v":6.33e-40,"d":"6.33E-40"},"Pathogenesis-related thaumatin superfamily protein."]
["AT4G12800","PSAL",2256.7,-1.7946,0.11454,-15.668,{"v":2.49e-55,"d":"2.49E-55"},{"v":3.93e-53,"d":"3.93E-53"},"full_name=photosystem I subunit l. photosystem I subunit l. Encodes subunit L of photosystem I reaction center.","AT3G53230","AtCDC48B",1522.3,1.5013,0.10469,14.34,1.22E-46,{"v":1.87e-44,"d":"1.87E-44"},"full_name=cell division cycle 48B. ATPase, AAA-type, CDC48 protein.","AT1G54870",null,56045,1.3992,0.096898,14.44,{"v":2.9E-47,"d":"2.90E-47"},{"v":4.29e-45,"d":"4.29E-45"},"NAD(P)-binding Rossmann-fold superfamily protein. ChlADR is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on saturated and alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. The N-terminal region of this protein directs GFP to the chloroplast where where ChlADR likely helps to maintain the photosynthetic process by detoxifying reactive carbonyls formed during lipid peroxidation. In addition, this enzyme can also reduce cis-3-hexenal, a major plant volatile compound that contributes to green leaf odor, as well as methylglyoxal in vitro.","AT4G39090","RD19",619.67,-4.0199,0.21941,-18.321,{"v":5.61e-75,"d":"5.61E-75"},{"v":8.04e-73,"d":"8.04E-73"},"full_name=RESPONSIVE TO DEHYDRATION 19. Papain family cysteine protease. Similar to cysteine proteinases, induced by desiccation but not abscisic acid. Required for RRS1-R mediated resistance against Ralstonia solanacearum. Interacts with the R. solanacearum type III effector PopP2. RD19 associates with PopP2 to form a nuclear complex that is required for activation of the RRS1-R%E2%80%93mediated resistance response.","AT1G70680",null,199.54,-4.4136,0.32746,-13.478,{"v":2.1e-41,"d":"2.10E-41"},{"v":2.93e-39,"d":"2.93E-39"},"Caleosin-related family protein."]
["AT1G72100",null,1385.5,1.8254,0.11738,15.55,{"v":1.58e-54,"d":"1.58E-54"},2.47E-52,"late embryogenesis abundant domain-containing protein / LEA domain-containing protein.","AT3G11050","FER2",5802.6,1.5335,0.10764,14.247,{"v":4.7e-46,"d":"4.70E-46"},{"v":7.13e-44,"d":"7.13E-44"},"full_name=ferritin 2. ferritin 2.","AT5G15530","BCCP2",184.83,-3.3757,0.23409,-14.42,{"v":3.86e-47,"d":"3.86E-47"},{"v":5.67e-45,"d":"5.67E-45"},"full_name=biotin carboxyl carrier protein 2. biotin carboxyl carrier protein 2. biotin carboxyl carrier protein isoform 2 (BCCP2) mRNA,","AT1G23200","HMS",368.52,-7.3654,0.4029,-18.281,1.17E-74,{"v":1.66e-72,"d":"1.66E-72"},"Plant invertase/pectin methylesterase inhibitor superfamily. Encodes a pectin methyl esterase involved in embryo development.","AT5G59170",null,11091,-1.0483,0.077797,-13.474,{"v":2.22e-41,"d":"2.22E-41"},{"v":3.07e-39,"d":"3.07E-39"},"Proline-rich extensin-like family protein."]
["AT3G23810","SAHH2",564.27,-2.1096,0.13691,-15.409,{"v":1.43e-53,"d":"1.43E-53"},{"v":2.21e-51,"d":"2.21E-51"},"full_name=S-adenosyl-l-homocysteine (SAH) hydrolase 2. S-adenosyl-l-homocysteine (SAH) hydrolase 2.","AT3G50970","LTI30",789.49,1.7036,0.11992,14.206,{"v":8.45e-46,"d":"8.45E-46"},{"v":1.27e-43,"d":"1.27E-43"},"full_name=LOW TEMPERATURE-INDUCED 30. dehydrin family protein. Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. LTI29 and LTI30 double overexpressors confer freeze tolerance. Located in membranes. mRNA upregulated by water deprivation and abscisic acid.","AT5G03860","MLS",5465.8,1.806,0.12531,14.412,{"v":4.34e-47,"d":"4.34E-47"},{"v":6.33e-45,"d":"6.33E-45"},"full_name=malate synthase. malate synthase. Encodes a protein with malate synthase activity.","AT4G10250","ATHSP22.0",423.69,5.4322,0.29721,18.277,1.25E-74,1.76E-72,"HSP20-like chaperones superfamily protein. Columbia endomembrane-localized small heat shock protein","AT1G70985",null,356.67,-1.9391,0.14413,-13.454,2.94E-41,{"v":4.03e-39,"d":"4.03E-39"},"hydroxyproline-rich glycoprotein family protein."]
["AT5G19410","ABCG23",419.64,-2.1202,0.1376,-15.408,{"v":1.44e-53,"d":"1.44E-53"},{"v":2.21e-51,"d":"2.21E-51"},"full_name=ATP-binding cassette G23. ABC-2 type transporter family protein.","AT1G50110","BCAT6",468.99,-1.9413,0.13695,-14.175,{"v":1.3e-45,"d":"1.30E-45"},{"v":1.94e-43,"d":"1.94E-43"},"D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein.","AT2G30140","UGT87A2",256.77,2.5146,0.1746,14.403,{"v":4.98e-47,"d":"4.98E-47"},{"v":7.19e-45,"d":"7.19E-45"},"full_name=UDP-glucosyl transferase 87A2. UDP-Glycosyltransferase superfamily protein. Encodes a putative glycosyltransferase. Regulates flowering time via FLOWERING LOCUS C.","AT1G69410","ELF5A-3",2449,-1.6042,0.088195,-18.189,{"v":6.34e-74,"d":"6.34E-74"},{"v":8.85e-72,"d":"8.85E-72"},"full_name=eukaryotic elongation factor 5A-3. eukaryotic elongation factor 5A-3. Encodes eIF5A-2, a putative eukaryotic translation initiation factor. There are three eIF5A coding genes in Arabidopsis: eIF5A-1/At1g13950, eIF5A-2/At1g26630 and eIF5A-3/At1g69410.","AT4G32650","KAT3",484.47,1.5779,0.11744,13.436,3.71E-41,{"v":5.05e-39,"d":"5.05E-39"},"full_name=potassium channel in Arabidopsis thaliana 3. potassium channel protein. Encodes KAT3, a member of the Shaker family of voltage-gated potassium channel subunits. Does not form functional potassium channel on its own. Involved in down-regulating AKT1 and KAT1 channel activity by forming heteromers with AKT1 or KAT1. The Shaker family K+ ion channels include five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inwardly rectifying conductance): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500)."]
["AT5G08250",null,284,-2.4339,0.158,-15.405,{"v":1.52e-53,"d":"1.52E-53"},{"v":2.32e-51,"d":"2.32E-51"},"Cytochrome P450 superfamily protein.","AT2G21160",null,1405.5,-1.3393,0.094691,-14.144,{"v":2.03e-45,"d":"2.03E-45"},{"v":3E-43,"d":"3.00E-43"},"Translocon-associated protein (TRAP), alpha subunit.","AT3G56880",null,1372.4,1.5003,0.10451,14.356,{"v":9.83e-47,"d":"9.83E-47"},{"v":1.41e-44,"d":"1.41E-44"},"VQ motif-containing protein.","AT2G22990","SNG1",473.6,-2.7262,0.15035,-18.132,1.77E-73,{"v":2.45e-71,"d":"2.45E-71"},"full_name=sinapoylglucose 1. sinapoylglucose 1. sinapoylglucose:malate sinapoyltransferase. Catalyzes the formation of sinapoylmalate from sinapoylglucose. Mutants accumulate excess sinapoylglucose.","AT3G12580","HSP70",13399,-1.0245,0.076537,-13.386,{"v":7.33e-41,"d":"7.33E-41"},{"v":9.9e-39,"d":"9.90E-39"},"full_name=heat shock protein 70. heat shock protein 70."]
["AT5G62490","HVA22B",1735.9,2.6084,0.16957,15.382,2.15E-53,{"v":3.24e-51,"d":"3.24E-51"},"full_name=HVA22 homologue B. HVA22 homologue B. Part of the AtHVA22 family. Protein expression is ABA- and stress-inducible.","AT4G19020","CMT2",398.63,-1.9238,0.13626,-14.118,{"v":2.94e-45,"d":"2.94E-45"},{"v":4.31e-43,"d":"4.31E-43"},"full_name=chromomethylase 2. chromomethylase 2. Encodes a plant DNA methyltransferase that methylates mainly cytosines in CHH (H = any base but G) contexts. It is involved in heat tolerance.","AT1G46768","RAP2.1",185.49,3.0225,0.21062,14.351,{"v":1.05e-46,"d":"1.05E-46"},{"v":1.49e-44,"d":"1.49E-44"},"full_name=related to AP2 1. related to AP2 1. encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.1). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.9 and RAP2.10.","AT5G17700",null,428.39,-2.4669,0.13631,-18.097,{"v":3.34e-73,"d":"3.34E-73"},4.58E-71,"MATE efflux family protein.","AT1G48130","PER1",41748,-0.88825,0.066386,-13.38,{"v":7.9e-41,"d":"7.90E-41"},1.06E-38,"full_name=1-cysteine peroxiredoxin 1. 1-cysteine peroxiredoxin 1. encodes a protein similar to the 1-cysteine (1-Cys) peroxiredoxin family of antioxidants. Expression is limited to seed (aleurone and embryo) and is not induced by ABA or drought."]
["AT5G55750",null,412.01,2.211,0.14376,15.38,{"v":2.22e-53,"d":"2.22E-53"},{"v":3.33e-51,"d":"3.33E-51"},"hydroxyproline-rich glycoprotein family protein.","AT1G53520","FAP3",191.45,-2.8556,0.20234,-14.113,{"v":3.16e-45,"d":"3.16E-45"},4.59E-43,"full_name=fatty-acid-binding protein 3. Chalcone-flavanone isomerase family protein. Encodes a plastid stroma localized fatty acid binding protein involved in fatty acid metabolism.","AT5G52920","PKP-BETA1",1465.1,-2.1177,0.14763,-14.345,1.15E-46,1.61E-44,"full_name=plastidic pyruvate kinase beta subunit 1. plastidic pyruvate kinase beta subunit 1. encodes a dominant chloroplast pyruvate kinase beta subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mutant plant has wrinkled seeds, with a 50-70% reduction in seed fatty acid content.","AT4G24275",null,254.45,-4.553,0.25185,-18.078,4.75E-73,{"v":6.46e-71,"d":"6.46E-71"},"hypothetical protein. Identified as a screen for stress-responsive genes.","AT4G21320","HSA32",812.58,-1.244,0.093269,-13.337,{"v":1.4E-40,"d":"1.40E-40"},1.86E-38,"full_name=HEAT-STRESS-ASSOCIATED 32. Aldolase-type TIM barrel family protein. Encodes heat-stress-associated 32-kD protein. Up-regulated by heat shock. Thermotolerance in a knockout mutant was compromised following a long recovery period (> 24 h) after acclimation heat shock treatment."]
["AT5G37690",null,1001.1,-3.3206,0.21691,-15.309,{"v":6.67e-53,"d":"6.67E-53"},{"v":9.92e-51,"d":"9.92E-51"},"SGNH hydrolase-type esterase superfamily protein.","AT2G43820","UGT74F2",181.54,-2.7853,0.19777,-14.083,{"v":4.81e-45,"d":"4.81E-45"},{"v":6.93e-43,"d":"6.93E-43"},"full_name=UDP-glucosyltransferase 74F2. UDP-glucosyltransferase 74F2. Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.","AT5G55750",null,2636.6,1.5775,0.11004,14.336,{"v":1.3e-46,"d":"1.30E-46"},{"v":1.82e-44,"d":"1.82E-44"},"hydroxyproline-rich glycoprotein family protein.","AT5G54160","OMT1",256.31,-5.4292,0.30046,-18.07,5.51E-73,{"v":7.44e-71,"d":"7.44E-71"},"full_name=O-methyltransferase 1. O-methyltransferase 1. A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3?-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3?-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase","AT3G09390","MT2A",4248.1,-4.3979,0.33117,-13.28,3.02E-40,3.98E-38,"full_name=metallothionein 2A. metallothionein 2A. metallothionein, binds to and detoxifies excess copper and other metals, limiting oxidative damage"]
["AT1G74470",null,2383.2,-1.5605,0.10231,-15.253,1.57E-52,{"v":2.32e-50,"d":"2.32E-50"},"Pyridine nucleotide-disulfide oxidoreductase family protein. Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate.","AT2G33070","NSP2",7980,1.8111,0.12862,14.081,{"v":4.96e-45,"d":"4.96E-45"},{"v":7.09e-43,"d":"7.09E-43"},"full_name=nitrile specifier protein 2. nitrile specifier protein 2. Encodes a nitrile-specifier protein NSP2. NSP2 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation.","AT5G27360","SFP2",356.71,-2.8279,0.19783,-14.294,2.37E-46,{"v":3.29e-44,"d":"3.29E-44"},"Major facilitator superfamily protein. Encodes a sugar-porter family protein that unlike the closely related gene, SFP1, is not induced during leaf senescence.","AT1G68570","NPF3.1",1086.2,2.978,0.16514,18.034,{"v":1.06e-72,"d":"1.06E-72"},1.42E-70,"Major facilitator superfamily protein.","AT1G62710","BETA-VPE",17506,-0.84651,0.063755,-13.278,{"v":3.12e-40,"d":"3.12E-40"},{"v":4.07e-38,"d":"4.07E-38"},"full_name=beta vacuolar processing enzyme. beta vacuolar processing enzyme. Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins."]
["AT1G70840","MLP31",274.27,3.4761,0.22805,15.243,1.83E-52,{"v":2.68e-50,"d":"2.68E-50"},"full_name=MLP-like protein 31. MLP-like protein 31.","AT4G36700",null,24515,-1.2948,0.091955,-14.08,{"v":5.02e-45,"d":"5.02E-45"},7.11E-43,"RmlC-like cupins superfamily protein.","AT2G44470","BGLU29",580.79,-3.437,0.24139,-14.239,{"v":5.28e-46,"d":"5.28E-46"},{"v":7.26e-44,"d":"7.26E-44"},"full_name=beta glucosidase 29. beta glucosidase 29.","AT3G07390","AIR12",226.79,-3.3126,0.18423,-17.981,{"v":2.76e-72,"d":"2.76E-72"},{"v":3.66e-70,"d":"3.66E-70"},"full_name=Auxin-Induced in Root cultures 12. auxin-induced in root cultures-like protein. isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular.","AT1G04410","c-NAD-MDH1",911.33,1.3086,0.098672,13.262,{"v":3.85e-40,"d":"3.85E-40"},{"v":4.99e-38,"d":"4.99E-38"},"full_name=cytosolic-NAD-dependent malate dehydrogenase 1. Lactate/malate dehydrogenase family protein. predicted to encode a cytosolic malate dehydrogenase."]
["AT4G18680",null,253.95,2.6627,0.17469,15.242,{"v":1.85e-52,"d":"1.85E-52"},{"v":2.68e-50,"d":"2.68E-50"},"delay of germination protein.","AT1G19330","AFR2",188.41,-2.6148,0.18713,-13.973,2.27E-44,{"v":3.2e-42,"d":"3.20E-42"},"histone deacetylase complex subunit.","AT3G05260",null,7196.9,1.4547,0.10223,14.229,6.04E-46,{"v":8.23e-44,"d":"8.23E-44"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT1G19530",null,1276.6,3.0036,0.16727,17.957,{"v":4.27e-72,"d":"4.27E-72"},{"v":5.62e-70,"d":"5.62E-70"},"DNA polymerase epsilon catalytic subunit A.","AT3G08580","AAC1",1304.3,1.1727,0.088676,13.224,{"v":6.37e-40,"d":"6.37E-40"},{"v":8.18e-38,"d":"8.18E-38"},"full_name=ADP/ATP carrier 1. ADP/ATP carrier 1. mitochondrial ADP/ATP carrier"]
["AT2G02120","PDF2.1",15260,1.5761,0.10398,15.157,{"v":6.79e-52,"d":"6.79E-52"},{"v":9.77e-50,"d":"9.77E-50"},"Scorpion toxin-like knottin superfamily protein. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","AT5G64260","EXL2",1781.9,1.3477,0.096643,13.945,{"v":3.36e-44,"d":"3.36E-44"},{"v":4.68e-42,"d":"4.68E-42"},"full_name=EXORDIUM like 2. EXORDIUM like 2.","AT1G62420",null,217.38,2.911,0.20573,14.15,{"v":1.87e-45,"d":"1.87E-45"},2.53E-43,"DUF506 family protein (DUF506).","AT4G19410","PAE7",401.08,-2.56,0.14287,-17.919,{"v":8.38e-72,"d":"8.38E-72"},1.09E-69,"Pectinacetylesterase family protein.","AT4G35090","CAT2",10405,1.2142,0.092166,13.174,1.23E-39,1.57E-37,"full_name=catalase 2. catalase 2. Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2)."]
["AT5G64040","PSAN",510.31,-2.023,0.13355,-15.148,{"v":7.84e-52,"d":"7.84E-52"},{"v":1.12e-49,"d":"1.12E-49"},"photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN). Encodes the only subunit of photosystem I located entirely in the thylakoid lumen. May be involved in the interaction between plastocyanin and the photosystem I complex. Phosphorylation of this protein is dependent on calcium.","AT1G03130","PSAD-2",163.67,-3.0838,0.22126,-13.938,{"v":3.74e-44,"d":"3.74E-44"},{"v":5.17e-42,"d":"5.17E-42"},"full_name=photosystem I subunit D-2. photosystem I subunit D-2. Encodes a protein predicted by sequence similarity with spinach PsaD to be photosystem I reaction center subunit II (PsaD2)","AT1G71695",null,1646.9,-1.9162,0.13558,-14.134,{"v":2.35e-45,"d":"2.35E-45"},{"v":3.15e-43,"d":"3.15E-43"},"Peroxidase superfamily protein.","AT4G14040","SBP2",325.47,-2.6152,0.14623,-17.885,1.55E-71,2.01E-69,"full_name=selenium-binding protein 2. selenium-binding protein 2.","AT2G15010",null,9058.7,-1.095,0.083733,-13.077,{"v":4.47e-39,"d":"4.47E-39"},{"v":5.65e-37,"d":"5.65E-37"},"Plant thionin. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660."]
["AT3G60730",null,7468.1,1.4418,0.095217,15.142,{"v":8.59e-52,"d":"8.59E-52"},{"v":1.22e-49,"d":"1.22E-49"},"Plant invertase/pectin methylesterase inhibitor superfamily.","AT4G35160","ASMT",1047.8,1.995,0.14321,13.931,4.12E-44,{"v":5.66e-42,"d":"5.66E-42"},"O-methyltransferase family protein.","AT4G14980",null,191.94,-4.094,0.29111,-14.064,{"v":6.35e-45,"d":"6.35E-45"},{"v":8.45e-43,"d":"8.45E-43"},"Cysteine/Histidine-rich C1 domain family protein.","AT3G44880","ACD1",1744.4,-2.5733,0.14425,-17.839,{"v":3.5e-71,"d":"3.50E-71"},{"v":4.5e-69,"d":"4.50E-69"},"full_name=ACCELERATED CELL DEATH 1. Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein. Encodes a pheide a oxygenase (PAO). Accelerated cell death (acd1) mutants show rapid, spreading necrotic responses to both virulent and avirulent Pseudomonas syringae pv. maculicola or pv. tomato pathogens and to ethylene.","AT1G61340","FBS1",626.66,1.7814,0.13635,13.065,{"v":5.19e-39,"d":"5.19E-39"},{"v":6.51e-37,"d":"6.51E-37"},"full_name=F-box stress induced 1. F-box family protein. Encodes a F-box protein induced by various biotic or abiotic stress."]
["AT1G07645","DSI-1VOC",680.31,2.397,0.15936,15.042,{"v":3.91e-51,"d":"3.91E-51"},{"v":5.5e-49,"d":"5.50E-49"},"full_name=dessication-induced 1VOC superfamily protein. dessication-induced 1VOC superfamily protein.","AT4G23850","LACS4",1226.1,-1.3276,0.095511,-13.9,{"v":6.32e-44,"d":"6.32E-44"},{"v":8.6e-42,"d":"8.60E-42"},"full_name=long-chain acyl-CoA synthetase 4. AMP-dependent synthetase and ligase family protein.","AT1G64390","GH9C2",756,-2.4075,0.17124,-14.059,{"v":6.75e-45,"d":"6.75E-45"},{"v":8.91e-43,"d":"8.91E-43"},"full_name=glycosyl hydrolase 9C2. glycosyl hydrolase 9C2.","AT5G07680","NAC080",452.78,-4.1957,0.23608,-17.772,{"v":1.16e-70,"d":"1.16E-70"},{"v":1.48e-68,"d":"1.48E-68"},"full_name=NAC domain containing protein 80. NAC domain containing protein 80.","AT2G40000","HSPRO2",613.43,2.211,0.16925,13.063,{"v":5.35e-39,"d":"5.35E-39"},{"v":6.65e-37,"d":"6.65E-37"},"full_name=ortholog of sugar beet HS1 PRO-1 2. ortholog of sugar beet HS1 PRO-1 2."]
["AT1G79040","PSBR",3480.1,-2.1584,0.14355,-15.036,{"v":4.25e-51,"d":"4.25E-51"},{"v":5.92e-49,"d":"5.92E-49"},"full_name=photosystem II subunit R. photosystem II subunit R. Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ.","AT5G40610","GPDHp",1323.3,-1.2894,0.09333,-13.815,{"v":2.07e-43,"d":"2.07E-43"},{"v":2.79e-41,"d":"2.79E-41"},"full_name=Glycerol-3-phosphate dehydrogenase plastidic. NAD-dependent glycerol-3-phosphate dehydrogenase family protein.","AT5G01530","LHCB4.1",414.47,2.0159,0.14346,14.052,{"v":7.47e-45,"d":"7.47E-45"},{"v":9.79e-43,"d":"9.79E-43"},"full_name=light harvesting complex photosystem II. light harvesting complex photosystem II.","AT1G62510",null,2144.9,3.911,0.2205,17.737,{"v":2.17e-70,"d":"2.17E-70"},{"v":2.75e-68,"d":"2.75E-68"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT4G26150","CGA1",176.54,3.3813,0.25894,13.059,{"v":5.67e-39,"d":"5.67E-39"},{"v":7e-37,"d":"7.00E-37"},"full_name=cytokinin-responsive gata factor 1. cytokinin-responsive gata factor 1. Encodes a member of the GATA factor family of zinc finger transcription factors. Modulate chlorophyll biosynthesis and glutamate synthase (GLU1/Fd-GOGAT) expression."]
["AT1G01620","PIP1C",433.16,-1.9708,0.13153,-14.983,{"v":9.47e-51,"d":"9.47E-51"},{"v":1.31e-48,"d":"1.31E-48"},"full_name=plasma membrane intrinsic protein 1C. plasma membrane intrinsic protein 1C. a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development.","AT2G05990","MOD1",1364.4,-1.4118,0.10225,-13.808,{"v":2.29e-43,"d":"2.29E-43"},{"v":3.07e-41,"d":"3.07E-41"},"full_name=MOSAIC DEATH 1. NAD(P)-binding Rossmann-fold superfamily protein. Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves.","AT1G70840","MLP31",2544.8,2.0479,0.14577,14.048,{"v":7.87e-45,"d":"7.87E-45"},{"v":1.02e-42,"d":"1.02E-42"},"full_name=MLP-like protein 31. MLP-like protein 31.","AT1G14130","DAO1",325.62,-2.4702,0.13959,-17.696,4.48E-70,{"v":5.63e-68,"d":"5.63E-68"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT2G39980",null,673.71,1.5605,0.11955,13.053,{"v":6.15e-39,"d":"6.15E-39"},{"v":7.53e-37,"d":"7.53E-37"},"HXXXD-type acyl-transferase family protein."]
["AT5G16150","PGLCT",1391.1,-1.4448,0.097118,-14.877,{"v":4.66e-50,"d":"4.66E-50"},{"v":6.4e-48,"d":"6.40E-48"},"full_name=plastidic GLC translocator. plastidic GLC translocator. Encodes a putative plastidic glucose transporter.","AT4G01900","GLB1",982.9,-1.4572,0.10603,-13.743,{"v":5.59e-43,"d":"5.59E-43"},{"v":7.44e-41,"d":"7.44E-41"},"full_name=GLNB1 homolog. nitrogen regulatory P-II-like protein. encodes a PII protein that may function as part of a signal transduction network involved in perceiving the status of carbon and organic nitrogen. Forms a protein complex with N-acetylglutamate kinase and regulates the kinase activity by relieving the feedback inhibition of the kinase by arginine. Regulates acetyl-CoA carboxylase activity.","AT1G05340","ATHCYSTM1",840.25,1.7054,0.12141,14.047,{"v":8.03e-45,"d":"8.03E-45"},1.04E-42,"cysteine-rich TM module stress tolerance protein.","AT2G32440","KAO2",331.94,2.8159,0.1593,17.677,{"v":6.26e-70,"d":"6.26E-70"},{"v":7.8e-68,"d":"7.80E-68"},"full_name=ent-kaurenoic acid hydroxylase 2. ent-kaurenoic acid hydroxylase 2. ent-kaurenoic acid hydroxylase (KAO2)","AT1G20693","HMGB2",2618.6,-0.79423,0.06096,-13.029,{"v":8.4e-39,"d":"8.40E-39"},1.02E-36,"full_name=high mobility group B2. high mobility group B2. Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha."]
["AT4G28750","PSAE-1",415.65,-1.9698,0.13241,-14.876,{"v":4.71e-50,"d":"4.71E-50"},{"v":6.42e-48,"d":"6.42E-48"},"full_name=PSA E1 KNOCKOUT. Photosystem I reaction centre subunit IV / PsaE protein. mutant has Decreased effective quantum yield of photosystem II; Pale green plants; Reduced growth rate; Subunit E of Photosystem I","AT5G01670",null,9949.1,1.365,0.099449,13.726,{"v":7.1e-43,"d":"7.10E-43"},9.38E-41,"NAD(P)-linked oxidoreductase superfamily protein.","AT3G16950","LPD1",148.49,-3.8456,0.27416,-14.027,1.07E-44,1.36E-42,"full_name=lipoamide dehydrogenase 1. lipoamide dehydrogenase 1. encodes a plastid lipoamide dehydrogenase, subunit of the pyruvate dehydrogenase complex which provides acetyl-CoA for de novo fatty acid biosynthesis. The gene is highly expressed in developing seeds.","AT1G04580","AO4",286.48,-6.9009,0.39446,-17.495,{"v":1.57e-68,"d":"1.57E-68"},{"v":1.95e-66,"d":"1.95E-66"},"full_name=aldehyde oxidase 4. aldehyde oxidase 4. Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.","AT3G46670","UGT76E11",629.21,1.4151,0.10874,13.014,1.01E-38,{"v":1.22e-36,"d":"1.22E-36"},"full_name=UDP-glucosyl transferase 76E11. UDP-glucosyl transferase 76E11."]
["AT4G04640","ATPC1",668.21,-2.1195,0.14372,-14.747,{"v":3.21e-49,"d":"3.21E-49"},{"v":4.35e-47,"d":"4.35E-47"},"ATPase, F1 complex, gamma subunit protein. One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase.","AT3G48990","AAE3",833.65,1.4106,0.1028,13.722,{"v":7.49e-43,"d":"7.49E-43"},{"v":9.82e-41,"d":"9.82E-41"},"full_name=ACYL-ACTIVATING ENZYME 3. AMP-dependent synthetase and ligase family protein. Encodes an oxalyl-CoA synthetase and is required for oxalate degradation, for normal seed development, and for defense against an oxalate-producing fungal pathogen.","AT2G36270","ABI5",1981.3,1.8534,0.13261,13.977,{"v":2.17e-44,"d":"2.17E-44"},2.75E-42,"full_name=ABA INSENSITIVE 5. Basic-leucine zipper (bZIP) transcription factor family protein. Encodes a member of the basic leucine zipper transcription factor family, involved in ABA signalling during seed maturation and germination. The Arabidopsis abscisic acid (ABA)-insensitive abi5 mutants have pleiotropic defects in ABA response, including decreased sensitivity to ABA inhibition of germination and altered expression of some ABA-regulated genes. Comparison of seed and ABA-inducible vegetative gene expression in wild-type and abi5-1 plants indicates that ABI5 regulates a subset of late embryogenesis-abundant genes during both developmental stages.","AT2G03090","EXPA15",489.94,-7.3641,0.42104,-17.49,1.71E-68,{"v":2.1E-66,"d":"2.10E-66"},"full_name=expansin A15. expansin A15. member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","AT1G43710","EMB1075",971.91,1.2215,0.093992,12.996,{"v":1.29e-38,"d":"1.29E-38"},{"v":1.55e-36,"d":"1.55E-36"},"full_name=embryo defective 1075. Pyridoxal phosphate (PLP)-dependent transferases superfamily protein. Encodes a serine decarboxylase that is involved in ethanolamine metabolism and is crucial for plant growth."]
["AT3G08940","LHCB4.2",668.57,-1.8872,0.12824,-14.716,{"v":5.07e-49,"d":"5.07E-49"},{"v":6.8e-47,"d":"6.80E-47"},"full_name=light harvesting complex photosystem II. light harvesting complex photosystem II. Lhcb4.2 protein (Lhcb4.2, protein involved in the light harvesting complex of photosystem II","AT1G78370","GSTU20",183.08,-2.9629,0.21748,-13.624,{"v":2.89e-42,"d":"2.89E-42"},{"v":3.76e-40,"d":"3.76E-40"},"full_name=glutathione S-transferase TAU 20. glutathione S-transferase TAU 20. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","AT2G18340",null,439.5,2.8982,0.20945,13.837,1.52E-43,1.92E-41,"late embryogenesis abundant domain-containing protein / LEA domain-containing protein.","AT3G63040",null,4509.1,-2.861,0.1636,-17.488,1.77E-68,{"v":2.16e-66,"d":"2.16E-66"},"hypothetical protein.","AT2G23240","AtMT4b",13337,-0.92563,0.071407,-12.963,1.99E-38,{"v":2.36e-36,"d":"2.36E-36"},"full_name=Arabidopsis thaliana metallothionein 4b. Plant EC metallothionein-like protein, family 15. AtMT4b is a member of Type 4 metallothionein (MT) genes. It is involved in the early develoment of the embryo and in the accumulation of metal ions especially Zn in the seeds."]
["AT5G41040","RWP1",3716.7,-1.6348,0.11133,-14.684,{"v":8.2e-49,"d":"8.20E-49"},1.09E-46,"full_name=REDUCED LEVELS OF WALL-BOUND PHENOLICS 1. HXXXD-type acyl-transferase family protein. Encodes a feruloyl-CoA transferase required for suberin synthesis. Has feruloyl-CoA-dependent feruloyl transferase activity towards substrates with a primary alcohol.","AT1G74030","ENO1",560.62,-1.7782,0.13076,-13.599,{"v":4.04e-42,"d":"4.04E-42"},{"v":5.21e-40,"d":"5.21E-40"},"full_name=enolase 1. enolase 1. Encodes the plastid-localized phosphoenolpyruvate enolase. Mutant plants have abnormal trichomes.","AT1G23070",null,680.52,2.3864,0.17248,13.836,1.55E-43,{"v":1.94e-41,"d":"1.94E-41"},"organic solute transporter ostalpha protein (DUF300).","AT1G09380","UMAMIT25",481.34,-4.83,0.27648,-17.47,{"v":2.44e-68,"d":"2.44E-68"},{"v":2.95e-66,"d":"2.95E-66"},"full_name=Usually multiple acids move in and out Transporters 25. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT1G73010","PS2",113.87,-3.5532,0.27507,-12.917,{"v":3.6e-38,"d":"3.60E-38"},{"v":4.25e-36,"d":"4.25E-36"},"full_name=phosphate starvation-induced gene 2. inorganic pyrophosphatase 1. Encodes PPsPase1, a pyrophosphate-specific phosphatase catalyzing the specific cleavage of pyrophosphate (Km 38.8 uM) with an alkaline catalytic pH optimum. Expression is upregulated in the shoot of cax1/cax3 mutant."]
["AT1G20340","DRT112",996.88,-1.5565,0.10603,-14.68,{"v":8.7E-49,"d":"8.70E-49"},1.15E-46,"full_name=DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112. Cupredoxin superfamily protein. recombination and DNA-damage resistance protein (DRT112) One of two Arabidopsis plastocyanin genes. Predominant form, expressed 10x higher than PETE1. PETE2 is thought to be post-transcriptionally regulated via copper accumulation and is involved in copper homeostasis. Mutation of this gene does not have obvious effect on photosynthesis. In plsp1-1 mutant plastids, the nonmature form of the protein localizes in the membrane.","AT3G63410","APG1",830.36,-1.4957,0.11022,-13.57,6.04E-42,{"v":7.74e-40,"d":"7.74E-40"},"full_name=ALBINO OR PALE GREEN MUTANT 1. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis.","AT2G42000","AtMT4a",1859.1,3.0604,0.22161,13.81,{"v":2.22e-43,"d":"2.22E-43"},{"v":2.75e-41,"d":"2.75E-41"},"full_name=Arabidopsis thaliana metallothionein 4a. plant EC metallothionein family protein. AtMT4a is a member of Type 4 metallothionein (MT) genes. It is involved in the early develoment of the embryo and in the accumulation of metal ions especially Zn in the seeds.","AT3G50980","XERO1",7135.4,1.2592,0.0721,17.464,2.69E-68,{"v":3.24e-66,"d":"3.24E-66"},"full_name=dehydrin xero 1. dehydrin xero 1.","AT2G20560","DNAJ",3252.7,-0.76858,0.059783,-12.856,{"v":7.94e-38,"d":"7.94E-38"},{"v":9.29e-36,"d":"9.29E-36"},"DNAJ heat shock family protein."]
["AT1G30380","PSAK",955.09,-1.5511,0.10568,-14.678,8.93E-49,{"v":1.17e-46,"d":"1.17E-46"},"full_name=photosystem I subunit K. photosystem I subunit K. Encodes subunit K of photosystem I reaction center.","AT4G01050","TROL",490.48,-2.0836,0.15377,-13.55,{"v":7.89e-42,"d":"7.89E-42"},{"v":1e-39,"d":"1.00E-39"},"full_name=thylakoid rhodanese-like. thylakoid rhodanese-like protein. hydroxyproline-rich glycoprotein family protein, contains a rhodanese homology domain. Required for anchoring the FNR flavoenzyme to the thylakoid membranes and sustaining high efficiency photosynthetic linear electron flow.","AT4G21960","PRXR1",10664,-1.7989,0.13045,-13.79,{"v":2.92e-43,"d":"2.92E-43"},{"v":3.6e-41,"d":"3.60E-41"},"Peroxidase superfamily protein. Encodes AT4g21960 (AT4g21960/T8O5_170).","AT2G47120",null,218.28,-5.981,0.34329,-17.423,{"v":5.54e-68,"d":"5.54E-68"},{"v":6.61e-66,"d":"6.61E-66"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT5G38480","GRF3",573.16,1.5387,0.12013,12.809,1.47E-37,{"v":1.71e-35,"d":"1.71E-35"},"full_name=general regulatory factor 3. general regulatory factor 3. general regulatory factor, a 14-3-3 gene"]
["AT4G17215",null,353.55,-2.4075,0.16507,-14.585,{"v":3.5e-48,"d":"3.50E-48"},{"v":4.57e-46,"d":"4.57E-46"},"Pollen Ole e 1 allergen and extensin family protein.","AT1G03990",null,566.05,1.9312,0.14286,13.518,1.22E-41,{"v":1.55e-39,"d":"1.55E-39"},"Long-chain fatty alcohol dehydrogenase family protein.","AT5G54300",null,533.08,2.1933,0.15951,13.75,{"v":5.12e-43,"d":"5.12E-43"},{"v":6.27e-41,"d":"6.27E-41"},"cotton fiber-like protein (DUF761).","AT3G26440",null,331.73,-4.2775,0.24638,-17.361,{"v":1.63e-67,"d":"1.63E-67"},{"v":1.93e-65,"d":"1.93E-65"},"transmembrane protein, putative (DUF707).","AT5G06560","MYOB7",602.39,1.2917,0.10109,12.777,{"v":2.19e-37,"d":"2.19E-37"},2.53E-35,"myosin-binding protein (Protein of unknown function, DUF593)."]
["AT1G68170","UMAMIT23",1104.6,1.6873,0.11602,14.544,{"v":6.42e-48,"d":"6.42E-48"},{"v":8.31e-46,"d":"8.31E-46"},"full_name=Usually multiple acids move in and out Transporters 23. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT3G56940","CRD1",130.63,-3.5072,0.25961,-13.51,{"v":1.37e-41,"d":"1.37E-41"},{"v":1.72e-39,"d":"1.72E-39"},"full_name=COPPER RESPONSE DEFECT 1. dicarboxylate diiron protein, putative (Crd1). Encodes a putative ZIP protein with varying mRNA accumulation in leaves, stems and roots. Has a consensus carboxylate-bridged di-iron binding site.","AT3G57780",null,394.86,-2.3854,0.17374,-13.73,{"v":6.74e-43,"d":"6.74E-43"},8.19E-41,"nucleolar-like protein.","AT5G07000","ST2B",216.06,-3.5809,0.20655,-17.337,2.48E-67,{"v":2.91e-65,"d":"2.91E-65"},"full_name=sulfotransferase 2B. sulfotransferase 2B. Encodes a member of the sulfotransferase family of proteins. Although it has 85% amino acid identity with ST2A (At5g07010), this protein is not able to transfer a sulfate group to 11- or 12-hydroxyjasmonic acid in vitro. It may be able to act on structurally related jasmonates.","AT4G18160","KCO6",591.58,1.3498,0.10571,12.769,{"v":2.45e-37,"d":"2.45E-37"},{"v":2.8E-35,"d":"2.80E-35"},"full_name=Ca2+ activated outward rectifying K+ channel 6. Ca2+ activated outward rectifying K+ channel 6. Encodes AtTPK3 (KCO6), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins.AtTPK3 is targeted to the vacuolar membrane. May form homomeric ion channels in vivo."]
["AT5G62580",null,828.89,-1.5243,0.10484,-14.539,{"v":6.84e-48,"d":"6.84E-48"},{"v":8.8e-46,"d":"8.80E-46"},"ARM repeat superfamily protein.","AT1G50010","TUA2",540.08,-1.8852,0.13979,-13.486,{"v":1.89e-41,"d":"1.89E-41"},{"v":2.35e-39,"d":"2.35E-39"},"full_name=tubulin alpha-2 chain. tubulin alpha-2 chain. Encodes alpha-2,4 tubulin. TUA2 and TUA4 encode identical proteins.","AT2G38040","CAC3",756.05,-1.5012,0.10996,-13.652,{"v":1.97e-42,"d":"1.97E-42"},{"v":2.37e-40,"d":"2.37E-40"},"full_name=acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit. acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit. encodes the carboxyltransferase alpha subunit of acetyl-CoA carboxylase, involved in de novo fatty acid biosynthesis","AT3G22640","PAP85",168920,1.3664,0.078978,17.301,{"v":4.6e-67,"d":"4.60E-67"},{"v":5.37e-65,"d":"5.37E-65"},"cupin family protein.","AT2G43590",null,727.37,-1.4792,0.11609,-12.742,{"v":3.44e-37,"d":"3.44E-37"},3.91E-35,"Chitinase family protein."]
["AT3G04170",null,4719.4,2.4937,0.17194,14.503,{"v":1.16e-47,"d":"1.16E-47"},{"v":1.48e-45,"d":"1.48E-45"},"RmlC-like cupins superfamily protein.","AT1G02700",null,1235.7,1.4776,0.10981,13.456,{"v":2.85e-41,"d":"2.85E-41"},{"v":3.52e-39,"d":"3.52E-39"},"GATA transcription factor-like protein.","AT1G07985",null,4746.5,1.918,0.14053,13.648,2.08E-42,{"v":2.49e-40,"d":"2.49E-40"},"Expressed protein.","AT4G26590","OPT5",386.41,-2.3014,0.13308,-17.294,{"v":5.26e-67,"d":"5.26E-67"},{"v":6.1e-65,"d":"6.10E-65"},"full_name=oligopeptide transporter 5. oligopeptide transporter 5. oligopeptide transporter","AT1G64140",null,1459.6,0.96589,0.076089,12.694,6.37E-37,{"v":7.19e-35,"d":"7.19E-35"},"WRKY transcription factor."]
["AT2G23230",null,736.4,-2.5496,0.17598,-14.488,{"v":1.44e-47,"d":"1.44E-47"},{"v":1.83e-45,"d":"1.83E-45"},"Terpenoid cyclases/Protein prenyltransferases superfamily protein.","AT3G25500","AFH1",214.2,-2.3849,0.17726,-13.454,{"v":2.9e-41,"d":"2.90E-41"},{"v":3.56e-39,"d":"3.56E-39"},"full_name=formin homology 1. formin homology 1. Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event.","AT2G25340","VAMP712",354.26,2.0913,0.15338,13.635,{"v":2.49e-42,"d":"2.49E-42"},{"v":2.97e-40,"d":"2.97E-40"},"full_name=vesicle-associated membrane protein 712. vesicle-associated membrane protein 712. Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family.","AT5G07330",null,10223,1.3136,0.076073,17.268,{"v":8.18e-67,"d":"8.18E-67"},{"v":9.41e-65,"d":"9.41E-65"},"NFU1 iron-sulfur cluster protein.","AT1G77170",null,260.17,1.9377,0.1527,12.689,{"v":6.8e-37,"d":"6.80E-37"},{"v":7.62e-35,"d":"7.62E-35"},"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT3G26650","GAPA",1873.5,-1.5117,0.10443,-14.475,{"v":1.75e-47,"d":"1.75E-47"},{"v":2.2e-45,"d":"2.20E-45"},"full_name=glyceraldehyde 3-phosphate dehydrogenase A subunit. glyceraldehyde 3-phosphate dehydrogenase A subunit. Encodes one of the two subunits forming the photosynthetic glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and as such a constituent of the supramolecular complex with phosphoribulokinase (PRK) thought to be linked by a small peptide encoded by CP12-2. GapA-1 is coordinately expressed by light with PRK and CP12-2. The enzyme activity, tested in leaf protein extracts dropped significantly after external sucrose treatment for the photosynthetic GAPDH (NADPH-dependent) but not for the cytosolic GAPDH (NADH-dependent).","AT1G31330","PSAF",122.72,-4.8576,0.36125,-13.447,{"v":3.23e-41,"d":"3.23E-41"},{"v":3.93e-39,"d":"3.93E-39"},"full_name=photosystem I subunit F. photosystem I subunit F. Encodes subunit F of photosystem I.","AT3G02630","ACP",655.62,-3.2746,0.24128,-13.572,{"v":5.88e-42,"d":"5.88E-42"},6.95E-40,"Plant stearoyl-acyl-carrier-protein desaturase family protein.","AT5G08610","PDE340",428.46,2.3552,0.13643,17.263,8.99E-67,1.03E-64,"full_name=PIGMENT DEFECTIVE 340. P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT4G09000","GRF1",585.77,1.761,0.1388,12.687,{"v":7e-37,"d":"7.00E-37"},{"v":7.79e-35,"d":"7.79E-35"},"full_name=general regulatory factor 1. general regulatory factor 1. Encodes a 14-3-3 gene, designated GRF1 chi (for general regulatory factor1-G-box factor 14-3-3 homolog isoform chi). The major native forms of 14-3-3s are homo- and hetero-dimers, the biological functions of which are to interact physically with specific client proteins and thereby effect a change in the client. As a result, 14-3-3s are involved in a vast array of processes such as the response to stress, cell-cycle control, and apoptosis, serving as adapters, activators, and repressors. There are currently 133 full-length sequences available."]
["AT4G35100","PIP3",220.24,-3.5653,0.24739,-14.412,4.37E-47,{"v":5.46e-45,"d":"5.46E-45"},"full_name=plasma membrane intrinsic protein 3. plasma membrane intrinsic protein 3. a member of the plasma membrane intrinsic protein PIP. functions as aquaporin. Salt-stress-inducible MIP","AT4G04640","ATPC1",119.95,-4.6994,0.3497,-13.438,{"v":3.6e-41,"d":"3.60E-41"},{"v":4.36e-39,"d":"4.36E-39"},"ATPase, F1 complex, gamma subunit protein. One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase.","AT3G22740","HMT3",706.31,1.6857,0.12433,13.558,{"v":7.09e-42,"d":"7.09E-42"},{"v":8.32e-40,"d":"8.32E-40"},"full_name=homocysteine S-methyltransferase 3. homocysteine S-methyltransferase 3. homocysteine S-methyltransferase (HMT3)","AT5G24490",null,267.5,4.5754,0.26522,17.251,{"v":1.1e-66,"d":"1.10E-66"},{"v":1.25e-64,"d":"1.25E-64"},"30S ribosomal protein.","AT4G13010","CEQORH",2845.2,-0.91881,0.072543,-12.666,{"v":9.15e-37,"d":"9.15E-37"},1.01E-34,"Oxidoreductase, zinc-binding dehydrogenase family protein."]
["AT5G07390","RBOHA",133.03,-3.8148,0.26624,-14.329,1.45E-46,{"v":1.8e-44,"d":"1.80E-44"},"full_name=respiratory burst oxidase homolog A. respiratory burst oxidase homolog A.","AT1G42970","GAPB",776.48,-1.4908,0.11134,-13.39,{"v":6.91e-41,"d":"6.91E-41"},{"v":8.31e-39,"d":"8.31E-39"},"full_name=glyceraldehyde-3-phosphate dehydrogenase B subunit. glyceraldehyde-3-phosphate dehydrogenase B subunit. Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase that can use both NADH and NADPH to reduce 1,3-diphosphate glycerate. It forms A2B2 heterotetramers with GapA forms of the GADPH enzyme. These complexes are active in the light under reducing conditions, but show reduced NADPH-dependent activity in response to oxidized thioredoxins and increased NAD(H)/NADP(H) ratios due to the formation of inactive A8B8 hexadecamers.","AT5G60220","TET4",877.5,1.8384,0.13577,13.54,{"v":9.05e-42,"d":"9.05E-42"},1.05E-39,"full_name=tetraspanin4. tetraspanin4. Member of TETRASPANIN family","AT5G03610",null,235.32,-3.1823,0.18496,-17.205,{"v":2.43e-66,"d":"2.43E-66"},{"v":2.74e-64,"d":"2.74E-64"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT2G15880","LRX10",698.84,1.9282,0.15244,12.649,{"v":1.13e-36,"d":"1.13E-36"},1.24E-34,"Leucine-rich repeat (LRR) family protein."]
["AT4G15390",null,183.91,-2.9266,0.20442,-14.317,{"v":1.72e-46,"d":"1.72E-46"},{"v":2.12e-44,"d":"2.12E-44"},"HXXXD-type acyl-transferase family protein.","AT1G54580","ACP2",1460,-1.2935,0.096714,-13.375,{"v":8.47e-41,"d":"8.47E-41"},1.01E-38,"full_name=acyl carrier protein 2. acyl carrier protein 2. encodes an acyl carrier protein expressed in leaves, roots, and dry seeds. Gene expression is not regulated by light but downregulated by starvation and upregulated by increased level of exogenous sucrose.","AT4G24770","RBP31",345.24,2.1138,0.15648,13.508,{"v":1.4e-41,"d":"1.40E-41"},1.62E-39,"full_name=31-kDa RNA binding protein. 31-kDa RNA binding protein. Encodes a chloroplast RNA-binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Required for editing and stability of specific chloroplast mRNAs.","AT1G20620","CAT3",14286,1.6561,0.096576,17.148,{"v":6.48e-66,"d":"6.48E-66"},{"v":7.25e-64,"d":"7.25E-64"},"full_name=catalase 3. catalase 3. Catalase, catalyzes the breakdown of hydrogen peroxide (H2O2) into water and oxygen.","AT4G36850",null,602.75,1.6967,0.13421,12.642,1.24E-36,{"v":1.35e-34,"d":"1.35E-34"},"PQ-loop repeat family protein / transmembrane family protein."]
["AT2G03750",null,150.63,-3.3821,0.23712,-14.263,{"v":3.71e-46,"d":"3.71E-46"},{"v":4.54e-44,"d":"4.54E-44"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT1G15960","NRAMP6",976.13,1.7947,0.13477,13.317,1.83E-40,2.17E-38,"full_name=NRAMP metal ion transporter 6. NRAMP metal ion transporter 6. member of Nramp2 family","AT1G42970","GAPB",197.78,-2.8398,0.21087,-13.467,{"v":2.45e-41,"d":"2.45E-41"},{"v":2.82e-39,"d":"2.82E-39"},"full_name=glyceraldehyde-3-phosphate dehydrogenase B subunit. glyceraldehyde-3-phosphate dehydrogenase B subunit. Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase that can use both NADH and NADPH to reduce 1,3-diphosphate glycerate. It forms A2B2 heterotetramers with GapA forms of the GADPH enzyme. These complexes are active in the light under reducing conditions, but show reduced NADPH-dependent activity in response to oxidized thioredoxins and increased NAD(H)/NADP(H) ratios due to the formation of inactive A8B8 hexadecamers.","AT2G46960","CYP709B1",358.68,-7.653,0.44674,-17.131,{"v":8.76e-66,"d":"8.76E-66"},{"v":9.74e-64,"d":"9.74E-64"},"full_name=cytochrome P450, family 709, subfamily B, polypeptide 1. cytochrome P450, family 709, subfamily B, polypeptide 1. member of CYP709B","AT4G27450",null,2953.1,1.2794,0.1016,12.592,{"v":2.34e-36,"d":"2.34E-36"},2.53E-34,"aluminum induced protein with YGL and LRDR motifs."]
["AT5G23060","CaS",142.64,-3.7731,0.26556,-14.208,{"v":8.18e-46,"d":"8.18E-46"},{"v":9.94e-44,"d":"9.94E-44"},"full_name=calcium sensing receptor. calcium sensing receptor. Encodes a chloroplast-localized protein that modulates cytoplasmic Ca2+ concentration and is crucial for proper stomatal regulation in response to elevations of external Ca2+. Phosphorylation of this protein is dependent on calcium.","AT2G29630","THIC",442.17,-1.8372,0.13802,-13.311,{"v":1.99e-40,"d":"1.99E-40"},2.35E-38,"full_name=thiaminC. thiaminC. Encodes a protein involved in thiamine biosynthesis. The protein is an iron-sulfur cluster protein predicted to catalyze the conversion of 5-aminoimidazole ribonucleotide (AIR) to hydroxymethylpyrimidine phosphate (HMP-P). A severe reduction of THIC levels in plants decreases vitamin B1 (thiamin diphosphate (TPP)) levels and also leads to changes in the levels of numerous other metabolites since so many primary metabolic enzymes require a TPP co-factor. thiC mutants are chlorotic and arrest in their development at the cotyledon stage. A N-terminal targeting sequence directs the THIC protein to the chloroplast stroma. The THIC transcript is regulated by a TPP riboswitch in the 3' UTR. THIC transcripts are observed in seedlings 5 or more days after germination, and light promotes the expression of this gene.","AT1G01170",null,494.49,1.7809,0.13234,13.457,{"v":2.8e-41,"d":"2.80E-41"},{"v":3.2e-39,"d":"3.20E-39"},"ozone-responsive stress-like protein (DUF1138).","AT3G22490","ATRAB28",8787,1.7258,0.10112,17.067,{"v":2.63e-65,"d":"2.63E-65"},{"v":2.9e-63,"d":"2.90E-63"},"Seed maturation protein.","AT1G60680",null,3703.5,-0.83554,0.066374,-12.588,{"v":2.45e-36,"d":"2.45E-36"},{"v":2.63e-34,"d":"2.63E-34"},"NAD(P)-linked oxidoreductase superfamily protein."]
["AT1G26680",null,529.68,-2.6769,0.18846,-14.204,{"v":8.6e-46,"d":"8.60E-46"},{"v":1.04e-43,"d":"1.04E-43"},"transcriptional factor B3 family protein.","AT2G05790",null,2214.9,-1.4508,0.10922,-13.283,{"v":2.91e-40,"d":"2.91E-40"},{"v":3.41e-38,"d":"3.41E-38"},"O-Glycosyl hydrolases family 17 protein.","AT3G03770",null,784.95,-1.9854,0.14792,-13.422,{"v":4.47e-41,"d":"4.47E-41"},{"v":5.07e-39,"d":"5.07E-39"},"Leucine-rich repeat protein kinase family protein.","AT4G16190",null,324.25,-4.1962,0.24611,-17.05,{"v":3.48e-65,"d":"3.48E-65"},{"v":3.81e-63,"d":"3.81E-63"},"Papain family cysteine protease.","AT3G21720","ICL",34559,0.87188,0.069449,12.554,{"v":3.77e-36,"d":"3.77E-36"},{"v":4.02e-34,"d":"4.02E-34"},"full_name=isocitrate lyase. isocitrate lyase. Encodes a glyoxylate cycle enzyme isocitrate lyase (ICL)."]
["AT1G54780","TLP18.3",271.31,-2.2426,0.15791,-14.202,{"v":8.91e-46,"d":"8.91E-46"},{"v":1.07e-43,"d":"1.07E-43"},"full_name=thylakoid lumen protein 18.3. thylakoid lumen 18.3 kDa protein. Encodes a thylakoid lumen protein regulating photosystem II repair cycle. Has acid phosphatase activity.","AT3G51810","EM1",8177.7,1.6927,0.12769,13.256,{"v":4.16e-40,"d":"4.16E-40"},4.83E-38,"full_name=LATE EMBRYOGENESIS ABUNDANT 1. Stress induced protein. Encodes a ABA-inducible protein that accumulates during seed maturation, in parallel with its corresponding mRNA but with a 3 d delay. During germination, AtEm1 protein undergoes two successive cleavages before being degraded. Both proteins are more stable than the corresponding mRNA. The gene can be activated by the basic leucine zipper transcription factor ABI5. Expressed predominantly in provascular tissues with the strongest expression in the root tip.","AT1G54580","ACP2",424.92,-2.4736,0.18464,-13.396,{"v":6.34e-41,"d":"6.34E-41"},{"v":7.14e-39,"d":"7.14E-39"},"full_name=acyl carrier protein 2. acyl carrier protein 2. encodes an acyl carrier protein expressed in leaves, roots, and dry seeds. Gene expression is not regulated by light but downregulated by starvation and upregulated by increased level of exogenous sucrose.","AT1G56580","SVB",269.82,-4.3648,0.25656,-17.013,{"v":6.58e-65,"d":"6.58E-65"},7.17E-63,"full_name=SMALLER WITH VARIABLE BRANCHES. plant/protein (Protein of unknown function, DUF538). Encodes SMALLER WITH VARIABLE BRANCHES (SVB), a protein with a conserved domain of unknown function (DUF538). The trichomes of the SVB mutants are smaller and exhibit branches of variable length and number.","AT5G10550","GTE2",527.23,1.3379,0.10666,12.544,{"v":4.3e-36,"d":"4.30E-36"},{"v":4.57e-34,"d":"4.57E-34"},"full_name=global transcription factor group E2. global transcription factor group E2. This gene is predicted to encode a bromodomain-containing protein. A plant line expressing RNAi constructs targeted against GTE7 shows some resistance to agrobacterium-mediated root transformation."]
["AT3G61440","CYSC1",1220.5,-1.5203,0.10757,-14.134,{"v":2.35e-45,"d":"2.35E-45"},{"v":2.8e-43,"d":"2.80E-43"},"full_name=cysteine synthase C1. cysteine synthase C1. Encodes a cysteine synthase isomer CysC1. The isomer is however less effective in cysteine biosynthesis. It is involved in beta-cyanoalanine biosynthesis, an intermediate of cyanide detoxification pathway.","AT1G29920","CAB2",113.2,-4.8629,0.36744,-13.235,{"v":5.54e-40,"d":"5.54E-40"},{"v":6.39e-38,"d":"6.39E-38"},"full_name=chlorophyll A/B-binding protein 2. chlorophyll A/B-binding protein 2. Encodes lhcb1.1 a component of the LHCIIb light harvesting complex associated with photosystem II.","AT3G09350","Fes1A",623.44,2.3166,0.17315,13.379,{"v":8.04e-41,"d":"8.04E-41"},{"v":8.99e-39,"d":"8.99E-39"},"full_name=Fes1A. Fes1A. Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70. Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance. Does not have nucleotide exchange factor activity in vitro.","AT3G26165","CYP71B18",241.75,3.4504,0.20283,17.012,{"v":6.72e-65,"d":"6.72E-65"},{"v":7.26e-63,"d":"7.26E-63"},"full_name=cytochrome P450, family 71, subfamily B, polypeptide 18. pseudogene. putative cytochrome P450.","AT3G01420","DOX1",149.63,-4.7754,0.3813,-12.524,{"v":5.52e-36,"d":"5.52E-36"},5.82E-34,"Peroxidase superfamily protein. Encodes an alpha-dioxygenase involved in protection against oxidative stress and cell death. Induced in response to Salicylic acid and oxidative stress. Independent of NPR1 in induction by salicylic acid."]
["AT1G16770",null,700.02,1.9709,0.13976,14.102,{"v":3.69e-45,"d":"3.69E-45"},4.37E-43,"hypothetical protein.","AT1G64110","DAA1",119.31,4.0073,0.30297,13.227,{"v":6.14e-40,"d":"6.14E-40"},7.04E-38,"full_name=DUO1-activated ATPase 1. P-loop containing nucleoside triphosphate hydrolases superfamily protein. Target promoter of the male germline-specific transcription factor DUO1.","AT5G05170","CEV1",996,-1.4572,0.10899,-13.37,{"v":9.1e-41,"d":"9.10E-41"},1.01E-38,"full_name=CONSTITUTIVE EXPRESSION OF VSP 1. Cellulose synthase family protein. Encodes a cellulose synthase isomer. CESA3 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA3, along with CESA1 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. The xylem cells in primary root have reduced cell expansion and higher than normal lignification.","AT3G22500","ATECP31",18778,1.8961,0.11192,16.942,2.21E-64,{"v":2.37e-62,"d":"2.37E-62"},"full_name=LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP31. Seed maturation protein. late embryogenesis abundant (LEA) protein","AT1G67480",null,646.99,1.5786,0.1261,12.518,{"v":5.93e-36,"d":"5.93E-36"},{"v":6.21e-34,"d":"6.21E-34"},"Galactose oxidase/kelch repeat superfamily protein."]
["AT3G52790",null,227.43,-2.8692,0.20441,-14.037,9.26E-45,1.09E-42,"peptidoglycan-binding LysM domain-containing protein.","AT3G48580","XTH11",144.04,2.9746,0.22502,13.219,{"v":6.78e-40,"d":"6.78E-40"},{"v":7.73e-38,"d":"7.73E-38"},"full_name=xyloglucan endotransglucosylase/hydrolase 11. xyloglucan endotransglucosylase/hydrolase 11.","AT2G28420","GLYI8",2236.8,1.7245,0.12914,13.354,1.13E-40,{"v":1.24e-38,"d":"1.24E-38"},"full_name=glyoxylase I 8. Lactoylglutathione lyase / glyoxalase I family protein.","AT1G68380",null,263.18,-4.3539,0.25719,-16.929,2.76E-64,{"v":2.95e-62,"d":"2.95E-62"},"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein.","AT5G42950","EXA1",1948.7,0.84756,0.067815,12.498,{"v":7.63e-36,"d":"7.63E-36"},{"v":7.94e-34,"d":"7.94E-34"},"GYF domain-containing protein."]
["AT1G73600","NMT3",160.41,-3.6926,0.26323,-14.028,1.05E-44,{"v":1.23e-42,"d":"1.23E-42"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. Encodes a S-adenosyl-L-methionine-dependent phosphoethanolamine N-methyltransferase whose expression is responsive to both phosphate (Pi) and phosphite (Phi) in roots.","AT2G32120","HSP70T-2",220.48,2.6308,0.19948,13.188,{"v":1.02e-39,"d":"1.02E-39"},1.16E-37,"full_name=heat-shock protein 70T-2. heat-shock protein 70T-2.","AT2G25140","CLPB4",459.91,1.6965,0.12719,13.338,1.38E-40,{"v":1.52e-38,"d":"1.52E-38"},"full_name=casein lytic proteinase B4. casein lytic proteinase B4. Encodes ClpB4, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Targeted to the mitochondrion, also referred to as ClpB-m. Transcripts of ClpB4 accumulate dramatically at high temperatures, suggesting that it may be involved in response to heat stress.","AT1G64140",null,1583.6,-1.5946,0.094293,-16.911,{"v":3.71e-64,"d":"3.71E-64"},{"v":3.93e-62,"d":"3.93E-62"},"WRKY transcription factor.","AT5G03858",null,109.45,5.0796,0.40648,12.497,{"v":7.79e-36,"d":"7.79E-36"},8.06E-34,"pseudogene. Pseudogene of AT5G03960; IQD12 (IQ-domain 12); calmodulin binding protein"]
["AT1G52230","PSAH2",179.01,-2.797,0.20125,-13.898,{"v":6.49e-44,"d":"6.49E-44"},{"v":7.53e-42,"d":"7.53E-42"},"full_name=photosystem I subunit H2. photosystem I subunit H2. Phosphorylation of this protein is dependent on calcium.","AT3G22550",null,183.78,-2.5104,0.1904,-13.185,{"v":1.07e-39,"d":"1.07E-39"},{"v":1.21e-37,"d":"1.21E-37"},"NAD(P)H-quinone oxidoreductase subunit, putative (DUF581).","AT1G74370",null,391.37,3.0673,0.23029,13.319,{"v":1.79e-40,"d":"1.79E-40"},{"v":1.96e-38,"d":"1.96E-38"},"RING/U-box superfamily protein.","AT4G01870",null,241.3,-2.9564,0.17494,-16.9,{"v":4.54e-64,"d":"4.54E-64"},{"v":4.78e-62,"d":"4.78E-62"},"tolB protein-like protein.","AT2G02570","SPF30",1051,-1.0293,0.082407,-12.49,{"v":8.45e-36,"d":"8.45E-36"},{"v":8.68e-34,"d":"8.68E-34"},"nucleic acid binding/RNA binding protein."]
["AT4G09650","ATPD",202.92,-2.7783,0.20008,-13.886,7.69E-44,{"v":8.86e-42,"d":"8.86E-42"},"full_name=ATP synthase delta-subunit gene. F-type H+-transporting ATPase subunit delta. Encodes the chloroplast ATPase delta-subunit.","AT3G54890","LHCA1",133.11,-3.6205,0.27476,-13.177,1.19E-39,{"v":1.33e-37,"d":"1.33E-37"},"full_name=photosystem I light harvesting complex gene 1. chlorophyll a-b binding protein 6. Encodes a component of the light harvesting complex associated with photosystem I.","AT3G15670","LEA76",81663,1.6251,0.12221,13.298,{"v":2.38e-40,"d":"2.38E-40"},2.57E-38,"Late embryogenesis abundant protein (LEA) family protein.","AT5G09640","SCPL19",754.93,-2.5127,0.14879,-16.887,{"v":5.59e-64,"d":"5.59E-64"},{"v":5.85e-62,"d":"5.85E-62"},"full_name=serine carboxypeptidase-like 19. serine carboxypeptidase-like 19. encodes a serine carboxypeptidase-like (SCPL) protein. Mutants accumulate sinapoylglucose instead of sinapoylcholine, and have increased levels of choline and decreased activity of the enzyme sinapoylglucose:choline sinapoyltransferase.","AT1G33490",null,1410.5,-1.1392,0.091227,-12.487,{"v":8.75e-36,"d":"8.75E-36"},{"v":8.93e-34,"d":"8.93E-34"},"E3 ubiquitin-protein ligase."]
["AT3G58450","USP",575.48,2.9115,0.20981,13.877,{"v":8.74e-44,"d":"8.74E-44"},{"v":1E-41,"d":"1.00E-41"},"Adenine nucleotide alpha hydrolases-like superfamily protein.","AT5G52860","ABCG8",296.46,-2.388,0.18154,-13.154,1.61E-39,1.79E-37,"full_name=ATP-binding cassette G8. ABC-2 type transporter family protein.","AT5G35660",null,41955,4.5454,0.34186,13.296,2.44E-40,{"v":2.63e-38,"d":"2.63E-38"},"Glycine-rich protein family.","AT5G45310",null,3316.2,1.7618,0.10481,16.81,2.08E-63,{"v":2.16e-61,"d":"2.16E-61"},"coiled-coil protein.","AT3G46600",null,572.14,1.6991,0.13615,12.479,9.69E-36,{"v":9.83e-34,"d":"9.83E-34"},"GRAS family transcription factor."]
["AT5G55180",null,575.94,-1.7345,0.12509,-13.866,{"v":1.02e-43,"d":"1.02E-43"},{"v":1.16e-41,"d":"1.16E-41"},"O-Glycosyl hydrolases family 17 protein.","AT5G10580",null,786.71,-1.5216,0.11622,-13.093,{"v":3.62e-39,"d":"3.62E-39"},{"v":3.99e-37,"d":"3.99E-37"},"plant/protein (Protein of unknown function, DUF599).","AT5G62220","GT18",406.69,1.9554,0.14713,13.291,2.62E-40,{"v":2.8E-38,"d":"2.80E-38"},"full_name=glycosyltransferase 18. glycosyltransferase 18. Encodes a Golgi apparatus-localized galactosyltransferase involved in galactosyl-substitution of xyloglucan at position 2.","AT5G20940",null,319.7,-4.5033,0.26823,-16.789,{"v":2.95e-63,"d":"2.95E-63"},3.05E-61,"Glycosyl hydrolase family protein.","AT4G02280","SUS3",12120,-0.73066,0.058675,-12.453,{"v":1.35e-35,"d":"1.35E-35"},1.36E-33,"full_name=sucrose synthase 3. sucrose synthase 3. Encodes a protein with sucrose synthase activity (SUS3). It appears to be important for sucrose metabolism in developing seeds, especially during the late maturation phase, about 18 days after flowering."]
["AT1G50010","TUA2",1765.3,-1.4985,0.10808,-13.865,1.03E-43,{"v":1.16e-41,"d":"1.16E-41"},"full_name=tubulin alpha-2 chain. tubulin alpha-2 chain. Encodes alpha-2,4 tubulin. TUA2 and TUA4 encode identical proteins.","AT2G42790","CSY3",1832.8,1.1337,0.086814,13.059,5.66E-39,{"v":6.21e-37,"d":"6.21E-37"},"full_name=citrate synthase 3. citrate synthase 3. Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development.","AT1G79270","ECT8",209.1,2.3618,0.17819,13.254,{"v":4.27e-40,"d":"4.27E-40"},{"v":4.54e-38,"d":"4.54E-38"},"full_name=evolutionarily conserved C-terminal region 8. evolutionarily conserved C-terminal region 8.","AT1G19900","RUBY",1857.5,-6.6678,0.39876,-16.722,{"v":9.13e-63,"d":"9.13E-63"},{"v":9.38e-61,"d":"9.38E-61"},"glyoxal oxidase-related protein.","AT1G17100","HBP1",1234.3,-1.0036,0.080631,-12.447,{"v":1.46e-35,"d":"1.46E-35"},1.46E-33,"full_name=haem-binding protein 1. SOUL heme-binding family protein."]
["AT2G32530","CSLB03",152.72,3.0544,0.22062,13.845,1.37E-43,{"v":1.54e-41,"d":"1.54E-41"},"full_name=cellulose synthase-like B3. cellulose synthase-like B3. encodes a gene similar to cellulose synthase","AT1G11460","UMAMIT26",98.934,4.4026,0.33866,13,1.22E-38,1.33E-36,"full_name=Usually multiple acids move in and out Transporters 26. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT1G01580","FRO2",181.72,3.4273,0.25877,13.245,{"v":4.85e-40,"d":"4.85E-40"},{"v":5.12e-38,"d":"5.12E-38"},"full_name=ferric reduction oxidase 2. ferric reduction oxidase 2. Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1.","AT4G20360","RABE1b",1334,1.7966,0.10806,16.626,{"v":4.55e-62,"d":"4.55E-62"},{"v":4.65e-60,"d":"4.65E-60"},"full_name=RAB GTPase homolog E1B. RAB GTPase homolog E1B.","AT5G14450",null,169.42,2.7718,0.22275,12.443,{"v":1.52e-35,"d":"1.52E-35"},{"v":1.51e-33,"d":"1.51E-33"},"GDSL-like Lipase/Acylhydrolase superfamily protein."]
["AT2G37460","UMAMIT12",1550,-1.3856,0.10014,-13.838,{"v":1.51e-43,"d":"1.51E-43"},{"v":1.69e-41,"d":"1.69E-41"},"full_name=Usually multiple acids move in and out Transporters 12. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT2G34870","MEE26",144.39,-2.8208,0.21759,-12.964,{"v":1.96e-38,"d":"1.96E-38"},2.12E-36,"full_name=maternal effect embryo arrest 26. hydroxyproline-rich glycoprotein family protein.","AT5G39220",null,214.09,-2.738,0.20702,-13.226,{"v":6.24e-40,"d":"6.24E-40"},{"v":6.54e-38,"d":"6.54E-38"},"alpha/beta-Hydrolases superfamily protein.","AT4G24190","SHD",315.31,-3.0176,0.18156,-16.62,{"v":5.01e-62,"d":"5.01E-62"},{"v":5.08e-60,"d":"5.08E-60"},"full_name=SHEPHERD. Chaperone protein htpG family protein. encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.","AT5G41670","PGD3",234.36,2.1226,0.17082,12.426,{"v":1.89e-35,"d":"1.89E-35"},1.87E-33,"6-phosphogluconate dehydrogenase family protein."]
["AT4G03540","CASPL1C1",204.41,-2.4826,0.17951,-13.83,1.68E-43,1.87E-41,"Uncharacterized protein family (UPF0497).","AT1G04820","TUA4",533.81,-1.7044,0.13169,-12.943,{"v":2.58e-38,"d":"2.58E-38"},2.78E-36,"full_name=tubulin alpha-4 chain. tubulin alpha-4 chain. Encodes an alpha tubulin isoform that is expressed in roots, leaves and flowers.","AT2G22660","ATGRDP1",729.1,-2.495,0.18965,-13.155,{"v":1.58e-39,"d":"1.58E-39"},{"v":1.65e-37,"d":"1.65E-37"},"DNA-binding protein, putative (duplicated DUF1399).","AT1G27350",null,366.97,-2.563,0.15441,-16.599,{"v":7.12e-62,"d":"7.12E-62"},{"v":7.18e-60,"d":"7.18E-60"},"Ribosome associated membrane protein RAMP4.","AT1G18100","E12A11",633.58,-1.2742,0.10256,-12.424,{"v":1.94e-35,"d":"1.94E-35"},{"v":1.9E-33,"d":"1.90E-33"},"PEBP (phosphatidylethanolamine-binding protein) family protein. Encodes a member of the FT and TFL1 family of phosphatidylethanolamine-binding proteins. It is expressed in seeds and up-regulated in response to ABA. Loss of function mutants show decreased rate of germination in the presence of ABA. ABA dependent regulation is mediated by both ABI3 and ABI5. ABI5 promotes MFT expression, primarily in the radicle-hypocotyl transition zone and ABI3 suppresses it in the seed."]
["AT4G01150","CURT1A",706.78,-1.5674,0.11343,-13.818,{"v":1.97e-43,"d":"1.97E-43"},{"v":2.18e-41,"d":"2.18E-41"},"CURVATURE THYLAKOID 1A-like protein.","AT2G23360",null,246.89,-2.3763,0.18386,-12.924,{"v":3.28e-38,"d":"3.28E-38"},{"v":3.51e-36,"d":"3.51E-36"},"filament-like protein (DUF869).","AT4G34520","KCS18",1878.5,-2.4085,0.18316,-13.15,{"v":1.7E-39,"d":"1.70E-39"},{"v":1.77e-37,"d":"1.77E-37"},"full_name=3-ketoacyl-CoA synthase 18. 3-ketoacyl-CoA synthase 18. Encodes KCS18, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT4G16830","ATRGGA",1533.8,1.4713,0.088704,16.586,{"v":8.75e-62,"d":"8.75E-62"},{"v":8.77e-60,"d":"8.77E-60"},"Hyaluronan / mRNA binding family.","AT4G26270","PFK3",864.87,-1.3622,0.10983,-12.404,{"v":2.5e-35,"d":"2.50E-35"},{"v":2.44e-33,"d":"2.44E-33"},"full_name=phosphofructokinase 3. phosphofructokinase 3."]
["AT2G06520","PSBX",1288.3,-1.9055,0.13799,-13.81,{"v":2.23e-43,"d":"2.23E-43"},2.44E-41,"full_name=photosystem II subunit X. photosystem II subunit X. Encodes a protein with sequence similarity to the spinach photosystem II subunit PsbX.","AT5G07460","PMSR2",266.33,-2.0563,0.15923,-12.914,3.75E-38,{"v":3.99e-36,"d":"3.99E-36"},"full_name=peptidemethionine sulfoxide reductase 2. peptidemethionine sulfoxide reductase 2. ubiquitous enzyme that repairs oxidatively damaged proteins. Methionine sulfoxide reductase activity. Mutant lacking reductase activity showed increased protein oxidation, nitration and glycation of specific amino acid residues during darkness.","AT3G44720","ADT4",194.83,-2.8766,0.2198,-13.087,{"v":3.89e-39,"d":"3.89E-39"},{"v":4.01e-37,"d":"4.01E-37"},"full_name=arogenate dehydratase 4. arogenate dehydratase 4. Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identi&#64257;ed in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].","AT1G56340","CRT1a",373.77,-2.313,0.13988,-16.535,2.05E-61,{"v":2.04e-59,"d":"2.04E-59"},"full_name=calreticulin 1a. calreticulin 1a. Encodes one of three Arabidopsis calreticulins. In CRT-deficient mouse fibroblasts, this protein restores ER Ca2+ levels.","AT2G33590","CRL1",7045.8,-0.86557,0.069809,-12.399,{"v":2.64e-35,"d":"2.64E-35"},2.57E-33,"full_name=CCR(Cinnamoyl coA:NADP oxidoreductase)-like 1. NAD(P)-binding Rossmann-fold superfamily protein. Encodes a protein with homology to members of the dihydroflavonol-4-reductase (DFR) superfamily. The expression pattern of AtCRL1 indicates that CRL1 has a role in embryogenesis and seed germination. AtCRL1 is induced by ABA, drought and heat, and is highly expressed in seeds."]
["AT1G51640","EXO70G2",243.14,-2.305,0.1671,-13.794,{"v":2.75e-43,"d":"2.75E-43"},{"v":3e-41,"d":"3.00E-41"},"full_name=exocyst subunit exo70 family protein G2. exocyst subunit exo70 family protein G2. A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.","AT5G01300",null,4278.8,1.4189,0.11069,12.818,{"v":1.29e-37,"d":"1.29E-37"},{"v":1.36e-35,"d":"1.36E-35"},"PEBP (phosphatidylethanolamine-binding protein) family protein.","AT1G49730",null,227.15,-2.6711,0.20434,-13.072,{"v":4.77e-39,"d":"4.77E-39"},{"v":4.88e-37,"d":"4.88E-37"},"Protein kinase superfamily protein.","AT1G27730","STZ",1145.9,-1.8451,0.11163,-16.529,2.25E-61,{"v":2.23e-59,"d":"2.23E-59"},"full_name=salt tolerance zinc finger. salt tolerance zinc finger. Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.","AT5G44110","ABCI21",151.27,6.6569,0.53723,12.391,{"v":2.92e-35,"d":"2.92E-35"},{"v":2.82e-33,"d":"2.82E-33"},"full_name=ATP-binding cassette A21. P-loop containing nucleoside triphosphate hydrolases superfamily protein. Encodes a member of the NAP subfamily of ABC transporters."]
["AT1G05510","OBAP1A",17102,1.3296,0.096447,13.786,{"v":3.09e-43,"d":"3.09E-43"},{"v":3.35e-41,"d":"3.35E-41"},"naphthalene 1,2-dioxygenase subunit alpha (DUF1264). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT5G03760","ATCSLA09",133.61,-3.421,0.2676,-12.784,{"v":2.02e-37,"d":"2.02E-37"},{"v":2.12e-35,"d":"2.12E-35"},"Nucleotide-diphospho-sugar transferases superfamily protein. encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.","AT5G58000","RTN21",224.23,-2.3047,0.1765,-13.058,{"v":5.73e-39,"d":"5.73E-39"},{"v":5.83e-37,"d":"5.83E-37"},"Reticulon family protein.","AT1G68530","KCS6",266.23,-6.474,0.39288,-16.478,{"v":5.25e-61,"d":"5.25E-61"},{"v":5.16e-59,"d":"5.16E-59"},"full_name=3-ketoacyl-CoA synthase 6. 3-ketoacyl-CoA synthase 6. Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT5G54165",null,234.66,-2.034,0.1644,-12.372,{"v":3.69e-35,"d":"3.69E-35"},{"v":3.54e-33,"d":"3.54E-33"},"Avr9/Cf-9 rapidly elicited protein."]
["AT4G28365","ENODL3",121.66,-4.2926,0.31154,-13.779,3.43E-43,{"v":3.69e-41,"d":"3.69E-41"},"full_name=early nodulin-like protein 3. early nodulin-like protein 3.","AT4G21680","NRT1.8",2098.7,1.1922,0.093362,12.77,{"v":2.43e-37,"d":"2.43E-37"},2.53E-35,"full_name=NITRATE TRANSPORTER 1.8. NITRATE TRANSPORTER 1.8. Encodes a nitrate transporter (NRT1.8). Functions in nitrate removal from the xylem sap. Mediates cadmium tolerance.","AT1G66770","SWEET6",137.32,3.1387,0.24059,13.046,{"v":6.74e-39,"d":"6.74E-39"},{"v":6.82e-37,"d":"6.82E-37"},"Nodulin MtN3 family protein.","AT1G64720","CP5",1011.1,1.7649,0.10728,16.451,{"v":8.2E-61,"d":"8.20E-61"},{"v":8.02e-59,"d":"8.02E-59"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein. membrane related protein CP5","AT4G32300","SD2-5",654.8,1.4029,0.1134,12.371,3.75E-35,{"v":3.57e-33,"d":"3.57E-33"},"full_name=S-domain-2 5. S-domain-2 5."]
["AT2G36380","ABCG34",1702.8,1.327,0.09685,13.702,{"v":9.88e-43,"d":"9.88E-43"},1.06E-40,"full_name=ATP-binding cassette G34. pleiotropic drug resistance 6.","AT3G22500","ATECP31",179.56,3.2434,0.25408,12.765,{"v":2.56e-37,"d":"2.56E-37"},{"v":2.66e-35,"d":"2.66E-35"},"full_name=LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP31. Seed maturation protein. late embryogenesis abundant (LEA) protein","AT5G20950","BGLC1",252.21,-2.503,0.19197,-13.039,{"v":7.39e-39,"d":"7.39E-39"},{"v":7.43e-37,"d":"7.43E-37"},"Glycosyl hydrolase family protein.","AT5G07220","BAG3",535.55,-1.7693,0.1076,-16.442,{"v":9.55e-61,"d":"9.55E-61"},{"v":9.28e-59,"d":"9.28E-59"},"full_name=BCL-2-associated athanogene 3. BCL-2-associated athanogene 3. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.","AT2G22430","HB6",293.28,1.8633,0.15076,12.359,{"v":4.33e-35,"d":"4.33E-35"},{"v":4.1E-33,"d":"4.10E-33"},"full_name=homeobox protein 6. homeobox protein 6. Encodes a homeodomain leucine zipper class I (HD-Zip I) protein that is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis."]
["AT3G18080","BGLU44",566.82,-1.7822,0.13059,-13.647,{"v":2.09e-42,"d":"2.09E-42"},{"v":2.23e-40,"d":"2.23E-40"},"full_name=B-S glucosidase 44. B-S glucosidase 44.","AT1G24360","KR",1121.2,-1.2988,0.10181,-12.757,{"v":2.83e-37,"d":"2.83E-37"},{"v":2.92e-35,"d":"2.92E-35"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT3G61880","CYP78A9",7506.7,-2.1834,0.1675,-13.036,{"v":7.69e-39,"d":"7.69E-39"},{"v":7.68e-37,"d":"7.68E-37"},"full_name=cytochrome p450 78a9. cytochrome p450 78a9. Encodes a cytochrome p450 monooxygenase. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis.","AT4G34520","KCS18",297.19,-6.8709,0.41969,-16.372,3.05E-60,2.95E-58,"full_name=3-ketoacyl-CoA synthase 18. 3-ketoacyl-CoA synthase 18. Encodes KCS18, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT4G10020","HSD5",9857.9,-0.65437,0.053009,-12.345,{"v":5.21e-35,"d":"5.21E-35"},{"v":4.91e-33,"d":"4.91E-33"},"full_name=hydroxysteroid dehydrogenase 5. hydroxysteroid dehydrogenase 5. Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5."]
["AT2G16850","PIP2;8",120.17,-4.2353,0.31428,-13.476,2.16E-41,2.29E-39,"full_name=plasma membrane intrinsic protein 2;8. plasma membrane intrinsic protein 2;8.","AT2G06925","PLA2-ALPHA",177.26,-2.5287,0.19833,-12.75,{"v":3.12e-37,"d":"3.12E-37"},{"v":3.2e-35,"d":"3.20E-35"},"Phospholipase A2 family protein. Encodes a secretory phospholipase A2 enzyme, which specifically hydrolyzes the sn-2 position of phospholipids. The enzyme has a preference towards linoleoyl acyl chain over palmitoyl acyl chain. It also has a slight preference for phosphatidylcholine over phosphatidylethanolamine.","AT3G60730",null,4092.7,-1.2903,0.099357,-12.986,{"v":1.46e-38,"d":"1.46E-38"},{"v":1.46e-36,"d":"1.46E-36"},"Plant invertase/pectin methylesterase inhibitor superfamily.","AT3G13520","AGP12",194.71,-6.1703,0.37727,-16.355,{"v":3.99e-60,"d":"3.99E-60"},{"v":3.84e-58,"d":"3.84E-58"},"full_name=arabinogalactan protein 12. arabinogalactan protein 12. Encodes a GPI-anchored arabinogalactan (AG) peptide with a short 'classical' backbone of 10 amino acids, seven of which are conserved among the 4 other Arabidopsis AG peptides. These peptides may be involved in cell signaling.","AT3G21370","BGLU19",102210,-1.2314,0.099761,-12.343,{"v":5.3e-35,"d":"5.30E-35"},{"v":4.97e-33,"d":"4.97E-33"},"full_name=beta glucosidase 19. beta glucosidase 19."]
["AT4G09010","TL29",186.45,-2.5555,0.19012,-13.442,{"v":3.44e-41,"d":"3.44E-41"},{"v":3.62e-39,"d":"3.62E-39"},"full_name=thylakoid lumen 29. ascorbate peroxidase 4. Encodes a thylakoid lumen protein that was initially believed to act as a microsomal ascorbate peroxidase APX4 but to date, no evidence of enzymatic activity has been found.","AT2G45900","TRM13",355.34,-2.5865,0.20296,-12.744,3.37E-37,{"v":3.43e-35,"d":"3.43E-35"},"full_name=TON1 Recruiting Motif 13. Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein.","AT5G15740","RRT1",1728.5,-2.2818,0.17574,-12.984,{"v":1.51e-38,"d":"1.51E-38"},1.49E-36,"O-fucosyltransferase family protein.","AT4G35090","CAT2",3420.6,1.434,0.088205,16.257,1.99E-59,{"v":1.9e-57,"d":"1.90E-57"},"full_name=catalase 2. catalase 2. Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2).","AT5G06570",null,130.4,3.1676,0.25754,12.3,{"v":9.11e-35,"d":"9.11E-35"},{"v":8.48e-33,"d":"8.48E-33"},"alpha/beta-Hydrolases superfamily protein."]
["AT1G28030",null,327.39,-1.9148,0.14249,-13.438,{"v":3.64e-41,"d":"3.64E-41"},{"v":3.81e-39,"d":"3.81E-39"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT1G47980",null,1251.5,1.234,0.096842,12.742,{"v":3.46e-37,"d":"3.46E-37"},{"v":3.5E-35,"d":"3.50E-35"},"desiccation-like protein.","AT3G04720","PR4",248.51,2.5953,0.20016,12.966,{"v":1.92e-38,"d":"1.92E-38"},{"v":1.88e-36,"d":"1.88E-36"},"full_name=pathogenesis-related 4. pathogenesis-related 4. Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection.","AT5G16230","AAD3",202.51,-6.0013,0.36944,-16.244,{"v":2.45e-59,"d":"2.45E-59"},2.33E-57,"Plant stearoyl-acyl-carrier-protein desaturase family protein.","AT3G62090","PIL2",2114.4,-1.6402,0.13348,-12.288,1.05E-34,{"v":9.71e-33,"d":"9.71E-33"},"full_name=phytochrome interacting factor 3-like 2. phytochrome interacting factor 3-like 2. encodes a novel Myc-related bHLH transcription factor, which physically associated with APRR1/TOC1 and is a member of PIF3 transcription factor family."]
["AT3G05600","ATEH1",165.8,-3.1807,0.23874,-13.323,{"v":1.7e-40,"d":"1.70E-40"},{"v":1.77e-38,"d":"1.77E-38"},"alpha/beta-Hydrolases superfamily protein.","AT3G18960","REM7",112.72,-3.4099,0.26762,-12.741,{"v":3.49e-37,"d":"3.49E-37"},{"v":3.51e-35,"d":"3.51E-35"},"AP2/B3-like transcriptional factor family protein.","AT3G27360","H3.1",176.65,2.7107,0.20948,12.94,2.67E-38,{"v":2.61e-36,"d":"2.61E-36"},"Histone superfamily protein.","AT1G11460","UMAMIT26",170.84,-5.7534,0.35498,-16.208,{"v":4.45e-59,"d":"4.45E-59"},{"v":4.2e-57,"d":"4.20E-57"},"full_name=Usually multiple acids move in and out Transporters 26. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT5G40850","UPM1",653,1.3233,0.10818,12.232,{"v":2.09e-34,"d":"2.09E-34"},{"v":1.93e-32,"d":"1.93E-32"},"full_name=urophorphyrin methylase 1. urophorphyrin methylase 1. Encodes a urophorphyrin III methylase that catalyzes S-adenosyl-L-methionine-dependent transmethylation in a multistep process involving the formation of a covalently linked complex with S-adenosyl-L-methionine."]
["AT1G73190","TIP3;1",16655,1.0663,0.080855,13.188,{"v":1.02e-39,"d":"1.02E-39"},1.06E-37,"Aquaporin-like superfamily protein. Moves to the Protein Storage Vacuole in a Golgi independent manner","AT1G78000","SULTR1;2",160.09,2.9018,0.22788,12.734,{"v":3.84e-37,"d":"3.84E-37"},3.84E-35,"full_name=sulfate transporter 1;2. sulfate transporter 1;2. Encodes a sulfate transporter that can restore sulfate uptake capacity of a yeast mutant lacking sulfate transporter genes.","AT3G13080","ABCC3",266.69,1.9744,0.15266,12.933,{"v":2.94e-38,"d":"2.94E-38"},{"v":2.85e-36,"d":"2.85E-36"},"full_name=ATP-binding cassette C3. multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.","AT5G04200","MC9",344.43,-3.76,0.23277,-16.153,1.08E-58,1.01E-56,"full_name=metacaspase 9. metacaspase 9. Encodes a putative metacaspase. Arabidopsis contains three type I MCP genes (MCP1a-c) and six type II MCP genes (MCP2a%E2%80%93f): AtMCP1a/At5g64240, AtMCP1b/At1g02170, AtMCP1c/At4g25110, AtMCP2a/At1g79310, AtMCP2b/At1g79330, AtMCP2c/At1g79320, AtMCP2d/At1g79340, AtMCP2e/At1g16420, AtMCP2f/At5g04200.","AT5G14800","P5CR",779.7,1.191,0.097509,12.214,2.62E-34,2.39E-32,"full_name=pyrroline-5- carboxylate (P5C) reductase. pyrroline-5- carboxylate (P5C) reductase. Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis."]
["AT3G14630","CYP72A9",953.58,1.3411,0.10171,13.186,1.06E-39,1.09E-37,"full_name=cytochrome P450, family 72, subfamily A, polypeptide 9. cytochrome P450, family 72, subfamily A, polypeptide 9. putative cytochrome P450","AT5G62690","TUB2",1366.3,-1.296,0.10193,-12.715,{"v":4.87e-37,"d":"4.87E-37"},{"v":4.84e-35,"d":"4.84E-35"},"full_name=tubulin beta chain 2. tubulin beta chain 2. encodes tubulin beta-2/beta-3 chain","AT1G07400","HSP17.8",205.64,2.7461,0.21253,12.921,{"v":3.42e-38,"d":"3.42E-38"},{"v":3.3e-36,"d":"3.30E-36"},"HSP20-like chaperones superfamily protein.","AT1G35190",null,1523.6,-1.2874,0.079706,-16.151,1.11E-58,{"v":1.04e-56,"d":"1.04E-56"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT5G13370","GH3.15",646.31,1.4785,0.12108,12.21,{"v":2.74e-34,"d":"2.74E-34"},{"v":2.49e-32,"d":"2.49E-32"},"Auxin-responsive GH3 family protein."]
["AT2G38900",null,1051.2,1.9273,0.14638,13.166,1.37E-39,{"v":1.4e-37,"d":"1.40E-37"},"Serine protease inhibitor, potato inhibitor I-type family protein. Predicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860.","AT2G19900","NADP-ME1",7155.6,1.1932,0.093901,12.707,{"v":5.39e-37,"d":"5.39E-37"},5.33E-35,"full_name=NADP-malic enzyme 1. NADP-malic enzyme 1. The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals. The enzyme is active in vitro and appears to function as a homohexamer or homooctamer. It is believed to be a cytosolic protein.","AT2G38340","DREB19",270.24,2.3984,0.18586,12.904,{"v":4.26e-38,"d":"4.26E-38"},{"v":4.09e-36,"d":"4.09E-36"},"full_name=dehydration response element-binding protein 19. Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.","AT5G57800","CER3",184.57,-4.5503,0.28285,-16.087,{"v":3.13e-58,"d":"3.13E-58"},2.91E-56,"full_name=ECERIFERUM 3. Fatty acid hydroxylase superfamily. encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis.","AT1G77680","RRP44B",1497.5,0.92849,0.076083,12.204,{"v":2.97e-34,"d":"2.97E-34"},2.69E-32,"Ribonuclease II/R family protein."]
["AT4G03200",null,943.87,1.412,0.10734,13.154,1.62E-39,{"v":1.64e-37,"d":"1.64E-37"},"catalytics.","AT5G04500","GINT1",654.68,1.6173,0.12796,12.639,1.29E-36,{"v":1.27e-34,"d":"1.27E-34"},"glycosyltransferase family protein 47. a member of the Glycosyltransferase Family 64 (according to CAZy Database)","AT4G23990","CSLG3",814.55,1.9882,0.1541,12.902,{"v":4.39e-38,"d":"4.39E-38"},{"v":4.19e-36,"d":"4.19E-36"},"full_name=cellulose synthase like G3. cellulose synthase like G3. encodes a protein similar to cellulose synthase","AT4G36220","FAH1",1204.4,-2.5934,0.16125,-16.084,{"v":3.32e-58,"d":"3.32E-58"},{"v":3.07e-56,"d":"3.07E-56"},"full_name=ferulic acid 5-hydroxylase 1. ferulic acid 5-hydroxylase 1. encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.","AT3G57520","SIP2",2358.4,2.8986,0.23761,12.199,{"v":3.15e-34,"d":"3.15E-34"},2.83E-32,"full_name=seed imbibition 2. seed imbibition 2. SIP2 encodes a raffinose-specific alpha-galactosidase that catalyzes the breakdown of raffinose into alpha-galatose and sucrose. This enzyme may function in unloading raffinose from the phloem as part of sink metabolism. Although it was originally predicted to act as a raffinose synthase (RS), that activity was not observed for recombinant SIP2."]
["AT2G19900","NADP-ME1",3339.1,1.2743,0.096941,13.145,{"v":1.82e-39,"d":"1.82E-39"},1.84E-37,"full_name=NADP-malic enzyme 1. NADP-malic enzyme 1. The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals. The enzyme is active in vitro and appears to function as a homohexamer or homooctamer. It is believed to be a cytosolic protein.","AT2G30570","PSBW",114.56,-3.4714,0.27534,-12.608,{"v":1.91e-36,"d":"1.91E-36"},1.87E-34,"full_name=photosystem II reaction center W. photosystem II reaction center W. Encodes PsbW, a protein similar to photosystem II reaction center subunit W. Loss of PsbW destabilizes the supramolecular organization of PSII.","AT4G23850","LACS4",359.03,-2.277,0.17655,-12.897,{"v":4.68e-38,"d":"4.68E-38"},4.44E-36,"full_name=long-chain acyl-CoA synthetase 4. AMP-dependent synthetase and ligase family protein.","AT5G46230",null,1105.6,-2.1474,0.13384,-16.045,{"v":6.24e-58,"d":"6.24E-58"},{"v":5.73e-56,"d":"5.73E-56"},"hypothetical protein (Protein of unknown function, DUF538).","AT3G45970","EXLA1",324.33,-1.7113,0.14206,-12.047,{"v":2.02e-33,"d":"2.02E-33"},{"v":1.81e-31,"d":"1.81E-31"},"full_name=expansin-like A1. expansin-like A1. member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)"]
["AT2G33590","CRL1",1513.6,1.2723,0.097004,13.116,2.65E-39,{"v":2.66e-37,"d":"2.66E-37"},"full_name=CCR(Cinnamoyl coA:NADP oxidoreductase)-like 1. NAD(P)-binding Rossmann-fold superfamily protein. Encodes a protein with homology to members of the dihydroflavonol-4-reductase (DFR) superfamily. The expression pattern of AtCRL1 indicates that CRL1 has a role in embryogenesis and seed germination. AtCRL1 is induced by ABA, drought and heat, and is highly expressed in seeds.","AT5G55750",null,1089,1.313,0.10425,12.595,{"v":2.25e-36,"d":"2.25E-36"},{"v":2.19e-34,"d":"2.19E-34"},"hydroxyproline-rich glycoprotein family protein.","AT3G12120","FAD2",4402.2,-1.7502,0.1361,-12.86,{"v":7.58e-38,"d":"7.58E-38"},{"v":7.16e-36,"d":"7.16E-36"},"full_name=fatty acid desaturase 2. fatty acid desaturase 2. Major enzyme responsible for the synthesis of 18:2 fatty acids in the endoplasmic reticulum. Contains His-rich motifs, which contribute to the interaction with the electron donor cytochrome b5. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.","AT4G27130",null,1633.5,1.7043,0.10628,16.036,{"v":7.16e-58,"d":"7.16E-58"},6.53E-56,"Translation initiation factor SUI1 family protein.","AT2G42170",null,860.22,-1.056,0.087716,-12.039,2.22E-33,1.97E-31,"Actin family protein."]
["AT5G39720","AIG2L",113.08,4.5609,0.3481,13.102,{"v":3.21e-39,"d":"3.21E-39"},{"v":3.21e-37,"d":"3.21E-37"},"full_name=avirulence induced gene 2 like protein. avirulence induced protein 2 like protein.","AT2G43520","TI2",1804.8,-1.7958,0.14284,-12.572,{"v":3e-36,"d":"3.00E-36"},2.91E-34,"full_name=trypsin inhibitor protein 2. trypsin inhibitor protein 2. Encodes putative trypsin inhibitor protein which may function in defense against herbivory. Member of the defensin-like (DEFL) family.","AT3G51810","EM1",22732,1.7107,0.13307,12.856,{"v":7.98e-38,"d":"7.98E-38"},7.49E-36,"full_name=LATE EMBRYOGENESIS ABUNDANT 1. Stress induced protein. Encodes a ABA-inducible protein that accumulates during seed maturation, in parallel with its corresponding mRNA but with a 3 d delay. During germination, AtEm1 protein undergoes two successive cleavages before being degraded. Both proteins are more stable than the corresponding mRNA. The gene can be activated by the basic leucine zipper transcription factor ABI5. Expressed predominantly in provascular tissues with the strongest expression in the root tip.","AT4G11360","RHA1B",533.36,2.7707,0.17347,15.972,{"v":1.99e-57,"d":"1.99E-57"},{"v":1.81e-55,"d":"1.81E-55"},"full_name=RING-H2 finger A1B. RING-H2 finger A1B. Encodes a putative RING-H2 finger protein RHA1b.","AT1G65820",null,1877.1,-0.99672,0.082899,-12.023,{"v":2.68e-33,"d":"2.68E-33"},{"v":2.37e-31,"d":"2.37E-31"},"microsomal glutathione s-transferase."]
["AT4G27440","PORB",184.68,-2.9972,0.22893,-13.092,{"v":3.66e-39,"d":"3.66E-39"},{"v":3.63e-37,"d":"3.63E-37"},"full_name=protochlorophyllide oxidoreductase B. protochlorophyllide oxidoreductase B. light-dependent NADPH:protochlorophyllide oxidoreductase B","AT2G22660","ATGRDP1",2699,-1.4399,0.11456,-12.569,{"v":3.13e-36,"d":"3.13E-36"},{"v":3.01e-34,"d":"3.01E-34"},"DNA-binding protein, putative (duplicated DUF1399).","AT5G14995",null,1197.3,-2.9485,0.22962,-12.841,9.66E-38,{"v":9.02e-36,"d":"9.02E-36"},"ECA1 gametogenesis related family protein. Encodes a ECA1 gametogenesis related family protein","AT5G17920","ATMS1",969.42,-2.0831,0.13118,-15.879,{"v":8.82e-57,"d":"8.82E-57"},{"v":7.96e-55,"d":"7.96E-55"},"full_name=methionine synthesis 1. Cobalamin-independent synthase family protein. Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.","AT5G20950","BGLC1",165.56,3.1052,0.25832,12.021,2.76E-33,2.43E-31,"Glycosyl hydrolase family protein."]
["AT3G44300","NIT2",404.52,-1.9402,0.14863,-13.054,{"v":6.05e-39,"d":"6.05E-39"},{"v":5.98e-37,"d":"5.98E-37"},"full_name=nitrilase 2. nitrilase 2. Encodes an enzyme that catalyzes the hydrolysis of indole-3-acetonitrile (IAN) to indole-3-acetic acid (IAA) (nitrile aminohydrolase, EC 3.5.5.1) and IAN to indole-3-acetamide (IAM) at lower levels. Mutants have reduced sensitivity to IAN and are sensitive to IAA. This enzyme likely participates in other non-auxin-related metabolic pathways.","AT1G62180","2024-04-02",351.21,2.4728,0.19678,12.566,{"v":3.24e-36,"d":"3.24E-36"},{"v":3.1e-34,"d":"3.10E-34"},"full_name=5'adenylylphosphosulfate reductase 2. 5'adenylylphosphosulfate reductase 2. encodes a adenosine 5'-phosphosulfate reductase, involved in sulfate assimilation. Is a major effect locus for natural variation of shoot sulfate content in Arabidopsis.","AT5G24910","CYP714A1",469.4,1.8483,0.14406,12.83,1.11E-37,1.03E-35,"full_name=cytochrome P450, family 714, subfamily A, polypeptide 1. cytochrome P450, family 714, subfamily A, polypeptide 1. Member of CYP714A. Encodes one of the two tandemly duplicated gene pair ELA1 (CYP714A1) and ELA2 (CYP714A2), homologs of the rice cytochrome P450 monooxygenase gene EUI1. Double mutation of ELA1 and ELA2 results in increased biomass and enlarged organs.","AT4G22100","BGLU3",1296.6,-1.5964,0.10078,-15.84,{"v":1.64e-56,"d":"1.64E-56"},{"v":1.47e-54,"d":"1.47E-54"},"full_name=beta glucosidase 2. beta glucosidase 2.","AT2G29340",null,615.8,1.4948,0.12441,12.015,{"v":2.96e-33,"d":"2.96E-33"},{"v":2.59e-31,"d":"2.59E-31"},"NAD-dependent epimerase/dehydratase family protein."]
["AT5G41570","WRKY24",148.91,-3.2502,0.24936,-13.034,7.81E-39,{"v":7.68e-37,"d":"7.68E-37"},"full_name=WRKY DNA-binding protein 24. WRKY DNA-binding protein 24. member of WRKY Transcription Factor; Group II-c","AT5G08640","FLS1",517.73,-2.0701,0.16478,-12.563,{"v":3.39e-36,"d":"3.39E-36"},{"v":3.23e-34,"d":"3.23E-34"},"full_name=flavonol synthase 1. flavonol synthase 1. Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols. Co-expressed with CHI and CHS (qRT-PCR).","AT5G09870","CESA5",285.09,-2.2076,0.17306,-12.756,{"v":2.87e-37,"d":"2.87E-37"},{"v":2.65e-35,"d":"2.65E-35"},"full_name=cellulose synthase 5. cellulose synthase 5. Encodes a cellulose synthase CESA5 that produces seed mucilage cellulose.","AT1G62333",null,197.87,-4.8715,0.30842,-15.795,{"v":3.36e-56,"d":"3.36E-56"},{"v":3e-54,"d":"3.00E-54"},"hypothetical protein.","AT5G15450","CLPB3",722.36,-1.2615,0.10503,-12.011,{"v":3.11e-33,"d":"3.11E-33"},{"v":2.7e-31,"d":"2.70E-31"},"full_name=casein lytic proteinase B3. casein lytic proteinase B3. Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype."]
["AT3G10340","PAL4",2237.4,-1.2067,0.092953,-12.982,1.54E-38,{"v":1.51e-36,"d":"1.51E-36"},"full_name=phenylalanine ammonia-lyase 4. phenylalanine ammonia-lyase 4. Encodes PAL4, a putative a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).","AT4G38970","FBA2",100.52,-4.2249,0.33671,-12.548,{"v":4.09e-36,"d":"4.09E-36"},{"v":3.87e-34,"d":"3.87E-34"},"full_name=fructose-bisphosphate aldolase 2. fructose-bisphosphate aldolase 2. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT1G20500",null,276.92,-2.0956,0.16457,-12.734,{"v":3.84e-37,"d":"3.84E-37"},{"v":3.53e-35,"d":"3.53E-35"},"AMP-dependent synthetase and ligase family protein.","AT1G76180","ERD14",399.46,-3.3988,0.21553,-15.769,{"v":5.07e-56,"d":"5.07E-56"},{"v":4.5e-54,"d":"4.50E-54"},"full_name=EARLY RESPONSE TO DEHYDRATION 14. Dehydrin family protein. Encodes a dehydrin protein whose expression is induced early on in response to dehydration stress. This gene's expression to cold occurs in two waves, with early induction occurring within 1 h and secondary induction occurring 5 h after the beginning of cold stress. Expression is also induced in response to ABA but not in response to 2,4-D, BA, and GA3. ERD14 protein is capable of binding Ca2+, especially when the protein is phosphorylated.","AT5G58590","RANBP1",892.33,-1.1975,0.099883,-11.989,{"v":4.07e-33,"d":"4.07E-33"},3.52E-31,"full_name=RAN binding protein 1. RAN binding protein 1. Encodes a Ran-binding protein 1 homolog (RanBP1)."]
["AT4G02690","LFG3",131.29,2.8809,0.22224,12.963,1.99E-38,1.94E-36,"Bax inhibitor-1 family protein.","AT3G01810",null,234.21,-2.0577,0.16403,-12.545,4.26E-36,{"v":4.01e-34,"d":"4.01E-34"},"EEIG1/EHBP1 protein amino-terminal domain protein.","AT3G21370","BGLU19",52504,1.2517,0.09835,12.727,{"v":4.21e-37,"d":"4.21E-37"},3.84E-35,"full_name=beta glucosidase 19. beta glucosidase 19.","AT2G38400","AGT3",675.96,-3.3842,0.21499,-15.741,{"v":7.88e-56,"d":"7.88E-56"},{"v":6.96e-54,"d":"6.96E-54"},"full_name=alanine:glyoxylate aminotransferase 3. alanine:glyoxylate aminotransferase 3. alanine:glyoxylate aminotransferase 2 homolog (AGT3) mRNA,","AT4G04810","MSRB4",591.74,-1.4153,0.1181,-11.983,{"v":4.34e-33,"d":"4.34E-33"},{"v":3.73e-31,"d":"3.73E-31"},"full_name=methionine sulfoxide reductase B4. methionine sulfoxide reductase B4."]
["AT1G47980",null,507.35,1.9833,0.15309,12.955,2.21E-38,{"v":2.14e-36,"d":"2.14E-36"},"desiccation-like protein.","AT5G52920","PKP-BETA1",4271.6,-1.0406,0.083235,-12.502,{"v":7.25e-36,"d":"7.25E-36"},{"v":6.79e-34,"d":"6.79E-34"},"full_name=plastidic pyruvate kinase beta subunit 1. plastidic pyruvate kinase beta subunit 1. encodes a dominant chloroplast pyruvate kinase beta subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mutant plant has wrinkled seeds, with a 50-70% reduction in seed fatty acid content.","AT4G35160","ASMT",3054.5,1.7154,0.13497,12.71,{"v":5.23e-37,"d":"5.23E-37"},{"v":4.75e-35,"d":"4.75E-35"},"O-methyltransferase family protein.","AT4G34881",null,1082.5,1.8268,0.11611,15.734,{"v":8.86e-56,"d":"8.86E-56"},{"v":7.78e-54,"d":"7.78E-54"},"transmembrane protein.","AT3G05500","LDAP3",1702.8,0.90718,0.075781,11.971,{"v":5.04e-33,"d":"5.04E-33"},{"v":4.31e-31,"d":"4.31E-31"},"Rubber elongation factor protein (REF). Encodes a protein that associates with lipid droplet surfaces."]
["AT3G62660","GATL7",783.95,1.6014,0.12415,12.899,{"v":4.57e-38,"d":"4.57E-38"},{"v":4.4e-36,"d":"4.40E-36"},"full_name=galacturonosyltransferase-like 7. galacturonosyltransferase-like 7. Encodes a protein with putative galacturonosyltransferase activity.","AT1G77590","LACS9",340.99,-1.9281,0.15424,-12.501,{"v":7.4E-36,"d":"7.40E-36"},{"v":6.9e-34,"d":"6.90E-34"},"full_name=long chain acyl-CoA synthetase 9. long chain acyl-CoA synthetase 9. Encodes major plastidic long chain acyl-CoA synthetase with a slight substrate preference of oleic acid over any of the other fatty acids.","AT5G07330",null,4089.6,1.4077,0.11081,12.704,{"v":5.61e-37,"d":"5.61E-37"},{"v":5.07e-35,"d":"5.07E-35"},"NFU1 iron-sulfur cluster protein.","AT4G26050","PIRL8",1588.8,2.3112,0.14737,15.684,1.96E-55,1.71E-53,"full_name=plant intracellular ras group-related LRR 8. plant intracellular ras group-related LRR 8. Encodes PIRL8, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.","AT2G25140","CLPB4",1503.5,-0.91913,0.07699,-11.938,{"v":7.48e-33,"d":"7.48E-33"},{"v":6.37e-31,"d":"6.37E-31"},"full_name=casein lytic proteinase B4. casein lytic proteinase B4. Encodes ClpB4, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Targeted to the mitochondrion, also referred to as ClpB-m. Transcripts of ClpB4 accumulate dramatically at high temperatures, suggesting that it may be involved in response to heat stress."]
["AT3G22840","ELIP1",282.33,2.6754,0.20793,12.867,{"v":6.9e-38,"d":"6.90E-38"},{"v":6.61e-36,"d":"6.61E-36"},"full_name=EARLY LIGHT-INDUCABLE PROTEIN. Chlorophyll A-B binding family protein. Encodes an early light-inducible protein.","AT3G44720","ADT4",778.78,-1.5202,0.12178,-12.483,{"v":9.23e-36,"d":"9.23E-36"},8.55E-34,"full_name=arogenate dehydratase 4. arogenate dehydratase 4. Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identi&#64257;ed in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].","AT3G10010","DML2",302.95,-1.8724,0.14767,-12.68,{"v":7.68e-37,"d":"7.68E-37"},{"v":6.9e-35,"d":"6.90E-35"},"full_name=demeter-like 2. demeter-like 2. Encodes a protein with DNA glycosylase activity that is involved in maintaining methylation marks.","AT3G16120",null,198.55,5.7236,0.36536,15.665,{"v":2.61e-55,"d":"2.61E-55"},{"v":2.26e-53,"d":"2.26E-53"},"Dynein light chain type 1 family protein.","AT1G34370","STOP1",1682.1,1.1674,0.097907,11.924,{"v":8.909999999999999e-33,"d":"8.91E-33"},{"v":7.55e-31,"d":"7.55E-31"},"full_name=sensitive to proton rhizotoxicity 1. C2H2 and C2HC zinc fingers superfamily protein. Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity. Cell wall of the mutant is unstable in low pH medium (pH 4.5) in low Ca solution. This would mediate Ca-alleviation of low pH stress through pectin-Ca interaction."]
["AT3G23560","ALF5",293.68,1.9864,0.15449,12.858,7.76E-38,{"v":7.38e-36,"d":"7.38E-36"},"full_name=ABERRANT LATERAL ROOT FORMATION 5. MATE efflux family protein. Member of the multidrug and toxic compound extrusion (MATE) family, protects roots from inhibitory compounds.","AT5G60220","TET4",283.42,1.9511,0.1566,12.459,{"v":1.25e-35,"d":"1.25E-35"},{"v":1.15e-33,"d":"1.15E-33"},"full_name=tetraspanin4. tetraspanin4. Member of TETRASPANIN family","AT3G05020","ACP1",415.3,-2.5883,0.20453,-12.655,1.05E-36,{"v":9.39e-35,"d":"9.39E-35"},"full_name=acyl carrier protein 1. acyl carrier protein 1. encodes an acyl carrier protein expressed in leaves, roots, and dry seeds. Protein is not regulated by light.","AT4G33150","LKR",650.45,-1.6609,0.10607,-15.658,2.94E-55,2.54E-53,"lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme. Encodes two proteins. One protein is the monofunctional saccharopine dehydrogenase involved in lysine degradation. The longer protein from the same LKR/SDH locus is bifunctional and also has saccharopine dehydrogenase activity. The monofunctional SDH functions mainly to enhance the flux of lysine catabolism. Gene expression is induced by abscisic acid, jasmonate, and under sucrose starvation.","AT5G37670","HSP15.7",532.89,-1.4214,0.11936,-11.908,{"v":1.07e-32,"d":"1.07E-32"},{"v":9.03e-31,"d":"9.03E-31"},"HSP20-like chaperones superfamily protein."]
["AT2G45300",null,302.43,-1.9973,0.15573,-12.825,1.18E-37,1.12E-35,"RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta. encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis","AT5G14610","RH46",510.96,-1.5539,0.12485,-12.446,1.48E-35,1.36E-33,"DEAD box RNA helicase family protein.","AT2G25625","CV",476.67,1.926,0.15237,12.641,1.26E-36,1.12E-34,"histone deacetylase-like protein.","AT5G23750",null,240.06,-4.1743,0.26675,-15.649,{"v":3.38e-55,"d":"3.38E-55"},{"v":2.9e-53,"d":"2.90E-53"},"Remorin family protein.","AT4G35630","PSAT",476.33,-1.3287,0.11159,-11.907,1.09E-32,9.16E-31,"full_name=phosphoserine aminotransferase. phosphoserine aminotransferase. Encodes a phosphoserine aminotransferase which is involved in serine biosynthesis in the chloroplast which operates via the phosphorylated pathway."]
["AT5G65550",null,285.17,2.2673,0.17704,12.806,1.51E-37,{"v":1.42e-35,"d":"1.42E-35"},"UDP-Glycosyltransferase superfamily protein.","AT1G56170","NF-YC2",637.05,-1.4271,0.11492,-12.419,{"v":2.06e-35,"d":"2.06E-35"},1.88E-33,"full_name=nuclear factor Y, subunit C2. nuclear factor Y, subunit C2. Encodes a protein with similarity to a subunit of the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5B) and expressed in vegetative and reproductive tissues","AT5G09590","MTHSC70-2",1751.7,1.5034,0.11915,12.618,{"v":1.68e-36,"d":"1.68E-36"},1.49E-34,"full_name=mitochondrial HSO70 2. mitochondrial HSO70 2. heat shock protein 70 (Hsc70-5); nuclear","AT5G42020","BIP2",480.52,-1.9789,0.12655,-15.638,{"v":4.03e-55,"d":"4.03E-55"},{"v":3.45e-53,"d":"3.45E-53"},"Heat shock protein 70 (Hsp 70) family protein. Luminal binding protein (BiP2) involved in polar nuclei fusion during proliferation of endosperm nuclei.","AT4G27170","SESA4",2384.5,-1.5899,0.13391,-11.873,1.64E-32,1.36E-30,"full_name=seed storage albumin 4. seed storage albumin 4."]
["AT1G02700",null,435.17,2.1259,0.16768,12.678,7.85E-37,{"v":7.35e-35,"d":"7.35E-35"},"GATA transcription factor-like protein.","AT1G72100",null,3188,1.1384,0.092113,12.358,{"v":4.38e-35,"d":"4.38E-35"},{"v":3.98e-33,"d":"3.98E-33"},"late embryogenesis abundant domain-containing protein / LEA domain-containing protein.","AT3G12203","scpl17",536.77,-2.6655,0.21145,-12.606,1.95E-36,{"v":1.72e-34,"d":"1.72E-34"},"full_name=serine carboxypeptidase-like 17. serine carboxypeptidase-like 17.","AT4G09960","STK",255.4,-4.7167,0.30218,-15.609,6.35E-55,{"v":5.41e-53,"d":"5.41E-53"},"full_name=SEEDSTICK. K-box region and MADS-box transcription factor family protein. Encodes a MADS box transcription factor expressed in the carpel and ovules. Plays a maternal role in fertilization and seed development.","AT2G33770","PHO2",6127.5,-0.84639,0.071303,-11.87,1.69E-32,{"v":1.4e-30,"d":"1.40E-30"},"full_name=phosphate 2. phosphate 2. Encodes a ubiquitin-conjugating E2 enzyme. UBC24 mRNA accumulation is suppressed by miR399f, miR399b and miR399c. Involved in phosphate starvation response and mediates degradation of PHO1 and PHT1s at endomembrane. Its expression is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots."]
["AT3G19920",null,1015.4,1.5018,0.11938,12.58,{"v":2.73e-36,"d":"2.73E-36"},2.55E-34,"BTB/POZ domain protein.","AT2G05100","LHCB2.1",131.55,-3.4574,0.28039,-12.33,{"v":6.21e-35,"d":"6.21E-35"},{"v":5.61e-33,"d":"5.61E-33"},"full_name=photosystem II light harvesting complex gene 2.1. photosystem II light harvesting complex protein 2.1. Lhcb2.1 protein encoding a subunit of the light harvesting complex II. Member of a gene family with high degree of sequence similarity. Initially LHCB2.3 was considered as a separate gene but appears to be an allele of LHCB2.1.","AT3G22960","PKP-ALPHA",1186.4,-2.0879,0.16584,-12.59,{"v":2.4E-36,"d":"2.40E-36"},{"v":2.1e-34,"d":"2.10E-34"},"Pyruvate kinase family protein. encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.","AT1G64110","DAA1",4241.7,1.7063,0.10997,15.515,{"v":2.73e-54,"d":"2.73E-54"},{"v":2.31e-52,"d":"2.31E-52"},"full_name=DUO1-activated ATPase 1. P-loop containing nucleoside triphosphate hydrolases superfamily protein. Target promoter of the male germline-specific transcription factor DUO1.","AT4G33150","LKR",255.81,-1.7185,0.14507,-11.846,{"v":2.26e-32,"d":"2.26E-32"},1.87E-30,"lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme. Encodes two proteins. One protein is the monofunctional saccharopine dehydrogenase involved in lysine degradation. The longer protein from the same LKR/SDH locus is bifunctional and also has saccharopine dehydrogenase activity. The monofunctional SDH functions mainly to enhance the flux of lysine catabolism. Gene expression is induced by abscisic acid, jasmonate, and under sucrose starvation."]
["AT5G63350","AITR6",448.74,2.0626,0.16408,12.57,{"v":3.07e-36,"d":"3.07E-36"},{"v":2.85e-34,"d":"2.85E-34"},"von willebrand factor A domain protein.","AT1G56190","CPGK2",283.13,-1.8826,0.15278,-12.322,{"v":6.88e-35,"d":"6.88E-35"},{"v":6.19e-33,"d":"6.19E-33"},"Phosphoglycerate kinase family protein.","AT1G68570","NPF3.1",129.13,4.793,0.3811,12.577,{"v":2.84e-36,"d":"2.84E-36"},{"v":2.47e-34,"d":"2.47E-34"},"Major facilitator superfamily protein.","AT5G26742","emb1138",780,1.7057,0.10994,15.515,2.76E-54,{"v":2.32e-52,"d":"2.32E-52"},"full_name=embryo defective 1138. DEAD box RNA helicase (RH3).","AT4G11310","CP1",52989,-0.92205,0.07787,-11.841,{"v":2.4e-32,"d":"2.40E-32"},1.97E-30,"Papain family cysteine protease. cysteine proteinase precursor-like protein"]
["AT3G54920","PMR6",335.54,-1.8548,0.14756,-12.57,{"v":3.11e-36,"d":"3.11E-36"},{"v":2.87e-34,"d":"2.87E-34"},"full_name=powdery mildew resistant 6. Pectin lyase-like superfamily protein. Powdery mildew resistant mutant encodes a pectate lyase-like protein","AT1G27350",null,2316,-1.008,0.081903,-12.307,{"v":8.29e-35,"d":"8.29E-35"},{"v":7.41e-33,"d":"7.41E-33"},"Ribosome associated membrane protein RAMP4.","AT1G62290","PASPA2",12877,-1.2327,0.098126,-12.563,{"v":3.38e-36,"d":"3.38E-36"},{"v":2.93e-34,"d":"2.93E-34"},"Saposin-like aspartyl protease family protein.","AT1G07590",null,2059,-3.3662,0.2174,-15.484,{"v":4.46e-54,"d":"4.46E-54"},{"v":3.73e-52,"d":"3.73E-52"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT3G62730",null,173.7,-3.7321,0.31559,-11.826,{"v":2.87e-32,"d":"2.87E-32"},{"v":2.34e-30,"d":"2.34E-30"},"desiccation-like protein."]
["AT1G21540",null,125.44,-3.6017,0.28679,-12.559,{"v":3.57e-36,"d":"3.57E-36"},3.27E-34,"AMP-dependent synthetase and ligase family protein.","AT4G03050","AOP3",4201.6,-1.2665,0.1032,-12.272,{"v":1.27e-34,"d":"1.27E-34"},{"v":1.13e-32,"d":"1.13E-32"},"2-oxoglutarate-dependent dioxygenase. Transcriptional silent in leaf tissues of ecotype Col. The transcribed allele in ecotype Ler encodes a 2-oxoglutarate-dependent dioxygenase which is involved in glucosinolate biosynthesis. The natural variation in this locus explains the diversification of hydroxyalkyl glucosinolates among different ecotypes of Arabidopsis.","AT1G30530","UGT78D1",223.11,-2.2604,0.17998,-12.56,3.52E-36,{"v":3.04e-34,"d":"3.04E-34"},"full_name=UDP-glucosyl transferase 78D1. UDP-glucosyl transferase 78D1. The At1g30530 gene encodes a UDP-rhamnose:flavonol-3-O-rhamnosyltransferase (UGT78D1) attaching a rhamnosyl residue to the 3-O-position of the flavonols kaempferol and quercetin","AT1G73210",null,563.75,-1.8604,0.12041,-15.45,{"v":7.55e-54,"d":"7.55E-54"},{"v":6.29e-52,"d":"6.29E-52"},"hypothetical protein (DUF789).","AT5G65660",null,398.6,2.3768,0.20136,11.804,{"v":3.74e-32,"d":"3.74E-32"},3.04E-30,"hydroxyproline-rich glycoprotein family protein."]
["AT1G04820","TUA4",1643.5,-1.4372,0.11463,-12.538,{"v":4.6e-36,"d":"4.60E-36"},{"v":4.2e-34,"d":"4.20E-34"},"full_name=tubulin alpha-4 chain. tubulin alpha-4 chain. Encodes an alpha tubulin isoform that is expressed in roots, leaves and flowers.","AT5G07360",null,352.62,1.9512,0.15926,12.252,{"v":1.65e-34,"d":"1.65E-34"},{"v":1.46e-32,"d":"1.46E-32"},"Amidase family protein.","AT3G03620",null,365.14,1.7776,0.14175,12.54,{"v":4.49e-36,"d":"4.49E-36"},3.85E-34,"MATE efflux family protein.","AT3G52780","PAP20",173.44,-4.9737,0.32243,-15.426,{"v":1.1e-53,"d":"1.10E-53"},{"v":9.13e-52,"d":"9.13E-52"},"Purple acid phosphatases superfamily protein.","AT1G15960","NRAMP6",113.64,-2.9084,0.24656,-11.796,{"v":4.09e-32,"d":"4.09E-32"},{"v":3.31e-30,"d":"3.31E-30"},"full_name=NRAMP metal ion transporter 6. NRAMP metal ion transporter 6. member of Nramp2 family"]
["AT1G30860",null,521.13,1.848,0.14741,12.536,{"v":4.76e-36,"d":"4.76E-36"},{"v":4.32e-34,"d":"4.32E-34"},"RING/U-box superfamily protein.","AT2G02850","ARPN",393.28,2.1648,0.17715,12.221,{"v":2.41e-34,"d":"2.41E-34"},{"v":2.12e-32,"d":"2.12E-32"},"full_name=plantacyanin. plantacyanin. Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.","AT5G56369",null,254.26,-2.7408,0.21859,-12.539,{"v":4.59e-36,"d":"4.59E-36"},{"v":3.92e-34,"d":"3.92E-34"},"Defensin-like (DEFL) family protein. Encodes a defensin-like (DEFL) family protein.","AT5G05320",null,1366.2,1.3847,0.089889,15.404,{"v":1.53e-53,"d":"1.53E-53"},1.27E-51,"FAD/NAD(P)-binding oxidoreductase family protein.","AT5G60220","TET4",1760.6,-0.9254,0.078475,-11.792,{"v":4.27e-32,"d":"4.27E-32"},3.44E-30,"full_name=tetraspanin4. tetraspanin4. Member of TETRASPANIN family"]
["AT4G21280","PSBQA",104.93,-3.7039,0.29584,-12.52,5.81E-36,{"v":5.25e-34,"d":"5.25E-34"},"full_name=photosystem II subunit QA. photosystem II subunit QA. Encodes the PsbQ subunit of the oxygen evolving complex of photosystem II.","AT2G31980","CYS2",1168.9,-1.214,0.099406,-12.212,{"v":2.67e-34,"d":"2.67E-34"},2.34E-32,"full_name=PHYTOCYSTATIN 2. PHYTOCYSTATIN 2.","AT3G21380",null,16245,1.2776,0.10203,12.522,{"v":5.69e-36,"d":"5.69E-36"},{"v":4.83e-34,"d":"4.83E-34"},"Mannose-binding lectin superfamily protein.","AT3G47640","PYE",709.4,-1.8723,0.12167,-15.388,{"v":1.98e-53,"d":"1.98E-53"},1.63E-51,"full_name=POPEYE. basic helix-loop-helix (bHLH) DNA-binding superfamily protein. Encodes POPEYE (PYE), a bHLH transcription factor regulating response to iron deficiency in Arabidopsis roots.","AT5G51830","FRK1",854.38,1.1086,0.094155,11.774,{"v":5.31e-32,"d":"5.31E-32"},{"v":4.25e-30,"d":"4.25E-30"},"pfkB-like carbohydrate kinase family protein."]
["AT5G50315",null,233.65,2.4012,0.19189,12.513,{"v":6.33e-36,"d":"6.33E-36"},{"v":5.69e-34,"d":"5.69E-34"},"transposable_element_gene.","AT3G06860","MFP2",1698.2,1.1477,0.094014,12.208,{"v":2.81e-34,"d":"2.81E-34"},{"v":2.45e-32,"d":"2.45E-32"},"full_name=multifunctional protein 2. multifunctional protein 2. Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes.","AT4G15620","CASPL1E2",280.61,1.9695,0.15752,12.503,{"v":7.15e-36,"d":"7.15E-36"},{"v":6.04e-34,"d":"6.04E-34"},"Uncharacterized protein family (UPF0497).","AT2G36380","ABCG34",769.5,-2.0708,0.13465,-15.379,{"v":2.28e-53,"d":"2.28E-53"},{"v":1.86e-51,"d":"1.86E-51"},"full_name=ATP-binding cassette G34. pleiotropic drug resistance 6.","AT5G25180","CYP71B14",2585.3,-1.1791,0.10015,-11.773,{"v":5.38e-32,"d":"5.38E-32"},{"v":4.28e-30,"d":"4.28E-30"},"full_name=cytochrome P450, family 71, subfamily B, polypeptide 14. cytochrome P450, family 71, subfamily B, polypeptide 14. putative cytochrome P450"]
["AT1G77530",null,299.63,-1.9928,0.15932,-12.508,{"v":6.74e-36,"d":"6.74E-36"},{"v":6.03e-34,"d":"6.03E-34"},"O-methyltransferase family protein.","AT3G02630","ACP",2257.1,-1.1617,0.095267,-12.195,{"v":3.32e-34,"d":"3.32E-34"},{"v":2.88e-32,"d":"2.88E-32"},"Plant stearoyl-acyl-carrier-protein desaturase family protein.","AT3G05910","ATPAE12",206.46,-2.8327,0.22677,-12.491,{"v":8.32e-36,"d":"8.32E-36"},{"v":7e-34,"d":"7.00E-34"},"Pectinacetylesterase family protein.","AT3G21560","UGT84A2",1214.6,-1.864,0.12144,-15.349,{"v":3.62e-53,"d":"3.62E-53"},2.94E-51,"full_name=UDP-glucosyl transferase 84A2. UDP-Glycosyltransferase superfamily protein. Encodes a protein with sinapic acid:UDP-glucose glucosyltransferase activity. Mutants defective in this gene are hyper-fluorescent (which accumulate in their trichomes a compound that is likely to be 3',5'-dimethoxynaringenin chalcone or sinapoyltriacetic acid lactone, potential products of the concerted action of 4-coumarate CoA ligase and chalcone synthase on sinapic acid). Also shown to be required for Arabidopsis nonhost resistance to the Asian soybean rust pathogen Phakopsora pachyrhizi.","AT4G21580",null,1556.9,-0.92486,0.078583,-11.769,{"v":5.619999999999999e-32,"d":"5.62E-32"},{"v":4.45e-30,"d":"4.45E-30"},"oxidoreductase, zinc-binding dehydrogenase family protein."]
["AT5G27200","ACP5",819.46,-1.6648,0.13454,-12.374,{"v":3.61e-35,"d":"3.61E-35"},{"v":3.22e-33,"d":"3.22E-33"},"full_name=acyl carrier protein 5. acyl carrier protein 5. encodes an acyl carrier protein","AT1G12000",null,464.03,-1.6359,0.13435,-12.177,{"v":4.13e-34,"d":"4.13E-34"},{"v":3.57e-32,"d":"3.57E-32"},"Phosphofructokinase family protein.","AT1G58440","XF1",290.73,-2.2773,0.18432,-12.355,{"v":4.59e-35,"d":"4.59E-35"},{"v":3.84e-33,"d":"3.84E-33"},"FAD/NAD(P)-binding oxidoreductase family protein. Encodes a putative protein that has been speculated, based on sequence similarities, to have squalene monooxygenase activity.","AT3G10020",null,8628.8,2.0119,0.13156,15.293,{"v":8.56e-53,"d":"8.56E-53"},{"v":6.92e-51,"d":"6.92E-51"},"plant/protein.","AT1G20630","CAT1",1656.1,-0.98729,0.083981,-11.756,{"v":6.57e-32,"d":"6.57E-32"},{"v":5.18e-30,"d":"5.18E-30"},"full_name=catalase 1. catalase 1. Catalyzes the reduction of hydrogen peroxide using heme group as cofactor. Protects cells from toxicity by H2O2."]
["AT2G34430","LHB1B1",309.07,-1.9573,0.15825,-12.369,{"v":3.87e-35,"d":"3.87E-35"},3.43E-33,null,"AT5G04590","SIR",1131.7,1.2886,0.10592,12.166,{"v":4.72e-34,"d":"4.72E-34"},4.05E-32,"full_name=sulfite reductase. sulfite reductase. A.thaliana gene encoding sulfite reductase.","AT3G04170",null,3687.1,-2.6572,0.21521,-12.347,5.06E-35,{"v":4.21e-33,"d":"4.21E-33"},"RmlC-like cupins superfamily protein.","AT5G63190","MRF1",3770.5,1.593,0.10418,15.292,{"v":8.71e-53,"d":"8.71E-53"},7.01E-51,"MA3 domain-containing protein.","AT2G23110",null,4175.8,-0.98675,0.084043,-11.741,{"v":7.85e-32,"d":"7.85E-32"},{"v":6.16e-30,"d":"6.16E-30"},"Late embryogenesis abundant protein, group 6."]
["AT1G02850","BGLU11",4347.2,1.6108,0.13105,12.292,{"v":1e-34,"d":"1.00E-34"},{"v":8.82e-33,"d":"8.82E-33"},"full_name=beta glucosidase 11. beta glucosidase 11.","AT1G74960","FAB1",2091.4,-1.1122,0.091432,-12.164,{"v":4.85e-34,"d":"4.85E-34"},{"v":4.14e-32,"d":"4.14E-32"},"full_name=fatty acid biosynthesis 1. fatty acid biosynthesis 1. Encodes a plastidic beta-ketoacyl-ACP synthase II, involved in fatty acid elongation from 16:0-ACP to 18:0-ACP. Homozygous knock-out mutants are embryo lethal, indicating early embryo development is sensitive to elevated 16:0.","AT4G39350","CESA2",932.98,-1.3211,0.10708,-12.338,{"v":5.68e-35,"d":"5.68E-35"},{"v":4.71e-33,"d":"4.71E-33"},"full_name=cellulose synthase A2. cellulose synthase A2. Encodes a cellulose synthase isomer, related to CESA6. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.","AT5G58930","OPL4",228.39,-2.9779,0.19478,-15.289,{"v":9.1e-53,"d":"9.10E-53"},{"v":7.28e-51,"d":"7.28E-51"},"hypothetical protein (DUF740).","AT3G26240",null,173.48,2.2986,0.1963,11.71,1.13E-31,{"v":8.83e-30,"d":"8.83E-30"},"Cysteine/Histidine-rich C1 domain family protein."]
["AT1G58290","HEMA1",366.35,-1.9078,0.15531,-12.284,{"v":1.1e-34,"d":"1.10E-34"},{"v":9.69e-33,"d":"9.69E-33"},"Glutamyl-tRNA reductase family protein. Encodes a protein with glutamyl-tRNA reductase (GluTR) activity, catalyzing the NADPH-dependent reduction of Glu-tRNA(Glu) to glutamate 1-semialdehyde (GSA) with the release of free tRNA(Glu). It is involved in the early steps of chlorophyll biosynthesis.","AT5G13980",null,390.59,-1.6588,0.13643,-12.159,{"v":5.17e-34,"d":"5.17E-34"},{"v":4.39e-32,"d":"4.39E-32"},"Glycosyl hydrolase family 38 protein.","AT2G34590",null,210.7,-2.3333,0.18915,-12.336,{"v":5.82e-35,"d":"5.82E-35"},4.79E-33,"Transketolase family protein.","AT5G25450",null,243.6,2.9484,0.19295,15.28,1.04E-52,{"v":8.26e-51,"d":"8.26E-51"},"Cytochrome bd ubiquinol oxidase, 14kDa subunit.","AT5G16650",null,911.23,1.2306,0.10527,11.69,1.44E-31,1.12E-29,"Chaperone DnaJ-domain superfamily protein."]
["AT4G37550","IAMH1",691.43,-1.3334,0.10872,-12.264,1.41E-34,1.23E-32,"Acetamidase/Formamidase family protein.","AT4G30020",null,132.95,-2.9752,0.2453,-12.129,{"v":7.45e-34,"d":"7.45E-34"},{"v":6.31e-32,"d":"6.31E-32"},"PA-domain containing subtilase family protein.","AT4G32410","CESA1",1013.9,-1.411,0.11443,-12.331,{"v":6.17e-35,"d":"6.17E-35"},{"v":5.06e-33,"d":"5.06E-33"},"full_name=cellulose synthase 1. cellulose synthase 1. Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.","AT1G66200","GSR2",154.91,-5.028,0.32928,-15.27,1.21E-52,{"v":9.63e-51,"d":"9.63E-51"},"full_name=glutamine synthase clone F11. hypothetical protein. encodes a cytosolic glutamate synthetase, this enzyme has low affinity with substrate ammonium","AT4G30960","SIP3",1099.9,1.5218,0.1302,11.688,{"v":1.47e-31,"d":"1.47E-31"},1.14E-29,"full_name=SOS3-interacting protein 3. SOS3-interacting protein 3. Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance."]
["AT3G11430","GPAT5",335.62,-2.075,0.16929,-12.257,{"v":1.55e-34,"d":"1.55E-34"},{"v":1.34e-32,"d":"1.34E-32"},"full_name=GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 5. glycerol-3-phosphate acyltransferase 5. sn-glycerol-3-phosphate 2-O-acyltransferas, involved in the biosynthesis of suberin polyester.","AT4G34260","FUC95A",519.49,-1.7317,0.14283,-12.124,{"v":7.87e-34,"d":"7.87E-34"},6.63E-32,"1,2-alpha-L-fucosidase.","AT5G01300",null,10248,1.518,0.12321,12.321,{"v":6.97e-35,"d":"6.97E-35"},{"v":5.69e-33,"d":"5.69E-33"},"PEBP (phosphatidylethanolamine-binding protein) family protein.","AT1G12110","NRT1.1",399.2,-1.9762,0.12972,-15.235,2.08E-52,{"v":1.64e-50,"d":"1.64E-50"},"full_name=nitrate transporter 1.1. nitrate transporter 1.1. Encodes NRT1.1 (CHL1), a dual-affinity nitrate transporter. The protein is expressed in guard cells and function in stomatal opening. Mutants have less transpiration and are more tolerant to drought. Expressed in lateral roots. Involved in nitrate signaling which enables the plant root system to detect and exploit nitrate-rich soil patches. Comparing to the wild type, the mutant displays a strongly decreased lateral root proliferation phenotype in nitrate rich patches on growth medium.","AT1G19490",null,1165.6,1.0136,0.08678,11.68,{"v":1.61e-31,"d":"1.61E-31"},1.24E-29,"Basic-leucine zipper (bZIP) transcription factor family protein."]
["AT5G01520","AIRP2",203.69,2.4008,0.19593,12.253,{"v":1.62e-34,"d":"1.62E-34"},{"v":1.4e-32,"d":"1.40E-32"},"full_name=ABA Insensitive RING Protein 2. RING/U-box superfamily protein.","AT1G29050","TBL38",1006.6,-1.2196,0.10072,-12.109,{"v":9.48e-34,"d":"9.48E-34"},{"v":7.95e-32,"d":"7.95E-32"},"full_name=TRICHOME BIREFRINGENCE-LIKE 38. TRICHOME BIREFRINGENCE-LIKE 38. Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT2G21490","LEA",19025,1.3157,0.10697,12.299,{"v":9.16e-35,"d":"9.16E-35"},{"v":7.44e-33,"d":"7.44E-33"},"full_name=dehydrin LEA. dehydrin LEA.","AT4G32770","VTE1",1661.7,-1.3974,0.091743,-15.232,{"v":2.16e-52,"d":"2.16E-52"},{"v":1.7e-50,"d":"1.70E-50"},"full_name=VITAMIN E DEFICIENT 1. tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1). Tocopherol cyclase involved in tocopherol (vitamin E)synthesis. VTE1 over-expressing plants have increased tocopherol indicating VTE1 is a major limiting factor in tocopherol synthesis. Mutants defective in this gene accumulate high amounts of zeaxanthin in conditions of high light or low temperature. Plays a role in the adaptation to low temperature stress, notably phloem loading.","AT1G75220","ERDL6",1448.3,1.3026,0.11154,11.678,1.65E-31,1.26E-29,"full_name=ERD6-like 6. Major facilitator superfamily protein. Encodes a vacuolar glucose exporter that is induced in response to factors that activate vacuolar glucose pools like darkness, heat stress and wounding and repressed during conditions that trigger glucose accumulation in the vacuole like cold stress and external sugar supply."]
["AT2G20260","PSAE-2",646.68,-1.4003,0.11439,-12.242,{"v":1.85e-34,"d":"1.85E-34"},1.59E-32,"full_name=photosystem I subunit E-2. photosystem I subunit E-2. Encodes subunit E of photosystem I.","AT1G08380","PSAO",87.199,-3.9984,0.33027,-12.106,{"v":9.77e-34,"d":"9.77E-34"},{"v":8.15e-32,"d":"8.15E-32"},"full_name=photosystem I subunit O. photosystem I subunit O. Encodes subunit O of photosystem I.","AT5G66110","HIPP27",633.82,1.5779,0.12849,12.281,{"v":1.15e-34,"d":"1.15E-34"},{"v":9.31e-33,"d":"9.31E-33"},"full_name=heavy metal associated isoprenylated plant protein 27. Heavy metal transport/detoxification superfamily protein.","AT2G35820",null,354.42,2.7566,0.18128,15.206,{"v":3.21e-52,"d":"3.21E-52"},{"v":2.51e-50,"d":"2.51E-50"},"ureidoglycolate hydrolase.","AT5G07190","ATS3",204.17,-2.2278,0.1919,-11.609,{"v":3.7e-31,"d":"3.70E-31"},{"v":2.82e-29,"d":"2.82E-29"},"full_name=seed gene 3. embryo-specific protein 3. Gene is expressed preferentially in the embryo and encodes a unique protein of unknown function."]
["AT3G59780",null,246.5,-1.9456,0.15945,-12.202,{"v":3.04e-34,"d":"3.04E-34"},{"v":2.61e-32,"d":"2.61E-32"},"Rhodanese/Cell cycle control phosphatase superfamily protein.","AT2G34590",null,718.42,-1.3102,0.10828,-12.1,1.05E-33,{"v":8.71e-32,"d":"8.71E-32"},"Transketolase family protein.","AT1G52920","GPCR",215.24,2.2088,0.17989,12.279,{"v":1.18e-34,"d":"1.18E-34"},{"v":9.5e-33,"d":"9.50E-33"},"full_name=G protein coupled receptor. G protein coupled receptor. Encodes a plasma membrane%E2%80%93localized ABA receptor, which interacts with the G&#945;&#946;&#947; complex. It has been postulated that the binding of ABA to GCR2 results in the release of the G protein and dissociation of the heterotrimeric complex into G&#945; and the G&#946;&#947; dimer to activate downstream ABA effectors and to trigger the ABA responses.","AT5G48180","NSP5",4574.5,-2.2397,0.14761,-15.174,{"v":5.29e-52,"d":"5.29E-52"},{"v":4.12e-50,"d":"4.12E-50"},"full_name=nitrile specifier protein 5. nitrile specifier protein 5. Encodes a nitrile-specifier protein NSP5. NSP5 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation.","AT1G75240","HB33",151.24,2.7538,0.2378,11.58,{"v":5.19e-31,"d":"5.19E-31"},3.93E-29,"full_name=homeobox protein 33. homeobox protein 33. Encodes a zinc finger-homeodomain transcription factor ZHD5. Nuclear import and DNA binding of the ZHD5 transcription factor is modulated by a competitive peptide inhibitor MIF1 (AT1G74660)."]
["AT1G12010","ACO3",7507.9,-1.3027,0.10707,-12.167,{"v":4.67e-34,"d":"4.67E-34"},3.98E-32,"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. Encodes a protein that appears to have 1-amino-cyclopropane-1-carboxylic acid oxidase activity based on mutant analyses.","AT2G33590","CRL1",3042.3,1.0592,0.087672,12.081,{"v":1.33e-33,"d":"1.33E-33"},{"v":1.1E-31,"d":"1.10E-31"},"full_name=CCR(Cinnamoyl coA:NADP oxidoreductase)-like 1. NAD(P)-binding Rossmann-fold superfamily protein. Encodes a protein with homology to members of the dihydroflavonol-4-reductase (DFR) superfamily. The expression pattern of AtCRL1 indicates that CRL1 has a role in embryogenesis and seed germination. AtCRL1 is induced by ABA, drought and heat, and is highly expressed in seeds.","AT5G64550",null,179.32,-2.4076,0.19663,-12.244,{"v":1.8E-34,"d":"1.80E-34"},{"v":1.44e-32,"d":"1.44E-32"},"loricrin-like protein.","AT5G07990","TT7",337.73,-3.2006,0.211,-15.169,{"v":5.68e-52,"d":"5.68E-52"},{"v":4.4e-50,"d":"4.40E-50"},"full_name=TRANSPARENT TESTA 7. Cytochrome P450 superfamily protein. Required for flavonoid 3' hydroxylase activity. Enzyme abundance relative to CHS determines Quercetin/Kaempferol metabolite ratio.","AT1G60900","U2AF65B",709.93,-1.0846,0.093697,-11.576,{"v":5.46e-31,"d":"5.46E-31"},{"v":4.12e-29,"d":"4.12E-29"},"U2 snRNP auxilliary factor, large subunit, splicing factor."]
["AT2G35260","BCM1",262.38,-2.0526,0.16878,-12.162,{"v":4.96e-34,"d":"4.96E-34"},{"v":4.21e-32,"d":"4.21E-32"},"CAAX protease self-immunity protein.","AT4G01150","CURT1A",204.65,-2.0227,0.16779,-12.055,{"v":1.82e-33,"d":"1.82E-33"},{"v":1.49e-31,"d":"1.49E-31"},"CURVATURE THYLAKOID 1A-like protein.","AT5G13930","TT4",179.58,-3.0715,0.25142,-12.217,2.53E-34,{"v":2.02e-32,"d":"2.02E-32"},"full_name=TRANSPARENT TESTA 4. Chalcone and stilbene synthase family protein. Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism.","AT4G24110",null,995.43,-2.4452,0.16147,-15.143,8.41E-52,{"v":6.48e-50,"d":"6.48E-50"},"NADP-specific glutamate dehydrogenase.","AT1G78570","RHM1",223.7,1.9131,0.16558,11.554,{"v":7.05e-31,"d":"7.05E-31"},{"v":5.29e-29,"d":"5.29E-29"},"full_name=rhamnose biosynthesis 1. rhamnose biosynthesis 1. Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in <i>E. coli</i>."]
["AT2G27370","CASP3",99.958,3.716,0.30677,12.113,{"v":8.99e-34,"d":"8.99E-34"},{"v":7.6e-32,"d":"7.60E-32"},"full_name=Casparian strip membrane domain protein 3. Uncharacterized protein family (UPF0497).","AT1G51570","MCTP4",204.6,-2.1723,0.18026,-12.051,{"v":1.92e-33,"d":"1.92E-33"},{"v":1.57e-31,"d":"1.57E-31"},"Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein.","AT5G50600","HSD1",37198,1.4266,0.11691,12.203,{"v":2.99e-34,"d":"2.99E-34"},{"v":2.37e-32,"d":"2.37E-32"},"full_name=hydroxysteroid dehydrogenase 1. hydroxysteroid dehydrogenase 1. Encodes a hydroxysteroid dehydrogenase shown to act as a NADP+-dependent 11&beta;-,17&beta;-hydroxysteroid dehydrogenase/17&beta;-ketosteroid reductase called HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination. To date, the endogenous substrates of this enzyme are not known.","AT5G07500","PEI1",185.92,-3.8516,0.25442,-15.139,{"v":9e-52,"d":"9.00E-52"},{"v":6.9e-50,"d":"6.90E-50"},"Zinc finger C-x8-C-x5-C-x3-H type family protein. Encodes an embryo-specific zinc finger transcription factor required for heart-stage embryo formation.","AT5G07380",null,206.4,2.0608,0.17875,11.529,{"v":9.44e-31,"d":"9.44E-31"},{"v":7.05e-29,"d":"7.05E-29"},"hypothetical protein."]
["AT2G03200","ASPR1",114.31,-3.0803,0.25503,-12.078,1.38E-33,1.16E-31,"Eukaryotic aspartyl protease family protein.","AT1G09970","LRR XI-23",522.71,1.5355,0.12743,12.05,{"v":1.95e-33,"d":"1.95E-33"},1.59E-31,"Leucine-rich receptor-like protein kinase family protein. RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress.","AT5G50700","HSD1",37201,1.4267,0.11691,12.203,{"v":3E-34,"d":"3.00E-34"},{"v":2.37e-32,"d":"2.37E-32"},"full_name=hydroxysteroid dehydrogenase 1. hydroxysteroid dehydrogenase 1. Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination.","AT2G41230","ORS1",254.15,-2.5708,0.16987,-15.134,{"v":9.65e-52,"d":"9.65E-52"},{"v":7.37e-50,"d":"7.37E-50"},"full_name=ORGAN SIZE RELATED 1. ORGAN SIZE-like protein. Encodes an ER-localized plant hormone-responsive gene and appears to act redundantly with ARGOS and ARL during organ growth.","AT4G03420",null,351.15,1.5941,0.13874,11.489,1.49E-30,{"v":1.11e-28,"d":"1.11E-28"},"hypothetical protein (DUF789)."]
["AT3G29260",null,211.72,2.2521,0.18702,12.042,{"v":2.14e-33,"d":"2.14E-33"},1.79E-31,"NAD(P)-binding Rossmann-fold superfamily protein.","AT5G43810","AGO10",519.88,-1.4976,0.12476,-12.004,{"v":3.37e-33,"d":"3.37E-33"},{"v":2.73e-31,"d":"2.73E-31"},"full_name=ARGONAUTE 10. Stabilizer of iron transporter SufD / Polynucleotidyl transferase. Encodes Argonaute10, a member of the EIF2C (elongation initiation factor 2c)/ Argonaute class of proteins. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes, controls the relative organization of central zone and peripheral zone cells in meristems. Acts in embryonic provascular tissue potentiating WUSCHEL function during meristem development in the embryo. AGO10 specifically sequesters miR166/165 to regulate shoot apical meristem development.","AT5G54770","THI1",11366,-1.1921,0.097891,-12.178,{"v":4.08e-34,"d":"4.08E-34"},{"v":3.2e-32,"d":"3.20E-32"},"thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4). Encodes a thiamine biosynthetic gene that has a dual function in thiamine biosynthesis and mitochondrial DNA damage tolerance. It appears to be involved in producing the thiazole portion of thiamine (vitamin B1). A crystal structure of the protein reveals that it forms a 2-ring homo-octamer.","AT4G34200","EDA9",422.19,1.9577,0.12967,15.098,{"v":1.68e-51,"d":"1.68E-51"},1.28E-49,"full_name=embryo sac development arrest 9. D-3-phosphoglycerate dehydrogenase. Encodes a 3-phosphoglycerate dehydrogenase that is essential for embryo and pollen development.","AT1G09140","SR30",3141,-1.0095,0.087914,-11.483,{"v":1.61e-30,"d":"1.61E-30"},{"v":1.19e-28,"d":"1.19E-28"},"full_name=Serine/Arginine-Rich Protein Splicing Factor 30. SERINE-ARGININE PROTEIN 30. Encodes a serine-arginine rich RNA binding protein involved in regulation of splicing (including splicing of itself). Exists as 3 alternative spliced forms that are differentially expressed. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926."]
["AT1G49960",null,570.66,-1.6429,0.13654,-12.032,2.42E-33,2.01E-31,"Xanthine/uracil permease family protein.","AT4G33280",null,406.83,-1.5092,0.12576,-12.001,{"v":3.5e-33,"d":"3.50E-33"},2.82E-31,"AP2/B3-like transcriptional factor family protein.","AT1G22600",null,639.77,1.5645,0.12862,12.164,{"v":4.86e-34,"d":"4.86E-34"},{"v":3.8e-32,"d":"3.80E-32"},"Late embryogenesis abundant protein (LEA) family protein.","AT4G38540",null,254.21,2.7458,0.18209,15.079,2.23E-51,{"v":1.69e-49,"d":"1.69E-49"},"FAD/NAD(P)-binding oxidoreductase family protein.","AT1G64660","MGL",1496.6,-0.82901,0.072267,-11.471,{"v":1.83e-30,"d":"1.83E-30"},{"v":1.35e-28,"d":"1.35E-28"},"full_name=methionine gamma-lyase. methionine gamma-lyase. Encodes a functional methionine gamma-lyase, a cytosolic enzyme catalyzes the degradation of methionine into methanethiol, alpha-ketobutyrate and ammonia. The catabolism of excess methionine is important to methionine homeostasis."]
["AT1G20020","FNR2",304.81,-2.0055,0.16673,-12.029,{"v":2.51e-33,"d":"2.51E-33"},{"v":2.08e-31,"d":"2.08E-31"},"full_name=ferredoxin-NADP(+)-oxidoreductase 2. ferredoxin-NADP[+]-oxidoreductase 2. Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the stroma","AT4G28650","PXL2",180.03,-2.3108,0.19271,-11.991,{"v":3.96e-33,"d":"3.96E-33"},{"v":3.18e-31,"d":"3.18E-31"},"Leucine-rich repeat transmembrane protein kinase family protein. Encodes one of the two putative eLRR kinase closely related to PXY (At1g08590/PXL1 and At4g28650/PXL2). Insertion mutants in either pxl1 or pxl2 do not exhibit an obvious phenotype in the stem; double-mutant combinations of a Col allele, of pxy (pxy-3) with pxl1 and pxl2, generate a more severe vascular phenotype than pxy-3 alone, suggesting that these genes act synergistically with PXY in regulating vascular-tissue development in the stem.","AT5G04590","SIR",2781.4,1.6165,0.13291,12.162,{"v":4.95e-34,"d":"4.95E-34"},{"v":3.85e-32,"d":"3.85E-32"},"full_name=sulfite reductase. sulfite reductase. A.thaliana gene encoding sulfite reductase.","AT4G37520",null,152.57,-4.9013,0.3251,-15.077,{"v":2.31e-51,"d":"2.31E-51"},{"v":1.74e-49,"d":"1.74E-49"},"Peroxidase superfamily protein.","AT2G29380","HAI3",534.08,-1.3116,0.11452,-11.453,2.27E-30,1.66E-28,"full_name=highly ABA-induced PP2C gene 3. highly ABA-induced PP2C protein 3."]
["AT4G37930","SHM1",424.18,-1.6786,0.1401,-11.982,4.43E-33,{"v":3.65e-31,"d":"3.65E-31"},"full_name=serine transhydroxymethyltransferase 1. serine transhydroxymethyltransferase 1. Encodes a protein with mitochondrial serine hydroxymethyltransferase activity, which functions in the photorespiratory pathway, catalyzes the conversion of serine and tetrahydrofolate to glycine and 5,10-methylene tetrahydrofolate. Involved in controlling cell damage caused by abiotic stress, such as high light and salt and the hypersensitive defense response of plants.","AT4G02280","SUS3",5896.3,1.2073,0.10072,11.987,{"v":4.14e-33,"d":"4.14E-33"},{"v":3.31e-31,"d":"3.31E-31"},"full_name=sucrose synthase 3. sucrose synthase 3. Encodes a protein with sucrose synthase activity (SUS3). It appears to be important for sucrose metabolism in developing seeds, especially during the late maturation phase, about 18 days after flowering.","AT1G19490",null,177.55,2.4416,0.20115,12.138,{"v":6.64e-34,"d":"6.64E-34"},{"v":5.15e-32,"d":"5.15E-32"},"Basic-leucine zipper (bZIP) transcription factor family protein.","AT3G51120",null,1019.2,-1.5053,0.099855,-15.074,{"v":2.39e-51,"d":"2.39E-51"},1.79E-49,"zinc finger CCCH domain-containing protein 44.","AT2G02120","PDF2.1",10432,-0.66726,0.058265,-11.452,{"v":2.29e-30,"d":"2.29E-30"},1.67E-28,"Scorpion toxin-like knottin superfamily protein. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2."]
["AT5G07000","ST2B",405.59,1.6055,0.13478,11.912,1.02E-32,{"v":8.39e-31,"d":"8.39E-31"},"full_name=sulfotransferase 2B. sulfotransferase 2B. Encodes a member of the sulfotransferase family of proteins. Although it has 85% amino acid identity with ST2A (At5g07010), this protein is not able to transfer a sulfate group to 11- or 12-hydroxyjasmonic acid in vitro. It may be able to act on structurally related jasmonates.","AT5G56530",null,102.65,-3.2276,0.26981,-11.963,{"v":5.57e-33,"d":"5.57E-33"},{"v":4.44e-31,"d":"4.44E-31"},"tRNA-splicing ligase (DUF239).","AT3G23640","HGL1",805.49,-1.7103,0.14095,-12.134,{"v":7.01e-34,"d":"7.01E-34"},{"v":5.41e-32,"d":"5.41E-32"},"full_name=heteroglycan glucosidase 1. heteroglycan glucosidase 1.","AT4G24770","RBP31",1261.7,1.8322,0.12156,15.072,{"v":2.48e-51,"d":"2.48E-51"},1.85E-49,"full_name=31-kDa RNA binding protein. 31-kDa RNA binding protein. Encodes a chloroplast RNA-binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Required for editing and stability of specific chloroplast mRNAs.","AT4G15396","CYP702A6",2383.5,-0.93195,0.081513,-11.433,{"v":2.86e-30,"d":"2.86E-30"},{"v":2.08e-28,"d":"2.08E-28"},"full_name=cytochrome P450, family 702, subfamily A, polypeptide 6. cytochrome P450, family 702, subfamily A, polypeptide 6. a member of the cytochrome P450 family. molecular function unknown."]
["AT3G49260","iqd21",447.34,-2.2463,0.18904,-11.882,{"v":1.46e-32,"d":"1.46E-32"},{"v":1.2e-30,"d":"1.20E-30"},"full_name=IQ-domain 21. IQ-domain 21.","AT2G36145",null,206.97,-2.2439,0.18781,-11.948,{"v":6.68e-33,"d":"6.68E-33"},{"v":5.29e-31,"d":"5.29E-31"},"hypothetical protein.","AT1G52670","BLP1",146.52,-3.1688,0.26136,-12.124,{"v":7.86e-34,"d":"7.86E-34"},{"v":6.04e-32,"d":"6.04E-32"},"Single hybrid motif superfamily protein.","AT2G39570","ACR9",764.74,1.4606,0.096986,15.06,{"v":2.96e-51,"d":"2.96E-51"},2.19E-49,"full_name=ACT domain repeats 9. ACT domain-containing protein. Encodes a ACT domain-containing protein. The ACT domain, named after bacterial aspartate kinase, chorismate mutase and TyrA (prephenate dehydrogenase), is a regulatory domain that serves as an amino acid-binding site in feedback-regulated amino acid metabolic enzymes.","AT2G40170","GEA6",100300,-0.80415,0.070518,-11.404,{"v":4.01e-30,"d":"4.01E-30"},{"v":2.9e-28,"d":"2.90E-28"},"full_name=LATE EMBRYOGENESIS ABUNDANT 6. Stress induced protein. Encodes a group 1 LEA gene that is activated by direct binding of ABI5 to its promoter and is involved in response to ABA. Is required for normal seed development. Involved in regulating the timing of dessication tolerance and rate of water loss during seed maturation."]
["AT4G34138","UGT73B1",108.12,-3.1795,0.26794,-11.867,1.76E-32,1.44E-30,"full_name=UDP-glucosyl transferase 73B1. UDP-glucosyl transferase 73B1.","AT3G01100","HYP1",529.44,1.5048,0.1261,11.933,{"v":7.94e-33,"d":"7.94E-33"},{"v":6.26e-31,"d":"6.26E-31"},"full_name=hypothetical protein 1. hypothetical protein 1. unknown protein, has cDNAs and ESTs associated to it","AT1G01090","PDH-E1 ALPHA",763.74,-2.1701,0.17908,-12.118,{"v":8.45e-34,"d":"8.45E-34"},{"v":6.46e-32,"d":"6.46E-32"},"full_name=pyruvate dehydrogenase E1 alpha. pyruvate dehydrogenase E1 alpha. pyruvate dehydrogenase E1 alpha subunit","AT2G40170","GEA6",69569,1.4365,0.095499,15.042,{"v":3.91e-51,"d":"3.91E-51"},{"v":2.89e-49,"d":"2.89E-49"},"full_name=LATE EMBRYOGENESIS ABUNDANT 6. Stress induced protein. Encodes a group 1 LEA gene that is activated by direct binding of ABI5 to its promoter and is involved in response to ABA. Is required for normal seed development. Involved in regulating the timing of dessication tolerance and rate of water loss during seed maturation.","AT4G31830",null,1770.4,-0.85699,0.075238,-11.39,{"v":4.67e-30,"d":"4.67E-30"},{"v":3.36e-28,"d":"3.36E-28"},"transmembrane protein."]
["AT2G01340","At17.1",167.46,2.3704,0.20021,11.839,{"v":2.44e-32,"d":"2.44E-32"},1.98E-30,"plastid movement impaired protein. Encodes a protein whose expression is responsive to nematode infection.","AT5G65210","TGA1",295.29,1.7028,0.14297,11.91,1.04E-32,{"v":8.2e-31,"d":"8.20E-31"},"full_name=TGACG sequence-specific binding protein 1. bZIP transcription factor family protein. Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.","AT5G28910",null,406.54,-1.9555,0.1614,-12.116,{"v":8.69e-34,"d":"8.69E-34"},{"v":6.61e-32,"d":"6.61E-32"},"alpha-(1,6)-fucosyltransferase.","AT1G12130","FMOGS-OX6",831.88,1.8945,0.12597,15.04,{"v":4.03e-51,"d":"4.03E-51"},2.97E-49,"Flavin-binding monooxygenase family protein.","AT5G50700","HSD1",71032,-0.65513,0.057575,-11.379,{"v":5.35e-30,"d":"5.35E-30"},{"v":3.83e-28,"d":"3.83E-28"},"full_name=hydroxysteroid dehydrogenase 1. hydroxysteroid dehydrogenase 1. Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination."]
["AT2G36295",null,84.11,-4.4052,0.37214,-11.838,{"v":2.5e-32,"d":"2.50E-32"},{"v":2.01e-30,"d":"2.01E-30"},"hypothetical protein.","AT2G43800","FH2",92.367,-3.8467,0.3232,-11.902,1.16E-32,{"v":9.04e-31,"d":"9.04E-31"},"Actin-binding FH2 (formin homology 2) family protein.","AT2G25737",null,292.79,-2.1218,0.17535,-12.1,1.05E-33,7.96E-32,"Sulfite exporter TauE/SafE family protein.","AT3G11700","FLA18",193.63,-3.171,0.21147,-14.995,{"v":7.9e-51,"d":"7.90E-51"},{"v":5.79e-49,"d":"5.79E-49"},"full_name=FASCICLIN-like arabinogalactan protein 18 precursor. FASCICLIN-like arabinogalactan protein 18 precursor.","AT3G43520",null,863.99,-0.94774,0.083311,-11.376,5.51E-30,3.93E-28,"Transmembrane proteins 14C."]
["AT2G47200",null,191.89,-2.5229,0.21354,-11.814,{"v":3.29e-32,"d":"3.29E-32"},{"v":2.64e-30,"d":"2.64E-30"},"hypothetical protein.","AT3G50980","XERO1",917.65,1.6971,0.14294,11.872,{"v":1.65e-32,"d":"1.65E-32"},{"v":1.28e-30,"d":"1.28E-30"},"full_name=dehydrin xero 1. dehydrin xero 1.","AT4G11910","NYE2",1601.9,1.6736,0.13833,12.099,{"v":1.07e-33,"d":"1.07E-33"},{"v":8.06e-32,"d":"8.06E-32"},"STAY-GREEN-like protein. Acts antagonistically with SGR1 to balance chlorophyll catabolism in chloroplasts with the dismantling and remobilizing of other cellular components in senescing leaf cells.","AT4G14270",null,247.98,2.769,0.18469,14.992,{"v":8.22e-51,"d":"8.22E-51"},{"v":6E-49,"d":"6.00E-49"},"polyadenylate-binding protein interacting protein. Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins.","AT5G50600","HSD1",71027,-0.65504,0.057583,-11.376,{"v":5.53e-30,"d":"5.53E-30"},3.93E-28,"full_name=hydroxysteroid dehydrogenase 1. hydroxysteroid dehydrogenase 1. Encodes a hydroxysteroid dehydrogenase shown to act as a NADP+-dependent 11&beta;-,17&beta;-hydroxysteroid dehydrogenase/17&beta;-ketosteroid reductase called HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination. To date, the endogenous substrates of this enzyme are not known."]
["AT2G31980","CYS2",2761.8,-1.0824,0.091688,-11.805,{"v":3.66e-32,"d":"3.66E-32"},2.93E-30,"full_name=PHYTOCYSTATIN 2. PHYTOCYSTATIN 2.","AT5G22460",null,90.444,4.6219,0.38971,11.86,{"v":1.91e-32,"d":"1.91E-32"},{"v":1.48e-30,"d":"1.48E-30"},"alpha/beta-Hydrolases superfamily protein.","AT1G78500","PEN6",1875.5,-1.96,0.16247,-12.064,{"v":1.64e-33,"d":"1.64E-33"},1.23E-31,"Terpenoid cyclases family protein. Encodes a protein with pentacyclic triterpene synthase activity. In addition to the compounds lupeol, &#945;-amyrin and bauerenol, this enzyme was also shown to produce two <i>seco</i>-triterpenes: &#945;- and &#946;-<i>seco</i>-amyrin.","AT5G55135",null,1448.2,2.0476,0.13659,14.991,{"v":8.45e-51,"d":"8.45E-51"},{"v":6.14e-49,"d":"6.14E-49"},"hypothetical protein.","AT1G64190","PGD1",127.13,2.5239,0.22198,11.37,{"v":5.9e-30,"d":"5.90E-30"},{"v":4.17e-28,"d":"4.17E-28"},"6-phosphogluconate dehydrogenase family protein."]
["AT5G02160","FIP",232.31,-1.9199,0.16281,-11.792,{"v":4.27e-32,"d":"4.27E-32"},{"v":3.4e-30,"d":"3.40E-30"},"transmembrane protein.","AT5G33320","CUE1",813.36,-1.2803,0.10829,-11.823,{"v":2.98e-32,"d":"2.98E-32"},{"v":2.29e-30,"d":"2.29E-30"},"full_name=CAB UNDEREXPRESSED 1. Glucose-6-phosphate/phosphate translocator-like protein. Encodes a plastid inner envelope protein PPT (phosphoenolpyruvate/phosphate translocator) that catalyzes the transport of phosphoenolpyruvate and phosphate across the inner envelope membrane of plastids.","AT3G04200",null,171.17,-3.3119,0.27463,-12.059,1.73E-33,{"v":1.3E-31,"d":"1.30E-31"},"RmlC-like cupins superfamily protein.","AT5G40420","OLEO2",84709,-0.83533,0.055733,-14.988,{"v":8.79e-51,"d":"8.79E-51"},{"v":6.35e-49,"d":"6.35E-49"},"full_name=oleosin 2. oleosin 2. Encodes oleosin2, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.","AT3G26480",null,249.94,-1.9269,0.16962,-11.36,{"v":6.62e-30,"d":"6.62E-30"},{"v":4.65e-28,"d":"4.65E-28"},"Transducin family protein / WD-40 repeat family protein."]
["AT1G14520","MIOX1",425.95,1.5827,0.13425,11.789,4.43E-32,{"v":3.51e-30,"d":"3.51E-30"},"full_name=myo-inositol oxygenase 1. myo-inositol oxygenase 1. Encodes MIOX1. Belongs to myo-inositol oxygenase gene family.","AT3G05180",null,295.27,-1.7771,0.15046,-11.811,{"v":3.44e-32,"d":"3.44E-32"},{"v":2.64e-30,"d":"2.64E-30"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT5G22090","EAR1",257.62,-2.1825,0.181,-12.058,{"v":1.76e-33,"d":"1.76E-33"},1.31E-31,"FAF-like protein (DUF3049).","AT5G47330",null,188.76,-5.4646,0.36485,-14.978,1.03E-50,{"v":7.39e-49,"d":"7.39E-49"},"alpha/beta-Hydrolases superfamily protein.","AT5G55410",null,2793.3,-1.455,0.12808,-11.36,6.63E-30,{"v":4.65e-28,"d":"4.65E-28"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein."]
["AT2G14520",null,616.89,1.5079,0.12793,11.787,4.54E-32,{"v":3.58e-30,"d":"3.58E-30"},"CBS domain protein (DUF21).","AT2G02100","LCR69",291.38,-2.4454,0.20713,-11.806,3.63E-32,{"v":2.77e-30,"d":"2.77E-30"},"full_name=low-molecular-weight cysteine-rich 69. low-molecular-weight cysteine-rich 69. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","AT5G52570","BETA-OHASE 2",265.22,2.4166,0.20083,12.033,2.39E-33,{"v":1.77e-31,"d":"1.77E-31"},"full_name=beta-carotene hydroxylase 2. beta-carotene hydroxylase 2. Converts &#946;-carotene to zeaxanthin via cryptoxanthin.","AT3G10985","SAG20",178.57,-3.4468,0.23054,-14.951,1.53E-50,{"v":1.1e-48,"d":"1.10E-48"},"full_name=senescence associated gene 20. senescence associated gene 20. A senescence-associated gene whose expression is induced in response to treatment with Nep1, a fungal protein that causes necrosis.","AT1G27461","DRG",7685.4,-0.76613,0.067739,-11.31,1.17E-29,{"v":8.17e-28,"d":"8.17E-28"},"hypothetical protein."]
["AT1G17430",null,1582.8,1.2098,0.10296,11.75,{"v":7.04e-32,"d":"7.04E-32"},{"v":5.53e-30,"d":"5.53E-30"},"alpha/beta-Hydrolases superfamily protein.","AT1G21560",null,365.09,-1.5714,0.13311,-11.805,{"v":3.67e-32,"d":"3.67E-32"},2.79E-30,"hypothetical protein.","AT3G46660","UGT76E12",153.98,2.5855,0.21542,12.002,3.45E-33,{"v":2.55e-31,"d":"2.55E-31"},"full_name=UDP-glucosyl transferase 76E12. UDP-glucosyl transferase 76E12.","AT1G47128","RD21A",573.2,-4.029,0.26954,-14.947,{"v":1.62e-50,"d":"1.62E-50"},1.15E-48,"full_name=responsive to dehydration 21A. Granulin repeat cysteine protease family protein. cysteine proteinase precursor-like protein/ dehydration stress-responsive gene (RD21). Has been shown to have peptide ligase activity and protease activity in vitro. RD21 is involved in immunity to the necrotrophic fungal pathogen Botrytis cinerea.","AT5G05600","JOX2",203.34,-1.905,0.16895,-11.276,{"v":1.72e-29,"d":"1.72E-29"},{"v":1.19e-27,"d":"1.19E-27"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein."]
["AT3G14990","DJ1A",839.93,-1.3808,0.1177,-11.731,{"v":8.83e-32,"d":"8.83E-32"},{"v":6.91e-30,"d":"6.91E-30"},"full_name=DJ-1 homolog A. Class I glutamine amidotransferase-like superfamily protein. Encodes a homolog of animal DJ-1 superfamily protein. In the A. thaliana genome, three genes encoding close homologs of human DJ-1 were identified AT3G14990 (DJ1A), AT1G53280 (DJ1B) and AT4G34020 (DJ1C). Among the three homologs, DJ1C is essential for chloroplast development and viability. It exhibits glyoxalase activity towards glyoxal and methylglyoxal.","AT1G70985",null,540.82,1.5495,0.13193,11.745,{"v":7.5e-32,"d":"7.50E-32"},{"v":5.68e-30,"d":"5.68E-30"},"hydroxyproline-rich glycoprotein family protein.","AT4G06746","RAP2.9",556.3,2.2373,0.18653,11.994,{"v":3.8e-33,"d":"3.80E-33"},2.79E-31,"full_name=related to AP2 9. related to AP2 9. encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.9). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1 and RAP2.10.","AT1G19180","JAZ1",538.53,-3.2608,0.21865,-14.913,{"v":2.71e-50,"d":"2.71E-50"},{"v":1.93e-48,"d":"1.93E-48"},"full_name=jasmonate-zim-domain protein 1. jasmonate-zim-domain protein 1. JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.","AT1G10970","ZIP4",257.94,-1.7793,0.1578,-11.276,{"v":1.73e-29,"d":"1.73E-29"},{"v":1.19e-27,"d":"1.19E-27"},"full_name=zinc transporter 4 precursor. zinc transporter. A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root and shoot. Expression is regulated by copper, but response to copper deficiency is detected only after three weeks of deficiency."]
["AT3G48270","CYP71A26",520.59,2.083,0.17779,11.716,1.06E-31,{"v":8.24e-30,"d":"8.24E-30"},"full_name=cytochrome P450, family 71, subfamily A, polypeptide 26. cytochrome P450, family 71, subfamily A, polypeptide 26. putative cytochrome P450","AT1G21000","PLATZ1",327.39,2.4079,0.20531,11.728,{"v":9.15e-32,"d":"9.15E-32"},{"v":6.9e-30,"d":"6.90E-30"},"PLATZ transcription factor family protein.","AT1G19835","TCS1",679.1,-1.8469,0.15434,-11.966,{"v":5.33e-33,"d":"5.33E-33"},{"v":3.9e-31,"d":"3.90E-31"},"filament-like protein (DUF869).","AT2G40370","LAC5",375.65,-4.0503,0.27161,-14.913,{"v":2.73e-50,"d":"2.73E-50"},{"v":1.93e-48,"d":"1.93E-48"},"full_name=laccase 5. laccase 5. putative laccase, a member of laccase family of genes (17 members in Arabidopsis).","AT2G29980","FAD3",191.62,-3.3022,0.29296,-11.272,{"v":1.81e-29,"d":"1.81E-29"},1.25E-27,"full_name=fatty acid desaturase 3. fatty acid desaturase 3. Endoplasmic reticulum enzyme responsible for the synthesis of 18:3 fatty acids from phospholipids. Uses cytochrome b5 as electron donor."]
["AT4G00360","CYP86A2",870.5,-1.349,0.11553,-11.676,{"v":1.68e-31,"d":"1.68E-31"},{"v":1.3e-29,"d":"1.30E-29"},"full_name=cytochrome P450, family 86, subfamily A, polypeptide 2. cytochrome P450, family 86, subfamily A, polypeptide 2. Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems.","AT2G32990","GH9B8",157.76,-3.0174,0.25741,-11.722,{"v":9.81e-32,"d":"9.81E-32"},{"v":7.37e-30,"d":"7.37E-30"},"full_name=glycosyl hydrolase 9B8. glycosyl hydrolase 9B8.","AT1G62480",null,437.42,-2.3059,0.19273,-11.964,5.49E-33,{"v":4e-31,"d":"4.00E-31"},"Vacuolar calcium-binding protein-like protein.","AT5G07010","ST2A",1378.9,-1.7783,0.11938,-14.896,{"v":3.51e-50,"d":"3.51E-50"},2.47E-48,"full_name=sulfotransferase 2A. sulfotransferase 2A. Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).","AT3G58680","MBF1B",4604.3,-0.79688,0.070816,-11.253,{"v":2.24e-29,"d":"2.24E-29"},1.54E-27,"full_name=multiprotein bridging factor 1B. multiprotein bridging factor 1B. One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated."]
["AT5G22470","ADP-RIBOSE",5755.8,1.1054,0.094913,11.647,{"v":2.38e-31,"d":"2.38E-31"},{"v":1.84e-29,"d":"1.84E-29"},"poly ADP-ribose polymerase 3.","AT1G23800","ALDH2B7",217.91,1.9387,0.16541,11.721,{"v":9.96e-32,"d":"9.96E-32"},{"v":7.45e-30,"d":"7.45E-30"},"full_name=aldehyde dehydrogenase 2B7. aldehyde dehydrogenase 2B7. Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product.","AT3G03341",null,1035.7,2.2006,0.184,11.96,{"v":5.77e-33,"d":"5.77E-33"},{"v":4.18e-31,"d":"4.18E-31"},"cold-regulated protein.","AT1G08340",null,151.41,-3.9297,0.26383,-14.895,{"v":3.55e-50,"d":"3.55E-50"},2.49E-48,"Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein.","AT5G19860",null,794.33,-1.1427,0.10155,-11.252,{"v":2.26e-29,"d":"2.26E-29"},1.54E-27,"transmembrane protein, putative (Protein of unknown function, DUF538)."]
["AT2G43390",null,88.047,-3.8044,0.3269,-11.638,{"v":2.64e-31,"d":"2.64E-31"},{"v":2.03e-29,"d":"2.03E-29"},"hypothetical protein.","AT3G55800","SBPASE",226.44,-1.9276,0.16462,-11.709,{"v":1.14e-31,"d":"1.14E-31"},{"v":8.52e-30,"d":"8.52E-30"},"full_name=sedoheptulose-bisphosphatase. sedoheptulose-bisphosphatase. Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type.","AT4G01900","GLB1",281.03,-1.9671,0.16452,-11.956,{"v":6.01e-33,"d":"6.01E-33"},{"v":4.32e-31,"d":"4.32E-31"},"full_name=GLNB1 homolog. nitrogen regulatory P-II-like protein. encodes a PII protein that may function as part of a signal transduction network involved in perceiving the status of carbon and organic nitrogen. Forms a protein complex with N-acetylglutamate kinase and regulates the kinase activity by relieving the feedback inhibition of the kinase by arginine. Regulates acetyl-CoA carboxylase activity.","AT2G46950","CYP709B2",158.22,-4.1663,0.27974,-14.894,{"v":3.63e-50,"d":"3.63E-50"},{"v":2.54e-48,"d":"2.54E-48"},"full_name=cytochrome P450, family 709, subfamily B, polypeptide 2. cytochrome P450, family 709, subfamily B, polypeptide 2. member of CYP709B","AT5G01670",null,36426,-0.88576,0.078818,-11.238,{"v":2.65e-29,"d":"2.65E-29"},{"v":1.8e-27,"d":"1.80E-27"},"NAD(P)-linked oxidoreductase superfamily protein."]
["AT2G40160","TBL30",81.134,-3.9768,0.34182,-11.634,{"v":2.76e-31,"d":"2.76E-31"},{"v":2.11e-29,"d":"2.11E-29"},"trichome birefringence-like protein (DUF828). Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT1G13170","ORP1D",142.77,-2.5067,0.21469,-11.676,1.69E-31,1.25E-29,"full_name=OSBP(oxysterol binding protein)-related protein 1D. OSBP(oxysterol binding protein)-related protein 1D.","AT5G42030","ABIL4",205.14,-2.4726,0.2068,-11.956,{"v":6.01e-33,"d":"6.01E-33"},{"v":4.32e-31,"d":"4.32E-31"},"full_name=ABL interactor-like protein 4. ABL interactor-like protein 4.","AT4G30440","GAE1",334.47,-2.0329,0.13667,-14.874,4.87E-50,{"v":3.38e-48,"d":"3.38E-48"},"full_name=UDP-D-glucuronate 4-epimerase 1. UDP-D-glucuronate 4-epimerase 1. UDP-D-glucuronate 4-epimerase","AT1G78420","LARGE IN CHINESE",1424.4,0.84324,0.07508,11.231,2.87E-29,1.94E-27,"RING/U-box superfamily protein."]
["AT4G34050","CCoAOMT1",6396.7,-1.2164,0.10468,-11.621,3.24E-31,{"v":2.47e-29,"d":"2.47E-29"},"full_name=caffeoyl coenzyme A O-methyltransferase 1. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT5G54270","LHCB3",104.33,-5.9101,0.50642,-11.671,{"v":1.8E-31,"d":"1.80E-31"},{"v":1.33e-29,"d":"1.33E-29"},"full_name=light-harvesting chlorophyll B-binding protein 3. light-harvesting chlorophyll B-binding protein 3. Lhcb3 protein is a component of the main light harvesting chlorophyll a/b-protein complex of Photosystem II (LHC II).","AT4G25340","FKBP53",449.53,2.0077,0.1681,11.943,{"v":7.03e-33,"d":"7.03E-33"},{"v":5.03e-31,"d":"5.03E-31"},"full_name=FK506 BINDING PROTEIN 53. FK506 BINDING PROTEIN 53. Encodes a member of the FKBP-type immunophilin family that functions as a histone chaparone. Binds to 18S rDNA and represses its expression.","AT5G20830","SUS1",194.91,-4.8329,0.32499,-14.871,{"v":5.1e-50,"d":"5.10E-50"},{"v":3.53e-48,"d":"3.53E-48"},"full_name=sucrose synthase 1. sucrose synthase 1. Encodes a protein with sucrose synthase activity (SUS1).","AT5G07010","ST2A",525.53,-1.5457,0.13781,-11.216,3.39E-29,2.29E-27,"full_name=sulfotransferase 2A. sulfotransferase 2A. Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor)."]
["AT1G20010","TUB5",107.89,-3.1736,0.2746,-11.557,{"v":6.79e-31,"d":"6.79E-31"},{"v":5.15e-29,"d":"5.15E-29"},"full_name=tubulin beta-5 chain. tubulin beta-5 chain. beta tubulin","AT1G21750","PDIL1-1",3468.3,-1.1495,0.098506,-11.669,1.84E-31,{"v":1.35e-29,"d":"1.35E-29"},"full_name=PDI-like 1-1. PDI-like 1-1. Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.","AT3G57020",null,5472.3,1.3253,0.11106,11.934,{"v":7.9e-33,"d":"7.90E-33"},{"v":5.63e-31,"d":"5.63E-31"},"Calcium-dependent phosphotriesterase superfamily protein.","AT1G08630","THA1",281.1,-2.8099,0.18899,-14.868,{"v":5.32e-50,"d":"5.32E-50"},{"v":3.66e-48,"d":"3.66E-48"},"full_name=threonine aldolase 1. threonine aldolase 1. Encodes a threonine aldolase, involved in threonine degradation to glycine. Primarily expressed in seeds and seedlings.","AT2G32150",null,331.37,-1.5962,0.14236,-11.213,3.53E-29,2.37E-27,"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein."]
["AT1G04360","ATL1",124.63,-2.7948,0.24225,-11.537,{"v":8.59e-31,"d":"8.59E-31"},{"v":6.49e-29,"d":"6.49E-29"},"RING/U-box superfamily protein.","AT5G64040","PSAN",101.77,-3.3503,0.28721,-11.665,{"v":1.92e-31,"d":"1.92E-31"},{"v":1.41e-29,"d":"1.41E-29"},"photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN). Encodes the only subunit of photosystem I located entirely in the thylakoid lumen. May be involved in the interaction between plastocyanin and the photosystem I complex. Phosphorylation of this protein is dependent on calcium.","AT1G31670",null,457.76,-2.4089,0.202,-11.925,{"v":8.76e-33,"d":"8.76E-33"},{"v":6.22e-31,"d":"6.22E-31"},"Copper amine oxidase family protein.","AT5G66100","LARP1b",306.77,-2.0444,0.13774,-14.842,{"v":7.81e-50,"d":"7.81E-50"},{"v":5.36e-48,"d":"5.36E-48"},"full_name=La related protein 1b. winged-helix DNA-binding transcription factor family protein. Encodes a LAM domain containing protein that is involved in leaf senescence.","AT1G79245",null,2491.4,0.99999,0.089208,11.21,{"v":3.66e-29,"d":"3.66E-29"},{"v":2.45e-27,"d":"2.45E-27"},"pseudogene. pseudogene of unknown protein"]
["AT1G72230",null,320.12,-1.6383,0.14213,-11.526,{"v":9.71e-31,"d":"9.71E-31"},{"v":7.31e-29,"d":"7.31E-29"},"Cupredoxin superfamily protein.","AT2G28420","GLYI8",812.18,1.5951,0.13677,11.663,1.98E-31,{"v":1.44e-29,"d":"1.44E-29"},"full_name=glyoxylase I 8. Lactoylglutathione lyase / glyoxalase I family protein.","AT4G34260","FUC95A",112.79,-3.2912,0.27637,-11.909,{"v":1.07e-32,"d":"1.07E-32"},{"v":7.55e-31,"d":"7.55E-31"},"1,2-alpha-L-fucosidase.","AT1G73220","2024-10-01",321.21,-4.4837,0.3028,-14.807,{"v":1.31e-49,"d":"1.31E-49"},{"v":8.96e-48,"d":"8.96E-48"},"full_name=organic cation/carnitine transporter1. organic cation/carnitine transporter1.","AT5G64250",null,1247.8,-0.89386,0.079751,-11.208,{"v":3.72e-29,"d":"3.72E-29"},{"v":2.48e-27,"d":"2.48E-27"},"Aldolase-type TIM barrel family protein."]
["AT2G37770","ChlAKR",110.97,2.7396,0.23772,11.525,{"v":9.92e-31,"d":"9.92E-31"},{"v":7.44e-29,"d":"7.44E-29"},"full_name=Chloroplastic aldo-keto reductase. NAD(P)-linked oxidoreductase superfamily protein. Encodes an NADPH-dependent aldo-keto reductase that can act on a wide variety of substrates in vitro including saturated and unsaturated aldehydes, steroids, and sugars. GFP-tagged AKR4C9 localizes to the chloroplast where it may play a role in detoxifying reactive carbonyl compounds that threaten to impair the photosynthetic process. Transcript levels for this gene are up-regulated in response to cold, salt, and drought stress.","AT5G09590","MTHSC70-2",741.67,1.3865,0.11893,11.657,{"v":2.1e-31,"d":"2.10E-31"},{"v":1.53e-29,"d":"1.53E-29"},"full_name=mitochondrial HSO70 2. mitochondrial HSO70 2. heat shock protein 70 (Hsc70-5); nuclear","AT1G07080",null,1366.2,1.2676,0.10648,11.904,{"v":1.13e-32,"d":"1.13E-32"},{"v":7.92e-31,"d":"7.92E-31"},"Thioredoxin superfamily protein.","AT2G34790","MEE23",252.03,-3.2678,0.2209,-14.793,{"v":1.63e-49,"d":"1.63E-49"},{"v":1.11e-47,"d":"1.11E-47"},"full_name=MATERNAL EFFECT EMBRYO ARREST 23. FAD-binding Berberine family protein.","AT2G36770",null,363.53,1.5331,0.13683,11.205,{"v":3.86e-29,"d":"3.86E-29"},{"v":2.56e-27,"d":"2.56E-27"},"UDP-Glycosyltransferase superfamily protein."]
["AT5G55230","MAP65-1",528.1,-1.597,0.13877,-11.508,{"v":1.2e-30,"d":"1.20E-30"},{"v":8.97e-29,"d":"8.97E-29"},"full_name=microtubule-associated proteins 65-1. microtubule-associated proteins 65-1. Binds and bundles microtubules. Plays a role in stabilizing anti-parallel microtubules in the central spindle at anaphase to early cytokinesis but is not essential at the midline of the phragmoplast at later stages. The timing with which the MAP65-1 was targeted to the spindle appears to be regulated by a phosphorylation sensitive switch. Enhances microtubule polymerization, promotes nucleation and stabilizes microtubules against cold treatment and dilution.","AT1G30120","PDH-E1 BETA",978.9,-1.1799,0.10124,-11.655,{"v":2.17e-31,"d":"2.17E-31"},{"v":1.57e-29,"d":"1.57E-29"},"full_name=pyruvate dehydrogenase E1 beta. pyruvate dehydrogenase E1 beta. Encodes a putative plastid pyruvate dehydrogenase E1 beta subunit that is distinct from the mitochondrial pyruvate dehydrogenase E1 beta subunit.","AT1G09960","SUT4",315.73,-1.8425,0.15512,-11.878,{"v":1.54e-32,"d":"1.54E-32"},{"v":1.08e-30,"d":"1.08E-30"},"full_name=sucrose transporter 4. sucrose transporter 4. low affinity (10mM) sucrose transporter in sieve elements (phloem)","AT2G05910",null,152.38,-4.9052,0.33218,-14.767,{"v":2.4e-49,"d":"2.40E-49"},{"v":1.63e-47,"d":"1.63E-47"},"LURP-one-like protein (DUF567).","AT4G19960","KUP9",911.47,1.1227,0.10051,11.17,{"v":5.72e-29,"d":"5.72E-29"},{"v":3.78e-27,"d":"3.78E-27"},"full_name=K+ uptake permease 9. K+ uptake permease 9. Encodes a potassium ion transmembrane transporter. Also mediates cesium uptake when expressed in E. coli."]
["AT1G32060","PRK",1833.6,-1.501,0.13121,-11.44,{"v":2.64e-30,"d":"2.64E-30"},{"v":1.97e-28,"d":"1.97E-28"},"full_name=phosphoribulokinase. phosphoribulokinase.","AT2G40100","LHCB4.3",411.18,-1.5555,0.13362,-11.642,{"v":2.53e-31,"d":"2.53E-31"},{"v":1.83e-29,"d":"1.83E-29"},"full_name=light harvesting complex photosystem II. light harvesting complex photosystem II. Lhcb4:3 protein (Lhcb4.3, light harvesting complex of photosystem II","AT1G47970",null,988.09,1.3801,0.11626,11.87,1.69E-32,{"v":1.18e-30,"d":"1.18E-30"},"nucleolin.","AT5G62190","PRH75",1978.6,1.2061,0.081806,14.744,{"v":3.39e-49,"d":"3.39E-49"},{"v":2.29e-47,"d":"2.29E-47"},"DEAD box RNA helicase (PRH75). DEAD/DEAH box RNA helicase PRH75","AT1G07420","SMO2-1",340.29,-1.4363,0.1292,-11.117,{"v":1.04e-28,"d":"1.04E-28"},{"v":6.84e-27,"d":"6.84E-27"},"full_name=sterol 4-alpha-methyl-oxidase 2-1. sterol 4-alpha-methyl-oxidase 2-1. Arabidopsis thaliana sterol 4-alpha-methyl-oxidase mRNA"]
["AT5G06760","LEA4-5",663.92,1.7169,0.15059,11.401,{"v":4.13e-30,"d":"4.13E-30"},{"v":3.06e-28,"d":"3.06E-28"},"full_name=Late Embryogenesis Abundant 4-5. Late Embryogenesis Abundant 4-5. Encodes LEA4-5, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment. Most of the diverse set of LEA proteins can be grouped according to properties such as high hydrophilicity and high content of glycine or other small amino acids in what has been termed hydrophilins. LEA4-5 protects enzyme activities from the adverse effects induced by freeze-thaw cycles in vitro.","AT5G07200","GA20OX3",3134.9,-1.3498,0.11602,-11.634,{"v":2.76e-31,"d":"2.76E-31"},{"v":1.98e-29,"d":"1.98E-29"},"full_name=gibberellin 20-oxidase 3. gibberellin 20-oxidase 3. encodes a gibberellin 20-oxidase.","AT2G02780",null,765.07,-1.9824,0.1671,-11.864,1.83E-32,1.27E-30,"Leucine-rich repeat protein kinase family protein.","AT3G53620","PPa4",147.31,-3.387,0.22993,-14.73,{"v":4.11e-49,"d":"4.11E-49"},{"v":2.76e-47,"d":"2.76E-47"},"full_name=pyrophosphorylase 4. pyrophosphorylase 4. Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.","AT2G23320","WRKY15",1509.7,0.97262,0.087494,11.116,{"v":1.04e-28,"d":"1.04E-28"},{"v":6.84e-27,"d":"6.84E-27"},"full_name=WRKY DNA-binding protein 15. WRKY DNA-binding protein 15. Encodes WRKY DNA-binding protein 15 (WRKY15)."]
["AT3G15260",null,2587.4,1.0161,0.08927,11.382,5.11E-30,3.77E-28,"Protein phosphatase 2C family protein.","AT5G66780",null,2998.9,1.4534,0.12503,11.624,{"v":3.11e-31,"d":"3.11E-31"},{"v":2.22e-29,"d":"2.22E-29"},"late embryogenesis abundant protein.","AT5G14610","RH46",125.08,-2.9026,0.24511,-11.842,{"v":2.36e-32,"d":"2.36E-32"},{"v":1.64e-30,"d":"1.64E-30"},"DEAD box RNA helicase family protein.","AT5G10770",null,206.88,-2.7189,0.18467,-14.723,{"v":4.56e-49,"d":"4.56E-49"},3.05E-47,"Eukaryotic aspartyl protease family protein.","AT4G14716","ARD1",982.89,-0.9502,0.085487,-11.115,1.06E-28,{"v":6.91e-27,"d":"6.91E-27"},"full_name=acireductone dioxygenase 1. acireductone dioxygenase 1. Encodes an acireductone dioxygenase that is activated by interaction with a heterotrimeric G protein beta subunit. It is a metalloenzyme and is likely involved in the methionine salvage pathway."]
["AT4G29020",null,420.16,1.802,0.15852,11.367,{"v":6.09e-30,"d":"6.09E-30"},4.46E-28,"glycine-rich protein.","AT5G05320",null,82.906,3.7988,0.327,11.617,3.38E-31,{"v":2.4e-29,"d":"2.40E-29"},"FAD/NAD(P)-binding oxidoreductase family protein.","AT1G32560","AtLEA4-1",7733.3,1.7885,0.15127,11.823,{"v":2.96e-32,"d":"2.96E-32"},{"v":2.04e-30,"d":"2.04E-30"},"full_name=Late Embryogenesis Abundant 4-1. Late embryogenesis abundant protein, group 1 protein. Encodes LEA4-1, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment.","AT5G40690",null,209.16,-3.3914,0.23081,-14.693,{"v":7.1e-49,"d":"7.10E-49"},{"v":4.73e-47,"d":"4.73E-47"},"histone-lysine N-methyltransferase trithorax-like protein.","AT4G16130","ARA1",920.76,0.9665,0.086977,11.112,1.09E-28,{"v":7.11e-27,"d":"7.11E-27"},"full_name=arabinose kinase. arabinose kinase. Similar to galactokinase."]
["AT5G64530","XND1",142.91,-3.0573,0.26896,-11.367,{"v":6.1e-30,"d":"6.10E-30"},4.46E-28,"full_name=xylem NAC domain 1. xylem NAC domain 1.","AT2G05710","ACO3",2047.4,1.0166,0.087516,11.616,{"v":3.43e-31,"d":"3.43E-31"},{"v":2.43e-29,"d":"2.43E-29"},"full_name=aconitase 3. aconitase 3. Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT4G35090","CAT2",1324.3,1.2683,0.10764,11.783,{"v":4.76e-32,"d":"4.76E-32"},{"v":3.27e-30,"d":"3.27E-30"},"full_name=catalase 2. catalase 2. Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2).","AT3G61220","SDR1",147.52,-3.3704,0.22956,-14.682,{"v":8.37e-49,"d":"8.37E-49"},{"v":5.55e-47,"d":"5.55E-47"},"full_name=short-chain dehydrogenase/reductase 1. NAD(P)-binding Rossmann-fold superfamily protein. CytADR/SDR1 is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. It can also act on menthone and neomenthol in vitro, but these do not represent likely endogenous activities of this enzyme in planta. GFP-tagged CytADR appears to localize to the cytosol where it likely plays a role in detoxifying reactive carbonyls. sdr1 mutants have altered responses to pathogens.","AT1G16850",null,2725.7,-0.97506,0.087763,-11.11,{"v":1.12e-28,"d":"1.12E-28"},{"v":7.25e-27,"d":"7.25E-27"},"transmembrane protein."]
["AT5G58770","cPT4",85.388,3.3863,0.29801,11.363,{"v":6.37e-30,"d":"6.37E-30"},{"v":4.64e-28,"d":"4.64E-28"},"full_name=cis-prenyltransferase 4. Undecaprenyl pyrophosphate synthetase family protein.","AT3G19800","DUF177B",163.06,-2.3525,0.20254,-11.615,3.46E-31,{"v":2.44e-29,"d":"2.44E-29"},"E3 ubiquitin-protein ligase, putative (DUF177).","AT4G09820","TT8",145.17,-2.8566,0.24252,-11.779,{"v":5.04e-32,"d":"5.04E-32"},{"v":3.45e-30,"d":"3.45E-30"},"full_name=TRANSPARENT TESTA 8. basic helix-loop-helix (bHLH) DNA-binding superfamily protein. TT8 is a regulation factor that acts in a concerted action with TT1, PAP1 and TTG1 on the regulation of flavonoid pathways, namely proanthocyanidin and anthocyanin biosynthesis. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Also important for important for marginal trichome development. It binds the promoter of both AT3G26790 and AT1G28300.","AT1G06110","SKIP16",1101.4,1.4306,0.097907,14.612,{"v":2.35e-48,"d":"2.35E-48"},1.55E-46,"full_name=SKP1/ASK-interacting protein 16. SKP1/ASK-interacting protein 16.","AT3G21380",null,22930,-1.0251,0.09233,-11.102,1.22E-28,{"v":7.89e-27,"d":"7.89E-27"},"Mannose-binding lectin superfamily protein."]
["AT5G59310","LTP4",300.66,-1.7645,0.15584,-11.322,{"v":1.02e-29,"d":"1.02E-29"},{"v":7.37e-28,"d":"7.37E-28"},"full_name=lipid transfer protein 4. lipid transfer protein 4. Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The mRNA is present in flowers and siliques, and is strongly up-regulated by abscisic acid. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.","AT5G48360","FH9",99.554,-3.211,0.27693,-11.595,{"v":4.38e-31,"d":"4.38E-31"},{"v":3.08e-29,"d":"3.08E-29"},"Actin-binding FH2 (formin homology 2) family protein.","AT5G22740","CSLA02",167.64,-3.432,0.29144,-11.776,{"v":5.2e-32,"d":"5.20E-32"},3.54E-30,"full_name=cellulose synthase-like A02. cellulose synthase-like A02. encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein","AT3G15510","NAC2",227.26,-4.0641,0.27877,-14.579,{"v":3.84e-48,"d":"3.84E-48"},{"v":2.53e-46,"d":"2.53E-46"},"full_name=NAC domain containing protein 2. NAC domain containing protein 2. Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2.","AT1G28360","ERF12",725.09,1.1763,0.10609,11.088,{"v":1.44e-28,"d":"1.44E-28"},{"v":9.22e-27,"d":"9.22E-27"},"full_name=ERF domain protein 12. ERF domain protein 12. encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ERF12). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole."]
["AT3G23175",null,196.12,2.7703,0.2465,11.239,{"v":2.63e-29,"d":"2.63E-29"},{"v":1.9E-27,"d":"1.90E-27"},"HR-like lesion-inducing protein-like protein.","AT3G19920",null,2112.9,1.0397,0.08997,11.556,{"v":6.92e-31,"d":"6.92E-31"},{"v":4.84e-29,"d":"4.84E-29"},"BTB/POZ domain protein.","AT2G19310","HSP18.5",258.87,2.4038,0.20425,11.769,{"v":5.619999999999999e-32,"d":"5.62E-32"},{"v":3.81e-30,"d":"3.81E-30"},"HSP20-like chaperones superfamily protein.","AT4G02520","GSTF2",3499.2,2.9639,0.20371,14.55,{"v":5.87e-48,"d":"5.87E-48"},3.85E-46,"full_name=glutathione S-transferase PHI 2. glutathione S-transferase PHI 2. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.","AT2G23120",null,1253.4,-1.4753,0.13336,-11.062,1.91E-28,1.22E-26,"Late embryogenesis abundant protein, group 6."]
["AT5G26850",null,344.8,-1.8085,0.16107,-11.228,{"v":2.96e-29,"d":"2.96E-29"},{"v":2.13e-27,"d":"2.13E-27"},"Uncharacterized protein.","AT3G03770",null,2208.7,-1.0023,0.087002,-11.521,1.04E-30,7.22E-29,"Leucine-rich repeat protein kinase family protein.","AT5G65550",null,1557,1.5852,0.13535,11.712,{"v":1.11e-31,"d":"1.11E-31"},{"v":7.49e-30,"d":"7.49E-30"},"UDP-Glycosyltransferase superfamily protein.","AT1G63180","UGE3",523.13,1.9765,0.13592,14.541,6.62E-48,{"v":4.32e-46,"d":"4.32E-46"},"full_name=UDP-D-glucose/UDP-D-galactose 4-epimerase 3. UDP-D-glucose/UDP-D-galactose 4-epimerase 3. Encodes a protein with UDP-D-glucose 4-epimerase activity. Involved in pollen development.","AT5G14780","FDH",4646.2,-0.96129,0.086901,-11.062,{"v":1.92e-28,"d":"1.92E-28"},1.22E-26,"full_name=formate dehydrogenase. formate dehydrogenase. Encodes a NAD-dependent formate dehydrogenase."]
["AT4G26790",null,86.608,-3.2024,0.28527,-11.226,{"v":3.04e-29,"d":"3.04E-29"},{"v":2.18e-27,"d":"2.18E-27"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT1G23750",null,117.09,-2.6421,0.22969,-11.503,{"v":1.28e-30,"d":"1.28E-30"},{"v":8.87e-29,"d":"8.87E-29"},"Nucleic acid-binding, OB-fold-like protein.","AT4G13840","CER26",346.76,-3.0554,0.26098,-11.708,1.16E-31,{"v":7.84e-30,"d":"7.84E-30"},"HXXXD-type acyl-transferase family protein.","AT4G27450",null,785.82,2.7935,0.19305,14.471,1.86E-47,1.21E-45,"aluminum induced protein with YGL and LRDR motifs.","AT3G52340","SPP2",603.34,-1.1152,0.10084,-11.06,{"v":1.97e-28,"d":"1.97E-28"},1.25E-26,"full_name=sucrose-6F-phosphate phosphohydrolase 2. sucrose-6F-phosphate phosphohydrolase 2. sucrose-phosphatase (SPP2)"]
["AT1G16850",null,222.96,2.3402,0.20861,11.218,{"v":3.32e-29,"d":"3.32E-29"},2.37E-27,"transmembrane protein.","AT5G62700","TUB3",735.9,-1.2882,0.11254,-11.447,{"v":2.45e-30,"d":"2.45E-30"},{"v":1.69e-28,"d":"1.69E-28"},"full_name=tubulin beta chain 3. tubulin beta chain 3. encodes tubulin beta-2/beta-3 chain","AT5G13330","Rap2.6L",578.38,1.4059,0.12022,11.694,{"v":1.36e-31,"d":"1.36E-31"},{"v":9.15e-30,"d":"9.15E-30"},"full_name=related to AP2 6l. related to AP2 6l. encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.","AT4G30530","GGP1",332.52,-1.9883,0.13784,-14.425,3.58E-47,2.32E-45,"full_name=gamma-glutamyl peptidase 1. Class I glutamine amidotransferase-like superfamily protein. Encodes a gamma-glutamyl peptidase, outside the GGT family, that can hydrolyze gamma-glutamyl peptide bonds.","AT5G04500","GINT1",1952.8,-0.90954,0.082246,-11.059,1.99E-28,1.25E-26,"glycosyltransferase family protein 47. a member of the Glycosyltransferase Family 64 (according to CAZy Database)"]
["AT3G12780","PGK1",1525.4,-1.1936,0.10642,-11.216,{"v":3.42e-29,"d":"3.42E-29"},{"v":2.43e-27,"d":"2.43E-27"},"full_name=phosphoglycerate kinase 1. phosphoglycerate kinase 1. nuclear phosphoglycerate kinase (PGK1)","AT2G25130",null,121.83,-2.6774,0.23431,-11.427,3.08E-30,2.12E-28,"ARM repeat superfamily protein.","AT5G67600","WIH1",342.2,1.8034,0.15432,11.686,{"v":1.5e-31,"d":"1.50E-31"},{"v":1e-29,"d":"1.00E-29"},"full_name=WINDHOSE 1. cysteine-rich TM module stress tolerance protein.","AT1G15050","IAA34",124.98,-3.733,0.25879,-14.425,{"v":3.62e-47,"d":"3.62E-47"},{"v":2.34e-45,"d":"2.34E-45"},"full_name=indole-3-acetic acid inducible 34. indole-3-acetic acid inducible 34. Belongs to auxin inducible gene family.","AT1G07645","DSI-1VOC",4838.7,-1.0888,0.098462,-11.059,1.99E-28,1.25E-26,"full_name=dessication-induced 1VOC superfamily protein. dessication-induced 1VOC superfamily protein."]
["AT4G14770","TCX2",428.51,-2.0999,0.18752,-11.198,{"v":4.17e-29,"d":"4.17E-29"},{"v":2.95e-27,"d":"2.95E-27"},"full_name=TESMIN/TSO1-like CXC 2. TESMIN/TSO1-like CXC 2.","AT2G35300","LEA18",332.51,1.8624,0.16309,11.42,{"v":3.33e-30,"d":"3.33E-30"},{"v":2.29e-28,"d":"2.29E-28"},"full_name=late embryogenesis abundant 18. Late embryogenesis abundant protein, group 1 protein. Encodes LEA4-2/LEA18, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment.","AT4G20140","GSO1",180.2,-2.2652,0.19444,-11.65,{"v":2.3e-31,"d":"2.30E-31"},{"v":1.53e-29,"d":"1.53E-29"},"full_name=GASSHO1. Leucine-rich repeat transmembrane protein kinase. Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis.","AT5G59800","MBD7",245.51,-2.3028,0.15994,-14.398,{"v":5.3E-47,"d":"5.30E-47"},{"v":3.41e-45,"d":"3.41E-45"},"full_name=methyl-CPG-binding domain 7. methyl-CPG-binding domain 7. Encodes a protein containing a methyl-CpG-binding domain that acts as an anti-silencing factor that prevent gene repression and DNA hypermethylation by tethering other anti-silencing factors to methylated DNA, which enables the function of DNA demethylases that in turn limit DNA methylation and prevent transcriptional gene silencing.","AT4G38810","SCS",4452.6,0.63647,0.057558,11.058,{"v":2.01e-28,"d":"2.01E-28"},1.26E-26,"Calcium-binding EF-hand family protein."]
["AT2G02130","LCR68",625.71,-1.3638,0.12188,-11.19,{"v":4.58e-29,"d":"4.58E-29"},3.23E-27,"full_name=low-molecular-weight cysteine-rich 68. low-molecular-weight cysteine-rich 68. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","AT1G01090","PDH-E1 ALPHA",2203.9,-1.0037,0.087947,-11.412,3.64E-30,{"v":2.49e-28,"d":"2.49E-28"},"full_name=pyruvate dehydrogenase E1 alpha. pyruvate dehydrogenase E1 alpha. pyruvate dehydrogenase E1 alpha subunit","AT5G57550","XTH25",38493,1.2918,0.11092,11.647,{"v":2.39e-31,"d":"2.39E-31"},{"v":1.58e-29,"d":"1.58E-29"},"full_name=xyloglucan endotransglucosylase/hydrolase 25. xyloglucan endotransglucosylase/hydrolase 25. xyloglucan endotransglycosylase-related protein (XTR3)","AT1G54740",null,244.5,-2.6172,0.18189,-14.389,{"v":6.07e-47,"d":"6.07E-47"},{"v":3.89e-45,"d":"3.89E-45"},"FANTASTIC four-like protein (DUF3049).","AT5G62900",null,492.88,1.4193,0.12867,11.03,{"v":2.73e-28,"d":"2.73E-28"},{"v":1.7e-26,"d":"1.70E-26"},"basic-leucine zipper transcription factor K."]
["AT2G41390",null,4148.1,1.9399,0.17341,11.187,{"v":4.73e-29,"d":"4.73E-29"},{"v":3.32e-27,"d":"3.32E-27"},"Pollen Ole e 1 allergen and extensin family protein.","AT4G36180","MUL",126.62,-2.6445,0.23176,-11.41,{"v":3.71e-30,"d":"3.71E-30"},{"v":2.53e-28,"d":"2.53E-28"},"Leucine-rich receptor-like protein kinase family protein.","AT1G21000","PLATZ1",1307.4,2.1882,0.18793,11.644,{"v":2.47e-31,"d":"2.47E-31"},{"v":1.63e-29,"d":"1.63E-29"},"PLATZ transcription factor family protein.","AT1G76670","URGT1",219.98,-2.4109,0.16759,-14.386,{"v":6.37e-47,"d":"6.37E-47"},{"v":4.06e-45,"d":"4.06E-45"},"Nucleotide-sugar transporter family protein.","AT2G38820",null,1675.3,1.2531,0.1139,11.002,{"v":3.75e-28,"d":"3.75E-28"},2.33E-26,"DNA-directed RNA polymerase subunit beta-beta protein, putative (DUF506)."]
["AT1G53520","FAP3",668.34,-1.413,0.12643,-11.176,{"v":5.35e-29,"d":"5.35E-29"},{"v":3.74e-27,"d":"3.74E-27"},"full_name=fatty-acid-binding protein 3. Chalcone-flavanone isomerase family protein. Encodes a plastid stroma localized fatty acid binding protein involved in fatty acid metabolism.","AT2G44260",null,785.16,1.3824,0.12151,11.376,{"v":5.49e-30,"d":"5.49E-30"},{"v":3.73e-28,"d":"3.73E-28"},"DUF946 family protein (DUF946).","AT5G24300","SS1",216.61,-1.9845,0.17043,-11.644,{"v":2.47e-31,"d":"2.47E-31"},{"v":1.63e-29,"d":"1.63E-29"},"full_name=starch synthase 1. Glycogen/starch synthases, ADP-glucose type. SSI is a plastidial enzyme and crucial for the synthesis of normal amylopectin in the leaves of Arabidopsis. The absence of SSI results in a deficiency in the number of shorter glucans which in turn affect the formation and connection of the amylopectin clusters in starch.","AT2G29940","ABCG31",175.62,-4.0894,0.28455,-14.372,{"v":7.8e-47,"d":"7.80E-47"},{"v":4.96e-45,"d":"4.96E-45"},"full_name=ATP-binding cassette G31. pleiotropic drug resistance 3.","AT5G16960",null,85.696,3.5193,0.3201,10.994,{"v":4.07e-28,"d":"4.07E-28"},2.52E-26,"Zinc-binding dehydrogenase family protein."]
["AT1G44575","NPQ4",1868.9,-1.4145,0.12688,-11.149,{"v":7.27e-29,"d":"7.27E-29"},{"v":5.07e-27,"d":"5.07E-27"},"full_name=NONPHOTOCHEMICAL QUENCHING 4. Chlorophyll A-B binding family protein. Encoding PSII-S (CP22), a ubiquitous pigment-binding protein associated with photosystem II (PSII) of higher plants. Involved in nonphotochemical quenching rather than in photosynthesis. Mutant has a normal violaxanthin cycle but has a limited capacity of quenching singlet excited chlorophylls and is tolerant to lipid peroxidation.","AT4G18680",null,743.73,1.4207,0.12489,11.375,{"v":5.54e-30,"d":"5.54E-30"},3.74E-28,"delay of germination protein.","AT1G68170","UMAMIT23",597.35,-2.2497,0.19326,-11.64,2.57E-31,{"v":1.68e-29,"d":"1.68E-29"},"full_name=Usually multiple acids move in and out Transporters 23. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT3G13080","ABCC3",775.53,1.4303,0.10007,14.293,{"v":2.41e-46,"d":"2.41E-46"},1.53E-44,"full_name=ATP-binding cassette C3. multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.","AT5G17540",null,316.18,1.8666,0.17064,10.939,{"v":7.52e-28,"d":"7.52E-28"},{"v":4.64e-26,"d":"4.64E-26"},"HXXXD-type acyl-transferase family protein."]
["AT3G27660","OLEO4",58319,0.96837,0.086892,11.145,{"v":7.61e-29,"d":"7.61E-29"},{"v":5.29e-27,"d":"5.29E-27"},"full_name=oleosin 4. oleosin 4. Encodes oleosin4 (Plant Cell, 2006, 18:1961), a protein found in oil bodies, involved in seed lipid accumulation. Functions in freezing tolerance of seeds. Note: also referred to as OLE3 in Plant Journal 2008, 55:798.","AT3G55240",null,80.937,-3.8948,0.34248,-11.372,{"v":5.75e-30,"d":"5.75E-30"},{"v":3.87e-28,"d":"3.87E-28"},"Plant protein 1589 of unknown function. Overexpression leads to PEL (Pseudo-Etiolation in Light) phenotype.","AT2G24170",null,99.237,-3.4024,0.29304,-11.611,{"v":3.62e-31,"d":"3.62E-31"},{"v":2.36e-29,"d":"2.36E-29"},"Endomembrane protein 70 protein family.","AT4G37180","UIF1",138.15,-4.0385,0.28264,-14.288,{"v":2.59e-46,"d":"2.59E-46"},{"v":1.63e-44,"d":"1.63E-44"},"Homeodomain-like superfamily protein. myb family transcription factor, contains Pfam domain, PF00249: Myb-like DNA-binding domain l; also isolated as a putative cytoskeletal protein in a yeast screen","AT2G30600",null,1147.2,-0.93238,0.08533,-10.927,{"v":8.58e-28,"d":"8.58E-28"},5.28E-26,"BTB/POZ domain-containing protein."]
["AT2G29890","VLN1",186.8,-1.9818,0.17786,-11.142,{"v":7.8e-29,"d":"7.80E-29"},{"v":5.4e-27,"d":"5.40E-27"},"full_name=villin 1. villin-like 1. Encodes a ubiquitously expressed villin-like protein, whose mRNA may be alternatively processed. Villin belongs to a superfamily of actin binding proteins called the villin/gelsolin family. Animal villins are involved in actin binding. VLN1 protein co-localizes with actin filaments in several assays. VLN1 binds and bundles F-actin in a calcium-independent manner. It does not nucleate, cap or sever actin filaments and it stabilizes actin filaments, protecting them from ADF-mediated depolymerization.","AT5G55230","MAP65-1",143.47,-2.432,0.21408,-11.36,6.58E-30,{"v":4.41e-28,"d":"4.41E-28"},"full_name=microtubule-associated proteins 65-1. microtubule-associated proteins 65-1. Binds and bundles microtubules. Plays a role in stabilizing anti-parallel microtubules in the central spindle at anaphase to early cytokinesis but is not essential at the midline of the phragmoplast at later stages. The timing with which the MAP65-1 was targeted to the spindle appears to be regulated by a phosphorylation sensitive switch. Enhances microtubule polymerization, promotes nucleation and stabilizes microtubules against cold treatment and dilution.","AT3G58740","CSY1",91.69,-4.5487,0.39181,-11.61,{"v":3.69e-31,"d":"3.69E-31"},{"v":2.4e-29,"d":"2.40E-29"},"full_name=citrate synthase 1. citrate synthase 1. Encodes a peroxisomal citrate synthase that is expressed in siliques and developing seeds.","AT3G53510","ABCG20",146.86,-5.2136,0.36522,-14.275,{"v":3.13e-46,"d":"3.13E-46"},{"v":1.96e-44,"d":"1.96E-44"},"full_name=ATP-binding cassette G20. ABC-2 type transporter family protein. Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16).","AT2G34355",null,548.51,1.1209,0.10269,10.915,{"v":9.8e-28,"d":"9.80E-28"},{"v":6e-26,"d":"6.00E-26"},"Major facilitator superfamily protein."]
["AT2G45340",null,379.02,-2.2404,0.20123,-11.134,{"v":8.61e-29,"d":"8.61E-29"},{"v":5.94e-27,"d":"5.94E-27"},"Leucine-rich repeat protein kinase family protein.","AT1G23070",null,147.23,2.7532,0.24239,11.358,6.73E-30,{"v":4.5e-28,"d":"4.50E-28"},"organic solute transporter ostalpha protein (DUF300).","AT3G17520","SSLEA",38758,1.3642,0.11752,11.609,{"v":3.72e-31,"d":"3.72E-31"},{"v":2.41e-29,"d":"2.41E-29"},"Late embryogenesis abundant protein (LEA) family protein.","AT1G20630","CAT1",2693.9,-1.0519,0.07369,-14.275,{"v":3.14e-46,"d":"3.14E-46"},{"v":1.96e-44,"d":"1.96E-44"},"full_name=catalase 1. catalase 1. Catalyzes the reduction of hydrogen peroxide using heme group as cofactor. Protects cells from toxicity by H2O2.","AT1G13190",null,700.52,1.0627,0.097429,10.907,{"v":1.07e-27,"d":"1.07E-27"},{"v":6.5E-26,"d":"6.50E-26"},"RNA-binding (RRM/RBD/RNP motifs) family protein."]
["AT4G19410","PAE7",1261.4,1.1172,0.10038,11.13,{"v":8.94e-29,"d":"8.94E-29"},{"v":6.14e-27,"d":"6.14E-27"},"Pectinacetylesterase family protein.","AT2G18570",null,2056.1,1.2053,0.10624,11.345,{"v":7.83e-30,"d":"7.83E-30"},{"v":5.21e-28,"d":"5.21E-28"},"UDP-Glycosyltransferase superfamily protein.","AT3G14630","CYP72A9",433.05,-2.1323,0.18394,-11.592,{"v":4.5e-31,"d":"4.50E-31"},{"v":2.9e-29,"d":"2.90E-29"},"full_name=cytochrome P450, family 72, subfamily A, polypeptide 9. cytochrome P450, family 72, subfamily A, polypeptide 9. putative cytochrome P450","AT4G12400","Hop3",1594.5,1.5511,0.10885,14.25,{"v":4.5E-46,"d":"4.50E-46"},{"v":2.8E-44,"d":"2.80E-44"},"full_name=Hop3. stress-inducible protein. Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","AT1G27030",null,257.85,-2.0979,0.19237,-10.905,1.09E-27,{"v":6.61e-26,"d":"6.61E-26"},"hypothetical protein."]
["AT2G37360","ABCG2",412.49,-1.7496,0.15769,-11.095,{"v":1.32e-28,"d":"1.32E-28"},{"v":9.04e-27,"d":"9.04E-27"},"full_name=ATP-binding cassette G2. ABC-2 type transporter family protein. Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16).","AT4G15396","CYP702A6",3944.1,1.1208,0.098916,11.331,{"v":9.26e-30,"d":"9.26E-30"},{"v":6.14e-28,"d":"6.14E-28"},"full_name=cytochrome P450, family 702, subfamily A, polypeptide 6. cytochrome P450, family 702, subfamily A, polypeptide 6. a member of the cytochrome P450 family. molecular function unknown.","AT1G25422",null,852.17,1.3567,0.1172,11.576,{"v":5.43e-31,"d":"5.43E-31"},3.49E-29,"hypothetical protein.","AT2G41390",null,985.45,-8.05,0.56537,-14.238,{"v":5.29e-46,"d":"5.29E-46"},{"v":3.29e-44,"d":"3.29E-44"},"Pollen Ole e 1 allergen and extensin family protein.","AT1G75860",null,518.01,1.1751,0.10782,10.898,1.18E-27,{"v":7.12e-26,"d":"7.12E-26"},"DNA ligase."]
["AT1G04680",null,278.44,-2.5446,0.22947,-11.089,1.42E-28,{"v":9.69e-27,"d":"9.69E-27"},"Pectin lyase-like superfamily protein.","AT2G24270","ALDH11A3",1444.6,-1.4787,0.13063,-11.32,{"v":1.05e-29,"d":"1.05E-29"},{"v":6.92e-28,"d":"6.92E-28"},"full_name=aldehyde dehydrogenase 11A3. aldehyde dehydrogenase 11A3. Encodes a protein with non-phosphorylating NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity. The activity of the enzyme was determined from leaf extracts; the enzyme has not been purified to confirm activity.","AT5G10000","FD4",99.964,3.5752,0.30922,11.562,{"v":6.43e-31,"d":"6.43E-31"},{"v":4.11e-29,"d":"4.11E-29"},"full_name=ferredoxin 4. ferredoxin 4.","AT4G00360","CYP86A2",131.23,-4.8745,0.34258,-14.229,{"v":6.07e-46,"d":"6.07E-46"},{"v":3.76e-44,"d":"3.76E-44"},"full_name=cytochrome P450, family 86, subfamily A, polypeptide 2. cytochrome P450, family 86, subfamily A, polypeptide 2. Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems.","AT3G60970","ABCC15",143.24,2.2761,0.20894,10.894,1.24E-27,{"v":7.46e-26,"d":"7.46E-26"},"full_name=ATP-binding cassette C15. multidrug resistance-associated protein 15. member of MRP subfamily"]
["AT2G20670",null,109.21,-3.0301,0.27357,-11.076,{"v":1.64e-28,"d":"1.64E-28"},1.11E-26,"sugar phosphate exchanger, putative (DUF506).","AT1G15500","ATNTT2",1204.5,-1.2348,0.10912,-11.316,{"v":1.1E-29,"d":"1.10E-29"},7.22E-28,"TLC ATP/ADP transporter.","AT5G49665",null,143.15,2.8323,0.24517,11.552,{"v":7.18e-31,"d":"7.18E-31"},{"v":4.58e-29,"d":"4.58E-29"},"Zinc finger (C3HC4-type RING finger) family protein.","AT3G23430","PHO1",132.24,-4.6953,0.33005,-14.226,{"v":6.3E-46,"d":"6.30E-46"},{"v":3.88e-44,"d":"3.88E-44"},"full_name=phosphate 1. phosphate 1. Encodes a protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains. The mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. Its expression is repressed by phosphate (Pi) in shoots, and transiently induced by phosphite (Phi) in roots and shoots.","AT3G14990","DJ1A",1548.3,0.87807,0.080715,10.879,{"v":1.46e-27,"d":"1.46E-27"},{"v":8.74e-26,"d":"8.74E-26"},"full_name=DJ-1 homolog A. Class I glutamine amidotransferase-like superfamily protein. Encodes a homolog of animal DJ-1 superfamily protein. In the A. thaliana genome, three genes encoding close homologs of human DJ-1 were identified AT3G14990 (DJ1A), AT1G53280 (DJ1B) and AT4G34020 (DJ1C). Among the three homologs, DJ1C is essential for chloroplast development and viability. It exhibits glyoxalase activity towards glyoxal and methylglyoxal."]
["AT2G01520","MLP328",99.442,3.1109,0.28209,11.028,{"v":2.8e-28,"d":"2.80E-28"},{"v":1.89e-26,"d":"1.89E-26"},"full_name=MLP-like protein 328. MLP-like protein 328. Encodes a cis-cinnamic acid responsive gene that is a member of the major latex protein-like gene family and plays a role in promoting vegetative growth and delaying &#64258;owering.","AT5G66110","HIPP27",232.51,2.0164,0.17913,11.256,{"v":2.16e-29,"d":"2.16E-29"},{"v":1.41e-27,"d":"1.41E-27"},"full_name=heavy metal associated isoprenylated plant protein 27. Heavy metal transport/detoxification superfamily protein.","AT1G21750","PDIL1-1",1297.6,-1.2756,0.11048,-11.546,{"v":7.69e-31,"d":"7.69E-31"},{"v":4.89e-29,"d":"4.89E-29"},"full_name=PDI-like 1-1. PDI-like 1-1. Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.","AT5G10580",null,128.29,-4.3938,0.30913,-14.214,{"v":7.54e-46,"d":"7.54E-46"},{"v":4.63e-44,"d":"4.63E-44"},"plant/protein (Protein of unknown function, DUF599).","AT4G27460","CBSX5",1453,0.95255,0.087646,10.868,{"v":1.63e-27,"d":"1.63E-27"},{"v":9.78e-26,"d":"9.78E-26"},"full_name=CBS domain containing protein 5. Cystathionine beta-synthase (CBS) family protein."]
["AT1G10670","ACLA-1",1342.8,-1.1515,0.1046,-11.008,{"v":3.49e-28,"d":"3.49E-28"},{"v":2.35e-26,"d":"2.35E-26"},"full_name=ATP-citrate lyase A-1. ATP-citrate lyase A-1. One of the three genes encoding subunit A of the trimeric protein ATP Citrate Lyase. Antisense ACLA-1 plants cause a reduction in cytosolic acetyl-CoA metabolism and have upregulation of stress-related genes and down-regulation of primary metabolism and growth genes, suggesting the mutation restricts normal growth and developmental processes and puts the plant into a state of stress.","AT2G47400","CP12-1",400.48,-1.7562,0.15729,-11.165,{"v":6.02e-29,"d":"6.02E-29"},{"v":3.93e-27,"d":"3.93E-27"},"full_name=CP12 domain-containing protein 1. CP12 domain-containing protein 1. CP12-1 encodes a small peptide found in the chloroplast stroma. It belongs to the CP12 gene family thought to be involved in the formation of a supramolecular complex with glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK) embedded in the Calvin cycle.","AT3G44830",null,502.2,1.4601,0.12659,11.534,{"v":8.87e-31,"d":"8.87E-31"},{"v":5.6e-29,"d":"5.60E-29"},"Lecithin:cholesterol acyltransferase family protein.","AT3G14990","DJ1A",584.67,1.5335,0.10827,14.164,1.54E-45,{"v":9.39e-44,"d":"9.39E-44"},"full_name=DJ-1 homolog A. Class I glutamine amidotransferase-like superfamily protein. Encodes a homolog of animal DJ-1 superfamily protein. In the A. thaliana genome, three genes encoding close homologs of human DJ-1 were identified AT3G14990 (DJ1A), AT1G53280 (DJ1B) and AT4G34020 (DJ1C). Among the three homologs, DJ1C is essential for chloroplast development and viability. It exhibits glyoxalase activity towards glyoxal and methylglyoxal.","AT2G38530","LTP2",840.13,-1.2011,0.11057,-10.862,{"v":1.75e-27,"d":"1.75E-27"},1.04E-25,"full_name=lipid transfer protein 2. lipid transfer protein 2. Involved in lipid transfer between membranes. Belongs to a family of Lipid transfer proteins. Sequence similarity to other plant/Arabidopsis LPT genes but highest similarity to LPT1. Stress and pathogen-inducible motifs found in the upstream region. Expressed in flower, leaves and siliques but absent in roots. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15."]
["AT1G73410","MYB54",95.217,-3.1742,0.28859,-10.999,{"v":3.87e-28,"d":"3.87E-28"},{"v":2.6e-26,"d":"2.60E-26"},"full_name=myb domain protein 54. myb domain protein 54. Encodes a putative transcription factor that is a member of the R2R3-MYB family.","AT5G12030","HSP17.6A",152.51,3.1563,0.28339,11.137,{"v":8.24e-29,"d":"8.24E-29"},{"v":5.36e-27,"d":"5.36E-27"},"full_name=heat shock protein 17.6A. heat shock protein 17.6A. Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development.","AT3G14595",null,1500.4,1.2174,0.10555,11.534,{"v":8.88e-31,"d":"8.88E-31"},{"v":5.6e-29,"d":"5.60E-29"},"Ribosomal protein L18ae family.","AT5G43060","RD21B",141.33,-4.8454,0.34265,-14.141,{"v":2.12e-45,"d":"2.12E-45"},{"v":1.29e-43,"d":"1.29E-43"},"full_name=esponsive to dehydration 21B. Granulin repeat cysteine protease family protein.","AT3G47800",null,194.71,1.974,0.18177,10.86,1.79E-27,1.07E-25,"Galactose mutarotase-like superfamily protein."]
["AT4G31590","CSLC5",2228.2,1.085,0.09868,10.995,{"v":4.05e-28,"d":"4.05E-28"},{"v":2.71e-26,"d":"2.71E-26"},"full_name=Cellulose-synthase-like C5. Cellulose-synthase-like C5. encodes a gene similar to cellulose synthase","AT4G12680",null,1013.1,1.193,0.10738,11.11,{"v":1.12e-28,"d":"1.12E-28"},{"v":7.29e-27,"d":"7.29E-27"},"transmembrane protein.","AT1G67920",null,110.16,3.108,0.26966,11.526,{"v":9.77e-31,"d":"9.77E-31"},6.14E-29,"hypothetical protein.","AT5G23190","CYP86B1",141.47,-5.6996,0.40404,-14.107,{"v":3.46e-45,"d":"3.46E-45"},{"v":2.1e-43,"d":"2.10E-43"},"full_name=cytochrome P450, family 86, subfamily B, polypeptide 1. cytochrome P450, family 86, subfamily B, polypeptide 1. cytochrome P450 CYP86B1, nuclear gene for chloroplast product. CYP86B1 is a very long chain fatty acid hydroxylase specifically involved in polyester monomer biosynthesis during the course of plant development.","AT2G27680",null,1283.4,-0.8348,0.077002,-10.841,{"v":2.2e-27,"d":"2.20E-27"},{"v":1.3E-25,"d":"1.30E-25"},"NAD(P)-linked oxidoreductase superfamily protein."]
["AT2G39110","PBL38",102.16,-2.801,0.25629,-10.929,{"v":8.38e-28,"d":"8.38E-28"},{"v":5.58e-26,"d":"5.58E-26"},"Protein kinase superfamily protein.","AT3G29190",null,295.44,-1.8789,0.16925,-11.101,{"v":1.24e-28,"d":"1.24E-28"},{"v":7.98e-27,"d":"7.98E-27"},"Terpenoid cyclases/Protein prenyltransferases superfamily protein.","AT3G29030","EXPA5",142.67,-2.9832,0.25884,-11.525,{"v":9.85e-31,"d":"9.85E-31"},{"v":6.17e-29,"d":"6.17E-29"},"full_name=expansin A5. expansin A5. Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)","AT2G34740",null,2257.4,2.2317,0.15852,14.078,{"v":5.16e-45,"d":"5.16E-45"},{"v":3.12e-43,"d":"3.12E-43"},"protein phosphatase 2C family protein.","AT5G28540","BIP1",331.3,-1.3878,0.12802,-10.841,{"v":2.21e-27,"d":"2.21E-27"},{"v":1.3E-25,"d":"1.30E-25"},"heat shock protein 70 (Hsp 70) family protein. Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei."]
["AT1G78210",null,185.64,-1.9965,0.18276,-10.924,{"v":8.87e-28,"d":"8.87E-28"},{"v":5.89e-26,"d":"5.89E-26"},"alpha/beta-Hydrolases superfamily protein.","AT5G55490","GEX1",235.2,1.804,0.16257,11.097,{"v":1.3E-28,"d":"1.30E-28"},{"v":8.37e-27,"d":"8.37E-27"},"full_name=gamete expressed protein 1. gamete expressed protein 1. Encodes a transmembrane domain containing protein that is expressed in pollen germ cells.","AT2G45040",null,112.47,3.1655,0.27489,11.516,{"v":1.1e-30,"d":"1.10E-30"},6.86E-29,"Matrixin family protein.","AT3G07360","PUB9",963.94,-1.3871,0.098683,-14.056,{"v":7.08e-45,"d":"7.08E-45"},{"v":4.27e-43,"d":"4.27E-43"},"full_name=plant U-box 9. plant U-box 9. Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.","AT2G41560","ACA4",131.35,2.5776,0.23829,10.817,{"v":2.86e-27,"d":"2.86E-27"},{"v":1.68e-25,"d":"1.68E-25"},"full_name=autoinhibited Ca(2+)-ATPase, isoform 4. autoinhibited Ca(2+)-ATPase, isoform 4. Encodes a calmodulin-regulated Ca(2+)-ATPase that improves salt tolerance in yeast. Localized to the vacuole. Lesion mimic phenotype when mutation in the gene is combined with a mutation in ACA11. Lesion mimic phenotype of double knockout can be suppressed by nutritional supplements that increase anion levels (e.g. 15 mM Nitrate, Chloride, or Phosphate)."]
["AT3G21240","4CL2",654.64,-1.2757,0.11711,-10.893,1.24E-27,{"v":8.19e-26,"d":"8.19E-26"},"full_name=4-coumarate:CoA ligase 2. 4-coumarate:CoA ligase 2. encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate.","AT5G07260",null,363.27,-1.5802,0.14248,-11.091,{"v":1.39e-28,"d":"1.39E-28"},{"v":8.9e-27,"d":"8.90E-27"},"START (StAR-related lipid-transfer) lipid-binding domain-containing protein.","AT1G26570","UGD1",98.507,-3.7047,0.32277,-11.478,{"v":1.71e-30,"d":"1.71E-30"},1.06E-28,"full_name=UDP-glucose dehydrogenase 1. UDP-glucose dehydrogenase 1.","AT5G20700",null,134.88,-5.8007,0.41315,-14.04,{"v":8.83e-45,"d":"8.83E-45"},{"v":5.3e-43,"d":"5.30E-43"},"senescence-associated family protein, putative (DUF581).","AT5G57655",null,2501.1,0.79226,0.073296,10.809,3.12E-27,{"v":1.82e-25,"d":"1.82E-25"},"xylose isomerase family protein."]
["AT2G43910","HOL1",102.48,-3.0134,0.27682,-10.886,{"v":1.35e-27,"d":"1.35E-27"},{"v":8.88e-26,"d":"8.88E-26"},"full_name=HARMLESS TO OZONE LAYER 1. HARMLESS TO OZONE LAYER 1.","AT4G02770","PSAD-1",93.257,-5.8933,0.53176,-11.083,{"v":1.52e-28,"d":"1.52E-28"},{"v":9.72e-27,"d":"9.72E-27"},"full_name=photosystem I subunit D-1. photosystem I subunit D-1. Encodes a protein predicted by sequence similarity with spinach PsaD to be photosystem I reaction center subunit II (PsaD1)","AT3G50740","UGT72E1",250.42,1.8487,0.16117,11.47,{"v":1.86e-30,"d":"1.86E-30"},{"v":1.15e-28,"d":"1.15E-28"},"full_name=UDP-glucosyl transferase 72E1. UDP-glucosyl transferase 72E1. UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.","AT1G21460","SWEET1",312.9,2.5471,0.18174,14.015,{"v":1.26e-44,"d":"1.26E-44"},{"v":7.56e-43,"d":"7.56E-43"},"Nodulin MtN3 family protein.","AT3G45650","NAXT1",197.41,1.873,0.17332,10.806,{"v":3.21e-27,"d":"3.21E-27"},1.87E-25,"full_name=nitrate excretion transporter1. nitrate excretion transporter1. Encodes a nitrate efflux transporter NAXT1 (for NITRATE EXCRETION TRANSPORTER1). Localized to the plasma membrane. NAXT1 belongs to a subclass of seven NAXT members from the large NITRATE TRANSPORTER1/PEPTIDE TRANSPORTER family and is mainly expressed in the cortex of mature roots."]
["AT4G35420","DRL1",114.14,-2.5949,0.23846,-10.882,{"v":1.4E-27,"d":"1.40E-27"},{"v":9.22e-26,"d":"9.22E-26"},"full_name=dihydroflavonol 4-reductase-like1. dihydroflavonol 4-reductase-like1. Encodes DRL1 (Dihydroflavonol 4-reductase-like1), a closely related homolog of the rice anther-specific gene OsDFR2. DRL1 may be involved in a metabolic pathway essential for pollen wall development and male fertility. Mutant plants have impaired pollen formation and seed production.","AT3G28040",null,75.259,-4.3868,0.39608,-11.076,{"v":1.65e-28,"d":"1.65E-28"},1.05E-26,"Leucine-rich receptor-like protein kinase family protein.","AT1G76590","PLATZ2",969.64,1.4045,0.12263,11.453,{"v":2.26e-30,"d":"2.26E-30"},{"v":1.39e-28,"d":"1.39E-28"},"PLATZ transcription factor family protein.","AT5G44120","CRA1",876640,-1.8428,0.13158,-14.006,1.44E-44,{"v":8.57e-43,"d":"8.57E-43"},"full_name=CRUCIFERINA. RmlC-like cupins superfamily protein. Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT5G57870","eIFiso4G1",1005.6,0.9758,0.090331,10.802,{"v":3.35e-27,"d":"3.35E-27"},1.95E-25,"full_name=eukaryotic translation Initiation Factor isoform 4G1. MIF4G domain-containing protein / MA3 domain-containing protein. Encodes a putative eukaryotic translation initiation factor"]
["AT4G34250","KCS16",1211.2,-1.3435,0.12356,-10.873,{"v":1.55e-27,"d":"1.55E-27"},1.01E-25,"full_name=3-ketoacyl-CoA synthase 16. 3-ketoacyl-CoA synthase 16. Encodes KCS16, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT2G37390","NAKR2",143.59,-2.5913,0.23404,-11.072,1.71E-28,1.08E-26,"full_name=SODIUM POTASSIUM ROOT DEFECTIVE 2. Chloroplast-targeted copper chaperone protein.","AT5G41460",null,370.92,-1.7569,0.15349,-11.447,{"v":2.44e-30,"d":"2.44E-30"},{"v":1.5E-28,"d":"1.50E-28"},"transferring glycosyl group transferase (DUF604).","AT3G05500","LDAP3",1929.2,-1.627,0.11628,-13.992,{"v":1.74e-44,"d":"1.74E-44"},1.04E-42,"Rubber elongation factor protein (REF). Encodes a protein that associates with lipid droplet surfaces.","AT3G07360","PUB9",473.43,-1.2829,0.11883,-10.796,{"v":3.59e-27,"d":"3.59E-27"},{"v":2.08e-25,"d":"2.08E-25"},"full_name=plant U-box 9. plant U-box 9. Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays."]
["AT2G21250",null,455.84,-1.5117,0.13933,-10.849,2.01E-27,1.31E-25,"NAD(P)-linked oxidoreductase superfamily protein.","AT5G05690","CPD",473.95,-1.4165,0.12819,-11.05,{"v":2.2E-28,"d":"2.20E-28"},{"v":1.39e-26,"d":"1.39E-26"},"full_name=CONSTITUTIVE PHOTOMORPHOGENIC DWARF. Cytochrome P450 superfamily protein. Encodes a member of the CP90A family, a cytochrome P450 monooxygenase which converts 6-deoxocathasterone to 6-deoxoteasterone in the late C6 oxidation pathway and cathasterone to teasterone in the early C6 oxidation pathway of brassinolide biosynthesis. Expressed in cotyledons and leaves. Mutants display de-etiolation and derepression of light-induced genes in the dark, dwarfism, male sterility and activation of stress-regulated genes in the light. The expression of the gene using a CPD promoter:LUC fusion construct was shown to be under circadian and light control. Additionally, the circadian regulation was shown to be independent of BR levels as it remains unchanged in <i>bri1</i> mutant lines. CPD appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through a BRI1-mediated signaling pathway that affects FLC expression levels, as uncovered by double mutant analyses.","AT2G21820",null,4079.2,1.6463,0.14427,11.412,{"v":3.66e-30,"d":"3.66E-30"},{"v":2.24e-28,"d":"2.24E-28"},"seed maturation protein.","AT2G44260",null,341.21,-3.7248,0.26634,-13.985,1.93E-44,1.14E-42,"DUF946 family protein (DUF946).","AT3G52140","NOXY38",2557.4,0.6683,0.062056,10.769,{"v":4.81e-27,"d":"4.81E-27"},2.77E-25,"full_name=non responding to oxylipins 38. tetratricopeptide repeat (TPR)-containing protein. Involved in regulating mitochondrial quality control. Regulates mitochondrial association time and thereby is involved in mitochondrial fusion. Mutants show unregulated autophagy and display transcriptomic markers of mitochondrial stress."]
["AT2G28840","XBAT31",662.46,-1.3744,0.12806,-10.732,{"v":7.17e-27,"d":"7.17E-27"},{"v":4.66e-25,"d":"4.66E-25"},"full_name=XB3 ortholog 1 in Arabidopsis thaliana. hypothetical protein.","AT4G02690","LFG3",438.01,1.6347,0.14835,11.019,{"v":3.09e-28,"d":"3.09E-28"},1.94E-26,"Bax inhibitor-1 family protein.","AT1G01470","LEA14",1530.4,1.496,0.13112,11.41,3.74E-30,2.28E-28,"full_name=LATE EMBRYOGENESIS ABUNDANT 14. Late embryogenesis abundant protein. Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against dessication.","AT1G07890","APX1",126.64,-4.3902,0.31397,-13.983,1.98E-44,{"v":1.17e-42,"d":"1.17E-42"},"full_name=ascorbate peroxidase 1. ascorbate peroxidase 1. Encodes a cytosolic ascorbate peroxidase APX1. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.","AT5G24910","CYP714A1",762.26,-1.0197,0.09474,-10.764,{"v":5.11e-27,"d":"5.11E-27"},{"v":2.94e-25,"d":"2.94E-25"},"full_name=cytochrome P450, family 714, subfamily A, polypeptide 1. cytochrome P450, family 714, subfamily A, polypeptide 1. Member of CYP714A. Encodes one of the two tandemly duplicated gene pair ELA1 (CYP714A1) and ELA2 (CYP714A2), homologs of the rice cytochrome P450 monooxygenase gene EUI1. Double mutation of ELA1 and ELA2 results in increased biomass and enlarged organs."]
["AT3G18600",null,316.31,2.0512,0.19153,10.709,{"v":9.19e-27,"d":"9.19E-27"},{"v":5.95e-25,"d":"5.95E-25"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT2G46750","GulLO2",179.08,2.2821,0.20714,11.017,3.16E-28,{"v":1.98e-26,"d":"1.98E-26"},"full_name=L -gulono-1,4-lactone ( L -GulL) oxidase 2. D-arabinono-1,4-lactone oxidase family protein. Encodes a homolog of rat L-gulono-1,4-lactone (L-GulL) oxidase that is involved in the biosynthesis of L-ascorbic acid.","AT1G07430","HAI2",691.1,1.5128,0.13261,11.408,{"v":3.82e-30,"d":"3.82E-30"},{"v":2.32e-28,"d":"2.32E-28"},"full_name=highly ABA-induced PP2C gene 2. highly ABA-induced PP2C protein 2. Encodes a member of the group A protein phosphatase 2C (PP2C) family that is responsible for negatively regulating seed dormancy.","AT4G24220","VEP1",4796.5,0.9296,0.066513,13.976,2.18E-44,{"v":1.28e-42,"d":"1.28E-42"},"full_name=VEIN PATTERNING 1. NAD(P)-binding Rossmann-fold superfamily protein. encodes a progesterone-5beta-reductase-like protein. It has enone reductase activity against a wide range of substrates, including 3-oxo-&#916;-4,5-steroids in vitro. The in vivo substrates and product of this enzyme have not yet been elucidated but it is likely to participate in steroid metabolism. The protein contains a mammalian death domain involved in programmed cell death. The gene is expressed in the vascular system and mutants carrying a dominant mutation in the gene have defective vascular patterning. VEP1 gene expression is induced specifically by wounding.","AT3G53180","NodGS",799.07,1.0038,0.093271,10.762,{"v":5.21e-27,"d":"5.21E-27"},{"v":2.98e-25,"d":"2.98E-25"},"full_name=nodulin/glutamine synthase-like protein. nodulin/glutamine synthase-like protein. Encodes a protein that is the product of a fusion gene with a C-terminal GSI like sequence and an N-terminal part sharing homology with nodulins. It self-assembles into oligomers and its expression is increased in response to flagellin treatment. The protein co-localizes with microtubules and binds gamma-tubulin. RNAi lines are affected in root morphogenesis."]
["AT1G12080",null,392.62,-1.7525,0.16439,-10.661,{"v":1.55e-26,"d":"1.55E-26"},{"v":1e-24,"d":"1.00E-24"},"Vacuolar calcium-binding protein-like protein.","AT1G52690","LEA7",4674,1.4317,0.13026,10.991,{"v":4.2e-28,"d":"4.20E-28"},2.63E-26,"full_name=LATE EMBRYOGENESIS ABUNDANT 7. Late embryogenesis abundant protein (LEA) family protein.","AT4G34710","ADC2",1696.9,1.9555,0.17167,11.391,{"v":4.64e-30,"d":"4.64E-30"},2.81E-28,"full_name=arginine decarboxylase 2. arginine decarboxylase 2. encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. ADC2 is stress-inducible (osmotic stress). Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Overexpression causes phenotypes similar to GA-deficient plants and these plants show reduced levels of GA due to lower expression levels of AtGA20ox1, AtGA3ox3 and AtGA3ox1.","AT2G13360","AGT",434.22,1.6623,0.11896,13.973,2.27E-44,{"v":1.33e-42,"d":"1.33E-42"},"full_name=alanine:glyoxylate aminotransferase. alanine:glyoxylate aminotransferase. Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.","AT5G54960","PDC2",3316,-0.64885,0.060319,-10.757,{"v":5.5e-27,"d":"5.50E-27"},{"v":3.14e-25,"d":"3.14E-25"},"full_name=pyruvate decarboxylase-2. pyruvate decarboxylase-2. pyruvate decarboxylase-2"]
["AT3G04180",null,516.89,2.1703,0.20383,10.648,{"v":1.79e-26,"d":"1.79E-26"},{"v":1.15e-24,"d":"1.15E-24"},"RmlC-like cupins superfamily protein.","AT3G11630","2CPA",707.69,-1.2355,0.11252,-10.98,{"v":4.74e-28,"d":"4.74E-28"},{"v":2.94e-26,"d":"2.94E-26"},"Thioredoxin superfamily protein. Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues.","AT5G19220","APL1",91.871,-3.832,0.3366,-11.384,{"v":5e-30,"d":"5.00E-30"},{"v":3.02e-28,"d":"3.02E-28"},"full_name=ADP glucose pyrophosphorylase large subunit 1. ADP glucose pyrophosphorylase large subunit 1. Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL1 is the major large subunit isoform present in leaves. Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions.","AT1G56220",null,947.39,2.0974,0.15015,13.969,{"v":2.41e-44,"d":"2.41E-44"},1.41E-42,"Dormancy/auxin associated family protein.","AT4G16620","UMAMIT8",963.67,-0.89589,0.083603,-10.716,{"v":8.56e-27,"d":"8.56E-27"},4.87E-25,"full_name=Usually multiple acids move in and out Transporters 8. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein"]
["AT3G18960","REM7",420.15,-1.4613,0.13748,-10.63,{"v":2.17e-26,"d":"2.17E-26"},{"v":1.39e-24,"d":"1.39E-24"},"AP2/B3-like transcriptional factor family protein.","AT1G55810","UKL3",175.06,-2.0748,0.18895,-10.98,4.75E-28,{"v":2.94e-26,"d":"2.94E-26"},"full_name=uridine kinase-like 3. uridine kinase-like 3. One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.","AT5G19090","ATHMP46",127.51,-2.7124,0.23881,-11.358,{"v":6.77e-30,"d":"6.77E-30"},{"v":4.07e-28,"d":"4.07E-28"},"Heavy metal transport/detoxification superfamily protein.","AT4G05070","WIP2",293.35,2.84,0.20351,13.955,{"v":2.92e-44,"d":"2.92E-44"},{"v":1.69e-42,"d":"1.69E-42"},"Wound-responsive family protein.","AT3G14680","CYP72A14",406.34,-1.4418,0.13459,-10.712,{"v":8.9e-27,"d":"8.90E-27"},{"v":5.04e-25,"d":"5.04E-25"},"full_name=cytochrome P450, family 72, subfamily A, polypeptide 14. cytochrome P450, family 72, subfamily A, polypeptide 14. putative cytochrome P450"]
["AT3G48660",null,241.8,1.7164,0.16232,10.574,{"v":3.92e-26,"d":"3.92E-26"},{"v":2.5e-24,"d":"2.50E-24"},"transmembrane protein, putative (DUF 3339).","AT2G41990","CC3",201.26,-2.1583,0.19663,-10.977,{"v":4.95e-28,"d":"4.95E-28"},{"v":3.06e-26,"d":"3.06E-26"},"late embryogenesis abundant protein.","AT4G00380","FDM2",125.29,-3.2497,0.28623,-11.354,{"v":7.12e-30,"d":"7.12E-30"},4.27E-28,"full_name=factor of DNA methylation 2. XH/XS domain-containing protein. Belongs to a subgroup of SGS3-like proteins that act redundantly in RNA-directed DNA methylation: AT1G15910 (FDM1), AT4G00380 (FDM2), AT3G12550 (FDM3), AT1G13790 (FDM4), AT1G80790 (FDM5).","AT1G54575",null,145.36,-5.6453,0.40457,-13.954,{"v":2.98e-44,"d":"2.98E-44"},1.73E-42,"hypothetical protein.","AT4G31860",null,1877.6,-0.85265,0.080009,-10.657,1.62E-26,{"v":9.13e-25,"d":"9.13E-25"},"Protein phosphatase 2C family protein."]
["AT5G23660","SWEET12",373.14,-1.483,0.14047,-10.557,{"v":4.71e-26,"d":"4.71E-26"},2.99E-24,"bidirectional sugar transporter SWEET12-like protein. Encodes a member of the SWEET sucrose efflux transporter family proteins.","AT5G13630","GUN5",79.104,-3.5623,0.32461,-10.974,{"v":5.1e-28,"d":"5.10E-28"},{"v":3.14e-26,"d":"3.14E-26"},"full_name=GENOMES UNCOUPLED 5. magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH). Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.","AT2G29045","LCR62",212.76,-2.5736,0.22694,-11.34,{"v":8.29e-30,"d":"8.29E-30"},{"v":4.95e-28,"d":"4.95E-28"},"full_name=low-molecular-weight cysteine-rich 62. low-molecular-weight cysteine-rich 62. Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.","AT4G36600",null,10123,2.2874,0.16395,13.952,{"v":3.06e-44,"d":"3.06E-44"},1.76E-42,"Late embryogenesis abundant (LEA) protein.","AT5G50240","PIMT2",2915,-0.73066,0.068564,-10.657,1.62E-26,{"v":9.13e-25,"d":"9.13E-25"},"full_name=protein-l-isoaspartate methyltransferase 2. protein-l-isoaspartate methyltransferase 2. L-isoaspartyl methyltransferase 2 (PIMT2)gene, alternatively spliced."]
["AT5G48850","ATSDI1",262.94,-1.7935,0.16989,-10.557,{"v":4.72e-26,"d":"4.72E-26"},2.99E-24,"full_name=SULPHUR DEFICIENCY-INDUCED 1. Tetratricopeptide repeat (TPR)-like superfamily protein. homologous to the wheat sulphate deficiency-induced gene sdi1. Expression in root and leaf is induced by sulfur starvation. Knockout mutants retained higher root and leaf sulfate concentrations, indicating a role in regulation of stored sulfate pools.","AT2G21820",null,1560.6,1.5341,0.13988,10.968,{"v":5.46e-28,"d":"5.46E-28"},{"v":3.35e-26,"d":"3.35E-26"},"seed maturation protein.","AT2G46960","CYP709B1",1391,-1.5114,0.13333,-11.335,{"v":8.77e-30,"d":"8.77E-30"},{"v":5.22e-28,"d":"5.22E-28"},"full_name=cytochrome P450, family 709, subfamily B, polypeptide 1. cytochrome P450, family 709, subfamily B, polypeptide 1. member of CYP709B","AT1G01480","ACS2",522.8,-1.6065,0.11529,-13.934,{"v":3.92e-44,"d":"3.92E-44"},{"v":2.26e-42,"d":"2.26E-42"},"full_name=1-amino-cyclopropane-1-carboxylate synthase 2. 1-amino-cyclopropane-1-carboxylate synthase 2. a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family, isolated from a flower-specific cDNA library.","AT5G49665",null,1104.6,0.96907,0.09104,10.644,{"v":1.85e-26,"d":"1.85E-26"},1.04E-24,"Zinc finger (C3HC4-type RING finger) family protein."]
["AT1G06550",null,484.64,-1.3283,0.12586,-10.554,4.87E-26,{"v":3.07e-24,"d":"3.07E-24"},"ATP-dependent caseinolytic (Clp) protease/crotonase family protein.","AT3G20790",null,125.39,-2.5254,0.23029,-10.966,{"v":5.58e-28,"d":"5.58E-28"},{"v":3.41e-26,"d":"3.41E-26"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT5G35320",null,444.6,1.5578,0.13763,11.319,{"v":1.06e-29,"d":"1.06E-29"},{"v":6.27e-28,"d":"6.27E-28"},"DBH-like monooxygenase.","AT1G67100","LBD40",1006.4,-1.9343,0.13898,-13.918,{"v":4.94e-44,"d":"4.94E-44"},{"v":2.83e-42,"d":"2.83E-42"},"full_name=LOB domain-containing protein 40. LOB domain-containing protein 40.","AT4G29020",null,516.46,-1.2068,0.11343,-10.64,{"v":1.95e-26,"d":"1.95E-26"},1.09E-24,"glycine-rich protein."]
["AT2G18370",null,97.792,2.7959,0.26519,10.543,{"v":5.47e-26,"d":"5.47E-26"},{"v":3.44e-24,"d":"3.44E-24"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.","AT2G24580",null,308.48,-1.8696,0.17088,-10.941,{"v":7.37e-28,"d":"7.37E-28"},{"v":4.49e-26,"d":"4.49E-26"},"FAD-dependent oxidoreductase family protein.","AT1G07500","SMR5",632.74,2.3802,0.2103,11.318,{"v":1.07e-29,"d":"1.07E-29"},{"v":6.31e-28,"d":"6.31E-28"},"hypothetical protein.","AT2G25140","CLPB4",1130.9,1.175,0.084454,13.913,{"v":5.28e-44,"d":"5.28E-44"},3.02E-42,"full_name=casein lytic proteinase B4. casein lytic proteinase B4. Encodes ClpB4, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Targeted to the mitochondrion, also referred to as ClpB-m. Transcripts of ClpB4 accumulate dramatically at high temperatures, suggesting that it may be involved in response to heat stress.","AT1G29340","PUB17",464.67,1.2426,0.11684,10.635,{"v":2.05e-26,"d":"2.05E-26"},{"v":1.14e-24,"d":"1.14E-24"},"full_name=plant U-box 17. plant U-box 17. Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity. It is required for cell death and full resistance specified by Arabidopsis RPM1 and RPS4 resistance proteins against Pseudomonas syringae pv tomato."]
["AT2G40370","LAC5",1066.9,-1.2162,0.11574,-10.508,{"v":7.93e-26,"d":"7.93E-26"},{"v":4.97e-24,"d":"4.97E-24"},"full_name=laccase 5. laccase 5. putative laccase, a member of laccase family of genes (17 members in Arabidopsis).","AT1G78600","LZF1",295.74,1.5393,0.14093,10.923,{"v":8.96e-28,"d":"8.96E-28"},{"v":5.44e-26,"d":"5.44E-26"},"full_name=light-regulated zinc finger protein 1. light-regulated zinc finger protein 1.","AT2G47750","GH3.9",810.55,-1.4399,0.12747,-11.296,{"v":1.37e-29,"d":"1.37E-29"},{"v":8.09e-28,"d":"8.09E-28"},"full_name=putative indole-3-acetic acid-amido synthetase GH3.9. putative indole-3-acetic acid-amido synthetase GH3.9. Encodes GH3.9, a member of the GH3 family auxin-responsive genes. gh3.9-1 mutants had greater primary root length, increased sensitivity to indole-3-acetic acid (IAA)-mediated root growth inhibition, but no obvious effects on apical dominance or leaf morphology.","AT2G28800","ALB3",671.55,1.6036,0.11532,13.906,{"v":5.79e-44,"d":"5.79E-44"},{"v":3.3e-42,"d":"3.30E-42"},"full_name=ALBINO 3. 63 kDa inner membrane family protein. member of Chloroplast membrane protein ALBINO3 family. Similar to pea PPF1 and may play a role in plant senescence.","AT2G02710","PLPB",2770.4,0.68086,0.064071,10.627,2.24E-26,1.24E-24,"full_name=PAS/LOV protein B. PAS/LOV protein B. Encodes a putative blue light receptor protein."]
["AT3G21530",null,122.34,-2.419,0.23027,-10.505,{"v":8.19e-26,"d":"8.19E-26"},{"v":5.12e-24,"d":"5.12E-24"},"DNAse I-like superfamily protein.","AT4G28190","ULT1",101.49,-2.9657,0.27205,-10.901,{"v":1.14e-27,"d":"1.14E-27"},{"v":6.87e-26,"d":"6.87E-26"},"full_name=ULTRAPETALA1. Developmental regulator, ULTRAPETALA. Encodes a novel Cys-rich protein with a B-box like domain that acts as a negative regulator of meristem cell accumulation in inflorescence and floral meristems as loss-of-function ult1 mutations cause inflorescence meristem enlargement, the production of extra flowers and floral organs, and a decrease in floral meristem determinacy. Acts opposite to CLF which represses AG, but preventing deposition of CLF repressive methylation marks.","AT3G09390","MT2A",2351,1.4372,0.12735,11.285,{"v":1.55e-29,"d":"1.55E-29"},{"v":9.1e-28,"d":"9.10E-28"},"full_name=metallothionein 2A. metallothionein 2A. metallothionein, binds to and detoxifies excess copper and other metals, limiting oxidative damage","AT2G17230","EXL5",278.17,-3.4289,0.24661,-13.904,{"v":5.95e-44,"d":"5.95E-44"},{"v":3.38e-42,"d":"3.38E-42"},"full_name=EXORDIUM like 5. EXORDIUM like 5.","AT5G55135",null,2092.4,-1.2231,0.11558,-10.583,{"v":3.59e-26,"d":"3.59E-26"},{"v":1.98e-24,"d":"1.98E-24"},"hypothetical protein."]
["AT3G57020",null,897.87,1.9364,0.1845,10.496,{"v":9.06e-26,"d":"9.06E-26"},{"v":5.64e-24,"d":"5.64E-24"},"Calcium-dependent phosphotriesterase superfamily protein.","AT3G22490","ATRAB28",78.007,3.3757,0.31017,10.883,1.38E-27,{"v":8.34e-26,"d":"8.34E-26"},"Seed maturation protein.","AT1G62333",null,968.5,-2.0041,0.178,-11.259,{"v":2.09e-29,"d":"2.09E-29"},1.22E-27,"hypothetical protein.","AT1G78040",null,567.45,-2.0135,0.14484,-13.902,{"v":6.17e-44,"d":"6.17E-44"},3.49E-42,"Pollen Ole e 1 allergen and extensin family protein.","AT4G27070","TSB2",1776.3,-0.78448,0.074254,-10.565,{"v":4.34e-26,"d":"4.34E-26"},{"v":2.39e-24,"d":"2.39E-24"},"full_name=tryptophan synthase beta-subunit 2. tryptophan synthase beta-subunit 2. Tryptophan synthase beta. Expressed at low levels in all tissues."]
["AT2G26500",null,290.97,-2.2057,0.21019,-10.494,{"v":9.21e-26,"d":"9.21E-26"},{"v":5.71e-24,"d":"5.71E-24"},"cytochrome b6f complex subunit (petM).","AT2G35780","scpl26",167.22,-1.991,0.18295,-10.883,{"v":1.39e-27,"d":"1.39E-27"},{"v":8.35e-26,"d":"8.35E-26"},"full_name=serine carboxypeptidase-like 26. serine carboxypeptidase-like 26.","AT3G10200",null,384.95,-1.9523,0.1736,-11.246,{"v":2.43e-29,"d":"2.43E-29"},{"v":1.41e-27,"d":"1.41E-27"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT4G17730","SYP23",440.61,1.6813,0.12106,13.888,{"v":7.5e-44,"d":"7.50E-44"},{"v":4.23e-42,"d":"4.23E-42"},"full_name=syntaxin of plants 23. syntaxin of plants 23. member of SYP2 Gene Family","AT3G25870",null,624.87,1.1932,0.113,10.559,{"v":4.64e-26,"d":"4.64E-26"},{"v":2.54e-24,"d":"2.54E-24"},"hypothetical protein."]
["AT4G24110",null,1280.6,1.6029,0.15306,10.472,{"v":1.16e-25,"d":"1.16E-25"},{"v":7.2e-24,"d":"7.20E-24"},"NADP-specific glutamate dehydrogenase.","AT1G31812","ACBP6",927.57,-1.161,0.1067,-10.881,1.43E-27,{"v":8.54e-26,"d":"8.54E-26"},"full_name=acyl-CoA-binding protein 6. acyl-CoA-binding protein 6. Acyl-CoA-binding protein. Bind acyl-CoA esters and protect acyl-CoAs from degradation by microsomal acyl-hydrolases.","AT1G31812","ACBP6",304.39,-2.0194,0.17961,-11.243,{"v":2.49e-29,"d":"2.49E-29"},1.45E-27,"full_name=acyl-CoA-binding protein 6. acyl-CoA-binding protein 6. Acyl-CoA-binding protein. Bind acyl-CoA esters and protect acyl-CoAs from degradation by microsomal acyl-hydrolases.","AT2G22430","HB6",294.91,-2.2802,0.16428,-13.88,{"v":8.35e-44,"d":"8.35E-44"},{"v":4.68e-42,"d":"4.68E-42"},"full_name=homeobox protein 6. homeobox protein 6. Encodes a homeodomain leucine zipper class I (HD-Zip I) protein that is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis.","AT5G41210","GSTT1",1229.1,-0.85098,0.080603,-10.558,4.68E-26,{"v":2.56e-24,"d":"2.56E-24"},"full_name=glutathione S-transferase THETA 1. glutathione S-transferase THETA 1. Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002)."]
["AT1G60000",null,143.11,-2.2931,0.21972,-10.436,1.69E-25,1.04E-23,"RNA-binding (RRM/RBD/RNP motifs) family protein.","AT4G24620","PGI1",537.78,-1.4409,0.13251,-10.874,1.54E-27,{"v":9.17e-26,"d":"9.17E-26"},"full_name=phosphoglucose isomerase 1. phosphoglucose isomerase 1. The PGI1 gene encodes the plastid phospho-glucose (Glc) isomerase. While pgi1-1 mutant has a deficiency in leaf starch synthesis, it accumulates starch in root cap cells. Flowering time of the pgi1-1 mutant is significantly delayed under short-day conditions.","AT5G55480","SVL1",203.62,-1.978,0.1761,-11.233,{"v":2.82e-29,"d":"2.82E-29"},{"v":1.63e-27,"d":"1.63E-27"},"full_name=SHV3-like 1. SHV3-like 1. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development.","AT4G25170",null,3164.9,1.7238,0.12435,13.862,1.08E-43,{"v":6.03e-42,"d":"6.03E-42"},"Uncharacterized conserved protein (UCP012943).","AT3G14330","CREF3",810.84,1.1875,0.11259,10.547,5.26E-26,2.87E-24,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT2G19930",null,275.76,1.7972,0.17221,10.436,1.69E-25,1.04E-23,"RNA-dependent RNA polymerase family protein.","AT1G65930","cICDH",1807.2,-0.97745,0.090077,-10.851,1.97E-27,{"v":1.17e-25,"d":"1.17E-25"},"full_name=cytosolic NADP+-dependent isocitrate dehydrogenase. cytosolic NADP+-dependent isocitrate dehydrogenase. Encodes a NADP+-isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses.","AT5G44360","ATBBE23",601.48,-1.2958,0.11544,-11.225,{"v":3.08e-29,"d":"3.08E-29"},{"v":1.78e-27,"d":"1.78E-27"},"FAD-binding Berberine family protein.","AT4G28520","CRU3",798890,-2.354,0.1699,-13.856,{"v":1.18e-43,"d":"1.18E-43"},{"v":6.56e-42,"d":"6.56E-42"},"full_name=cruciferin 3. cruciferin 3. Encodes a 12S seed storage protein that is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT5G03210","DIP2",346.56,-1.6702,0.15844,-10.542,{"v":5.55e-26,"d":"5.55E-26"},{"v":3.02e-24,"d":"3.02E-24"},"full_name=DBP-interacting protein 2. E3 ubiquitin-protein ligase. Encodes a small polypeptide contributing to resistance to potyvirus."]
["AT4G24275",null,170.83,1.9711,0.18951,10.401,{"v":2.46e-25,"d":"2.46E-25"},{"v":1.5E-23,"d":"1.50E-23"},"hypothetical protein. Identified as a screen for stress-responsive genes.","AT4G11810","PHT5;2",194.89,-1.9427,0.17921,-10.84,2.22E-27,1.31E-25,"Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein.","AT2G32210","ATHCYSTM6",207.43,2.1805,0.19459,11.206,{"v":3.82e-29,"d":"3.82E-29"},2.19E-27,"cysteine-rich/transmembrane domain A-like protein.","AT2G34250",null,1302.9,-1.3218,0.095473,-13.845,1.37E-43,{"v":7.61e-42,"d":"7.61E-42"},"SecY protein transport family protein.","AT1G11175",null,579.74,1.395,0.13244,10.533,6.07E-26,{"v":3.29e-24,"d":"3.29E-24"},"other_RNA."]
["AT4G14960","TUA6",1251.2,-1.1477,0.11044,-10.392,{"v":2.69e-25,"d":"2.69E-25"},{"v":1.64e-23,"d":"1.64E-23"},"full_name=Tubulin alpha-6. Tubulin/FtsZ family protein. Encodes an alpha-tubulin isoform required for right handed helical growth.","AT4G14770","TCX2",78.668,-4.2099,0.38842,-10.838,2.26E-27,{"v":1.34e-25,"d":"1.34E-25"},"full_name=TESMIN/TSO1-like CXC 2. TESMIN/TSO1-like CXC 2.","AT4G30935","WRKY32",841.42,1.4816,0.13233,11.196,{"v":4.26e-29,"d":"4.26E-29"},2.44E-27,"full_name=WRKY DNA-binding protein 32. WRKY DNA-binding protein 32. member of WRKY Transcription Factor; Group I","AT1G72150","PATL1",184.68,-4.488,0.32448,-13.832,1.64E-43,{"v":9.1e-42,"d":"9.10E-42"},"full_name=PATELLIN 1. PATELLIN 1. novel cell-plate-associated protein that is related in sequence to proteins involved in membrane trafficking in other eukaryotes","AT1G70800","EHB1",981.93,-0.91328,0.086805,-10.521,6.91E-26,{"v":3.73e-24,"d":"3.73E-24"},"full_name=ENHANCED BENDING 1. Calcium-dependent lipid-binding (CaLB domain) family protein. Encodes a novel NPH3/phototropin binding factor with a calcium binding domain that negatively affects hypocotyl bending under blue light conditions in Arabidopsis thaliana and may regulate phototropism."]
["AT2G47400","CP12-1",1046.2,-1.0802,0.10434,-10.353,4.05E-25,{"v":2.46e-23,"d":"2.46E-23"},"full_name=CP12 domain-containing protein 1. CP12 domain-containing protein 1. CP12-1 encodes a small peptide found in the chloroplast stroma. It belongs to the CP12 gene family thought to be involved in the formation of a supramolecular complex with glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK) embedded in the Calvin cycle.","AT1G22590","AGL87",145.67,-2.1725,0.20059,-10.831,2.47E-27,1.45E-25,"full_name=AGAMOUS-like 87. AGAMOUS-like 87.","AT2G27040","AGO4",2146.2,-1.3417,0.11996,-11.185,{"v":4.85e-29,"d":"4.85E-29"},{"v":2.77e-27,"d":"2.77E-27"},"full_name=ARGONAUTE 4. Argonaute family protein. AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.","AT3G44310","NIT1",477.9,1.9723,0.14264,13.827,1.75E-43,{"v":9.67e-42,"d":"9.67E-42"},"full_name=nitrilase 1. nitrilase 1. Mutants are resistant to indole-3-acetonitrile (IAN). NIT1 catalyzes the terminal activation step in indole-acetic acid biosynthesis. Predominantly expressed isoform of nitrilase isoenzyme family. Aggregation of NIT1 in cells directly abutting wound sites is one of the earliest events associated with wound and herbicide-induced cell death. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. It is also involved in the conversion of IAN to IAM (indole-3-acetamide) and other non-auxin-related metabolic processes.","AT5G17050","UGT78D2",369.81,1.3172,0.12532,10.51,{"v":7.76e-26,"d":"7.76E-26"},{"v":4.17e-24,"d":"4.17E-24"},"full_name=UDP-glucosyl transferase 78D2. UDP-glucosyl transferase 78D2. The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates."]
["AT5G49360","BXL1",356.93,-1.8803,0.18178,-10.344,{"v":4.47e-25,"d":"4.47E-25"},{"v":2.7e-23,"d":"2.70E-23"},"full_name=beta-xylosidase 1. beta-xylosidase 1. Encodes a bifunctional {beta}-D-xylosidase/{alpha}-L-arabinofuranosidase required for pectic arabinan modification. Located in the extracellular matrix. Gene is expressed specifically in tissues undergoing secondary wall thickening. This is a member of glycosyl hydrolase family 3 and has six other closely related members.","AT5G05270","CHIL",90.307,-2.9846,0.27564,-10.828,2.55E-27,{"v":1.49e-25,"d":"1.49E-25"},"full_name=chalcone isomerase like. Chalcone-flavanone isomerase family protein.","AT1G09970","LRR XI-23",1158.6,1.3199,0.1181,11.177,{"v":5.31e-29,"d":"5.31E-29"},{"v":3.02e-27,"d":"3.02E-27"},"Leucine-rich receptor-like protein kinase family protein. RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress.","AT5G13180","NAC083",180.38,-3.5693,0.25838,-13.814,{"v":2.1e-43,"d":"2.10E-43"},{"v":1.15e-41,"d":"1.15E-41"},"full_name=NAC domain containing protein 83. NAC domain containing protein 83. Encodes a NAC domain transcription factor that interacts with VND7 and negatively regulates xylem vessel formation.","AT2G07080",null,146.95,-2.1372,0.20372,-10.491,{"v":9.49e-26,"d":"9.49E-26"},{"v":5.09e-24,"d":"5.09E-24"},"transposable_element_gene."]
["AT1G07430","HAI2",99.553,2.6586,0.25703,10.344,{"v":4.47e-25,"d":"4.47E-25"},{"v":2.7e-23,"d":"2.70E-23"},"full_name=highly ABA-induced PP2C gene 2. highly ABA-induced PP2C protein 2. Encodes a member of the group A protein phosphatase 2C (PP2C) family that is responsible for negatively regulating seed dormancy.","AT4G37550","IAMH1",237.49,-1.6843,0.15566,-10.821,{"v":2.75e-27,"d":"2.75E-27"},1.61E-25,"Acetamidase/Formamidase family protein.","AT3G19680",null,465.04,-2.1755,0.19481,-11.167,{"v":5.89e-29,"d":"5.89E-29"},{"v":3.34e-27,"d":"3.34E-27"},"hypothetical protein (DUF1005).","AT4G07960","CSLC12",146.81,-2.9917,0.21671,-13.806,{"v":2.36e-43,"d":"2.36E-43"},{"v":1.29e-41,"d":"1.29E-41"},"full_name=Cellulose-synthase-like C12. Cellulose-synthase-like C12. encodes a gene similar to cellulose synthase","AT1G11840","GLX1",2980.3,-0.79556,0.07584,-10.49,{"v":9.62e-26,"d":"9.62E-26"},{"v":5.14e-24,"d":"5.14E-24"},"full_name=glyoxalase I homolog. glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein. Encodes a glyoxalase I homolog ATGLX1."]
["AT4G26580",null,184.24,-1.8663,0.18066,-10.33,{"v":5.16e-25,"d":"5.16E-25"},{"v":3.1e-23,"d":"3.10E-23"},"RING/U-box superfamily protein.","AT1G12200","FMO",183.07,-1.9662,0.18267,-10.764,{"v":5.11e-27,"d":"5.11E-27"},{"v":2.98e-25,"d":"2.98E-25"},"full_name=flavin monooxygenase. Flavin-binding monooxygenase family protein. Putative flavin monooxygenase.","AT2G24230",null,128.49,-2.8004,0.25103,-11.156,{"v":6.73e-29,"d":"6.73E-29"},{"v":3.8E-27,"d":"3.80E-27"},"Leucine-rich repeat protein kinase family protein.","AT1G74210","GDPD5",171.01,-2.6459,0.19184,-13.792,{"v":2.84e-43,"d":"2.84E-43"},1.55E-41,"full_name=glycerophosphodiester phosphodiesterase 5. PLC-like phosphodiesterases superfamily protein. Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family.","AT1G43670","FBP",1408.1,0.92593,0.088407,10.474,1.14E-25,{"v":6.08e-24,"d":"6.08E-24"},"full_name=fructose-1,6-bisphosphatase. Inositol monophosphatase family protein. Encodes a fructose-1,6-bisphosphatase. This enzyme, in addition to catalyzing the formation of fructose-6-phosphate for sucrose biosynthesis, appears to play a role in fructose-mediated signaling that is independent of its enzymatic activity. atcfbp-1/fins1 mutants have reduced photosynthetic rates, elevated levels of starch and reduced levels of sucrose during the day. Although the protein is expected to be cytosolic, a GFP-tagged version localizes to the cytoplasm and the nucleus."]
["AT1G30220","INT2",261.81,-1.5199,0.14781,-10.283,8.43E-25,{"v":5.05e-23,"d":"5.05E-23"},"full_name=inositol transporter 2. inositol transporter 2. Inositol transporter presenting conserved extracellular loop domains homologs of plexins/semaphorin/integrin (PSI) domains from animal type I receptors.","AT1G44760",null,72.79,-3.624,0.33707,-10.751,{"v":5.83e-27,"d":"5.83E-27"},3.39E-25,"Adenine nucleotide alpha hydrolases-like superfamily protein.","AT1G11170",null,4055.2,-1.1761,0.1056,-11.137,{"v":8.27e-29,"d":"8.27E-29"},4.66E-27,"lysine ketoglutarate reductase trans-splicing-like protein (DUF707).","AT3G10570","CYP77A6",179.83,-2.5497,0.18503,-13.78,{"v":3.37e-43,"d":"3.37E-43"},1.84E-41,"full_name=cytochrome P450, family 77, subfamily A, polypeptide 6. cytochrome P450, family 77, subfamily A, polypeptide 6. member of CYP77A","AT3G60750","TKL1",406.2,1.7383,0.16611,10.465,{"v":1.25e-25,"d":"1.25E-25"},{"v":6.64e-24,"d":"6.64E-24"},"Transketolase."]
["AT3G54050","HCEF1",78.852,-3.1551,0.30716,-10.272,{"v":9.43e-25,"d":"9.43E-25"},{"v":5.64e-23,"d":"5.64E-23"},"full_name=high cyclic electron flow 1. high cyclic electron flow 1. Encodes a chloroplastic fructose 1,6-bisphosphate phosphatase. also known as HCEF1 (High Cyclic Electron Flow 1). hcef1 mutants have constitutively elevated electron flow (CEFI) and plants with antisense suppression of this enzyme have higher levels of net leaf photosynthesis and increased sucrose biosynthesis.","AT3G17520","SSLEA",18340,1.1824,0.11003,10.746,{"v":6.19e-27,"d":"6.19E-27"},3.58E-25,"Late embryogenesis abundant protein (LEA) family protein.","AT5G01750",null,84.735,3.5775,0.32125,11.136,{"v":8.37e-29,"d":"8.37E-29"},{"v":4.7e-27,"d":"4.70E-27"},"LURP-one-like protein (DUF567).","AT1G21400",null,744.49,-1.3924,0.10112,-13.771,{"v":3.83e-43,"d":"3.83E-43"},2.08E-41,"Thiamin diphosphate-binding fold (THDP-binding) superfamily protein.","AT4G26630","DEK3",1528.4,-0.99309,0.094904,-10.464,{"v":1.26e-25,"d":"1.26E-25"},{"v":6.67e-24,"d":"6.67E-24"},"DEK domain-containing chromatin associated protein. Encodes a chromatin-associated protein that specifically binds histones H3 and H4 and contributes to modulation of Arabidopsis chromatin structure and function."]
["AT4G16620","UMAMIT8",1071.4,1.1446,0.11147,10.268,{"v":9.78e-25,"d":"9.78E-25"},{"v":5.83e-23,"d":"5.83E-23"},"full_name=Usually multiple acids move in and out Transporters 8. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT5G13690","CYL1",788.64,-1.0936,0.10178,-10.745,{"v":6.25e-27,"d":"6.25E-27"},{"v":3.61e-25,"d":"3.61E-25"},"full_name=CYCLOPS 1. alpha-N-acetylglucosaminidase family / NAGLU family. Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.","AT5G58930","OPL4",767.27,-1.4532,0.13058,-11.128,{"v":9.12e-29,"d":"9.12E-29"},{"v":5.1e-27,"d":"5.10E-27"},"hypothetical protein (DUF740).","AT3G08040","FRD3",152.25,-6.5282,0.4741,-13.77,{"v":3.88e-43,"d":"3.88E-43"},{"v":2.1e-41,"d":"2.10E-41"},"full_name=FERRIC REDUCTASE DEFECTIVE 3. MATE efflux family protein. Encodes a member of the MATE (multidrug and toxin efflux family), expressed in roots but not shoots. Mutants accumulate excess iron, manganese and zinc, and express root Fe(III) chelatase activity even under iron sufficiency conditions. FRD3 is likely to function in root xylem loading of an iron chelator or other factor necessary for efficient iron uptake out of the xylem or apoplastic space and into leaf cells.","AT2G34300",null,182.45,1.9068,0.18224,10.463,1.28E-25,{"v":6.73e-24,"d":"6.73E-24"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein."]
["AT1G03990",null,153.65,2.2754,0.22161,10.267,{"v":9.89e-25,"d":"9.89E-25"},{"v":5.87e-23,"d":"5.87E-23"},"Long-chain fatty alcohol dehydrogenase family protein.","AT5G39520","CSAP",99.93,2.7483,0.25597,10.737,{"v":6.86e-27,"d":"6.86E-27"},{"v":3.94e-25,"d":"3.94E-25"},"hypothetical protein (DUF1997).","AT3G30180","BR6OX2",256.12,-1.936,0.17401,-11.125,{"v":9.44e-29,"d":"9.44E-29"},5.27E-27,"full_name=brassinosteroid-6-oxidase 2. brassinosteroid-6-oxidase 2. Encodes a cytochrome p450 enzyme that catalyzes the last reaction in the production of brassinolide. It is capable of converting 6-deoxocastasterone into castasterone, a C-6 oxidation, as well as the further conversion of castasterone into brassinolide by a Baeyer-Villinger oxidation reaction at C-6, resulting in the formation of an unusual seven-membered lactone ring. The enzyme possesses high affinity for both C28- and C27-Brassinosteroids. The expression of the gene using a CYP85A2 promoter:LUC fusion construct was shown to be under circadian and light control.","AT2G41400",null,261.49,-7.7788,0.56608,-13.741,{"v":5.73e-43,"d":"5.73E-43"},{"v":3.09e-41,"d":"3.09E-41"},"Pollen Ole e 1 allergen and extensin family protein.","AT5G56100",null,2813.7,0.98006,0.093743,10.455,1.39E-25,{"v":7.32e-24,"d":"7.32E-24"},"glycine-rich protein / oleosin."]
["AT5G49460","ACLB-2",875.95,-1.1504,0.11209,-10.263,1.04E-24,{"v":6.13e-23,"d":"6.13E-23"},"full_name=ATP citrate lyase subunit B 2. ATP citrate lyase subunit B 2. One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL)","AT3G10200",null,1106.9,-1.0589,0.098774,-10.721,{"v":8.12e-27,"d":"8.12E-27"},{"v":4.66e-25,"d":"4.66E-25"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT3G15280",null,4600.6,2.0107,0.18094,11.112,1.09E-28,{"v":6.08e-27,"d":"6.08E-27"},"hypothetical protein.","AT3G54340","AP3",146.23,-4.3489,0.31697,-13.72,{"v":7.7e-43,"d":"7.70E-43"},{"v":4.14e-41,"d":"4.14E-41"},"full_name=APETALA 3. K-box region and MADS-box transcription factor family protein. Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies petal and stamen identities. Associates with PISTILLATA.","AT4G38740","ROC1",6284.2,-0.6517,0.062339,-10.454,{"v":1.4e-25,"d":"1.40E-25"},{"v":7.34e-24,"d":"7.34E-24"},"full_name=rotamase CYP 1. rotamase CYP 1. Encodes cytosolic cyclophilin ROC1."]
["AT1G25510",null,375.27,-1.9833,0.19384,-10.231,1.43E-24,{"v":8.46e-23,"d":"8.46E-23"},"Eukaryotic aspartyl protease family protein.","AT1G25510",null,73.515,-4.2288,0.39451,-10.719,{"v":8.26e-27,"d":"8.26E-27"},{"v":4.72e-25,"d":"4.72E-25"},"Eukaryotic aspartyl protease family protein.","AT3G49780","PSK4",317.17,-2.9315,0.26437,-11.089,1.42E-28,{"v":7.89e-27,"d":"7.89E-27"},"full_name=phytosulfokine 4 precursor. phytosulfokine 4 precursor. Phytosulfokine 3 precursor, coding for a unique plant peptide growth factor. Plants overexpressing this gene (under a 35S promoter), develop normal cotyledons and hypocotyls but their growth, in particular that of their roots, was faster than that of wildtype.","AT3G25110","FaTA",127.06,-3.9805,0.29036,-13.709,{"v":8.97e-43,"d":"8.97E-43"},{"v":4.8e-41,"d":"4.80E-41"},"full_name=fatA acyl-ACP thioesterase. fatA acyl-ACP thioesterase. Encodes a FatA acyl-ACP thioesterase","AT2G38560","TFIIS",755.22,1.1255,0.10775,10.446,1.53E-25,{"v":8.01e-24,"d":"8.01E-24"},"full_name=transcript elongation factor IIS. transcript elongation factor IIS. Encodes RNA polymerase II transcript elongation factor TFIIS. Complements yeast TFIIS mutation. Mutant plants display essentially normal development, but they flower slightly earlier than the wild type and show clearly reduced seed dormancy."]
["AT5G49190","SUS2",13826,-1.0005,0.097789,-10.231,1.44E-24,{"v":8.49e-23,"d":"8.49E-23"},"full_name=sucrose synthase 2. sucrose synthase 2. Encodes a sucrose synthase (SUS2). The activity of the enzyme could not be assayed as proved to be insoluble (PMID 17257168). However, analyses of an sus2 mutant revealed a deficiency in sucrose synthase activity 12 and 15 days after flowering. There are some reports that SUS2 transcript levels are increased in leaves specifically by O(2) deficiency whereas other reports indicate that SUS2 is expressed only in seeds. Immulocalization shows that SUS2 is present in the cytosol of developing seeds, but, it also associated with plastids, though not located within them.","AT5G37690",null,96.033,-2.7762,0.25932,-10.706,{"v":9.59e-27,"d":"9.59E-27"},{"v":5.46e-25,"d":"5.46E-25"},"SGNH hydrolase-type esterase superfamily protein.","AT2G22670","IAA8",617.52,-1.7578,0.15877,-11.071,{"v":1.73e-28,"d":"1.73E-28"},{"v":9.53e-27,"d":"9.53E-27"},"full_name=indoleacetic acid-induced protein 8. indoleacetic acid-induced protein 8. Encodes a transcriptional repressor of the auxin response that is auxin inducible and is involved in lateral root formation.","AT1G04310","ERS2",368.85,-1.7854,0.13029,-13.703,{"v":9.75e-43,"d":"9.75E-43"},{"v":5.2e-41,"d":"5.20E-41"},"full_name=ethylene response sensor 2. ethylene response sensor 2. encodes an ethylene receptor related to bacterial two-component histidine kinases.","AT3G15500","NAC3",79.337,-3.7842,0.36245,-10.441,1.62E-25,{"v":8.41e-24,"d":"8.41E-24"},"full_name=NAC domain containing protein 3. NAC domain containing protein 3. Encodes an ATAF-like NAC-domain transcription factor that doesn't contain C-terminal sequences shared by CUC1, CUC2 and NAM. Note: this protein (AtNAC3) is not to be confused with the protein encoded by locus AT3G29035, which, on occasion, has also been referred to as AtNAC3."]
["AT1G60950","FED A",863.09,-1.2768,0.12486,-10.226,{"v":1.52e-24,"d":"1.52E-24"},{"v":8.9e-23,"d":"8.90E-23"},"2Fe-2S ferredoxin-like superfamily protein. encodes a major leaf ferredoxin","AT3G02610","AAD2",209.08,-2.0888,0.19535,-10.693,{"v":1.1E-26,"d":"1.10E-26"},{"v":6.26e-25,"d":"6.26E-25"},"plant stearoyl-acyl-carrier desaturase family protein.","AT2G36770",null,157.94,2.6991,0.24422,11.052,2.15E-28,1.18E-26,"UDP-Glycosyltransferase superfamily protein.","AT4G04460","PASPA3",311.84,-8.4513,0.61677,-13.702,{"v":9.81e-43,"d":"9.81E-43"},{"v":5.22e-41,"d":"5.22E-41"},"Saposin-like aspartyl protease family protein.","AT2G41220","GLU2",1280,-0.80314,0.076941,-10.438,{"v":1.66e-25,"d":"1.66E-25"},{"v":8.59e-24,"d":"8.59E-24"},"full_name=glutamate synthase 2. glutamate synthase 2. Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression is most abundant in root."]
["AT2G02990","RNS1",1367.3,1.5414,0.15129,10.188,{"v":2.24e-24,"d":"2.24E-24"},{"v":1.31e-22,"d":"1.31E-22"},"full_name=ribonuclease 1. ribonuclease 1. Encodes a member of the ribonuclease T2 family that responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in roots.","AT2G39420","MAGL8",196.46,1.9113,0.17881,10.689,1.15E-26,6.48E-25,"alpha/beta-Hydrolases superfamily protein.","AT5G58650","PSY1",190.88,2.3193,0.21027,11.03,{"v":2.74e-28,"d":"2.74E-28"},{"v":1.5e-26,"d":"1.50E-26"},"full_name=plant peptide containing sulfated tyrosine 1. plant peptide containing sulfated tyrosine 1. Encodes PSY1, an18-aa tyrosine-sulfated glycopeptide that promotes cellular proliferation and expansion. PSY1 is widely expressed in various tissues, including shoot apical meristem, and is highly up-regulated by wounding. Perception of PSY1 depends on At1g72300, a leucine-rich repeat receptor kinase (LRR-RK).","AT1G21680",null,835.07,1.4029,0.10267,13.665,{"v":1.65e-42,"d":"1.65E-42"},{"v":8.76e-41,"d":"8.76E-41"},"DPP6 N-terminal domain-like protein.","AT4G36195",null,1709.5,-0.98341,0.094261,-10.433,{"v":1.76e-25,"d":"1.76E-25"},{"v":9.08e-24,"d":"9.08E-24"},"Serine carboxypeptidase S28 family protein."]
["AT1G69410","ELF5A-3",2588.8,0.99172,0.097508,10.171,{"v":2.68e-24,"d":"2.68E-24"},1.56E-22,"full_name=eukaryotic elongation factor 5A-3. eukaryotic elongation factor 5A-3. Encodes eIF5A-2, a putative eukaryotic translation initiation factor. There are three eIF5A coding genes in Arabidopsis: eIF5A-1/At1g13950, eIF5A-2/At1g26630 and eIF5A-3/At1g69410.","AT5G63030","GRXC1",2630.8,1.0962,0.10259,10.685,{"v":1.19e-26,"d":"1.19E-26"},{"v":6.73e-25,"d":"6.73E-25"},"full_name=glutaredoxin C1. Thioredoxin superfamily protein.","AT5G05410","DREB2A",304.67,2.2563,0.20458,11.029,{"v":2.78e-28,"d":"2.78E-28"},1.52E-26,"full_name=DRE-binding protein 2A. DRE-binding protein 2A. Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress%E2%80%93inducible genes.","AT1G52890","NAC019",330.15,-2.1601,0.15819,-13.655,1.88E-42,{"v":9.94e-41,"d":"9.94E-41"},"full_name=NAC domain containing protein 19. NAC domain containing protein 19. encodes a NAC transcription factor whose expression is induced by drought, high salt, and abscisic acid. This gene binds to ERD1 promoter in vitro.","AT1G63800","UBC5",437.7,-1.1838,0.11384,-10.399,{"v":2.51e-25,"d":"2.51E-25"},{"v":1.29e-23,"d":"1.29E-23"},"full_name=ubiquitin-conjugating enzyme 5. ubiquitin-conjugating enzyme 5."]
["AT3G55800","SBPASE",647.7,-1.2213,0.12011,-10.169,2.74E-24,1.59E-22,"full_name=sedoheptulose-bisphosphatase. sedoheptulose-bisphosphatase. Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type.","AT3G54920","PMR6",73.213,-3.44,0.32222,-10.676,1.32E-26,{"v":7.42e-25,"d":"7.42E-25"},"full_name=powdery mildew resistant 6. Pectin lyase-like superfamily protein. Powdery mildew resistant mutant encodes a pectate lyase-like protein","AT5G02750","SGR9",449.71,1.4015,0.12746,10.996,{"v":4e-28,"d":"4.00E-28"},{"v":2.18e-26,"d":"2.18E-26"},"full_name=SHOOT GRAVITROPISM 9. RING/U-box superfamily protein. Encodes an E3 ligase, SHOOT GRAVITROPISM9. Modulates the interaction between statoliths and F-Actin in gravity sensing.","AT2G46240","BAG6",1136,1.4134,0.10357,13.647,{"v":2.11e-42,"d":"2.11E-42"},1.11E-40,"full_name=BCL-2-associated athanogene 6. BCL-2-associated athanogene 6. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Expression of BAG6 in leaves was strongly induced by heat stress. Knockout mutants exhibited enhanced susceptibility to fungal pathogen Botrytis cinerea. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.","AT5G02580",null,395.03,-1.3049,0.12551,-10.397,{"v":2.57e-25,"d":"2.57E-25"},{"v":1.32e-23,"d":"1.32E-23"},"argininosuccinate lyase."]
["AT5G66190","FNR1",2103.3,-1.0058,0.099037,-10.155,{"v":3.14e-24,"d":"3.14E-24"},{"v":1.81e-22,"d":"1.81E-22"},"full_name=ferredoxin-NADP(+)-oxidoreductase 1. ferredoxin-NADP[+]-oxidoreductase 1. Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the thylakoid. The affinity of this enzyme for ferredoxin is slightly, but significantly, higher than AtLFNR2, an isoform of the same enzyme. AtLFNR1 forms a heterodimer with AtFNR2 and is also a prerequisite to attach AtFNR2 to the thylakoid membrane.","AT3G14680","CYP72A14",221.76,2.029,0.19021,10.667,{"v":1.45e-26,"d":"1.45E-26"},{"v":8.14e-25,"d":"8.14E-25"},"full_name=cytochrome P450, family 72, subfamily A, polypeptide 14. cytochrome P450, family 72, subfamily A, polypeptide 14. putative cytochrome P450","AT1G75490",null,2629.2,1.3369,0.12179,10.977,{"v":4.96e-28,"d":"4.96E-28"},{"v":2.69e-26,"d":"2.69E-26"},"Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.","AT3G63490","EMB3126",626.98,1.538,0.11291,13.621,{"v":2.99e-42,"d":"2.99E-42"},{"v":1.57e-40,"d":"1.57E-40"},"full_name=EMBRYO DEFECTIVE 3126. Ribosomal protein L1p/L10e family.","AT1G68670","HHO2",162.92,2.825,0.27219,10.379,{"v":3.1e-25,"d":"3.10E-25"},{"v":1.59e-23,"d":"1.59E-23"},"myb-like transcription factor family protein."]
["AT1G76990","ACR3",1466.8,1.1697,0.11524,10.15,{"v":3.31e-24,"d":"3.31E-24"},1.91E-22,"full_name=ACT domain repeat 3. ACT domain repeat 3.","AT3G26060","PRXQ",875.38,-1.3316,0.12512,-10.643,{"v":1.88e-26,"d":"1.88E-26"},1.05E-24,"full_name=peroxiredoxin Q. Thioredoxin superfamily protein. encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus","AT2G29380","HAI3",242.39,1.8879,0.17204,10.974,{"v":5.11e-28,"d":"5.11E-28"},{"v":2.77e-26,"d":"2.77E-26"},"full_name=highly ABA-induced PP2C gene 3. highly ABA-induced PP2C protein 3.","AT2G25540","CESA10",163.91,-6.6358,0.48728,-13.618,3.12E-42,{"v":1.64e-40,"d":"1.64E-40"},"full_name=cellulose synthase 10. cellulose synthase A catalytic subunit 3 UDP-forming-like protein. cellulose synthase","AT4G32440",null,197.91,-1.9753,0.19037,-10.376,{"v":3.19e-25,"d":"3.19E-25"},1.63E-23,"Plant Tudor-like RNA-binding protein."]
["AT1G67090","RBCS1A",11323,-1.1455,0.11286,-10.15,{"v":3.32e-24,"d":"3.32E-24"},1.91E-22,"full_name=ribulose bisphosphate carboxylase small chain 1A. ribulose bisphosphate carboxylase small chain 1A. Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410). Functions to yield sufficient Rubisco content for leaf photosynthetic capacity.","AT3G12580","HSP70",4863,1.4623,0.13748,10.636,2.03E-26,{"v":1.13e-24,"d":"1.13E-24"},"full_name=heat shock protein 70. heat shock protein 70.","AT5G16240","AAD1",635.42,-2.162,0.19702,-10.974,{"v":5.12e-28,"d":"5.12E-28"},{"v":2.77e-26,"d":"2.77E-26"},"Plant stearoyl-acyl-carrier-protein desaturase family protein.","AT4G31590","CSLC5",2463.6,-1.7472,0.12834,-13.613,{"v":3.33e-42,"d":"3.33E-42"},1.74E-40,"full_name=Cellulose-synthase-like C5. Cellulose-synthase-like C5. encodes a gene similar to cellulose synthase","AT5G06755",null,129.02,3.5538,0.34253,10.375,{"v":3.21e-25,"d":"3.21E-25"},1.63E-23,"hypothetical protein."]
["AT3G60750","TKL1",3012.2,-1.1872,0.11706,-10.141,3.62E-24,2.08E-22,"Transketolase.","AT2G21720",null,1944.5,1.0007,0.094092,10.635,{"v":2.05e-26,"d":"2.05E-26"},{"v":1.14e-24,"d":"1.14E-24"},"ArgH (DUF639).","AT2G35470",null,78.486,-3.8642,0.35226,-10.97,{"v":5.35e-28,"d":"5.35E-28"},{"v":2.88e-26,"d":"2.88E-26"},"ribosome maturation factor.","AT3G58680","MBF1B",3304.1,1.2527,0.092057,13.608,3.59E-42,{"v":1.87e-40,"d":"1.87E-40"},"full_name=multiprotein bridging factor 1B. multiprotein bridging factor 1B. One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated.","AT1G07430","HAI2",896.27,-1.2422,0.11986,-10.364,{"v":3.63e-25,"d":"3.63E-25"},{"v":1.84e-23,"d":"1.84E-23"},"full_name=highly ABA-induced PP2C gene 2. highly ABA-induced PP2C protein 2. Encodes a member of the group A protein phosphatase 2C (PP2C) family that is responsible for negatively regulating seed dormancy."]
["AT1G11190","BFN1",241.99,1.9325,0.1908,10.129,{"v":4.13e-24,"d":"4.13E-24"},{"v":2.36e-22,"d":"2.36E-22"},"full_name=bifunctional nuclease i. bifunctional nuclease i. Encodes a bifunctional nuclease that acts on both RNA and DNA involved in nucleic acid degradation to facilitate nucleotide and phosphate recovery during senescence. It has mismatch-specific endonuclease activity with wide recognition of single base mismatches as well as the ability to cleave indel types of mismatches (heteroduplexes with loops).","AT2G16890",null,562.09,1.2872,0.12107,10.632,2.12E-26,1.17E-24,"UDP-Glycosyltransferase superfamily protein.","AT3G25860","LTA2",125.9,-2.6695,0.24425,-10.929,{"v":8.36e-28,"d":"8.36E-28"},{"v":4.49e-26,"d":"4.49E-26"},"2-oxoacid dehydrogenases acyltransferase family protein. Nuclear encoded dihydrolipoamide S-acetyltransferase (LTA2) that encodes teh Pyruvate Decarboxylase E2 subunit. Mutant has embryo defect.","AT4G26200","ACS7",236.66,-4.1985,0.30891,-13.591,4.53E-42,2.35E-40,"full_name=1-amino-cyclopropane-1-carboxylate synthase 7. 1-amino-cyclopropane-1-carboxylate synthase 7. Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.","AT5G54170",null,1694.8,0.87816,0.08475,10.362,{"v":3.7e-25,"d":"3.70E-25"},{"v":1.87e-23,"d":"1.87E-23"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein."]
["AT4G15560","CLA1",1090.8,-1.0234,0.10109,-10.123,{"v":4.36e-24,"d":"4.36E-24"},{"v":2.48e-22,"d":"2.48E-22"},"full_name=CLOROPLASTOS ALTERADOS 1. Deoxyxylulose-5-phosphate synthase. Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis","AT5G53895",null,127.23,2.7424,0.25808,10.626,{"v":2.25e-26,"d":"2.25E-26"},1.24E-24,"hypothetical protein.","AT5G38160",null,410.03,-1.8738,0.17151,-10.925,{"v":8.75e-28,"d":"8.75E-28"},4.68E-26,"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT1G30070",null,1583.2,1.3907,0.10234,13.589,{"v":4.67e-42,"d":"4.67E-42"},{"v":2.41e-40,"d":"2.41E-40"},"SGS domain-containing protein.","AT5G11500",null,1342.3,-0.83793,0.080892,-10.359,{"v":3.82e-25,"d":"3.82E-25"},{"v":1.93e-23,"d":"1.93E-23"},"coiled-coil protein."]
["AT3G15570",null,87.752,-3.0882,0.30523,-10.118,{"v":4.61e-24,"d":"4.61E-24"},{"v":2.62e-22,"d":"2.62E-22"},"Phototropic-responsive NPH3 family protein.","AT1G14520","MIOX1",1013,1.2869,0.1212,10.618,{"v":2.46e-26,"d":"2.46E-26"},1.35E-24,"full_name=myo-inositol oxygenase 1. myo-inositol oxygenase 1. Encodes MIOX1. Belongs to myo-inositol oxygenase gene family.","AT1G76290",null,171.78,-2.5147,0.23048,-10.91,{"v":1.03e-27,"d":"1.03E-27"},{"v":5.49e-26,"d":"5.49E-26"},"AMP-dependent synthetase and ligase family protein.","AT1G62620",null,210.99,-2.6102,0.19209,-13.589,{"v":4.68e-42,"d":"4.68E-42"},{"v":2.41e-40,"d":"2.41E-40"},"Flavin-binding monooxygenase family protein.","AT5G14040","PHT3;1",212.1,1.729,0.16699,10.354,{"v":4.02e-25,"d":"4.02E-25"},2.02E-23,"full_name=phosphate transporter 3;1. phosphate transporter 3;1. Encodes a mitochondrial phosphate transporter. Modulates plant responses to salt stress."]
["AT3G17040","HCF107",149.11,-2.0008,0.19779,-10.116,{"v":4.72e-24,"d":"4.72E-24"},{"v":2.67e-22,"d":"2.67E-22"},"full_name=high chlorophyll fluorescent 107. high chlorophyll fluorescent 107. It is a RNA tetratricopeptide repeat-containing protein required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. Localizes to the chloroplast membrane. Involved in regulating plastidial gene expression and biogenesis. It binds in the psbT?psbH intercistronic region and blocks the progression of 5&#8242; &#8594; 3&#8242; exoribonucleases, which defines the 5&#8242; end of processed psbH transcripts and also stabilizes the downstream RNA segment. In addition, HCF107 binding remodels the structure of the psbH 5&#8242; UTR in a way that can account for its ability to enhance psbH translation.","AT1G76550",null,374.93,-1.446,0.13654,-10.591,{"v":3.29e-26,"d":"3.29E-26"},{"v":1.8E-24,"d":"1.80E-24"},"Phosphofructokinase family protein.","AT5G62480","GSTU9",315.63,1.8229,0.16711,10.908,{"v":1.05e-27,"d":"1.05E-27"},{"v":5.59e-26,"d":"5.59E-26"},"full_name=glutathione S-transferase tau 9. glutathione S-transferase tau 9. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","AT4G27520","ENODL2",116.65,-5.6831,0.41868,-13.574,{"v":5.72e-42,"d":"5.72E-42"},{"v":2.94e-40,"d":"2.94E-40"},"full_name=early nodulin-like protein 2. early nodulin-like protein 2.","AT2G23090",null,2263.8,-0.67527,0.06525,-10.349,4.23E-25,{"v":2.12e-23,"d":"2.12E-23"},"Uncharacterized protein family SERF."]
["AT1G76100","PETE1",70.159,-5.4682,0.54066,-10.114,4.79E-24,{"v":2.7e-22,"d":"2.70E-22"},"full_name=plastocyanin 1. plastocyanin 1. One of two Arabidopsis plastocyanin genes. Expressed at 1/10th level of PETE2. Does not respond to increased copper levels and is thought to be the isoform that participates in electron transport under copper-limiting conditions. Mutation of this gene does not have obvious effect on photosynthesis.","AT5G14880","KUP8",370.14,-1.395,0.13193,-10.574,{"v":3.95e-26,"d":"3.95E-26"},{"v":2.16e-24,"d":"2.16E-24"},"Potassium transporter family protein.","AT3G13510",null,325.55,-1.8711,0.17203,-10.877,1.49E-27,{"v":7.9e-26,"d":"7.90E-26"},"carboxyl-terminal peptidase, putative (DUF239).","AT2G44460","BGLU28",250.37,-5.0495,0.37267,-13.55,{"v":7.97e-42,"d":"7.97E-42"},{"v":4.08e-40,"d":"4.08E-40"},"full_name=beta glucosidase 28. beta glucosidase 28.","AT1G03610",null,455.28,1.386,0.13395,10.347,{"v":4.3e-25,"d":"4.30E-25"},2.14E-23,"plant/protein (DUF789)."]
["AT2G01580",null,180.58,-1.8811,0.18608,-10.109,{"v":5.02e-24,"d":"5.02E-24"},{"v":2.82e-22,"d":"2.82E-22"},"transmembrane protein.","AT5G20420","CHR42",152.33,-2.0181,0.19094,-10.569,{"v":4.15e-26,"d":"4.15E-26"},{"v":2.26e-24,"d":"2.26E-24"},"full_name=chromatin remodeling 42. chromatin remodeling 42.","AT5G49190","SUS2",118.48,-3.0241,0.2783,-10.866,{"v":1.67e-27,"d":"1.67E-27"},{"v":8.81e-26,"d":"8.81E-26"},"full_name=sucrose synthase 2. sucrose synthase 2. Encodes a sucrose synthase (SUS2). The activity of the enzyme could not be assayed as proved to be insoluble (PMID 17257168). However, analyses of an sus2 mutant revealed a deficiency in sucrose synthase activity 12 and 15 days after flowering. There are some reports that SUS2 transcript levels are increased in leaves specifically by O(2) deficiency whereas other reports indicate that SUS2 is expressed only in seeds. Immulocalization shows that SUS2 is present in the cytosol of developing seeds, but, it also associated with plastids, though not located within them.","AT2G16500","ADC1",217.04,-2.368,0.17488,-13.541,{"v":9.01e-42,"d":"9.01E-42"},{"v":4.6E-40,"d":"4.60E-40"},"full_name=arginine decarboxylase 1. arginine decarboxylase 1. encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Promoter region of ADC1 contains 742-bp AT-rich transposable element, called AtATE, that belongs to the MITE families of repetitive elements.","AT2G40080","ELF4",288.72,1.4993,0.14491,10.347,{"v":4.34e-25,"d":"4.34E-25"},{"v":2.16e-23,"d":"2.16E-23"},"full_name=EARLY FLOWERING 4. EARLY FLOWERING-like protein (DUF1313). Encodes a novel nuclear 111 amino-acid phytochrome-regulated component of a negative feedback loop involving the circadian clock central oscillator components CCA1 and LHY. ELF4 is necessary for light-induced expression of both CCA1 and LHY, and conversely, CCA1 and LHY act negatively on light-induced ELF4 expression. ELF4 promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. It is involved in the phyB-mediated constant red light induced seedling de-etiolation process and may function to coregulate the expression of a subset of phyB-regulated genes."]
["AT1G77380","AAP3",79.569,3.1235,0.30941,10.095,{"v":5.8e-24,"d":"5.80E-24"},{"v":3.25e-22,"d":"3.25E-22"},"full_name=amino acid permease 3. amino acid permease 3. Amino acid permease which transports basic amino acids.","AT5G04200","MC9",774.36,1.245,0.11783,10.566,{"v":4.29e-26,"d":"4.29E-26"},2.33E-24,"full_name=metacaspase 9. metacaspase 9. Encodes a putative metacaspase. Arabidopsis contains three type I MCP genes (MCP1a-c) and six type II MCP genes (MCP2a%E2%80%93f): AtMCP1a/At5g64240, AtMCP1b/At1g02170, AtMCP1c/At4g25110, AtMCP2a/At1g79310, AtMCP2b/At1g79330, AtMCP2c/At1g79320, AtMCP2d/At1g79340, AtMCP2e/At1g16420, AtMCP2f/At5g04200.","AT2G33590","CRL1",5722.7,1.181,0.10869,10.865,{"v":1.68e-27,"d":"1.68E-27"},{"v":8.86e-26,"d":"8.86E-26"},"full_name=CCR(Cinnamoyl coA:NADP oxidoreductase)-like 1. NAD(P)-binding Rossmann-fold superfamily protein. Encodes a protein with homology to members of the dihydroflavonol-4-reductase (DFR) superfamily. The expression pattern of AtCRL1 indicates that CRL1 has a role in embryogenesis and seed germination. AtCRL1 is induced by ABA, drought and heat, and is highly expressed in seeds.","AT1G22410",null,429.08,-2.2609,0.16702,-13.537,{"v":9.5e-42,"d":"9.50E-42"},{"v":4.83e-40,"d":"4.83E-40"},"Class-II DAHP synthetase family protein.","AT5G25460","DGR2",192.8,2.0945,0.20256,10.34,{"v":4.64e-25,"d":"4.64E-25"},{"v":2.3e-23,"d":"2.30E-23"},"full_name=DUF642 L-GalL responsive gene 2. transmembrane protein, putative (Protein of unknown function, DUF642)."]
["AT2G44500",null,95.666,-2.7986,0.27827,-10.057,{"v":8.54e-24,"d":"8.54E-24"},4.77E-22,"O-fucosyltransferase family protein.","AT1G51400",null,73.778,-3.5961,0.34042,-10.564,{"v":4.38e-26,"d":"4.38E-26"},{"v":2.37e-24,"d":"2.37E-24"},"Photosystem II 5 kD protein.","AT1G03990",null,1449.4,1.4828,0.13661,10.854,{"v":1.91e-27,"d":"1.91E-27"},{"v":1E-25,"d":"1.00E-25"},"Long-chain fatty alcohol dehydrogenase family protein.","AT1G04220","KCS2",122.16,-5.4806,0.4052,-13.526,{"v":1.1E-41,"d":"1.10E-41"},{"v":5.58e-40,"d":"5.58E-40"},"full_name=3-ketoacyl-CoA synthase 2. 3-ketoacyl-CoA synthase 2. Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT5G18470",null,224.79,-1.9245,0.18614,-10.339,{"v":4.69e-25,"d":"4.69E-25"},{"v":2.32e-23,"d":"2.32E-23"},"Curculin-like (mannose-binding) lectin family protein."]
["AT2G37660",null,221.41,-1.7044,0.16975,-10.041,1.01E-23,{"v":5.6e-22,"d":"5.60E-22"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT5G01820","SR1",892.97,1.0919,0.10351,10.549,{"v":5.16e-26,"d":"5.16E-26"},{"v":2.78e-24,"d":"2.78E-24"},"full_name=serine/threonine protein kinase 1. serine/threonine protein kinase 1. Encodes a CBL-interacting serine/threonine protein kinase.","AT5G64260","EXL2",3505.1,1.1475,0.10581,10.845,{"v":2.1e-27,"d":"2.10E-27"},{"v":1.1e-25,"d":"1.10E-25"},"full_name=EXORDIUM like 2. EXORDIUM like 2.","AT3G13460","ECT2",3284.8,1.0112,0.074768,13.525,1.12E-41,{"v":5.64e-40,"d":"5.64E-40"},"full_name=evolutionarily conserved C-terminal region 2. evolutionarily conserved C-terminal region 2. Physically interacts with CIPK1.","AT1G21000","PLATZ1",7272.5,0.65846,0.063691,10.338,{"v":4.72e-25,"d":"4.72E-25"},{"v":2.33e-23,"d":"2.33E-23"},"PLATZ transcription factor family protein."]
["AT5G63030","GRXC1",1339.3,1.0817,0.10783,10.031,1.11E-23,{"v":6.16e-22,"d":"6.16E-22"},"full_name=glutaredoxin C1. Thioredoxin superfamily protein.","AT5G14780","FDH",1640.9,1.1817,0.11208,10.543,{"v":5.48e-26,"d":"5.48E-26"},{"v":2.95e-24,"d":"2.95E-24"},"full_name=formate dehydrogenase. formate dehydrogenase. Encodes a NAD-dependent formate dehydrogenase.","AT1G07280",null,166.89,-2.3242,0.21436,-10.843,{"v":2.16e-27,"d":"2.16E-27"},1.13E-25,"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT4G35150",null,129.64,-3.1579,0.23352,-13.523,{"v":1.15e-41,"d":"1.15E-41"},{"v":5.78e-40,"d":"5.78E-40"},"O-methyltransferase family protein.","AT4G01970","STS",550.59,-1.1975,0.11607,-10.317,{"v":5.92e-25,"d":"5.92E-25"},{"v":2.91e-23,"d":"2.91E-23"},"full_name=stachyose synthase. stachyose synthase. Encodes a putative stachyose synthetase or raffinose synthase."]
["AT3G01930",null,168.93,1.9893,0.19863,10.015,1.31E-23,{"v":7.24e-22,"d":"7.24E-22"},"Major facilitator superfamily protein.","AT5G46290","KASI",1601.9,-1.0594,0.10049,-10.542,{"v":5.52e-26,"d":"5.52E-26"},{"v":2.96e-24,"d":"2.96E-24"},"full_name=3-ketoacyl-acyl carrier protein synthase I. 3-ketoacyl-acyl carrier protein synthase I. Encodes beta-ketoacyl-[acyl carrier protein] synthase I (KASI). Crucial for fatty acid synthesis. Plays a role in chloroplast division and embryo development.","AT5G04010",null,233.27,1.9831,0.18309,10.832,2.44E-27,{"v":1.27e-25,"d":"1.27E-25"},"F-box family protein.","AT1G64060","RBOH F",156.68,-5.2299,0.38716,-13.508,{"v":1.4e-41,"d":"1.40E-41"},{"v":7.01e-40,"d":"7.01E-40"},"full_name=respiratory burst oxidase protein F. respiratory burst oxidase protein F. Interacts with AtrbohD gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.","AT2G03520","UPS4",5022.3,-0.73824,0.071566,-10.315,{"v":6e-25,"d":"6.00E-25"},{"v":2.94e-23,"d":"2.94E-23"},"full_name=ureide permease 4. ureide permease 4. Encodes AtUPS4, a member of the Arabidopsis ureide permease family."]
["AT4G32920",null,1582.7,1.0041,0.10032,10.009,{"v":1.39e-23,"d":"1.39E-23"},{"v":7.69e-22,"d":"7.69E-22"},"glycine-rich protein.","AT3G10450","SCPL7",570.87,1.611,0.15315,10.519,{"v":7.03e-26,"d":"7.03E-26"},{"v":3.76e-24,"d":"3.76E-24"},"full_name=serine carboxypeptidase-like 7. serine carboxypeptidase-like 7.","AT1G10760","SEX1",361.73,-1.586,0.14648,-10.827,{"v":2.56e-27,"d":"2.56E-27"},{"v":1.33e-25,"d":"1.33E-25"},"full_name=STARCH EXCESS 1. Pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein. Encodes an &#945;-glucan, water dikinase required for starch degradation. Involved in cold-induced freezing tolerance. Mutations that eliminate the GWD protein or affect the dikinase domain of the enzyme dramatically reduce both the amount of phosphate in the amylopectin and the rate of starch degradation. Mature leaves of these mutants accumulate amounts of starch up to seven times greater than those in wild-type leaves. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C6 position.","AT5G66880","SNRK2.3",339.38,1.8708,0.13871,13.487,1.87E-41,{"v":9.37e-40,"d":"9.37E-40"},"full_name=sucrose nonfermenting 1(SNF1)-related protein kinase 2.3. sucrose nonfermenting 1(SNF1)-related protein kinase 2.3. encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Enzyme involved in the ABA signaling during seed germination, dormancy and seedling growth.","AT3G09350","Fes1A",1587.3,-0.74258,0.072117,-10.297,{"v":7.28e-25,"d":"7.28E-25"},{"v":3.56e-23,"d":"3.56E-23"},"full_name=Fes1A. Fes1A. Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70. Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance. Does not have nucleotide exchange factor activity in vitro."]
["AT1G70810","CAR7",487.76,1.2916,0.12923,9.9943,{"v":1.61e-23,"d":"1.61E-23"},{"v":8.88e-22,"d":"8.88E-22"},"Calcium-dependent lipid-binding (CaLB domain) family protein.","AT5G62890",null,313.12,-1.4945,0.14218,-10.511,{"v":7.66e-26,"d":"7.66E-26"},{"v":4.08e-24,"d":"4.08E-24"},"Xanthine/uracil permease family protein.","AT5G44310",null,16377,1.5655,0.1446,10.827,2.58E-27,{"v":1.33e-25,"d":"1.33E-25"},"Late embryogenesis abundant protein (LEA) family protein.","AT5G56795","MT1B",204.16,-3.2291,0.23957,-13.479,{"v":2.09e-41,"d":"2.09E-41"},{"v":1.04e-39,"d":"1.04E-39"},"full_name=metallothionein 1B. metallothionein 1B. one of the five metallothioneins (MTs) genes identified in Arabidopsis. MTs are cysteine-rich proteins required for heavy metal tolerance. The MT1b gene, however, is indicated to be inactive.","AT2G42560","LEA25",42885,-1.1066,0.1075,-10.294,{"v":7.48e-25,"d":"7.48E-25"},3.64E-23,"late embryogenesis abundant domain-containing protein / LEA domain-containing protein."]
["AT2G01210","ZAR1",309.68,-2.2627,0.22705,-9.9655,{"v":2.16e-23,"d":"2.16E-23"},1.18E-21,"Leucine-rich repeat protein kinase family protein.","AT2G40030","NRPD1B",475.76,-1.3064,0.12432,-10.509,{"v":7.89e-26,"d":"7.89E-26"},{"v":4.19e-24,"d":"4.19E-24"},"full_name=nuclear RNA polymerase D1B. nuclear RNA polymerase D1B. Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing.","AT5G05690","CPD",129.99,-2.4582,0.22753,-10.804,{"v":3.3E-27,"d":"3.30E-27"},{"v":1.7E-25,"d":"1.70E-25"},"full_name=CONSTITUTIVE PHOTOMORPHOGENIC DWARF. Cytochrome P450 superfamily protein. Encodes a member of the CP90A family, a cytochrome P450 monooxygenase which converts 6-deoxocathasterone to 6-deoxoteasterone in the late C6 oxidation pathway and cathasterone to teasterone in the early C6 oxidation pathway of brassinolide biosynthesis. Expressed in cotyledons and leaves. Mutants display de-etiolation and derepression of light-induced genes in the dark, dwarfism, male sterility and activation of stress-regulated genes in the light. The expression of the gene using a CPD promoter:LUC fusion construct was shown to be under circadian and light control. Additionally, the circadian regulation was shown to be independent of BR levels as it remains unchanged in <i>bri1</i> mutant lines. CPD appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through a BRI1-mediated signaling pathway that affects FLC expression levels, as uncovered by double mutant analyses.","AT3G01770","BET10",1120,1.3285,0.098734,13.455,2.86E-41,1.42E-39,"full_name=bromodomain and extraterminal domain protein 10. bromodomain and extraterminal domain protein 10.","AT2G41630","TFIIB",610.75,1.0862,0.10566,10.28,{"v":8.67e-25,"d":"8.67E-25"},{"v":4.21e-23,"d":"4.21E-23"},"full_name=transcription factor IIB. transcription factor IIB. Encodes a transcription factor, TFIIB1, that plays important roles in pollen tube growth, guidance, and reception as well as endosperm development and is partially functionally different from AtTFIIB2 and AtTFIIB3/AtpBRP2."]
["AT2G40460",null,3689.5,0.80901,0.081248,9.9572,2.34E-23,{"v":1.28e-21,"d":"1.28E-21"},"Major facilitator superfamily protein.","AT5G34940","GUS3",100.13,-2.8183,0.26829,-10.504,{"v":8.24e-26,"d":"8.24E-26"},{"v":4.36e-24,"d":"4.36E-24"},"full_name=glucuronidase 3. glucuronidase 3. The protein is predicted (WoLF PSORT program) to be membrane-associated.","AT1G66430","FRK3",168.7,-2.1514,0.19955,-10.781,{"v":4.21e-27,"d":"4.21E-27"},{"v":2.16e-25,"d":"2.16E-25"},"pfkB-like carbohydrate kinase family protein.","AT5G47200","RAB1A",403.63,-1.7826,0.13255,-13.449,{"v":3.14e-41,"d":"3.14E-41"},{"v":1.56e-39,"d":"1.56E-39"},"full_name=RAB GTPase homolog 1A. RAB GTPase homolog 1A. AtRabD2b encodes a Rab GTPase, which plays important roles in pollen development, germination and tube elongation.","AT3G28153",null,110.17,-2.4597,0.23966,-10.263,1.03E-24,{"v":5e-23,"d":"5.00E-23"},"transposable_element_gene."]
["AT1G14950",null,18758,1.761,0.17696,9.9513,{"v":2.49e-23,"d":"2.49E-23"},{"v":1.36e-21,"d":"1.36E-21"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein.","AT1G56600","GolS2",93.044,2.7812,0.26543,10.478,{"v":1.09e-25,"d":"1.09E-25"},{"v":5.74e-24,"d":"5.74E-24"},"full_name=galactinol synthase 2. galactinol synthase 2. GolS2 is a galactinol synthase that catalyzes the formation of galactinol from UDP-galactose and myo-inositol. GolS2 transcript levels rise in response to methyl viologen, an oxidative damage-inducing agent. Plants over-expressing GolS2 have increased tolerance to salt, chilling, and high-light stress.","AT1G26400","ATBBE5",1212.9,1.4848,0.13779,10.776,{"v":4.47e-27,"d":"4.47E-27"},{"v":2.29e-25,"d":"2.29E-25"},"FAD-binding Berberine family protein.","AT4G38470","STY46",192.66,-2.4038,0.17885,-13.441,{"v":3.5E-41,"d":"3.50E-41"},{"v":1.73e-39,"d":"1.73E-39"},"full_name=serine/threonine/tyrosine kinase 46. ACT-like protein tyrosine kinase family protein.","AT4G10690",null,304.94,-1.3995,0.13638,-10.261,1.05E-24,5.08E-23,"transposable_element_gene."]
["AT1G72510",null,137.06,-2.218,0.22313,-9.9403,{"v":2.78e-23,"d":"2.78E-23"},1.51E-21,"DUF1677 family protein (DUF1677).","AT2G41340","RPB5D",182.25,-1.9037,0.18179,-10.472,{"v":1.17e-25,"d":"1.17E-25"},{"v":6.14e-24,"d":"6.14E-24"},"full_name=RNA polymerase II fifth largest subunit, D. RNA polymerase II fifth largest subunit, D. NRPE5-like protein of unknown function; homologous to budding yeast RPB5","AT1G31070","GlcNAc1pUT1",85.747,-3.2188,0.29898,-10.766,{"v":4.99e-27,"d":"4.99E-27"},{"v":2.55e-25,"d":"2.55E-25"},"full_name=N-acetylglucosamine-1-phosphate uridylyltransferase 1. N-acetylglucosamine-1-phosphate uridylyltransferase 1. Encodes a protein that functions as an N-acetylglucosamine-1-phosphate uridylyltransferase that catalyzes the formation of UDP-N-acetylglucosamine (UDP-GlcNAc). This is an essential precursor for glycolipid and glycoprotein synthesis and is also used for regulatory protein modification in signaling pathways. The enzyme can also catalyze the reverse reaction using both UDP-GlcNAc and the less common UDP-N-acetylgalactosamine as substrates.","AT2G17710",null,227.86,-3.425,0.25492,-13.436,{"v":3.73e-41,"d":"3.73E-41"},1.84E-39,"Big1.","AT3G10350","GET3B",1851.7,-0.7808,0.076279,-10.236,1.37E-24,{"v":6.57e-23,"d":"6.57E-23"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein."]
["AT5G44720",null,2475.8,-0.93544,0.094409,-9.9083,{"v":3.83e-23,"d":"3.83E-23"},{"v":2.07e-21,"d":"2.07E-21"},"Molybdenum cofactor sulfurase family protein.","AT5G49180","PME58",73.087,-5.1224,0.48963,-10.462,1.29E-25,{"v":6.8e-24,"d":"6.80E-24"},"Plant invertase/pectin methylesterase inhibitor superfamily. Encodes a putative pectin methylesterase. The gene is preferentially expressed in floral buds.","AT5G01670",null,19657,1.1504,0.10707,10.744,{"v":6.34e-27,"d":"6.34E-27"},3.23E-25,"NAD(P)-linked oxidoreductase superfamily protein.","AT3G02310","2024-09-02",124.38,-5.0895,0.37919,-13.422,{"v":4.49e-41,"d":"4.49E-41"},{"v":2.21e-39,"d":"2.21E-39"},"full_name=SEPALLATA 2. K-box region and MADS-box transcription factor family protein. MADS-box protein, binds K domain of AG in vivo","AT3G21520","DMP1",72.762,-5.388,0.52651,-10.233,{"v":1.4e-24,"d":"1.40E-24"},{"v":6.73e-23,"d":"6.73E-23"},"full_name=DUF679 domain membrane protein 1. transmembrane protein, putative (DUF679 domain membrane protein 1). Encodes a protein is directly or indirectly involved in membrane fission during breakdown of the ER and the tonoplast during leaf senescence and in membrane fusion during vacuole biogenesis in roots."]
["AT1G76590","PLATZ2",171.53,2.263,0.22888,9.8872,{"v":4.73e-23,"d":"4.73E-23"},2.55E-21,"PLATZ transcription factor family protein.","AT1G49010","MYBS1",92.868,-2.8051,0.26829,-10.455,1.39E-25,{"v":7.25e-24,"d":"7.25E-24"},"Duplicated homeodomain-like superfamily protein.","AT1G21560",null,85.487,-3.4301,0.3195,-10.736,{"v":6.91e-27,"d":"6.91E-27"},{"v":3.51e-25,"d":"3.51E-25"},"hypothetical protein.","AT1G64795",null,1035.7,1.9593,0.14627,13.395,{"v":6.45e-41,"d":"6.45E-41"},{"v":3.16e-39,"d":"3.16E-39"},"hypothetical protein.","AT1G55850","CSLE1",1775.2,0.86029,0.084255,10.21,{"v":1.78e-24,"d":"1.78E-24"},{"v":8.51e-23,"d":"8.51E-23"},"full_name=cellulose synthase like E1. cellulose synthase like E1. encodes a protein similar to cellulose synthase"]
["AT4G01610","ATCATHB3",1345.7,1.0294,0.10416,9.8825,{"v":4.96e-23,"d":"4.96E-23"},{"v":2.66e-21,"d":"2.66E-21"},"Cysteine proteinases superfamily protein.","AT1G79690","NUDT3",9247.2,-0.97255,0.093207,-10.434,{"v":1.73e-25,"d":"1.73E-25"},{"v":9.01e-24,"d":"9.01E-24"},"full_name=nudix hydrolase homolog 3. nudix hydrolase homolog 3.","AT5G62170","TRM25",110.01,-2.8115,0.26203,-10.73,{"v":7.4e-27,"d":"7.40E-27"},3.74E-25,"full_name=TON1 Recruiting Motif 25. LOW protein: M-phase inducer phosphatase-like protein.","AT2G37360","ABCG2",140.01,-3.5901,0.26811,-13.39,{"v":6.89e-41,"d":"6.89E-41"},{"v":3.37e-39,"d":"3.37E-39"},"full_name=ATP-binding cassette G2. ABC-2 type transporter family protein. Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16).","AT5G04040","SDP1",579.98,1.1564,0.11348,10.191,{"v":2.18e-24,"d":"2.18E-24"},1.04E-22,"full_name=SUGAR-DEPENDENT1. Patatin-like phospholipase family protein. Encodes a triacylglycerol lipase that is involved in storage lipid breakdown during seed germination. The mutant plant exhibits a much slower rate of postgerminative growth than the wild type."]
["AT4G35150",null,198.7,1.9265,0.19494,9.8825,{"v":4.96e-23,"d":"4.96E-23"},{"v":2.66e-21,"d":"2.66E-21"},"O-methyltransferase family protein.","AT4G37870","PCK1",2953.4,0.93117,0.089361,10.42,{"v":2e-25,"d":"2.00E-25"},1.04E-23,"full_name=phosphoenolpyruvate carboxykinase 1. phosphoenolpyruvate carboxykinase 1. Encodes a phosphoenolpyruvate carboxykinase that localizes to the cytosol.","AT5G37670","HSP15.7",129.76,2.485,0.23198,10.712,{"v":8.92e-27,"d":"8.92E-27"},{"v":4.5e-25,"d":"4.50E-25"},"HSP20-like chaperones superfamily protein.","AT5G15740","RRT1",330.28,-2.8973,0.21669,-13.371,8.93E-41,{"v":4.36e-39,"d":"4.36E-39"},"O-fucosyltransferase family protein.","AT5G64080","XYP1",1007.3,-0.88332,0.086799,-10.177,{"v":2.52e-24,"d":"2.52E-24"},{"v":1.2E-22,"d":"1.20E-22"},"full_name=xylogen protein 1. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein."]
["AT1G06490","CalS7",144.11,-2.3096,0.23393,-9.8729,5.46E-23,{"v":2.92e-21,"d":"2.92E-21"},"full_name=callose synthase 7. glucan synthase-like 7. Encodes Callose Synthase 7 (CalS7), a phloem-specific callose synthase responsible for callose deposition in developing sieve elements during phloem formation and in mature phloem induced by wounding.","AT1G77100",null,223.11,1.7119,0.16436,10.415,2.12E-25,{"v":1.1E-23,"d":"1.10E-23"},"peroxidase superfamily protein.","AT4G05110","ENT6",290.09,-1.6487,0.15393,-10.711,{"v":9.01e-27,"d":"9.01E-27"},4.53E-25,"full_name=equilibrative nucleoside transporter 6. equilibrative nucleoside transporter 6.","AT4G11140","CRF1",142.64,3.1497,0.23564,13.367,{"v":9.47e-41,"d":"9.47E-41"},{"v":4.6e-39,"d":"4.60E-39"},"full_name=cytokinin response factor 1. cytokinin response factor 1. encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Also named as CRF1 (cytokinin response factor 1).","AT5G11100","SYTD",215.56,-1.6529,0.16264,-10.163,{"v":2.91e-24,"d":"2.91E-24"},{"v":1.38e-22,"d":"1.38E-22"},"Calcium-dependent lipid-binding (CaLB domain) family protein."]
["AT1G09750",null,115.55,-7.3713,0.74765,-9.8592,{"v":6.25e-23,"d":"6.25E-23"},3.34E-21,"Eukaryotic aspartyl protease family protein.","AT5G49820","RUS6",1097.9,-0.9719,0.093478,-10.397,{"v":2.56e-25,"d":"2.56E-25"},{"v":1.32e-23,"d":"1.32E-23"},"full_name=ROOT UV-B SENSITIVE 6. root UVB sensitive protein (Protein of unknown function, DUF647).","AT4G15210","BAM5",105.49,-2.9899,0.27921,-10.708,{"v":9.29e-27,"d":"9.29E-27"},{"v":4.66e-25,"d":"4.66E-25"},"full_name=beta-amylase 5. beta-amylase 5. cytosolic beta-amylase expressed in rosette leaves and inducible by sugar. RAM1 mutants have reduced beta amylase in leaves and stems.","AT1G48750",null,993.35,1.6415,0.12311,13.334,{"v":1.46e-40,"d":"1.46E-40"},{"v":7.08e-39,"d":"7.08E-39"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT2G19900","NADP-ME1",10707,-0.86025,0.084691,-10.158,{"v":3.07e-24,"d":"3.07E-24"},{"v":1.45e-22,"d":"1.45E-22"},"full_name=NADP-malic enzyme 1. NADP-malic enzyme 1. The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals. The enzyme is active in vitro and appears to function as a homohexamer or homooctamer. It is believed to be a cytosolic protein."]
["AT4G30270","XTH24",78.2,-3.0957,0.31429,-9.8497,{"v":6.88e-23,"d":"6.88E-23"},{"v":3.66e-21,"d":"3.66E-21"},"full_name=xyloglucan endotransglucosylase/hydrolase 24. xyloglucan endotransglucosylase/hydrolase 24. encodes a protein similar to endo xyloglucan transferase in sequence. It is also very similar to BRU1 in soybean, which is involved in brassinosteroid response.","AT3G22740","HMT3",255.68,1.7295,0.16694,10.36,{"v":3.78e-25,"d":"3.78E-25"},1.95E-23,"full_name=homocysteine S-methyltransferase 3. homocysteine S-methyltransferase 3. homocysteine S-methyltransferase (HMT3)","AT2G47780","LDAP2",134.05,2.3403,0.2187,10.701,1.01E-26,{"v":5.05e-25,"d":"5.05E-25"},"Rubber elongation factor protein (REF).","AT3G60300",null,890.11,1.3682,0.10271,13.322,{"v":1.73e-40,"d":"1.73E-40"},{"v":8.37e-39,"d":"8.37E-39"},"RWD domain-containing protein.","AT4G30210","ATR2",811.22,0.99613,0.098098,10.154,{"v":3.17e-24,"d":"3.17E-24"},1.49E-22,"full_name=P450 reductase 2. P450 reductase 2. Encodes NADPH-cytochrome P450 reductase that catalyzes the first oxidative step of the phenylpropanoid general pathway."]
["AT5G35525",null,78.676,2.757,0.27996,9.8478,{"v":7.01e-23,"d":"7.01E-23"},3.72E-21,"PLAC8 family protein.","AT3G55440","TPI",1576.6,-1.043,0.10069,-10.358,{"v":3.84e-25,"d":"3.84E-25"},{"v":1.97e-23,"d":"1.97E-23"},"full_name=triosephosphate isomerase. triosephosphate isomerase. Encodes triosephosphate isomerase.","AT5G23230","NIC2",137.73,2.239,0.2093,10.697,1.05E-26,{"v":5.22e-25,"d":"5.22E-25"},"full_name=nicotinamidase 2. nicotinamidase 2.","AT5G62100","BAG2",124.4,-5.7752,0.43354,-13.321,{"v":1.75e-40,"d":"1.75E-40"},{"v":8.43e-39,"d":"8.43E-39"},"full_name=BCL-2-associated athanogene 2. BCL-2-associated athanogene 2. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.","AT4G39130",null,462.59,-1.8269,0.17994,-10.153,{"v":3.21e-24,"d":"3.21E-24"},{"v":1.51e-22,"d":"1.51E-22"},"Dehydrin family protein."]
["AT3G25160",null,978.19,-1.2101,0.12324,-9.8194,{"v":9.29e-23,"d":"9.29E-23"},4.91E-21,"ER lumen protein retaining receptor family protein.","AT5G35790","G6PD1",127.9,-2.36,0.22802,-10.35,{"v":4.19e-25,"d":"4.19E-25"},2.15E-23,"full_name=glucose-6-phosphate dehydrogenase 1. glucose-6-phosphate dehydrogenase 1. Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root.","AT2G47130","SDR3",115.82,3.1625,0.29581,10.691,1.12E-26,{"v":5.57e-25,"d":"5.57E-25"},"full_name=short-chain dehydrogenase/reductase 2. NAD(P)-binding Rossmann-fold superfamily protein. Encodes a short-chain dehydrogenase/reductase that is not involved in ABA biosynthesis but plays an important role in plant defense response to bacteria.","AT1G15825",null,196.32,-4.4216,0.33213,-13.313,{"v":1.95e-40,"d":"1.95E-40"},{"v":9.39e-39,"d":"9.39E-39"},"hydroxyproline-rich glycoprotein family protein.","AT5G40382",null,291.94,-1.3769,0.13563,-10.152,3.25E-24,1.52E-22,"Cytochrome c oxidase subunit Vc family protein."]
["AT4G34890","XDH1",781.57,1.006,0.10248,9.8168,{"v":9.53e-23,"d":"9.53E-23"},{"v":5.03e-21,"d":"5.03E-21"},"full_name=xanthine dehydrogenase 1. xanthine dehydrogenase 1. Encodes a xanthine dehydrogenase, involved in purine catabolism. Ubiquitously expressed, but the transcript level is altered during aging, senescence, salt and cold stress, ABA treatment, and dark treatment. RNAi lines that suppress both XDH1 and XDH2 produce small plants with reduced fertility and accelerated leaf senescence. Role in drought tolerance.","AT5G62490","HVA22B",4549.8,1.2083,0.11682,10.344,{"v":4.46e-25,"d":"4.46E-25"},2.28E-23,"full_name=HVA22 homologue B. HVA22 homologue B. Part of the AtHVA22 family. Protein expression is ABA- and stress-inducible.","AT4G17790",null,436.03,-1.5247,0.14286,-10.673,{"v":1.36e-26,"d":"1.36E-26"},{"v":6.73e-25,"d":"6.73E-25"},"SNARE associated Golgi protein family.","AT1G27760","SAT32",1055.5,-1.4137,0.10632,-13.296,2.44E-40,1.17E-38,"full_name=SALT-TOLERANCE 32. interferon-related developmental regulator family protein / IFRD protein family. Encodes a protein with similarity to human interferon-related developmental regulator (IFRD)that is involved in salt tolerance. Loss of function mutations are hypersensitive to salt stress and have reduced fertility. SAT32 is found in the cytoplasm but appears to translocate to the nucleus when plants are subject to salt stress.","AT1G15230",null,1261.8,-0.80064,0.07892,-10.145,3.49E-24,1.63E-22,"hypothetical protein."]
["AT3G26330","CYP71B37",1006.7,1.1065,0.11282,9.8079,1.04E-22,5.48E-21,"full_name=cytochrome P450, family 71, subfamily B, polypeptide 37. cytochrome P450, family 71, subfamily B, polypeptide 37. putative cytochrome P450","AT4G25980",null,895.95,-1.0608,0.10257,-10.342,4.55E-25,{"v":2.32e-23,"d":"2.32E-23"},"peroxidase superfamily protein.","AT1G73190","TIP3;1",41383,0.84692,0.079473,10.657,1.62E-26,{"v":8.02e-25,"d":"8.02E-25"},"Aquaporin-like superfamily protein. Moves to the Protein Storage Vacuole in a Golgi independent manner","AT3G50740","UGT72E1",706.6,1.4081,0.10609,13.273,{"v":3.32e-40,"d":"3.32E-40"},1.58E-38,"full_name=UDP-glucosyl transferase 72E1. UDP-glucosyl transferase 72E1. UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.","AT1G75960",null,66.058,4.1547,0.41038,10.124,{"v":4.32e-24,"d":"4.32E-24"},2.01E-22,"AMP-dependent synthetase and ligase family protein."]
["AT5G63560","FACT",105.55,7.3743,0.75238,9.8013,1.11E-22,{"v":5.83e-21,"d":"5.83E-21"},"full_name=FATTY ALCOHOL:CAFFEOYL-CoA CAFFEOYL TRANSFERASE. HXXXD-type acyl-transferase family protein.","AT4G11320","CP2",1656.5,-1.0498,0.10153,-10.34,{"v":4.66e-25,"d":"4.66E-25"},{"v":2.37e-23,"d":"2.37E-23"},"Papain family cysteine protease.","AT2G47160","BOR1",133.15,-2.404,0.22588,-10.643,{"v":1.88e-26,"d":"1.88E-26"},{"v":9.28e-25,"d":"9.28E-25"},"full_name=REQUIRES HIGH BORON 1. HCO3- transporter family. Boron transporter. Protein accumulates in shoots and roots under conditions of boron deficiency and is degraded within several hours of restoring boron supply. Localized to the plasma membrane under B limitation, and to the cytoplasm after B application before degradation. Protein is transferred via the endosomes to the vacuole for degradation. Localized to the inner plasma membrane domain in the columella, lateral root cap, epidermis, and endodermis in the root tip region, and in the epidermis and endodermis in the elongation zone. Under high-boron is transported to the vacuole for degradation.","AT4G16490",null,372.21,-1.6299,0.12283,-13.269,{"v":3.5e-40,"d":"3.50E-40"},{"v":1.66e-38,"d":"1.66E-38"},"ARM repeat superfamily protein.","AT5G02240",null,1650.3,-0.99831,0.098654,-10.119,{"v":4.54e-24,"d":"4.54E-24"},2.11E-22,"NAD(P)-binding Rossmann-fold superfamily protein. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds."]
["AT4G19720",null,76.705,-3.4426,0.3513,-9.7995,1.13E-22,{"v":5.91e-21,"d":"5.91E-21"},"Glycosyl hydrolase family protein with chitinase insertion domain-containing protein.","AT3G11620",null,382.59,-1.355,0.13108,-10.338,{"v":4.77e-25,"d":"4.77E-25"},{"v":2.42e-23,"d":"2.42E-23"},"alpha/beta-Hydrolases superfamily protein.","AT5G51760","AHG1",1963,1.4421,0.13551,10.642,{"v":1.9e-26,"d":"1.90E-26"},{"v":9.32e-25,"d":"9.32E-25"},"full_name=ABA-hypersensitive germination 1. Protein phosphatase 2C family protein. Encodes AHG1 (ABA-hypersensitive germination 1), a putative protein phosphatase 2C (PP2C). Expressed in seeds. AHG1 functions in seed development and germination.","AT3G15353","MT3",106.66,-4.6816,0.35282,-13.269,{"v":3.5e-40,"d":"3.50E-40"},{"v":1.66e-38,"d":"1.66E-38"},"full_name=metallothionein 3. metallothionein 3. metallothionein, binds to and detoxifies excess copper and other metals, limiting oxidative damage","AT5G28640","AN3",645.26,1.145,0.11327,10.109,5.05E-24,2.34E-22,"full_name=ANGUSTIFOLIA 3. SSXT family protein. Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors."]
["AT4G21020",null,8273.5,1.0061,0.10294,9.7742,{"v":1.45e-22,"d":"1.45E-22"},{"v":7.57e-21,"d":"7.57E-21"},"Late embryogenesis abundant protein (LEA) family protein.","AT4G17190","FPS2",75.141,-3.5562,0.3444,-10.326,{"v":5.38e-25,"d":"5.38E-25"},{"v":2.72e-23,"d":"2.72E-23"},"full_name=farnesyl diphosphate synthase 2. farnesyl diphosphate synthase 2. Encodes a protein with farnesyl diphosphate synthase activity, which catalyzes the rate limiting step in isoprenoid biosynthesis. Its mRNA is most abundantly expressed in flowers.","AT5G53260",null,89.584,3.1187,0.29317,10.638,{"v":1.98e-26,"d":"1.98E-26"},{"v":9.71e-25,"d":"9.71E-25"},"Seed maturation protein.","AT5G38195",null,152.03,-6.1687,0.46497,-13.267,{"v":3.6e-40,"d":"3.60E-40"},1.71E-38,"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT1G68240",null,649.95,1.2394,0.12271,10.1,{"v":5.55e-24,"d":"5.55E-24"},{"v":2.56e-22,"d":"2.56E-22"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein."]
["AT4G23800","3xHMG-box2",59.777,-5.0685,0.51861,-9.7732,{"v":1.47e-22,"d":"1.47E-22"},{"v":7.63e-21,"d":"7.63E-21"},"full_name=3xHigh Mobility Group-box2. HMG (high mobility group) box protein. Encodes a protein containing three copies of the HMG (high mobility group)-box domain. The two Arabidopsis 3xHMG-box proteins are: AT4G11080 (3xHMG-box1) and AT4G23800 (3xHMG-box2). Interacts with mitotic and meiotic chromosomes.","AT4G13840","CER26",1261.2,-1.3034,0.1263,-10.32,{"v":5.7e-25,"d":"5.70E-25"},2.87E-23,"HXXXD-type acyl-transferase family protein.","AT5G02580",null,383.94,1.6067,0.15106,10.636,2.03E-26,{"v":9.9e-25,"d":"9.90E-25"},"argininosuccinate lyase.","AT4G32920",null,1236.5,-1.1555,0.087133,-13.261,{"v":3.91e-40,"d":"3.91E-40"},{"v":1.84e-38,"d":"1.84E-38"},"glycine-rich protein.","AT2G43160",null,855.46,0.9119,0.090292,10.099,{"v":5.56e-24,"d":"5.56E-24"},{"v":2.56e-22,"d":"2.56E-22"},"ENTH/VHS family protein."]
["AT1G27921",null,200.36,1.9638,0.201,9.7704,{"v":1.51e-22,"d":"1.51E-22"},{"v":7.82e-21,"d":"7.82E-21"},"Natural antisense transcript overlaps with AT1G27920. Potential natural antisense gene, locus overlaps with AT1G27920 Natural antisense transcript overlaps with AT1G27920","AT2G34250",null,4464.9,-0.78002,0.076019,-10.261,{"v":1.06e-24,"d":"1.06E-24"},{"v":5.31e-23,"d":"5.31E-23"},"SecY protein transport family protein.","AT5G18470",null,100.35,3.0918,0.29091,10.628,{"v":2.2e-26,"d":"2.20E-26"},{"v":1.07e-24,"d":"1.07E-24"},"Curculin-like (mannose-binding) lectin family protein.","AT5G42050","NRP",1249.1,-1.3182,0.09954,-13.243,{"v":4.94e-40,"d":"4.94E-40"},{"v":2.33e-38,"d":"2.33E-38"},"DCD (Development and Cell Death) domain protein.","AT1G30860",null,2793.7,0.62794,0.062237,10.09,{"v":6.14e-24,"d":"6.14E-24"},{"v":2.82e-22,"d":"2.82E-22"},"RING/U-box superfamily protein."]
["AT3G53230","AtCDC48B",619.33,1.1927,0.12208,9.7696,1.52E-22,{"v":7.86e-21,"d":"7.86E-21"},"full_name=cell division cycle 48B. ATPase, AAA-type, CDC48 protein.","AT4G20430",null,100.05,-2.614,0.25483,-10.258,1.09E-24,{"v":5.47e-23,"d":"5.47E-23"},"Subtilase family protein.","AT3G46970","PHS2",257.89,-2.1396,0.20167,-10.609,{"v":2.69e-26,"d":"2.69E-26"},1.31E-24,"full_name=alpha-glucan phosphorylase 2. alpha-glucan phosphorylase 2. Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen.","AT2G23790",null,754.64,-2.6844,0.20287,-13.232,{"v":5.73e-40,"d":"5.73E-40"},{"v":2.69e-38,"d":"2.69E-38"},"calcium uniporter (DUF607).","AT5G35320",null,882.49,-0.84967,0.084237,-10.087,{"v":6.32e-24,"d":"6.32E-24"},2.89E-22,"DBH-like monooxygenase."]
["AT4G33010","GLDP1",561.08,-1.5388,0.15784,-9.7495,1.85E-22,{"v":9.55e-21,"d":"9.55E-21"},"full_name=glycine decarboxylase P-protein 1. glycine decarboxylase P-protein 1.","AT5G08460",null,273.02,-1.5736,0.15346,-10.254,{"v":1.14e-24,"d":"1.14E-24"},{"v":5.68e-23,"d":"5.68E-23"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT4G04870","CLS",1059,1.4073,0.13275,10.601,{"v":2.94e-26,"d":"2.94E-26"},1.42E-24,"full_name=cardiolipin synthase. cardiolipin synthase. Encodes a protein with cardiolipin synthase activity that is localized to the mitochondiria.","AT4G22990","PHT5;3",770.36,1.2631,0.095786,13.187,1.05E-39,{"v":4.91e-38,"d":"4.91E-38"},"Major Facilitator Superfamily with SPX (SYG1/Pho81/XPR1) domain-containing protein.","AT5G44120","CRA1",347140,-1.1616,0.11529,-10.076,{"v":7.08e-24,"d":"7.08E-24"},{"v":3.23e-22,"d":"3.23E-22"},"full_name=CRUCIFERINA. RmlC-like cupins superfamily protein. Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds."]
["AT1G10960","FD1",204.61,-2.0376,0.20971,-9.7164,2.57E-22,1.32E-20,"full_name=ferredoxin 1. ferredoxin 1.","AT5G16390","CAC1",239.77,-1.8343,0.17904,-10.245,1.24E-24,{"v":6.18e-23,"d":"6.18E-23"},"full_name=chloroplastic acetylcoenzyme A carboxylase 1. chloroplastic acetylcoenzyme A carboxylase 1. Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex.","AT5G40610","GPDHp",393.43,-2.3102,0.21808,-10.593,{"v":3.2e-26,"d":"3.20E-26"},1.55E-24,"full_name=Glycerol-3-phosphate dehydrogenase plastidic. NAD-dependent glycerol-3-phosphate dehydrogenase family protein.","AT4G25970","PSD3",427.33,1.541,0.11686,13.186,1.06E-39,{"v":4.94e-38,"d":"4.94E-38"},"full_name=phosphatidylserine decarboxylase 3. phosphatidylserine decarboxylase 3. Encodes the major form of the two non-mitochondrail phosphatidylserine decarboxylase. Located at the ER.","AT3G08030","ATHA2-1",417.18,1.8792,0.18655,10.074,{"v":7.23e-24,"d":"7.23E-24"},{"v":3.29e-22,"d":"3.29E-22"},"DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642). The mRNA of this gene is expressed in viable seeds. Its detection in a dry seed lot has potential for use as a molecular marker for germination performance as absence of expression correlates with decreased germination."]
["AT1G12420","ACR8",145.98,-2.0162,0.20753,-9.7152,{"v":2.6E-22,"d":"2.60E-22"},{"v":1.33e-20,"d":"1.33E-20"},"full_name=ACT domain repeat 8. ACT domain repeat 8.","AT5G26850",null,78.732,-3.1117,0.30393,-10.238,{"v":1.34e-24,"d":"1.34E-24"},6.63E-23,"Uncharacterized protein.","AT1G52690","LEA7",9874.5,1.2609,0.11952,10.55,{"v":5.1e-26,"d":"5.10E-26"},2.46E-24,"full_name=LATE EMBRYOGENESIS ABUNDANT 7. Late embryogenesis abundant protein (LEA) family protein.","AT2G37040","PAL1",123.99,-5.4177,0.41104,-13.18,1.14E-39,{"v":5.3e-38,"d":"5.30E-38"},"full_name=PHE ammonia lyase 1. PHE ammonia lyase 1. Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).","AT5G44190","GLK2",201.12,1.7016,0.16919,10.057,{"v":8.55e-24,"d":"8.55E-24"},{"v":3.88e-22,"d":"3.88E-22"},"full_name=GOLDEN2-like 2. GOLDEN2-like 2. Encodes GLK2, Golden2-like 2, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK1, Golden2-like 1, is encoded by At2g20570. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus."]
["AT1G02500","SAM1",2606,-0.91567,0.094267,-9.7136,{"v":2.64e-22,"d":"2.64E-22"},1.35E-20,"full_name=S-adenosylmethionine synthetase 1. S-adenosylmethionine synthetase 1. encodes a S-adenosylmethionine synthetase. SAM1 is regulated by protein S-nitrosylation. The covalent binding of nitric oxide (NO) to the Cys114 residue inhibits the enzyme activity.","AT5G13330","Rap2.6L",251,1.5189,0.14837,10.237,1.35E-24,{"v":6.69e-23,"d":"6.69E-23"},"full_name=related to AP2 6l. related to AP2 6l. encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.","AT4G18030",null,326.02,-1.5247,0.14464,-10.542,{"v":5.55e-26,"d":"5.55E-26"},{"v":2.67e-24,"d":"2.67E-24"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT3G02890","AIPP2",655.08,-1.6415,0.12466,-13.168,1.34E-39,{"v":6.24e-38,"d":"6.24E-38"},"RING/FYVE/PHD zinc finger superfamily protein.","AT5G54640","RAT5",1146.8,-0.86105,0.08562,-10.057,{"v":8.59e-24,"d":"8.59E-24"},{"v":3.88e-22,"d":"3.88E-22"},"full_name=RESISTANT TO AGROBACTERIUM TRANSFORMATION 5. Histone superfamily protein. Isolated from T-DNA insertion line, the rat5 mutant is deficient in T-DNA integration. Encodes histone2A protein."]
["AT2G38380",null,2838.7,-0.98744,0.10178,-9.702,{"v":2.96e-22,"d":"2.96E-22"},{"v":1.51e-20,"d":"1.51E-20"},"Peroxidase superfamily protein.","AT5G12950",null,314.42,-1.5171,0.14844,-10.22,1.62E-24,{"v":7.98e-23,"d":"7.98E-23"},"proline-tRNA ligase (DUF1680).","AT1G54957",null,114.16,2.7926,0.26494,10.541,{"v":5.6e-26,"d":"5.60E-26"},{"v":2.68e-24,"d":"2.68E-24"},"transmembrane protein.","AT3G56870",null,98.89,-4.8742,0.37046,-13.157,{"v":1.55e-39,"d":"1.55E-39"},{"v":7.16e-38,"d":"7.16E-38"},"hypothetical protein.","AT2G24940","MAPR2",1198.6,-0.77257,0.076848,-10.053,{"v":8.89e-24,"d":"8.89E-24"},{"v":4.01e-22,"d":"4.01E-22"},"full_name=membrane-associated progesterone binding protein 2. membrane-associated progesterone binding protein 2."]
["AT1G27461","DRG",3788.1,1.0229,0.1057,9.6774,{"v":3.76e-22,"d":"3.76E-22"},{"v":1.91e-20,"d":"1.91E-20"},"hypothetical protein.","AT3G22960","PKP-ALPHA",3163.8,-0.85382,0.083556,-10.219,{"v":1.64e-24,"d":"1.64E-24"},{"v":8.07e-23,"d":"8.07E-23"},"Pyruvate kinase family protein. encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.","AT1G69540","AGL94",77.53,4.283,0.40635,10.54,{"v":5.64e-26,"d":"5.64E-26"},{"v":2.69e-24,"d":"2.69E-24"},"full_name=AGAMOUS-like 94. AGAMOUS-like 94. Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators.","AT4G22670","HIP1",886.9,1.351,0.10278,13.145,{"v":1.83e-39,"d":"1.83E-39"},{"v":8.44e-38,"d":"8.44E-38"},"full_name=HSP70-interacting protein 1. HSP70-interacting protein 1. Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","AT4G27970","SLAH2",85.93,3.5319,0.35237,10.023,{"v":1.2E-23,"d":"1.20E-23"},{"v":5.41e-22,"d":"5.41E-22"},"full_name=SLAC1 homologue 2. SLAC1 homologue 2. Encodes a protein with ten predicted transmembrane helices. The SLAH2 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. But, it is not expressed in guard cells and cannot complement a slac1-2 mutant suggesting that it performs a different function. SLAH2:GFP localizes to the plasma membrane."]
["AT5G18840",null,682.46,-1.3157,0.13617,-9.6617,{"v":4.39e-22,"d":"4.39E-22"},2.22E-20,"Major facilitator superfamily protein.","AT3G09820","ADK1",661.2,-1.3498,0.1321,-10.218,{"v":1.66e-24,"d":"1.66E-24"},{"v":8.13e-23,"d":"8.13E-23"},null,"AT1G60940","SNRK2.10",718.44,1.3004,0.12347,10.532,{"v":6.16e-26,"d":"6.16E-26"},{"v":2.93e-24,"d":"2.93E-24"},"full_name=SNF1-related protein kinase 2.10. SNF1-related protein kinase 2.10. encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.","AT1G75170",null,159.79,-2.7137,0.20658,-13.136,{"v":2.05e-39,"d":"2.05E-39"},{"v":9.44e-38,"d":"9.44E-38"},"Sec14p-like phosphatidylinositol transfer family protein.","AT4G24150","GRF8",1408.8,0.9558,0.095404,10.018,1.26E-23,{"v":5.67e-22,"d":"5.67E-22"},"full_name=growth-regulating factor 8. growth-regulating factor 8. Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower."]
["AT5G17310","UGP2",3171.4,0.92333,0.095713,9.6469,{"v":5.07e-22,"d":"5.07E-22"},{"v":2.56e-20,"d":"2.56E-20"},"full_name=UDP-glucose pyrophosphorylase 2. UDP-glucose pyrophosphorylase 2.","AT1G32710",null,302.16,2.0139,0.19714,10.216,1.69E-24,{"v":8.27e-23,"d":"8.27E-23"},"Cytochrome c oxidase, subunit Vib family protein.","AT5G13690","CYL1",279.66,-1.717,0.16309,-10.528,{"v":6.41e-26,"d":"6.41E-26"},{"v":3.04e-24,"d":"3.04E-24"},"full_name=CYCLOPS 1. alpha-N-acetylglucosaminidase family / NAGLU family. Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.","AT4G27160","SESA3",411080,-2.3557,0.17942,-13.129,{"v":2.23e-39,"d":"2.23E-39"},{"v":1.02e-37,"d":"1.02E-37"},"full_name=seed storage albumin 3. seed storage albumin 3.","AT3G48990","AAE3",12314,0.78303,0.078185,10.015,1.31E-23,{"v":5.85e-22,"d":"5.85E-22"},"full_name=ACYL-ACTIVATING ENZYME 3. AMP-dependent synthetase and ligase family protein. Encodes an oxalyl-CoA synthetase and is required for oxalate degradation, for normal seed development, and for defense against an oxalate-producing fungal pathogen."]
["AT3G18890","Tic62",53.531,-4.2036,0.43754,-9.6074,{"v":7.44e-22,"d":"7.44E-22"},{"v":3.75e-20,"d":"3.75E-20"},"full_name=translocon at the inner envelope membrane of chloroplasts 62. NAD(P)-binding Rossmann-fold superfamily protein.","AT5G65700","BAM1",283.18,-1.5862,0.15538,-10.209,1.81E-24,{"v":8.84e-23,"d":"8.84E-23"},"full_name=BARELY ANY MERISTEM 1. Leucine-rich receptor-like protein kinase family protein. Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.","AT1G27730","STZ",1198.7,1.6433,0.15609,10.528,{"v":6.42e-26,"d":"6.42E-26"},{"v":3.04e-24,"d":"3.04E-24"},"full_name=salt tolerance zinc finger. salt tolerance zinc finger. Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.","AT5G04885","BGLC3",1326.2,-1.5427,0.11775,-13.102,{"v":3.2e-39,"d":"3.20E-39"},1.46E-37,"Glycosyl hydrolase family protein.","AT5G63320","NPX1",1006.8,0.95103,0.095377,9.9712,{"v":2.04e-23,"d":"2.04E-23"},{"v":9.08e-22,"d":"9.08E-22"},"full_name=nuclear protein X1. nuclear protein X1. Encodes NPX1 (Nuclear Protein X1), a nuclear factor regulating abscisic acid responses."]
["AT1G06520","GPAT1",135.12,2.0048,0.20886,9.599,{"v":8.08e-22,"d":"8.08E-22"},4.06E-20,"full_name=GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 1. glycerol-3-phosphate acyltransferase 1. sn-glycerol-3-phosphate 2-O-acyltransferase. Expressed in flower buds and siliques. Homozygous mutant plants are male sterile.","AT2G34430","LHB1B1",61.537,-4.2454,0.41604,-10.204,{"v":1.9e-24,"d":"1.90E-24"},9.25E-23,null,"AT3G50230",null,80.869,-3.6415,0.34608,-10.522,{"v":6.84e-26,"d":"6.84E-26"},3.23E-24,"Leucine-rich repeat protein kinase family protein.","AT2G28000","CPN60A",972.97,1.3186,0.10075,13.087,{"v":3.89e-39,"d":"3.89E-39"},1.78E-37,"full_name=chaperonin-60alpha. chaperonin-60alpha. Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development.","AT4G32285","CAP1",848.68,0.8694,0.087242,9.9654,{"v":2.16e-23,"d":"2.16E-23"},{"v":9.61e-22,"d":"9.61E-22"},"ENTH/ANTH/VHS superfamily protein."]
["AT4G23890","NdhS",162.83,-1.7855,0.18612,-9.593,{"v":8.55e-22,"d":"8.55E-22"},{"v":4.29e-20,"d":"4.29E-20"},"full_name=NADH dehydrogenase-like complex S. NAD(P)H-quinone oxidoreductase subunit S.","AT4G20170","GALS3",332.72,1.3484,0.13219,10.201,{"v":1.97e-24,"d":"1.97E-24"},{"v":9.52e-23,"d":"9.52E-23"},"full_name=galactan synthase 3. glycosyltransferase family protein (DUF23).","AT5G45630",null,139.29,2.4167,0.22971,10.521,{"v":6.95e-26,"d":"6.95E-26"},{"v":3.27e-24,"d":"3.27E-24"},"senescence regulator (Protein of unknown function, DUF584).","AT4G26940",null,346.59,-1.6986,0.12986,-13.081,{"v":4.24e-39,"d":"4.24E-39"},1.93E-37,"Galactosyltransferase family protein.","AT3G13960","GRF5",184.99,1.8424,0.18488,9.965,{"v":2.17e-23,"d":"2.17E-23"},{"v":9.62e-22,"d":"9.62E-22"},"full_name=growth-regulating factor 5. growth-regulating factor 5. Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower."]
["AT5G23940","PEL3",1164.8,-1.775,0.18521,-9.5838,{"v":9.35e-22,"d":"9.35E-22"},{"v":4.67e-20,"d":"4.67E-20"},"full_name=PERMEABLE LEAVES3. HXXXD-type acyl-transferase family protein. Encodes PERMEABLE LEAVES3 (PEL3), a putative acyl-transferase. Mutation in this locus results in altered trichome phenotype (trcichomes become tangled during leaf expansion). Additional phenotype includes altered cuticle layer.","AT1G04990",null,490.5,-1.4911,0.14617,-10.201,{"v":1.97e-24,"d":"1.97E-24"},{"v":9.52e-23,"d":"9.52E-23"},"Zinc finger C-x8-C-x5-C-x3-H type family protein.","AT1G43670","FBP",174.77,1.9753,0.18781,10.518,{"v":7.17e-26,"d":"7.17E-26"},3.36E-24,"full_name=fructose-1,6-bisphosphatase. Inositol monophosphatase family protein. Encodes a fructose-1,6-bisphosphatase. This enzyme, in addition to catalyzing the formation of fructose-6-phosphate for sucrose biosynthesis, appears to play a role in fructose-mediated signaling that is independent of its enzymatic activity. atcfbp-1/fins1 mutants have reduced photosynthetic rates, elevated levels of starch and reduced levels of sucrose during the day. Although the protein is expected to be cytosolic, a GFP-tagged version localizes to the cytoplasm and the nucleus.","AT4G24040","TRE1",233.5,-2.4829,0.18984,-13.079,{"v":4.36e-39,"d":"4.36E-39"},{"v":1.98e-37,"d":"1.98E-37"},"full_name=trehalase 1. trehalase 1. Encodes a trehalase, member of Glycoside Hydrolase Family 37.","AT3G21650",null,264.01,1.5101,0.15161,9.9601,2.28E-23,1.01E-21,"Protein phosphatase 2A regulatory B subunit family protein. Encodes protein phosphatase 2A (PP2A) B'zeta subunit. Targeted to mitochondria."]
["AT5G55620",null,3057.1,1.2401,0.12959,9.5694,{"v":1.08e-21,"d":"1.08E-21"},{"v":5.36e-20,"d":"5.36E-20"},"hypothetical protein.","AT2G45340",null,65.729,-3.7188,0.36481,-10.194,{"v":2.11e-24,"d":"2.11E-24"},1.02E-22,"Leucine-rich repeat protein kinase family protein.","AT5G51810","GA20OX2",101.4,-3.0244,0.28756,-10.517,{"v":7.18e-26,"d":"7.18E-26"},3.36E-24,"full_name=gibberellin 20 oxidase 2. gibberellin 20 oxidase 2. Encodes gibberellin 20-oxidase. Involved in gibberellin biosynthesis. Up-regulated by far red light in elongating petioles. Not regulated by a circadian clock.","AT2G07050","CAS1",278.02,-1.9938,0.15245,-13.078,{"v":4.38e-39,"d":"4.38E-39"},{"v":1.98e-37,"d":"1.98E-37"},"full_name=cycloartenol synthase 1. cycloartenol synthase 1. Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.","AT1G66410","CAM4",2423.1,-0.81282,0.081632,-9.9572,2.35E-23,{"v":1.03e-21,"d":"1.03E-21"},"full_name=calmodulin 4. calmodulin 4. encodes a calmodulin"]
["AT1G12230","GSM2-LIKE",1832.2,-1.0133,0.1059,-9.5687,{"v":1.08e-21,"d":"1.08E-21"},{"v":5.38e-20,"d":"5.38E-20"},"Aldolase superfamily protein.","AT3G05910","ATPAE12",687.19,-1.159,0.11385,-10.18,{"v":2.44e-24,"d":"2.44E-24"},{"v":1.18e-22,"d":"1.18E-22"},"Pectinacetylesterase family protein.","AT1G24360","KR",353.1,-1.8438,0.17548,-10.507,{"v":7.99e-26,"d":"7.99E-26"},{"v":3.73e-24,"d":"3.73E-24"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT3G29360","UGD2",278.96,-2.1637,0.16545,-13.078,{"v":4.4E-39,"d":"4.40E-39"},{"v":1.99e-37,"d":"1.99E-37"},"full_name=UDP-glucose dehydrogenase 2. UDP-glucose 6-dehydrogenase family protein. Encodes one of four UDP-glucose dehydrogenase UGD) genes. Mutation of this gene in combination with UGD3 leads to swollen plant cell walls and severe developmental defects associated with changes in pectic polysaccharides.","AT4G11570","ATPYRP2",1767.9,0.75316,0.075712,9.9477,{"v":2.58e-23,"d":"2.58E-23"},{"v":1.14e-21,"d":"1.14E-21"},"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein."]
["AT1G01720","ATAF1",1119.7,0.95145,0.099609,9.5518,{"v":1.27e-21,"d":"1.27E-21"},{"v":6.32e-20,"d":"6.32E-20"},"NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA.","AT2G17230","EXL5",717.42,1.1301,0.11109,10.172,{"v":2.64e-24,"d":"2.64E-24"},1.27E-22,"full_name=EXORDIUM like 5. EXORDIUM like 5.","AT5G52882",null,987.31,-1.422,0.13534,-10.507,{"v":8e-26,"d":"8.00E-26"},{"v":3.73e-24,"d":"3.73E-24"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT1G44800","SIAR1",170.53,-6.9831,0.5345,-13.065,{"v":5.24e-39,"d":"5.24E-39"},{"v":2.36e-37,"d":"2.36E-37"},"full_name=Siliques Are Red 1. nodulin MtN21 /EamA-like transporter family protein. Encodes Siliques Are Red 1 (SIAR1). Functions as a bidirectional amino acid transporter that is crucial for the amino acid homeostasis of siliques. Member of nodulin MtN21-like transporter family.","AT3G19930","STP4",346.4,1.4778,0.14881,9.9307,{"v":3.06e-23,"d":"3.06E-23"},1.34E-21,"full_name=sugar transporter 4. sugar transporter 4. Encodes a sucrose hydrogen symporter that is induced by wounding."]
["AT3G23050","IAA7",82.137,2.5579,0.26793,9.5467,1.34E-21,{"v":6.62e-20,"d":"6.62E-20"},"full_name=indole-3-acetic acid 7. indole-3-acetic acid 7. Transcription regulator acting as repressor of auxin-inducible gene expression. Plays role in the control of gravitropic growth and development in light-grown seedlings. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components. Pseudomonas syringae type III effector AvrRpt2 stimulates AXR2 protein turnover.","AT3G48670","IDN2",986.31,-1.1568,0.11387,-10.159,{"v":3.02e-24,"d":"3.02E-24"},{"v":1.45e-22,"d":"1.45E-22"},"full_name=INVOLVED IN DE NOVO 2. XH/XS domain-containing protein. Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.","AT5G42250",null,59.775,4.8176,0.45857,10.506,{"v":8.13e-26,"d":"8.13E-26"},{"v":3.78e-24,"d":"3.78E-24"},"Zinc-binding alcohol dehydrogenase family protein.","AT4G31550","WRKY11",160.53,-3.0753,0.23555,-13.056,{"v":5.88e-39,"d":"5.88E-39"},{"v":2.64e-37,"d":"2.64E-37"},"full_name=WRKY DNA-binding protein 11. WRKY DNA-binding protein 11. member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae.","AT3G49570","LSU3",113.85,-2.5819,0.26024,-9.9215,{"v":3.36e-23,"d":"3.36E-23"},{"v":1.47e-21,"d":"1.47E-21"},"full_name=RESPONSE TO LOW SULFUR 3. response to low sulfur 3."]
["AT5G12950",null,923.09,-1.4034,0.14737,-9.5235,1.67E-21,{"v":8.25e-20,"d":"8.25E-20"},"proline-tRNA ligase (DUF1680).","AT1G50430","DWF5",501.95,-1.199,0.11833,-10.133,{"v":3.93e-24,"d":"3.93E-24"},1.88E-22,"full_name=DWARF 5. Ergosterol biosynthesis ERG4/ERG24 family. Mutants are defective in Brassinosteroid biosynthesis (delta7-sterol-C7 reduction step) and have a dwarf phenotype.","AT3G12960","SMP1",1720.5,2.1444,0.2044,10.491,{"v":9.5e-26,"d":"9.50E-26"},{"v":4.4E-24,"d":"4.40E-24"},"full_name=seed maturation protein 1. seed maturation protein.","AT2G47750","GH3.9",216.63,-7.9267,0.60804,-13.036,{"v":7.6e-39,"d":"7.60E-39"},{"v":3.4e-37,"d":"3.40E-37"},"full_name=putative indole-3-acetic acid-amido synthetase GH3.9. putative indole-3-acetic acid-amido synthetase GH3.9. Encodes GH3.9, a member of the GH3 family auxin-responsive genes. gh3.9-1 mutants had greater primary root length, increased sensitivity to indole-3-acetic acid (IAA)-mediated root growth inhibition, but no obvious effects on apical dominance or leaf morphology.","AT5G61790","CNX1",313.95,-1.3721,0.1383,-9.9212,{"v":3.37e-23,"d":"3.37E-23"},{"v":1.47e-21,"d":"1.47E-21"},"full_name=calnexin 1. calnexin 1."]
["AT2G43820","UGT74F2",555.35,-1.1555,0.12144,-9.5147,{"v":1.82e-21,"d":"1.82E-21"},{"v":8.96e-20,"d":"8.96E-20"},"full_name=UDP-glucosyltransferase 74F2. UDP-glucosyltransferase 74F2. Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.","AT2G16365","PCH1",221.21,-1.6121,0.15939,-10.114,{"v":4.78e-24,"d":"4.78E-24"},2.28E-22,"F-box family protein.","AT3G11420",null,276.81,1.689,0.16106,10.487,{"v":9.95e-26,"d":"9.95E-26"},{"v":4.6e-24,"d":"4.60E-24"},"beta-1,3-N-acetylglucosaminyltransferase lunatic protein, putative (DUF604).","AT4G34620","SSR16",907,1.3185,0.10132,13.013,1.03E-38,{"v":4.59e-37,"d":"4.59E-37"},"full_name=small subunit ribosomal protein 16. small subunit ribosomal protein 16. Encodes ribosomal protein S16, has embryo-defective lethal mutant phenotype","AT1G67340",null,442.59,1.1695,0.11845,9.873,{"v":5.45e-23,"d":"5.45E-23"},{"v":2.37e-21,"d":"2.37E-21"},"HCP-like superfamily protein with MYND-type zinc finger."]
["AT5G66610","DAR7",228.61,1.7584,0.18486,9.512,{"v":1.87e-21,"d":"1.87E-21"},{"v":9.17e-20,"d":"9.17E-20"},"full_name=DA1-related protein 7. DA1-related protein 7.","AT5G20280","SPS1F",1526.7,0.97937,0.096973,10.099,{"v":5.56e-24,"d":"5.56E-24"},{"v":2.64e-22,"d":"2.64E-22"},"full_name=sucrose phosphate synthase 1F. sucrose phosphate synthase 1F. Encodes a protein with putative sucrose-phosphate synthase activity. When the gene was expressed in transgenic tobacco plants, a clear trend for increased SPS activity was noted.","AT2G21720",null,3507.8,1.1211,0.10697,10.481,1.06E-25,{"v":4.88e-24,"d":"4.88E-24"},"ArgH (DUF639).","AT1G52880","NAM",143.61,-6.7317,0.51795,-12.997,1.27E-38,5.67E-37,"full_name=NO APICAL MERISTEM. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Transcription factor with a NAC domain. Homologous to the petunia gene NAM which is required for the development of the shoot. Expressed in the embryo.","AT1G69870","NRT1.7",1444.9,0.77546,0.078662,9.8581,{"v":6.32e-23,"d":"6.32E-23"},2.74E-21,"full_name=nitrate transporter 1.7. nitrate transporter 1.7. Encodes a low affinity nitrate transporter NRT1.7. Expressed in phloem. Responsible for source-to-sink remobilization of nitrate."]
["AT5G67480","BT4",937.66,1.3044,0.1373,9.5001,{"v":2.1e-21,"d":"2.10E-21"},1.03E-19,"full_name=BTB and TAZ domain protein 4. BTB and TAZ domain protein 4. BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.","AT5G38530","TSBtype2",629.58,1.2917,0.12804,10.088,6.24E-24,2.95E-22,"full_name=tryptophan synthase beta type 2. tryptophan synthase beta type 2. TSBtype2 encodes a type 2 tryptophan synthase beta subunit that catalyzes a condensation reaction between serine and indole to generate tryptophan.It appears to form a homodimer. Its biological role has not yet been determined, but it has a very high affinity for indole which may be involved in allowing TSBtype2 to carefully limit free indole build-up. But, to date no overall change in plant morphology or seedling root growth have been observed in tsbtype2 mutants, indicating that this gene is not essential under optimum conditions. n most organs, TSBtype2 is transcripts are expressed at a lower level than TSB1 but in dry seeds they are expressed at comparable levels.","AT3G52930","FBA8",481.48,-1.823,0.17396,-10.48,1.07E-25,4.92E-24,"full_name=fructose-bisphosphate aldolase 8. Aldolase superfamily protein.","AT2G16660",null,178.17,-3.2731,0.25189,-12.994,{"v":1.32e-38,"d":"1.32E-38"},{"v":5.86e-37,"d":"5.86E-37"},"Major facilitator superfamily protein.","AT3G44290","NAC060",941.1,0.82581,0.083779,9.857,{"v":6.39e-23,"d":"6.39E-23"},{"v":2.76e-21,"d":"2.76E-21"},"full_name=NAC domain containing protein 60. NAC domain containing protein 60."]
["AT3G10570","CYP77A6",128.67,2.4357,0.25649,9.4963,2.17E-21,1.06E-19,"full_name=cytochrome P450, family 77, subfamily A, polypeptide 6. cytochrome P450, family 77, subfamily A, polypeptide 6. member of CYP77A","AT4G28100",null,135.92,-2.4219,0.2404,-10.075,7.15E-24,3.38E-22,"transmembrane protein.","AT4G02690","LFG3",1179.2,1.6693,0.1594,10.473,1.15E-25,{"v":5.28e-24,"d":"5.28E-24"},"Bax inhibitor-1 family protein.","AT1G21770",null,298.29,2.4591,0.18934,12.988,{"v":1.43e-38,"d":"1.43E-38"},6.33E-37,"Acyl-CoA N-acyltransferases (NAT) superfamily protein.","AT1G64270",null,112.76,-2.1837,0.22256,-9.812,{"v":1E-22,"d":"1.00E-22"},{"v":4.31e-21,"d":"4.31E-21"},"transposable_element_gene."]
["AT1G53000","CKS",521.42,1.2382,0.13045,9.4923,{"v":2.26e-21,"d":"2.26E-21"},{"v":1.1e-19,"d":"1.10E-19"},"full_name=CMP-KDO synthetase. Nucleotide-diphospho-sugar transferases superfamily protein. Encodes a mitochondrial-localized CMP-KDO (3-deoxy-D-manno-octulosonate) synthetase. This is the enzyme activating KDO as a nucleotide sugar prior to its incorporation into rhamnogalacturonan-II. Heterozygous mutants are defective in pollen development and in pollen tube elongation.","AT5G19220","APL1",359.06,-1.355,0.13469,-10.06,{"v":8.29e-24,"d":"8.29E-24"},{"v":3.91e-22,"d":"3.91E-22"},"full_name=ADP glucose pyrophosphorylase large subunit 1. ADP glucose pyrophosphorylase large subunit 1. Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL1 is the major large subunit isoform present in leaves. Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions.","AT1G15960","NRAMP6",2235.1,1.299,0.12413,10.465,{"v":1.25e-25,"d":"1.25E-25"},5.72E-24,"full_name=NRAMP metal ion transporter 6. NRAMP metal ion transporter 6. member of Nramp2 family","AT3G60130","BGLU16",102.1,-4.4485,0.34277,-12.978,1.62E-38,{"v":7.17e-37,"d":"7.17E-37"},"full_name=beta glucosidase 16. beta glucosidase 16.","AT4G27160","SESA3",103740,-2.1202,0.21636,-9.7994,1.13E-22,{"v":4.87e-21,"d":"4.87E-21"},"full_name=seed storage albumin 3. seed storage albumin 3."]
["AT4G13840","CER26",2969.9,-1.0356,0.10987,-9.4257,{"v":4.27e-21,"d":"4.27E-21"},{"v":2.07e-19,"d":"2.07E-19"},"HXXXD-type acyl-transferase family protein.","AT5G63140","PAP29",81.337,-2.8633,0.28485,-10.052,{"v":9.03e-24,"d":"9.03E-24"},{"v":4.24e-22,"d":"4.24E-22"},"full_name=purple acid phosphatase 29. purple acid phosphatase 29.","AT5G50770","HSD6",818.99,-1.5477,0.1479,-10.464,{"v":1.26e-25,"d":"1.26E-25"},{"v":5.74e-24,"d":"5.74E-24"},"full_name=hydroxysteroid dehydrogenase 6. hydroxysteroid dehydrogenase 6. Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.","AT5G66610","DAR7",101.02,-4.0498,0.31222,-12.971,{"v":1.79e-38,"d":"1.79E-38"},{"v":7.89e-37,"d":"7.89E-37"},"full_name=DA1-related protein 7. DA1-related protein 7.","AT3G12920","BRG3",954.86,-0.98773,0.10087,-9.7926,{"v":1.21e-22,"d":"1.21E-22"},{"v":5.2e-21,"d":"5.20E-21"},"full_name=BOI-related gene 3. SBP (S-ribonuclease binding protein) family protein. Encodes one of the BRGs (BOI-related gene) involved in resistance to Botrytis cinerea."]
["AT5G64570","XYL4",86.17,-3.0703,0.32576,-9.4251,{"v":4.3e-21,"d":"4.30E-21"},2.08E-19,"full_name=beta-D-xylosidase 4. beta-D-xylosidase 4. Encodes a beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.","AT5G44720",null,1147.1,-1.1093,0.11048,-10.04,1.01E-23,{"v":4.75e-22,"d":"4.75E-22"},"Molybdenum cofactor sulfurase family protein.","AT1G70800","EHB1",329.44,1.4759,0.14118,10.454,{"v":1.41e-25,"d":"1.41E-25"},{"v":6.39e-24,"d":"6.39E-24"},"full_name=ENHANCED BENDING 1. Calcium-dependent lipid-binding (CaLB domain) family protein. Encodes a novel NPH3/phototropin binding factor with a calcium binding domain that negatively affects hypocotyl bending under blue light conditions in Arabidopsis thaliana and may regulate phototropism.","AT2G14095",null,141.85,-3.7241,0.28748,-12.954,2.22E-38,{"v":9.75e-37,"d":"9.75E-37"},"hypothetical protein.","AT2G41070","EEL",1375.1,-0.7278,0.074408,-9.7813,1.36E-22,{"v":5.8E-21,"d":"5.80E-21"},"full_name=ENHANCED EM LEVEL. Basic-leucine zipper (bZIP) transcription factor family protein. Transcription factor homologous to ABI5. Regulates AtEm1 expression by binding directly at the AtEm1 promoter. Located in the nucleus and expressed during seed maturation in the cotyledons and later in the whole embryo."]
["AT4G01410",null,705.34,1.045,0.11088,9.4242,{"v":4.33e-21,"d":"4.33E-21"},2.09E-19,"Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family.","AT2G43360","BIO2",285.22,-1.576,0.15702,-10.037,1.05E-23,{"v":4.89e-22,"d":"4.89E-22"},"full_name=BIOTIN AUXOTROPH 2. Radical SAM superfamily protein. Catalyzes the conversion of dethiobiotin to biotin.","AT1G62510",null,150.28,3.2283,0.30947,10.432,1.77E-25,{"v":8.02e-24,"d":"8.02E-24"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT1G14580","BLJ",334.63,-2.158,0.16667,-12.947,{"v":2.43e-38,"d":"2.43E-38"},1.06E-36,"C2H2-like zinc finger protein.","AT1G77100",null,128.1,-2.3472,0.24005,-9.7778,{"v":1.4E-22,"d":"1.40E-22"},{"v":5.99e-21,"d":"5.99E-21"},"peroxidase superfamily protein."]
["AT1G71890","SUC5",64.866,-3.1441,0.33364,-9.4235,{"v":4.36e-21,"d":"4.36E-21"},{"v":2.1e-19,"d":"2.10E-19"},"Major facilitator superfamily protein. Encodes a sucrose transporter that is expressed in the endosperm. Mutants have delayed accumulation of fatty acids and embryo maturation.","AT1G73190","TIP3;1",27741,0.74045,0.073777,10.036,{"v":1.06e-23,"d":"1.06E-23"},{"v":4.92e-22,"d":"4.92E-22"},"Aquaporin-like superfamily protein. Moves to the Protein Storage Vacuole in a Golgi independent manner","AT5G65470",null,1120.2,1.449,0.1389,10.432,1.78E-25,{"v":8.02e-24,"d":"8.02E-24"},"O-fucosyltransferase family protein.","AT3G07255",null,215.71,2.497,0.19311,12.931,3.03E-38,{"v":1.32e-36,"d":"1.32E-36"},"nuclear transport factor 2/RNA recognition motif protein.","AT2G34750",null,964.72,0.84899,0.086932,9.7662,{"v":1.57e-22,"d":"1.57E-22"},{"v":6.69e-21,"d":"6.69E-21"},"RNA polymerase I specific transcription initiation factor RRN3 protein."]
["AT5G43300","GDPD3",153.01,2.0256,0.21513,9.4154,{"v":4.71e-21,"d":"4.71E-21"},{"v":2.26e-19,"d":"2.26E-19"},"full_name=glycerophosphodiester phosphodiesterase 3. PLC-like phosphodiesterases superfamily protein. Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family.","AT3G43270",null,246.74,-1.6663,0.16609,-10.032,{"v":1.1E-23,"d":"1.10E-23"},{"v":5.1e-22,"d":"5.10E-22"},"Plant invertase/pectin methylesterase inhibitor superfamily.","AT1G22370","UGT85A5",75.909,3.6701,0.35205,10.425,{"v":1.91e-25,"d":"1.91E-25"},{"v":8.6e-24,"d":"8.60E-24"},"full_name=UDP-glucosyl transferase 85A5. UDP-glucosyl transferase 85A5.","AT1G78380","GSTU19",2534.1,1.0189,0.078959,12.904,{"v":4.25e-38,"d":"4.25E-38"},1.85E-36,"full_name=glutathione S-transferase TAU 19. glutathione S-transferase TAU 19. Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.","AT2G18050","HIS1-3",1073.6,-0.90018,0.092397,-9.7426,1.98E-22,{"v":8.43e-21,"d":"8.43E-21"},"full_name=histone H1-3. histone H1-3. encodes a structurally divergent linker histone whose gene expression is induced by dehydration and ABA."]
["AT3G54500","LNK2",662.2,1.0976,0.11673,9.4032,5.29E-21,{"v":2.53e-19,"d":"2.53E-19"},"agglutinin-like protein.","AT3G12960","SMP1",502.96,1.517,0.15153,10.011,1.36E-23,{"v":6.32e-22,"d":"6.32E-22"},"full_name=seed maturation protein 1. seed maturation protein.","AT5G10030","TGA4",74.266,3.0392,0.29155,10.424,{"v":1.92e-25,"d":"1.92E-25"},{"v":8.64e-24,"d":"8.64E-24"},"full_name=TGACG motif-binding factor 4. TGACG motif-binding factor 4. Encodes a member of basic leucine zipper transcription gene family. Nomenclature according to Xiang, et al. (1997).","AT1G01250",null,210.31,-2.3121,0.17941,-12.887,{"v":5.34e-38,"d":"5.34E-38"},2.32E-36,"Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.","AT1G67580","CDKG2",863.92,0.84202,0.086552,9.7284,2.28E-22,{"v":9.66e-21,"d":"9.66E-21"},"Protein kinase superfamily protein."]
["AT5G44410","ATBBE27",215.11,1.7789,0.18919,9.4027,{"v":5.32e-21,"d":"5.32E-21"},{"v":2.54e-19,"d":"2.54E-19"},"FAD-binding Berberine family protein.","AT5G01520","AIRP2",652.63,1.6448,0.16468,9.988,{"v":1.72e-23,"d":"1.72E-23"},7.95E-22,"full_name=ABA Insensitive RING Protein 2. RING/U-box superfamily protein.","AT3G62700","ABCC14",1989.2,1.225,0.11765,10.413,{"v":2.17e-25,"d":"2.17E-25"},{"v":9.73e-24,"d":"9.73E-24"},"full_name=ATP-binding cassette C14. multidrug resistance-associated protein 10. member of MRP subfamily","AT3G15500","NAC3",452.61,-2.7476,0.21331,-12.881,{"v":5.76e-38,"d":"5.76E-38"},{"v":2.5E-36,"d":"2.50E-36"},"full_name=NAC domain containing protein 3. NAC domain containing protein 3. Encodes an ATAF-like NAC-domain transcription factor that doesn't contain C-terminal sequences shared by CUC1, CUC2 and NAM. Note: this protein (AtNAC3) is not to be confused with the protein encoded by locus AT3G29035, which, on occasion, has also been referred to as AtNAC3.","AT3G18780","ACT2",239.82,1.5291,0.15725,9.7237,{"v":2.39e-22,"d":"2.39E-22"},1.01E-20,"full_name=actin 2. actin 2. Encodes an actin that is constitutively expressed in vegetative structures but not pollen. ACT2 is involved in tip growth of root hairs."]
["AT3G17860","JAZ3",379.41,1.9376,0.20612,9.4004,{"v":5.43e-21,"d":"5.43E-21"},{"v":2.59e-19,"d":"2.59E-19"},"full_name=jasmonate-zim-domain protein 3. jasmonate-zim-domain protein 3. JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine.","AT4G01130",null,61.029,-4.2263,0.42319,-9.9867,{"v":1.74e-23,"d":"1.74E-23"},{"v":8.03e-22,"d":"8.03E-22"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT2G01490","PAHX",389.52,1.5593,0.14984,10.407,{"v":2.31e-25,"d":"2.31E-25"},{"v":1.03e-23,"d":"1.03E-23"},"full_name=phytanoyl-CoA 2-hydroxylase. phytanoyl-CoA dioxygenase (PhyH) family protein. Encodes a phytanoyl-CoA 2-hydroxylase (PAHX).","AT2G19310","HSP18.5",1065.5,1.9882,0.15445,12.873,{"v":6.43e-38,"d":"6.43E-38"},2.78E-36,"HSP20-like chaperones superfamily protein.","AT2G22680","WAVH1",71.406,3.989,0.41048,9.7179,{"v":2.53e-22,"d":"2.53E-22"},1.06E-20,"full_name=WAV3 homolog 1. Zinc finger (C3HC4-type RING finger) family protein."]
["AT5G66580",null,259.4,1.6605,0.17673,9.3955,{"v":5.7e-21,"d":"5.70E-21"},{"v":2.7e-19,"d":"2.70E-19"},"hypothetical protein.","AT5G60210","RIP5",301.53,-1.4492,0.14546,-9.9633,2.21E-23,1.01E-21,"full_name=ROP interactive partner 5. ROP interactive partner 5. Encodes RIP5 (ROP interactive partner 5), a putative Rho protein effector, interacting specifically with the active form of ROPs (Rho proteins of plants).","AT5G44670","GALS2",378.45,1.7052,0.16387,10.405,{"v":2.35e-25,"d":"2.35E-25"},1.05E-23,"full_name=galactan synthase 2. glycosyltransferase family protein (DUF23).","AT2G16280","KCS9",485,-2.27,0.17662,-12.853,{"v":8.31e-38,"d":"8.31E-38"},{"v":3.58e-36,"d":"3.58E-36"},"full_name=3-ketoacyl-CoA synthase 9. 3-ketoacyl-CoA synthase 9. Encodes KCS9, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT2G28120","OTU",349.09,1.4444,0.14872,9.7123,{"v":2.67e-22,"d":"2.67E-22"},1.12E-20,"Major facilitator superfamily protein."]
["AT2G46820","PSI-P",357.56,-1.267,0.13499,-9.3859,6.24E-21,{"v":2.95e-19,"d":"2.95E-19"},"full_name=photosystem I P subunit. photosystem I P subunit. Encodes the P subunit of Photosystem I. About 25% of the TMP14 pool appeared to be phosphorylated, and this ratio is not affected by light. Contains seven phosphorylation sites on threonine residue and chloroplast targeting signal. Located in the proximity of PSI-L, -H and -O subunits.","AT3G12120","FAD2",10952,-0.80768,0.081207,-9.946,{"v":2.63e-23,"d":"2.63E-23"},{"v":1.2E-21,"d":"1.20E-21"},"full_name=fatty acid desaturase 2. fatty acid desaturase 2. Major enzyme responsible for the synthesis of 18:2 fatty acids in the endoplasmic reticulum. Contains His-rich motifs, which contribute to the interaction with the electron donor cytochrome b5. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.","AT3G06420","ATG8H",744.99,1.1686,0.11234,10.403,{"v":2.41e-25,"d":"2.41E-25"},1.07E-23,"full_name=autophagy 8h. Ubiquitin-like superfamily protein.","AT3G23175",null,506.86,-1.5415,0.12033,-12.811,1.42E-37,{"v":6.09e-36,"d":"6.09E-36"},"HR-like lesion-inducing protein-like protein.","AT1G22190","RAP2.4",751.15,1.0443,0.10754,9.7106,{"v":2.72e-22,"d":"2.72E-22"},{"v":1.14e-20,"d":"1.14E-20"},"Integrase-type DNA-binding superfamily protein. The gene encodes a putative transcription factor belongings to the abiotic stress-associated DREB A-6 clade."]
["AT2G22080",null,574.16,1.137,0.12124,9.3778,6.74E-21,{"v":3.18e-19,"d":"3.18E-19"},"transmembrane protein.","AT3G23760",null,74.069,-3.3563,0.33787,-9.9337,{"v":2.97e-23,"d":"2.97E-23"},{"v":1.36e-21,"d":"1.36E-21"},"transferring glycosyl group transferase.","AT3G19000",null,279.01,-2.0869,0.20078,-10.394,{"v":2.64e-25,"d":"2.64E-25"},1.17E-23,"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT3G17170","RFC3",148.52,3.697,0.28881,12.801,{"v":1.62e-37,"d":"1.62E-37"},{"v":6.96e-36,"d":"6.96E-36"},"full_name=REGULATOR OF FATTY-ACID COMPOSITION 3. Translation elongation factor EF1B/ribosomal protein S6 family protein.","AT2G24240",null,115.18,2.5611,0.26422,9.693,{"v":3.23e-22,"d":"3.23E-22"},1.35E-20,"BTB/POZ domain with WD40/YVTN repeat-like protein."]
["AT3G19820","DWF1",2413.1,-0.9167,0.097812,-9.372,{"v":7.11e-21,"d":"7.11E-21"},3.35E-19,"full_name=DWARF 1. cell elongation protein / DWARF1 / DIMINUTO (DIM). Involved in the conversion of the early brassinosteroid precursor 24-methylenecholesterol to campesterol. Brassinosteroids affect cellular elongation. Mutants have dwarf phenotype. DWF1 is a Ca2+-dependent calmodulin-binding protein.","AT5G44550","CASPL1B1",99.566,-2.6291,0.26483,-9.9275,{"v":3.16e-23,"d":"3.16E-23"},{"v":1.44e-21,"d":"1.44E-21"},"Uncharacterized protein family (UPF0497).","AT3G12580","HSP70",12801,1.684,0.16227,10.378,{"v":3.12e-25,"d":"3.12E-25"},{"v":1.38e-23,"d":"1.38E-23"},"full_name=heat shock protein 70. heat shock protein 70.","AT1G07420","SMO2-1",674.94,-1.2748,0.099715,-12.784,{"v":2.01e-37,"d":"2.01E-37"},{"v":8.6e-36,"d":"8.60E-36"},"full_name=sterol 4-alpha-methyl-oxidase 2-1. sterol 4-alpha-methyl-oxidase 2-1. Arabidopsis thaliana sterol 4-alpha-methyl-oxidase mRNA","AT5G53480","KPNB1",706.9,0.92038,0.095067,9.6814,{"v":3.62e-22,"d":"3.62E-22"},{"v":1.51e-20,"d":"1.51E-20"},"ARM repeat superfamily protein."]
["AT3G21230","4CL5",354.6,-1.3781,0.14709,-9.369,{"v":7.32e-21,"d":"7.32E-21"},{"v":3.44e-19,"d":"3.44E-19"},"full_name=4-coumarate:CoA ligase 5. 4-coumarate:CoA ligase 5. The gene encodes a 4-coumarate coenzyme A ligase being able to use sinapate as substrate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, 5-OH-ferulic acid, ferulic acid and sinapic acid. At4CL5 was unable to use cinnamic acid as substrate. Knockout of At4CL5 (4cl5) revealed no effect on syringyl lignin content indicating that the activity observed does probably not occur in vivo.","AT1G76590","PLATZ2",443,1.252,0.12624,9.9175,{"v":3.5e-23,"d":"3.50E-23"},1.59E-21,"PLATZ transcription factor family protein.","AT5G45310",null,1045.6,1.447,0.13949,10.374,3.26E-25,1.44E-23,"coiled-coil protein.","AT2G41710",null,773.33,1.4006,0.10965,12.773,{"v":2.33e-37,"d":"2.33E-37"},{"v":9.94e-36,"d":"9.94E-36"},"Integrase-type DNA-binding superfamily protein.","AT1G69540","AGL94",411.32,-1.3048,0.13481,-9.6789,{"v":3.71e-22,"d":"3.71E-22"},1.54E-20,"full_name=AGAMOUS-like 94. AGAMOUS-like 94. Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators."]
["AT3G25855","ATHMP28",58.087,-3.5104,0.37476,-9.3673,{"v":7.44e-21,"d":"7.44E-21"},{"v":3.49e-19,"d":"3.49E-19"},"Copper transport protein family.","AT1G26820","RNS3",463.72,1.3305,0.13417,9.9164,{"v":3.53e-23,"d":"3.53E-23"},{"v":1.6e-21,"d":"1.60E-21"},"full_name=ribonuclease 3. ribonuclease 3. Encodes ribonuclease RNS3.","AT5G13170","SAG29",2029,-1.3244,0.12771,-10.37,{"v":3.4E-25,"d":"3.40E-25"},{"v":1.5E-23,"d":"1.50E-23"},"full_name=senescence-associated gene 29. senescence-associated gene 29. Encodes a member of the SWEET sucrose efflux transporter family proteins.","AT4G34020","DJ1C",189.96,2.2829,0.17909,12.747,{"v":3.23e-37,"d":"3.23E-37"},{"v":1.37e-35,"d":"1.37E-35"},"full_name=DJ-1 homolog C. Class I glutamine amidotransferase-like superfamily protein. Encodes a homolog of animal DJ-1 superfamily protein. In the A. thaliana genome, three genes encoding close homologs of human DJ-1 were identified AT3G14990 (DJ1A), AT1G53280 (DJ1B) and AT4G34020 (DJ1C). Among the three homologs, DJ1C is essential for chloroplast development and viability.","AT2G07698",null,174.67,2.442,0.25237,9.6761,{"v":3.81e-22,"d":"3.81E-22"},{"v":1.58e-20,"d":"1.58E-20"},"ATPase, F1 complex, alpha subunit protein."]
["AT4G38950",null,113.18,-2.5133,0.2686,-9.357,{"v":8.2e-21,"d":"8.20E-21"},3.83E-19,"ATP binding microtubule motor family protein.","AT1G11190","BFN1",608.39,1.2886,0.1301,9.905,{"v":3.96e-23,"d":"3.96E-23"},{"v":1.79e-21,"d":"1.79E-21"},"full_name=bifunctional nuclease i. bifunctional nuclease i. Encodes a bifunctional nuclease that acts on both RNA and DNA involved in nucleic acid degradation to facilitate nucleotide and phosphate recovery during senescence. It has mismatch-specific endonuclease activity with wide recognition of single base mismatches as well as the ability to cleave indel types of mismatches (heteroduplexes with loops).","AT5G07260",null,86.683,-3.0464,0.29391,-10.365,3.58E-25,1.57E-23,"START (StAR-related lipid-transfer) lipid-binding domain-containing protein.","AT4G21580",null,1184.6,1.1257,0.088337,12.743,3.39E-37,{"v":1.44e-35,"d":"1.44E-35"},"oxidoreductase, zinc-binding dehydrogenase family protein.","AT4G02520","GSTF2",6272.9,-0.71045,0.073604,-9.6524,{"v":4.8E-22,"d":"4.80E-22"},{"v":1.99e-20,"d":"1.99E-20"},"full_name=glutathione S-transferase PHI 2. glutathione S-transferase PHI 2. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim."]
["AT4G18425","DMP4",428.35,2.0383,0.21798,9.3509,{"v":8.69e-21,"d":"8.69E-21"},{"v":4.05e-19,"d":"4.05E-19"},"transmembrane protein, putative (DUF679).","AT5G54960","PDC2",1043,1.0051,0.10148,9.9037,{"v":4.01e-23,"d":"4.01E-23"},{"v":1.81e-21,"d":"1.81E-21"},"full_name=pyruvate decarboxylase-2. pyruvate decarboxylase-2. pyruvate decarboxylase-2","AT2G45850","AHL9",98.235,-2.9666,0.28649,-10.355,{"v":3.97e-25,"d":"3.97E-25"},{"v":1.74e-23,"d":"1.74E-23"},"AT hook motif DNA-binding family protein.","AT1G70670","CLO4",490.99,-3.6504,0.28758,-12.693,{"v":6.43e-37,"d":"6.43E-37"},{"v":2.72e-35,"d":"2.72E-35"},"full_name=caleosin 4. Caleosin-related family protein. The gene encodes a stress-responsive and OB-associated non-seed caleosin-like protein. It plays a negative regulator role in ABA signaling.","AT4G21500",null,76.938,3.2285,0.33514,9.6331,{"v":5.8e-22,"d":"5.80E-22"},{"v":2.39e-20,"d":"2.39E-20"},"transmembrane protein."]
["AT4G13210",null,120.69,-2.5389,0.27168,-9.3455,{"v":9.15e-21,"d":"9.15E-21"},4.25E-19,"Pectin lyase-like superfamily protein.","AT5G38170",null,504.32,-1.7504,0.17677,-9.902,{"v":4.08e-23,"d":"4.08E-23"},{"v":1.84e-21,"d":"1.84E-21"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT1G62220",null,311.24,-2.9503,0.28511,-10.348,{"v":4.27e-25,"d":"4.27E-25"},{"v":1.86e-23,"d":"1.86E-23"},"transmembrane protein.","AT2G43710","SSI2",998.71,-1.905,0.15029,-12.676,{"v":8.07e-37,"d":"8.07E-37"},3.41E-35,"full_name=suppressor of SA insensitive 2. Plant stearoyl-acyl-carrier-protein desaturase family protein. Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates.","AT1G78050","PGM",89.67,3.0674,0.31868,9.6251,{"v":6.26e-22,"d":"6.26E-22"},{"v":2.58e-20,"d":"2.58E-20"},"full_name=phosphoglycerate/bisphosphoglycerate mutase. phosphoglycerate/bisphosphoglycerate mutase."]
["AT1G15050","IAA34",69.743,2.9116,0.31174,9.3398,{"v":9.65e-21,"d":"9.65E-21"},{"v":4.47e-19,"d":"4.47E-19"},"full_name=indole-3-acetic acid inducible 34. indole-3-acetic acid inducible 34. Belongs to auxin inducible gene family.","AT1G65880","BZO1",1251.3,-1.7293,0.17467,-9.9003,{"v":4.15e-23,"d":"4.15E-23"},1.86E-21,"full_name=benzoyloxyglucosinolate 1. benzoyloxyglucosinolate 1. Encodes a benzoate-CoA ligase. Involved in the biosynthesis of benzoyloxyglucosinolate in Arabidopsis seeds.","AT5G15410","DND1",199.43,-1.9731,0.19101,-10.33,{"v":5.16e-25,"d":"5.16E-25"},{"v":2.25e-23,"d":"2.25E-23"},"full_name=DEFENSE NO DEATH 1. Cyclic nucleotide-regulated ion channel family protein. 'defense, no death' gene (DND1) encodes a mutated cyclic nucleotide-gated cation channel; Same as CNGC2 (article ID 229): Cyclic nucleotide gated channel, activated by cAMP, conducts K+ and other monovalent cations but excludes Na+, does not contain the GYG amino acid sequence found in other channels with this conductivity profile. Conducts Ca2+ into cells which is linked to the generation of NO and the NO signaling pathway involved in the innate immune response to pathogens.","AT4G30850","HHP2",313.01,-3.5165,0.27791,-12.654,1.07E-36,{"v":4.5e-35,"d":"4.50E-35"},"full_name=heptahelical transmembrane protein2. heptahelical transmembrane protein2. heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors","AT5G09970","CYP78A7",634.07,1.2275,0.12779,9.6053,{"v":7.59e-22,"d":"7.59E-22"},{"v":3.12e-20,"d":"3.12E-20"},"full_name=cytochrome P450, family 78, subfamily A, polypeptide 7. cytochrome P450, family 78, subfamily A, polypeptide 7. member of CYP78A"]
["AT1G14530","THH1",685.5,1.1672,0.125,9.3374,{"v":9.88e-21,"d":"9.88E-21"},{"v":4.57e-19,"d":"4.57E-19"},"full_name=TOM THREE HOMOLOG 1. tobamovirus multiplication-like protein (DUF1084).","AT1G14720","XTH28",596.77,1.1656,0.11786,9.8902,{"v":4.59e-23,"d":"4.59E-23"},{"v":2.06e-21,"d":"2.06E-21"},"full_name=xyloglucan endotransglucosylase/hydrolase 28. xyloglucan endotransglucosylase/hydrolase 28. member of Glycoside Hydrolase Family 16","AT2G30200","EMB3147",160.13,-2.5428,0.24626,-10.326,{"v":5.38e-25,"d":"5.38E-25"},2.34E-23,"full_name=EMBRYO DEFECTIVE 3147. EMBRYO DEFECTIVE 3147.","AT3G62290","ARFA1E",1322.8,1.0174,0.080478,12.642,1.24E-36,{"v":5.2e-35,"d":"5.20E-35"},"full_name=ADP-ribosylation factor A1E. ADP-ribosylation factor A1E. A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.","AT3G63170","FAP1",494.97,-1.02,0.1062,-9.6047,{"v":7.64e-22,"d":"7.64E-22"},{"v":3.13e-20,"d":"3.13E-20"},"full_name=fatty-acid-binding protein 1. Chalcone-flavanone isomerase family protein. Encodes a plastid stroma localized fatty acid binding protein involved in fatty acid metabolism."]
["AT5G50170",null,582.28,1.1374,0.12205,9.319,1.17E-20,{"v":5.42e-19,"d":"5.42E-19"},"C2 calcium/lipid-binding and GRAM domain containing protein.","AT4G22130","SRF8",403.1,-1.3481,0.13636,-9.8867,{"v":4.75e-23,"d":"4.75E-23"},{"v":2.12e-21,"d":"2.12E-21"},"full_name=STRUBBELIG-receptor family 8. STRUBBELIG-receptor family 8.","AT1G43640","TLP5",354.04,-1.8054,0.17499,-10.317,{"v":5.91e-25,"d":"5.91E-25"},{"v":2.56e-23,"d":"2.56E-23"},"full_name=tubby like protein 5. tubby like protein 5. Member of TLP family","AT2G29300",null,2359.1,1.3874,0.10986,12.628,1.48E-36,{"v":6.2e-35,"d":"6.20E-35"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT1G62420",null,1376.3,1.0054,0.10472,9.6011,{"v":7.91e-22,"d":"7.91E-22"},{"v":3.23e-20,"d":"3.23E-20"},"DUF506 family protein (DUF506)."]
["AT1G70985",null,187.03,1.9798,0.21257,9.3134,{"v":1.24e-20,"d":"1.24E-20"},{"v":5.69e-19,"d":"5.69E-19"},"hydroxyproline-rich glycoprotein family protein.","AT1G52760","LysoPL2",841.49,-1.1119,0.11253,-9.8806,{"v":5.05e-23,"d":"5.05E-23"},{"v":2.25e-21,"d":"2.25E-21"},"full_name=lysophospholipase 2. lysophospholipase 2. Encodes caffeoyl shikimate esterase and is involved in lignin biosynthesis. CSE converts caffeoyl shikimate to caffiate. Loss of function mutations have reduced lignin content and collapsed vessel elements. It is also reported to function as a lysophospholipase 2 (LysoPL2) involved in tolerance to cadmium-induced oxidative stress. Binds Acyl-CoA-binding protein 2 (ACBP2).","AT1G24490","ALB4",905.69,1.3695,0.13289,10.305,{"v":6.69e-25,"d":"6.69E-25"},{"v":2.89e-23,"d":"2.89E-23"},"full_name=ALBINA 4. OxaA/YidC-like membrane insertion protein. Homologue of the Alb3/Oxa1/YidC family. ALB4 is almost identical to the Alb3/Oxa1/YidC domain of the previously described 110 kDa inner envelope protein ARTEMIS. However, ALB4 is expressed as a separate 55 kDa protein and is located in the thylakoid membrane of chloroplasts. Analysis of a T-DNA insertion line with a reduced level of Alb4 revealed chloroplasts with an altered ultrastructure. Mutant plastids are larger, more spherical in appearance and the grana stacks within the mutant lines are less appressed than in the wild-type chloroplasts. ALB4 is required for proper chloroplast biogenesis.","AT5G38160",null,92.28,-4.0248,0.31879,-12.625,{"v":1.53e-36,"d":"1.53E-36"},{"v":6.39e-35,"d":"6.39E-35"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT2G27230","LHW",234.81,1.5652,0.1631,9.5962,{"v":8.29e-22,"d":"8.29E-22"},{"v":3.38e-20,"d":"3.38E-20"},"full_name=LONESOME HIGHWAY. transcription factor-like protein. Encodes a nuclear-localized transcriptional activator with weak sequence similarity to basic helix-loop-helix(bHLH)-domain proteins. It promotes the production of stele cells in root meristems and is required to establish and maintain the normal vascular cell number and pattern in primary and lateral roots."]
["AT5G05270","CHIL",356.31,-1.6314,0.17517,-9.3132,{"v":1.24e-20,"d":"1.24E-20"},{"v":5.69e-19,"d":"5.69E-19"},"full_name=chalcone isomerase like. Chalcone-flavanone isomerase family protein.","AT5G41600","BTI3",271.82,-1.4516,0.14732,-9.8537,{"v":6.61e-23,"d":"6.61E-23"},{"v":2.94e-21,"d":"2.94E-21"},"full_name=VIRB2-interacting protein 3. VIRB2-interacting protein 3.","AT3G56090","FER3",127.1,2.358,0.22888,10.302,{"v":6.88e-25,"d":"6.88E-25"},{"v":2.96e-23,"d":"2.96E-23"},"full_name=ferritin 3. ferritin 3. Encodes FERRITIN 3, AtFER3. Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life. Function as the main iron store in mammals. Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool.","AT2G45510","CYP704A2",3976,1.1036,0.087471,12.617,{"v":1.7e-36,"d":"1.70E-36"},{"v":7.1e-35,"d":"7.10E-35"},"full_name=cytochrome P450, family 704, subfamily A, polypeptide 2. cytochrome P450, family 704, subfamily A, polypeptide 2. member of CYP704A","AT5G42190","SKP1B",1000.5,-0.86265,0.090053,-9.5794,{"v":9.76e-22,"d":"9.76E-22"},{"v":3.96e-20,"d":"3.96E-20"},"E3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein. Similar to SKP1 in yeast and humans which are involved in mitotic cell cycle control and ubiquitin mediated proteolysis."]
["AT3G54340","AP3",712.04,-1.0876,0.11699,-9.2964,1.45E-20,{"v":6.65e-19,"d":"6.65E-19"},"full_name=APETALA 3. K-box region and MADS-box transcription factor family protein. Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies petal and stamen identities. Associates with PISTILLATA.","AT2G14890","AGP9",97.834,-2.8482,0.29031,-9.8107,1.01E-22,{"v":4.49e-21,"d":"4.49E-21"},"full_name=arabinogalactan protein 9. arabinogalactan protein 9. putative proline-rich protein (At2g14890) mRNA, complete","AT1G30700","ATBBE8",776.04,-2.1159,0.2057,-10.287,{"v":8.1E-25,"d":"8.10E-25"},{"v":3.48e-23,"d":"3.48E-23"},"FAD-binding Berberine family protein.","AT1G19600",null,196.23,2.2188,0.17591,12.614,{"v":1.78e-36,"d":"1.78E-36"},{"v":7.39e-35,"d":"7.39E-35"},"pfkB-like carbohydrate kinase family protein.","AT4G36360","BGAL3",1007.8,-1.0193,0.10662,-9.5604,{"v":1.17e-21,"d":"1.17E-21"},4.75E-20,"full_name=beta-galactosidase 3. beta-galactosidase 3. putative beta-galactosidase (BGAL3 gene)"]
["AT5G01370","ACI1",53.077,-3.9074,0.42053,-9.2916,{"v":1.52e-20,"d":"1.52E-20"},{"v":6.94e-19,"d":"6.94E-19"},"full_name=ALC-interacting protein 1. ALC-interacting protein 1. Nuclear protein with a lysine-rich domain and a C-terminal serine-rich domain. Interacts with Alcatraz (ALC). ACI1 is mainly expressed in the vascular system. Involved in cell separation during fruit dehiscence.","AT3G10340","PAL4",940.92,-0.9731,0.099344,-9.7953,{"v":1.18e-22,"d":"1.18E-22"},{"v":5.22e-21,"d":"5.22E-21"},"full_name=phenylalanine ammonia-lyase 4. phenylalanine ammonia-lyase 4. Encodes PAL4, a putative a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).","AT3G26060","PRXQ",268.98,-1.9028,0.18498,-10.287,{"v":8.1E-25,"d":"8.10E-25"},{"v":3.48e-23,"d":"3.48E-23"},"full_name=peroxiredoxin Q. Thioredoxin superfamily protein. encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus","AT4G26270","PFK3",634.31,1.8495,0.14677,12.602,{"v":2.06e-36,"d":"2.06E-36"},8.54E-35,"full_name=phosphofructokinase 3. phosphofructokinase 3.","AT1G48840",null,1258.6,0.88927,0.093131,9.5486,1.31E-21,{"v":5.31e-20,"d":"5.31E-20"},"heat-inducible transcription repressor (DUF639)."]
["AT4G38740","ROC1",5424,0.81246,0.087482,9.2872,{"v":1.58e-20,"d":"1.58E-20"},{"v":7.22e-19,"d":"7.22E-19"},"full_name=rotamase CYP 1. rotamase CYP 1. Encodes cytosolic cyclophilin ROC1.","AT2G37025","TRFL8",87.544,-2.7527,0.28135,-9.7839,{"v":1.32e-22,"d":"1.32E-22"},{"v":5.82e-21,"d":"5.82E-21"},"full_name=TRF-like 8. TRF-like 8.","AT5G08640","FLS1",92.293,-3.5201,0.3425,-10.278,{"v":8.89e-25,"d":"8.89E-25"},{"v":3.8e-23,"d":"3.80E-23"},"full_name=flavonol synthase 1. flavonol synthase 1. Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols. Co-expressed with CHI and CHS (qRT-PCR).","AT5G15960","KIN1",100.49,-5.193,0.41234,-12.594,{"v":2.28e-36,"d":"2.28E-36"},{"v":9.41e-35,"d":"9.41E-35"},"stress-responsive protein (KIN1) / stress-induced protein (KIN1). cold and ABA inducible protein kin1, possibly functions as an anti-freeze protein. Transcript level of this gene is induced by cold, ABA, dehydration and osmoticum (mannitol). However, protein activity of GUS fused to the promoter of this gene is inhibited by cold treatment, suggesting an inhibition of the protein by increased transcript level.","AT4G03390","SRF3",277.91,-1.3296,0.13937,-9.5403,1.42E-21,{"v":5.74e-20,"d":"5.74E-20"},"full_name=STRUBBELIG-receptor family 3. STRUBBELIG-receptor family 3."]
["AT2G42220",null,70.198,-2.7922,0.3008,-9.2829,1.65E-20,{"v":7.5e-19,"d":"7.50E-19"},"Rhodanese/Cell cycle control phosphatase superfamily protein.","AT3G01420","DOX1",1403.3,1.432,0.1464,9.7814,{"v":1.35e-22,"d":"1.35E-22"},{"v":5.95e-21,"d":"5.95E-21"},"Peroxidase superfamily protein. Encodes an alpha-dioxygenase involved in protection against oxidative stress and cell death. Induced in response to Salicylic acid and oxidative stress. Independent of NPR1 in induction by salicylic acid.","AT1G72680","CAD1",933.1,1.3992,0.1363,10.266,{"v":1.01e-24,"d":"1.01E-24"},{"v":4.3E-23,"d":"4.30E-23"},"full_name=cinnamyl-alcohol dehydrogenase. cinnamyl-alcohol dehydrogenase.","AT3G03650","EDA5",97.956,-5.0748,0.40304,-12.591,{"v":2.36e-36,"d":"2.36E-36"},{"v":9.74e-35,"d":"9.74E-35"},"full_name=embryo sac development arrest 5. Exostosin family protein.","AT5G14570","NRT2.7",1866.8,0.67464,0.070812,9.5272,1.62E-21,{"v":6.5e-20,"d":"6.50E-20"},"full_name=high affinity nitrate transporter 2.7. high affinity nitrate transporter 2.7. Encodes ATNRT2.7, a nitrate transporter that controls nitrate content in seeds. Expression is detected in reproductive organs and peaks in seeds. Localized to the vacuolar membrane."]
["AT3G24180",null,1070.3,1.037,0.11172,9.2821,1.66E-20,{"v":7.53e-19,"d":"7.53E-19"},"Beta-glucosidase, GBA2 type family protein.","AT5G13710","SMT1",243.47,-1.546,0.15814,-9.7765,{"v":1.42e-22,"d":"1.42E-22"},6.24E-21,"full_name=sterol methyltransferase 1. sterol methyltransferase 1. SMT1 controls the level of cholesterol in plants","AT5G61490",null,235.73,2.2446,0.21867,10.265,{"v":1.02e-24,"d":"1.02E-24"},{"v":4.33e-23,"d":"4.33E-23"},"transmembrane protein.","AT5G45830","DOG1",2327.1,-2.3838,0.18933,-12.591,{"v":2.37e-36,"d":"2.37E-36"},{"v":9.74e-35,"d":"9.74E-35"},"full_name=DELAY OF GERMINATION 1. delay of germination 1. Encodes DOG1 (DELAY OF GERMINATION 1). A quantitative trait locus involved in the control of seed dormancy. Belongs to a novel plant-specific gene family whose members include: DOG1-like 1-4 (DOGL1-4, At4g18660, At4g18680, At4g18690, At4g18650 respectively) and DOG1. DOG1 expression is seed-specific.","AT3G25840","PRP4KA",923.39,-0.87994,0.092463,-9.5167,{"v":1.79e-21,"d":"1.79E-21"},{"v":7.17e-20,"d":"7.17E-20"},"Protein kinase superfamily protein."]
["AT1G76550",null,924.06,-1.0737,0.11573,-9.2774,1.74E-20,{"v":7.85e-19,"d":"7.85E-19"},"Phosphofructokinase family protein.","AT2G29380","HAI3",67.461,3.1822,0.32573,9.7697,1.52E-22,{"v":6.65e-21,"d":"6.65E-21"},"full_name=highly ABA-induced PP2C gene 3. highly ABA-induced PP2C protein 3.","AT1G67730","KCR1",771.07,-1.3693,0.13352,-10.255,1.12E-24,{"v":4.76e-23,"d":"4.76E-23"},"full_name=beta-ketoacyl reductase 1. beta-ketoacyl reductase 1. Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.","AT1G70840","MLP31",8335.1,1.6407,0.13034,12.587,{"v":2.48e-36,"d":"2.48E-36"},1.02E-34,"full_name=MLP-like protein 31. MLP-like protein 31.","AT1G64820",null,87.75,2.7088,0.28474,9.5131,{"v":1.85e-21,"d":"1.85E-21"},{"v":7.41e-20,"d":"7.41E-20"},"MATE efflux family protein."]
["AT2G47630","MAGL9",346.05,-1.3209,0.14255,-9.2661,1.93E-20,{"v":8.71e-19,"d":"8.71E-19"},"alpha/beta-Hydrolases superfamily protein.","AT3G54500","LNK2",1207.3,0.92798,0.09506,9.762,{"v":1.64e-22,"d":"1.64E-22"},{"v":7.16e-21,"d":"7.16E-21"},"agglutinin-like protein.","AT4G18650","DOGL4",1319.4,1.3564,0.13227,10.255,{"v":1.13e-24,"d":"1.13E-24"},{"v":4.77e-23,"d":"4.77E-23"},"transcription factor-like protein. A maternally expressed imprinted gene.","AT4G18020","APRR2",119.14,-3.9167,0.31196,-12.555,{"v":3.73e-36,"d":"3.73E-36"},{"v":1.53e-34,"d":"1.53E-34"},"CheY-like two-component responsive regulator family protein. Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9).","AT1G52920","GPCR",602.42,-0.93254,0.098035,-9.5124,1.86E-21,{"v":7.43e-20,"d":"7.43E-20"},"full_name=G protein coupled receptor. G protein coupled receptor. Encodes a plasma membrane%E2%80%93localized ABA receptor, which interacts with the G&#945;&#946;&#947; complex. It has been postulated that the binding of ABA to GCR2 results in the release of the G protein and dissociation of the heterotrimeric complex into G&#945; and the G&#946;&#947; dimer to activate downstream ABA effectors and to trigger the ABA responses."]
["AT3G04190",null,1533,1.5231,0.16442,9.2633,{"v":1.98e-20,"d":"1.98E-20"},{"v":8.91e-19,"d":"8.91E-19"},"RmlC-like cupins superfamily protein.","AT3G25820","TPS-CIN",425.77,1.5354,0.15734,9.7588,1.69E-22,7.37E-21,"full_name=terpene synthase-like sequence-1,8-cineole. terpene synthase-like sequence-1,8-cineole. Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830.","AT5G14780","FDH",3219.9,1.2136,0.11837,10.252,{"v":1.15e-24,"d":"1.15E-24"},{"v":4.88e-23,"d":"4.88E-23"},"full_name=formate dehydrogenase. formate dehydrogenase. Encodes a NAD-dependent formate dehydrogenase.","AT5G24930","COL4",721.49,-1.2738,0.10149,-12.551,{"v":3.93e-36,"d":"3.93E-36"},1.61E-34,"full_name=CONSTANS-like 4. zinc finger CONSTANS-like protein.","AT5G58330","NADP-MDH",1490.8,0.80173,0.08436,9.5036,{"v":2.03e-21,"d":"2.03E-21"},{"v":8.07e-20,"d":"8.07E-20"},"lactate/malate dehydrogenase family protein."]
["AT1G19900","RUBY",7185,1.3765,0.1488,9.251,2.22E-20,{"v":9.97e-19,"d":"9.97E-19"},"glyoxal oxidase-related protein.","AT5G10840","EMP1",640.65,-1.14,0.11717,-9.7297,{"v":2.25e-22,"d":"2.25E-22"},{"v":9.77e-21,"d":"9.77E-21"},"full_name=endomembrane protein 1. Endomembrane protein 70 protein family.","AT3G22640","PAP85",72840,0.93257,0.09098,10.25,1.18E-24,{"v":4.97e-23,"d":"4.97E-23"},"cupin family protein.","AT3G14660","CYP72A13",1367.1,1.2019,0.095762,12.55,{"v":3.96e-36,"d":"3.96E-36"},1.61E-34,"full_name=cytochrome P450, family 72, subfamily A, polypeptide 13. cytochrome P450, family 72, subfamily A, polypeptide 13. putative cytochrome P450","AT5G08790","ATAF2",371.68,1.3255,0.13958,9.4966,2.17E-21,{"v":8.61e-20,"d":"8.61E-20"},"NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. induced by wounding, belongs to a large family of putative transcriptional activators with NAC domain."]
["AT3G54400",null,125.13,-2.5905,0.28059,-9.2324,{"v":2.65e-20,"d":"2.65E-20"},{"v":1.18e-18,"d":"1.18E-18"},"Eukaryotic aspartyl protease family protein.","AT1G26680",null,67.826,-5.2909,0.54379,-9.7297,{"v":2.25e-22,"d":"2.25E-22"},{"v":9.77e-21,"d":"9.77E-21"},"transcriptional factor B3 family protein.","AT4G15550","IAGLU",66.039,3.493,0.34084,10.248,{"v":1.21e-24,"d":"1.21E-24"},5.07E-23,"full_name=indole-3-acetate beta-D-glucosyltransferase. indole-3-acetate beta-D-glucosyltransferase. UDP-glucose:indole-3-acetate beta-D-glucosyltransferase","AT1G06430","FTSH8",605.86,-1.7237,0.1374,-12.545,{"v":4.23e-36,"d":"4.23E-36"},{"v":1.72e-34,"d":"1.72E-34"},"full_name=FTSH protease 8. FTSH protease 8. encodes a FtsH protease that is localized to the chloroplast","AT3G25890","CRF11",217.1,1.5892,0.16746,9.49,{"v":2.31e-21,"d":"2.31E-21"},{"v":9.15e-20,"d":"9.15E-20"},"full_name=cytokinin response factor 11. Integrase-type DNA-binding superfamily protein. encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11."]
["AT5G02380","MT2B",3152.2,0.78985,0.085758,9.2102,{"v":3.25e-20,"d":"3.25E-20"},1.45E-18,"full_name=metallothionein 2B. metallothionein 2B. cysteine-rich protein with copper-binding activity","AT4G15390",null,113.29,2.2453,0.23082,9.7271,2.31E-22,{"v":9.99e-21,"d":"9.99E-21"},"HXXXD-type acyl-transferase family protein.","AT2G01200","IAA32",166.68,-3.0194,0.29471,-10.245,1.24E-24,{"v":5.2E-23,"d":"5.20E-23"},"full_name=indole-3-acetic acid inducible 32. indole-3-acetic acid inducible 32. Belongs to auxin inducible gene family.","AT3G47420","G3Pp1",107.43,-4.0137,0.32037,-12.528,{"v":5.23e-36,"d":"5.23E-36"},{"v":2.12e-34,"d":"2.12E-34"},"full_name=Glycerol-3-phosphate permease 1. putative glycerol-3-phosphate transporter 1. Encodes a Pi starvation-responsive protein AtPS3. A member of the phosphate starvation-induced glycerol-3-phosphate permease gene family: AT3G47420(G3Pp1), AT4G25220(G3Pp2), AT1G30560(G3Pp3), AT4G17550(G3Pp4) and AT2G13100(G3Pp5). Its expression is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots.","AT4G23493",null,213.52,-1.7194,0.18151,-9.4727,{"v":2.73e-21,"d":"2.73E-21"},1.08E-19,"hypothetical protein."]
["AT4G31840","ENODL15",56.144,-3.9909,0.43384,-9.1988,{"v":3.62e-20,"d":"3.62E-20"},{"v":1.61e-18,"d":"1.61E-18"},"full_name=early nodulin-like protein 15. early nodulin-like protein 15.","AT4G03200",null,1840.1,0.93331,0.095968,9.7252,{"v":2.36e-22,"d":"2.36E-22"},1.02E-20,"catalytics.","AT3G45780","PHOT1",203.87,2.3101,0.22616,10.214,{"v":1.71e-24,"d":"1.71E-24"},{"v":7.16e-23,"d":"7.16E-23"},"full_name=phototropin 1. phototropin 1. Blue-light photoreceptor. Contains a light activated serine-threonine kinase domain and LOV1 and LOV2 repeats. Mutants are defective in blue-light response. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT1 undergoes blue-light-dependent autophosphorylation. At least eight phosphorylation sites have been identified in PHOT1. Phosphorylation of serine851 in the activation loop of PHOT1 appears to be required for stomatal opening, chloroplast accumulation, leaf flattening, and phototropism, and phosphorylation of serine849 may also contribute to the regulation of these responses. Phosphorylation-dependent binding of 14-3-3 proteins to the Hinge1 region of PHOT1 appears to require serine350 and serine376.","AT2G27040","AGO4",805.23,-1.549,0.1238,-12.512,{"v":6.41e-36,"d":"6.41E-36"},{"v":2.59e-34,"d":"2.59E-34"},"full_name=ARGONAUTE 4. Argonaute family protein. AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.","ATMG01190","atp1",140.69,2.4279,0.25694,9.4496,{"v":3.4E-21,"d":"3.40E-21"},{"v":1.34e-19,"d":"1.34E-19"}]
["AT1G21500",null,53.252,-5.0486,0.54985,-9.1817,{"v":4.24e-20,"d":"4.24E-20"},1.88E-18,"hypothetical protein.","AT3G61040","CYP76C7",65.667,3.7239,0.38316,9.7189,{"v":2.5e-22,"d":"2.50E-22"},1.08E-20,"full_name=cytochrome P450, family 76, subfamily C, polypeptide 7. cytochrome P450, family 76, subfamily C, polypeptide 7. encodes a protein with cytochrome P450 domain","AT3G03520","NPC3",244.4,1.7662,0.17302,10.208,1.83E-24,{"v":7.62e-23,"d":"7.62E-23"},"full_name=non-specific phospholipase C3. non-specific phospholipase C3. Lysophosphatidic acid phosphatase highly expressed during phosphate starvation and abiotic stresses. Role in lipid synthesis.","AT1G51035",null,118.04,-4.388,0.35073,-12.511,{"v":6.49e-36,"d":"6.49E-36"},2.62E-34,"hypothetical protein.","AT2G27510","FD3",950.35,1.2467,0.13198,9.446,{"v":3.52e-21,"d":"3.52E-21"},{"v":1.38e-19,"d":"1.38E-19"},"full_name=ferredoxin 3. ferredoxin 3."]
["AT5G55970",null,477.13,-1.4275,0.15555,-9.1771,{"v":4.43e-20,"d":"4.43E-20"},1.96E-18,"RING/U-box superfamily protein.","AT4G29240",null,119.39,-2.2277,0.22924,-9.7181,{"v":2.53e-22,"d":"2.53E-22"},1.08E-20,"Leucine-rich repeat (LRR) family protein.","AT5G61270","PIF7",206.32,2.0955,0.20541,10.201,1.95E-24,{"v":8.13e-23,"d":"8.13E-23"},"full_name=phytochrome-interacting factor7. phytochrome-interacting factor7. Basic helix-loop-helix (bHLH) phytochrome interacting factor. Interacts specifically with the far-red light%E2%80%93absorbing Pfr form of phyB through a conserved domain called the active phyB binding motif. Upon light exposure, PIF7 rapidly migrates to intranuclear speckles, where it colocalizes with phyB. Role as negative regulator of phyB-mediated seedling deetiolation.","AT1G19835","TCS1",162.96,-3.1362,0.25072,-12.509,{"v":6.67e-36,"d":"6.67E-36"},{"v":2.68e-34,"d":"2.68E-34"},"filament-like protein (DUF869).","AT4G12560","CPR1",693.03,0.92976,0.098436,9.4453,{"v":3.54e-21,"d":"3.54E-21"},{"v":1.39e-19,"d":"1.39E-19"},"full_name=CONSTITUTIVE EXPRESSER OF PR GENES 1. F-box and associated interaction domains-containing protein. Encodes CPR1 (Constitutive Expresser of PR Genes 1, also known as CPR30), a F-Box protein that functions as a negative regulator of defense response and targets resistance proteins."]
["AT5G24530","DMR6",164.5,1.684,0.1844,9.1324,{"v":6.7e-20,"d":"6.70E-20"},2.96E-18,"full_name=DOWNY MILDEW RESISTANT 6. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.","AT4G22100","BGLU3",1645,1.0114,0.10415,9.7108,{"v":2.71e-22,"d":"2.71E-22"},1.16E-20,"full_name=beta glucosidase 2. beta glucosidase 2.","AT2G21060","GRP2B",513.39,1.4174,0.13908,10.191,{"v":2.17e-24,"d":"2.17E-24"},{"v":9.02e-23,"d":"9.02E-23"},"full_name=glycine-rich protein 2B. glycine-rich protein 2B. Glycine-rich protein (AtGRP2b). Also named as CSP4 (cold shock domain protein 4) containing a well conserved cold shock domain (CSD) and glycine-rich motifs interspersed by two retroviral-like CCHC zinc fingers. AtCSP4 is expressed in all tissues but accumulates in reproductive tissues and those undergoing cell divisions. Overexpression of AtCSP4 reduces silique length and induces embryo lethality.","AT3G62730",null,3238.5,-4.6009,0.36798,-12.503,{"v":7.18e-36,"d":"7.18E-36"},{"v":2.88e-34,"d":"2.88E-34"},"desiccation-like protein.","AT1G23710",null,341.37,1.3743,0.14551,9.4451,{"v":3.55e-21,"d":"3.55E-21"},{"v":1.39e-19,"d":"1.39E-19"},"hypothetical protein (DUF1645)."]
["AT3G53190",null,60.34,-5.618,0.61575,-9.1239,{"v":7.25e-20,"d":"7.25E-20"},{"v":3.2e-18,"d":"3.20E-18"},"Pectin lyase-like superfamily protein.","AT5G54070","HSFA9",63.183,4.4752,0.46092,9.7092,{"v":2.75e-22,"d":"2.75E-22"},{"v":1.18e-20,"d":"1.18E-20"},"full_name=heat shock transcription factor A9. heat shock transcription factor A9. A member of Heat Stress Transcription Factor (Hsf) family. Not responding to heat stress. Is regulated by the seed-specific transcription factor ABI3. In turn, it regulates other heat stress proteins including Hsp17.4-CI, Hsp17.7-CII and Hsp101 during seed maturation.","AT3G14240",null,107.44,-3.1617,0.31056,-10.181,{"v":2.41e-24,"d":"2.41E-24"},{"v":1E-22,"d":"1.00E-22"},"Subtilase family protein.","AT5G55180",null,109.99,-5.6947,0.45571,-12.496,{"v":7.83e-36,"d":"7.83E-36"},{"v":3.13e-34,"d":"3.13E-34"},"O-Glycosyl hydrolases family 17 protein.","AT3G26690","NUDX13",174.3,1.8821,0.19928,9.4446,{"v":3.57e-21,"d":"3.57E-21"},{"v":1.39e-19,"d":"1.39E-19"},"full_name=nudix hydrolase homolog 13. nudix hydrolase homolog 13. Encodes AtNUDT13, a mitochondrial Nudix hydrolase specific for long-chain diadenosine polyphosphates."]
["AT4G12680",null,452.77,1.4972,0.16411,9.1229,{"v":7.31e-20,"d":"7.31E-20"},{"v":3.22e-18,"d":"3.22E-18"},"transmembrane protein.","AT2G01140","PDE345",1451.5,-1.0008,0.10352,-9.6678,4.13E-22,1.76E-20,"full_name=PIGMENT DEFECTIVE 345. Aldolase superfamily protein.","AT5G61510",null,967,1.2914,0.12696,10.171,{"v":2.66e-24,"d":"2.66E-24"},{"v":1.1E-22,"d":"1.10E-22"},"GroES-like zinc-binding alcohol dehydrogenase family protein.","AT1G75450","CKX5",94.547,-4.5495,0.36408,-12.496,{"v":7.84e-36,"d":"7.84E-36"},{"v":3.13e-34,"d":"3.13E-34"},"full_name=cytokinin oxidase 5. cytokinin oxidase 5. This gene used to be called AtCKX6. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.","AT5G48570","ROF2",163.03,-1.7763,0.1882,-9.4383,{"v":3.79e-21,"d":"3.79E-21"},1.48E-19,"FKBP-type peptidyl-prolyl cis-trans isomerase family protein. Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones."]
["AT2G32640","LCYB",290.45,-1.2816,0.14055,-9.1179,{"v":7.66e-20,"d":"7.66E-20"},{"v":3.36e-18,"d":"3.36E-18"},"Lycopene beta/epsilon cyclase protein.","AT2G04030","CR88",899.86,1.0731,0.11105,9.6633,{"v":4.32e-22,"d":"4.32E-22"},1.84E-20,"Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response and crucial for protein import into the chloroplast stroma. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR.","AT3G29320","PHS1",89.176,-3.6626,0.36031,-10.165,2.84E-24,1.17E-22,"full_name=alpha-glucan phosphorylase 1. Glycosyl transferase, family 35. Encodes a plastidic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for maltooligosaccharides, such as maltoheptaose.","AT1G11700",null,154.62,-2.7218,0.21799,-12.486,8.88E-36,{"v":3.54e-34,"d":"3.54E-34"},"senescence regulator (Protein of unknown function, DUF584).","AT4G36530",null,1002.3,-0.78208,0.082925,-9.4311,{"v":4.06e-21,"d":"4.06E-21"},1.58E-19,"alpha/beta-Hydrolases superfamily protein."]
["AT2G25520",null,2724.7,0.82401,0.090461,9.109,{"v":8.31e-20,"d":"8.31E-20"},{"v":3.64e-18,"d":"3.64E-18"},"Drug/metabolite transporter superfamily protein.","AT5G56890",null,238.08,-1.5195,0.15727,-9.6616,{"v":4.39e-22,"d":"4.39E-22"},{"v":1.86e-20,"d":"1.86E-20"},"Protein kinase superfamily protein.","AT5G43810","AGO10",141.58,-2.1612,0.21264,-10.163,{"v":2.89e-24,"d":"2.89E-24"},{"v":1.19e-22,"d":"1.19E-22"},"full_name=ARGONAUTE 10. Stabilizer of iron transporter SufD / Polynucleotidyl transferase. Encodes Argonaute10, a member of the EIF2C (elongation initiation factor 2c)/ Argonaute class of proteins. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes, controls the relative organization of central zone and peripheral zone cells in meristems. Acts in embryonic provascular tissue potentiating WUSCHEL function during meristem development in the embryo. AGO10 specifically sequesters miR166/165 to regulate shoot apical meristem development.","AT1G77380","AAP3",158.31,-7.0605,0.56592,-12.476,1.01E-35,{"v":4e-34,"d":"4.00E-34"},"full_name=amino acid permease 3. amino acid permease 3. Amino acid permease which transports basic amino acids.","AT1G19000",null,1488.7,0.71958,0.076332,9.4269,4.22E-21,1.64E-19,"Homeodomain-like superfamily protein."]
["AT3G15280",null,214,1.577,0.17324,9.103,{"v":8.79e-20,"d":"8.79E-20"},{"v":3.84e-18,"d":"3.84E-18"},"hypothetical protein.","AT3G18090","NRPD2B",245.06,-1.6716,0.17323,-9.6495,{"v":4.94e-22,"d":"4.94E-22"},{"v":2.09e-20,"d":"2.09E-20"},"full_name=nuclear RNA polymerase D2B. nuclear RNA polymerase D2B. Encodes a subunit of RNA polymerase IV (aka RNA polymerase D). NRPD2b is closely related to NRPD2a, but has lower levels of transcription and does not affect endogenous siRNA when mutated.","AT1G50430","DWF5",158.83,-2.1652,0.21337,-10.148,{"v":3.4e-24,"d":"3.40E-24"},1.39E-22,"full_name=DWARF 5. Ergosterol biosynthesis ERG4/ERG24 family. Mutants are defective in Brassinosteroid biosynthesis (delta7-sterol-C7 reduction step) and have a dwarf phenotype.","AT5G43300","GDPD3",88.756,-4.722,0.37848,-12.476,1.01E-35,{"v":4e-34,"d":"4.00E-34"},"full_name=glycerophosphodiester phosphodiesterase 3. PLC-like phosphodiesterases superfamily protein. Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family.","AT3G07100","ERMO2",1012.8,0.86095,0.091395,9.4201,{"v":4.51e-21,"d":"4.51E-21"},1.74E-19,"full_name=ENDOPLASMIC RETICULUM MORPHOLOGY 2. Sec23/Sec24 protein transport family protein. Encodes SEC24a/ERMO2. Required for endoplasmic reticulum (ER) morphology. Has epistatic interactions with AT1G55350, AT3G59420, and AT3G10525."]
["AT5G01670",null,4409.9,1.1187,0.12291,9.102,{"v":8.86e-20,"d":"8.86E-20"},{"v":3.86e-18,"d":"3.86E-18"},"NAD(P)-linked oxidoreductase superfamily protein.","AT5G22470","ADP-RIBOSE",11271,1.0787,0.1118,9.6484,{"v":4.99e-22,"d":"4.99E-22"},{"v":2.11e-20,"d":"2.11E-20"},"poly ADP-ribose polymerase 3.","AT5G16400","TRXF2",186.09,-1.9858,0.19585,-10.14,{"v":3.69e-24,"d":"3.69E-24"},{"v":1.51e-22,"d":"1.51E-22"},"full_name=thioredoxin F2. thioredoxin F2. Encodes an f-type thioredoxin (Trx-f2) localized in chloroplast stroma.","AT1G09970","LRR XI-23",2440.5,0.99132,0.079471,12.474,1.03E-35,{"v":4.09e-34,"d":"4.09E-34"},"Leucine-rich receptor-like protein kinase family protein. RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress.","AT5G66730","IDD1",3803.8,0.58486,0.062146,9.411,4.91E-21,{"v":1.89e-19,"d":"1.89E-19"},"full_name=INDETERMINATE DOMAIN 1. C2H2-like zinc finger protein."]
["AT1G53270","ABCG10",336.44,-1.2621,0.13891,-9.0857,1.03E-19,4.48E-18,"full_name=ATP-binding cassette G10. ABC-2 type transporter family protein.","AT2G26730",null,92.636,-2.4088,0.24994,-9.6377,{"v":5.54e-22,"d":"5.54E-22"},2.33E-20,"Leucine-rich repeat protein kinase family protein.","AT3G15180",null,1013,1.2008,0.1186,10.125,4.27E-24,{"v":1.74e-22,"d":"1.74E-22"},"ARM repeat superfamily protein.","AT2G31200","ADF6",212.95,-2.1806,0.17485,-12.471,{"v":1.07e-35,"d":"1.07E-35"},{"v":4.22e-34,"d":"4.22E-34"},"full_name=actin depolymerizing factor 6. actin depolymerizing factor 6. Encodes actin depolymerizing factor 6 (ADF6).","AT1G11480",null,991.76,0.83108,0.088312,9.4107,{"v":4.93e-21,"d":"4.93E-21"},{"v":1.89e-19,"d":"1.89E-19"},"eukaryotic translation initiation factor-like protein."]
["AT4G32500","KT5",157.78,-1.7453,0.19212,-9.0843,1.04E-19,{"v":4.52e-18,"d":"4.52E-18"},"full_name=K+ transporter 5. K+ transporter 5. Encodes AKT5, a member of the Shaker family potassium ion (K+) channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).","AT3G49570","LSU3",100.11,3.3609,0.34883,9.635,{"v":5.69e-22,"d":"5.69E-22"},{"v":2.39e-20,"d":"2.39E-20"},"full_name=RESPONSE TO LOW SULFUR 3. response to low sulfur 3.","AT5G46290","KASI",512.93,-2.6545,0.26258,-10.109,{"v":5.03e-24,"d":"5.03E-24"},2.05E-22,"full_name=3-ketoacyl-acyl carrier protein synthase I. 3-ketoacyl-acyl carrier protein synthase I. Encodes beta-ketoacyl-[acyl carrier protein] synthase I (KASI). Crucial for fatty acid synthesis. Plays a role in chloroplast division and embryo development.","AT4G15390",null,1038,1.6849,0.13511,12.471,{"v":1.07e-35,"d":"1.07E-35"},{"v":4.22e-34,"d":"4.22E-34"},"HXXXD-type acyl-transferase family protein.","AT5G15870",null,288.03,1.3106,0.13934,9.4062,{"v":5.14e-21,"d":"5.14E-21"},{"v":1.97e-19,"d":"1.97E-19"},"glycosyl hydrolase family 81 protein."]
["AT2G36830","GAMMA-TIP",95.14,-2.3026,0.25383,-9.0714,{"v":1.17e-19,"d":"1.17E-19"},{"v":5.08e-18,"d":"5.08E-18"},"full_name=gamma tonoplast intrinsic protein. gamma tonoplast intrinsic protein. Encodes a tonoplast intrinsic protein, which functions as water channel. It has also been shown to be able to facilitate the transport of urea and hydrogen peroxide. Highly expressed in vascular tissues of the root, stem, cauline leaves and flowers but not in the apical meristems.","AT3G23175",null,601.3,1.4905,0.15473,9.6331,{"v":5.79e-22,"d":"5.79E-22"},2.43E-20,"HR-like lesion-inducing protein-like protein.","AT2G05990","MOD1",375.25,-2.4639,0.24405,-10.096,{"v":5.77e-24,"d":"5.77E-24"},2.34E-22,"full_name=MOSAIC DEATH 1. NAD(P)-binding Rossmann-fold superfamily protein. Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves.","AT4G26420","GAMT1",106.57,-4.3833,0.35161,-12.466,1.14E-35,{"v":4.46e-34,"d":"4.46E-34"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. A member of the Arabidopsis SABATH methyltransferase gene family. Encodes GAMT1, a methyltransferase that uses S-adenosine-L-methionine (SAM) as a methyl donor to methylate the carboxyl group of GAs, resulting in the methyl esters of GAs (MeGAs). Expressed most highly in the siliques during seed development.","AT3G06355",null,3279.7,1.1213,0.11936,9.3939,{"v":5.78e-21,"d":"5.78E-21"},{"v":2.21e-19,"d":"2.21E-19"}]
["AT2G16750",null,306.29,-1.5321,0.16892,-9.0702,1.19E-19,{"v":5.13e-18,"d":"5.13E-18"},"kinase with adenine nucleotide alpha hydrolases-like domain-containing protein.","AT1G53280","DJ1B",432.79,-1.1611,0.12063,-9.625,6.27E-22,2.62E-20,"full_name=DJ-1 homolog B. Class I glutamine amidotransferase-like superfamily protein. Encodes a homolog of animal DJ-1 superfamily protein. In the A. thaliana genome, three genes encoding close homologs of human DJ-1 were identified AT3G14990 (DJ1A), AT1G53280 (DJ1B) and AT4G34020 (DJ1C). Among the three homologs, DJ1C is essential for chloroplast development and viability. It exhibits glyoxalase activity towards glyoxal and methylglyoxal.","AT1G45688","CC1",270.91,-1.5144,0.15013,-10.087,{"v":6.29e-24,"d":"6.29E-24"},{"v":2.55e-22,"d":"2.55E-22"},"transmembrane protein.","AT1G08810","MYB60",113.79,-5.4612,0.43811,-12.465,{"v":1.15e-35,"d":"1.15E-35"},4.52E-34,"full_name=myb domain protein 60. myb domain protein 60. putative transcription factor of the R2R3-MYB gene family. Transcript increases under conditions that promote stomatal opening (white and blue light, abi1-1 mutation) and decreases under conditions that trigger stomatal closure (ABA, desiccation, darkness), with the exception of elevated CO2. Expressed exclusively in guard cells of all tissues. It is required for light-induced opening of stomata. Mutant shows reduced stomatal aperture which helps to limit water loss during drought.","AT3G17520","SSLEA",52176,-0.69504,0.074043,-9.3869,{"v":6.18e-21,"d":"6.18E-21"},{"v":2.36e-19,"d":"2.36E-19"},"Late embryogenesis abundant protein (LEA) family protein."]
["AT5G07010","ST2A",863.43,0.99871,0.11024,9.0594,{"v":1.31e-19,"d":"1.31E-19"},5.65E-18,"full_name=sulfotransferase 2A. sulfotransferase 2A. Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).","AT3G25860","LTA2",440.02,-1.2918,0.13428,-9.6201,{"v":6.58e-22,"d":"6.58E-22"},{"v":2.74e-20,"d":"2.74E-20"},"2-oxoacid dehydrogenases acyltransferase family protein. Nuclear encoded dihydrolipoamide S-acetyltransferase (LTA2) that encodes teh Pyruvate Decarboxylase E2 subunit. Mutant has embryo defect.","AT5G39050","PMAT1",77.093,3.3074,0.32789,10.087,{"v":6.3e-24,"d":"6.30E-24"},{"v":2.55e-22,"d":"2.55E-22"},"full_name=phenolic glucoside malonyltransferase 1. HXXXD-type acyl-transferase family protein. Encodes a malonyltransferase that may play a role in phenolic xenobiotic detoxification.","AT5G39190","GER2",93.946,-5.1812,0.41589,-12.458,{"v":1.27e-35,"d":"1.27E-35"},{"v":4.95e-34,"d":"4.95E-34"},"full_name=germin-like protein 2. germin-like protein 2. germin-like protein (GLP2a)","AT4G37370","CYP81D8",255.72,1.4916,0.15892,9.3857,{"v":6.25e-21,"d":"6.25E-21"},2.38E-19,"full_name=cytochrome P450, family 81, subfamily D, polypeptide 8. cytochrome P450, family 81, subfamily D, polypeptide 8. member of CYP81D"]
["AT3G02570","MEE31",621.42,1.1715,0.12933,9.058,{"v":1.33e-19,"d":"1.33E-19"},{"v":5.7e-18,"d":"5.70E-18"},"full_name=MATERNAL EFFECT EMBRYO ARREST 31. Mannose-6-phosphate isomerase, type I. Encodes a protein with phosphomannose isomerase activity.","AT3G06035",null,219.1,-1.6026,0.16667,-9.6154,{"v":6.89e-22,"d":"6.89E-22"},{"v":2.86e-20,"d":"2.86E-20"},"Glycoprotein membrane precursor GPI-anchored.","AT5G44720",null,414.23,-1.5716,0.1559,-10.081,{"v":6.72e-24,"d":"6.72E-24"},{"v":2.71e-22,"d":"2.71E-22"},"Molybdenum cofactor sulfurase family protein.","AT1G02310","MAN1",349.66,-2.0757,0.16728,-12.408,2.36E-35,{"v":9.21e-34,"d":"9.21E-34"},"full_name=endo-beta-mannanase 1. Glycosyl hydrolase superfamily protein.","AT3G26330","CYP71B37",332.17,-1.4382,0.15338,-9.3768,{"v":6.8E-21,"d":"6.80E-21"},{"v":2.58e-19,"d":"2.58E-19"},"full_name=cytochrome P450, family 71, subfamily B, polypeptide 37. cytochrome P450, family 71, subfamily B, polypeptide 37. putative cytochrome P450"]
["AT4G11040","RDO5",196.94,1.9374,0.2139,9.0576,{"v":1.33e-19,"d":"1.33E-19"},{"v":5.71e-18,"d":"5.71E-18"},"Protein phosphatase 2C family protein. Encodes a nuclear localized protein with sequence similarity to PP2C phosphatases that is involved in seed dormancy. Loss of function mutations have reduced seed dormancy but does not act through ABA or DOG1 pathways.","AT5G16150","PGLCT",494.95,-1.1908,0.12407,-9.5982,{"v":8.14e-22,"d":"8.14E-22"},{"v":3.38e-20,"d":"3.38E-20"},"full_name=plastidic GLC translocator. plastidic GLC translocator. Encodes a putative plastidic glucose transporter.","AT2G23320","WRKY15",400.51,1.4079,0.13972,10.076,{"v":7.06e-24,"d":"7.06E-24"},{"v":2.84e-22,"d":"2.84E-22"},"full_name=WRKY DNA-binding protein 15. WRKY DNA-binding protein 15. Encodes WRKY DNA-binding protein 15 (WRKY15).","AT5G02230",null,139.67,-5.0256,0.40559,-12.391,{"v":2.93e-35,"d":"2.93E-35"},{"v":1.14e-33,"d":"1.14E-33"},"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein.","AT5G22740","CSLA02",62.871,3.6462,0.38969,9.3569,{"v":8.21e-21,"d":"8.21E-21"},{"v":3.11e-19,"d":"3.11E-19"},"full_name=cellulose synthase-like A02. cellulose synthase-like A02. encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein"]
["AT1G41830","SKS6",646.75,1.1875,0.13122,9.0498,1.43E-19,{"v":6.12e-18,"d":"6.12E-18"},"full_name=SKU5-similar 6. SKU5-similar 6.","AT4G10770","OPT7",176.21,-1.8338,0.19116,-9.5927,{"v":8.58e-22,"d":"8.58E-22"},{"v":3.55e-20,"d":"3.55E-20"},"full_name=oligopeptide transporter 7. oligopeptide transporter 7. oligopeptide transporter","AT5G62890",null,78.278,-3.0576,0.30378,-10.065,{"v":7.88e-24,"d":"7.88E-24"},{"v":3.16e-22,"d":"3.16E-22"},"Xanthine/uracil permease family protein.","AT3G46660","UGT76E12",515.33,1.5645,0.12628,12.389,{"v":2.99e-35,"d":"2.99E-35"},{"v":1.16e-33,"d":"1.16E-33"},"full_name=UDP-glucosyl transferase 76E12. UDP-glucosyl transferase 76E12.","AT2G19320",null,776.57,-1.25,0.13371,-9.3487,{"v":8.87e-21,"d":"8.87E-21"},{"v":3.36e-19,"d":"3.36E-19"},"hypothetical protein."]
["AT5G66780",null,1173.8,1.5213,0.16814,9.0475,{"v":1.46e-19,"d":"1.46E-19"},{"v":6.24e-18,"d":"6.24E-18"},"late embryogenesis abundant protein.","AT2G25340","VAMP712",94.324,2.3632,0.24637,9.5922,{"v":8.62e-22,"d":"8.62E-22"},{"v":3.56e-20,"d":"3.56E-20"},"full_name=vesicle-associated membrane protein 712. vesicle-associated membrane protein 712. Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family.","AT3G21690",null,545.9,1.4484,0.14407,10.053,{"v":8.88e-24,"d":"8.88E-24"},{"v":3.55e-22,"d":"3.55E-22"},"MATE efflux family protein.","AT2G38230","PDX1.1",267.9,2.2507,0.18207,12.362,{"v":4.2E-35,"d":"4.20E-35"},{"v":1.63e-33,"d":"1.63E-33"},"full_name=pyridoxine biosynthesis 1.1. pyridoxine biosynthesis 1.1. Encodes a protein predicted to function in tandem with PDX2 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis.","AT2G08660",null,155.1,1.9382,0.20737,9.3465,{"v":9.06e-21,"d":"9.06E-21"},{"v":3.42e-19,"d":"3.42E-19"},"Natural antisense transcript overlaps with AT2G34390. Natural antisense transcript overlaps with AT2G34390"]
["AT5G54960","PDC2",561.3,1.0228,0.11312,9.0419,{"v":1.54e-19,"d":"1.54E-19"},{"v":6.55e-18,"d":"6.55E-18"},"full_name=pyruvate decarboxylase-2. pyruvate decarboxylase-2. pyruvate decarboxylase-2","AT4G14695","MPC2",173.85,-1.7955,0.18723,-9.5896,{"v":8.84e-22,"d":"8.84E-22"},{"v":3.64e-20,"d":"3.64E-20"},"Uncharacterized protein family (UPF0041).","AT2G16570","ASE1",246.39,1.6406,0.16319,10.053,{"v":8.88e-24,"d":"8.88E-24"},{"v":3.55e-22,"d":"3.55E-22"},"full_name=GLN phosphoribosyl pyrophosphate amidotransferase 1. GLN phosphoribosyl pyrophosphate amidotransferase 1. Amidophosphoribosyltransferase (ATase: EC 2.4.2.14) is a key enzyme in the pathway of purine nucleotide biosynthesis","AT3G06355",null,1041.2,1.9111,0.15464,12.358,{"v":4.39e-35,"d":"4.39E-35"},{"v":1.7E-33,"d":"1.70E-33"},null,"AT2G20770","GCL2",1289.9,-0.68019,0.072783,-9.3454,{"v":9.16e-21,"d":"9.16E-21"},{"v":3.45e-19,"d":"3.45E-19"},"full_name=GCR2-like 2. GCR2-like 2. Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor.GCL2 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase."]
["AT3G02890","AIPP2",1339.8,0.93199,0.10319,9.032,1.69E-19,{"v":7.15e-18,"d":"7.15E-18"},"RING/FYVE/PHD zinc finger superfamily protein.","AT4G09160","PATL5",118.79,-2.2502,0.23486,-9.5813,{"v":9.58e-22,"d":"9.58E-22"},{"v":3.94e-20,"d":"3.94E-20"},"SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein.","AT4G38380",null,297.92,1.7694,0.17618,10.044,{"v":9.8e-24,"d":"9.80E-24"},{"v":3.91e-22,"d":"3.91E-22"},"MATE efflux family protein.","AT5G50260","CEP1",765.29,-6.0016,0.48603,-12.348,4.97E-35,{"v":1.92e-33,"d":"1.92E-33"},"full_name=cysteine endopeptidase 1. Cysteine proteinases superfamily protein. Encodes a papain-like cysteine protease involved in tapetal programmed cell death and pollen development.","AT3G56350",null,26961,-0.64108,0.068661,-9.3368,{"v":9.93e-21,"d":"9.93E-21"},{"v":3.73e-19,"d":"3.73E-19"},"Iron/manganese superoxide dismutase family protein."]
["AT3G14680","CYP72A14",48.967,4.7644,0.52803,9.023,{"v":1.83e-19,"d":"1.83E-19"},{"v":7.75e-18,"d":"7.75E-18"},"full_name=cytochrome P450, family 72, subfamily A, polypeptide 14. cytochrome P450, family 72, subfamily A, polypeptide 14. putative cytochrome P450","AT4G05110","ENT6",793.26,-1.0494,0.10965,-9.5708,{"v":1.06e-21,"d":"1.06E-21"},4.35E-20,"full_name=equilibrative nucleoside transporter 6. equilibrative nucleoside transporter 6.","AT1G22990","HIPP22",212.79,-2.4768,0.24673,-10.038,{"v":1.03e-23,"d":"1.03E-23"},{"v":4.11e-22,"d":"4.11E-22"},"full_name=heavy metal associated isoprenylated plant protein 22. Heavy metal transport/detoxification superfamily protein.","AT3G61880","CYP78A9",1363.3,-5.8009,0.47073,-12.323,{"v":6.78e-35,"d":"6.78E-35"},{"v":2.61e-33,"d":"2.61E-33"},"full_name=cytochrome p450 78a9. cytochrome p450 78a9. Encodes a cytochrome p450 monooxygenase. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis.","AT3G02750",null,599.25,1.1974,0.12827,9.3348,1.01E-20,{"v":3.79e-19,"d":"3.79E-19"},"Protein phosphatase 2C family protein."]
["AT2G22240","MIPS2",1574.8,0.92846,0.10291,9.0219,1.85E-19,{"v":7.81e-18,"d":"7.81E-18"},"full_name=myo-inositol-1-phosphate synthase 2. myo-inositol-1-phosphate synthase 2. ** Referred to as MIPS1 in Mitsuhashi et al 2008. Myo-inositol-1-phosphate synthase isoform 2. Expressed in leaf, root and silique. Immunolocalization experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.","AT4G16620","UMAMIT8",1928.2,0.87631,0.091653,9.5612,{"v":1.16e-21,"d":"1.16E-21"},{"v":4.76e-20,"d":"4.76E-20"},"full_name=Usually multiple acids move in and out Transporters 8. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT5G55620",null,2017.4,-1.7868,0.17811,-10.032,{"v":1.1E-23,"d":"1.10E-23"},{"v":4.36e-22,"d":"4.36E-22"},"hypothetical protein.","AT4G01430","UMAMIT29",183.95,-4.1208,0.33467,-12.313,{"v":7.7e-35,"d":"7.70E-35"},{"v":2.95e-33,"d":"2.95E-33"},"full_name=Usually multiple acids move in and out Transporters 29. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT1G06690",null,240.57,-1.3305,0.14255,-9.3339,1.02E-20,{"v":3.81e-19,"d":"3.81E-19"},"NAD(P)-linked oxidoreductase superfamily protein."]
["AT1G12900","GAPA-2",860.37,-1.5487,0.17177,-9.016,1.95E-19,{"v":8.22e-18,"d":"8.22E-18"},"full_name=glyceraldehyde 3-phosphate dehydrogenase A subunit 2. glyceraldehyde 3-phosphate dehydrogenase A subunit 2.","AT4G09600","GASA3",8093.7,0.82596,0.086475,9.5515,{"v":1.28e-21,"d":"1.28E-21"},5.22E-20,"full_name=GAST1 protein homolog 3. GAST1 protein homolog 3. One of GASA gene family which is related to a GA-stimulated transcript (GAST) from tomato.","AT3G06650","ACLB-1",246.02,-1.6898,0.16881,-10.01,{"v":1.38e-23,"d":"1.38E-23"},{"v":5.47e-22,"d":"5.47E-22"},"full_name=ATP-citrate lyase B-1. ATP-citrate lyase B-1. One of the two genes encoding subunit B of the trimeric enzyme ATP Citrate lyase","AT4G10120","ATSPS4F",110.91,-4.5737,0.37199,-12.295,{"v":9.6e-35,"d":"9.60E-35"},{"v":3.67e-33,"d":"3.67E-33"},"Sucrose-phosphate synthase family protein. Encodes a protein with putative sucrose-phosphate synthase activity.","AT3G11130","CHC1",858.17,0.81046,0.086921,9.3241,1.12E-20,{"v":4.17e-19,"d":"4.17E-19"},"Clathrin, heavy chain."]
["AT2G43670",null,128.1,-2.428,0.27046,-8.9774,2.77E-19,{"v":1.17e-17,"d":"1.17E-17"},"Carbohydrate-binding X8 domain superfamily protein.","AT5G52570","BETA-OHASE 2",52.73,3.8075,0.39876,9.5485,1.32E-21,{"v":5.36e-20,"d":"5.36E-20"},"full_name=beta-carotene hydroxylase 2. beta-carotene hydroxylase 2. Converts &#946;-carotene to zeaxanthin via cryptoxanthin.","AT1G33240","GTL1",153.83,-2.8428,0.28505,-9.9727,2.01E-23,7.92E-22,"full_name=GT-2-like 1. GT-2-like 1. Encodes a plant transcriptional activator that contains two separate, but similar, trihelix DNA-binding domains, similar to GT-2. Gene is expressed in all aerial parts of the plant, with higher level of expression in siliques. At-GTL2 was thought to be a duplicated copy of this gene but is likely to be a cloning artefact, the result of a chimeric clone. Regulates ploidy-dependent cell growth in trichome.","AT5G53660","GRF7",179.63,-2.6887,0.21943,-12.253,{"v":1.62e-34,"d":"1.62E-34"},{"v":6.19e-33,"d":"6.19E-33"},"full_name=growth-regulating factor 7. growth-regulating factor 7. Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower.","AT5G10960","CAF1I",612.42,0.97705,0.10488,9.3158,1.21E-20,{"v":4.5e-19,"d":"4.50E-19"},"Polynucleotidyl transferase, ribonuclease H-like superfamily protein."]
["AT5G20280","SPS1F",833.15,1.0162,0.11346,8.9558,{"v":3.37e-19,"d":"3.37E-19"},1.41E-17,"full_name=sucrose phosphate synthase 1F. sucrose phosphate synthase 1F. Encodes a protein with putative sucrose-phosphate synthase activity. When the gene was expressed in transgenic tobacco plants, a clear trend for increased SPS activity was noted.","AT3G56370","IRK",74.223,-2.9332,0.30778,-9.5305,{"v":1.57e-21,"d":"1.57E-21"},{"v":6.36e-20,"d":"6.36E-20"},"Leucine-rich repeat protein kinase family protein.","AT1G13960","WRKY4",424.68,1.4679,0.14725,9.9694,2.08E-23,{"v":8.17e-22,"d":"8.17E-22"},"full_name=WRKY DNA-binding protein 4. WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4).","AT1G41830","SKS6",425.25,-1.9488,0.15918,-12.243,{"v":1.83e-34,"d":"1.83E-34"},{"v":6.96e-33,"d":"6.96E-33"},"full_name=SKU5-similar 6. SKU5-similar 6.","AT4G18810",null,246.48,-1.4327,0.15384,-9.3132,{"v":1.24e-20,"d":"1.24E-20"},{"v":4.6e-19,"d":"4.60E-19"},"NAD(P)-binding Rossmann-fold superfamily protein."]
["AT1G08340",null,523.23,1.0997,0.12304,8.9381,3.96E-19,{"v":1.66e-17,"d":"1.66E-17"},"Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein.","AT4G05020","NDB2",167.88,1.8033,0.18947,9.5176,{"v":1.77e-21,"d":"1.77E-21"},{"v":7.19e-20,"d":"7.19E-20"},"full_name=NAD(P)H dehydrogenase B2. NAD(P)H dehydrogenase B2.","AT4G22130","SRF8",115.86,-2.3485,0.23571,-9.9634,{"v":2.2e-23,"d":"2.20E-23"},{"v":8.66e-22,"d":"8.66E-22"},"full_name=STRUBBELIG-receptor family 8. STRUBBELIG-receptor family 8.","AT2G36880","MAT3",128.67,-2.8642,0.23396,-12.242,{"v":1.85e-34,"d":"1.85E-34"},{"v":7.01e-33,"d":"7.01E-33"},"full_name=methionine adenosyltransferase 3. methionine adenosyltransferase 3.","AT1G05894",null,77.574,2.742,0.29495,9.2962,1.46E-20,{"v":5.39e-19,"d":"5.39E-19"},"hypothetical protein."]
["AT3G22600","LTPG5",440.73,-1.3746,0.15389,-8.9327,{"v":4.16e-19,"d":"4.16E-19"},1.74E-17,"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT2G42000","AtMT4a",286.14,2.1713,0.22815,9.5169,{"v":1.78e-21,"d":"1.78E-21"},{"v":7.21e-20,"d":"7.21E-20"},"full_name=Arabidopsis thaliana metallothionein 4a. plant EC metallothionein family protein. AtMT4a is a member of Type 4 metallothionein (MT) genes. It is involved in the early develoment of the embryo and in the accumulation of metal ions especially Zn in the seeds.","AT3G29670","PMAT2",132.8,2.307,0.23176,9.9546,2.41E-23,{"v":9.44e-22,"d":"9.44E-22"},"full_name=phenolic glucoside malonyltransferase 2. HXXXD-type acyl-transferase family protein. Encodes a malonyltransferase that may play a role in phenolic xenobiotic detoxification.","AT2G32970",null,229.38,-1.9811,0.16205,-12.226,{"v":2.27e-34,"d":"2.27E-34"},{"v":8.6e-33,"d":"8.60E-33"},"G1/S-specific cyclin-E protein.","AT5G51440","HSP23.5",149.84,-1.9426,0.20917,-9.2872,{"v":1.58e-20,"d":"1.58E-20"},{"v":5.85e-19,"d":"5.85E-19"},"HSP20-like chaperones superfamily protein."]
["AT1G70670","CLO4",750.1,1.2309,0.13786,8.9287,{"v":4.31e-19,"d":"4.31E-19"},{"v":1.8E-17,"d":"1.80E-17"},"full_name=caleosin 4. Caleosin-related family protein. The gene encodes a stress-responsive and OB-associated non-seed caleosin-like protein. It plays a negative regulator role in ABA signaling.","AT5G22580",null,80.651,-2.7198,0.28604,-9.5086,{"v":1.93e-21,"d":"1.93E-21"},{"v":7.8e-20,"d":"7.80E-20"},"Stress responsive A/B Barrel Domain-containing protein.","AT1G56580","SVB",1037.3,-1.5801,0.15886,-9.9462,{"v":2.62e-23,"d":"2.62E-23"},1.02E-21,"full_name=SMALLER WITH VARIABLE BRANCHES. plant/protein (Protein of unknown function, DUF538). Encodes SMALLER WITH VARIABLE BRANCHES (SVB), a protein with a conserved domain of unknown function (DUF538). The trichomes of the SVB mutants are smaller and exhibit branches of variable length and number.","AT5G08360",null,100.72,-3.2908,0.2696,-12.206,{"v":2.88e-34,"d":"2.88E-34"},1.09E-32,"Stu1, putative (DUF789).","AT1G73210",null,473.87,1.0751,0.11611,9.2595,2.05E-20,7.57E-19,"hypothetical protein (DUF789)."]
["AT5G12250","TUB6",413.14,-1.1904,0.13344,-8.921,{"v":4.62e-19,"d":"4.62E-19"},1.92E-17,"full_name=beta-6 tubulin. beta-6 tubulin. Encodes a beta-tubulin. Expression of TUB6 has been shown to decrease in response to cold treatment.","AT1G03210",null,250.96,-1.4495,0.15252,-9.5038,2.02E-21,{"v":8.14e-20,"d":"8.14E-20"},"Phenazine biosynthesis PhzC/PhzF protein.","AT2G47240","LACS1",491.94,-1.5659,0.15744,-9.9461,{"v":2.62e-23,"d":"2.62E-23"},1.02E-21,"full_name=LONG-CHAIN ACYL-COA SYNTHASE 1. AMP-dependent synthetase and ligase family protein. Encodes an acyl-CoA synthetase that acts on long-chain and very-long-chain fatty acids, involved in cuticular wax and cutin biosynthesis","AT3G21720","ICL",14399,1.058,0.086708,12.202,{"v":3.03e-34,"d":"3.03E-34"},{"v":1.14e-32,"d":"1.14E-32"},"full_name=isocitrate lyase. isocitrate lyase. Encodes a glyoxylate cycle enzyme isocitrate lyase (ICL).","AT2G33051",null,232.03,-1.4083,0.15212,-9.2579,{"v":2.08e-20,"d":"2.08E-20"},{"v":7.66e-19,"d":"7.66E-19"},"Natural antisense transcript overlaps with AT2G33050. Potential natural antisense gene, locus overlaps with AT2G33050 Natural antisense transcript overlaps with AT2G33050"]
["AT3G51640",null,400.57,-1.1491,0.12901,-8.9073,{"v":5.23e-19,"d":"5.23E-19"},2.17E-17,"stress response NST1-like protein.","AT1G28030",null,72.139,-2.8343,0.29837,-9.499,{"v":2.12e-21,"d":"2.12E-21"},{"v":8.51e-20,"d":"8.51E-20"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT1G12230","GSM2-LIKE",158.73,-2.0539,0.20665,-9.9392,{"v":2.81e-23,"d":"2.81E-23"},1.09E-21,"Aldolase superfamily protein.","AT5G05550","VFP5",184.44,2.1459,0.17592,12.198,{"v":3.17e-34,"d":"3.17E-34"},1.19E-32,"sequence-specific DNA binding transcription factor.","AT4G11420","EIF3A",1954.4,0.64587,0.0698,9.2532,{"v":2.18e-20,"d":"2.18E-20"},{"v":7.99e-19,"d":"7.99E-19"},"full_name=eukaryotic translation initiation factor 3A. eukaryotic translation initiation factor 3A. Encodes a subunit of eukaryotic initiation factor 3 (eIF3), a multisubunit complex that is required for binding of mRNA to 40 S ribosomal subunits, stabilization of ternary complex binding to 40 S subunits, and dissociation of 40 and 60 S subunits."]
["AT4G17840","BCM4",1628.7,0.85393,0.09587,8.9071,{"v":5.24e-19,"d":"5.24E-19"},2.17E-17,"CAAX protease self-immunity protein.","AT5G62480","GSTU9",98.925,2.236,0.23569,9.4873,{"v":2.37e-21,"d":"2.37E-21"},{"v":9.5E-20,"d":"9.50E-20"},"full_name=glutathione S-transferase tau 9. glutathione S-transferase tau 9. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","AT1G32900","GBSS1",77.775,-3.3067,0.33341,-9.9177,{"v":3.49e-23,"d":"3.49E-23"},{"v":1.35e-21,"d":"1.35E-21"},"full_name=granule bound starch synthase 1. UDP-Glycosyltransferase superfamily protein.","AT5G14995",null,137.87,-6.2527,0.51266,-12.197,{"v":3.24e-34,"d":"3.24E-34"},1.22E-32,"ECA1 gametogenesis related family protein. Encodes a ECA1 gametogenesis related family protein","AT5G61510",null,1674,-0.70838,0.076636,-9.2435,{"v":2.39e-20,"d":"2.39E-20"},{"v":8.73e-19,"d":"8.73E-19"},"GroES-like zinc-binding alcohol dehydrogenase family protein."]
["AT5G49555",null,322.14,-1.2361,0.13886,-8.9022,{"v":5.48e-19,"d":"5.48E-19"},2.26E-17,"FAD/NAD(P)-binding oxidoreductase family protein.","AT1G16730","UP6",356.31,1.4985,0.158,9.4848,{"v":2.43e-21,"d":"2.43E-21"},{"v":9.71e-20,"d":"9.71E-20"},"full_name=unknown protein 6. hypothetical protein.","AT4G39890","RABH1c",167.89,2.1452,0.21638,9.9143,{"v":3.61e-23,"d":"3.61E-23"},{"v":1.4E-21,"d":"1.40E-21"},"full_name=RAB GTPase homolog H1C. RAB GTPase homolog H1C.","AT4G18530",null,550.61,-1.7481,0.14338,-12.192,{"v":3.41e-34,"d":"3.41E-34"},{"v":1.28e-32,"d":"1.28E-32"},"lysine ketoglutarate reductase trans-splicing-like protein, putative (DUF707).","AT4G30190","HA2",334.45,1.4282,0.15454,9.2416,2.43E-20,{"v":8.87e-19,"d":"8.87E-19"},"full_name=H(+)-ATPase 2. H[+]-ATPase 2. belongs to the P-type ATPase superfamily of cation-transporting ATPases, pumps protons out of the cell, generating a proton gradient that drives the active transport of nutrients by proton symport. has two autoinhibitory regions within the C-terminal dom"]
["AT5G22880","HTB2",111.28,-2.0479,0.23033,-8.8909,{"v":6.06e-19,"d":"6.06E-19"},{"v":2.49e-17,"d":"2.49E-17"},"full_name=histone B2. histone B2. Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.","AT1G70840","MLP31",813.09,1.3239,0.13987,9.4656,{"v":2.92e-21,"d":"2.92E-21"},1.16E-19,"full_name=MLP-like protein 31. MLP-like protein 31.","AT2G27690","CYP94C1",303.54,-1.6472,0.16618,-9.9125,{"v":3.67e-23,"d":"3.67E-23"},1.42E-21,"full_name=cytochrome P450, family 94, subfamily C, polypeptide 1. cytochrome P450, family 94, subfamily C, polypeptide 1. Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.","AT5G16240","AAD1",117.31,-5.5977,0.45991,-12.171,{"v":4.42e-34,"d":"4.42E-34"},{"v":1.65e-32,"d":"1.65E-32"},"Plant stearoyl-acyl-carrier-protein desaturase family protein.","AT3G27670","RST1",268.78,1.3609,0.1476,9.2199,{"v":2.97e-20,"d":"2.97E-20"},1.08E-18,"full_name=RESURRECTION1. ARM repeat superfamily protein. A novel protein, did not show high similarity to any protein of known function; reveals a novel genetic connection between lipid synthesis and embryo development. Expressed in all tissues examined including leaves, flowers, roots, stems, and siliques, but accumulation levels were not correlated with the degree to which different organs appeared affected by the mutation. Mutant plants showed alterations in the cuticular wax profiles and embryo development."]
["AT1G43650","UMAMIT22",136.59,10.604,1.1932,8.8867,{"v":6.29e-19,"d":"6.29E-19"},{"v":2.59e-17,"d":"2.59E-17"},"full_name=Usually multiple acids move in and out Transporters 22. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT3G25160",null,382.81,-1.3,0.13756,-9.4509,{"v":3.36e-21,"d":"3.36E-21"},{"v":1.34e-19,"d":"1.34E-19"},"ER lumen protein retaining receptor family protein.","AT1G68400",null,81.658,-2.8466,0.28743,-9.9038,{"v":4.01e-23,"d":"4.01E-23"},{"v":1.55e-21,"d":"1.55E-21"},"leucine-rich repeat transmembrane protein kinase family protein.","AT5G50240","PIMT2",2203.5,0.94126,0.077355,12.168,{"v":4.6e-34,"d":"4.60E-34"},1.71E-32,"full_name=protein-l-isoaspartate methyltransferase 2. protein-l-isoaspartate methyltransferase 2. L-isoaspartyl methyltransferase 2 (PIMT2)gene, alternatively spliced.","AT2G16500","ADC1",178.86,1.6058,0.17475,9.1895,{"v":3.95e-20,"d":"3.95E-20"},{"v":1.43e-18,"d":"1.43E-18"},"full_name=arginine decarboxylase 1. arginine decarboxylase 1. encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Promoter region of ADC1 contains 742-bp AT-rich transposable element, called AtATE, that belongs to the MITE families of repetitive elements."]
["AT1G02900","RALF1",61.72,-2.7567,0.31053,-8.8774,{"v":6.84e-19,"d":"6.84E-19"},{"v":2.8e-17,"d":"2.80E-17"},"full_name=rapid alkalinization factor 1. rapid alkalinization factor 1. Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. Mediates Ca2+-dependent signaling.","AT2G20770","GCL2",496.56,1.1182,0.11844,9.441,{"v":3.69e-21,"d":"3.69E-21"},{"v":1.47e-19,"d":"1.47E-19"},"full_name=GCR2-like 2. GCR2-like 2. Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor.GCL2 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase.","AT1G08630","THA1",889.23,-1.3651,0.13808,-9.8858,{"v":4.8e-23,"d":"4.80E-23"},{"v":1.85e-21,"d":"1.85E-21"},"full_name=threonine aldolase 1. threonine aldolase 1. Encodes a threonine aldolase, involved in threonine degradation to glycine. Primarily expressed in seeds and seedlings.","AT3G02170","LNG2",93.198,-3.411,0.28065,-12.154,5.46E-34,{"v":2.03e-32,"d":"2.03E-32"},"full_name=LONGIFOLIA2. longifolia2. Encodes LONGIFOLIA2 (LNG2). Regulates leaf morphology by promoting cell expansion in the leaf-length direction. The LNG2 homologue LNG1 (At5g15580) has similar function.","AT5G42940","CTL06",675.72,0.85766,0.093677,9.1555,{"v":5.41e-20,"d":"5.41E-20"},1.96E-18,"RING/U-box superfamily protein."]
["AT4G24000","CSLG2",77.239,-2.3869,0.27033,-8.8296,1.05E-18,{"v":4.29e-17,"d":"4.29E-17"},"full_name=cellulose synthase like G2. cellulose synthase like G2. encodes a protein similar to cellulose synthase","AT1G47128","RD21A",1537.1,1.0867,0.11511,9.4408,{"v":3.7e-21,"d":"3.70E-21"},{"v":1.47e-19,"d":"1.47E-19"},"full_name=responsive to dehydration 21A. Granulin repeat cysteine protease family protein. cysteine proteinase precursor-like protein/ dehydration stress-responsive gene (RD21). Has been shown to have peptide ligase activity and protease activity in vitro. RD21 is involved in immunity to the necrotrophic fungal pathogen Botrytis cinerea.","AT1G74310","HSP101",5536.6,1.7174,0.17376,9.8835,{"v":4.91e-23,"d":"4.91E-23"},{"v":1.88e-21,"d":"1.88E-21"},"full_name=heat shock protein 101. heat shock protein 101. Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.","AT3G18680","PUMPKIN",338.37,1.6313,0.13466,12.114,{"v":8.89e-34,"d":"8.89E-34"},{"v":3.3e-32,"d":"3.30E-32"},"Amino acid kinase family protein.","AT5G58430","EXO70B1",473.2,0.9865,0.10778,9.1531,{"v":5.53e-20,"d":"5.53E-20"},{"v":2e-18,"d":"2.00E-18"},"full_name=exocyst subunit exo70 family protein B1. exocyst subunit exo70 family protein B1. A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree."]
["AT3G59400","GUN4",124.86,-2.3238,0.2637,-8.8124,{"v":1.22e-18,"d":"1.22E-18"},{"v":5e-17,"d":"5.00E-17"},"full_name=GENOMES UNCOUPLED 4. protein GENOMES UNCOUPLED 4. GUN, genomes uncoupled, is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast. Binds to the magnesium chelatase complex and promotes formation of the substrate,a tetrapyrrole signaling molecule. Porphyrin-binding protein that enhances the activity of Mg-chelatase. Although required for chlorophyll accumulation under normal growth conditions, GUN4 is not essential for chlorophyll synthesis.","AT1G17620",null,463.82,1.1668,0.12385,9.4207,{"v":4.48e-21,"d":"4.48E-21"},1.77E-19,"Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family.","AT5G08460",null,62.136,-3.9729,0.40203,-9.882,{"v":4.98e-23,"d":"4.98E-23"},{"v":1.91e-21,"d":"1.91E-21"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT2G22800","HAT9",111.24,-3.9834,0.329,-12.108,{"v":9.63e-34,"d":"9.63E-34"},{"v":3.57e-32,"d":"3.57E-32"},"Homeobox-leucine zipper protein family. Encodes homeobox protein HAT9.","AT5G14520","PES",1217.6,0.77136,0.084353,9.1444,{"v":5.99e-20,"d":"5.99E-20"},{"v":2.16e-18,"d":"2.16E-18"},"pescadillo-like protein. Encodes a nucleolar protein that plays an essential role in cell growth and survival through its regulation of ribosome biogenesis and mitotic progression."]
["AT4G11600","GPX6",2252,1.0002,0.11363,8.8022,1.34E-18,{"v":5.46e-17,"d":"5.46E-17"},"full_name=glutathione peroxidase 6. glutathione peroxidase 6. Encodes glutathione peroxidase.","AT4G26760","MAP65-2",96.645,-2.3495,0.24965,-9.4109,{"v":4.92e-21,"d":"4.92E-21"},{"v":1.94e-19,"d":"1.94E-19"},"full_name=microtubule-associated protein 65-2. microtubule-associated protein 65-2.","AT5G60760",null,5981.6,1.2693,0.12855,9.8738,{"v":5.41e-23,"d":"5.41E-23"},{"v":2.07e-21,"d":"2.07E-21"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT2G24120","SCA3",321.58,1.7022,0.14103,12.07,1.53E-33,{"v":5.65e-32,"d":"5.65E-32"},"full_name=SCABRA 3. DNA/RNA polymerases superfamily protein.","AT3G59020",null,679.06,0.85711,0.093954,9.1227,{"v":7.33e-20,"d":"7.33E-20"},{"v":2.64e-18,"d":"2.64E-18"},"ARM repeat superfamily protein."]
["AT5G55490","GEX1",65.502,2.6786,0.30442,8.799,1.38E-18,{"v":5.6e-17,"d":"5.60E-17"},"full_name=gamete expressed protein 1. gamete expressed protein 1. Encodes a transmembrane domain containing protein that is expressed in pollen germ cells.","AT1G11670",null,114.47,-2.0569,0.21881,-9.4002,{"v":5.45e-21,"d":"5.45E-21"},2.14E-19,"MATE efflux family protein.","AT5G49820","RUS6",426.15,-1.5229,0.15435,-9.8667,{"v":5.8e-23,"d":"5.80E-23"},{"v":2.21e-21,"d":"2.21E-21"},"full_name=ROOT UV-B SENSITIVE 6. root UVB sensitive protein (Protein of unknown function, DUF647).","AT3G20087","CYP705A17P",111.56,-6.3671,0.52803,-12.058,{"v":1.75e-33,"d":"1.75E-33"},{"v":6.47e-32,"d":"6.47E-32"},"full_name=cytochrome P450, family 705, subfamily A, polypeptide 17 pseudogene. pseudogene. a cytochrome P450 pseudogene","AT4G28300","FLOE1",1540.9,0.74907,0.08214,9.1194,{"v":7.55e-20,"d":"7.55E-20"},{"v":2.71e-18,"d":"2.71E-18"},"formin-like protein (DUF1421). Encodes a protein with 13.6% proline amino acids that is predicted to localize to the cell wall."]
["AT2G23580","MES4",121.46,-1.8418,0.20994,-8.7727,1.74E-18,{"v":7.07e-17,"d":"7.07E-17"},"full_name=methyl esterase 4. methyl esterase 4. Encodes a protein shown to have carboxylesterase activity and methyl salicylate esterase activity in vitro. This protein does not act on methyl IAA, methyl JA, MeGA4, or MEGA9 in vitro.","AT5G09300",null,764.85,-1.0516,0.11201,-9.3883,{"v":6.1e-21,"d":"6.10E-21"},{"v":2.39e-19,"d":"2.39E-19"},"Thiamin diphosphate-binding fold (THDP-binding) superfamily protein.","AT5G52420","PRCE3",2478.1,1.3959,0.14155,9.8611,{"v":6.13e-23,"d":"6.13E-23"},2.33E-21,"transmembrane protein.","AT3G52140","NOXY38",1145.5,1.1332,0.093982,12.058,{"v":1.77e-33,"d":"1.77E-33"},{"v":6.51e-32,"d":"6.51E-32"},"full_name=non responding to oxylipins 38. tetratricopeptide repeat (TPR)-containing protein. Involved in regulating mitochondrial quality control. Regulates mitochondrial association time and thereby is involved in mitochondrial fusion. Mutants show unregulated autophagy and display transcriptomic markers of mitochondrial stress.","AT3G52930","FBA8",105.89,2.2782,0.25001,9.1124,{"v":8.06e-20,"d":"8.06E-20"},2.89E-18,"full_name=fructose-bisphosphate aldolase 8. Aldolase superfamily protein."]
["AT3G56130","BLP3",911.65,-0.92758,0.10574,-8.7723,{"v":1.75e-18,"d":"1.75E-18"},{"v":7.07e-17,"d":"7.07E-17"},"biotin/lipoyl attachment domain-containing protein.","AT4G28050","TET7",165,-1.8275,0.19471,-9.3855,{"v":6.26e-21,"d":"6.26E-21"},2.45E-19,"full_name=tetraspanin7. tetraspanin7. Member of TETRASPANIN family","AT5G43770",null,1317.7,1.6024,0.1626,9.855,{"v":6.52e-23,"d":"6.52E-23"},{"v":2.48e-21,"d":"2.48E-21"},"proline-rich family protein.","AT1G79690","NUDT3",641.94,-1.8231,0.15139,-12.042,{"v":2.13e-33,"d":"2.13E-33"},{"v":7.8e-32,"d":"7.80E-32"},"full_name=nudix hydrolase homolog 3. nudix hydrolase homolog 3.","AT4G35770","SEN1",229.1,1.5208,0.16714,9.0992,{"v":9.1E-20,"d":"9.10E-20"},3.25E-18,"full_name=SENESCENCE 1. Rhodanese/Cell cycle control phosphatase superfamily protein. Senescence-associated gene that is strongly induced by phosphate starvation. Transcripts are differentially regulated at the level of mRNA stability at different times of day. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant."]
["AT1G76610",null,193.6,-1.4857,0.16989,-8.7451,{"v":2.23e-18,"d":"2.23E-18"},{"v":8.99e-17,"d":"8.99E-17"},"MIZU-KUSSEI-like protein (Protein of unknown function, DUF617).","AT2G41280","M10",71.983,3.1403,0.33468,9.383,{"v":6.41e-21,"d":"6.41E-21"},{"v":2.5e-19,"d":"2.50E-19"},"late embryogenesis abundant protein (M10) / LEA protein M10. Encodes a hydrophilic protein similar to Late Embryogenesis Activated (LEA) proteins expressed during embryogenesis, which are thought to be involved in the acquisition of dessication tolerance.","AT3G44460","DPBF2",1293.1,-1.5748,0.16,-9.8424,{"v":7.39e-23,"d":"7.39E-23"},{"v":2.8E-21,"d":"2.80E-21"},"Basic-leucine zipper (bZIP) transcription factor family protein. basic leucine zipper transcription factor (BZIP67), identical to basic leucine zipper transcription factor GI:18656053 from (Arabidopsis thaliana); identical to cDNA basic leucine zipper transcription factor (atbzip67 gene) GI:18656052. Located in the nucleus and expressed during seed maturation in the cotyledons.","AT3G61440","CYSC1",117.99,-3.0161,0.25081,-12.025,{"v":2.62e-33,"d":"2.62E-33"},{"v":9.6e-32,"d":"9.60E-32"},"full_name=cysteine synthase C1. cysteine synthase C1. Encodes a cysteine synthase isomer CysC1. The isomer is however less effective in cysteine biosynthesis. It is involved in beta-cyanoalanine biosynthesis, an intermediate of cyanide detoxification pathway.","AT3G54500","LNK2",616.29,-0.92009,0.10112,-9.0989,{"v":9.13e-20,"d":"9.13E-20"},3.26E-18,"agglutinin-like protein."]
["AT5G53270",null,98.829,2.6705,0.30559,8.7388,{"v":2.36e-18,"d":"2.36E-18"},{"v":9.48e-17,"d":"9.48E-17"},"Seed maturation protein.","AT2G04040","DTX1",70.273,2.6917,0.28692,9.3813,{"v":6.51e-21,"d":"6.51E-21"},{"v":2.54e-19,"d":"2.54E-19"},"full_name=detoxification 1. MATE efflux family protein. AtDTX1 (At2g04040) has been identified as a detoxifying efflux carrier for plant-derived antibiotics and other toxic compounds, including CD2+. Mistakenly referred to as At2g04070 in PMID:11739388.","AT4G13345","MEE55",253.67,-1.8777,0.1908,-9.8413,{"v":7.47e-23,"d":"7.47E-23"},{"v":2.82e-21,"d":"2.82E-21"},"full_name=maternal effect embryo arrest 55. Serinc-domain containing serine and sphingolipid biosynthesis protein.","AT2G29550","TUB7",195.76,-2.4514,0.20402,-12.015,{"v":2.96e-33,"d":"2.96E-33"},{"v":1.08e-31,"d":"1.08E-31"},"full_name=tubulin beta-7 chain. tubulin beta-7 chain. Encodes a beta-tubulin that is expressed in leaves, roots and flowers.","AT3G20670","HTA13",138.27,1.8825,0.20722,9.0848,1.04E-19,{"v":3.7e-18,"d":"3.70E-18"},"full_name=histone H2A 13. histone H2A 13. Encodes HTA13, a histone H2A protein."]
["AT2G25890",null,1159.6,0.95889,0.10974,8.7375,2.38E-18,{"v":9.57e-17,"d":"9.57E-17"},"Oleosin family protein.","AT3G25830","TPS-CIN",393.28,1.5169,0.16179,9.376,{"v":6.85e-21,"d":"6.85E-21"},2.67E-19,"full_name=terpene synthase-like sequence-1,8-cineole. terpene synthase-like sequence-1,8-cineole. Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830.","AT4G01985",null,57.05,4.615,0.46907,9.8386,{"v":7.68e-23,"d":"7.68E-23"},{"v":2.9E-21,"d":"2.90E-21"},"hypothetical protein.","AT5G63030","GRXC1",8567,0.8796,0.073299,12,{"v":3.54e-33,"d":"3.54E-33"},{"v":1.29e-31,"d":"1.29E-31"},"full_name=glutaredoxin C1. Thioredoxin superfamily protein.","AT3G44100",null,695.03,-1.1769,0.12968,-9.0758,1.13E-19,{"v":4.01e-18,"d":"4.01E-18"},"MD-2-related lipid recognition domain-containing protein."]
["AT3G10450","SCPL7",186.45,2.1694,0.24835,8.7351,{"v":2.44e-18,"d":"2.44E-18"},{"v":9.74e-17,"d":"9.74E-17"},"full_name=serine carboxypeptidase-like 7. serine carboxypeptidase-like 7.","AT5G64190",null,1389.8,0.89876,0.095908,9.3711,7.18E-21,{"v":2.79e-19,"d":"2.79E-19"},"neuronal PAS domain protein.","AT5G33320","CUE1",264.62,-1.6907,0.1719,-9.8353,7.93E-23,2.99E-21,"full_name=CAB UNDEREXPRESSED 1. Glucose-6-phosphate/phosphate translocator-like protein. Encodes a plastid inner envelope protein PPT (phosphoenolpyruvate/phosphate translocator) that catalyzes the transport of phosphoenolpyruvate and phosphate across the inner envelope membrane of plastids.","AT1G62990","KNAT7",105.18,-4.5903,0.38287,-11.989,{"v":4.06e-33,"d":"4.06E-33"},1.48E-31,"full_name=KNOTTED-like homeobox of Arabidopsis thaliana 7. homeobox knotted-like protein. Encodes a homeodomain transcription factor of the Knotted family. May be involved in secondary cell wall biosynthesis. Mutants have moderately irregular xylem development. Expression of this gene is upregulated by SND1 and MYB46.","AT1G01720","ATAF1",10447,0.62185,0.068535,9.0734,{"v":1.15e-19,"d":"1.15E-19"},{"v":4.09e-18,"d":"4.09E-18"},"NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA."]
["AT1G21140","VTL1",78.242,-2.5898,0.29649,-8.735,{"v":2.44e-18,"d":"2.44E-18"},{"v":9.74e-17,"d":"9.74E-17"},"Vacuolar iron transporter (VIT) family protein. The gene encodes nodulin-like1 whose transcript abundance was repressed under conditions of Fe-deficient growth.","AT2G26440","PME12",66.709,-3.1936,0.341,-9.3654,{"v":7.58e-21,"d":"7.58E-21"},2.93E-19,"Plant invertase/pectin methylesterase inhibitor superfamily.","AT1G60680",null,883.19,1.5229,0.1549,9.8312,{"v":8.27e-23,"d":"8.27E-23"},{"v":3.1e-21,"d":"3.10E-21"},"NAD(P)-linked oxidoreductase superfamily protein.","AT1G76160","sks5",96.899,-4.7251,0.39444,-11.979,{"v":4.56e-33,"d":"4.56E-33"},1.66E-31,"full_name=SKU5 similar 5. SKU5 similar 5.","AT3G19760","EIF4A-III",1196.5,0.77138,0.085049,9.0698,1.19E-19,{"v":4.22e-18,"d":"4.22E-18"},"full_name=eukaryotic initiation factor 4A-III. eukaryotic initiation factor 4A-III. Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles."]
["AT5G13320","PBS3",52.508,-3.4288,0.3939,-8.7049,3.18E-18,{"v":1.27e-16,"d":"1.27E-16"},"full_name=AVRPPHB SUSCEPTIBLE 3. Auxin-responsive GH3 family protein. Encodes an enzyme capable of conjugating amino acids to 4-substituted benzoates. 4-HBA (4-hydroxybenzoic acid) and pABA (4-aminobenzoate) may be targets of the enzyme in Arabidopsis, leading to the production of pABA-Glu, 4HBA-Glu, or other related compounds. This enzyme is involved in disease-resistance signaling. It is required for the accumulation of salicylic acid, activation of defense responses, and resistance to Pseudomonas syringae. Salicylic acid can decrease this enzyme's activity in vitro and may act as a competitive inhibitor. Expression of PBS3/GH3.12 can be detected in cotyledons, true leaves, hypocotyls, and occasionally in some parts of roots from 10-day-old seedlings. No expression has been detected in root, stem, rosette or cauline leaves of mature 4- to 5-week-old plants.","AT4G19170","NCED4",293.78,1.4048,0.15007,9.3605,{"v":7.93e-21,"d":"7.93E-21"},{"v":3.07e-19,"d":"3.07E-19"},"full_name=nine-cis-epoxycarotenoid dioxygenase 4. nine-cis-epoxycarotenoid dioxygenase 4. chloroplast-targeted member of a family of enzymes similar to nine-cis-epoxycarotenoid dioxygenase","AT2G20920",null,435.94,1.2281,0.12493,9.8303,8.34E-23,3.12E-21,"chaperone (DUF3353).","AT1G09500",null,455.18,-1.4734,0.1232,-11.959,{"v":5.79e-33,"d":"5.79E-33"},{"v":2.1e-31,"d":"2.10E-31"},"NAD(P)-binding Rossmann-fold superfamily protein. similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase","AT5G01520","AIRP2",1259.6,-1.1076,0.12223,-9.061,1.29E-19,{"v":4.56e-18,"d":"4.56E-18"},"full_name=ABA Insensitive RING Protein 2. RING/U-box superfamily protein."]
["AT1G05150",null,870.52,0.98377,0.11316,8.6935,{"v":3.52e-18,"d":"3.52E-18"},{"v":1.4e-16,"d":"1.40E-16"},"Calcium-binding tetratricopeptide family protein.","AT1G22710","SUC2",3028.6,-0.84348,0.090202,-9.3511,{"v":8.68e-21,"d":"8.68E-21"},3.35E-19,"full_name=sucrose-proton symporter 2. sucrose-proton symporter 2. Encodes for a high-affinity transporter essential for phloem loading and long-distance transport. A major sucrose transporter, AtSUC2 can also transport a wide range of physiological and synthetic glucose conjugates with both &#945;- or &#946;-linkage.","AT1G04580","AO4",988.57,-1.2859,0.13089,-9.825,{"v":8.79e-23,"d":"8.79E-23"},{"v":3.29e-21,"d":"3.29E-21"},"full_name=aldehyde oxidase 4. aldehyde oxidase 4. Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.","AT3G52920",null,169.61,-2.5835,0.21614,-11.953,{"v":6.25e-33,"d":"6.25E-33"},2.26E-31,"transcriptional activator (DUF662).","AT2G38340","DREB19",462.5,-1.304,0.14398,-9.0567,{"v":1.34e-19,"d":"1.34E-19"},{"v":4.73e-18,"d":"4.73E-18"},"full_name=dehydration response element-binding protein 19. Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought."]
["AT3G02410","ICME-LIKE2",133.22,1.7906,0.20599,8.6929,{"v":3.53e-18,"d":"3.53E-18"},{"v":1.4e-16,"d":"1.40E-16"},"full_name=Isoprenylcysteine methylesterase-like 2. alpha/beta-Hydrolases superfamily protein.","AT2G32640","LCYB",93.643,-2.3436,0.25063,-9.3508,{"v":8.7e-21,"d":"8.70E-21"},3.35E-19,"Lycopene beta/epsilon cyclase protein.","AT2G36880","MAT3",429.18,-1.455,0.14813,-9.8227,8.99E-23,{"v":3.35e-21,"d":"3.35E-21"},"full_name=methionine adenosyltransferase 3. methionine adenosyltransferase 3.","AT1G43640","TLP5",81.125,-4.5804,0.38349,-11.944,{"v":6.99e-33,"d":"6.99E-33"},{"v":2.52e-31,"d":"2.52E-31"},"full_name=tubby like protein 5. tubby like protein 5. Member of TLP family","AT2G47770","TSPO",10190,-0.66872,0.07384,-9.0564,1.35E-19,{"v":4.74e-18,"d":"4.74E-18"},"full_name=TSPO(outer membrane tryptophan-rich sensory protein)-related. TSPO(outer membrane tryptophan-rich sensory protein)-like protein. Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks. It is degraded through the autophagy pathway."]
["AT3G25820","TPS-CIN",118.31,10.398,1.1962,8.6925,{"v":3.55e-18,"d":"3.55E-18"},1.41E-16,"full_name=terpene synthase-like sequence-1,8-cineole. terpene synthase-like sequence-1,8-cineole. Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830.","AT2G38040","CAC3",1845.1,-0.8589,0.091866,-9.3494,{"v":8.81e-21,"d":"8.81E-21"},3.38E-19,"full_name=acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit. acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit. encodes the carboxyltransferase alpha subunit of acetyl-CoA carboxylase, involved in de novo fatty acid biosynthesis","AT5G28840","GME",940.15,-1.064,0.10835,-9.8195,{"v":9.28e-23,"d":"9.28E-23"},{"v":3.45e-21,"d":"3.45E-21"},"full_name=GDP-D-mannose 3',5'-epimerase. GDP-D-mannose 3',5'-epimerase. Encodes a protein with GDP-D-mannose 3',5'-epimerase activity. The enzyme is involved in ascorbate biosynthesis. It catalyzes the conversion of GDP-D-mannose to GDP-L-galactose.","AT1G26820","RNS3",174.51,-3.7911,0.31793,-11.924,{"v":8.84e-33,"d":"8.84E-33"},{"v":3.18e-31,"d":"3.18E-31"},"full_name=ribonuclease 3. ribonuclease 3. Encodes ribonuclease RNS3.","AT5G66090",null,435.27,-0.99277,0.10982,-9.0398,{"v":1.57e-19,"d":"1.57E-19"},5.51E-18,"cell wall integrity/stress response component."]
["AT5G62680","GTR2",500.47,1.0998,0.12655,8.6904,{"v":3.61e-18,"d":"3.61E-18"},{"v":1.43e-16,"d":"1.43E-16"},"full_name=GLUCOSINOLATE TRANSPORTER-2. Major facilitator superfamily protein. Encodes a high-affinity, proton-dependent glucosinolate-specific transporter that is crucial for the transport of both methionine- and tryptophan-derived glucosinolates to seeds.","AT1G07430","HAI2",290.02,1.4089,0.15078,9.344,{"v":9.28e-21,"d":"9.28E-21"},{"v":3.55e-19,"d":"3.55E-19"},"full_name=highly ABA-induced PP2C gene 2. highly ABA-induced PP2C protein 2. Encodes a member of the group A protein phosphatase 2C (PP2C) family that is responsible for negatively regulating seed dormancy.","AT4G09760","CEK3",416.13,-1.5134,0.1542,-9.8142,{"v":9.78e-23,"d":"9.78E-23"},{"v":3.63e-21,"d":"3.63E-21"},"Protein kinase superfamily protein. encodes a choline synthase whose gene expression is induced by high salt and mannitol.","AT5G18270","ANAC087",86.922,-4.27,0.35823,-11.92,{"v":9.34e-33,"d":"9.34E-33"},3.35E-31,"full_name=Arabidopsis NAC domain containing protein 87. NAC domain containing protein 87.","AT4G16780","HB-2",100.98,2.1925,0.24266,9.0355,{"v":1.63e-19,"d":"1.63E-19"},{"v":5.71e-18,"d":"5.71E-18"},"full_name=homeobox protein 2. homeobox protein 2. Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin."]
["AT1G56100",null,45.943,-3.8656,0.44534,-8.6801,{"v":3.96e-18,"d":"3.96E-18"},1.56E-16,"Plant invertase/pectin methylesterase inhibitor superfamily protein.","AT1G73010","PS2",431.25,1.8588,0.1991,9.3363,{"v":9.98e-21,"d":"9.98E-21"},{"v":3.81e-19,"d":"3.81E-19"},"full_name=phosphate starvation-induced gene 2. inorganic pyrophosphatase 1. Encodes PPsPase1, a pyrophosphate-specific phosphatase catalyzing the specific cleavage of pyrophosphate (Km 38.8 uM) with an alkaline catalytic pH optimum. Expression is upregulated in the shoot of cax1/cax3 mutant.","AT1G74300",null,107.52,-2.2851,0.23286,-9.8132,{"v":9.88e-23,"d":"9.88E-23"},{"v":3.66e-21,"d":"3.66E-21"},"alpha/beta-Hydrolases superfamily protein.","AT4G25040","CASPL1F1",174.18,-3.6556,0.30678,-11.916,{"v":9.76e-33,"d":"9.76E-33"},{"v":3.5e-31,"d":"3.50E-31"},"Uncharacterized protein family (UPF0497).","AT2G26190","IQM4",182.89,1.5968,0.17676,9.0338,1.66E-19,5.79E-18,"calmodulin-binding family protein."]
["AT3G58550","LTPG22",84.912,7.4752,0.86161,8.6758,{"v":4.11e-18,"d":"4.11E-18"},{"v":1.62e-16,"d":"1.62E-16"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT3G21730","FOLB3",1537.4,1.3505,0.1447,9.3335,1.02E-20,{"v":3.9E-19,"d":"3.90E-19"},"Dihydroneopterin aldolase.","AT2G29630","THIC",94.374,-2.7689,0.28291,-9.7873,{"v":1.28e-22,"d":"1.28E-22"},{"v":4.72e-21,"d":"4.72E-21"},"full_name=thiaminC. thiaminC. Encodes a protein involved in thiamine biosynthesis. The protein is an iron-sulfur cluster protein predicted to catalyze the conversion of 5-aminoimidazole ribonucleotide (AIR) to hydroxymethylpyrimidine phosphate (HMP-P). A severe reduction of THIC levels in plants decreases vitamin B1 (thiamin diphosphate (TPP)) levels and also leads to changes in the levels of numerous other metabolites since so many primary metabolic enzymes require a TPP co-factor. thiC mutants are chlorotic and arrest in their development at the cotyledon stage. A N-terminal targeting sequence directs the THIC protein to the chloroplast stroma. The THIC transcript is regulated by a TPP riboswitch in the 3' UTR. THIC transcripts are observed in seedlings 5 or more days after germination, and light promotes the expression of this gene.","AT4G11310","CP1",42396,0.90346,0.075843,11.912,1.02E-32,{"v":3.65e-31,"d":"3.65E-31"},"Papain family cysteine protease. cysteine proteinase precursor-like protein","AT4G36220","FAH1",302.13,-1.3096,0.14508,-9.0271,{"v":1.76e-19,"d":"1.76E-19"},{"v":6.14e-18,"d":"6.14E-18"},"full_name=ferulic acid 5-hydroxylase 1. ferulic acid 5-hydroxylase 1. encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis."]
["AT5G16390","CAC1",659.31,-1.163,0.13421,-8.6655,{"v":4.5e-18,"d":"4.50E-18"},{"v":1.77e-16,"d":"1.77E-16"},"full_name=chloroplastic acetylcoenzyme A carboxylase 1. chloroplastic acetylcoenzyme A carboxylase 1. Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex.","AT5G49460","ACLB-2",350.31,-1.3334,0.14297,-9.3265,{"v":1.09e-20,"d":"1.09E-20"},{"v":4.17e-19,"d":"4.17E-19"},"full_name=ATP citrate lyase subunit B 2. ATP citrate lyase subunit B 2. One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL)","AT1G43160","RAP2.6",61.534,5.0843,0.51951,9.7867,{"v":1.28e-22,"d":"1.28E-22"},{"v":4.74e-21,"d":"4.74E-21"},"full_name=related to AP2 6. related to AP2 6. encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family (RAP2.6). The protein contains one AP2 domain. There are 7 members in this subfamily.","AT2G02160","ATC3H17",398.79,1.7458,0.14658,11.91,1.05E-32,{"v":3.76e-31,"d":"3.76E-31"},"CCCH-type zinc finger family protein.","AT5G50850","MAB1",694.67,0.98558,0.10952,8.9993,{"v":2.27e-19,"d":"2.27E-19"},{"v":7.89e-18,"d":"7.89E-18"},"full_name=MACCI-BOU. Transketolase family protein."]
["AT1G19540",null,129.23,2.8383,0.32761,8.6637,{"v":4.57e-18,"d":"4.57E-18"},1.79E-16,"NmrA-like negative transcriptional regulator family protein.","AT1G10070","BCAT-2",363.04,1.3582,0.14564,9.3261,{"v":1.1E-20,"d":"1.10E-20"},{"v":4.17e-19,"d":"4.17E-19"},"full_name=branched-chain amino acid transaminase 2. branched-chain amino acid transaminase 2. Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant. Involved in cell wall development.","AT1G69890","DUF569",130.05,2.1491,0.21976,9.7793,{"v":1.38e-22,"d":"1.38E-22"},{"v":5.09e-21,"d":"5.09E-21"},"actin cross-linking protein (DUF569).","AT2G43060","IBH1",107.02,-5.5498,0.46612,-11.906,{"v":1.1E-32,"d":"1.10E-32"},{"v":3.9e-31,"d":"3.90E-31"},"full_name=ILI1 binding bHLH 1. ILI1 binding bHLH 1.","AT2G02850","ARPN",1514.3,-0.82648,0.091956,-8.9878,{"v":2.52e-19,"d":"2.52E-19"},{"v":8.75e-18,"d":"8.75E-18"},"full_name=plantacyanin. plantacyanin. Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil."]
["AT2G41400",null,1207.2,1.5164,0.17505,8.6625,{"v":4.62e-18,"d":"4.62E-18"},{"v":1.81e-16,"d":"1.81E-16"},"Pollen Ole e 1 allergen and extensin family protein.","AT5G47670","NF-YB6",117.89,-1.992,0.21367,-9.3229,1.13E-20,{"v":4.29e-19,"d":"4.29E-19"},"full_name=nuclear factor Y, subunit B6. nuclear factor Y, subunit B6. Encodes LEC1-Like (L1L), closely related to LEC1 (Leafy Cotyledon1). Functions as a regulator of embryo development.","AT4G18220",null,57.098,3.692,0.37805,9.7658,{"v":1.58e-22,"d":"1.58E-22"},{"v":5.8E-21,"d":"5.80E-21"},"Drug/metabolite transporter superfamily protein.","AT1G64390","GH9C2",130.17,-3.3478,0.2812,-11.906,1.11E-32,{"v":3.93e-31,"d":"3.93E-31"},"full_name=glycosyl hydrolase 9C2. glycosyl hydrolase 9C2.","AT5G19590",null,641.06,-0.85368,0.094993,-8.9867,{"v":2.55e-19,"d":"2.55E-19"},{"v":8.81e-18,"d":"8.81E-18"},"DUF538 family protein (Protein of unknown function, DUF538)."]
["AT1G65930","cICDH",3477.6,-0.7435,0.085922,-8.6532,{"v":5.01e-18,"d":"5.01E-18"},{"v":1.95e-16,"d":"1.95E-16"},"full_name=cytosolic NADP+-dependent isocitrate dehydrogenase. cytosolic NADP+-dependent isocitrate dehydrogenase. Encodes a NADP+-isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses.","AT3G08590","iPGAM2",723.93,-1.1,0.11818,-9.3073,1.31E-20,4.96E-19,"full_name=2,3-biphosphoglycerate-independent phosphoglycerate mutase 2. Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent. Encodes a 2,3-biphosphoglycerate-independent phosphoglycerate mutase that is involved in pollen development and stomatal movement.","AT1G13740","AFP2",641.4,1.1537,0.11832,9.751,{"v":1.83e-22,"d":"1.83E-22"},{"v":6.69e-21,"d":"6.69E-21"},"full_name=ABI five binding protein 2. ABI five binding protein 2. Encodes a member of a small plant-specific gene family whose members interact with ABI5 and appear to be involved in mediating stress responses. AFP2 mutants affect a number of ABA mediated processes such as germination and response to osmotic and sugar stress. AFP2 nuclear localization is stress dependent.","AT1G43670","FBP",524.85,1.4889,0.12512,11.9,1.18E-32,{"v":4.18e-31,"d":"4.18E-31"},"full_name=fructose-1,6-bisphosphatase. Inositol monophosphatase family protein. Encodes a fructose-1,6-bisphosphatase. This enzyme, in addition to catalyzing the formation of fructose-6-phosphate for sucrose biosynthesis, appears to play a role in fructose-mediated signaling that is independent of its enzymatic activity. atcfbp-1/fins1 mutants have reduced photosynthetic rates, elevated levels of starch and reduced levels of sucrose during the day. Although the protein is expected to be cytosolic, a GFP-tagged version localizes to the cytoplasm and the nucleus.","AT2G28720",null,679.97,-1.2269,0.13663,-8.9794,{"v":2.72e-19,"d":"2.72E-19"},{"v":9.4e-18,"d":"9.40E-18"},"Histone superfamily protein."]
["AT3G52910","GRF4",207.56,-1.4779,0.1709,-8.6482,{"v":5.23e-18,"d":"5.23E-18"},{"v":2.04e-16,"d":"2.04E-16"},"full_name=growth-regulating factor 4. growth-regulating factor 4. Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.","AT3G21090","ABCG15",751.55,-0.97063,0.10438,-9.2993,{"v":1.41e-20,"d":"1.41E-20"},{"v":5.33e-19,"d":"5.33E-19"},"full_name=ATP-binding cassette G15. ABC-2 type transporter family protein.","AT2G20190","CLASP",186.47,-1.8868,0.1935,-9.7507,{"v":1.83e-22,"d":"1.83E-22"},{"v":6.7e-21,"d":"6.70E-21"},"full_name=CLIP-associated protein. CLIP-associated protein. Encodes a microtubule-associated protein that is involved in both cell division and cell expansion. It likely promotes microtubule stability.","AT3G04280","RR22",130.4,-6.769,0.56905,-11.895,{"v":1.25e-32,"d":"1.25E-32"},{"v":4.42e-31,"d":"4.42E-31"},"full_name=response regulator 22. response regulator 22. Encodes an atypical subtype of the ARR (Arabidopsis response regulator) protein family. ARR22 is more similar to the receiver domains of hybrid kinases than other response regulators. It acts as a phosphohistidine phosphatase when tested with phospho-AHP5 in vitro suggesting that it might be involved in a two-component phosphorelay. Expression of ARR22 transcripts appears to be localized to the chalaza and to be induced by wounding. Ectopic expression of ARR in other parts of the plant leads to reduced cytokinin-related responses and impaired root, shoot, and flower development. Overexpression of wild-type ARR22 in an arr22 mutant background causes variable defects in plant growth and fertility. But, in the same ar22 background, over-expression of versions of ARR22 that should act as dominant-negative or constitutively active proteins, based on mutations to the conserved Asp residue, do not show any phenotypic abnormalities, raising the possibility that these may not act as canonical response regulators.","AT5G17380",null,1736.8,0.75504,0.084146,8.973,{"v":2.89e-19,"d":"2.89E-19"},{"v":9.94e-18,"d":"9.94E-18"},"Thiamine pyrophosphate dependent pyruvate decarboxylase family protein."]
["AT1G23000","ATHMP05",691.15,-1.386,0.16053,-8.6339,5.93E-18,{"v":2.31e-16,"d":"2.31E-16"},"Heavy metal transport/detoxification superfamily protein.","AT5G01075","TWS1",221.88,-1.5008,0.16146,-9.295,{"v":1.47e-20,"d":"1.47E-20"},5.54E-19,"Glycosyl hydrolase family 35 protein.","AT2G42600","PPC2",1336.2,-1.4646,0.15029,-9.7454,{"v":1.93e-22,"d":"1.93E-22"},{"v":7.04e-21,"d":"7.04E-21"},"full_name=phosphoenolpyruvate carboxylase 2. phosphoenolpyruvate carboxylase 2. Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.","AT4G19960","KUP9",275.84,2.2766,0.1914,11.894,{"v":1.27e-32,"d":"1.27E-32"},{"v":4.48e-31,"d":"4.48E-31"},"full_name=K+ uptake permease 9. K+ uptake permease 9. Encodes a potassium ion transmembrane transporter. Also mediates cesium uptake when expressed in E. coli.","AT1G11190","BFN1",64.979,-5.7692,0.64316,-8.9702,2.96E-19,1.02E-17,"full_name=bifunctional nuclease i. bifunctional nuclease i. Encodes a bifunctional nuclease that acts on both RNA and DNA involved in nucleic acid degradation to facilitate nucleotide and phosphate recovery during senescence. It has mismatch-specific endonuclease activity with wide recognition of single base mismatches as well as the ability to cleave indel types of mismatches (heteroduplexes with loops)."]
["AT1G25440","BBX15",58.067,-2.9397,0.34064,-8.6299,{"v":6.14e-18,"d":"6.14E-18"},{"v":2.38e-16,"d":"2.38E-16"},"full_name=B-box domain protein 15. B-box type zinc finger protein with CCT domain-containing protein.","AT3G13510",null,910.86,-1.0269,0.11051,-9.2925,{"v":1.51e-20,"d":"1.51E-20"},{"v":5.66e-19,"d":"5.66E-19"},"carboxyl-terminal peptidase, putative (DUF239).","AT5G38530","TSBtype2",1303.6,1.2786,0.1312,9.7453,{"v":1.93e-22,"d":"1.93E-22"},{"v":7.04e-21,"d":"7.04E-21"},"full_name=tryptophan synthase beta type 2. tryptophan synthase beta type 2. TSBtype2 encodes a type 2 tryptophan synthase beta subunit that catalyzes a condensation reaction between serine and indole to generate tryptophan.It appears to form a homodimer. Its biological role has not yet been determined, but it has a very high affinity for indole which may be involved in allowing TSBtype2 to carefully limit free indole build-up. But, to date no overall change in plant morphology or seedling root growth have been observed in tsbtype2 mutants, indicating that this gene is not essential under optimum conditions. n most organs, TSBtype2 is transcripts are expressed at a lower level than TSB1 but in dry seeds they are expressed at comparable levels.","AT5G67300","MYBR1",755.3,-1.2631,0.10621,-11.893,1.29E-32,{"v":4.54e-31,"d":"4.54E-31"},"full_name=myb domain protein r1. myb domain protein r1. Member of the R2R3 factor MYB gene family involved in mediating plant responses to a variety of abiotic stimiuli.","AT1G02850","BGLU11",3302.2,-0.58913,0.065712,-8.9652,{"v":3.1e-19,"d":"3.10E-19"},{"v":1.06e-17,"d":"1.06E-17"},"full_name=beta glucosidase 11. beta glucosidase 11."]
["AT4G38810","SCS",1634.3,0.83728,0.097073,8.6253,{"v":6.39e-18,"d":"6.39E-18"},{"v":2.47e-16,"d":"2.47E-16"},"Calcium-binding EF-hand family protein.","AT5G18130",null,216.34,1.4693,0.15857,9.266,1.93E-20,{"v":7.25e-19,"d":"7.25E-19"},"transmembrane protein.","AT5G16970","AER",1226.9,1.1482,0.11792,9.7369,{"v":2.1e-22,"d":"2.10E-22"},{"v":7.62e-21,"d":"7.62E-21"},"full_name=alkenal reductase. alkenal reductase. encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls","AT3G46920",null,532.75,-1.3187,0.11101,-11.879,{"v":1.53e-32,"d":"1.53E-32"},5.36E-31,"kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein.","AT1G72040","dNK",2184,-0.58411,0.065238,-8.9535,{"v":3.44e-19,"d":"3.44E-19"},1.18E-17,"full_name=deoxyribonucleoside kinase. P-loop containing nucleoside triphosphate hydrolases superfamily protein. Encodes a multisubstrate deoxyribonucleoside kinase that salvages DNA precursors."]
["AT1G22350",null,49.168,3.3328,0.38662,8.6204,{"v":6.67e-18,"d":"6.67E-18"},2.58E-16,"pseudogene.","AT5G20940",null,1113.8,1.0182,0.1099,9.2642,{"v":1.97e-20,"d":"1.97E-20"},{"v":7.35e-19,"d":"7.35E-19"},"Glycosyl hydrolase family protein.","AT1G42960",null,392.11,-1.3435,0.13807,-9.7306,{"v":2.23e-22,"d":"2.23E-22"},{"v":8.09e-21,"d":"8.09E-21"},"inner membrane localized protein. expressed protein localized to the inner membrane of the chloroplast.","AT1G54050","HSP17.4B",1530.4,1.1747,0.098909,11.877,{"v":1.56e-32,"d":"1.56E-32"},{"v":5.47e-31,"d":"5.47E-31"},"HSP20-like chaperones superfamily protein.","AT5G11680",null,1173.3,-0.74629,0.083506,-8.937,{"v":4e-19,"d":"4.00E-19"},1.37E-17,"classical AGP protein."]
["AT4G15620","CASPL1E2",326.25,-1.2495,0.14514,-8.609,{"v":7.37e-18,"d":"7.37E-18"},{"v":2.84e-16,"d":"2.84E-16"},"Uncharacterized protein family (UPF0497).","AT4G16442","CASPL2B1",319.16,-1.2979,0.14013,-9.2618,{"v":2.01e-20,"d":"2.01E-20"},{"v":7.5e-19,"d":"7.50E-19"},"Uncharacterized protein family (UPF0497).","AT1G26800","MPSR1",62.478,3.1696,0.32586,9.7269,{"v":2.32e-22,"d":"2.32E-22"},{"v":8.38e-21,"d":"8.38E-21"},"RING/U-box superfamily protein.","AT4G25030","ATNHR2B",155.52,-2.3569,0.19845,-11.877,1.57E-32,{"v":5.47e-31,"d":"5.47E-31"},"Serine/Threonine-kinase.","AT5G65530","ATRLCK VI_A3",733.1,0.8914,0.099791,8.9326,{"v":4.16e-19,"d":"4.16E-19"},{"v":1.42e-17,"d":"1.42E-17"},"Protein kinase superfamily protein. Encodes a protein kinase involved in mediating resistance to fungi and also trichome branch number. Kinase activity is increased by ROP6 which also affects its sub-cellular localization (becomes localized to the cell periphery_"]
["AT5G44310",null,4060.5,0.86777,0.10082,8.6074,{"v":7.47e-18,"d":"7.47E-18"},{"v":2.87e-16,"d":"2.87E-16"},"Late embryogenesis abundant protein (LEA) family protein.","AT1G10200","WLIM1",130.84,-1.9604,0.21168,-9.2611,2.02E-20,{"v":7.53e-19,"d":"7.53E-19"},"full_name=WLIM1. GATA type zinc finger transcription factor family protein. Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization.","AT2G43820","UGT74F2",118.48,2.3356,0.24015,9.7258,2.34E-22,{"v":8.45e-21,"d":"8.45E-21"},"full_name=UDP-glucosyltransferase 74F2. UDP-glucosyltransferase 74F2. Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.","AT2G19110","HMA4",99.902,-4.4269,0.37274,-11.877,1.57E-32,{"v":5.47e-31,"d":"5.47E-31"},"full_name=heavy metal atpase 4. heavy metal atpase 4. Encodes a protein with similarity to Zn ATPase. Can rescue Zn deficiency in yeast and Cd resistance, suggesting a role in Zn and Cd transport.","AT5G55240","ATPXG2",12389,-0.59833,0.066987,-8.9321,{"v":4.18e-19,"d":"4.18E-19"},{"v":1.42e-17,"d":"1.42E-17"},"full_name=ARABIDOPSIS THALIANA PEROXYGENASE 2. PEROXYGENASE 2. Catalyze hydroperoxide-dependent mono-oxygenation reactions. Require calcium for peroxygenase activity. Probably deeply buried in lipid droplets or microsomes."]
["AT2G27570",null,53.757,6.0705,0.70547,8.605,{"v":7.63e-18,"d":"7.63E-18"},{"v":2.93e-16,"d":"2.93E-16"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT5G27360","SFP2",1041.9,-0.87885,0.094976,-9.2533,{"v":2.18e-20,"d":"2.18E-20"},{"v":8.09e-19,"d":"8.09E-19"},"Major facilitator superfamily protein. Encodes a sugar-porter family protein that unlike the closely related gene, SFP1, is not induced during leaf senescence.","AT1G19900","RUBY",8872.1,-1.9158,0.197,-9.7245,2.37E-22,{"v":8.54e-21,"d":"8.54E-21"},"glyoxal oxidase-related protein.","AT2G27360",null,163.46,-3.174,0.26731,-11.874,{"v":1.61e-32,"d":"1.61E-32"},5.61E-31,"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT5G37260","RVE2",567.16,1.3962,0.15644,8.925,{"v":4.46e-19,"d":"4.46E-19"},{"v":1.51e-17,"d":"1.51E-17"},"full_name=REVEILLE 2. Homeodomain-like superfamily protein. Encodes a MYB family transcription factor Circadian 1 (CIR1). Involved in circadian regulation in Arabidopsis."]
["AT3G25830","TPS-CIN",110.31,10.296,1.1968,8.6035,{"v":7.73e-18,"d":"7.73E-18"},{"v":2.96e-16,"d":"2.96E-16"},"full_name=terpene synthase-like sequence-1,8-cineole. terpene synthase-like sequence-1,8-cineole. Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830.","AT2G19930",null,617.82,1.0895,0.11782,9.2475,{"v":2.3e-20,"d":"2.30E-20"},{"v":8.52e-19,"d":"8.52E-19"},"RNA-dependent RNA polymerase family protein.","AT3G50440","MES10",263.77,-1.891,0.19471,-9.7121,{"v":2.68e-22,"d":"2.68E-22"},{"v":9.62e-21,"d":"9.62E-21"},"full_name=methyl esterase 10. methylesterase. Encodes a protein shown to have methyl jasmonate esterase activity in vitro. This protein does not act on methyl IAA, MeSA, MeGA4, or MEGA9 in vitro.","AT1G16730","UP6",3096.8,1.0971,0.09241,11.872,1.66E-32,{"v":5.78e-31,"d":"5.78E-31"},"full_name=unknown protein 6. hypothetical protein.","AT4G37050","PLP4",122.93,-2.325,0.26076,-8.9163,{"v":4.82e-19,"d":"4.82E-19"},{"v":1.63e-17,"d":"1.63E-17"},"full_name=PATATIN-like protein 4. PATATIN-like protein 4. Patatin-related phospholipase A. Expressed in the floral gynaecium and is induced by abscisic acid (ABA) or phosphate deficiency in roots."]
["AT1G08560","SYP111",43.107,-4.0712,0.47401,-8.5888,{"v":8.79e-18,"d":"8.79E-18"},{"v":3.36e-16,"d":"3.36E-16"},"full_name=syntaxin of plants 111. syntaxin of plants 111. member of SYP11 syntaxin Gene Family","AT1G67590",null,80.991,-2.4335,0.26321,-9.2456,2.34E-20,{"v":8.66e-19,"d":"8.66E-19"},"Remorin family protein.","AT4G14780",null,295.51,-1.7553,0.18098,-9.6984,{"v":3.06e-22,"d":"3.06E-22"},{"v":1.1E-20,"d":"1.10E-20"},"Protein kinase superfamily protein.","AT5G20960","AO1",9011.4,1.1795,0.099364,11.87,1.69E-32,{"v":5.85e-31,"d":"5.85E-31"},"full_name=aldehyde oxidase 1. aldehyde oxidase 1. Encodes aldehyde oxidase AA01.","AT3G02300",null,579.63,-0.88934,0.09978,-8.9131,4.96E-19,1.68E-17,"Regulator of chromosome condensation (RCC1) family protein."]
["AT1G15290","REC3",176.99,-1.6111,0.18762,-8.5871,{"v":8.92e-18,"d":"8.92E-18"},{"v":3.39e-16,"d":"3.39E-16"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT2G22230",null,277.11,-1.5527,0.16801,-9.2417,2.43E-20,{"v":8.96e-19,"d":"8.96E-19"},"Thioesterase superfamily protein.","AT1G68470",null,207.31,-1.8861,0.19448,-9.6984,{"v":3.06e-22,"d":"3.06E-22"},{"v":1.1E-20,"d":"1.10E-20"},"Exostosin family protein.","AT5G57350","HA3",195.36,-8.0359,0.67734,-11.864,{"v":1.82e-32,"d":"1.82E-32"},{"v":6.3e-31,"d":"6.30E-31"},"full_name=H(+)-ATPase 3. H[+]-ATPase 3. member of Plasma membrane H+-ATPase family","AT5G64310","AGP1",121.38,2.5095,0.28168,8.9088,{"v":5.16e-19,"d":"5.16E-19"},1.74E-17,"full_name=arabinogalactan protein 1. arabinogalactan protein 1. Encodes arabinogalactan-protein (AGP1)."]
["AT4G28520","CRU3",1205500,0.86684,0.10095,8.587,{"v":8.92e-18,"d":"8.92E-18"},{"v":3.39e-16,"d":"3.39E-16"},"full_name=cruciferin 3. cruciferin 3. Encodes a 12S seed storage protein that is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT3G08940","LHCB4.2",169.05,-1.7789,0.19273,-9.2303,{"v":2.7E-20,"d":"2.70E-20"},{"v":9.95e-19,"d":"9.95E-19"},"full_name=light harvesting complex photosystem II. light harvesting complex photosystem II. Lhcb4.2 protein (Lhcb4.2, protein involved in the light harvesting complex of photosystem II","AT1G54630","ACP3",681.76,-1.6322,0.16836,-9.6943,{"v":3.19e-22,"d":"3.19E-22"},{"v":1.14e-20,"d":"1.14E-20"},"full_name=acyl carrier protein 3. acyl carrier protein 3. encodes an acyl carrier protein expressed in leaves, roots, and dry seeds. Gene expression is not regulated by light.","AT3G21600",null,254.74,2.2299,0.18798,11.863,1.85E-32,{"v":6.39e-31,"d":"6.39E-31"},"Senescence/dehydration-associated protein-like protein.","AT1G75490",null,4111.3,-0.92678,0.10411,-8.9023,{"v":5.47e-19,"d":"5.47E-19"},{"v":1.84e-17,"d":"1.84E-17"},"Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought."]
["AT1G67740","PSBY",908.12,-1.0572,0.12312,-8.5863,8.98E-18,{"v":3.41e-16,"d":"3.41E-16"},"full_name=photosystem II BY. photosystem II BY. PsbY precursor (psbY) mRNA. This single nuclear gene is imported into the chloroplasts where it is processed into two integral membrane proteins with identical topology (PsbY-1 and PsbY-2). The protein appears to bind manganese but its role is not well understood.","AT5G66430",null,52.588,4.2961,0.46573,9.2245,{"v":2.85e-20,"d":"2.85E-20"},1.05E-18,"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT5G47810","PFK2",1325.1,1.0849,0.1122,9.6691,{"v":4.08e-22,"d":"4.08E-22"},1.45E-20,"full_name=phosphofructokinase 2. phosphofructokinase 2.","AT4G36380","ROT3",374.53,-1.5215,0.12833,-11.856,{"v":2e-32,"d":"2.00E-32"},{"v":6.9e-31,"d":"6.90E-31"},"full_name=ROTUNDIFOLIA 3. Cytochrome P450 superfamily protein. Encodes a cytochrome P-450 gene that is involved in leaf blade expansion by controlling polar cell expansion in the leaf length direction. Member of the CYP90C CYP450 family. ROT3 was shown to be involved in brassinosteroid biosynthesis, most likely in the conversion step of typhasterol (TY) to castasterone (CS). As 6-deoxo-CS was unable to restore the phenotype of rot3-1, it has been postulated that ROT3 might be specifically involved in the conversion of TY to CS in the C6-oxidation pathway of brassinolide. Recently, CYP90C1 was shown to catalyse the C-23 hydroxylation of several brassinosteroids (the enzyme has a broad specificity for 22-hydroxylated substrates).","AT1G49600","RBP47A",888.63,0.95429,0.1072,8.9016,5.51E-19,{"v":1.85e-17,"d":"1.85E-17"},"full_name=RNA-binding protein 47A. RNA-binding protein 47A."]
["AT4G04760",null,205.09,1.9739,0.23006,8.5799,{"v":9.5e-18,"d":"9.50E-18"},{"v":3.6e-16,"d":"3.60E-16"},"Major facilitator superfamily protein.","AT1G20020","FNR2",62.823,-3.0391,0.32954,-9.222,2.92E-20,{"v":1.07e-18,"d":"1.07E-18"},"full_name=ferredoxin-NADP(+)-oxidoreductase 2. ferredoxin-NADP[+]-oxidoreductase 2. Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the stroma","AT5G65210","TGA1",659.58,1.2783,0.13229,9.6624,{"v":4.36e-22,"d":"4.36E-22"},1.55E-20,"full_name=TGACG sequence-specific binding protein 1. bZIP transcription factor family protein. Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.","AT4G16370","OPT3",117.4,-6.4412,0.54333,-11.855,{"v":2.03e-32,"d":"2.03E-32"},{"v":6.97e-31,"d":"6.97E-31"},"full_name=oligopeptide transporter. oligopeptide transporter. Encodes an oligopeptide transporter involved in metal homeostasis. It loads iron into the phloem, facilitates iron recirculation from the xylem to the phloem, and regulates both shoot-to-root iron signaling and iron redistribution from mature to developing tissues.","AT5G39720","AIG2L",5517.5,-0.9156,0.10292,-8.8962,{"v":5.78e-19,"d":"5.78E-19"},{"v":1.94e-17,"d":"1.94E-17"},"full_name=avirulence induced gene 2 like protein. avirulence induced protein 2 like protein."]
["AT3G54940",null,6230.2,0.83052,0.096963,8.5654,1.08E-17,{"v":4.07e-16,"d":"4.07E-16"},"Papain family cysteine protease.","AT1G07645","DSI-1VOC",1684.4,1.1344,0.12303,9.2209,{"v":2.95e-20,"d":"2.95E-20"},1.08E-18,"full_name=dessication-induced 1VOC superfamily protein. dessication-induced 1VOC superfamily protein.","AT1G53300","TTL1",96.636,-2.3873,0.24714,-9.6597,{"v":4.47e-22,"d":"4.47E-22"},{"v":1.59e-20,"d":"1.59E-20"},"full_name=tetratricopeptide-repeat thioredoxin-like 1. tetratricopetide-repeat thioredoxin-like 1. Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. The TTL family is required for osmotic stress tolerance and male sporogenesis.","AT4G29060","emb2726",179.27,2.1907,0.185,11.842,{"v":2.37e-32,"d":"2.37E-32"},{"v":8.13e-31,"d":"8.13E-31"},"full_name=embryo defective 2726. elongation factor Ts family protein.","AT2G36530","LOS2",1668.9,0.74597,0.083868,8.8946,5.86E-19,1.96E-17,"full_name=LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2. Enolase. Involved in light-dependent cold tolerance and encodes an enolase. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds."]
["AT1G75460",null,57.089,-2.8609,0.33403,-8.565,1.08E-17,{"v":4.08e-16,"d":"4.08E-16"},"ATP-dependent protease La (LON) domain protein.","AT1G30440",null,284.75,-1.3289,0.14413,-9.2201,{"v":2.97e-20,"d":"2.97E-20"},1.08E-18,"Phototropic-responsive NPH3 family protein.","AT1G75680","GH9B7",155.68,-1.8624,0.19293,-9.6531,4.77E-22,{"v":1.69e-20,"d":"1.69E-20"},"full_name=glycosyl hydrolase 9B7. glycosyl hydrolase 9B7.","AT1G60680",null,2537,1.5472,0.13087,11.822,{"v":3.01e-32,"d":"3.01E-32"},{"v":1.03e-30,"d":"1.03E-30"},"NAD(P)-linked oxidoreductase superfamily protein.","AT5G05410","DREB2A",2212.1,1.0133,0.11396,8.8913,{"v":6.04e-19,"d":"6.04E-19"},2.02E-17,"full_name=DRE-binding protein 2A. DRE-binding protein 2A. Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress%E2%80%93inducible genes."]
["AT5G20960","AO1",303.77,1.2502,0.14599,8.5636,{"v":1.09e-17,"d":"1.09E-17"},{"v":4.12e-16,"d":"4.12E-16"},"full_name=aldehyde oxidase 1. aldehyde oxidase 1. Encodes aldehyde oxidase AA01.","AT1G34430","EMB3003",558.48,-1.1565,0.12589,-9.187,{"v":4.04e-20,"d":"4.04E-20"},{"v":1.47e-18,"d":"1.47E-18"},"full_name=embryo defective 3003. 2-oxoacid dehydrogenases acyltransferase family protein.","AT5G09640","SCPL19",1998.5,-1.0526,0.10909,-9.6491,{"v":4.96e-22,"d":"4.96E-22"},1.75E-20,"full_name=serine carboxypeptidase-like 19. serine carboxypeptidase-like 19. encodes a serine carboxypeptidase-like (SCPL) protein. Mutants accumulate sinapoylglucose instead of sinapoylcholine, and have increased levels of choline and decreased activity of the enzyme sinapoylglucose:choline sinapoyltransferase.","AT1G02150",null,548.5,1.4962,0.1266,11.818,{"v":3.16e-32,"d":"3.16E-32"},{"v":1.08e-30,"d":"1.08E-30"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT2G38770","EMB2765",1498.5,0.65159,0.073322,8.8866,{"v":6.3e-19,"d":"6.30E-19"},{"v":2.1e-17,"d":"2.10E-17"},"full_name=EMBRYO DEFECTIVE 2765. P-loop containing nucleoside triphosphate hydrolases superfamily protein."]
["AT1G23640",null,71.748,2.8175,0.32908,8.562,{"v":1.11e-17,"d":"1.11E-17"},{"v":4.17e-16,"d":"4.17E-16"},"OBP32pep protein.","AT3G59780",null,49.773,-4.0142,0.43749,-9.1753,{"v":4.5e-20,"d":"4.50E-20"},{"v":1.64e-18,"d":"1.64E-18"},"Rhodanese/Cell cycle control phosphatase superfamily protein.","AT3G14680","CYP72A14",506.86,1.2239,0.12691,9.6436,5.23E-22,1.84E-20,"full_name=cytochrome P450, family 72, subfamily A, polypeptide 14. cytochrome P450, family 72, subfamily A, polypeptide 14. putative cytochrome P450","AT3G24220","NCED6",110.99,-3.0299,0.25657,-11.809,{"v":3.5e-32,"d":"3.50E-32"},1.19E-30,"full_name=nine-cis-epoxycarotenoid dioxygenase 6. nine-cis-epoxycarotenoid dioxygenase 6. A member of gene NCED-related gene family, encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene declines during the first 12h of imbibition.","AT3G45310",null,65.994,2.8948,0.32578,8.8858,{"v":6.35e-19,"d":"6.35E-19"},2.11E-17,"Cysteine proteinases superfamily protein."]
["AT3G20087","CYP705A17P",177.24,1.4992,0.17518,8.558,1.15E-17,{"v":4.3e-16,"d":"4.30E-16"},"full_name=cytochrome P450, family 705, subfamily A, polypeptide 17 pseudogene. pseudogene. a cytochrome P450 pseudogene","AT1G70800","EHB1",130.32,1.8792,0.20487,9.1723,{"v":4.63e-20,"d":"4.63E-20"},{"v":1.68e-18,"d":"1.68E-18"},"full_name=ENHANCED BENDING 1. Calcium-dependent lipid-binding (CaLB domain) family protein. Encodes a novel NPH3/phototropin binding factor with a calcium binding domain that negatively affects hypocotyl bending under blue light conditions in Arabidopsis thaliana and may regulate phototropism.","AT5G57900","SKIP1",511.58,1.421,0.14736,9.6432,{"v":5.25e-22,"d":"5.25E-22"},1.85E-20,"full_name=SKP1 interacting partner 1. SKP1 interacting partner 1. F-box protein, interacts with SKP1/ASK1 subunit of SCF ubiquitin ligase in a glucose-dependent manner","AT1G14520","MIOX1",1057.4,-1.6096,0.13633,-11.807,{"v":3.59e-32,"d":"3.59E-32"},1.22E-30,"full_name=myo-inositol oxygenase 1. myo-inositol oxygenase 1. Encodes MIOX1. Belongs to myo-inositol oxygenase gene family.","AT5G65480","CCI1",400.93,1.0571,0.11897,8.8851,{"v":6.39e-19,"d":"6.39E-19"},{"v":2.12e-17,"d":"2.12E-17"},"hypothetical protein."]
["AT4G18530",null,549.39,1.312,0.15332,8.5572,1.16E-17,{"v":4.32e-16,"d":"4.32E-16"},"lysine ketoglutarate reductase trans-splicing-like protein, putative (DUF707).","AT1G60950","FED A",315.2,-1.4901,0.16264,-9.162,{"v":5.1e-20,"d":"5.10E-20"},{"v":1.85e-18,"d":"1.85E-18"},"2Fe-2S ferredoxin-like superfamily protein. encodes a major leaf ferredoxin","AT5G63030","GRXC1",4581.4,1.0003,0.10395,9.6233,{"v":6.37e-22,"d":"6.37E-22"},2.24E-20,"full_name=glutaredoxin C1. Thioredoxin superfamily protein.","AT2G22510",null,119.93,-5.6169,0.47574,-11.807,{"v":3.6e-32,"d":"3.60E-32"},1.22E-30,"hydroxyproline-rich glycoprotein family protein.","AT1G58030","CAT2",755.84,0.94003,0.10602,8.8669,{"v":7.52e-19,"d":"7.52E-19"},{"v":2.49e-17,"d":"2.49E-17"},"full_name=cationic amino acid transporter 2. cationic amino acid transporter 2. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast."]
["AT2G43500","NLP8",631.96,1.0304,0.12048,8.5529,{"v":1.2e-17,"d":"1.20E-17"},{"v":4.48e-16,"d":"4.48E-16"},"Plant regulator RWP-RK family protein.","AT3G47190",null,53.449,-5.2524,0.57443,-9.1437,{"v":6.04e-20,"d":"6.04E-20"},2.18E-18,"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT2G23510","SDT",281.39,-1.7629,0.18343,-9.6107,{"v":7.21e-22,"d":"7.21E-22"},2.53E-20,"full_name=spermidine disinapoyl acyltransferase. spermidine disinapoyl acyltransferase.","AT5G52640","HSP90.1",7954.7,1.6453,0.13938,11.805,{"v":3.68e-32,"d":"3.68E-32"},{"v":1.25e-30,"d":"1.25E-30"},"full_name=heat shock protein 90.1. heat shock-like protein. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance.","AT5G57630","CIPK21",204.72,1.5276,0.17236,8.863,{"v":7.79e-19,"d":"7.79E-19"},2.57E-17,"full_name=CBL-interacting protein kinase 21. CBL-interacting protein kinase 21. CBL-interacting protein kinase"]
["AT2G47450","CAO",97.044,-2.2425,0.2622,-8.5527,{"v":1.2e-17,"d":"1.20E-17"},{"v":4.48e-16,"d":"4.48E-16"},"full_name=CHAOS. chloroplast signal recognition particle component (CAO). A component of the chloroplast signal recognition particle pathway that is involved in LHCP targeting. It is downregulated in response to high light. It recognizes the DPLG motif in Lhcb1.","AT5G07010","ST2A",1494.9,0.863,0.09455,9.1275,{"v":7.01e-20,"d":"7.01E-20"},2.53E-18,"full_name=sulfotransferase 2A. sulfotransferase 2A. Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).","AT2G18160","bZIP2",171.17,-2.8392,0.29543,-9.6105,{"v":7.22e-22,"d":"7.22E-22"},2.53E-20,"full_name=basic leucine-zipper 2. basic leucine-zipper 2. Encodes a b-ZIP transcription factor.","AT5G21150","AGO9",84.607,-5.544,0.4703,-11.788,{"v":4.5E-32,"d":"4.50E-32"},1.52E-30,"full_name=ARGONAUTE 9. Argonaute family protein. AGO9-dependent sRNA silencing is crucial to specify cell fate in the Arabidopsis ovule. AGO9 is expressed in reproductive companion cells but not in the associated male or female gametes or their precursors. Therefore, AGO9 acts non-cell autonomously to silencing the activity of TEs activity in the female gametophyte.","AT1G12110","NRT1.1",130.26,-1.8163,0.20513,-8.8544,{"v":8.41e-19,"d":"8.41E-19"},{"v":2.77e-17,"d":"2.77E-17"},"full_name=nitrate transporter 1.1. nitrate transporter 1.1. Encodes NRT1.1 (CHL1), a dual-affinity nitrate transporter. The protein is expressed in guard cells and function in stomatal opening. Mutants have less transpiration and are more tolerant to drought. Expressed in lateral roots. Involved in nitrate signaling which enables the plant root system to detect and exploit nitrate-rich soil patches. Comparing to the wild type, the mutant displays a strongly decreased lateral root proliferation phenotype in nitrate rich patches on growth medium."]
["AT5G20940",null,591.1,1.0609,0.12447,8.5227,1.56E-17,{"v":5.79e-16,"d":"5.79E-16"},"Glycosyl hydrolase family protein.","AT2G20750","EXPB1",91.724,-2.3954,0.26255,-9.1236,{"v":7.27e-20,"d":"7.27E-20"},{"v":2.62e-18,"d":"2.62E-18"},"full_name=expansin B1. expansin B1. member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)","AT5G54165",null,122.9,2.9078,0.30297,9.5976,{"v":8.18e-22,"d":"8.18E-22"},{"v":2.86e-20,"d":"2.86E-20"},"Avr9/Cf-9 rapidly elicited protein.","AT5G28540","BIP1",699.04,-1.4161,0.12055,-11.747,{"v":7.35e-32,"d":"7.35E-32"},2.48E-30,"heat shock protein 70 (Hsp 70) family protein. Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.","AT1G48750",null,1325.3,-1.3131,0.14833,-8.8527,{"v":8.54e-19,"d":"8.54E-19"},{"v":2.81e-17,"d":"2.81E-17"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein."]
["AT5G28000",null,77.703,-2.6478,0.31073,-8.5213,{"v":1.58e-17,"d":"1.58E-17"},{"v":5.85e-16,"d":"5.85E-16"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein.","AT1G72040","dNK",849.37,1.0378,0.11387,9.1145,{"v":7.9e-20,"d":"7.90E-20"},{"v":2.84e-18,"d":"2.84E-18"},"full_name=deoxyribonucleoside kinase. P-loop containing nucleoside triphosphate hydrolases superfamily protein. Encodes a multisubstrate deoxyribonucleoside kinase that salvages DNA precursors.","AT3G14330","CREF3",271.38,1.6414,0.17108,9.5939,{"v":8.48e-22,"d":"8.48E-22"},{"v":2.95e-20,"d":"2.95E-20"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT5G39160",null,93.506,-5.6801,0.48384,-11.74,{"v":7.99e-32,"d":"7.99E-32"},{"v":2.69e-30,"d":"2.69E-30"},"RmlC-like cupins superfamily protein.","AT4G02880",null,1002.2,0.75317,0.085089,8.8516,{"v":8.62e-19,"d":"8.62E-19"},{"v":2.83e-17,"d":"2.83E-17"},"ELKS/Rab6-interacting/CAST family protein."]
["AT5G12970","MCTP5",171.99,-1.6153,0.18958,-8.52,{"v":1.6e-17,"d":"1.60E-17"},{"v":5.9e-16,"d":"5.90E-16"},"Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein.","AT4G24150","GRF8",136.4,1.792,0.19701,9.096,{"v":9.37e-20,"d":"9.37E-20"},{"v":3.36e-18,"d":"3.36E-18"},"full_name=growth-regulating factor 8. growth-regulating factor 8. Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower.","AT4G37690","GT6",197.77,-1.7113,0.17859,-9.5822,{"v":9.5e-22,"d":"9.50E-22"},{"v":3.3E-20,"d":"3.30E-20"},"Galactosyl transferase GMA12/MNN10 family protein.","AT1G62225",null,974.12,-4.7947,0.40852,-11.737,{"v":8.26e-32,"d":"8.26E-32"},2.78E-30,"transmembrane protein.","AT1G80930",null,1309.7,0.66535,0.075285,8.8378,{"v":9.76e-19,"d":"9.76E-19"},{"v":3.2e-17,"d":"3.20E-17"},"MIF4G domain-containing protein / MA3 domain-containing protein."]
["AT2G30500","NET4B",790.27,-1.2205,0.14325,-8.5199,{"v":1.6e-17,"d":"1.60E-17"},{"v":5.9e-16,"d":"5.90E-16"},"full_name=Networked 4B. Kinase interacting (KIP1-like) family protein.","AT5G14370",null,185.07,-1.9678,0.21649,-9.0897,{"v":9.93e-20,"d":"9.93E-20"},{"v":3.55e-18,"d":"3.55E-18"},"CCT motif family protein.","AT4G01870",null,295.8,1.4445,0.15079,9.579,{"v":9.8e-22,"d":"9.80E-22"},{"v":3.4e-20,"d":"3.40E-20"},"tolB protein-like protein.","AT1G59900","E1 ALPHA",1010.4,1.2431,0.10593,11.735,{"v":8.44e-32,"d":"8.44E-32"},2.83E-30,"full_name=pyruvate dehydrogenase complex E1 alpha subunit. pyruvate dehydrogenase complex E1 alpha subunit. encodes the e1 alpha subunit of the pyruvate dehydrogenase complex (PDC)","AT1G17060","CYP72C1",97.798,2.1695,0.24591,8.8222,1.12E-18,{"v":3.67e-17,"d":"3.67E-17"},"full_name=cytochrome p450 72c1. cytochrome p450 72c1. Encodes a protein with similarity to other cytochrome P450's and is a homolog of BAS1. Over expression causes a dwarf phenotype resembling brassinolide resistant mutants. Double mutant analysis of sob7/bas1 loss of function mutants suggests these genes have redundant functions in light responsiveness. SOB7 may function in metabolizing brassinolides. Expressed in leaf, root, stem and silique but expression highest in flower and cauline leaves. Dominant overexpressing plants have dwarf phenotype, short siliques/seeds, rounded dark green leaves and short hypocotyls in light and dark. Loss of function alleles result in plants with long hypocotyls."]
["AT4G13510","AMT1;1",65.726,2.4478,0.28764,8.5099,1.74E-17,{"v":6.42e-16,"d":"6.42E-16"},"full_name=ammonium transporter 1;1. ammonium transporter 1;1. Encodes a plasma membrane localized ammonium transporter. Contains a cytosolic trans-activation domain essential for ammonium uptake.","AT4G20390","CASPL1B2",60.687,-2.9664,0.32637,-9.0893,9.97E-20,{"v":3.56e-18,"d":"3.56E-18"},"Uncharacterized protein family (UPF0497).","AT3G56260",null,145.66,-2.8512,0.29807,-9.5657,{"v":1.11e-21,"d":"1.11E-21"},{"v":3.86e-20,"d":"3.86E-20"},"hypothetical protein.","AT2G31810","AHASS1",182.87,2.1816,0.18591,11.735,{"v":8.48e-32,"d":"8.48E-32"},2.84E-30,"ACT domain-containing small subunit of acetolactate synthase protein.","AT1G15110","PSS1",375.77,1.056,0.11975,8.8184,1.16E-18,{"v":3.79e-17,"d":"3.79E-17"},"full_name=phosphatidylserine synthase 1. phosphatidyl serine synthase family protein. PSS1 encodes a base-exchange-type Phosphatidylserine (PS) synthase. Mutant analysis revealed its role in pollen maturation."]
["AT5G13900","LTPG30",48.117,-5.5154,0.65024,-8.482,{"v":2.21e-17,"d":"2.21E-17"},{"v":8.14e-16,"d":"8.14E-16"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT1G45207",null,49.75,-4.8149,0.5299,-9.0864,1.02E-19,{"v":3.65e-18,"d":"3.65E-18"},"Remorin family protein.","AT3G29810","COBL2",511.42,-1.4484,0.15155,-9.5569,1.21E-21,{"v":4.19e-20,"d":"4.19E-20"},"full_name=COBRA-like protein 2 precursor. COBRA-like protein 2 precursor.","AT5G48230","ACAT2",481.56,-2.0978,0.17897,-11.722,{"v":9.87e-32,"d":"9.87E-32"},3.29E-30,"full_name=acetoacetyl-CoA thiolase 2. acetoacetyl-CoA thiolase 2. Encodes an acetoacetyl-CoA thiolase that generates the bulk of the acetoacetyl-CoA precursor needed for the cytosolic localized, mevalonate-derived isoprenoids biosynthetic pathway. Loss-of-function mutants are embryo lethal.","AT1G72100",null,21275,-0.47844,0.054322,-8.8074,{"v":1.28e-18,"d":"1.28E-18"},{"v":4.17e-17,"d":"4.17E-17"},"late embryogenesis abundant domain-containing protein / LEA domain-containing protein."]
["AT1G08590","PXL1",145.67,1.7129,0.20204,8.4779,2.29E-17,{"v":8.42e-16,"d":"8.42E-16"},"Leucine-rich receptor-like protein kinase family protein. Encodes one of the two putative eLRR kinase closely related to PXY (At1g08590/PXL1 and At4g28650/PXL2). Insertion mutants in either pxl1 or pxl2 do not exhibit an obvious phenotype in the stem; double-mutant combinations of a Col allele, of pxy (pxy-3) with pxl1 and pxl2, generate a more severe vascular phenotype than pxy-3 alone, suggesting that these genes act synergistically with PXY in regulating vascular-tissue development in the stem.","AT4G14960","TUA6",515.43,-1.191,0.13134,-9.0678,1.21E-19,{"v":4.32e-18,"d":"4.32E-18"},"full_name=Tubulin alpha-6. Tubulin/FtsZ family protein. Encodes an alpha-tubulin isoform required for right handed helical growth.","AT1G52880","NAM",566.5,-1.5534,0.16272,-9.5462,{"v":1.35e-21,"d":"1.35E-21"},4.64E-20,"full_name=NO APICAL MERISTEM. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Transcription factor with a NAC domain. Homologous to the petunia gene NAM which is required for the development of the shoot. Expressed in the embryo.","AT5G17310","UGP2",2120,-0.94804,0.08088,-11.722,{"v":9.88e-32,"d":"9.88E-32"},3.29E-30,"full_name=UDP-glucose pyrophosphorylase 2. UDP-glucose pyrophosphorylase 2.","AT4G40030","H3.3",1490.1,-0.75577,0.085855,-8.8029,1.33E-18,{"v":4.33e-17,"d":"4.33E-17"},"Histone superfamily protein."]
["AT5G15260",null,324.53,1.207,0.14272,8.4572,{"v":2.74e-17,"d":"2.74E-17"},{"v":1e-15,"d":"1.00E-15"},"ribosomal protein L34e superfamily protein.","AT1G77580","VETH3",99.86,-2.47,0.27261,-9.0606,{"v":1.3e-19,"d":"1.30E-19"},{"v":4.61e-18,"d":"4.61E-18"},"filament-like protein (DUF869).","AT1G15910","FDM1",81.43,-2.9462,0.30864,-9.5456,{"v":1.35e-21,"d":"1.35E-21"},4.66E-20,"full_name=factor of DNA methylation 1. XH/XS domain-containing protein. Belongs to a subgroup of SGS3-like proteins that act redundantly in RNA-directed DNA methylation: AT1G15910 (FDM1), AT4G00380 (FDM2), AT3G12550 (FDM3), AT1G13790 (FDM4), AT1G80790 (FDM5).","AT4G02360",null,226.99,-2.9717,0.25392,-11.703,1.23E-31,{"v":4.09e-30,"d":"4.09E-30"},"transmembrane protein, putative (Protein of unknown function, DUF538).","ATMG00090","rps3",96.097,2.3383,0.26605,8.7892,{"v":1.51e-18,"d":"1.51E-18"},{"v":4.88e-17,"d":"4.88E-17"}]
["AT5G24600",null,145.53,1.6491,0.19528,8.4447,{"v":3.05e-17,"d":"3.05E-17"},{"v":1.11e-15,"d":"1.11E-15"},"TRP-like ion channel protein (Protein of unknown function, DUF599).","AT3G19450","ATCAD4",278.16,-1.425,0.15746,-9.0504,1.42E-19,{"v":5.05e-18,"d":"5.05E-18"},"GroES-like zinc-binding alcohol dehydrogenase family protein. Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates.","AT1G78780",null,192.72,1.6962,0.17777,9.5412,{"v":1.41e-21,"d":"1.41E-21"},{"v":4.85e-20,"d":"4.85E-20"},"pathogenesis-related family protein.","AT3G16770","EBP",3574.9,1.2673,0.10858,11.671,1.79E-31,{"v":5.93e-30,"d":"5.93E-30"},"full_name=ethylene-responsive element binding protein. ethylene-responsive element binding protein. Encodes a member of the ERF (ethylene response factor) subfamily B-2 of the plant specific ERF/AP2 transcription factor family (RAP2.3). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.It is localized to the nucleus and acts as a transcriptional activator through the GCC-box. It has been identified as a suppressor of Bax-induced cell death by functional screening in yeast and can also suppress Bax-induced cell death in tobacco plants. Overexpression of this gene in tobacco BY-2 cells confers resistance to H2O2 and heat stresses. Overexpression in Arabidopsis causes upregulation of PDF1.2 and GST6. It is part of the ethylene signaling pathway and is predicted to act downstream of EIN2 and CTR1, but not under EIN3.","AT2G02100","LCR69",69.954,2.8168,0.32063,8.7854,1.56E-18,{"v":5.04e-17,"d":"5.04E-17"},"full_name=low-molecular-weight cysteine-rich 69. low-molecular-weight cysteine-rich 69. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2."]
["AT1G64000","WRKY56",81.935,-2.2794,0.27038,-8.4303,3.45E-17,1.26E-15,"full_name=WRKY DNA-binding protein 56. WRKY DNA-binding protein 56. member of WRKY Transcription Factor; Group II-c","AT4G18620","PYL13",60.37,2.9605,0.32734,9.0444,{"v":1.51e-19,"d":"1.51E-19"},{"v":5.32e-18,"d":"5.32E-18"},"full_name=PYR1-like 13. PYR1-like 13. Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.","AT3G22400","LOX5",624.04,-2.2493,0.23589,-9.5358,{"v":1.49e-21,"d":"1.49E-21"},{"v":5.1e-20,"d":"5.10E-20"},"PLAT/LH2 domain-containing lipoxygenase family protein. Encodes lipoxygenase5 (LOX5). LOX5 activity in roots facilitates green peach aphid colonization of Arabidopsis foliage by promoting green peach aphid feeding from sieve element and water consumption from xylem.","AT1G70090","LGT8",94.724,-4.8827,0.41875,-11.66,2.04E-31,{"v":6.75e-30,"d":"6.75E-30"},"full_name=glucosyl transferase family 8. glucosyl transferase family 8. Encodes a protein with putative galacturonosyltransferase activity.","AT5G51210","OLEO3",520.11,-0.93427,0.10642,-8.7787,{"v":1.65e-18,"d":"1.65E-18"},{"v":5.34e-17,"d":"5.34E-17"},"full_name=oleosin3. oleosin3. Encodes oleosin3, a protein found in oil bodies, involved in seed lipid accumulation."]
["AT1G15030",null,557.83,1.0961,0.13006,8.4275,{"v":3.53e-17,"d":"3.53E-17"},{"v":1.29e-15,"d":"1.29E-15"},"hypothetical protein (DUF789). Encodes a Cysteine-rich peptide (CRP) family protein","AT2G43510","TI1",134.89,2.0891,0.23103,9.0423,1.53E-19,{"v":5.41e-18,"d":"5.41E-18"},"full_name=trypsin inhibitor protein 1. trypsin inhibitor protein 1. Member of the defensin-like (DEFL) family. Encodes putative trypsin inhibitor protein which may function in defense against herbivory.","AT2G22230",null,64.879,-3.5874,0.37631,-9.5331,1.53E-21,5.22E-20,"Thioesterase superfamily protein.","AT5G63530","FP3",1133.6,-1.5009,0.12886,-11.647,{"v":2.36e-31,"d":"2.36E-31"},{"v":7.82e-30,"d":"7.82E-30"},"full_name=farnesylated protein 3. farnesylated protein 3. Farnesylated protein that binds metals.","AT4G18620","PYL13",93.3,-2.3184,0.26415,-8.7771,{"v":1.68e-18,"d":"1.68E-18"},5.41E-17,"full_name=PYR1-like 13. PYR1-like 13. Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2."]
["AT4G29060","emb2726",155.22,-1.6062,0.19066,-8.4244,{"v":3.63e-17,"d":"3.63E-17"},1.32E-15,"full_name=embryo defective 2726. elongation factor Ts family protein.","AT2G22990","SNG1",551.09,1.1765,0.13017,9.038,{"v":1.6e-19,"d":"1.60E-19"},{"v":5.62e-18,"d":"5.62E-18"},"full_name=sinapoylglucose 1. sinapoylglucose 1. sinapoylglucose:malate sinapoyltransferase. Catalyzes the formation of sinapoylmalate from sinapoylglucose. Mutants accumulate excess sinapoylglucose.","AT2G37120",null,92.409,-2.6578,0.27897,-9.5271,1.62E-21,{"v":5.52e-20,"d":"5.52E-20"},"S1FA-like DNA-binding protein.","AT5G02790","GSTL3",90.279,-3.4321,0.2947,-11.646,{"v":2.4E-31,"d":"2.40E-31"},{"v":7.92e-30,"d":"7.92E-30"},"full_name=Glutathione transferase L3. Glutathione S-transferase family protein.","AT5G47910","RBOHD",364.83,1.1681,0.13314,8.7732,1.74E-18,{"v":5.59e-17,"d":"5.59E-17"},"full_name=respiratory burst oxidase homologue D. respiratory burst oxidase homologue D. NADPH/respiratory burst oxidase protein D (RbohD).Interacts with AtrbohF gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site."]
["AT2G45290","TKL2",2508,0.82949,0.098494,8.4217,{"v":3.71e-17,"d":"3.71E-17"},1.35E-15,"Transketolase.","AT3G44310","NIT1",609.09,-1.1404,0.1262,-9.0368,1.61E-19,{"v":5.67e-18,"d":"5.67E-18"},"full_name=nitrilase 1. nitrilase 1. Mutants are resistant to indole-3-acetonitrile (IAN). NIT1 catalyzes the terminal activation step in indole-acetic acid biosynthesis. Predominantly expressed isoform of nitrilase isoenzyme family. Aggregation of NIT1 in cells directly abutting wound sites is one of the earliest events associated with wound and herbicide-induced cell death. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. It is also involved in the conversion of IAN to IAM (indole-3-acetamide) and other non-auxin-related metabolic processes.","AT3G21520","DMP1",66.211,2.909,0.30585,9.5114,{"v":1.88e-21,"d":"1.88E-21"},{"v":6.41e-20,"d":"6.41E-20"},"full_name=DUF679 domain membrane protein 1. transmembrane protein, putative (DUF679 domain membrane protein 1). Encodes a protein is directly or indirectly involved in membrane fission during breakdown of the ER and the tonoplast during leaf senescence and in membrane fusion during vacuole biogenesis in roots.","AT1G72700","ALA5",115.37,-3.2489,0.27908,-11.642,{"v":2.53e-31,"d":"2.53E-31"},{"v":8.35e-30,"d":"8.35E-30"},"ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein.","AT4G23840",null,376.74,1.2107,0.13806,8.769,{"v":1.8e-18,"d":"1.80E-18"},{"v":5.79e-17,"d":"5.79E-17"},"Leucine-rich repeat (LRR) family protein."]
["AT2G20770","GCL2",238.25,1.3115,0.15581,8.4173,{"v":3.85e-17,"d":"3.85E-17"},{"v":1.39e-15,"d":"1.39E-15"},"full_name=GCR2-like 2. GCR2-like 2. Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor.GCL2 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase.","AT5G59170",null,21187,0.99851,0.11051,9.0358,{"v":1.63e-19,"d":"1.63E-19"},{"v":5.71e-18,"d":"5.71E-18"},"Proline-rich extensin-like family protein.","AT2G33580","LYK5",217.78,1.6354,0.17224,9.495,{"v":2.2e-21,"d":"2.20E-21"},{"v":7.48e-20,"d":"7.48E-20"},"full_name=LysM-containing receptor-like kinase 5. Protein kinase superfamily protein. Encodes a LysM-containing receptor-like kinase. LYK5 is a major chitin receptor and forms a chitin-induced complex with related kinase CERK1.","AT1G54957",null,107.5,-3.4347,0.29568,-11.616,3.41E-31,1.12E-29,"transmembrane protein.","AT1G20970",null,1264.1,0.74397,0.084858,8.7673,{"v":1.83e-18,"d":"1.83E-18"},{"v":5.86e-17,"d":"5.86E-17"},"calponin-like domain protein."]
["AT2G14095",null,60.005,2.7795,0.33058,8.408,{"v":4.17e-17,"d":"4.17E-17"},{"v":1.51e-15,"d":"1.51E-15"},"hypothetical protein.","AT1G05350",null,383.95,-1.1446,0.12685,-9.0235,1.82E-19,{"v":6.38e-18,"d":"6.38E-18"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT1G33490",null,1148.9,1.2147,0.12796,9.4928,{"v":2.25e-21,"d":"2.25E-21"},{"v":7.63e-20,"d":"7.63E-20"},"E3 ubiquitin-protein ligase.","AT1G47540",null,7500.8,-1.3486,0.11631,-11.595,{"v":4.37e-31,"d":"4.37E-31"},{"v":1.43e-29,"d":"1.43E-29"},"Scorpion toxin-like knottin superfamily protein.","AT1G21400",null,382.66,-1.0464,0.1194,-8.7636,1.89E-18,{"v":6.05e-17,"d":"6.05E-17"},"Thiamin diphosphate-binding fold (THDP-binding) superfamily protein."]
["AT5G65020","ANNAT2",237.42,-1.3214,0.15734,-8.3986,4.52E-17,{"v":1.63e-15,"d":"1.63E-15"},"full_name=annexin 2. annexin 2. Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane. They may be involved in the Golgi-mediated secretion of polysaccharides.","AT2G01210","ZAR1",53.574,-3.4759,0.38547,-9.0172,1.93E-19,{"v":6.74e-18,"d":"6.74E-18"},"Leucine-rich repeat protein kinase family protein.","AT3G14980","ROS4",146.65,-1.9759,0.20829,-9.4861,{"v":2.4e-21,"d":"2.40E-21"},{"v":8.12e-20,"d":"8.12E-20"},"full_name=REPRESSOR OF SILENCING 4. Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein. IDM1 is a histone H3 acetyltransferase that is capable of recognizing methylated DNA through its MBD domain and recognizing unmethylated histone H3K4 through its PHD domain. It negatively regulates DNA demethylation, preventing DNA hypermethylation of highly homologous multicopy genes and other repetitive sequences.","AT3G24650","ABI3",2188.8,-0.89937,0.077645,-11.583,{"v":5.02e-31,"d":"5.02E-31"},{"v":1.64e-29,"d":"1.64E-29"},"full_name=ABA INSENSITIVE 3. AP2/B3-like transcriptional factor family protein. Homologous to the maize transcription factor Viviparous-1. Full length ABI3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of ABI3 requires the B3 DNA-binding domain and an activation domain. In addition to the known N-terminal-located activation domain, a second transcription activation domain was found in the B1 region of ABI3. ABI3 is essential for seed maturation. Regulator of the transition between embryo maturation and early seedling development. Putative seed-specific transcriptional activator. ABI3 is a central regulator in ABA signaling and is unstable in vivo. It interacts with and can by polyubiquitinated by AIP2 in vivo. Based on double mutant analyses, ABI3 interacts genetically with both FUS3 and LEC1 and is involved in controlling accumulation of chlorophyll and anthocyanins, sensitivity to abscisic acid, and expression of the members of the 12S storage protein gene family. In addition, both FUS3 and LEC1 regulate positively the abundance of the ABI3 protein in the seed. Alternative splicing of ABI3 is developmentally regulated by SUA (AT3G54230).","AT5G10120",null,121.32,2.2244,0.25395,8.7593,1.96E-18,{"v":6.27e-17,"d":"6.27E-17"},"Ethylene insensitive 3 family protein."]
["AT5G37600","GSR 1",1766.9,1.1348,0.13521,8.3932,{"v":4.73e-17,"d":"4.73E-17"},{"v":1.7E-15,"d":"1.70E-15"},"full_name=glutamine synthase clone R1. hypothetical protein. encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium","AT4G14200",null,97.291,-2.2489,0.24949,-9.0141,1.98E-19,{"v":6.92e-18,"d":"6.92E-18"},"Pentatricopeptide repeat (PPR) superfamily protein.","AT5G61780","Tudor2",912.85,-1.2666,0.13398,-9.4538,{"v":3.27e-21,"d":"3.27E-21"},{"v":1.1e-19,"d":"1.10E-19"},"full_name=TUDOR-SN protein 2. TUDOR-SN protein 2. Involved in the regulation of AtGA20ox3 expression, as well as seed germination.","AT4G38080",null,98.056,-5.4152,0.46789,-11.573,{"v":5.62e-31,"d":"5.62E-31"},{"v":1.83e-29,"d":"1.83E-29"},"hydroxyproline-rich glycoprotein family protein.","AT5G51980",null,336.1,1.1834,0.13511,8.7589,{"v":1.97e-18,"d":"1.97E-18"},{"v":6.28e-17,"d":"6.28E-17"},"Transducin/WD40 repeat-like superfamily protein."]
["AT3G16000","MFP1",90.968,-2.0163,0.24023,-8.3932,{"v":4.73e-17,"d":"4.73E-17"},{"v":1.7E-15,"d":"1.70E-15"},"full_name=MAR binding filament-like protein 1. MAR binding filament-like protein 1. encodes a DNA-binding protein that binds to plastid DNA non-specifically and is associated with nucleoids and thylakoid membranes. The expression of the gene is correlated with the development of thylakoid membranes.","AT3G29200","CM1",1177.6,-0.91684,0.10186,-9.0006,{"v":2.25e-19,"d":"2.25E-19"},{"v":7.81e-18,"d":"7.81E-18"},"full_name=chorismate mutase 1. chorismate mutase 1. L-ascorbate peroxidase","AT5G51210","OLEO3",965.75,-1.4177,0.15007,-9.447,{"v":3.49e-21,"d":"3.49E-21"},{"v":1.18e-19,"d":"1.18E-19"},"full_name=oleosin3. oleosin3. Encodes oleosin3, a protein found in oil bodies, involved in seed lipid accumulation.","AT1G17620",null,514.61,-1.5156,0.13106,-11.565,6.23E-31,{"v":2.03e-29,"d":"2.03E-29"},"Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family.","AT3G29390","RIK",536.05,-0.89267,0.10208,-8.745,{"v":2.23e-18,"d":"2.23E-18"},{"v":7.08e-17,"d":"7.08E-17"},"full_name=RS2-interacting KH protein. RS2-interacting KH protein. Nuclear localized K-homology containing protein that interacts with AS1."]
["AT2G34170","DEG21",173.18,-1.8844,0.22453,-8.3926,{"v":4.76e-17,"d":"4.76E-17"},{"v":1.7E-15,"d":"1.70E-15"},"hypothetical protein (DUF688).","AT5G61130","PDCB1",53.749,-3.3035,0.36724,-8.9956,2.35E-19,{"v":8.16e-18,"d":"8.16E-18"},"full_name=plasmodesmata callose-binding protein 1. plasmodesmata callose-binding protein 1. Encodes a plasmodesmatal localized protein with callose binding activity. The function of PDCB1 is unknown but overexpression leads to the hyperaccumulation of callose.","AT5G16230","AAD3",724.47,-1.3718,0.1453,-9.4416,{"v":3.67e-21,"d":"3.67E-21"},1.24E-19,"Plant stearoyl-acyl-carrier-protein desaturase family protein.","AT5G18500",null,125.46,-2.7007,0.23375,-11.553,{"v":7.1e-31,"d":"7.10E-31"},{"v":2.31e-29,"d":"2.31E-29"},"Protein kinase superfamily protein.","AT1G61140","EDA16",526.59,0.9486,0.10849,8.7436,{"v":2.26e-18,"d":"2.26E-18"},{"v":7.15e-17,"d":"7.15E-17"},"full_name=embryo sac development arrest 16. SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein."]
["AT2G33520","ATHCYSTM7",884.55,1.0274,0.12254,8.3837,{"v":5.13e-17,"d":"5.13E-17"},{"v":1.83e-15,"d":"1.83E-15"},"cysteine-rich/transmembrane domain protein A.","AT4G13050","FATA2",212.74,-1.4584,0.16233,-8.9842,2.61E-19,{"v":9.03e-18,"d":"9.03E-18"},"Acyl-ACP thioesterase.","AT1G19540",null,2043.7,1.58,0.16736,9.4409,{"v":3.7e-21,"d":"3.70E-21"},1.24E-19,"NmrA-like negative transcriptional regulator family protein.","AT5G41460",null,90.655,-3.623,0.3138,-11.546,{"v":7.75e-31,"d":"7.75E-31"},{"v":2.52e-29,"d":"2.52E-29"},"transferring glycosyl group transferase (DUF604).","AT1G64180",null,337.16,-1.2949,0.1481,-8.7435,{"v":2.26e-18,"d":"2.26E-18"},{"v":7.15e-17,"d":"7.15E-17"},"intracellular protein transport protein USO1-like protein."]
["AT2G31750","UGT74D1",74.19,-3.2769,0.39101,-8.3806,{"v":5.27e-17,"d":"5.27E-17"},{"v":1.88e-15,"d":"1.88E-15"},"full_name=UDP-glucosyl transferase 74D1. UDP-glucosyl transferase 74D1. Encodes an auxin glycosyltransferase that is likely to be involved in regulation of auxin by glycosylation.","AT3G22790","NET1A",132.31,-2.0436,0.22778,-8.9715,{"v":2.92e-19,"d":"2.92E-19"},1.01E-17,"full_name=Networked 1A. Kinase interacting (KIP1-like) family protein. Encodes a member of the NET superfamily of proteins that potentially couples different membranes to the actin cytoskeleton in plant cells. It binds filamentous actin and is localized to the plasma membrane and plasmodesmata.","AT2G01910","ATMAP65-6",143.76,-2.2939,0.24303,-9.4388,{"v":3.77e-21,"d":"3.77E-21"},{"v":1.26e-19,"d":"1.26E-19"},"Microtubule associated protein (MAP65/ASE1) family protein. Binds microtubules. Induces a crisscross mesh of microtubules, not bundles. Not involved in microtubule polymerization nor nucleation. Localizes to mitochondria.","AT4G27140","SESA1",116170,-2.0314,0.17599,-11.543,{"v":8.03e-31,"d":"8.03E-31"},{"v":2.6e-29,"d":"2.60E-29"},"full_name=seed storage albumin 1. seed storage albumin 1.","AT2G17840","ERD7",2493.7,0.59575,0.068163,8.7401,{"v":2.33e-18,"d":"2.33E-18"},{"v":7.36e-17,"d":"7.36E-17"},"full_name=EARLY-RESPONSIVE TO DEHYDRATION 7. Senescence/dehydration-associated protein-like protein. Identified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis."]
["AT4G39330","CAD9",194.08,-1.5369,0.1834,-8.38,5.29E-17,{"v":1.89e-15,"d":"1.89E-15"},"full_name=cinnamyl alcohol dehydrogenase 9. cinnamyl alcohol dehydrogenase 9.","AT5G24950","CYP71A15",1593.3,1.1865,0.13255,8.9513,3.51E-19,1.21E-17,"full_name=cytochrome P450, family 71, subfamily A, polypeptide 15. cytochrome P450, family 71, subfamily A, polypeptide 15. putative cytochrome P450","AT2G46660","CYP78A6",135.31,1.8946,0.2008,9.4351,3.91E-21,{"v":1.31e-19,"d":"1.31E-19"},"full_name=cytochrome P450, family 78, subfamily A, polypeptide 6. cytochrome P450, family 78, subfamily A, polypeptide 6. Encodes a member of CYP78A cytochrome P450 monooxygenase protein family that is required in the sporophytic tissue of the mother plant to promote seed growth.","AT1G24460","TNO1",1176.9,-1.0093,0.087479,-11.538,{"v":8.49e-31,"d":"8.49E-31"},{"v":2.75e-29,"d":"2.75E-29"},"full_name=TGN-localized SYP41 interacting protein. TGN-related, localized SYP41 interacting protein. Encodes a novel protein that co-immunoprecipitates with SYP41. It is involved in vacuolar trafficking and salt tolerance, potentially via a role in vesicle fusion and in maintaining TGN structure or identity. Mutants display delayed formation of the Brefeldin A (BFA) compartment in cotyledons upon application of BFA.","AT2G29310",null,121.85,1.9994,0.2289,8.7346,{"v":2.45e-18,"d":"2.45E-18"},{"v":7.71e-17,"d":"7.71E-17"},"NAD(P)-binding Rossmann-fold superfamily protein."]
["AT1G31750",null,410.19,1.232,0.14714,8.3727,{"v":5.63e-17,"d":"5.63E-17"},{"v":2e-15,"d":"2.00E-15"},"proline-rich family protein.","AT1G77520",null,66.452,-2.7543,0.30777,-8.9493,{"v":3.58e-19,"d":"3.58E-19"},{"v":1.23e-17,"d":"1.23E-17"},"O-methyltransferase family protein.","AT1G44575","NPQ4",62.32,-3.3635,0.35657,-9.4329,{"v":3.99e-21,"d":"3.99E-21"},{"v":1.33e-19,"d":"1.33E-19"},"full_name=NONPHOTOCHEMICAL QUENCHING 4. Chlorophyll A-B binding family protein. Encoding PSII-S (CP22), a ubiquitous pigment-binding protein associated with photosystem II (PSII) of higher plants. Involved in nonphotochemical quenching rather than in photosynthesis. Mutant has a normal violaxanthin cycle but has a limited capacity of quenching singlet excited chlorophylls and is tolerant to lipid peroxidation.","AT1G55490","CPN60B",276.5,1.7578,0.1525,11.526,{"v":9.7e-31,"d":"9.70E-31"},3.13E-29,"full_name=chaperonin 60 beta. chaperonin 60 beta. encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. The protein has molecular chaperone activity for suppressing protein aggregation in vitro.","AT3G17860","JAZ3",1107.1,-0.81448,0.093337,-8.7263,{"v":2.63e-18,"d":"2.63E-18"},{"v":8.28e-17,"d":"8.28E-17"},"full_name=jasmonate-zim-domain protein 3. jasmonate-zim-domain protein 3. JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine."]
["AT5G64620","C/VIF2",235.24,-1.3223,0.15838,-8.3488,{"v":6.9E-17,"d":"6.90E-17"},2.45E-15,"full_name=cell wall / vacuolar inhibitor of fructosidase 2. cell wall / vacuolar inhibitor of fructosidase 2. Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling.","AT3G25530","GLYR1",205.17,-1.5961,0.17849,-8.9427,{"v":3.8E-19,"d":"3.80E-19"},1.31E-17,"full_name=glyoxylate reductase 1. glyoxylate reductase 1. Encodes gamma-hydroxybutyrate dehydrogenase (AtGHBDH). Contains a NADP-binding domain. GHBDH is proposed to function in oxidative stress tolerance.","AT3G27220",null,433.11,-2.4829,0.26325,-9.4316,{"v":4.04e-21,"d":"4.04E-21"},1.35E-19,"Galactose oxidase/kelch repeat superfamily protein.","AT4G24130",null,136.66,-2.4042,0.20891,-11.508,{"v":1.2e-30,"d":"1.20E-30"},3.87E-29,"DUF538 family protein (Protein of unknown function, DUF538).","AT3G02910",null,226.07,1.6769,0.19221,8.7244,2.68E-18,{"v":8.4e-17,"d":"8.40E-17"},"AIG2-like (avirulence induced gene) family protein."]
["AT5G38530","TSBtype2",282.74,1.2258,0.14689,8.3446,{"v":7.15e-17,"d":"7.15E-17"},{"v":2.53e-15,"d":"2.53E-15"},"full_name=tryptophan synthase beta type 2. tryptophan synthase beta type 2. TSBtype2 encodes a type 2 tryptophan synthase beta subunit that catalyzes a condensation reaction between serine and indole to generate tryptophan.It appears to form a homodimer. Its biological role has not yet been determined, but it has a very high affinity for indole which may be involved in allowing TSBtype2 to carefully limit free indole build-up. But, to date no overall change in plant morphology or seedling root growth have been observed in tsbtype2 mutants, indicating that this gene is not essential under optimum conditions. n most organs, TSBtype2 is transcripts are expressed at a lower level than TSB1 but in dry seeds they are expressed at comparable levels.","AT3G10350","GET3B",761.02,0.96633,0.10809,8.9401,{"v":3.89e-19,"d":"3.89E-19"},1.33E-17,"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT3G01990","ACR6",106.69,2.198,0.23306,9.4311,{"v":4.06e-21,"d":"4.06E-21"},1.35E-19,"full_name=ACT domain repeat 6. ACT domain repeat 6. Member of a small family of ACT domain containing proteins in Arabidopsis. ACT domains are involved in amino acid binding.","AT5G62800",null,405.51,-1.8012,0.15656,-11.505,1.24E-30,{"v":3.99e-29,"d":"3.99E-29"},"Protein with RING/U-box and TRAF-like domain.","AT1G07530","SCL14",2280.4,0.68624,0.078659,8.7242,2.68E-18,{"v":8.4e-17,"d":"8.40E-17"},"full_name=SCARECROW-like 14. SCARECROW-like 14. Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm."]
["AT1G48480","RKL1",210.79,-1.3936,0.16707,-8.3414,{"v":7.34e-17,"d":"7.34E-17"},{"v":2.6E-15,"d":"2.60E-15"},"full_name=receptor-like kinase 1. receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene","AT4G01580",null,50.764,-3.6327,0.40641,-8.9386,{"v":3.94e-19,"d":"3.94E-19"},{"v":1.35e-17,"d":"1.35E-17"},"AP2/B3-like transcriptional factor family protein.","AT2G02850","ARPN",1105.1,1.6026,0.17009,9.4222,{"v":4.42e-21,"d":"4.42E-21"},{"v":1.47e-19,"d":"1.47E-19"},"full_name=plantacyanin. plantacyanin. Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.","AT4G13830","J20",411.41,1.7414,0.15146,11.497,1.36E-30,{"v":4.37e-29,"d":"4.37E-29"},"full_name=DNAJ-like 20. DNAJ-like 20. DnaJ-like protein (J20); nuclear gene","AT4G02430","SR34b",214.38,-1.7226,0.19757,-8.7188,{"v":2.81e-18,"d":"2.81E-18"},{"v":8.79e-17,"d":"8.79E-17"},"full_name=Serine/Arginine-Rich Protein Splicing Factor 34b. RNA-binding (RRM/RBD/RNP motifs) family protein. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926."]
["AT5G09660","PMDH2",65.348,-2.4615,0.29578,-8.3219,{"v":8.66e-17,"d":"8.66E-17"},{"v":3.05e-15,"d":"3.05E-15"},"full_name=peroxisomal NAD-malate dehydrogenase 2. peroxisomal NAD-malate dehydrogenase 2. encodes a microbody NAD-dependent malate dehydrogenase encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.","AT5G62170","TRM25",415.36,-1.4182,0.15867,-8.938,3.96E-19,{"v":1.35e-17,"d":"1.35E-17"},"full_name=TON1 Recruiting Motif 25. LOW protein: M-phase inducer phosphatase-like protein.","AT1G07010","SLP1",123.57,-2.3979,0.25457,-9.4195,{"v":4.53e-21,"d":"4.53E-21"},{"v":1.5E-19,"d":"1.50E-19"},"full_name=Shewenella-like protein phosphatase 1. Calcineurin-like metallo-phosphoesterase superfamily protein.","AT2G38210","PDX1L4",130.56,2.7839,0.24249,11.481,{"v":1.65e-30,"d":"1.65E-30"},{"v":5.28e-29,"d":"5.28E-29"},"full_name=putative PDX1-like protein 4. putative PDX1-like protein 4.","AT4G37260","MYB73",473.41,1.3085,0.15015,8.7143,{"v":2.93e-18,"d":"2.93E-18"},9.13E-17,"full_name=myb domain protein 73. myb domain protein 73. Member of the R2R3 factor gene family."]
["AT1G02730","CSLD5",42.846,-4.5817,0.55154,-8.3072,{"v":9.8e-17,"d":"9.80E-17"},{"v":3.45e-15,"d":"3.45E-15"},"full_name=cellulose synthase-like D5. cellulose synthase-like D5. Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.","AT4G13180",null,119,2.0836,0.23322,8.934,{"v":4.11e-19,"d":"4.11E-19"},{"v":1.4e-17,"d":"1.40E-17"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT4G27260","WES1",124.11,-2.1314,0.22637,-9.4156,{"v":4.7e-21,"d":"4.70E-21"},1.56E-19,"Auxin-responsive GH3 family protein. encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin. It is involved in camalexin biosynthesis via conjugating indole-3-carboxylic acid (ICA) and cysteine (Cys).","AT1G48570",null,290.39,1.737,0.15131,11.48,{"v":1.66e-30,"d":"1.66E-30"},{"v":5.31e-29,"d":"5.31E-29"},"zinc finger (Ran-binding) family protein.","AT3G22640","PAP85",255050,-0.57959,0.066542,-8.7102,{"v":3.03e-18,"d":"3.03E-18"},{"v":9.45e-17,"d":"9.45E-17"},"cupin family protein."]
["AT1G30110","NUDX25",107.73,1.8013,0.21686,8.3061,{"v":9.89e-17,"d":"9.89E-17"},{"v":3.48e-15,"d":"3.48E-15"},"full_name=nudix hydrolase homolog 25. nudix hydrolase homolog 25. Encodes a ppGpp pyrophosphohydrolase.","AT1G60810","ACLA-2",165.75,-1.6279,0.1824,-8.9248,{"v":4.47e-19,"d":"4.47E-19"},{"v":1.52e-17,"d":"1.52E-17"},"full_name=ATP-citrate lyase A-2. ATP-citrate lyase A-2. One of the three genes encoding subunit A of the trimeric enzyme ATP Citrate lyase","AT5G52310","LTI78",216.46,1.9598,0.20818,9.4142,{"v":4.77e-21,"d":"4.77E-21"},{"v":1.57e-19,"d":"1.57E-19"},"full_name=LOW-TEMPERATURE-INDUCED 78. low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A). cold regulated gene, the 5' region of cor78 has cis-acting regulatory elements that can impart cold-regulated gene expression","AT2G34560","CCP1",377.4,-1.6101,0.14041,-11.467,1.93E-30,{"v":6.15e-29,"d":"6.15E-29"},"full_name=conserved in ciliated species and in the land plants 1. P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT5G45830","DOG1",622.95,-1.6216,0.18659,-8.6908,{"v":3.6e-18,"d":"3.60E-18"},1.12E-16,"full_name=DELAY OF GERMINATION 1. delay of germination 1. Encodes DOG1 (DELAY OF GERMINATION 1). A quantitative trait locus involved in the control of seed dormancy. Belongs to a novel plant-specific gene family whose members include: DOG1-like 1-4 (DOGL1-4, At4g18660, At4g18680, At4g18690, At4g18650 respectively) and DOG1. DOG1 expression is seed-specific."]
["AT1G67830","FXG1",52.407,-2.8471,0.34323,-8.295,1.09E-16,3.81E-15,"full_name=alpha-fucosidase 1. alpha-fucosidase 1. Encodes a protein with &#945;-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFXG1 was able to remove the t-fucosyl residues of XXFG xyloglucan oligosaccharides.","AT3G49250","DMS3",184.88,-1.5852,0.17763,-8.9239,{"v":4.5e-19,"d":"4.50E-19"},1.53E-17,"full_name=DEFECTIVE IN MERISTEM SILENCING 3. defective in meristem silencing 3. Similar to hinge-domain region of structural maintenance of chromosomes (SMC)proteins.Putative chromosome architecture protein that can potentialy link nucleic acids in facilitating an RNA1-mediated epigenetic modification involving secondary siRNA and spreading of DNA methylation.","AT1G33700",null,1504.9,-1.0131,0.10762,-9.4133,{"v":4.81e-21,"d":"4.81E-21"},1.58E-19,"Beta-glucosidase, GBA2 type family protein.","AT3G52370","FLA15",80.38,-5.5892,0.48777,-11.459,2.13E-30,6.78E-29,"full_name=FASCICLIN-like arabinogalactan protein 15 precursor. FASCICLIN-like arabinogalactan protein 15 precursor.","AT2G42680","MBF1A",594.38,-0.98947,0.11394,-8.684,{"v":3.82e-18,"d":"3.82E-18"},{"v":1.19e-16,"d":"1.19E-16"},"full_name=multiprotein bridging factor 1A. multiprotein bridging factor 1A. One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated."]
["AT4G16640","AT1-MMP",287.3,-1.2357,0.14903,-8.2914,1.12E-16,{"v":3.92e-15,"d":"3.92E-15"},"Matrixin family protein.","AT5G62220","GT18",124.51,1.8742,0.21007,8.9214,{"v":4.6e-19,"d":"4.60E-19"},1.56E-17,"full_name=glycosyltransferase 18. glycosyltransferase 18. Encodes a Golgi apparatus-localized galactosyltransferase involved in galactosyl-substitution of xyloglucan at position 2.","AT5G66080","APD9",389.38,1.3875,0.14746,9.4093,{"v":5e-21,"d":"5.00E-21"},1.64E-19,"Protein phosphatase 2C family protein.","AT2G32120","HSP70T-2",4278.7,1.2328,0.10773,11.443,{"v":2.55e-30,"d":"2.55E-30"},{"v":8.09e-29,"d":"8.09E-29"},"full_name=heat-shock protein 70T-2. heat-shock protein 70T-2.","AT5G16470","MBS2",1127,0.75078,0.08647,8.6826,{"v":3.87e-18,"d":"3.87E-18"},{"v":1.2E-16,"d":"1.20E-16"},"zinc finger (C2H2 type) family protein."]
["AT3G45780","PHOT1",139.48,-1.7455,0.21056,-8.2896,1.14E-16,{"v":3.97e-15,"d":"3.97E-15"},"full_name=phototropin 1. phototropin 1. Blue-light photoreceptor. Contains a light activated serine-threonine kinase domain and LOV1 and LOV2 repeats. Mutants are defective in blue-light response. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT1 undergoes blue-light-dependent autophosphorylation. At least eight phosphorylation sites have been identified in PHOT1. Phosphorylation of serine851 in the activation loop of PHOT1 appears to be required for stomatal opening, chloroplast accumulation, leaf flattening, and phototropism, and phosphorylation of serine849 may also contribute to the regulation of these responses. Phosphorylation-dependent binding of 14-3-3 proteins to the Hinge1 region of PHOT1 appears to require serine350 and serine376.","AT3G04150",null,717.84,1.2905,0.14472,8.9173,{"v":4.78e-19,"d":"4.78E-19"},1.62E-17,"RmlC-like cupins superfamily protein.","AT5G13790","AGL15",301.88,-1.7119,0.18219,-9.3962,{"v":5.66e-21,"d":"5.66E-21"},{"v":1.86e-19,"d":"1.86E-19"},"full_name=AGAMOUS-like 15. AGAMOUS-like 15. AGL15 (AGAMOUS-Like 15) is a member of the MADS domain family of regulatory factors. Although AGL15 is preferentially expressed during embryogenesis, AGL15 is also expressed in leaf primordia, shoot apical meristems and young floral buds, suggesting that AGL15 may play a role during post-germinative development. Transgenic plants that ectopically express AGL15 show delays in the transition to flowering, perianth abscission and senescence and fruit and seed maturation. Role in embryogenesis and gibberellic acid catabolism. Targets B3 domain transcription factors that are key regulators of embryogenesis.","AT1G71695",null,444.89,-1.718,0.15031,-11.43,{"v":2.96e-30,"d":"2.96E-30"},{"v":9.39e-29,"d":"9.39E-29"},"Peroxidase superfamily protein.","AT5G48100","TT10",64.667,-6.5641,0.75613,-8.6812,{"v":3.92e-18,"d":"3.92E-18"},{"v":1.21e-16,"d":"1.21E-16"},"full_name=TRANSPARENT TESTA 10. Laccase/Diphenol oxidase family protein. Encodes a protein that is similar to laccase-like polyphenol oxidases. Involved in lignin and flavonoids biosynthesis. It has four conserved copper binding domains. Expressed in developing testa, where it colocalizes with the flavonoid end products proanthocyanidins and flavonols. Mutant plants exhibited a delay in developmentally determined browning of the testa, characterized by the pale brown color of seed coat. The tt10 mutant seeds accumulate more epicatechin monomers and more soluble proanthocyanidins than wild-type seeds. Flavonol composition was also affected in tt10 seeds, which exhibited a higher ratio of quercetin rhamnoside monomers versus dimers than wild-type seeds."]
["AT5G66420",null,402.61,1.1257,0.13583,8.2871,{"v":1.16e-16,"d":"1.16E-16"},{"v":4.05e-15,"d":"4.05E-15"},"TIM-barrel signal transduction protein.","AT2G46710","ROPGAP3",223.2,-1.4665,0.16482,-8.8973,{"v":5.72e-19,"d":"5.72E-19"},{"v":1.93e-17,"d":"1.93E-17"},"full_name=ROP guanosine triphosphatase (GTPase)-activating protein 3. Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein.","AT5G49100",null,81.657,-2.7609,0.29417,-9.3854,{"v":6.27e-21,"d":"6.27E-21"},{"v":2.05e-19,"d":"2.05E-19"},"vitellogenin-like protein.","AT3G25910","SIZ1",1126.2,0.99675,0.087229,11.427,{"v":3.07e-30,"d":"3.07E-30"},{"v":9.72e-29,"d":"9.72E-29"},"MAP kinase kinase kinase, putative (DUF1644).","AT5G41610","CHX18",337.28,1.1679,0.1346,8.6763,{"v":4.09e-18,"d":"4.09E-18"},1.26E-16,"full_name=cation/H+ exchanger 18. cation/H+ exchanger 18. member of Putative Na+/H+ antiporter family"]
["AT5G05965",null,175.61,-2.4655,0.29781,-8.279,{"v":1.24e-16,"d":"1.24E-16"},4.32E-15,"cell wall RBR3-like protein.","AT3G15260",null,4415.6,0.8216,0.092508,8.8814,{"v":6.6e-19,"d":"6.60E-19"},2.23E-17,"Protein phosphatase 2C family protein.","AT3G14660","CYP72A13",608.82,1.1486,0.12242,9.382,{"v":6.47e-21,"d":"6.47E-21"},{"v":2.12e-19,"d":"2.12E-19"},"full_name=cytochrome P450, family 72, subfamily A, polypeptide 13. cytochrome P450, family 72, subfamily A, polypeptide 13. putative cytochrome P450","AT3G62660","GATL7",285.32,-2.197,0.19227,-11.427,3.08E-30,{"v":9.72e-29,"d":"9.72E-29"},"full_name=galacturonosyltransferase-like 7. galacturonosyltransferase-like 7. Encodes a protein with putative galacturonosyltransferase activity.","AT4G35830","ACO1",2226.5,0.55492,0.063961,8.676,{"v":4.1e-18,"d":"4.10E-18"},1.26E-16,"full_name=aconitase 1. aconitase 1. Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. This enzyme can also specifically bind to the 5' UTR of CSD2 in vitro."]
["AT1G15150",null,129.82,-1.702,0.20596,-8.2639,1.41E-16,{"v":4.9e-15,"d":"4.90E-15"},"MATE efflux family protein.","AT4G14690","ELIP2",195.74,-2.1085,0.23747,-8.8789,{"v":6.75e-19,"d":"6.75E-19"},{"v":2.27e-17,"d":"2.27E-17"},"full_name=EARLY LIGHT-INDUCIBLE PROTEIN 2. Chlorophyll A-B binding family protein. Encodes an early light-induced protein. ELIPs are thought not to be directly involved in the synthesis and assembly of specific photosynthetic complexes, but rather affect the biogenesis of all chlorophyll-binding complexes. A study (PMID 17553115) has shown that the chlorophyll synthesis pathway was downregulated as a result of constitutive ELIP2 expression, leading to decreased chlorophyll availability for the assembly of pigment-binding proteins for photosynthesis.","AT1G34430","EMB3003",182.53,-2.06,0.21963,-9.3791,{"v":6.65e-21,"d":"6.65E-21"},{"v":2.17e-19,"d":"2.17E-19"},"full_name=embryo defective 3003. 2-oxoacid dehydrogenases acyltransferase family protein.","AT5G54070","HSFA9",2779.6,1.3039,0.11422,11.415,{"v":3.52e-30,"d":"3.52E-30"},{"v":1.11e-28,"d":"1.11E-28"},"full_name=heat shock transcription factor A9. heat shock transcription factor A9. A member of Heat Stress Transcription Factor (Hsf) family. Not responding to heat stress. Is regulated by the seed-specific transcription factor ABI3. In turn, it regulates other heat stress proteins including Hsp17.4-CI, Hsp17.7-CII and Hsp101 during seed maturation.","AT5G13110","G6PD2",314.01,1.241,0.14312,8.6708,{"v":4.29e-18,"d":"4.29E-18"},1.32E-16,"full_name=glucose-6-phosphate dehydrogenase 2. glucose-6-phosphate dehydrogenase 2. Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root."]
["AT2G27380","EPR1",93478,1.2099,0.1465,8.2591,1.47E-16,{"v":5.09e-15,"d":"5.09E-15"},"full_name=extensin proline-rich 1. extensin proline-rich 1. Encodes an extensin like gene involved in seed germination.","AT5G02580",null,145.17,1.7183,0.19366,8.8729,{"v":7.13e-19,"d":"7.13E-19"},{"v":2.39e-17,"d":"2.39E-17"},"argininosuccinate lyase.","AT2G25520",null,2222.1,-0.99106,0.10584,-9.3634,{"v":7.72e-21,"d":"7.72E-21"},2.51E-19,"Drug/metabolite transporter superfamily protein.","AT5G49280",null,74.958,-5.0315,0.44246,-11.372,{"v":5.79e-30,"d":"5.79E-30"},1.82E-28,"hydroxyproline-rich glycoprotein family protein.","AT5G42900","COR27",252.11,1.3347,0.1542,8.6555,{"v":4.91e-18,"d":"4.91E-18"},{"v":1.51e-16,"d":"1.51E-16"},"full_name=cold regulated gene 27. cold regulated protein 27."]
["AT5G19940","FBN6",65.465,-2.3863,0.28896,-8.2583,{"v":1.48e-16,"d":"1.48E-16"},{"v":5.11e-15,"d":"5.11E-15"},"Plastid-lipid associated protein PAP / fibrillin family protein.","AT5G49555",null,110.63,-1.9888,0.22421,-8.8702,{"v":7.3e-19,"d":"7.30E-19"},{"v":2.45e-17,"d":"2.45E-17"},"FAD/NAD(P)-binding oxidoreductase family protein.","AT1G04560",null,56817,1.0071,0.10779,9.3435,9.32E-21,3.03E-19,"AWPM-19-like family protein.","AT1G05680","UGT74E2",153.2,2.2975,0.20205,11.371,{"v":5.86e-30,"d":"5.86E-30"},{"v":1.84e-28,"d":"1.84E-28"},"full_name=Uridine diphosphate glycosyltransferase 74E2. Uridine diphosphate glycosyltransferase 74E2. Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.","AT1G65720",null,1072.5,-1.0119,0.11694,-8.6532,{"v":5.01e-18,"d":"5.01E-18"},1.53E-16,"transmembrane protein."]
["AT1G32380","PRS2",409.88,1.0717,0.1298,8.257,{"v":1.49e-16,"d":"1.49E-16"},{"v":5.16e-15,"d":"5.16E-15"},"full_name=phosphoribosyl pyrophosphate (PRPP) synthase 2. phosphoribosyl pyrophosphate (PRPP) synthase 2. Encodes a P-dependent phosphoribosyl pyrophosphate (PRPP) synthase.","AT1G32380","PRS2",740.79,0.92154,0.10393,8.8669,{"v":7.52e-19,"d":"7.52E-19"},{"v":2.52e-17,"d":"2.52E-17"},"full_name=phosphoribosyl pyrophosphate (PRPP) synthase 2. phosphoribosyl pyrophosphate (PRPP) synthase 2. Encodes a P-dependent phosphoribosyl pyrophosphate (PRPP) synthase.","AT4G35830","ACO1",2679.1,-0.94654,0.10137,-9.3378,{"v":9.84e-21,"d":"9.84E-21"},3.19E-19,"full_name=aconitase 1. aconitase 1. Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. This enzyme can also specifically bind to the 5' UTR of CSD2 in vitro.","AT3G28050","UMAMIT41",142.17,-2.4322,0.21403,-11.364,{"v":6.35e-30,"d":"6.35E-30"},1.99E-28,"full_name=Usually multiple acids move in and out Transporters 41. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT3G45630",null,375.44,1.0847,0.12555,8.6395,5.65E-18,1.73E-16,"RNA binding (RRM/RBD/RNP motifs) family protein."]
["AT4G19170","NCED4",110.81,1.8947,0.22947,8.2565,{"v":1.5E-16,"d":"1.50E-16"},5.17E-15,"full_name=nine-cis-epoxycarotenoid dioxygenase 4. nine-cis-epoxycarotenoid dioxygenase 4. chloroplast-targeted member of a family of enzymes similar to nine-cis-epoxycarotenoid dioxygenase","AT5G10160",null,272.37,-1.2731,0.14379,-8.8541,{"v":8.43e-19,"d":"8.43E-19"},{"v":2.82e-17,"d":"2.82E-17"},"Thioesterase superfamily protein.","AT5G07350","Tudor1",1373.1,-0.96439,0.1033,-9.3362,{"v":9.99e-21,"d":"9.99E-21"},{"v":3.23e-19,"d":"3.23E-19"},"full_name=TUDOR-SN protein 1. TUDOR-SN protein 1. RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.","AT1G74960","FAB1",108.36,-3.4433,0.30313,-11.359,{"v":6.69e-30,"d":"6.69E-30"},{"v":2.09e-28,"d":"2.09E-28"},"full_name=fatty acid biosynthesis 1. fatty acid biosynthesis 1. Encodes a plastidic beta-ketoacyl-ACP synthase II, involved in fatty acid elongation from 16:0-ACP to 18:0-ACP. Homozygous knock-out mutants are embryo lethal, indicating early embryo development is sensitive to elevated 16:0.","AT1G04360","ATL1",103.7,2.2824,0.26443,8.6313,{"v":6.07e-18,"d":"6.07E-18"},1.85E-16,"RING/U-box superfamily protein."]
["AT3G15820","ROD1",862.82,-1.1456,0.1392,-8.2299,{"v":1.87e-16,"d":"1.87E-16"},{"v":6.45e-15,"d":"6.45E-15"},"full_name=REDUCED OLEATE DESATURATION 1. phosphatidic acid phosphatase-related / PAP2-like protein. Functions as phosphatidylcholine:diacylglycerol cholinephosphotransferase, a major reaction for the transfer of 18:1 into phosphatidylcholine for desaturation and also for the reverse transfer of 18:2 and 18:3 into the triacylglycerols synthesis pathway","AT1G54780","TLP18.3",46.009,-4.2858,0.48437,-8.8482,{"v":8.9e-19,"d":"8.90E-19"},{"v":2.96e-17,"d":"2.96E-17"},"full_name=thylakoid lumen protein 18.3. thylakoid lumen 18.3 kDa protein. Encodes a thylakoid lumen protein regulating photosystem II repair cycle. Has acid phosphatase activity.","AT3G61310","AHL11",115.74,-3.262,0.34941,-9.3359,{"v":1e-20,"d":"1.00E-20"},{"v":3.24e-19,"d":"3.24E-19"},"AT hook motif DNA-binding family protein.","AT3G46600",null,121.77,2.8612,0.25205,11.352,{"v":7.25e-30,"d":"7.25E-30"},{"v":2.26e-28,"d":"2.26E-28"},"GRAS family transcription factor.","AT3G53730",null,258.39,-1.5724,0.18226,-8.6273,{"v":6.28e-18,"d":"6.28E-18"},1.91E-16,"Histone superfamily protein."]
["AT5G40420","OLEO2",72509,0.70093,0.085214,8.2255,1.94E-16,{"v":6.68e-15,"d":"6.68E-15"},"full_name=oleosin 2. oleosin 2. Encodes oleosin2, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.","AT1G74420","FUT3",48.784,-3.5131,0.39719,-8.8448,{"v":9.17e-19,"d":"9.17E-19"},{"v":3.05e-17,"d":"3.05E-17"},"full_name=fucosyltransferase 3. fucosyltransferase 3. Predicted fucosyltransferase, based on similarity to FUT1, but not functionally redundantwith FUT1.","AT1G08810","MYB60",478.59,-1.7034,0.18261,-9.3282,1.08E-20,{"v":3.47e-19,"d":"3.47E-19"},"full_name=myb domain protein 60. myb domain protein 60. putative transcription factor of the R2R3-MYB gene family. Transcript increases under conditions that promote stomatal opening (white and blue light, abi1-1 mutation) and decreases under conditions that trigger stomatal closure (ABA, desiccation, darkness), with the exception of elevated CO2. Expressed exclusively in guard cells of all tissues. It is required for light-induced opening of stomata. Mutant shows reduced stomatal aperture which helps to limit water loss during drought.","AT3G47750","ABCA4",78.557,-3.8784,0.34188,-11.345,{"v":7.89e-30,"d":"7.89E-30"},{"v":2.46e-28,"d":"2.46E-28"},"full_name=ATP-binding cassette A4. ATP binding cassette subfamily A4. member of ATH subfamily","AT1G67360","LDAP1",145.75,-2.1653,0.25111,-8.6229,{"v":6.53e-18,"d":"6.53E-18"},{"v":1.98e-16,"d":"1.98E-16"},"Rubber elongation factor protein (REF)."]
["AT2G13360","AGT",260.27,-1.2752,0.15505,-8.2247,1.96E-16,{"v":6.71e-15,"d":"6.71E-15"},"full_name=alanine:glyoxylate aminotransferase. alanine:glyoxylate aminotransferase. Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.","AT2G39210","PIC30",46.944,4.677,0.52883,8.844,{"v":9.24e-19,"d":"9.24E-19"},{"v":3.07e-17,"d":"3.07E-17"},"Major facilitator superfamily protein.","AT4G15390",null,329.29,1.6472,0.1766,9.3273,{"v":1.09e-20,"d":"1.09E-20"},{"v":3.5e-19,"d":"3.50E-19"},"HXXXD-type acyl-transferase family protein.","AT4G05110","ENT6",71.5,-4.9656,0.43789,-11.34,{"v":8.33e-30,"d":"8.33E-30"},{"v":2.59e-28,"d":"2.59E-28"},"full_name=equilibrative nucleoside transporter 6. equilibrative nucleoside transporter 6.","AT2G41500","LIS",479.37,1.1336,0.1315,8.6204,{"v":6.67e-18,"d":"6.67E-18"},2.02E-16,"full_name=LACHESIS. WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-like protein. Encodes LACHESIS (LIS), a protein with seven WD40 repeats. LIS is homologous to the yeast splicing factor PRP4 which is associated with the U4/U6 complex of the spliceosome. LIS is involved in a mechanism that prevents accessory cells from adopting gametic cell fate: lis mutant forms supernumerary egg cells."]
["AT2G15400","NRPE3B",87.81,-2.1186,0.25769,-8.2216,{"v":2.01e-16,"d":"2.01E-16"},6.87E-15,"DNA-directed RNA polymerase family protein. Non-catalytic subunit of Nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, At2g15430 can substitute for At2g15400 in the context of Pol V and encodes the equivalent subunit of Pol II and Pol IV.","AT5G46690","bHLH071",204.27,-2.0584,0.23312,-8.8296,1.05E-18,3.48E-17,"full_name=beta HLH protein 71. beta HLH protein 71.","AT1G69010","BIM2",165.79,1.767,0.18954,9.3228,1.13E-20,3.64E-19,"full_name=BES1-interacting Myc-like protein 2. BES1-interacting Myc-like protein 2. Encodes BES1-INTERACTING MYC-LIKE 2 (BIM2), a PAR1 (PHYTOCHROME RAPIDLY REGULATED 1)-interacting protein that positively modulates the shade avoidance syndrome in Arabidopsis seedlings.","AT2G38380",null,1178.2,-5.194,0.4587,-11.323,{"v":1.01e-29,"d":"1.01E-29"},3.13E-28,"Peroxidase superfamily protein.","AT3G53960",null,233.77,1.5207,0.17658,8.6121,{"v":7.17e-18,"d":"7.17E-18"},2.17E-16,"Major facilitator superfamily protein."]
["AT1G11070",null,72.87,-2.2682,0.27632,-8.2084,{"v":2.24e-16,"d":"2.24E-16"},{"v":7.65e-15,"d":"7.65E-15"},"hydroxyproline-rich glycoprotein family protein.","AT1G13960","WRKY4",178.69,1.5121,0.17145,8.8199,1.15E-18,{"v":3.79e-17,"d":"3.79E-17"},"full_name=WRKY DNA-binding protein 4. WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4).","AT3G42860",null,188.96,1.6998,0.1825,9.3145,{"v":1.23e-20,"d":"1.23E-20"},3.93E-19,"zinc knuckle (CCHC-type) family protein.","AT1G61800","GPT2",447.91,-6.4601,0.57057,-11.322,{"v":1.02e-29,"d":"1.02E-29"},3.16E-28,"full_name=glucose-6-phosphate/phosphate translocator 2. glucose-6-phosphate/phosphate translocator 2. glucose6-Phosphate/phosphate transporter 2. Expression is upregulated in the shoot of cax1/cax3 mutant.","AT1G20640","NLP4",260.89,-1.284,0.14912,-8.6103,{"v":7.29e-18,"d":"7.29E-18"},{"v":2.2E-16,"d":"2.20E-16"},"Plant regulator RWP-RK family protein."]
["AT2G25900","ATCTH",373.69,-1.2534,0.1527,-8.2079,{"v":2.25e-16,"d":"2.25E-16"},{"v":7.67e-15,"d":"7.67E-15"},"Zinc finger C-x8-C-x5-C-x3-H type family protein. Encodes a protein with two tandem-arrayed CCCH-type zinc fingers that binds RNA and is involved in RNA turnover.","AT4G33220","PME44",132.07,-1.9941,0.22634,-8.8104,{"v":1.25e-18,"d":"1.25E-18"},{"v":4.12e-17,"d":"4.12E-17"},"full_name=pectin methylesterase 44. pectin methylesterase 44.","AT3G23790","AAE16",445.56,1.2985,0.13968,9.2963,1.45E-20,{"v":4.65e-19,"d":"4.65E-19"},"full_name=acyl activating enzyme 16. AMP-dependent synthetase and ligase family protein.","AT5G48160","OBE2",714.12,1.1425,0.10102,11.309,1.18E-29,{"v":3.65e-28,"d":"3.65E-28"},"full_name=OBERON2. potyvirus VPg interacting protein (DUF1423). Encodes a nuclear PHD finger protein that is functionally redundant with OBE1 and plays an important role in the maintenance and/or establishment of the root and shoot apical meristems.","AT1G43160","RAP2.6",156.66,-1.5777,0.1833,-8.6071,{"v":7.49e-18,"d":"7.49E-18"},{"v":2.26e-16,"d":"2.26E-16"},"full_name=related to AP2 6. related to AP2 6. encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family (RAP2.6). The protein contains one AP2 domain. There are 7 members in this subfamily."]
["AT2G25450","GSL-OH",465.68,-1.1843,0.1443,-8.207,{"v":2.27e-16,"d":"2.27E-16"},{"v":7.71e-15,"d":"7.71E-15"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. encodes a protein whose sequence is similar to ACC oxidase","AT5G20635","AGG3",221.19,-1.4359,0.16302,-8.8082,1.27E-18,4.19E-17,"full_name=Arabidopsis G protein gamma subunit 3. guanine nucleotide-binding protein subunit gamma. Encodes an atypical heterotrimeric G-protein gamma-subunit involved in guard cell K+-channel regulation and morphological development.","AT3G13960","GRF5",184.59,-2.4235,0.26079,-9.2929,{"v":1.5e-20,"d":"1.50E-20"},{"v":4.8e-19,"d":"4.80E-19"},"full_name=growth-regulating factor 5. growth-regulating factor 5. Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.","AT1G17530","TIM23-1",542.3,1.2949,0.11455,11.305,1.24E-29,{"v":3.83e-28,"d":"3.83E-28"},"full_name=translocase of inner mitochondrial membrane 23. translocase of inner mitochondrial membrane 23. Encodes a translocase of inner mitochondrial membrane.","AT2G27050","EIL1",668.77,0.81649,0.09488,8.6056,{"v":7.59e-18,"d":"7.59E-18"},{"v":2.29e-16,"d":"2.29E-16"},"full_name=ETHYLENE-INSENSITIVE3-like 1. ETHYLENE-INSENSITIVE3-like 1. ethylene-insensitive3-like1 (EIL1)"]
["AT1G60810","ACLA-2",432.6,-1.1294,0.13767,-8.204,{"v":2.32e-16,"d":"2.32E-16"},7.89E-15,"full_name=ATP-citrate lyase A-2. ATP-citrate lyase A-2. One of the three genes encoding subunit A of the trimeric enzyme ATP Citrate lyase","AT3G09440",null,586.83,1.4718,0.16727,8.7992,1.38E-18,{"v":4.53e-17,"d":"4.53E-17"},"Heat shock protein 70 (Hsp 70) family protein.","AT2G25940","ALPHA-VPE",250.87,-1.9072,0.2053,-9.2897,1.55E-20,4.93E-19,"full_name=alpha-vacuolar processing enzyme. alpha-vacuolar processing enzyme. Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions.","AT1G72680","CAD1",2163.4,1.1635,0.10297,11.299,{"v":1.33e-29,"d":"1.33E-29"},{"v":4.09e-28,"d":"4.09E-28"},"full_name=cinnamyl-alcohol dehydrogenase. cinnamyl-alcohol dehydrogenase.","AT1G54870",null,111740,-0.5957,0.069269,-8.5998,{"v":7.99e-18,"d":"7.99E-18"},{"v":2.4E-16,"d":"2.40E-16"},"NAD(P)-binding Rossmann-fold superfamily protein. ChlADR is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on saturated and alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. The N-terminal region of this protein directs GFP to the chloroplast where where ChlADR likely helps to maintain the photosynthetic process by detoxifying reactive carbonyls formed during lipid peroxidation. In addition, this enzyme can also reduce cis-3-hexenal, a major plant volatile compound that contributes to green leaf odor, as well as methylglyoxal in vitro."]
["AT5G59220","HAI1",2876.6,-0.76732,0.093533,-8.2037,{"v":2.33e-16,"d":"2.33E-16"},{"v":7.9e-15,"d":"7.90E-15"},"full_name=highly ABA-induced PP2C gene 1. PP2C protein (Clade A protein phosphatases type 2C). Encodes a member of the PP2C family (Clade A protein phosphatases type 2C). Functions as a negative regulator of osmotic stress and ABA signaling.","AT2G43535",null,354.99,-1.5604,0.17738,-8.7969,1.41E-18,{"v":4.62e-17,"d":"4.62E-17"},"Scorpion toxin-like knottin superfamily protein. Encodes a defensin-like (DEFL) family protein.","AT3G04120","GAPC1",822.86,-1.0158,0.1094,-9.2856,{"v":1.61e-20,"d":"1.61E-20"},{"v":5.12e-19,"d":"5.12E-19"},"full_name=glyceraldehyde-3-phosphate dehydrogenase C subunit 1. glyceraldehyde-3-phosphate dehydrogenase C subunit 1. encodes cytosolic GADPH (C subunit) involved in the glycolytic pathway but also interacts with H2O2 potentially placing it in a signalling cascade induced by ROS.","AT3G29810","COBL2",160.41,-2.4486,0.21693,-11.287,{"v":1.52e-29,"d":"1.52E-29"},{"v":4.67e-28,"d":"4.67E-28"},"full_name=COBRA-like protein 2 precursor. COBRA-like protein 2 precursor.","AT1G30070",null,2025.9,-1.2922,0.15035,-8.5944,{"v":8.37e-18,"d":"8.37E-18"},{"v":2.51e-16,"d":"2.51E-16"},"SGS domain-containing protein."]
["AT5G56540","AGP14",2297.3,1.2333,0.15051,8.194,{"v":2.53e-16,"d":"2.53E-16"},{"v":8.55e-15,"d":"8.55E-15"},"full_name=arabinogalactan protein 14. arabinogalactan protein 14. Encodes arabinogalactan protein (AGP14). Mutants exhibit longer root hairs.","AT5G02160","FIP",46.321,-4.7126,0.53615,-8.7897,{"v":1.5e-18,"d":"1.50E-18"},{"v":4.91e-17,"d":"4.91E-17"},"transmembrane protein.","AT5G04500","GINT1",1582.1,1.4661,0.15793,9.2832,1.65E-20,{"v":5.23e-19,"d":"5.23E-19"},"glycosyltransferase family protein 47. a member of the Glycosyltransferase Family 64 (according to CAZy Database)","AT4G32870",null,69.295,-4.3443,0.38502,-11.283,{"v":1.59e-29,"d":"1.59E-29"},{"v":4.87e-28,"d":"4.87E-28"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein.","AT1G49970","CLPR1",1665,-0.59637,0.069416,-8.5913,{"v":8.6e-18,"d":"8.60E-18"},{"v":2.57e-16,"d":"2.57E-16"},"full_name=CLP protease proteolytic subunit 1. CLP protease proteolytic subunit 1. Encodes a ClpP-related sequence. Though similar to ClpP proteins, this does not contains the highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001)."]
["AT3G27440","UKL5",59.514,2.4873,0.30397,8.1827,{"v":2.78e-16,"d":"2.78E-16"},{"v":9.36e-15,"d":"9.36E-15"},"full_name=uridine kinase-like 5. uridine kinase-like 5. One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.","AT2G21660","GRP7",3209.5,-1.3867,0.1578,-8.7878,1.52E-18,{"v":4.99e-17,"d":"4.99E-17"},"full_name=GLYCINE-RICH RNA-BINDING PROTEIN 7. cold, circadian rhythm, and rna binding 2. Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).","AT5G66190","FNR1",53.257,-3.9935,0.43032,-9.2804,{"v":1.69e-20,"d":"1.69E-20"},{"v":5.35e-19,"d":"5.35E-19"},"full_name=ferredoxin-NADP(+)-oxidoreductase 1. ferredoxin-NADP[+]-oxidoreductase 1. Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the thylakoid. The affinity of this enzyme for ferredoxin is slightly, but significantly, higher than AtLFNR2, an isoform of the same enzyme. AtLFNR1 forms a heterodimer with AtFNR2 and is also a prerequisite to attach AtFNR2 to the thylakoid membrane.","AT2G14060",null,137.62,-2.3262,0.20681,-11.248,{"v":2.36e-29,"d":"2.36E-29"},{"v":7.24e-28,"d":"7.24E-28"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. encodes a protein whose sequence is similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (GI:6002712)(Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (BAMT)(GI:9789277)(Antirrhinum majus)","AT2G41230","ORS1",51.117,-3.2223,0.37582,-8.5741,{"v":9.98e-18,"d":"9.98E-18"},{"v":2.98e-16,"d":"2.98E-16"},"full_name=ORGAN SIZE RELATED 1. ORGAN SIZE-like protein. Encodes an ER-localized plant hormone-responsive gene and appears to act redundantly with ARGOS and ARL during organ growth."]
["AT3G23180",null,151.18,1.8687,0.22838,8.1826,{"v":2.78e-16,"d":"2.78E-16"},{"v":9.36e-15,"d":"9.36E-15"},"HR-like lesion-inducing protein-like protein.","AT5G64620","C/VIF2",73.121,-2.494,0.28389,-8.7851,1.56E-18,{"v":5.1e-17,"d":"5.10E-17"},"full_name=cell wall / vacuolar inhibitor of fructosidase 2. cell wall / vacuolar inhibitor of fructosidase 2. Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling.","AT4G11360","RHA1B",81.061,2.5467,0.27446,9.2789,{"v":1.71e-20,"d":"1.71E-20"},{"v":5.42e-19,"d":"5.42E-19"},"full_name=RING-H2 finger A1B. RING-H2 finger A1B. Encodes a putative RING-H2 finger protein RHA1b.","AT1G03103","LTPG19",111.66,-4.4538,0.39621,-11.241,{"v":2.56e-29,"d":"2.56E-29"},7.83E-28,"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT5G39520","CSAP",615.98,-1.1177,0.13049,-8.5661,1.07E-17,{"v":3.19e-16,"d":"3.19E-16"},"hypothetical protein (DUF1997)."]
["AT3G53260","PAL2",1005.3,-1.0701,0.13087,-8.1773,{"v":2.9e-16,"d":"2.90E-16"},{"v":9.76e-15,"d":"9.76E-15"},"full_name=phenylalanine ammonia-lyase 2. phenylalanine ammonia-lyase 2. Encodes phenylalanine lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).","AT4G18425","DMP4",1039.1,1.1844,0.13489,8.7803,1.63E-18,{"v":5.31e-17,"d":"5.31E-17"},"transmembrane protein, putative (DUF679).","AT1G76160","sks5",404.53,-1.7153,0.18499,-9.2728,{"v":1.81e-20,"d":"1.81E-20"},{"v":5.73e-19,"d":"5.73E-19"},"full_name=SKU5 similar 5. SKU5 similar 5.","AT4G02510","TOC159",2895.2,1.145,0.10213,11.211,{"v":3.6e-29,"d":"3.60E-29"},{"v":1.1e-27,"d":"1.10E-27"},"full_name=translocon at the outer envelope membrane of chloroplasts 159. translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly.","AT1G01170",null,1378.5,-0.73804,0.08621,-8.561,1.12E-17,{"v":3.33e-16,"d":"3.33E-16"},"ozone-responsive stress-like protein (DUF1138)."]
["AT2G37290",null,241.3,1.2711,0.15592,8.1519,3.58E-16,{"v":1.2e-14,"d":"1.20E-14"},"Ypt/Rab-GAP domain of gyp1p superfamily protein.","AT5G65470",null,512.7,1.1365,0.12963,8.7672,{"v":1.83e-18,"d":"1.83E-18"},{"v":5.96e-17,"d":"5.96E-17"},"O-fucosyltransferase family protein.","AT4G33510","DHS2",868.04,1.1561,0.12469,9.2716,1.83E-20,{"v":5.78e-19,"d":"5.78E-19"},"full_name=3-deoxy-d-arabino-heptulosonate 7-phosphate synthase. 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase. Enzyme catalyzing the first committed step in aromatic amino acid biosynthesis","AT3G11430","GPAT5",78.28,-5.1991,0.46421,-11.2,{"v":4.08e-29,"d":"4.08E-29"},1.24E-27,"full_name=GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 5. glycerol-3-phosphate acyltransferase 5. sn-glycerol-3-phosphate 2-O-acyltransferas, involved in the biosynthesis of suberin polyester.","AT4G18280",null,512.82,-1.0233,0.11962,-8.5548,1.18E-17,{"v":3.51e-16,"d":"3.51E-16"},"glycine-rich cell wall protein-like protein."]
["AT3G52780","PAP20",252.43,1.2764,0.1566,8.1508,{"v":3.62e-16,"d":"3.62E-16"},1.21E-14,"Purple acid phosphatases superfamily protein.","AT4G25080","CHLM",72.407,-2.537,0.28944,-8.7652,{"v":1.86e-18,"d":"1.86E-18"},{"v":6.05e-17,"d":"6.05E-17"},"full_name=magnesium-protoporphyrin IX methyltransferase. magnesium-protoporphyrin IX methyltransferase. Encodes a protein with methyltransferase activity responsible for the methylation of magnesium protoporphyrin IX. Mutants defective in this gene are affected in chlorophyll biosynthesis and show a reduction in the accumulation of a number of major thylakoid-associated proteins including components of PSI (LHCI), PSII (LHCII, D1, CP43) and the cytochrome b6f complex (Cytf). By contrast, no significant changes were detected for the proteins of the stroma and the chloroplast envelope.","AT3G12670","emb2742",3567.6,-1.1327,0.12221,-9.2677,{"v":1.9e-20,"d":"1.90E-20"},{"v":5.98e-19,"d":"5.98E-19"},"full_name=embryo defective 2742. CTP synthase family protein.","AT2G33740","CUTA",399.45,1.3614,0.12186,11.172,{"v":5.61e-29,"d":"5.61E-29"},{"v":1.71e-27,"d":"1.71E-27"},"Nitrogen regulatory PII-like, alpha/beta. encodes a copper binding protein that forms tetramers in vitro. Gene is expressed in all tissues examined and protein is localized to the chloroplast.","AT4G13520","SMAP1",592.58,-1.0422,0.12193,-8.5476,{"v":1.26e-17,"d":"1.26E-17"},3.73E-16,"full_name=small acidic protein 1. small acidic protein 1. Encodes a small acid protein (SMAP1) that mediates responses Arabidopsis root to the synthetic auxin 2,4-Dichlorophenoxyacetic acid."]
["AT4G28790",null,110.83,-1.8329,0.22505,-8.1446,{"v":3.8e-16,"d":"3.80E-16"},1.27E-14,"basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT5G13790","AGL15",778.06,-0.90014,0.10274,-8.7609,{"v":1.94e-18,"d":"1.94E-18"},{"v":6.28e-17,"d":"6.28E-17"},"full_name=AGAMOUS-like 15. AGAMOUS-like 15. AGL15 (AGAMOUS-Like 15) is a member of the MADS domain family of regulatory factors. Although AGL15 is preferentially expressed during embryogenesis, AGL15 is also expressed in leaf primordia, shoot apical meristems and young floral buds, suggesting that AGL15 may play a role during post-germinative development. Transgenic plants that ectopically express AGL15 show delays in the transition to flowering, perianth abscission and senescence and fruit and seed maturation. Role in embryogenesis and gibberellic acid catabolism. Targets B3 domain transcription factors that are key regulators of embryogenesis.","AT4G39900",null,96.678,-2.9173,0.315,-9.2612,2.02E-20,{"v":6.35e-19,"d":"6.35E-19"},"adenine deaminase.","AT4G16660","HSP70",180.37,-1.9953,0.17876,-11.162,{"v":6.25e-29,"d":"6.25E-29"},{"v":1.9E-27,"d":"1.90E-27"},"heat shock protein 70 (Hsp 70) family protein.","AT3G61040","CYP76C7",1534.4,-0.8847,0.10354,-8.5446,{"v":1.29e-17,"d":"1.29E-17"},{"v":3.82e-16,"d":"3.82E-16"},"full_name=cytochrome P450, family 76, subfamily C, polypeptide 7. cytochrome P450, family 76, subfamily C, polypeptide 7. encodes a protein with cytochrome P450 domain"]
["AT5G50240","PIMT2",561.48,1.1662,0.14325,8.1409,{"v":3.92e-16,"d":"3.92E-16"},{"v":1.31e-14,"d":"1.31E-14"},"full_name=protein-l-isoaspartate methyltransferase 2. protein-l-isoaspartate methyltransferase 2. L-isoaspartyl methyltransferase 2 (PIMT2)gene, alternatively spliced.","AT1G21090",null,103.58,-2.1289,0.24316,-8.7551,{"v":2.04e-18,"d":"2.04E-18"},{"v":6.59e-17,"d":"6.59E-17"},"Cupredoxin superfamily protein.","AT5G64210","AOX2",74.33,2.709,0.29263,9.2576,{"v":2.09e-20,"d":"2.09E-20"},{"v":6.56e-19,"d":"6.56E-19"},"full_name=alternative oxidase 2. alternative oxidase 2. encodes an isoform of alternative oxidase, which is expressed in rosettes, stems, and roots. Transcript accumulates in dry seeds and decreased upon germination and is not affected by actinomycin A. Protein is localized to mitochondria.","AT5G54840","SGP1",77.792,-4.2457,0.38094,-11.145,{"v":7.56e-29,"d":"7.56E-29"},2.29E-27,"Ras-related small GTP-binding family protein. Monomeric G protein. Expressed in the root quiescent center, flowers, and leaf guard cells and hydathodes.","AT5G47430",null,879.69,0.71722,0.084081,8.5301,{"v":1.46e-17,"d":"1.46E-17"},{"v":4.32e-16,"d":"4.32E-16"},"DWNN domain, a CCHC-type zinc finger."]
["AT4G24190","SHD",1808.2,-1.0304,0.12665,-8.1361,{"v":4.08e-16,"d":"4.08E-16"},1.36E-14,"full_name=SHEPHERD. Chaperone protein htpG family protein. encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.","AT2G24230",null,422.02,-1.1387,0.1301,-8.7527,{"v":2.08e-18,"d":"2.08E-18"},6.72E-17,"Leucine-rich repeat protein kinase family protein.","AT1G65930","cICDH",724.37,-1.3332,0.14411,-9.2508,2.23E-20,{"v":6.97e-19,"d":"6.97E-19"},"full_name=cytosolic NADP+-dependent isocitrate dehydrogenase. cytosolic NADP+-dependent isocitrate dehydrogenase. Encodes a NADP+-isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses.","AT1G05560","UGT75B1",108.22,2.8843,0.25881,11.144,{"v":7.64e-29,"d":"7.64E-29"},{"v":2.31e-27,"d":"2.31E-27"},"full_name=UDP-glucosyltransferase 75B1. UDP-glucosyltransferase 75B1. A UDP-glucose transferase localized in the phragmoplast. It has been co-purified with the callose synthase complex and may transfer UDP-glucose from sucrose synthase to the callose synthase and thus help form a substrate channel for the synthesis of callose at the forming cell plate. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. UGT1 encodes a protein with glucosyltransferase activity with high sequence homology to UGT2 (AT1G05530). It belongs to an UGT subfamily that binds UDP-glucose but not UDP-glucuronate, UDP-galactose, or UDP-rhamnose as the glycosyl donor. UGT1 was shown to be able to use abscisic acid as glycosylation substrate in the presence of UDP-glucose. UGT1/UGT75B1 catalyzes the formation of the p-aminobenzoate-glucose ester in vitro and in vivo. It appears to be the enzyme predominantly responsible for pABA-Glc formation in Arabidopsis based on assays in leaves, flowers, and siliques.","AT5G61270","PIF7",125.91,-1.8908,0.2218,-8.5247,1.53E-17,{"v":4.52e-16,"d":"4.52E-16"},"full_name=phytochrome-interacting factor7. phytochrome-interacting factor7. Basic helix-loop-helix (bHLH) phytochrome interacting factor. Interacts specifically with the far-red light%E2%80%93absorbing Pfr form of phyB through a conserved domain called the active phyB binding motif. Upon light exposure, PIF7 rapidly migrates to intranuclear speckles, where it colocalizes with phyB. Role as negative regulator of phyB-mediated seedling deetiolation."]
["AT1G71690",null,81.812,-2.2587,0.27776,-8.1318,{"v":4.23e-16,"d":"4.23E-16"},1.41E-14,"glucuronoxylan 4-O-methyltransferase-like protein (DUF579).","AT1G30840","PUP4",75.99,-2.4767,0.28315,-8.7468,{"v":2.19e-18,"d":"2.19E-18"},{"v":7.07e-17,"d":"7.07E-17"},"full_name=purine permease 4. purine permease 4. Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.","AT2G21160",null,483.42,-1.2359,0.1338,-9.2369,{"v":2.54e-20,"d":"2.54E-20"},{"v":7.93e-19,"d":"7.93E-19"},"Translocon-associated protein (TRAP), alpha subunit.","AT5G54670","ATK3",108.99,-2.7392,0.24582,-11.143,{"v":7.76e-29,"d":"7.76E-29"},{"v":2.34e-27,"d":"2.34E-27"},"full_name=kinesin 3. kinesin 3. Encodes a truncated KatC polypeptide (KatC(207-754)), which includes the carboxyl-terminal region of KatC. This was expressed in Escherichia coli and was shown to possess microtubule-stimulated ATPase activity.","AT1G70620",null,955.88,-1.0823,0.12698,-8.5234,{"v":1.55e-17,"d":"1.55E-17"},{"v":4.56e-16,"d":"4.56E-16"},"cyclin-like protein."]
["AT3G23890","TOPII",43.166,-5.3451,0.65831,-8.1195,{"v":4.68e-16,"d":"4.68E-16"},1.55E-14,"full_name=topoisomerase II. topoisomerase II. Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues.","AT5G25180","CYP71B14",72.028,2.916,0.33352,8.7432,{"v":2.27e-18,"d":"2.27E-18"},{"v":7.28e-17,"d":"7.28E-17"},"full_name=cytochrome P450, family 71, subfamily B, polypeptide 14. cytochrome P450, family 71, subfamily B, polypeptide 14. putative cytochrome P450","AT5G02230",null,705.96,-2.0575,0.22289,-9.2309,{"v":2.68e-20,"d":"2.68E-20"},{"v":8.35e-19,"d":"8.35E-19"},"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein.","AT2G43970","LARP6b",3255.2,1.1609,0.10443,11.116,1.05E-28,{"v":3.16e-27,"d":"3.16E-27"},"full_name=La related protein 6b. RNA-binding protein.","AT5G63790","NAC102",352.96,1.2044,0.14143,8.5156,{"v":1.66e-17,"d":"1.66E-17"},{"v":4.87e-16,"d":"4.87E-16"},"full_name=NAC domain containing protein 102. NAC domain containing protein 102. Encodes a member of the NAC family of transcription factors. ANAC102 appears to have a role in mediating response to low oxygen stress (hypoxia) in germinating seedlings."]
["AT5G51950",null,45.94,-3.1535,0.38892,-8.1082,{"v":5.14e-16,"d":"5.14E-16"},{"v":1.7E-14,"d":"1.70E-14"},"Glucose-methanol-choline (GMC) oxidoreductase family protein.","AT3G14980","ROS4",428.54,-1.0866,0.12445,-8.7314,{"v":2.52e-18,"d":"2.52E-18"},{"v":8.08e-17,"d":"8.08E-17"},"full_name=REPRESSOR OF SILENCING 4. Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein. IDM1 is a histone H3 acetyltransferase that is capable of recognizing methylated DNA through its MBD domain and recognizing unmethylated histone H3K4 through its PHD domain. It negatively regulates DNA demethylation, preventing DNA hypermethylation of highly homologous multicopy genes and other repetitive sequences.","AT4G13180",null,322.64,1.5582,0.1688,9.2309,{"v":2.68e-20,"d":"2.68E-20"},{"v":8.35e-19,"d":"8.35E-19"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT5G17270",null,463.14,1.4718,0.13246,11.111,{"v":1.1E-28,"d":"1.10E-28"},{"v":3.32e-27,"d":"3.32E-27"},"Protein prenylyltransferase superfamily protein.","AT3G62980","TIR1",507.84,1.1597,0.13626,8.5106,{"v":1.73e-17,"d":"1.73E-17"},{"v":5.07e-16,"d":"5.07E-16"},"full_name=TRANSPORT INHIBITOR RESPONSE 1. F-box/RNI-like superfamily protein. Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation. Mutations in TIR1 block auxin stimulation of flavonoid synthesis."]
["AT2G34590",null,1488.3,-0.74619,0.092267,-8.0873,{"v":6.1e-16,"d":"6.10E-16"},{"v":2.02e-14,"d":"2.02E-14"},"Transketolase family protein.","AT3G47790","ABCA8",163.74,2.5397,0.29092,8.73,{"v":2.55e-18,"d":"2.55E-18"},{"v":8.16e-17,"d":"8.16E-17"},"full_name=ATP-binding cassette A8. ABC2 homolog 7. member of ATH subfamily","AT3G21190","MSR1",91.995,-2.3024,0.24977,-9.2179,{"v":3.03e-20,"d":"3.03E-20"},{"v":9.41e-19,"d":"9.41E-19"},"full_name=Mannan Synthesis Related 1. O-fucosyltransferase family protein.","AT2G27240",null,112.72,-4.2593,0.38359,-11.104,{"v":1.2e-28,"d":"1.20E-28"},{"v":3.6e-27,"d":"3.60E-27"},"aluminum activated malate transporter family protein.","AT5G42980","TRX3",3916.7,-0.82072,0.096486,-8.5061,{"v":1.8E-17,"d":"1.80E-17"},{"v":5.26e-16,"d":"5.26E-16"},"full_name=thioredoxin 3. thioredoxin 3. encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells."]
["AT5G02230",null,1676.4,0.92838,0.11481,8.0864,{"v":6.14e-16,"d":"6.14E-16"},{"v":2.03e-14,"d":"2.03E-14"},"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein.","AT5G42780","HB27",117.48,-2.2098,0.25319,-8.7276,{"v":2.6E-18,"d":"2.60E-18"},{"v":8.32e-17,"d":"8.32E-17"},"full_name=homeobox protein 27. homeobox protein 27.","AT3G52920",null,523.79,-1.3608,0.14767,-9.215,{"v":3.11e-20,"d":"3.11E-20"},{"v":9.65e-19,"d":"9.65E-19"},"transcriptional activator (DUF662).","AT5G35525",null,232.22,-2.0015,0.18026,-11.104,{"v":1.2e-28,"d":"1.20E-28"},{"v":3.6e-27,"d":"3.60E-27"},"PLAC8 family protein.","AT3G10020",null,13678,-0.7973,0.093838,-8.4966,{"v":1.95e-17,"d":"1.95E-17"},{"v":5.7e-16,"d":"5.70E-16"},"plant/protein."]
["AT4G12720","NUDT7",156.49,-1.9365,0.2397,-8.0786,{"v":6.55e-16,"d":"6.55E-16"},{"v":2.16e-14,"d":"2.16E-14"},"MutT/nudix family protein. Encodes a protein with ADP-ribose hydrolase activity. Negatively regulates EDS1-conditioned plant defense and programmed cell death.","AT4G27170","SESA4",192530,-0.79647,0.091293,-8.7244,2.68E-18,{"v":8.54e-17,"d":"8.54E-17"},"full_name=seed storage albumin 4. seed storage albumin 4.","AT2G37970","SOUL-1",1543.8,1.4692,0.15948,9.2123,3.19E-20,{"v":9.88e-19,"d":"9.88E-19"},"SOUL heme-binding family protein.","AT5G48100","TT10",1339.7,-4.6606,0.41973,-11.104,{"v":1.2e-28,"d":"1.20E-28"},{"v":3.6e-27,"d":"3.60E-27"},"full_name=TRANSPARENT TESTA 10. Laccase/Diphenol oxidase family protein. Encodes a protein that is similar to laccase-like polyphenol oxidases. Involved in lignin and flavonoids biosynthesis. It has four conserved copper binding domains. Expressed in developing testa, where it colocalizes with the flavonoid end products proanthocyanidins and flavonols. Mutant plants exhibited a delay in developmentally determined browning of the testa, characterized by the pale brown color of seed coat. The tt10 mutant seeds accumulate more epicatechin monomers and more soluble proanthocyanidins than wild-type seeds. Flavonol composition was also affected in tt10 seeds, which exhibited a higher ratio of quercetin rhamnoside monomers versus dimers than wild-type seeds.","AT4G32410","CESA1",448.37,0.93849,0.11054,8.4899,{"v":2.07e-17,"d":"2.07E-17"},{"v":6.03e-16,"d":"6.03E-16"},"full_name=cellulose synthase 1. cellulose synthase 1. Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening."]
["AT1G74670","GASA6",626.74,0.90723,0.11234,8.0757,{"v":6.71e-16,"d":"6.71E-16"},{"v":2.21e-14,"d":"2.21E-14"},"full_name=GA-stimulated Arabidopsis 6. Gibberellin-regulated family protein.","AT3G14420","GOX1",45.406,-3.7846,0.43386,-8.7231,{"v":2.71e-18,"d":"2.71E-18"},8.62E-17,"full_name=glycolate oxidase 1. Aldolase-type TIM barrel family protein. Encodes a glycolate oxidase that modulates reactive oxygen species-mediated signal transduction during nonhost resistance.","AT3G07560","PEX13",983.67,1.0527,0.11443,9.1993,{"v":3.6e-20,"d":"3.60E-20"},{"v":1.11e-18,"d":"1.11E-18"},"full_name=peroxin 13. peroxin 13. Encodes peroxin 13 (PEX13) involved in protein transport into peroxisomes, for example, peroxisomal import of nitric oxide synthase.","AT1G16770",null,2235.8,-0.96866,0.087255,-11.101,{"v":1.23e-28,"d":"1.23E-28"},3.69E-27,"hypothetical protein.","AT5G64510","TIN1",181.09,-1.509,0.17775,-8.4896,{"v":2.07e-17,"d":"2.07E-17"},{"v":6.03e-16,"d":"6.03E-16"},"full_name=tunicamycin induced 1. tunicamycin induced protein. Encodes Tunicamycin Induced 1(TIN1), a plant-speci%1Ec ER stress-inducible protein. TIN1 mutation affects pollen surface morphology. Transcriptionally induced by treatment with the N-linked glyclsylation inhibitor tunicamycin."]
["AT1G35190",null,2271.7,0.7327,0.090779,8.0713,{"v":6.96e-16,"d":"6.96E-16"},{"v":2.28e-14,"d":"2.28E-14"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT2G37660",null,52.534,-3.3405,0.38299,-8.7222,{"v":2.73e-18,"d":"2.73E-18"},8.68E-17,"NAD(P)-binding Rossmann-fold superfamily protein.","AT3G05510",null,652.75,1.1961,0.13022,9.1852,{"v":4.11e-20,"d":"4.11E-20"},1.27E-18,"Phospholipid/glycerol acyltransferase family protein.","AT5G27120",null,524.63,1.4935,0.13478,11.081,1.55E-28,{"v":4.62e-27,"d":"4.62E-27"},"NOP56-like pre RNA processing ribonucleoprotein. SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; has similarity to MAR binding NOP58 protein","AT5G19820","emb2734",646.97,0.89202,0.1051,8.4875,2.11E-17,6.13E-16,"full_name=embryo defective 2734. ARM repeat superfamily protein."]
["AT4G35160","ASMT",321.88,1.2808,0.15872,8.0698,7.04E-16,{"v":2.31e-14,"d":"2.31E-14"},"O-methyltransferase family protein.","AT5G35525",null,229.93,1.3969,0.16058,8.6987,{"v":3.36e-18,"d":"3.36E-18"},1.07E-16,"PLAC8 family protein.","AT2G19320",null,552.85,1.5922,0.17335,9.1848,{"v":4.12e-20,"d":"4.12E-20"},1.27E-18,"hypothetical protein.","AT1G12010","ACO3",1335,-5.0453,0.45539,-11.079,1.58E-28,{"v":4.71e-27,"d":"4.71E-27"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. Encodes a protein that appears to have 1-amino-cyclopropane-1-carboxylic acid oxidase activity based on mutant analyses.","AT5G59910","HTB4",1049.2,-0.68548,0.080781,-8.4857,2.14E-17,{"v":6.22e-16,"d":"6.22E-16"},"Histone superfamily protein."]
["AT3G06880",null,41.78,-5.0608,0.62767,-8.0628,{"v":7.46e-16,"d":"7.46E-16"},{"v":2.44e-14,"d":"2.44E-14"},"Transducin/WD40 repeat-like superfamily protein.","AT1G01620","PIP1C",100.29,-2.0671,0.23789,-8.6893,{"v":3.65e-18,"d":"3.65E-18"},{"v":1.16e-16,"d":"1.16E-16"},"full_name=plasma membrane intrinsic protein 1C. plasma membrane intrinsic protein 1C. a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development.","AT2G38270","CXIP2",334.52,1.4497,0.15793,9.1791,4.35E-20,1.34E-18,"full_name=CAX-interacting protein 2. CAX-interacting protein 2. Encodes protein homologous to CXIP1. CXIP1 is a PICOT domain containing protein interacts with CAX1, a high capacity calcium transporter. However, CXP2 does not interact with CAX1 and only moderately activates another calcium transporter CAX4.","AT2G44450","BGLU15",77.848,-5.3001,0.47856,-11.075,1.66E-28,{"v":4.92e-27,"d":"4.92E-27"},"full_name=beta glucosidase 15. beta glucosidase 15.","AT4G36600",null,15964,-0.9616,0.11332,-8.4855,{"v":2.15e-17,"d":"2.15E-17"},{"v":6.22e-16,"d":"6.22E-16"},"Late embryogenesis abundant (LEA) protein."]
["AT4G16980",null,44.496,-4.2271,0.52444,-8.0603,{"v":7.61e-16,"d":"7.61E-16"},{"v":2.48e-14,"d":"2.48E-14"},"arabinogalactan-protein family.","AT4G26590","OPT5",1096.6,0.88335,0.10174,8.6828,{"v":3.86e-18,"d":"3.86E-18"},{"v":1.22e-16,"d":"1.22E-16"},"full_name=oligopeptide transporter 5. oligopeptide transporter 5. oligopeptide transporter","AT5G20860",null,215.46,-2.1419,0.23337,-9.178,{"v":4.39e-20,"d":"4.39E-20"},{"v":1.35e-18,"d":"1.35E-18"},"Plant invertase/pectin methylesterase inhibitor superfamily.","AT1G74020","SS2",206.67,-2.1167,0.19125,-11.068,{"v":1.8e-28,"d":"1.80E-28"},{"v":5.34e-27,"d":"5.34E-27"},"full_name=strictosidine synthase 2. strictosidine synthase 2. Encodes AtSS-2 strictosidine synthase.","AT1G12130","FMOGS-OX6",1330,-0.70257,0.082855,-8.4795,2.26E-17,{"v":6.54e-16,"d":"6.54E-16"},"Flavin-binding monooxygenase family protein."]
["AT2G39470","PnsL1",67.678,-2.4381,0.30287,-8.05,{"v":8.28e-16,"d":"8.28E-16"},{"v":2.7e-14,"d":"2.70E-14"},"full_name=Photosynthetic NDH subcomplex L 1. PsbP-like protein 2.","AT1G08170",null,75.968,2.6895,0.31017,8.6711,{"v":4.28e-18,"d":"4.28E-18"},1.35E-16,"Histone superfamily protein.","AT3G58790","GAUT15",193.09,-1.7944,0.19569,-9.1696,4.75E-20,1.45E-18,"full_name=galacturonosyltransferase 15. galacturonosyltransferase 15. Encodes a protein with putative galacturonosyltransferase activity.","AT1G17060","CYP72C1",126.97,-2.9934,0.27057,-11.063,{"v":1.89e-28,"d":"1.89E-28"},{"v":5.59e-27,"d":"5.59E-27"},"full_name=cytochrome p450 72c1. cytochrome p450 72c1. Encodes a protein with similarity to other cytochrome P450's and is a homolog of BAS1. Over expression causes a dwarf phenotype resembling brassinolide resistant mutants. Double mutant analysis of sob7/bas1 loss of function mutants suggests these genes have redundant functions in light responsiveness. SOB7 may function in metabolizing brassinolides. Expressed in leaf, root, stem and silique but expression highest in flower and cauline leaves. Dominant overexpressing plants have dwarf phenotype, short siliques/seeds, rounded dark green leaves and short hypocotyls in light and dark. Loss of function alleles result in plants with long hypocotyls.","AT1G01320","REC1",695.55,0.80447,0.094911,8.476,{"v":2.33e-17,"d":"2.33E-17"},{"v":6.72e-16,"d":"6.72E-16"},"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT4G28250","EXPB3",42.223,-3.4862,0.43324,-8.0468,{"v":8.5e-16,"d":"8.50E-16"},2.76E-14,"full_name=expansin B3. expansin B3. putative beta-expansin/allergen protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","AT5G50770","HSD6",2015.2,-0.85976,0.099273,-8.6605,{"v":4.7e-18,"d":"4.70E-18"},{"v":1.48e-16,"d":"1.48E-16"},"full_name=hydroxysteroid dehydrogenase 6. hydroxysteroid dehydrogenase 6. Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.","AT1G74510",null,151.7,-1.9331,0.21088,-9.1666,{"v":4.88e-20,"d":"4.88E-20"},1.49E-18,"Galactose oxidase/kelch repeat superfamily protein.","AT2G32190","ATHCYSTM4",263.37,-3.0606,0.27684,-11.056,{"v":2.06e-28,"d":"2.06E-28"},{"v":6.09e-27,"d":"6.09E-27"},"cysteine-rich/transmembrane domain A-like protein.","AT3G09370","MYB3R-3",224.26,1.3487,0.15913,8.4757,{"v":2.34e-17,"d":"2.34E-17"},{"v":6.73e-16,"d":"6.73E-16"},"full_name=myb domain protein 3r-3. myb domain protein 3r-3. putative c-myb-like transcription factor (MYB3R3) mRNA,"]
["AT5G55730","FLA1",1009.7,-1.2937,0.16088,-8.0416,8.86E-16,{"v":2.88e-14,"d":"2.88E-14"},"full_name=FASCICLIN-like arabinogalactan 1. FASCICLIN-like arabinogalactan 1. Encodes fasciclin-like arabinogalactan-protein 1 (Fla1). fla1 mutants show defects in shoot regeneration.","AT2G21250",null,142.05,-1.7316,0.20022,-8.6484,5.22E-18,1.64E-16,"NAD(P)-linked oxidoreductase superfamily protein.","AT3G02730","TRXF1",135.47,-2.1753,0.23795,-9.1419,{"v":6.14e-20,"d":"6.14E-20"},{"v":1.87e-18,"d":"1.87E-18"},"full_name=thioredoxin F-type 1. thioredoxin F-type 1.","AT1G05890","ARI5",1000.3,0.96171,0.087022,11.051,{"v":2.16e-28,"d":"2.16E-28"},{"v":6.37e-27,"d":"6.37E-27"},"full_name=ARIADNE 5. RING/U-box superfamily protein.","AT1G70790","CAR9",334.54,-1.0488,0.12393,-8.4629,{"v":2.61e-17,"d":"2.61E-17"},{"v":7.5e-16,"d":"7.50E-16"},"Calcium-dependent lipid-binding (CaLB domain) family protein."]
["AT5G08380","AGAL1",208.57,-1.3849,0.1724,-8.033,{"v":9.52e-16,"d":"9.52E-16"},{"v":3.08e-14,"d":"3.08E-14"},"full_name=alpha-galactosidase 1. alpha-galactosidase 1.","AT3G01680","SEOR1",49.202,-3.4638,0.40075,-8.6433,{"v":5.46e-18,"d":"5.46E-18"},{"v":1.72e-16,"d":"1.72E-16"},"full_name=Sieve-Element-Occlusion-Related 1. sieve element occlusion amino-terminus protein. Encodes a protein localized to phloem filaments that is required for phloem filament formation.","AT2G43880",null,119.82,-2.5099,0.27479,-9.1338,{"v":6.62e-20,"d":"6.62E-20"},{"v":2.01e-18,"d":"2.01E-18"},"Pectin lyase-like superfamily protein.","AT1G05320","PICL",79.976,-5.034,0.45556,-11.05,{"v":2.19e-28,"d":"2.19E-28"},{"v":6.44e-27,"d":"6.44E-27"},"myosin heavy chain, embryonic smooth protein.","AT5G18100","CSD3",716.79,-0.78647,0.092988,-8.4578,2.72E-17,{"v":7.81e-16,"d":"7.81E-16"},"full_name=copper/zinc superoxide dismutase 3. copper/zinc superoxide dismutase 3. A putative peroxisomal CuZnSOD inducible by a high-light pulse."]
["AT2G26740","SEH",564.53,0.96067,0.11962,8.0309,{"v":9.68e-16,"d":"9.68E-16"},{"v":3.13e-14,"d":"3.13E-14"},"full_name=soluble epoxide hydrolase. soluble epoxide hydrolase. Encodes a soluble epoxide hydrolase whose expression is induced by auxin and water stress.","AT3G19170","PREP1",1389.8,0.87916,0.10191,8.6268,{"v":6.31e-18,"d":"6.31E-18"},{"v":1.98e-16,"d":"1.98E-16"},"full_name=presequence protease 1. presequence protease 1. Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed only in siliques and flowers","AT5G40340","PDP3",893.94,1.4227,0.1559,9.1254,{"v":7.15e-20,"d":"7.15E-20"},2.17E-18,"Tudor/PWWP/MBT superfamily protein.","AT3G17390","MTO3",454.24,-1.252,0.11344,-11.036,{"v":2.56e-28,"d":"2.56E-28"},{"v":7.51e-27,"d":"7.51E-27"},"full_name=METHIONINE OVER-ACCUMULATOR 3. S-adenosylmethionine synthetase family protein. S-adenosylmethionine synthetase","AT5G58650","PSY1",469.22,-1.0606,0.12555,-8.4478,{"v":2.97e-17,"d":"2.97E-17"},{"v":8.5e-16,"d":"8.50E-16"},"full_name=plant peptide containing sulfated tyrosine 1. plant peptide containing sulfated tyrosine 1. Encodes PSY1, an18-aa tyrosine-sulfated glycopeptide that promotes cellular proliferation and expansion. PSY1 is widely expressed in various tissues, including shoot apical meristem, and is highly up-regulated by wounding. Perception of PSY1 depends on At1g72300, a leucine-rich repeat receptor kinase (LRR-RK)."]
["AT4G06746","RAP2.9",37.783,3.6962,0.46037,8.0287,{"v":9.85e-16,"d":"9.85E-16"},{"v":3.18e-14,"d":"3.18E-14"},"full_name=related to AP2 9. related to AP2 9. encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.9). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1 and RAP2.10.","AT1G51680","4CL1",737.18,-1.005,0.1166,-8.6193,{"v":6.74e-18,"d":"6.74E-18"},2.11E-16,"full_name=4-coumarate:CoA ligase 1. 4-coumarate:CoA ligase 1. encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. In addition to 4-coumarate, it also converts ferulate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, ferulic acid, caffeic acid and 5-OH-ferulic acid. At4CL1 was unable to use sinapic acid as substrate.","AT5G58160","FH13",1735.3,1.3057,0.14315,9.1206,7.47E-20,{"v":2.27e-18,"d":"2.27E-18"},"actin binding protein.","AT1G19230","ATRBOHE",224.48,-2.0104,0.18228,-11.029,2.76E-28,{"v":8.09e-27,"d":"8.09E-27"},"Riboflavin synthase-like superfamily protein.","AT3G05200","ATL6",541.26,0.91278,0.10809,8.4443,3.06E-17,{"v":8.75e-16,"d":"8.75E-16"},"full_name=Arabidopsis toxicos en levadura 6. RING/U-box superfamily protein. Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6)."]
["AT1G62710","BETA-VPE",9556.8,0.68911,0.085958,8.0168,1.09E-15,{"v":3.5e-14,"d":"3.50E-14"},"full_name=beta vacuolar processing enzyme. beta vacuolar processing enzyme. Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins.","AT3G08720","S6K2",677.23,0.98715,0.11469,8.6068,{"v":7.51e-18,"d":"7.51E-18"},{"v":2.35e-16,"d":"2.35E-16"},"full_name=serine/threonine protein kinase 2. serine/threonine protein kinase 2. Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.","AT4G03050","AOP3",1128.6,-3.7618,0.41282,-9.1126,{"v":8.04e-20,"d":"8.04E-20"},{"v":2.44e-18,"d":"2.44E-18"},"2-oxoglutarate-dependent dioxygenase. Transcriptional silent in leaf tissues of ecotype Col. The transcribed allele in ecotype Ler encodes a 2-oxoglutarate-dependent dioxygenase which is involved in glucosinolate biosynthesis. The natural variation in this locus explains the diversification of hydroxyalkyl glucosinolates among different ecotypes of Arabidopsis.","AT1G09155","PP2-B15",103.98,-2.9001,0.26299,-11.027,{"v":2.83e-28,"d":"2.83E-28"},{"v":8.28e-27,"d":"8.28E-27"},"full_name=phloem protein 2-B15. phloem protein 2-B15.","AT2G45510","CYP704A2",5713.6,-0.5624,0.066704,-8.4313,3.42E-17,{"v":9.74e-16,"d":"9.74E-16"},"full_name=cytochrome P450, family 704, subfamily A, polypeptide 2. cytochrome P450, family 704, subfamily A, polypeptide 2. member of CYP704A"]
["AT5G10730",null,441.86,0.97348,0.12156,8.0083,{"v":1.16e-15,"d":"1.16E-15"},{"v":3.74e-14,"d":"3.74E-14"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT2G30200","EMB3147",499.83,-1.079,0.12541,-8.6039,{"v":7.71e-18,"d":"7.71E-18"},{"v":2.4E-16,"d":"2.40E-16"},"full_name=EMBRYO DEFECTIVE 3147. EMBRYO DEFECTIVE 3147.","AT1G70560","TAA1",168.54,-1.86,0.20427,-9.1055,{"v":8.59e-20,"d":"8.59E-20"},{"v":2.6E-18,"d":"2.60E-18"},"full_name=tryptophan aminotransferase of Arabidopsis 1. tryptophan aminotransferase of Arabidopsis 1. TAA1 is involved in the shade-induced production of indole-3-pyruvate (IPA), a precursor to IAA, a biologically active auxin. It is also involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling. This enzyme can catalyze the formation of IPA from L-tryptophan. Though L-Trp is expected to be the preferred substrate in vivo, TAA1 also acts as an aminotransferase using L-Phe, L-Tyr, L-Leu, L-Ala, L-Met, and L-Gln.","AT3G52930","FBA8",119.6,-2.8593,0.25932,-11.026,{"v":2.87e-28,"d":"2.87E-28"},{"v":8.37e-27,"d":"8.37E-27"},"full_name=fructose-bisphosphate aldolase 8. Aldolase superfamily protein.","AT5G57660","COL5",52.712,4.0818,0.48413,8.4312,3.42E-17,{"v":9.74e-16,"d":"9.74E-16"},"full_name=CONSTANS-like 5. CONSTANS-like 5."]
["AT4G38250","AT4G38250",610.36,0.9076,0.11339,8.0041,{"v":1.2E-15,"d":"1.20E-15"},{"v":3.87e-14,"d":"3.87E-14"},"Transmembrane amino acid transporter family protein.","AT2G24170",null,345.13,-1.1644,0.13544,-8.5972,{"v":8.17e-18,"d":"8.17E-18"},{"v":2.54e-16,"d":"2.54E-16"},"Endomembrane protein 70 protein family.","AT1G74030","ENO1",122.46,-2.8885,0.3173,-9.1033,{"v":8.76e-20,"d":"8.76E-20"},{"v":2.64e-18,"d":"2.64E-18"},"full_name=enolase 1. enolase 1. Encodes the plastid-localized phosphoenolpyruvate enolase. Mutant plants have abnormal trichomes.","AT3G17130",null,70.865,-4.0695,0.36955,-11.012,{"v":3.35e-28,"d":"3.35E-28"},{"v":9.76e-27,"d":"9.76E-27"},"Plant invertase/pectin methylesterase inhibitor superfamily protein.","AT5G22060","J2",639.28,0.81267,0.096407,8.4296,{"v":3.47e-17,"d":"3.47E-17"},{"v":9.86e-16,"d":"9.86E-16"},"full_name=DNAJ homologue 2. DNAJ homologue 2. Co-chaperonin similar to E. coli DnaJ"]
["AT1G73010","PS2",133.98,1.614,0.20171,8.0017,{"v":1.23e-15,"d":"1.23E-15"},3.93E-14,"full_name=phosphate starvation-induced gene 2. inorganic pyrophosphatase 1. Encodes PPsPase1, a pyrophosphate-specific phosphatase catalyzing the specific cleavage of pyrophosphate (Km 38.8 uM) with an alkaline catalytic pH optimum. Expression is upregulated in the shoot of cax1/cax3 mutant.","AT1G36370","SHM7",590.23,1.4396,0.16747,8.5961,8.25E-18,{"v":2.56e-16,"d":"2.56E-16"},"full_name=serine hydroxymethyltransferase 7. serine hydroxymethyltransferase 7. Encodes a putative serine hydroxymethyltransferase.","AT1G50020",null,432.27,1.4489,0.15918,9.1023,{"v":8.85e-20,"d":"8.85E-20"},{"v":2.66e-18,"d":"2.66E-18"},"tubulin alpha-6 chain.","AT5G28910",null,84.064,-5.6443,0.51291,-11.004,{"v":3.64e-28,"d":"3.64E-28"},1.06E-26,"alpha-(1,6)-fucosyltransferase.","AT3G48270","CYP71A26",1760.3,-0.92828,0.11016,-8.4264,{"v":3.56e-17,"d":"3.56E-17"},1.01E-15,"full_name=cytochrome P450, family 71, subfamily A, polypeptide 26. cytochrome P450, family 71, subfamily A, polypeptide 26. putative cytochrome P450"]
["AT5G51760","AHG1",319.91,2.0397,0.25493,8.0011,{"v":1.23e-15,"d":"1.23E-15"},{"v":3.95e-14,"d":"3.95E-14"},"full_name=ABA-hypersensitive germination 1. Protein phosphatase 2C family protein. Encodes AHG1 (ABA-hypersensitive germination 1), a putative protein phosphatase 2C (PP2C). Expressed in seeds. AHG1 functions in seed development and germination.","AT3G08030","ATHA2-1",355.15,1.1931,0.13887,8.5918,{"v":8.56e-18,"d":"8.56E-18"},{"v":2.66e-16,"d":"2.66E-16"},"DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642). The mRNA of this gene is expressed in viable seeds. Its detection in a dry seed lot has potential for use as a molecular marker for germination performance as absence of expression correlates with decreased germination.","AT2G40460",null,4063.2,-1.1984,0.13167,-9.1021,{"v":8.86e-20,"d":"8.86E-20"},{"v":2.66e-18,"d":"2.66E-18"},"Major facilitator superfamily protein.","AT5G03160","P58IPK",156.7,-2.196,0.19963,-11,{"v":3.81e-28,"d":"3.81E-28"},1.11E-26,"full_name=homolog of mamallian P58IPK. DnaJ P58IPK-like protein. J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast.","AT3G57020",null,7469.4,-0.63984,0.076031,-8.4154,{"v":3.91e-17,"d":"3.91E-17"},{"v":1.11e-15,"d":"1.11E-15"},"Calcium-dependent phosphotriesterase superfamily protein."]
["AT2G27385",null,140.85,-1.5194,0.19016,-7.9901,1.35E-15,{"v":4.31e-14,"d":"4.31E-14"},"Pollen Ole e 1 allergen and extensin family protein.","AT3G45010","scpl48",927.59,0.89103,0.10375,8.5886,{"v":8.8e-18,"d":"8.80E-18"},2.73E-16,"full_name=serine carboxypeptidase-like 48. serine carboxypeptidase-like 48.","AT5G56150","UBC30",1058.6,1.0831,0.11904,9.099,{"v":9.12e-20,"d":"9.12E-20"},{"v":2.74e-18,"d":"2.74E-18"},"full_name=ubiquitin-conjugating enzyme 30. ubiquitin-conjugating enzyme 30.","AT1G78680","GGH2",86.228,-4.1444,0.37751,-10.978,{"v":4.87e-28,"d":"4.87E-28"},1.41E-26,"full_name=gamma-glutamyl hydrolase 2. gamma-glutamyl hydrolase 2. The Arabidopsis protein AtGGH2 is a gamma-glutamyl hydrolase acting specifically on monoglutamates. The enzyme is involved in the tetrahydrofolate metabolism and located to the vacuole.","AT3G20770","EIN3",3797.2,0.56467,0.067131,8.4115,{"v":4.05e-17,"d":"4.05E-17"},1.14E-15,"full_name=ETHYLENE-INSENSITIVE3. Ethylene insensitive 3 family protein. Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses."]
["AT3G29773",null,37.959,-4.9215,0.61683,-7.9787,1.48E-15,{"v":4.72e-14,"d":"4.72E-14"},"pseudogene.","AT1G16770",null,1503.8,0.94463,0.11001,8.5867,{"v":8.95e-18,"d":"8.95E-18"},2.76E-16,"hypothetical protein.","AT1G56340","CRT1a",946.88,-1.0055,0.11053,-9.0965,{"v":9.33e-20,"d":"9.33E-20"},{"v":2.79e-18,"d":"2.79E-18"},"full_name=calreticulin 1a. calreticulin 1a. Encodes one of three Arabidopsis calreticulins. In CRT-deficient mouse fibroblasts, this protein restores ER Ca2+ levels.","AT1G23310","GGT1",205.41,1.901,0.17318,10.977,4.91E-28,1.42E-26,"full_name=glutamate:glyoxylate aminotransferase. glutamate:glyoxylate aminotransferase. Identified by cloning the gene that corresponded to a purified protein having glyoxylate aminotransferase activity. Localized to the peroxisome and thought to be involved in photorespiration/ metabolic salvage pathway.","AT5G16750","TOZ",510.37,0.9043,0.10753,8.4095,{"v":4.12e-17,"d":"4.12E-17"},{"v":1.16e-15,"d":"1.16E-15"},"full_name=TORMOZEMBRYO DEFECTIVE. Transducin family protein / WD-40 repeat family protein. Encodes a nucleolar localized WD-40 repeat protein that is preferentially expressed in dividing cells and is required for regulated division planes and embryo development."]
["AT1G77270",null,63.253,-2.3781,0.29813,-7.9767,{"v":1.5e-15,"d":"1.50E-15"},{"v":4.79e-14,"d":"4.79E-14"},"hypothetical protein.","AT5G45690",null,26307,0.82133,0.095662,8.5857,{"v":9.03e-18,"d":"9.03E-18"},2.79E-16,"histone acetyltransferase (DUF1264).","AT1G55500","ECT4",467.65,1.3256,0.14577,9.0938,{"v":9.56e-20,"d":"9.56E-20"},{"v":2.86e-18,"d":"2.86E-18"},"full_name=evolutionarily conserved C-terminal region 4. evolutionarily conserved C-terminal region 4.","AT1G02816",null,1055.9,-1.5481,0.14108,-10.973,{"v":5.15e-28,"d":"5.15E-28"},{"v":1.49e-26,"d":"1.49E-26"},"pectinesterase (Protein of unknown function, DUF538).","AT5G01700",null,59.229,3.0407,0.36166,8.4078,{"v":4.18e-17,"d":"4.18E-17"},1.18E-15,"Protein phosphatase 2C family protein."]
["AT4G04840","MSRB6",5207.8,0.75859,0.095116,7.9754,1.52E-15,4.83E-14,"full_name=methionine sulfoxide reductase B6. methionine sulfoxide reductase B6.","AT3G13310","DJC66",569.19,-1.5136,0.17641,-8.5803,{"v":9.46e-18,"d":"9.46E-18"},2.91E-16,"Chaperone DnaJ-domain superfamily protein.","AT5G62690","TUB2",443.92,-1.655,0.18215,-9.0859,1.03E-19,{"v":3.07e-18,"d":"3.07E-18"},"full_name=tubulin beta chain 2. tubulin beta chain 2. encodes tubulin beta-2/beta-3 chain","AT4G33467",null,348.42,2.597,0.23689,10.963,{"v":5.77e-28,"d":"5.77E-28"},{"v":1.66e-26,"d":"1.66E-26"},"hypothetical protein.","AT4G03230",null,307.64,1.1609,0.1382,8.4003,{"v":4.45e-17,"d":"4.45E-17"},1.25E-15,"G-type lectin S-receptor-like Serine/Threonine-kinase."]
["AT3G12960","SMP1",187.09,1.6218,0.20344,7.9717,{"v":1.57e-15,"d":"1.57E-15"},{"v":4.97e-14,"d":"4.97E-14"},"full_name=seed maturation protein 1. seed maturation protein.","AT1G11680","CYP51G1",569.86,-1.0754,0.12537,-8.5785,{"v":9.62e-18,"d":"9.62E-18"},{"v":2.96e-16,"d":"2.96E-16"},"full_name=CYTOCHROME P450 51G1. CYTOCHROME P450 51G1. putative obtusifoliol 14-alpha demethylase involved in sterol biosynthesis.","AT4G36930","SPT",111.38,-2.0564,0.22667,-9.0724,1.16E-19,3.47E-18,"full_name=SPATULA. basic helix-loop-helix (bHLH) DNA-binding superfamily protein. Encodes a transcription factor of the bHLH protein family. Mutants have abnormal, unfused carpels and reduced seed dormancy.","AT2G11910",null,295.26,1.556,0.14201,10.957,{"v":6.16e-28,"d":"6.16E-28"},{"v":1.77e-26,"d":"1.77E-26"},"hypothetical protein.","AT1G68220",null,969.59,-0.75766,0.090287,-8.3917,{"v":4.79e-17,"d":"4.79E-17"},1.35E-15,"aerobic coproporphyrinogen-III oxidase (DUF1218)."]
["AT1G26770","EXPA10",150.25,1.6754,0.21019,7.9711,{"v":1.57e-15,"d":"1.57E-15"},4.98E-14,"full_name=expansin A10. expansin A10. Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","AT4G11040","RDO5",539.96,1.4592,0.17017,8.5749,{"v":9.92e-18,"d":"9.92E-18"},{"v":3.04e-16,"d":"3.04E-16"},"Protein phosphatase 2C family protein. Encodes a nuclear localized protein with sequence similarity to PP2C phosphatases that is involved in seed dormancy. Loss of function mutations have reduced seed dormancy but does not act through ABA or DOG1 pathways.","AT4G39130",null,234.53,2.4705,0.27252,9.0654,1.24E-19,{"v":3.69e-18,"d":"3.69E-18"},"Dehydrin family protein.","AT3G63160","OEP6",162.06,2.1026,0.19198,10.952,{"v":6.47e-28,"d":"6.47E-28"},{"v":1.86e-26,"d":"1.86E-26"},"full_name=outer envelope protein 6. outer envelope membrane protein.","AT5G46180","DELTA-OAT",1255.4,0.75877,0.09055,8.3796,{"v":5.31e-17,"d":"5.31E-17"},1.49E-15,"full_name=ornithine-delta-aminotransferase. ornithine-delta-aminotransferase. Encodes an ornithine delta-aminotransferase that is transcriptionally up-regulated in young seedlings and in response to salt stress. It is unlikely to play a role in salt-stress-induced proline accumulation, however, it appears to participate in arginine and ornithine catabolism."]
["AT5G59170",null,11072,1.173,0.14721,7.9679,{"v":1.61e-15,"d":"1.61E-15"},{"v":5.1e-14,"d":"5.10E-14"},"Proline-rich extensin-like family protein.","AT2G34770","FAH1",268.05,1.5186,0.17725,8.5674,{"v":1.06e-17,"d":"1.06E-17"},{"v":3.24e-16,"d":"3.24E-16"},"full_name=fatty acid hydroxylase 1. fatty acid hydroxylase 1. encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death.","AT1G28330","DYL1",685.6,1.3064,0.14414,9.0635,{"v":1.26e-19,"d":"1.26E-19"},{"v":3.75e-18,"d":"3.75E-18"},"full_name=dormancy-associated protein-like 1. dormancy-associated protein-like 1. dormancy-associated protein (DRM1)","AT2G20920",null,899.78,0.98716,0.090182,10.946,{"v":6.92e-28,"d":"6.92E-28"},{"v":1.99e-26,"d":"1.99E-26"},"chaperone (DUF3353).","AT1G76590","PLATZ2",3431,0.82903,0.099092,8.3663,{"v":5.95e-17,"d":"5.95E-17"},1.66E-15,"PLATZ transcription factor family protein."]
["AT1G77240","AAE2",203.16,-1.3011,0.16347,-7.9591,{"v":1.73e-15,"d":"1.73E-15"},{"v":5.47e-14,"d":"5.47E-14"},"full_name=acyl activating enzyme 2. AMP-dependent synthetase and ligase family protein.","AT5G63410",null,262.43,-1.304,0.15233,-8.5606,1.12E-17,3.43E-16,"Leucine-rich repeat protein kinase family protein.","AT5G56300","GAMT2",274.4,-1.5068,0.16629,-9.0611,1.29E-19,{"v":3.83e-18,"d":"3.83E-18"},"full_name=gibberellic acid methyltransferase 2. gibberellic acid methyltransferase 2. A member of the Arabidopsis SABATH methyltransferase gene family. Encodes GAMT2, a methyltransferase that uses S-adenosine-L-methionine (SAM) as a methyl donor to methylate the carboxyl group of GAs, resulting in the methyl esters of GAs (MeGAs). Expressed most highly in the siliques during seed development.","AT3G59900","ARGOS",102.31,-5.0733,0.46377,-10.939,{"v":7.49e-28,"d":"7.49E-28"},{"v":2.15e-26,"d":"2.15E-26"},"full_name=AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE. auxin-regulated gene involved in organ size. Encodes ARGOS (Auxin-Regulated Gene Involved in Organ Size). Inducible by auxin. Involved in lateral organ size control. Transgenic plants expressing sense or antisense ARGOS cDNA display enlarged or reduced aerial organs, respectively. The alteration in organ size is attributable mainly to changes in cell number and the duration of organ growth.","AT1G65970","TPX2",491.71,1.7212,0.20581,8.363,{"v":6.11e-17,"d":"6.11E-17"},1.71E-15,"full_name=thioredoxin-dependent peroxidase 2. thioredoxin-dependent peroxidase 2. thioredoxin-dependent peroxidase 2"]
["AT2G14960","GH3.1",39.051,4.2733,0.53702,7.9575,1.76E-15,{"v":5.53e-14,"d":"5.53E-14"},"Auxin-responsive GH3 family protein. encodes a protein similar to IAA-amido synthases. Lines carrying an insertion in this gene are hypersensitive to auxin.","AT4G33010","GLDP1",172.77,-1.712,0.20001,-8.5598,1.13E-17,{"v":3.45e-16,"d":"3.45E-16"},"full_name=glycine decarboxylase P-protein 1. glycine decarboxylase P-protein 1.","AT2G27370","CASP3",101.51,-2.67,0.29469,-9.0603,{"v":1.3e-19,"d":"1.30E-19"},{"v":3.85e-18,"d":"3.85E-18"},"full_name=Casparian strip membrane domain protein 3. Uncharacterized protein family (UPF0497).","AT3G44735","PSK3",102.21,-4.8515,0.44376,-10.933,{"v":8.03e-28,"d":"8.03E-28"},{"v":2.3e-26,"d":"2.30E-26"},"full_name=PHYTOSULFOKINE 3 PRECURSOR. PHYTOSULFOKINE 3 PRECURSOR. Phytosulfokine 3 precursor, coding for a unique plant peptide growth factor.","AT4G22920","NYE1",2964.7,0.62804,0.075106,8.362,{"v":6.17e-17,"d":"6.17E-17"},{"v":1.72e-15,"d":"1.72E-15"},"full_name=NON-YELLOWING 1. non-yellowing 1. Similar to the tomato senescence-inducible chloroplast stay-green protein 1. It is upregulated during maximal senescence in the Arabidopsis life cycle, especially in senescent leaves. Acts antagonistically with SGR2 to balance chlorophyll catabolism in chloroplasts with the dismantling and remobilizing of other cellular components in senescing leaf cells."]
["AT1G52890","NAC019",255.2,1.4468,0.18225,7.9386,{"v":2.05e-15,"d":"2.05E-15"},{"v":6.43e-14,"d":"6.43E-14"},"full_name=NAC domain containing protein 19. NAC domain containing protein 19. encodes a NAC transcription factor whose expression is induced by drought, high salt, and abscisic acid. This gene binds to ERD1 promoter in vitro.","AT3G13330","PA200",1378.7,0.82278,0.096238,8.5494,1.24E-17,{"v":3.77e-16,"d":"3.77E-16"},"full_name=proteasome activating protein 200. proteasome activating protein 200. Encodes a protein that interacts with the 26S proteasome. Mutants are phenotypically indistinguishable from wild type plants under a variety of growth conditions. Protein levels increase upon exposure of seedlings to MG132, a specific, potent, reversible, and cell-permeable proteasome inhibitor.","AT2G01275",null,117.45,1.9473,0.21494,9.0598,{"v":1.31e-19,"d":"1.31E-19"},{"v":3.86e-18,"d":"3.86E-18"},"RING/FYVE/PHD zinc finger superfamily protein.","AT5G06360",null,1507.3,0.86144,0.078803,10.931,{"v":8.15e-28,"d":"8.15E-28"},2.33E-26,"Ribosomal protein S8e family protein.","AT1G48470","GLN1;5",1981.8,-0.63763,0.076261,-8.3613,{"v":6.21e-17,"d":"6.21E-17"},{"v":1.73e-15,"d":"1.73E-15"},"full_name=glutamine synthetase 1;5. glutamine synthetase 1;5. Encodes cytosolic glutamine synthase isozyme. Expression of mRNA is not detectable in roots."]
["AT1G67120","MDN1",151.97,1.5806,0.19956,7.9205,{"v":2.37e-15,"d":"2.37E-15"},{"v":7.43e-14,"d":"7.43E-14"},"midasin-like protein. Represents a homolog of the yeast MDN gene, which encodes a non-ribosomal protein involved in the maturation and assembly of the 60S ribosomal subunit. In Arabidopsis, it is essential for female gametogenesis progression.","AT1G03790","SOM",2080.7,0.92426,0.10811,8.549,1.24E-17,{"v":3.78e-16,"d":"3.78E-16"},"full_name=SOMNUS. Zinc finger C-x8-C-x5-C-x3-H type family protein. Encodes SOMNUS (SOM), a nucleus-localized CCCH-type zinc finger protein. SOM negatively regulates light-dependent seed germination downstream of PIL5 (AT2G20180).","AT4G37870","PCK1",4698.7,0.88445,0.097724,9.0505,1.42E-19,4.19E-18,"full_name=phosphoenolpyruvate carboxykinase 1. phosphoenolpyruvate carboxykinase 1. Encodes a phosphoenolpyruvate carboxykinase that localizes to the cytosol.","AT3G29260",null,77.104,-3.5399,0.32406,-10.924,{"v":8.9e-28,"d":"8.90E-28"},2.54E-26,"NAD(P)-binding Rossmann-fold superfamily protein.","AT1G03600","PSB27",417.24,0.98566,0.11798,8.3545,6.57E-17,{"v":1.83e-15,"d":"1.83E-15"},"photosystem II family protein."]
["AT3G17520","SSLEA",8934.4,1.0971,0.13878,7.905,{"v":2.68e-15,"d":"2.68E-15"},{"v":8.4e-14,"d":"8.40E-14"},"Late embryogenesis abundant protein (LEA) family protein.","AT2G37120",null,319.26,-1.2658,0.14809,-8.5477,{"v":1.26e-17,"d":"1.26E-17"},{"v":3.81e-16,"d":"3.81E-16"},"S1FA-like DNA-binding protein.","AT1G73980","TTM1",600.7,-1.0557,0.11665,-9.0504,1.42E-19,4.19E-18,"Phosphoribulokinase / Uridine kinase family.","AT5G01820","SR1",553.71,-1.8559,0.1699,-10.923,{"v":8.93e-28,"d":"8.93E-28"},2.54E-26,"full_name=serine/threonine protein kinase 1. serine/threonine protein kinase 1. Encodes a CBL-interacting serine/threonine protein kinase.","AT4G28390","AAC3",1368.7,-0.81612,0.097694,-8.3538,{"v":6.61e-17,"d":"6.61E-17"},{"v":1.83e-15,"d":"1.83E-15"},"full_name=ADP/ATP carrier 3. ADP/ATP carrier 3. Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli)."]
["AT5G04380",null,813.34,0.91729,0.11611,7.9005,{"v":2.78e-15,"d":"2.78E-15"},{"v":8.69e-14,"d":"8.69E-14"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT3G02790","MBS1",251.9,-1.3943,0.16325,-8.5405,1.34E-17,{"v":4.05e-16,"d":"4.05E-16"},"zinc finger (C2H2 type) family protein.","AT5G38170",null,116.45,-2.4442,0.27008,-9.0497,1.43E-19,{"v":4.21e-18,"d":"4.21E-18"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT1G55690",null,158.13,-2.0098,0.18411,-10.916,{"v":9.64e-28,"d":"9.64E-28"},{"v":2.74e-26,"d":"2.74E-26"},"Sec14p-like phosphatidylinositol transfer family protein.","AT1G26800","MPSR1",1128.2,-0.89252,0.1069,-8.3487,{"v":6.9E-17,"d":"6.90E-17"},{"v":1.91e-15,"d":"1.91E-15"},"RING/U-box superfamily protein."]
["AT5G51210","OLEO3",9014,-0.8333,0.10548,-7.8998,2.79E-15,{"v":8.73e-14,"d":"8.73E-14"},"full_name=oleosin3. oleosin3. Encodes oleosin3, a protein found in oil bodies, involved in seed lipid accumulation.","AT5G11520","ASP3",795.33,0.86787,0.1018,8.5256,{"v":1.52e-17,"d":"1.52E-17"},{"v":4.6e-16,"d":"4.60E-16"},"full_name=aspartate aminotransferase 3. aspartate aminotransferase 3. Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves.","AT1G76670","URGT1",576.81,-1.0539,0.11647,-9.0486,1.45E-19,{"v":4.25e-18,"d":"4.25E-18"},"Nucleotide-sugar transporter family protein.","AT1G08920","ESL1",163.21,-3.0397,0.27846,-10.916,{"v":9.65e-28,"d":"9.65E-28"},{"v":2.74e-26,"d":"2.74E-26"},"full_name=ERD (early response to dehydration) six-like 1. ERD (early response to dehydration) six-like 1. Encodes ESL1, a transporter for monosaccharides.","AT5G07020","MPH1",306.18,-1.1461,0.13729,-8.348,{"v":6.94e-17,"d":"6.94E-17"},1.92E-15,"proline-rich family protein."]
["AT2G44060","LEA26",576.51,-0.90516,0.11463,-7.8967,{"v":2.86e-15,"d":"2.86E-15"},{"v":8.93e-14,"d":"8.93E-14"},"Late embryogenesis abundant protein, group 2.","AT4G18650","DOGL4",643.67,1.0584,0.12422,8.5203,1.59E-17,{"v":4.81e-16,"d":"4.81E-16"},"transcription factor-like protein. A maternally expressed imprinted gene.","AT1G05450",null,486.7,-2.1635,0.23912,-9.0477,{"v":1.46e-19,"d":"1.46E-19"},{"v":4.28e-18,"d":"4.28E-18"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein. Encodes a Protease inhibitor/seed storage/LTP family protein","AT1G66760",null,78.386,-4.0368,0.3706,-10.893,1.25E-27,{"v":3.53e-26,"d":"3.53E-26"},"MATE efflux family protein.","AT4G20020","MORF1",1233.1,-0.72377,0.086747,-8.3434,{"v":7.22e-17,"d":"7.22E-17"},1.99E-15,"full_name=multiple organellar RNA editing factor 1. multiple organellar RNA editing factor. Encodes a protein involved in RNA editing in mitochondria."]
["AT5G60220","TET4",76.124,2.2574,0.28596,7.8941,{"v":2.92e-15,"d":"2.92E-15"},{"v":9.1e-14,"d":"9.10E-14"},"full_name=tetraspanin4. tetraspanin4. Member of TETRASPANIN family","AT4G08685","SAH7",116.77,-2.0968,0.24634,-8.512,1.71E-17,{"v":5.15e-16,"d":"5.15E-16"},"Pollen Ole e 1 allergen and extensin family protein. Encodes a protein, expressed in leaves, with similarity to pollen allergens.","AT4G16250","PHYD",523.34,1.4398,0.15916,9.0461,1.48E-19,{"v":4.33e-18,"d":"4.33E-18"},"full_name=phytochrome D. phytochrome D. Encodes a phytochrome photoreceptor with a function similar to that of phyB that absorbs the red/far-red part of the light spectrum and is involved in light responses. It cannot compensate for phyB loss in Arabidopsis but can substitute for tobacco phyB in vivo.","AT1G72570","AIL1",470.55,-2.2086,0.2028,-10.891,{"v":1.28e-27,"d":"1.28E-27"},{"v":3.61e-26,"d":"3.61E-26"},"Integrase-type DNA-binding superfamily protein.","AT1G20100",null,1010.6,0.78795,0.094476,8.3402,{"v":7.42e-17,"d":"7.42E-17"},2.04E-15,"DNA ligase-like protein."]
["AT1G21440",null,212.07,-1.31,0.16604,-7.8896,{"v":3.03e-15,"d":"3.03E-15"},{"v":9.42e-14,"d":"9.42E-14"},"Phosphoenolpyruvate carboxylase family protein.","AT4G22756","SMO1-2",223.17,-1.3649,0.16038,-8.5107,{"v":1.73e-17,"d":"1.73E-17"},{"v":5.2e-16,"d":"5.20E-16"},"full_name=sterol C4-methyl oxidase 1-2. sterol C4-methyl oxidase 1-2. Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. More specifically functions as a 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha- methyl oxidase.","AT1G07150","MAPKKK13",265.08,2.4071,0.26621,9.0421,{"v":1.54e-19,"d":"1.54E-19"},4.48E-18,"full_name=mitogen-activated protein kinase kinase kinase 13. mitogen-activated protein kinase kinase kinase 13. member of MEKK subfamily","AT3G11410","PP2CA",1464.8,-1.1783,0.10823,-10.887,{"v":1.32e-27,"d":"1.32E-27"},{"v":3.74e-26,"d":"3.74E-26"},"full_name=protein phosphatase 2CA. protein phosphatase 2CA. Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.","AT3G18830","PMT5",456.84,1.2088,0.14497,8.3382,{"v":7.54e-17,"d":"7.54E-17"},{"v":2.07e-15,"d":"2.07E-15"},"full_name=polyol/monosaccharide transporter 5. polyol/monosaccharide transporter 5. This gene encodes a plasma membrane-localized polyol/cyclitol/monosaccharide-H+-symporter. The symporter is able to catalyze the energy-dependent membrane passage of a wide range of linear polyols (three to six carbon backbone), of cyclic polyols (<i>myo</i>-inositol), and of numerous monosaccharides, including pyranose ring-forming and furanose ring-forming hexoses and pentoses. This gene belongs to a monosaccharide transporter-like (MST-like) superfamily."]
["AT3G12145","FLR1",312.69,-1.2889,0.16338,-7.8888,{"v":3.05e-15,"d":"3.05E-15"},{"v":9.47e-14,"d":"9.47E-14"},"full_name=FLOR1. Leucine-rich repeat (LRR) family protein. A novel leucine-rich repeat protein. Interacts directly with MADS domain transcription factor.","AT4G24810",null,153.45,-1.6253,0.19103,-8.5082,1.77E-17,{"v":5.31e-16,"d":"5.31E-16"},"Protein kinase superfamily protein. similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147)","AT1G05850","POM1",2175.2,-0.95524,0.10577,-9.0313,{"v":1.7e-19,"d":"1.70E-19"},{"v":4.94e-18,"d":"4.94E-18"},"full_name=POM-POM1. Chitinase family protein. Encodes an endo chitinase-like protein AtCTL1. Essential for tolerance to heat, salt and drought stresses. Also involved in root hair development, cell expansion and response to cytokinin. Allelic to erh2. 11 alleles described in Hauser (1995). Mutant is defective in acquired thermotolerance, appears semidwarf throughout its life cycle and has extra lateral branches. There are two EMS alleles. Expression of AtHSP101 is not affected in the mutants.","AT1G76520","PILS3",98.252,3.0517,0.28051,10.879,1.45E-27,{"v":4.08e-26,"d":"4.08E-26"},"Auxin efflux carrier family protein.","AT1G15340","MBD10",2929.9,-0.66575,0.079943,-8.3278,{"v":8.24e-17,"d":"8.24E-17"},2.26E-15,"full_name=methyl-CPG-binding domain 10. methyl-CPG-binding domain 10. Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins."]
["AT5G57560","TCH4",258.1,-1.6391,0.20787,-7.8853,{"v":3.14e-15,"d":"3.14E-15"},{"v":9.72e-14,"d":"9.72E-14"},"full_name=Touch 4. Xyloglucan endotransglucosylase/hydrolase family protein. Encodes a cell wall-modifying enzyme, rapidly upregulated in response to environmental stimuli","AT2G39280",null,190.59,-1.5193,0.17873,-8.5004,1.89E-17,{"v":5.67e-16,"d":"5.67E-16"},"Ypt/Rab-GAP domain of gyp1p superfamily protein.","AT5G21280","ATR7",298.81,1.3732,0.15208,9.0293,{"v":1.73e-19,"d":"1.73E-19"},{"v":5.02e-18,"d":"5.02E-18"},"hydroxyproline-rich glycoprotein family protein.","AT5G48300","ADG1",404.98,-1.3642,0.1254,-10.879,{"v":1.46e-27,"d":"1.46E-27"},{"v":4.1e-26,"d":"4.10E-26"},"full_name=ADP glucose pyrophosphorylase 1. ADP glucose pyrophosphorylase 1. Encodes the small subunit of ADP-glucose pyrophosphorylase. The small subunit is the catalytic isoform responsible for ADP-glucose pyrophosphorylase activity. The presence of the small subunit is required for large subunit stability. Two isoforms of the small subunit (ApS1 and ApS2) have been described. ApS1 is the major small subunit isoform present in all plant tissues tested.","AT1G15100","RHA2A",401.17,1.0455,0.12567,8.3196,8.83E-17,{"v":2.42e-15,"d":"2.42E-15"},"full_name=RING-H2 finger A2A. RING-H2 finger A2A. Encodes a putative RING-H2 finger protein RHA2a."]
["AT4G24610",null,361.93,-1.0984,0.13933,-7.8839,{"v":3.17e-15,"d":"3.17E-15"},{"v":9.81e-14,"d":"9.81E-14"},"pesticidal crystal cry8Ba protein.","AT3G15180",null,544.32,0.97265,0.11444,8.4996,{"v":1.9e-17,"d":"1.90E-17"},{"v":5.7e-16,"d":"5.70E-16"},"ARM repeat superfamily protein.","AT4G22756","SMO1-2",54.642,-5.1685,0.57257,-9.0268,1.77E-19,{"v":5.13e-18,"d":"5.13E-18"},"full_name=sterol C4-methyl oxidase 1-2. sterol C4-methyl oxidase 1-2. Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. More specifically functions as a 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha- methyl oxidase.","AT5G23230","NIC2",411.54,1.4195,0.13067,10.863,{"v":1.73e-27,"d":"1.73E-27"},4.86E-26,"full_name=nicotinamidase 2. nicotinamidase 2.","AT5G67330","NRAMP4",588.27,0.8898,0.10701,8.3155,{"v":9.14e-17,"d":"9.14E-17"},{"v":2.5E-15,"d":"2.50E-15"},"full_name=natural resistance associated macrophage protein 4. natural resistance associated macrophage protein 4. Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp3, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination."]
["AT3G63160","OEP6",147.68,-1.5959,0.20284,-7.8675,{"v":3.62e-15,"d":"3.62E-15"},1.12E-13,"full_name=outer envelope protein 6. outer envelope membrane protein.","AT4G09510","CINV2",56.466,-2.998,0.3532,-8.4881,{"v":2.1e-17,"d":"2.10E-17"},{"v":6.28e-16,"d":"6.28E-16"},"full_name=cytosolic invertase 2. cytosolic invertase 2. CINV2 appears to function as a neutral invertase based on the phenotype of a cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues.","AT5G24316",null,853.22,-1.9224,0.21297,-9.0267,1.77E-19,{"v":5.13e-18,"d":"5.13E-18"},"proline-rich family protein.","AT4G25580",null,6340.8,1.3099,0.1206,10.861,1.76E-27,{"v":4.93e-26,"d":"4.93E-26"},"CAP160 protein.","AT4G11360","RHA1B",1707.5,0.94185,0.11331,8.3123,{"v":9.39e-17,"d":"9.39E-17"},{"v":2.56e-15,"d":"2.56E-15"},"full_name=RING-H2 finger A1B. RING-H2 finger A1B. Encodes a putative RING-H2 finger protein RHA1b."]
["AT1G62480",null,2115.3,-0.88692,0.11274,-7.867,{"v":3.63e-15,"d":"3.63E-15"},1.12E-13,"Vacuolar calcium-binding protein-like protein.","AT4G18480","CHLI1",108.23,-1.8931,0.22333,-8.4764,2.32E-17,{"v":6.93e-16,"d":"6.93E-16"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein. Encodes the CHLI subunit of magnesium chelatase which is required for chlorophyll biosynthesis. All four cysteine residues of the protein form two disulfide bonds (Cys102-Cys193 and Cys354-Cys396) under oxidized conditions but are fully reduced by reduction. It was suggested that the redox state of CHLI is regulated in vivo by the change of the redox environment in the chloroplasts probably via the Trx system.","AT1G62380","ACO2",3914.8,-0.9243,0.10259,-9.0097,{"v":2.07e-19,"d":"2.07E-19"},{"v":5.98e-18,"d":"5.98E-18"},"full_name=ACC oxidase 2. ACC oxidase 2. Encodes a protein similar to 1-aminocyclopropane-1-carboxylic oxidase (ACC oxidase). Expression of the AtACO2 transcripts is affected by ethylene.","AT4G27170","SESA4",21927,-3.8455,0.35442,-10.85,{"v":1.99e-27,"d":"1.99E-27"},{"v":5.56e-26,"d":"5.56E-26"},"full_name=seed storage albumin 4. seed storage albumin 4.","AT3G04740","SWP",694.59,0.77055,0.092723,8.3102,{"v":9.55e-17,"d":"9.55E-17"},{"v":2.6E-15,"d":"2.60E-15"},"full_name=STRUWWELPETER. RNA polymerase II transcription mediator. encodes a protein with similarities to subunits of the Mediator complex, required for RNA polymerase II recruitment at target promoters in response to specific activators. Lines carrying loss of function mutations in the gene have reduced cell numbers in aerial organs. On the other hand, lines overexpressing the gene have increased number of small cells in clusters, suggesting cell division is more unsynchronized in the overexpressors.Required for expression of CBF-controlled cold-responsive genes. Required for recruitment of the Mediator complex and RNA polymerase II to CBF-controlled cold-responsive genes. Required for expression of some dark-upregulated genes."]
["AT1G32710",null,64.836,9.5311,1.2126,7.8601,{"v":3.84e-15,"d":"3.84E-15"},1.18E-13,"Cytochrome c oxidase, subunit Vib family protein.","AT1G58290","HEMA1",87.173,-2.1371,0.2525,-8.4636,{"v":2.59e-17,"d":"2.59E-17"},{"v":7.72e-16,"d":"7.72E-16"},"Glutamyl-tRNA reductase family protein. Encodes a protein with glutamyl-tRNA reductase (GluTR) activity, catalyzing the NADPH-dependent reduction of Glu-tRNA(Glu) to glutamate 1-semialdehyde (GSA) with the release of free tRNA(Glu). It is involved in the early steps of chlorophyll biosynthesis.","AT1G14200","SNIPER1",187.9,2.1504,0.23879,9.0054,{"v":2.15e-19,"d":"2.15E-19"},{"v":6.21e-18,"d":"6.21E-18"},"RING/U-box superfamily protein.","AT2G40670","RR16",122.44,-3.8223,0.35239,-10.847,{"v":2.06e-27,"d":"2.06E-27"},{"v":5.75e-26,"d":"5.75E-26"},"full_name=response regulator 16. response regulator 16. response regulator 16","AT2G45980","ATI1",443.73,0.92807,0.11174,8.3058,{"v":9.91e-17,"d":"9.91E-17"},{"v":2.7e-15,"d":"2.70E-15"},"full_name=ATG8-interacting protein 1. mesoderm induction early response protein. Encodes an Atg8-interacting protein that is partially associated with the ER during favorable growth conditions and becomes mainly associated with a spherical compartment that dynamically moves along the ER network. In stress induced plants, ATI1 is localized to a novel plastid associated bodies that are transported to vesicles, in what appears to be an autophagy dependent process. ATI1 interacts with number of other plastid proteins such as NPQ4 and APE1."]
["AT5G39320","UDG4",71.691,-2.2285,0.28371,-7.8548,{"v":4e-15,"d":"4.00E-15"},{"v":1.23e-13,"d":"1.23E-13"},"full_name=UDP-glucose dehydrogenase 4. UDP-glucose 6-dehydrogenase family protein.","AT2G35260","BCM1",48.066,-5.522,0.6525,-8.4628,{"v":2.61e-17,"d":"2.61E-17"},7.77E-16,"CAAX protease self-immunity protein.","AT4G37420",null,68.213,2.8808,0.31997,9.0034,2.19E-19,{"v":6.31e-18,"d":"6.31E-18"},"glycosyltransferase family protein (DUF23).","AT3G25260","NPF4.1",338.77,-1.6522,0.15234,-10.845,{"v":2.1e-27,"d":"2.10E-27"},{"v":5.86e-26,"d":"5.86E-26"},"Major facilitator superfamily protein.","AT5G66310",null,48.679,3.517,0.42396,8.2954,1.08E-16,2.94E-15,"ATP binding microtubule motor family protein."]
["AT5G51500",null,108.9,1.971,0.25114,7.8483,{"v":4.22e-15,"d":"4.22E-15"},{"v":1.29e-13,"d":"1.29E-13"},"Plant invertase/pectin methylesterase inhibitor superfamily.","AT3G44880","ACD1",1785.1,0.86919,0.10275,8.4597,{"v":2.68e-17,"d":"2.68E-17"},{"v":7.96e-16,"d":"7.96E-16"},"full_name=ACCELERATED CELL DEATH 1. Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein. Encodes a pheide a oxygenase (PAO). Accelerated cell death (acd1) mutants show rapid, spreading necrotic responses to both virulent and avirulent Pseudomonas syringae pv. maculicola or pv. tomato pathogens and to ethylene.","AT4G27070","TSB2",1027.2,1.294,0.14395,8.9888,{"v":2.5e-19,"d":"2.50E-19"},{"v":7.19e-18,"d":"7.19E-18"},"full_name=tryptophan synthase beta-subunit 2. tryptophan synthase beta-subunit 2. Tryptophan synthase beta. Expressed at low levels in all tissues.","AT3G48500","PDE312",261.06,1.8998,0.17547,10.827,{"v":2.56e-27,"d":"2.56E-27"},{"v":7.13e-26,"d":"7.13E-26"},"full_name=PIGMENT DEFECTIVE 312. Nucleic acid-binding, OB-fold-like protein.","AT5G39660","CDF2",491.57,0.89718,0.10826,8.2869,{"v":1.16e-16,"d":"1.16E-16"},{"v":3.15e-15,"d":"3.15E-15"},"full_name=cycling DOF factor 2. cycling DOF factor 2. Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions."]
["AT4G25080","CHLM",231.26,-1.2852,0.16378,-7.8471,{"v":4.26e-15,"d":"4.26E-15"},{"v":1.3E-13,"d":"1.30E-13"},"full_name=magnesium-protoporphyrin IX methyltransferase. magnesium-protoporphyrin IX methyltransferase. Encodes a protein with methyltransferase activity responsible for the methylation of magnesium protoporphyrin IX. Mutants defective in this gene are affected in chlorophyll biosynthesis and show a reduction in the accumulation of a number of major thylakoid-associated proteins including components of PSI (LHCI), PSII (LHCII, D1, CP43) and the cytochrome b6f complex (Cytf). By contrast, no significant changes were detected for the proteins of the stroma and the chloroplast envelope.","AT2G47770","TSPO",507.78,1.3888,0.1645,8.4421,3.12E-17,{"v":9.23e-16,"d":"9.23E-16"},"full_name=TSPO(outer membrane tryptophan-rich sensory protein)-related. TSPO(outer membrane tryptophan-rich sensory protein)-like protein. Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks. It is degraded through the autophagy pathway.","AT2G47230","DUF6",65.121,-2.9991,0.33366,-8.9885,2.51E-19,{"v":7.2e-18,"d":"7.20E-18"},"full_name=DOMAIN OF UNKNOWN FUNCTION 724 6. agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 6). Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins.","AT1G01120","KCS1",86.329,-5.053,0.46691,-10.822,{"v":2.7e-27,"d":"2.70E-27"},{"v":7.51e-26,"d":"7.51E-26"},"full_name=3-ketoacyl-CoA synthase 1. 3-ketoacyl-CoA synthase 1. Encodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis.","AT4G14710","ATARD2",1247,-0.72526,0.087519,-8.2869,{"v":1.16e-16,"d":"1.16E-16"},{"v":3.15e-15,"d":"3.15E-15"},"RmlC-like cupins superfamily protein."]
["AT1G10070","BCAT-2",136.51,2.0694,0.26385,7.8432,{"v":4.39e-15,"d":"4.39E-15"},{"v":1.34e-13,"d":"1.34E-13"},"full_name=branched-chain amino acid transaminase 2. branched-chain amino acid transaminase 2. Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant. Involved in cell wall development.","AT2G35470",null,285.04,-1.206,0.14289,-8.4401,{"v":3.17e-17,"d":"3.17E-17"},{"v":9.38e-16,"d":"9.38E-16"},"ribosome maturation factor.","AT2G29980","FAD3",5070.1,-1.529,0.17028,-8.9791,{"v":2.73e-19,"d":"2.73E-19"},{"v":7.83e-18,"d":"7.83E-18"},"full_name=fatty acid desaturase 3. fatty acid desaturase 3. Endoplasmic reticulum enzyme responsible for the synthesis of 18:3 fatty acids from phospholipids. Uses cytochrome b5 as electron donor.","AT2G02580","CYP71B9",72.792,-5.4471,0.50345,-10.82,{"v":2.78e-27,"d":"2.78E-27"},7.71E-26,"full_name=cytochrome P450, family 71, subfamily B, polypeptide 9. cytochrome P450, family 71, subfamily B, polypeptide 9. member of CYP71B","AT1G15125",null,144.52,1.9289,0.23306,8.2763,{"v":1.27e-16,"d":"1.27E-16"},{"v":3.43e-15,"d":"3.43E-15"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein."]
["AT3G51600","LTP5",152.13,-1.5479,0.19746,-7.8388,{"v":4.55e-15,"d":"4.55E-15"},{"v":1.39e-13,"d":"1.39E-13"},"full_name=lipid transfer protein 5. lipid transfer protein 5. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.","AT5G44340","TUB4",576.09,-1.0078,0.11951,-8.4328,{"v":3.38e-17,"d":"3.38E-17"},{"v":9.97e-16,"d":"9.97E-16"},"full_name=tubulin beta chain 4. tubulin beta chain 4. beta tubulin gene","AT2G16990",null,212.51,-1.828,0.2039,-8.9652,{"v":3.1e-19,"d":"3.10E-19"},{"v":8.87e-18,"d":"8.87E-18"},"Major facilitator superfamily protein.","AT5G57910",null,152.69,-2.1697,0.20071,-10.81,{"v":3.1e-27,"d":"3.10E-27"},{"v":8.58e-26,"d":"8.58E-26"},"ribosomal RNA small subunit methyltransferase G.","AT5G51040","SDHAF2",1261.6,-0.86916,0.10518,-8.2638,1.41E-16,3.81E-15,"full_name=Succinate dehydrogenase assembly factor 2. succinate dehydrogenase assembly factor. Encodes succinate dehydrogenase assembly factor 2 (SDHAF2), a low abundance mitochondrial protein needed for assembly and activity of mitochondrial complex II and for normal root elongation."]
["AT4G25140","OLEO1",183560,0.69844,0.089137,7.8356,{"v":4.67e-15,"d":"4.67E-15"},1.42E-13,"full_name=oleosin 1. oleosin 1. Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.","AT5G12110",null,174.84,-1.5696,0.18621,-8.4294,{"v":3.47e-17,"d":"3.47E-17"},1.02E-15,"elongation factor 1-beta 1.","AT4G33820",null,298.9,-1.3501,0.15061,-8.9639,{"v":3.13e-19,"d":"3.13E-19"},{"v":8.96e-18,"d":"8.96E-18"},"Glycosyl hydrolase superfamily protein.","AT1G15160",null,111.51,-2.8453,0.26353,-10.797,{"v":3.56e-27,"d":"3.56E-27"},{"v":9.84e-26,"d":"9.84E-26"},"MATE efflux family protein.","AT3G02875","ILR1",959.12,-0.75763,0.091686,-8.2633,{"v":1.42e-16,"d":"1.42E-16"},{"v":3.82e-15,"d":"3.82E-15"},"full_name=IAA-LEUCINE RESISTANT 1. Peptidase M20/M25/M40 family protein. Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors."]
["AT1G04560",null,27435,0.71419,0.091186,7.8322,{"v":4.79e-15,"d":"4.79E-15"},{"v":1.46e-13,"d":"1.46E-13"},"AWPM-19-like family protein.","AT4G21960","PRXR1",25950,-0.73934,0.087962,-8.4052,{"v":4.27e-17,"d":"4.27E-17"},1.26E-15,"Peroxidase superfamily protein. Encodes AT4g21960 (AT4g21960/T8O5_170).","AT1G62840",null,62.708,3.171,0.35397,8.9585,{"v":3.29e-19,"d":"3.29E-19"},{"v":9.4e-18,"d":"9.40E-18"},"ankyrin repeat/KH domain protein (DUF1442).","AT2G39140","SVR1",283.19,1.661,0.15394,10.79,{"v":3.82e-27,"d":"3.82E-27"},1.05E-25,"full_name=SUPPRESSOR OF VARIEGATION 1. pseudouridine synthase family protein. Suppressor of var2 variegation phenotype. Chloroplast localized. Loss of function mutant has defects in chloroplast protein translation and rRNA processing. Similar in sequence to pseudouridine synthase proteins.","AT4G25700","BETA-OHASE 1",355.54,1.258,0.15238,8.2556,{"v":1.51e-16,"d":"1.51E-16"},{"v":4.06e-15,"d":"4.06E-15"},"full_name=beta-hydroxylase 1. beta-hydroxylase 1. Converts beta-carotene to zeaxanthin via cryptoxanthin."]
["AT1G23440",null,512.58,1.2129,0.15513,7.819,{"v":5.33e-15,"d":"5.33E-15"},{"v":1.62e-13,"d":"1.62E-13"},"Peptidase C15, pyroglutamyl peptidase I-like protein.","AT3G28153",null,176.76,1.5098,0.17963,8.4048,{"v":4.29e-17,"d":"4.29E-17"},1.26E-15,"transposable_element_gene.","AT3G25110","FaTA",430.49,-1.3597,0.15182,-8.9554,3.38E-19,{"v":9.64e-18,"d":"9.64E-18"},"full_name=fatA acyl-ACP thioesterase. fatA acyl-ACP thioesterase. Encodes a FatA acyl-ACP thioesterase","AT1G73885",null,283.16,1.6718,0.15524,10.769,{"v":4.8E-27,"d":"4.80E-27"},{"v":1.32e-25,"d":"1.32E-25"},"AT-rich interactive domain protein.","AT4G28240","WIP1",564.67,-0.87968,0.10671,-8.244,1.67E-16,{"v":4.47e-15,"d":"4.47E-15"},"Wound-responsive family protein."]
["AT5G13800","PPH",649.01,1.3493,0.17282,7.8076,{"v":5.83e-15,"d":"5.83E-15"},{"v":1.76e-13,"d":"1.76E-13"},"full_name=pheophytinase. pheophytinase. Encodes a pheophytinase that is involved in chlorophyll breakdown. Its transcript levels increase during senescence and pph-1 mutants have a stay-green phenotype.","AT4G21990","2024-04-03",233.99,1.6572,0.19761,8.3863,{"v":5.02e-17,"d":"5.02E-17"},1.47E-15,"full_name=APS reductase 3. APS reductase 3. Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.","AT4G22850",null,136.38,-1.8638,0.20815,-8.954,{"v":3.43e-19,"d":"3.43E-19"},{"v":9.75e-18,"d":"9.75E-18"},"SNARE associated Golgi protein family.","AT3G27660","OLEO4",73959,-0.72062,0.067019,-10.753,5.77E-27,{"v":1.59e-25,"d":"1.59E-25"},"full_name=oleosin 4. oleosin 4. Encodes oleosin4 (Plant Cell, 2006, 18:1961), a protein found in oil bodies, involved in seed lipid accumulation. Functions in freezing tolerance of seeds. Note: also referred to as OLE3 in Plant Journal 2008, 55:798.","AT1G70810","CAR7",1024.8,-0.74422,0.090285,-8.2429,{"v":1.68e-16,"d":"1.68E-16"},{"v":4.5e-15,"d":"4.50E-15"},"Calcium-dependent lipid-binding (CaLB domain) family protein."]
["AT1G76470",null,540.48,-0.93836,0.12034,-7.7976,{"v":6.31e-15,"d":"6.31E-15"},{"v":1.91e-13,"d":"1.91E-13"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT3G49260","iqd21",87.198,-2.2317,0.26626,-8.3818,{"v":5.21e-17,"d":"5.21E-17"},1.53E-15,"full_name=IQ-domain 21. IQ-domain 21.","AT4G09600","GASA3",12081,0.79932,0.089286,8.9524,3.48E-19,{"v":9.88e-18,"d":"9.88E-18"},"full_name=GAST1 protein homolog 3. GAST1 protein homolog 3. One of GASA gene family which is related to a GA-stimulated transcript (GAST) from tomato.","AT5G01600","FER1",145.63,-2.3433,0.21807,-10.746,{"v":6.2e-27,"d":"6.20E-27"},{"v":1.7E-25,"d":"1.70E-25"},"full_name=ferretin 1. ferretin 1. Encodes a ferretin protein that is targeted to the chloroplast. Member of a Ferritin gene family. Gene expression is induced in response to iron overload and by nitric oxide. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.","AT4G33740",null,495.67,-0.98289,0.11944,-8.229,{"v":1.89e-16,"d":"1.89E-16"},{"v":5.05e-15,"d":"5.05E-15"},"myb-like protein X."]
["AT1G10640",null,65.375,-6.9676,0.89592,-7.777,{"v":7.43e-15,"d":"7.43E-15"},2.24E-13,"Pectin lyase-like superfamily protein.","AT5G62500","EB1B",195.39,-1.4218,0.16969,-8.3785,{"v":5.36e-17,"d":"5.36E-17"},{"v":1.57e-15,"d":"1.57E-15"},"full_name=end binding protein 1B. end binding protein 1B. encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis.","AT3G47750","ABCA4",274.41,-1.4247,0.1592,-8.9492,{"v":3.58e-19,"d":"3.58E-19"},1.02E-17,"full_name=ATP-binding cassette A4. ATP binding cassette subfamily A4. member of ATH subfamily","AT1G78780",null,509.88,1.327,0.1235,10.744,{"v":6.32e-27,"d":"6.32E-27"},{"v":1.73e-25,"d":"1.73E-25"},"pathogenesis-related family protein.","AT1G80440","KMD1",88.513,3.2391,0.39363,8.2287,{"v":1.89e-16,"d":"1.89E-16"},{"v":5.05e-15,"d":"5.05E-15"},"Galactose oxidase/kelch repeat superfamily protein. Encodes a member of a family of F-box proteins, called the KISS ME DEADLY (KMD) family, that targets type-B ARR proteins for degradation and is involved in the negative regulation of the cytokinin response. Also named as KFB20, a member of a group of Kelch repeat F-box proteins that negatively regulate phenylpropanoid biosynthesis by targeting the phenypropanoid biosynthesis enzyme phenylalanine ammonia-lyase."]
["AT4G36180","MUL",408.15,-1.2869,0.16565,-7.7689,{"v":7.92e-15,"d":"7.92E-15"},{"v":2.39e-13,"d":"2.39E-13"},"Leucine-rich receptor-like protein kinase family protein.","AT5G66420",null,741.6,0.9351,0.11173,8.3695,{"v":5.79e-17,"d":"5.79E-17"},1.69E-15,"TIM-barrel signal transduction protein.","AT3G56590",null,138.89,-2.0175,0.22567,-8.9402,{"v":3.89e-19,"d":"3.89E-19"},{"v":1.1E-17,"d":"1.10E-17"},"hydroxyproline-rich glycoprotein family protein.","AT1G70800","EHB1",750.34,1.094,0.10187,10.739,{"v":6.67e-27,"d":"6.67E-27"},{"v":1.82e-25,"d":"1.82E-25"},"full_name=ENHANCED BENDING 1. Calcium-dependent lipid-binding (CaLB domain) family protein. Encodes a novel NPH3/phototropin binding factor with a calcium binding domain that negatively affects hypocotyl bending under blue light conditions in Arabidopsis thaliana and may regulate phototropism.","AT5G45310",null,5332.9,-0.60187,0.07322,-8.2199,{"v":2.04e-16,"d":"2.04E-16"},{"v":5.43e-15,"d":"5.43E-15"},"coiled-coil protein."]
["AT1G17810","BETA-TIP",17899,0.73745,0.094989,7.7635,{"v":8.26e-15,"d":"8.26E-15"},2.48E-13,"full_name=beta-tonoplast intrinsic protein. beta-tonoplast intrinsic protein. beta-tonoplast intrinsic protein (beta-TIP) mRNA, complete","AT3G05510",null,332.62,1.2218,0.1461,8.3632,{"v":6.1e-17,"d":"6.10E-17"},{"v":1.78e-15,"d":"1.78E-15"},"Phospholipid/glycerol acyltransferase family protein.","AT2G26080","GLDP2",556.93,-1.406,0.15739,-8.9328,{"v":4.15e-19,"d":"4.15E-19"},{"v":1.17e-17,"d":"1.17E-17"},"full_name=glycine decarboxylase P-protein 2. glycine decarboxylase P-protein 2.","AT3G21550","DMP2",87.193,-4.1517,0.38709,-10.725,{"v":7.74e-27,"d":"7.74E-27"},2.11E-25,"full_name=DUF679 domain membrane protein 2. transmembrane protein, putative (DUF679 domain membrane protein 2).","AT5G01300",null,17712,-0.67792,0.082477,-8.2195,{"v":2.04e-16,"d":"2.04E-16"},5.44E-15,"PEBP (phosphatidylethanolamine-binding protein) family protein."]
["AT5G51560",null,146.42,-1.5944,0.20558,-7.7556,{"v":8.79e-15,"d":"8.79E-15"},{"v":2.64e-13,"d":"2.64E-13"},"Leucine-rich repeat protein kinase family protein.","AT4G11910","NYE2",683.61,0.93081,0.11142,8.3542,{"v":6.59e-17,"d":"6.59E-17"},1.92E-15,"STAY-GREEN-like protein. Acts antagonistically with SGR1 to balance chlorophyll catabolism in chloroplasts with the dismantling and remobilizing of other cellular components in senescing leaf cells.","AT5G01100","FRB1",173.26,-1.9219,0.21517,-8.9317,{"v":4.2e-19,"d":"4.20E-19"},1.18E-17,"full_name=FRIABLE 1. O-fucosyltransferase family protein.","AT2G31840","MRL7-L",127.05,2.6834,0.25029,10.721,{"v":8.12e-27,"d":"8.12E-27"},{"v":2.21e-25,"d":"2.21E-25"},"full_name=Mesophyll-cell RNAi Library line 7-like. Thioredoxin superfamily protein.","AT5G25450",null,399.4,-1.0772,0.13106,-8.2191,2.05E-16,{"v":5.45e-15,"d":"5.45E-15"},"Cytochrome bd ubiquinol oxidase, 14kDa subunit."]
["AT2G23110",null,58.134,2.3867,0.30822,7.7434,{"v":9.68e-15,"d":"9.68E-15"},{"v":2.9e-13,"d":"2.90E-13"},"Late embryogenesis abundant protein, group 6.","AT2G23230",null,99.237,-10.023,1.2005,-8.3496,{"v":6.85e-17,"d":"6.85E-17"},1.99E-15,"Terpenoid cyclases/Protein prenyltransferases superfamily protein.","AT3G55430",null,663.95,1.0305,0.11554,8.9184,{"v":4.73e-19,"d":"4.73E-19"},1.33E-17,"O-Glycosyl hydrolases family 17 protein.","AT3G52880","MDAR1",82.029,-3.8861,0.36262,-10.717,{"v":8.49e-27,"d":"8.49E-27"},{"v":2.31e-25,"d":"2.31E-25"},"full_name=monodehydroascorbate reductase 1. monodehydroascorbate reductase 1. Encodes a peroxisomal monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2","AT5G05860","UGT76C2",49.393,3.5573,0.43319,8.212,{"v":2.18e-16,"d":"2.18E-16"},{"v":5.77e-15,"d":"5.77E-15"},"full_name=UDP-glucosyl transferase 76C2. UDP-glucosyl transferase 76C2. Encodes a cytokinin N-glucosyltransferase that is involved in cytokinin homeostasis and cytokinin response in planta through cytokinin N-glucosylation."]
["AT5G65380",null,1367.2,0.75252,0.097263,7.737,1.02E-14,{"v":3.05e-13,"d":"3.05E-13"},"MATE efflux family protein.","AT5G07330",null,1954.8,1.0341,0.12388,8.3475,{"v":6.97e-17,"d":"6.97E-17"},{"v":2.02e-15,"d":"2.02E-15"},"NFU1 iron-sulfur cluster protein.","AT5G12150","PHGAP1",143.64,-2.1616,0.24244,-8.9163,{"v":4.82e-19,"d":"4.82E-19"},1.36E-17,"Rho GTPase activation protein (RhoGAP) with PH domain-containing protein. Encodes a protein with similarity to REN1, a Rho GTPase activating protein.","AT4G15780","VAMP724",455.05,1.5828,0.14796,10.697,1.05E-26,{"v":2.85e-25,"d":"2.85E-25"},"full_name=vesicle-associated membrane protein 724. vesicle-associated membrane protein 724. member of VAMP72 Gene Family","AT3G58450","USP",21465,-0.51548,0.062808,-8.2072,{"v":2.26e-16,"d":"2.26E-16"},{"v":6e-15,"d":"6.00E-15"},"Adenine nucleotide alpha hydrolases-like superfamily protein."]
["AT4G10060","GLUCOSYLCERAMIDASE",87.534,-1.8672,0.24139,-7.7351,{"v":1.03e-14,"d":"1.03E-14"},3.09E-13,"Beta-glucosidase, GBA2 type family protein.","AT3G51480","GLR3.6",115.58,-1.9048,0.22822,-8.3463,{"v":7.05e-17,"d":"7.05E-17"},2.04E-15,"full_name=glutamate receptor 3.6. glutamate receptor 3.6. member of Putative ligand-gated ion channel subunit family","AT1G63300",null,310.8,-1.3528,0.15174,-8.9151,{"v":4.87e-19,"d":"4.87E-19"},1.37E-17,"Myosin heavy chain-related protein.","AT3G02570","MEE31",1018,-1.0618,0.099374,-10.684,{"v":1.2E-26,"d":"1.20E-26"},{"v":3.27e-25,"d":"3.27E-25"},"full_name=MATERNAL EFFECT EMBRYO ARREST 31. Mannose-6-phosphate isomerase, type I. Encodes a protein with phosphomannose isomerase activity.","AT1G32710",null,607.3,-1.3405,0.16358,-8.1944,2.52E-16,{"v":6.66e-15,"d":"6.66E-15"},"Cytochrome c oxidase, subunit Vib family protein."]
["AT4G27700",null,241.91,-1.2751,0.16485,-7.7346,1.04E-14,3.09E-13,"Rhodanese/Cell cycle control phosphatase superfamily protein.","AT1G53300","TTL1",320.02,-1.2405,0.14919,-8.3149,{"v":9.18e-17,"d":"9.18E-17"},{"v":2.65e-15,"d":"2.65E-15"},"full_name=tetratricopeptide-repeat thioredoxin-like 1. tetratricopetide-repeat thioredoxin-like 1. Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. The TTL family is required for osmotic stress tolerance and male sporogenesis.","AT5G66170","STR18",353.63,-1.4011,0.15719,-8.9139,4.93E-19,{"v":1.38e-17,"d":"1.38E-17"},"full_name=sulfurtransferase 18. sulfurtransferase 18. Encodes a thiosulfate sulfurtransferase/rhodanese.","AT4G12250","GAE5",205.88,-1.8169,0.17009,-10.682,{"v":1.24e-26,"d":"1.24E-26"},{"v":3.35e-25,"d":"3.35E-25"},"full_name=UDP-D-glucuronate 4-epimerase 5. UDP-D-glucuronate 4-epimerase 5. UDP-D-glucuronate 4-epimerase","AT3G22840","ELIP1",317.3,-2.0379,0.24873,-8.1931,2.55E-16,{"v":6.72e-15,"d":"6.72E-15"},"full_name=EARLY LIGHT-INDUCABLE PROTEIN. Chlorophyll A-B binding family protein. Encodes an early light-inducible protein."]
["AT5G23240","DJC76",164.66,-1.4324,0.18536,-7.7275,{"v":1.1E-14,"d":"1.10E-14"},{"v":3.27e-13,"d":"3.27E-13"},"DNAJ heat shock N-terminal domain-containing protein.","AT2G20560","DNAJ",134.92,2.0774,0.25012,8.3055,{"v":9.94e-17,"d":"9.94E-17"},{"v":2.87e-15,"d":"2.87E-15"},"DNAJ heat shock family protein.","AT5G10840","EMP1",214.07,-1.9543,0.21953,-8.9023,{"v":5.47e-19,"d":"5.47E-19"},1.53E-17,"full_name=endomembrane protein 1. Endomembrane protein 70 protein family.","AT2G36500",null,253.83,-1.6193,0.1516,-10.682,{"v":1.24e-26,"d":"1.24E-26"},{"v":3.35e-25,"d":"3.35E-25"},"CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein.","AT5G04250",null,349.55,1.0161,0.12405,8.1906,{"v":2.6e-16,"d":"2.60E-16"},{"v":6.85e-15,"d":"6.85E-15"},"Cysteine proteinases superfamily protein."]
["AT1G12780","UGE1",1188.8,-1.1408,0.14769,-7.7243,{"v":1.12e-14,"d":"1.12E-14"},{"v":3.34e-13,"d":"3.34E-13"},"full_name=UDP-D-glucose/UDP-D-galactose 4-epimerase 1. UDP-D-glucose/UDP-D-galactose 4-epimerase 1. Encodes a UDP-glucose epimerase that catalyzes the interconversion of the sugar nucleotides UDP-glucose UDP-galactose via a UDP-4-keto-hexose intermediate. Responsive to stress.","AT3G45850",null,140.67,-1.6682,0.20097,-8.3005,1.04E-16,{"v":2.99e-15,"d":"2.99E-15"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT3G13310","DJC66",159.58,-1.8943,0.21283,-8.9007,{"v":5.55e-19,"d":"5.55E-19"},{"v":1.55e-17,"d":"1.55E-17"},"Chaperone DnaJ-domain superfamily protein.","AT2G02390","GSTZ1",1130.1,1.1009,0.10309,10.679,1.28E-26,{"v":3.45e-25,"d":"3.45E-25"},"full_name=glutathione S-transferase zeta 1. glutathione S-transferase zeta 1. Encodes glutathione transferase belonging to the zeta class of GSTs. Naming convention according to Wagner et al. (2002). The protein undergoes spontaneous thiolation following treatment with the oxidant tert-butylhydroperoxide. It functions in vitro as a maleylacetoacetate isomerase and is likely to be involved in tyrosine catabolism.","AT1G50010","TUA2",86.252,2.1381,0.2611,8.1891,{"v":2.63e-16,"d":"2.63E-16"},{"v":6.93e-15,"d":"6.93E-15"},"full_name=tubulin alpha-2 chain. tubulin alpha-2 chain. Encodes alpha-2,4 tubulin. TUA2 and TUA4 encode identical proteins."]
["AT4G34980","SLP2",151.6,-1.7981,0.2328,-7.7238,1.13E-14,{"v":3.35e-13,"d":"3.35E-13"},"full_name=subtilisin-like serine protease 2. subtilisin-like serine protease 2. Serine protease similar to subtilisin.","AT5G65750",null,2604.7,0.83937,0.10125,8.2903,{"v":1.13e-16,"d":"1.13E-16"},3.25E-15,"2-oxoglutarate dehydrogenase, E1 component.","AT3G56130","BLP3",156.16,-1.7822,0.20032,-8.8969,{"v":5.74e-19,"d":"5.74E-19"},{"v":1.6e-17,"d":"1.60E-17"},"biotin/lipoyl attachment domain-containing protein.","AT1G20640","NLP4",184.32,1.9945,0.187,10.666,{"v":1.46e-26,"d":"1.46E-26"},{"v":3.94e-25,"d":"3.94E-25"},"Plant regulator RWP-RK family protein.","AT1G74790",null,213.74,1.3255,0.16211,8.1764,{"v":2.93e-16,"d":"2.93E-16"},{"v":7.68e-15,"d":"7.68E-15"},"catalytics."]
["AT5G24165",null,90.652,-1.8777,0.24319,-7.7212,1.15E-14,{"v":3.42e-13,"d":"3.42E-13"},"hypothetical protein.","AT5G42690",null,435.69,1.4394,0.17366,8.2889,1.14E-16,3.28E-15,"transcription factor, putative (Protein of unknown function, DUF547).","AT3G10350","GET3B",1292,1.0086,0.11338,8.8954,{"v":5.82e-19,"d":"5.82E-19"},1.62E-17,"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT1G74840",null,161.36,-2.082,0.1952,-10.666,{"v":1.47e-26,"d":"1.47E-26"},{"v":3.94e-25,"d":"3.94E-25"},"Homeodomain-like superfamily protein.","AT3G58200",null,230.18,-1.2147,0.14857,-8.1763,{"v":2.93e-16,"d":"2.93E-16"},{"v":7.68e-15,"d":"7.68E-15"},"TRAF-like family protein."]
["AT3G59970","MTHFR1",528.03,-0.90787,0.11762,-7.7185,{"v":1.18e-14,"d":"1.18E-14"},{"v":3.48e-13,"d":"3.48E-13"},"full_name=methylenetetrahydrofolate reductase 1. methylenetetrahydrofolate reductase 1. methylenetetrahydrofolate reductase MTHFR1 mRNA, complete","AT2G22010","RKP",365.45,1.1143,0.13447,8.2863,1.17E-16,3.35E-15,"full_name=related to KPC1. related to KPC1. Encodes a protein predicted to act as a RING E3 ubiquitin ligase. It appears to regulate the stability of the KRP1/ICK1 cyclin dependent kinase inhibitor. Induced by beet severe curly virus (BSCTV) C4 protein.","AT2G22470","AGP2",57.721,3.2265,0.36313,8.885,{"v":6.39e-19,"d":"6.39E-19"},{"v":1.78e-17,"d":"1.78E-17"},"full_name=arabinogalactan protein 2. arabinogalactan protein 2. Encodes arabinogalactan-protein (AGP2).","AT1G65840","PAO4",117.86,-2.4988,0.23447,-10.657,1.61E-26,{"v":4.33e-25,"d":"4.33E-25"},"full_name=polyamine oxidase 4. polyamine oxidase 4. encodes a peroxisomal polyamine oxidase, involved in the back-conversion polyamine degradation pathway. Among the five polyamine oxidases in the Arabidopsis genome, PAO4 is the major isoform in root peroxisomes.","AT3G51840","ACX4",971.89,0.65974,0.08073,8.1722,{"v":3.03e-16,"d":"3.03E-16"},{"v":7.93e-15,"d":"7.93E-15"},"full_name=acyl-CoA oxidase 4. acyl-CoA oxidase 4. Encodes a short-chain acyl-CoA oxidase, which catalyzes the first step of peroxisomal fatty acid beta-oxidation during early, post-germinative growth in oilseed species. Null mutants virtually lack short-chain acyl-CoA and are resistant to 2,4-dichlorophenoxybutyric acid, which is converted to the herbicide and auxin analogue 2,4-dichlorophenoxyacetic acid by beta-oxidation. Despite the almost complete loss of short-chain activity, lipid catabolism and seedling growth and establishment was unaltered in the acx4 mutant. However, double mutants in acx3acx4 (acx3 encodes medium chain acyl CoA oxidase) were not viable and arrested during embryogenesis."]
["AT1G04220","KCS2",1188.1,-0.82305,0.10688,-7.7011,{"v":1.35e-14,"d":"1.35E-14"},{"v":3.99e-13,"d":"3.99E-13"},"full_name=3-ketoacyl-CoA synthase 2. 3-ketoacyl-CoA synthase 2. Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT2G39700","EXPA4",108.83,-1.8158,0.21917,-8.2853,{"v":1.18e-16,"d":"1.18E-16"},{"v":3.37e-15,"d":"3.37E-15"},"full_name=expansin A4. expansin A4. putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","AT5G14880","KUP8",107.68,-2.0583,0.23182,-8.8792,6.73E-19,{"v":1.87e-17,"d":"1.87E-17"},"Potassium transporter family protein.","AT1G23010","LPR1",125.6,-2.308,0.21663,-10.654,{"v":1.67e-26,"d":"1.67E-26"},{"v":4.49e-25,"d":"4.49E-25"},"full_name=Low Phosphate Root1. Cupredoxin superfamily protein. Encodes a protein with multicopper oxidase activity. Located in ER. Function together with LPR2 (AT1G71040) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability.","AT1G07470",null,566.49,0.81352,0.099576,8.1698,{"v":3.09e-16,"d":"3.09E-16"},{"v":8.08e-15,"d":"8.08E-15"},"Transcription factor IIA, alpha/beta subunit."]
["AT2G34770","FAH1",93.577,2.0251,0.26325,7.6928,1.44E-14,{"v":4.25e-13,"d":"4.25E-13"},"full_name=fatty acid hydroxylase 1. fatty acid hydroxylase 1. encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death.","AT1G27330",null,647.56,-1.0616,0.1282,-8.2803,1.23E-16,{"v":3.51e-15,"d":"3.51E-15"},"Ribosome associated membrane protein RAMP4.","AT2G45510","CYP704A2",1896.1,1.0516,0.11854,8.8711,{"v":7.25e-19,"d":"7.25E-19"},{"v":2.01e-17,"d":"2.01E-17"},"full_name=cytochrome P450, family 704, subfamily A, polypeptide 2. cytochrome P450, family 704, subfamily A, polypeptide 2. member of CYP704A","AT1G53780",null,2376.1,1.0477,0.098344,10.653,{"v":1.68e-26,"d":"1.68E-26"},{"v":4.5e-25,"d":"4.50E-25"},"26S proteasome regulatory complex ATPase.","AT1G49032",null,812.08,1.2426,0.15219,8.1651,{"v":3.21e-16,"d":"3.21E-16"},{"v":8.37e-15,"d":"8.37E-15"},"hypothetical protein."]
["AT1G07420","SMO2-1",1186.1,0.93247,0.12131,7.6867,1.51E-14,{"v":4.45e-13,"d":"4.45E-13"},"full_name=sterol 4-alpha-methyl-oxidase 2-1. sterol 4-alpha-methyl-oxidase 2-1. Arabidopsis thaliana sterol 4-alpha-methyl-oxidase mRNA","AT2G13610","ABCG5",149.78,-1.7352,0.20991,-8.2665,1.38E-16,{"v":3.94e-15,"d":"3.94E-15"},"full_name=ATP-binding cassette G5. ABC-2 type transporter family protein.","AT2G26640","KCS11",74.802,-3.1734,0.35785,-8.8679,{"v":7.46e-19,"d":"7.46E-19"},{"v":2.06e-17,"d":"2.06E-17"},"full_name=3-ketoacyl-CoA synthase 11. 3-ketoacyl-CoA synthase 11. Encodes KCS11, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT1G15500","ATNTT2",628.37,1.136,0.10664,10.653,{"v":1.69e-26,"d":"1.69E-26"},{"v":4.51e-25,"d":"4.51E-25"},"TLC ATP/ADP transporter.","AT4G20320","CTPS4",161.31,1.4831,0.18164,8.1651,{"v":3.21e-16,"d":"3.21E-16"},{"v":8.37e-15,"d":"8.37E-15"},"CTP synthase family protein."]
["AT3G06850","BCE2",474.93,-0.9602,0.12494,-7.6851,{"v":1.53e-14,"d":"1.53E-14"},{"v":4.5E-13,"d":"4.50E-13"},"2-oxoacid dehydrogenases acyltransferase family protein. dihydrolipoamide branched chain acyltransferase","AT5G50170",null,1052,0.88709,0.10747,8.2542,1.53E-16,{"v":4.36e-15,"d":"4.36E-15"},"C2 calcium/lipid-binding and GRAM domain containing protein.","AT1G27040","NPF4.5",155.84,-1.9315,0.21794,-8.8625,{"v":7.82e-19,"d":"7.82E-19"},{"v":2.16e-17,"d":"2.16E-17"},"Major facilitator superfamily protein.","AT4G32910","SBB1",472.73,1.3494,0.12672,10.649,{"v":1.77e-26,"d":"1.77E-26"},{"v":4.72e-25,"d":"4.72E-25"},"nuclear pore complex Nup85-like protein.","AT3G18600",null,1090.8,-0.67876,0.083144,-8.1636,{"v":3.25e-16,"d":"3.25E-16"},{"v":8.46e-15,"d":"8.46E-15"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein."]
["AT2G21260",null,541.35,-1.0145,0.13206,-7.6823,{"v":1.56e-14,"d":"1.56E-14"},{"v":4.58e-13,"d":"4.58E-13"},"NAD(P)-linked oxidoreductase superfamily protein.","AT1G08630","THA1",1967.2,-0.69426,0.084142,-8.251,{"v":1.57e-16,"d":"1.57E-16"},{"v":4.47e-15,"d":"4.47E-15"},"full_name=threonine aldolase 1. threonine aldolase 1. Encodes a threonine aldolase, involved in threonine degradation to glycine. Primarily expressed in seeds and seedlings.","AT4G33140",null,239.1,-1.4109,0.15923,-8.8609,{"v":7.94e-19,"d":"7.94E-19"},{"v":2.19e-17,"d":"2.19E-17"},"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein.","AT5G06390","FLA17",64.827,-5.1465,0.48346,-10.645,1.84E-26,{"v":4.89e-25,"d":"4.89E-25"},"full_name=FASCICLIN-like arabinogalactan protein 17 precursor. FASCICLIN-like arabinogalactan protein 17 precursor.","AT3G60160","ABCC9",182.15,1.4473,0.17745,8.1565,{"v":3.45e-16,"d":"3.45E-16"},{"v":8.96e-15,"d":"8.96E-15"},"full_name=ATP-binding cassette C9. multidrug resistance-associated protein 9. member of MRP subfamily"]
["AT1G22160",null,175.39,-1.605,0.20914,-7.6743,1.66E-14,{"v":4.87e-13,"d":"4.87E-13"},"senescence-associated family protein (DUF581).","AT5G13140",null,44.125,-3.5585,0.43135,-8.2496,1.59E-16,{"v":4.51e-15,"d":"4.51E-15"},"Pollen Ole e 1 allergen and extensin family protein.","AT4G16140",null,60.652,-3.242,0.36621,-8.853,{"v":8.52e-19,"d":"8.52E-19"},2.35E-17,"proline-rich family protein.","AT5G07440","GDH2",141.6,-2.2768,0.2139,-10.644,{"v":1.85e-26,"d":"1.85E-26"},{"v":4.92e-25,"d":"4.92E-25"},"full_name=glutamate dehydrogenase 2. glutamate dehydrogenase 2. Encodes the beta-subunit of the glutamate dehydrogenase. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.","AT1G59860","HSP17.6A",56.761,-2.8135,0.34534,-8.1469,3.73E-16,{"v":9.68e-15,"d":"9.68E-15"},"HSP20-like chaperones superfamily protein."]
["AT5G40230","UMAMIT37",117.5,-1.6834,0.21952,-7.6688,1.74E-14,{"v":5.08e-13,"d":"5.08E-13"},"full_name=Usually multiple acids move in and out Transporters 37. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT1G07500","SMR5",153.28,1.8432,0.22353,8.2455,1.64E-16,4.66E-15,"hypothetical protein.","AT5G43450",null,147.8,2.2854,0.25826,8.8491,{"v":8.82e-19,"d":"8.82E-19"},{"v":2.42e-17,"d":"2.42E-17"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. encodes a protein whose sequence is similar to ACC oxidase","AT1G57770",null,106.2,-2.4549,0.23075,-10.639,{"v":1.97e-26,"d":"1.97E-26"},{"v":5.22e-25,"d":"5.22E-25"},"FAD/NAD(P)-binding oxidoreductase family protein.","AT3G23920","BAM1",5242.9,0.49273,0.060493,8.1453,{"v":3.78e-16,"d":"3.78E-16"},{"v":9.8e-15,"d":"9.80E-15"},"full_name=beta-amylase 1. beta-amylase 1. Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3."]
["AT1G07750",null,455.71,-1.1102,0.14485,-7.664,{"v":1.8e-14,"d":"1.80E-14"},{"v":5.26e-13,"d":"5.26E-13"},"RmlC-like cupins superfamily protein.","AT1G73290","scpl5",78.139,-2.4422,0.29687,-8.2263,{"v":1.93e-16,"d":"1.93E-16"},{"v":5.46e-15,"d":"5.46E-15"},"full_name=serine carboxypeptidase-like 5. serine carboxypeptidase-like 5.","AT3G18090","NRPD2B",53.181,-3.8266,0.43245,-8.8486,{"v":8.87e-19,"d":"8.87E-19"},{"v":2.43e-17,"d":"2.43E-17"},"full_name=nuclear RNA polymerase D2B. nuclear RNA polymerase D2B. Encodes a subunit of RNA polymerase IV (aka RNA polymerase D). NRPD2b is closely related to NRPD2a, but has lower levels of transcription and does not affect endogenous siRNA when mutated.","AT1G21000","PLATZ1",3305.1,1.0859,0.10215,10.63,{"v":2.15e-26,"d":"2.15E-26"},{"v":5.71e-25,"d":"5.71E-25"},"PLATZ transcription factor family protein.","AT2G35800","SAMTL",281.53,1.124,0.13803,8.1428,{"v":3.86e-16,"d":"3.86E-16"},{"v":9.98e-15,"d":"9.98E-15"},"full_name=S-adenosyl methionine transporter-like. mitochondrial substrate carrier family protein. Encodes a predicted calcium-dependent S-adenosyl methionine carrier."]
["AT4G27530",null,54.324,2.5921,0.33889,7.6489,{"v":2.03e-14,"d":"2.03E-14"},{"v":5.91e-13,"d":"5.91E-13"},"hypothetical protein.","AT2G24280",null,188.33,-1.3806,0.16798,-8.2191,2.05E-16,{"v":5.79e-15,"d":"5.79E-15"},"alpha/beta-Hydrolases superfamily protein.","AT4G04890","PDF2",1010.5,-1.1909,0.1346,-8.8478,{"v":8.93e-19,"d":"8.93E-19"},2.44E-17,"full_name=protodermal factor 2. protodermal factor 2. Encodes a homeodomain protein that is expressed in the LI layer of the vegetative, floral and inflorescence meristems. Binds to the L1 box promoter element which is required in some proteins for L1 specific expression.","AT5G56980",null,95.516,-2.9662,0.27906,-10.629,{"v":2.18e-26,"d":"2.18E-26"},{"v":5.77e-25,"d":"5.77E-25"},"cotton fiber protein.","AT5G35525",null,68.314,-2.5632,0.31482,-8.1419,{"v":3.89e-16,"d":"3.89E-16"},{"v":1E-14,"d":"1.00E-14"},"PLAC8 family protein."]
["AT4G33270","CDC20.1",41.668,-3.0436,0.39847,-7.6381,{"v":2.2e-14,"d":"2.20E-14"},{"v":6.42e-13,"d":"6.42E-13"},"full_name=cell division cycle 20.1. Transducin family protein / WD-40 repeat family protein. Encodes a CDC20 protein that interacts with APC subunits, components of the mitochondrial checkpoint complex and mitotic cyclin substrates and is indispensable for normal plant development and fertility.","AT1G07473",null,113.44,1.9964,0.24296,8.217,{"v":2.09e-16,"d":"2.09E-16"},{"v":5.89e-15,"d":"5.89E-15"},"hypothetical protein.","AT4G12700",null,367.04,-1.5327,0.17331,-8.8437,{"v":9.26e-19,"d":"9.26E-19"},{"v":2.53e-17,"d":"2.53E-17"},"calcium ion-binding protein.","AT3G16640","TCTP",3429.8,0.90103,0.0849,10.613,{"v":2.6e-26,"d":"2.60E-26"},{"v":6.87e-25,"d":"6.87E-25"},"full_name=translationally controlled tumor protein. translationally controlled tumor protein. Encodes a protein homologous to translationally controlled tumor protein (TCTP) from Drosophila. In flies, TCTP functions guanine nucleotide exchange factor in the TOR signaling pathway. TCTP is expressed throughout the plant with highest levels seen in meristematic regions of the shoot and root. Loss of function alleles are not transmitted through the male gametophyte due to defects in pollen tube growth. Hypomorphs, generated through RNAi, are dwarf and have smaller cells. These plants also have defects in lateral and primary root growth as well as root hair growth. The phenotypes are similar to TOR mutants suggesting that TCTP functions in the is pathway in Arabidopsis as well.","AT1G80410","EMB2753",1114.4,0.67974,0.083522,8.1385,{"v":4e-16,"d":"4.00E-16"},{"v":1.03e-14,"d":"1.03E-14"},"full_name=EMBRYO DEFECTIVE 2753. tetratricopeptide repeat (TPR)-containing protein."]
["AT3G56360",null,249.23,1.1312,0.1482,7.6327,{"v":2.3E-14,"d":"2.30E-14"},{"v":6.66e-13,"d":"6.66E-13"},"hypothetical protein.","AT5G44310",null,7274.3,1.0063,0.12251,8.2142,2.14E-16,6.02E-15,"Late embryogenesis abundant protein (LEA) family protein.","AT5G58330","NADP-MDH",507.86,1.3242,0.14976,8.842,{"v":9.4e-19,"d":"9.40E-19"},2.57E-17,"lactate/malate dehydrogenase family protein.","AT1G63820",null,183.88,-2.0625,0.19439,-10.61,{"v":2.68e-26,"d":"2.68E-26"},{"v":7.07e-25,"d":"7.07E-25"},"CCT motif family protein.","AT5G03340","AtCDC48C",1418,0.64355,0.079079,8.1381,{"v":4.02e-16,"d":"4.02E-16"},{"v":1.03e-14,"d":"1.03E-14"},"full_name=cell division cycle 48C. ATPase, AAA-type, CDC48 protein."]
["AT2G02100","LCR69",1048.6,-1.545,0.20242,-7.6327,{"v":2.3E-14,"d":"2.30E-14"},{"v":6.66e-13,"d":"6.66E-13"},"full_name=low-molecular-weight cysteine-rich 69. low-molecular-weight cysteine-rich 69. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","AT2G36880","MAT3",1120.9,-1.0238,0.12472,-8.2093,{"v":2.22e-16,"d":"2.22E-16"},{"v":6.25e-15,"d":"6.25E-15"},"full_name=methionine adenosyltransferase 3. methionine adenosyltransferase 3.","AT4G22290","SHOU4L2",206.14,-1.4895,0.16853,-8.8385,{"v":9.7e-19,"d":"9.70E-19"},{"v":2.64e-17,"d":"2.64E-17"},"Ubiquitin-specific protease family C19-related protein.","AT4G32520","SHM3",476.76,1.3567,0.12789,10.609,{"v":2.71e-26,"d":"2.71E-26"},7.13E-25,"full_name=serine hydroxymethyltransferase 3. serine hydroxymethyltransferase 3. Encodes a serine hydroxymethyltransferase SHMT3 located in the plastid.","AT1G67090","RBCS1A",163.87,1.5524,0.19096,8.1295,4.31E-16,1.11E-14,"full_name=ribulose bisphosphate carboxylase small chain 1A. ribulose bisphosphate carboxylase small chain 1A. Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410). Functions to yield sufficient Rubisco content for leaf photosynthetic capacity."]
["AT1G72040","dNK",455.48,0.97246,0.12741,7.6326,{"v":2.3E-14,"d":"2.30E-14"},{"v":6.66e-13,"d":"6.66E-13"},"full_name=deoxyribonucleoside kinase. P-loop containing nucleoside triphosphate hydrolases superfamily protein. Encodes a multisubstrate deoxyribonucleoside kinase that salvages DNA precursors.","AT5G19340",null,164,-1.5178,0.18529,-8.1912,{"v":2.59e-16,"d":"2.59E-16"},{"v":7.26e-15,"d":"7.26E-15"},"hypothetical protein.","AT4G04840","MSRB6",4234.3,-0.93546,0.10588,-8.8352,{"v":9.99e-19,"d":"9.99E-19"},2.72E-17,"full_name=methionine sulfoxide reductase B6. methionine sulfoxide reductase B6.","AT4G14890","FdC1",76.104,3.5718,0.33682,10.604,2.84E-26,7.47E-25,"full_name=ferredoxin C 1. 2Fe-2S ferredoxin-like superfamily protein.","AT3G45830",null,660.76,0.78793,0.09704,8.1196,{"v":4.68e-16,"d":"4.68E-16"},{"v":1.2e-14,"d":"1.20E-14"},"nuclear factor kappa-B-binding-like protein."]
["AT1G27760","SAT32",996.8,0.76422,0.10025,7.6229,{"v":2.48e-14,"d":"2.48E-14"},{"v":7.18e-13,"d":"7.18E-13"},"full_name=SALT-TOLERANCE 32. interferon-related developmental regulator family protein / IFRD protein family. Encodes a protein with similarity to human interferon-related developmental regulator (IFRD)that is involved in salt tolerance. Loss of function mutations are hypersensitive to salt stress and have reduced fertility. SAT32 is found in the cytoplasm but appears to translocate to the nucleus when plants are subject to salt stress.","AT5G54300",null,152.02,1.4865,0.18159,8.1862,{"v":2.7E-16,"d":"2.70E-16"},7.55E-15,"cotton fiber-like protein (DUF761).","AT5G53660","GRF7",207.79,1.6538,0.18728,8.8306,{"v":1.04e-18,"d":"1.04E-18"},{"v":2.83e-17,"d":"2.83E-17"},"full_name=growth-regulating factor 7. growth-regulating factor 7. Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower.","AT4G31890",null,62.898,-4.4946,0.42405,-10.599,{"v":3e-26,"d":"3.00E-26"},{"v":7.89e-25,"d":"7.89E-25"},"ARM repeat superfamily protein.","AT5G42830",null,57.476,6.258,0.77127,8.1139,{"v":4.9e-16,"d":"4.90E-16"},1.25E-14,"HXXXD-type acyl-transferase family protein."]
["AT5G14130",null,222.46,-1.2426,0.16324,-7.612,{"v":2.7e-14,"d":"2.70E-14"},{"v":7.79e-13,"d":"7.79E-13"},"Peroxidase superfamily protein.","AT1G24764","MAP70-2",214.63,-1.2964,0.15843,-8.183,{"v":2.77e-16,"d":"2.77E-16"},{"v":7.75e-15,"d":"7.75E-15"},"full_name=microtubule-associated proteins 70-2. microtubule-associated proteins 70-2. Member of the MAP70 protein family.","AT5G62490","HVA22B",7542.6,0.83843,0.094947,8.8304,{"v":1.04e-18,"d":"1.04E-18"},{"v":2.83e-17,"d":"2.83E-17"},"full_name=HVA22 homologue B. HVA22 homologue B. Part of the AtHVA22 family. Protein expression is ABA- and stress-inducible.","AT3G32930",null,248.49,1.9278,0.1821,10.587,3.43E-26,{"v":8.99e-25,"d":"8.99E-25"},"6,7-dimethyl-8-ribityllumazine synthase.","AT2G36350","AGC1-9",1058.7,0.64816,0.079914,8.1107,{"v":5.03e-16,"d":"5.03E-16"},{"v":1.29e-14,"d":"1.29E-14"},"Protein kinase superfamily protein."]
["AT1G75640","MUS",106.26,-2.5337,0.33286,-7.6119,{"v":2.7e-14,"d":"2.70E-14"},{"v":7.79e-13,"d":"7.79E-13"},"Leucine-rich receptor-like protein kinase family protein.","AT5G55480","SVL1",576.86,-1.0176,0.12437,-8.182,2.79E-16,{"v":7.8e-15,"d":"7.80E-15"},"full_name=SHV3-like 1. SHV3-like 1. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development.","AT4G34050","CCoAOMT1",1451.2,-1.1295,0.12792,-8.8296,1.05E-18,{"v":2.84e-17,"d":"2.84E-17"},"full_name=caffeoyl coenzyme A O-methyltransferase 1. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT3G04190",null,353.64,-8.3802,0.79212,-10.579,{"v":3.71e-26,"d":"3.71E-26"},{"v":9.71e-25,"d":"9.71E-25"},"RmlC-like cupins superfamily protein.","AT3G48690","CXE12",359.68,0.98572,0.1216,8.106,{"v":5.23e-16,"d":"5.23E-16"},{"v":1.33e-14,"d":"1.33E-14"},"alpha/beta-Hydrolases superfamily protein. Encodes a protein with carboxylesterase whose activity was tested using both pNA and 2,4-D-methyl."]
["AT1G77580","VETH3",347.29,-1.4838,0.19501,-7.6091,2.76E-14,{"v":7.95e-13,"d":"7.95E-13"},"filament-like protein (DUF869).","AT4G38660",null,39.359,-4.1691,0.50958,-8.1814,{"v":2.81e-16,"d":"2.81E-16"},{"v":7.82e-15,"d":"7.82E-15"},"Pathogenesis-related thaumatin superfamily protein.","AT2G36380","ABCG34",1912.3,-1.0301,0.11682,-8.8181,1.16E-18,3.15E-17,"full_name=ATP-binding cassette G34. pleiotropic drug resistance 6.","AT1G70700","TIFY7",76.8,-4.2249,0.39946,-10.577,{"v":3.83e-26,"d":"3.83E-26"},{"v":1e-24,"d":"1.00E-24"},"TIFY domain/Divergent CCT motif family protein. JAZ9 is a protein presumed to be involved in jasmonate signaling. JAZ9 transcript levels rise in response to a jasmonate stimulus. JAZ9 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. The Jas domain appears to be important for JAZ9-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.","AT5G66880","SNRK2.3",889.18,0.7312,0.090361,8.092,{"v":5.87e-16,"d":"5.87E-16"},{"v":1.49e-14,"d":"1.49E-14"},"full_name=sucrose nonfermenting 1(SNF1)-related protein kinase 2.3. sucrose nonfermenting 1(SNF1)-related protein kinase 2.3. encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Enzyme involved in the ABA signaling during seed germination, dormancy and seedling growth."]
["AT5G24590","TIP",1558,1.0368,0.13658,7.5913,3.17E-14,{"v":9.11e-13,"d":"9.11E-13"},"full_name=TCV-interacting protein. TCV-interacting protein. Member of NAc protein family. Interacts with turnip crinkle virus (TCV) capsid protein. Transcription factor involved in regulating the defense response of Arabidopsis to TCV.","AT4G39330","CAD9",52.254,-2.8251,0.34572,-8.1716,{"v":3.04e-16,"d":"3.04E-16"},{"v":8.47e-15,"d":"8.47E-15"},"full_name=cinnamyl alcohol dehydrogenase 9. cinnamyl alcohol dehydrogenase 9.","AT1G78380","GSTU19",1272.9,0.99684,0.11308,8.8157,1.19E-18,3.21E-17,"full_name=glutathione S-transferase TAU 19. glutathione S-transferase TAU 19. Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.","AT2G35300","LEA18",9728.5,1.6758,0.15846,10.576,3.86E-26,{"v":1.01e-24,"d":"1.01E-24"},"full_name=late embryogenesis abundant 18. Late embryogenesis abundant protein, group 1 protein. Encodes LEA4-2/LEA18, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment.","AT1G65980","TPX1",6327,-0.45857,0.056693,-8.0887,{"v":6.03e-16,"d":"6.03E-16"},{"v":1.53e-14,"d":"1.53E-14"},"full_name=thioredoxin-dependent peroxidase 1. thioredoxin-dependent peroxidase 1. thioredoxin-dependent peroxidase"]
["AT2G28080",null,108,-1.644,0.21668,-7.5871,{"v":3.27e-14,"d":"3.27E-14"},{"v":9.39e-13,"d":"9.39E-13"},"UDP-Glycosyltransferase superfamily protein.","AT5G61490",null,55.381,2.7819,0.34112,8.1551,3.49E-16,{"v":9.7e-15,"d":"9.70E-15"},"transmembrane protein.","AT1G65670","CYP702A1",440.11,-2.1146,0.23988,-8.8155,1.19E-18,3.21E-17,"full_name=cytochrome P450, family 702, subfamily A, polypeptide 1. cytochrome P450, family 702, subfamily A, polypeptide 1. a member of the cytochrome P450 gene family. molecular function unknown.","AT3G11660","NHL1",76.139,-5.8004,0.54866,-10.572,{"v":4.03e-26,"d":"4.03E-26"},1.05E-24,"full_name=NDR1/HIN1-like 1. NDR1/HIN1-like 1. encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus. Localization of the gene product is similar to that of NHL3 (plasma membrane) but it is yet inconclusive.","AT5G01820","SR1",213.25,-1.2666,0.15667,-8.0845,{"v":6.24e-16,"d":"6.24E-16"},1.59E-14,"full_name=serine/threonine protein kinase 1. serine/threonine protein kinase 1. Encodes a CBL-interacting serine/threonine protein kinase."]
["AT1G24360","KR",2309.2,-0.73882,0.097411,-7.5846,{"v":3.34e-14,"d":"3.34E-14"},{"v":9.55e-13,"d":"9.55E-13"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT5G04885","BGLC3",1113.2,0.90373,0.1109,8.149,3.67E-16,1.02E-14,"Glycosyl hydrolase family protein.","AT1G08470","SSL3",91.262,-2.1633,0.24542,-8.8147,{"v":1.2E-18,"d":"1.20E-18"},{"v":3.23e-17,"d":"3.23E-17"},"full_name=strictosidine synthase-like 3. strictosidine synthase-like 3. Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.","AT5G02490","Hsp70-2",83.595,-3.3099,0.31381,-10.547,{"v":5.22e-26,"d":"5.22E-26"},1.36E-24,"Heat shock protein 70 (Hsp 70) family protein.","AT1G71528",null,102.74,-1.8378,0.22756,-8.0762,{"v":6.68e-16,"d":"6.68E-16"},{"v":1.69e-14,"d":"1.69E-14"},"Natural antisense transcript overlaps with AT1G71530. Potential natural antisense gene, locus overlaps with AT1G71530 Natural antisense transcript overlaps with AT1G71530"]
["AT5G52420","PRCE3",755.77,0.82811,0.10922,7.5819,{"v":3.41e-14,"d":"3.41E-14"},{"v":9.74e-13,"d":"9.74E-13"},"transmembrane protein.","AT3G18600",null,745.09,1.1184,0.1373,8.1457,{"v":3.77e-16,"d":"3.77E-16"},1.04E-14,"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT2G43710","SSI2",2716.7,-1.2678,0.14392,-8.8089,1.26E-18,3.39E-17,"full_name=suppressor of SA insensitive 2. Plant stearoyl-acyl-carrier-protein desaturase family protein. Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates.","AT4G39840",null,171.33,-2.2937,0.21752,-10.545,{"v":5.37e-26,"d":"5.37E-26"},{"v":1.39e-24,"d":"1.39E-24"},"cell wall integrity/stress response component-like protein.","AT1G03030",null,1118,-0.63572,0.078724,-8.0753,{"v":6.73e-16,"d":"6.73E-16"},{"v":1.7E-14,"d":"1.70E-14"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein."]
["AT3G01680","SEOR1",58.421,2.3987,0.3164,7.5811,{"v":3.43e-14,"d":"3.43E-14"},{"v":9.79e-13,"d":"9.79E-13"},"full_name=Sieve-Element-Occlusion-Related 1. sieve element occlusion amino-terminus protein. Encodes a protein localized to phloem filaments that is required for phloem filament formation.","AT1G52920","GPCR",51.915,2.6816,0.32945,8.1395,{"v":3.97e-16,"d":"3.97E-16"},{"v":1.1E-14,"d":"1.10E-14"},"full_name=G protein coupled receptor. G protein coupled receptor. Encodes a plasma membrane%E2%80%93localized ABA receptor, which interacts with the G&#945;&#946;&#947; complex. It has been postulated that the binding of ABA to GCR2 results in the release of the G protein and dissociation of the heterotrimeric complex into G&#945; and the G&#946;&#947; dimer to activate downstream ABA effectors and to trigger the ABA responses.","AT1G63180","UGE3",135.43,1.9274,0.21885,8.8071,{"v":1.28e-18,"d":"1.28E-18"},3.45E-17,"full_name=UDP-D-glucose/UDP-D-galactose 4-epimerase 3. UDP-D-glucose/UDP-D-galactose 4-epimerase 3. Encodes a protein with UDP-D-glucose 4-epimerase activity. Involved in pollen development.","AT4G16640","AT1-MMP",73.051,-3.658,0.34774,-10.519,{"v":7.04e-26,"d":"7.04E-26"},1.82E-24,"Matrixin family protein.","AT3G03490","PEX19-1",1227.4,-0.66185,0.08198,-8.0733,{"v":6.84e-16,"d":"6.84E-16"},{"v":1.73e-14,"d":"1.73E-14"},"full_name=peroxin 19-1. peroxin 19-1. Encodes one of two PEX19 peroxin isoforms. It is predominantly cytosolic and forms dimers."]
["AT1G70830","MLP28",39.42,-5.4759,0.72313,-7.5724,{"v":3.66e-14,"d":"3.66E-14"},1.04E-12,"full_name=MLP-like protein 28. MLP-like protein 28.","AT3G63200","PLP9",98.419,-2.2162,0.2724,-8.1359,{"v":4.09e-16,"d":"4.09E-16"},1.13E-14,"full_name=PATATIN-like protein 9. PATATIN-like protein 9.","AT5G06839","TGA10",103.98,1.9325,0.21944,8.8064,{"v":1.29e-18,"d":"1.29E-18"},{"v":3.46e-17,"d":"3.46E-17"},"full_name=TGACG (TGA) motif-binding protein 10. bZIP transcription factor family protein.","AT3G48980",null,118.16,-2.637,0.25068,-10.519,{"v":7.05e-26,"d":"7.05E-26"},1.82E-24,"O-glucosyltransferase rumi-like protein (DUF821).","AT1G07180","NDA1",371.04,-1.0977,0.13602,-8.0702,{"v":7.02e-16,"d":"7.02E-16"},1.77E-14,"full_name=alternative NAD(P)H dehydrogenase 1. alternative NAD(P)H dehydrogenase 1. Internal NAD(P)H dehydrogenase in mitochondria. The predicted protein sequence has high homology with other designated NAD(P)H DHs from microorganisms; the capacity for matrix NAD(P)H oxidation via the rotenone-insensitive pathway is significantly reduced in the Atndi1 mutant plant line; the in vitro translation product of AtNDI1 is imported into isolated mitochondria and located on the inside of the inner membrane."]
["AT1G32080","LrgB",70.202,-2.1594,0.28538,-7.5667,{"v":3.83e-14,"d":"3.83E-14"},1.09E-12,"membrane protein. Encodes a plant LrgAB/CidAB protein localized to the chloroplast envelope that is involved in chloroplast development, carbon partitioning and leaf senescence. The gene may have evolved from gene fusion of bacterial lrgA and lrgB.","AT3G03520","NPC3",81.111,2.033,0.25031,8.122,{"v":4.58e-16,"d":"4.58E-16"},1.26E-14,"full_name=non-specific phospholipase C3. non-specific phospholipase C3. Lysophosphatidic acid phosphatase highly expressed during phosphate starvation and abiotic stresses. Role in lipid synthesis.","AT2G29300",null,890.58,1.5239,0.17314,8.8014,{"v":1.35e-18,"d":"1.35E-18"},{"v":3.61e-17,"d":"3.61E-17"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT4G28390","AAC3",999.74,1.1933,0.11346,10.518,{"v":7.16e-26,"d":"7.16E-26"},{"v":1.85e-24,"d":"1.85E-24"},"full_name=ADP/ATP carrier 3. ADP/ATP carrier 3. Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).","AT1G23440",null,777.86,-0.80379,0.099675,-8.0642,{"v":7.37e-16,"d":"7.37E-16"},{"v":1.86e-14,"d":"1.86E-14"},"Peptidase C15, pyroglutamyl peptidase I-like protein."]
["AT5G03640","AGC1-8",110.93,1.7452,0.23073,7.5637,3.92E-14,{"v":1.11e-12,"d":"1.11E-12"},"Protein kinase superfamily protein.","AT5G13670","UMAMIT15",43.202,-3.3164,0.40835,-8.1215,4.61E-16,1.27E-14,"full_name=Usually multiple acids move in and out Transporters 15. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT1G48130","PER1",36703,0.87743,0.099797,8.7921,{"v":1.47e-18,"d":"1.47E-18"},{"v":3.92e-17,"d":"3.92E-17"},"full_name=1-cysteine peroxiredoxin 1. 1-cysteine peroxiredoxin 1. encodes a protein similar to the 1-cysteine (1-Cys) peroxiredoxin family of antioxidants. Expression is limited to seed (aleurone and embryo) and is not induced by ABA or drought.","AT1G68010","HPR",168.57,2.4152,0.22979,10.51,{"v":7.73e-26,"d":"7.73E-26"},{"v":2e-24,"d":"2.00E-24"},"full_name=hydroxypyruvate reductase. hydroxypyruvate reductase. Encodes hydroxypyruvate reductase.","AT5G67250","SKIP2",395.86,0.96158,0.1193,8.0605,{"v":7.6e-16,"d":"7.60E-16"},{"v":1.91e-14,"d":"1.91E-14"},"full_name=SKP1/ASK1-interacting protein 2. SKP1/ASK1-interacting protein 2. Encodes an SKP1 interacting partner (SKIP2).Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB1,2, and 3. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes."]
["AT1G56170","NF-YC2",1343.9,-0.73684,0.097533,-7.5548,{"v":4.19e-14,"d":"4.19E-14"},1.19E-12,"full_name=nuclear factor Y, subunit C2. nuclear factor Y, subunit C2. Encodes a protein with similarity to a subunit of the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5B) and expressed in vegetative and reproductive tissues","AT3G24770","CLE41",63.722,-2.466,0.30388,-8.1151,{"v":4.86e-16,"d":"4.86E-16"},{"v":1.33e-14,"d":"1.33E-14"},"full_name=CLAVATA3/ESR-RELATED 41. CLAVATA3/ESR-RELATED 41. Belongs to a large gene family, called CLE for CLAVATA3/ESR-related, encoding small peptides with conserved carboxyl termini. The C-terminal 12 amino acid sequence of CLE41 is identical to that of a dodeca peptide (TDIF, tracheary element differentiation inhibitory factor) isolated from Arabidopsis and functions as a suppressor of plant stem cell differentiation. TDIF sequence is also identical to the C-terminal 12 amino acids of CLE44 (At4g13195). The protein is expressed in the vascular system and is involved in axillary bud formation.","AT4G01250","WRKY22",189.69,1.5321,0.17433,8.7886,{"v":1.51e-18,"d":"1.51E-18"},{"v":4.03e-17,"d":"4.03E-17"},"WRKY family transcription factor. AtWRKY22 is a member of WRKY Transcription Factor; Group II-e. It is involved in regulation of dark induced leaf senescence.","AT4G03400","DFL2",204.43,-1.9183,0.18257,-10.507,{"v":8e-26,"d":"8.00E-26"},2.06E-24,"full_name=DWARF IN LIGHT 2. Auxin-responsive GH3 family protein. Encodes a GH3-related gene involved in red light-specific hypocotyl elongation. Analysis of sense and antisense transgenic plants suggests that DFL2 is located downstream of red light signal transduction and determines the degree of hypocotyl elongation.","AT2G38410",null,657.03,0.77919,0.096685,8.0591,{"v":7.69e-16,"d":"7.69E-16"},1.93E-14,"ENTH/VHS/GAT family protein."]
["AT2G29630","THIC",1014.3,-0.76921,0.10196,-7.544,{"v":4.56e-14,"d":"4.56E-14"},1.29E-12,"full_name=thiaminC. thiaminC. Encodes a protein involved in thiamine biosynthesis. The protein is an iron-sulfur cluster protein predicted to catalyze the conversion of 5-aminoimidazole ribonucleotide (AIR) to hydroxymethylpyrimidine phosphate (HMP-P). A severe reduction of THIC levels in plants decreases vitamin B1 (thiamin diphosphate (TPP)) levels and also leads to changes in the levels of numerous other metabolites since so many primary metabolic enzymes require a TPP co-factor. thiC mutants are chlorotic and arrest in their development at the cotyledon stage. A N-terminal targeting sequence directs the THIC protein to the chloroplast stroma. The THIC transcript is regulated by a TPP riboswitch in the 3' UTR. THIC transcripts are observed in seedlings 5 or more days after germination, and light promotes the expression of this gene.","AT1G74310","HSP101",2224.4,1.0984,0.13538,8.1135,{"v":4.92e-16,"d":"4.92E-16"},{"v":1.35e-14,"d":"1.35E-14"},"full_name=heat shock protein 101. heat shock protein 101. Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.","AT1G23800","ALDH2B7",489.82,1.2179,0.13861,8.7863,1.55E-18,{"v":4.11e-17,"d":"4.11E-17"},"full_name=aldehyde dehydrogenase 2B7. aldehyde dehydrogenase 2B7. Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product.","AT1G07610","MT1C",116.35,-3.3268,0.31695,-10.496,{"v":9.01e-26,"d":"9.01E-26"},2.32E-24,"full_name=metallothionein 1C. metallothionein 1C. one of the five metallothioneins (MTs) genes identified in Arabidopsis. MTs are cysteine-rich proteins required for heavy metal tolerance.","AT2G25980",null,110.32,2.1523,0.2671,8.0583,{"v":7.73e-16,"d":"7.73E-16"},{"v":1.94e-14,"d":"1.94E-14"},"Mannose-binding lectin superfamily protein."]
["AT1G80300","NTT1",545.83,-0.95451,0.12684,-7.5252,{"v":5.26e-14,"d":"5.26E-14"},{"v":1.49e-12,"d":"1.49E-12"},"full_name=nucleotide transporter 1. nucleotide transporter 1. Encodes an ATP/ADP transporter.","AT5G12250","TUB6",157.4,-1.4835,0.18305,-8.1042,{"v":5.31e-16,"d":"5.31E-16"},{"v":1.45e-14,"d":"1.45E-14"},"full_name=beta-6 tubulin. beta-6 tubulin. Encodes a beta-tubulin. Expression of TUB6 has been shown to decrease in response to cold treatment.","AT5G48880","KAT5",253.09,-1.4141,0.16098,-8.7847,{"v":1.57e-18,"d":"1.57E-18"},{"v":4.16e-17,"d":"4.16E-17"},"full_name=3-KETO-ACYL-COENZYME A THIOLASE 5. peroxisomal 3-keto-acyl-CoA thiolase 2. Encodes a peroxisomal 3-keto-acyl-CoA thiolase 2 precursor. EC2.3.1.16 thiolases. AT5G48880.1 is named PKT1 and AT5G48880.2 is named PKT2.","AT3G45780","PHOT1",746.11,1.7894,0.17055,10.492,{"v":9.37e-26,"d":"9.37E-26"},{"v":2.41e-24,"d":"2.41E-24"},"full_name=phototropin 1. phototropin 1. Blue-light photoreceptor. Contains a light activated serine-threonine kinase domain and LOV1 and LOV2 repeats. Mutants are defective in blue-light response. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT1 undergoes blue-light-dependent autophosphorylation. At least eight phosphorylation sites have been identified in PHOT1. Phosphorylation of serine851 in the activation loop of PHOT1 appears to be required for stomatal opening, chloroplast accumulation, leaf flattening, and phototropism, and phosphorylation of serine849 may also contribute to the regulation of these responses. Phosphorylation-dependent binding of 14-3-3 proteins to the Hinge1 region of PHOT1 appears to require serine350 and serine376.","AT5G24160","SQE6",328.1,1.592,0.19758,8.0571,{"v":7.81e-16,"d":"7.81E-16"},1.96E-14,"full_name=squalene monoxygenase 6. squalene monooxygenase 6."]
["AT2G46130","WRKY43",92.674,-2.0966,0.27863,-7.5248,5.28E-14,{"v":1.49e-12,"d":"1.49E-12"},"full_name=WRKY DNA-binding protein 43. WRKY DNA-binding protein 43. member of WRKY Transcription Factor; Group II-c","AT5G65010","ASN2",156.9,-1.5363,0.1898,-8.0944,{"v":5.76e-16,"d":"5.76E-16"},{"v":1.57e-14,"d":"1.57E-14"},"full_name=asparagine synthetase 2. asparagine synthetase 2. Encodes asparagine synthetase (ASN2).","AT2G01450","MPK17",907.46,1.0616,0.12087,8.7833,1.59E-18,{"v":4.21e-17,"d":"4.21E-17"},"full_name=MAP kinase 17. MAP kinase 17. member of MAP Kinase","AT1G22370","UGT85A5",311.33,1.8044,0.17199,10.491,{"v":9.52e-26,"d":"9.52E-26"},{"v":2.44e-24,"d":"2.44E-24"},"full_name=UDP-glucosyl transferase 85A5. UDP-glucosyl transferase 85A5.","AT5G40880",null,105.94,2.2291,0.27678,8.0535,{"v":8.04e-16,"d":"8.04E-16"},{"v":2.01e-14,"d":"2.01E-14"},"WD-40 repeat family protein / zfwd3 protein (ZFWD3)."]
["AT1G26560","BGLU40",510.77,-0.96893,0.12883,-7.5213,5.43E-14,{"v":1.53e-12,"d":"1.53E-12"},"full_name=beta glucosidase 40. beta glucosidase 40.","AT5G19730",null,333.8,-1.2218,0.15111,-8.0853,{"v":6.2e-16,"d":"6.20E-16"},{"v":1.69e-14,"d":"1.69E-14"},"Pectin lyase-like superfamily protein.","AT3G17240","mtLPD2",957.39,1.0543,0.12007,8.7806,1.63E-18,4.31E-17,"full_name=lipoamide dehydrogenase 2. lipoamide dehydrogenase 2. lipoamide dehydrogenase precursor","AT1G17310","AGL100",77.601,-5.6841,0.54183,-10.491,{"v":9.53e-26,"d":"9.53E-26"},{"v":2.44e-24,"d":"2.44E-24"},"MADS-box transcription factor family protein.","AT2G43520","TI2",100.9,-1.8392,0.2284,-8.0528,{"v":8.09e-16,"d":"8.09E-16"},{"v":2.02e-14,"d":"2.02E-14"},"full_name=trypsin inhibitor protein 2. trypsin inhibitor protein 2. Encodes putative trypsin inhibitor protein which may function in defense against herbivory. Member of the defensin-like (DEFL) family."]
["AT2G30010","TBL45",61.748,-2.2139,0.29445,-7.5187,{"v":5.53e-14,"d":"5.53E-14"},1.56E-12,"full_name=TRICHOME BIREFRINGENCE-LIKE 45. TRICHOME BIREFRINGENCE-LIKE 45. Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT1G33490",null,619.82,0.92477,0.11438,8.0852,{"v":6.21e-16,"d":"6.21E-16"},{"v":1.69e-14,"d":"1.69E-14"},"E3 ubiquitin-protein ligase.","AT5G56540","AGP14",2384.5,-1.1808,0.13458,-8.7745,{"v":1.72e-18,"d":"1.72E-18"},{"v":4.54e-17,"d":"4.54E-17"},"full_name=arabinogalactan protein 14. arabinogalactan protein 14. Encodes arabinogalactan protein (AGP14). Mutants exhibit longer root hairs.","AT5G37670","HSP15.7",417.25,1.5078,0.14378,10.487,{"v":9.96e-26,"d":"9.96E-26"},{"v":2.54e-24,"d":"2.54E-24"},"HSP20-like chaperones superfamily protein.","AT5G43600","UAH",986.13,-0.76449,0.094981,-8.0489,{"v":8.35e-16,"d":"8.35E-16"},2.08E-14,"full_name=ureidoglycolate amidohydrolase. ureidoglycolate amidohydrolase. Encodes a protein with ureidoglycolate amidohydrolase activity in vitro. It is 27% identical and 43% similar to the E. coli allantoate amidohydrolase (AAH), but, in vitro assays with purified protein and allantoate as a substrate do not show any increase in ammonium concentration, indicating that there this enzyme has no AAH activity."]
["AT1G77855",null,35.713,-3.9917,0.53246,-7.4967,{"v":6.54e-14,"d":"6.54E-14"},{"v":1.84e-12,"d":"1.84E-12"},"BPS1-like protein.","AT1G56330","SAR1B",511.67,-0.94687,0.11745,-8.0617,{"v":7.53e-16,"d":"7.53E-16"},{"v":2.05e-14,"d":"2.05E-14"},"full_name=secretion-associated RAS 1B. secretion-associated RAS 1B. Encodes a small GTP-binding protein implicated in ER to cis-Golgi transport of other proteins. A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. The protein is found associated to the ER and free in the cytosol.","AT5G50360","AITR5",1562.7,1.0138,0.11565,8.7662,{"v":1.85e-18,"d":"1.85E-18"},{"v":4.88e-17,"d":"4.88E-17"},"von willebrand factor A domain protein.","AT3G06980",null,229.09,1.7234,0.16437,10.485,1.01E-25,2.59E-24,"DEA(D/H)-box RNA helicase family protein.","AT5G59540",null,142.42,-1.7409,0.21632,-8.0478,{"v":8.43e-16,"d":"8.43E-16"},{"v":2.1e-14,"d":"2.10E-14"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein."]
["AT1G65230",null,90.901,-1.7295,0.23082,-7.4927,{"v":6.75e-14,"d":"6.75E-14"},{"v":1.89e-12,"d":"1.89E-12"},"transmembrane protein, putative (DUF2358).","AT3G56130","BLP3",431.29,-1.0268,0.12739,-8.0597,{"v":7.65e-16,"d":"7.65E-16"},2.08E-14,"biotin/lipoyl attachment domain-containing protein.","AT3G27870","ALA8",942.49,1.4406,0.16436,8.7645,1.88E-18,{"v":4.94e-17,"d":"4.94E-17"},"ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein.","AT3G03770",null,185.9,-2.4125,0.23018,-10.481,1.06E-25,{"v":2.69e-24,"d":"2.69E-24"},"Leucine-rich repeat protein kinase family protein.","AT3G10740","ASD1",648.9,0.78708,0.097825,8.0458,{"v":8.57e-16,"d":"8.57E-16"},{"v":2.13e-14,"d":"2.13E-14"},"full_name=alpha-L-arabinofuranosidase 1. alpha-L-arabinofuranosidase 1. Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 51 of glycoside hydrolases. It may be involved in cell wall modification."]
["AT3G05190",null,1185.9,0.83148,0.111,7.4907,{"v":6.85e-14,"d":"6.85E-14"},{"v":1.92e-12,"d":"1.92E-12"},"D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein.","AT1G27120","GALT4",301.85,-1.1698,0.14523,-8.0547,{"v":7.97e-16,"d":"7.97E-16"},{"v":2.16e-14,"d":"2.16E-14"},"Galactosyltransferase family protein.","AT3G11620",null,112.18,-2.1561,0.24631,-8.7536,{"v":2.07e-18,"d":"2.07E-18"},5.44E-17,"alpha/beta-Hydrolases superfamily protein.","AT4G18220",null,248.57,1.9163,0.18289,10.478,{"v":1.09e-25,"d":"1.09E-25"},{"v":2.78e-24,"d":"2.78E-24"},"Drug/metabolite transporter superfamily protein.","AT5G50170",null,6844.6,0.66273,0.082377,8.0451,8.62E-16,{"v":2.14e-14,"d":"2.14E-14"},"C2 calcium/lipid-binding and GRAM domain containing protein."]
["AT1G08820","VAP27-2",691.49,-0.94763,0.12662,-7.4842,{"v":7.2e-14,"d":"7.20E-14"},{"v":2.01e-12,"d":"2.01E-12"},"full_name=vamp/synaptobrevin-associated protein 27-2. vamp/synaptobrevin-associated protein 27-2. Encodes VAP33-like protein that interacts with cowpea mosaic virus protein 60K. Is a SNARE-like protein that may be involved in vesicular transport to or from the ER.","AT1G58807",null,149.88,-1.5368,0.19095,-8.0482,{"v":8.4e-16,"d":"8.40E-16"},{"v":2.28e-14,"d":"2.28E-14"},"Disease resistance protein (CC-NBS-LRR class) family.","AT3G63410","APG1",247.39,-1.5751,0.17999,-8.751,{"v":2.12e-18,"d":"2.12E-18"},{"v":5.56e-17,"d":"5.56E-17"},"full_name=ALBINO OR PALE GREEN MUTANT 1. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis.","AT1G20450","ERD10",84.596,-4.6267,0.44165,-10.476,{"v":1.11e-25,"d":"1.11E-25"},{"v":2.83e-24,"d":"2.83E-24"},"full_name=EARLY RESPONSIVE TO DEHYDRATION 10. Dehydrin family protein. Encodes a gene induced by low temperature and dehydration. Inhibits e.coli growth while overexpressed. Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. LTI29 and LTI30 double overexpressors confer cold tolerance. Localized to membranes and cytoplasm.","AT5G22880","HTB2",243.89,-1.1834,0.14718,-8.0402,{"v":8.97e-16,"d":"8.97E-16"},{"v":2.22e-14,"d":"2.22E-14"},"full_name=histone B2. histone B2. Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases."]
["AT2G46750","GulLO2",33.837,5.3803,0.71919,7.4811,{"v":7.37e-14,"d":"7.37E-14"},{"v":2.06e-12,"d":"2.06E-12"},"full_name=L -gulono-1,4-lactone ( L -GulL) oxidase 2. D-arabinono-1,4-lactone oxidase family protein. Encodes a homolog of rat L-gulono-1,4-lactone (L-GulL) oxidase that is involved in the biosynthesis of L-ascorbic acid.","AT1G59124",null,149.73,-1.5427,0.19189,-8.0395,{"v":9.02e-16,"d":"9.02E-16"},{"v":2.44e-14,"d":"2.44E-14"},"Disease resistance protein (CC-NBS-LRR class) family.","AT5G51550","EXL3",162.04,-2.1511,0.24582,-8.7508,{"v":2.12e-18,"d":"2.12E-18"},{"v":5.56e-17,"d":"5.56E-17"},"full_name=EXORDIUM like 3. EXORDIUM like 3.","AT4G25960","ABCB2",148.57,-2.3753,0.22679,-10.473,1.14E-25,{"v":2.9e-24,"d":"2.90E-24"},"full_name=ATP-binding cassette B2. P-glycoprotein 2.","AT4G04840","MSRB6",88.513,-2.183,0.27167,-8.0355,{"v":9.32e-16,"d":"9.32E-16"},{"v":2.3E-14,"d":"2.30E-14"},"full_name=methionine sulfoxide reductase B6. methionine sulfoxide reductase B6."]
["AT2G15010",null,8664.6,0.73556,0.098335,7.4802,{"v":7.42e-14,"d":"7.42E-14"},{"v":2.07e-12,"d":"2.07E-12"},"Plant thionin. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.","AT3G25870",null,306.35,1.299,0.16158,8.0394,{"v":9.02e-16,"d":"9.02E-16"},{"v":2.44e-14,"d":"2.44E-14"},"hypothetical protein.","AT3G12920","BRG3",714.75,1.3999,0.16001,8.7484,{"v":2.16e-18,"d":"2.16E-18"},{"v":5.67e-17,"d":"5.67E-17"},"full_name=BOI-related gene 3. SBP (S-ribonuclease binding protein) family protein. Encodes one of the BRGs (BOI-related gene) involved in resistance to Botrytis cinerea.","AT5G56100",null,990.88,1.6674,0.15925,10.47,{"v":1.19e-25,"d":"1.19E-25"},{"v":3E-24,"d":"3.00E-24"},"glycine-rich protein / oleosin.","AT3G23400","FIB4",382.36,-1.0156,0.12648,-8.0296,{"v":9.78e-16,"d":"9.78E-16"},2.41E-14,"full_name=fibrillin 4. Plastid-lipid associated protein PAP / fibrillin family protein. Encodes FIBRILLIN 4 (FIB4). The fibrillins are a large family of chloroplast proteins that have been linked with stress tolerance and disease resistance. FIBRILLIN 4 is required for plastoglobule development and stress resistance."]
["AT1G13990",null,282.37,1.3905,0.18609,7.4724,{"v":7.87e-14,"d":"7.87E-14"},{"v":2.19e-12,"d":"2.19E-12"},"plant/protein.","AT4G16210","ECHIA",628.4,0.90568,0.11276,8.0319,{"v":9.6e-16,"d":"9.60E-16"},{"v":2.59e-14,"d":"2.59E-14"},"full_name=enoyl-CoA hydratase/isomerase A. enoyl-CoA hydratase/isomerase A.","AT5G09300",null,295.06,-1.3522,0.15464,-8.744,2.25E-18,{"v":5.88e-17,"d":"5.88E-17"},"Thiamin diphosphate-binding fold (THDP-binding) superfamily protein.","AT3G19680",null,90.681,-3.5505,0.33915,-10.469,{"v":1.2E-25,"d":"1.20E-25"},{"v":3.03e-24,"d":"3.03E-24"},"hypothetical protein (DUF1005).","AT4G24800","ECIP1",1018,0.69761,0.086885,8.0292,{"v":9.81e-16,"d":"9.81E-16"},2.42E-14,"full_name=EIN2 C-terminus Interacting Protein 1. MA3 domain-containing protein."]
["AT3G52840","BGAL2",167.95,1.6654,0.22293,7.4704,{"v":7.99e-14,"d":"7.99E-14"},{"v":2.22e-12,"d":"2.22E-12"},"full_name=beta-galactosidase 2. beta-galactosidase 2.","AT5G43630","TZP",300.92,1.4085,0.17554,8.0238,1.03E-15,2.76E-14,"zinc knuckle (CCHC-type) family protein. Encodes a zinc knuckle protein that negatively regulates morning specific growth. The role of TZP in hypocotyl elongation was established through a QTL analysis of BayXSha RIL populations. The Bay-0 allele contains a deletion causing a frameshift mutation. TZP is under circadian control and acts to regulate morning-specific hypocotyl growth.","AT2G25080","GPX1",546.15,1.2743,0.14575,8.7428,{"v":2.27e-18,"d":"2.27E-18"},{"v":5.94e-17,"d":"5.94E-17"},"full_name=glutathione peroxidase 1. glutathione peroxidase 1. Encodes glutathione peroxidase.","AT5G01210",null,105.63,-2.7748,0.26537,-10.456,1.37E-25,{"v":3.47e-24,"d":"3.47E-24"},"HXXXD-type acyl-transferase family protein.","AT4G04830","MSRB5",64.655,-2.946,0.36692,-8.029,9.83E-16,2.42E-14,"full_name=methionine sulfoxide reductase B5. methionine sulfoxide reductase B5."]
["AT5G07190","ATS3",27052,0.61762,0.08278,7.461,{"v":8.58e-14,"d":"8.58E-14"},2.38E-12,"full_name=seed gene 3. embryo-specific protein 3. Gene is expressed preferentially in the embryo and encodes a unique protein of unknown function.","AT3G21760","HYR1",162.96,-1.4759,0.18397,-8.0223,{"v":1.04e-15,"d":"1.04E-15"},2.79E-14,"full_name=HYPOSTATIN RESISTANCE 1. UDP-Glycosyltransferase superfamily protein. Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside.","AT4G13050","FATA2",53.443,-3.2695,0.37406,-8.7407,2.32E-18,{"v":6.04e-17,"d":"6.04E-17"},"Acyl-ACP thioesterase.","AT5G01800",null,150.07,-2.2621,0.2165,-10.449,{"v":1.49e-25,"d":"1.49E-25"},3.75E-24,"saposin B domain-containing protein.","AT5G52450",null,91.571,2.2814,0.28435,8.0234,1.03E-15,2.53E-14,"MATE efflux family protein."]
["AT3G22200","POP2",506.33,-0.89803,0.12045,-7.4554,{"v":8.96e-14,"d":"8.96E-14"},{"v":2.48e-12,"d":"2.48E-12"},"full_name=POLLEN-PISTIL INCOMPATIBILITY 2. Pyridoxal phosphate (PLP)-dependent transferases superfamily protein. Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.","AT2G16570","ASE1",89.219,1.8762,0.23389,8.0216,{"v":1.04e-15,"d":"1.04E-15"},{"v":2.8e-14,"d":"2.80E-14"},"full_name=GLN phosphoribosyl pyrophosphate amidotransferase 1. GLN phosphoribosyl pyrophosphate amidotransferase 1. Amidophosphoribosyltransferase (ATase: EC 2.4.2.14) is a key enzyme in the pathway of purine nucleotide biosynthesis","AT3G27330",null,99.235,2.2141,0.25367,8.7283,{"v":2.59e-18,"d":"2.59E-18"},{"v":6.73e-17,"d":"6.73E-17"},"zinc finger (C3HC4-type RING finger) family protein.","AT2G23110",null,3284.5,1.0401,0.099563,10.446,1.53E-25,{"v":3.84e-24,"d":"3.84E-24"},"Late embryogenesis abundant protein, group 6.","AT5G07830","GUS2",1345.6,-0.66751,0.083269,-8.0164,1.09E-15,{"v":2.67e-14,"d":"2.67E-14"},"full_name=glucuronidase 2. glucuronidase 2. Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-&#946;-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be membrane-associated. It is involved in cell elongation."]
["AT2G43680","IQD14",1780.2,-0.67068,0.089988,-7.453,9.13E-14,{"v":2.53e-12,"d":"2.53E-12"},"full_name=IQ-domain 14. IQ-domain 14.","AT4G32570","TIFY8",112.44,-1.743,0.21751,-8.0136,{"v":1.11e-15,"d":"1.11E-15"},{"v":2.99e-14,"d":"2.99E-14"},"full_name=TIFY domain protein 8. TIFY domain protein 8.","AT4G16370","OPT3",466.99,-1.5781,0.18087,-8.7251,{"v":2.66e-18,"d":"2.66E-18"},{"v":6.91e-17,"d":"6.91E-17"},"full_name=oligopeptide transporter. oligopeptide transporter. Encodes an oligopeptide transporter involved in metal homeostasis. It loads iron into the phloem, facilitates iron recirculation from the xylem to the phloem, and regulates both shoot-to-root iron signaling and iron redistribution from mature to developing tissues.","AT3G22400","LOX5",108.04,-6.9257,0.66311,-10.444,{"v":1.56e-25,"d":"1.56E-25"},{"v":3.91e-24,"d":"3.91E-24"},"PLAT/LH2 domain-containing lipoxygenase family protein. Encodes lipoxygenase5 (LOX5). LOX5 activity in roots facilitates green peach aphid colonization of Arabidopsis foliage by promoting green peach aphid feeding from sieve element and water consumption from xylem.","AT2G43500","NLP8",2085.1,-0.73431,0.091661,-8.0111,1.14E-15,{"v":2.78e-14,"d":"2.78E-14"},"Plant regulator RWP-RK family protein."]
["AT3G44880","ACD1",1100.2,0.72323,0.097052,7.452,{"v":9.19e-14,"d":"9.19E-14"},{"v":2.54e-12,"d":"2.54E-12"},"full_name=ACCELERATED CELL DEATH 1. Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein. Encodes a pheide a oxygenase (PAO). Accelerated cell death (acd1) mutants show rapid, spreading necrotic responses to both virulent and avirulent Pseudomonas syringae pv. maculicola or pv. tomato pathogens and to ethylene.","AT4G34890","XDH1",1268.2,0.7114,0.08893,7.9996,1.25E-15,{"v":3.34e-14,"d":"3.34E-14"},"full_name=xanthine dehydrogenase 1. xanthine dehydrogenase 1. Encodes a xanthine dehydrogenase, involved in purine catabolism. Ubiquitously expressed, but the transcript level is altered during aging, senescence, salt and cold stress, ABA treatment, and dark treatment. RNAi lines that suppress both XDH1 and XDH2 produce small plants with reduced fertility and accelerated leaf senescence. Role in drought tolerance.","AT4G00430","PIP1;4",757.31,-1.2258,0.14056,-8.7209,2.76E-18,{"v":7.16e-17,"d":"7.16E-17"},"full_name=plasma membrane intrinsic protein 1;4. plasma membrane intrinsic protein 1;4. a member of the plasma membrane intrinsic protein subfamily PIP1.","AT1G27950","LTPG1",1339.6,-1.7862,0.17124,-10.431,{"v":1.8E-25,"d":"1.80E-25"},{"v":4.5e-24,"d":"4.50E-24"},"full_name=glycosylphosphatidylinositol-anchored lipid protein transfer 1. glycosylphosphatidylinositol-anchored lipid protein transfer 1. Encodes LTPG1, a lipid transfer protein with a predicted GPI (glycosylphosphatidylinositol)-anchor domain. Localized in the plasma membrane. Disruption of the LTPG1 gene causes alterations of cuticular lipid composition, but no significant changes on total wax and cutin monomer loads are seen.","AT5G44250",null,333.6,1.0802,0.13493,8.0057,1.19E-15,{"v":2.91e-14,"d":"2.91E-14"},"peptidase, S9A/B/C family, catalytic domain protein (Protein of unknown function DUF829, transmembrane 53)."]
["AT5G05390","LAC12",34.211,-4.3858,0.5887,-7.4499,{"v":9.34e-14,"d":"9.34E-14"},{"v":2.58e-12,"d":"2.58E-12"},"full_name=laccase 12. laccase 12. putative laccase, a member of laccase family of genes (17 members in Arabidopsis).","AT4G28510","PHB1",227.98,1.2715,0.15905,7.9945,{"v":1.3E-15,"d":"1.30E-15"},{"v":3.48e-14,"d":"3.48E-14"},"full_name=prohibitin 1. prohibitin 1. prohibitin 1 (Atphb1)","AT5G10070",null,429.1,1.2233,0.14029,8.7195,{"v":2.8e-18,"d":"2.80E-18"},{"v":7.24e-17,"d":"7.24E-17"},"RNase L inhibitor protein-like protein.","AT4G26220","CCOAOMT7",64.589,-4.3009,0.4135,-10.401,2.45E-25,{"v":6.15e-24,"d":"6.15E-24"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. Encodes a caffeoyl-coenzyme A O-methyltransferase (CCoAOMT)-like protein with a strong preference for methylating the para position of flavanones and dihydroflavonols, whereas flavones and flavonols are methylated in the meta-position.","AT4G01100","ADNT1",750.35,0.78926,0.098681,7.9981,1.26E-15,3.09E-14,"full_name=adenine nucleotide transporter 1. adenine nucleotide transporter 1."]
["AT3G13520","AGP12",692.85,1.1113,0.14926,7.4452,{"v":9.68e-14,"d":"9.68E-14"},{"v":2.67e-12,"d":"2.67E-12"},"full_name=arabinogalactan protein 12. arabinogalactan protein 12. Encodes a GPI-anchored arabinogalactan (AG) peptide with a short 'classical' backbone of 10 amino acids, seven of which are conserved among the 4 other Arabidopsis AG peptides. These peptides may be involved in cell signaling.","AT1G06390","GSK1",319.04,-1.0735,0.13436,-7.9897,1.35E-15,{"v":3.61e-14,"d":"3.61E-14"},"full_name=GSK3/SHAGGY-like protein kinase 1. GSK3/SHAGGY-like protein kinase 1. encodes a GSK3/shaggy-like protein kinase. Gene expression is induced by NaCl and ABA but not KCl, suggesting that this gene may be involved in response to osmotic stress. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts.","AT2G18360",null,144.44,-2.3569,0.27063,-8.709,{"v":3.07e-18,"d":"3.07E-18"},{"v":7.93e-17,"d":"7.93E-17"},"alpha/beta-Hydrolases superfamily protein.","AT5G12020","HSP17.6II",77.073,3.4168,0.32885,10.39,2.75E-25,{"v":6.88e-24,"d":"6.88E-24"},"full_name=17.6 kDa class II heat shock protein. 17.6 kDa class II heat shock protein.","AT4G36690","ATU2AF65A",1730,-0.93143,0.11652,-7.9938,1.31E-15,{"v":3.19e-14,"d":"3.19E-14"},"U2 snRNP auxilliary factor, large subunit, splicing factor."]
["AT1G15690","AVP1",2632.4,0.70476,0.094857,7.4297,1.09E-13,2.99E-12,"Inorganic H pyrophosphatase family protein. Encodes a H(+)-translocating (pyrophosphate-energized) inorganic pyrophosphatase (H(+)-PPase; EC 3.6.1.1) located in the vacuolar membrane. Expression is found in all tissues examined, including meristems and floral organ primordium. Expression is particularly enhanced in pollen, and is repressed by light. Over expression and loss of function phenotypes suggest AVP1 is involved in regulation of apoplastic pH and auxin transport. The effect on auxin transport likely involves effects of extracellular pH on subcellular localization of auxin efflux carriers such as PIN1.","AT5G19740","LAMP1",92.334,-1.9843,0.24843,-7.9876,{"v":1.38e-15,"d":"1.38E-15"},{"v":3.67e-14,"d":"3.67E-14"},"Peptidase M28 family protein.","AT4G34250","KCS16",186.49,-2.2627,0.25984,-8.7083,{"v":3.09e-18,"d":"3.09E-18"},{"v":7.97e-17,"d":"7.97E-17"},"full_name=3-ketoacyl-CoA synthase 16. 3-ketoacyl-CoA synthase 16. Encodes KCS16, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT5G09670",null,59.836,-4.1944,0.40399,-10.383,{"v":2.98e-25,"d":"2.98E-25"},{"v":7.43e-24,"d":"7.43E-24"},"loricrin-like protein.","AT4G29330","DER1",528.62,-0.89749,0.11232,-7.9904,1.35E-15,{"v":3.27e-14,"d":"3.27E-14"},"full_name=DERLIN-1. DERLIN-1."]
["AT5G02550",null,70.946,-2.1463,0.28895,-7.4281,{"v":1.1E-13,"d":"1.10E-13"},{"v":3.03e-12,"d":"3.03E-12"},"hypothetical protein.","AT1G67040","TRM22",97.791,-1.8129,0.227,-7.9863,{"v":1.39e-15,"d":"1.39E-15"},{"v":3.7E-14,"d":"3.70E-14"},"full_name=TON1 Recruiting Motif 22. DnaA initiator-associating protein.","AT4G04955","ALN",290.53,-1.6226,0.18634,-8.7074,3.11E-18,{"v":8.02e-17,"d":"8.02E-17"},"full_name=allantoinase. allantoinase. Encodes an allantoinase which is involved in allantoin degradation and assimilation. Gene expression was induced when allantoin was added to the medium. The insertion mutant, ataln m2-1, did not grow well on the MS medium where allantoin, instead of ammonium nitrate, was supplied.","AT4G30550","GGP3",247.55,-1.6393,0.15801,-10.374,3.24E-25,{"v":8.08e-24,"d":"8.08E-24"},"full_name=gamma-glutamyl peptidase 3. Class I glutamine amidotransferase-like superfamily protein.","AT1G56450","PBG1",597.69,-0.78315,0.098091,-7.9839,1.42E-15,{"v":3.45e-14,"d":"3.45E-14"},"full_name=20S proteasome beta subunit G1. 20S proteasome beta subunit G1. 20S proteasome beta subunit PBG1 (PBG1) mRNA, complete cds"]
["AT1G62080","TBA3",72396,1.1969,0.1613,7.4203,{"v":1.17e-13,"d":"1.17E-13"},{"v":3.21e-12,"d":"3.21E-12"},"transmembrane protein.","AT5G36160","TAT2",1009.2,-0.80145,0.10058,-7.9686,{"v":1.61e-15,"d":"1.61E-15"},{"v":4.26e-14,"d":"4.26E-14"},"Tyrosine transaminase family protein. Encodes an L-tyrosine aminotransferase.","AT1G27350",null,972.99,-1.0429,0.11993,-8.6959,{"v":3.44e-18,"d":"3.44E-18"},{"v":8.87e-17,"d":"8.87E-17"},"Ribosome associated membrane protein RAMP4.","AT3G62720","XT1",79.667,-2.9681,0.2861,-10.374,3.24E-25,{"v":8.08e-24,"d":"8.08E-24"},"full_name=xylosyltransferase 1. xylosyltransferase 1. Encodes a protein with xylosyltransferase activity, which is specific for UDP-xylose as donor substrate and for oligosaccharides with a degree of polymerization >4. Although the enzyme utilizes either cellopentaose or cellohexaose, its activity is four-fold higher with cellohexaose as an acceptor compared to cellopentaose. The enzyme is able to add several xylosyl residues to the acceptor forming mono-, di- and trixylosylated polysaccharides.","AT1G17010",null,4605.5,-0.6526,0.08176,-7.9819,{"v":1.44e-15,"d":"1.44E-15"},{"v":3.5e-14,"d":"3.50E-14"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein."]
["AT1G47840","HXK3",488.41,-1.2099,0.16329,-7.4091,{"v":1.27e-13,"d":"1.27E-13"},{"v":3.48e-12,"d":"3.48E-12"},"full_name=hexokinase 3. hexokinase 3. Encodes a putative hexokinase.","AT4G20820","ATBBE18",65.925,2.656,0.33332,7.9683,{"v":1.61e-15,"d":"1.61E-15"},{"v":4.27e-14,"d":"4.27E-14"},"FAD-binding Berberine family protein.","AT5G50170",null,2097.1,1.3811,0.15887,8.6933,{"v":3.52e-18,"d":"3.52E-18"},{"v":9.05e-17,"d":"9.05E-17"},"C2 calcium/lipid-binding and GRAM domain containing protein.","AT4G34320",null,66.201,-4.8539,0.46827,-10.366,3.56E-25,{"v":8.84e-24,"d":"8.84E-24"},"transmembrane protein, putative (DUF677).","AT1G06290","ACX3",2121.5,0.66843,0.083783,7.9782,1.49E-15,{"v":3.6e-14,"d":"3.60E-14"},"full_name=acyl-CoA oxidase 3. acyl-CoA oxidase 3. Encodes an acyl-CoA oxidase with specificity for medium chain fatty acids."]
["AT1G54870",null,3860.4,4.3212,0.58336,7.4074,{"v":1.29e-13,"d":"1.29E-13"},{"v":3.52e-12,"d":"3.52E-12"},"NAD(P)-binding Rossmann-fold superfamily protein. ChlADR is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on saturated and alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. The N-terminal region of this protein directs GFP to the chloroplast where where ChlADR likely helps to maintain the photosynthetic process by detoxifying reactive carbonyls formed during lipid peroxidation. In addition, this enzyme can also reduce cis-3-hexenal, a major plant volatile compound that contributes to green leaf odor, as well as methylglyoxal in vitro.","AT2G17780","MCA2",212.95,1.3588,0.17064,7.9629,{"v":1.68e-15,"d":"1.68E-15"},4.45E-14,"full_name=mid1-complementing activity 2. PLAC8 family protein.","AT1G79840","GL2",212.3,-2.0951,0.24145,-8.6773,4.05E-18,1.04E-16,"full_name=GLABRA 2. HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein. Glabra 2, a homeodomain protein affects epidermal cell identity including trichomes, root hairs, and seed coat. It also down-regulates seed oil content. Expressed in atrichoblasts and required to suppress root hair development. Also expressed abundantly during early seed development. Directly regulated by WER.","AT1G06000","UGT89C1",132.56,-2.328,0.22472,-10.359,{"v":3.8e-25,"d":"3.80E-25"},{"v":9.43e-24,"d":"9.43E-24"},"UDP-Glycosyltransferase superfamily protein. encodes a flavonol-7-O-rhamnosyltransferase involved in the formation of rhamnosylated flavonols","AT3G55630","DFD",40.583,4.5339,0.56893,7.9692,{"v":1.6E-15,"d":"1.60E-15"},{"v":3.86e-14,"d":"3.86E-14"},"full_name=DHFS-FPGS homolog D. DHFS-FPGS homolog D. Encodes one of the three folylpolyglutamate synthetase isoforms (FPGSs): FPGS1 (At5g05980, plastidic), FPGS2 (At3g10160, mitochondrial) and FPGS3 (At3g55630, cytosolic)."]
["AT5G24270","SOS3",95.506,1.704,0.23006,7.4069,{"v":1.29e-13,"d":"1.29E-13"},{"v":3.53e-12,"d":"3.53E-12"},"full_name=SALT OVERLY SENSITIVE 3. Calcium-binding EF-hand family protein. encodes a calcium sensor that is essential for K+ nutrition, K+/Na+ selectivity, and salt tolerance. The protein is similar to calcineurin B. Lines carrying recessive mutations are hypersensitive to Na+ and Li+ stresses and is unable to grow in low K+. The growth defect is rescued by extracellular calcium.","AT3G06630",null,135.43,1.6649,0.20914,7.9606,1.71E-15,4.53E-14,"protein kinase family protein.","AT2G34660","ABCC2",1156.3,-0.98831,0.11392,-8.6753,{"v":4.13e-18,"d":"4.13E-18"},1.06E-16,"full_name=ATP-binding cassette C2. multidrug resistance-associated protein 2. encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. An ABCC-type arsenite-phytochelatin transporter. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.","AT3G09950",null,86.764,-6.3633,0.61485,-10.349,4.22E-25,1.04E-23,"hypothetical protein.","AT4G32480",null,73.857,2.4717,0.31047,7.9612,{"v":1.7E-15,"d":"1.70E-15"},{"v":4.12e-14,"d":"4.12E-14"},"sugar phosphate exchanger, putative (DUF506)."]
["AT4G31860",null,664.34,0.90426,0.1221,7.4059,{"v":1.3E-13,"d":"1.30E-13"},3.55E-12,"Protein phosphatase 2C family protein.","AT3G20250","PUM5",1005.3,0.81959,0.10308,7.9509,{"v":1.85e-15,"d":"1.85E-15"},{"v":4.89e-14,"d":"4.89E-14"},"full_name=pumilio 5. pumilio 5. Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.","AT5G09990","PROPEP5",91.761,2.1812,0.25167,8.6669,{"v":4.44e-18,"d":"4.44E-18"},1.14E-16,"full_name=elicitor peptide 5 precursor. elicitor peptide 5 precursor.","AT2G39890","PROT1",93.835,-3.4585,0.33437,-10.343,{"v":4.48e-25,"d":"4.48E-25"},1.11E-23,"full_name=proline transporter 1. proline transporter 1. Encodes a proline transporter with affinity for gly betaine, proline and GABA. Protein is expressed in the vascular tissue, specifically the phloem.","AT3G12520","SULTR4;2",113.13,-1.7868,0.22451,-7.9587,{"v":1.74e-15,"d":"1.74E-15"},{"v":4.19e-14,"d":"4.19E-14"},"full_name=sulfate transporter 4;2. sulfate transporter 4;2. Encodes a sulfate transporter that in induced under sulfate limitation."]
["AT3G07540","FH10",70.536,-2.3256,0.3143,-7.3992,1.37E-13,{"v":3.73e-12,"d":"3.73E-12"},"Actin-binding FH2 (formin homology 2) family protein.","AT5G65550",null,674.82,1.069,0.13451,7.9471,{"v":1.91e-15,"d":"1.91E-15"},{"v":5.03e-14,"d":"5.03E-14"},"UDP-Glycosyltransferase superfamily protein.","AT1G17060","CYP72C1",450.31,-1.5562,0.17965,-8.6623,{"v":4.62e-18,"d":"4.62E-18"},{"v":1.18e-16,"d":"1.18E-16"},"full_name=cytochrome p450 72c1. cytochrome p450 72c1. Encodes a protein with similarity to other cytochrome P450's and is a homolog of BAS1. Over expression causes a dwarf phenotype resembling brassinolide resistant mutants. Double mutant analysis of sob7/bas1 loss of function mutants suggests these genes have redundant functions in light responsiveness. SOB7 may function in metabolizing brassinolides. Expressed in leaf, root, stem and silique but expression highest in flower and cauline leaves. Dominant overexpressing plants have dwarf phenotype, short siliques/seeds, rounded dark green leaves and short hypocotyls in light and dark. Loss of function alleles result in plants with long hypocotyls.","AT3G18750","WNK6",356.38,-1.3478,0.13033,-10.341,{"v":4.58e-25,"d":"4.58E-25"},1.13E-23,"full_name=with no lysine (K) kinase 6. with no lysine (K) kinase 6. Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.","AT4G08390","SAPX",303.07,-1.0964,0.13777,-7.9584,{"v":1.74e-15,"d":"1.74E-15"},{"v":4.2e-14,"d":"4.20E-14"},"full_name=stromal ascorbate peroxidase. stromal ascorbate peroxidase. Encodes a chloroplastic stromal ascorbate peroxidase sAPX. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms."]
["AT2G16660",null,586.09,0.88629,0.11983,7.3962,{"v":1.4e-13,"d":"1.40E-13"},{"v":3.81e-12,"d":"3.81E-12"},"Major facilitator superfamily protein.","AT4G30935","WRKY32",380.77,1.1176,0.14067,7.9452,1.94E-15,{"v":5.1e-14,"d":"5.10E-14"},"full_name=WRKY DNA-binding protein 32. WRKY DNA-binding protein 32. member of WRKY Transcription Factor; Group I","AT1G75390","bZIP44",217.81,-1.9202,0.22169,-8.6617,{"v":4.65e-18,"d":"4.65E-18"},{"v":1.19e-16,"d":"1.19E-16"},"full_name=basic leucine-zipper 44. basic leucine-zipper 44.","AT2G38800",null,769.11,1.095,0.10591,10.339,{"v":4.69e-25,"d":"4.69E-25"},{"v":1.16e-23,"d":"1.16E-23"},"Plant calmodulin-binding protein-like protein.","AT1G09795","ATP-PRT2",850.79,-0.67674,0.085173,-7.9455,{"v":1.93e-15,"d":"1.93E-15"},{"v":4.65e-14,"d":"4.65E-14"},"full_name=ATP phosphoribosyl transferase 2. ATP phosphoribosyl transferase 2. ATP phosphoribosyl transferase, catalyses first step of histidine biosynthesis"]
["AT5G35790","G6PD1",379.04,-1.174,0.15875,-7.3954,{"v":1.41e-13,"d":"1.41E-13"},{"v":3.82e-12,"d":"3.82E-12"},"full_name=glucose-6-phosphate dehydrogenase 1. glucose-6-phosphate dehydrogenase 1. Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root.","AT3G12490","CYSB",3914.6,0.74086,0.093267,7.9435,{"v":1.97e-15,"d":"1.97E-15"},{"v":5.17e-14,"d":"5.17E-14"},"full_name=cystatin B. cystatin B. Encodes a protein with cysteine proteinase inhibitor activity. Overexpression increases tolerance to abiotic stressors (i.e.salt,osmotic, cold stress).","AT1G06430","FTSH8",1423.2,-1.0162,0.11737,-8.6582,{"v":4.79e-18,"d":"4.79E-18"},{"v":1.22e-16,"d":"1.22E-16"},"full_name=FTSH protease 8. FTSH protease 8. encodes a FtsH protease that is localized to the chloroplast","AT1G62480",null,74.383,-5.495,0.53157,-10.337,{"v":4.77e-25,"d":"4.77E-25"},1.18E-23,"Vacuolar calcium-binding protein-like protein.","AT5G65750",null,5868.4,-0.47341,0.059608,-7.9421,1.99E-15,{"v":4.77e-14,"d":"4.77E-14"},"2-oxoglutarate dehydrogenase, E1 component."]
["AT1G80460","NHO1",281.26,-1.1512,0.15568,-7.3946,1.42E-13,{"v":3.84e-12,"d":"3.84E-12"},"full_name=nonhost resistance to P. s. phaseolicola 1. Actin-like ATPase superfamily protein. Encodes a protein similar to glycerol kinase, which converts glycerol to glycerol 3-phosphate and performs a rate-limiting step in glycerol metabolism. This gene is required for both general and specific resistance against bacteria and fungi. Arabidopsis thaliana glycerol kinase (GLR1) mRNA.Involved in flagellin-induced non-host resistance to Pseudomonas. Coronatine partially suppresses flagellin-induced expression of NHO1.","AT4G33130",null,80.04,-2.1259,0.26764,-7.9431,{"v":1.97e-15,"d":"1.97E-15"},{"v":5.18e-14,"d":"5.18E-14"},"rho GTPase-activating protein.","AT3G26570","PHT2;1",98.487,-2.2408,0.25892,-8.6541,{"v":4.97e-18,"d":"4.97E-18"},1.26E-16,"full_name=phosphate transporter 2;1. phosphate transporter 2;1. low affinity phosphate transporter","AT4G33820",null,84.026,-6.5442,0.6331,-10.337,{"v":4.81e-25,"d":"4.81E-25"},1.18E-23,"Glycosyl hydrolase superfamily protein.","AT5G03730","CTR1",969.07,-0.76814,0.096736,-7.9406,{"v":2.01e-15,"d":"2.01E-15"},{"v":4.82e-14,"d":"4.82E-14"},"full_name=CONSTITUTIVE TRIPLE RESPONSE 1. Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed."]
["AT3G01670","SEOa",43.633,6.4919,0.87796,7.3943,1.42E-13,3.85E-12,"full_name=sieve element occlusion a. sieve element occlusion protein. Encodes a protein localized to phloem filaments that is required for phloem filament formation.","AT2G20890","PSB29",1659.2,-0.67767,0.085329,-7.9418,1.99E-15,{"v":5.22e-14,"d":"5.22E-14"},"full_name=photosystem II reaction center PSB29 protein. photosystem II reaction center PSB29 protein. Chloroplast-localized Thylakoid formation1 gene product involved in vesicle-mediated formation of thylakoid membranes. Thf1 antisense lines contain abnormal chloroplasts early in leaf development (chloroplasts have loosely stacked thylakoid membranes). Expression was induced in the light and decreased under dark conditions. G-alpha interaction partner that functions downstream of the plasma membrane%E2%80%93delimited heterotrimeric G-protein (GPA1) in a D-glucose signaling pathway. Localized to both the outer plastid membrane and the stroma. Probably involved in the metabolic pathway that controls the assembly of the PS II complex.","AT1G62640","KAS III",188.03,-1.732,0.20019,-8.6519,5.07E-18,1.29E-16,"full_name=3-ketoacyl-acyl carrier protein synthase III. 3-ketoacyl-acyl carrier protein synthase III. 3-ketoacyl-acyl carrier protein synthase III (KAS III)","AT2G47170","ARF1A1C",169.9,-1.9429,0.18799,-10.335,4.88E-25,{"v":1.2E-23,"d":"1.20E-23"},"Ras-related small GTP-binding family protein. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. Members of this family are known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.","AT5G40670",null,244.27,-1.1991,0.1512,-7.9307,{"v":2.18e-15,"d":"2.18E-15"},{"v":5.22e-14,"d":"5.22E-14"},"PQ-loop repeat family protein / transmembrane family protein."]
["AT3G25920","RPL15",417.55,-0.93628,0.12685,-7.3809,{"v":1.57e-13,"d":"1.57E-13"},{"v":4.25e-12,"d":"4.25E-12"},"full_name=ribosomal protein L15. ribosomal protein L15. encodes a plastid ribosomal protein CL15, a constituent of the large subunit of the ribosomal complex","AT1G17140","ICR1",51.626,-2.7743,0.34938,-7.9406,{"v":2.01e-15,"d":"2.01E-15"},{"v":5.27e-14,"d":"5.27E-14"},"full_name=interactor of constitutive active rops 1. interactor of constitutive active rops 1. Encodes a ROP/RAC effector, designated interactor of constitutive active ROPs 1 (ICR1), that interacts with GTP-bound ROPs. ICR1 is a scaffold mediating formation of protein complexes that are required for cell polarity. ICR1 is comprised of coiled-coil domains and forms complexes with itself and the exocyst vesicle-tethering complex subunit SEC3.","AT2G34710","PHB",190.32,-1.7984,0.20789,-8.6511,{"v":5.1e-18,"d":"5.10E-18"},1.29E-16,"full_name=PHABULOSA. Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein. Dominant PHB mutations cause transformation of abaxial leaf fates into adaxial leaf fates. Encodes a member of HD-Zip family which contains homeodomain-leucine zipper domains and domain similar to a mammalian sterol binding domain. Has overlapping functions with PHAVOLUTA, REVOLUTA and CORONA.","AT3G11780",null,139.62,-2.4735,0.2394,-10.332,{"v":5.04e-25,"d":"5.04E-25"},1.24E-23,"MD-2-related lipid recognition domain-containing protein / ML domain-containing protein.","AT5G53440",null,903.05,0.66835,0.084326,7.9258,{"v":2.27e-15,"d":"2.27E-15"},{"v":5.42e-14,"d":"5.42E-14"},"LOW protein: zinc finger CCCH domain protein."]
["AT1G61097",null,84.107,1.8528,0.2513,7.3729,1.67E-13,{"v":4.5e-12,"d":"4.50E-12"},"Expressed protein.","AT3G06810","IBR3",791.36,0.8247,0.10389,7.9381,{"v":2.05e-15,"d":"2.05E-15"},5.36E-14,"full_name=IBA-RESPONSE 3. acyl-CoA dehydrogenase-like protein. Encodes a protein with similarity to acyl-CoA dehydrogenases. Mutations in IBR3 render plants resistant to indole-3-butryic acid, a putative storage form of the biologically active auxin IAA (indole-3-acetic acid). IBR3 is hypothesized to carry out the second step in a &#946;-oxidation-like process of IBA metabolism in Arabidopsis. Though its subcellular location has not been determined, IBR3 has a peroxisomal targeting sequence and two other putative IBA metabolic enzymes (IBR1 and IBR10) can be found in this organelle. No specific enzymatic activity has been documented for IBR3, but double mutant analyses with CHY1 argue against a role for IBR3 in general fatty acid &#946;-oxidation.","AT5G20230","BCB",49.904,3.0872,0.35686,8.6511,{"v":5.1e-18,"d":"5.10E-18"},1.29E-16,"full_name=blue-copper-binding protein. blue-copper-binding protein. Al-stress-induced gene","AT2G29340",null,155.81,2.2062,0.21357,10.33,{"v":5.16e-25,"d":"5.16E-25"},1.26E-23,"NAD-dependent epimerase/dehydratase family protein.","AT1G77090",null,413.45,-0.94454,0.11918,-7.9255,{"v":2.27e-15,"d":"2.27E-15"},5.43E-14,"thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)."]
["AT4G28190","ULT1",317.02,-1.168,0.1587,-7.3599,1.84E-13,{"v":4.96e-12,"d":"4.96E-12"},"full_name=ULTRAPETALA1. Developmental regulator, ULTRAPETALA. Encodes a novel Cys-rich protein with a B-box like domain that acts as a negative regulator of meristem cell accumulation in inflorescence and floral meristems as loss-of-function ult1 mutations cause inflorescence meristem enlargement, the production of extra flowers and floral organs, and a decrease in floral meristem determinacy. Acts opposite to CLF which represses AG, but preventing deposition of CLF repressive methylation marks.","AT3G04120","GAPC1",1777,-0.80688,0.10172,-7.9324,{"v":2.15e-15,"d":"2.15E-15"},{"v":5.61e-14,"d":"5.61E-14"},"full_name=glyceraldehyde-3-phosphate dehydrogenase C subunit 1. glyceraldehyde-3-phosphate dehydrogenase C subunit 1. encodes cytosolic GADPH (C subunit) involved in the glycolytic pathway but also interacts with H2O2 potentially placing it in a signalling cascade induced by ROS.","AT2G43360","BIO2",70.604,-2.67,0.30881,-8.6461,{"v":5.33e-18,"d":"5.33E-18"},1.35E-16,"full_name=BIOTIN AUXOTROPH 2. Radical SAM superfamily protein. Catalyzes the conversion of dethiobiotin to biotin.","AT4G22780","ACR7",167.05,-2.2961,0.22236,-10.326,{"v":5.38e-25,"d":"5.38E-25"},{"v":1.32e-23,"d":"1.32E-23"},"full_name=ACT domain repeat 7. ACT domain repeat 7. Member of a family of ACT domain containing proteins . ACT domains are involved in amino acid binding .","AT2G32090","GLXI-LIKE;9",1077.2,-0.74524,0.094093,-7.9202,{"v":2.37e-15,"d":"2.37E-15"},{"v":5.65e-14,"d":"5.65E-14"},"Lactoylglutathione lyase / glyoxalase I family protein."]
["AT3G51720",null,56.113,-2.586,0.35152,-7.3566,1.89E-13,5.07E-12,"WEB family protein (DUF827).","AT4G28750","PSAE-1",100.49,-1.7896,0.22565,-7.9308,{"v":2.18e-15,"d":"2.18E-15"},{"v":5.67e-14,"d":"5.67E-14"},"full_name=PSA E1 KNOCKOUT. Photosystem I reaction centre subunit IV / PsaE protein. mutant has Decreased effective quantum yield of photosystem II; Pale green plants; Reduced growth rate; Subunit E of Photosystem I","AT3G61990","OMTF3",57.005,3.1636,0.36601,8.6435,{"v":5.45e-18,"d":"5.45E-18"},1.38E-16,"full_name=O-MTase family 3 protein. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. Encodes a protein methyltransferase. Involved in the methylation of plant transmembrane proteins.","AT2G35860","FLA16",85.145,-6.1584,0.59676,-10.32,{"v":5.75e-25,"d":"5.75E-25"},{"v":1.4e-23,"d":"1.40E-23"},"full_name=FASCICLIN-like arabinogalactan protein 16 precursor. FASCICLIN-like arabinogalactan protein 16 precursor.","AT2G34740",null,3702.4,-0.77724,0.09817,-7.9173,2.43E-15,{"v":5.77e-14,"d":"5.77E-14"},"protein phosphatase 2C family protein."]
["AT1G02816",null,449.95,1.0593,0.14404,7.3541,{"v":1.92e-13,"d":"1.92E-13"},{"v":5.16e-12,"d":"5.16E-12"},"pectinesterase (Protein of unknown function, DUF538).","AT1G68510","LBD42",190.63,-1.4079,0.17779,-7.9192,{"v":2.39e-15,"d":"2.39E-15"},{"v":6.22e-14,"d":"6.22E-14"},"full_name=LOB domain-containing protein 42. LOB domain-containing protein 42.","AT2G22080",null,1415.3,0.8671,0.10033,8.6426,{"v":5.5E-18,"d":"5.50E-18"},{"v":1.39e-16,"d":"1.39E-16"},"transmembrane protein.","AT1G10970","ZIP4",205.18,1.7793,0.17251,10.314,{"v":6.1e-25,"d":"6.10E-25"},1.49E-23,"full_name=zinc transporter 4 precursor. zinc transporter. A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root and shoot. Expression is regulated by copper, but response to copper deficiency is detected only after three weeks of deficiency.","AT1G29150","ATS9",1204.9,-0.65742,0.083092,-7.9119,{"v":2.53e-15,"d":"2.53E-15"},{"v":6.02e-14,"d":"6.02E-14"},"full_name=non-ATPase subunit 9. non-ATPase subunit 9. specifically interacts with FUS6/COP11 via the C-terminal domain of FUS6/COP11 and associates with an ATPase subunit of the 19S proteasome regulatory complex, AtS6A."]
["AT1G07890","APX1",995.67,-0.85127,0.11592,-7.3434,2.08E-13,{"v":5.58e-12,"d":"5.58E-12"},"full_name=ascorbate peroxidase 1. ascorbate peroxidase 1. Encodes a cytosolic ascorbate peroxidase APX1. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.","AT1G18180",null,193.17,-1.5154,0.19139,-7.9177,{"v":2.42e-15,"d":"2.42E-15"},{"v":6.28e-14,"d":"6.28E-14"},"3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295).","AT4G34610","BLH6",130.94,-2.1229,0.24593,-8.6322,{"v":6.02e-18,"d":"6.02E-18"},1.52E-16,"full_name=BEL1-like homeodomain 6. BEL1-like homeodomain 6.","AT3G20230",null,212.07,2.1845,0.21182,10.313,{"v":6.13e-25,"d":"6.13E-25"},1.49E-23,"Ribosomal L18p/L5e family protein.","AT1G61740",null,157.67,1.4654,0.1854,7.904,{"v":2.7e-15,"d":"2.70E-15"},{"v":6.41e-14,"d":"6.41E-14"},"Sulfite exporter TauE/SafE family protein."]
["AT3G16520","UGT88A1",37.607,-3.8907,0.53003,-7.3405,2.13E-13,{"v":5.7e-12,"d":"5.70E-12"},"full_name=UDP-glucosyl transferase 88A1. UDP-glucosyl transferase 88A1.","AT5G59310","LTP4",76.699,-2.213,0.28031,-7.8949,{"v":2.9e-15,"d":"2.90E-15"},{"v":7.53e-14,"d":"7.53E-14"},"full_name=lipid transfer protein 4. lipid transfer protein 4. Encodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The mRNA is present in flowers and siliques, and is strongly up-regulated by abscisic acid. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.","AT1G76620","PDE339",83.96,-2.2911,0.26546,-8.6306,{"v":6.1e-18,"d":"6.10E-18"},{"v":1.54e-16,"d":"1.54E-16"},"Serine/Threonine-kinase, putative (Protein of unknown function, DUF547).","AT4G21120","AAT1",103.61,2.6378,0.2559,10.308,6.49E-25,{"v":1.58e-23,"d":"1.58E-23"},"full_name=amino acid transporter 1. amino acid transporter 1. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system.","AT3G06050","PRXIIF",765.13,-1.3845,0.17518,-7.903,2.72E-15,{"v":6.45e-14,"d":"6.45E-14"},"full_name=peroxiredoxin IIF. peroxiredoxin IIF. Encodes a mitochondrial matrix localized peroxiredoxin involved in redox homeostasis. Knockout mutants have reduced root growth under certain oxidative stress conditions."]
["AT1G17110","UBP15",547.08,1.0185,0.13882,7.337,{"v":2.18e-13,"d":"2.18E-13"},{"v":5.84e-12,"d":"5.84E-12"},"full_name=ubiquitin-specific protease 15. ubiquitin-specific protease 15. Encodes a ubiquitin-specific protease, and its activity has been confirmed in an in vitro assay. ubp15 mutants have defects in cell proliferation, and the associated processes of leaf, root, stem, flower, and silique development. UBP15 can be found in the nucleus and cytoplasm in transient assays. Though UBP15 is expressed in many tissues, UBP15 transcript levels are higher in rosette leaves and inflorescences than in other parts of the plant.","AT2G01340","At17.1",389.47,1.0084,0.12777,7.892,{"v":2.97e-15,"d":"2.97E-15"},{"v":7.7E-14,"d":"7.70E-14"},"plastid movement impaired protein. Encodes a protein whose expression is responsive to nematode infection.","AT3G50240","KICP-02",46.506,-4.3347,0.50264,-8.6239,{"v":6.47e-18,"d":"6.47E-18"},{"v":1.62e-16,"d":"1.62E-16"},"ATP binding microtubule motor family protein. Encodes a kinesin-related protein.","AT1G36370","SHM7",1055.7,-1.5058,0.14608,-10.308,{"v":6.5E-25,"d":"6.50E-25"},{"v":1.58e-23,"d":"1.58E-23"},"full_name=serine hydroxymethyltransferase 7. serine hydroxymethyltransferase 7. Encodes a putative serine hydroxymethyltransferase.","AT1G10070","BCAT-2",443.82,-0.95703,0.12111,-7.9019,{"v":2.75e-15,"d":"2.75E-15"},{"v":6.5e-14,"d":"6.50E-14"},"full_name=branched-chain amino acid transaminase 2. branched-chain amino acid transaminase 2. Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant. Involved in cell wall development."]
["AT3G18780","ACT2",159.11,-1.359,0.18525,-7.3359,{"v":2.2E-13,"d":"2.20E-13"},5.88E-12,"full_name=actin 2. actin 2. Encodes an actin that is constitutively expressed in vegetative structures but not pollen. ACT2 is involved in tip growth of root hairs.","AT5G42240","scpl42",68.441,-2.331,0.29556,-7.8868,{"v":3.1e-15,"d":"3.10E-15"},{"v":8.01e-14,"d":"8.01E-14"},"full_name=serine carboxypeptidase-like 42. serine carboxypeptidase-like 42.","AT1G68510","LBD42",46.833,-4.1986,0.48686,-8.6238,{"v":6.48e-18,"d":"6.48E-18"},{"v":1.62e-16,"d":"1.62E-16"},"full_name=LOB domain-containing protein 42. LOB domain-containing protein 42.","AT4G20020","MORF1",869.46,1.2492,0.1214,10.29,{"v":7.81e-25,"d":"7.81E-25"},1.89E-23,"full_name=multiple organellar RNA editing factor 1. multiple organellar RNA editing factor. Encodes a protein involved in RNA editing in mitochondria.","AT4G31840","ENODL15",70.685,6.9869,0.88581,7.8875,3.08E-15,{"v":7.28e-14,"d":"7.28E-14"},"full_name=early nodulin-like protein 15. early nodulin-like protein 15."]
["AT2G05580",null,81019,0.98904,0.135,7.3261,2.37E-13,{"v":6.32e-12,"d":"6.32E-12"},"Glycine-rich protein family.","AT5G54250","CNGC4",389.3,-1.0196,0.12932,-7.8847,{"v":3.15e-15,"d":"3.15E-15"},{"v":8.14e-14,"d":"8.14E-14"},"full_name=cyclic nucleotide-gated cation channel 4. cyclic nucleotide-gated cation channel 4. member of Cyclic nucleotide gated channel family, downstream component of the signaling pathways leading to HR resistance. mutant plants exhibit gene-for-gene disease resistance against avirulent Pseudomonas syringae despite the near-complete absence of the hypersensitive response (HR). Salicylic acid accumulation in dnd2 mutants is completely PAD4-independent.","AT1G52760","LysoPL2",321.37,-1.2577,0.1459,-8.62,{"v":6.69e-18,"d":"6.69E-18"},{"v":1.68e-16,"d":"1.68E-16"},"full_name=lysophospholipase 2. lysophospholipase 2. Encodes caffeoyl shikimate esterase and is involved in lignin biosynthesis. CSE converts caffeoyl shikimate to caffiate. Loss of function mutations have reduced lignin content and collapsed vessel elements. It is also reported to function as a lysophospholipase 2 (LysoPL2) involved in tolerance to cadmium-induced oxidative stress. Binds Acyl-CoA-binding protein 2 (ACBP2).","AT3G15590",null,700.75,1.1172,0.10859,10.288,{"v":8.02e-25,"d":"8.02E-25"},{"v":1.94e-23,"d":"1.94E-23"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT4G11040","RDO5",1229.4,0.66397,0.084233,7.8826,{"v":3.21e-15,"d":"3.21E-15"},{"v":7.56e-14,"d":"7.56E-14"},"Protein phosphatase 2C family protein. Encodes a nuclear localized protein with sequence similarity to PP2C phosphatases that is involved in seed dormancy. Loss of function mutations have reduced seed dormancy but does not act through ABA or DOG1 pathways."]
["AT4G32490","ENODL4",32.772,-4.933,0.67388,-7.3203,{"v":2.47e-13,"d":"2.47E-13"},{"v":6.58e-12,"d":"6.58E-12"},"full_name=early nodulin-like protein 4. early nodulin-like protein 4.","AT4G38430","ROPGEF1",196.83,-1.2805,0.16253,-7.8785,{"v":3.31e-15,"d":"3.31E-15"},{"v":8.54e-14,"d":"8.54E-14"},"full_name=ROP (rho of plants) guanine nucleotide exchange factor 1. rho guanyl-nucleotide exchange factor 1. Member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily, also known as DUF315). Interacts with ROP1 but the whole protein lacks Rho guanyl-nucleotide exchange factor activity in vitro. The DUF315/PRONE domain is sufficient to confer RopGEF catalytic activity.","AT2G45900","TRM13",45.783,-4.0478,0.47016,-8.6094,{"v":7.34e-18,"d":"7.34E-18"},{"v":1.84e-16,"d":"1.84E-16"},"full_name=TON1 Recruiting Motif 13. Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein.","AT3G10010","DML2",65.819,-5.4361,0.52882,-10.28,{"v":8.71e-25,"d":"8.71E-25"},{"v":2.1e-23,"d":"2.10E-23"},"full_name=demeter-like 2. demeter-like 2. Encodes a protein with DNA glycosylase activity that is involved in maintaining methylation marks.","AT4G13510","AMT1;1",439.52,1.1624,0.14746,7.8825,{"v":3.21e-15,"d":"3.21E-15"},{"v":7.56e-14,"d":"7.56E-14"},"full_name=ammonium transporter 1;1. ammonium transporter 1;1. Encodes a plasma membrane localized ammonium transporter. Contains a cytosolic trans-activation domain essential for ammonium uptake."]
["AT1G66960","LUP5",45.947,-8.9091,1.218,-7.3143,{"v":2.59e-13,"d":"2.59E-13"},{"v":6.88e-12,"d":"6.88E-12"},"Terpenoid cyclases family protein.","AT2G14060",null,139.06,1.5775,0.20024,7.8782,{"v":3.32e-15,"d":"3.32E-15"},{"v":8.55e-14,"d":"8.55E-14"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. encodes a protein whose sequence is similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (GI:6002712)(Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (BAMT)(GI:9789277)(Antirrhinum majus)","AT3G48270","CYP71A26",2086.2,1.2083,0.14055,8.5967,{"v":8.21e-18,"d":"8.21E-18"},2.05E-16,"full_name=cytochrome P450, family 71, subfamily A, polypeptide 26. cytochrome P450, family 71, subfamily A, polypeptide 26. putative cytochrome P450","AT2G23510","SDT",64.54,-5.4262,0.52789,-10.279,{"v":8.77e-25,"d":"8.77E-25"},{"v":2.11e-23,"d":"2.11E-23"},"full_name=spermidine disinapoyl acyltransferase. spermidine disinapoyl acyltransferase.","AT3G02040","SRG3",318.27,1.3042,0.16546,7.8822,{"v":3.22e-15,"d":"3.22E-15"},{"v":7.56e-14,"d":"7.56E-14"},"full_name=senescence-related gene 3. senescence-related gene 3. Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family. Has glycerophosphodiester phosphodiesterase activity. Functions in maintaining cellular phosphate homeostasis under phosphate starvation."]
["AT5G65210","TGA1",92.19,2.1541,0.29455,7.3133,2.61E-13,{"v":6.92e-12,"d":"6.92E-12"},"full_name=TGACG sequence-specific binding protein 1. bZIP transcription factor family protein. Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.","AT2G47940","DEG2",114.53,-1.6897,0.21473,-7.869,{"v":3.58e-15,"d":"3.58E-15"},{"v":9.19e-14,"d":"9.19E-14"},"full_name=degradation of periplasmic proteins 2. DEGP protease 2. Encodes DegP2 protease (DEGP2); nuclear gene for chloroplast product.","AT3G03490","PEX19-1",644.45,1.2752,0.14842,8.5918,{"v":8.56e-18,"d":"8.56E-18"},{"v":2.13e-16,"d":"2.13E-16"},"full_name=peroxin 19-1. peroxin 19-1. Encodes one of two PEX19 peroxin isoforms. It is predominantly cytosolic and forms dimers.","AT5G04810","PPR4",429.9,1.2462,0.12134,10.27,{"v":9.6e-25,"d":"9.60E-25"},{"v":2.31e-23,"d":"2.31E-23"},"pentatricopeptide (PPR) repeat-containing protein.","AT3G44330",null,240.6,1.1474,0.14568,7.8765,{"v":3.37e-15,"d":"3.37E-15"},{"v":7.91e-14,"d":"7.91E-14"},"M28 Zn-peptidase nicastrin."]
["AT3G53040",null,157.02,1.6625,0.22776,7.2992,{"v":2.9e-13,"d":"2.90E-13"},{"v":7.67e-12,"d":"7.67E-12"},"late embryogenesis abundant protein, putative / LEA protein.","AT2G01910","ATMAP65-6",428.95,-1.0456,0.13299,-7.8627,{"v":3.76e-15,"d":"3.76E-15"},{"v":9.65e-14,"d":"9.65E-14"},"Microtubule associated protein (MAP65/ASE1) family protein. Binds microtubules. Induces a crisscross mesh of microtubules, not bundles. Not involved in microtubule polymerization nor nucleation. Localizes to mitochondria.","AT3G48670","IDN2",377.85,-1.1429,0.13315,-8.5834,{"v":9.21e-18,"d":"9.21E-18"},{"v":2.29e-16,"d":"2.29E-16"},"full_name=INVOLVED IN DE NOVO 2. XH/XS domain-containing protein. Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.","AT4G37530",null,61.87,-4.9542,0.48241,-10.27,{"v":9.65e-25,"d":"9.65E-25"},{"v":2.32e-23,"d":"2.32E-23"},"Peroxidase superfamily protein.","AT4G01026","PYL7",288.07,1.1692,0.14867,7.8645,{"v":3.7e-15,"d":"3.70E-15"},{"v":8.69e-14,"d":"8.69E-14"},"full_name=PYR1-like 7. PYR1-like 7. Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2. PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of ABI1 and ABI2."]
["AT2G23550","MES6",44.827,-2.6296,0.36066,-7.291,3.08E-13,{"v":8.14e-12,"d":"8.14E-12"},"full_name=methyl esterase 6. methyl esterase 6. Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco but no enzymatic activity has been identified for this protein.","AT2G26500",null,54.1,-2.9696,0.37834,-7.849,{"v":4.19e-15,"d":"4.19E-15"},1.07E-13,"cytochrome b6f complex subunit (petM).","AT1G48300","DGAT3",1084.4,-0.87863,0.10246,-8.5756,{"v":9.85e-18,"d":"9.85E-18"},{"v":2.45e-16,"d":"2.45E-16"},"full_name=diacylglycerol acyltransferase 3. diacylglycerol acyltransferase.","AT5G55750",null,2990.5,-0.90631,0.088257,-10.269,9.72E-25,{"v":2.33e-23,"d":"2.33E-23"},"hydroxyproline-rich glycoprotein family protein.","AT5G28060","RPS24B",585.69,0.8264,0.10516,7.8585,{"v":3.89e-15,"d":"3.89E-15"},{"v":9.1e-14,"d":"9.10E-14"},"Ribosomal protein S24e family protein."]
["AT3G13750","BGAL1",296.04,-1.1998,0.16462,-7.2883,{"v":3.14e-13,"d":"3.14E-13"},{"v":8.29e-12,"d":"8.29E-12"},"full_name=beta galactosidase 1. beta galactosidase 1. beta-galactosidase, glycosyl hydrolase family 35","AT5G45680","FKBP13",105.46,-1.8139,0.23119,-7.846,{"v":4.29e-15,"d":"4.29E-15"},{"v":1.1E-13,"d":"1.10E-13"},"full_name=FK506-binding protein 13. FK506-binding protein 13. Peptidyl-Prolyl Isomerase located in chloroplast thylakoid lumen","AT5G23190","CYP86B1",491.44,-1.3202,0.15401,-8.572,1.02E-17,2.52E-16,"full_name=cytochrome P450, family 86, subfamily B, polypeptide 1. cytochrome P450, family 86, subfamily B, polypeptide 1. cytochrome P450 CYP86B1, nuclear gene for chloroplast product. CYP86B1 is a very long chain fatty acid hydroxylase specifically involved in polyester monomer biosynthesis during the course of plant development.","AT3G57780",null,64.859,-4.9253,0.47966,-10.268,{"v":9.8e-25,"d":"9.80E-25"},2.35E-23,"nucleolar-like protein.","AT2G23640","RTNLB13",4186.8,-0.53503,0.068098,-7.8567,{"v":3.94e-15,"d":"3.94E-15"},{"v":9.22e-14,"d":"9.22E-14"},"full_name=Reticulan like protein B13. Reticulan like protein B13. Encodes RTNLB13, a reticulon protein integral to the endoplasmic reticulum (ER) membrane that have the ability to shape the ER into tubules."]
["AT3G21550","DMP2",136.35,1.5449,0.21198,7.2876,{"v":3.15e-13,"d":"3.15E-13"},{"v":8.32e-12,"d":"8.32E-12"},"full_name=DUF679 domain membrane protein 2. transmembrane protein, putative (DUF679 domain membrane protein 2).","AT1G43650","UMAMIT22",428.63,1.2675,0.16157,7.845,{"v":4.33e-15,"d":"4.33E-15"},{"v":1.11e-13,"d":"1.11E-13"},"full_name=Usually multiple acids move in and out Transporters 22. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT5G62700","TUB3",238.99,-1.6815,0.19635,-8.5641,{"v":1.09e-17,"d":"1.09E-17"},{"v":2.7E-16,"d":"2.70E-16"},"full_name=tubulin beta chain 3. tubulin beta chain 3. encodes tubulin beta-2/beta-3 chain","AT1G48320","DHNAT1",69.976,-3.7654,0.36686,-10.264,{"v":1.02e-24,"d":"1.02E-24"},{"v":2.45e-23,"d":"2.45E-23"},"full_name=DHNA-CoA thioesterase 1. Thioesterase superfamily protein. Encodes one of the two functional DHNA-CoA (1,4-dihydroxy-2-naphthoyl-CoA) thioesterases found in Arabidopsis.","AT1G52510",null,231.61,-1.1585,0.1475,-7.8541,{"v":4.03e-15,"d":"4.03E-15"},{"v":9.4e-14,"d":"9.40E-14"},"alpha/beta-Hydrolases superfamily protein."]
["AT2G47240","LACS1",1735.2,-0.79954,0.10975,-7.285,{"v":3.22e-13,"d":"3.22E-13"},{"v":8.47e-12,"d":"8.47E-12"},"full_name=LONG-CHAIN ACYL-COA SYNTHASE 1. AMP-dependent synthetase and ligase family protein. Encodes an acyl-CoA synthetase that acts on long-chain and very-long-chain fatty acids, involved in cuticular wax and cutin biosynthesis","AT5G55370","AT2",79.422,-2.0443,0.26061,-7.8442,{"v":4.36e-15,"d":"4.36E-15"},{"v":1.11e-13,"d":"1.11E-13"},"MBOAT (membrane bound O-acyl transferase) family protein.","AT3G55620","eIF6A",862.68,0.95798,0.1119,8.561,1.12E-17,{"v":2.77e-16,"d":"2.77E-16"},"full_name=eukaryotic initiation facor 6A. Translation initiation factor IF6.","AT5G08570",null,740.25,-1.0637,0.10364,-10.263,1.03E-24,2.47E-23,"Pyruvate kinase family protein.","AT1G55820",null,269.36,1.1007,0.1403,7.8452,4.32E-15,1.01E-13,"lysine-specific demethylase, putative (DUF1296)."]
["AT4G01970","STS",2121.2,0.71442,0.098182,7.2764,3.43E-13,{"v":9.02e-12,"d":"9.02E-12"},"full_name=stachyose synthase. stachyose synthase. Encodes a putative stachyose synthetase or raffinose synthase.","AT1G09420","G6PD4",736.17,-0.79464,0.10133,-7.8421,{"v":4.43e-15,"d":"4.43E-15"},1.13E-13,"full_name=glucose-6-phosphate dehydrogenase 4. glucose-6-phosphate dehydrogenase 4. Encodes a protein similar to glucose-6-phosphate dehydrogenase but, based on amino acid differences in the active site and lack of activity, does not encode a functional G6PDH. The amino acid sequence for the consensus sequence of the G6PDH active site (DHYLGKE) differs in three places in this protein. gc exon splice site at 20574 is based on protein alignment, and is not confirmed experimentally.","AT4G10840","KLCR1",255.49,-1.43,0.16726,-8.5497,{"v":1.23e-17,"d":"1.23E-17"},{"v":3.05e-16,"d":"3.05E-16"},"full_name=kinesin light chain-related 1. Tetratricopeptide repeat (TPR)-like superfamily protein.","AT4G20260","PCAP1",120.2,-2.5737,0.25115,-10.247,1.22E-24,{"v":2.9e-23,"d":"2.90E-23"},"full_name=plasma-membrane associated cation-binding protein 1. plasma-membrane associated cation-binding protein 1. Encodes a Ca2+ and Cu2+ binding protein. N-terminal myristylation on glycine 2 appears to enable it to associate tightly with the plasma membrane. Recombinant PCaP1 interacts strongly with phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2) and PtdIns (3,4,5)P3, and weakly with PtdIns(3,5)P2 and PtdIns(4,5). It also interacts with calmodulin (CaM) in a calcium-dependent manner. CaM does not interfere with PCaP1 membrane localization but does weaken interactions between it and the PtdInsPs. PCaP1 has an apparent Kd of 10 uM for Cu2+ and can bind six ions per protein. Transcript levels for PCaP1 first fall and then rise following exposure to CuCl2. Mannitol, sorbitol, and the flg22 oligopeptide also increase expression levels.","AT3G25220","FKBP15-1",238.69,-1.1483,0.14642,-7.8424,4.42E-15,1.03E-13,"full_name=FK506-binding protein 15 kD-1. FK506-binding protein 15 kD-1. immunophilin (FKBP15-1)"]
["AT3G18400","NAC058",122.16,-1.872,0.25746,-7.2708,{"v":3.57e-13,"d":"3.57E-13"},{"v":9.39e-12,"d":"9.39E-12"},"full_name=NAC domain containing protein 58. NAC domain containing protein 58.","AT5G54390","HL",746.65,0.92018,0.11756,7.8272,{"v":4.99e-15,"d":"4.99E-15"},{"v":1.27e-13,"d":"1.27E-13"},"full_name=HAL2-like. HAL2-like protein. Encodes a 3'-phosphoadenosine-5'-phosphate (PAP) phosphatase that is sensitive to physiological concentrations of Na+. It does not also act as inositol polyphosphate 1-phosphatases, which other members of the HAL2-like family do. It is proposed that AHL acts in concert with sulphotransferases to prevent both the toxicity of PAP on RNA processing enzymes as well as the product inhibition of PAP on sulphate conjugation.","AT4G28510","PHB1",447.72,1.1772,0.13771,8.5485,1.25E-17,{"v":3.08e-16,"d":"3.08E-16"},"full_name=prohibitin 1. prohibitin 1. prohibitin 1 (Atphb1)","AT5G48500",null,69.567,-4.2775,0.41762,-10.243,1.28E-24,{"v":3.05e-23,"d":"3.05E-23"},"pathogenic type III effector avirulence factor Avr AvrRpt-cleavage: cleavage site protein.","AT3G15000","RIP1",2397.3,-0.52359,0.066802,-7.8379,{"v":4.58e-15,"d":"4.58E-15"},1.06E-13,"full_name=RNA-editing factor interacting protein 1. cobalt ion binding protein. Encodes RIP1 (RNA-editing factor interacting protein 1). Involved in chloroplast and mitochondrial RNA editing."]
["AT1G44446","CH1",428.52,-1.0559,0.14543,-7.2608,{"v":3.85e-13,"d":"3.85E-13"},{"v":1.01e-11,"d":"1.01E-11"},"full_name=CHLORINA 1. Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein. Encodes chlorophyllide <i>a</i> oxygenase which converts chlorophyllide <i>a</i> to chlorophyllide <i>b</i> by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide <i>a</i> . Mutants are deficient in pigments that associate with thylakoid membrane proteins, lacking chlorophyll <i>b</i> and light-harvesting proteins of photosystem II. The protein was shown through cross-linking experiments to interact with Toc75, Toc34, Tic40, Tic20 and Tic22.","AT5G51810","GA20OX2",419.82,-1.5649,0.19994,-7.8271,{"v":4.99e-15,"d":"4.99E-15"},{"v":1.27e-13,"d":"1.27E-13"},"full_name=gibberellin 20 oxidase 2. gibberellin 20 oxidase 2. Encodes gibberellin 20-oxidase. Involved in gibberellin biosynthesis. Up-regulated by far red light in elongating petioles. Not regulated by a circadian clock.","AT5G63190","MRF1",1399.5,1.0825,0.12669,8.545,1.28E-17,{"v":3.16e-16,"d":"3.16E-16"},"MA3 domain-containing protein.","AT5G15800","2024-09-01",79.75,-6.2592,0.61123,-10.24,1.31E-24,3.12E-23,"full_name=SEPALLATA1. K-box region and MADS-box transcription factor family protein. Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3.","AT2G04520",null,1546.8,-0.63274,0.08081,-7.8301,{"v":4.88e-15,"d":"4.88E-15"},1.13E-13,"Nucleic acid-binding, OB-fold-like protein."]
["AT2G05632",null,173.68,1.2738,0.17546,7.2599,{"v":3.87e-13,"d":"3.87E-13"},{"v":1.01e-11,"d":"1.01E-11"},"hypothetical protein.","AT3G07770","Hsp89.1",331.39,1.1514,0.14712,7.8261,{"v":5.03e-15,"d":"5.03E-15"},{"v":1.28e-13,"d":"1.28E-13"},"full_name=HEAT SHOCK PROTEIN 89.1. HEAT SHOCK PROTEIN 89.1.","AT4G31860",null,1601.9,0.81928,0.095888,8.5441,{"v":1.3E-17,"d":"1.30E-17"},{"v":3.19e-16,"d":"3.19E-16"},"Protein phosphatase 2C family protein.","AT5G24120","SIGE",132.43,-2.7978,0.27324,-10.239,{"v":1.32e-24,"d":"1.32E-24"},{"v":3.14e-23,"d":"3.14E-23"},"full_name=sigma factor E. sigma factor E. Encodes a specialized sigma factor that functions in regulation of plastid genes and is responsible for the light-dependent transcription at the psbD LRP. Activation of SIG5 is dependent upon blue light and mediated by cryptochromes.","AT1G78580","TPS1",966.14,-0.64115,0.081902,-7.8283,{"v":4.95e-15,"d":"4.95E-15"},{"v":1.15e-13,"d":"1.15E-13"},"full_name=trehalose-6-phosphate synthase. trehalose-6-phosphate synthase. Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division."]
["AT5G03760","ATCSLA09",474.82,-1.3678,0.18841,-7.2595,{"v":3.88e-13,"d":"3.88E-13"},{"v":1.02e-11,"d":"1.02E-11"},"Nucleotide-diphospho-sugar transferases superfamily protein. encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.","AT3G10020",null,352.04,1.3793,0.17628,7.8242,{"v":5.11e-15,"d":"5.11E-15"},{"v":1.29e-13,"d":"1.29E-13"},"plant/protein.","AT5G50240","PIMT2",1179.8,0.8781,0.10278,8.5432,1.31E-17,{"v":3.21e-16,"d":"3.21E-16"},"full_name=protein-l-isoaspartate methyltransferase 2. protein-l-isoaspartate methyltransferase 2. L-isoaspartyl methyltransferase 2 (PIMT2)gene, alternatively spliced.","AT5G66080","APD9",369.89,-1.6057,0.15696,-10.23,{"v":1.46e-24,"d":"1.46E-24"},{"v":3.46e-23,"d":"3.46E-23"},"Protein phosphatase 2C family protein.","AT5G17310","UGP2",1469,-0.70152,0.089733,-7.8179,{"v":5.37e-15,"d":"5.37E-15"},1.24E-13,"full_name=UDP-glucose pyrophosphorylase 2. UDP-glucose pyrophosphorylase 2."]
["AT4G29800","PLP8",96.391,-1.6413,0.2263,-7.2528,{"v":4.08e-13,"d":"4.08E-13"},{"v":1.07e-11,"d":"1.07E-11"},"full_name=PATATIN-like protein 8. PATATIN-like protein 8.","AT3G27870","ALA8",447.83,0.99153,0.12674,7.8235,{"v":5.14e-15,"d":"5.14E-15"},{"v":1.3E-13,"d":"1.30E-13"},"ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein.","AT5G66780",null,5687.6,1.0277,0.12037,8.5381,1.36E-17,{"v":3.35e-16,"d":"3.35E-16"},"late embryogenesis abundant protein.","AT4G30720","PDE327",180.96,1.762,0.17227,10.228,1.48E-24,3.51E-23,"full_name=PIGMENT DEFECTIVE 327. FAD/NAD(P)-binding oxidoreductase family protein. Encodes a putative oxidoreductase/electron carrier detected in the chloroplast stroma that is essential to ensure a correct electron flow through the photosynthetic chain and, hence, photosynthesis efficiency and normal growth. Mutations in the Col-0 allele result in pale green pigmentation and defective growth.","AT5G47120","BI1",822.11,-0.75368,0.096486,-7.8113,{"v":5.66e-15,"d":"5.66E-15"},1.31E-13,"full_name=BAX inhibitor 1. BAX inhibitor 1. Encodes BI-1, a homolog of mammalian Bax inhibitor 1. Functions as an attenuator of biotic and abiotic types of cell death. Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta."]
["AT5G62700","TUB3",1553.6,-0.80061,0.1104,-7.2518,{"v":4.11e-13,"d":"4.11E-13"},{"v":1.07e-11,"d":"1.07E-11"},"full_name=tubulin beta chain 3. tubulin beta chain 3. encodes tubulin beta-2/beta-3 chain","AT1G10310",null,309.75,1.0816,0.13826,7.8229,{"v":5.16e-15,"d":"5.16E-15"},{"v":1.3E-13,"d":"1.30E-13"},"NAD(P)-binding Rossmann-fold superfamily protein. encodes a NADPH-dependent pterin aldehyde reductase that accepts pterin aldehyde as well as dihydropterin aldehyde as substrates involved in metabolism and salvage of folate and its derivatives.","AT2G32530","CSLB03",93.672,-2.7603,0.3235,-8.5325,{"v":1.43e-17,"d":"1.43E-17"},{"v":3.51e-16,"d":"3.51E-16"},"full_name=cellulose synthase-like B3. cellulose synthase-like B3. encodes a gene similar to cellulose synthase","AT3G20140","CYP705A23",95.375,-2.7814,0.27196,-10.227,{"v":1.5E-24,"d":"1.50E-24"},{"v":3.55e-23,"d":"3.55E-23"},"full_name=cytochrome P450, family 705, subfamily A, polypeptide 23. cytochrome P450, family 705, subfamily A, polypeptide 23. member of CYP705A","AT3G28210","PMZ",79.043,2.3726,0.30378,7.8104,{"v":5.7e-15,"d":"5.70E-15"},{"v":1.32e-13,"d":"1.32E-13"},"zinc finger (AN1-like) family protein. Encodes a putative zinc finger protein (PMZ)."]
["AT1G16730","UP6",136.34,1.5201,0.2098,7.2455,{"v":4.31e-13,"d":"4.31E-13"},{"v":1.12e-11,"d":"1.12E-11"},"full_name=unknown protein 6. hypothetical protein.","AT1G55500","ECT4",221.62,1.275,0.16304,7.8204,5.27E-15,{"v":1.33e-13,"d":"1.33E-13"},"full_name=evolutionarily conserved C-terminal region 4. evolutionarily conserved C-terminal region 4.","AT3G08590","iPGAM2",266.75,-1.4762,0.17305,-8.5306,{"v":1.46e-17,"d":"1.46E-17"},{"v":3.56e-16,"d":"3.56E-16"},"full_name=2,3-biphosphoglycerate-independent phosphoglycerate mutase 2. Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent. Encodes a 2,3-biphosphoglycerate-independent phosphoglycerate mutase that is involved in pollen development and stomatal movement.","AT1G51500","ABCG12",83.331,-2.7712,0.27103,-10.225,1.54E-24,{"v":3.63e-23,"d":"3.63E-23"},"full_name=ATP-binding cassette G12. ABC-2 type transporter family protein. Encodes an ABC transporter involved in cuticular wax biosynthesis. Lines carrying recessive mutations in this locus have weakly glaucous stem surface, and relative elevated secondary alcohols and ketones.","AT5G65620","OOP",665.23,-0.76772,0.098337,-7.8071,5.85E-15,{"v":1.35e-13,"d":"1.35E-13"},"Zincin-like metalloproteases family protein."]
["AT2G41290","SSL2",1185.3,-0.86339,0.11925,-7.2403,{"v":4.48e-13,"d":"4.48E-13"},{"v":1.16e-11,"d":"1.16E-11"},"full_name=strictosidine synthase-like 2. strictosidine synthase-like 2. Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.","AT1G19715",null,91.63,-1.9439,0.24866,-7.8177,{"v":5.38e-15,"d":"5.38E-15"},{"v":1.35e-13,"d":"1.35E-13"},"Mannose-binding lectin superfamily protein.","AT3G23090","WDL3",1295.9,-0.97826,0.11474,-8.5259,{"v":1.52e-17,"d":"1.52E-17"},{"v":3.7E-16,"d":"3.70E-16"},"TPX2 (targeting protein for Xklp2) protein family.","AT3G02040","SRG3",338.36,-1.8606,0.18201,-10.223,1.57E-24,{"v":3.71e-23,"d":"3.71E-23"},"full_name=senescence-related gene 3. senescence-related gene 3. Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family. Has glycerophosphodiester phosphodiesterase activity. Functions in maintaining cellular phosphate homeostasis under phosphate starvation.","AT3G54720","AMP1",424.9,0.97656,0.12509,7.8066,{"v":5.88e-15,"d":"5.88E-15"},{"v":1.35e-13,"d":"1.35E-13"},"full_name=ALTERED MERISTEM PROGRAM 1. Peptidase M28 family protein. Encodes glutamate carboxypeptidase. Various alleles show-increased cotyledon number and rate of leaf initiation, show transformation of leaves to cotyledons, altered flowering time and photomorphogenesis and an increased level of cytokinin biosynthesis. Involved in ethylene enhanced hypocotyl elongation in the light. Strong genetic interaction between TGH and AMP1."]
["AT5G07880","SNAP29",38.807,-3.0073,0.41551,-7.2376,{"v":4.57e-13,"d":"4.57E-13"},{"v":1.19e-11,"d":"1.19E-11"},"full_name=synaptosomal-associated protein SNAP25-like 29. synaptosomal-associated protein SNAP25-like 29. member of mammalian SNAP25 Gene Family, a type of SNARE proteins with two chains. There are three members in Arabidopsis: SNAP30, SNAP29, and SNAP33.","AT4G12420","SKU5",132.71,-1.5691,0.20081,-7.8141,{"v":5.54e-15,"d":"5.54E-15"},{"v":1.39e-13,"d":"1.39E-13"},"Cupredoxin superfamily protein. Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues.","AT4G21380","RK3",47.249,-3.9838,0.46729,-8.5254,{"v":1.52e-17,"d":"1.52E-17"},{"v":3.71e-16,"d":"3.71E-16"},"full_name=receptor kinase 3. receptor kinase 3. encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels.","AT5G41080","GDPD2",119.7,-3.7925,0.371,-10.222,{"v":1.58e-24,"d":"1.58E-24"},{"v":3.71e-23,"d":"3.71E-23"},"full_name=glycerophosphodiester phosphodiesterase 2. PLC-like phosphodiesterases superfamily protein. Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family.","AT2G24490","RPA2",63.795,2.508,0.3218,7.7937,{"v":6.51e-15,"d":"6.51E-15"},1.49E-13,"full_name=replicon protein A2. replicon protein A2. Encodes a component of Replication Protein A. Component of transcriptional gene silencing which does not affect endogenous small RNA accumulation nor DNA methylation. Localized in the nucleus. Involved in DNA repair. Interacts physically with ROS1."]
["AT4G00370","ANTR2",308.45,-1.0909,0.15075,-7.2365,{"v":4.6e-13,"d":"4.60E-13"},{"v":1.19e-11,"d":"1.19E-11"},"Major facilitator superfamily protein. Encodes an inorganic phosphate transporter (PHT4;4) that can transport ascorbate and is located in the chloroplast envelope membrane. It has been shown to play a role in the xanthophyll cycle during photosynthesis and may be required for tolerance to strong light stress.","AT2G42320",null,113.86,-1.6506,0.21138,-7.8087,5.78E-15,{"v":1.45e-13,"d":"1.45E-13"},"nucleolar protein gar2-like protein.","AT1G28360","ERF12",176.75,1.5254,0.17929,8.5078,1.77E-17,4.31E-16,"full_name=ERF domain protein 12. ERF domain protein 12. encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ERF12). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.","AT3G54510",null,819.86,-1.0886,0.10654,-10.217,{"v":1.66e-24,"d":"1.66E-24"},{"v":3.9E-23,"d":"3.90E-23"},"Early-responsive to dehydration stress protein (ERD4).","AT1G48405",null,39.433,3.8134,0.48968,7.7877,{"v":6.83e-15,"d":"6.83E-15"},{"v":1.57e-13,"d":"1.57E-13"},"Kinase interacting (KIP1-like) family protein."]
["AT2G42790","CSY3",986.38,0.77451,0.10717,7.2272,{"v":4.93e-13,"d":"4.93E-13"},1.28E-11,"full_name=citrate synthase 3. citrate synthase 3. Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development.","AT4G24715",null,151.13,1.4936,0.19134,7.806,{"v":5.9e-15,"d":"5.90E-15"},1.48E-13,"high-affinity nitrate transporter-like protein.","AT5G03210","DIP2",482.51,1.7078,0.20109,8.4926,2.02E-17,{"v":4.91e-16,"d":"4.91E-16"},"full_name=DBP-interacting protein 2. E3 ubiquitin-protein ligase. Encodes a small polypeptide contributing to resistance to potyvirus.","AT1G09770","CDC5",1292.3,0.91943,0.090005,10.215,1.69E-24,{"v":3.98e-23,"d":"3.98E-23"},"full_name=cell division cycle 5. cell division cycle 5. Member of MYB3R- and R2R3- type MYB- encoding genes. Essential for plant innate immunity. Interacts with MOS4 and PRL1.","AT3G18980","ETP1",409.07,0.93172,0.11973,7.7818,{"v":7.15e-15,"d":"7.15E-15"},{"v":1.64e-13,"d":"1.64E-13"},"full_name=EIN2 targeting protein1. EIN2 targeting protein1."]
["AT2G37070","GPT1",32.991,-3.3547,0.46422,-7.2266,{"v":4.95e-13,"d":"4.95E-13"},1.28E-11,"TRIO/F-actin-binding protein.","AT4G19810","ChiC",140.31,1.5514,0.19886,7.8014,6.12E-15,1.53E-13,"full_name=class V chitinase. Glycosyl hydrolase family protein with chitinase insertion domain-containing protein. ChiC encodes a Class V chitinase that is a part of glycoside hydrolase family 18 based on CAZy groupings. It appears to primarily act as an exochitinase in vitro where it predominantly cleaves a chitobiose (GlcNAc)2 residue from the non-reducing end of a chitin oligosaccharide. However, it shows some minor endochitinase activity in vitro, as well. A putative 24 amino-acid signal peptide may direct this protein to the secretory system and it has been detected in cell wall apoplastic fluid. RT-PCR experiments demonstrate that ChiC transcript levels are increased in response to abscisisc acid, jasmonic acid, and NaCl stress. Microarray results also suggest that transcript levels rise in response to osmotic stress, two fungal pathogens, a bacterial pathogen, and the elicitor flagellin.","AT1G02500","SAM1",1085.2,-1.0644,0.12546,-8.4834,{"v":2.19e-17,"d":"2.19E-17"},{"v":5.31e-16,"d":"5.31E-16"},"full_name=S-adenosylmethionine synthetase 1. S-adenosylmethionine synthetase 1. encodes a S-adenosylmethionine synthetase. SAM1 is regulated by protein S-nitrosylation. The covalent binding of nitric oxide (NO) to the Cys114 residue inhibits the enzyme activity.","AT1G30700","ATBBE8",161.18,-3.0286,0.29682,-10.203,{"v":1.91e-24,"d":"1.91E-24"},{"v":4.49e-23,"d":"4.49E-23"},"FAD-binding Berberine family protein.","AT1G22610","MCTP6",966.55,0.78806,0.10144,7.7689,{"v":7.92e-15,"d":"7.92E-15"},{"v":1.81e-13,"d":"1.81E-13"},"C2 calcium/lipid-binding plant phosphoribosyltransferase family protein."]
["AT3G27690","LHCB2.3",34.671,-5.2869,0.73218,-7.2208,{"v":5.17e-13,"d":"5.17E-13"},1.33E-11,"full_name=photosystem II light harvesting complex gene 2.3. photosystem II light harvesting complex protein 2.3. Encodes Lhcb2.4. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus.","AT2G29890","VLN1",36.675,-4.3162,0.55332,-7.8005,{"v":6.17e-15,"d":"6.17E-15"},1.54E-13,"full_name=villin 1. villin-like 1. Encodes a ubiquitously expressed villin-like protein, whose mRNA may be alternatively processed. Villin belongs to a superfamily of actin binding proteins called the villin/gelsolin family. Animal villins are involved in actin binding. VLN1 protein co-localizes with actin filaments in several assays. VLN1 binds and bundles F-actin in a calcium-independent manner. It does not nucleate, cap or sever actin filaments and it stabilizes actin filaments, protecting them from ADF-mediated depolymerization.","AT3G19210","RAD54",78.289,2.4702,0.29131,8.4795,2.26E-17,{"v":5.48e-16,"d":"5.48E-16"},"full_name=homolog of RAD54. DNA repair/recombination protein. Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases. Functions in DNA repair via homologous recombination.","AT3G48740","SWEET11",265.39,-7.2936,0.71485,-10.203,{"v":1.92e-24,"d":"1.92E-24"},{"v":4.5e-23,"d":"4.50E-23"},"Nodulin MtN3 family protein. Encodes a member of the SWEET sucrose efflux transporter family proteins.","AT1G01240",null,1705.7,-0.80001,0.10298,-7.7688,{"v":7.93e-15,"d":"7.93E-15"},{"v":1.81e-13,"d":"1.81E-13"},"transmembrane protein."]
["AT4G35480","RHA3B",172.42,-1.3706,0.18983,-7.2206,{"v":5.18e-13,"d":"5.18E-13"},1.33E-11,"full_name=RING-H2 finger A3B. RING-H2 finger A3B. Encodes a putative RING-H2 finger protein RHA3b.","AT4G01610","ATCATHB3",2281.4,0.79984,0.10263,7.7937,{"v":6.51e-15,"d":"6.51E-15"},{"v":1.62e-13,"d":"1.62E-13"},"Cysteine proteinases superfamily protein.","AT4G10960","UGE5",169.58,1.9389,0.22875,8.4761,{"v":2.33e-17,"d":"2.33E-17"},{"v":5.64e-16,"d":"5.64E-16"},"full_name=UDP-D-glucose/UDP-D-galactose 4-epimerase 5. UDP-D-glucose/UDP-D-galactose 4-epimerase 5. Encodes a protein with UDP-D-glucose 4-epimerase activity.","AT1G12600",null,65.573,-5.4476,0.53402,-10.201,1.96E-24,{"v":4.59e-23,"d":"4.59E-23"},"UDP-N-acetylglucosamine (UAA) transporter family.","AT3G01540","DRH1",1027.4,0.65328,0.084096,7.7683,7.96E-15,{"v":1.81e-13,"d":"1.81E-13"},"full_name=DEAD box RNA helicase 1. DEAD box RNA helicase 1. RNA HELICASE DRH1"]
["AT3G07970","QRT2",201.22,-1.2054,0.16707,-7.2149,{"v":5.4e-13,"d":"5.40E-13"},1.39E-11,"full_name=QUARTET 2. Pectin lyase-like superfamily protein. Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.","AT2G26150","HSFA2",235.06,1.9845,0.25466,7.7926,{"v":6.57e-15,"d":"6.57E-15"},{"v":1.64e-13,"d":"1.64E-13"},"full_name=heat shock transcription factor A2. heat shock transcription factor A2. member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.","AT3G53510","ABCG20",522.44,-1.3825,0.16318,-8.4723,2.41E-17,{"v":5.81e-16,"d":"5.81E-16"},"full_name=ATP-binding cassette G20. ABC-2 type transporter family protein. Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16).","AT2G21820",null,9030.4,0.96946,0.095059,10.199,{"v":2.01e-24,"d":"2.01E-24"},{"v":4.7e-23,"d":"4.70E-23"},"seed maturation protein.","AT1G07350","SR45a",436.7,-1.2629,0.16265,-7.7644,{"v":8.2e-15,"d":"8.20E-15"},{"v":1.87e-13,"d":"1.87E-13"},"full_name=serine/arginine rich-like protein 45a. RNA-binding (RRM/RBD/RNP motifs) family protein. Encodes a serine/arginine rich-like protein, SR45a. Involved in the regulation of stress-responsive alternative splicing."]
["AT1G12064",null,791.57,0.88088,0.12212,7.2133,5.46E-13,{"v":1.4E-11,"d":"1.40E-11"},"transmembrane protein.","AT4G19390",null,259.09,1.2686,0.163,7.7832,{"v":7.07e-15,"d":"7.07E-15"},{"v":1.76e-13,"d":"1.76E-13"},"Uncharacterized protein family (UPF0114).","AT5G56220",null,87.928,-2.3383,0.27607,-8.4701,{"v":2.45e-17,"d":"2.45E-17"},{"v":5.92e-16,"d":"5.92E-16"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT2G05920","SBT1.8",1084.2,-0.98046,0.096148,-10.197,{"v":2.04e-24,"d":"2.04E-24"},{"v":4.75e-23,"d":"4.75E-23"},"Subtilase family protein.","AT4G02690","LFG3",2309.3,-0.77944,0.10043,-7.7609,{"v":8.44e-15,"d":"8.44E-15"},{"v":1.92e-13,"d":"1.92E-13"},"Bax inhibitor-1 family protein."]
["AT4G11910","NYE2",358.06,1.3064,0.18132,7.2046,{"v":5.82e-13,"d":"5.82E-13"},{"v":1.49e-11,"d":"1.49E-11"},"STAY-GREEN-like protein. Acts antagonistically with SGR1 to balance chlorophyll catabolism in chloroplasts with the dismantling and remobilizing of other cellular components in senescing leaf cells.","AT5G53470","ACBP1",451.61,0.97154,0.12484,7.782,{"v":7.14e-15,"d":"7.14E-15"},1.77E-13,"full_name=acyl-CoA binding protein 1. acyl-CoA binding protein 1. Encodes an acyl-CoA binding protein that is localized to vesicles,and plasma membrane especially in epidermal cells of heart, torpedo and cotyledon stage embryos, cell wall of the seed coat. Northern blot analysis showed that the 1.4 kb ACBP1 mRNA was expressed in silique, root, stem, leaf and flower.","AT1G47980",null,2194.6,0.94987,0.11218,8.4674,2.51E-17,{"v":6.05e-16,"d":"6.05E-16"},"desiccation-like protein.","AT4G01070","GT72B1",59.075,-3.7829,0.3712,-10.191,{"v":2.17e-24,"d":"2.17E-24"},{"v":5.06e-23,"d":"5.06E-23"},"UDP-Glycosyltransferase superfamily protein. the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta","AT5G66420",null,1258.5,-0.61094,0.078756,-7.7573,{"v":8.67e-15,"d":"8.67E-15"},{"v":1.97e-13,"d":"1.97E-13"},"TIM-barrel signal transduction protein."]
["AT1G68890","PHYLLO",55.14,-2.2265,0.3091,-7.203,{"v":5.89e-13,"d":"5.89E-13"},{"v":1.51e-11,"d":"1.51E-11"},"full_name=PHYLLO. 2-oxoglutarate decarboxylase/hydro-lyase/magnesium ion-binding protein. Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis.","AT2G42950",null,545.51,1.0392,0.1336,7.7787,{"v":7.33e-15,"d":"7.33E-15"},{"v":1.82e-13,"d":"1.82E-13"},"Magnesium transporter CorA-like family protein.","AT1G66760",null,90.471,2.2568,0.26677,8.4597,{"v":2.68e-17,"d":"2.68E-17"},{"v":6.45e-16,"d":"6.45E-16"},"MATE efflux family protein.","AT4G17550","G3Pp4",843.51,-1.0146,0.099559,-10.191,2.19E-24,5.08E-23,"full_name=glycerol-3-phosphate permease 4. Major facilitator superfamily protein. Encodes a member of the phosphate starvation-induced glycerol-3-phosphate permease gene family: AT3G47420(G3Pp1), AT4G25220(G3Pp2), AT1G30560(G3Pp3), AT4G17550(G3Pp4) and AT2G13100(G3Pp5).","AT4G32290",null,662.38,-0.80374,0.10366,-7.7533,{"v":8.95e-15,"d":"8.95E-15"},{"v":2.03e-13,"d":"2.03E-13"},"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein."]
["AT5G07530","GRP17",83.03,2.5833,0.35875,7.2009,{"v":5.98e-13,"d":"5.98E-13"},{"v":1.53e-11,"d":"1.53E-11"},"full_name=glycine rich protein 17. glycine rich protein 17. encodes a glycine-rich protein that has oleosin domain and is expressed specifically during flower stages 10 to 12. Protein is found on mature pollen coat.","AT4G03400","DFL2",252.49,1.1993,0.15427,7.7745,{"v":7.57e-15,"d":"7.57E-15"},{"v":1.88e-13,"d":"1.88E-13"},"full_name=DWARF IN LIGHT 2. Auxin-responsive GH3 family protein. Encodes a GH3-related gene involved in red light-specific hypocotyl elongation. Analysis of sense and antisense transgenic plants suggests that DFL2 is located downstream of red light signal transduction and determines the degree of hypocotyl elongation.","AT1G69830","AMY3",558.18,-1.0679,0.12628,-8.4563,{"v":2.76e-17,"d":"2.76E-17"},{"v":6.63e-16,"d":"6.63E-16"},"full_name=alpha-amylase-like 3. alpha-amylase-like 3. Encodes a plastid-localized &#945;-amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation. Expression follows circadian rhythms.","AT5G03860","MLS",13544,1.1553,0.11338,10.19,{"v":2.2E-24,"d":"2.20E-24"},{"v":5.12e-23,"d":"5.12E-23"},"full_name=malate synthase. malate synthase. Encodes a protein with malate synthase activity.","AT1G31170","SRX",362.54,-0.99332,0.12812,-7.7532,{"v":8.96e-15,"d":"8.96E-15"},{"v":2.03e-13,"d":"2.03E-13"},"full_name=sulfiredoxin. sulfiredoxin. encodes a cysteine-sulfinic acid reductase (sulfiredoxin - EC 1.8.98.2) capable of reducing overoxidized plastidic 2-Cys-Prx involved in peroxide detoxification and response to oxidative stress"]
["AT5G41700","UBC8",760.84,-0.84362,0.11721,-7.1973,{"v":6.14e-13,"d":"6.14E-13"},{"v":1.57e-11,"d":"1.57E-11"},"full_name=ubiquitin conjugating enzyme 8. ubiquitin conjugating enzyme 8. One of the polypeptides that constitute the ubiquitin-conjugating enzyme E2","AT4G39350","CESA2",2014.5,-0.65636,0.084497,-7.7678,{"v":7.99e-15,"d":"7.99E-15"},{"v":1.98e-13,"d":"1.98E-13"},"full_name=cellulose synthase A2. cellulose synthase A2. Encodes a cellulose synthase isomer, related to CESA6. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.","AT2G33860","ETT",127.19,-2.1079,0.24929,-8.4557,{"v":2.77e-17,"d":"2.77E-17"},{"v":6.66e-16,"d":"6.66E-16"},"full_name=ETTIN. Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein. ettin (ett) mutations have pleiotropic effects on Arabidopsis flower development, causing increases in perianth organ number, decreases in stamen number and anther formation, and apical-basal patterning defects in the gynoecium. The ETTIN gene encodes a protein with homology to DNA binding proteins which bind to auxin response elements. ETT transcript is expressed throughout stage 1 floral meristems and subsequently resolves to a complex pattern within petal, stamen and carpel primordia. ETT probably functions to impart regional identity in floral meristems that affects perianth organ number spacing, stamen formation, and regional differentiation in stamens and the gynoecium. During stage 5, ETT expression appears in a ring at the top of the floral meristem before morphological appearance of the gynoecium, consistent with the proposal that ETT is involved in prepatterning apical and basal boundaries in the gynoecium primordium. It is a target of the ta-siRNA tasiR-ARF.","AT1G69530","EXPA1",228.23,-9.0063,0.88417,-10.186,{"v":2.29e-24,"d":"2.29E-24"},{"v":5.3e-23,"d":"5.30E-23"},"full_name=expansin A1. expansin A1. Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","AT3G14172",null,112.18,1.7334,0.22367,7.7498,{"v":9.2e-15,"d":"9.20E-15"},2.08E-13,"GPI-anchored adhesin-like protein."]
["AT1G09210","CRT1b",693.02,-0.84636,0.11765,-7.194,{"v":6.29e-13,"d":"6.29E-13"},{"v":1.6E-11,"d":"1.60E-11"},"full_name=calreticulin 1b. calreticulin 1b. Encodes one of three Arabidopsis calreticulins.","AT5G62390","BAG7",419.29,-1.001,0.12888,-7.767,{"v":8.04e-15,"d":"8.04E-15"},{"v":1.99e-13,"d":"1.99E-13"},"full_name=BCL-2-associated athanogene 7. BCL-2-associated athanogene 7. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. Localized to the ER. Necessary for the proper maintenance of the unfolded protein response during heat and cold tolerance.","AT1G75540","BBX21",653.96,1.0379,0.12277,8.4536,{"v":2.82e-17,"d":"2.82E-17"},{"v":6.77e-16,"d":"6.77E-16"},"full_name=B-box domain protein 21. salt tolerance homolog2. Encodes a B-box zinc finger transcription factor BBX21 (also named STH2/salt tolerance homolog2 and LHUS/long hypocotyl under shade). Interacts with COP1 to control de-etiolation. Also genetically interacts with COP1 to regulate shade avoidance.","AT1G72660","DRG1-3",217.76,2.1363,0.20987,10.179,2.45E-24,{"v":5.68e-23,"d":"5.68E-23"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT1G03106",null,3047.9,1.034,0.13352,7.7441,{"v":9.63e-15,"d":"9.63E-15"},{"v":2.17e-13,"d":"2.17E-13"},"hypothetical protein."]
["AT5G08260","scpl35",205.85,-1.2615,0.17536,-7.1939,{"v":6.3e-13,"d":"6.30E-13"},{"v":1.6E-11,"d":"1.60E-11"},"full_name=serine carboxypeptidase-like 35. serine carboxypeptidase-like 35.","AT3G44300","NIT2",99.306,-1.7945,0.23106,-7.7664,{"v":8.07e-15,"d":"8.07E-15"},{"v":1.99e-13,"d":"1.99E-13"},"full_name=nitrilase 2. nitrilase 2. Encodes an enzyme that catalyzes the hydrolysis of indole-3-acetonitrile (IAN) to indole-3-acetic acid (IAA) (nitrile aminohydrolase, EC 3.5.5.1) and IAN to indole-3-acetamide (IAM) at lower levels. Mutants have reduced sensitivity to IAN and are sensitive to IAA. This enzyme likely participates in other non-auxin-related metabolic pathways.","AT4G26590","OPT5",931.08,-0.89809,0.10638,-8.4424,{"v":3.11e-17,"d":"3.11E-17"},{"v":7.44e-16,"d":"7.44E-16"},"full_name=oligopeptide transporter 5. oligopeptide transporter 5. oligopeptide transporter","AT1G17810","BETA-TIP",20378,-0.72356,0.071089,-10.178,2.48E-24,{"v":5.74e-23,"d":"5.74E-23"},"full_name=beta-tonoplast intrinsic protein. beta-tonoplast intrinsic protein. beta-tonoplast intrinsic protein (beta-TIP) mRNA, complete","AT4G19210","ABCE2",2138.3,0.52439,0.067724,7.7431,{"v":9.7e-15,"d":"9.70E-15"},2.19E-13,"full_name=ATP-binding cassette E2. RNAse l inhibitor protein 2. member of RLI subfamily"]
["AT2G43800","FH2",325.42,-1.3089,0.18208,-7.1884,{"v":6.56e-13,"d":"6.56E-13"},{"v":1.67e-11,"d":"1.67E-11"},"Actin-binding FH2 (formin homology 2) family protein.","AT1G62070",null,49.749,-2.6953,0.34725,-7.7619,{"v":8.36e-15,"d":"8.36E-15"},{"v":2.06e-13,"d":"2.06E-13"},"hypothetical protein.","AT5G54160","OMT1",822.28,-1.1653,0.13804,-8.4416,{"v":3.13e-17,"d":"3.13E-17"},{"v":7.48e-16,"d":"7.48E-16"},"full_name=O-methyltransferase 1. O-methyltransferase 1. A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3?-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3?-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase","AT1G05000","PFA-DSP1",69.507,-4.2712,0.4197,-10.177,{"v":2.52e-24,"d":"2.52E-24"},{"v":5.82e-23,"d":"5.82E-23"},"full_name=plant and fungi atypical dual-speci&#64257;city phosphatase 1. Phosphotyrosine protein phosphatases superfamily protein. Encodes an atypical dual-speci&#64257;city phosphatase.","AT2G24050","eIFiso4G2",535.76,0.79308,0.10258,7.7316,1.06E-14,{"v":2.39e-13,"d":"2.39E-13"},"full_name=eukaryotic translation Initiation Factor isoform 4G2. MIF4G domain-containing protein / MA3 domain-containing protein. Encodes a putative eukaryotic translation initiation factor."]
["AT2G31985",null,72.302,2.0516,0.28556,7.1843,{"v":6.76e-13,"d":"6.76E-13"},{"v":1.72e-11,"d":"1.72E-11"},"lipoprotein (DUF1264).","AT2G35450",null,57.538,-2.4602,0.31725,-7.7549,{"v":8.84e-15,"d":"8.84E-15"},{"v":2.18e-13,"d":"2.18E-13"},"catalytic/ hydrolase.","AT5G52230","MBD13",339.68,-1.4394,0.17081,-8.4271,3.54E-17,{"v":8.46e-16,"d":"8.46E-16"},"full_name=methyl-CPG-binding domain protein 13. methyl-CPG-binding domain protein 13. Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.","AT5G48880","KAT5",75.355,-3.2383,0.31836,-10.172,{"v":2.66e-24,"d":"2.66E-24"},{"v":6.13e-23,"d":"6.13E-23"},"full_name=3-KETO-ACYL-COENZYME A THIOLASE 5. peroxisomal 3-keto-acyl-CoA thiolase 2. Encodes a peroxisomal 3-keto-acyl-CoA thiolase 2 precursor. EC2.3.1.16 thiolases. AT5G48880.1 is named PKT1 and AT5G48880.2 is named PKT2.","AT4G37180","UIF1",75.003,2.7087,0.35053,7.7276,{"v":1.1E-14,"d":"1.10E-14"},{"v":2.46e-13,"d":"2.46E-13"},"Homeodomain-like superfamily protein. myb family transcription factor, contains Pfam domain, PF00249: Myb-like DNA-binding domain l; also isolated as a putative cytoskeletal protein in a yeast screen"]
["AT1G27770","ACA1",152.93,-1.633,0.22731,-7.1839,{"v":6.78e-13,"d":"6.78E-13"},{"v":1.72e-11,"d":"1.72E-11"},"full_name=autoinhibited Ca2+-ATPase 1. autoinhibited Ca2+-ATPase 1. Encodes a chloroplast envelope Ca2+-ATPase with an N-terminal autoinhibitor.","AT1G68540","TKPR2",316.05,-1.1893,0.15364,-7.7406,{"v":9.9e-15,"d":"9.90E-15"},{"v":2.43e-13,"d":"2.43E-13"},"full_name=tetraketide alpha-pyrone reductase 2. NAD(P)-binding Rossmann-fold superfamily protein.","AT3G05180",null,65.732,-2.6629,0.31601,-8.4266,{"v":3.56e-17,"d":"3.56E-17"},{"v":8.48e-16,"d":"8.48E-16"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT1G78580","TPS1",1394.8,-0.98397,0.097017,-10.142,{"v":3.59e-24,"d":"3.59E-24"},{"v":8.27e-23,"d":"8.27E-23"},"full_name=trehalose-6-phosphate synthase. trehalose-6-phosphate synthase. Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division.","AT5G05110",null,741.24,-0.76283,0.098741,-7.7255,1.11E-14,{"v":2.5e-13,"d":"2.50E-13"},"Cystatin/monellin family protein."]
["AT5G24490",null,303.65,-1.5737,0.21923,-7.1782,{"v":7.06e-13,"d":"7.06E-13"},{"v":1.79e-11,"d":"1.79E-11"},"30S ribosomal protein.","AT3G06850","BCE2",210.69,-1.2555,0.16221,-7.7403,{"v":9.92e-15,"d":"9.92E-15"},{"v":2.44e-13,"d":"2.44E-13"},"2-oxoacid dehydrogenases acyltransferase family protein. dihydrolipoamide branched chain acyltransferase","AT2G18950","HPT1",228.98,-1.4812,0.17588,-8.4217,{"v":3.71e-17,"d":"3.71E-17"},{"v":8.83e-16,"d":"8.83E-16"},"full_name=homogentisate phytyltransferase 1. homogentisate phytyltransferase 1. Encodes homogentisate phytyltransferase involved in tocopherol biosynthesis. Has impact on seed longevity and plays a role in the adaptation to low temperature stress, notably phloem loading.","AT3G01570",null,24673,-0.58296,0.057509,-10.137,{"v":3.79e-24,"d":"3.79E-24"},8.73E-23,"Oleosin family protein.","AT1G77510","PDIL1-2",321.19,-1.0404,0.13468,-7.7254,1.11E-14,{"v":2.5e-13,"d":"2.50E-13"},"full_name=PDI-like 1-2. PDI-like 1-2. Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response. This protein has been shown to be an attenuator of D1 synthesis, modulating photoinhibition in a light-regulated manner."]
["AT1G51680","4CL1",1552,-0.93198,0.12985,-7.1771,7.12E-13,{"v":1.8e-11,"d":"1.80E-11"},"full_name=4-coumarate:CoA ligase 1. 4-coumarate:CoA ligase 1. encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. In addition to 4-coumarate, it also converts ferulate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, ferulic acid, caffeic acid and 5-OH-ferulic acid. At4CL1 was unable to use sinapic acid as substrate.","AT5G16240","AAD1",1611.5,-0.71712,0.092821,-7.7259,1.11E-14,2.72E-13,"Plant stearoyl-acyl-carrier-protein desaturase family protein.","AT1G71140","DTX14",87.334,2.1491,0.25527,8.419,{"v":3.8e-17,"d":"3.80E-17"},{"v":9.03e-16,"d":"9.03E-16"},"MATE efflux family protein.","AT1G80480","PTAC17",266.74,1.445,0.14259,10.134,{"v":3.9E-24,"d":"3.90E-24"},{"v":8.95e-23,"d":"8.95E-23"},"full_name=plastid transcriptionally active 17. plastid transcriptionally active 17.","AT5G04760","DIV2",554.88,0.98184,0.12711,7.7242,1.13E-14,{"v":2.52e-13,"d":"2.52E-13"},"Duplicated homeodomain-like superfamily protein."]
["AT2G47750","GH3.9",2146.5,-0.73419,0.10231,-7.1763,{"v":7.16e-13,"d":"7.16E-13"},{"v":1.81e-11,"d":"1.81E-11"},"full_name=putative indole-3-acetic acid-amido synthetase GH3.9. putative indole-3-acetic acid-amido synthetase GH3.9. Encodes GH3.9, a member of the GH3 family auxin-responsive genes. gh3.9-1 mutants had greater primary root length, increased sensitivity to indole-3-acetic acid (IAA)-mediated root growth inhibition, but no obvious effects on apical dominance or leaf morphology.","AT1G54360","TAF6B",473.26,-0.90334,0.1171,-7.7145,1.21E-14,2.97E-13,"full_name=TBP-ASSOCIATED FACTOR 6B. TBP-ASSOCIATED FACTOR 6B. Encodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6.","AT3G46670","UGT76E11",131.24,1.8696,0.2221,8.418,{"v":3.83e-17,"d":"3.83E-17"},{"v":9.09e-16,"d":"9.09E-16"},"full_name=UDP-glucosyl transferase 76E11. UDP-glucosyl transferase 76E11.","AT1G26665",null,743.09,1.3932,0.13749,10.134,{"v":3.92e-24,"d":"3.92E-24"},{"v":9e-23,"d":"9.00E-23"},"Mediator complex, subunit Med10.","AT1G62290","PASPA2",1191.5,-0.7118,0.092171,-7.7227,{"v":1.14e-14,"d":"1.14E-14"},{"v":2.55e-13,"d":"2.55E-13"},"Saposin-like aspartyl protease family protein."]
["AT3G54510",null,1030,0.87464,0.122,7.1691,{"v":7.55e-13,"d":"7.55E-13"},{"v":1.91e-11,"d":"1.91E-11"},"Early-responsive to dehydration stress protein (ERD4).","AT5G01890","PXC2",87.78,-1.9121,0.24798,-7.7107,1.25E-14,{"v":3.06e-13,"d":"3.06E-13"},"Leucine-rich receptor-like protein kinase family protein.","AT2G28780",null,126.57,1.9131,0.22736,8.4146,{"v":3.94e-17,"d":"3.94E-17"},{"v":9.35e-16,"d":"9.35E-16"},"P-hydroxybenzoic acid efflux pump subunit.","AT3G14450","CID9",112.2,-2.376,0.23453,-10.131,{"v":4.02e-24,"d":"4.02E-24"},{"v":9.21e-23,"d":"9.21E-23"},"full_name=CTC-interacting domain 9. CTC-interacting domain 9. RNA-binding protein, putative, contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies). Contains PAM PABC binding domain.","AT4G02715",null,516.34,0.93101,0.12063,7.7181,{"v":1.18e-14,"d":"1.18E-14"},{"v":2.64e-13,"d":"2.64E-13"},"flocculation FLO11-like protein."]
["AT1G42970","GAPB",1636.1,-0.70848,0.098867,-7.1659,{"v":7.73e-13,"d":"7.73E-13"},{"v":1.95e-11,"d":"1.95E-11"},"full_name=glyceraldehyde-3-phosphate dehydrogenase B subunit. glyceraldehyde-3-phosphate dehydrogenase B subunit. Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase that can use both NADH and NADPH to reduce 1,3-diphosphate glycerate. It forms A2B2 heterotetramers with GapA forms of the GADPH enzyme. These complexes are active in the light under reducing conditions, but show reduced NADPH-dependent activity in response to oxidized thioredoxins and increased NAD(H)/NADP(H) ratios due to the formation of inactive A8B8 hexadecamers.","AT2G47930","AGP26",56.25,-2.4049,0.31212,-7.7049,{"v":1.31e-14,"d":"1.31E-14"},{"v":3.2E-13,"d":"3.20E-13"},"full_name=arabinogalactan protein 26. arabinogalactan protein 26.","AT5G66310",null,99.819,-2.4317,0.289,-8.4141,{"v":3.96e-17,"d":"3.96E-17"},{"v":9.37e-16,"d":"9.37E-16"},"ATP binding microtubule motor family protein.","AT5G39130",null,74.546,-5.9418,0.58725,-10.118,{"v":4.59e-24,"d":"4.59E-24"},1.05E-22,"RmlC-like cupins superfamily protein.","AT5G48412",null,1900.1,0.90763,0.11762,7.7169,1.19E-14,{"v":2.66e-13,"d":"2.66E-13"},"other_RNA."]
["AT3G28040",null,264.87,-1.2647,0.17662,-7.1605,{"v":8.04e-13,"d":"8.04E-13"},{"v":2.02e-11,"d":"2.02E-11"},"Leucine-rich receptor-like protein kinase family protein.","AT1G70680",null,3214,1.1432,0.14844,7.7014,{"v":1.35e-14,"d":"1.35E-14"},{"v":3.28e-13,"d":"3.28E-13"},"Caleosin-related family protein.","AT3G19820","DWF1",228.18,-1.8817,0.2237,-8.412,{"v":4.03e-17,"d":"4.03E-17"},{"v":9.53e-16,"d":"9.53E-16"},"full_name=DWARF 1. cell elongation protein / DWARF1 / DIMINUTO (DIM). Involved in the conversion of the early brassinosteroid precursor 24-methylenecholesterol to campesterol. Brassinosteroids affect cellular elongation. Mutants have dwarf phenotype. DWF1 is a Ca2+-dependent calmodulin-binding protein.","AT1G45688","CC1",78.681,-2.9206,0.28872,-10.116,{"v":4.71e-24,"d":"4.71E-24"},{"v":1.08e-22,"d":"1.08E-22"},"transmembrane protein.","AT1G30510","RFNR2",104.99,2.2443,0.29102,7.7119,1.24E-14,{"v":2.76e-13,"d":"2.76E-13"},"full_name=root FNR 2. root FNR 2. Encodes a root-type ferredoxin:NADP(H) oxidoreductase."]
["AT3G62590","PLIP3",236.88,-1.1797,0.16487,-7.1554,{"v":8.34e-13,"d":"8.34E-13"},{"v":2.1e-11,"d":"2.10E-11"},"alpha/beta-Hydrolases superfamily protein.","AT2G27380","EPR1",179320,0.98706,0.12828,7.6948,1.42E-14,{"v":3.45e-13,"d":"3.45E-13"},"full_name=extensin proline-rich 1. extensin proline-rich 1. Encodes an extensin like gene involved in seed germination.","AT1G67280","ATGLYI6",811.76,0.97379,0.11585,8.4058,4.25E-17,{"v":1e-15,"d":"1.00E-15"},"Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.","AT4G19810","ChiC",61.087,-3.4747,0.34356,-10.114,4.79E-24,{"v":1.09e-22,"d":"1.09E-22"},"full_name=class V chitinase. Glycosyl hydrolase family protein with chitinase insertion domain-containing protein. ChiC encodes a Class V chitinase that is a part of glycoside hydrolase family 18 based on CAZy groupings. It appears to primarily act as an exochitinase in vitro where it predominantly cleaves a chitobiose (GlcNAc)2 residue from the non-reducing end of a chitin oligosaccharide. However, it shows some minor endochitinase activity in vitro, as well. A putative 24 amino-acid signal peptide may direct this protein to the secretory system and it has been detected in cell wall apoplastic fluid. RT-PCR experiments demonstrate that ChiC transcript levels are increased in response to abscisisc acid, jasmonic acid, and NaCl stress. Microarray results also suggest that transcript levels rise in response to osmotic stress, two fungal pathogens, a bacterial pathogen, and the elicitor flagellin.","AT3G12320","LNK3",201.2,1.2327,0.15995,7.7064,{"v":1.29e-14,"d":"1.29E-14"},{"v":2.88e-13,"d":"2.88E-13"},"hypothetical protein."]
["AT4G13345","MEE55",437.11,0.86362,0.12074,7.1527,{"v":8.51e-13,"d":"8.51E-13"},2.13E-11,"full_name=maternal effect embryo arrest 55. Serinc-domain containing serine and sphingolipid biosynthesis protein.","AT4G31860",null,1079.3,0.7689,0.099939,7.6937,1.43E-14,{"v":3.48e-13,"d":"3.48E-13"},"Protein phosphatase 2C family protein.","AT4G09020","ISA3",573.51,-1.314,0.15654,-8.3941,{"v":4.69e-17,"d":"4.69E-17"},{"v":1.11e-15,"d":"1.11E-15"},"full_name=isoamylase 3. isoamylase 3. Encodes an isoamylase-like protein. Mutant studies show that the gene is strongly involved in starch breakdown. A GUS-protein fusion product was shown to localize to the surface of chloroplastic structures reminiscent of starch granules. In the mutants, the chloroplastic &#945;-amylase AMY3 is upregulated.","AT5G20250","DIN10",77.509,-3.2361,0.32005,-10.111,{"v":4.93e-24,"d":"4.93E-24"},{"v":1.12e-22,"d":"1.12E-22"},"full_name=DARK INDUCIBLE 10. Raffinose synthase family protein. encodes a member of glycosyl hydrolase family 36. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.","AT5G26780","SHM2",903.41,-0.62622,0.081359,-7.697,{"v":1.39e-14,"d":"1.39E-14"},3.09E-13,"full_name=serine hydroxymethyltransferase 2. serine hydroxymethyltransferase 2. Encodes a protein with serine hydroxymethyltransferase activity which is thought to be localized in the mitochondrial matrix. SHM2 expression fails to rescue the conditional lethal phenotype of the shm1-1 mutant, defective in SHM1."]
["AT5G48360","FH9",345.74,-1.3469,0.18857,-7.1427,{"v":9.15e-13,"d":"9.15E-13"},2.29E-11,"Actin-binding FH2 (formin homology 2) family protein.","AT1G17190","GSTU26",130.73,-1.4952,0.1944,-7.6916,{"v":1.45e-14,"d":"1.45E-14"},{"v":3.53e-13,"d":"3.53E-13"},"full_name=glutathione S-transferase tau 26. glutathione S-transferase tau 26. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","AT2G29190","PUM2",529.2,1.011,0.12044,8.394,{"v":4.7E-17,"d":"4.70E-17"},{"v":1.11e-15,"d":"1.11E-15"},"full_name=pumilio 2. pumilio 2. Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.","AT2G18700","TPS11",888.61,1.6883,0.16704,10.108,{"v":5.12e-24,"d":"5.12E-24"},{"v":1.16e-22,"d":"1.16E-22"},"full_name=trehalose phosphatase/synthase 11. trehalose phosphatase/synthase 11. Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.","AT3G48890","MAPR3",1040,-0.67031,0.08716,-7.6906,{"v":1.46e-14,"d":"1.46E-14"},{"v":3.25e-13,"d":"3.25E-13"},"full_name=membrane-associated progesterone binding protein 3. membrane-associated progesterone binding protein 3. putative progesterone-binding protein homolog (Atmp2) mRNA,"]
["AT2G35820",null,215.54,-1.1251,0.15758,-7.1398,{"v":9.35e-13,"d":"9.35E-13"},{"v":2.34e-11,"d":"2.34E-11"},"ureidoglycolate hydrolase.","AT3G55430",null,383.87,0.99769,0.12977,7.6881,{"v":1.49e-14,"d":"1.49E-14"},{"v":3.62e-13,"d":"3.62E-13"},"O-Glycosyl hydrolases family 17 protein.","AT4G28020",null,62.899,2.622,0.31244,8.3918,{"v":4.79e-17,"d":"4.79E-17"},{"v":1.12e-15,"d":"1.12E-15"},"tRNA-thr(GGU) m(6)t(6)A37 methyltransferase.","AT4G14930",null,82.096,-2.7919,0.27639,-10.101,{"v":5.45e-24,"d":"5.45E-24"},1.24E-22,"Survival protein SurE-like phosphatase/nucleotidase.","AT5G02810","PRR7",928.48,-0.62815,0.081764,-7.6825,{"v":1.56e-14,"d":"1.56E-14"},{"v":3.45e-13,"d":"3.45E-13"},"full_name=pseudo-response regulator 7. pseudo-response regulator 7. PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR7 expression levels. Acts as transcriptional repressor of CCA1 and LHY."]
["AT2G43520","TI2",4004.2,-0.70911,0.099365,-7.1364,{"v":9.58e-13,"d":"9.58E-13"},2.39E-11,"full_name=trypsin inhibitor protein 2. trypsin inhibitor protein 2. Encodes putative trypsin inhibitor protein which may function in defense against herbivory. Member of the defensin-like (DEFL) family.","AT2G33150","PKT3",4532.2,0.5788,0.0753,7.6866,1.51E-14,{"v":3.66e-13,"d":"3.66E-13"},"full_name=peroxisomal 3-ketoacyl-CoA thiolase 3. peroxisomal 3-ketoacyl-CoA thiolase 3. Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase.","AT1G07645","DSI-1VOC",3127.4,1.1193,0.13341,8.3896,{"v":4.88e-17,"d":"4.88E-17"},1.15E-15,"full_name=dessication-induced 1VOC superfamily protein. dessication-induced 1VOC superfamily protein.","AT1G27330",null,110.97,-2.3627,0.23396,-10.099,{"v":5.6e-24,"d":"5.60E-24"},1.27E-22,"Ribosome associated membrane protein RAMP4.","AT4G35240",null,1205.5,0.58656,0.076384,7.6792,{"v":1.6e-14,"d":"1.60E-14"},{"v":3.54e-13,"d":"3.54E-13"},"DNA-directed RNA polymerase subunit beta, putative (DUF630 and DUF632)."]
["AT3G60290",null,567.56,0.92376,0.12946,7.1356,{"v":9.64e-13,"d":"9.64E-13"},{"v":2.4e-11,"d":"2.40E-11"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT1G55850","CSLE1",42.462,3.1497,0.40978,7.6862,{"v":1.52e-14,"d":"1.52E-14"},{"v":3.66e-13,"d":"3.66E-13"},"full_name=cellulose synthase like E1. cellulose synthase like E1. encodes a protein similar to cellulose synthase","AT1G15330",null,294.52,1.5321,0.18284,8.3794,5.32E-17,1.25E-15,"Cystathionine beta-synthase (CBS) protein.","AT2G22080",null,1367.1,-0.96078,0.095231,-10.089,{"v":6.19e-24,"d":"6.19E-24"},{"v":1.4E-22,"d":"1.40E-22"},"transmembrane protein.","AT2G43400","ETFQO",376.67,-0.93974,0.12245,-7.6747,1.66E-14,{"v":3.66e-13,"d":"3.66E-13"},"full_name=electron-transfer flavoprotein:ubiquinone oxidoreductase. electron-transfer flavoprotein:ubiquinone oxidoreductase. Encodes a unique electron-transfer flavoprotein:ubiquinone oxidoreductase that is localized to the mitochondrion. Mutants are more sensitive to sugar starvation when plants are kept in the dark for long periods."]
["AT1G66430","FRK3",1579.9,-0.81502,0.11426,-7.1333,{"v":9.8e-13,"d":"9.80E-13"},{"v":2.44e-11,"d":"2.44E-11"},"pfkB-like carbohydrate kinase family protein.","AT1G15290","REC3",46.009,-2.7908,0.36339,-7.6798,1.59E-14,{"v":3.85e-13,"d":"3.85E-13"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT3G13640","ABCE1",104.98,-1.9733,0.23559,-8.3759,{"v":5.48e-17,"d":"5.48E-17"},{"v":1.28e-15,"d":"1.28E-15"},"full_name=ATP-binding cassette E1. RNAse l inhibitor protein 1. member of RLI subfamily","AT3G01990","ACR6",339.02,1.5406,0.15276,10.085,{"v":6.43e-24,"d":"6.43E-24"},1.46E-22,"full_name=ACT domain repeat 6. ACT domain repeat 6. Member of a small family of ACT domain containing proteins in Arabidopsis. ACT domains are involved in amino acid binding.","AT2G18570",null,2457.2,-0.69463,0.090559,-7.6705,{"v":1.71e-14,"d":"1.71E-14"},3.78E-13,"UDP-Glycosyltransferase superfamily protein."]
["AT2G16720","MYB7",92.57,-1.7142,0.24062,-7.1241,1.05E-12,{"v":2.61e-11,"d":"2.61E-11"},"full_name=myb domain protein 7. myb domain protein 7. Encodes a member of MYB3R- and R2R3- type MYB- encoding gene family that acts as a repressor of flavonol biosynthesis. AtMYB7 gene expression is induced by salt treatment.","AT2G32720","CB5-B",333.25,-1.1388,0.14834,-7.6767,{"v":1.63e-14,"d":"1.63E-14"},{"v":3.94e-13,"d":"3.94E-13"},"full_name=cytochrome B5 isoform B. cytochrome B5 isoform B. member of Cytochromes b5","AT2G35620","FEI2",84.92,-2.2343,0.26701,-8.368,{"v":5.86e-17,"d":"5.86E-17"},1.37E-15,"full_name=FEI 2. Leucine-rich repeat protein kinase family protein. Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots.","AT3G14230","RAP2.2",926.16,0.99497,0.098765,10.074,{"v":7.19e-24,"d":"7.19E-24"},1.62E-22,"full_name=related to AP2 2. related to AP2 2. encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.2). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.","AT3G54540","ABCF4",1293,0.59335,0.077359,7.6702,{"v":1.72e-14,"d":"1.72E-14"},3.78E-13,"full_name=ATP-binding cassette F4. general control non-repressible 4. member of GCN subfamily"]
["AT5G11720","AGLU1",93.876,-1.7655,0.24788,-7.1226,{"v":1.06e-12,"d":"1.06E-12"},{"v":2.63e-11,"d":"2.63E-11"},"Glycosyl hydrolases family 31 protein.","AT4G25230","RIN2",998.09,0.73067,0.095203,7.6748,1.66E-14,{"v":3.99e-13,"d":"3.99E-13"},"full_name=RPM1 interacting protein 2. RPM1 interacting protein 2. RPM1 interacting protein 2, has a CUE domain which is sufficient for the interaction with RPM1.Positive regulator of RPM1 and PRS2 mediated hypersensitive response.Functions as ubiquitin ligase and binds to RPM1.","AT4G19390",null,491.48,1.1032,0.13196,8.3604,{"v":6.25e-17,"d":"6.25E-17"},{"v":1.46e-15,"d":"1.46E-15"},"Uncharacterized protein family (UPF0114).","AT1G55210",null,81.264,-2.9071,0.28873,-10.069,{"v":7.61e-24,"d":"7.61E-24"},1.72E-22,"Disease resistance-responsive (dirigent-like protein) family protein.","AT2G44100","GDI1",3043.7,-0.48706,0.063534,-7.6661,1.77E-14,{"v":3.9E-13,"d":"3.90E-13"},"full_name=guanosine nucleotide diphosphate dissociation inhibitor 1. guanosine nucleotide diphosphate dissociation inhibitor 1. GDP dissociation inhibitor involved in vesicular membrane traffic"]
["AT5G07870",null,45.28,-2.5598,0.36005,-7.1097,{"v":1.16e-12,"d":"1.16E-12"},{"v":2.89e-11,"d":"2.89E-11"},"HXXXD-type acyl-transferase family protein.","AT3G61880","CYP78A9",11044,0.91582,0.11939,7.6709,{"v":1.71e-14,"d":"1.71E-14"},{"v":4.1e-13,"d":"4.10E-13"},"full_name=cytochrome p450 78a9. cytochrome p450 78a9. Encodes a cytochrome p450 monooxygenase. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis.","AT3G25780","AOC3",79.527,2.4872,0.29771,8.3544,6.57E-17,1.53E-15,"full_name=allene oxide cyclase 3. allene oxide cyclase 3. Encodes allene oxide cyclase, one of the enzymes involved in jasmonic acid biosynthesis. One of four genes in Arabidopsis that encode this enzyme. mRNA expression is upregulated in senescing leaves. Note: Nomenclature for Arabidopsis allene oxide cyclase 3 (AOC3, AT3G25780) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC3 (AT3G25780) is also referred to as AOC2 in He et al. 2002 Plant Physiology, 128:876-884.","AT1G16750",null,59.004,-4.3234,0.4296,-10.064,{"v":7.99e-24,"d":"7.99E-24"},{"v":1.8e-22,"d":"1.80E-22"},"GPI-anchored adhesin-like protein, putative (Protein of unknown function, DUF547).","AT5G53270",null,501,-1.0857,0.14171,-7.6617,{"v":1.83e-14,"d":"1.83E-14"},4.03E-13,"Seed maturation protein."]
["AT4G14980",null,577.82,1.1312,0.15912,7.1088,{"v":1.17e-12,"d":"1.17E-12"},{"v":2.9E-11,"d":"2.90E-11"},"Cysteine/Histidine-rich C1 domain family protein.","AT4G25130","PMSR4",1081.3,0.87592,0.11428,7.665,{"v":1.79e-14,"d":"1.79E-14"},{"v":4.29e-13,"d":"4.29E-13"},"full_name=peptide met sulfoxide reductase 4. peptide met sulfoxide reductase 4. Encodes a chloroplast-localized methionine sulfoxide reductase that is a member of the MSRA family. Involved in protection of chloroplasts from oxidative stress.","AT5G49690",null,45.08,5.6522,0.67826,8.3333,{"v":7.86e-17,"d":"7.86E-17"},{"v":1.83e-15,"d":"1.83E-15"},"UDP-Glycosyltransferase superfamily protein.","AT1G72220","ATL54",63.085,-4.6636,0.46352,-10.061,{"v":8.2e-24,"d":"8.20E-24"},{"v":1.84e-22,"d":"1.84E-22"},"RING/U-box superfamily protein.","AT1G23820","SPDS1",728.79,0.7178,0.093726,7.6585,{"v":1.88e-14,"d":"1.88E-14"},{"v":4.13e-13,"d":"4.13E-13"},"full_name=spermidine synthase 1. spermidine synthase. Spermidine synthase."]
["AT4G12910","scpl20",76.708,-1.8973,0.2671,-7.1033,{"v":1.22e-12,"d":"1.22E-12"},{"v":3.01e-11,"d":"3.01E-11"},"full_name=serine carboxypeptidase-like 20. serine carboxypeptidase-like 20.","AT4G27150","SESA2",202310,-0.74381,0.097077,-7.6621,{"v":1.83e-14,"d":"1.83E-14"},4.39E-13,"full_name=seed storage albumin 2. seed storage albumin 2.","AT1G16300","GAPCP-2",58.115,2.5487,0.30612,8.3258,{"v":8.37e-17,"d":"8.37E-17"},{"v":1.95e-15,"d":"1.95E-15"},"full_name=glyceraldehyde-3-phosphate dehydrogenase of plastid 2. glyceraldehyde-3-phosphate dehydrogenase of plastid 2. Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots.","AT4G11240","TOPP7",314.08,1.4622,0.14537,10.059,{"v":8.4e-24,"d":"8.40E-24"},1.89E-22,"Calcineurin-like metallo-phosphoesterase superfamily protein. encodes a type I serine/threonine protein phosphatase expressed in expressed in roots, rosettes and flowers.","AT2G23070","CKA4",838.8,0.66893,0.087365,7.6568,{"v":1.91e-14,"d":"1.91E-14"},{"v":4.18e-13,"d":"4.18E-13"},"Protein kinase superfamily protein."]
["AT3G50840",null,35.677,-3.1382,0.44184,-7.1026,{"v":1.22e-12,"d":"1.22E-12"},{"v":3.02e-11,"d":"3.02E-11"},"Phototropic-responsive NPH3 family protein.","AT3G52930","FBA8",1295.5,-0.9567,0.12497,-7.6557,1.92E-14,{"v":4.6e-13,"d":"4.60E-13"},"full_name=fructose-bisphosphate aldolase 8. Aldolase superfamily protein.","AT5G59540",null,37.679,4.0158,0.48256,8.3219,{"v":8.66e-17,"d":"8.66E-17"},{"v":2.01e-15,"d":"2.01E-15"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT1G78300","GRF2",98.96,-2.7805,0.27668,-10.05,{"v":9.22e-24,"d":"9.22E-24"},{"v":2.07e-22,"d":"2.07E-22"},"full_name=general regulatory factor 2. general regulatory factor 2. G-box binding factor GF14 omega encoding a 14-3-3 protein","AT1G31810","AFH14",542.91,-0.76719,0.10024,-7.6538,{"v":1.95e-14,"d":"1.95E-14"},4.27E-13,"full_name=Formin Homology 14. Formin Homology 14. Encodes the Type II Arabidopsis formin14. Interacts with microtubules and microfilaments to regulate cell division."]
["AT5G55240","ATPXG2",7677.2,0.64859,0.091381,7.0976,1.27E-12,{"v":3.13e-11,"d":"3.13E-11"},"full_name=ARABIDOPSIS THALIANA PEROXYGENASE 2. PEROXYGENASE 2. Catalyze hydroperoxide-dependent mono-oxygenation reactions. Require calcium for peroxygenase activity. Probably deeply buried in lipid droplets or microsomes.","AT3G12920","BRG3",325.62,1.2852,0.16795,7.6523,{"v":1.97e-14,"d":"1.97E-14"},{"v":4.72e-13,"d":"4.72E-13"},"full_name=BOI-related gene 3. SBP (S-ribonuclease binding protein) family protein. Encodes one of the BRGs (BOI-related gene) involved in resistance to Botrytis cinerea.","AT5G06530","ABCG22",43.676,-4.1112,0.49404,-8.3217,{"v":8.67e-17,"d":"8.67E-17"},{"v":2.01e-15,"d":"2.01E-15"},"full_name=ATP-binding cassette G22. ABC-2 type transporter family protein. Encodes ABCG22, an ABC transporter gene. Mutation results in increased water transpiration and drought susceptibility.","AT3G19580","ZF2",380.03,-1.4961,0.14889,-10.048,{"v":9.35e-24,"d":"9.35E-24"},{"v":2.1e-22,"d":"2.10E-22"},"full_name=zinc-finger protein 2. zinc-finger protein 2. Encodes zinc finger protein. mRNA levels are upregulated in response to ABA, high salt, and mild dessication. The protein is localized to the nucleus and acts as a transcriptional repressor.","AT3G17810","PYD1",2108.2,-0.54402,0.071157,-7.6454,2.08E-14,{"v":4.55e-13,"d":"4.55E-13"},"full_name=pyrimidine 1. pyrimidine 1. Encodes a protein predicted to have dihydropyrimidine dehydrogenase activity. Its activity has not been demonstrated in vivo, but, it is required for efficient uracil catabolism in Arabidopsis. It localizes to the plastid."]
["AT5G59990",null,28.234,4.8291,0.68046,7.0968,1.28E-12,{"v":3.15e-11,"d":"3.15E-11"},"CCT motif family protein.","AT4G06746","RAP2.9",147,1.8235,0.23872,7.6386,{"v":2.2e-14,"d":"2.20E-14"},{"v":5.24e-13,"d":"5.24E-13"},"full_name=related to AP2 9. related to AP2 9. encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.9). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1 and RAP2.10.","AT2G04030","CR88",1564.7,1.0087,0.12124,8.32,{"v":8.8E-17,"d":"8.80E-17"},2.04E-15,"Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response and crucial for protein import into the chloroplast stroma. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR.","AT4G29020",null,864.64,-1.0129,0.10084,-10.045,{"v":9.66e-24,"d":"9.66E-24"},{"v":2.16e-22,"d":"2.16E-22"},"glycine-rich protein.","AT4G28610","PHR1",495.89,0.82426,0.10797,7.6343,2.27E-14,{"v":4.95e-13,"d":"4.95E-13"},"full_name=phosphate starvation response 1. phosphate starvation response 1. Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in shoots."]
["AT2G42840","PDF1",8503.6,0.68763,0.096937,7.0935,{"v":1.31e-12,"d":"1.31E-12"},{"v":3.22e-11,"d":"3.22E-11"},"full_name=protodermal factor 1. protodermal factor 1. Encodes a putative extracellular proline-rich protein is exclusively expressed in the L1 layer of vegetative, inflorescence and floral meristems and the protoderm of organ primordia.","AT3G11420",null,100.96,1.6836,0.22048,7.636,{"v":2.24e-14,"d":"2.24E-14"},{"v":5.34e-13,"d":"5.34E-13"},"beta-1,3-N-acetylglucosaminyltransferase lunatic protein, putative (DUF604).","AT3G26480",null,147.15,1.5786,0.18983,8.3158,{"v":9.11e-17,"d":"9.11E-17"},2.11E-15,"Transducin family protein / WD-40 repeat family protein.","AT5G53970","TAT7",624.95,-1.4058,0.13998,-10.043,{"v":9.87e-24,"d":"9.87E-24"},{"v":2.21e-22,"d":"2.21E-22"},"full_name=tyrosine aminotransferase 7. Tyrosine transaminase family protein. encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment","AT5G50920","CLPC1",8379.5,-0.45591,0.059729,-7.633,{"v":2.29e-14,"d":"2.29E-14"},{"v":5e-13,"d":"5.00E-13"},"full_name=CLPC homologue 1. CLPC homologue 1. Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery. Association of Hsp93 with the inner envelope membrane through its N domain is important for the functions of Hsp93 in vivo."]
["AT5G03940","CPSRP54",143.35,-1.3317,0.18793,-7.0859,1.38E-12,{"v":3.39e-11,"d":"3.39E-11"},"full_name=chloroplast signal recognition particle 54 kDa subunit. chloroplast signal recognition particle 54 kDa subunit. mutant has Yellow first leaves; Chloroplast Signal Recognition Particle Subunit","AT4G25450","ABCB28",491.01,0.90731,0.11894,7.6283,2.38E-14,{"v":5.66e-13,"d":"5.66E-13"},"full_name=ATP-binding cassette B28. non-intrinsic ABC protein 8. member of NAP subfamily","AT5G22470","ADP-RIBOSE",22058,1.2544,0.15093,8.3109,{"v":9.5e-17,"d":"9.50E-17"},{"v":2.19e-15,"d":"2.19E-15"},"poly ADP-ribose polymerase 3.","AT5G15260",null,453.27,-1.5946,0.15879,-10.042,{"v":9.93e-24,"d":"9.93E-24"},{"v":2.22e-22,"d":"2.22E-22"},"ribosomal protein L34e superfamily protein.","AT1G70590",null,560.72,0.76351,0.10014,7.6244,2.45E-14,{"v":5.33e-13,"d":"5.33E-13"},"F-box family protein."]
["AT3G04380","SUVR4",323.52,-1.0676,0.15072,-7.0831,{"v":1.41e-12,"d":"1.41E-12"},{"v":3.46e-11,"d":"3.46E-11"},"SET-domain containing protein lysine methyltransferase family protein. Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.","AT3G52910","GRF4",61.08,-2.2725,0.29791,-7.6281,2.38E-14,{"v":5.66e-13,"d":"5.66E-13"},"full_name=growth-regulating factor 4. growth-regulating factor 4. Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.","AT3G54320","WRI1",335.06,-1.8482,0.22251,-8.3059,{"v":9.91e-17,"d":"9.91E-17"},2.28E-15,"full_name=WRINKLED 1. Integrase-type DNA-binding superfamily protein. WRINKLED1 encodes transcription factor of the AP2/ERWEBP class. Protein has two plant-specific (AP2/EREB) DNA-binding domains and is involved in the control of storage compound biosynthesis in Arabidopsis. Mutants have wrinkled seed phenotype, due to a defect in the incorporation of sucrose and glucose into triacylglycerols. Transgenic sGsL plants (21-day-old) grown on 6% sucrose for 24 hours had 2-fold increase in levels of expressions (sGsL line carries a single copy of T-DNA containing the Spomin::GUS-Spomin::LUC dual reporter genes in the upper arm of chromosome 5 of ecotype Col-0. The sporamin .minimal. promoter directs sugar-inducible expression of the LUC and GUS reporters in leaves). Regulation by LEC2 promotes fatty acid accumulation during seed maturation.","AT3G53460","CP29",778.19,1.7011,0.16953,10.034,1.08E-23,{"v":2.4E-22,"d":"2.40E-22"},"full_name=chloroplast RNA-binding protein 29. chloroplast RNA-binding protein 29. Encodes a nuclear gene with a consensus RNA-binding domain that is localized to the chloroplast.","AT5G52530",null,1176.6,0.58751,0.077057,7.6243,2.45E-14,{"v":5.33e-13,"d":"5.33E-13"},"dentin sialophosphoprotein-like protein."]
["AT5G16250",null,30.773,-3.7967,0.53613,-7.0817,1.42E-12,{"v":3.49e-11,"d":"3.49E-11"},"transmembrane protein.","AT2G22670","IAA8",1515.1,-0.77099,0.10113,-7.624,{"v":2.46e-14,"d":"2.46E-14"},{"v":5.84e-13,"d":"5.84E-13"},"full_name=indoleacetic acid-induced protein 8. indoleacetic acid-induced protein 8. Encodes a transcriptional repressor of the auxin response that is auxin inducible and is involved in lateral root formation.","AT1G62080","TBA3",44425,-2.9846,0.35939,-8.3046,{"v":1e-16,"d":"1.00E-16"},{"v":2.3e-15,"d":"2.30E-15"},"transmembrane protein.","AT1G58360","AAP1",1116,-0.96632,0.096378,-10.026,1.17E-23,{"v":2.6E-22,"d":"2.60E-22"},"full_name=amino acid permease 1. amino acid permease 1. Encodes AAP1 (amino acid permease 1), a neutral amino acid transporter expressed in seeds. Functions in amino acid uptake into embryos. The transporter also functions in acquisition of glutamate and neutral amino acids by the root.","AT4G04020","FIB",615.88,-0.79914,0.10483,-7.6235,{"v":2.47e-14,"d":"2.47E-14"},{"v":5.36e-13,"d":"5.36E-13"},"full_name=fibrillin. fibrillin. Fibrillin precursor protein. The fibrillin preprotein, but not the mature protein interacts with ABI2. Regulated by abscisic acid response regulators. Involved in abscisic acid-mediated photoprotection."]
["AT1G09200","H3.1",40.471,-2.8892,0.40823,-7.0774,1.47E-12,{"v":3.6e-11,"d":"3.60E-11"},"Histone superfamily protein.","AT2G05300",null,162.77,-1.4472,0.18984,-7.6233,{"v":2.47e-14,"d":"2.47E-14"},{"v":5.86e-13,"d":"5.86E-13"},"pseudogene. pseudogene of the F-box protein family","AT2G03810",null,228.05,1.3987,0.16848,8.3015,1.03E-16,{"v":2.36e-15,"d":"2.36E-15"},"18S pre-ribosomal assembly protein gar2-like protein.","AT1G11330","RDA2",70.865,-3.864,0.38562,-10.02,1.24E-23,{"v":2.76e-22,"d":"2.76E-22"},"S-locus lectin protein kinase family protein.","AT3G23580","RNR2A",644.97,0.71156,0.093448,7.6145,{"v":2.65e-14,"d":"2.65E-14"},{"v":5.73e-13,"d":"5.73E-13"},"full_name=ribonucleotide reductase 2A. ribonucleotide reductase 2A. Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes (RNR2A). Functionally redundant with the ribonucleotide reductase TSO2. mRNA was shown to specifically accumulate during the S-phase of the cell cycle in synchronized tobacco BY2 cells. Critical for cell cycle progression, DNA damage repair and plant development."]
["AT1G19180","JAZ1",743.95,0.76624,0.10833,7.0734,1.51E-12,{"v":3.7e-11,"d":"3.70E-11"},"full_name=jasmonate-zim-domain protein 1. jasmonate-zim-domain protein 1. JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.","AT5G66310",null,311.47,-1.1116,0.14584,-7.6217,{"v":2.5e-14,"d":"2.50E-14"},5.93E-13,"ATP binding microtubule motor family protein.","AT5G52190",null,105.2,2.1872,0.26347,8.3014,1.03E-16,{"v":2.36e-15,"d":"2.36E-15"},"Sugar isomerase (SIS) family protein.","AT1G07530","SCL14",1026.4,1.0768,0.10775,9.9933,1.63E-23,{"v":3.62e-22,"d":"3.62E-22"},"full_name=SCARECROW-like 14. SCARECROW-like 14. Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.","AT3G03530","NPC4",47.336,-3.8726,0.50924,-7.6047,{"v":2.86e-14,"d":"2.86E-14"},{"v":6.18e-13,"d":"6.18E-13"},"full_name=non-specific phospholipase C4. non-specific phospholipase C4. PHOSPHOESTERASE FAMILY PROTEIN, NPC4 is significantly induced upon phosphate starvation and plays an important role in the supply of inorganic phosphate and diacylglycerol from membrane-phospholipids during phosphate deprivation."]
["AT4G34230","CAD5",304.09,-1.0088,0.14264,-7.0724,1.52E-12,{"v":3.72e-11,"d":"3.72E-11"},"full_name=cinnamyl alcohol dehydrogenase 5. cinnamyl alcohol dehydrogenase 5. Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use sinapyl, caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates.","AT1G50020",null,191.84,1.2907,0.16936,7.6212,{"v":2.51e-14,"d":"2.51E-14"},{"v":5.94e-13,"d":"5.94E-13"},"tubulin alpha-6 chain.","AT1G60710","ATB2",363.77,-1.2611,0.15194,-8.3001,1.04E-16,2.38E-15,"NAD(P)-linked oxidoreductase superfamily protein. Encodes ATB2.","AT4G01970","STS",1054.3,-1.2961,0.1298,-9.9847,{"v":1.78e-23,"d":"1.78E-23"},{"v":3.94e-22,"d":"3.94E-22"},"full_name=stachyose synthase. stachyose synthase. Encodes a putative stachyose synthetase or raffinose synthase.","AT3G13277",null,233.68,-1.1168,0.14703,-7.5956,{"v":3.06e-14,"d":"3.06E-14"},{"v":6.62e-13,"d":"6.62E-13"},"other_RNA."]
["AT5G52300","LTI65",313.53,1.6316,0.23072,7.0717,{"v":1.53e-12,"d":"1.53E-12"},{"v":3.73e-11,"d":"3.73E-11"},"full_name=LOW-TEMPERATURE-INDUCED 65. CAP160 protein. encodes a protein that is induced in expression in response to water deprivation such as cold, high-salt, and dessication. The response appears to be via abscisic acid. The promoter region contains two ABA-responsive elements (ABREs) that are required for the dehydration-responsive expression of rd29B as cis-acting elements. Protein is a member of a gene family with other members found plants, animals and fungi.","AT3G29385",null,87.887,-1.8446,0.24213,-7.6183,2.57E-14,{"v":6.07e-13,"d":"6.07E-13"},"dentin sialophosphoprotein-like protein.","AT3G59660","BAGP1",262.07,-1.2337,0.14873,-8.2953,1.08E-16,{"v":2.48e-15,"d":"2.48E-15"},"C2 domain-containing protein / GRAM domain-containing protein.","AT3G63540",null,131.91,2.0725,0.20767,9.9796,{"v":1.87e-23,"d":"1.87E-23"},{"v":4.14e-22,"d":"4.14E-22"},"thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein). Conceptual translation of this open reading frame gave the sequence of a 229-residue hypothetical protein that contains the same sequence as the mature A. thaliana chloroplast luminal 19-kDa protein linked to a putative signal sequence.","AT5G04200","MC9",31.552,-4.1647,0.54982,-7.5747,{"v":3.6e-14,"d":"3.60E-14"},{"v":7.76e-13,"d":"7.76E-13"},"full_name=metacaspase 9. metacaspase 9. Encodes a putative metacaspase. Arabidopsis contains three type I MCP genes (MCP1a-c) and six type II MCP genes (MCP2a%E2%80%93f): AtMCP1a/At5g64240, AtMCP1b/At1g02170, AtMCP1c/At4g25110, AtMCP2a/At1g79310, AtMCP2b/At1g79330, AtMCP2c/At1g79320, AtMCP2d/At1g79340, AtMCP2e/At1g16420, AtMCP2f/At5g04200."]
["AT3G58060","MTP8",200.73,1.2899,0.18249,7.0684,1.57E-12,{"v":3.82e-11,"d":"3.82E-11"},"Cation efflux family protein.","AT1G50900","GDC1",60.926,-2.259,0.29665,-7.6151,2.64E-14,{"v":6.22e-13,"d":"6.22E-13"},"full_name=Grana Deficient Chloroplast 1. Ankyrin repeat family protein. Encodes GDC1 (Grana Deficient Chloroplast 1), an ankyrin domain containing protein required fro chloroplast thylakoid grana formation.","AT2G35860","FLA16",359.46,-1.6949,0.20432,-8.295,1.09E-16,{"v":2.48e-15,"d":"2.48E-15"},"full_name=FASCICLIN-like arabinogalactan protein 16 precursor. FASCICLIN-like arabinogalactan protein 16 precursor.","AT5G50790","SWEET10",884.86,-4.9788,0.49981,-9.9615,{"v":2.25e-23,"d":"2.25E-23"},{"v":4.97e-22,"d":"4.97E-22"},"Nodulin MtN3 family protein. Encodes a member of the SWEET sucrose efflux transporter family proteins.","AT3G50740","UGT72E1",1060.2,-0.6316,0.083396,-7.5735,{"v":3.63e-14,"d":"3.63E-14"},7.82E-13,"full_name=UDP-glucosyl transferase 72E1. UDP-glucosyl transferase 72E1. UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism."]
["AT5G08030","GDPD6",31.505,-5.1525,0.72917,-7.0662,{"v":1.59e-12,"d":"1.59E-12"},{"v":3.87e-11,"d":"3.87E-11"},"full_name=glycerophosphodiester phosphodiesterase 6. PLC-like phosphodiesterases superfamily protein. Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family.","AT3G06868",null,97.619,-2.0307,0.26673,-7.6132,{"v":2.67e-14,"d":"2.67E-14"},{"v":6.3e-13,"d":"6.30E-13"},"vitellogenin-like protein.","AT1G28400",null,370.69,-1.6109,0.19425,-8.293,{"v":1.1E-16,"d":"1.10E-16"},{"v":2.52e-15,"d":"2.52E-15"},"GATA zinc finger protein.","AT5G49900",null,102.54,-4.6941,0.47182,-9.9489,{"v":2.55e-23,"d":"2.55E-23"},{"v":5.63e-22,"d":"5.63E-22"},"Beta-glucosidase, GBA2 type family protein.","AT4G25990","CIL",181.97,1.5401,0.20336,7.5734,{"v":3.64e-14,"d":"3.64E-14"},7.82E-13,"CCT motif family protein. chloroplast import apparatus CIA2-like. CIA2 is a transcription factor which upregulates chloroplast translocon genes"]
["AT1G56190","CPGK2",715.43,-0.97011,0.13731,-7.0653,{"v":1.6E-12,"d":"1.60E-12"},{"v":3.89e-11,"d":"3.89E-11"},"Phosphoglycerate kinase family protein.","AT1G22170",null,408.76,-1.135,0.14923,-7.6058,2.83E-14,{"v":6.66e-13,"d":"6.66E-13"},"Phosphoglycerate mutase family protein.","AT1G70780",null,2425.2,1.01,0.12196,8.2816,{"v":1.22e-16,"d":"1.22E-16"},2.77E-15,"hypothetical protein.","AT4G15530","PPDK",2996.1,-0.98089,0.098621,-9.9461,{"v":2.62e-23,"d":"2.62E-23"},5.78E-22,"full_name=pyruvate orthophosphate dikinase. pyruvate orthophosphate dikinase. The product of this long transcript was shown to be targeted to the chloroplast, whereas the shorter transcript (no targeting sequence) accumulates in the cytosol. They were also found in slightly different tissues.","AT3G17410","CARK1",369.84,0.94135,0.12434,7.5706,{"v":3.72e-14,"d":"3.72E-14"},{"v":7.98e-13,"d":"7.98E-13"},"Protein kinase superfamily protein."]
["AT4G17790",null,2876.3,-0.59943,0.084849,-7.0647,1.61E-12,{"v":3.9e-11,"d":"3.90E-11"},"SNARE associated Golgi protein family.","AT2G34790","MEE23",811.08,0.86708,0.11408,7.6005,{"v":2.95e-14,"d":"2.95E-14"},{"v":6.93e-13,"d":"6.93E-13"},"full_name=MATERNAL EFFECT EMBRYO ARREST 23. FAD-binding Berberine family protein.","AT5G20045",null,131.33,-2.0865,0.25196,-8.2811,{"v":1.22e-16,"d":"1.22E-16"},{"v":2.78e-15,"d":"2.78E-15"},"transmembrane protein.","AT5G50100","DCC1",378.19,-1.5147,0.15247,-9.9346,{"v":2.94e-23,"d":"2.94E-23"},{"v":6.48e-22,"d":"6.48E-22"},"Putative thiol-disulfide oxidoreductase DCC.","AT2G46520","XPO2",516.85,0.77549,0.10248,7.5672,{"v":3.81e-14,"d":"3.81E-14"},{"v":8.18e-13,"d":"8.18E-13"},"cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter."]
["AT1G78070",null,130.03,1.6238,0.22985,7.0646,1.61E-12,{"v":3.9e-11,"d":"3.90E-11"},"Transducin/WD40 repeat-like superfamily protein.","AT2G25890",null,2048.9,0.9281,0.12227,7.5906,{"v":3.19e-14,"d":"3.19E-14"},{"v":7.47e-13,"d":"7.47E-13"},"Oleosin family protein.","AT1G20560","AAE1",146.6,-1.8012,0.21777,-8.2712,{"v":1.33e-16,"d":"1.33E-16"},{"v":3.02e-15,"d":"3.02E-15"},"full_name=acyl activating enzyme 1. acyl activating enzyme 1.","AT4G09760","CEK3",127.54,-2.3475,0.23645,-9.9281,{"v":3.14e-23,"d":"3.14E-23"},{"v":6.9e-22,"d":"6.90E-22"},"Protein kinase superfamily protein. encodes a choline synthase whose gene expression is induced by high salt and mannitol.","AT1G22500","ATL15",176.28,1.3822,0.18285,7.559,{"v":4.06e-14,"d":"4.06E-14"},{"v":8.71e-13,"d":"8.71E-13"},"full_name=Arabidopsis toxicos en levadura 15. RING/U-box superfamily protein. Gene encodes a putative C3HC4-type RING zinc finger factor. it is induced in response to light and ascorbate stimulus."]
["AT4G20360","RABE1b",989.9,-0.72867,0.1032,-7.0609,1.65E-12,{"v":4e-11,"d":"4.00E-11"},"full_name=RAB GTPase homolog E1B. RAB GTPase homolog E1B.","AT1G18650","PDCB3",48.255,-2.6038,0.34306,-7.5899,{"v":3.2e-14,"d":"3.20E-14"},{"v":7.5e-13,"d":"7.50E-13"},"full_name=plasmodesmata callose-binding protein 3. plasmodesmata callose-binding protein 3. Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.","AT5G42020","BIP2",1119.1,-0.91537,0.11082,-8.2602,{"v":1.45e-16,"d":"1.45E-16"},{"v":3.3E-15,"d":"3.30E-15"},"Heat shock protein 70 (Hsp 70) family protein. Luminal binding protein (BiP2) involved in polar nuclei fusion during proliferation of endosperm nuclei.","AT4G23493",null,130.93,7.4606,0.75157,9.9268,{"v":3.18e-23,"d":"3.18E-23"},{"v":6.99e-22,"d":"6.99E-22"},"hypothetical protein.","AT5G13420","TRA2",1496.9,0.63215,0.083666,7.5556,{"v":4.17e-14,"d":"4.17E-14"},{"v":8.92e-13,"d":"8.92E-13"},"full_name=transaldolase 2. Aldolase-type TIM barrel family protein."]
["AT4G27250",null,690.13,0.851,0.12056,7.0586,{"v":1.68e-12,"d":"1.68E-12"},{"v":4.06e-11,"d":"4.06E-11"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT4G33140",null,579.78,-0.88223,0.11625,-7.589,{"v":3.22e-14,"d":"3.22E-14"},{"v":7.54e-13,"d":"7.54E-13"},"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein.","AT5G03190","CPUORF47",160.41,-1.5391,0.18649,-8.2527,1.55E-16,{"v":3.51e-15,"d":"3.51E-15"},"full_name=conserved peptide upstream open reading frame 47. peptide upstream protein. Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF47 represents a conserved upstream opening reading frame relative to major ORF AT5G03190.1","AT1G26920",null,77.989,-3.3958,0.34211,-9.9261,{"v":3.21e-23,"d":"3.21E-23"},{"v":7.03e-22,"d":"7.03E-22"},"zinc finger CCHC domain protein.","AT1G63940","MDAR6",265.03,1.1448,0.15152,7.555,{"v":4.19e-14,"d":"4.19E-14"},{"v":8.95e-13,"d":"8.95E-13"},"full_name=monodehydroascorbate reductase 6. monodehydroascorbate reductase 6."]
["AT1G01090","PDH-E1 ALPHA",4218,-0.71676,0.10162,-7.0532,1.75E-12,4.22E-11,"full_name=pyruvate dehydrogenase E1 alpha. pyruvate dehydrogenase E1 alpha. pyruvate dehydrogenase E1 alpha subunit","AT1G19180","JAZ1",1144.3,0.72257,0.095457,7.5696,{"v":3.75e-14,"d":"3.75E-14"},{"v":8.75e-13,"d":"8.75E-13"},"full_name=jasmonate-zim-domain protein 1. jasmonate-zim-domain protein 1. JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.","AT1G66200","GSR2",542.3,-1.3585,0.16468,-8.2492,1.59E-16,{"v":3.61e-15,"d":"3.61E-15"},"full_name=glutamine synthase clone F11. hypothetical protein. encodes a cytosolic glutamate synthetase, this enzyme has low affinity with substrate ammonium","AT3G25820","TPS-CIN",291.07,-11.794,1.1888,-9.9214,{"v":3.36e-23,"d":"3.36E-23"},{"v":7.36e-22,"d":"7.36E-22"},"full_name=terpene synthase-like sequence-1,8-cineole. terpene synthase-like sequence-1,8-cineole. Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830.","AT2G36460","FBA6",3410.1,-0.52127,0.069007,-7.5539,{"v":4.22e-14,"d":"4.22E-14"},9.01E-13,"full_name=fructose-bisphosphate aldolase 6. Aldolase superfamily protein."]
["AT3G51120",null,1253.5,0.89746,0.12729,7.0507,{"v":1.78e-12,"d":"1.78E-12"},{"v":4.29e-11,"d":"4.29E-11"},"zinc finger CCCH domain-containing protein 44.","AT5G07510","GRP14",61.122,2.5045,0.33104,7.5655,{"v":3.86e-14,"d":"3.86E-14"},{"v":9.02e-13,"d":"9.02E-13"},"full_name=glycine-rich protein 14. glycine-rich protein 14. encodes a glycine-rich protein that is expressed in low abundance in stems and leaves, and very low abundance in flowers.","AT1G77120","ADH1",5400.6,1.0252,0.12429,8.2485,{"v":1.6e-16,"d":"1.60E-16"},{"v":3.63e-15,"d":"3.63E-15"},"full_name=alcohol dehydrogenase 1. alcohol dehydrogenase 1. Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.","AT4G02940","ALKBH10B",350.3,-1.3023,0.13146,-9.9066,{"v":3.9E-23,"d":"3.90E-23"},{"v":8.52e-22,"d":"8.52E-22"},"oxidoreductase, 2OG-Fe(II) oxygenase family protein.","AT1G70670","CLO4",48.887,-3.9165,0.51854,-7.5528,{"v":4.26e-14,"d":"4.26E-14"},{"v":9.08e-13,"d":"9.08E-13"},"full_name=caleosin 4. Caleosin-related family protein. The gene encodes a stress-responsive and OB-associated non-seed caleosin-like protein. It plays a negative regulator role in ABA signaling."]
["AT4G36530",null,597.76,0.8194,0.11623,7.0498,1.79E-12,{"v":4.31e-11,"d":"4.31E-11"},"alpha/beta-Hydrolases superfamily protein.","AT2G36220",null,304.57,1.19,0.1573,7.5649,{"v":3.88e-14,"d":"3.88E-14"},{"v":9.04e-13,"d":"9.04E-13"},"hypothetical protein.","AT5G25100","TMN9",346.22,-1.1898,0.14425,-8.2483,1.61E-16,{"v":3.63e-15,"d":"3.63E-15"},"Endomembrane protein 70 protein family.","AT3G14690","CYP72A15",226.36,1.6687,0.1685,9.9029,4.04E-23,{"v":8.83e-22,"d":"8.83E-22"},"full_name=cytochrome P450, family 72, subfamily A, polypeptide 15. cytochrome P450, family 72, subfamily A, polypeptide 15. putative cytochrome P450","AT2G14170","ALDH6B2",565.45,-0.7547,0.099934,-7.552,{"v":4.29e-14,"d":"4.29E-14"},{"v":9.12e-13,"d":"9.12E-13"},"full_name=aldehyde dehydrogenase 6B2. aldehyde dehydrogenase 6B2. Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase"]
["AT5G55590","QRT1",32.272,-3.2277,0.45808,-7.0462,{"v":1.84e-12,"d":"1.84E-12"},4.42E-11,"full_name=QUARTET 1. Pectin lyase-like superfamily protein. Encodes a protein with pectin methylesterase activity. No change in activity were detected in mutants defective in this gene, which was interpreted as a result of redundancy of product function with other pectin methylesterases. The gene product is required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.","AT3G05880","RCI2A",416.22,1.1164,0.14758,7.5647,{"v":3.89e-14,"d":"3.89E-14"},{"v":9.05e-13,"d":"9.05E-13"},"full_name=RARE-COLD-INDUCIBLE 2A. Low temperature and salt responsive protein family. Induced by low temperatures, dehydration and salt stress and ABA. Encodes a small (54 amino acids), highly hydrophobic protein that bears two potential transmembrane domains.","AT5G54960","PDC2",1913.5,1.1552,0.14008,8.2466,{"v":1.63e-16,"d":"1.63E-16"},{"v":3.68e-15,"d":"3.68E-15"},"full_name=pyruvate decarboxylase-2. pyruvate decarboxylase-2. pyruvate decarboxylase-2","AT5G25900","GA3",1341,0.99773,0.10079,9.899,{"v":4.2e-23,"d":"4.20E-23"},{"v":9.17e-22,"d":"9.17E-22"},"full_name=GA requiring 3. GA requiring 3. Encodes a member of the CYP701A cytochrome p450 family that is involved in later steps of the gibberellin biosynthetic pathway.","AT4G18425","DMP4",35.439,-4.1931,0.55534,-7.5505,{"v":4.34e-14,"d":"4.34E-14"},{"v":9.22e-13,"d":"9.22E-13"},"transmembrane protein, putative (DUF679)."]
["AT3G51895","SULTR3;1",587.73,0.84494,0.11995,7.0442,{"v":1.87e-12,"d":"1.87E-12"},{"v":4.47e-11,"d":"4.47E-11"},"full_name=sulfate transporter 3;1. sulfate transporter 3;1. Encodes a chloroplast-localized sulfate transporter.","AT1G72280","ERO1",217.65,-1.2007,0.15876,-7.5629,{"v":3.94e-14,"d":"3.94E-14"},{"v":9.16e-13,"d":"9.16E-13"},"full_name=endoplasmic reticulum oxidoreductins 1. endoplasmic reticulum oxidoreductins 1. endoplasmic reticulum oxidoreductin","AT3G05640","EGR1",118.11,2.0941,0.25395,8.2461,1.64E-16,{"v":3.69e-15,"d":"3.69E-15"},"Protein phosphatase 2C family protein.","AT2G15890","MEE14",534.16,1.798,0.18168,9.8967,{"v":4.3E-23,"d":"4.30E-23"},{"v":9.37e-22,"d":"9.37E-22"},"full_name=maternal effect embryo arrest 14. maternal effect embryo arrest 14.","AT4G30490",null,106.86,-1.6872,0.22348,-7.5496,{"v":4.36e-14,"d":"4.36E-14"},{"v":9.26e-13,"d":"9.26E-13"},"AFG1-like ATPase family protein."]
["AT2G44230",null,134.92,-1.5428,0.21904,-7.0435,{"v":1.87e-12,"d":"1.87E-12"},{"v":4.49e-11,"d":"4.49E-11"},"hypothetical protein (DUF946).","AT1G55320","AAE18",174.51,-1.3424,0.17752,-7.5616,{"v":3.98e-14,"d":"3.98E-14"},{"v":9.24e-13,"d":"9.24E-13"},"full_name=acyl-activating enzyme 18. acyl-activating enzyme 18. Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins.","AT3G55440","TPI",644.01,-1.0967,0.13318,-8.2346,{"v":1.8e-16,"d":"1.80E-16"},{"v":4.05e-15,"d":"4.05E-15"},"full_name=triosephosphate isomerase. triosephosphate isomerase. Encodes triosephosphate isomerase.","AT1G67070","DIN9",99.137,-2.4338,0.24619,-9.886,{"v":4.79e-23,"d":"4.79E-23"},1.04E-21,"full_name=DARK INDUCIBLE 9. Mannose-6-phosphate isomerase, type I. Encodes a protein with phosphomannose isomerase activity that is involved in synthesis of ascorbic acid. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.","AT2G21490","LEA",39287,-0.43687,0.057867,-7.5496,{"v":4.37e-14,"d":"4.37E-14"},{"v":9.26e-13,"d":"9.26E-13"},"full_name=dehydrin LEA. dehydrin LEA."]
["AT5G04000",null,103.32,1.6006,0.22751,7.0353,{"v":1.99e-12,"d":"1.99E-12"},{"v":4.76e-11,"d":"4.76E-11"},"hypothetical protein.","AT5G52640","HSP90.1",552.61,1.1734,0.1554,7.5509,{"v":4.32e-14,"d":"4.32E-14"},{"v":1e-12,"d":"1.00E-12"},"full_name=heat shock protein 90.1. heat shock-like protein. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance.","AT5G11650","MAGL13",295.6,-1.632,0.19831,-8.2295,1.88E-16,{"v":4.22e-15,"d":"4.22E-15"},"alpha/beta-Hydrolases superfamily protein.","AT5G13010","EMB3011",1173.1,0.97795,0.098956,9.8827,4.95E-23,1.07E-21,"full_name=embryo defective 3011. RNA helicase family protein.","AT1G01960","EDA10",850.69,0.68755,0.091095,7.5476,{"v":4.44e-14,"d":"4.44E-14"},{"v":9.39e-13,"d":"9.39E-13"},"full_name=embryo sac development arrest 10. SEC7-like guanine nucleotide exchange family protein."]
["AT5G04885","BGLC3",656.94,0.83159,0.1183,7.0295,{"v":2.07e-12,"d":"2.07E-12"},{"v":4.95e-11,"d":"4.95E-11"},"Glycosyl hydrolase family protein.","AT5G67070","RALFL34",90.085,-1.8087,0.24004,-7.5351,{"v":4.88e-14,"d":"4.88E-14"},1.13E-12,"full_name=ralf-like 34. ralf-like 34. Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.","AT3G56050",null,738.03,-0.98962,0.12031,-8.2255,1.94E-16,{"v":4.36e-15,"d":"4.36E-15"},"Protein kinase family protein.","AT2G01850","EXGT-A3",148.03,-1.9218,0.19447,-9.8819,{"v":4.99e-23,"d":"4.99E-23"},{"v":1.08e-21,"d":"1.08E-21"},"full_name=endoxyloglucan transferase A3. endoxyloglucan transferase A3. EXGT-A3 has homology to xyloglucan endotransglucosylases/hydrolases (XTHs). Mutants in this gene show a lesion mimic phenotype associated with leaf maturation and a reduction in the number of tertiary veins. Individual tracheary elements in the mutants are shorter, but phloem transport activity is not severely affected. EXGT-A3 plays a role in xyloglucan degradation in the differentiating tracheary elements of rosette leaves.","AT1G59870","PEN3",148.56,2.1179,0.28068,7.5454,{"v":4.51e-14,"d":"4.51E-14"},{"v":9.53e-13,"d":"9.53E-13"},"full_name=PENETRATION 3. ABC-2 and Plant PDR ABC-type transporter family protein. ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acid%E2%80%93dependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance."]
["AT5G59150","RABA2D",108.27,-1.551,0.2208,-7.0243,{"v":2.15e-12,"d":"2.15E-12"},5.13E-11,"full_name=RAB GTPase homolog A2D. RAB GTPase homolog A2D.","AT1G79920","Hsp70-15",1025,0.77736,0.10335,7.5217,{"v":5.41e-14,"d":"5.41E-14"},{"v":1.25e-12,"d":"1.25E-12"},"full_name=heat shock protein 70-15. Heat shock protein 70 (Hsp 70) family protein.","AT1G72040","dNK",1381.4,0.87937,0.10693,8.2236,1.97E-16,{"v":4.43e-15,"d":"4.43E-15"},"full_name=deoxyribonucleoside kinase. P-loop containing nucleoside triphosphate hydrolases superfamily protein. Encodes a multisubstrate deoxyribonucleoside kinase that salvages DNA precursors.","AT5G46250","LARP6a",938.72,0.92992,0.094253,9.8663,{"v":5.83e-23,"d":"5.83E-23"},1.26E-21,"full_name=La related protein 6a. RNA-binding protein.","AT1G77000","SKP2B",1034.9,0.77993,0.1034,7.5429,{"v":4.6E-14,"d":"4.60E-14"},9.71E-13,"RNI-like superfamily protein. AtSKP2;2 is a homolog of human SKP2, the human F-box protein that recruits E2F1. Contains an F-box motif at the N-terminal region and a C-terminal Leu-rich repeat domain. Forms part of an E3-ubiquitin-ligase SCF (Skp1, cullin, F-box) complex and recruits phosphorylated AtE2Fc, a transcriptional factor that might play a role in cell division and during the transition from skotomorphogenesis to photomorphogenesis. AtSKP2;1 (At1g21410) and AtSKP2;2 (At1g77000) may be duplicated genes. AtSKP2b may also be involved in the degradation of KRP1/ICK1, a CDK inhibitor."]
["AT2G25060","ENODL14",29.562,-4.3294,0.617,-7.0169,{"v":2.27e-12,"d":"2.27E-12"},{"v":5.4e-11,"d":"5.40E-11"},"full_name=early nodulin-like protein 14. early nodulin-like protein 14.","AT5G35750","HK2",58.723,-2.3867,0.31756,-7.5159,{"v":5.65e-14,"d":"5.65E-14"},{"v":1.3e-12,"d":"1.30E-12"},"full_name=histidine kinase 2. histidine kinase 2. Encodes histidine kinase AHK2.","AT5G42100","BG_PPAP",434.72,-1.5966,0.19434,-8.2154,2.11E-16,{"v":4.73e-15,"d":"4.73E-15"},"full_name=beta-1,3-glucanase_putative. beta-1,3-glucanase. encodes a plasmodesmal (Pd)-associated membrane protein involved in plasmodesmal callose degradation, i.e. beta-1,3-glucanase (EC 3.2.1.39), and functions in the gating of Pd","AT3G29200","CM1",233.17,-1.5447,0.1566,-9.864,{"v":5.96e-23,"d":"5.96E-23"},1.29E-21,"full_name=chorismate mutase 1. chorismate mutase 1. L-ascorbate peroxidase","AT2G19270",null,341.3,0.94148,0.12485,7.5408,{"v":4.67e-14,"d":"4.67E-14"},{"v":9.85e-13,"d":"9.85E-13"},"mitotic checkpoint protein PRCC-carboxy-term protein."]
["AT1G35720","ANNAT1",112.95,1.6206,0.23128,7.0073,{"v":2.43e-12,"d":"2.43E-12"},{"v":5.78e-11,"d":"5.78E-11"},"full_name=annexin 1. annexin 1. Encodes a member of the annexin gene family, a diverse, multigene family of calcium-dependent, membrane-binding proteins. The protein was determined to have peroxidase activity. This activity is thought to be dependent on the presence of post-translational modifications (most likely phosphorylation). The protein was shown to be present as a mixture of monomer and homodimer. The homodimerization seems to be dependent on the presence of Ca2+ or H2O2. The dimerization was prevented by the addition of DTT, &#946;-mercaptoethanol and TCEP. Annat1 mRNA is expressed in flowers, roots,leaves and stems and is most abundant in stems. mRNA levels are increased in response to oxidative stress. Developmental expression patterns suggest a role in Golgi-mediated polysaccharide secretion. It is a Ca 2+-permeable transporter providing a molecular link between reactive oxygen species and cytosolic Ca 2+ in plants.","AT2G29190","PUM2",305.94,1.047,0.1393,7.5158,5.66E-14,{"v":1.3e-12,"d":"1.30E-12"},"full_name=pumilio 2. pumilio 2. Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.","AT2G42790","CSY3",3064,0.8924,0.10878,8.2038,{"v":2.33e-16,"d":"2.33E-16"},{"v":5.2e-15,"d":"5.20E-15"},"full_name=citrate synthase 3. citrate synthase 3. Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development.","AT2G30040","MAPKKK14",81.998,-2.8546,0.28986,-9.8481,{"v":6.99e-23,"d":"6.99E-23"},1.51E-21,"full_name=mitogen-activated protein kinase kinase kinase 14. mitogen-activated protein kinase kinase kinase 14. member of MEKK subfamily","AT1G71695",null,182.93,-1.3087,0.17355,-7.5406,4.68E-14,{"v":9.85e-13,"d":"9.85E-13"},"Peroxidase superfamily protein."]
["AT1G56580","SVB",3756.2,-0.89225,0.12739,-7.0039,{"v":2.49e-12,"d":"2.49E-12"},5.92E-11,"full_name=SMALLER WITH VARIABLE BRANCHES. plant/protein (Protein of unknown function, DUF538). Encodes SMALLER WITH VARIABLE BRANCHES (SVB), a protein with a conserved domain of unknown function (DUF538). The trichomes of the SVB mutants are smaller and exhibit branches of variable length and number.","AT4G18130","PHYE",770.3,0.8995,0.11985,7.505,{"v":6.14e-14,"d":"6.14E-14"},{"v":1.41e-12,"d":"1.41E-12"},"full_name=phytochrome E. phytochrome E. member of Histidine Kinase","AT3G51240","F3H",589.83,-1.2201,0.14891,-8.1935,{"v":2.54e-16,"d":"2.54E-16"},{"v":5.66e-15,"d":"5.66E-15"},"full_name=flavanone 3-hydroxylase. flavanone 3-hydroxylase. Encodes flavanone 3-hydroxylase that is coordinately expressed with chalcone synthase and chalcone isomerases. Regulates flavonoid biosynthesis. Not responsive to auxin or ethylene stimulus (qRT-PCR).","AT3G25830","TPS-CIN",269.63,-11.684,1.1887,-9.8291,{"v":8.44e-23,"d":"8.44E-23"},{"v":1.82e-21,"d":"1.82E-21"},"full_name=terpene synthase-like sequence-1,8-cineole. terpene synthase-like sequence-1,8-cineole. Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830.","AT5G06839","TGA10",649.24,0.72225,0.095892,7.5319,{"v":5e-14,"d":"5.00E-14"},1.05E-12,"full_name=TGACG (TGA) motif-binding protein 10. bZIP transcription factor family protein."]
["AT5G54020",null,51.82,-2.2503,0.32148,-6.9998,2.56E-12,{"v":6.08e-11,"d":"6.08E-11"},"Cysteine/Histidine-rich C1 domain family protein.","AT1G27030",null,31.971,4.2517,0.56658,7.5042,{"v":6.18e-14,"d":"6.18E-14"},1.42E-12,"hypothetical protein.","AT1G78040",null,1396.6,-1.0236,0.12498,-8.1901,2.61E-16,{"v":5.82e-15,"d":"5.82E-15"},"Pollen Ole e 1 allergen and extensin family protein.","AT4G27250",null,165.32,-1.9373,0.19728,-9.8199,{"v":9.24e-23,"d":"9.24E-23"},{"v":1.99e-21,"d":"1.99E-21"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT5G58020","RTF2",491.9,0.82287,0.1093,7.5287,{"v":5.12e-14,"d":"5.12E-14"},1.08E-12,"RTF2 RING-finger protein."]
["AT2G47940","DEG2",294.32,-1.0705,0.15304,-6.9945,2.66E-12,{"v":6.31e-11,"d":"6.31E-11"},"full_name=degradation of periplasmic proteins 2. DEGP protease 2. Encodes DegP2 protease (DEGP2); nuclear gene for chloroplast product.","AT2G25080","GPX1",265.09,1.2785,0.17043,7.5021,{"v":6.28e-14,"d":"6.28E-14"},{"v":1.44e-12,"d":"1.44E-12"},"full_name=glutathione peroxidase 1. glutathione peroxidase 1. Encodes glutathione peroxidase.","AT2G20890","PSB29",822.18,-0.96616,0.11798,-8.1894,{"v":2.62e-16,"d":"2.62E-16"},{"v":5.84e-15,"d":"5.84E-15"},"full_name=photosystem II reaction center PSB29 protein. photosystem II reaction center PSB29 protein. Chloroplast-localized Thylakoid formation1 gene product involved in vesicle-mediated formation of thylakoid membranes. Thf1 antisense lines contain abnormal chloroplasts early in leaf development (chloroplasts have loosely stacked thylakoid membranes). Expression was induced in the light and decreased under dark conditions. G-alpha interaction partner that functions downstream of the plasma membrane%E2%80%93delimited heterotrimeric G-protein (GPA1) in a D-glucose signaling pathway. Localized to both the outer plastid membrane and the stroma. Probably involved in the metabolic pathway that controls the assembly of the PS II complex.","AT4G26370",null,120.51,2.1027,0.21418,9.8175,{"v":9.46e-23,"d":"9.46E-23"},{"v":2.04e-21,"d":"2.04E-21"},"antitermination NusB domain-containing protein.","AT2G27380","EPR1",248290,-0.57231,0.07611,-7.5196,{"v":5.49e-14,"d":"5.49E-14"},{"v":1.15e-12,"d":"1.15E-12"},"full_name=extensin proline-rich 1. extensin proline-rich 1. Encodes an extensin like gene involved in seed germination."]
["AT5G57790","AOG1",879.35,0.90884,0.12999,6.9917,{"v":2.72e-12,"d":"2.72E-12"},6.43E-11,"hypothetical protein. Encodes a nuclear localized protein of unknown function that is involved in pollen and embryo sac development.","AT5G65860",null,47.351,9.0681,1.2088,7.502,{"v":6.29e-14,"d":"6.29E-14"},{"v":1.44e-12,"d":"1.44E-12"},"ankyrin repeat family protein.","AT4G24150","GRF8",291.86,1.16,0.14168,8.1871,2.67E-16,5.95E-15,"full_name=growth-regulating factor 8. growth-regulating factor 8. Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower.","AT1G53450",null,148.21,1.9549,0.1992,9.8138,{"v":9.82e-23,"d":"9.82E-23"},2.11E-21,"epstein-barr nuclear antigen.","AT3G52220",null,512.63,0.87562,0.11645,7.5193,5.51E-14,{"v":1.15e-12,"d":"1.15E-12"},"leukocyte immunoglobulin-like receptor family A protein."]
["AT5G04200","MC9",364.83,1.1105,0.15885,6.9909,{"v":2.73e-12,"d":"2.73E-12"},{"v":6.46e-11,"d":"6.46E-11"},"full_name=metacaspase 9. metacaspase 9. Encodes a putative metacaspase. Arabidopsis contains three type I MCP genes (MCP1a-c) and six type II MCP genes (MCP2a%E2%80%93f): AtMCP1a/At5g64240, AtMCP1b/At1g02170, AtMCP1c/At4g25110, AtMCP2a/At1g79310, AtMCP2b/At1g79330, AtMCP2c/At1g79320, AtMCP2d/At1g79340, AtMCP2e/At1g16420, AtMCP2f/At5g04200.","AT3G06420","ATG8H",401.94,1.0168,0.13557,7.5001,{"v":6.38e-14,"d":"6.38E-14"},1.46E-12,"full_name=autophagy 8h. Ubiquitin-like superfamily protein.","AT4G39980","DHS1",505.3,-1.0843,0.13247,-8.1858,{"v":2.7E-16,"d":"2.70E-16"},{"v":6e-15,"d":"6.00E-15"},"full_name=3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1. 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 1. Encodes a 2-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, which catalyzes the first committed step in aromatic amino acid biosynthesis. Gene expression is induced by wounding and pathogenic bacteria Pseudomonas syringae.","AT5G61780","Tudor2",366.29,-1.386,0.14134,-9.8059,{"v":1.06e-22,"d":"1.06E-22"},{"v":2.28e-21,"d":"2.28E-21"},"full_name=TUDOR-SN protein 2. TUDOR-SN protein 2. Involved in the regulation of AtGA20ox3 expression, as well as seed germination.","AT4G36210",null,3499.9,-0.52613,0.069992,-7.517,{"v":5.61e-14,"d":"5.61E-14"},{"v":1.17e-12,"d":"1.17E-12"},"transmembrane/coiled-coil protein (DUF726)."]
["AT5G23530","CXE18",354.99,-0.93829,0.13425,-6.9891,{"v":2.77e-12,"d":"2.77E-12"},{"v":6.53e-11,"d":"6.53E-11"},"full_name=carboxyesterase 18. carboxyesterase 18.","AT5G37180","SUS5",60.95,2.6789,0.35743,7.4948,6.64E-14,1.52E-12,"full_name=sucrose synthase 5. sucrose synthase 5. Encodes a protein with sucrose synthase activity (SUS5).","AT3G11050","FER2",10764,0.94884,0.11597,8.1819,2.79E-16,{"v":6.2e-15,"d":"6.20E-15"},"full_name=ferritin 2. ferritin 2.","AT2G01450","MPK17",1716.8,0.87404,0.089253,9.7928,{"v":1.21e-22,"d":"1.21E-22"},{"v":2.59e-21,"d":"2.59E-21"},"full_name=MAP kinase 17. MAP kinase 17. member of MAP Kinase","AT4G22100","BGLU3",599.9,-1.05,0.13982,-7.5098,{"v":5.92e-14,"d":"5.92E-14"},1.24E-12,"full_name=beta glucosidase 2. beta glucosidase 2."]
["AT3G05625",null,29.112,-3.7113,0.5315,-6.9827,2.89E-12,{"v":6.83e-11,"d":"6.83E-11"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT5G61790","CNX1",1965.6,-0.8034,0.10721,-7.4936,{"v":6.7e-14,"d":"6.70E-14"},{"v":1.53e-12,"d":"1.53E-12"},"full_name=calnexin 1. calnexin 1.","AT4G18020","APRR2",409.85,-1.3967,0.1709,-8.1728,{"v":3.01e-16,"d":"3.01E-16"},{"v":6.67e-15,"d":"6.67E-15"},"CheY-like two-component responsive regulator family protein. Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9).","AT4G14145",null,239.47,1.6429,0.16786,9.7878,1.27E-22,{"v":2.72e-21,"d":"2.72E-21"},"cytochrome C oxidase assembly protein.","AT4G12040","SAP7",824.96,0.95172,0.1268,7.5056,6.11E-14,1.28E-12,"full_name=stress-associated protein 7. A20/AN1-like zinc finger family protein."]
["AT5G10160",null,582.68,-0.83761,0.12,-6.9801,{"v":2.95e-12,"d":"2.95E-12"},{"v":6.95e-11,"d":"6.95E-11"},"Thioesterase superfamily protein.","AT4G37050","PLP4",1094.7,0.85623,0.11427,7.4931,{"v":6.73e-14,"d":"6.73E-14"},{"v":1.53e-12,"d":"1.53E-12"},"full_name=PATATIN-like protein 4. PATATIN-like protein 4. Patatin-related phospholipase A. Expressed in the floral gynaecium and is induced by abscisic acid (ABA) or phosphate deficiency in roots.","AT2G32010","CVL1",88.883,-2.1332,0.26129,-8.1642,{"v":3.23e-16,"d":"3.23E-16"},{"v":7.15e-15,"d":"7.15E-15"},"full_name=CVP2 like 1. CVP2 like 1. Encodes an inositol polyphosphate 5%E2%80%99-phosphatase (5PTase). Mediating phosphoinositide signaling. Involved in establishment of foliar vein patterns.","AT5G47880","ERF1-1",1045.6,-0.80534,0.082323,-9.7827,{"v":1.34e-22,"d":"1.34E-22"},{"v":2.86e-21,"d":"2.86E-21"},"full_name=eukaryotic release factor 1-1. eukaryotic release factor 1-1. Encodes a eukaryotic release factor 1 homolog. Cosuppression of the gene's expression results affects cell elongation of the inflorescence stem, specifically the internodes, and radial cell division. Expression of the protein is primarily observed in the vascular system and in actively growing and elongating zones.","AT1G75440","UBC16",243.17,-1.1389,0.1518,-7.5028,{"v":6.25e-14,"d":"6.25E-14"},{"v":1.3e-12,"d":"1.30E-12"},"full_name=ubiquitin-conjugating enzyme 16. ubiquitin-conjugating enzyme 16."]
["AT3G44310","NIT1",1224.4,-0.76184,0.10926,-6.9724,3.12E-12,{"v":7.33e-11,"d":"7.33E-11"},"full_name=nitrilase 1. nitrilase 1. Mutants are resistant to indole-3-acetonitrile (IAN). NIT1 catalyzes the terminal activation step in indole-acetic acid biosynthesis. Predominantly expressed isoform of nitrilase isoenzyme family. Aggregation of NIT1 in cells directly abutting wound sites is one of the earliest events associated with wound and herbicide-induced cell death. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. It is also involved in the conversion of IAN to IAM (indole-3-acetamide) and other non-auxin-related metabolic processes.","AT5G51560",null,34.69,-5.016,0.66968,-7.4901,{"v":6.88e-14,"d":"6.88E-14"},1.57E-12,"Leucine-rich repeat protein kinase family protein.","AT2G26900","BASS2",132.22,-2.4344,0.29823,-8.1629,{"v":3.27e-16,"d":"3.27E-16"},{"v":7.23e-15,"d":"7.23E-15"},"full_name=bile acid:sodium symporter family protein 2. Sodium Bile acid symporter family.","AT2G42830","SHP2",73.296,-6.3373,0.64796,-9.7804,1.37E-22,{"v":2.92e-21,"d":"2.92E-21"},"full_name=SHATTERPROOF 2. K-box region and MADS-box transcription factor family protein. AGAMOUS [AG]-like MADS box protein (AGL5) involved in fruit development (valve margin and dehiscence zone differentiation). A putative direct target of AG. SHP2 has been shown to be a downstream gene of the complex formed by AG and SEP proteins (SEP4 alone does not form a functional complex with AG).","AT3G14920",null,439.87,-0.8619,0.11496,-7.4974,{"v":6.51e-14,"d":"6.51E-14"},{"v":1.35e-12,"d":"1.35E-12"},"Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein."]
["AT3G54560","HTA11",32.063,-3.2996,0.47371,-6.9653,{"v":3.28e-12,"d":"3.28E-12"},{"v":7.7e-11,"d":"7.70E-11"},"full_name=histone H2A 11. histone H2A 11. Encodes HTA11, a histone H2A protein. Loss of all H2A.Z (triple mutant with HTA8 and HTA9) results in a reduction in DNA methylation of transposons but not that of genes. Loss of H2A.Z causes misregulation of many genes involved in the response to developmental and environmental cues, and that these genes tend to have high levels of gene-body H2A.Z.","AT1G19720",null,75.605,-2.1137,0.2823,-7.4873,{"v":7.03e-14,"d":"7.03E-14"},{"v":1.6E-12,"d":"1.60E-12"},"Pentatricopeptide repeat (PPR-like) superfamily protein.","AT2G33520","ATHCYSTM7",1806.8,0.82314,0.10084,8.1626,3.28E-16,{"v":7.23e-15,"d":"7.23E-15"},"cysteine-rich/transmembrane domain protein A.","AT1G09570","PHYA",546.26,1.1644,0.11908,9.7786,1.39E-22,{"v":2.97e-21,"d":"2.97E-21"},"full_name=phytochrome A. phytochrome A. Light-labile cytoplasmic red/far-red light photoreceptor involved in the regulation of photomorphogenesis. It exists in two inter-convertible forms: Pr and Pfr (active) and functions as a dimer.The N terminus carries a single tetrapyrrole chromophore, and the C terminus is involved in dimerization. It is the sole photoreceptor mediating the FR high irradiance response (HIR). Major regulator in red-light induction of phototropic enhancement. Involved in the regulation of de-etiolation. Involved in gravitropism and phototropism. Requires FHY1 for nuclear accumulation.","AT2G41720","EMB2654",478.81,0.86328,0.11515,7.4972,{"v":6.52e-14,"d":"6.52E-14"},{"v":1.35e-12,"d":"1.35E-12"},"full_name=EMBRYO DEFECTIVE 2654. Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT1G31812","ACBP6",1882.5,-0.77084,0.11069,-6.9641,{"v":3.31e-12,"d":"3.31E-12"},{"v":7.76e-11,"d":"7.76E-11"},"full_name=acyl-CoA-binding protein 6. acyl-CoA-binding protein 6. Acyl-CoA-binding protein. Bind acyl-CoA esters and protect acyl-CoAs from degradation by microsomal acyl-hydrolases.","AT1G44000","SGRL",131.52,-1.4916,0.19945,-7.4788,{"v":7.5e-14,"d":"7.50E-14"},{"v":1.7E-12,"d":"1.70E-12"},"STAY-GREEN-like protein.","AT1G27120","GALT4",91.74,-2.6513,0.32501,-8.1577,{"v":3.41e-16,"d":"3.41E-16"},{"v":7.52e-15,"d":"7.52E-15"},"Galactosyltransferase family protein.","AT1G04778",null,64.352,-5.9214,0.60574,-9.7753,{"v":1.44e-22,"d":"1.44E-22"},{"v":3.06e-21,"d":"3.06E-21"},"hypothetical protein.","AT1G02380",null,341.16,0.94793,0.12646,7.4956,{"v":6.6e-14,"d":"6.60E-14"},1.37E-12,"transmembrane protein."]
["AT1G26820","RNS3",201.58,1.2919,0.18572,6.9562,{"v":3.5E-12,"d":"3.50E-12"},{"v":8.19e-11,"d":"8.19E-11"},"full_name=ribonuclease 3. ribonuclease 3. Encodes ribonuclease RNS3.","AT5G07350","Tudor1",2738.2,-0.64987,0.086898,-7.4786,{"v":7.51e-14,"d":"7.51E-14"},1.71E-12,"full_name=TUDOR-SN protein 1. TUDOR-SN protein 1. RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.","AT5G16810",null,183.43,-1.5177,0.18616,-8.1526,{"v":3.56e-16,"d":"3.56E-16"},{"v":7.84e-15,"d":"7.84E-15"},"Protein kinase superfamily protein.","AT5G41070","DRB5",179.8,-1.6737,0.17132,-9.7695,1.52E-22,{"v":3.24e-21,"d":"3.24E-21"},"full_name=dsRNA-binding protein 5. dsRNA-binding protein 5. Encodes a double-stranded RNA binding protein.","AT3G63260","ATMRK1",361.54,0.97957,0.13085,7.4862,{"v":7.09e-14,"d":"7.09E-14"},1.47E-12,"Protein kinase superfamily protein. protein kinase, similar to mammal mixed-lineage kinase and Raf protein kinase"]
["AT3G47190",null,200.56,-1.3545,0.19488,-6.9508,{"v":3.63e-12,"d":"3.63E-12"},{"v":8.5e-11,"d":"8.50E-11"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT3G56160",null,67.487,-2.3837,0.31881,-7.4768,{"v":7.61e-14,"d":"7.61E-14"},{"v":1.73e-12,"d":"1.73E-12"},"Sodium Bile acid symporter family.","AT5G62810","PEX14",833.19,0.92472,0.11344,8.1515,{"v":3.59e-16,"d":"3.59E-16"},{"v":7.9e-15,"d":"7.90E-15"},"full_name=peroxin 14. peroxin 14. mutant has a defect in the intracellular transport of thiolase from the cytosol to glyoxysomes (formerly known as ped2)","AT2G45190","AFO",113.05,-2.9684,0.30386,-9.7691,1.53E-22,{"v":3.25e-21,"d":"3.25E-21"},"full_name=ABNORMAL FLORAL ORGANS. Plant-specific transcription factor YABBY family protein. Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS).","AT3G25230","ROF1",1460.4,-0.62263,0.083228,-7.4811,{"v":7.37e-14,"d":"7.37E-14"},{"v":1.53e-12,"d":"1.53E-12"},"full_name=rotamase FKBP 1. rotamase FKBP 1. Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones."]
["AT4G25100","FSD1",1706.6,-0.82084,0.11813,-6.9488,{"v":3.68e-12,"d":"3.68E-12"},{"v":8.61e-11,"d":"8.61E-11"},"full_name=Fe superoxide dismutase 1. Fe superoxide dismutase 1. Fe-superoxide dismutase","AT3G23640","HGL1",1859,-0.64754,0.08663,-7.4748,{"v":7.73e-14,"d":"7.73E-14"},1.75E-12,"full_name=heteroglycan glucosidase 1. heteroglycan glucosidase 1.","AT1G10310",null,552.33,1.0584,0.12987,8.1494,{"v":3.66e-16,"d":"3.66E-16"},{"v":8.02e-15,"d":"8.02E-15"},"NAD(P)-binding Rossmann-fold superfamily protein. encodes a NADPH-dependent pterin aldehyde reductase that accepts pterin aldehyde as well as dihydropterin aldehyde as substrates involved in metabolism and salvage of folate and its derivatives.","AT4G32410","CESA1",396.31,-1.16,0.11876,-9.768,{"v":1.54e-22,"d":"1.54E-22"},3.28E-21,"full_name=cellulose synthase 1. cellulose synthase 1. Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.","AT1G09815","POLD4",343.54,-0.98796,0.13207,-7.4807,{"v":7.39e-14,"d":"7.39E-14"},{"v":1.53e-12,"d":"1.53E-12"},"full_name=polymerase delta 4. polymerase delta 4."]
["AT5G11090",null,704.47,1.0394,0.14961,6.9477,{"v":3.71e-12,"d":"3.71E-12"},{"v":8.66e-11,"d":"8.66E-11"},"serine-rich protein-like protein.","AT3G48440",null,178.36,-1.2987,0.17376,-7.474,{"v":7.78e-14,"d":"7.78E-14"},1.76E-12,"Zinc finger C-x8-C-x5-C-x3-H type family protein.","AT4G21320","HSA32",527.68,1.1059,0.13571,8.1486,{"v":3.68e-16,"d":"3.68E-16"},{"v":8.07e-15,"d":"8.07E-15"},"full_name=HEAT-STRESS-ASSOCIATED 32. Aldolase-type TIM barrel family protein. Encodes heat-stress-associated 32-kD protein. Up-regulated by heat shock. Thermotolerance in a knockout mutant was compromised following a long recovery period (> 24 h) after acclimation heat shock treatment.","AT5G58350","WNK4",207.47,1.7281,0.17695,9.766,{"v":1.58e-22,"d":"1.58E-22"},3.34E-21,"full_name=with no lysine (K) kinase 4. with no lysine (K) kinase 4. Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.","AT4G29190","OZF2",230.41,1.2353,0.16535,7.4711,{"v":7.95e-14,"d":"7.95E-14"},{"v":1.64e-12,"d":"1.64E-12"},"full_name=oxidation-related zinc finger 2. Zinc finger C-x8-C-x5-C-x3-H type family protein."]
["AT4G20050","QRT3",91.839,-1.5891,0.22896,-6.9405,{"v":3.91e-12,"d":"3.91E-12"},{"v":9.1e-11,"d":"9.10E-11"},"full_name=QUARTET 3. Pectin lyase-like superfamily protein. Encodes a polygalacturonase that plays a direct role in degrading the pollen mother cell wall during microspore development.","AT1G35720","ANNAT1",261.65,1.2192,0.16319,7.4711,{"v":7.95e-14,"d":"7.95E-14"},{"v":1.8E-12,"d":"1.80E-12"},"full_name=annexin 1. annexin 1. Encodes a member of the annexin gene family, a diverse, multigene family of calcium-dependent, membrane-binding proteins. The protein was determined to have peroxidase activity. This activity is thought to be dependent on the presence of post-translational modifications (most likely phosphorylation). The protein was shown to be present as a mixture of monomer and homodimer. The homodimerization seems to be dependent on the presence of Ca2+ or H2O2. The dimerization was prevented by the addition of DTT, &#946;-mercaptoethanol and TCEP. Annat1 mRNA is expressed in flowers, roots,leaves and stems and is most abundant in stems. mRNA levels are increased in response to oxidative stress. Developmental expression patterns suggest a role in Golgi-mediated polysaccharide secretion. It is a Ca 2+-permeable transporter providing a molecular link between reactive oxygen species and cytosolic Ca 2+ in plants.","AT4G37070","PLP1",66.881,2.3667,0.29047,8.1479,{"v":3.7E-16,"d":"3.70E-16"},{"v":8.11e-15,"d":"8.11E-15"},"Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein. Patatin-related phospholipase A. Expressed strongly and exclusively in roots. AtplaIVA-null mutants have reduced lateral root development. Phosphorylation by calcium-dependent protein kinases in vitro enhances its activity.","AT5G02020","SIS",587.99,1.28,0.13117,9.758,{"v":1.71e-22,"d":"1.71E-22"},{"v":3.61e-21,"d":"3.61E-21"},"full_name=Salt Induced Serine rich. E3 ubiquitin-protein ligase RLIM-like protein. Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).","AT2G24260","LRL1",927.31,0.71249,0.095374,7.4705,{"v":7.99e-14,"d":"7.99E-14"},1.65E-12,"full_name=LJRHL1-like 1. LJRHL1-like 1. Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1), At4g30980 (AtLRL2), and At5g58010 (AtLRL3)."]
["AT4G01580",null,168.95,-1.2152,0.17514,-6.9388,{"v":3.96e-12,"d":"3.96E-12"},{"v":9.21e-11,"d":"9.21E-11"},"AP2/B3-like transcriptional factor family protein.","AT2G04780","FLA7",94.363,-1.9109,0.25594,-7.4659,{"v":8.27e-14,"d":"8.27E-14"},{"v":1.86e-12,"d":"1.86E-12"},"full_name=FASCICLIN-like arabinoogalactan 7. FASCICLIN-like arabinoogalactan 7. fasciclin-like arabinogalactan-protein 7 (Fla7)","AT2G07050","CAS1",667.95,-0.9793,0.1203,-8.1403,{"v":3.94e-16,"d":"3.94E-16"},{"v":8.62e-15,"d":"8.62E-15"},"full_name=cycloartenol synthase 1. cycloartenol synthase 1. Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.","AT4G04830","MSRB5",215.18,-1.9124,0.19608,-9.7529,1.79E-22,{"v":3.79e-21,"d":"3.79E-21"},"full_name=methionine sulfoxide reductase B5. methionine sulfoxide reductase B5.","AT2G25340","VAMP712",550.13,-0.87162,0.11673,-7.467,{"v":8.2e-14,"d":"8.20E-14"},{"v":1.69e-12,"d":"1.69E-12"},"full_name=vesicle-associated membrane protein 712. vesicle-associated membrane protein 712. Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family."]
["AT3G51820","G4",154.72,-1.324,0.19102,-6.931,{"v":4.18e-12,"d":"4.18E-12"},{"v":9.71e-11,"d":"9.71E-11"},"UbiA prenyltransferase family protein. Encodes a protein with chlorophyll synthase activity. This enzyme has been shown to perform the esterification of chlorophyllide (a and b), the last step of chlorophyll biosynthesis. Although it can use either geranylgeranyl pyrophosphate (GGPP) or phytyl pyrophosphate (PhyPP) as substrates, the esterification reaction was faster with GGPP than with PhyPP.","AT4G36210",null,2228.3,0.62655,0.083977,7.4609,{"v":8.59e-14,"d":"8.59E-14"},{"v":1.93e-12,"d":"1.93E-12"},"transmembrane/coiled-coil protein (DUF726).","AT1G47530","DTX33",736.86,0.93131,0.11442,8.1393,{"v":3.98e-16,"d":"3.98E-16"},{"v":8.68e-15,"d":"8.68E-15"},"MATE efflux family protein.","AT2G28650","EXO70H8",106.49,-7.4807,0.76782,-9.7428,1.98E-22,{"v":4.18e-21,"d":"4.18E-21"},"full_name=exocyst subunit exo70 family protein H8. exocyst subunit exo70 family protein H8. A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.","AT5G61820",null,690.67,0.71281,0.095474,7.466,{"v":8.27e-14,"d":"8.27E-14"},{"v":1.7E-12,"d":"1.70E-12"},"stress up-regulated Nod 19 protein."]
["AT5G01600","FER1",299.92,-1.4374,0.2075,-6.9269,{"v":4.3e-12,"d":"4.30E-12"},{"v":9.98e-11,"d":"9.98E-11"},"full_name=ferretin 1. ferretin 1. Encodes a ferretin protein that is targeted to the chloroplast. Member of a Ferritin gene family. Gene expression is induced in response to iron overload and by nitric oxide. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.","AT3G53260","PAL2",442.3,-1.0621,0.14249,-7.4542,{"v":9.04e-14,"d":"9.04E-14"},2.03E-12,"full_name=phenylalanine ammonia-lyase 2. phenylalanine ammonia-lyase 2. Encodes phenylalanine lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).","AT1G67120","MDN1",596.79,1.1566,0.14221,8.133,4.19E-16,{"v":9.13e-15,"d":"9.13E-15"},"midasin-like protein. Represents a homolog of the yeast MDN gene, which encodes a non-ribosomal protein involved in the maturation and assembly of the 60S ribosomal subunit. In Arabidopsis, it is essential for female gametogenesis progression.","AT3G14560",null,58.348,-4.6563,0.47823,-9.7366,2.11E-22,{"v":4.44e-21,"d":"4.44E-21"},"hypothetical protein.","AT3G16770","EBP",5326.2,-0.55729,0.074652,-7.4651,{"v":8.32e-14,"d":"8.32E-14"},1.71E-12,"full_name=ethylene-responsive element binding protein. ethylene-responsive element binding protein. Encodes a member of the ERF (ethylene response factor) subfamily B-2 of the plant specific ERF/AP2 transcription factor family (RAP2.3). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.It is localized to the nucleus and acts as a transcriptional activator through the GCC-box. It has been identified as a suppressor of Bax-induced cell death by functional screening in yeast and can also suppress Bax-induced cell death in tobacco plants. Overexpression of this gene in tobacco BY-2 cells confers resistance to H2O2 and heat stresses. Overexpression in Arabidopsis causes upregulation of PDF1.2 and GST6. It is part of the ethylene signaling pathway and is predicted to act downstream of EIN2 and CTR1, but not under EIN3."]
["AT2G07180","PBL17",57.493,-2.1833,0.31532,-6.9241,{"v":4.39e-12,"d":"4.39E-12"},1.02E-10,"Protein kinase superfamily protein.","AT1G71695",null,4150.9,-0.78027,0.10475,-7.4489,{"v":9.41e-14,"d":"9.41E-14"},{"v":2.11e-12,"d":"2.11E-12"},"Peroxidase superfamily protein.","AT5G24580","HIPP09",269.49,-1.5674,0.19276,-8.1313,4.25E-16,9.25E-15,"Heavy metal transport/detoxification superfamily protein.","AT1G26560","BGLU40",51.945,-4.7007,0.48322,-9.7278,{"v":2.3e-22,"d":"2.30E-22"},{"v":4.83e-21,"d":"4.83E-21"},"full_name=beta glucosidase 40. beta glucosidase 40.","AT3G48530","KING1",1167.2,0.58925,0.079016,7.4573,8.83E-14,1.81E-12,"full_name=SNF1-related protein kinase regulatory subunit gamma 1. SNF1-related protein kinase regulatory subunit gamma 1."]
["AT2G03520","UPS4",26.806,3.7107,0.53625,6.9198,{"v":4.52e-12,"d":"4.52E-12"},1.05E-10,"full_name=ureide permease 4. ureide permease 4. Encodes AtUPS4, a member of the Arabidopsis ureide permease family.","AT4G22540","ORP2A",210.96,-1.3112,0.17611,-7.4455,9.66E-14,{"v":2.17e-12,"d":"2.17E-12"},"full_name=OSBP(oxysterol binding protein)-related protein 2A. OSBP(oxysterol binding protein)-related protein 2A.","AT2G16750",null,47.694,-3.7651,0.4632,-8.1284,{"v":4.35e-16,"d":"4.35E-16"},{"v":9.46e-15,"d":"9.46E-15"},"kinase with adenine nucleotide alpha hydrolases-like domain-containing protein.","AT1G15430",null,317.93,-1.4152,0.14551,-9.726,2.34E-22,4.91E-21,"hypothetical protein (DUF1644).","AT5G17850","CCX2",1031.8,0.802,0.10769,7.447,{"v":9.55e-14,"d":"9.55E-14"},{"v":1.96e-12,"d":"1.96E-12"},"Sodium/calcium exchanger family protein."]
["AT2G43510","TI1",29.682,3.8915,0.56242,6.9192,{"v":4.54e-12,"d":"4.54E-12"},1.05E-10,"full_name=trypsin inhibitor protein 1. trypsin inhibitor protein 1. Member of the defensin-like (DEFL) family. Encodes putative trypsin inhibitor protein which may function in defense against herbivory.","AT3G05970","LACS6",761.36,0.75517,0.10154,7.4369,1.03E-13,{"v":2.31e-12,"d":"2.31E-12"},"full_name=long-chain acyl-CoA synthetase 6. long-chain acyl-CoA synthetase 6. encode peroxisomal long-chain acyl-CoA synthetase (LACS) isozymes","AT2G40300","FER4",199.76,1.5308,0.18835,8.1275,{"v":4.38e-16,"d":"4.38E-16"},{"v":9.52e-15,"d":"9.52E-15"},"full_name=ferritin 4. ferritin 4. Encodes FERRITIN 4, AtFER4. Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life. Function as the main iron store in mammals. Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool. Localize to mitochondria. Knock out mutants are not sensitive to abiotic stress.","AT2G36307","ZPR4",99.008,-7.3779,0.75909,-9.7194,{"v":2.49e-22,"d":"2.49E-22"},5.23E-21,"other_RNA. Unknown gene","AT3G56150","EIF3C",1549.8,-0.66034,0.088692,-7.4454,{"v":9.67e-14,"d":"9.67E-14"},1.98E-12,"full_name=eukaryotic translation initiation factor 3C. eukaryotic translation initiation factor 3C. member of eIF3c - eukaryotic initiation factor 3c"]
["AT1G02205","CER1",30.957,8.4609,1.2229,6.9185,{"v":4.57e-12,"d":"4.57E-12"},1.05E-10,"full_name=ECERIFERUM 1. Fatty acid hydroxylase superfamily. Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.","AT4G17840","BCM4",2507.6,0.673,0.090533,7.4337,1.06E-13,2.36E-12,"CAAX protease self-immunity protein.","AT1G22170",null,141,-1.765,0.21727,-8.1235,{"v":4.53e-16,"d":"4.53E-16"},{"v":9.82e-15,"d":"9.82E-15"},"Phosphoglycerate mutase family protein.","AT2G39190","ATATH8",141.2,2.2187,0.22831,9.7183,{"v":2.52e-22,"d":"2.52E-22"},{"v":5.28e-21,"d":"5.28E-21"},"Protein kinase superfamily protein. member of ATH subfamily","AT1G04560",null,67406,-0.50298,0.067575,-7.4433,{"v":9.82e-14,"d":"9.82E-14"},{"v":2.01e-12,"d":"2.01E-12"},"AWPM-19-like family protein."]
["AT3G55330","PPL1",35.442,-2.9744,0.42999,-6.9174,{"v":4.6e-12,"d":"4.60E-12"},1.06E-10,"full_name=PsbP-like protein 1. PsbP-like protein 1.","AT4G02530","MPH2",82.216,-1.8467,0.24844,-7.4333,1.06E-13,{"v":2.37e-12,"d":"2.37E-12"},"chloroplast thylakoid lumen protein.","AT1G09530","PIF3",130.08,1.6602,0.20444,8.121,{"v":4.62e-16,"d":"4.62E-16"},{"v":1E-14,"d":"1.00E-14"},"full_name=phytochrome interacting factor 3. phytochrome interacting factor 3. Transcription factor interacting with photoreceptors phyA and phyB. Forms a ternary complex in vitro with G-box element of the promoters of LHY, CCA1. Acts as a negative regulator of phyB signalling. It degrades rapidly after irradiation of dark grown seedlings in a process controlled by phytochromes. Does not play a significant role in controlling light input and function of the circadian clockwork. Binds to G- and E-boxes, but not to other ACEs. Binds to anthocyanin biosynthetic genes in a light- and HY5-independent fashion. PIF3 function as a transcriptional activator can be functionally and mechanistically separated from its role in repression of PhyB mediated processes.","AT5G44410","ATBBE27",262.5,-1.5596,0.16054,-9.7147,{"v":2.61e-22,"d":"2.61E-22"},{"v":5.47e-21,"d":"5.47E-21"},"FAD-binding Berberine family protein.","AT4G32020",null,606.16,1.0179,0.1368,7.4403,{"v":1E-13,"d":"1.00E-13"},{"v":2.05e-12,"d":"2.05E-12"},"serine/arginine repetitive matrix-like protein."]
["AT3G30300",null,243.56,-1.121,0.16212,-6.9144,{"v":4.7e-12,"d":"4.70E-12"},1.08E-10,"O-fucosyltransferase family protein.","AT1G69420",null,232.92,-1.1633,0.15658,-7.4294,1.09E-13,{"v":2.43e-12,"d":"2.43E-12"},"DHHC-type zinc finger family protein.","AT1G48500","JAZ4",42.747,3.0675,0.37785,8.1183,{"v":4.73e-16,"d":"4.73E-16"},1.02E-14,"full_name=jasmonate-zim-domain protein 4. jasmonate-zim-domain protein 4.","AT3G02940","MYB107",59.41,-5.2888,0.54451,-9.7129,2.66E-22,{"v":5.56e-21,"d":"5.56E-21"},"full_name=myb domain protein 107. myb domain protein 107. Encodes a putative transcription factor (MYB107).","AT1G22770","GI",565.65,-0.73859,0.099307,-7.4375,1.03E-13,{"v":2.09e-12,"d":"2.09E-12"},"full_name=GIGANTEA. gigantea protein (GI). Together with CONSTANTS (CO) and FLOWERING LOCUS T (FT), GIGANTEA promotes flowering under long days in a circadian clock-controlled flowering pathway. GI acts earlier than CO and FT in the pathway by increasing CO and FT mRNA abundance. Located in the nucleus. Regulates several developmental processes, including photoperiod-mediated flowering, phytochrome B signaling, circadian clock, carbohydrate metabolism, and cold stress response. The gene's transcription is controlled by the circadian clock and it is post-transcriptionally regulated by light and dark. Forms a complex with FKF1 on the CO promoter to regulate CO expression."]
["AT1G68560","XYL1",59.185,-2.2252,0.3219,-6.9128,{"v":4.75e-12,"d":"4.75E-12"},1.09E-10,"full_name=alpha-xylosidase 1. alpha-xylosidase 1. Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.","AT1G77380","AAP3",238.16,1.3918,0.18767,7.416,{"v":1.21e-13,"d":"1.21E-13"},2.69E-12,"full_name=amino acid permease 3. amino acid permease 3. Amino acid permease which transports basic amino acids.","AT2G40150","TBL28",43.685,-3.5297,0.4348,-8.118,{"v":4.74e-16,"d":"4.74E-16"},1.02E-14,"full_name=TRICHOME BIREFRINGENCE-LIKE 28. TRICHOME BIREFRINGENCE-LIKE 28. Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT2G15010",null,12436,-0.61439,0.063276,-9.7096,{"v":2.74e-22,"d":"2.74E-22"},5.73E-21,"Plant thionin. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.","AT4G35750",null,760.75,0.73669,0.09906,7.4368,1.03E-13,{"v":2.1e-12,"d":"2.10E-12"},"SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein."]
["AT5G63240",null,76.248,-2.8546,0.41295,-6.9127,{"v":4.76e-12,"d":"4.76E-12"},1.09E-10,"Carbohydrate-binding X8 domain superfamily protein.","AT5G51760","AHG1",855.94,1.3836,0.18682,7.4063,{"v":1.3E-13,"d":"1.30E-13"},2.89E-12,"full_name=ABA-hypersensitive germination 1. Protein phosphatase 2C family protein. Encodes AHG1 (ABA-hypersensitive germination 1), a putative protein phosphatase 2C (PP2C). Expressed in seeds. AHG1 functions in seed development and germination.","AT3G54270",null,92.93,-2.2599,0.27859,-8.1116,{"v":4.99e-16,"d":"4.99E-16"},1.08E-14,"sucrose-6F-phosphate phosphohydrolase family protein.","AT3G17820","GLN1.3",1679.8,-0.94639,0.097545,-9.702,{"v":2.96e-22,"d":"2.96E-22"},6.17E-21,"full_name=glutamine synthetase 1.3. glutamine synthetase 1.3. encodes a cytosolic glutamine synthetase, the enzyme has low affinity with substrate ammonium","AT5G27520","PNC2",569.58,0.73666,0.099068,7.4359,1.04E-13,{"v":2.11e-12,"d":"2.11E-12"},"full_name=peroxisomal adenine nucleotide carrier 2. peroxisomal adenine nucleotide carrier 2. encodes a peroxisomal adenine nucleotide transporter, involved in fatty acid beta-oxidation during early stage of postgerminative growth."]
["AT3G14570","GSL04",262,1.0944,0.15844,6.9073,{"v":4.94e-12,"d":"4.94E-12"},1.13E-10,"full_name=glucan synthase-like 4. glucan synthase-like 4. encodes a protein similar to callose synthase","AT1G09500",null,1385.8,-0.67833,0.091609,-7.4046,{"v":1.32e-13,"d":"1.32E-13"},{"v":2.92e-12,"d":"2.92E-12"},"NAD(P)-binding Rossmann-fold superfamily protein. similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase","AT2G22010","RKP",793.43,1.4468,0.1785,8.1057,{"v":5.25e-16,"d":"5.25E-16"},1.13E-14,"full_name=related to KPC1. related to KPC1. Encodes a protein predicted to act as a RING E3 ubiquitin ligase. It appears to regulate the stability of the KRP1/ICK1 cyclin dependent kinase inhibitor. Induced by beet severe curly virus (BSCTV) C4 protein.","AT5G60540","PDX2",484.73,1.2714,0.13106,9.7008,{"v":2.99e-22,"d":"2.99E-22"},{"v":6.23e-21,"d":"6.23E-21"},"full_name=pyridoxine biosynthesis 2. pyridoxine biosynthesis 2. Encodes a protein predicted to function in tandem with PDX1 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis. PDX2 is predicted to function as glutaminase within the complex.","AT3G10550","MTM1",761.48,0.66729,0.089807,7.4302,{"v":1.08e-13,"d":"1.08E-13"},{"v":2.2e-12,"d":"2.20E-12"},"full_name=myotubularin 1. Myotubularin-like phosphatases II superfamily. Has 3'-phosphatase activity against both phosphatidylinositol-3,5-bisphosphate (PtdIns3,5P2) and Phosphatidylinositol-3-phosphate (PtdIns3P). The in vitro activity was higher with PtdIns3,5P2 than with PtdIns3P."]
["AT3G53470",null,65.726,-1.9015,0.27531,-6.9069,{"v":4.95e-12,"d":"4.95E-12"},{"v":1.14e-10,"d":"1.14E-10"},"2,3-bisphosphoglycerate-independent phosphoglycerate mutase.","AT5G65280","GCL1",242,1.1777,0.15928,7.3943,1.42E-13,{"v":3.16e-12,"d":"3.16E-12"},"full_name=GCR2-like 1. GCR2-like 1. Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor. Loss of function mutations in GCL1 show no ABA response defects based on assays of seed germination and seedling development.GCL1 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase.","AT2G40030","NRPD1B",154.65,-1.6134,0.19912,-8.1025,{"v":5.38e-16,"d":"5.38E-16"},{"v":1.16e-14,"d":"1.16E-14"},"full_name=nuclear RNA polymerase D1B. nuclear RNA polymerase D1B. Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing.","AT1G65670","CYP702A1",86.114,-4.0907,0.4217,-9.7007,{"v":2.99e-22,"d":"2.99E-22"},{"v":6.23e-21,"d":"6.23E-21"},"full_name=cytochrome P450, family 702, subfamily A, polypeptide 1. cytochrome P450, family 702, subfamily A, polypeptide 1. a member of the cytochrome P450 gene family. molecular function unknown.","AT5G24320",null,424.12,0.85981,0.11581,7.4246,1.13E-13,{"v":2.29e-12,"d":"2.29E-12"},"Transducin/WD40 repeat-like superfamily protein."]
["AT5G36700","PGLP1",32.607,-8.4127,1.2191,-6.901,{"v":5.16e-12,"d":"5.16E-12"},{"v":1.18e-10,"d":"1.18E-10"},"full_name=2-phosphoglycolate phosphatase 1. 2-phosphoglycolate phosphatase 1.","AT5G59320","LTP3",50.058,-2.5181,0.34081,-7.3886,1.48E-13,{"v":3.29e-12,"d":"3.29E-12"},"full_name=lipid transfer protein 3. lipid transfer protein 3. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.","AT5G08610","PDE340",88.17,2.0397,0.25177,8.1013,{"v":5.44e-16,"d":"5.44E-16"},1.17E-14,"full_name=PIGMENT DEFECTIVE 340. P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT3G62600","ATERDJ3B",135.1,-2.0713,0.2136,-9.6972,{"v":3.1e-22,"d":"3.10E-22"},{"v":6.44e-21,"d":"6.44E-21"},"DNAJ heat shock family protein. J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.","AT3G60250","CKB3",601.75,0.82948,0.1118,7.4192,1.18E-13,{"v":2.39e-12,"d":"2.39E-12"},"full_name=casein kinase II beta chain 3. casein kinase II beta chain 3. Regulatory (beta) subunit of the protein kinase CK2. Involved in regulation of the circadian clock in Arabidopsis"]
["AT1G48130","PER1",19179,0.57894,0.083921,6.8986,{"v":5.25e-12,"d":"5.25E-12"},{"v":1.2E-10,"d":"1.20E-10"},"full_name=1-cysteine peroxiredoxin 1. 1-cysteine peroxiredoxin 1. encodes a protein similar to the 1-cysteine (1-Cys) peroxiredoxin family of antioxidants. Expression is limited to seed (aleurone and embryo) and is not induced by ABA or drought.","AT1G21070","URGT2",79.062,-1.8991,0.25732,-7.3804,{"v":1.58e-13,"d":"1.58E-13"},{"v":3.5E-12,"d":"3.50E-12"},"Nucleotide-sugar transporter family protein.","AT5G09540",null,94.716,-1.9247,0.23764,-8.0992,{"v":5.53e-16,"d":"5.53E-16"},1.19E-14,"Chaperone DnaJ-domain superfamily protein.","AT5G21020",null,4934.1,1.695,0.17484,9.6949,{"v":3.17e-22,"d":"3.17E-22"},{"v":6.58e-21,"d":"6.58E-21"},"transmembrane protein.","AT2G01200","IAA32",53.238,6.5754,0.88634,7.4185,1.18E-13,{"v":2.4e-12,"d":"2.40E-12"},"full_name=indole-3-acetic acid inducible 32. indole-3-acetic acid inducible 32. Belongs to auxin inducible gene family."]
["AT3G13450","DIN4",187.17,-1.2047,0.17466,-6.8971,{"v":5.31e-12,"d":"5.31E-12"},1.21E-10,"full_name=DARK INDUCIBLE 4. Transketolase family protein. branched chain alpha-keto acid dehydrogenase E1 beta","AT3G52780","PAP20",492.21,0.99041,0.13422,7.3789,{"v":1.6E-13,"d":"1.60E-13"},{"v":3.53e-12,"d":"3.53E-12"},"Purple acid phosphatases superfamily protein.","AT4G20070","AAH",272.2,-1.2755,0.15815,-8.065,{"v":7.32e-16,"d":"7.32E-16"},{"v":1.57e-14,"d":"1.57E-14"},"full_name=allantoate amidohydrolase. allantoate amidohydrolase. The gene encoding Arabidopsis thaliana Allantoate Amidohydrolase (AtAAH)which catalyzes the allantoate deiminase reaction (EC 3.5.3.9)is expressed in all parts of the plant being consistent with a function in purine turnover in Arabidopsis.","AT4G09150",null,1173,1.3107,0.1355,9.6732,{"v":3.92e-22,"d":"3.92E-22"},{"v":8.12e-21,"d":"8.12E-21"},"T-complex protein 11.","AT2G44410",null,1204.9,0.6267,0.084507,7.4159,{"v":1.21e-13,"d":"1.21E-13"},{"v":2.44e-12,"d":"2.44E-12"},"RING/U-box superfamily protein."]
["AT1G33490",null,348.85,0.98697,0.14317,6.8937,{"v":5.44e-12,"d":"5.44E-12"},{"v":1.24e-10,"d":"1.24E-10"},"E3 ubiquitin-protein ligase.","AT5G45280","PAE11",127.19,1.4487,0.19653,7.3715,{"v":1.69e-13,"d":"1.69E-13"},{"v":3.72e-12,"d":"3.72E-12"},"Pectinacetylesterase family protein.","AT5G39570","PLDRP1",527.42,-0.95818,0.11882,-8.064,{"v":7.38e-16,"d":"7.38E-16"},1.58E-14,"transmembrane protein.","AT4G04760",null,52.136,-4.496,0.46501,-9.6685,{"v":4.1e-22,"d":"4.10E-22"},{"v":8.5e-21,"d":"8.50E-21"},"Major facilitator superfamily protein.","AT2G36580",null,338,0.96789,0.13069,7.4058,{"v":1.3E-13,"d":"1.30E-13"},{"v":2.63e-12,"d":"2.63E-12"},"Pyruvate kinase family protein."]
["AT1G64860","SIGA",163.69,-1.3606,0.19773,-6.8812,{"v":5.94e-12,"d":"5.94E-12"},1.35E-10,"full_name=sigma factor A. sigma factor A. Subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme","AT1G50260","NTMC2T5.1",342.78,1.0266,0.13927,7.3714,{"v":1.69e-13,"d":"1.69E-13"},{"v":3.72e-12,"d":"3.72E-12"},"full_name=N-terminal-transmembrane-C2 domain type 5.1. N-terminal-transmembrane-C2 domain type 5.1.","AT5G52540",null,90.545,-1.9758,0.24511,-8.0608,{"v":7.58e-16,"d":"7.58E-16"},1.62E-14,"keratin-associated protein, putative (DUF819).","AT3G05160",null,217.65,-1.5344,0.15903,-9.6489,{"v":4.97e-22,"d":"4.97E-22"},1.03E-20,"Major facilitator superfamily protein.","AT3G49300",null,154.76,-1.3639,0.18419,-7.405,1.31E-13,{"v":2.64e-12,"d":"2.64E-12"},"proline-rich family protein."]
["AT3G09035",null,97.62,-1.6013,0.23293,-6.8745,{"v":6.22e-12,"d":"6.22E-12"},1.41E-10,"Concanavalin A-like lectin family protein.","AT5G62940","HCA2",37.169,-3.2792,0.44511,-7.3673,{"v":1.74e-13,"d":"1.74E-13"},{"v":3.84e-12,"d":"3.84E-12"},"full_name=HIGH CAMBIAL ACTIVITY2. Dof-type zinc finger DNA-binding family protein. HCA2 induces the formation of interfascicular cambium and regulates vascular tissue development in the aerial parts of the plant. Evidence from both gain of function and dominant negative alleles.","AT2G38710",null,473.59,-1.284,0.15936,-8.0572,{"v":7.81e-16,"d":"7.81E-16"},{"v":1.67e-14,"d":"1.67E-14"},"AMMECR1 family.","AT3G04340","emb2458",380.54,1.2066,0.12511,9.644,{"v":5.21e-22,"d":"5.21E-22"},1.08E-20,"full_name=embryo defective 2458. FtsH extracellular protease family.","AT5G48160","OBE2",1514.6,0.54111,0.073226,7.3896,1.47E-13,{"v":2.96e-12,"d":"2.96E-12"},"full_name=OBERON2. potyvirus VPg interacting protein (DUF1423). Encodes a nuclear PHD finger protein that is functionally redundant with OBE1 and plays an important role in the maintenance and/or establishment of the root and shoot apical meristems."]
["AT2G33570","GALS1",206.76,1.1252,0.16379,6.8696,6.44E-12,{"v":1.46e-10,"d":"1.46E-10"},"full_name=galactan synthase 1. glycosyltransferase family protein (DUF23).","AT2G33830","DRM2",66.548,-2.5468,0.34571,-7.3668,{"v":1.75e-13,"d":"1.75E-13"},3.85E-12,"Dormancy/auxin associated family protein.","AT1G55190","PRA7",312.27,1.1748,0.14583,8.0562,{"v":7.87e-16,"d":"7.87E-16"},{"v":1.68e-14,"d":"1.68E-14"},"PRA1 (Prenylated rab acceptor) family protein.","AT5G43900","MYA2",392.49,-1.4435,0.14984,-9.6334,5.78E-22,{"v":1.19e-20,"d":"1.19E-20"},"full_name=myosin 2. myosin 2. Encodes a member of the type XI myosin protein family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. This protein is also involved in root hair growth and organelle trafficking. This protein interacts with RabC2a and RabD1 in a GTP-dependent manner.","AT2G27580","SAP3",265.62,-1.0374,0.14075,-7.3704,{"v":1.7e-13,"d":"1.70E-13"},3.42E-12,"A20/AN1-like zinc finger family protein."]
["AT1G17620",null,227.38,1.097,0.15991,6.86,{"v":6.89e-12,"d":"6.89E-12"},1.56E-10,"Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family.","AT4G03110","RBP-DR1",97.394,-1.7725,0.241,-7.3547,{"v":1.91e-13,"d":"1.91E-13"},4.21E-12,"full_name=RNA-binding protein-defense related 1. RNA-binding protein-defense related 1. Encodes a putative RNA-binding protein that is located in the cytoplasm and is involved in the hypersensitive response and positively regulates salicylic acid-mediated immunity.","AT3G17420","GPK1",193.23,-1.5119,0.18786,-8.0483,{"v":8.4e-16,"d":"8.40E-16"},{"v":1.79e-14,"d":"1.79E-14"},"full_name=glyoxysomal protein kinase 1. glyoxysomal protein kinase 1. serine/threonine protein kinase-like protein","AT3G56680",null,472.13,1.1155,0.11589,9.6251,{"v":6.26e-22,"d":"6.26E-22"},{"v":1.29e-20,"d":"1.29E-20"},"Single-stranded nucleic acid binding R3H protein.","AT5G59570","BOA",561.32,0.72914,0.098948,7.3689,1.72E-13,3.45E-12,"full_name=BROTHER OF LUX ARRHYTHMO. Homeodomain-like superfamily protein. Encodes BOA (BROTHER OF LUX ARRHYTHMO), a component of the circadian clock."]
["AT3G25810",null,26.771,3.7115,0.54153,6.8538,{"v":7.19e-12,"d":"7.19E-12"},{"v":1.63e-10,"d":"1.63E-10"},"Terpenoid cyclases/Protein prenyltransferases superfamily protein.","AT2G26070","RTE1",225.59,-1.1212,0.15249,-7.3527,{"v":1.94e-13,"d":"1.94E-13"},4.26E-12,"full_name=REVERSION-TO-ETHYLENE SENSITIVITY1. protein REVERSION-TO-ETHYLENE SENSITIVITY-like protein (DUF778). Encodes a predicted membrane protein. Similar sequences are widely distributed and conserved in plants, animals and protists but absent in fungi and prokaryotes. The sequence has no known motifs and no biological function has been assigned in any species. In Arabidopsis, it appears to be involved in the negative regulation of the response to ethylene, is localized to the Golgi and is a positive regulator of ETR1.","AT1G50110","BCAT6",100.72,-2.1807,0.27123,-8.04,8.98E-16,{"v":1.91e-14,"d":"1.91E-14"},"D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein.","AT2G27690","CYP94C1",79.841,-3.365,0.34978,-9.6202,{"v":6.57e-22,"d":"6.57E-22"},1.35E-20,"full_name=cytochrome P450, family 94, subfamily C, polypeptide 1. cytochrome P450, family 94, subfamily C, polypeptide 1. Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.","AT4G27670","HSP21",63.947,-2.785,0.37848,-7.3584,{"v":1.86e-13,"d":"1.86E-13"},{"v":3.73e-12,"d":"3.73E-12"},"full_name=heat shock protein 21. heat shock protein 21. Encodes Hsp21, a chloroplast located small heat shock protein. A structure model of Hsp21, obtained by homology modeling, single-particle electron microscopy, and lysine-specific chemical crosslinking, shows that the Hsp21 subunits are arranged in two hexameric discs, rotated by 25 degree in relation to each other."]
["AT3G27830","RPL12-A",219.89,-1.1845,0.17284,-6.8533,{"v":7.22e-12,"d":"7.22E-12"},{"v":1.63e-10,"d":"1.63E-10"},"full_name=ribosomal protein L12-A. ribosomal protein L12-A. 50S ribosomal protein L12-A","AT5G43990","SUVR2",68.694,-2.2883,0.31143,-7.3477,2.02E-13,{"v":4.42e-12,"d":"4.42E-12"},"SET-domain containing protein lysine methyltransferase family protein. Encodes SUVR2, one of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. Localized to the nucleolus, maybe involved in regulation of rRNA expression.","AT1G21670",null,120.32,1.6898,0.21029,8.0357,{"v":9.3e-16,"d":"9.30E-16"},{"v":1.98e-14,"d":"1.98E-14"},"DPP6 amino-terminal domain protein.","AT5G15650","RGP2",327.5,-1.3032,0.1355,-9.6173,6.76E-22,{"v":1.39e-20,"d":"1.39E-20"},"full_name=reversibly glycosylated polypeptide 2. reversibly glycosylated polypeptide 2. RGP2 is a UDP-arabinose mutase that catalyzes the interconversion between the pyranose and furanose forms of UDP-L-arabinose. It appears to be required for proper cell wall formation. rgp1(at3g02230)/rgp2 double mutants have a male gametophyte lethal phenotype. RGP2 fusion proteins can be found in the cytosol and peripherally associated with the Golgi apparatus. RGP2 was originally identified as Reversibly Glycosylated Polypeptide-2. Constitutive expression in tobacco impairs plant development and virus spread.","AT1G23870","TPS9",234.86,1.175,0.15972,7.3567,1.89E-13,{"v":3.78e-12,"d":"3.78E-12"},"full_name=trehalose-phosphatase/synthase 9. trehalose-phosphatase/synthase 9. Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain."]
["AT2G26910","ABCG32",506.08,-0.84215,0.1229,-6.8523,{"v":7.27e-12,"d":"7.27E-12"},1.64E-10,"full_name=ATP-binding cassette G32. pleiotropic drug resistance 4. Encodes a member of the PLEIOTROPIC DRUG RESISTANCE family of ATP binding cassette transporters. Required for the formation of a functional cuticle.","AT4G15530","PPDK",2168,0.69577,0.094806,7.339,{"v":2.15e-13,"d":"2.15E-13"},{"v":4.71e-12,"d":"4.71E-12"},"full_name=pyruvate orthophosphate dikinase. pyruvate orthophosphate dikinase. The product of this long transcript was shown to be targeted to the chloroplast, whereas the shorter transcript (no targeting sequence) accumulates in the cytosol. They were also found in slightly different tissues.","AT2G25800",null,154.2,-1.5824,0.19696,-8.0344,{"v":9.41e-16,"d":"9.41E-16"},{"v":2E-14,"d":"2.00E-14"},"elongation factor Ts (DUF810).","AT5G03640","AGC1-8",274.96,-1.577,0.164,-9.6154,6.88E-22,{"v":1.41e-20,"d":"1.41E-20"},"Protein kinase superfamily protein.","AT5G56970","CKX3",68.148,-2.1244,0.28881,-7.3559,{"v":1.9E-13,"d":"1.90E-13"},{"v":3.79e-12,"d":"3.79E-12"},"full_name=cytokinin oxidase 3. cytokinin oxidase 3. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins."]
["AT5G43760","KCS20",172.55,-1.188,0.17355,-6.8456,{"v":7.62e-12,"d":"7.62E-12"},1.72E-10,"full_name=3-ketoacyl-CoA synthase 20. 3-ketoacyl-CoA synthase 20. Encodes KCS20, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT3G24503","ALDH2C4",798.59,0.73697,0.10046,7.3361,{"v":2.2E-13,"d":"2.20E-13"},{"v":4.81e-12,"d":"4.81E-12"},"full_name=aldehyde dehydrogenase 2C4. aldehyde dehydrogenase 2C4. Arabidopsis thaliana aldehyde dehydrogenase AtALDH1a mRNA. a sinapaldehyde dehydrogenase catalyzes both the oxidation of coniferylaldehyde and sinapaldehyde forming ferulic acid and sinapic acid, respectively","AT5G24970",null,1026.9,1.2253,0.15253,8.033,{"v":9.51e-16,"d":"9.51E-16"},{"v":2.02e-14,"d":"2.02E-14"},"Protein kinase superfamily protein.","AT3G12800","SDRB",724.1,-0.92475,0.096189,-9.6139,{"v":6.99e-22,"d":"6.99E-22"},{"v":1.43e-20,"d":"1.43E-20"},"full_name=short-chain dehydrogenase-reductase B. short-chain dehydrogenase-reductase B.","AT3G57290","EIF3E",960.99,0.61461,0.083614,7.3506,{"v":1.97e-13,"d":"1.97E-13"},{"v":3.94e-12,"d":"3.94E-12"},"full_name=eukaryotic translation initiation factor 3E. eukaryotic translation initiation factor 3E. Encodes a protein that is found in not only the eif3 complex but also in association with subunits of the COP9 signalosome. eIF3e appears to be subjected to proteasome-dependent degradation that requires the PCI domain of eIF3e. The level of eIF3e present in cells appears to affect the rate of translation."]
["AT1G20030",null,58.637,-2.4146,0.35288,-6.8426,{"v":7.77e-12,"d":"7.77E-12"},{"v":1.75e-10,"d":"1.75E-10"},"Pathogenesis-related thaumatin superfamily protein.","AT2G29090","CYP707A2",99.116,2.0326,0.2772,7.3324,2.26E-13,{"v":4.94e-12,"d":"4.94E-12"},"full_name=cytochrome P450, family 707, subfamily A, polypeptide 2. cytochrome P450, family 707, subfamily A, polypeptide 2. Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. This gene predominantly accumulates in dry seeds and is up-regulated immediately following imbibition. CYP707A2 appears to play a major role in the rapid decrease in ABA levels during early seed imbibition.","AT1G68540","TKPR2",100.61,-2.1605,0.26902,-8.0309,{"v":9.68e-16,"d":"9.68E-16"},{"v":2.05e-14,"d":"2.05E-14"},"full_name=tetraketide alpha-pyrone reductase 2. NAD(P)-binding Rossmann-fold superfamily protein.","AT3G14630","CYP72A9",80.336,-6.7525,0.70298,-9.6056,{"v":7.57e-22,"d":"7.57E-22"},1.55E-20,"full_name=cytochrome P450, family 72, subfamily A, polypeptide 9. cytochrome P450, family 72, subfamily A, polypeptide 9. putative cytochrome P450","AT1G02660","PLIP2",377.04,-0.99164,0.13498,-7.3464,{"v":2.04e-13,"d":"2.04E-13"},{"v":4.06e-12,"d":"4.06E-12"},"alpha/beta-Hydrolases superfamily protein."]
["AT1G52155",null,81.997,-1.6542,0.24192,-6.8377,{"v":8.05e-12,"d":"8.05E-12"},1.81E-10,"transmembrane protein.","AT1G17200","CASPL2A1",112.79,-1.5498,0.21139,-7.3312,{"v":2.28e-13,"d":"2.28E-13"},{"v":4.98e-12,"d":"4.98E-12"},"Uncharacterized protein family (UPF0497).","AT5G49720","GH9A1",516.2,-1.3423,0.16719,-8.0288,{"v":9.84e-16,"d":"9.84E-16"},2.08E-14,"full_name=glycosyl hydrolase 9A1. glycosyl hydrolase 9A1. Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1.","AT1G04120","ABCC5",2601.9,-1.2492,0.13012,-9.6001,{"v":7.99e-22,"d":"7.99E-22"},{"v":1.63e-20,"d":"1.63E-20"},"full_name=ATP-binding cassette C5. multidrug resistance-associated protein 5. encodes a high-affinity inositol hexakisphosphate transporter that plays a role in guard cell signaling and phytate storage. It is a member of MRP subfamily / ABC transporter subfamily C.","AT1G07473",null,225.28,-1.1826,0.16108,-7.3417,{"v":2.11e-13,"d":"2.11E-13"},{"v":4.2e-12,"d":"4.20E-12"},"hypothetical protein."]
["AT2G42190",null,156,-1.4189,0.20756,-6.836,{"v":8.15e-12,"d":"8.15E-12"},{"v":1.83e-10,"d":"1.83E-10"},"rho GTPase-activating gacO-like protein.","AT3G20820",null,261.39,-1.2238,0.1673,-7.3149,{"v":2.58e-13,"d":"2.58E-13"},{"v":5.61e-12,"d":"5.61E-12"},"Leucine-rich repeat (LRR) family protein.","AT1G03770","RING1B",425.12,1.1271,0.14042,8.0264,{"v":1e-15,"d":"1.00E-15"},{"v":2.12e-14,"d":"2.12E-14"},"full_name=RING 1B. RING 1B. Encodes a nuclear localized protein with similarity to animal polycomb repressive core complex1 (PRC1) core component RING.Appears to function redundantly with ATRING1a, a close paralog. Both interact physically with CLF and LHP1 and appear to function together to repress class I KNOX gene expression.","AT3G22240","ATHCYSTM9",72.022,-3.9654,0.4131,-9.5991,{"v":8.06e-22,"d":"8.06E-22"},1.65E-20,"cysteine-rich/transmembrane domain PCC1-like protein.","AT1G69760",null,295.54,1.3327,0.18154,7.3415,{"v":2.11e-13,"d":"2.11E-13"},{"v":4.2e-12,"d":"4.20E-12"},"suppressor SRP40-like protein."]
["AT1G79230","MST1",1264.4,0.64801,0.09481,6.8348,8.21E-12,{"v":1.84e-10,"d":"1.84E-10"},"full_name=mercaptopyruvate sulfurtransferase 1. mercaptopyruvate sulfurtransferase 1. encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification.","AT5G56300","GAMT2",689.37,-0.91878,0.1257,-7.3095,{"v":2.68e-13,"d":"2.68E-13"},5.83E-12,"full_name=gibberellic acid methyltransferase 2. gibberellic acid methyltransferase 2. A member of the Arabidopsis SABATH methyltransferase gene family. Encodes GAMT2, a methyltransferase that uses S-adenosine-L-methionine (SAM) as a methyl donor to methylate the carboxyl group of GAs, resulting in the methyl esters of GAs (MeGAs). Expressed most highly in the siliques during seed development.","AT4G24620","PGI1",159.56,-1.7663,0.22023,-8.0201,{"v":1.06e-15,"d":"1.06E-15"},2.23E-14,"full_name=phosphoglucose isomerase 1. phosphoglucose isomerase 1. The PGI1 gene encodes the plastid phospho-glucose (Glc) isomerase. While pgi1-1 mutant has a deficiency in leaf starch synthesis, it accumulates starch in root cap cells. Flowering time of the pgi1-1 mutant is significantly delayed under short-day conditions.","AT2G23150","NRAMP3",58.994,-3.6265,0.37782,-9.5986,{"v":8.11e-22,"d":"8.11E-22"},1.65E-20,"full_name=natural resistance-associated macrophage protein 3. natural resistance-associated macrophage protein 3. Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp4, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination.","AT5G06460","UBA 2",1634,0.53835,0.073335,7.341,{"v":2.12e-13,"d":"2.12E-13"},4.21E-12,"full_name=ubiquitin activating enzyme 2. ubiquitin activating enzyme 2. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined."]
["AT1G52690","LEA7",1929.8,1.2991,0.1901,6.8338,{"v":8.27e-12,"d":"8.27E-12"},{"v":1.85e-10,"d":"1.85E-10"},"full_name=LATE EMBRYOGENESIS ABUNDANT 7. Late embryogenesis abundant protein (LEA) family protein.","AT2G22240","MIPS2",2684.5,0.86437,0.11829,7.3069,2.73E-13,{"v":5.94e-12,"d":"5.94E-12"},"full_name=myo-inositol-1-phosphate synthase 2. myo-inositol-1-phosphate synthase 2. ** Referred to as MIPS1 in Mitsuhashi et al 2008. Myo-inositol-1-phosphate synthase isoform 2. Expressed in leaf, root and silique. Immunolocalization experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.","AT5G16460","SEIPIN1",527.39,1.0162,0.12681,8.0135,{"v":1.12e-15,"d":"1.12E-15"},{"v":2.35e-14,"d":"2.35E-14"},"Putative adipose-regulatory protein (Seipin).","AT4G18210","PUP10",186.01,1.6745,0.17448,9.5973,{"v":8.21e-22,"d":"8.21E-22"},{"v":1.67e-20,"d":"1.67E-20"},"full_name=purine permease 10. purine permease 10. Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.","AT2G34340",null,52.302,2.6261,0.35794,7.3367,2.19E-13,{"v":4.35e-12,"d":"4.35E-12"},"senescence regulator (Protein of unknown function, DUF584)."]
["AT4G30200","VEL1",263.72,-1.1241,0.16453,-6.832,{"v":8.37e-12,"d":"8.37E-12"},1.88E-10,"full_name=vernalization5/VIN3-like 1. vernalization5/VIN3-like protein. Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.","AT5G52420","PRCE3",1246.7,0.84587,0.11577,7.3067,{"v":2.74e-13,"d":"2.74E-13"},{"v":5.94e-12,"d":"5.94E-12"},"transmembrane protein.","AT5G49970","PPOX",195.58,-1.4212,0.17783,-7.9917,{"v":1.33e-15,"d":"1.33E-15"},{"v":2.8e-14,"d":"2.80E-14"},"full_name=pyridoxin (pyrodoxamine) 5'-phosphate oxidase. pyridoxin (pyrodoxamine) 5'-phosphate oxidase. encodes the bifunctional pyridoxine (pyridoxamine) 5%E2%80%99-phosphate oxidase (PPOX)(EC 1.4.3.5) that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group)","AT2G36420","TRM27",75.524,-3.8071,0.39705,-9.5883,{"v":8.95e-22,"d":"8.95E-22"},{"v":1.82e-20,"d":"1.82E-20"},"full_name=TON1 Recruiting Motif 27. nucleolin-like protein.","AT4G23060","IQD22",172.11,1.2773,0.17419,7.3329,2.25E-13,4.46E-12,"full_name=IQ-domain 22. IQ-domain 22."]
["AT2G47890",null,124.18,1.3781,0.20174,6.8313,{"v":8.42e-12,"d":"8.42E-12"},1.88E-10,"B-box type zinc finger protein with CCT domain-containing protein.","AT2G21530",null,40.315,-2.836,0.38846,-7.3007,{"v":2.86e-13,"d":"2.86E-13"},{"v":6.21e-12,"d":"6.21E-12"},"SMAD/FHA domain-containing protein.","AT5G54470","BBX29",75.661,-2.1656,0.27111,-7.9881,1.37E-15,{"v":2.88e-14,"d":"2.88E-14"},"full_name=B-box domain protein 29. B-box type zinc finger family protein.","AT3G20440","EMB2729",81.125,2.6666,0.2783,9.5817,{"v":9.54e-22,"d":"9.54E-22"},1.94E-20,"full_name=EMBRYO DEFECTIVE 2729. Alpha amylase family protein. Encodes BE1, a putative glycoside hydrolase. Involved in organogenesis and somatic embryogenesis by regulating carbohydrate metabolism. Mutation in BE1 has pleotrophic effect on the whole plant development.","AT3G08730","PK1",197,1.1665,0.15925,7.3251,{"v":2.39e-13,"d":"2.39E-13"},{"v":4.73e-12,"d":"4.73E-12"},"full_name=protein-serine kinase 1. protein-serine kinase 1. Encodes a protein-serine kinase that phosphorylates ribosomal protein in vitro. Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Involved in translational up-regulation of ribosomal proteins. Phosphorylated by PDK1. Interacts with RAPTOR1, which in turn interacts with TOR. SPK6 activity is affected by osmotic stress, and plants overexpressing S6k1 are hypersensitive to osmotic stress. The gene is expressed in all tissues examined, with highest expression level detected in metabolically active tissues."]
["AT3G05510",null,152.39,1.2869,0.1884,6.8308,{"v":8.44e-12,"d":"8.44E-12"},{"v":1.89e-10,"d":"1.89E-10"},"Phospholipid/glycerol acyltransferase family protein.","AT3G50240","KICP-02",178.64,-1.2759,0.17478,-7.3003,{"v":2.87e-13,"d":"2.87E-13"},{"v":6.22e-12,"d":"6.22E-12"},"ATP binding microtubule motor family protein. Encodes a kinesin-related protein.","AT3G11660","NHL1",269.42,-1.3617,0.17064,-7.9796,1.47E-15,{"v":3.08e-14,"d":"3.08E-14"},"full_name=NDR1/HIN1-like 1. NDR1/HIN1-like 1. encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus. Localization of the gene product is similar to that of NHL3 (plasma membrane) but it is yet inconclusive.","AT1G48920","NUC-L1",4676.4,0.64991,0.067832,9.5812,{"v":9.59e-22,"d":"9.59E-22"},1.95E-20,"full_name=nucleolin like 1. nucleolin like 1. Encodes ATNUC-L1 (NUCLEOLIN LIKE 1), the predominant form of the two nucleolin proteins found in Arabidopsis. This protein is involved in rRNA processing, ribosome biosynthesis, and vascular pattern formation. PARL1 localizes to the nucleolus and parl1 mutants accumulate elevated levels of the unspliced 35S pre-rRNA. parl1 mutants also have defects in cotyledon, leaf, sepal, and petal vein patterning and have reduced stature, reduced fertility, increased bushiness, and reduced root length. The sugar-induced expression of ribosome proteins is also reduced in parl1 mutants.","AT4G39780",null,41.948,3.6281,0.49638,7.3092,{"v":2.69e-13,"d":"2.69E-13"},{"v":5.31e-12,"d":"5.31E-12"},"Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4."]
["AT5G17530",null,630.54,0.74761,0.10948,6.8285,{"v":8.58e-12,"d":"8.58E-12"},{"v":1.91e-10,"d":"1.91E-10"},"phosphoglucosamine mutase family protein.","AT2G40150","TBL28",161.84,-1.2771,0.17535,-7.2833,{"v":3.26e-13,"d":"3.26E-13"},{"v":7.04e-12,"d":"7.04E-12"},"full_name=TRICHOME BIREFRINGENCE-LIKE 28. TRICHOME BIREFRINGENCE-LIKE 28. Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT3G48660",null,784.44,1.0096,0.12653,7.9793,1.47E-15,3.09E-14,"transmembrane protein, putative (DUF 3339).","AT5G44360","ATBBE23",236.47,-1.4126,0.1475,-9.5773,{"v":9.96e-22,"d":"9.96E-22"},2.02E-20,"FAD-binding Berberine family protein.","AT3G15180",null,1497.3,-0.59486,0.081569,-7.2928,{"v":3.04e-13,"d":"3.04E-13"},{"v":6e-12,"d":"6.00E-12"},"ARM repeat superfamily protein."]
["AT1G05470","CVP2",63.048,-2.1026,0.30797,-6.8272,{"v":8.66e-12,"d":"8.66E-12"},{"v":1.93e-10,"d":"1.93E-10"},"full_name=COTYLEDON VASCULAR PATTERN 2. DNAse I-like superfamily protein. Encodes an inositol polyphosphate 5' phosphatase (5PTase) that is required for the proper recruitment of cells into developing vascular tissue in leaves and cotyledons. It is most similar to Type I 5PTases that are known to cleave a phosphate from IP3 or IP4. cvp2 mutants have elevated levels of IP3 and are hypersensitive to ABA in seed germination assays.","AT2G34170","DEG21",37.723,-3.2489,0.4461,-7.283,{"v":3.26e-13,"d":"3.26E-13"},{"v":7.05e-12,"d":"7.05E-12"},"hypothetical protein (DUF688).","AT5G52280",null,104.97,-1.9941,0.24995,-7.9778,1.49E-15,{"v":3.12e-14,"d":"3.12E-14"},"Myosin heavy chain-related protein.","AT1G53100",null,93.133,-3.1717,0.33148,-9.5682,1.09E-21,{"v":2.2e-20,"d":"2.20E-20"},"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein.","AT1G18720",null,1120.4,-1.1125,0.15256,-7.2921,{"v":3.05e-13,"d":"3.05E-13"},{"v":6.02e-12,"d":"6.02E-12"},"ER membrane protein, putative (DUF962)."]
["AT1G18100","E12A11",3438.5,-0.77883,0.11415,-6.823,8.92E-12,{"v":1.99e-10,"d":"1.99E-10"},"PEBP (phosphatidylethanolamine-binding protein) family protein. Encodes a member of the FT and TFL1 family of phosphatidylethanolamine-binding proteins. It is expressed in seeds and up-regulated in response to ABA. Loss of function mutants show decreased rate of germination in the presence of ABA. ABA dependent regulation is mediated by both ABI3 and ABI5. ABI5 promotes MFT expression, primarily in the radicle-hypocotyl transition zone and ABI3 suppresses it in the seed.","AT1G64670","BDG1",63.262,-2.2683,0.31151,-7.2817,{"v":3.3e-13,"d":"3.30E-13"},{"v":7.11e-12,"d":"7.11E-12"},"full_name=BODYGUARD1. alpha/beta-Hydrolases superfamily protein. Encodes a epidermally expressed extracellular protein that likely functions as an alpha-beta hydrolase and is required for normal cuticle formation. Homozygous mutant plants are dwarfed and have abnormal leaves, collapsed cells, reduced numbers of trichomes. The specific role of BDG is unclear: it may function in cutin biosynthesis or as a cross-linking enzyme in the cell wall itself.","AT5G28640","AN3",229.98,-1.7765,0.2228,-7.9733,{"v":1.55e-15,"d":"1.55E-15"},{"v":3.23e-14,"d":"3.23E-14"},"full_name=ANGUSTIFOLIA 3. SSXT family protein. Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors.","AT2G18950","HPT1",65.103,-3.436,0.35925,-9.5644,1.13E-21,{"v":2.28e-20,"d":"2.28E-20"},"full_name=homogentisate phytyltransferase 1. homogentisate phytyltransferase 1. Encodes homogentisate phytyltransferase involved in tocopherol biosynthesis. Has impact on seed longevity and plays a role in the adaptation to low temperature stress, notably phloem loading.","AT1G41830","SKS6",144.77,-1.6859,0.23149,-7.2831,{"v":3.26e-13,"d":"3.26E-13"},{"v":6.43e-12,"d":"6.43E-12"},"full_name=SKU5-similar 6. SKU5-similar 6."]
["AT5G45830","DOG1",2028.9,1.0558,0.15484,6.8186,{"v":9.19e-12,"d":"9.19E-12"},{"v":2.04e-10,"d":"2.04E-10"},"full_name=DELAY OF GERMINATION 1. delay of germination 1. Encodes DOG1 (DELAY OF GERMINATION 1). A quantitative trait locus involved in the control of seed dormancy. Belongs to a novel plant-specific gene family whose members include: DOG1-like 1-4 (DOGL1-4, At4g18660, At4g18680, At4g18690, At4g18650 respectively) and DOG1. DOG1 expression is seed-specific.","AT3G26770",null,428.57,0.99366,0.13665,7.2716,3.55E-13,{"v":7.65e-12,"d":"7.65E-12"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT1G73885",null,85.534,2.0318,0.25485,7.9724,{"v":1.56e-15,"d":"1.56E-15"},3.25E-14,"AT-rich interactive domain protein.","AT1G17170","GSTU24",103.89,-2.6375,0.27581,-9.5627,1.15E-21,2.32E-20,"full_name=glutathione S-transferase TAU 24. glutathione S-transferase TAU 24. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","AT4G10850","SWEET7",39.198,-4.7254,0.64929,-7.2778,{"v":3.39e-13,"d":"3.39E-13"},{"v":6.68e-12,"d":"6.68E-12"},"Nodulin MtN3 family protein."]
["AT5G49990",null,1011.2,0.79102,0.11604,6.8167,{"v":9.32e-12,"d":"9.32E-12"},{"v":2.07e-10,"d":"2.07E-10"},"Xanthine/uracil permease family protein.","AT3G12550","FDM3",279.38,-1.0809,0.1487,-7.2685,{"v":3.63e-13,"d":"3.63E-13"},{"v":7.82e-12,"d":"7.82E-12"},"full_name=factor of DNA methylation 3. XH/XS domain-containing protein. Belongs to a subgroup of SGS3-like proteins that act redundantly in RNA-directed DNA methylation: AT1G15910 (FDM1), AT4G00380 (FDM2), AT3G12550 (FDM3), AT1G13790 (FDM4), AT1G80790 (FDM5).","AT4G23010","UTR2",490.78,-1.3066,0.16392,-7.9707,1.58E-15,{"v":3.29e-14,"d":"3.29E-14"},"full_name=UDP-galactose transporter 2. UDP-galactose transporter 2.","AT5G51820","PGM",169.32,-1.9923,0.20853,-9.5539,{"v":1.25e-21,"d":"1.25E-21"},2.52E-20,"full_name=phosphoglucomutase. phosphoglucomutase. Encodes a plastid isoform of the enzyme phosphoglucomutase involved in controlling photosynthetic carbon flow. Effective petiole movement against the direction of the gravity requires functional PGM activity that is required for full development of amyloplasts.","AT1G34630",null,157.6,1.457,0.20059,7.2636,{"v":3.77e-13,"d":"3.77E-13"},{"v":7.41e-12,"d":"7.41E-12"},"transmembrane protein."]
["AT3G10405",null,40.428,-2.5136,0.36888,-6.8142,{"v":9.48e-12,"d":"9.48E-12"},{"v":2.1E-10,"d":"2.10E-10"},"vacuolar acid trehalase.","AT1G01225",null,163.08,-1.2931,0.17792,-7.2678,{"v":3.65e-13,"d":"3.65E-13"},{"v":7.85e-12,"d":"7.85E-12"},"NC domain-containing protein-like protein.","AT4G27430","CIP7",534.85,-1.1311,0.14192,-7.9703,1.58E-15,{"v":3.3e-14,"d":"3.30E-14"},"full_name=COP1-interacting protein 7. COP1-interacting protein 7. Positive regulator of light-regulated genes. Novel nuclear protein which requires light for its high level expression.","AT2G39250","SNZ",58.214,-5.3996,0.56608,-9.5385,1.45E-21,2.92E-20,"full_name=SCHNARCHZAPFEN. Integrase-type DNA-binding superfamily protein. Encodes a AP2 domain transcription factor that can repress flowering. SNZ and its paralogous gene, SCHLAFMUTZE (SMZ), share a signature with partial complementarity to the miR172 microRNA, whose precursor is induced upon flowering.","AT1G04920","SPS3F",687.73,0.78229,0.1077,7.2633,3.78E-13,{"v":7.42e-12,"d":"7.42E-12"},"full_name=sucrose phosphate synthase 3F. sucrose phosphate synthase 3F. Encodes a protein with putative sucrose-phosphate synthase activity."]
["AT3G03910","GDH3",28.146,3.3293,0.48996,6.7951,{"v":1.08e-11,"d":"1.08E-11"},{"v":2.4E-10,"d":"2.40E-10"},"full_name=glutamate dehydrogenase 3. glutamate dehydrogenase 3. GDH3 encodes a member of the glutamate dehydrogenease family. Its expression is upregulated in response to cytokinin and it may play a role in the control of nitrogen metabolism in leaf development.","AT1G04410","c-NAD-MDH1",1008.9,-0.84777,0.11666,-7.2668,3.68E-13,{"v":7.9e-12,"d":"7.90E-12"},"full_name=cytosolic-NAD-dependent malate dehydrogenase 1. Lactate/malate dehydrogenase family protein. predicted to encode a cytosolic malate dehydrogenase.","AT4G37430","CYP91A2",174.91,1.7299,0.21707,7.9691,{"v":1.6E-15,"d":"1.60E-15"},3.32E-14,"full_name=cytochrome P450, family 91, subfamily A, polypeptide 2. cytochrome P450, family 91, subfamily A, polypeptide 2. Encodes a member of the CYP81F cytochrome P450 monooxygenase subfamily.","AT4G01250","WRKY22",182.95,-1.6714,0.17534,-9.5321,1.54E-21,{"v":3.1E-20,"d":"3.10E-20"},"WRKY family transcription factor. AtWRKY22 is a member of WRKY Transcription Factor; Group II-e. It is involved in regulation of dark induced leaf senescence.","AT3G24080",null,625.18,-0.9129,0.12574,-7.2602,{"v":3.87e-13,"d":"3.87E-13"},{"v":7.58e-12,"d":"7.58E-12"},"KRR1 family protein."]
["AT2G33830","DRM2",253.21,-1.6267,0.23953,-6.7913,{"v":1.11e-11,"d":"1.11E-11"},{"v":2.46e-10,"d":"2.46E-10"},"Dormancy/auxin associated family protein.","AT4G33000","CBL10",60.199,-2.3835,0.32804,-7.2659,{"v":3.71e-13,"d":"3.71E-13"},{"v":7.95e-12,"d":"7.95E-12"},"full_name=calcineurin B-like protein 10. calcineurin B-like protein 10. Encodes a member of the calcineurin B-like calcium sensor gene family. Mediates salt tolerance by regulating ion homeostasis in Arabidopsis.","AT3G47790","ABCA8",138,-2.6373,0.33099,-7.9679,{"v":1.61e-15,"d":"1.61E-15"},{"v":3.35e-14,"d":"3.35E-14"},"full_name=ATP-binding cassette A8. ABC2 homolog 7. member of ATH subfamily","AT1G55840",null,309.72,-1.285,0.13497,-9.5206,{"v":1.72e-21,"d":"1.72E-21"},{"v":3.46e-20,"d":"3.46E-20"},"Sec14p-like phosphatidylinositol transfer family protein.","AT4G26590","OPT5",106.88,-1.6727,0.23056,-7.255,4.02E-13,{"v":7.87e-12,"d":"7.87E-12"},"full_name=oligopeptide transporter 5. oligopeptide transporter 5. oligopeptide transporter"]
["AT1G69700","HVA22C",92.834,-1.7016,0.25061,-6.7898,{"v":1.12e-11,"d":"1.12E-11"},{"v":2.48e-10,"d":"2.48E-10"},"full_name=HVA22 homologue C. HVA22 homologue C. Part of the AtHVA22 family. Protein expression is ABA- and stress-inducible.","AT4G10690",null,289.96,1.1342,0.15623,7.2594,{"v":3.89e-13,"d":"3.89E-13"},{"v":8.32e-12,"d":"8.32E-12"},"transposable_element_gene.","AT5G02970",null,109.73,-1.8807,0.23603,-7.9678,{"v":1.62e-15,"d":"1.62E-15"},{"v":3.35e-14,"d":"3.35E-14"},"alpha/beta-Hydrolases superfamily protein.","AT1G26400","ATBBE5",1303.7,-1.0653,0.11192,-9.5182,1.76E-21,{"v":3.54e-20,"d":"3.54E-20"},"FAD-binding Berberine family protein.","AT4G13780",null,510.68,0.76187,0.10506,7.2519,{"v":4.11e-13,"d":"4.11E-13"},{"v":8.04e-12,"d":"8.04E-12"},"methionine-tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS."]
["AT5G67030","ABA1",776.42,0.74922,0.11036,6.7887,{"v":1.13e-11,"d":"1.13E-11"},{"v":2.5e-10,"d":"2.50E-10"},"full_name=ABA DEFICIENT 1. zeaxanthin epoxidase (ZEP) (ABA1). Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.","AT1G01650","SPPL4",516.68,0.90703,0.12512,7.2491,{"v":4.2e-13,"d":"4.20E-13"},{"v":8.97e-12,"d":"8.97E-12"},"full_name=SIGNAL PEPTIDE PEPTIDASE-LIKE 4. SIGNAL PEPTIDE PEPTIDASE-LIKE 4.","AT1G32060","PRK",55.622,-2.7094,0.34006,-7.9673,{"v":1.62e-15,"d":"1.62E-15"},{"v":3.36e-14,"d":"3.36E-14"},"full_name=phosphoribulokinase. phosphoribulokinase.","AT1G67820",null,317.21,1.2955,0.13612,9.5175,{"v":1.77e-21,"d":"1.77E-21"},{"v":3.56e-20,"d":"3.56E-20"},"Protein phosphatase 2C family protein.","AT2G17787",null,333.13,1.006,0.13875,7.2503,{"v":4.16e-13,"d":"4.16E-13"},{"v":8.12e-12,"d":"8.12E-12"},"cylicin."]
["AT3G02180","SP1L3",150.13,-1.4151,0.20855,-6.7855,{"v":1.16e-11,"d":"1.16E-11"},2.55E-10,"full_name=SPIRAL1-like3. SPIRAL1-like3. SPIRAL1-LIKE3 belongs to a six-member gene family in Arabidopsis; all members share high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root, leaf and petal growth as a result of defective anisotropic cell expansion.","AT4G30150",null,231.32,1.1441,0.158,7.2412,{"v":4.45e-13,"d":"4.45E-13"},{"v":9.5e-12,"d":"9.50E-12"},"Urb2/Npa2 family protein.","AT5G49460","ACLB-2",105.88,-1.9794,0.24857,-7.9632,{"v":1.68e-15,"d":"1.68E-15"},3.47E-14,"full_name=ATP citrate lyase subunit B 2. ATP citrate lyase subunit B 2. One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL)","AT1G11860",null,681.75,0.96199,0.1011,9.5152,{"v":1.81e-21,"d":"1.81E-21"},{"v":3.63e-20,"d":"3.63E-20"},"Glycine cleavage T-protein family.","AT1G30400","ABCC1",547.11,0.77229,0.10653,7.2499,{"v":4.17e-13,"d":"4.17E-13"},{"v":8.14e-12,"d":"8.14E-12"},"full_name=ATP-binding cassette C1. multidrug resistance-associated protein 1. glutathione S-conjugate transporting ATPase (AtMRP1) mRNA. An ABCC-type arsenite-phytochelatin transporter. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim."]
["AT4G13540","ADR",150.6,-1.3789,0.20344,-6.778,{"v":1.22e-11,"d":"1.22E-11"},{"v":2.68e-10,"d":"2.68E-10"},"golgin family A protein.","AT3G55850","LAF3",237.97,-1.1785,0.16283,-7.2375,{"v":4.57e-13,"d":"4.57E-13"},{"v":9.75e-12,"d":"9.75E-12"},"full_name=LONG AFTER FAR-RED 3. Amidohydrolase family. Encodes a product that might regulate nucleo-cytoplasmic trafficking of an intermediate(s) involved in phyA signal transduction. Differs from isoform 1 only in the first few N-terminal amino acids.","AT1G27080","NRT1.6",156.03,-1.9066,0.23975,-7.9524,{"v":1.83e-15,"d":"1.83E-15"},3.78E-14,"full_name=nitrate transporter 1.6. nitrate transporter 1.6. Encodes a protein with low-affinity nitrate transporter activity that is expressed in the vascular tissue of the funiculus and the silique. This plasma membrane-localized enzyme is predicted to have 12 transmembrane domains. Plants lacking NRT1.6 have reduced levels of nitrate in their seeds and have increased levels of early embryonic developmental defects and seed abortion.","AT1G68240",null,154.62,8.1225,0.85423,9.5086,{"v":1.93e-21,"d":"1.93E-21"},{"v":3.86e-20,"d":"3.86E-20"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT2G26530","AR781",37.825,4.4312,0.61131,7.2486,{"v":4.21e-13,"d":"4.21E-13"},{"v":8.2e-12,"d":"8.20E-12"},"AR781, pheromone receptor-like protein (DUF1645). unknown function"]
["AT5G05600","JOX2",113.81,1.8586,0.27426,6.7767,1.23E-11,{"v":2.71e-10,"d":"2.71E-10"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT4G16690","MES16",434.19,-1.0338,0.14291,-7.2339,{"v":4.69e-13,"d":"4.69E-13"},{"v":1e-11,"d":"1.00E-11"},"full_name=methyl esterase 16. methyl esterase 16. Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on MeSA, MeGA4, or MEGA9 in vitro. Although MES16 is similar to MES17, a MeIAA hydrolase, two mes16 mutant lines (SALK_151578) and (SALK_139756) do not show altered sensitivity to MeIAA in root growth assays. MES16 transcripts appear to be more than 10-fold less abundant than those of MES17 in roots.","AT1G68060","MAP70-1",127,-1.7106,0.21512,-7.952,{"v":1.84e-15,"d":"1.84E-15"},{"v":3.79e-14,"d":"3.79E-14"},"full_name=microtubule-associated proteins 70-1. microtubule-associated proteins 70-1. Encodes a microtubule associated protein (MAP70-1). Expressed in all tissues.","AT4G04955","ALN",79.016,-3.027,0.31834,-9.5086,{"v":1.93e-21,"d":"1.93E-21"},{"v":3.86e-20,"d":"3.86E-20"},"full_name=allantoinase. allantoinase. Encodes an allantoinase which is involved in allantoin degradation and assimilation. Gene expression was induced when allantoin was added to the medium. The insertion mutant, ataln m2-1, did not grow well on the MS medium where allantoin, instead of ammonium nitrate, was supplied.","AT5G01500","TAAC",824.82,-0.61759,0.085223,-7.2468,4.27E-13,{"v":8.31e-12,"d":"8.31E-12"},"full_name=thylakoid ATP/ADP carrier. thylakoid ATP/ADP carrier. encodes an ATP/ADP carrier that is located to the thylakoid membrane involved in providing ATP during thylakoid biogenesis and turnover"]
["AT1G19330","AFR2",482.82,-0.80361,0.11863,-6.7738,1.25E-11,{"v":2.76e-10,"d":"2.76E-10"},"histone deacetylase complex subunit.","AT1G80130",null,33.217,-3.6755,0.50834,-7.2305,{"v":4.81e-13,"d":"4.81E-13"},{"v":1.02e-11,"d":"1.02E-11"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT3G14067","SASP",1691.3,-1.021,0.12841,-7.9513,{"v":1.85e-15,"d":"1.85E-15"},{"v":3.81e-14,"d":"3.81E-14"},"Subtilase family protein. Encodes a protein with similarity to serine protease, subtilisin, that is upregulated during senescence and expressed in the arial portions of the plant.Loss of function mutations have increased branch number but normal silique length and seed set and therefore have increased fertility.","AT3G59010","PME61",53.747,-4.65,0.4891,-9.5071,{"v":1.96e-21,"d":"1.96E-21"},{"v":3.91e-20,"d":"3.91E-20"},"full_name=pectin methylesterase 61. pectin methylesterase 61. Encodes PME35, a pectin methylesterase. PME35-mediated demethylesterification of the primary cell wall regulates the mechanical strength of the supporting tissue.","AT5G16110",null,519.97,0.77523,0.10698,7.2465,{"v":4.28e-13,"d":"4.28E-13"},{"v":8.31e-12,"d":"8.31E-12"},"hypothetical protein."]
["AT4G34260","FUC95A",1257.8,-0.92813,0.13709,-6.7701,1.29E-11,{"v":2.82e-10,"d":"2.82E-10"},"1,2-alpha-L-fucosidase.","AT2G26080","GLDP2",1262.3,-0.73133,0.10131,-7.2187,{"v":5.25e-13,"d":"5.25E-13"},{"v":1.12e-11,"d":"1.12E-11"},"full_name=glycine decarboxylase P-protein 2. glycine decarboxylase P-protein 2.","AT1G68530","KCS6",1043.6,-1.547,0.19457,-7.9509,{"v":1.85e-15,"d":"1.85E-15"},{"v":3.82e-14,"d":"3.82E-14"},"full_name=3-ketoacyl-CoA synthase 6. 3-ketoacyl-CoA synthase 6. Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT4G28660","PSB28",208.68,-1.9473,0.20515,-9.4919,2.27E-21,{"v":4.52e-20,"d":"4.52E-20"},"full_name=photosystem II reaction center PSB28 protein. photosystem II reaction center PSB28 protein. Similar to PsbW subunit of photosystem II.","AT1G27990",null,8520.9,-0.44827,0.061872,-7.2451,{"v":4.32e-13,"d":"4.32E-13"},{"v":8.39e-12,"d":"8.39E-12"},"transmembrane protein."]
["AT5G04340","ZAT6",342.34,-1.2255,0.18106,-6.7681,1.31E-11,{"v":2.86e-10,"d":"2.86E-10"},"full_name=zinc finger of Arabidopsis thaliana 6. 6. putative c2h2 zinc finger transcription factor mRNA,","AT3G13190",null,59.07,-2.1779,0.30263,-7.1967,6.17E-13,1.31E-11,"WEB family protein (DUF827).","AT4G05020","NDB2",391.59,1.3351,0.16806,7.9444,{"v":1.95e-15,"d":"1.95E-15"},{"v":4.02e-14,"d":"4.02E-14"},"full_name=NAD(P)H dehydrogenase B2. NAD(P)H dehydrogenase B2.","AT2G42000","AtMT4a",5669.7,1.2983,0.13681,9.4899,{"v":2.31e-21,"d":"2.31E-21"},{"v":4.6e-20,"d":"4.60E-20"},"full_name=Arabidopsis thaliana metallothionein 4a. plant EC metallothionein family protein. AtMT4a is a member of Type 4 metallothionein (MT) genes. It is involved in the early develoment of the embryo and in the accumulation of metal ions especially Zn in the seeds.","AT3G55260","HEXO1",459.7,-0.77695,0.10729,-7.2416,{"v":4.43e-13,"d":"4.43E-13"},{"v":8.59e-12,"d":"8.59E-12"},"full_name=beta-hexosaminidase 1. beta-hexosaminidase 1. Encodes a protein with &#946;-hexosaminidase activity (the enzyme is active with p-nitrophenyl-&#946;-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-&#946;-N-acetylgalactosaminide). The enzyme displays no distinct preference for a specific terminal GlcNAc residue and indeed cleaved the asialoagalactodabsylglycopeptide GnGn to a mixture of products."]
["AT5G08000","E13L3",34.247,-6.0267,0.89066,-6.7665,1.32E-11,{"v":2.89e-10,"d":"2.89E-10"},"full_name=glucan endo-1,3-beta-glucosidase-like protein 3. glucan endo-1,3-beta-glucosidase-like protein 3. Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and binds callose.","AT3G56880",null,659.71,0.81562,0.11334,7.1965,{"v":6.18e-13,"d":"6.18E-13"},1.31E-11,"VQ motif-containing protein.","AT1G27461","DRG",7509.7,1.0178,0.12821,7.9384,{"v":2.05e-15,"d":"2.05E-15"},{"v":4.21e-14,"d":"4.21E-14"},"hypothetical protein.","AT5G56170","LLG1",332.77,-1.2517,0.13194,-9.4873,{"v":2.37e-21,"d":"2.37E-21"},{"v":4.71e-20,"d":"4.71E-20"},"full_name=LORELEI-LIKE-GPI-ANCHORED PROTEIN 1. LORELEI-LIKE-GPI-ANCHORED PROTEIN 1.","AT1G62380","ACO2",90.672,-2.2578,0.31179,-7.2412,{"v":4.45e-13,"d":"4.45E-13"},{"v":8.61e-12,"d":"8.61E-12"},"full_name=ACC oxidase 2. ACC oxidase 2. Encodes a protein similar to 1-aminocyclopropane-1-carboxylic oxidase (ACC oxidase). Expression of the AtACO2 transcripts is affected by ethylene."]
["AT1G79850","RPS17",153.2,-1.2503,0.18487,-6.763,1.35E-11,{"v":2.95e-10,"d":"2.95E-10"},"full_name=ribosomal protein S17. ribosomal protein S17. nuclear-encoded 30S chloroplast ribosomal protein S17","AT4G38380",null,106.89,1.5284,0.21245,7.1939,{"v":6.29e-13,"d":"6.29E-13"},1.33E-11,"MATE efflux family protein.","AT2G27830",null,36.416,3.6088,0.45462,7.938,{"v":2.05e-15,"d":"2.05E-15"},{"v":4.22e-14,"d":"4.22E-14"},"hypothetical protein.","AT1G13090","CYP71B28",470.34,1.1263,0.11877,9.4829,{"v":2.47e-21,"d":"2.47E-21"},{"v":4.91e-20,"d":"4.91E-20"},"full_name=cytochrome P450, family 71, subfamily B, polypeptide 28. cytochrome P450, family 71, subfamily B, polypeptide 28. putative cytochrome P450","AT3G53040",null,30070,-0.56674,0.078274,-7.2405,{"v":4.47e-13,"d":"4.47E-13"},{"v":8.65e-12,"d":"8.65E-12"},"late embryogenesis abundant protein, putative / LEA protein."]
["AT1G74310","HSP101",1245.2,0.68707,0.10169,6.7567,1.41E-11,{"v":3.08e-10,"d":"3.08E-10"},"full_name=heat shock protein 101. heat shock protein 101. Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.","AT3G48330","PIMT1",368.23,-1.0295,0.14316,-7.1916,{"v":6.4E-13,"d":"6.40E-13"},1.35E-11,"full_name=protein-l-isoaspartate methyltransferase 1. protein-l-isoaspartate methyltransferase 1. Encodes protein-L-isoaspartate methyltransferase. Important for maintaining viability as the seed ages. Involved in germination.","AT5G22880","HTB2",120.83,1.8041,0.22764,7.9252,2.28E-15,{"v":4.67e-14,"d":"4.67E-14"},"full_name=histone B2. histone B2. Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.","AT1G73020","TMEM16",321.78,1.3294,0.14042,9.4671,{"v":2.88e-21,"d":"2.88E-21"},{"v":5.7e-20,"d":"5.70E-20"},"anoctamin-like protein.","AT5G64300","GCH",355.34,0.89099,0.12308,7.239,{"v":4.52e-13,"d":"4.52E-13"},{"v":8.73e-12,"d":"8.73E-12"},"full_name=GTP cyclohydrolase II. GTP cyclohydrolase II. encodes GTP cyclohydrolase II that can functionally complement E. coli mutant deficient in this gene. It also has 3,4-dihydroxy-2-butanone-4-phosphate synthase activity which makes it a bifunctional enzyme involved in the formation of the pyrimidine and of the carbohydrate from GTP and ribulose-5-phosphate, respectively"]
["AT3G26140",null,71.467,1.8108,0.26826,6.7503,1.48E-11,{"v":3.22e-10,"d":"3.22E-10"},"Cellulase (glycosyl hydrolase family 5) protein.","AT5G01650",null,356.82,-0.98252,0.13677,-7.1837,{"v":6.78e-13,"d":"6.78E-13"},1.43E-11,"Tautomerase/MIF superfamily protein.","AT5G17380",null,765.57,0.87407,0.11034,7.9216,{"v":2.34e-15,"d":"2.34E-15"},{"v":4.8e-14,"d":"4.80E-14"},"Thiamine pyrophosphate dependent pyruvate decarboxylase family protein.","AT1G03380","ATG18G",632.32,0.97998,0.10352,9.467,{"v":2.88e-21,"d":"2.88E-21"},{"v":5.7e-20,"d":"5.70E-20"},"full_name=homolog of yeast autophagy 18 (ATG18) G. yeast autophagy 18 G-like protein.","AT3G10985","SAG20",96.711,2.0347,0.28115,7.237,{"v":4.59e-13,"d":"4.59E-13"},{"v":8.85e-12,"d":"8.85E-12"},"full_name=senescence associated gene 20. senescence associated gene 20. A senescence-associated gene whose expression is induced in response to treatment with Nep1, a fungal protein that causes necrosis."]
["AT2G43880",null,176.85,1.4531,0.21569,6.7372,1.62E-11,{"v":3.52e-10,"d":"3.52E-10"},"Pectin lyase-like superfamily protein.","AT3G03341",null,309.71,1.2289,0.17135,7.1718,{"v":7.4e-13,"d":"7.40E-13"},1.56E-11,"cold-regulated protein.","AT5G49280",null,256.45,-1.3135,0.16588,-7.9184,{"v":2.41e-15,"d":"2.41E-15"},{"v":4.92e-14,"d":"4.92E-14"},"hydroxyproline-rich glycoprotein family protein.","AT1G28330","DYL1",1493.6,1.07,0.11303,9.4667,{"v":2.89e-21,"d":"2.89E-21"},{"v":5.71e-20,"d":"5.71E-20"},"full_name=dormancy-associated protein-like 1. dormancy-associated protein-like 1. dormancy-associated protein (DRM1)","AT5G13970",null,498.07,0.79461,0.10988,7.2315,{"v":4.78e-13,"d":"4.78E-13"},{"v":9.21e-12,"d":"9.21E-12"},"midasin-like protein."]
["AT5G36185",null,29.807,-5.4024,0.80189,-6.737,1.62E-11,{"v":3.52e-10,"d":"3.52E-10"},"pseudogene.","AT4G03415","PP2C52",110.25,-1.51,0.21073,-7.1654,{"v":7.76e-13,"d":"7.76E-13"},{"v":1.63e-11,"d":"1.63E-11"},"full_name=2C-type protein phosphatase 52. Protein phosphatase 2C family protein. Encodes a myristoylated 2C-type protein phosphatase that interacts with AGB1 and is localized to the plasma membrane.","AT4G28760","TRM20",646.49,1.0075,0.12726,7.9164,{"v":2.44e-15,"d":"2.44E-15"},{"v":4.99e-14,"d":"4.99E-14"},"full_name=TON1 Recruiting Motif 20. methyl-coenzyme M reductase II subunit gamma, putative (DUF3741).","AT1G19850","MP",59.838,-3.643,0.38521,-9.4573,{"v":3.16e-21,"d":"3.16E-21"},{"v":6.24e-20,"d":"6.24E-20"},"full_name=MONOPTEROS. Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein. Encodes a transcription factor (IAA24) mediating embryo axis formation and vascular development. Similar to AUXIN RESPONSIVE FACTOR 1 (ARF1) shown to bind to auxin responsive elements (AREs), and to the maize transcriptional activator VIVIPAROUS 1( VP1). In situ hybridization shows expression in provascular tissue of embryos, the emerging shoot primordia, then is restricted to provascular tissue, and in the root central vascular cylinder.","AT5G64070","PI-4KBETA1",961.82,0.61084,0.08453,7.2263,{"v":4.96e-13,"d":"4.96E-13"},{"v":9.56e-12,"d":"9.56E-12"},"full_name=phosphatidylinositol 4-OH kinase beta1. phosphatidylinositol 4-OH kinase beta1. Encodes a phosphatidylinositol 4-OH kinase, PI-4Kbeta1. Arabidopsis contains 12 PI-4Ks in three separate families: PI-4Kalphs, PI-4kbeta, and PI-4Kgamma. PI-4Kbeta1 is 83% identical to PI-4kbeta2 encoded by At5g09350. Interacts with the RabA4b GTPase. Important for polarized root hair growth as the loss of this gene and its close relative PI-4kbeta2, leads to the formation of abnormal root hairs."]
["AT2G47650","UXS4",173.62,-1.1946,0.17732,-6.7369,1.62E-11,{"v":3.52e-10,"d":"3.52E-10"},"full_name=UDP-xylose synthase 4. UDP-xylose synthase 4. encodes a protein similar to UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.","AT2G28840","XBAT31",244.41,-1.1837,0.16522,-7.1643,7.82E-13,{"v":1.65e-11,"d":"1.65E-11"},"full_name=XB3 ortholog 1 in Arabidopsis thaliana. hypothetical protein.","AT2G44160","MTHFR2",166.81,-1.4821,0.1874,-7.9085,{"v":2.61e-15,"d":"2.61E-15"},{"v":5.32e-14,"d":"5.32E-14"},"full_name=methylenetetrahydrofolate reductase 2. methylenetetrahydrofolate reductase 2. methylenetetrahydrofolate reductase MTHFR2 mRNA, complete","AT1G27090",null,592.77,1.1342,0.12003,9.4498,{"v":3.39e-21,"d":"3.39E-21"},{"v":6.7e-20,"d":"6.70E-20"},"glycine-rich protein.","AT5G03470","ATB' ALPHA",178.69,1.2666,0.17546,7.2185,{"v":5.26e-13,"d":"5.26E-13"},{"v":1.01e-11,"d":"1.01E-11"},"Protein phosphatase 2A regulatory B subunit family protein. Encodes B' regulatory subunit of PP2A (AtB'alpha), putative size of 57 kDa."]
["AT3G17840","RLK902",719.39,-1.108,0.16454,-6.734,{"v":1.65e-11,"d":"1.65E-11"},3.58E-10,"full_name=receptor-like kinase 902. receptor-like kinase 902. Encodes a receptor-like kinase found at the cell surface of various tissues. Its function remains unknown.","AT5G42290",null,125.38,1.6341,0.22809,7.1641,7.83E-13,{"v":1.65e-11,"d":"1.65E-11"},"transcription activator-like protein.","AT4G37360","CYP81D2",50.377,-3.1581,0.39991,-7.8972,{"v":2.85e-15,"d":"2.85E-15"},5.81E-14,"full_name=cytochrome P450, family 81, subfamily D, polypeptide 2. cytochrome P450, family 81, subfamily D, polypeptide 2. member of CYP81D","AT2G15880","LRX10",130.17,3.0204,0.32,9.4389,{"v":3.77e-21,"d":"3.77E-21"},{"v":7.42e-20,"d":"7.42E-20"},"Leucine-rich repeat (LRR) family protein.","AT3G12780","PGK1",553.14,-0.75727,0.10492,-7.2174,{"v":5.3e-13,"d":"5.30E-13"},{"v":1.02e-11,"d":"1.02E-11"},"full_name=phosphoglycerate kinase 1. phosphoglycerate kinase 1. nuclear phosphoglycerate kinase (PGK1)"]
["AT1G62240",null,1249.8,1.2524,0.18598,6.734,{"v":1.65e-11,"d":"1.65E-11"},3.58E-10,"hypothetical protein.","AT2G45510","CYP704A2",1150.7,0.76476,0.10676,7.1631,{"v":7.89e-13,"d":"7.89E-13"},1.66E-11,"full_name=cytochrome P450, family 704, subfamily A, polypeptide 2. cytochrome P450, family 704, subfamily A, polypeptide 2. member of CYP704A","AT4G04760",null,202.25,-1.5819,0.20065,-7.884,{"v":3.17e-15,"d":"3.17E-15"},{"v":6.46e-14,"d":"6.46E-14"},"Major facilitator superfamily protein.","AT5G03530","RABC2A",169.63,-1.7104,0.18122,-9.4378,{"v":3.81e-21,"d":"3.81E-21"},{"v":7.49e-20,"d":"7.49E-20"},"full_name=RAB GTPase homolog C2A. RAB GTPase homolog C2A. Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. CFP:RabC2a appears to co-localize with peroxisomes.","AT3G16857","RR1",632.71,0.73488,0.10188,7.2131,{"v":5.47e-13,"d":"5.47E-13"},{"v":1.05e-11,"d":"1.05E-11"},"full_name=response regulator 1. response regulator 1. Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Also involved in cytokinin-dependent inhibition of hypocotyl elongation and cytokinin-dependent greening and shooting in tissue culture."]
["AT4G21590","ENDO3",93.494,-1.6217,0.24088,-6.7322,{"v":1.67e-11,"d":"1.67E-11"},{"v":3.62e-10,"d":"3.62E-10"},"full_name=endonuclease 3. endonuclease 3. Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed in the floral meristem and during stamen development.","AT5G23570","SGS3",167.61,-1.2975,0.18127,-7.1579,{"v":8.19e-13,"d":"8.19E-13"},{"v":1.72e-11,"d":"1.72E-11"},"full_name=SUPPRESSOR OF GENE SILENCING 3. XS domain-containing protein / XS zinc finger domain-containing protein-like protein. Required for posttranscriptional gene silencing and natural virus resistance.SGS3 is a member of an 'unknown' protein family. Members of this family have predicted coiled coiled domains suggesting oligomerization and a potential zinc finger domain. Involved in the production of trans-acting siRNAs, through direct or indirect stabilization of cleavage fragments of the primary ta-siRNA transcript. Acts before RDR6 in this pathway.","AT1G16490","MYB58",82.365,-2.2987,0.29158,-7.8838,3.18E-15,{"v":6.46e-14,"d":"6.46E-14"},"full_name=myb domain protein 58. myb domain protein 58. Member of the R2R3 factor gene family.","AT3G06630",null,549.33,1.0108,0.10714,9.4346,{"v":3.93e-21,"d":"3.93E-21"},{"v":7.72e-20,"d":"7.72E-20"},"protein kinase family protein.","AT5G14120",null,2170.9,1.8303,0.25394,7.2075,{"v":5.7e-13,"d":"5.70E-13"},{"v":1.09e-11,"d":"1.09E-11"},"Major facilitator superfamily protein."]
["AT4G13030",null,866.46,0.73408,0.10904,6.732,{"v":1.67e-11,"d":"1.67E-11"},{"v":3.62e-10,"d":"3.62E-10"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT5G40690",null,277.62,1.1951,0.16718,7.1485,8.77E-13,{"v":1.84e-11,"d":"1.84E-11"},"histone-lysine N-methyltransferase trithorax-like protein.","AT4G01070","GT72B1",203.89,-1.4102,0.1789,-7.8823,{"v":3.21e-15,"d":"3.21E-15"},{"v":6.53e-14,"d":"6.53E-14"},"UDP-Glycosyltransferase superfamily protein. the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta","AT5G04370","NAMT1",58.771,-3.1631,0.33531,-9.4334,3.97E-21,{"v":7.79e-20,"d":"7.79E-20"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. A member of the Arabidopsis SABATH methyltransferase gene family. Encodes NAMT1, a methyltransferase that methylates nicotinic acid.","AT5G60460",null,378.25,-1.1603,0.16108,-7.2036,{"v":5.86e-13,"d":"5.86E-13"},{"v":1.12e-11,"d":"1.12E-11"},"Preprotein translocase Sec, Sec61-beta subunit protein."]
["AT3G17680",null,86.328,-1.5913,0.23639,-6.7318,1.68E-11,{"v":3.62e-10,"d":"3.62E-10"},"Kinase interacting (KIP1-like) family protein.","AT3G09800",null,88.264,-1.6955,0.23724,-7.1468,{"v":8.88e-13,"d":"8.88E-13"},{"v":1.86e-11,"d":"1.86E-11"},"SNARE-like superfamily protein.","AT4G18280",null,158.55,1.5473,0.19634,7.881,3.25E-15,{"v":6.58e-14,"d":"6.58E-14"},"glycine-rich cell wall protein-like protein.","AT3G63350","AT-HSFA7B",66.914,4.1018,0.43499,9.4297,{"v":4.11e-21,"d":"4.11E-21"},{"v":8.06e-20,"d":"8.06E-20"},"winged-helix DNA-binding transcription factor family protein. member of Heat Stress Transcription Factor (Hsf) family","AT1G07480",null,609.89,0.70826,0.098385,7.1989,{"v":6.07e-13,"d":"6.07E-13"},{"v":1.16e-11,"d":"1.16E-11"},"Transcription factor IIA, alpha/beta subunit."]
["AT5G15780",null,1328.1,0.66348,0.09857,6.7311,1.68E-11,{"v":3.63e-10,"d":"3.63E-10"},"Pollen Ole e 1 allergen and extensin family protein.","AT2G33330","PDLP3",48.825,-2.498,0.34958,-7.1459,{"v":8.94e-13,"d":"8.94E-13"},{"v":1.87e-11,"d":"1.87E-11"},"full_name=plasmodesmata-located protein 3. plasmodesmata-located protein 3. Encodes a plasmodesmal protein that affects the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.","AT3G03650","EDA5",348.77,-1.3918,0.1766,-7.8809,3.25E-15,{"v":6.58e-14,"d":"6.58E-14"},"full_name=embryo sac development arrest 5. Exostosin family protein.","AT4G25100","FSD1",123.26,-2.0073,0.21314,-9.418,{"v":4.6E-21,"d":"4.60E-21"},{"v":9e-20,"d":"9.00E-20"},"full_name=Fe superoxide dismutase 1. Fe superoxide dismutase 1. Fe-superoxide dismutase","AT3G14130","HAOX1",1001.6,-0.58349,0.081059,-7.1983,{"v":6.1e-13,"d":"6.10E-13"},{"v":1.16e-11,"d":"1.16E-11"},"Aldolase-type TIM barrel family protein."]
["AT3G03790",null,2325.3,0.71896,0.10682,6.7306,{"v":1.69e-11,"d":"1.69E-11"},{"v":3.64e-10,"d":"3.64E-10"},"ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein.","AT4G34490","CAP1",427.51,-0.8929,0.12513,-7.1359,{"v":9.62e-13,"d":"9.62E-13"},2.01E-11,"full_name=cyclase associated protein 1. cyclase associated protein 1. CYCLASE ASSOCIATED PROTEIN","AT4G02930",null,304.43,1.1103,0.14091,7.879,{"v":3.3E-15,"d":"3.30E-15"},{"v":6.68e-14,"d":"6.68E-14"},"GTP binding Elongation factor Tu family protein.","AT2G40110",null,64.614,-3.8026,0.40387,-9.4153,{"v":4.72e-21,"d":"4.72E-21"},{"v":9.23e-20,"d":"9.23E-20"},"Yippee family putative zinc-binding protein.","AT1G04770","SDI2",246.58,-1.5519,0.21569,-7.1952,{"v":6.24e-13,"d":"6.24E-13"},{"v":1.19e-11,"d":"1.19E-11"},"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT1G77950","AGL67",2818,0.71649,0.10646,6.7303,{"v":1.69e-11,"d":"1.69E-11"},{"v":3.64e-10,"d":"3.64E-10"},"full_name=AGAMOUS-like 67. AGAMOUS-like 67.","AT5G02750","SGR9",211.54,1.1185,0.15675,7.1356,{"v":9.64e-13,"d":"9.64E-13"},2.01E-11,"full_name=SHOOT GRAVITROPISM 9. RING/U-box superfamily protein. Encodes an E3 ligase, SHOOT GRAVITROPISM9. Modulates the interaction between statoliths and F-Actin in gravity sensing.","AT1G70090","LGT8",347.37,-1.4586,0.1852,-7.876,{"v":3.38e-15,"d":"3.38E-15"},{"v":6.83e-14,"d":"6.83E-14"},"full_name=glucosyl transferase family 8. glucosyl transferase family 8. Encodes a protein with putative galacturonosyltransferase activity.","AT2G02130","LCR68",86.734,-2.5526,0.27144,-9.4041,{"v":5.25e-21,"d":"5.25E-21"},1.03E-19,"full_name=low-molecular-weight cysteine-rich 68. low-molecular-weight cysteine-rich 68. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","AT4G15563",null,317.07,-1.2479,0.17357,-7.1896,{"v":6.5e-13,"d":"6.50E-13"},1.24E-11,"F-box-like protein."]
["AT4G18480","CHLI1",272.9,-0.96529,0.14346,-6.7284,{"v":1.72e-11,"d":"1.72E-11"},{"v":3.69e-10,"d":"3.69E-10"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein. Encodes the CHLI subunit of magnesium chelatase which is required for chlorophyll biosynthesis. All four cysteine residues of the protein form two disulfide bonds (Cys102-Cys193 and Cys354-Cys396) under oxidized conditions but are fully reduced by reduction. It was suggested that the redox state of CHLI is regulated in vivo by the change of the redox environment in the chloroplasts probably via the Trx system.","AT1G12110","NRT1.1",573.49,0.86679,0.12162,7.1269,{"v":1.03e-12,"d":"1.03E-12"},{"v":2.14e-11,"d":"2.14E-11"},"full_name=nitrate transporter 1.1. nitrate transporter 1.1. Encodes NRT1.1 (CHL1), a dual-affinity nitrate transporter. The protein is expressed in guard cells and function in stomatal opening. Mutants have less transpiration and are more tolerant to drought. Expressed in lateral roots. Involved in nitrate signaling which enables the plant root system to detect and exploit nitrate-rich soil patches. Comparing to the wild type, the mutant displays a strongly decreased lateral root proliferation phenotype in nitrate rich patches on growth medium.","AT1G55690",null,388.44,-1.0193,0.12946,-7.8731,{"v":3.46e-15,"d":"3.46E-15"},{"v":6.98e-14,"d":"6.98E-14"},"Sec14p-like phosphatidylinositol transfer family protein.","AT2G38710",null,175.67,-1.7976,0.19124,-9.4,{"v":5.46e-21,"d":"5.46E-21"},1.06E-19,"AMMECR1 family.","AT1G11350","SD1-13",151.46,1.4179,0.19743,7.1817,6.88E-13,1.31E-11,"full_name=S-domain-1 13. S-domain-1 13."]
["AT1G44100","AAP5",421.82,1.031,0.15346,6.7186,{"v":1.84e-11,"d":"1.84E-11"},{"v":3.94e-10,"d":"3.94E-10"},"full_name=amino acid permease 5. amino acid permease 5. amino acid permease 5","AT5G03150","JKD",104,-1.6328,0.22911,-7.1268,{"v":1.03e-12,"d":"1.03E-12"},{"v":2.14e-11,"d":"2.14E-11"},"full_name=JACKDAW. C2H2-like zinc finger protein. JKD is a nuclear-localized putative transcription factor with three zinc finger domains. jkd mutants show a number of root patterning defects including ectopic periclinal divisions in the cortex, increased cell numbers in the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. jkd mutants also have a reduced number of meristematic cells in their roots. JKD can interact with the SCR and SHR proteins implicated in root patterning, as well as another zinc finger transcription factor, MAGPIE. All of these interactions require the first zinc finger in JKD according to a Y2H assay. There are also transcriptional interactions among these proteins. The initiation of JKD transcription does not appear to depend on SCR and SHR, but later expression in the post-embryonic QC cells and ground tissue initials is reduced in scr and shr mutants. JKD also appears to be required for SCR transcription beginning in the embryo. There is also some evidence that JKD plays a role in promoting the movement of SHR into the nucleus, particularly in QC cells, but this may be indirect.","AT1G69260","AFP1",334.82,1.4593,0.18542,7.8706,{"v":3.53e-15,"d":"3.53E-15"},{"v":7.12e-14,"d":"7.12E-14"},"full_name=ABI five binding protein. ABI five binding protein.","AT5G13820","TBP1",99.563,-3.13,0.33308,-9.3974,{"v":5.59e-21,"d":"5.59E-21"},{"v":1.09e-19,"d":"1.09E-19"},"full_name=telomeric DNA binding protein 1. telomeric DNA binding protein 1. Encodes a protein that specifically binds plant telomeric DNA repeats. It has a single Myb telomeric DNA-binding domain in C-terminus that prefers the sequence TTTAGGG.","AT1G47200","WPP2",285.04,-1.0461,0.1457,-7.1798,{"v":6.98e-13,"d":"6.98E-13"},1.33E-11,"full_name=WPP domain protein 2. WPP domain protein 2. WPP family members contains an NE targeting domain. This domain, called the WPP domain after a highly conserved Trp-Pro-Pro motif, is necessary for NE targeting of WPP1. RNAi suppression of WPP2 resulted in reduced mitotic activity."]
["AT4G18250",null,30.847,-3.0674,0.45701,-6.7118,{"v":1.92e-11,"d":"1.92E-11"},{"v":4.12e-10,"d":"4.12E-10"},"receptor Serine/Threonine kinase-like protein.","AT1G03457","BRN2",169.5,-1.3212,0.1854,-7.126,{"v":1.03e-12,"d":"1.03E-12"},2.15E-11,"RNA-binding (RRM/RBD/RNP motifs) family protein.","AT5G07530","GRP17",178.33,-2.3393,0.29761,-7.8603,{"v":3.83e-15,"d":"3.83E-15"},{"v":7.72e-14,"d":"7.72E-14"},"full_name=glycine rich protein 17. glycine rich protein 17. encodes a glycine-rich protein that has oleosin domain and is expressed specifically during flower stages 10 to 12. Protein is found on mature pollen coat.","AT4G16690","MES16",65.185,-3.2066,0.34146,-9.3909,{"v":5.95e-21,"d":"5.95E-21"},1.16E-19,"full_name=methyl esterase 16. methyl esterase 16. Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on MeSA, MeGA4, or MEGA9 in vitro. Although MES16 is similar to MES17, a MeIAA hydrolase, two mes16 mutant lines (SALK_151578) and (SALK_139756) do not show altered sensitivity to MeIAA in root growth assays. MES16 transcripts appear to be more than 10-fold less abundant than those of MES17 in roots.","AT1G78070",null,4281.4,-0.50015,0.069669,-7.179,{"v":7.02e-13,"d":"7.02E-13"},1.33E-11,"Transducin/WD40 repeat-like superfamily protein."]
["AT1G12000",null,1085.1,-0.88566,0.1321,-6.7044,{"v":2.02e-11,"d":"2.02E-11"},4.33E-10,"Phosphofructokinase family protein.","AT5G40370","GRXC2",618.57,0.78115,0.10964,7.1247,1.04E-12,{"v":2.16e-11,"d":"2.16E-11"},"full_name=glutaredoxin C2. Glutaredoxin family protein.","AT3G29200","CM1",523.1,-0.98441,0.12524,-7.8599,{"v":3.84e-15,"d":"3.84E-15"},{"v":7.73e-14,"d":"7.73E-14"},"full_name=chorismate mutase 1. chorismate mutase 1. L-ascorbate peroxidase","AT3G05020","ACP1",61.961,-4.2406,0.45201,-9.3817,6.49E-21,{"v":1.26e-19,"d":"1.26E-19"},"full_name=acyl carrier protein 1. acyl carrier protein 1. encodes an acyl carrier protein expressed in leaves, roots, and dry seeds. Protein is not regulated by light.","AT1G20980","SPL14",867.62,0.6257,0.087188,7.1765,{"v":7.15e-13,"d":"7.15E-13"},1.36E-11,"full_name=squamosa promoter binding protein-like 14. squamosa promoter binding protein-like 14. Encodes a nuclear plant-specific protein with features characteristic of a transcriptional regulator, including a nuclear localization signal sequence, a plant-specific DNA binding domain (the SBP box), and a protein interaction motif (ankyrin repeats). It unctions as a transcriptional regulator that plays a role not only in sensitivity to FB1, but also in the development of normal plant architecture."]
["AT4G30130",null,34.489,-3.014,0.44982,-6.7004,{"v":2.08e-11,"d":"2.08E-11"},{"v":4.45e-10,"d":"4.45E-10"},"DUF630 family protein (DUF630 and DUF632).","AT3G23780","NRPD2A",133.28,-1.4138,0.19844,-7.1243,1.05E-12,2.17E-11,"full_name=nuclear RNA polymerase D2A. nuclear RNA polymerase D2A. This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin.","AT4G20170","GALS3",602.91,0.97143,0.12362,7.8583,{"v":3.89e-15,"d":"3.89E-15"},{"v":7.82e-14,"d":"7.82E-14"},"full_name=galactan synthase 3. glycosyltransferase family protein (DUF23).","AT1G80920","J8",1574.1,1.6129,0.17203,9.3756,{"v":6.88e-21,"d":"6.88E-21"},{"v":1.34e-19,"d":"1.34E-19"},"Chaperone DnaJ-domain superfamily protein. A nuclear encoded soluble protein found in the chloroplast stroma. Negatively regulated by light and has rapid turnover in darkness.","AT1G07590",null,303.17,-1.6194,0.22567,-7.1761,{"v":7.17e-13,"d":"7.17E-13"},1.36E-11,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT1G19000",null,1752.8,0.66067,0.098634,6.6981,2.11E-11,{"v":4.51e-10,"d":"4.51E-10"},"Homeodomain-like superfamily protein.","AT1G79520",null,125.88,1.5034,0.21126,7.1165,{"v":1.11e-12,"d":"1.11E-12"},2.29E-11,"Cation efflux family protein.","AT2G42280","FBH4",131.39,1.6052,0.20436,7.855,{"v":4e-15,"d":"4.00E-15"},{"v":8.02e-14,"d":"8.02E-14"},"full_name=FLOWERING BHLH 4. basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT2G31570","GPX2",75.475,-2.7884,0.29741,-9.3754,{"v":6.89e-21,"d":"6.89E-21"},{"v":1.34e-19,"d":"1.34E-19"},"full_name=glutathione peroxidase 2. glutathione peroxidase 2. glutathione peroxidase GPx","ATMG01090","ORF262",34.297,3.9713,0.5541,7.167,{"v":7.67e-13,"d":"7.67E-13"},1.45E-11,"ATP synthase 9 mitochondrial;(source:Araport11)"]
["AT1G69800",null,743.09,1.0406,0.15543,6.6952,2.15E-11,{"v":4.6e-10,"d":"4.60E-10"},"Cystathionine beta-synthase (CBS) protein.","AT1G69260","AFP1",142.84,1.466,0.20602,7.1156,{"v":1.11e-12,"d":"1.11E-12"},{"v":2.3e-11,"d":"2.30E-11"},"full_name=ABI five binding protein. ABI five binding protein.","AT3G09820","ADK1",194.32,-2.1636,0.2755,-7.8532,{"v":4.06e-15,"d":"4.06E-15"},{"v":8.13e-14,"d":"8.13E-14"},null,"AT4G19230","CYP707A1",68.881,-3.1684,0.3381,-9.3713,{"v":7.16e-21,"d":"7.16E-21"},{"v":1.39e-19,"d":"1.39E-19"},"full_name=cytochrome P450, family 707, subfamily A, polypeptide 1. cytochrome P450, family 707, subfamily A, polypeptide 1. Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.","AT1G22530","PATL2",222.1,1.0969,0.15326,7.1573,{"v":8.23e-13,"d":"8.23E-13"},{"v":1.55e-11,"d":"1.55E-11"},"full_name=PATELLIN 2. PATELLIN 2."]
["AT1G79470",null,126.06,-1.348,0.20142,-6.6926,2.19E-11,{"v":4.67e-10,"d":"4.67E-10"},"Aldolase-type TIM barrel family protein.","AT2G45070","SEC61 BETA",788.99,-0.83462,0.11739,-7.11,{"v":1.16e-12,"d":"1.16E-12"},{"v":2.4e-11,"d":"2.40E-11"},"full_name=SUPPRESSORS OF SECRETION-DEFECTIVE 61 BETA. Preprotein translocase Sec, Sec61-beta subunit protein. Sec61 Beta Subunit","AT1G03120","RAB28",519.37,0.98614,0.12559,7.8523,4.08E-15,{"v":8.18e-14,"d":"8.18E-14"},"full_name=responsive to abscisic acid 28. responsive to abscisic acid 28. Atrab28 plays a role in the ion cell balance during late embryogenesis and germination.","AT4G27420","ABCG9",49.495,-5.0169,0.53536,-9.3712,{"v":7.17e-21,"d":"7.17E-21"},{"v":1.39e-19,"d":"1.39E-19"},"full_name=ATP-binding cassette G9. ABC-2 type transporter family protein.","AT1G22400","UGT85A1",114.93,1.8802,0.26278,7.1551,{"v":8.36e-13,"d":"8.36E-13"},1.58E-11,"UDP-Glycosyltransferase superfamily protein."]
["AT5G65700","BAM1",694.24,-1.0089,0.15077,-6.6916,2.21E-11,{"v":4.7e-10,"d":"4.70E-10"},"full_name=BARELY ANY MERISTEM 1. Leucine-rich receptor-like protein kinase family protein. Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.","AT1G72030",null,66.846,-1.949,0.27413,-7.1098,{"v":1.16e-12,"d":"1.16E-12"},{"v":2.4e-11,"d":"2.40E-11"},"Acyl-CoA N-acyltransferases (NAT) superfamily protein.","AT5G01800",null,414.83,-1.2016,0.15318,-7.8447,{"v":4.34e-15,"d":"4.34E-15"},{"v":8.68e-14,"d":"8.68E-14"},"saposin B domain-containing protein.","AT5G45280","PAE11",159.65,-1.736,0.18527,-9.3703,{"v":7.23e-21,"d":"7.23E-21"},{"v":1.4E-19,"d":"1.40E-19"},"Pectinacetylesterase family protein.","AT2G38380",null,40.96,-4.6315,0.64738,-7.1542,{"v":8.42e-13,"d":"8.42E-13"},{"v":1.59e-11,"d":"1.59E-11"},"Peroxidase superfamily protein."]
["AT1G70680",null,1554.5,1.219,0.18225,6.6889,2.25E-11,4.78E-10,"Caleosin-related family protein.","AT2G25737",null,767.8,-0.80422,0.11312,-7.1096,{"v":1.16e-12,"d":"1.16E-12"},{"v":2.4e-11,"d":"2.40E-11"},"Sulfite exporter TauE/SafE family protein.","AT4G31340",null,419.45,-1.0718,0.13665,-7.8432,{"v":4.39e-15,"d":"4.39E-15"},{"v":8.78e-14,"d":"8.78E-14"},"myosin heavy chain-like protein.","AT4G27150","SESA2",46254,-4.6145,0.49305,-9.3592,{"v":8.04e-21,"d":"8.04E-21"},{"v":1.55e-19,"d":"1.55E-19"},"full_name=seed storage albumin 2. seed storage albumin 2.","AT2G17020",null,207.79,1.1396,0.15932,7.1526,8.52E-13,{"v":1.6E-11,"d":"1.60E-11"},"F-box/RNI-like superfamily protein."]
["AT2G03340","WRKY3",253.45,1.0023,0.14995,6.6843,{"v":2.32e-11,"d":"2.32E-11"},{"v":4.93e-10,"d":"4.93E-10"},"full_name=WRKY DNA-binding protein 3. WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3).","AT5G21930","PAA2",116.71,-1.6269,0.22895,-7.1058,{"v":1.2e-12,"d":"1.20E-12"},{"v":2.46e-11,"d":"2.46E-11"},"full_name=P-type ATPase of Arabidopsis 2. P-type ATPase of Arabidopsis 2. P-Type ATPase, mediates copper transport to chloroplast thylakoid lumen. Required for accumulation of copper-containing plastocyanin in the thylakoid lumen and for effective photosynthetic electron transport","AT2G40220","ABI4",62.5,-2.7327,0.34878,-7.835,{"v":4.69e-15,"d":"4.69E-15"},{"v":9.35e-14,"d":"9.35E-14"},"full_name=ABA INSENSITIVE 4. Integrase-type DNA-binding superfamily protein. Encodes a member of the DREB subfamily A-3 of ERF/AP2 transcription factor family (ABI4). The protein contains one AP2 domain. There is only one member in this family. Involved in abscisic acid (ABA) signal transduction, ABA-mediated glucose response, and hexokinase-dependent sugar responses. Acts downstream of GUN1 in retrograde signaling. Expressed most abundantly in developing siliques and to a lesser degree in seedlings.","AT4G19880",null,250.94,1.5272,0.16318,9.3591,{"v":8.04e-21,"d":"8.04E-21"},{"v":1.55e-19,"d":"1.55E-19"},"Glutathione S-transferase family protein.","AT5G41350",null,922.56,-0.69334,0.096946,-7.1519,{"v":8.56e-13,"d":"8.56E-13"},{"v":1.61e-11,"d":"1.61E-11"},"RING/U-box superfamily protein."]
["AT5G59320","LTP3",161.61,-1.3146,0.19677,-6.6808,{"v":2.38e-11,"d":"2.38E-11"},{"v":5.04e-10,"d":"5.04E-10"},"full_name=lipid transfer protein 3. lipid transfer protein 3. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.","AT1G32560","AtLEA4-1",3198.8,0.81263,0.11441,7.1029,{"v":1.22e-12,"d":"1.22E-12"},{"v":2.51e-11,"d":"2.51E-11"},"full_name=Late Embryogenesis Abundant 4-1. Late embryogenesis abundant protein, group 1 protein. Encodes LEA4-1, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment.","AT5G57800","CER3",600.85,-1.2335,0.15746,-7.8336,{"v":4.74e-15,"d":"4.74E-15"},{"v":9.44e-14,"d":"9.44E-14"},"full_name=ECERIFERUM 3. Fatty acid hydroxylase superfamily. encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis.","AT2G18570",null,3244.7,-0.75195,0.080411,-9.3514,{"v":8.65e-21,"d":"8.65E-21"},{"v":1.67e-19,"d":"1.67E-19"},"UDP-Glycosyltransferase superfamily protein.","AT3G52850","VSR1",2843.7,-0.44627,0.062436,-7.1475,{"v":8.84e-13,"d":"8.84E-13"},1.66E-11,"full_name=vacuolar sorting receptor homolog 1. vacuolar sorting receptor homolog 1. Encodes the Vacuolar Sorting Receptor-1 (VSR-1)/Epidermal Growth Factor Receptor-like protein1(VSR-1/ATELP1). Binds vacuolar targeting signals. Involved in sorting seed storage proteins into vacuoles."]
["AT1G74410","ATL24",231.26,1.1527,0.17261,6.6782,{"v":2.42e-11,"d":"2.42E-11"},{"v":5.12e-10,"d":"5.12E-10"},"RING/U-box superfamily protein.","AT5G11420",null,28.385,3.7973,0.53489,7.0991,{"v":1.26e-12,"d":"1.26E-12"},{"v":2.58e-11,"d":"2.58E-11"},"transmembrane protein, putative (Protein of unknown function, DUF642).","AT2G02710","PLPB",701.51,1.3954,0.17821,7.8301,{"v":4.87e-15,"d":"4.87E-15"},{"v":9.7e-14,"d":"9.70E-14"},"full_name=PAS/LOV protein B. PAS/LOV protein B. Encodes a putative blue light receptor protein.","AT1G29900","CARB",745.53,0.98495,0.10536,9.3488,{"v":8.86e-21,"d":"8.86E-21"},{"v":1.7e-19,"d":"1.70E-19"},"full_name=carbamoyl phosphate synthetase B. carbamoyl phosphate synthetase B. Encodes carbamoyl phosphate synthetase (CPS) large subunit (CARB), also named as VEN3. Heterologous expression of the Arabidopsis VEN3 and VEN6 genes in a CPS-deficient Escherichia coli strain fully restored bacterial growth in minimal medium, demonstrating the enzymatic activity of the VEN3 and VEN6 proteins.","AT3G10130","SOUL4",829.86,-0.65196,0.091302,-7.1407,{"v":9.29e-13,"d":"9.29E-13"},{"v":1.74e-11,"d":"1.74E-11"},"SOUL heme-binding family protein."]
["AT4G19670",null,298.88,-0.99068,0.14835,-6.6779,{"v":2.42e-11,"d":"2.42E-11"},{"v":5.13e-10,"d":"5.13E-10"},"RING/U-box superfamily protein.","AT1G31070","GlcNAc1pUT1",277.77,-1.0371,0.14625,-7.091,1.33E-12,{"v":2.73e-11,"d":"2.73E-11"},"full_name=N-acetylglucosamine-1-phosphate uridylyltransferase 1. N-acetylglucosamine-1-phosphate uridylyltransferase 1. Encodes a protein that functions as an N-acetylglucosamine-1-phosphate uridylyltransferase that catalyzes the formation of UDP-N-acetylglucosamine (UDP-GlcNAc). This is an essential precursor for glycolipid and glycoprotein synthesis and is also used for regulatory protein modification in signaling pathways. The enzyme can also catalyze the reverse reaction using both UDP-GlcNAc and the less common UDP-N-acetylgalactosamine as substrates.","AT1G66460",null,208.53,-1.4947,0.1909,-7.8295,{"v":4.9e-15,"d":"4.90E-15"},{"v":9.74e-14,"d":"9.74E-14"},"Protein kinase superfamily protein.","AT5G44380","AtBBE24",318.37,-1.2569,0.13445,-9.3488,{"v":8.87e-21,"d":"8.87E-21"},{"v":1.7e-19,"d":"1.70E-19"},"FAD-binding Berberine family protein.","AT3G08530","CHC2",1567.8,0.52397,0.073384,7.1401,{"v":9.33e-13,"d":"9.33E-13"},{"v":1.75e-11,"d":"1.75E-11"},"Clathrin, heavy chain."]
["AT3G56370","IRK",248.33,-1.3185,0.19777,-6.667,{"v":2.61e-11,"d":"2.61E-11"},{"v":5.52e-10,"d":"5.52E-10"},"Leucine-rich repeat protein kinase family protein.","AT2G34020",null,33.094,-3.2897,0.46406,-7.0888,{"v":1.35e-12,"d":"1.35E-12"},{"v":2.77e-11,"d":"2.77E-11"},"Calcium-binding EF-hand family protein.","AT1G44800","SIAR1",662.68,-1.5251,0.19507,-7.8183,{"v":5.35e-15,"d":"5.35E-15"},1.06E-13,"full_name=Siliques Are Red 1. nodulin MtN21 /EamA-like transporter family protein. Encodes Siliques Are Red 1 (SIAR1). Functions as a bidirectional amino acid transporter that is crucial for the amino acid homeostasis of siliques. Member of nodulin MtN21-like transporter family.","AT4G36670","PMT6",144.27,2.978,0.31868,9.3448,{"v":9.21e-21,"d":"9.21E-21"},1.77E-19,"full_name=polyol/monosaccharide transporter 6. Major facilitator superfamily protein.","AT1G70840","MLP31",13120,-0.60859,0.085279,-7.1364,{"v":9.58e-13,"d":"9.58E-13"},{"v":1.79e-11,"d":"1.79E-11"},"full_name=MLP-like protein 31. MLP-like protein 31."]
["AT4G09670",null,488.48,-0.82418,0.12373,-6.661,2.72E-11,{"v":5.74e-10,"d":"5.74E-10"},"Oxidoreductase family protein.","AT3G51600","LTP5",41.297,-2.6971,0.38059,-7.0865,1.38E-12,{"v":2.81e-11,"d":"2.81E-11"},"full_name=lipid transfer protein 5. lipid transfer protein 5. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.","AT3G30842","ABCG38",214.96,-1.3273,0.16998,-7.8089,{"v":5.77e-15,"d":"5.77E-15"},{"v":1.14e-13,"d":"1.14E-13"},"full_name=ATP-binding cassette G38. pleiotropic drug resistance 10.","AT4G10850","SWEET7",258.63,-2.9308,0.31374,-9.3416,{"v":9.49e-21,"d":"9.49E-21"},1.82E-19,"Nodulin MtN3 family protein.","AT5G24810","ABC1K11",341.03,-0.91374,0.12824,-7.125,1.04E-12,{"v":1.94e-11,"d":"1.94E-11"},"ABC1 family protein."]
["AT1G26400","ATBBE5",43.387,7.0878,1.0647,6.6572,{"v":2.79e-11,"d":"2.79E-11"},{"v":5.89e-10,"d":"5.89E-10"},"FAD-binding Berberine family protein.","AT3G55360","CER10",502.91,-0.87169,0.12306,-7.0835,{"v":1.41e-12,"d":"1.41E-12"},{"v":2.87e-11,"d":"2.87E-11"},"full_name=ECERIFERUM 10. 3-oxo-5-alpha-steroid 4-dehydrogenase family protein. Enoyl-CoA reductase is involved in all very long chain fatty acids (VLCFA) elongation reactions that are required for cuticular wax, storage lipid and sphingolipid metabolism. The protein is located in the ER, but in contrast to its yeast homolog TSC13 is not particularly enriched in the nuclear envelope-vacuole junction. Mutants in this gene show abnormal organ morphology and stem glossiness. Cells in all tissues are only about 1/3 of the size of wild type cells. The morphological changes are most likely to result from the reduction in the VLCFA content of sphingolipids. Mutants also show abnormalities in the endocytic membrane organization and transport.","AT2G38465",null,692.02,1.0254,0.13133,7.8078,{"v":5.82e-15,"d":"5.82E-15"},{"v":1.15e-13,"d":"1.15E-13"},"hypothetical protein.","AT3G51860","CAX3",2562.6,-0.72768,0.077935,-9.3369,{"v":9.92e-21,"d":"9.92E-21"},{"v":1.9E-19,"d":"1.90E-19"},"full_name=cation exchanger 3. cation exchanger 3.","AT1G66080","HLP1",125.84,-1.3884,0.19503,-7.1186,1.09E-12,2.03E-11,"hikeshi-like protein."]
["AT1G28290","AGP31",53.017,-2.3064,0.34655,-6.6555,2.82E-11,{"v":5.95e-10,"d":"5.95E-10"},"full_name=arabinogalactan protein 31. arabinogalactan protein 31. Encodes an atypical arabinogalactan protein that is localized to the plasma membrange. AGP31 is highly expressed in flowers and vascular tissue and is repressed by jasmonic acid. AGP31 may play a role in vascular tissue function during defense and development.","AT1G01720","ATAF1",1741.4,0.64134,0.090612,7.0779,1.46E-12,{"v":2.99e-11,"d":"2.99E-11"},"NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA.","AT5G57480",null,117.79,1.6516,0.21168,7.8021,6.09E-15,{"v":1.21e-13,"d":"1.21E-13"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT5G65760",null,144.86,1.8423,0.19752,9.3273,{"v":1.09e-20,"d":"1.09E-20"},2.08E-19,"Serine carboxypeptidase S28 family protein.","AT5G55290","VHA-E1",203.43,-1.1405,0.16021,-7.1185,1.09E-12,2.03E-11,"ATPase, V0 complex, subunit E."]
["AT3G17120",null,271.99,1.014,0.15243,6.6523,2.88E-11,{"v":6.07e-10,"d":"6.07E-10"},"transmembrane protein.","AT4G34710","ADC2",625.93,0.90984,0.12859,7.0758,{"v":1.49e-12,"d":"1.49E-12"},{"v":3.03e-11,"d":"3.03E-11"},"full_name=arginine decarboxylase 2. arginine decarboxylase 2. encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. ADC2 is stress-inducible (osmotic stress). Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Overexpression causes phenotypes similar to GA-deficient plants and these plants show reduced levels of GA due to lower expression levels of AtGA20ox1, AtGA3ox3 and AtGA3ox1.","AT4G27170","SESA4",80695,-1.5315,0.1965,-7.7938,{"v":6.5e-15,"d":"6.50E-15"},{"v":1.29e-13,"d":"1.29E-13"},"full_name=seed storage albumin 4. seed storage albumin 4.","AT5G13550","SULTR4;1",48.705,-3.8717,0.41527,-9.3233,1.13E-20,{"v":2.15e-19,"d":"2.15E-19"},"full_name=sulfate transporter 4.1. sulfate transporter 4.1. Encodes a sulfate transporter.","AT5G24660","LSU2",66.514,-2.6723,0.37549,-7.1169,{"v":1.1E-12,"d":"1.10E-12"},{"v":2.06e-11,"d":"2.06E-11"},"full_name=RESPONSE TO LOW SULFUR 2. response to low sulfur 2."]
["AT2G36640","ECP63",3399.5,0.95467,0.14354,6.6507,2.92E-11,{"v":6.13e-10,"d":"6.13E-10"},"full_name=embryonic cell protein 63. embryonic cell protein 63. Encodes putative phosphotyrosine protein belonging to late embryogenesis abundant (LEA) protein in group 3 that might be involved in maturation and desiccation tolerance of seeds. RFLP and CAPS mapping place it on chromosome 4 but the nucleotide sequence maps it to chromosome 2.","AT3G14000","ATBRXL2",189.11,-1.1938,0.16877,-7.0737,1.51E-12,{"v":3.07e-11,"d":"3.07E-11"},"DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein. Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.","AT5G66730","IDD1",1290.7,0.81497,0.10459,7.7921,{"v":6.59e-15,"d":"6.59E-15"},{"v":1.3E-13,"d":"1.30E-13"},"full_name=INDETERMINATE DOMAIN 1. C2H2-like zinc finger protein.","AT3G21240","4CL2",57.48,-5.5852,0.59912,-9.3222,{"v":1.14e-20,"d":"1.14E-20"},{"v":2.17e-19,"d":"2.17E-19"},"full_name=4-coumarate:CoA ligase 2. 4-coumarate:CoA ligase 2. encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate.","AT3G62830","AUD1",644.3,-0.69073,0.097076,-7.1153,{"v":1.12e-12,"d":"1.12E-12"},{"v":2.08e-11,"d":"2.08E-11"},"NAD(P)-binding Rossmann-fold superfamily protein. encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be membrane-bound by PSORT. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes."]
["AT2G02850","ARPN",105.93,1.4711,0.2212,6.6506,2.92E-11,{"v":6.13e-10,"d":"6.13E-10"},"full_name=plantacyanin. plantacyanin. Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.","AT2G19590","ACO1",79.462,-1.7762,0.25121,-7.0706,{"v":1.54e-12,"d":"1.54E-12"},{"v":3.14e-11,"d":"3.14E-11"},"full_name=ACC oxidase 1. ACC oxidase 1. encodes a protein whose sequence is similar to 1-aminocyclopropane-1-carboxylate oxidase","AT1G72150","PATL1",726.79,-1.6192,0.2078,-7.7919,{"v":6.6E-15,"d":"6.60E-15"},{"v":1.3E-13,"d":"1.30E-13"},"full_name=PATELLIN 1. PATELLIN 1. novel cell-plate-associated protein that is related in sequence to proteins involved in membrane trafficking in other eukaryotes","AT4G23010","UTR2",180.54,-1.7707,0.19003,-9.3181,{"v":1.18e-20,"d":"1.18E-20"},{"v":2.26e-19,"d":"2.26E-19"},"full_name=UDP-galactose transporter 2. UDP-galactose transporter 2.","AT1G75140",null,205.44,1.1023,0.15512,7.1063,1.19E-12,2.21E-11,"membrane protein."]
["AT4G20430",null,292.52,-1.0963,0.16493,-6.6472,{"v":2.99e-11,"d":"2.99E-11"},{"v":6.26e-10,"d":"6.26E-10"},"Subtilase family protein.","AT1G02816",null,796.64,0.88145,0.12467,7.0704,{"v":1.55e-12,"d":"1.55E-12"},{"v":3.14e-11,"d":"3.14E-11"},"pectinesterase (Protein of unknown function, DUF538).","AT3G53380","LECRK-VIII.1",45.709,-3.2088,0.41206,-7.7873,{"v":6.84e-15,"d":"6.84E-15"},{"v":1.35e-13,"d":"1.35E-13"},"Concanavalin A-like lectin protein kinase family protein.","AT4G36920","AP2",53.414,-5.2738,0.566,-9.3177,{"v":1.19e-20,"d":"1.19E-20"},{"v":2.26e-19,"d":"2.26E-19"},"full_name=APETALA 2. Integrase-type DNA-binding superfamily protein. Encodes a floral homeotic gene, a member of the AP2/EREBP (ethylene responsive element binding protein) class of transcription factors and is involved in the specification of floral organ identity, establishment of floral meristem identity, suppression of floral meristem indeterminancy, and development of the ovule and seed coat. AP2 also has a role in controlling seed mass. Dominant negative allele I28, revealed a function in meristem maintenance-mutant meristems are smaller than normal siblings. AP2 appears to act on the WUS-CLV pathway in an AG independent manner.","AT4G31420","REIL1",670.64,0.6927,0.097506,7.1042,{"v":1.21e-12,"d":"1.21E-12"},2.25E-11,"Zinc finger protein 622."]
["AT5G05020",null,81.414,-1.7389,0.26177,-6.6427,3.08E-11,{"v":6.45e-10,"d":"6.45E-10"},"Pollen Ole e 1 allergen and extensin family protein.","AT1G05510","OBAP1A",28940,0.64782,0.091674,7.0666,{"v":1.59e-12,"d":"1.59E-12"},{"v":3.22e-11,"d":"3.22E-11"},"naphthalene 1,2-dioxygenase subunit alpha (DUF1264). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT5G21150","AGO9",280.1,-1.229,0.158,-7.7784,{"v":7.35e-15,"d":"7.35E-15"},{"v":1.45e-13,"d":"1.45E-13"},"full_name=ARGONAUTE 9. Argonaute family protein. AGO9-dependent sRNA silencing is crucial to specify cell fate in the Arabidopsis ovule. AGO9 is expressed in reproductive companion cells but not in the associated male or female gametes or their precursors. Therefore, AGO9 acts non-cell autonomously to silencing the activity of TEs activity in the female gametophyte.","AT2G28470","BGAL8",160.29,-1.6901,0.18143,-9.3152,1.22E-20,{"v":2.31e-19,"d":"2.31E-19"},"full_name=beta-galactosidase 8. beta-galactosidase 8. putative beta-galactosidase (BGAL8 gene)","AT2G42810","PP5.2",552.24,0.71307,0.10038,7.1036,{"v":1.22e-12,"d":"1.22E-12"},2.25E-11,"full_name=protein phosphatase 5.2. protein phosphatase 5.2. Encodes a phytochrome-specific type 5 serine/threonine protein phosphatase. It dephosphorylates active Pfr-phytochromes. Controls light signal flux by enhancing phytochrome stability and affinity for a signal transducer. It localizes to the cytoplasm in darkness and in the nucleus in light. The gene is alternately spliced. This variant does not contain membrane domains."]
["AT4G34920",null,116.8,1.6531,0.249,6.639,{"v":3.16e-11,"d":"3.16E-11"},{"v":6.61e-10,"d":"6.61E-10"},"PLC-like phosphodiesterases superfamily protein.","AT3G06510","SFR2",384.09,-0.93944,0.13303,-7.0619,{"v":1.64e-12,"d":"1.64E-12"},{"v":3.33e-11,"d":"3.33E-11"},"full_name=SENSITIVE TO FREEZING 2. Glycosyl hydrolase superfamily protein. Encodes a protein with beta-glucosidase and galactosyltransferase activity, mutants show increased sensitivity to freezing. Though it is classified as a family I glycosyl hydrolase, it has no hydrolase activity in vitro.","AT1G73220","2024-10-01",1119.4,-1.3794,0.17737,-7.7769,{"v":7.43e-15,"d":"7.43E-15"},{"v":1.46e-13,"d":"1.46E-13"},"full_name=organic cation/carnitine transporter1. organic cation/carnitine transporter1.","AT5G24530","DMR6",300.71,-1.3392,0.14378,-9.3144,{"v":1.23e-20,"d":"1.23E-20"},{"v":2.33e-19,"d":"2.33E-19"},"full_name=DOWNY MILDEW RESISTANT 6. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.","AT3G25910","SIZ1",2253.1,0.47629,0.067048,7.1036,{"v":1.22e-12,"d":"1.22E-12"},2.25E-11,"MAP kinase kinase kinase, putative (DUF1644)."]
["AT2G16760",null,166.2,-1.2608,0.18994,-6.6379,{"v":3.18e-11,"d":"3.18E-11"},{"v":6.65e-10,"d":"6.65E-10"},"Calcium-dependent phosphotriesterase superfamily protein.","AT2G22170","PLAT2",281.07,-1.4169,0.20079,-7.0566,1.71E-12,{"v":3.45e-11,"d":"3.45E-11"},"full_name=PLAT domain protein 2. Lipase/lipooxygenase, PLAT/LH2 family protein.","AT2G36640","ECP63",6590.6,0.74228,0.095608,7.7637,{"v":8.25e-15,"d":"8.25E-15"},{"v":1.62e-13,"d":"1.62E-13"},"full_name=embryonic cell protein 63. embryonic cell protein 63. Encodes putative phosphotyrosine protein belonging to late embryogenesis abundant (LEA) protein in group 3 that might be involved in maturation and desiccation tolerance of seeds. RFLP and CAPS mapping place it on chromosome 4 but the nucleotide sequence maps it to chromosome 2.","AT5G42100","BG_PPAP",124.58,-2.6089,0.28018,-9.3114,1.26E-20,{"v":2.39e-19,"d":"2.39E-19"},"full_name=beta-1,3-glucanase_putative. beta-1,3-glucanase. encodes a plasmodesmal (Pd)-associated membrane protein involved in plasmodesmal callose degradation, i.e. beta-1,3-glucanase (EC 3.2.1.39), and functions in the gating of Pd","AT5G38830",null,342.69,0.85964,0.12106,7.1008,1.24E-12,2.29E-11,"Cysteinyl-tRNA synthetase, class Ia family protein."]
["AT1G28110","SCPL45",103.43,-1.8938,0.28545,-6.6346,{"v":3.25e-11,"d":"3.25E-11"},{"v":6.79e-10,"d":"6.79E-10"},"full_name=serine carboxypeptidase-like 45. serine carboxypeptidase-like 45.","AT2G34680","AIR9",191.37,-3.855,0.54631,-7.0564,1.71E-12,{"v":3.46e-11,"d":"3.46E-11"},"full_name=AUXIN-INDUCED IN ROOT CULTURES 9. Outer arm dynein light chain 1 protein. isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular.","AT1G51090","ATHMAD1",192.6,1.3616,0.17539,7.7635,{"v":8.26e-15,"d":"8.26E-15"},{"v":1.62e-13,"d":"1.62E-13"},"Heavy metal transport/detoxification superfamily protein.","AT1G28400",null,91.057,-7.2575,0.77956,-9.3097,{"v":1.28e-20,"d":"1.28E-20"},{"v":2.43e-19,"d":"2.43E-19"},"GATA zinc finger protein.","AT5G51300","ATSF1",668.59,-0.67077,0.09456,-7.0936,{"v":1.31e-12,"d":"1.31E-12"},{"v":2.41e-11,"d":"2.41E-11"},"splicing factor-like protein. Encodes a nuclear localized splicing factor homolog that is involved in alternative splicing of some mRNAs."]
["AT5G53880",null,40.491,-2.6924,0.40589,-6.6334,{"v":3.28e-11,"d":"3.28E-11"},{"v":6.84e-10,"d":"6.84E-10"},"hypothetical protein.","AT3G15990","SULTR3;4",382.86,-0.95442,0.13549,-7.044,{"v":1.87e-12,"d":"1.87E-12"},{"v":3.77e-11,"d":"3.77E-11"},"full_name=sulfate transporter 3;4. sulfate transporter 3;4. Encodes sulfate transporter Sultr3;4.","AT1G16770",null,2340.5,0.82921,0.10689,7.7574,{"v":8.67e-15,"d":"8.67E-15"},{"v":1.7e-13,"d":"1.70E-13"},"hypothetical protein.","AT1G12845",null,56.777,-5.23,0.56195,-9.3069,1.32E-20,{"v":2.49e-19,"d":"2.49E-19"},"transmembrane protein.","AT5G59613",null,598.8,-0.78973,0.11134,-7.0931,{"v":1.31e-12,"d":"1.31E-12"},{"v":2.42e-11,"d":"2.42E-11"},"ATP synthase."]
["AT3G48000","ALDH2B4",1766.7,-0.57603,0.086935,-6.626,{"v":3.45e-11,"d":"3.45E-11"},7.18E-10,"full_name=aldehyde dehydrogenase 2B4. aldehyde dehydrogenase 2B4. Encodes a putative (NAD+) aldehyde dehydrogenase.","AT3G18370","ATSYTF",452.32,0.93174,0.13241,7.037,{"v":1.96e-12,"d":"1.96E-12"},{"v":3.96e-11,"d":"3.96E-11"},"C2 domain-containing protein.","AT1G02870",null,163.36,1.5811,0.20383,7.757,{"v":8.69e-15,"d":"8.69E-15"},{"v":1.7e-13,"d":"1.70E-13"},"nucleolar-like protein.","AT2G02870",null,146.9,-1.9809,0.21299,-9.3003,{"v":1.4e-20,"d":"1.40E-20"},{"v":2.65e-19,"d":"2.65E-19"},"Galactose oxidase/kelch repeat superfamily protein.","AT2G30800","HVT1",908.39,0.60339,0.085089,7.0913,1.33E-12,{"v":2.45e-11,"d":"2.45E-11"},"full_name=helicase in vascular tissue and tapetum. helicase in vascular tissue and tapetum. Has RNA or DNA helicase activity and expressed specifically in tapetum and vascular tissue. First identified member of a new group of the mle helicase group of the DEAH family."]
["AT2G37670",null,85.43,1.5666,0.23684,6.6148,{"v":3.72e-11,"d":"3.72E-11"},{"v":7.74e-10,"d":"7.74E-10"},"Transducin/WD40 repeat-like superfamily protein.","AT3G12060","TBL1",37.129,-3.0187,0.42901,-7.0363,{"v":1.97e-12,"d":"1.97E-12"},{"v":3.98e-11,"d":"3.98E-11"},"full_name=TRICHOME BIREFRINGENCE-LIKE 1. trichome birefringence-like protein (DUF828). Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT1G31100",null,52.952,-2.9653,0.38264,-7.7496,{"v":9.22e-15,"d":"9.22E-15"},{"v":1.8e-13,"d":"1.80E-13"},"transposable_element_gene.","AT4G31270","IDAP2",463.32,1.1673,0.12559,9.2947,{"v":1.48e-20,"d":"1.48E-20"},{"v":2.79e-19,"d":"2.79E-19"},"sequence-specific DNA binding transcription factor.","AT5G57110","ACA8",1191.1,0.53559,0.075544,7.0898,{"v":1.34e-12,"d":"1.34E-12"},{"v":2.47e-11,"d":"2.47E-11"},"full_name=autoinhibited Ca2+ -ATPase, isoform 8. autoinhibited Ca2+ -ATPase, isoform 8. Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane."]
["AT3G02480","ABR",11467,0.80938,0.12237,6.6144,{"v":3.73e-11,"d":"3.73E-11"},{"v":7.75e-10,"d":"7.75E-10"},"Late embryogenesis abundant protein (LEA) family protein.","AT2G38270","CXIP2",143.68,1.4588,0.20756,7.0283,{"v":2.09e-12,"d":"2.09E-12"},{"v":4.21e-11,"d":"4.21E-11"},"full_name=CAX-interacting protein 2. CAX-interacting protein 2. Encodes protein homologous to CXIP1. CXIP1 is a PICOT domain containing protein interacts with CAX1, a high capacity calcium transporter. However, CXP2 does not interact with CAX1 and only moderately activates another calcium transporter CAX4.","AT3G15260",null,6754.9,0.85755,0.11068,7.7479,{"v":9.34e-15,"d":"9.34E-15"},{"v":1.82e-13,"d":"1.82E-13"},"Protein phosphatase 2C family protein.","AT1G32150","bZIP68",214.97,-1.4345,0.15439,-9.2916,{"v":1.52e-20,"d":"1.52E-20"},{"v":2.87e-19,"d":"2.87E-19"},"full_name=basic region/leucine zipper transcription factor 68. basic region/leucine zipper transcription factor 68. Encodes a G group bZIP transcription factor family member that can bind cis elements with an ACGT core, such as G-box, Hex, C-box and As-1. The protein is localized in the nucleus and can homodimerize and can heterodimerize with other G group members.","AT4G38440","IYO",939.78,0.61018,0.086081,7.0884,{"v":1.36e-12,"d":"1.36E-12"},{"v":2.49e-11,"d":"2.49E-11"},"full_name=MINIYO. RPAP1-like, carboxy-terminal protein. Encodes MINIYO (IYO), a positive regulator of transcriptional elongation that is essential for cells to initiate differentiation."]
["AT2G35780","scpl26",414.47,-0.89337,0.13519,-6.6083,{"v":3.89e-11,"d":"3.89E-11"},8.07E-10,"full_name=serine carboxypeptidase-like 26. serine carboxypeptidase-like 26.","AT4G29020",null,821.12,0.78992,0.1124,7.0279,{"v":2.1e-12,"d":"2.10E-12"},{"v":4.21e-11,"d":"4.21E-11"},"glycine-rich protein.","AT5G18450",null,1068.2,1.3315,0.17187,7.747,{"v":9.41e-15,"d":"9.41E-15"},1.83E-13,"Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.","AT5G18130",null,2181.6,1.2321,0.13278,9.2793,{"v":1.71e-20,"d":"1.71E-20"},{"v":3.21e-19,"d":"3.21E-19"},"transmembrane protein.","AT2G27040","AGO4",403.61,-0.81675,0.11527,-7.0853,{"v":1.39e-12,"d":"1.39E-12"},{"v":2.55e-11,"d":"2.55E-11"},"full_name=ARGONAUTE 4. Argonaute family protein. AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens."]
["AT3G01480","CYP38",181.13,-1.1782,0.17834,-6.6066,{"v":3.93e-11,"d":"3.93E-11"},{"v":8.15e-10,"d":"8.15E-10"},"full_name=cyclophilin 38. cyclophilin 38. Encodes a chloroplast cyclophilin functioning in the assembly and maintenance of photosystem II (PSII) supercomplexes.","AT2G40435",null,53.81,-2.2437,0.31931,-7.0267,{"v":2.11e-12,"d":"2.11E-12"},{"v":4.24e-11,"d":"4.24E-11"},"transcription factor SCREAM-like protein.","AT5G51500",null,71.541,-2.38,0.30731,-7.7447,{"v":9.58e-15,"d":"9.58E-15"},{"v":1.87e-13,"d":"1.87E-13"},"Plant invertase/pectin methylesterase inhibitor superfamily.","AT5G58110",null,601.27,1.0083,0.10869,9.277,1.74E-20,{"v":3.28e-19,"d":"3.28E-19"},"chaperone binding / ATPase activator.","AT5G45690",null,37946,-0.39174,0.055313,-7.0823,1.42E-12,{"v":2.6e-11,"d":"2.60E-11"},"histone acetyltransferase (DUF1264)."]
["AT2G27690","CYP94C1",280.53,1.0377,0.15714,6.6034,{"v":4.02e-11,"d":"4.02E-11"},{"v":8.32e-10,"d":"8.32E-10"},"full_name=cytochrome P450, family 94, subfamily C, polypeptide 1. cytochrome P450, family 94, subfamily C, polypeptide 1. Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.","AT5G18590",null,83.87,-1.7354,0.24701,-7.0254,2.13E-12,{"v":4.28e-11,"d":"4.28E-11"},"Galactose oxidase/kelch repeat superfamily protein.","AT4G12680",null,1850.4,1.0583,0.13679,7.7371,1.02E-14,{"v":1.98e-13,"d":"1.98E-13"},"transmembrane protein.","AT3G05190",null,712.2,-1.3295,0.14332,-9.2767,1.75E-20,{"v":3.28e-19,"d":"3.28E-19"},"D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein.","AT4G19880",null,632.57,0.77045,0.1088,7.0814,1.43E-12,{"v":2.61e-11,"d":"2.61E-11"},"Glutathione S-transferase family protein."]
["AT2G23360",null,666.57,-0.98034,0.14862,-6.5961,4.22E-11,{"v":8.73e-10,"d":"8.73E-10"},"filament-like protein (DUF869).","AT4G16190",null,1165.3,0.75474,0.10751,7.0204,{"v":2.21e-12,"d":"2.21E-12"},{"v":4.43e-11,"d":"4.43E-11"},"Papain family cysteine protease.","AT4G08900","ARGAH1",213.85,1.2644,0.16344,7.7359,{"v":1.03e-14,"d":"1.03E-14"},{"v":1.99e-13,"d":"1.99E-13"},"full_name=arginine amidohydrolase 1. arginase. Encodes an arginase, likely to be involved in polyamine biosynthesis in pollen.","AT2G28200",null,52.779,-4.8359,0.52167,-9.2699,{"v":1.86e-20,"d":"1.86E-20"},{"v":3.5e-19,"d":"3.50E-19"},"C2H2-type zinc finger family protein.","AT5G08550","ILP1",482.04,0.79077,0.11172,7.0779,1.46E-12,{"v":2.68e-11,"d":"2.68E-11"},"full_name=increased level of polyploidy1-1D. GC-rich sequence DNA-binding factor-like protein. Encodes a transcriptional repressor that is homologous to the C-terminal region of mammalian GC binding factor. It regulates endoreduplication through control of CYC2A expression."]
["AT1G51570","MCTP4",523.62,-0.91069,0.13814,-6.5923,{"v":4.33e-11,"d":"4.33E-11"},{"v":8.94e-10,"d":"8.94E-10"},"Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein.","AT1G62640","KAS III",470.1,-0.82532,0.11761,-7.0175,{"v":2.26e-12,"d":"2.26E-12"},{"v":4.52e-11,"d":"4.52E-11"},"full_name=3-ketoacyl-acyl carrier protein synthase III. 3-ketoacyl-acyl carrier protein synthase III. 3-ketoacyl-acyl carrier protein synthase III (KAS III)","AT4G21020",null,21492,0.97548,0.12614,7.7331,{"v":1.05e-14,"d":"1.05E-14"},{"v":2.04e-13,"d":"2.04E-13"},"Late embryogenesis abundant protein (LEA) family protein.","AT5G49690",null,213.33,1.966,0.21212,9.2683,{"v":1.89e-20,"d":"1.89E-20"},{"v":3.55e-19,"d":"3.55E-19"},"UDP-Glycosyltransferase superfamily protein.","AT4G17410","PQT3",415.51,0.93791,0.13258,7.0743,{"v":1.5e-12,"d":"1.50E-12"},2.74E-11,"DWNN domain, a CCHC-type zinc finger."]
["AT3G28220",null,67.522,-1.9698,0.29917,-6.5842,{"v":4.57e-11,"d":"4.57E-11"},{"v":9.44e-10,"d":"9.44E-10"},"TRAF-like family protein.","AT5G53450","ORG1",452.79,0.84083,0.11985,7.0159,{"v":2.29e-12,"d":"2.29E-12"},{"v":4.57e-11,"d":"4.57E-11"},"full_name=OBP3-responsive gene 1. OBP3-responsive protein 1.","AT2G18440","GUT15",1801.8,1.1279,0.14594,7.7287,1.09E-14,{"v":2.1e-13,"d":"2.10E-13"},"other_RNA. Encodes a noncoding RNA, a member of an emerging class of transcripts that lack significant open reading frames and encode RNA as their final product.","AT5G51830","FRK1",650.25,-1.0097,0.10897,-9.2658,1.94E-20,{"v":3.63e-19,"d":"3.63E-19"},"pfkB-like carbohydrate kinase family protein.","AT1G61730",null,312.79,0.899,0.12708,7.0743,{"v":1.5e-12,"d":"1.50E-12"},2.74E-11,"DNA-binding storekeeper protein-related transcriptional regulator."]
["AT5G55250","IAMT1",94.265,-1.6492,0.25052,-6.5832,{"v":4.6e-11,"d":"4.60E-11"},{"v":9.49e-10,"d":"9.49E-10"},"full_name=IAA carboxylmethyltransferase 1. IAA carboxylmethyltransferase 1. Encodes an enzyme which specifically converts IAA to its methyl ester form MelIAA. This gene belongs to the family of carboxyl methyltransferases whose members catalyze the transfer of the methyl group from S-adenosyl-L-methionine to carboxylic acid-containing substrates to form small molecule methyl esters. Expression of TCP genes is downregulated in mutant iamt1-D.","AT5G12150","PHGAP1",407.19,-0.96288,0.1373,-7.0127,{"v":2.34e-12,"d":"2.34E-12"},{"v":4.67e-11,"d":"4.67E-11"},"Rho GTPase activation protein (RhoGAP) with PH domain-containing protein. Encodes a protein with similarity to REN1, a Rho GTPase activating protein.","AT4G02510","TOC159",1390.2,0.93573,0.12119,7.7209,1.15E-14,2.24E-13,"full_name=translocon at the outer envelope membrane of chloroplasts 159. translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly.","AT4G16620","UMAMIT8",1616.9,-1.1619,0.12548,-9.2597,2.05E-20,{"v":3.84e-19,"d":"3.84E-19"},"full_name=Usually multiple acids move in and out Transporters 8. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT4G23990","CSLG3",972.18,-0.65265,0.092301,-7.0709,{"v":1.54e-12,"d":"1.54E-12"},{"v":2.81e-11,"d":"2.81E-11"},"full_name=cellulose synthase like G3. cellulose synthase like G3. encodes a protein similar to cellulose synthase"]
["AT2G30490","C4H",786.99,-0.81295,0.12354,-6.5806,{"v":4.68e-11,"d":"4.68E-11"},{"v":9.64e-10,"d":"9.64E-10"},"full_name=cinnamate-4-hydroxylase. cinnamate-4-hydroxylase. Encodes a cinnamate-4-hydroxylase. Mutations in this gene impact phenylpropanoid metabolism, growth and development.","AT3G01310","ATVIP1",487.38,0.80607,0.115,7.0094,{"v":2.39e-12,"d":"2.39E-12"},{"v":4.77e-11,"d":"4.77E-11"},"Phosphoglycerate mutase-like family protein. Encodes a myo-inositol hexakisphosphate kinase.","AT3G48330","PIMT1",137.41,-1.5791,0.20459,-7.7185,{"v":1.18e-14,"d":"1.18E-14"},{"v":2.27e-13,"d":"2.27E-13"},"full_name=protein-l-isoaspartate methyltransferase 1. protein-l-isoaspartate methyltransferase 1. Encodes protein-L-isoaspartate methyltransferase. Important for maintaining viability as the seed ages. Involved in germination.","AT5G51440","HSP23.5",113.56,2.3442,0.25323,9.2574,{"v":2.1e-20,"d":"2.10E-20"},{"v":3.92e-19,"d":"3.92E-19"},"HSP20-like chaperones superfamily protein.","AT3G58610",null,2840,0.55635,0.078718,7.0676,{"v":1.58e-12,"d":"1.58E-12"},{"v":2.87e-11,"d":"2.87E-11"},"ketol-acid reductoisomerase."]
["AT3G03310","LCAT3",1003.8,0.78474,0.11928,6.5792,{"v":4.73e-11,"d":"4.73E-11"},{"v":9.72e-10,"d":"9.72E-10"},"full_name=lecithin:cholesterol acyltransferase 3. lecithin:cholesterol acyltransferase 3.","AT5G07140",null,62.465,-2.0637,0.29448,-7.008,{"v":2.42e-12,"d":"2.42E-12"},{"v":4.82e-11,"d":"4.82E-11"},"Protein kinase superfamily protein.","AT3G09770","LOG2",601.48,0.93,0.12056,7.7143,{"v":1.22e-14,"d":"1.22E-14"},{"v":2.35e-13,"d":"2.35E-13"},"full_name=LOSS OF GDU 2. RING/U-box superfamily protein. Encodes a ubiquitin E3 ligase LOG2 (LOSS OF GDU2). Required for GLUTAMINE DUMPER1(GDU1)-induced amino secretion.","AT1G53580","GLY3",138.19,-2.8507,0.30795,-9.2571,{"v":2.1e-20,"d":"2.10E-20"},{"v":3.92e-19,"d":"3.92E-19"},"full_name=glyoxalase II 3. glyoxalase II 3. Mononuclear Fe(II)-containing member of the b-lactamase fold superfamily. ETHE1 is homodimeric in solution, exhibits low-level esterase activity, and specifically binds a single Fe(II) atom in the active site.","AT4G39080","VHA-A3",430.55,0.83544,0.11822,7.067,{"v":1.58e-12,"d":"1.58E-12"},2.88E-11,"full_name=vacuolar proton ATPase A3. vacuolar proton ATPase A3. Vacuolar proton ATPase subunit VHA-a isoform 3. Localized in the tonoplast."]
["AT1G33415",null,89.394,1.5391,0.23413,6.5738,{"v":4.91e-11,"d":"4.91E-11"},{"v":1.01E-9,"d":"1.01E-09"},"Natural antisense transcript overlaps with AT1G33420 and AT1G33430. Potential natural antisense gene, locus overlaps with AT1G33420 and AT1G33430 Natural antisense transcript overlaps with AT1G33420 and AT1G33430","AT3G50740","UGT72E1",82.973,1.7475,0.24962,7.0004,{"v":2.55e-12,"d":"2.55E-12"},{"v":5.08e-11,"d":"5.08E-11"},"full_name=UDP-glucosyl transferase 72E1. UDP-glucosyl transferase 72E1. UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.","AT1G67740","PSBY",38.041,-3.7654,0.48836,-7.7103,1.26E-14,{"v":2.42e-13,"d":"2.42E-13"},"full_name=photosystem II BY. photosystem II BY. PsbY precursor (psbY) mRNA. This single nuclear gene is imported into the chloroplasts where it is processed into two integral membrane proteins with identical topology (PsbY-1 and PsbY-2). The protein appears to bind manganese but its role is not well understood.","AT2G24200","LAP1",1001.9,0.92903,0.10036,9.2569,{"v":2.1e-20,"d":"2.10E-20"},{"v":3.92e-19,"d":"3.92E-19"},"full_name=leucyl aminopeptidase 1. Cytosol aminopeptidase family protein.","AT1G15200",null,1254.1,-0.71601,0.10132,-7.0668,{"v":1.59e-12,"d":"1.59E-12"},2.88E-11,"protein-protein interaction regulator family protein."]
["AT4G26760","MAP65-2",287.12,-1.1887,0.18098,-6.5684,5.09E-11,{"v":1.04e-09,"d":"1.04E-09"},"full_name=microtubule-associated protein 65-2. microtubule-associated protein 65-2.","AT5G25490",null,40.109,-2.8793,0.41134,-6.9998,2.56E-12,5.09E-11,"Ran BP2/NZF zinc finger-like superfamily protein.","AT4G11320","CP2",692.14,-0.98688,0.128,-7.7098,1.26E-14,{"v":2.43e-13,"d":"2.43E-13"},"Papain family cysteine protease.","AT3G48140",null,51.724,-4.1918,0.45327,-9.248,{"v":2.29e-20,"d":"2.29E-20"},{"v":4.26e-19,"d":"4.26E-19"},"B12D protein.","AT1G48650",null,571.26,0.79511,0.11261,7.0605,1.66E-12,{"v":3.01e-11,"d":"3.01E-11"},"DEA(D/H)-box RNA helicase family protein."]
["AT1G75500","WAT1",137.74,-1.3983,0.21313,-6.561,{"v":5.35e-11,"d":"5.35E-11"},{"v":1.1e-09,"d":"1.10E-09"},"full_name=Walls Are Thin 1. Walls Are Thin 1. An Arabidopsis thaliana homolog of Medicago truncatula NODULIN21 (MtN21). The gene encodes a plant-specific, predicted integral membrane protein and is a member of the Plant-Drug/Metabolite Exporter (P-DME) family (Transporter Classification number: TC 2.A.7.3) and the nodulin MtN21-like transporter family.","AT2G32150",null,496.56,0.88413,0.12636,6.9971,2.61E-12,{"v":5.19e-11,"d":"5.19E-11"},"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein.","AT5G39530",null,241.7,1.1858,0.15382,7.709,1.27E-14,{"v":2.44e-13,"d":"2.44E-13"},"hypothetical protein (DUF1997).","AT4G24520","ATR1",1243,0.82025,0.088719,9.2455,2.34E-20,{"v":4.36e-19,"d":"4.36E-19"},"full_name=P450 reductase 1. P450 reductase 1. Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism.","AT4G29380","VPS15",1025.9,0.6154,0.087193,7.058,{"v":1.69e-12,"d":"1.69E-12"},{"v":3.06e-11,"d":"3.06E-11"},"full_name=vacuolar protein sorting 15. protein kinase family protein / WD-40 repeat family protein. The gene encodes phosphatidylinositol 3- kinase involved in the development and germination of pollen through the biosynthesis of phosphatidylinositol 3-phosphate (PI3P)."]
["AT5G06290","2-Cys Prx B",119.8,-1.3631,0.20798,-6.554,{"v":5.6E-11,"d":"5.60E-11"},{"v":1.15E-9,"d":"1.15E-09"},"full_name=2-cysteine peroxiredoxin B. 2-cysteine peroxiredoxin B. Encodes a 2-Cys peroxiredoxin (2-Cys PrxB) that contains two catalytic Cys residues.","AT2G40460",null,5485.4,0.61759,0.088266,6.997,{"v":2.62e-12,"d":"2.62E-12"},{"v":5.19e-11,"d":"5.19E-11"},"Major facilitator superfamily protein.","AT3G61380","TRM14",44.489,-3.0525,0.396,-7.7082,1.28E-14,{"v":2.45e-13,"d":"2.45E-13"},"full_name=TON1 Recruiting Motif 14. Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein.","AT4G37690","GT6",47.515,-4.5743,0.49479,-9.245,{"v":2.35e-20,"d":"2.35E-20"},{"v":4.37e-19,"d":"4.37E-19"},"Galactosyl transferase GMA12/MNN10 family protein.","AT4G18880","HSF A4A",137.37,1.4269,0.20238,7.0503,1.79E-12,{"v":3.23e-11,"d":"3.23E-11"},"full_name=heat shock transcription factor A4A. heat shock transcription factor A4A. Encodes a member of Heat Stress Transcription Factor(Hsf) family that is a substrate of the MPK3/MPK6 signaling and regulates stress responses."]
["AT2G37630","AS1",239.86,-1.1419,0.1744,-6.548,{"v":5.83e-11,"d":"5.83E-11"},{"v":1.19E-9,"d":"1.19E-09"},"full_name=ASYMMETRIC LEAVES 1. myb-like HTH transcriptional regulator family protein. Encodes a MYB-domain protein involved in specification of the leaf proximodistal axis. Mutation results in lobed and dissected leaves with a characteristic asymmetry. Homologous to the Antirrhinum PHANTASTICA (PHAN) and maize ROUGH SHEATH2 (RS2) genes Asymmetric placement of auxin response at the distal leaf tip precedes visible asymmetric leaf growth. Acts alongside AXR1 to exclude BP expression in leaves and with PIN1 to repress BP and promote lateral organ growth. Interacts physically with AS2 to form a complex that binds to the BP promoter and silences BP. Also functions as a regulator of the plant immune response.","AT1G53690",null,215.41,-1.2085,0.17278,-6.9944,2.66E-12,{"v":5.28e-11,"d":"5.28E-11"},"DNA directed RNA polymerase, 7 kDa subunit. Protein of unknown function that is homologous to At5g41010, which encodes a non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB12.","AT2G36220",null,569.33,1.1117,0.14423,7.708,1.28E-14,{"v":2.45e-13,"d":"2.45E-13"},"hypothetical protein.","AT3G49570","LSU3",316.23,-1.6297,0.17653,-9.2316,{"v":2.67e-20,"d":"2.67E-20"},{"v":4.95e-19,"d":"4.95E-19"},"full_name=RESPONSE TO LOW SULFUR 3. response to low sulfur 3.","AT3G06190","BPM2",694.89,0.64122,0.09096,7.0495,{"v":1.8E-12,"d":"1.80E-12"},{"v":3.25e-11,"d":"3.25E-11"},"full_name=BTB-POZ and MATH domain 2. BTB-POZ and MATH domain 2. Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1), AT3G06190 (BPM2), AT2G39760 (BPM3), AT3G03740 (BPM4), AT5G21010 (BPM5) and AT3G43700 (BPM6)."]
["AT2G17230","EXL5",367.42,0.98464,0.15038,6.5475,{"v":5.85e-11,"d":"5.85E-11"},{"v":1.19E-9,"d":"1.19E-09"},"full_name=EXORDIUM like 5. EXORDIUM like 5.","AT1G19900","RUBY",13009,0.78355,0.11206,6.9925,{"v":2.7e-12,"d":"2.70E-12"},{"v":5.34e-11,"d":"5.34E-11"},"glyoxal oxidase-related protein.","AT5G38780",null,30.837,4.0624,0.52705,7.7078,1.28E-14,{"v":2.46e-13,"d":"2.46E-13"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT1G80820","CCR2",57.579,-5.9938,0.64929,-9.2314,{"v":2.67e-20,"d":"2.67E-20"},{"v":4.95e-19,"d":"4.95E-19"},"full_name=cinnamoyl coa reductase. cinnamoyl coa reductase. Encodes an cinnamoyl CoA reductase isoform. Involved in lignin biosynthesis.","AT3G25495",null,951.08,-0.79647,0.11307,-7.044,{"v":1.87e-12,"d":"1.87E-12"},{"v":3.38e-11,"d":"3.38E-11"},"pseudogene. pseudogene of leucine-rich repeat protein"]
["AT1G49010","MYBS1",268.2,-1.0319,0.15766,-6.5453,{"v":5.94e-11,"d":"5.94E-11"},{"v":1.21E-9,"d":"1.21E-09"},"Duplicated homeodomain-like superfamily protein.","AT3G56350",null,10934,0.62132,0.088872,6.9912,{"v":2.73e-12,"d":"2.73E-12"},{"v":5.39e-11,"d":"5.39E-11"},"Iron/manganese superoxide dismutase family protein.","AT1G20693","HMGB2",1541.9,0.74865,0.097135,7.7073,{"v":1.29e-14,"d":"1.29E-14"},{"v":2.46e-13,"d":"2.46E-13"},"full_name=high mobility group B2. high mobility group B2. Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha.","AT2G14910",null,800.74,1.3298,0.14408,9.2297,2.71E-20,{"v":5.03e-19,"d":"5.03E-19"},"MAR-binding filament-like protein.","AT1G65730","YSL7",521.25,-0.81405,0.11567,-7.0377,1.95E-12,{"v":3.53e-11,"d":"3.53E-11"},"full_name=YELLOW STRIPE like 7. YELLOW STRIPE like 7. Arabidopsis thaliana metal-nicotianamine transporter YSL4"]
["AT5G42050","NRP",1692.7,-0.70628,0.10792,-6.5446,{"v":5.97e-11,"d":"5.97E-11"},{"v":1.22e-09,"d":"1.22E-09"},"DCD (Development and Cell Death) domain protein.","AT1G54050","HSP17.4B",58.687,2.6804,0.38371,6.9856,2.84E-12,{"v":5.6E-11,"d":"5.60E-11"},"HSP20-like chaperones superfamily protein.","AT4G16442","CASPL2B1",98.857,-1.9736,0.25617,-7.7042,1.32E-14,{"v":2.52e-13,"d":"2.52E-13"},"Uncharacterized protein family (UPF0497).","AT3G10850","GLY2",528.78,1.0337,0.11203,9.2267,{"v":2.79e-20,"d":"2.79E-20"},{"v":5.16e-19,"d":"5.16E-19"},"Metallo-hydrolase/oxidoreductase superfamily protein. glyoxalase II cytoplasmic isozyme (Glx2-2) mRNA, complete","AT3G01990","ACR6",469.47,-1.0644,0.1513,-7.0346,{"v":2E-12,"d":"2.00E-12"},{"v":3.6e-11,"d":"3.60E-11"},"full_name=ACT domain repeat 6. ACT domain repeat 6. Member of a small family of ACT domain containing proteins in Arabidopsis. ACT domains are involved in amino acid binding."]
["AT5G52750",null,28.325,-3.6576,0.55908,-6.5423,{"v":6.06e-11,"d":"6.06E-11"},{"v":1.23e-09,"d":"1.23E-09"},"Heavy metal transport/detoxification superfamily protein.","AT1G13990",null,523.16,0.82749,0.11871,6.9704,{"v":3.16e-12,"d":"3.16E-12"},{"v":6.23e-11,"d":"6.23E-11"},"plant/protein.","AT1G27300",null,1350.2,1.1515,0.14949,7.7029,{"v":1.33e-14,"d":"1.33E-14"},{"v":2.54e-13,"d":"2.54E-13"},"transmembrane protein.","AT1G08650","PPCK1",378.8,-1.4731,0.1597,-9.224,{"v":2.86e-20,"d":"2.86E-20"},{"v":5.29e-19,"d":"5.29E-19"},"full_name=phosphoenolpyruvate carboxylase kinase 1. phosphoenolpyruvate carboxylase kinase 1. Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light.","AT1G19570","DHAR1",1214.5,-0.57597,0.081936,-7.0296,{"v":2.07e-12,"d":"2.07E-12"},{"v":3.73e-11,"d":"3.73E-11"},"full_name=dehydroascorbate reductase. dehydroascorbate reductase. Encodes a member of the dehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica."]
["AT1G24330",null,31.974,2.746,0.41984,6.5405,{"v":6.13e-11,"d":"6.13E-11"},{"v":1.25E-9,"d":"1.25E-09"},"ARM repeat superfamily protein.","AT2G27050","EIL1",308.67,0.99423,0.14264,6.9703,{"v":3.16e-12,"d":"3.16E-12"},{"v":6.23e-11,"d":"6.23E-11"},"full_name=ETHYLENE-INSENSITIVE3-like 1. ETHYLENE-INSENSITIVE3-like 1. ethylene-insensitive3-like1 (EIL1)","AT5G07460","PMSR2",50.018,-2.8485,0.37011,-7.6962,{"v":1.4E-14,"d":"1.40E-14"},{"v":2.68e-13,"d":"2.68E-13"},"full_name=peptidemethionine sulfoxide reductase 2. peptidemethionine sulfoxide reductase 2. ubiquitous enzyme that repairs oxidatively damaged proteins. Methionine sulfoxide reductase activity. Mutant lacking reductase activity showed increased protein oxidation, nitration and glycation of specific amino acid residues during darkness.","AT5G01350",null,983.48,0.99714,0.10813,9.2221,{"v":2.91e-20,"d":"2.91E-20"},{"v":5.38e-19,"d":"5.38E-19"},"UvrABC system C protein.","AT1G21160",null,544.68,0.70427,0.10019,7.0294,{"v":2.07e-12,"d":"2.07E-12"},{"v":3.73e-11,"d":"3.73E-11"},"eukaryotic translation initiation factor 2 (eIF-2) family protein."]
["AT3G54890","LHCA1",808.75,-2.3365,0.35725,-6.5401,{"v":6.15e-11,"d":"6.15E-11"},{"v":1.25E-9,"d":"1.25E-09"},"full_name=photosystem I light harvesting complex gene 1. chlorophyll a-b binding protein 6. Encodes a component of the light harvesting complex associated with photosystem I.","AT5G52310","LTI78",64.13,2.0956,0.3007,6.969,{"v":3.19e-12,"d":"3.19E-12"},{"v":6.27e-11,"d":"6.27E-11"},"full_name=LOW-TEMPERATURE-INDUCED 78. low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A). cold regulated gene, the 5' region of cor78 has cis-acting regulatory elements that can impart cold-regulated gene expression","AT5G45860","PYL11",31.381,4.0737,0.52995,7.6869,1.51E-14,{"v":2.87e-13,"d":"2.87E-13"},"full_name=PYR1-like 11. PYR1-like 11. Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.","AT4G39080","VHA-A3",402.59,-1.1818,0.12816,-9.221,{"v":2.94e-20,"d":"2.94E-20"},{"v":5.43e-19,"d":"5.43E-19"},"full_name=vacuolar proton ATPase A3. vacuolar proton ATPase A3. Vacuolar proton ATPase subunit VHA-a isoform 3. Localized in the tonoplast.","AT1G20960","emb1507",3417.1,0.48878,0.069536,7.0293,2.08E-12,{"v":3.73e-11,"d":"3.73E-11"},"full_name=embryo defective 1507. U5 small nuclear ribonucleoprotein helicase."]
["AT5G25490",null,134.59,-1.3331,0.20389,-6.5384,{"v":6.22e-11,"d":"6.22E-11"},{"v":1.26E-9,"d":"1.26E-09"},"Ran BP2/NZF zinc finger-like superfamily protein.","AT5G58720",null,602.71,0.83772,0.12021,6.969,{"v":3.19e-12,"d":"3.19E-12"},{"v":6.27e-11,"d":"6.27E-11"},"smr (Small MutS Related) domain-containing protein.","AT5G17980","MCTP16",106.79,-1.8915,0.24616,-7.6839,{"v":1.54e-14,"d":"1.54E-14"},{"v":2.94e-13,"d":"2.94E-13"},"C2 calcium/lipid-binding plant phosphoribosyltransferase family protein.","AT1G01490","ATHMP01",118.71,-2.298,0.24924,-9.2198,{"v":2.98e-20,"d":"2.98E-20"},{"v":5.48e-19,"d":"5.48E-19"},"Heavy metal transport/detoxification superfamily protein.","AT5G28300","GT2L",865.23,-0.67284,0.095808,-7.0228,{"v":2.17e-12,"d":"2.17E-12"},{"v":3.9e-11,"d":"3.90E-11"},"Duplicated homeodomain-like superfamily protein. Encodes a Ca(2+)-dependent CaM-binding protein. AtGT2L specifically targets the nucleus and possesses both transcriptional activation and DNA-binding abilities, implicating its function as a nuclear transcription factor."]
["AT1G73220","2024-10-01",1380.4,0.71117,0.10883,6.5345,{"v":6.38e-11,"d":"6.38E-11"},{"v":1.29e-09,"d":"1.29E-09"},"full_name=organic cation/carnitine transporter1. organic cation/carnitine transporter1.","AT1G72570","AIL1",710.51,1.0046,0.1443,6.9621,{"v":3.35e-12,"d":"3.35E-12"},{"v":6.58e-11,"d":"6.58E-11"},"Integrase-type DNA-binding superfamily protein.","AT4G12110","SMO1-1",84.304,-1.9566,0.25471,-7.6817,{"v":1.57e-14,"d":"1.57E-14"},{"v":2.99e-13,"d":"2.99E-13"},"full_name=sterol-4alpha-methyl oxidase 1-1. sterol-4alpha-methyl oxidase 1-1. Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. More specifically functions as a 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha- methyl oxidase.","AT2G43510","TI1",114.3,-2.7211,0.29527,-9.2156,{"v":3.09e-20,"d":"3.09E-20"},{"v":5.69e-19,"d":"5.69E-19"},"full_name=trypsin inhibitor protein 1. trypsin inhibitor protein 1. Member of the defensin-like (DEFL) family. Encodes putative trypsin inhibitor protein which may function in defense against herbivory.","AT5G44260","TZF5",498.69,-0.98203,0.13991,-7.0191,2.23E-12,{"v":4e-11,"d":"4.00E-11"},"Zinc finger C-x8-C-x5-C-x3-H type family protein."]
["AT2G24645",null,47.918,-2.4728,0.37843,-6.5345,{"v":6.38e-11,"d":"6.38E-11"},{"v":1.29e-09,"d":"1.29E-09"},"Transcriptional factor B3 family protein.","AT2G44350","ATCS",1324.2,0.62416,0.089717,6.957,{"v":3.48e-12,"d":"3.48E-12"},{"v":6.81e-11,"d":"6.81E-11"},"Citrate synthase family protein. encodes a mitochrondrion targeted citrate synthase, the first enzyme of the tricarboxylic acid cycle, catalyzing the condensation of acetyl-CoA and oxaloacetate, finally yielding citrate and CoA.","AT2G14880","SWIB2",217.88,1.3949,0.18172,7.6764,{"v":1.64e-14,"d":"1.64E-14"},{"v":3.11e-13,"d":"3.11E-13"},"SWIB/MDM2 domain superfamily protein.","AT3G23400","FIB4",628.96,-1.0606,0.11517,-9.2092,3.28E-20,{"v":6.03e-19,"d":"6.03E-19"},"full_name=fibrillin 4. Plastid-lipid associated protein PAP / fibrillin family protein. Encodes FIBRILLIN 4 (FIB4). The fibrillins are a large family of chloroplast proteins that have been linked with stress tolerance and disease resistance. FIBRILLIN 4 is required for plastoglobule development and stress resistance.","AT3G16990",null,959.66,-0.63408,0.090364,-7.017,{"v":2.27e-12,"d":"2.27E-12"},{"v":4.06e-11,"d":"4.06E-11"},"heme oxygenase-like, multi-helical."]
["AT2G34790","MEE23",462.05,1.051,0.16087,6.533,{"v":6.45e-11,"d":"6.45E-11"},{"v":1.3e-09,"d":"1.30E-09"},"full_name=MATERNAL EFFECT EMBRYO ARREST 23. FAD-binding Berberine family protein.","AT1G04040",null,36.38,2.9065,0.41784,6.956,{"v":3.5E-12,"d":"3.50E-12"},{"v":6.85e-11,"d":"6.85E-11"},"HAD superfamily, subfamily IIIB acid phosphatase.","AT1G05350",null,137.64,-1.5042,0.19608,-7.6713,{"v":1.7E-14,"d":"1.70E-14"},{"v":3.23e-13,"d":"3.23E-13"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT1G10760","SEX1",109.45,-2.1575,0.23431,-9.2078,{"v":3.33e-20,"d":"3.33E-20"},{"v":6.11e-19,"d":"6.11E-19"},"full_name=STARCH EXCESS 1. Pyruvate phosphate dikinase, PEP/pyruvate binding domain-containing protein. Encodes an &#945;-glucan, water dikinase required for starch degradation. Involved in cold-induced freezing tolerance. Mutations that eliminate the GWD protein or affect the dikinase domain of the enzyme dramatically reduce both the amount of phosphate in the amylopectin and the rate of starch degradation. Mature leaves of these mutants accumulate amounts of starch up to seven times greater than those in wild-type leaves. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C6 position.","AT3G18290","BTS",588.44,0.73515,0.10477,7.0166,{"v":2.27e-12,"d":"2.27E-12"},{"v":4.07e-11,"d":"4.07E-11"},"full_name=BRUTUS. zinc finger protein-like protein. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency."]
["AT5G65750",null,1669.5,0.62601,0.095884,6.5289,{"v":6.63e-11,"d":"6.63E-11"},{"v":1.34e-09,"d":"1.34E-09"},"2-oxoglutarate dehydrogenase, E1 component.","AT1G55130","TMN6",88.709,-1.6411,0.23596,-6.955,{"v":3.53e-12,"d":"3.53E-12"},{"v":6.9e-11,"d":"6.90E-11"},"full_name=transmembrane nine 6. Endomembrane protein 70 protein family. Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.","AT1G05160","CYP88A3",273.08,-1.214,0.1583,-7.6689,1.74E-14,{"v":3.29e-13,"d":"3.29E-13"},"full_name=cytochrome P450, family 88, subfamily A, polypeptide 3. cytochrome P450, family 88, subfamily A, polypeptide 3. Encodes an ent-kaurenoic acid hydroxylase, a member of the CYP88A cytochrome p450 family.","AT1G08830","CSD1",371.49,-1.2932,0.1405,-9.2043,{"v":3.44e-20,"d":"3.44E-20"},{"v":6.31e-19,"d":"6.31E-19"},"full_name=copper/zinc superoxide dismutase 1. copper/zinc superoxide dismutase 1. Encodes a cytosolic copper/zinc superoxide dismutase CSD1 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage. Regulated by biotic and abiotic stress. Activation of CSD1 in the cytoplasm involves both a CCS-dependent and -independent pathway.","AT1G68830","STN7",558.82,-0.72246,0.10297,-7.0162,2.28E-12,{"v":4.07e-11,"d":"4.07E-11"},"full_name=STT7 homolog STN7. Serine/Threonine kinase domain protein. STN7 protein kinase; required for state transitions, phosphorylation of the major antenna complex (LHCII) between PSII and PSI, and light adaptation"]
["AT1G69790","PBL18",58.855,1.8584,0.28465,6.5287,{"v":6.63e-11,"d":"6.63E-11"},{"v":1.34e-09,"d":"1.34E-09"},"Protein kinase superfamily protein.","AT4G00770","TRM9",36.46,-3.1129,0.44788,-6.9503,3.65E-12,{"v":7.12e-11,"d":"7.12E-11"},"full_name=TON1 Recruiting Motif 9. DUF4378 domain protein.","AT5G06750","APD8",158.5,2.0775,0.27097,7.6667,1.77E-14,{"v":3.34e-13,"d":"3.34E-13"},"Protein phosphatase 2C family protein.","AT2G43820","UGT74F2",371.18,1.4881,0.16176,9.1993,{"v":3.6e-20,"d":"3.60E-20"},{"v":6.6e-19,"d":"6.60E-19"},"full_name=UDP-glucosyltransferase 74F2. UDP-glucosyltransferase 74F2. Induced by Salicylic acid, virus, fungus and bacteria.Involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and athranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F2 are not known, but mutant plants lacking UGT74F2 have a decreased level of SAG and SGE.","AT1G30970","SUF4",534.21,-0.78268,0.11165,-7.0101,2.38E-12,{"v":4.25e-11,"d":"4.25E-11"},"full_name=suppressor of FRIGIDA4. zinc finger (C2H2 type) family protein. Encodes SUF4 (SUPPRESSOR of FRI 4), a putative zinc-finger-containing transcription factor that is required for delayed flowering in winter-annual Arabidopsis. suf4 mutations strongly suppress the late-flowering phenotype of FRI (FRIGIDA) mutants. suf4 mutants also show reduced H3K4 trimethylation at FLC (FLOWERING LOCUS C), a floral inhibitor. SUF4 may act to specifically recruit a putative histone H3 methyltransferase EFS (EARLY FLOWERING IN SHORT DAYS) and the PAF1-like complex to the FLC locus."]
["AT5G65230","MYB53",51.013,-2.2197,0.34031,-6.5226,{"v":6.91e-11,"d":"6.91E-11"},{"v":1.39E-9,"d":"1.39E-09"},"full_name=myb domain protein 53. myb domain protein 53. Member of the R2R3 factor gene family.","AT3G59820","LETM1",168.25,1.3441,0.1934,6.95,3.65E-12,{"v":7.13e-11,"d":"7.13E-11"},"full_name=leucine zipper-EF-hand-containing transmembrane protein 1. LETM1-like protein.","AT5G47635",null,95.324,-1.9966,0.26057,-7.6625,{"v":1.82e-14,"d":"1.82E-14"},{"v":3.45e-13,"d":"3.45E-13"},"Pollen Ole e 1 allergen and extensin family protein.","AT5G05880","UGT76C4",138.67,2.372,0.25786,9.1987,{"v":3.62e-20,"d":"3.62E-20"},{"v":6.63e-19,"d":"6.63E-19"},"UDP-Glycosyltransferase superfamily protein.","AT5G04340","ZAT6",335.39,1.0222,0.14588,7.007,{"v":2.44e-12,"d":"2.44E-12"},4.34E-11,"full_name=zinc finger of Arabidopsis thaliana 6. 6. putative c2h2 zinc finger transcription factor mRNA,"]
["AT4G39050","KIN7.4",381.55,-0.94491,0.14489,-6.5215,{"v":6.96e-11,"d":"6.96E-11"},{"v":1.4e-09,"d":"1.40E-09"},"Kinesin motor family protein.","AT2G46790","PRR9",88.043,1.9958,0.28729,6.9468,{"v":3.74e-12,"d":"3.74E-12"},{"v":7.28e-11,"d":"7.28E-11"},"full_name=pseudo-response regulator 9. pseudo-response regulator 9. Pseudo-response regulator PRR9. Involved in clock function. PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR9. Interact with TOC1 in a yeast two-hybrid assay. Acts as transcriptional repressor of CCA1 and LHY.","AT1G70770",null,629.91,-0.8806,0.11493,-7.6623,{"v":1.83e-14,"d":"1.83E-14"},{"v":3.45e-13,"d":"3.45E-13"},"transmembrane protein (Protein of unknown function DUF2359, transmembrane).","AT5G58590","RANBP1",704.84,1.2341,0.13417,9.1978,{"v":3.65e-20,"d":"3.65E-20"},{"v":6.68e-19,"d":"6.68E-19"},"full_name=RAN binding protein 1. RAN binding protein 1. Encodes a Ran-binding protein 1 homolog (RanBP1).","AT3G53160","UGT73C7",70.236,2.1015,0.29993,7.0066,{"v":2.44e-12,"d":"2.44E-12"},{"v":4.35e-11,"d":"4.35E-11"},"full_name=UDP-glucosyl transferase 73C7. UDP-glucosyl transferase 73C7."]
["AT1G61440",null,49.388,-2.3462,0.35981,-6.5206,{"v":7e-11,"d":"7.00E-11"},{"v":1.41e-09,"d":"1.41E-09"},"S-locus lectin protein kinase family protein.","AT5G13700","PAO1",103.1,1.6457,0.23692,6.9461,{"v":3.76e-12,"d":"3.76E-12"},{"v":7.31e-11,"d":"7.31E-11"},"full_name=polyamine oxidase 1. polyamine oxidase 1. Encodes a protein with polyamine oxidase activity. The mRNA of this gene is only expressed in very low amounts in the organs where it was detected (light-grown plants).","AT3G04000",null,128.71,1.6525,0.21574,7.6599,{"v":1.86e-14,"d":"1.86E-14"},{"v":3.51e-13,"d":"3.51E-13"},"NAD(P)-binding Rossmann-fold superfamily protein. ChlADR is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on saturated and alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. The N-terminal region of this protein directs GFP to the chloroplast where where ChlADR likely helps to maintain the photosynthetic process by detoxifying reactive carbonyls formed during lipid peroxidation. In addition, this enzyme can also reduce cis-3-hexenal, a major plant volatile compound that contributes to green leaf odor, as well as methylglyoxal in vitro.","AT5G26570","PWD",508.64,1.06,0.11538,9.1873,{"v":4.03e-20,"d":"4.03E-20"},{"v":7.35e-19,"d":"7.35E-19"},"full_name=PHOSPHOGLUCAN WATER DIKINASE. chloroplastidic phosphoglucan, water dikinase (ATGWD3). chloroplastidic phosphoglucan, water dikinase (PWD) which is required for normal degradation of leaf starch in Arabidopsis. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C3 position.","AT1G29120","UP9",579.15,0.68446,0.097692,7.0063,{"v":2.45e-12,"d":"2.45E-12"},{"v":4.35e-11,"d":"4.35E-11"},"Hydrolase-like protein family."]
["AT1G08910","PIAL1",424.26,0.8769,0.13453,6.5181,{"v":7.12e-11,"d":"7.12E-11"},{"v":1.43E-9,"d":"1.43E-09"},"zinc ion binding protein. Encodes an SP-RING domain containing protein that functions in sumolaytion and is involved in positive regulation of sulfur metabolism and stress response.","AT3G07650","COL9",125.22,-1.8467,0.26611,-6.9395,{"v":3.93e-12,"d":"3.93E-12"},{"v":7.65e-11,"d":"7.65E-11"},"full_name=CONSTANS-like 9. CONSTANS-like 9. This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO.","AT3G01720","ATSERGT1",274.47,-1.3297,0.17365,-7.6576,1.89E-14,{"v":3.57e-13,"d":"3.57E-13"},"peptidyl serine alpha-galactosyltransferase.","AT2G25620","DBP1",218.42,-1.4836,0.16149,-9.1871,{"v":4.04e-20,"d":"4.04E-20"},{"v":7.36e-19,"d":"7.36E-19"},"full_name=DNA-binding protein phosphatase 1. DNA-binding protein phosphatase 1. Encodes DBP1, a member of the DBP factors (DNA-binding protein phosphatases) featuring sequence-specific DNA-binding and protein phosphatase activity. DBP1 is involved in plant-potyvirus interactions. Loss-of-function of DBP1 renders resistance to potyviruses.","AT1G14760","KNATM",77.407,-1.8376,0.26236,-7.0039,{"v":2.49e-12,"d":"2.49E-12"},4.42E-11,"full_name=KNOX Arabidopsis thaliana meinox. KNOX meinox protein. Encodes a novel Arabidopsis KNOX gene that encodes a MEINOX domain but lacks the homeodomain and interacts with TALE-class homeodomain proteins to modulate their activities"]
["AT1G79750","NADP-ME4",2937.3,-0.58148,0.089224,-6.5171,{"v":7.17e-11,"d":"7.17E-11"},{"v":1.44E-9,"d":"1.44E-09"},"full_name=NADP-malic enzyme 4. NADP-malic enzyme 4. The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed.","AT2G39900","WLIM2a",39.036,-2.977,0.42972,-6.9279,{"v":4.27e-12,"d":"4.27E-12"},{"v":8.3e-11,"d":"8.30E-11"},"full_name=WLIM2a. GATA type zinc finger transcription factor family protein. Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization.","AT1G30680","ATH",179.62,1.3897,0.18149,7.657,{"v":1.9e-14,"d":"1.90E-14"},{"v":3.58e-13,"d":"3.58E-13"},"toprim domain-containing protein.","AT5G17550","PEX19-2",1516.9,1.1365,0.12375,9.1836,4.17E-20,{"v":7.59e-19,"d":"7.59E-19"},"full_name=peroxin 19-2. peroxin 19-2.","AT2G02160","ATC3H17",978.23,0.62193,0.088816,7.0024,{"v":2.52e-12,"d":"2.52E-12"},4.46E-11,"CCCH-type zinc finger family protein."]
["AT3G29190",null,359.57,1.2224,0.1876,6.5162,{"v":7.21e-11,"d":"7.21E-11"},{"v":1.44E-9,"d":"1.44E-09"},"Terpenoid cyclases/Protein prenyltransferases superfamily protein.","AT3G24040",null,152.26,-1.2496,0.18042,-6.9263,{"v":4.32e-12,"d":"4.32E-12"},{"v":8.39e-11,"d":"8.39E-11"},"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein.","AT1G56300","DJC53",269.05,-1.238,0.16171,-7.6557,1.92E-14,{"v":3.62e-13,"d":"3.62E-13"},"Chaperone DnaJ-domain superfamily protein.","AT1G32920",null,119.68,-2.8497,0.31034,-9.1823,{"v":4.22e-20,"d":"4.22E-20"},{"v":7.68e-19,"d":"7.68E-19"},"hypothetical protein.","AT2G43710","SSI2",405.45,-0.91324,0.13061,-6.9922,2.71E-12,{"v":4.8e-11,"d":"4.80E-11"},"full_name=suppressor of SA insensitive 2. Plant stearoyl-acyl-carrier-protein desaturase family protein. Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates."]
["AT4G05110","ENT6",947.38,0.66144,0.10152,6.5153,{"v":7.25e-11,"d":"7.25E-11"},{"v":1.45E-9,"d":"1.45E-09"},"full_name=equilibrative nucleoside transporter 6. equilibrative nucleoside transporter 6.","AT5G14030",null,1350.5,-0.73629,0.10632,-6.9249,4.36E-12,{"v":8.46e-11,"d":"8.46E-11"},"translocon-associated protein beta (TRAPB) family protein.","AT1G53000","CKS",370,-1.012,0.13226,-7.6519,{"v":1.98e-14,"d":"1.98E-14"},{"v":3.72e-13,"d":"3.72E-13"},"full_name=CMP-KDO synthetase. Nucleotide-diphospho-sugar transferases superfamily protein. Encodes a mitochondrial-localized CMP-KDO (3-deoxy-D-manno-octulosonate) synthetase. This is the enzyme activating KDO as a nucleotide sugar prior to its incorporation into rhamnogalacturonan-II. Heterozygous mutants are defective in pollen development and in pollen tube elongation.","AT3G09390","MT2A",4925.9,0.92916,0.10119,9.1819,{"v":4.24e-20,"d":"4.24E-20"},{"v":7.69e-19,"d":"7.69E-19"},"full_name=metallothionein 2A. metallothionein 2A. metallothionein, binds to and detoxifies excess copper and other metals, limiting oxidative damage","AT1G27730","STZ",472.75,-0.99002,0.14168,-6.9875,{"v":2.8e-12,"d":"2.80E-12"},{"v":4.96e-11,"d":"4.96E-11"},"full_name=salt tolerance zinc finger. salt tolerance zinc finger. Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress."]
["AT2G43360","BIO2",665.28,-0.90254,0.1386,-6.5118,{"v":7.43e-11,"d":"7.43E-11"},{"v":1.48e-09,"d":"1.48E-09"},"full_name=BIOTIN AUXOTROPH 2. Radical SAM superfamily protein. Catalyzes the conversion of dethiobiotin to biotin.","AT4G20140","GSO1",512.4,-0.94831,0.13694,-6.9248,{"v":4.37e-12,"d":"4.37E-12"},{"v":8.46e-11,"d":"8.46E-11"},"full_name=GASSHO1. Leucine-rich repeat transmembrane protein kinase. Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis.","AT1G73010","PS2",1123.9,1.54,0.20153,7.6416,2.15E-14,4.03E-13,"full_name=phosphate starvation-induced gene 2. inorganic pyrophosphatase 1. Encodes PPsPase1, a pyrophosphate-specific phosphatase catalyzing the specific cleavage of pyrophosphate (Km 38.8 uM) with an alkaline catalytic pH optimum. Expression is upregulated in the shoot of cax1/cax3 mutant.","AT3G03920",null,668.67,0.98843,0.10776,9.1727,{"v":4.61e-20,"d":"4.61E-20"},{"v":8.37e-19,"d":"8.37E-19"},"H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein.","AT1G17810","BETA-TIP",16864,-0.41925,0.060006,-6.9869,{"v":2.81e-12,"d":"2.81E-12"},4.97E-11,"full_name=beta-tonoplast intrinsic protein. beta-tonoplast intrinsic protein. beta-tonoplast intrinsic protein (beta-TIP) mRNA, complete"]
["AT1G71160","KCS7",28.267,3.062,0.47037,6.5098,{"v":7.53e-11,"d":"7.53E-11"},{"v":1.5E-9,"d":"1.50E-09"},"full_name=3-ketoacyl-CoA synthase 7. 3-ketoacyl-CoA synthase 7. Encodes KCS7, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT3G53380","LECRK-VIII.1",165.16,-1.2651,0.1827,-6.9242,{"v":4.38e-12,"d":"4.38E-12"},{"v":8.48e-11,"d":"8.48E-11"},"Concanavalin A-like lectin protein kinase family protein.","AT1G51500","ABCG12",259.5,-1.3397,0.1754,-7.6384,{"v":2.2e-14,"d":"2.20E-14"},{"v":4.13e-13,"d":"4.13E-13"},"full_name=ATP-binding cassette G12. ABC-2 type transporter family protein. Encodes an ABC transporter involved in cuticular wax biosynthesis. Lines carrying recessive mutations in this locus have weakly glaucous stem surface, and relative elevated secondary alcohols and ketones.","AT2G25450","GSL-OH",50.427,-4.3348,0.47269,-9.1705,{"v":4.71e-20,"d":"4.71E-20"},{"v":8.53e-19,"d":"8.53E-19"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. encodes a protein whose sequence is similar to ACC oxidase","AT5G56600","PRF3",101.1,-1.7135,0.24592,-6.9675,{"v":3.23e-12,"d":"3.23E-12"},{"v":5.7e-11,"d":"5.70E-11"},"full_name=profilin 3. profilin. Encodes profilin3, a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Originally known as profilin5, and later named profilin3. Expressed in vegetative organs."]
["AT4G09160","PATL5",333.02,-1.0849,0.16671,-6.5078,{"v":7.62e-11,"d":"7.62E-11"},{"v":1.52e-09,"d":"1.52E-09"},"SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein.","AT4G25040","CASPL1F1",329.61,1.2889,0.1862,6.9222,{"v":4.45e-12,"d":"4.45E-12"},{"v":8.59e-11,"d":"8.59E-11"},"Uncharacterized protein family (UPF0497).","AT1G07473",null,282.07,1.4133,0.18518,7.6324,{"v":2.3E-14,"d":"2.30E-14"},{"v":4.32e-13,"d":"4.32E-13"},"hypothetical protein.","AT1G09210","CRT1b",132.2,-2.2294,0.24312,-9.17,{"v":4.73e-20,"d":"4.73E-20"},{"v":8.56e-19,"d":"8.56E-19"},"full_name=calreticulin 1b. calreticulin 1b. Encodes one of three Arabidopsis calreticulins.","AT5G64270",null,1761.6,0.5312,0.076252,6.9664,{"v":3.25e-12,"d":"3.25E-12"},{"v":5.74e-11,"d":"5.74E-11"},"splicing factor."]
["AT4G10020","HSD5",5318.8,0.62456,0.095995,6.5061,{"v":7.71e-11,"d":"7.71E-11"},{"v":1.54e-09,"d":"1.54E-09"},"full_name=hydroxysteroid dehydrogenase 5. hydroxysteroid dehydrogenase 5. Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.","AT5G13800","PPH",1334.2,1.0743,0.15529,6.9178,{"v":4.59e-12,"d":"4.59E-12"},{"v":8.85e-11,"d":"8.85E-11"},"full_name=pheophytinase. pheophytinase. Encodes a pheophytinase that is involved in chlorophyll breakdown. Its transcript levels increase during senescence and pph-1 mutants have a stay-green phenotype.","AT4G02110",null,68.674,3.0013,0.39324,7.6321,{"v":2.31e-14,"d":"2.31E-14"},{"v":4.32e-13,"d":"4.32E-13"},"transcription coactivator.","AT1G52870",null,349.32,1.7097,0.1866,9.1622,{"v":5.09e-20,"d":"5.09E-20"},{"v":9.2e-19,"d":"9.20E-19"},"Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein.","AT3G60030","SPL12",819.15,0.63548,0.091226,6.966,{"v":3.26e-12,"d":"3.26E-12"},{"v":5.75e-11,"d":"5.75E-11"},"full_name=squamosa promoter-binding protein-like 12. squamosa promoter-binding protein-like 12."]
["AT5G40800","AITR4",35.142,-2.5838,0.3972,-6.5051,{"v":7.76e-11,"d":"7.76E-11"},{"v":1.54e-09,"d":"1.54E-09"},"hypothetical protein.","AT5G17380",null,499.96,0.79572,0.11506,6.9156,{"v":4.66e-12,"d":"4.66E-12"},{"v":8.98e-11,"d":"8.98E-11"},"Thiamine pyrophosphate dependent pyruvate decarboxylase family protein.","AT5G11520","ASP3",1274.6,0.9354,0.12261,7.6292,{"v":2.36e-14,"d":"2.36E-14"},{"v":4.41e-13,"d":"4.41E-13"},"full_name=aspartate aminotransferase 3. aspartate aminotransferase 3. Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves.","AT2G47470","UNE5",560.51,-1.104,0.12051,-9.1609,5.15E-20,{"v":9.3e-19,"d":"9.30E-19"},"full_name=UNFERTILIZED EMBRYO SAC 5. thioredoxin family protein. Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.","AT5G42090",null,1111.9,-0.55493,0.079685,-6.964,{"v":3.31e-12,"d":"3.31E-12"},{"v":5.83e-11,"d":"5.83E-11"},"Lung seven transmembrane receptor family protein."]
["AT5G22940","F8H",29.617,-3.0015,0.4614,-6.5051,{"v":7.77e-11,"d":"7.77E-11"},{"v":1.54e-09,"d":"1.54E-09"},"full_name=FRA8 homolog. glucuronoxylan glucuronosyltransferase, putative. Homolog of FRA8 (AT2G28110), a member of a member of glycosyltransferase family 47; exhibits high sequence similarity to tobacco (Nicotiana plumbaginifolia) pectin glucuronyltransferase.","AT5G03640","AGC1-8",257.79,1.1825,0.17102,6.9144,{"v":4.7e-12,"d":"4.70E-12"},{"v":9.05e-11,"d":"9.05E-11"},"Protein kinase superfamily protein.","AT3G07460",null,70.068,-2.7947,0.36645,-7.6265,2.41E-14,{"v":4.5E-13,"d":"4.50E-13"},"transmembrane protein, putative (Protein of unknown function, DUF538).","AT2G47400","CP12-1",322.5,1.3005,0.14199,9.1597,{"v":5.21e-20,"d":"5.21E-20"},{"v":9.4e-19,"d":"9.40E-19"},"full_name=CP12 domain-containing protein 1. CP12 domain-containing protein 1. CP12-1 encodes a small peptide found in the chloroplast stroma. It belongs to the CP12 gene family thought to be involved in the formation of a supramolecular complex with glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK) embedded in the Calvin cycle.","AT5G19440",null,553.03,0.78339,0.11252,6.9621,{"v":3.35e-12,"d":"3.35E-12"},{"v":5.9e-11,"d":"5.90E-11"},"NAD(P)-binding Rossmann-fold superfamily protein. similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase"]
["AT1G07500","SMR5",44.082,2.1923,0.33725,6.5006,{"v":8e-11,"d":"8.00E-11"},{"v":1.59e-09,"d":"1.59E-09"},"hypothetical protein.","AT3G24520","HSFC1",103.74,1.663,0.24055,6.9133,{"v":4.74e-12,"d":"4.74E-12"},{"v":9.11e-11,"d":"9.11E-11"},"full_name=heat shock transcription factor C1. heat shock transcription factor C1. member of Heat Stress Transcription Factor (Hsf) family","AT1G62180","2024-04-02",1052.3,1.6589,0.2176,7.6236,{"v":2.47e-14,"d":"2.47E-14"},{"v":4.6e-13,"d":"4.60E-13"},"full_name=5'adenylylphosphosulfate reductase 2. 5'adenylylphosphosulfate reductase 2. encodes a adenosine 5'-phosphosulfate reductase, involved in sulfate assimilation. Is a major effect locus for natural variation of shoot sulfate content in Arabidopsis.","AT5G42810","IPK1",203.08,-1.4721,0.16077,-9.1565,{"v":5.36e-20,"d":"5.36E-20"},{"v":9.67e-19,"d":"9.67E-19"},"full_name=inositol-pentakisphosphate 2-kinase 1. inositol-pentakisphosphate 2-kinase 1. Encodes an inositol tetra-/pentaphosphate 2-kinase, involved in the biosynthesis of phytic acid, a regulator of intracellular signaling, a highly abundant animal antinutrient, and a phosphate and mineral storage compound in plant seeds. Is also required for growth and modulates phosphate homeostasis at the transcriptional level.","AT1G12330",null,742.36,0.64592,0.092835,6.9578,{"v":3.46e-12,"d":"3.46E-12"},{"v":6.07e-11,"d":"6.07E-11"},"cyclin-dependent kinase-like protein."]
["AT3G51300","ROP1",25.78,-4.8664,0.74862,-6.5005,8.01E-11,{"v":1.59e-09,"d":"1.59E-09"},"full_name=RHO-related protein from plants 1. RHO-related protein from plants 1. Encodes a pollen-specific Rop GTPase, member of the Rho family of small GTP binding proteins that interacts with RIC3 and RIC4 to control tip growth in pollen tubes. These three proteins promote the proper targeting of exocytic vesicles in the pollen tube tip. ROP1 activity is regulated by the REN1 GTPase activator protein.","AT3G62700","ABCC14",1138.3,0.67211,0.097329,6.9056,{"v":5e-12,"d":"5.00E-12"},{"v":9.61e-11,"d":"9.61E-11"},"full_name=ATP-binding cassette C14. multidrug resistance-associated protein 10. member of MRP subfamily","AT3G28920","HB34",636.88,0.83947,0.11013,7.6228,{"v":2.48e-14,"d":"2.48E-14"},{"v":4.62e-13,"d":"4.62E-13"},"full_name=homeobox protein 34. homeobox protein 34.","AT5G47530",null,50.019,-5.186,0.56701,-9.1463,{"v":5.89e-20,"d":"5.89E-20"},{"v":1.06e-18,"d":"1.06E-18"},"Auxin-responsive family protein.","AT5G67570","DG1",450.47,0.7745,0.11132,6.9571,3.47E-12,{"v":6.1e-11,"d":"6.10E-11"},"full_name=DELAYED GREENING 1. Tetratricopeptide repeat (TPR)-like superfamily protein. Encodes a pentratricopeptide repeat containing protein that is targeted to the chloroplast. Mutants have pale young leave and reduced accumulation of plastid encoded transcripts suggesting a role for DG1 in regulation of plastid gene expression."]
["AT5G58250","EMB3143",245.75,-1.1058,0.17018,-6.4981,{"v":8.13e-11,"d":"8.13E-11"},{"v":1.61E-9,"d":"1.61E-09"},"full_name=EMBRYO DEFECTIVE 3143. YCF54.","AT1G24490","ALB4",457.87,0.88215,0.12783,6.9007,5.17E-12,{"v":9.93e-11,"d":"9.93E-11"},"full_name=ALBINA 4. OxaA/YidC-like membrane insertion protein. Homologue of the Alb3/Oxa1/YidC family. ALB4 is almost identical to the Alb3/Oxa1/YidC domain of the previously described 110 kDa inner envelope protein ARTEMIS. However, ALB4 is expressed as a separate 55 kDa protein and is located in the thylakoid membrane of chloroplasts. Analysis of a T-DNA insertion line with a reduced level of Alb4 revealed chloroplasts with an altered ultrastructure. Mutant plastids are larger, more spherical in appearance and the grana stacks within the mutant lines are less appressed than in the wild-type chloroplasts. ALB4 is required for proper chloroplast biogenesis.","AT1G10950","TMN1",575.06,-0.90704,0.11907,-7.618,{"v":2.58e-14,"d":"2.58E-14"},{"v":4.79e-13,"d":"4.79E-13"},"full_name=transmembrane nine 1. transmembrane nine 1. Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.","AT4G04810","MSRB4",949.06,-0.82987,0.090733,-9.1463,{"v":5.89e-20,"d":"5.89E-20"},{"v":1.06e-18,"d":"1.06E-18"},"full_name=methionine sulfoxide reductase B4. methionine sulfoxide reductase B4.","AT3G15450",null,681.63,1.2086,0.17381,6.9536,{"v":3.56e-12,"d":"3.56E-12"},{"v":6.24e-11,"d":"6.24E-11"},"aluminum induced protein with YGL and LRDR motifs."]
["AT3G45970","EXLA1",417.22,-1.092,0.16809,-6.4968,{"v":8.2e-11,"d":"8.20E-11"},{"v":1.62E-9,"d":"1.62E-09"},"full_name=expansin-like A1. expansin-like A1. member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)","AT2G47780","LDAP2",28.292,3.5395,0.51308,6.8985,{"v":5.25e-12,"d":"5.25E-12"},1.01E-10,"Rubber elongation factor protein (REF).","AT5G60210","RIP5",83.366,-2.2472,0.29505,-7.6162,2.61E-14,{"v":4.86e-13,"d":"4.86E-13"},"full_name=ROP interactive partner 5. ROP interactive partner 5. Encodes RIP5 (ROP interactive partner 5), a putative Rho protein effector, interacting specifically with the active form of ROPs (Rho proteins of plants).","AT4G13340","LRX3",55.705,-3.5339,0.3865,-9.1435,{"v":6.05e-20,"d":"6.05E-20"},1.09E-18,"full_name=leucine-rich repeat/extensin 3. Leucine-rich repeat (LRR) family protein.","AT1G64720","CP5",2305.9,0.43625,0.062755,6.9516,{"v":3.61e-12,"d":"3.61E-12"},{"v":6.32e-11,"d":"6.32E-11"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein. membrane related protein CP5"]
["AT5G03610",null,145.08,1.4122,0.21752,6.4923,{"v":8.45e-11,"d":"8.45E-11"},{"v":1.67E-9,"d":"1.67E-09"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT2G41290","SSL2",588.54,-0.94493,0.13698,-6.8985,{"v":5.26e-12,"d":"5.26E-12"},1.01E-10,"full_name=strictosidine synthase-like 2. strictosidine synthase-like 2. Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.","AT3G52230",null,2935,1.0107,0.13272,7.6154,{"v":2.63e-14,"d":"2.63E-14"},{"v":4.88e-13,"d":"4.88E-13"},"hypothetical protein.","AT1G64660","MGL",2073.7,-0.78283,0.085631,-9.1419,{"v":6.14e-20,"d":"6.14E-20"},{"v":1.1e-18,"d":"1.10E-18"},"full_name=methionine gamma-lyase. methionine gamma-lyase. Encodes a functional methionine gamma-lyase, a cytosolic enzyme catalyzes the degradation of methionine into methanethiol, alpha-ketobutyrate and ammonia. The catabolism of excess methionine is important to methionine homeostasis.","AT3G50410","OBP1",106.76,1.5423,0.22191,6.9499,3.65E-12,{"v":6.39e-11,"d":"6.39E-11"},"full_name=OBF binding protein 1. OBF binding protein 1. Arabidopsis Dof protein containing a single 51-amino acid zinc finger DNA-binding domain, which may play an important roles in plant growth and development."]
["AT5G27150","NHX1",394.18,0.81144,0.12509,6.487,8.76E-11,{"v":1.73E-9,"d":"1.73E-09"},"full_name=Na+/H+ exchanger 1. Na+/H+ exchanger 1. Encodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development.","AT5G28640","AN3",574.72,-0.80986,0.11754,-6.8902,{"v":5.57e-12,"d":"5.57E-12"},{"v":1.07e-10,"d":"1.07E-10"},"full_name=ANGUSTIFOLIA 3. SSXT family protein. Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors.","AT1G78830",null,53.486,2.4399,0.3204,7.6149,2.64E-14,{"v":4.89e-13,"d":"4.89E-13"},"Curculin-like (mannose-binding) lectin family protein.","AT1G19700","BEL10",98.167,-3.1719,0.34697,-9.1418,{"v":6.14e-20,"d":"6.14E-20"},{"v":1.1e-18,"d":"1.10E-18"},"full_name=BEL1-like homeodomain 10. BEL1-like homeodomain 10. Encodes a member of the BEL family of homeodomain proteins. Its interaction with PLP (PAS/LOV PROTEIN) is diminished by blue light.","AT3G48115",null,313.56,1.1839,0.17049,6.9442,{"v":3.81e-12,"d":"3.81E-12"},{"v":6.65e-11,"d":"6.65E-11"},"other_RNA. Unknown gene"]
["AT1G31310",null,61.236,-1.9402,0.29973,-6.4731,{"v":9.6e-11,"d":"9.60E-11"},{"v":1.89e-09,"d":"1.89E-09"},"hydroxyproline-rich glycoprotein family protein.","AT1G12080",null,109.03,-1.6761,0.24345,-6.8849,5.78E-12,1.11E-10,"Vacuolar calcium-binding protein-like protein.","AT1G19530",null,171.9,2.3511,0.30875,7.6147,2.64E-14,{"v":4.9e-13,"d":"4.90E-13"},"DNA polymerase epsilon catalytic subunit A.","AT1G30230","eEF-1Bb1",1488.8,0.81372,0.089155,9.1271,{"v":7.04e-20,"d":"7.04E-20"},1.26E-18,"full_name=eukaryotic elongation factor 1B beta 1. translation elongation factor EF1B/ribosomal protein S6 family protein. Encodes a guanine nucleotide exchange factor that plays an important role in translation elongation. It is localized in the plasma membrane and cytosol. Mutants display ectopic lignin deposition as well as cell expansion defects","AT5G58350","WNK4",528.15,0.71244,0.10261,6.9434,{"v":3.83e-12,"d":"3.83E-12"},{"v":6.68e-11,"d":"6.68E-11"},"full_name=with no lysine (K) kinase 4. with no lysine (K) kinase 4. Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms."]
["AT5G63470","NF-YC4",78.663,-1.6659,0.25756,-6.4681,{"v":9.93e-11,"d":"9.93E-11"},{"v":1.96e-09,"d":"1.96E-09"},"full_name=nuclear factor Y, subunit C4. nuclear factor Y, subunit C4.","AT5G65640","bHLH093",282.89,-1.0396,0.15108,-6.8813,5.93E-12,1.13E-10,"full_name=beta HLH protein 93. beta HLH protein 93.","AT5G54250","CNGC4",145.75,-1.6058,0.21094,-7.6124,{"v":2.69e-14,"d":"2.69E-14"},4.98E-13,"full_name=cyclic nucleotide-gated cation channel 4. cyclic nucleotide-gated cation channel 4. member of Cyclic nucleotide gated channel family, downstream component of the signaling pathways leading to HR resistance. mutant plants exhibit gene-for-gene disease resistance against avirulent Pseudomonas syringae despite the near-complete absence of the hypersensitive response (HR). Salicylic acid accumulation in dnd2 mutants is completely PAD4-independent.","AT4G33140",null,75.629,-2.5704,0.28173,-9.1236,{"v":7.27e-20,"d":"7.27E-20"},{"v":1.3E-18,"d":"1.30E-18"},"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein.","AT3G46590","TRFL1",444.32,-0.96962,0.13977,-6.9374,{"v":3.99e-12,"d":"3.99E-12"},{"v":6.96e-11,"d":"6.96E-11"},"full_name=TRF-like 1. TRF-like 1. Encodes a protein that specifically binds plant telomeric DNA (TTTAGGG)n repeats. Involved in bending DNA. Expressed throughout the plant with highest levels in flowers."]
["AT1G09155","PP2-B15",351.58,0.89989,0.13919,6.4651,1.01E-10,{"v":1.99E-9,"d":"1.99E-09"},"full_name=phloem protein 2-B15. phloem protein 2-B15.","AT3G09500",null,1050.3,-0.71437,0.10397,-6.8707,6.39E-12,{"v":1.22e-10,"d":"1.22E-10"},"Ribosomal L29 family protein.","AT3G14560",null,215.75,-1.478,0.19427,-7.608,{"v":2.78e-14,"d":"2.78E-14"},{"v":5.14e-13,"d":"5.14E-13"},"hypothetical protein.","AT1G76680","OPR1",98.994,-2.6464,0.29036,-9.114,7.94E-20,1.42E-18,"full_name=12-oxophytodienoate reductase 1. 12-oxophytodienoate reductase 1. Encodes a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. Predicted to be a cytosolic protein.","AT5G05220",null,1370.1,0.72252,0.10435,6.9243,{"v":4.38e-12,"d":"4.38E-12"},{"v":7.63e-11,"d":"7.63E-11"},"hypothetical protein."]
["AT4G14540","NF-YB3",27.379,-3.254,0.50345,-6.4633,1.02E-10,{"v":2.01e-09,"d":"2.01E-09"},"full_name=nuclear factor Y, subunit B3. nuclear factor Y, subunit B3.","AT2G41530","SFGH",468.71,-0.82942,0.12073,-6.87,{"v":6.42e-12,"d":"6.42E-12"},{"v":1.22e-10,"d":"1.22E-10"},"full_name=S-formylglutathione hydrolase. S-formylglutathione hydrolase. Encodes a protein with S-formylglutathione hydrolase activity.","AT1G70700","TIFY7",288.14,-1.5426,0.20277,-7.6079,2.79E-14,{"v":5.14e-13,"d":"5.14E-13"},"TIFY domain/Divergent CCT motif family protein. JAZ9 is a protein presumed to be involved in jasmonate signaling. JAZ9 transcript levels rise in response to a jasmonate stimulus. JAZ9 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. The Jas domain appears to be important for JAZ9-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.","AT3G16490","IQD26",86.527,-2.3738,0.26111,-9.0913,9.79E-20,{"v":1.75e-18,"d":"1.75E-18"},"full_name=IQ-domain 26. IQ-domain 26.","AT5G03700",null,175.09,1.3121,0.1895,6.9241,{"v":4.39e-12,"d":"4.39E-12"},{"v":7.63e-11,"d":"7.63E-11"},"D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein."]
["AT3G13330","PA200",883.72,0.65241,0.10095,6.4628,{"v":1.03e-10,"d":"1.03E-10"},{"v":2.02e-09,"d":"2.02E-09"},"full_name=proteasome activating protein 200. proteasome activating protein 200. Encodes a protein that interacts with the 26S proteasome. Mutants are phenotypically indistinguishable from wild type plants under a variety of growth conditions. Protein levels increase upon exposure of seedlings to MG132, a specific, potent, reversible, and cell-permeable proteasome inhibitor.","AT2G32210","ATHCYSTM6",53.993,2.1651,0.31525,6.868,{"v":6.51e-12,"d":"6.51E-12"},{"v":1.24e-10,"d":"1.24E-10"},"cysteine-rich/transmembrane domain A-like protein.","AT2G33770","PHO2",3481.4,0.98834,0.12998,7.6038,{"v":2.88e-14,"d":"2.88E-14"},{"v":5.31e-13,"d":"5.31E-13"},"full_name=phosphate 2. phosphate 2. Encodes a ubiquitin-conjugating E2 enzyme. UBC24 mRNA accumulation is suppressed by miR399f, miR399b and miR399c. Involved in phosphate starvation response and mediates degradation of PHO1 and PHT1s at endomembrane. Its expression is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots.","AT5G10980","H3.3",959.27,-0.98818,0.10873,-9.0882,{"v":1.01e-19,"d":"1.01E-19"},{"v":1.8e-18,"d":"1.80E-18"},"Histone superfamily protein.","AT5G67490","SDHAF4",700.81,-0.94121,0.13595,-6.923,{"v":4.42e-12,"d":"4.42E-12"},{"v":7.68e-11,"d":"7.68E-11"},"succinate dehydrogenase assembly factor."]
["AT3G26770",null,225.36,1.1497,0.17798,6.4596,1.05E-10,{"v":2.06e-09,"d":"2.06E-09"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT5G10560",null,136.6,-1.3007,0.1896,-6.8605,{"v":6.86e-12,"d":"6.86E-12"},{"v":1.3e-10,"d":"1.30E-10"},"Glycosyl hydrolase family protein.","AT3G60160","ABCC9",183.95,-1.331,0.17512,-7.6008,2.94E-14,{"v":5.42e-13,"d":"5.42E-13"},"full_name=ATP-binding cassette C9. multidrug resistance-associated protein 9. member of MRP subfamily","AT5G15970","KIN2",586.46,-4.4628,0.4916,-9.0781,1.11E-19,{"v":1.97e-18,"d":"1.97E-18"},"stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6). Encodes a gene that can be induced by cold and abscisic acid and may be involved in cold acclimation and salt tolerance.","AT4G05530","IBR1",638.38,-0.69458,0.10043,-6.916,{"v":4.65e-12,"d":"4.65E-12"},{"v":8.07e-11,"d":"8.07E-11"},"full_name=indole-3-butyric acid response 1. indole-3-butyric acid response 1. Encodes a peroxisomal member of the short-chain dehydrogenase/reductase (SDR) family of enzymes. Loss of IBR1 function causes increased resistance to indole-3-butyric acid without affecting plant responses to IAA, NAA, and 2,4-D. This enzyme may be responsible for catalyzing a dehydrogenation step in the beta-oxidation-like conversion of IBA to IAA."]
["AT2G29140","PUM3",794.62,0.71177,0.11026,6.4555,1.08E-10,{"v":2.11E-9,"d":"2.11E-09"},"full_name=pumilio 3. pumilio 3. Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.","AT3G46660","UGT76E12",28.223,3.5391,0.51642,6.853,{"v":7.23e-12,"d":"7.23E-12"},{"v":1.37e-10,"d":"1.37E-10"},"full_name=UDP-glucosyl transferase 76E12. UDP-glucosyl transferase 76E12.","AT5G19390","PHGAP2",211.91,-1.2557,0.16527,-7.5979,{"v":3.01e-14,"d":"3.01E-14"},{"v":5.54e-13,"d":"5.54E-13"},"Rho GTPase activation protein (RhoGAP) with PH domain-containing protein. Encodes a protein with similarity to REN1, a Rho GTPase activating protein.","AT1G04040",null,72.679,-2.6542,0.29243,-9.0764,{"v":1.12e-19,"d":"1.12E-19"},{"v":2e-18,"d":"2.00E-18"},"HAD superfamily, subfamily IIIB acid phosphatase.","AT3G61420",null,305.57,-0.91429,0.13231,-6.9104,{"v":4.83e-12,"d":"4.83E-12"},{"v":8.38e-11,"d":"8.38E-11"},"BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins)."]
["AT1G61720","BAN",169.14,-1.1445,0.17735,-6.4535,1.09E-10,{"v":2.14e-09,"d":"2.14E-09"},"full_name=BANYULS. NAD(P)-binding Rossmann-fold superfamily protein. Negative regulator of flavonoid biosynthesis, mutants accumulate flavonoid pigments in their seed coat, putative oxidoreductase. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium.","AT1G49730",null,651.39,-0.87083,0.12713,-6.8502,{"v":7.38e-12,"d":"7.38E-12"},{"v":1.4e-10,"d":"1.40E-10"},"Protein kinase superfamily protein.","AT1G35510",null,51.673,-2.785,0.36685,-7.5917,{"v":3.16e-14,"d":"3.16E-14"},{"v":5.81e-13,"d":"5.81E-13"},"O-fucosyltransferase family protein.","AT3G28910","MYB30",98.076,-2.5111,0.27667,-9.0761,1.13E-19,{"v":2e-18,"d":"2.00E-18"},"full_name=myb domain protein 30. myb domain protein 30. transcription factor myb homologue","AT1G24735",null,1565.1,-0.57338,0.082974,-6.9103,{"v":4.84e-12,"d":"4.84E-12"},{"v":8.38e-11,"d":"8.38E-11"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein."]
["AT1G04490",null,111.25,1.3716,0.21266,6.4497,1.12E-10,{"v":2.19e-09,"d":"2.19E-09"},"hypothetical protein (DUF3527).","AT1G24430",null,88.395,1.7281,0.2524,6.8466,{"v":7.56e-12,"d":"7.56E-12"},1.43E-10,"HXXXD-type acyl-transferase family protein.","AT3G03250","UGP1",208.61,-1.3137,0.17306,-7.5907,{"v":3.18e-14,"d":"3.18E-14"},{"v":5.84e-13,"d":"5.84E-13"},"full_name=UDP-GLUCOSE PYROPHOSPHORYLASE 1. UDP-GLUCOSE PYROPHOSPHORYLASE 1. Is thought to encode a cytosolic UDP-glucose pyrophosphorylase with strong similarity to potato UTP--glucose-1-phosphate uridylyltransferase. Downregulated by flooding.","AT2G36350","AGC1-9",488.89,1.0372,0.11438,9.0688,{"v":1.2e-19,"d":"1.20E-19"},{"v":2.14e-18,"d":"2.14E-18"},"Protein kinase superfamily protein.","AT1G17490",null,203.03,-1.2649,0.18309,-6.9085,{"v":4.9e-12,"d":"4.90E-12"},{"v":8.47e-11,"d":"8.47E-11"},"epidermal patterning factor-like protein."]
["AT3G08040","FRD3",651.22,0.79885,0.12392,6.4464,1.15E-10,{"v":2.24e-09,"d":"2.24E-09"},"full_name=FERRIC REDUCTASE DEFECTIVE 3. MATE efflux family protein. Encodes a member of the MATE (multidrug and toxin efflux family), expressed in roots but not shoots. Mutants accumulate excess iron, manganese and zinc, and express root Fe(III) chelatase activity even under iron sufficiency conditions. FRD3 is likely to function in root xylem loading of an iron chelator or other factor necessary for efficient iron uptake out of the xylem or apoplastic space and into leaf cells.","AT5G50315",null,523.14,0.9175,0.13407,6.8435,{"v":7.73e-12,"d":"7.73E-12"},{"v":1.46e-10,"d":"1.46E-10"},"transposable_element_gene.","AT5G63790","NAC102",165.1,1.3703,0.18053,7.5906,{"v":3.18e-14,"d":"3.18E-14"},{"v":5.84e-13,"d":"5.84E-13"},"full_name=NAC domain containing protein 102. NAC domain containing protein 102. Encodes a member of the NAC family of transcription factors. ANAC102 appears to have a role in mediating response to low oxygen stress (hypoxia) in germinating seedlings.","AT3G26100",null,522.09,-1.3824,0.15264,-9.0566,1.35E-19,2.39E-18,"Regulator of chromosome condensation (RCC1) family protein.","AT1G20696","HMGB3",1436.2,-0.90956,0.13169,-6.9069,{"v":4.95e-12,"d":"4.95E-12"},{"v":8.56e-11,"d":"8.56E-11"},"full_name=high mobility group B3. high mobility group B3. Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha."]
["AT2G35370","GDCH",29.238,-5.8019,0.90049,-6.4431,{"v":1.17e-10,"d":"1.17E-10"},{"v":2.28E-9,"d":"2.28E-09"},"full_name=glycine decarboxylase complex H. glycine decarboxylase complex H. Encodes glycine decarboxylase complex H protein. Involved in photorespiration.","AT5G05740","EGY2",70.509,-1.8778,0.2744,-6.8434,{"v":7.74e-12,"d":"7.74E-12"},{"v":1.46e-10,"d":"1.46E-10"},"full_name=ethylene-dependent gravitropism-deficient and yellow-green-like 2. ethylene-dependent gravitropism-deficient and yellow-green-like 2. S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442%E2%80%93454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171%E2%80%93179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria.","AT1G01490","ATHMP01",343.39,-1.2912,0.17011,-7.5902,{"v":3.2e-14,"d":"3.20E-14"},{"v":5.86e-13,"d":"5.86E-13"},"Heavy metal transport/detoxification superfamily protein.","AT2G25737",null,55.257,-5.4911,0.60681,-9.0491,{"v":1.44e-19,"d":"1.44E-19"},{"v":2.55e-18,"d":"2.55E-18"},"Sulfite exporter TauE/SafE family protein.","AT1G24580",null,138.71,1.4895,0.21567,6.9065,4.97E-12,{"v":8.58e-11,"d":"8.58E-11"},"RING/U-box superfamily protein."]
["AT1G04410","c-NAD-MDH1",1816.7,-0.66023,0.10248,-6.4424,{"v":1.18e-10,"d":"1.18E-10"},{"v":2.29e-09,"d":"2.29E-09"},"full_name=cytosolic-NAD-dependent malate dehydrogenase 1. Lactate/malate dehydrogenase family protein. predicted to encode a cytosolic malate dehydrogenase.","AT5G06839","TGA10",27.534,3.4999,0.5115,6.8424,{"v":7.79e-12,"d":"7.79E-12"},{"v":1.47e-10,"d":"1.47E-10"},"full_name=TGACG (TGA) motif-binding protein 10. bZIP transcription factor family protein.","AT3G07255",null,36.94,3.0598,0.40322,7.5884,3.24E-14,5.93E-13,"nuclear transport factor 2/RNA recognition motif protein.","AT1G66460",null,54.922,-5.9198,0.65423,-9.0485,1.45E-19,{"v":2.57e-18,"d":"2.57E-18"},"Protein kinase superfamily protein.","AT4G08500","MEKK1",491.5,0.75309,0.10905,6.9061,{"v":4.98e-12,"d":"4.98E-12"},{"v":8.59e-11,"d":"8.59E-11"},"full_name=MAPK/ERK kinase kinase 1. MAPK/ERK kinase kinase 1. Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1."]
["AT2G20750","EXPB1",303.52,-1.3936,0.21645,-6.4382,1.21E-10,{"v":2.35e-09,"d":"2.35E-09"},"full_name=expansin B1. expansin B1. member of BETA-EXPANSINS. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)","AT2G44460","BGLU28",33.591,8.5656,1.252,6.8413,{"v":7.85e-12,"d":"7.85E-12"},{"v":1.48e-10,"d":"1.48E-10"},"full_name=beta glucosidase 28. beta glucosidase 28.","AT1G32710",null,745.67,1.3842,0.18248,7.5854,{"v":3.31e-14,"d":"3.31E-14"},{"v":6.06e-13,"d":"6.06E-13"},"Cytochrome c oxidase, subunit Vib family protein.","AT2G24940","MAPR2",940.94,0.82958,0.091685,9.0482,1.45E-19,{"v":2.57e-18,"d":"2.57E-18"},"full_name=membrane-associated progesterone binding protein 2. membrane-associated progesterone binding protein 2.","AT4G36130",null,531.25,0.78988,0.11443,6.9029,{"v":5.1e-12,"d":"5.10E-12"},{"v":8.78e-11,"d":"8.78E-11"},"Ribosomal protein L2 family."]
["AT5G14230",null,37.017,-2.5036,0.38894,-6.437,{"v":1.22e-10,"d":"1.22E-10"},{"v":2.37e-09,"d":"2.37E-09"},"ankyrin.","AT2G28470","BGAL8",666.78,-0.72033,0.10531,-6.8398,{"v":7.93e-12,"d":"7.93E-12"},1.49E-10,"full_name=beta-galactosidase 8. beta-galactosidase 8. putative beta-galactosidase (BGAL8 gene)","AT3G07770","Hsp89.1",586.23,1.0098,0.13325,7.5783,{"v":3.5e-14,"d":"3.50E-14"},{"v":6.4E-13,"d":"6.40E-13"},"full_name=HEAT SHOCK PROTEIN 89.1. HEAT SHOCK PROTEIN 89.1.","AT2G02990","RNS1",1075.7,-5.4919,0.60716,-9.0454,{"v":1.49e-19,"d":"1.49E-19"},{"v":2.63e-18,"d":"2.63E-18"},"full_name=ribonuclease 1. ribonuclease 1. Encodes a member of the ribonuclease T2 family that responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in roots.","AT5G38780",null,536.56,-1.3865,0.20122,-6.8906,{"v":5.56e-12,"d":"5.56E-12"},{"v":9.56e-11,"d":"9.56E-11"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein."]
["AT2G23640","RTNLB13",2012.3,0.64974,0.10107,6.4283,{"v":1.29e-10,"d":"1.29E-10"},{"v":2.51e-09,"d":"2.51E-09"},"full_name=Reticulan like protein B13. Reticulan like protein B13. Encodes RTNLB13, a reticulon protein integral to the endoplasmic reticulum (ER) membrane that have the ability to shape the ER into tubules.","AT3G10130","SOUL4",285.22,0.98721,0.14478,6.8184,{"v":9.2e-12,"d":"9.20E-12"},1.73E-10,"SOUL heme-binding family protein.","AT5G57710","SMAX1",614.88,0.94018,0.12409,7.5767,3.55E-14,{"v":6.47e-13,"d":"6.47E-13"},"Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein. SMAX1 (SUPPRESSOR OF MAX2 1) is a member of an eight-gene family in Arabidopsis that has weak similarity to AtHSP101, a ClpB chaperonin required for thermotolerance. SMAX1 is an important component of KAR/SL signaling during seed germination and seedling growth, but is not necessary for all MAX2-dependent responses.","AT2G29980","FAD3",1429.5,-3.2199,0.35615,-9.0408,1.56E-19,{"v":2.74e-18,"d":"2.74E-18"},"full_name=fatty acid desaturase 3. fatty acid desaturase 3. Endoplasmic reticulum enzyme responsible for the synthesis of 18:3 fatty acids from phospholipids. Uses cytochrome b5 as electron donor.","AT1G66760",null,52.34,3.0489,0.44257,6.8891,{"v":5.61e-12,"d":"5.61E-12"},{"v":9.65e-11,"d":"9.65E-11"},"MATE efflux family protein."]
["AT2G28420","GLYI8",328.11,1.004,0.15633,6.4225,1.34E-10,{"v":2.6e-09,"d":"2.60E-09"},"full_name=glyoxylase I 8. Lactoylglutathione lyase / glyoxalase I family protein.","AT3G15160",null,160.61,-1.2333,0.18093,-6.8166,{"v":9.32e-12,"d":"9.32E-12"},{"v":1.75e-10,"d":"1.75E-10"},"AP-5 complex subunit zeta-1.","AT4G37550","IAMH1",57.012,-2.4046,0.3175,-7.5735,{"v":3.63e-14,"d":"3.63E-14"},{"v":6.62e-13,"d":"6.62E-13"},"Acetamidase/Formamidase family protein.","AT3G51895","SULTR3;1",453.82,-1.6707,0.18489,-9.0364,{"v":1.62e-19,"d":"1.62E-19"},{"v":2.85e-18,"d":"2.85E-18"},"full_name=sulfate transporter 3;1. sulfate transporter 3;1. Encodes a chloroplast-localized sulfate transporter.","AT3G26560",null,885.39,0.61654,0.089498,6.8889,{"v":5.62e-12,"d":"5.62E-12"},{"v":9.66e-11,"d":"9.66E-11"},"ATP-dependent RNA helicase."]
["AT1G52660",null,34.355,2.6296,0.40945,6.4222,1.34E-10,{"v":2.6e-09,"d":"2.60E-09"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT1G67120","MDN1",322.14,1.045,0.1533,6.8166,{"v":9.32e-12,"d":"9.32E-12"},{"v":1.75e-10,"d":"1.75E-10"},"midasin-like protein. Represents a homolog of the yeast MDN gene, which encodes a non-ribosomal protein involved in the maturation and assembly of the 60S ribosomal subunit. In Arabidopsis, it is essential for female gametogenesis progression.","AT1G04990",null,144.32,-1.6498,0.21785,-7.573,{"v":3.65e-14,"d":"3.65E-14"},6.64E-13,"Zinc finger C-x8-C-x5-C-x3-H type family protein.","AT1G15030",null,475.41,-1.8065,0.20015,-9.0258,{"v":1.78e-19,"d":"1.78E-19"},{"v":3.14e-18,"d":"3.14E-18"},"hypothetical protein (DUF789). Encodes a Cysteine-rich peptide (CRP) family protein","AT1G15930",null,632.61,1.0327,0.14994,6.8875,5.68E-12,{"v":9.74e-11,"d":"9.74E-11"},"Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein."]
["AT1G09470","ATNEAP3",31.894,-2.7987,0.43586,-6.4211,1.35E-10,{"v":2.62e-09,"d":"2.62E-09"},"myosin heavy chain, cardiac protein.","AT5G05480",null,279.78,-0.95876,0.14079,-6.8099,{"v":9.77e-12,"d":"9.77E-12"},{"v":1.83e-10,"d":"1.83E-10"},"Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein.","AT3G10450","SCPL7",1186.3,1.1634,0.15366,7.5711,{"v":3.7E-14,"d":"3.70E-14"},{"v":6.73e-13,"d":"6.73E-13"},"full_name=serine carboxypeptidase-like 7. serine carboxypeptidase-like 7.","AT1G49740",null,277.67,-1.5424,0.17093,-9.0236,1.82E-19,{"v":3.2e-18,"d":"3.20E-18"},"PLC-like phosphodiesterases superfamily protein.","AT3G02470","SAMDC",3487.9,0.48281,0.070113,6.8861,5.73E-12,{"v":9.82e-11,"d":"9.82E-11"},"full_name=S-adenosylmethionine decarboxylase. S-adenosylmethionine decarboxylase. Encodes a S-adenosylmethionine decarboxylase involved in polyamine biosynthesis."]
["AT5G22640","emb1211",327.15,-0.88332,0.13759,-6.4198,1.36E-10,{"v":2.64E-9,"d":"2.64E-09"},"full_name=embryo defective 1211. MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein. EMB1211 is a MORN (multiple membrane occupation and recognition nexus) motif containing protein involved in embryo development and chloroplast biogenesis.","AT3G26290","CYP71B26",881.2,1.0781,0.15858,6.7988,{"v":1.05e-11,"d":"1.05E-11"},{"v":1.98e-10,"d":"1.98E-10"},"full_name=cytochrome P450, family 71, subfamily B, polypeptide 26. cytochrome P450, family 71, subfamily B, polypeptide 26. putative cytochrome P450","AT2G41290","SSL2",222.79,-1.7337,0.22917,-7.565,{"v":3.88e-14,"d":"3.88E-14"},{"v":7.04e-13,"d":"7.04E-13"},"full_name=strictosidine synthase-like 2. strictosidine synthase-like 2. Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.","AT2G33800","EMB3113",175.26,1.6472,0.18257,9.0223,{"v":1.84e-19,"d":"1.84E-19"},{"v":3.23e-18,"d":"3.23E-18"},"full_name=EMBRYO DEFECTIVE 3113. Ribosomal protein S5 family protein.","AT3G19290","ABF4",713.14,-0.61524,0.089424,-6.88,5.98E-12,1.02E-10,"full_name=ABRE binding factor 4. ABRE binding factor 4. bZIP transcription factor with specificity for abscisic acid-responsive elements (ABRE). Mediate ABA-dependent stress responses."]
["AT5G48600","SMC3",24.199,-3.7078,0.57806,-6.4142,1.42E-10,{"v":2.74e-09,"d":"2.74E-09"},"full_name=structural maintenance of chromosome 3. structural maintenance of chromosome 3. member of SMC subfamily","AT4G16155",null,487.09,-0.87114,0.12824,-6.7929,{"v":1.1e-11,"d":"1.10E-11"},{"v":2.06e-10,"d":"2.06E-10"},"dihydrolipoamide dehydrogenase.","AT5G01520","AIRP2",1545.6,1.4179,0.18748,7.5628,{"v":3.94e-14,"d":"3.94E-14"},{"v":7.16e-13,"d":"7.16E-13"},"full_name=ABA Insensitive RING Protein 2. RING/U-box superfamily protein.","AT1G18500","MAML-4",1609.1,0.91853,0.10188,9.0159,1.95E-19,{"v":3.43e-18,"d":"3.43E-18"},"full_name=methylthioalkylmalate synthase-like 4. methylthioalkylmalate synthase-like 4. Encodes an active Arabidopsis isopropylmalate synthase IPMS1. Involved in leucine biosynthesis. Do not participate in the chain elongation of glucosinolates. Expressed constitutively throughout the plant. Loss of IPMS1 can be compensated by a second isopropylmalate synthase gene IPMS2 (At1g74040).","AT2G45570","CYP76C2",180.13,1.2554,0.1825,6.8788,{"v":6.04e-12,"d":"6.04E-12"},{"v":1.03e-10,"d":"1.03E-10"},"full_name=cytochrome P450, family 76, subfamily C, polypeptide 2. cytochrome P450, family 76, subfamily C, polypeptide 2. member of CYP76C"]
["AT3G29320","PHS1",1337.1,-0.86133,0.13436,-6.4109,{"v":1.45e-10,"d":"1.45E-10"},{"v":2.79e-09,"d":"2.79E-09"},"full_name=alpha-glucan phosphorylase 1. Glycosyl transferase, family 35. Encodes a plastidic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for maltooligosaccharides, such as maltoheptaose.","AT2G05310",null,360,-1.3346,0.19648,-6.7926,{"v":1.1e-11,"d":"1.10E-11"},{"v":2.06e-10,"d":"2.06E-10"},"transmembrane protein.","AT1G01180",null,83.252,1.9531,0.25846,7.5568,{"v":4.13e-14,"d":"4.13E-14"},{"v":7.49e-13,"d":"7.49E-13"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT3G17120",null,48.825,-3.8789,0.43026,-9.0152,{"v":1.97e-19,"d":"1.97E-19"},{"v":3.45e-18,"d":"3.45E-18"},"transmembrane protein.","AT1G04210",null,529.9,0.70415,0.10238,6.8774,{"v":6.09e-12,"d":"6.09E-12"},1.04E-10,"Leucine-rich repeat protein kinase family protein. Encodes a putative Raf-related kinase."]
["AT3G08720","S6K2",376.28,0.9202,0.14355,6.4102,{"v":1.45e-10,"d":"1.45E-10"},{"v":2.8e-09,"d":"2.80E-09"},"full_name=serine/threonine protein kinase 2. serine/threonine protein kinase 2. Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.","AT1G15050","IAA34",188.97,1.2134,0.17876,6.7881,{"v":1.14e-11,"d":"1.14E-11"},{"v":2.12e-10,"d":"2.12E-10"},"full_name=indole-3-acetic acid inducible 34. indole-3-acetic acid inducible 34. Belongs to auxin inducible gene family.","AT3G04940","CYSD1",51.35,-2.8596,0.37847,-7.5557,{"v":4.16e-14,"d":"4.16E-14"},{"v":7.54e-13,"d":"7.54E-13"},"full_name=cysteine synthase D1. cysteine synthase D1. Encodes cysteine synthase CysD1.","AT2G01080",null,117.81,1.9771,0.21956,9.005,2.16E-19,3.77E-18,"Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family.","AT3G55270","MKP1",633.85,0.67347,0.097942,6.8762,{"v":6.15e-12,"d":"6.15E-12"},1.05E-10,"full_name=mitogen-activated protein kinase phosphatase 1. mitogen-activated protein kinase phosphatase 1. Encodes MAP kinase phosphatase 1 (MKP1). Loss of MKP1 results in hypersensitivity to acute UV-B stress, but without impairing UV-B acclimation."]
["AT1G32560","AtLEA4-1",2040.5,0.68771,0.10731,6.4084,{"v":1.47e-10,"d":"1.47E-10"},{"v":2.83e-09,"d":"2.83E-09"},"full_name=Late Embryogenesis Abundant 4-1. Late embryogenesis abundant protein, group 1 protein. Encodes LEA4-1, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment.","AT5G44670","GALS2",146.54,1.3077,0.19285,6.7812,{"v":1.19e-11,"d":"1.19E-11"},{"v":2.22e-10,"d":"2.22E-10"},"full_name=galactan synthase 2. glycosyltransferase family protein (DUF23).","AT1G63690","SPPL2",335.74,-1.1535,0.15268,-7.5546,{"v":4.2e-14,"d":"4.20E-14"},{"v":7.6e-13,"d":"7.60E-13"},"full_name=SIGNAL PEPTIDE PEPTIDASE-LIKE 2. SIGNAL PEPTIDE PEPTIDASE-LIKE 2.","AT1G77100",null,337.2,-1.5704,0.17451,-8.9988,{"v":2.28e-19,"d":"2.28E-19"},{"v":3.99e-18,"d":"3.99E-18"},"peroxidase superfamily protein.","AT1G21460","SWEET1",926.95,0.81892,0.11913,6.8743,{"v":6.23e-12,"d":"6.23E-12"},1.06E-10,"Nodulin MtN3 family protein."]
["AT3G47750","ABCA4",492.87,0.76723,0.11973,6.4083,{"v":1.47e-10,"d":"1.47E-10"},{"v":2.83e-09,"d":"2.83E-09"},"full_name=ATP-binding cassette A4. ATP binding cassette subfamily A4. member of ATH subfamily","AT2G29650","PHT4;1",160.05,1.3104,0.19332,6.7784,{"v":1.21e-11,"d":"1.21E-11"},2.26E-10,"full_name=phosphate transporter 4;1. phosphate transporter 4;1. Encodes an inorganic phosphate transporter (PHT4;1) that is localized to the thylakoid membrane.","AT3G29190",null,54.238,-6.6016,0.87409,-7.5525,{"v":4.27e-14,"d":"4.27E-14"},{"v":7.72e-13,"d":"7.72E-13"},"Terpenoid cyclases/Protein prenyltransferases superfamily protein.","AT5G24316",null,178.26,-6.5519,0.72852,-8.9935,{"v":2.39e-19,"d":"2.39E-19"},{"v":4.18e-18,"d":"4.18E-18"},"proline-rich family protein.","AT4G36980",null,1297.1,-0.51324,0.074667,-6.8738,{"v":6.25e-12,"d":"6.25E-12"},1.06E-10,"CLK4-associating serine/arginine-rich protein."]
["AT4G03110","RBP-DR1",257.76,-1.1107,0.17357,-6.3992,1.56E-10,{"v":3E-9,"d":"3.00E-09"},"full_name=RNA-binding protein-defense related 1. RNA-binding protein-defense related 1. Encodes a putative RNA-binding protein that is located in the cytoplasm and is involved in the hypersensitive response and positively regulates salicylic acid-mediated immunity.","AT2G46820","PSI-P",136.1,-1.2939,0.19089,-6.7781,{"v":1.22e-11,"d":"1.22E-11"},{"v":2.27e-10,"d":"2.27E-10"},"full_name=photosystem I P subunit. photosystem I P subunit. Encodes the P subunit of Photosystem I. About 25% of the TMP14 pool appeared to be phosphorylated, and this ratio is not affected by light. Contains seven phosphorylation sites on threonine residue and chloroplast targeting signal. Located in the proximity of PSI-L, -H and -O subunits.","AT4G33467",null,50.73,6.8351,0.90516,7.5513,{"v":4.31e-14,"d":"4.31E-14"},{"v":7.78e-13,"d":"7.78E-13"},"hypothetical protein.","AT1G02120","VAD1",799.99,0.90766,0.10094,8.9918,{"v":2.43e-19,"d":"2.43E-19"},{"v":4.24e-18,"d":"4.24E-18"},"full_name=VASCULAR ASSOCIATED DEATH1. GRAM domain family protein. Encodes VAD1 (Vascular Associated Death1), a regulator of cell death and defense responses in vascular tissues. VAD1 is a putative membrane associated protein and contains a GRAM domain. vad1 is a lesion mimic mutant that exhibits light conditional appearance of propagative HR (hypersensitive response)-like lesions along the vascular system.","AT1G77930","DJC65",564.68,-0.69764,0.10149,-6.8736,{"v":6.26e-12,"d":"6.26E-12"},1.06E-10,"Chaperone DnaJ-domain superfamily protein."]
["AT5G15970","KIN2",2078.8,1.2522,0.19568,6.3991,1.56E-10,{"v":3E-9,"d":"3.00E-09"},"stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6). Encodes a gene that can be induced by cold and abscisic acid and may be involved in cold acclimation and salt tolerance.","AT4G21020",null,13598,0.74077,0.10932,6.7762,1.23E-11,{"v":2.29e-10,"d":"2.29E-10"},"Late embryogenesis abundant protein (LEA) family protein.","AT5G62530","ALDH12A1",292.57,-1.077,0.14264,-7.5506,{"v":4.33e-14,"d":"4.33E-14"},7.81E-13,"full_name=aldehyde dehydrogenase 12A1. aldehyde dehydrogenase 12A1. Encodes mitochondrial Delta-pyrroline-5- carboxylate dehydrogenase. Involved in the catabolism of proline to glutamate. Involved in protection from proline toxicity. Induced at pathogen infection sites. P5CDH and SRO5 (an overlapping gene in the sense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.","AT4G26120",null,212.32,1.5335,0.17057,8.9905,{"v":2.46e-19,"d":"2.46E-19"},{"v":4.29e-18,"d":"4.29E-18"},"Ankyrin repeat family protein / BTB/POZ domain-containing protein.","AT5G42290",null,1555.4,-0.7774,0.11311,-6.8729,{"v":6.29e-12,"d":"6.29E-12"},{"v":1.07e-10,"d":"1.07E-10"},"transcription activator-like protein."]
["AT3G25860","LTA2",914.34,-0.76218,0.11917,-6.3959,{"v":1.6e-10,"d":"1.60E-10"},{"v":3.06e-09,"d":"3.06E-09"},"2-oxoacid dehydrogenases acyltransferase family protein. Nuclear encoded dihydrolipoamide S-acetyltransferase (LTA2) that encodes teh Pyruvate Decarboxylase E2 subunit. Mutant has embryo defect.","AT1G68060","MAP70-1",331.96,-0.9351,0.13802,-6.775,1.24E-11,2.31E-10,"full_name=microtubule-associated proteins 70-1. microtubule-associated proteins 70-1. Encodes a microtubule associated protein (MAP70-1). Expressed in all tissues.","AT2G44990","CCD7",49.917,9.267,1.2274,7.5501,{"v":4.35e-14,"d":"4.35E-14"},7.83E-13,"full_name=carotenoid cleavage dioxygenase 7. carotenoid cleavage dioxygenase 7. More Axillary Branching; carotenoid cleavage dioxygenases.","AT4G09730","RH39",337.2,1.3523,0.15046,8.9879,{"v":2.52e-19,"d":"2.52E-19"},{"v":4.39e-18,"d":"4.39E-18"},"full_name=RH39. RH39. Encodes RH39, a DEAD-box protein involved in the introduction of the hidden break into the 23S rRNA in the chloroplasts. Recombinant RH39 binds to the 23S rRNA in a segment adjacent to the stem-loop creating the hidden break target loop in a sequence-dependent manner. Has ATP-hydrolyzing activity at a Kcat of 5.3 /min in the presence of rRNA sequence. Mutants have drastically reduced level of level of ribulose 1,5-bisphosphate carboxylase/oxygenase.","AT5G19180","ECR1",349.36,0.88364,0.12857,6.8726,{"v":6.3e-12,"d":"6.30E-12"},{"v":1.07e-10,"d":"1.07E-10"},"full_name=E1 C-terminal related 1. E1 C-terminal related 1. Encodes a subunit of a RUB-activating enzyme analogous to the E1 ubiquitin-activating enzyme. ECR1 functions as a heterodimer with AXR1 to activate RUB, a ubiquitin-related protein."]
["AT3G06630",null,42.736,2.2177,0.34683,6.3943,{"v":1.61e-10,"d":"1.61E-10"},{"v":3.09e-09,"d":"3.09E-09"},"protein kinase family protein.","AT3G25690","CHUP1",50.493,-2.275,0.33582,-6.7744,1.25E-11,2.32E-10,"full_name=CHLOROPLAST UNUSUAL POSITIONING 1. Hydroxyproline-rich glycoprotein family protein. actin binding protein required for normal chloroplast positioning","AT5G41410","BEL1",149.63,-1.9311,0.25592,-7.5457,{"v":4.5e-14,"d":"4.50E-14"},{"v":8.09e-13,"d":"8.09E-13"},"full_name=BELL 1. POX (plant homeobox) family protein. Homeodomain protein required for ovule identity.Loss of function mutations show homeotic conversion of integuments to carpels.Forms heterodimers with STM and KNAT1. Interacts with AG-SEP heterodimers is thought to restrict WUS expression. BEL interacts with MADS box dimers composed of SEP1(or SEP3) and AG, SHP1, SHP2 and STK. The interaction of BEL1 with AG-SEP3 is required for proper integument development and specification of integument identity.","AT1G77120","ADH1",5275.5,-1.0735,0.11949,-8.9837,{"v":2.62e-19,"d":"2.62E-19"},{"v":4.55e-18,"d":"4.55E-18"},"full_name=alcohol dehydrogenase 1. alcohol dehydrogenase 1. Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.","AT2G29550","TUB7",139.06,1.4019,0.204,6.8717,6.34E-12,1.08E-10,"full_name=tubulin beta-7 chain. tubulin beta-7 chain. Encodes a beta-tubulin that is expressed in leaves, roots and flowers."]
["AT5G60760",null,2594.8,0.64371,0.10072,6.3907,1.65E-10,{"v":3.16e-09,"d":"3.16E-09"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT3G53480","ABCG37",165.26,2.0104,0.29698,6.7694,1.29E-11,{"v":2.4E-10,"d":"2.40E-10"},"full_name=ATP-binding cassette G37. pleiotropic drug resistance 9. Negative regulator of auxin polar transport inhibitors. ABCG37 regulates auxin distribution and homeostasis in roots by excluding IBA from the root apex, but does not act directly in basipetal transport. ABCG37 and ABCG36 act redundantly at outermost root plasma membranes and, transport IBA out of the cells. Also involved in root transmembrane secretion of fluorescent phenolics involved in Fe uptake.","AT5G14500",null,259.43,-1.3441,0.17814,-7.5454,{"v":4.51e-14,"d":"4.51E-14"},{"v":8.1e-13,"d":"8.10E-13"},"aldose 1-epimerase family protein.","AT5G06839","TGA10",276.48,1.2627,0.14057,8.9824,{"v":2.65e-19,"d":"2.65E-19"},{"v":4.6e-18,"d":"4.60E-18"},"full_name=TGACG (TGA) motif-binding protein 10. bZIP transcription factor family protein.","AT5G23850",null,340.75,-0.87001,0.12661,-6.8714,{"v":6.36e-12,"d":"6.36E-12"},1.08E-10,"O-glucosyltransferase rumi-like protein (DUF821)."]
["AT1G08520","ALB1",254.43,-0.95758,0.14987,-6.3895,1.66E-10,{"v":3.18e-09,"d":"3.18E-09"},"full_name=ALBINA 1. ALBINA 1. Encodes the CHLD subunit of the Mg-chelatase enzyme involved in chlorophyll biosynthesis. Lines carrying recessive mutations of this locus are white and seedling lethal.","AT3G01670","SEOa",47.664,-2.3105,0.34163,-6.763,1.35E-11,{"v":2.5e-10,"d":"2.50E-10"},"full_name=sieve element occlusion a. sieve element occlusion protein. Encodes a protein localized to phloem filaments that is required for phloem filament formation.","AT5G17850","CCX2",360.07,1.4074,0.18685,7.5319,{"v":5e-14,"d":"5.00E-14"},{"v":8.98e-13,"d":"8.98E-13"},"Sodium/calcium exchanger family protein.","AT2G36970",null,190.12,1.7471,0.19451,8.982,{"v":2.66e-19,"d":"2.66E-19"},{"v":4.62e-18,"d":"4.62E-18"},"UDP-Glycosyltransferase superfamily protein.","AT2G30970","ASP1",168.87,1.4068,0.20474,6.8711,{"v":6.37e-12,"d":"6.37E-12"},1.08E-10,"full_name=aspartate aminotransferase 1. aspartate aminotransferase 1. ASPARTATE AMINOTRANSFERASE 1"]
["AT4G23500",null,195.4,-1.1277,0.17683,-6.3774,{"v":1.8E-10,"d":"1.80E-10"},{"v":3.44e-09,"d":"3.44E-09"},"Pectin lyase-like superfamily protein.","AT5G28050","GSDA",740.27,-0.70282,0.10394,-6.7621,1.36E-11,{"v":2.52e-10,"d":"2.52E-10"},"Cytidine/deoxycytidylate deaminase family protein.","AT5G60360","ALP",1280.2,-0.91608,0.12167,-7.5293,{"v":5.1e-14,"d":"5.10E-14"},{"v":9.15e-13,"d":"9.15E-13"},"full_name=aleurain-like protease. aleurain-like protease. Encodes a senescence-associated thiol protease.","AT5G56500","Cpn60beta3",270.56,1.569,0.1747,8.9811,{"v":2.68e-19,"d":"2.68E-19"},{"v":4.65e-18,"d":"4.65E-18"},"full_name=chaperonin-60beta3. TCP-1/cpn60 chaperonin family protein. Encodes a subunit of chloroplasts chaperonins that are involved in mediating the folding of newly synthesized, translocated, or stress-denatured proteins. Cpn60 subunits are: Cpn60alpha1 (At2g28000), AtCpn60alpha2 (At5g18820), AtCpn60beta1 (At1g55490), AtCpn60beta2 (At3g13470), AtCpn60beta3 (At5g56500), AtCpn60beta4 (At1g26230).","AT3G17930","DAC",369.05,-0.87927,0.12804,-6.8673,6.54E-12,1.11E-10,"full_name=Defective Accumulation of Cytochrome b6/f complex. transmembrane protein. Encodes a thylakoid membrane protein involved in the accumulation of the cytochrome b6/f complex."]
["AT1G50900","GDC1",170.34,-1.084,0.17012,-6.3722,1.86E-10,{"v":3.56e-09,"d":"3.56E-09"},"full_name=Grana Deficient Chloroplast 1. Ankyrin repeat family protein. Encodes GDC1 (Grana Deficient Chloroplast 1), an ankyrin domain containing protein required fro chloroplast thylakoid grana formation.","AT5G02940",null,35.043,-3.3119,0.48981,-6.7615,1.37E-11,{"v":2.52e-10,"d":"2.52E-10"},"ion channel POLLUX-like protein, putative (DUF1012).","AT5G22810",null,463.74,-2.0277,0.26934,-7.5285,5.13E-14,{"v":9.2e-13,"d":"9.20E-13"},"GDSL-like lipase/acylhydrolase superfamily protein.","AT1G07630","PLL5",99.215,-2.1663,0.24148,-8.9709,{"v":2.94e-19,"d":"2.94E-19"},{"v":5.09e-18,"d":"5.09E-18"},"full_name=pol-like 5. pol-like 5. Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves.","AT2G19930",null,2088.2,-0.52422,0.076344,-6.8666,{"v":6.58e-12,"d":"6.58E-12"},1.11E-10,"RNA-dependent RNA polymerase family protein."]
["AT5G04220","SYTC",207.91,-1.1307,0.17765,-6.3649,1.95E-10,{"v":3.73e-09,"d":"3.73E-09"},"Calcium-dependent lipid-binding (CaLB domain) family protein.","AT2G22080",null,952.09,0.69325,0.10261,6.7561,1.42E-11,{"v":2.62e-10,"d":"2.62E-10"},"transmembrane protein.","AT2G46370","JAR1",445.56,-1.4428,0.19173,-7.5249,{"v":5.27e-14,"d":"5.27E-14"},{"v":9.44e-13,"d":"9.44E-13"},"full_name=JASMONATE RESISTANT 1. Auxin-responsive GH3 family protein. Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.","AT2G25940","ALPHA-VPE",57.748,-3.2007,0.35678,-8.9709,{"v":2.94e-19,"d":"2.94E-19"},{"v":5.09e-18,"d":"5.09E-18"},"full_name=alpha-vacuolar processing enzyme. alpha-vacuolar processing enzyme. Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions.","AT2G31751",null,38.807,-2.8242,0.41146,-6.8638,{"v":6.71e-12,"d":"6.71E-12"},1.13E-10,"Natural antisense transcript overlaps with AT2G31750. Potential natural antisense gene, locus overlaps with AT2G31750 Natural antisense transcript overlaps with AT2G31750"]
["AT4G19810","ChiC",44.58,2.6728,0.42005,6.3632,{"v":1.98e-10,"d":"1.98E-10"},{"v":3.76e-09,"d":"3.76E-09"},"full_name=class V chitinase. Glycosyl hydrolase family protein with chitinase insertion domain-containing protein. ChiC encodes a Class V chitinase that is a part of glycoside hydrolase family 18 based on CAZy groupings. It appears to primarily act as an exochitinase in vitro where it predominantly cleaves a chitobiose (GlcNAc)2 residue from the non-reducing end of a chitin oligosaccharide. However, it shows some minor endochitinase activity in vitro, as well. A putative 24 amino-acid signal peptide may direct this protein to the secretory system and it has been detected in cell wall apoplastic fluid. RT-PCR experiments demonstrate that ChiC transcript levels are increased in response to abscisisc acid, jasmonic acid, and NaCl stress. Microarray results also suggest that transcript levels rise in response to osmotic stress, two fungal pathogens, a bacterial pathogen, and the elicitor flagellin.","AT2G26640","KCS11",254.43,-1.1518,0.17053,-6.7545,1.43E-11,{"v":2.64e-10,"d":"2.64E-10"},"full_name=3-ketoacyl-CoA synthase 11. 3-ketoacyl-CoA synthase 11. Encodes KCS11, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT5G65710","HSL2",163.42,-1.4961,0.19884,-7.5241,{"v":5.31e-14,"d":"5.31E-14"},{"v":9.49e-13,"d":"9.49E-13"},"full_name=HAESA-like 2. HAESA-like 2. Encodes a protein controlling the separation step of floral organ abscission.","AT2G25900","ATCTH",406.24,1.9896,0.22189,8.9667,{"v":3.05e-19,"d":"3.05E-19"},{"v":5.28e-18,"d":"5.28E-18"},"Zinc finger C-x8-C-x5-C-x3-H type family protein. Encodes a protein with two tandem-arrayed CCCH-type zinc fingers that binds RNA and is involved in RNA turnover.","AT5G65207",null,415.11,0.91694,0.13364,6.8615,{"v":6.82e-12,"d":"6.82E-12"},1.15E-10,"hypothetical protein."]
["AT5G04500","GINT1",265.33,0.94398,0.14845,6.359,2.03E-10,{"v":3.86e-09,"d":"3.86E-09"},"glycosyltransferase family protein 47. a member of the Glycosyltransferase Family 64 (according to CAZy Database)","AT1G72410",null,255.63,-0.97341,0.14417,-6.7519,1.46E-11,2.69E-10,"COP1-interacting protein-like protein.","AT5G19340",null,40.26,-3.1353,0.41677,-7.5229,5.36E-14,{"v":9.57e-13,"d":"9.57E-13"},"hypothetical protein.","AT3G51250",null,192.05,-1.4842,0.16555,-8.965,{"v":3.1e-19,"d":"3.10E-19"},5.36E-18,"Senescence/dehydration-associated protein-like protein.","AT1G14740","TTA1",1499.8,0.55676,0.08122,6.855,{"v":7.13e-12,"d":"7.13E-12"},{"v":1.2E-10,"d":"1.20E-10"},"full_name=TITANIA 1. class I heat shock protein, putative (DUF1423). Encodes a PHD-finger protein that, with TTA1, is redundantly required for MP-dependent embryonic root meristem initiation."]
["AT2G43535",null,454.73,0.77717,0.12225,6.357,{"v":2.06e-10,"d":"2.06E-10"},{"v":3.91e-09,"d":"3.91E-09"},"Scorpion toxin-like knottin superfamily protein. Encodes a defensin-like (DEFL) family protein.","AT4G09030","AGP10",1498.1,0.66082,0.097876,6.7516,1.46E-11,2.69E-10,"full_name=arabinogalactan protein 10. arabinogalactan protein 10. Encodes arabinogalactan protein (AGP10).","AT4G36280","CRH1",39.019,-4.3029,0.57284,-7.5115,{"v":5.84e-14,"d":"5.84E-14"},1.04E-12,"full_name=CRT1 Homologue 1. Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein.","AT1G08200","AXS2",773.1,-0.81326,0.090719,-8.9647,{"v":3.11e-19,"d":"3.11E-19"},{"v":5.37e-18,"d":"5.37E-18"},"full_name=UDP-D-apiose/UDP-D-xylose synthase 2. UDP-D-apiose/UDP-D-xylose synthase 2. Encodes a putative UDP-D-apiose/UPD-D-xylose synthetase.","AT5G54760",null,418.62,-0.80964,0.11812,-6.8543,{"v":7.16e-12,"d":"7.16E-12"},{"v":1.2E-10,"d":"1.20E-10"},"Translation initiation factor SUI1 family protein."]
["AT2G29460","GSTU4",164.15,1.1173,0.1758,6.3557,{"v":2.08e-10,"d":"2.08E-10"},{"v":3.94E-9,"d":"3.94E-09"},"full_name=glutathione S-transferase tau 4. glutathione S-transferase tau 4. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","AT2G02120","PDF2.1",26493,0.60063,0.088987,6.7497,1.48E-11,{"v":2.72e-10,"d":"2.72E-10"},"Scorpion toxin-like knottin superfamily protein. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","AT1G18840","IQD30",874.43,-0.85378,0.11369,-7.5097,{"v":5.93e-14,"d":"5.93E-14"},{"v":1.06e-12,"d":"1.06E-12"},"full_name=IQ-domain 30. IQ-domain 30.","AT5G39610","NAC6",100.84,-2.6573,0.29651,-8.962,3.19E-19,{"v":5.49e-18,"d":"5.49E-18"},"full_name=NAC domain containing protein 6. NAC domain containing protein 6. Encodes a NAC-domain transcription factor. Positively regulates aging-induced cell death and senescence in leaves. This gene is upregulated in response to salt stress in wildtype as well as NTHK1 transgenic lines although in the latter case the induction was drastically reduced. It was also upregulated by ABA, ACC and NAA treatment, although in the latter two cases, the induction occurred relatively late when compared with NaCl or ABA treatments. Note: this protein (AtNAC6) on occasion has also been referred to as AtNAC2, not to be confused with the AtNAC2 found at locus AT3G15510.","AT5G19140","AILP1",1364.5,-1.126,0.16435,-6.8512,{"v":7.32e-12,"d":"7.32E-12"},{"v":1.23e-10,"d":"1.23E-10"},"aluminum induced protein with YGL and LRDR motifs."]
["AT5G10650","2024-07-01",436.41,0.7933,0.12503,6.3446,{"v":2.23e-10,"d":"2.23E-10"},{"v":4.23e-09,"d":"4.23E-09"},"RING/U-box superfamily protein.","AT1G34210","SERK2",113.92,-1.4105,0.20902,-6.7479,{"v":1.5E-11,"d":"1.50E-11"},{"v":2.75e-10,"d":"2.75E-10"},"full_name=somatic embryogenesis receptor-like kinase 2. somatic embryogenesis receptor-like kinase 2. Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production.","AT3G26650","GAPA",68.716,-2.1481,0.28612,-7.5075,{"v":6.02e-14,"d":"6.02E-14"},{"v":1.07e-12,"d":"1.07E-12"},"full_name=glyceraldehyde 3-phosphate dehydrogenase A subunit. glyceraldehyde 3-phosphate dehydrogenase A subunit. Encodes one of the two subunits forming the photosynthetic glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and as such a constituent of the supramolecular complex with phosphoribulokinase (PRK) thought to be linked by a small peptide encoded by CP12-2. GapA-1 is coordinately expressed by light with PRK and CP12-2. The enzyme activity, tested in leaf protein extracts dropped significantly after external sucrose treatment for the photosynthetic GAPDH (NADPH-dependent) but not for the cytosolic GAPDH (NADH-dependent).","AT2G28490",null,57759,-0.51213,0.057164,-8.9591,{"v":3.27e-19,"d":"3.27E-19"},5.64E-18,"RmlC-like cupins superfamily protein.","AT3G42050","VHA-H",968.27,0.6102,0.089104,6.8482,{"v":7.48e-12,"d":"7.48E-12"},{"v":1.25e-10,"d":"1.25E-10"},"vacuolar ATP synthase subunit H family protein."]
["AT5G49280",null,523.16,0.77951,0.12319,6.3279,{"v":2.48e-10,"d":"2.48E-10"},{"v":4.71e-09,"d":"4.71E-09"},"hydroxyproline-rich glycoprotein family protein.","AT2G22780","PMDH1",762.91,0.73957,0.10965,6.745,{"v":1.53e-11,"d":"1.53E-11"},{"v":2.81e-10,"d":"2.81E-10"},"full_name=peroxisomal NAD-malate dehydrogenase 1. peroxisomal NAD-malate dehydrogenase 1. encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.","AT1G33110",null,60.28,2.5252,0.3365,7.5044,{"v":6.17e-14,"d":"6.17E-14"},{"v":1.1E-12,"d":"1.10E-12"},"MATE efflux family protein.","AT5G40480","EMB3012",316.53,1.1516,0.12857,8.9569,{"v":3.34e-19,"d":"3.34E-19"},{"v":5.74e-18,"d":"5.74E-18"},"full_name=embryo defective 3012. embryo defective 3012.","AT5G58130","ROS3",593.4,0.66845,0.097653,6.8452,{"v":7.64e-12,"d":"7.64E-12"},1.28E-10,"full_name=REPRESSOR OF SILENCING 3. RNA-binding (RRM/RBD/RNP motifs) family protein. Encodes ROS3 (repressor of silencing 3), a RNA-binding protein required for DNA demethylation."]
["AT1G11130","SUB",36.07,-2.5818,0.40835,-6.3226,{"v":2.57e-10,"d":"2.57E-10"},{"v":4.87e-09,"d":"4.87E-09"},"full_name=STRUBBELIG. Leucine-rich repeat protein kinase family protein. Encodes a receptor-like kinase protein with a predicted extracellular domain of six leucine-rich repeats and an intracellular serine-threonine kinase domain expressed throughout the developing root. Regulates expression of GLABRA2, CAPRICE, WEREWOLF, and ENHANCER OF GLABRA3. Required for floral organ shape, the development of the outer integument of ovules, and stem development. Regulates cell shape and cell division planes in the L2 layer of floral meristems and the L1-derived outer integument of ovules. Controls specification of epidermal root hairs. Participates in the coordination of cell morphogenesis between cell layers during floral development.","AT5G55470","NHX3",316.79,0.95802,0.14211,6.7415,{"v":1.57e-11,"d":"1.57E-11"},{"v":2.87e-10,"d":"2.87E-10"},"full_name=Na+/H+ (sodium hydrogen) exchanger 3. Na+/H+ (sodium hydrogen) exchanger 3. member of Sodium proton exchanger family","AT3G11630","2CPA",257.73,-1.2081,0.16104,-7.5014,{"v":6.31e-14,"d":"6.31E-14"},{"v":1.12e-12,"d":"1.12E-12"},"Thioredoxin superfamily protein. Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues.","AT1G69830","AMY3",253.12,-1.2455,0.13914,-8.9511,{"v":3.52e-19,"d":"3.52E-19"},{"v":6.05e-18,"d":"6.05E-18"},"full_name=alpha-amylase-like 3. alpha-amylase-like 3. Encodes a plastid-localized &#945;-amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation. Expression follows circadian rhythms.","AT5G13950",null,902.41,0.63067,0.092234,6.8377,{"v":8.05e-12,"d":"8.05E-12"},1.35E-10,"nuclear factor kappa-B-binding protein."]
["AT1G78995",null,45.933,-2.0811,0.32922,-6.3212,{"v":2.6e-10,"d":"2.60E-10"},{"v":4.9E-9,"d":"4.90E-09"},"hypothetical protein.","AT1G42540","GLR3.3",97.319,1.4882,0.2212,6.7277,{"v":1.72e-11,"d":"1.72E-11"},3.15E-10,"full_name=glutamate receptor 3.3. glutamate receptor 3.3. member of Putative ligand-gated ion channel subunit family","AT1G26150","PERK10",164.63,-1.6036,0.21382,-7.4998,{"v":6.39e-14,"d":"6.39E-14"},1.13E-12,"full_name=proline-rich extensin-like receptor kinase 10. proline-rich extensin-like receptor kinase 10. Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807).","AT2G03120","SPP",315.22,-1.243,0.13892,-8.9475,{"v":3.63e-19,"d":"3.63E-19"},{"v":6.24e-18,"d":"6.24E-18"},"full_name=signal peptide peptidase. signal peptide peptidase. homologous to Signal Peptide Peptidases (SPP), required for pollen development and pollen germination. No homozygotes could be recovered from a T-DNA insertion mutant.","AT5G55370","AT2",63.479,2.0045,0.29325,6.8356,{"v":8.17e-12,"d":"8.17E-12"},{"v":1.37e-10,"d":"1.37E-10"},"MBOAT (membrane bound O-acyl transferase) family protein."]
["AT3G23780","NRPD2A",306.18,-0.93166,0.14749,-6.3168,{"v":2.67e-10,"d":"2.67E-10"},{"v":5.04E-9,"d":"5.04E-09"},"full_name=nuclear RNA polymerase D2A. nuclear RNA polymerase D2A. This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin.","AT5G42900","COR27",557.92,-0.84751,0.126,-6.7264,{"v":1.74e-11,"d":"1.74E-11"},{"v":3.18e-10,"d":"3.18E-10"},"full_name=cold regulated gene 27. cold regulated protein 27.","AT3G19450","ATCAD4",80.516,-1.967,0.26231,-7.4986,{"v":6.45e-14,"d":"6.45E-14"},1.14E-12,"GroES-like zinc-binding alcohol dehydrogenase family protein. Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates.","AT5G51490",null,93.913,-7.7206,0.86339,-8.9422,{"v":3.81e-19,"d":"3.81E-19"},{"v":6.54e-18,"d":"6.54E-18"},"Plant invertase/pectin methylesterase inhibitor superfamily.","AT4G33210","SLOMO",971.73,0.56775,0.083077,6.834,{"v":8.26e-12,"d":"8.26E-12"},{"v":1.38e-10,"d":"1.38E-10"},"full_name=SLOW MOTION. F-box family protein. Encodes SLOMO (SLOW MOTION), a F-box protein required for auxin homeostasis and normal timing of lateral organ initiation at the shoot meristem."]
["AT3G07010",null,189.5,-1.2696,0.20107,-6.3142,{"v":2.72e-10,"d":"2.72E-10"},{"v":5.12e-09,"d":"5.12E-09"},"Pectin lyase-like superfamily protein.","AT1G09580",null,158.23,-1.2585,0.1871,-6.7263,{"v":1.74e-11,"d":"1.74E-11"},{"v":3.18e-10,"d":"3.18E-10"},"emp24/gp25L/p24 family/GOLD family protein.","AT3G05220","ATHMP23",1116.4,0.92747,0.12372,7.4963,6.57E-14,{"v":1.16e-12,"d":"1.16E-12"},"Heavy metal transport/detoxification superfamily protein.","AT1G62200","PTR6",56.036,-3.5898,0.40177,-8.935,{"v":4.07e-19,"d":"4.07E-19"},{"v":6.97e-18,"d":"6.97E-18"},"full_name=peptide transporter 6. Major facilitator superfamily protein.","AT2G33580","LYK5",333.88,-0.86902,0.12722,-6.831,{"v":8.43e-12,"d":"8.43E-12"},1.41E-10,"full_name=LysM-containing receptor-like kinase 5. Protein kinase superfamily protein. Encodes a LysM-containing receptor-like kinase. LYK5 is a major chitin receptor and forms a chitin-induced complex with related kinase CERK1."]
["AT1G55360",null,4120,-0.83002,0.1315,-6.3121,{"v":2.75e-10,"d":"2.75E-10"},{"v":5.19e-09,"d":"5.19E-09"},"tRNA-splicing ligase (DUF239).","AT5G42650","AOS",168.85,1.2594,0.18736,6.7219,{"v":1.79e-11,"d":"1.79E-11"},{"v":3.27e-10,"d":"3.27E-10"},"full_name=allene oxide synthase. allene oxide synthase. Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.","AT5G18500",null,331.73,-1.009,0.13463,-7.4944,{"v":6.66e-14,"d":"6.66E-14"},1.18E-12,"Protein kinase superfamily protein.","AT4G17530","RAB1C",1317.4,-0.85139,0.095315,-8.9324,{"v":4.17e-19,"d":"4.17E-19"},{"v":7.13e-18,"d":"7.13E-18"},"full_name=RAB GTPase homolog 1C. RAB GTPase homolog 1C. AtRabD2c encodes a Rab GTPase, which plays important roles in pollen development, germination and tube elongation.","AT4G11110","SPA2",1072.2,0.5531,0.080986,6.8296,8.52E-12,1.42E-10,"full_name=SPA1-related 2. SPA1-related 2. Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants."]
["AT5G61570",null,29.066,-2.8944,0.45889,-6.3074,2.84E-10,{"v":5.34e-09,"d":"5.34E-09"},"Protein kinase superfamily protein.","AT4G14780",null,740.06,-0.81875,0.12206,-6.7077,{"v":1.98e-11,"d":"1.98E-11"},{"v":3.6E-10,"d":"3.60E-10"},"Protein kinase superfamily protein.","AT1G17130","CWC16B",526.19,1.03,0.13747,7.4922,{"v":6.77e-14,"d":"6.77E-14"},{"v":1.2e-12,"d":"1.20E-12"},"coiled-coil protein (DUF572).","AT5G62580",null,182.95,-1.5868,0.17774,-8.9273,{"v":4.36e-19,"d":"4.36E-19"},{"v":7.45e-18,"d":"7.45E-18"},"ARM repeat superfamily protein.","AT3G47640","PYE",282.49,-1.0697,0.15668,-6.8273,{"v":8.65e-12,"d":"8.65E-12"},{"v":1.44e-10,"d":"1.44E-10"},"full_name=POPEYE. basic helix-loop-helix (bHLH) DNA-binding superfamily protein. Encodes POPEYE (PYE), a bHLH transcription factor regulating response to iron deficiency in Arabidopsis roots."]
["AT3G17650","YSL5",92.777,-1.4246,0.22614,-6.2997,2.98E-10,{"v":5.61e-09,"d":"5.61E-09"},"full_name=YELLOW STRIPE like 5. YELLOW STRIPE like 5. Arabidopsis thaliana metal-nicotianamine transporter YSL5","AT2G44830","PAX",95.99,-1.5572,0.23217,-6.7073,{"v":1.98e-11,"d":"1.98E-11"},{"v":3.61e-10,"d":"3.61E-10"},"Protein kinase superfamily protein.","AT5G14580",null,123.42,1.8056,0.24108,7.4897,{"v":6.9e-14,"d":"6.90E-14"},{"v":1.22e-12,"d":"1.22E-12"},"polyribonucleotide nucleotidyltransferase.","AT4G38060","CCI2",106.63,-2.4626,0.27616,-8.9172,{"v":4.78e-19,"d":"4.78E-19"},{"v":8.16e-18,"d":"8.16E-18"},"hypothetical protein.","AT3G12490","CYSB",8596.3,-0.48384,0.070874,-6.8268,{"v":8.68e-12,"d":"8.68E-12"},{"v":1.44e-10,"d":"1.44E-10"},"full_name=cystatin B. cystatin B. Encodes a protein with cysteine proteinase inhibitor activity. Overexpression increases tolerance to abiotic stressors (i.e.salt,osmotic, cold stress)."]
["AT1G21770",null,314.89,-0.94363,0.1498,-6.2994,2.99E-10,{"v":5.61e-09,"d":"5.61E-09"},"Acyl-CoA N-acyltransferases (NAT) superfamily protein.","AT5G58160","FH13",957.82,0.66065,0.098505,6.7068,1.99E-11,{"v":3.62e-10,"d":"3.62E-10"},"actin binding protein.","AT1G20480",null,41.795,-3.0015,0.40076,-7.4896,{"v":6.91e-14,"d":"6.91E-14"},{"v":1.22e-12,"d":"1.22E-12"},"AMP-dependent synthetase and ligase family protein.","AT4G00430","PIP1;4",302.29,-1.5204,0.17056,-8.9138,4.93E-19,{"v":8.41e-18,"d":"8.41E-18"},"full_name=plasma membrane intrinsic protein 1;4. plasma membrane intrinsic protein 1;4. a member of the plasma membrane intrinsic protein subfamily PIP1.","AT3G11800",null,271.47,-0.9376,0.13751,-6.8183,{"v":9.21e-12,"d":"9.21E-12"},{"v":1.53e-10,"d":"1.53E-10"},"Expp1 protein."]
["AT1G18250","ATLP-1",24.326,-5.1025,0.81029,-6.2971,{"v":3.03e-10,"d":"3.03E-10"},{"v":5.69E-9,"d":"5.69E-09"},"Pathogenesis-related thaumatin superfamily protein. encodes a thaumatin-like protein","AT5G04000",null,234.98,1.1849,0.17668,6.7065,1.99E-11,{"v":3.62e-10,"d":"3.62E-10"},"hypothetical protein.","AT2G41400",null,1100.3,-1.6694,0.22301,-7.4855,{"v":7.13e-14,"d":"7.13E-14"},{"v":1.26e-12,"d":"1.26E-12"},"Pollen Ole e 1 allergen and extensin family protein.","AT1G49960",null,99.11,-7.8,0.87588,-8.9054,{"v":5.32e-19,"d":"5.32E-19"},{"v":9.06e-18,"d":"9.06E-18"},"Xanthine/uracil permease family protein.","AT4G27950","CRF4",40.996,3.1382,0.46036,6.8168,{"v":9.31e-12,"d":"9.31E-12"},{"v":1.54e-10,"d":"1.54E-10"},"full_name=cytokinin response factor 4. cytokinin response factor 4. encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily."]
["AT4G29150","IQD25",60.701,-1.8213,0.28925,-6.2966,{"v":3.04e-10,"d":"3.04E-10"},{"v":5.7e-09,"d":"5.70E-09"},"full_name=IQ-domain 25. IQ-domain 25.","AT4G38740","ROC1",8139.1,0.63715,0.095013,6.7059,{"v":2e-11,"d":"2.00E-11"},{"v":3.63e-10,"d":"3.63E-10"},"full_name=rotamase CYP 1. rotamase CYP 1. Encodes cytosolic cyclophilin ROC1.","AT1G25530",null,1396.9,-0.97121,0.12977,-7.484,{"v":7.21e-14,"d":"7.21E-14"},1.27E-12,"Transmembrane amino acid transporter family protein.","AT2G41170",null,92.375,-3.0222,0.3398,-8.8939,{"v":5.9e-19,"d":"5.90E-19"},{"v":1e-17,"d":"1.00E-17"},"F-box family protein.","AT3G12960","SMP1",5856,-2.0188,0.29636,-6.812,9.63E-12,{"v":1.6e-10,"d":"1.60E-10"},"full_name=seed maturation protein 1. seed maturation protein."]
["AT5G13670","UMAMIT15",138.4,-1.1706,0.18594,-6.2956,{"v":3.06e-10,"d":"3.06E-10"},{"v":5.73e-09,"d":"5.73E-09"},"full_name=Usually multiple acids move in and out Transporters 15. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT4G22235",null,27.381,-3.9021,0.58229,-6.7013,2.07E-11,3.75E-10,"defensin-like protein. Encodes a defensin-like (DEFL) family protein.","AT4G25130","PMSR4",1713.4,0.90636,0.12113,7.4823,{"v":7.31e-14,"d":"7.31E-14"},1.28E-12,"full_name=peptide met sulfoxide reductase 4. peptide met sulfoxide reductase 4. Encodes a chloroplast-localized methionine sulfoxide reductase that is a member of the MSRA family. Involved in protection of chloroplasts from oxidative stress.","AT3G25870",null,475.76,-1.1023,0.124,-8.8896,{"v":6.13e-19,"d":"6.13E-19"},1.04E-17,"hypothetical protein.","AT5G49645",null,592.84,1.4086,0.20696,6.8061,{"v":1e-11,"d":"1.00E-11"},1.66E-10,"hypothetical protein."]
["AT5G09930","ABCF2",19.954,7.829,1.2441,6.2927,{"v":3.12e-10,"d":"3.12E-10"},{"v":5.83e-09,"d":"5.83E-09"},"full_name=ATP-binding cassette F2. ABC transporter family protein. member of GCN subfamily","AT3G54080",null,245.38,-1.0482,0.15654,-6.6957,2.15E-11,3.89E-10,"Concanavalin A-like lectin family protein.","AT3G51430","YLS2",268.37,-1.3041,0.17435,-7.4796,{"v":7.46e-14,"d":"7.46E-14"},{"v":1.31e-12,"d":"1.31E-12"},"full_name=YELLOW-LEAF-SPECIFIC GENE 2. Calcium-dependent phosphotriesterase superfamily protein. Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.","AT5G02420","SMR3",45.732,-4.3918,0.49455,-8.8804,{"v":6.66e-19,"d":"6.66E-19"},1.13E-17,"cyclin-dependent kinase inhibitor SMR3-like protein.","AT3G19170","PREP1",1701.2,-0.52889,0.077746,-6.8028,{"v":1.03e-11,"d":"1.03E-11"},{"v":1.7e-10,"d":"1.70E-10"},"full_name=presequence protease 1. presequence protease 1. Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed only in siliques and flowers"]
["AT5G46700","TRN2",64.649,-1.8789,0.2986,-6.2921,3.13E-10,{"v":5.85e-09,"d":"5.85E-09"},"full_name=TORNADO 2. Tetraspanin family protein. Encodes a transmembrane protein of the tetraspanin (TET) family, one of 17 members found in Arabidopsis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway. Required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis.","AT2G26910","ABCG32",251.63,-0.98138,0.14674,-6.6878,2.27E-11,{"v":4.1e-10,"d":"4.10E-10"},"full_name=ATP-binding cassette G32. pleiotropic drug resistance 4. Encodes a member of the PLEIOTROPIC DRUG RESISTANCE family of ATP binding cassette transporters. Required for the formation of a functional cuticle.","AT2G22170","PLAT2",77.116,-2.4457,0.327,-7.4792,{"v":7.48e-14,"d":"7.48E-14"},{"v":1.31e-12,"d":"1.31E-12"},"full_name=PLAT domain protein 2. Lipase/lipooxygenase, PLAT/LH2 family protein.","AT5G28050","GSDA",146.75,-1.8644,0.21011,-8.8736,{"v":7.08e-19,"d":"7.08E-19"},{"v":1.2e-17,"d":"1.20E-17"},"Cytidine/deoxycytidylate deaminase family protein.","AT3G62190",null,426.9,-0.80246,0.11808,-6.7961,{"v":1.08e-11,"d":"1.08E-11"},{"v":1.78e-10,"d":"1.78E-10"},"Chaperone DnaJ-domain superfamily protein."]
["AT1G80245",null,136.52,1.6422,0.26124,6.2863,{"v":3.25e-10,"d":"3.25E-10"},{"v":6.07e-09,"d":"6.07E-09"},"Spc97 / Spc98 family of spindle pole body (SBP) component.","AT4G38080",null,407.38,-0.94523,0.14146,-6.6821,{"v":2.36e-11,"d":"2.36E-11"},{"v":4.26e-10,"d":"4.26E-10"},"hydroxyproline-rich glycoprotein family protein.","AT1G32380","PRS2",1211.3,0.95042,0.12709,7.4785,{"v":7.52e-14,"d":"7.52E-14"},1.32E-12,"full_name=phosphoribosyl pyrophosphate (PRPP) synthase 2. phosphoribosyl pyrophosphate (PRPP) synthase 2. Encodes a P-dependent phosphoribosyl pyrophosphate (PRPP) synthase.","AT2G41380",null,44.752,-4.7303,0.53319,-8.8717,{"v":7.21e-19,"d":"7.21E-19"},1.22E-17,"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT3G56190","ALPHA-SNAP2",965.93,0.55874,0.082222,6.7955,{"v":1.08e-11,"d":"1.08E-11"},{"v":1.78e-10,"d":"1.78E-10"},"full_name=alpha-soluble NSF attachment protein 2. alpha-soluble NSF attachment protein 2. Encodes one of two alpha-SNAPs (soluble NSF attachment protein) in Arabidopsis"]
["AT1G17200","CASPL2A1",263.14,-0.91205,0.14514,-6.2839,{"v":3.3E-10,"d":"3.30E-10"},{"v":6.15e-09,"d":"6.15E-09"},"Uncharacterized protein family (UPF0497).","AT5G67480","BT4",1692.4,0.80761,0.12092,6.6788,{"v":2.41e-11,"d":"2.41E-11"},4.35E-10,"full_name=BTB and TAZ domain protein 4. BTB and TAZ domain protein 4. BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.","AT3G23430","PHO1",405.04,-1.0981,0.14687,-7.4767,{"v":7.62e-14,"d":"7.62E-14"},1.33E-12,"full_name=phosphate 1. phosphate 1. Encodes a protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains. The mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. Its expression is repressed by phosphate (Pi) in shoots, and transiently induced by phosphite (Phi) in roots and shoots.","AT1G01520","ASG4",106.22,2.2365,0.25232,8.8638,{"v":7.74e-19,"d":"7.74E-19"},1.31E-17,"full_name=ALTERED SEED GERMINATION 4. Homeodomain-like superfamily protein.","AT2G25625","CV",829.84,-0.86872,0.12793,-6.7904,{"v":1.12e-11,"d":"1.12E-11"},{"v":1.84e-10,"d":"1.84E-10"},"histone deacetylase-like protein."]
["AT4G26400","BTL05",181.92,-1.0408,0.16567,-6.2823,{"v":3.34e-10,"d":"3.34E-10"},{"v":6.21e-09,"d":"6.21E-09"},"RING/U-box superfamily protein.","AT1G60800","NIK3",123.01,-1.4155,0.21205,-6.6756,{"v":2.46e-11,"d":"2.46E-11"},{"v":4.44e-10,"d":"4.44E-10"},"full_name=NSP-interacting kinase 3. NSP-interacting kinase 3.","AT3G49250","DMS3",43.629,-3.1985,0.4279,-7.4749,{"v":7.73e-14,"d":"7.73E-14"},{"v":1.35e-12,"d":"1.35E-12"},"full_name=DEFECTIVE IN MERISTEM SILENCING 3. defective in meristem silencing 3. Similar to hinge-domain region of structural maintenance of chromosomes (SMC)proteins.Putative chromosome architecture protein that can potentialy link nucleic acids in facilitating an RNA1-mediated epigenetic modification involving secondary siRNA and spreading of DNA methylation.","AT1G02220","NAC003",53.48,-5.288,0.5966,-8.8635,{"v":7.75e-19,"d":"7.75E-19"},1.31E-17,"full_name=NAC domain containing protein 3. NAC domain containing protein 3.","AT2G41840",null,1713.8,0.56555,0.083291,6.7901,{"v":1.12e-11,"d":"1.12E-11"},{"v":1.85e-10,"d":"1.85E-10"},"Ribosomal protein S5 family protein."]
["AT3G21720","ICL",4618.3,0.86552,0.13781,6.2804,{"v":3.38e-10,"d":"3.38E-10"},{"v":6.28e-09,"d":"6.28E-09"},"full_name=isocitrate lyase. isocitrate lyase. Encodes a glyoxylate cycle enzyme isocitrate lyase (ICL).","AT4G09010","TL29",25.988,-4.6076,0.69073,-6.6706,{"v":2.55e-11,"d":"2.55E-11"},{"v":4.59e-10,"d":"4.59E-10"},"full_name=thylakoid lumen 29. ascorbate peroxidase 4. Encodes a thylakoid lumen protein that was initially believed to act as a microsomal ascorbate peroxidase APX4 but to date, no evidence of enzymatic activity has been found.","AT5G47820","FRA1",464.9,-1.0208,0.13666,-7.4696,{"v":8.04e-14,"d":"8.04E-14"},{"v":1.41e-12,"d":"1.41E-12"},"full_name=FRAGILE FIBER 1. P-loop containing nucleoside triphosphate hydrolases superfamily protein. encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers.","AT4G30920","LAP2",206.34,1.4856,0.16782,8.8524,{"v":8.57e-19,"d":"8.57E-19"},{"v":1.45e-17,"d":"1.45E-17"},"full_name=leucyl aminopeptidase 2. Cytosol aminopeptidase family protein. Encodes LAP2, an aminopeptidase playing key roles in senescence, stress response and amino acid turnover.","AT5G41070","DRB5",178.34,1.2071,0.17778,6.7899,{"v":1.12e-11,"d":"1.12E-11"},{"v":1.85e-10,"d":"1.85E-10"},"full_name=dsRNA-binding protein 5. dsRNA-binding protein 5. Encodes a double-stranded RNA binding protein."]
["AT4G17560",null,58.009,-1.7918,0.28535,-6.2791,{"v":3.41e-10,"d":"3.41E-10"},{"v":6.33e-09,"d":"6.33E-09"},"Ribosomal protein L19 family protein.","AT1G04680",null,43.696,-2.6242,0.39352,-6.6685,{"v":2.58e-11,"d":"2.58E-11"},4.65E-10,"Pectin lyase-like superfamily protein.","AT3G56850","AREB3",456.89,-0.98782,0.1323,-7.4664,{"v":8.24e-14,"d":"8.24E-14"},{"v":1.44e-12,"d":"1.44E-12"},"full_name=ABA-responsive element binding protein 3. ABA-responsive element binding protein 3. Encodes an ABA-responsive element binding protein with a bZIP domain. Located in the nucleus and expressed in the embryo during seed maturation.","AT3G21730","FOLB3",200.22,-9.394,1.0614,-8.8504,{"v":8.72e-19,"d":"8.72E-19"},1.47E-17,"Dihydroneopterin aldolase.","AT1G23050",null,244.27,-1.0108,0.14889,-6.7886,{"v":1.13e-11,"d":"1.13E-11"},1.86E-10,"hydroxyproline-rich glycoprotein family protein."]
["AT5G47720","AACT1",763.02,-0.69967,0.11155,-6.2723,{"v":3.56e-10,"d":"3.56E-10"},{"v":6.61e-09,"d":"6.61E-09"},"full_name=acetoacetyl-CoA thiolase 1. Thiolase family protein. Encodes a functional acetoacetyl-CoA thiolase that is functionally redundant with AACT2. Loss-of-function mutants show no apparent growth phenotypes.","AT1G54730",null,335.33,-0.9089,0.13636,-6.6656,{"v":2.64e-11,"d":"2.64E-11"},{"v":4.74e-10,"d":"4.74E-10"},"Major facilitator superfamily protein.","AT2G36307","ZPR4",319.48,-1.1445,0.15328,-7.4664,{"v":8.24e-14,"d":"8.24E-14"},{"v":1.44e-12,"d":"1.44E-12"},"other_RNA. Unknown gene","AT5G66170","STR18",122.71,-1.8427,0.20823,-8.8493,{"v":8.8e-19,"d":"8.80E-19"},{"v":1.48e-17,"d":"1.48E-17"},"full_name=sulfurtransferase 18. sulfurtransferase 18. Encodes a thiosulfate sulfurtransferase/rhodanese.","AT4G27120",null,579.85,-0.73026,0.1076,-6.7865,{"v":1.15e-11,"d":"1.15E-11"},{"v":1.89e-10,"d":"1.89E-10"},"DDRGK domain protein."]
["AT1G52760","LysoPL2",1623,-0.67822,0.10816,-6.2703,{"v":3.6E-10,"d":"3.60E-10"},{"v":6.68e-09,"d":"6.68E-09"},"full_name=lysophospholipase 2. lysophospholipase 2. Encodes caffeoyl shikimate esterase and is involved in lignin biosynthesis. CSE converts caffeoyl shikimate to caffiate. Loss of function mutations have reduced lignin content and collapsed vessel elements. It is also reported to function as a lysophospholipase 2 (LysoPL2) involved in tolerance to cadmium-induced oxidative stress. Binds Acyl-CoA-binding protein 2 (ACBP2).","AT5G22640","emb1211",152.07,-1.2032,0.18054,-6.6645,{"v":2.66e-11,"d":"2.66E-11"},{"v":4.77e-10,"d":"4.77E-10"},"full_name=embryo defective 1211. MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein. EMB1211 is a MORN (multiple membrane occupation and recognition nexus) motif containing protein involved in embryo development and chloroplast biogenesis.","AT5G55410",null,1467.1,1.3701,0.18355,7.4643,{"v":8.38e-14,"d":"8.38E-14"},1.46E-12,"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT1G53270","ABCG10",45.519,-5.2191,0.59078,-8.8343,1.01E-18,{"v":1.7e-17,"d":"1.70E-17"},"full_name=ATP-binding cassette G10. ABC-2 type transporter family protein.","AT1G25260","RDP",482.83,0.72628,0.10703,6.7854,{"v":1.16e-11,"d":"1.16E-11"},{"v":1.9e-10,"d":"1.90E-10"},"Ribosomal protein L10 family protein."]
["AT5G07680","NAC080",1108,0.99665,0.15896,6.27,{"v":3.61e-10,"d":"3.61E-10"},{"v":6.69e-09,"d":"6.69E-09"},"full_name=NAC domain containing protein 80. NAC domain containing protein 80.","AT1G47540",null,27360,-0.81566,0.1225,-6.6584,{"v":2.77e-11,"d":"2.77E-11"},{"v":4.97e-10,"d":"4.97E-10"},"Scorpion toxin-like knottin superfamily protein.","AT3G27200",null,840.92,-0.94542,0.12669,-7.4624,{"v":8.49e-14,"d":"8.49E-14"},1.48E-12,"Cupredoxin superfamily protein.","AT5G07510","GRP14",83.937,-2.1693,0.24566,-8.8306,{"v":1.04e-18,"d":"1.04E-18"},{"v":1.75e-17,"d":"1.75E-17"},"full_name=glycine-rich protein 14. glycine-rich protein 14. encodes a glycine-rich protein that is expressed in low abundance in stems and leaves, and very low abundance in flowers.","AT5G62200","ATS3B",620.74,-0.70455,0.10386,-6.7838,{"v":1.17e-11,"d":"1.17E-11"},{"v":1.92e-10,"d":"1.92E-10"},"Embryo-specific protein 3, (ATS3)."]
["AT3G19450","ATCAD4",644.98,-0.95061,0.15177,-6.2634,{"v":3.77e-10,"d":"3.77E-10"},{"v":6.97e-09,"d":"6.97E-09"},"GroES-like zinc-binding alcohol dehydrogenase family protein. Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates.","AT5G37000",null,42.714,-2.3382,0.35167,-6.6488,2.96E-11,{"v":5.3e-10,"d":"5.30E-10"},"glycosyltransferase family exostosin protein.","AT2G03350",null,48.511,-2.8673,0.3845,-7.4571,{"v":8.85e-14,"d":"8.85E-14"},{"v":1.54e-12,"d":"1.54E-12"},"DUF538 family protein (Protein of unknown function, DUF538).","AT4G18920",null,535.31,-1.0271,0.11632,-8.8298,1.05E-18,{"v":1.76e-17,"d":"1.76E-17"},"histone acetyltransferase (DUF1264).","AT1G12780","UGE1",404.97,0.79809,0.11774,6.7782,{"v":1.22e-11,"d":"1.22E-11"},{"v":1.99e-10,"d":"1.99E-10"},"full_name=UDP-D-glucose/UDP-D-galactose 4-epimerase 1. UDP-D-glucose/UDP-D-galactose 4-epimerase 1. Encodes a UDP-glucose epimerase that catalyzes the interconversion of the sugar nucleotides UDP-glucose UDP-galactose via a UDP-4-keto-hexose intermediate. Responsive to stress."]
["AT2G36145",null,509.2,-0.80497,0.12858,-6.2605,{"v":3.84e-10,"d":"3.84E-10"},{"v":7.1e-09,"d":"7.10E-09"},"hypothetical protein.","AT1G67730","KCR1",1663.9,-0.6312,0.094943,-6.6482,{"v":2.97e-11,"d":"2.97E-11"},{"v":5.31e-10,"d":"5.31E-10"},"full_name=beta-ketoacyl reductase 1. beta-ketoacyl reductase 1. Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene.","AT1G72410",null,96.1,-1.7045,0.2286,-7.4563,{"v":8.9e-14,"d":"8.90E-14"},{"v":1.54e-12,"d":"1.54E-12"},"COP1-interacting protein-like protein.","AT5G56350",null,67.798,-2.5906,0.2934,-8.8296,1.05E-18,{"v":1.76e-17,"d":"1.76E-17"},"Pyruvate kinase family protein.","AT3G48660",null,577.48,-0.77427,0.11427,-6.7758,1.24E-11,2.02E-10,"transmembrane protein, putative (DUF 3339)."]
["AT1G62620",null,401.59,0.87192,0.1394,6.255,{"v":3.98e-10,"d":"3.98E-10"},{"v":7.34e-09,"d":"7.34E-09"},"Flavin-binding monooxygenase family protein.","AT1G26150","PERK10",411.04,-0.86984,0.13084,-6.6481,{"v":2.97e-11,"d":"2.97E-11"},{"v":5.31e-10,"d":"5.31E-10"},"full_name=proline-rich extensin-like receptor kinase 10. proline-rich extensin-like receptor kinase 10. Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807).","AT1G56170","NF-YC2",196.41,-1.5804,0.21208,-7.4522,{"v":9.18e-14,"d":"9.18E-14"},{"v":1.59e-12,"d":"1.59E-12"},"full_name=nuclear factor Y, subunit C2. nuclear factor Y, subunit C2. Encodes a protein with similarity to a subunit of the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5B) and expressed in vegetative and reproductive tissues","AT4G26740","ATS1",27351,-0.94115,0.10669,-8.8212,1.13E-18,{"v":1.9e-17,"d":"1.90E-17"},"full_name=seed gene 1. peroxygenase 1. Encodes caleosin, a 27-kDa protein found within seed lipid bodies. Gene is expressed preferentially in the embryo, has similarity to a rice ABA-responsive gene, EFA27. Catalyze hydroperoxide-dependent mono-oxygenation reactions. Require calcium for peroxygenase activity. Probably deeply buried in lipid droplets or microsomes.","AT5G10070",null,808.85,-0.8054,0.11896,-6.7703,1.28E-11,{"v":2.1E-10,"d":"2.10E-10"},"RNase L inhibitor protein-like protein."]
["AT3G47790","ABCA8",26.387,5.7813,0.9251,6.2494,{"v":4.12e-10,"d":"4.12E-10"},{"v":7.6e-09,"d":"7.60E-09"},"full_name=ATP-binding cassette A8. ABC2 homolog 7. member of ATH subfamily","AT1G78500","PEN6",4358,-0.57448,0.086423,-6.6473,{"v":2.99e-11,"d":"2.99E-11"},{"v":5.34e-10,"d":"5.34E-10"},"Terpenoid cyclases family protein. Encodes a protein with pentacyclic triterpene synthase activity. In addition to the compounds lupeol, &#945;-amyrin and bauerenol, this enzyme was also shown to produce two <i>seco</i>-triterpenes: &#945;- and &#946;-<i>seco</i>-amyrin.","AT1G09420","G6PD4",341.97,-1.0247,0.13752,-7.4512,{"v":9.25e-14,"d":"9.25E-14"},{"v":1.6E-12,"d":"1.60E-12"},"full_name=glucose-6-phosphate dehydrogenase 4. glucose-6-phosphate dehydrogenase 4. Encodes a protein similar to glucose-6-phosphate dehydrogenase but, based on amino acid differences in the active site and lack of activity, does not encode a functional G6PDH. The amino acid sequence for the consensus sequence of the G6PDH active site (DHYLGKE) differs in three places in this protein. gc exon splice site at 20574 is based on protein alignment, and is not confirmed experimentally.","AT3G60150",null,119.15,1.9651,0.22285,8.8182,1.16E-18,{"v":1.95e-17,"d":"1.95E-17"},"NADH dehydrogenase ubiquinone 1 alpha subcomplex assembly factor-like protein (DUF498/DUF598).","AT4G22820","SAP9",376.89,-0.82466,0.12194,-6.7629,1.35E-11,{"v":2.21e-10,"d":"2.21E-10"},"A20/AN1-like zinc finger family protein."]
["AT5G08280","HEMC",254.85,-0.94767,0.15165,-6.2492,{"v":4.13e-10,"d":"4.13E-10"},{"v":7.6e-09,"d":"7.60E-09"},"full_name=hydroxymethylbilane synthase. hydroxymethylbilane synthase. Encodes a protein with porphobilinogen deaminase activity. This protein is targeted to the chloroplast. Mutants spontaneously develop chlorotic leaf lesions in the absence of pathogen attack, resembling the phenotype of lesion-mimic mutants.","AT5G17770","CBR",509.05,-0.76325,0.11487,-6.6444,{"v":3.05e-11,"d":"3.05E-11"},{"v":5.44e-10,"d":"5.44E-10"},"full_name=NADH:cytochrome B5 reductase 1. NADH:cytochrome B5 reductase 1. Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor.","AT5G58290","RPT3",1424,0.95497,0.12816,7.4511,{"v":9.26e-14,"d":"9.26E-14"},{"v":1.6E-12,"d":"1.60E-12"},"full_name=regulatory particle triple-A ATPase 3. regulatory particle triple-A ATPase 3. 26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA,","AT5G13700","PAO1",220.57,-1.6583,0.18815,-8.8137,{"v":1.21e-18,"d":"1.21E-18"},{"v":2.03e-17,"d":"2.03E-17"},"full_name=polyamine oxidase 1. polyamine oxidase 1. Encodes a protein with polyamine oxidase activity. The mRNA of this gene is only expressed in very low amounts in the organs where it was detected (light-grown plants).","AT1G28640",null,295,-1.0057,0.14888,-6.7555,1.42E-11,2.32E-10,"GDSL-like Lipase/Acylhydrolase superfamily protein."]
["AT4G27170","SESA4",211600,0.7452,0.11937,6.243,{"v":4.29e-10,"d":"4.29E-10"},{"v":7.91e-09,"d":"7.91E-09"},"full_name=seed storage albumin 4. seed storage albumin 4.","AT2G40820",null,241.54,-1.0815,0.16282,-6.6425,3.08E-11,{"v":5.5e-10,"d":"5.50E-10"},"stomatal closure actin-binding-like protein.","AT2G39930","ISA1",73.199,-2.1594,0.28998,-7.4469,{"v":9.56e-14,"d":"9.56E-14"},1.65E-12,"full_name=isoamylase 1. isoamylase 1. Encodes an isoamylase-type debranching enzyme. Mutations in this gene cause the loss of detectable isoamylase activity and the disruption of normal starch structure. Mutants have reduced starch content and abnormally structured amylopectins and phytoglycogens. It has been postulated that AtISA1 interacts with AtISA2 to form the Iso1 complex.","AT1G03900","ABCI18",197.36,1.452,0.16481,8.8104,{"v":1.25e-18,"d":"1.25E-18"},{"v":2.09e-17,"d":"2.09E-17"},"full_name=ATP-binding cassette I18. non-intrinsic ABC protein 4. member of NAP family, an heterogeneous subfamily of the ATP-binding Cassette (ABC) superfamily of membrane transporters. The NAPs proteins are characterized by having only one nucleotide-binding folds (NBFs) domain.","AT1G31930","XLG3",621.09,0.65862,0.097501,6.755,1.43E-11,{"v":2.33e-10,"d":"2.33E-10"},"full_name=extra-large GTP-binding protein 3. extra-large GTP-binding protein 3. Encodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses."]
["AT1G22590","AGL87",365.51,-0.86614,0.13888,-6.2366,{"v":4.47e-10,"d":"4.47E-10"},{"v":8.23e-09,"d":"8.23E-09"},"full_name=AGAMOUS-like 87. AGAMOUS-like 87.","AT1G47900",null,452.54,-0.87997,0.13252,-6.6402,{"v":3.13e-11,"d":"3.13E-11"},{"v":5.58e-10,"d":"5.58E-10"},"filament-like protein (DUF869).","AT2G07080",null,110.18,1.5446,0.20745,7.4456,{"v":9.65e-14,"d":"9.65E-14"},1.67E-12,"transposable_element_gene.","AT5G26000","TGG1",1934.9,-1.3321,0.15121,-8.8091,1.26E-18,2.11E-17,"full_name=thioglucoside glucohydrolase 1. thioglucoside glucohydrolase 1. member of Glycoside Hydrolase Family 1. encodes one of two known functional myrosinase enzymes in Arabidopsis. The enzyme catalyzes the hydrolysis of glucosinolates into compounds that are toxic to various microbes and herbivores.","AT2G01340","At17.1",1317.4,0.55986,0.082912,6.7525,1.45E-11,{"v":2.37e-10,"d":"2.37E-10"},"plastid movement impaired protein. Encodes a protein whose expression is responsive to nematode infection."]
["AT3G02150","PTF1",75.74,1.6001,0.25667,6.2341,{"v":4.54e-10,"d":"4.54E-10"},{"v":8.35e-09,"d":"8.35E-09"},"full_name=plastid transcription factor 1. plastid transcription factor 1. a chloroplast trans-acting factor of the psbD light-responsive promoter.TCP gene involved in heterochronic control of leaf differentiation.","AT3G25110","FaTA",940.09,-0.66527,0.10019,-6.6401,{"v":3.14e-11,"d":"3.14E-11"},{"v":5.58e-10,"d":"5.58E-10"},"full_name=fatA acyl-ACP thioesterase. fatA acyl-ACP thioesterase. Encodes a FatA acyl-ACP thioesterase","AT3G23990","HSP60",471.34,0.90588,0.12169,7.4442,{"v":9.75e-14,"d":"9.75E-14"},{"v":1.68e-12,"d":"1.68E-12"},"full_name=heat shock protein 60. heat shock protein 60. mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria.","AT4G14960","TUA6",50.062,-3.5827,0.40686,-8.8056,{"v":1.3E-18,"d":"1.30E-18"},2.17E-17,"full_name=Tubulin alpha-6. Tubulin/FtsZ family protein. Encodes an alpha-tubulin isoform required for right handed helical growth.","AT1G68560","XYL1",86.085,1.8189,0.26938,6.7523,1.46E-11,{"v":2.37e-10,"d":"2.37E-10"},"full_name=alpha-xylosidase 1. alpha-xylosidase 1. Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 3 of glycoside hydrolases."]
["AT4G01900","GLB1",2024.3,-0.66949,0.1074,-6.2339,{"v":4.55e-10,"d":"4.55E-10"},{"v":8.35e-09,"d":"8.35E-09"},"full_name=GLNB1 homolog. nitrogen regulatory P-II-like protein. encodes a PII protein that may function as part of a signal transduction network involved in perceiving the status of carbon and organic nitrogen. Forms a protein complex with N-acetylglutamate kinase and regulates the kinase activity by relieving the feedback inhibition of the kinase by arginine. Regulates acetyl-CoA carboxylase activity.","AT2G44980","ASG3",144.66,1.2374,0.18637,6.6393,{"v":3.15e-11,"d":"3.15E-11"},{"v":5.6e-10,"d":"5.60E-10"},"full_name=ALTERED SEED GERMINATION 3. SNF2 domain-containing protein / helicase domain-containing protein.","AT5G40382",null,234.74,1.1369,0.15279,7.4408,{"v":1E-13,"d":"1.00E-13"},{"v":1.73e-12,"d":"1.73E-12"},"Cytochrome c oxidase subunit Vc family protein.","AT1G62660","VI1",61.907,-3.8282,0.43485,-8.8035,1.33E-18,{"v":2.21e-17,"d":"2.21E-17"},"Glycosyl hydrolases family 32 protein.","AT4G22240","FBN1B",779.83,-0.69322,0.10278,-6.7446,{"v":1.53e-11,"d":"1.53E-11"},{"v":2.49e-10,"d":"2.49E-10"},"Plastid-lipid associated protein PAP / fibrillin family protein."]
["AT5G26860","LON1",112.51,1.3175,0.21138,6.2327,{"v":4.59e-10,"d":"4.59E-10"},{"v":8.41e-09,"d":"8.41E-09"},"full_name=lon protease 1. lon protease 1. Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins.","AT4G31340",null,863.06,-0.66795,0.10071,-6.6326,{"v":3.3e-11,"d":"3.30E-11"},{"v":5.86e-10,"d":"5.86E-10"},"myosin heavy chain-like protein.","AT5G63860","UVR8",1267.4,0.71615,0.096256,7.4401,1.01E-13,{"v":1.73e-12,"d":"1.73E-12"},"full_name=UVB-RESISTANCE 8. Regulator of chromosome condensation (RCC1) family protein. UV-B-specific signaling component that orchestrates expression of a range of genes with vital UV-protective functions. Located in the nucleus and the cytosol. Associates with chromatin via histones. UV-B light promotes URV8 protein accumulation in the nucleus. UVR8 interaction with COP1 is negatively regulated by RUP1 and RUP2.","AT2G20560","DNAJ",2522.7,0.8765,0.099596,8.8006,{"v":1.36e-18,"d":"1.36E-18"},{"v":2.27e-17,"d":"2.27E-17"},"DNAJ heat shock family protein.","AT5G47020",null,584.31,0.71501,0.10606,6.7415,{"v":1.57e-11,"d":"1.57E-11"},2.54E-10,"MraZ."]
["AT1G55210",null,344.66,-0.84792,0.13614,-6.2285,{"v":4.71e-10,"d":"4.71E-10"},{"v":8.63e-09,"d":"8.63E-09"},"Disease resistance-responsive (dirigent-like protein) family protein.","AT1G17220","FUG1",356.71,-0.88843,0.134,-6.6301,{"v":3.36e-11,"d":"3.36E-11"},{"v":5.96e-10,"d":"5.96E-10"},"full_name=fu-gaeri1. Translation initiation factor 2, small GTP-binding protein. Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal.","AT3G58570","RH52",320.86,-1.0787,0.14502,-7.4386,{"v":1.02e-13,"d":"1.02E-13"},1.75E-12,"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT1G71960","ABCG25",59.923,-3.1275,0.3554,-8.7998,1.37E-18,{"v":2.28e-17,"d":"2.28E-17"},"full_name=ATP-binding casette G25. ATP-binding casette family G25. Encodes a plasma membrane localized ABC transporter involved in abscisic acid transport and responses.","AT2G17640","ATSERAT3;1",630.82,-0.64774,0.096089,-6.741,{"v":1.57e-11,"d":"1.57E-11"},2.55E-10,"Trimeric LpxA-like enzymes superfamily protein. Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. Expression is induced after long-term sulfur starvation."]
["AT5G03300","ADK2",320.63,-0.88481,0.14216,-6.2242,{"v":4.84e-10,"d":"4.84E-10"},{"v":8.86e-09,"d":"8.86E-09"},"full_name=adenosine kinase 2. adenosine kinase 2. Encodes adenosine kinase 2 (ADK2), a typical, constitutively expressed housekeeping enzyme. Shows a high sequence identity with ADK1. Involved in salvage synthesis of adenylates and methyl recycling. Enzyme activity is substantially inhibited in roots, siliques and dry seeds by an unknown compound. May contribute to cytokinin interconversion.","AT5G62850","AtVEX1",107.37,-1.5268,0.23029,-6.6299,{"v":3.36e-11,"d":"3.36E-11"},{"v":5.96e-10,"d":"5.96E-10"},"full_name=VEGETATIVE CELL EXPRESSED1. Nodulin MtN3 family protein. Encodes a protein that is expressed in vegetative cells of pollen. A member of the SWEET sucrose efflux transporter family proteins.","AT4G18905",null,505.64,0.93845,0.12618,7.4375,1.03E-13,1.76E-12,"Transducin/WD40 repeat-like superfamily protein.","AT2G41225","OSR2",46.223,-5.4413,0.61845,-8.7982,{"v":1.39e-18,"d":"1.39E-18"},{"v":2.31e-17,"d":"2.31E-17"},"transmembrane protein. Encodes a protein of unknown function that is involved in regulation of cell expansion. Based on sequence similarity OSR2 is localized to the plasma membrane. It is expressed in organs that are undergoing cell expansion.","AT3G50970","LTI30",5613.4,0.55739,0.08269,6.7406,1.58E-11,2.55E-10,"full_name=LOW TEMPERATURE-INDUCED 30. dehydrin family protein. Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. LTI29 and LTI30 double overexpressors confer freeze tolerance. Located in membranes. mRNA upregulated by water deprivation and abscisic acid."]
["AT3G19370",null,91.983,-1.5008,0.24118,-6.2226,{"v":4.89e-10,"d":"4.89E-10"},{"v":8.94e-09,"d":"8.94E-09"},"filament-like protein (DUF869).","AT2G01275",null,32.189,2.9375,0.44374,6.6198,{"v":3.6e-11,"d":"3.60E-11"},{"v":6.37e-10,"d":"6.37E-10"},"RING/FYVE/PHD zinc finger superfamily protein.","AT1G04820","TUA4",142.61,-1.5577,0.20945,-7.4373,1.03E-13,{"v":1.77e-12,"d":"1.77E-12"},"full_name=tubulin alpha-4 chain. tubulin alpha-4 chain. Encodes an alpha tubulin isoform that is expressed in roots, leaves and flowers.","AT4G18280",null,390.05,1.2329,0.14014,8.798,{"v":1.39e-18,"d":"1.39E-18"},{"v":2.31e-17,"d":"2.31E-17"},"glycine-rich cell wall protein-like protein.","AT5G44750","REV1",452.56,-0.7858,0.1167,-6.7338,{"v":1.65e-11,"d":"1.65E-11"},{"v":2.67e-10,"d":"2.67E-10"},"DNA-directed DNA polymerase. Homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS)."]
["AT2G17840","ERD7",693.47,0.71187,0.11446,6.2196,{"v":4.99e-10,"d":"4.99E-10"},{"v":9.11e-09,"d":"9.11E-09"},"full_name=EARLY-RESPONSIVE TO DEHYDRATION 7. Senescence/dehydration-associated protein-like protein. Identified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis.","AT5G16550","LDIP",504.59,1.0032,0.15158,6.6183,3.63E-11,{"v":6.43e-10,"d":"6.43E-10"},"voltage-dependent L-type calcium channel subunit.","AT5G25350","EBF2",1520.2,1.2857,0.17291,7.4359,1.04E-13,{"v":1.78e-12,"d":"1.78E-12"},"full_name=EIN3-binding F box protein 2. EIN3-binding F box protein 2. Arabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway.","AT2G01820","TMK3",812.99,-0.90693,0.10309,-8.7973,{"v":1.4e-18,"d":"1.40E-18"},2.32E-17,"Leucine-rich repeat protein kinase family protein.","AT1G13780",null,170.11,1.1438,0.17,6.7282,{"v":1.72e-11,"d":"1.72E-11"},{"v":2.78e-10,"d":"2.78E-10"},"F-box/RNI-like/FBD-like domains-containing protein."]
["AT5G35960",null,325.02,0.87741,0.14108,6.2191,{"v":5e-10,"d":"5.00E-10"},{"v":9.12e-09,"d":"9.12E-09"},"Protein kinase family protein.","AT2G43580",null,25.374,8.1655,1.2341,6.6164,{"v":3.68e-11,"d":"3.68E-11"},{"v":6.5e-10,"d":"6.50E-10"},"Chitinase family protein.","AT5G47090",null,369.97,1.0439,0.14042,7.4343,{"v":1.05e-13,"d":"1.05E-13"},{"v":1.8E-12,"d":"1.80E-12"},"coiled-coil protein.","AT1G64230","UBC28",890.87,1.3544,0.15396,8.797,1.41E-18,{"v":2.33e-17,"d":"2.33E-17"},"full_name=ubiquitin-conjugating enzyme 28. ubiquitin-conjugating enzyme 28.","AT5G27610","ALY1",154.32,1.2068,0.17939,6.7274,{"v":1.73e-11,"d":"1.73E-11"},{"v":2.79e-10,"d":"2.79E-10"},"full_name=ALWAYS EARLY 1. protein ALWAYS EARLY 1."]
["AT3G10940","LSF2",227.43,-1.0278,0.16529,-6.2179,{"v":5.04e-10,"d":"5.04E-10"},{"v":9.18e-09,"d":"9.18E-09"},"full_name=LIKE SEX4 2. dual specificity protein phosphatase (DsPTP1) family protein. Encodes a protein with a predicted dual-specificity phosphatase domain, similar to the glucan phosphorylases SEX4 and LSF1, however, it lacks the carbohydrate binding domain present in those proteins. Has phosphoglucan phosphatase activity. It binds to starch and specifically hydrolyzes phosphate from the C3-position.","AT1G48920","NUC-L1",2266,0.71307,0.1078,6.6147,{"v":3.72e-11,"d":"3.72E-11"},{"v":6.57e-10,"d":"6.57E-10"},"full_name=nucleolin like 1. nucleolin like 1. Encodes ATNUC-L1 (NUCLEOLIN LIKE 1), the predominant form of the two nucleolin proteins found in Arabidopsis. This protein is involved in rRNA processing, ribosome biosynthesis, and vascular pattern formation. PARL1 localizes to the nucleolus and parl1 mutants accumulate elevated levels of the unspliced 35S pre-rRNA. parl1 mutants also have defects in cotyledon, leaf, sepal, and petal vein patterning and have reduced stature, reduced fertility, increased bushiness, and reduced root length. The sugar-induced expression of ribosome proteins is also reduced in parl1 mutants.","AT1G32790","CID11",1407.6,0.87284,0.11763,7.4201,{"v":1.17e-13,"d":"1.17E-13"},{"v":2E-12,"d":"2.00E-12"},"full_name=CTC-interacting domain 11. CTC-interacting domain 11. RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins.","AT1G78630","emb1473",465.62,1.3828,0.15725,8.794,1.44E-18,{"v":2.39e-17,"d":"2.39E-17"},"full_name=embryo defective 1473. Ribosomal protein L13 family protein.","AT3G20820",null,155.12,1.3011,0.19349,6.7243,{"v":1.76e-11,"d":"1.76E-11"},2.85E-10,"Leucine-rich repeat (LRR) family protein."]
["AT1G05540","ATDOA1",24.61,-3.3229,0.53476,-6.2137,{"v":5.17e-10,"d":"5.17E-10"},{"v":9.42e-09,"d":"9.42E-09"},"hypothetical protein (DUF295).","AT1G60710","ATB2",806.81,-0.74786,0.1131,-6.6121,3.79E-11,{"v":6.68e-10,"d":"6.68E-10"},"NAD(P)-linked oxidoreductase superfamily protein. Encodes ATB2.","AT2G05920","SBT1.8",1972.2,-0.77277,0.10429,-7.4099,{"v":1.26e-13,"d":"1.26E-13"},{"v":2.16e-12,"d":"2.16E-12"},"Subtilase family protein.","AT3G62860","MAGL12",65.59,3.2756,0.37252,8.7931,1.45E-18,{"v":2.4e-17,"d":"2.40E-17"},"alpha/beta-Hydrolases superfamily protein.","AT3G08970","ATERDJ3A",261.15,-1.0283,0.15294,-6.7238,{"v":1.77e-11,"d":"1.77E-11"},2.85E-10,"DNAJ heat shock N-terminal domain-containing protein. J domain protein localized in ER lumen. Can compensate for the growth defect in jem1 scj1 mutant yeast. Also shows similarity to HSP40 proteins and is induced by heat stress. At high temperatures, mutant alleles are not transmitted through the pollen due to defects in pollen tube growth."]
["AT4G16146",null,389.91,0.89961,0.14479,6.2134,{"v":5.18e-10,"d":"5.18E-10"},{"v":9.43e-09,"d":"9.43E-09"},"cAMP-regulated phosphoprotein 19-related protein.","AT1G20630","CAT1",2919.4,0.51677,0.0782,6.6082,{"v":3.89e-11,"d":"3.89E-11"},{"v":6.85e-10,"d":"6.85E-10"},"full_name=catalase 1. catalase 1. Catalyzes the reduction of hydrogen peroxide using heme group as cofactor. Protects cells from toxicity by H2O2.","AT1G55110","IDD7",732.58,0.88969,0.12009,7.4085,{"v":1.28e-13,"d":"1.28E-13"},2.18E-12,"full_name=indeterminate(ID)-domain 7. indeterminate(ID)-domain 7.","AT5G28919",null,510.37,0.93629,0.10649,8.7925,{"v":1.46e-18,"d":"1.46E-18"},{"v":2.42e-17,"d":"2.42E-17"},"hypothetical protein.","AT2G39340","SAC3A",737.73,-0.63883,0.095028,-6.7225,{"v":1.79e-11,"d":"1.79E-11"},{"v":2.87e-10,"d":"2.87E-10"},"full_name=yeast Sac3 homolog A. SAC3/GANP/Nin1/mts3/eIF-3 p25 family."]
["AT3G27850","RPL12-C",187.33,-1.1081,0.17838,-6.2121,{"v":5.23e-10,"d":"5.23E-10"},{"v":9.5e-09,"d":"9.50E-09"},"full_name=ribosomal protein L12-C. ribosomal protein L12-C. 50S ribosomal protein L12-C","AT1G65670","CYP702A1",623.87,1.043,0.15786,6.6067,{"v":3.93e-11,"d":"3.93E-11"},{"v":6.92e-10,"d":"6.92E-10"},"full_name=cytochrome P450, family 702, subfamily A, polypeptide 1. cytochrome P450, family 702, subfamily A, polypeptide 1. a member of the cytochrome P450 gene family. molecular function unknown.","AT3G06810","IBR3",1241.2,0.91092,0.12297,7.4077,{"v":1.29e-13,"d":"1.29E-13"},{"v":2.19e-12,"d":"2.19E-12"},"full_name=IBA-RESPONSE 3. acyl-CoA dehydrogenase-like protein. Encodes a protein with similarity to acyl-CoA dehydrogenases. Mutations in IBR3 render plants resistant to indole-3-butryic acid, a putative storage form of the biologically active auxin IAA (indole-3-acetic acid). IBR3 is hypothesized to carry out the second step in a &#946;-oxidation-like process of IBA metabolism in Arabidopsis. Though its subcellular location has not been determined, IBR3 has a peroxisomal targeting sequence and two other putative IBA metabolic enzymes (IBR1 and IBR10) can be found in this organelle. No specific enzymatic activity has been documented for IBR3, but double mutant analyses with CHY1 argue against a role for IBR3 in general fatty acid &#946;-oxidation.","AT1G51745","SL1",251.2,-1.3618,0.15492,-8.7903,1.49E-18,{"v":2.46e-17,"d":"2.46E-17"},"Tudor/PWWP/MBT superfamily protein.","AT5G10350","RRM",423.72,-0.82462,0.12267,-6.7224,{"v":1.79e-11,"d":"1.79E-11"},{"v":2.87e-10,"d":"2.87E-10"},"RNA-binding (RRM/RBD/RNP motifs) family protein."]
["AT5G14320","EMB3137",284.42,-0.87948,0.1416,-6.211,{"v":5.26e-10,"d":"5.26E-10"},{"v":9.56e-09,"d":"9.56E-09"},"full_name=EMBRYO DEFECTIVE 3137. Ribosomal protein S13/S18 family.","AT2G21050","LAX2",79.748,-1.7234,0.26097,-6.604,{"v":4e-11,"d":"4.00E-11"},{"v":7.04e-10,"d":"7.04E-10"},"full_name=like AUXIN RESISTANT 2. like AUXIN RESISTANT 2. Encodes LAX2 (LIKE AUXIN RESISTANT), a member of the AUX1 LAX family of auxin influx carriers. Required for the establishment of embryonic root cell organization.","AT1G55350","DEK1",346.17,-1.0274,0.13885,-7.3994,1.37E-13,2.33E-12,"full_name=DEFECTIVE KERNEL 1. calpain-type cysteine protease family. Similar to maize DEK1, a gene encoding a membrane protein of the calpain gene superfamily required for aleurone cell development in the endosperm of maize grains. A key component of the embryonic L1 cell-layer specification pathway. It localizes to membranes and undergoes intramolecular autolytic cleavage events that release the calpain domain into the cytoplasm.","AT1G70580","AOAT2",2210.7,-0.86203,0.098067,-8.7902,1.49E-18,{"v":2.46e-17,"d":"2.46E-17"},"full_name=alanine-2-oxoglutarate aminotransferase 2. alanine-2-oxoglutarate aminotransferase 2. Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.","AT1G15950","CCR1",584.53,-0.85056,0.12653,-6.7219,{"v":1.79e-11,"d":"1.79E-11"},{"v":2.88e-10,"d":"2.88E-10"},"full_name=cinnamoyl coa reductase 1. cinnamoyl coa reductase 1. Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis."]
["AT3G07580",null,51.308,-2.0174,0.32496,-6.2081,{"v":5.36e-10,"d":"5.36E-10"},{"v":9.72e-09,"d":"9.72E-09"},"hypothetical protein.","AT1G52660",null,104.2,1.5058,0.2283,6.5958,{"v":4.23e-11,"d":"4.23E-11"},{"v":7.43e-10,"d":"7.43E-10"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT4G14960","TUA6",180.18,-1.5116,0.2045,-7.3917,{"v":1.45e-13,"d":"1.45E-13"},{"v":2.47e-12,"d":"2.47E-12"},"full_name=Tubulin alpha-6. Tubulin/FtsZ family protein. Encodes an alpha-tubulin isoform required for right handed helical growth.","AT5G17540",null,55.843,5.2008,0.59192,8.7863,1.55E-18,2.54E-17,"HXXXD-type acyl-transferase family protein.","AT1G79230","MST1",1824.7,-0.57623,0.085729,-6.7215,{"v":1.8e-11,"d":"1.80E-11"},{"v":2.89e-10,"d":"2.89E-10"},"full_name=mercaptopyruvate sulfurtransferase 1. mercaptopyruvate sulfurtransferase 1. encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification."]
["AT5G58090",null,489.13,0.74088,0.11934,6.2079,{"v":5.37e-10,"d":"5.37E-10"},{"v":9.73e-09,"d":"9.73E-09"},"O-Glycosyl hydrolases family 17 protein.","AT5G10740",null,373.22,0.84739,0.12854,6.5925,{"v":4.32e-11,"d":"4.32E-11"},{"v":7.59e-10,"d":"7.59E-10"},"Protein phosphatase 2C family protein.","AT4G27250",null,423.34,-1.1281,0.1527,-7.3878,1.49E-13,{"v":2.54e-12,"d":"2.54E-12"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT1G67280","ATGLYI6",1422.7,0.74782,0.085112,8.7862,1.55E-18,2.54E-17,"Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.","AT3G54510",null,532.69,-0.69416,0.10333,-6.7182,{"v":1.84e-11,"d":"1.84E-11"},{"v":2.95e-10,"d":"2.95E-10"},"Early-responsive to dehydration stress protein (ERD4)."]
["AT4G27160","SESA3",903420,0.57825,0.093268,6.1999,{"v":5.65e-10,"d":"5.65E-10"},{"v":1.02E-8,"d":"1.02E-08"},"full_name=seed storage albumin 3. seed storage albumin 3.","AT1G56220",null,1050.3,-0.7237,0.10979,-6.5919,4.34E-11,{"v":7.61e-10,"d":"7.61E-10"},"Dormancy/auxin associated family protein.","AT5G42570",null,691.43,0.92762,0.12584,7.3716,{"v":1.69e-13,"d":"1.69E-13"},{"v":2.87e-12,"d":"2.87E-12"},"B-cell receptor-associated 31-like protein.","AT5G03795",null,687.69,-0.83179,0.0947,-8.7834,1.59E-18,{"v":2.61e-17,"d":"2.61E-17"},"Exostosin family protein.","AT4G34910",null,493.45,0.71953,0.10713,6.7163,{"v":1.86e-11,"d":"1.86E-11"},2.99E-10,"P-loop containing nucleoside triphosphate hydrolases superfamily protein."]
["AT1G15430",null,209.59,1.0082,0.16276,6.1944,{"v":5.85e-10,"d":"5.85E-10"},{"v":1.06e-08,"d":"1.06E-08"},"hypothetical protein (DUF1644).","AT1G75280",null,1377.9,0.92256,0.13996,6.5915,{"v":4.36e-11,"d":"4.36E-11"},{"v":7.63e-10,"d":"7.63E-10"},"NmrA-like negative transcriptional regulator family protein. isoflavone reductase, putative, identical to SP:P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: isoflavone reductase. Involved in response to oxidative stress.","AT2G03340","WRKY3",680.77,0.98562,0.13373,7.3703,{"v":1.7e-13,"d":"1.70E-13"},2.89E-12,"full_name=WRKY DNA-binding protein 3. WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3).","AT1G75210",null,439.75,-0.98435,0.11208,-8.7824,{"v":1.6E-18,"d":"1.60E-18"},2.63E-17,"HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase.","AT5G22620",null,178.18,-1.2053,0.17952,-6.7138,{"v":1.9e-11,"d":"1.90E-11"},{"v":3.03e-10,"d":"3.03E-10"},"phosphoglycerate/bisphosphoglycerate mutase family protein. encodes a putative 2-carboxy-D-arabinitol 1-phosphate phosphatase"]
["AT4G30880",null,469.55,-8.7053,1.4079,-6.1834,6.28E-10,{"v":1.13E-8,"d":"1.13E-08"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT3G09350","Fes1A",176.46,1.1843,0.17968,6.591,{"v":4.37e-11,"d":"4.37E-11"},{"v":7.65e-10,"d":"7.65E-10"},"full_name=Fes1A. Fes1A. Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70. Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance. Does not have nucleotide exchange factor activity in vitro.","AT5G25280",null,454.97,1.3244,0.17985,7.3641,1.78E-13,{"v":3.03e-12,"d":"3.03E-12"},"serine-rich protein-like protein.","AT4G08900","ARGAH1",472.31,1.1182,0.12753,8.7688,1.81E-18,{"v":2.96e-17,"d":"2.96E-17"},"full_name=arginine amidohydrolase 1. arginase. Encodes an arginase, likely to be involved in polyamine biosynthesis in pollen.","AT2G17650",null,154.8,-1.2311,0.18342,-6.7121,{"v":1.92e-11,"d":"1.92E-11"},{"v":3.07e-10,"d":"3.07E-10"},"AMP-dependent synthetase and ligase family protein."]
["AT5G02580",null,44.512,2.2114,0.35768,6.1827,{"v":6.3E-10,"d":"6.30E-10"},{"v":1.14E-8,"d":"1.14E-08"},"argininosuccinate lyase.","AT3G42670","CHR38",57.319,-2.0984,0.3184,-6.5904,{"v":4.39e-11,"d":"4.39E-11"},{"v":7.67e-10,"d":"7.67E-10"},"full_name=chromatin remodeling 38. chromatin remodeling 38. Encodes a nuclear localized SNF domain containing protein involved in RNA silencing. Mutants were identified in a screen for defects in the spread of RNA silencing. CLSY1 may affect production of dsRNA from the locus to be silenced.","AT3G20250","PUM5",1559.2,0.88929,0.12081,7.3612,{"v":1.82e-13,"d":"1.82E-13"},3.09E-12,"full_name=pumilio 5. pumilio 5. Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.","AT2G33520","ATHCYSTM7",1832.4,-0.71955,0.082063,-8.7683,1.81E-18,{"v":2.97e-17,"d":"2.97E-17"},"cysteine-rich/transmembrane domain protein A.","AT1G12970","PIRL3",247.07,1.0379,0.1548,6.7048,{"v":2.02e-11,"d":"2.02E-11"},{"v":3.22e-10,"d":"3.22E-10"},"full_name=plant intracellular ras group-related LRR 3. plant intracellular ras group-related LRR 3. Encodes PIRL3, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction."]
["AT5G49180","PME58",254.84,-1.1973,0.19421,-6.1646,{"v":7.07e-10,"d":"7.07E-10"},{"v":1.27E-8,"d":"1.27E-08"},"Plant invertase/pectin methylesterase inhibitor superfamily. Encodes a putative pectin methylesterase. The gene is preferentially expressed in floral buds.","AT5G58000","RTN21",585.52,-0.74394,0.11305,-6.5805,{"v":4.69e-11,"d":"4.69E-11"},{"v":8.15e-10,"d":"8.15E-10"},"Reticulon family protein.","AT4G26420","GAMT1",370.52,-1.3765,0.18767,-7.3348,{"v":2.22e-13,"d":"2.22E-13"},{"v":3.74e-12,"d":"3.74E-12"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. A member of the Arabidopsis SABATH methyltransferase gene family. Encodes GAMT1, a methyltransferase that uses S-adenosine-L-methionine (SAM) as a methyl donor to methylate the carboxyl group of GAs, resulting in the methyl esters of GAs (MeGAs). Expressed most highly in the siliques during seed development.","AT4G35050","MSI3",176.16,1.56,0.17843,8.7431,{"v":2.27e-18,"d":"2.27E-18"},{"v":3.69e-17,"d":"3.69E-17"},"full_name=MULTICOPY SUPPRESSOR OF IRA1 3. Transducin family protein / WD-40 repeat family protein. Encodes a WD-40 repeat protein similar to yeast MSI1. The predicted protein has a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase","AT3G20130","CYP705A22",101.35,1.5757,0.2352,6.6995,2.09E-11,{"v":3.32e-10,"d":"3.32E-10"},"full_name=cytochrome P450, family 705, subfamily A, polypeptide 22. cytochrome P450, family 705, subfamily A, polypeptide 22. Encodes a member of the CYP705A family of cytochrome P450 enzymes. Mutants show altered gravitropic responses."]
["AT5G46280","MCM3",26.301,-3.1926,0.51982,-6.1417,{"v":8.16e-10,"d":"8.16E-10"},{"v":1.46E-8,"d":"1.46E-08"},"full_name=MINICHROMOSOME MAINTENANCE 3. Minichromosome maintenance (MCM2/3/5) family protein.","AT1G17430",null,2587,0.6231,0.094801,6.5728,{"v":4.94e-11,"d":"4.94E-11"},{"v":8.54e-10,"d":"8.54E-10"},"alpha/beta-Hydrolases superfamily protein.","AT5G41600","BTI3",78.645,-1.8883,0.25786,-7.3229,{"v":2.43e-13,"d":"2.43E-13"},{"v":4.07e-12,"d":"4.07E-12"},"full_name=VIRB2-interacting protein 3. VIRB2-interacting protein 3.","AT5G59480",null,41.186,-4.1301,0.47307,-8.7304,2.54E-18,{"v":4.11e-17,"d":"4.11E-17"},"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein.","AT3G59140","ABCC10",207.82,1.1221,0.16817,6.6725,{"v":2.52e-11,"d":"2.52E-11"},{"v":3.97e-10,"d":"3.97E-10"},"full_name=ATP-binding cassette C10. multidrug resistance-associated protein 14. member of MRP subfamily"]
["AT1G62570","FMO GS-OX4",96.024,1.442,0.23529,6.1286,{"v":8.87e-10,"d":"8.87E-10"},{"v":1.57e-08,"d":"1.57E-08"},"full_name=flavin-monooxygenase glucosinolate S-oxygenase 4. flavin-monooxygenase glucosinolate S-oxygenase 4. belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates","AT4G20270","BAM3",97.869,-1.7155,0.26209,-6.5454,{"v":5.93e-11,"d":"5.93E-11"},{"v":1.02E-9,"d":"1.02E-09"},"full_name=BARELY ANY MERISTEM 3. Leucine-rich receptor-like protein kinase family protein. Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function.","AT3G06035",null,55.729,-2.3067,0.31569,-7.3068,2.73E-13,4.56E-12,"Glycoprotein membrane precursor GPI-anchored.","AT3G23780","NRPD2A",74.599,2.6264,0.30203,8.6959,{"v":3.44e-18,"d":"3.44E-18"},{"v":5.54e-17,"d":"5.54E-17"},"full_name=nuclear RNA polymerase D2A. nuclear RNA polymerase D2A. This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin.","AT2G46390","SDH8",561.24,-1.1783,0.17716,-6.6507,2.92E-11,{"v":4.58e-10,"d":"4.58E-10"},"full_name=succinate dehydrogenase 8. succinate dehydrogenase subunit. predicted to encode subunit 8 of mitochondrial complex II and to participate in the respiratory chain"]
["AT1G63090","PP2-A11",325.24,1.2106,0.1979,6.1171,{"v":9.53e-10,"d":"9.53E-10"},{"v":1.68e-08,"d":"1.68E-08"},"full_name=phloem protein 2-A11. phloem protein 2-A11.","AT3G17130",null,525.8,-1.0072,0.15402,-6.5389,{"v":6.2e-11,"d":"6.20E-11"},{"v":1.06e-09,"d":"1.06E-09"},"Plant invertase/pectin methylesterase inhibitor superfamily protein.","AT1G19570","DHAR1",2239,-0.72123,0.098899,-7.2926,{"v":3.04e-13,"d":"3.04E-13"},{"v":5.04e-12,"d":"5.04E-12"},"full_name=dehydroascorbate reductase. dehydroascorbate reductase. Encodes a member of the dehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica.","AT4G35140",null,296.27,-1.1818,0.13604,-8.6869,{"v":3.72e-18,"d":"3.72E-18"},{"v":5.97e-17,"d":"5.97E-17"},"Transducin/WD40 repeat-like superfamily protein.","AT1G65090",null,6958,-0.38828,0.058461,-6.6418,{"v":3.1e-11,"d":"3.10E-11"},{"v":4.84e-10,"d":"4.84E-10"},"nucleolin."]
["AT4G21680","NRT1.8",1058.1,0.92468,0.15151,6.1033,{"v":1.04e-09,"d":"1.04E-09"},{"v":1.83e-08,"d":"1.83E-08"},"full_name=NITRATE TRANSPORTER 1.8. NITRATE TRANSPORTER 1.8. Encodes a nitrate transporter (NRT1.8). Functions in nitrate removal from the xylem sap. Mediates cadmium tolerance.","AT1G25270","UMAMIT24",429.77,-0.89988,0.13793,-6.5241,{"v":6.84e-11,"d":"6.84E-11"},{"v":1.16e-09,"d":"1.16E-09"},"full_name=Usually multiple acids move in and out Transporters 24. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT4G16160","ATOEP16-2",12551,0.83517,0.11469,7.2821,{"v":3.29e-13,"d":"3.29E-13"},{"v":5.42e-12,"d":"5.42E-12"},"Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein. Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family. Two OEP16 genes are closely related to each other and are conserved in all land plants, OEP16-2, also named OEP16-S, and OEP16-1 (renamed OEP16-L) are result of the gene duplication event that occurred prior to divergence of bryophytes and seed plants. Predominantly expressed in seed and is not inducible by cold treatment. atOEP16-S gained an additional exon. The promoter region of atOEP16-S (but not atOEP16-L) contains multiple G-box ABA-responsive elements. The atOEP16-S promoter conferred developmentally regulated seed- and pollen-specific GUS expression in tobacco.","AT1G16190","RAD23A",341.73,-1.1135,0.12842,-8.6704,{"v":4.31e-18,"d":"4.31E-18"},6.87E-17,"full_name=RADIATION SENSITIVE23A. Rad23 UV excision repair protein family. Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.","AT5G09250","KIWI",492.51,-0.93224,0.14063,-6.6288,{"v":3.38e-11,"d":"3.38E-11"},{"v":5.26e-10,"d":"5.26E-10"},"ssDNA-binding transcriptional regulator. putative transcriptional co-activator (KIWI) mRNA, complete"]
["AT3G52340","SPP2",448.42,0.74822,0.12287,6.0895,{"v":1.13E-9,"d":"1.13E-09"},{"v":1.98e-08,"d":"1.98E-08"},"full_name=sucrose-6F-phosphate phosphohydrolase 2. sucrose-6F-phosphate phosphohydrolase 2. sucrose-phosphatase (SPP2)","AT2G46690","SAUR32",134.6,-1.3751,0.2116,-6.4984,{"v":8.12e-11,"d":"8.12E-11"},{"v":1.37E-9,"d":"1.37E-09"},"SAUR-like auxin-responsive protein family.","AT2G22125","CSI1",516.41,-0.90105,0.12394,-7.2698,{"v":3.6e-13,"d":"3.60E-13"},{"v":5.91e-12,"d":"5.91E-12"},"full_name=cellulose synthase-interactive protein 1. binding protein. Encodes a protein involved in cell elongation in root and anther filaments. Mutants have greater cell volumes in root tissues and have additive phenotypes with other cell expansion mutants such as those carrying mutations in COB, QUI and POM1 loci. POM2/CSI1 promotes Cellulose Synthase and microtubule co-alignment.","AT5G57015","ckl12",50.029,-3.1556,0.36469,-8.6528,{"v":5.02e-18,"d":"5.02E-18"},{"v":7.97e-17,"d":"7.97E-17"},"full_name=casein kinase I-like 12. casein kinase I-like 12.","AT5G49300","GATA16",154.83,1.2735,0.19254,6.6144,{"v":3.73e-11,"d":"3.73E-11"},{"v":5.77e-10,"d":"5.77E-10"},"full_name=GATA transcription factor 16. GATA transcription factor 16. Encodes a member of the GATA factor family of zinc finger transcription factors."]
["AT1G64810","APO1",327.24,0.8588,0.14138,6.0743,{"v":1.25E-9,"d":"1.25E-09"},{"v":2.16e-08,"d":"2.16E-08"},"full_name=ACCUMULATION OF PHOTOSYSTEM ONE 1. APO RNA-binding protein (DUF794). Encodes a chloroplast localized RNA binding protein that is involved in group II intron splicing. Splicing defects can account for the loss of photosynthetic complexes in apo1 mutants.","AT2G35620","FEI2",244.93,-0.9806,0.15192,-6.4547,1.08E-10,{"v":1.82e-09,"d":"1.82E-09"},"full_name=FEI 2. Leucine-rich repeat protein kinase family protein. Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots.","AT4G34590","GBF6",158.94,-1.8312,0.25239,-7.2555,{"v":4e-13,"d":"4.00E-13"},{"v":6.52e-12,"d":"6.52E-12"},"full_name=G-box binding factor 6. G-box binding factor 6. Encodes a basic domain leucine zipper (bZip) transcription factor bZIP11. Translation is repressed by sucrose. Directly regulates gene expression of ASN1 and ProDH2, which are enzyme-coding genes involved in amino acid metabolism.","AT2G46750","GulLO2",65.109,-6.7529,0.78243,-8.6307,{"v":6.1e-18,"d":"6.10E-18"},{"v":9.61e-17,"d":"9.61E-17"},"full_name=L -gulono-1,4-lactone ( L -GulL) oxidase 2. D-arabinono-1,4-lactone oxidase family protein. Encodes a homolog of rat L-gulono-1,4-lactone (L-GulL) oxidase that is involved in the biosynthesis of L-ascorbic acid.","AT2G31585",null,638.29,0.80231,0.12144,6.6066,{"v":3.93e-11,"d":"3.93E-11"},{"v":6.04e-10,"d":"6.04E-10"},"other_RNA. Unknown gene"]
["AT1G60550","ECHID",131.26,-1.2437,0.20496,-6.0684,{"v":1.29e-09,"d":"1.29E-09"},{"v":2.23e-08,"d":"2.23E-08"},"full_name=enoyl-CoA hydratase/isomerase D. enoyl-CoA hydratase/isomerase D.","AT3G48270","CYP71A26",1128.5,0.93153,0.1447,6.4376,1.21E-10,{"v":2.03e-09,"d":"2.03E-09"},"full_name=cytochrome P450, family 71, subfamily A, polypeptide 26. cytochrome P450, family 71, subfamily A, polypeptide 26. putative cytochrome P450","AT5G52860","ABCG8",45.432,-3.049,0.42092,-7.2437,{"v":4.37e-13,"d":"4.37E-13"},{"v":7.08e-12,"d":"7.08E-12"},"full_name=ATP-binding cassette G8. ABC-2 type transporter family protein.","AT3G53630",null,574.49,1.1917,0.1384,8.6108,{"v":7.25e-18,"d":"7.25E-18"},1.14E-16,"hypothetical protein.","AT1G12010","ACO3",55.606,-3.0103,0.45678,-6.5902,{"v":4.39e-11,"d":"4.39E-11"},{"v":6.71e-10,"d":"6.71E-10"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. Encodes a protein that appears to have 1-amino-cyclopropane-1-carboxylic acid oxidase activity based on mutant analyses."]
["AT5G58070","TIL",3735.3,1.0027,0.16559,6.0554,{"v":1.4e-09,"d":"1.40E-09"},{"v":2.41e-08,"d":"2.41E-08"},"full_name=temperature-induced lipocalin. temperature-induced lipocalin. Encodes a temperature-induced lipocalin TIL1. Involved in thermotolerance. Peripherally associated with plasma membrane.","AT3G25950",null,70.089,1.7184,0.26769,6.4193,{"v":1.37e-10,"d":"1.37E-10"},{"v":2.28E-9,"d":"2.28E-09"},"TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein.","AT2G31060","EMB2785",274.01,1.1095,0.15341,7.2323,4.75E-13,{"v":7.66e-12,"d":"7.66E-12"},"full_name=EMBRYO DEFECTIVE 2785. elongation factor family protein.","AT1G05450",null,88.042,-7.6295,0.88653,-8.606,{"v":7.57e-18,"d":"7.57E-18"},{"v":1.18e-16,"d":"1.18E-16"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein. Encodes a Protease inhibitor/seed storage/LTP family protein","AT2G18700","TPS11",2320.3,0.78583,0.1195,6.5761,{"v":4.83e-11,"d":"4.83E-11"},{"v":7.34e-10,"d":"7.34E-10"},"full_name=trehalose phosphatase/synthase 11. trehalose phosphatase/synthase 11. Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain."]
["AT5G48230","ACAT2",899.35,0.62013,0.10274,6.0359,{"v":1.58e-09,"d":"1.58E-09"},{"v":2.7E-8,"d":"2.70E-08"},"full_name=acetoacetyl-CoA thiolase 2. acetoacetyl-CoA thiolase 2. Encodes an acetoacetyl-CoA thiolase that generates the bulk of the acetoacetyl-CoA precursor needed for the cytosolic localized, mevalonate-derived isoprenoids biosynthetic pathway. Loss-of-function mutants are embryo lethal.","AT2G29460","GSTU4",329.96,1.1265,0.17564,6.4138,1.42E-10,{"v":2.35e-09,"d":"2.35E-09"},"full_name=glutathione S-transferase tau 4. glutathione S-transferase tau 4. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","AT1G21740",null,73.227,-2.1935,0.30378,-7.2206,{"v":5.18e-13,"d":"5.18E-13"},{"v":8.31e-12,"d":"8.31E-12"},"DUF630 family protein, putative (DUF630 and DUF632).","AT1G11300","EGM1",198.53,1.9517,0.22728,8.5872,{"v":8.91e-18,"d":"8.91E-18"},1.38E-16,"G-type lectin S-receptor-like Serine/Threonine-kinase. The annotation for At1g11300 in TAIR10 is incorrect. This locus has been split into two At1g11300 (symbol: EGM1) and At1g11305 (symbol: EGM2) (Olivier Loudet, personal communication, 2013-04-03). See Comment field for revised annotation.","AT3G17090","PP2C.D2",336.85,0.92008,0.14039,6.5536,{"v":5.62e-11,"d":"5.62E-11"},{"v":8.5e-10,"d":"8.50E-10"},"Protein phosphatase 2C family protein."]
["AT5G13980",null,871.66,-0.77204,0.12804,-6.0296,{"v":1.64e-09,"d":"1.64E-09"},{"v":2.81E-8,"d":"2.81E-08"},"Glycosyl hydrolase family 38 protein.","AT1G23740","AOR",51.178,-2.0425,0.31883,-6.4063,1.49E-10,{"v":2.47e-09,"d":"2.47E-09"},"full_name=alkenal/one oxidoreductase. Oxidoreductase, zinc-binding dehydrogenase family protein. AOR is an alkenal/one oxidoreductase that acts on compounds with unsaturated alpha,beta-carbonyls. The activity of this enzyme with a number of substrates, including acrolein and 3-buten-2-one, was demonstrated in vitro using a truncated form of the protein that lacked approximately 80 of the first amino acids. This protein appears to localize to the chloroplast where it likely helps to maintain the photosynthetic process by detoxifying reactive carbonyls formed during lipid peroxidation.","AT5G62520","SRO5",192.71,-1.5967,0.22124,-7.2167,{"v":5.32e-13,"d":"5.32E-13"},{"v":8.54e-12,"d":"8.54E-12"},"full_name=similar to RCD one 5. similar to RCD one 5. Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.","AT4G28240","WIP1",377.41,1.7595,0.20513,8.5777,{"v":9.68e-18,"d":"9.68E-18"},{"v":1.5E-16,"d":"1.50E-16"},"Wound-responsive family protein.","AT4G16680",null,95.778,-1.5312,0.2337,-6.5522,{"v":5.67e-11,"d":"5.67E-11"},{"v":8.57e-10,"d":"8.57E-10"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein."]
["AT1G48300","DGAT3",1817.4,0.57989,0.096643,6.0003,{"v":1.97E-9,"d":"1.97E-09"},{"v":3.33E-8,"d":"3.33E-08"},"full_name=diacylglycerol acyltransferase 3. diacylglycerol acyltransferase.","AT1G42960",null,853.91,-0.66694,0.10437,-6.3903,1.66E-10,{"v":2.71e-09,"d":"2.71E-09"},"inner membrane localized protein. expressed protein localized to the inner membrane of the chloroplast.","AT2G40000","HSPRO2",317.68,1.6814,0.23371,7.1946,{"v":6.27e-13,"d":"6.27E-13"},{"v":9.96e-12,"d":"9.96E-12"},"full_name=ortholog of sugar beet HS1 PRO-1 2. ortholog of sugar beet HS1 PRO-1 2.","AT1G79840","GL2",40.947,-5.0735,0.59434,-8.5362,{"v":1.39e-17,"d":"1.39E-17"},{"v":2.13e-16,"d":"2.13E-16"},"full_name=GLABRA 2. HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein. Glabra 2, a homeodomain protein affects epidermal cell identity including trichomes, root hairs, and seed coat. It also down-regulates seed oil content. Expressed in atrichoblasts and required to suppress root hair development. Also expressed abundantly during early seed development. Directly regulated by WER.","AT2G41210","PIP5K5",477.48,0.74994,0.11512,6.5147,{"v":7.28e-11,"d":"7.28E-11"},{"v":1.09E-9,"d":"1.09E-09"},"full_name=phosphatidylinositol- 4-phosphate 5-kinase 5. phosphatidylinositol- 4-phosphate 5-kinase 5. Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology."]
["AT3G04120","GAPC1",3185,-0.67552,0.11265,-5.9964,{"v":2.02e-09,"d":"2.02E-09"},{"v":3.41e-08,"d":"3.41E-08"},"full_name=glyceraldehyde-3-phosphate dehydrogenase C subunit 1. glyceraldehyde-3-phosphate dehydrogenase C subunit 1. encodes cytosolic GADPH (C subunit) involved in the glycolytic pathway but also interacts with H2O2 potentially placing it in a signalling cascade induced by ROS.","AT1G63120","RBL2",609.96,0.73195,0.11468,6.3827,{"v":1.74e-10,"d":"1.74E-10"},{"v":2.85e-09,"d":"2.85E-09"},"full_name=RHOMBOID-like 2. RHOMBOID-like 2. AtRBL2 has been identified as a rhomboid protein involved in regulated intramembrane proteolysis (RIP). The enzyme has the proteolytic activity and substrate specificity comparable to the Drosophila Rho-1 protein.","AT1G34370","STOP1",613.9,1.2585,0.17493,7.1943,{"v":6.28e-13,"d":"6.28E-13"},{"v":9.97e-12,"d":"9.97E-12"},"full_name=sensitive to proton rhizotoxicity 1. C2H2 and C2HC zinc fingers superfamily protein. Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity. Cell wall of the mutant is unstable in low pH medium (pH 4.5) in low Ca solution. This would mediate Ca-alleviation of low pH stress through pectin-Ca interaction.","AT4G32290",null,963.59,-0.9095,0.10656,-8.5351,{"v":1.4e-17,"d":"1.40E-17"},{"v":2.15e-16,"d":"2.15E-16"},"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein.","AT2G28780",null,257.16,-1.0785,0.16556,-6.5145,{"v":7.29e-11,"d":"7.29E-11"},{"v":1.09E-9,"d":"1.09E-09"},"P-hydroxybenzoic acid efflux pump subunit."]
["AT5G64870","FLOT3",29.001,-2.7211,0.45478,-5.9833,{"v":2.19e-09,"d":"2.19E-09"},{"v":3.68e-08,"d":"3.68E-08"},"SPFH/Band 7/PHB domain-containing membrane-associated protein family.","AT1G60000",null,22.444,-7.8791,1.2392,-6.3581,{"v":2.04e-10,"d":"2.04E-10"},{"v":3.33e-09,"d":"3.33E-09"},"RNA-binding (RRM/RBD/RNP motifs) family protein.","AT3G08860","PYD4",1372.9,-1.1048,0.15378,-7.1843,{"v":6.76e-13,"d":"6.76E-13"},{"v":1.07e-11,"d":"1.07E-11"},"full_name=PYRIMIDINE 4. PYRIMIDINE 4. Encodes a protein that is predicted to have beta-alanine aminotransferase activity.","AT3G05120","GID1A",599.82,1.0622,0.12489,8.5053,{"v":1.81e-17,"d":"1.81E-17"},{"v":2.77e-16,"d":"2.77E-16"},"full_name=GA INSENSITIVE DWARF1A. alpha/beta-Hydrolases superfamily protein. Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4. The DELLA region alone can interact with GID1A in GA-dependent manner in a Y2H assay.","AT1G51430",null,170.75,-1.1706,0.1804,-6.4892,{"v":8.63e-11,"d":"8.63E-11"},{"v":1.28e-09,"d":"1.28E-09"},"cTAGE family protein."]
["AT4G36648",null,1132.1,0.74738,0.12512,5.9734,{"v":2.32e-09,"d":"2.32E-09"},{"v":3.89e-08,"d":"3.89E-08"},"other_RNA. Unknown gene","AT1G60970",null,326.53,-0.84364,0.13284,-6.351,{"v":2.14e-10,"d":"2.14E-10"},{"v":3.47e-09,"d":"3.47E-09"},"SNARE-like superfamily protein.","AT5G28540","BIP1",1415.2,-0.80845,0.11268,-7.1748,{"v":7.24e-13,"d":"7.24E-13"},{"v":1.14e-11,"d":"1.14E-11"},"heat shock protein 70 (Hsp 70) family protein. Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.","AT1G75730",null,63.821,-3.0397,0.35866,-8.4752,2.35E-17,{"v":3.56e-16,"d":"3.56E-16"},"hypothetical protein.","AT3G44730","KP1",405.97,-0.84479,0.13065,-6.4661,1.01E-10,{"v":1.49E-9,"d":"1.49E-09"},"full_name=kinesin-like protein 1. kinesin-like protein 1."]
["AT3G23760",null,219.13,-0.9909,0.16627,-5.9598,{"v":2.53e-09,"d":"2.53E-09"},{"v":4.2e-08,"d":"4.20E-08"},"transferring glycosyl group transferase.","AT1G21740",null,213.77,-1.0237,0.16172,-6.3301,{"v":2.45e-10,"d":"2.45E-10"},{"v":3.95e-09,"d":"3.95E-09"},"DUF630 family protein, putative (DUF630 and DUF632).","AT3G16570","RALF23",107.11,-1.9929,0.27843,-7.1576,{"v":8.21e-13,"d":"8.21E-13"},1.28E-11,"full_name=rapid alkalinization factor 23. rapid alkalinization factor 23. Encodes RALF23, a member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. RALF23 is significantly downregulated by brassinolide treatment of seedlings. Overexpression of AtRALF23 impairs brassinolide-induced hypocotyls elongation, and mature overexpressing plants are shorter and bushier. RALF23 overexpression produces slower growing seedlings with roots that have reduced capacity to acidify the rhizosphere.","AT1G62210",null,62.568,-6.7018,0.79153,-8.467,{"v":2.52e-17,"d":"2.52E-17"},{"v":3.81e-16,"d":"3.81E-16"},"hypothetical protein.","AT1G18840","IQD30",274.46,-0.9164,0.14182,-6.4617,1.04E-10,{"v":1.52e-09,"d":"1.52E-09"},"full_name=IQ-domain 30. IQ-domain 30."]
["AT3G22400","LOX5",2286.5,-0.68602,0.1153,-5.9498,{"v":2.68e-09,"d":"2.68E-09"},{"v":4.45e-08,"d":"4.45E-08"},"PLAT/LH2 domain-containing lipoxygenase family protein. Encodes lipoxygenase5 (LOX5). LOX5 activity in roots facilitates green peach aphid colonization of Arabidopsis foliage by promoting green peach aphid feeding from sieve element and water consumption from xylem.","AT4G17140",null,1693.4,0.61742,0.097723,6.3181,{"v":2.65e-10,"d":"2.65E-10"},{"v":4.25E-9,"d":"4.25E-09"},"pleckstrin homology (PH) domain-containing protein.","AT1G05680","UGT74E2",27.508,4.4998,0.6296,7.147,{"v":8.87e-13,"d":"8.87E-13"},1.38E-11,"full_name=Uridine diphosphate glycosyltransferase 74E2. Uridine diphosphate glycosyltransferase 74E2. Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.","AT5G35360","CAC2",137.57,-1.96,0.23207,-8.4457,{"v":3.02e-17,"d":"3.02E-17"},{"v":4.54e-16,"d":"4.54E-16"},"full_name=acetyl Co-enzyme a carboxylase biotin carboxylase subunit. acetyl Co-enzyme a carboxylase biotin carboxylase subunit. Encodes biotin carboxylase subunit (CAC2).","AT5G42300","UBL5",1594.6,-0.64491,0.099921,-6.4542,1.09E-10,{"v":1.59e-09,"d":"1.59E-09"},"full_name=ubiquitin-like protein 5. ubiquitin-like protein 5."]
["AT5G66530",null,175.33,-0.99923,0.16814,-5.9428,{"v":2.8e-09,"d":"2.80E-09"},{"v":4.62e-08,"d":"4.62E-08"},"Galactose mutarotase-like superfamily protein.","AT3G59580","NLP9",165.69,1.1737,0.18605,6.3087,{"v":2.81e-10,"d":"2.81E-10"},{"v":4.5e-09,"d":"4.50E-09"},"Plant regulator RWP-RK family protein.","AT4G29820","CFIM-25",309.22,1.1285,0.15811,7.1376,{"v":9.5e-13,"d":"9.50E-13"},{"v":1.47e-11,"d":"1.47E-11"},"full_name=homolog of CFIM-25. homolog of CFIM-25. Encodes a homolog of the protein CFI-25, a polyadenylation factor subunit.","AT5G14840",null,107.27,1.8931,0.22467,8.4262,3.57E-17,{"v":5.35e-16,"d":"5.35E-16"},"pseudogene. pseudogene of unknown protein","AT5G15970","KIN2",32.336,-6.3402,0.98466,-6.439,{"v":1.2E-10,"d":"1.20E-10"},{"v":1.76e-09,"d":"1.76E-09"},"stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6). Encodes a gene that can be induced by cold and abscisic acid and may be involved in cold acclimation and salt tolerance."]
["AT2G26440","PME12",218.9,-1.2411,0.21006,-5.9081,{"v":3.46E-9,"d":"3.46E-09"},{"v":5.67e-08,"d":"5.67E-08"},"Plant invertase/pectin methylesterase inhibitor superfamily.","AT1G68010","HPR",267.08,-1.0529,0.16741,-6.2893,{"v":3.19e-10,"d":"3.19E-10"},{"v":5.06e-09,"d":"5.06E-09"},"full_name=hydroxypyruvate reductase. hydroxypyruvate reductase. Encodes hydroxypyruvate reductase.","AT5G62800",null,933.16,-0.94483,0.13259,-7.126,{"v":1.03e-12,"d":"1.03E-12"},{"v":1.59e-11,"d":"1.59E-11"},"Protein with RING/U-box and TRAF-like domain.","AT2G37220",null,1026.1,0.89469,0.10642,8.4072,{"v":4.2e-17,"d":"4.20E-17"},6.25E-16,"RNA-binding (RRM/RBD/RNP motifs) family protein. Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT5G62700","TUB3",242.28,1.1202,0.17447,6.4209,1.35E-10,{"v":1.96e-09,"d":"1.96E-09"},"full_name=tubulin beta chain 3. tubulin beta chain 3. encodes tubulin beta-2/beta-3 chain"]
["AT2G38040","CAC3",3266.3,-0.61463,0.10424,-5.8961,{"v":3.72E-9,"d":"3.72E-09"},{"v":6.07e-08,"d":"6.07E-08"},"full_name=acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit. acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit. encodes the carboxyltransferase alpha subunit of acetyl-CoA carboxylase, involved in de novo fatty acid biosynthesis","AT1G11080","scpl31",297.57,1.0379,0.1653,6.2789,{"v":3.41e-10,"d":"3.41E-10"},{"v":5.39e-09,"d":"5.39E-09"},"full_name=serine carboxypeptidase-like 31. serine carboxypeptidase-like 31.","AT3G23400","FIB4",1211.1,-0.85944,0.12085,-7.1115,{"v":1.15e-12,"d":"1.15E-12"},{"v":1.76e-11,"d":"1.76E-11"},"full_name=fibrillin 4. Plastid-lipid associated protein PAP / fibrillin family protein. Encodes FIBRILLIN 4 (FIB4). The fibrillins are a large family of chloroplast proteins that have been linked with stress tolerance and disease resistance. FIBRILLIN 4 is required for plastoglobule development and stress resistance.","AT2G22620","RGIL6",88.612,-10.078,1.202,-8.3848,{"v":5.08e-17,"d":"5.08E-17"},{"v":7.52e-16,"d":"7.52E-16"},"Rhamnogalacturonate lyase family protein.","AT5G56980",null,64.129,1.8941,0.29552,6.4094,{"v":1.46e-10,"d":"1.46E-10"},{"v":2.11E-9,"d":"2.11E-09"},"cotton fiber protein."]
["AT5G57780","P1R1",20.774,-4.0044,0.68135,-5.8772,{"v":4.17e-09,"d":"4.17E-09"},{"v":6.77e-08,"d":"6.77E-08"},"full_name=P1R1. transcription factor. Encodes a atypical member of the bHLH (basic helix-loop-helix) family transcriptional factors.","AT1G73000","PYL3",129.67,1.3765,0.21965,6.2667,{"v":3.69e-10,"d":"3.69E-10"},{"v":5.79e-09,"d":"5.79E-09"},"full_name=PYR1-like 3. PYR1-like 3. Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.","AT1G71840",null,413.01,1.0702,0.15078,7.0981,{"v":1.26e-12,"d":"1.26E-12"},{"v":1.93e-11,"d":"1.93E-11"},"transducin family protein / WD-40 repeat family protein.","AT1G56200","EMB1303",323.84,1.2213,0.14592,8.3701,{"v":5.76e-17,"d":"5.76E-17"},{"v":8.48e-16,"d":"8.48E-16"},"full_name=embryo defective 1303. embryo defective 1303. Encodes a chloroplast localized protein that is essential for chloroplast development.","AT3G27930","OM47",517.49,0.7555,0.118,6.4025,{"v":1.53e-10,"d":"1.53E-10"},{"v":2.19e-09,"d":"2.19E-09"},"beta-galactosidase."]
["AT1G71250",null,90.27,-1.9166,0.3267,-5.8666,{"v":4.45e-09,"d":"4.45E-09"},{"v":7.19e-08,"d":"7.19E-08"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT5G23860","TUB8",62.596,-1.8199,0.29119,-6.25,{"v":4.1e-10,"d":"4.10E-10"},{"v":6.42e-09,"d":"6.42E-09"},"full_name=tubulin beta 8. tubulin beta 8. beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers.","AT5G51850","TRM24",44.05,-2.814,0.3976,-7.0774,1.47E-12,2.23E-11,"full_name=TON1 Recruiting Motif 24. hypothetical protein.","AT5G42820","U2AF35B",612.44,0.85489,0.10266,8.3275,{"v":8.25e-17,"d":"8.25E-17"},{"v":1.21e-15,"d":"1.21E-15"},"Zinc finger C-x8-C-x5-C-x3-H type family protein. U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.","AT1G74710","EDS16",632.88,-0.77022,0.12066,-6.3834,1.73E-10,{"v":2.47e-09,"d":"2.47E-09"},"full_name=ENHANCED DISEASE SUSCEPTIBILITY TO ERYSIPHE ORONTII 16. ADC synthase superfamily protein. Encodes a protein with isochorismate synthase activity. Mutants fail to accumulate salicylic acid. Its function may be redundant with that of ICS2 (AT1G18870)."]
["AT2G25770",null,863.93,0.67079,0.11468,5.8492,{"v":4.94e-09,"d":"4.94E-09"},{"v":7.94e-08,"d":"7.94E-08"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein.","AT4G02940","ALKBH10B",468.38,0.84391,0.1354,6.2328,{"v":4.58e-10,"d":"4.58E-10"},{"v":7.14e-09,"d":"7.14E-09"},"oxidoreductase, 2OG-Fe(II) oxygenase family protein.","AT3G51880","HMGB1",2675.1,1.1937,0.16905,7.061,1.65E-12,{"v":2.5e-11,"d":"2.50E-11"},"full_name=high mobility group B1. high mobility group B1. Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. In interphase cells, HMGB1 is found throughout the nucleus, whereas in mitotic cells it is not chromatin-associated.","AT2G44130","KMD3",40.293,-4.2105,0.50599,-8.3212,8.71E-17,{"v":1.27e-15,"d":"1.27E-15"},"Galactose oxidase/kelch repeat superfamily protein. Encodes a member of a family of F-box proteins, called the KISS ME DEADLY (KMD) family. Component of SCF ubiquitin protein ligase, interacts with phenylalanine ammonia-lyase.","AT3G47160",null,744.76,-0.58561,0.091884,-6.3733,{"v":1.85e-10,"d":"1.85E-10"},{"v":2.63e-09,"d":"2.63E-09"},"RING/U-box superfamily protein."]
["AT3G15352","COX17",132.68,1.2529,0.21429,5.8466,{"v":5.02e-09,"d":"5.02E-09"},{"v":8.05E-8,"d":"8.05E-08"},"full_name=cytochrome c oxidase 17. cytochrome c oxidase 17. Encodes protein similar to yeast COX17, a copper-binding protein that mediates the delivery of Cu to the mitochondria for the assembly of a functional cytochrome oxidase complex.","AT1G79270","ECT8",50.291,1.9263,0.30945,6.2251,{"v":4.81e-10,"d":"4.81E-10"},{"v":7.48e-09,"d":"7.48E-09"},"full_name=evolutionarily conserved C-terminal region 8. evolutionarily conserved C-terminal region 8.","AT5G06700","TBR",169.75,-1.2997,0.18412,-7.0591,{"v":1.68e-12,"d":"1.68E-12"},{"v":2.53e-11,"d":"2.53E-11"},"trichome birefringence-like protein (DUF828). Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). A tbr mutant is impaired in its ability to deposit secondary wall cellulose in specific cell types, most notably in trichomes.","AT5G61610",null,242.61,-1.655,0.19906,-8.3138,{"v":9.27e-17,"d":"9.27E-17"},1.35E-15,"Oleosin family protein.","AT5G21326","CIPK26",308.71,0.846,0.13278,6.3716,1.87E-10,{"v":2.66e-09,"d":"2.66E-09"},"full_name=calcineurin B-like protein (CBL)-interacting protein kinase 26. Ca2+regulated serine-threonine protein kinase family protein."]
["AT1G05190","emb2394",132.77,-1.1187,0.19183,-5.8317,{"v":5.49e-09,"d":"5.49E-09"},{"v":8.76e-08,"d":"8.76E-08"},"full_name=embryo defective 2394. Ribosomal protein L6 family.","AT5G57900","SKIP1",241.44,1.0584,0.17038,6.212,{"v":5.23e-10,"d":"5.23E-10"},{"v":8.1e-09,"d":"8.10E-09"},"full_name=SKP1 interacting partner 1. SKP1 interacting partner 1. F-box protein, interacts with SKP1/ASK1 subunit of SCF ubiquitin ligase in a glucose-dependent manner","AT3G58680","MBF1B",1516.7,0.90836,0.12904,7.0396,{"v":1.93e-12,"d":"1.93E-12"},{"v":2.89e-11,"d":"2.89E-11"},"full_name=multiprotein bridging factor 1B. multiprotein bridging factor 1B. One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated.","AT1G54570","PES1",339.29,-1.0557,0.12717,-8.3017,1.03E-16,1.49E-15,"full_name=phytyl ester synthase 1. Esterase/lipase/thioesterase family protein. Encodes a protein with phytyl ester synthesis and diacylglycerol acyltransferase activities that is involved in the deposition of free phytol and free fatty acids in the form of phytyl esters in chloroplasts, a process involved in maintaining the integrity of the photosynthetic membrane during abiotic stress and senescence.","AT2G45290","TKL2",5077.8,-0.39377,0.061877,-6.3637,{"v":1.97e-10,"d":"1.97E-10"},{"v":2.78e-09,"d":"2.78E-09"},"Transketolase."]
["AT4G25320","AHL3",195.19,-1.0366,0.17795,-5.8252,{"v":5.71e-09,"d":"5.71E-09"},{"v":9.08e-08,"d":"9.08E-08"},"AT hook motif DNA-binding family protein.","AT1G22610","MCTP6",303.22,0.85162,0.13724,6.2051,{"v":5.47e-10,"d":"5.47E-10"},{"v":8.42e-09,"d":"8.42E-09"},"C2 calcium/lipid-binding plant phosphoribosyltransferase family protein.","AT5G06390","FLA17",209.43,-1.1952,0.16996,-7.0326,2.03E-12,{"v":3.03e-11,"d":"3.03E-11"},"full_name=FASCICLIN-like arabinogalactan protein 17 precursor. FASCICLIN-like arabinogalactan protein 17 precursor.","AT4G14780",null,79.761,-2.3561,0.28426,-8.2885,1.15E-16,1.65E-15,"Protein kinase superfamily protein.","AT2G26110",null,215.24,-1.0642,0.1676,-6.3494,2.16E-10,{"v":3.04e-09,"d":"3.04E-09"},"bromodomain protein (DUF761)."]
["AT2G46270","GBF3",1152.4,0.58137,0.10018,5.8031,{"v":6.51e-09,"d":"6.51E-09"},{"v":1.03E-7,"d":"1.03E-07"},"full_name=G-box binding factor 3. G-box binding factor 3. encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3%C2%A1%C2%AFs DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2.","AT1G60220","ULP1D",413.85,-0.76295,0.12311,-6.1973,{"v":5.74e-10,"d":"5.74E-10"},{"v":8.8e-09,"d":"8.80E-09"},"full_name=UB-like protease 1D. UB-like protease 1D. Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner.","AT1G04410","c-NAD-MDH1",435.02,-1.2595,0.17949,-7.0169,{"v":2.27e-12,"d":"2.27E-12"},{"v":3.37e-11,"d":"3.37E-11"},"full_name=cytosolic-NAD-dependent malate dehydrogenase 1. Lactate/malate dehydrogenase family protein. predicted to encode a cytosolic malate dehydrogenase.","AT2G19520","FVE",1199,0.67354,0.0814,8.2745,1.29E-16,{"v":1.85e-15,"d":"1.85E-15"},"Transducin family protein / WD-40 repeat family protein. Controls flowering.","AT4G25630","FIB2",445.04,0.92054,0.14529,6.3358,{"v":2.36e-10,"d":"2.36E-10"},{"v":3.31e-09,"d":"3.31E-09"},"full_name=fibrillarin 2. fibrillarin 2. encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.2f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated."]
["AT1G20620","CAT3",1324.2,-0.77869,0.13449,-5.79,{"v":7.04e-09,"d":"7.04E-09"},{"v":1.11E-7,"d":"1.11E-07"},"full_name=catalase 3. catalase 3. Catalase, catalyzes the breakdown of hydrogen peroxide (H2O2) into water and oxygen.","AT5G47020",null,1183.8,-0.60839,0.098356,-6.1856,{"v":6.19e-10,"d":"6.19E-10"},{"v":9.44e-09,"d":"9.44E-09"},"MraZ.","AT1G03030",null,718.42,0.82973,0.11839,7.0086,2.41E-12,{"v":3.56e-11,"d":"3.56E-11"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT5G64840","ABCF5",1086.3,0.85487,0.10354,8.2566,{"v":1.5E-16,"d":"1.50E-16"},{"v":2.14e-15,"d":"2.14E-15"},"full_name=ATP-binding cassette F5. general control non-repressible 5. member of GCN subfamily","AT1G11340",null,24.363,7.883,1.2465,6.3244,2.54E-10,{"v":3.54e-09,"d":"3.54E-09"},"G-type lectin S-receptor-like Serine/Threonine-kinase."]
["AT4G20320","CTPS4",684.53,-1.1026,0.1912,-5.7668,{"v":8.08e-09,"d":"8.08E-09"},{"v":1.27e-07,"d":"1.27E-07"},"CTP synthase family protein.","AT2G38465",null,423.48,0.77622,0.12569,6.1755,{"v":6.6E-10,"d":"6.60E-10"},{"v":1E-8,"d":"1.00E-08"},"hypothetical protein.","AT5G03160","P58IPK",389.92,-0.99267,0.1419,-6.9958,{"v":2.64e-12,"d":"2.64E-12"},{"v":3.88e-11,"d":"3.88E-11"},"full_name=homolog of mamallian P58IPK. DnaJ P58IPK-like protein. J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast.","AT3G58780","SHP1",84.167,-2.601,0.31526,-8.2504,1.58E-16,{"v":2.25e-15,"d":"2.25E-15"},"full_name=SHATTERPROOF 1. K-box region and MADS-box transcription factor family protein. One of two genes (SHP1 and SHP2) that are required for fruit dehiscence. The two genes control dehiscence zone differentiation and promote the lignification of adjacent cells.","AT1G20225",null,319.1,-0.86091,0.13665,-6.2999,2.98E-10,{"v":4.13e-09,"d":"4.13E-09"},"Thioredoxin superfamily protein."]
["AT3G46600",null,24.584,-2.8746,0.4999,-5.7504,{"v":8.9e-09,"d":"8.90E-09"},{"v":1.39e-07,"d":"1.39E-07"},"GRAS family transcription factor.","AT4G00260","MEE45",41.891,-2.1871,0.35488,-6.1629,{"v":7.14e-10,"d":"7.14E-10"},{"v":1.08e-08,"d":"1.08E-08"},"full_name=maternal effect embryo arrest 45. Transcriptional factor B3 family protein.","AT3G21600",null,54.788,2.3123,0.33106,6.9846,{"v":2.86e-12,"d":"2.86E-12"},4.18E-11,"Senescence/dehydration-associated protein-like protein.","AT5G65380",null,876.5,-0.77469,0.094101,-8.2325,{"v":1.83e-16,"d":"1.83E-16"},{"v":2.6E-15,"d":"2.60E-15"},"MATE efflux family protein.","AT1G55110","IDD7",1047.4,0.60284,0.095888,6.2869,{"v":3.24e-10,"d":"3.24E-10"},{"v":4.47e-09,"d":"4.47E-09"},"full_name=indeterminate(ID)-domain 7. indeterminate(ID)-domain 7."]
["AT1G75690","LQY1",52.143,-1.8004,0.314,-5.7338,{"v":9.82e-09,"d":"9.82E-09"},{"v":1.52e-07,"d":"1.52E-07"},"full_name=LOW QUANTUM YIELD OF PHOTOSYSTEM II 1. DnaJ/Hsp40 cysteine-rich domain superfamily protein.","AT1G16490","MYB58",263.16,-1.1911,0.19342,-6.158,{"v":7.37e-10,"d":"7.37E-10"},{"v":1.11E-8,"d":"1.11E-08"},"full_name=myb domain protein 58. myb domain protein 58. Member of the R2R3 factor gene family.","AT4G18620","PYL13",157.61,1.3033,0.1872,6.9622,{"v":3.35e-12,"d":"3.35E-12"},{"v":4.88e-11,"d":"4.88E-11"},"full_name=PYR1-like 13. PYR1-like 13. Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.","AT5G16180","CRS1",164.23,1.5408,0.18747,8.2188,{"v":2.06e-16,"d":"2.06E-16"},{"v":2.9e-15,"d":"2.90E-15"},"full_name=ortholog of maize chloroplast splicing factor CRS1. maize chloroplast splicing factor-like protein.","AT4G17740",null,36.522,2.5988,0.41406,6.2763,{"v":3.47e-10,"d":"3.47E-10"},{"v":4.76e-09,"d":"4.76E-09"},"Peptidase S41 family protein."]
["AT3G24927",null,790.07,0.78634,0.1376,5.7148,{"v":1.1e-08,"d":"1.10E-08"},{"v":1.7e-07,"d":"1.70E-07"},"pseudogene. pseudogene of unknown protein","AT3G28860","ABCB19",196.14,-1.0755,0.17487,-6.1501,{"v":7.74e-10,"d":"7.74E-10"},{"v":1.16E-8,"d":"1.16E-08"},"full_name=ATP-binding cassette B19. ATP binding cassette subfamily B19. Encodes a member of the ATP-binding cassette (ABC) transporter family that is involved in auxin transport and is involved in postembryonic organ separation. Also known as AtMDR11 and PGP19. Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Acts upstream of phyA in regulating hypocotyl elongation and gravitropic response. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AtPGP1.","AT1G03760",null,180.8,1.2293,0.17694,6.948,{"v":3.7E-12,"d":"3.70E-12"},{"v":5.37e-11,"d":"5.37E-11"},"Prefoldin chaperone subunit family protein.","AT1G34340",null,67.307,-2.5398,0.30972,-8.2003,{"v":2.4E-16,"d":"2.40E-16"},{"v":3.36e-15,"d":"3.36E-15"},"alpha/beta-Hydrolases superfamily protein.","AT2G25490","EBF1",897.94,0.64363,0.10277,6.2626,{"v":3.79e-10,"d":"3.79E-10"},{"v":5.17e-09,"d":"5.17E-09"},"full_name=EIN3-binding F box protein 1. EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3."]
["AT5G35750","HK2",160.47,-0.9924,0.17413,-5.6991,{"v":1.2E-8,"d":"1.20E-08"},{"v":1.85E-7,"d":"1.85E-07"},"full_name=histidine kinase 2. histidine kinase 2. Encodes histidine kinase AHK2.","AT1G07770","RPS15A",870.47,-0.61689,0.10047,-6.1403,{"v":8.24e-10,"d":"8.24E-10"},{"v":1.23e-08,"d":"1.23E-08"},"full_name=ribosomal protein S15A. ribosomal protein S15A. Encodes cytoplasmic ribosomal protein S15a.","AT4G15530","PPDK",3155.7,0.81841,0.11806,6.9322,{"v":4.14e-12,"d":"4.14E-12"},{"v":5.98e-11,"d":"5.98E-11"},"full_name=pyruvate orthophosphate dikinase. pyruvate orthophosphate dikinase. The product of this long transcript was shown to be targeted to the chloroplast, whereas the shorter transcript (no targeting sequence) accumulates in the cytosol. They were also found in slightly different tissues.","AT2G20290","XIG",53.199,-3.015,0.36833,-8.1855,{"v":2.71e-16,"d":"2.71E-16"},{"v":3.79e-15,"d":"3.79E-15"},"full_name=myosin-like protein XIG. myosin-like protein XIG. member of Myosin-like proteins","AT5G58950",null,1102.6,0.49794,0.079807,6.2393,{"v":4.39e-10,"d":"4.39E-10"},{"v":5.98e-09,"d":"5.98E-09"},"Protein kinase superfamily protein."]
["AT4G38620","MYB4",157.61,-1.1549,0.20305,-5.6881,{"v":1.28E-8,"d":"1.28E-08"},{"v":1.97E-7,"d":"1.97E-07"},"full_name=myb domain protein 4. myb domain protein 4. Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2.","AT1G79990",null,400.38,-0.77354,0.12619,-6.1299,{"v":8.79e-10,"d":"8.79E-10"},{"v":1.3e-08,"d":"1.30E-08"},"coatomer subunit beta-2.","AT5G08240",null,50.401,2.5106,0.36263,6.9232,{"v":4.42e-12,"d":"4.42E-12"},6.35E-11,"transmembrane protein.","AT3G15990","SULTR3;4",41.995,-4.6332,0.56684,-8.1738,{"v":2.99e-16,"d":"2.99E-16"},{"v":4.16e-15,"d":"4.16E-15"},"full_name=sulfate transporter 3;4. sulfate transporter 3;4. Encodes sulfate transporter Sultr3;4.","AT1G35115",null,634.31,-0.71066,0.11422,-6.2216,{"v":4.92e-10,"d":"4.92E-10"},{"v":6.67e-09,"d":"6.67E-09"},"transposable_element_gene."]
["AT3G15540","IAA19",36.169,2.2603,0.39827,5.6753,{"v":1.38e-08,"d":"1.38E-08"},{"v":2.11E-7,"d":"2.11E-07"},"full_name=indole-3-acetic acid inducible 19. indole-3-acetic acid inducible 19. Primary auxin-responsive gene. Involved in the regulation stamen filaments development.","AT5G11770",null,961.08,0.59515,0.097391,6.1109,{"v":9.91e-10,"d":"9.91E-10"},{"v":1.46E-8,"d":"1.46E-08"},"NADH-ubiquinone oxidoreductase 20 kDa subunit.","AT4G26600","NOP2B",134.06,1.4655,0.21201,6.9125,{"v":4.76e-12,"d":"4.76E-12"},{"v":6.81e-11,"d":"6.81E-11"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT4G10270","WIP4",65.731,-2.6831,0.32893,-8.1572,3.43E-16,{"v":4.74e-15,"d":"4.74E-15"},"Wound-responsive family protein.","AT2G43410","FPA",643.26,0.62787,0.10109,6.2113,{"v":5.25e-10,"d":"5.25E-10"},{"v":7.08e-09,"d":"7.08E-09"},"RNA binding protein. FPA is a gene that regulates flowering time in Arabidopsis via a pathway that is independent of daylength (the autonomous pathway). Mutations in FPA result in extremely delayed flowering. Double mutants with FCA have reduced fertility and single/double mutants have defects in siRNA mediated chromatin silencing."]
["AT1G56210","ATHMP10",51.866,-1.7911,0.31598,-5.6684,{"v":1.44E-8,"d":"1.44E-08"},{"v":2.18e-07,"d":"2.18E-07"},"Heavy metal transport/detoxification superfamily protein.","AT4G31550","WRKY11",209.18,0.98745,0.16213,6.0904,{"v":1.13E-9,"d":"1.13E-09"},{"v":1.65e-08,"d":"1.65E-08"},"full_name=WRKY DNA-binding protein 11. WRKY DNA-binding protein 11. member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae.","AT5G10160",null,89.917,-1.6266,0.2362,-6.8865,{"v":5.72e-12,"d":"5.72E-12"},{"v":8.14e-11,"d":"8.14E-11"},"Thioesterase superfamily protein.","AT1G10670","ACLA-1",130.76,-1.7368,0.21344,-8.1373,{"v":4.04e-16,"d":"4.04E-16"},{"v":5.56e-15,"d":"5.56E-15"},"full_name=ATP-citrate lyase A-1. ATP-citrate lyase A-1. One of the three genes encoding subunit A of the trimeric protein ATP Citrate Lyase. Antisense ACLA-1 plants cause a reduction in cytosolic acetyl-CoA metabolism and have upregulation of stress-related genes and down-regulation of primary metabolism and growth genes, suggesting the mutation restricts normal growth and developmental processes and puts the plant into a state of stress.","AT3G50080","VFB2",400.41,0.73744,0.11891,6.2015,{"v":5.59e-10,"d":"5.59E-10"},{"v":7.5e-09,"d":"7.50E-09"},"full_name=VIER F-box proteine 2. VIER F-box protein 2. Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB1,3, and 4. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes."]
["AT1G78580","TPS1",1779.2,0.61294,0.10818,5.666,{"v":1.46E-8,"d":"1.46E-08"},{"v":2.21e-07,"d":"2.21E-07"},"full_name=trehalose-6-phosphate synthase. trehalose-6-phosphate synthase. Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division.","AT5G64750","ABR1",38.391,2.3528,0.38638,6.0893,{"v":1.13E-9,"d":"1.13E-09"},{"v":1.66E-8,"d":"1.66E-08"},"full_name=ABA REPRESSOR1. Integrase-type DNA-binding superfamily protein. Encodes a putative transcription factor containing an AP2 domain. Is a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. Expressed in response to ABA, osmotic stress, sugar stress and drought. Mutants are hypersensitive to these stresses. May be involved in regulation of ABA mediated stress response.","AT2G21270","UFD1",866.26,0.74584,0.10838,6.882,{"v":5.9e-12,"d":"5.90E-12"},{"v":8.4e-11,"d":"8.40E-11"},"full_name=ubiquitin fusion degradation 1. ubiquitin fusion degradation 1.","AT5G49350",null,73.581,-9.8126,1.2063,-8.1342,{"v":4.15e-16,"d":"4.15E-16"},{"v":5.7e-15,"d":"5.70E-15"},"Glycine-rich protein family.","AT3G26790","FUS3",323.77,-0.83825,0.13526,-6.1973,{"v":5.74e-10,"d":"5.74E-10"},{"v":7.7e-09,"d":"7.70E-09"},"full_name=FUSCA 3. AP2/B3-like transcriptional factor family protein. Transcriptional factor with high similarity to the B3 region of the VP1/ABI3-like proteins. Full length FUS3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of FUS3 requires the B3 DNA-binding domain and an activation domain. FUS3 specifies cotyledon identity. Regulator of gene expression during late embryogenesis. Involved in the control foliar organ identity in Arabidopsis by regulating the synthesis of two hormones, abscisic acid and gibberellin. FUS3 together with LEC1 positively regulate the abundance of the ABI3 protein in the seed."]
["AT1G16030","Hsp70b",162.08,0.97889,0.1732,5.6517,{"v":1.59E-8,"d":"1.59E-08"},{"v":2.4e-07,"d":"2.40E-07"},"full_name=heat shock protein 70B. heat shock protein 70B.","AT4G01320","ATSTE24",674.55,0.63645,0.10475,6.076,{"v":1.23e-09,"d":"1.23E-09"},{"v":1.8e-08,"d":"1.80E-08"},"Peptidase family M48 family protein. CAAX protease with broad substrate specificity. Localized exclusively to the endoplasmic reticulum.","AT3G23167","LCR39",38.278,-8.5382,1.2434,-6.8668,{"v":6.57e-12,"d":"6.57E-12"},{"v":9.3e-11,"d":"9.30E-11"},"full_name=low-molecular-weight cysteine-rich 39. low-molecular-weight cysteine-rich 39. Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.","AT3G19500",null,61.844,-3.2528,0.4011,-8.1098,{"v":5.07e-16,"d":"5.07E-16"},6.94E-15,"basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT3G10850","GLY2",753.13,-0.53793,0.087074,-6.1779,{"v":6.5e-10,"d":"6.50E-10"},{"v":8.67e-09,"d":"8.67E-09"},"Metallo-hydrolase/oxidoreductase superfamily protein. glyoxalase II cytoplasmic isozyme (Glx2-2) mRNA, complete"]
["AT2G38230","PDX1.1",82.185,-1.4556,0.25782,-5.6458,{"v":1.64e-08,"d":"1.64E-08"},{"v":2.47e-07,"d":"2.47E-07"},"full_name=pyridoxine biosynthesis 1.1. pyridoxine biosynthesis 1.1. Encodes a protein predicted to function in tandem with PDX2 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis.","AT3G58740","CSY1",308.66,-0.99621,0.16421,-6.0666,{"v":1.31E-9,"d":"1.31E-09"},{"v":1.9e-08,"d":"1.90E-08"},"full_name=citrate synthase 1. citrate synthase 1. Encodes a peroxisomal citrate synthase that is expressed in siliques and developing seeds.","AT1G63120","RBL2",877.41,0.76976,0.11247,6.8442,{"v":7.69e-12,"d":"7.69E-12"},1.08E-10,"full_name=RHOMBOID-like 2. RHOMBOID-like 2. AtRBL2 has been identified as a rhomboid protein involved in regulated intramembrane proteolysis (RIP). The enzyme has the proteolytic activity and substrate specificity comparable to the Drosophila Rho-1 protein.","AT1G56600","GolS2",3122.9,0.87277,0.10778,8.0977,{"v":5.6e-16,"d":"5.60E-16"},{"v":7.64e-15,"d":"7.64E-15"},"full_name=galactinol synthase 2. galactinol synthase 2. GolS2 is a galactinol synthase that catalyzes the formation of galactinol from UDP-galactose and myo-inositol. GolS2 transcript levels rise in response to methyl viologen, an oxidative damage-inducing agent. Plants over-expressing GolS2 have increased tolerance to salt, chilling, and high-light stress.","AT3G17465","RPL3P",324.59,0.87272,0.14158,6.1642,{"v":7.09e-10,"d":"7.09E-10"},{"v":9.42e-09,"d":"9.42E-09"},"full_name=ribosomal protein L3 plastid. ribosomal protein L3 plastid. encodes a putative L3 ribosomal protein targeted to the plastid."]
["AT1G60970",null,580.95,-0.63599,0.11298,-5.6294,{"v":1.81E-8,"d":"1.81E-08"},{"v":2.7e-07,"d":"2.70E-07"},"SNARE-like superfamily protein.","AT5G46640","AHL8",183.01,-1.07,0.17677,-6.053,{"v":1.42e-09,"d":"1.42E-09"},{"v":2.06e-08,"d":"2.06E-08"},"AT hook motif DNA-binding family protein.","AT3G22890","APS1",1888.5,1.0237,0.14984,6.8319,{"v":8.38e-12,"d":"8.38E-12"},{"v":1.18e-10,"d":"1.18E-10"},"full_name=ATP sulfurylase 1. ATP sulfurylase 1. encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis. It may also participate in selenium metabolism.","AT2G16586",null,220.12,1.5127,0.18716,8.0827,{"v":6.34e-16,"d":"6.34E-16"},{"v":8.59e-15,"d":"8.59E-15"},"transmembrane protein.","AT1G47550","SEC3A",1130.7,-0.52131,0.084634,-6.1596,{"v":7.29e-10,"d":"7.29E-10"},{"v":9.64e-09,"d":"9.64E-09"},"full_name=exocyst complex component sec3A. exocyst complex component sec3A. Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion."]
["AT4G13010","CEQORH",1884.5,0.55443,0.09856,5.6253,{"v":1.85E-8,"d":"1.85E-08"},{"v":2.76e-07,"d":"2.76E-07"},"Oxidoreductase, zinc-binding dehydrogenase family protein.","AT2G43680","IQD14",1060.9,-0.56366,0.093284,-6.0424,{"v":1.52e-09,"d":"1.52E-09"},{"v":2.19e-08,"d":"2.19E-08"},"full_name=IQ-domain 14. IQ-domain 14.","AT5G11160","APT5",86.82,-2.1369,0.31313,-6.8243,{"v":8.84e-12,"d":"8.84E-12"},{"v":1.23e-10,"d":"1.23E-10"},"full_name=adenine phosphoribosyltransferase 5. adenine phosphoribosyltransferase 5.","AT1G01240",null,1343.6,0.84183,0.10442,8.0623,{"v":7.49e-16,"d":"7.49E-16"},{"v":1.01e-14,"d":"1.01E-14"},"transmembrane protein.","AT4G10320",null,868.8,0.52871,0.085958,6.1508,{"v":7.71e-10,"d":"7.71E-10"},{"v":1.02E-8,"d":"1.02E-08"},"tRNA synthetase class I (I, L, M and V) family protein."]
["AT5G15180","PRX56",35.341,-2.1999,0.39236,-5.6069,{"v":2.06e-08,"d":"2.06E-08"},{"v":3.04e-07,"d":"3.04E-07"},"Peroxidase superfamily protein.","AT5G47110","LIL3:2",185.9,-0.99187,0.16469,-6.0228,{"v":1.71e-09,"d":"1.71E-09"},{"v":2.45e-08,"d":"2.45E-08"},"Chlorophyll A-B binding family protein.","AT3G57650","LPAT2",252.7,-1.1275,0.16539,-6.8172,{"v":9.28e-12,"d":"9.28E-12"},{"v":1.29e-10,"d":"1.29E-10"},"full_name=lysophosphatidyl acyltransferase 2. lysophosphatidyl acyltransferase 2. Encodes an endoplasmic reticulum localized protein with lysophosphatidyl acyltransferase activity.","AT3G61260","REM1.2",984.11,0.72949,0.090977,8.0185,1.07E-15,1.44E-14,"Remorin family protein.","AT3G52960","PRXIIE",975.3,0.54167,0.088355,6.1306,{"v":8.75e-10,"d":"8.75E-10"},{"v":1.14E-8,"d":"1.14E-08"},"Thioredoxin superfamily protein."]
["AT5G56530",null,307.37,-1.0365,0.18502,-5.6025,{"v":2.11E-8,"d":"2.11E-08"},{"v":3.11e-07,"d":"3.11E-07"},"tRNA-splicing ligase (DUF239).","AT1G79060",null,36.644,-2.261,0.37588,-6.0153,{"v":1.8E-9,"d":"1.80E-09"},{"v":2.56e-08,"d":"2.56E-08"},"TPRXL.","AT5G13200","GER5",75.333,1.7468,0.25631,6.8151,{"v":9.42e-12,"d":"9.42E-12"},{"v":1.3e-10,"d":"1.30E-10"},"GRAM domain family protein. Encodes a protein with unknown function that is involved in hormone mediated regulation of seed germination/dormancy.","AT1G31670",null,71.372,-9.7698,1.2211,-8.0005,1.24E-15,1.66E-14,"Copper amine oxidase family protein.","AT2G30070","KT1",41.191,-2.2643,0.36998,-6.12,{"v":9.36e-10,"d":"9.36E-10"},{"v":1.22E-8,"d":"1.22E-08"},"full_name=potassium transporter 1. potassium transporter 1. Encodes a high affinity potassium transporter."]
["AT4G30470",null,781.63,-0.66422,0.11874,-5.5938,{"v":2.22E-8,"d":"2.22E-08"},{"v":3.26e-07,"d":"3.26E-07"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT5G51570","HIR3",526.46,0.68521,0.11414,6.0033,{"v":1.93e-09,"d":"1.93E-09"},{"v":2.75e-08,"d":"2.75E-08"},"SPFH/Band 7/PHB domain-containing membrane-associated protein family.","AT3G18400","NAC058",37.235,-3.6466,0.53582,-6.8057,{"v":1.01e-11,"d":"1.01E-11"},{"v":1.39e-10,"d":"1.39E-10"},"full_name=NAC domain containing protein 58. NAC domain containing protein 58.","AT1G34060","TAR4",68.809,-9.7172,1.2164,-7.9883,1.37E-15,{"v":1.82e-14,"d":"1.82E-14"},"Pyridoxal phosphate (PLP)-dependent transferases superfamily protein.","AT5G08280","HEMC",408.6,0.68528,0.11235,6.0996,{"v":1.06e-09,"d":"1.06E-09"},{"v":1.38e-08,"d":"1.38E-08"},"full_name=hydroxymethylbilane synthase. hydroxymethylbilane synthase. Encodes a protein with porphobilinogen deaminase activity. This protein is targeted to the chloroplast. Mutants spontaneously develop chlorotic leaf lesions in the absence of pathogen attack, resembling the phenotype of lesion-mimic mutants."]
["AT2G36990","SIGF",40.097,-1.953,0.34979,-5.5833,{"v":2.36E-8,"d":"2.36E-08"},{"v":3.45e-07,"d":"3.45E-07"},"full_name=RNApolymerase sigma-subunit F. RNApolymerase sigma-subunit F. Encodes a general sigma factor in chloroplasts and is probably responsible for the recognition of sigma 70 type standard bacteria-type multi-subunit RNA polymerase (PEP) promoters in young cotyledons. It is a substrate for regulatory phosphorylation by cpCK2, a nuclear-coded plastid-targeted casein kinase 2, that has been implicated as a key component in plant sigma factor phosphorylation and transcriptional regulation.","AT4G39050","KIN7.4",176.84,-1.0916,0.18211,-5.994,{"v":2.05e-09,"d":"2.05E-09"},{"v":2.9e-08,"d":"2.90E-08"},"Kinesin motor family protein.","AT1G51680","4CL1",310.26,-1.0355,0.15235,-6.7971,{"v":1.07e-11,"d":"1.07E-11"},{"v":1.46e-10,"d":"1.46E-10"},"full_name=4-coumarate:CoA ligase 1. 4-coumarate:CoA ligase 1. encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. In addition to 4-coumarate, it also converts ferulate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, ferulic acid, caffeic acid and 5-OH-ferulic acid. At4CL1 was unable to use sinapic acid as substrate.","AT2G30620","H1.2",762.68,-1.1247,0.14096,-7.979,1.48E-15,1.96E-14,"winged-helix DNA-binding transcription factor family protein.","AT4G35790","PLDDELTA",1252.3,-0.46149,0.075959,-6.0756,{"v":1.24e-09,"d":"1.24E-09"},{"v":1.6e-08,"d":"1.60E-08"},"full_name=phospholipase D delta. phospholipase D delta. Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death."]
["AT5G19180","ECR1",342.53,0.93604,0.16827,5.5628,{"v":2.65e-08,"d":"2.65E-08"},{"v":3.86e-07,"d":"3.86E-07"},"full_name=E1 C-terminal related 1. E1 C-terminal related 1. Encodes a subunit of a RUB-activating enzyme analogous to the E1 ubiquitin-activating enzyme. ECR1 functions as a heterodimer with AXR1 to activate RUB, a ubiquitin-related protein.","AT1G02720","GATL5",111.42,-1.2518,0.20912,-5.9862,{"v":2.15e-09,"d":"2.15E-09"},{"v":3.03E-8,"d":"3.03E-08"},"full_name=galacturonosyltransferase 5. galacturonosyltransferase 5. Encodes a protein with putative galacturonosyltransferase activity.","AT2G28630","KCS12",45.543,-2.8546,0.42101,-6.7804,{"v":1.2e-11,"d":"1.20E-11"},1.64E-10,"full_name=3-ketoacyl-CoA synthase 12. 3-ketoacyl-CoA synthase 12. Encodes KCS12, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT5G65670","IAA9",994.82,-0.85402,0.10724,-7.9633,{"v":1.68e-15,"d":"1.68E-15"},{"v":2.21e-14,"d":"2.21E-14"},"full_name=indole-3-acetic acid inducible 9. indole-3-acetic acid inducible 9. auxin (indole-3-acetic acid) induced gene","AT2G33700","PP2CG1",309.03,0.78738,0.12988,6.0624,{"v":1.34e-09,"d":"1.34E-09"},{"v":1.73e-08,"d":"1.73E-08"},"full_name=protein phosphatase 2C G Group 1. Protein phosphatase 2C family protein. Encodes a putative protein phosphatase 2C that positively regulates salt tolerance in abscisic acid-dependent manner."]
["AT5G61410","RPE",1512.1,-0.49993,0.090117,-5.5475,{"v":2.9e-08,"d":"2.90E-08"},{"v":4.2E-7,"d":"4.20E-07"},"full_name=D-ribulose-5-phosphate-3-epimerase. D-ribulose-5-phosphate-3-epimerase. Arabidopsis thaliana ribulose-5-phosphate-3-epimerase mRNA","AT3G12670","emb2742",7081.9,-0.54855,0.091954,-5.9656,{"v":2.44e-09,"d":"2.44E-09"},{"v":3.42e-08,"d":"3.42E-08"},"full_name=embryo defective 2742. CTP synthase family protein.","AT1G05280",null,219.95,-1.2194,0.18014,-6.7693,1.29E-11,{"v":1.76e-10,"d":"1.76E-10"},"ERV-F (C)1 provirus ancestral Env polyprotein, putative (DUF604).","AT3G08030","ATHA2-1",280.05,-1.5525,0.1953,-7.9491,{"v":1.88e-15,"d":"1.88E-15"},{"v":2.47e-14,"d":"2.47E-14"},"DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642). The mRNA of this gene is expressed in viable seeds. Its detection in a dry seed lot has potential for use as a molecular marker for germination performance as absence of expression correlates with decreased germination.","AT3G04460","PEX12",187.86,1.0206,0.16864,6.0521,{"v":1.43E-9,"d":"1.43E-09"},{"v":1.83e-08,"d":"1.83E-08"},"full_name=peroxin-12. peroxin-12. RING finger protein involved in peroxisome biogenesis. Also involved in peroxisomal import of nitric oxide synthase. Has been demonstrated to have E3 ubiquitin ligase activity."]
["AT3G51740","IMK2",19.378,-5.1986,0.93775,-5.5437,{"v":2.96E-8,"d":"2.96E-08"},{"v":4.28e-07,"d":"4.28E-07"},"full_name=inflorescence meristem receptor-like kinase 2. inflorescence meristem receptor-like kinase 2. encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors.","AT1G19920","APS2",179.9,-1.1406,0.19148,-5.9568,{"v":2.57E-9,"d":"2.57E-09"},{"v":3.6e-08,"d":"3.60E-08"},"Pseudouridine synthase/archaeosine transglycosylase-like family protein. encodes a chloroplast form of ATP sulfurylase.","AT5G45690",null,38633,0.76526,0.11307,6.7678,1.31E-11,{"v":1.77e-10,"d":"1.77E-10"},"histone acetyltransferase (DUF1264).","AT1G20730",null,65.653,-7.1795,0.90471,-7.9358,2.09E-15,{"v":2.74e-14,"d":"2.74E-14"},"transport/golgi organization-like protein, putative (DUF833).","AT5G21090",null,953.59,-0.49682,0.082201,-6.0439,{"v":1.5E-9,"d":"1.50E-09"},{"v":1.92E-8,"d":"1.92E-08"},"Leucine-rich repeat (LRR) family protein."]
["AT4G27260","WES1",141.01,1.0446,0.18897,5.5278,{"v":3.24e-08,"d":"3.24E-08"},{"v":4.65e-07,"d":"4.65E-07"},"Auxin-responsive GH3 family protein. encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin. It is involved in camalexin biosynthesis via conjugating indole-3-carboxylic acid (ICA) and cysteine (Cys).","AT1G24180","IAR4",280.69,0.82827,0.13936,5.9433,{"v":2.79e-09,"d":"2.79E-09"},{"v":3.88e-08,"d":"3.88E-08"},"full_name=IAA-CONJUGATE-RESISTANT 4. Thiamin diphosphate-binding fold (THDP-binding) superfamily protein. Arabidopsis thaliana pyruvate dehydrogenase E1a-like subunit. 81% identical to a previously characterized Arabidopsis mitochondrial PDH E1a-subunit, At1g59900. Serine 296 phosphorylation of IAR4 has critical function in root hair formation and root development. Changing Ser296 in IAR4 to Ala resulted in a phenotype intermediate between mutant and wild-type, while substitution to Asp was either lethal or caused an extreme dwarf phenotype.","AT1G80080","TMM",45.23,-2.4939,0.36943,-6.7506,{"v":1.47e-11,"d":"1.47E-11"},{"v":1.98e-10,"d":"1.98E-10"},"full_name=TOO MANY MOUTHS. Leucine-rich repeat (LRR) family protein. Encodes a transmembrane leucine-repeat containing receptor-like protein that is expressed in proliferative postprotodermal cells. Recessive mutation leads to disruption of asymmetric cell division during stomata development. Its transcript levels change after inducing MUTE expression in a mute background.","AT1G32740",null,44.777,-2.8916,0.3653,-7.9157,{"v":2.46e-15,"d":"2.46E-15"},{"v":3.2e-14,"d":"3.20E-14"},"SBP (S-ribonuclease binding protein) family protein.","AT5G58470","TAF15b",699.69,0.59659,0.098997,6.0264,{"v":1.68E-9,"d":"1.68E-09"},{"v":2.13e-08,"d":"2.13E-08"},"full_name=TBP-associated factor 15B. TBP-associated factor 15B."]
["AT3G43810","CAM7",305.89,-0.87885,0.15903,-5.5262,{"v":3.27e-08,"d":"3.27E-08"},{"v":4.69e-07,"d":"4.69E-07"},"full_name=calmodulin 7. calmodulin 7. EF hand domain protein encodes a calmodulin. Can functionally complement a yeast CaM mutant.","AT3G51420","SSL4",27.939,-2.839,0.47769,-5.9432,{"v":2.79e-09,"d":"2.79E-09"},{"v":3.88e-08,"d":"3.88E-08"},"full_name=strictosidine synthase-like 4. strictosidine synthase-like 4. Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.","AT1G04220","KCS2",392.81,-1.1701,0.17352,-6.7432,{"v":1.55e-11,"d":"1.55E-11"},2.09E-10,"full_name=3-ketoacyl-CoA synthase 2. 3-ketoacyl-CoA synthase 2. Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT5G24380","YSL2",297.5,-1.73,0.21855,-7.9156,{"v":2.46e-15,"d":"2.46E-15"},{"v":3.2e-14,"d":"3.20E-14"},"full_name=YELLOW STRIPE like 2. YELLOW STRIPE like 2. closest Arabidopsis homolog of Zea maize metal-phytosiderophore/metal-nicotianamine transporter ZmYS1","AT5G03990",null,364.32,0.76259,0.12658,6.0246,{"v":1.7e-09,"d":"1.70E-09"},{"v":2.15e-08,"d":"2.15E-08"},"FK506-binding-like protein."]
["AT5G37680","ARLA1A",192.24,0.9023,0.1637,5.5118,{"v":3.55E-8,"d":"3.55E-08"},{"v":5.07e-07,"d":"5.07E-07"},"full_name=ADP-ribosylation factor-like A1A. ADP-ribosylation factor-like A1A. A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARL GTPases.","AT1G09010",null,455.74,-0.71045,0.11967,-5.937,{"v":2.9e-09,"d":"2.90E-09"},{"v":4.02e-08,"d":"4.02E-08"},"glycoside hydrolase family 2 protein.","AT1G32700",null,866.76,-1.0267,0.15244,-6.7353,1.64E-11,{"v":2.19e-10,"d":"2.19E-10"},"PLATZ transcription factor family protein.","AT2G38480","CASPL4B1",45.406,-3.9121,0.49492,-7.9044,{"v":2.69e-15,"d":"2.69E-15"},{"v":3.49e-14,"d":"3.49E-14"},"Uncharacterized protein family (UPF0497).","AT1G78080","RAP2.4",255.04,-1.02,0.16965,-6.0122,{"v":1.83e-09,"d":"1.83E-09"},{"v":2.31e-08,"d":"2.31E-08"},"full_name=related to AP2 4. related to AP2 4. Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. Role in mediating light and ethylene signaling."]
["AT5G58300",null,73.964,-1.5168,0.27546,-5.5065,{"v":3.66e-08,"d":"3.66E-08"},{"v":5.21e-07,"d":"5.21E-07"},"Leucine-rich repeat protein kinase family protein.","AT2G37360","ABCG2",249.63,0.89676,0.15128,5.9278,{"v":3.07e-09,"d":"3.07E-09"},{"v":4.23e-08,"d":"4.23E-08"},"full_name=ATP-binding cassette G2. ABC-2 type transporter family protein. Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16).","AT1G05230","HDG2",110.59,-1.8293,0.27183,-6.7295,{"v":1.7e-11,"d":"1.70E-11"},{"v":2.27e-10,"d":"2.27E-10"},"full_name=homeodomain GLABROUS 2. homeodomain GLABROUS 2. Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. Mutants have trichomes that appear glass-like under a dissecting microscope as compared to the wild-type trichomes. The mutations do not affect trichome growth or branch number.","AT4G20460",null,49.075,-3.4303,0.4345,-7.8947,2.91E-15,{"v":3.76e-14,"d":"3.76E-14"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT1G06730",null,89.334,1.406,0.23439,5.9986,{"v":1.99E-9,"d":"1.99E-09"},{"v":2.5e-08,"d":"2.50E-08"},"pfkB-like carbohydrate kinase family protein."]
["AT2G41560","ACA4",57.069,-1.6271,0.29619,-5.4933,{"v":3.95e-08,"d":"3.95E-08"},{"v":5.58e-07,"d":"5.58E-07"},"full_name=autoinhibited Ca(2+)-ATPase, isoform 4. autoinhibited Ca(2+)-ATPase, isoform 4. Encodes a calmodulin-regulated Ca(2+)-ATPase that improves salt tolerance in yeast. Localized to the vacuole. Lesion mimic phenotype when mutation in the gene is combined with a mutation in ACA11. Lesion mimic phenotype of double knockout can be suppressed by nutritional supplements that increase anion levels (e.g. 15 mM Nitrate, Chloride, or Phosphate).","AT3G29770","MES11",134.68,-1.1329,0.19155,-5.914,{"v":3.34E-9,"d":"3.34E-09"},{"v":4.58E-8,"d":"4.58E-08"},"full_name=methyl esterase 11. methyl esterase 11. Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.","AT3G53480","ABCG37",135.02,-2.3297,0.34688,-6.7162,{"v":1.87e-11,"d":"1.87E-11"},{"v":2.48e-10,"d":"2.48E-10"},"full_name=ATP-binding cassette G37. pleiotropic drug resistance 9. Negative regulator of auxin polar transport inhibitors. ABCG37 regulates auxin distribution and homeostasis in roots by excluding IBA from the root apex, but does not act directly in basipetal transport. ABCG37 and ABCG36 act redundantly at outermost root plasma membranes and, transport IBA out of the cells. Also involved in root transmembrane secretion of fluorescent phenolics involved in Fe uptake.","AT1G14200","SNIPER1",578.72,1.4936,0.18969,7.8738,{"v":3.44e-15,"d":"3.44E-15"},{"v":4.42e-14,"d":"4.42E-14"},"RING/U-box superfamily protein.","AT5G65640","bHLH093",70.802,-1.6753,0.27973,-5.9891,{"v":2.11E-9,"d":"2.11E-09"},{"v":2.64e-08,"d":"2.64E-08"},"full_name=beta HLH protein 93. beta HLH protein 93."]
["AT5G57350","HA3",401.87,0.70902,0.12942,5.4783,{"v":4.29E-8,"d":"4.29E-08"},{"v":6.04e-07,"d":"6.04E-07"},"full_name=H(+)-ATPase 3. H[+]-ATPase 3. member of Plasma membrane H+-ATPase family","AT5G49900",null,445.4,0.86298,0.14614,5.9054,{"v":3.52e-09,"d":"3.52E-09"},{"v":4.79e-08,"d":"4.79E-08"},"Beta-glucosidase, GBA2 type family protein.","AT3G25230","ROF1",1119.6,0.79546,0.11865,6.7042,{"v":2.02e-11,"d":"2.02E-11"},{"v":2.68e-10,"d":"2.68E-10"},"full_name=rotamase FKBP 1. rotamase FKBP 1. Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","AT3G09440",null,367.9,-1.721,0.21912,-7.8539,{"v":4.03e-15,"d":"4.03E-15"},{"v":5.16e-14,"d":"5.16E-14"},"Heat shock protein 70 (Hsp 70) family protein.","AT5G20600",null,240.71,1.0138,0.16963,5.9765,{"v":2.28E-9,"d":"2.28E-09"},{"v":2.84E-8,"d":"2.84E-08"},"ribosomal RNA processing-like protein."]
["AT5G21482","CKX7",31.528,-2.415,0.44111,-5.4747,{"v":4.38e-08,"d":"4.38E-08"},{"v":6.14e-07,"d":"6.14E-07"},"full_name=cytokinin oxidase 7. cytokinin oxidase 7. This gene used to be called AtCKX5. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.","AT5G49350",null,74.587,1.5897,0.26931,5.9027,{"v":3.58E-9,"d":"3.58E-09"},{"v":4.86e-08,"d":"4.86E-08"},"Glycine-rich protein family.","AT3G57880","MCTP3",729.09,0.75035,0.11199,6.7004,{"v":2.08e-11,"d":"2.08E-11"},{"v":2.74e-10,"d":"2.74E-10"},"Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein.","AT2G36310","URH1",39.884,-3.6995,0.47215,-7.8354,{"v":4.67e-15,"d":"4.67E-15"},{"v":5.95e-14,"d":"5.95E-14"},"full_name=uridine-ribohydrolase 1. uridine-ribohydrolase 1. Encodes a cytoplasmic nucleoside hydrolase. It has the highest levels of activity with uridine followed by xanthosine. It shows little activity with inosine and none with cytidine. Mutant analyses indicate that it plays a role in purine and pyrimidine catabolism.","AT5G20720","CPN20",1683,-0.50767,0.085117,-5.9643,{"v":2.46e-09,"d":"2.46E-09"},{"v":3.05e-08,"d":"3.05E-08"},"full_name=chaperonin 20. chaperonin 20. Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES."]
["AT5G52100","CRR1",19.229,-5.1924,0.95131,-5.4582,{"v":4.81e-08,"d":"4.81E-08"},{"v":6.72e-07,"d":"6.72E-07"},"full_name=chlororespiration reduction 1. Dihydrodipicolinate reductase, bacterial/plant. Is essential for chloroplast NAD(P)H dehydrogenase activity, which is involved in electron transfer between PSII and PSI. Likely functions in biogenesis or stabilization of the NAD(P)H dehydrogenase complex.","AT3G17640",null,28.056,-2.865,0.48594,-5.8957,{"v":3.73e-09,"d":"3.73E-09"},{"v":5.05e-08,"d":"5.05E-08"},"Leucine-rich repeat (LRR) family protein.","AT1G53690",null,67.789,-2.1548,0.32192,-6.6936,{"v":2.18e-11,"d":"2.18E-11"},{"v":2.86e-10,"d":"2.86E-10"},"DNA directed RNA polymerase, 7 kDa subunit. Protein of unknown function that is homologous to At5g41010, which encodes a non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB12.","AT3G30390",null,590.65,-1.0829,0.13855,-7.816,{"v":5.45e-15,"d":"5.45E-15"},{"v":6.91e-14,"d":"6.91E-14"},"Transmembrane amino acid transporter family protein. Encodes a putative amino acid transporter.","AT5G11430",null,222.69,1.0125,0.16996,5.9573,{"v":2.56e-09,"d":"2.56E-09"},{"v":3.17e-08,"d":"3.17E-08"},"SPOC domain / Transcription elongation factor S-II protein."]
["AT5G45870","PYL12",17.141,3.8292,0.70388,5.4401,{"v":5.33e-08,"d":"5.33E-08"},{"v":7.41e-07,"d":"7.41E-07"},"full_name=PYR1-like 12. PYR1-like 12. Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.","AT2G45960","PIP1B",944.44,0.81591,0.13871,5.8823,{"v":4.05e-09,"d":"4.05E-09"},{"v":5.45e-08,"d":"5.45E-08"},"full_name=plasma membrane intrinsic protein 1B. plasma membrane intrinsic protein 1B. a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development.","AT5G36160","TAT2",478.58,-0.92798,0.13882,-6.6849,2.31E-11,{"v":3.02e-10,"d":"3.02E-10"},"Tyrosine transaminase family protein. Encodes an L-tyrosine aminotransferase.","AT4G23470",null,111.58,-1.6773,0.21503,-7.8001,{"v":6.18e-15,"d":"6.18E-15"},{"v":7.81e-14,"d":"7.81E-14"},"PLAC8 family protein.","AT4G15910","DI21",225.93,1.0474,0.17619,5.9448,{"v":2.77e-09,"d":"2.77E-09"},{"v":3.41e-08,"d":"3.41E-08"},"full_name=drought-induced 21. drought-induced 21. encodes a gene whose transcript level in root and leaves increases to progressive drought stress. The transcript level is also affected by changes of endogenous or exogenous abscisic acid level. It appears to be a member of plant-specific gene family that includes late embryo-abundant and zinc- IAA-induced proteins in other plants."]
["AT5G43630","TZP",130.87,1.1023,0.20289,5.4333,{"v":5.53e-08,"d":"5.53E-08"},{"v":7.66e-07,"d":"7.66E-07"},"zinc knuckle (CCHC-type) family protein. Encodes a zinc knuckle protein that negatively regulates morning specific growth. The role of TZP in hypocotyl elongation was established through a QTL analysis of BayXSha RIL populations. The Bay-0 allele contains a deletion causing a frameshift mutation. TZP is under circadian control and acts to regulate morning-specific hypocotyl growth.","AT3G58975",null,48.105,-1.8755,0.31981,-5.8643,{"v":4.51e-09,"d":"4.51E-09"},{"v":6.05e-08,"d":"6.05E-08"},"pseudogene. pseudogene of F-box family protein","AT3G03170",null,222.53,1.2583,0.18832,6.682,{"v":2.36e-11,"d":"2.36E-11"},{"v":3.07e-10,"d":"3.07E-10"},"hypothetical protein.","AT3G19720","ARC5",242.61,1.1704,0.15019,7.7928,{"v":6.55e-15,"d":"6.55E-15"},{"v":8.24e-14,"d":"8.24E-14"},"full_name=ACCUMULATION AND REPLICATION OF CHLOROPLAST 5. P-loop containing nucleoside triphosphate hydrolases superfamily protein. Encodes a novel chloroplast division protein. Mutants of exhibit defects in chloroplast constriction, have enlarged, dumbbell-shaped chloroplasts. The ARC5 gene product shares similarity with the dynamin family of GTPases, which mediate endocytosis, mitochondrial division, and other organellar fission and fusion events in eukaryotes. Phylogenetic analysis showed that ARC5 is related to a group of dynamin-like proteins unique to plants. A GFP-ARC5 fusion protein localizes to a ring at the chloroplast division site. Chloroplast import and protease protection assays indicate that the ARC5 ring is positioned on the outer surface of the chloroplast. Facilitates separation of the two daughter chloroplasts.","AT5G13400",null,18.684,7.5142,1.2661,5.9349,{"v":2.94e-09,"d":"2.94E-09"},{"v":3.6e-08,"d":"3.60E-08"},"Major facilitator superfamily protein."]
["AT3G22370","AOX1A",35.789,2.1872,0.4033,5.4232,{"v":5.86e-08,"d":"5.86E-08"},{"v":8.08e-07,"d":"8.08E-07"},"full_name=alternative oxidase 1A. alternative oxidase 1A. Encodes AOX1a, an isoform of alternative oxidase that is expressed in rosettes, flowers, and root. The alternative oxidase of plant mitochondria transfers electrons from the ubiquinone pool to oxygen without energy conservations. It is regulated through transcriptional control and by pyruvate. Plays a role in shoot acclimation to low temperature. Also is capable of ameliorating reactive oxygen species production when the cytochrome pathway is inhibited. AOX1a also functions as a marker for mitochondrial retrograde response.","AT4G17550","G3Pp4",683.45,0.63853,0.10896,5.8599,{"v":4.63e-09,"d":"4.63E-09"},{"v":6.19e-08,"d":"6.19E-08"},"full_name=glycerol-3-phosphate permease 4. Major facilitator superfamily protein. Encodes a member of the phosphate starvation-induced glycerol-3-phosphate permease gene family: AT3G47420(G3Pp1), AT4G25220(G3Pp2), AT1G30560(G3Pp3), AT4G17550(G3Pp4) and AT2G13100(G3Pp5).","AT2G47250",null,419.8,0.89523,0.13415,6.6734,{"v":2.5e-11,"d":"2.50E-11"},{"v":3.24e-10,"d":"3.24E-10"},"RNA helicase family protein.","AT3G15340","PPI2",44.554,-3.1886,0.4096,-7.7847,{"v":6.99e-15,"d":"6.99E-15"},{"v":8.75e-14,"d":"8.75E-14"},"full_name=proton pump interactor 2. proton pump interactor 2. Encodes PPI2 (proton pump interactor 2), a homologue of PPI1, a protein that interacts with the plasma membrane H+ ATPase AHA1.","AT1G17210","ILP1",846.57,0.52325,0.088217,5.9314,{"v":3E-9,"d":"3.00E-09"},{"v":3.67e-08,"d":"3.67E-08"},"full_name=IAP-like protein 1. IAP-like protein 1."]
["AT5G08360",null,690.25,0.57158,0.1057,5.4075,{"v":6.39e-08,"d":"6.39E-08"},{"v":8.77e-07,"d":"8.77E-07"},"Stu1, putative (DUF789).","AT4G35290","GLUR2",51.553,-1.8256,0.31313,-5.8302,{"v":5.54e-09,"d":"5.54E-09"},{"v":7.36e-08,"d":"7.36E-08"},"full_name=glutamate receptor 2. glutamate receptor 2. Encodes a putative glutamate receptor like-protein, member of Putative ligand-gated ion channel subunit family","AT3G51440",null,115.4,1.3614,0.20447,6.6583,{"v":2.77e-11,"d":"2.77E-11"},{"v":3.57e-10,"d":"3.57E-10"},"Calcium-dependent phosphotriesterase superfamily protein.","AT4G35160","ASMT",3631.2,-0.80916,0.10433,-7.7561,{"v":8.76e-15,"d":"8.76E-15"},1.09E-13,"O-methyltransferase family protein.","AT3G50500","SNRK2.2",775.46,0.52545,0.088766,5.9195,{"v":3.23e-09,"d":"3.23E-09"},{"v":3.92E-8,"d":"3.92E-08"},"full_name=SNF1-related protein kinase 2.2. SNF1-related protein kinase 2.2. encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Enzyme involved in the ABA signaling during seed germination, dormancy and seedling growth."]
["AT1G08500","ENODL18",42.911,1.8154,0.33679,5.3902,{"v":7.04e-08,"d":"7.04E-08"},{"v":9.62e-07,"d":"9.62E-07"},"full_name=early nodulin-like protein 18. early nodulin-like protein 18.","AT1G56045",null,523.98,-0.88365,0.15175,-5.8232,{"v":5.77e-09,"d":"5.77E-09"},{"v":7.64e-08,"d":"7.64E-08"},"Ribosomal protein L41 family.","AT2G16660",null,517.69,-1.1173,0.16789,-6.6554,2.82E-11,{"v":3.63e-10,"d":"3.63E-10"},"Major facilitator superfamily protein.","AT5G45150","RTL3",55.695,2.4786,0.32056,7.7322,1.06E-14,1.31E-13,"full_name=RNAse THREE-like protein 3. RNAse THREE-like protein 3.","AT5G19485",null,382.84,0.76416,0.1292,5.9148,{"v":3.32e-09,"d":"3.32E-09"},{"v":4.02e-08,"d":"4.02E-08"},"transferases/nucleotidyltransferase."]
["AT1G60680",null,94.981,1.1662,0.21684,5.3781,{"v":7.53e-08,"d":"7.53E-08"},{"v":1.03e-06,"d":"1.03E-06"},"NAD(P)-linked oxidoreductase superfamily protein.","AT1G75830","LCR67",133.93,1.6597,0.28532,5.8168,{"v":6E-9,"d":"6.00E-09"},{"v":7.91E-8,"d":"7.91E-08"},"full_name=low-molecular-weight cysteine-rich 67. low-molecular-weight cysteine-rich 67. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","AT1G76680","OPR1",112.43,1.7438,0.26234,6.6469,{"v":2.99e-11,"d":"2.99E-11"},{"v":3.83e-10,"d":"3.83E-10"},"full_name=12-oxophytodienoate reductase 1. 12-oxophytodienoate reductase 1. Encodes a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. Predicted to be a cytosolic protein.","AT5G40720",null,87.256,1.8837,0.24418,7.7145,1.21E-14,{"v":1.5e-13,"d":"1.50E-13"},"C3H4 type zinc finger protein (DUF23).","AT1G36060","TG",806.24,-0.66189,0.11204,-5.9075,{"v":3.47e-09,"d":"3.47E-09"},{"v":4.19e-08,"d":"4.19E-08"},"Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.Overexpression results in increased drought tolerance and vitrified leaves. Binds to DRE/GCC promoter elements and activates expression of aquaporin genes AtTIP1;1, AtTIP2;3, and AtPIP2;2."]
["AT1G27100",null,281.93,-0.83233,0.15481,-5.3765,{"v":7.59e-08,"d":"7.59E-08"},{"v":1.03e-06,"d":"1.03E-06"},"Actin cross-linking protein.","AT4G01460",null,145,-1.1763,0.20223,-5.8166,{"v":6.01e-09,"d":"6.01E-09"},{"v":7.92e-08,"d":"7.92E-08"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT1G07910","RNL",247.93,1.0464,0.15746,6.6452,{"v":3.03e-11,"d":"3.03E-11"},{"v":3.87e-10,"d":"3.87E-10"},"full_name=RNAligase. RNAligase. Encodes a tRNA ligase that resembles the yeast Trl1 RNA ligase in structure and function but very different in sequence. Like Trl1, AtRNL consists of two domains %E2%80%94 an N-terminal ligase component and a C-terminal 5'-kinase/2',3'-cyclic phosphodiesterase (CPD) component%E2%80%94 that can function in tRNA splicing in vivo when expressed as separate polypeptides. Requires a 2'-PO4 end for tRNA splicing in vivo.","AT2G30490","C4H",441.61,-1.0582,0.13725,-7.7103,1.26E-14,1.55E-13,"full_name=cinnamate-4-hydroxylase. cinnamate-4-hydroxylase. Encodes a cinnamate-4-hydroxylase. Mutations in this gene impact phenylpropanoid metabolism, growth and development.","AT3G22530",null,306.94,0.80678,0.1366,5.9059,{"v":3.51e-09,"d":"3.51E-09"},{"v":4.22e-08,"d":"4.22E-08"},"heat shock protein."]
["AT3G51540","BPP7",17.433,-3.5233,0.65595,-5.3712,{"v":7.82e-08,"d":"7.82E-08"},{"v":1.06E-6,"d":"1.06E-06"},"mucin-5AC-like protein.","AT3G17680",null,21.975,-3.2591,0.56072,-5.8123,{"v":6.16e-09,"d":"6.16E-09"},{"v":8.09e-08,"d":"8.09E-08"},"Kinase interacting (KIP1-like) family protein.","AT2G29460","GSTU4",618.85,1.1468,0.17293,6.6313,{"v":3.33e-11,"d":"3.33E-11"},{"v":4.24e-10,"d":"4.24E-10"},"full_name=glutathione S-transferase tau 4. glutathione S-transferase tau 4. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","AT5G58370","ENGB-3",62.589,2.2958,0.29807,7.7021,1.34E-14,1.65E-13,"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT2G04040","DTX1",766.29,0.61565,0.10439,5.8973,{"v":3.69e-09,"d":"3.69E-09"},{"v":4.43E-8,"d":"4.43E-08"},"full_name=detoxification 1. MATE efflux family protein. AtDTX1 (At2g04040) has been identified as a detoxifying efflux carrier for plant-derived antibiotics and other toxic compounds, including CD2+. Mistakenly referred to as At2g04070 in PMID:11739388."]
["AT4G02940","ALKBH10B",270.65,1.0388,0.19362,5.3649,{"v":8.1e-08,"d":"8.10E-08"},{"v":1.09e-06,"d":"1.09E-06"},"oxidoreductase, 2OG-Fe(II) oxygenase family protein.","AT5G55070",null,643.57,0.60957,0.10499,5.806,{"v":6.4e-09,"d":"6.40E-09"},{"v":8.37e-08,"d":"8.37E-08"},"Dihydrolipoamide succinyltransferase.","AT3G52180","SEX4",184.29,-1.603,0.24201,-6.6235,3.51E-11,{"v":4.45e-10,"d":"4.45E-10"},"full_name=STARCH-EXCESS 4. dual specificity protein phosphatase (DsPTP1) family protein. Encodes a plant-specific glucan phosphatase that contains a noncatalytic carbohydrate-binding module as well as a dual specificity protein phosphatase domain. SEX4 can dephosphorylate C6- and C3-glucosyl residues on native starch grains and related maltodextrin compounds in vitro. This protein interacts with the plant SnRK AKIN11, binds starch, and is localized in the chloroplast. sex4 mutants have elevated levels of starch.","AT5G04660","CYP77A4",35.774,-4.3915,0.57077,-7.6939,1.43E-14,{"v":1.75e-13,"d":"1.75E-13"},"full_name=cytochrome P450, family 77, subfamily A, polypeptide 4. cytochrome P450, family 77, subfamily A, polypeptide 4. encodes a protein with cytochrome P450 domain","AT5G17780",null,57.608,-1.6973,0.28843,-5.8848,{"v":3.98e-09,"d":"3.98E-09"},{"v":4.76e-08,"d":"4.76E-08"},"alpha/beta-Hydrolases superfamily protein."]
["AT3G51860","CAX3",3088.7,0.43785,0.081764,5.355,{"v":8.56e-08,"d":"8.56E-08"},{"v":1.15E-6,"d":"1.15E-06"},"full_name=cation exchanger 3. cation exchanger 3.","AT5G50375","CPI1",44.866,-2.1217,0.3657,-5.8016,{"v":6.57e-09,"d":"6.57E-09"},{"v":8.55e-08,"d":"8.55E-08"},"full_name=cyclopropyl isomerase. cyclopropyl isomerase. Converts pentacyclic cyclopropyl sterols to conventional tetracyclic sterols. CPI1 function during and just after division and support gravitropism by establishing polar PIN2 localization. Required for endocytosis of PIN2","AT1G62240",null,1441.3,-1.2329,0.18632,-6.6172,{"v":3.66e-11,"d":"3.66E-11"},{"v":4.62e-10,"d":"4.62E-10"},"hypothetical protein.","AT4G09030","AGP10",1858.6,-1.3777,0.17937,-7.6807,1.58E-14,{"v":1.93e-13,"d":"1.93E-13"},"full_name=arabinogalactan protein 10. arabinogalactan protein 10. Encodes arabinogalactan protein (AGP10).","AT1G13690","ATE1",443.16,-0.68011,0.11576,-5.875,{"v":4.23e-09,"d":"4.23E-09"},{"v":5.03E-8,"d":"5.03E-08"},"full_name=ATPase E1. ATPase E1. AtE1 - stimulates the ATPase activity of DnaK/DnaJ"]
["AT1G20830","MCD1",171.04,0.90955,0.17001,5.3501,{"v":8.79E-8,"d":"8.79E-08"},{"v":1.18e-06,"d":"1.18E-06"},"full_name=MULTIPLE CHLOROPLAST DIVISION SITE 1. multiple chloroplast division site 1. Encodes MCD1 (MULTIPLE CHLOROPLAST DIVISION SITE 1). Determines the site of chloroplast division in concert with MinD (AT5G24020).","AT1G42480",null,137.62,-1.086,0.1875,-5.7918,{"v":6.96E-9,"d":"6.96E-09"},{"v":9.03e-08,"d":"9.03E-08"},"TLR4 regulator/MIR-interacting MSAP protein.","AT3G29260",null,223.19,-1.0774,0.16299,-6.6099,{"v":3.85e-11,"d":"3.85E-11"},{"v":4.84e-10,"d":"4.84E-10"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT3G49590","ATG13",67.179,-2.307,0.30059,-7.675,{"v":1.65e-14,"d":"1.65E-14"},2.01E-13,"full_name=autophagy-related 13. Autophagy-related protein 13.","AT2G41150",null,32.042,3.2675,0.55718,5.8645,{"v":4.51e-09,"d":"4.51E-09"},{"v":5.34e-08,"d":"5.34E-08"},"plant/protein."]
["AT4G28030",null,90.423,-1.2396,0.23195,-5.3443,{"v":9.08e-08,"d":"9.08E-08"},{"v":1.21e-06,"d":"1.21E-06"},"Acyl-CoA N-acyltransferases (NAT) superfamily protein.","AT3G10060",null,29.416,-2.566,0.44399,-5.7794,{"v":7.5e-09,"d":"7.50E-09"},{"v":9.68e-08,"d":"9.68E-08"},"FKBP-like peptidyl-prolyl cis-trans isomerase family protein.","AT2G33150","PKT3",5748,0.57015,0.086322,6.605,{"v":3.98e-11,"d":"3.98E-11"},{"v":4.98e-10,"d":"4.98E-10"},"full_name=peroxisomal 3-ketoacyl-CoA thiolase 3. peroxisomal 3-ketoacyl-CoA thiolase 3. Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase.","AT3G50370",null,1556.3,0.64365,0.084092,7.6541,{"v":1.95e-14,"d":"1.95E-14"},{"v":2.35e-13,"d":"2.35E-13"},"hypothetical protein.","AT1G05850","POM1",335.53,-0.71033,0.12129,-5.8567,{"v":4.72e-09,"d":"4.72E-09"},{"v":5.57e-08,"d":"5.57E-08"},"full_name=POM-POM1. Chitinase family protein. Encodes an endo chitinase-like protein AtCTL1. Essential for tolerance to heat, salt and drought stresses. Also involved in root hair development, cell expansion and response to cytokinin. Allelic to erh2. 11 alleles described in Hauser (1995). Mutant is defective in acquired thermotolerance, appears semidwarf throughout its life cycle and has extra lateral branches. There are two EMS alleles. Expression of AtHSP101 is not affected in the mutants."]
["AT1G44900","MCM2",25.052,-2.7026,0.50637,-5.3372,{"v":9.44e-08,"d":"9.44E-08"},{"v":1.25e-06,"d":"1.25E-06"},"full_name=MINICHROMOSOME MAINTENANCE 2. minichromosome maintenance (MCM2/3/5) family protein. Encodes MCM2 (MINICHROMOSOME MAINTENANCE 2), a protein essential to embryo development. Overexpression results in altered root meristem function.","AT4G36010",null,57.257,2.4657,0.42747,5.7681,{"v":8.02E-9,"d":"8.02E-09"},{"v":1.03E-7,"d":"1.03E-07"},"Pathogenesis-related thaumatin superfamily protein.","AT4G08290","UMAMIT20",134.23,1.7537,0.26587,6.596,4.22E-11,{"v":5.27e-10,"d":"5.27E-10"},"full_name=Usually multiple acids move in and out Transporters 20. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT4G22730",null,37.685,-4.4924,0.58798,-7.6403,{"v":2.17e-14,"d":"2.17E-14"},2.61E-13,"Leucine-rich repeat protein kinase family protein.","AT4G26220","CCOAOMT7",32.441,2.8728,0.49165,5.8433,{"v":5.12e-09,"d":"5.12E-09"},{"v":6.01e-08,"d":"6.01E-08"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. Encodes a caffeoyl-coenzyme A O-methyltransferase (CCoAOMT)-like protein with a strong preference for methylating the para position of flavanones and dihydroflavonols, whereas flavones and flavonols are methylated in the meta-position."]
["AT1G67100","LBD40",3157.2,0.81652,0.15319,5.3301,{"v":9.82e-08,"d":"9.82E-08"},{"v":1.3E-6,"d":"1.30E-06"},"full_name=LOB domain-containing protein 40. LOB domain-containing protein 40.","AT2G42800","RLP29",21.838,-3.5391,0.61474,-5.757,{"v":8.56e-09,"d":"8.56E-09"},{"v":1.1e-07,"d":"1.10E-07"},"full_name=receptor like protein 29. receptor like protein 29.","AT3G59010","PME61",202.35,-1.5199,0.23061,-6.5909,{"v":4.37e-11,"d":"4.37E-11"},{"v":5.43e-10,"d":"5.43E-10"},"full_name=pectin methylesterase 61. pectin methylesterase 61. Encodes PME35, a pectin methylesterase. PME35-mediated demethylesterification of the primary cell wall regulates the mechanical strength of the supporting tissue.","AT3G17420","GPK1",49.541,-9.2408,1.2122,-7.6234,{"v":2.47e-14,"d":"2.47E-14"},2.97E-13,"full_name=glyoxysomal protein kinase 1. glyoxysomal protein kinase 1. serine/threonine protein kinase-like protein","AT5G03670","TRM28",62.486,1.8633,0.31931,5.8355,{"v":5.36e-09,"d":"5.36E-09"},{"v":6.28e-08,"d":"6.28E-08"},"full_name=TON1 Recruiting Motif 28. histone-lysine N-methyltransferase SETD1B-like protein."]
["AT5G27290",null,11.159,-6.8651,1.2924,-5.312,{"v":1.08E-7,"d":"1.08E-07"},{"v":1.43e-06,"d":"1.43E-06"},"stress regulated protein.","AT1G10950","TMN1",1085.2,-0.551,0.095902,-5.7454,{"v":9.17e-09,"d":"9.17E-09"},{"v":1.17E-7,"d":"1.17E-07"},"full_name=transmembrane nine 1. transmembrane nine 1. Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.","AT2G47120",null,632.39,-0.93149,0.14166,-6.5754,{"v":4.85e-11,"d":"4.85E-11"},{"v":6E-10,"d":"6.00E-10"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT2G18960","HA1",3258.9,-0.59117,0.077681,-7.6103,{"v":2.74e-14,"d":"2.74E-14"},{"v":3.27e-13,"d":"3.27E-13"},"full_name=H(+)-ATPase 1. H[+]-ATPase 1. Encodes a plasma membrane proton ATPase. Mutants have a reduced ability to close their stomata in response to drought and are affected in stomatal but not seed responsiveness to ABA.","AT2G35790",null,333.17,-0.71587,0.12305,-5.8178,{"v":5.96e-09,"d":"5.96E-09"},{"v":6.95e-08,"d":"6.95E-08"},"transmembrane protein."]
["AT5G50790","SWEET10",1813.9,0.64223,0.12105,5.3054,{"v":1.12E-7,"d":"1.12E-07"},{"v":1.48E-6,"d":"1.48E-06"},"Nodulin MtN3 family protein. Encodes a member of the SWEET sucrose efflux transporter family proteins.","AT5G63130",null,87.911,1.3747,0.23959,5.7378,{"v":9.59e-09,"d":"9.59E-09"},{"v":1.22e-07,"d":"1.22E-07"},"Octicosapeptide/Phox/Bem1p family protein.","AT1G53170","ERF8",67.694,-1.8212,0.27725,-6.5688,{"v":5.07e-11,"d":"5.07E-11"},{"v":6.25e-10,"d":"6.25E-10"},"full_name=ethylene response factor 8. ethylene response factor 8. encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-8). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.","AT4G29070",null,446.38,-1.0194,0.1341,-7.6013,{"v":2.93e-14,"d":"2.93E-14"},{"v":3.49e-13,"d":"3.49E-13"},"Phospholipase A2 family protein.","AT3G01210","BPL6",299.18,-0.76657,0.13188,-5.8126,{"v":6.15e-09,"d":"6.15E-09"},{"v":7.14e-08,"d":"7.14E-08"},"RNA-binding (RRM/RBD/RNP motifs) family protein."]
["AT5G60100","PRR3",512.81,0.73774,0.13934,5.2946,{"v":1.19e-07,"d":"1.19E-07"},{"v":1.56e-06,"d":"1.56E-06"},"full_name=pseudo-response regulator 3. pseudo-response regulator 3. Encodes pseudo-response regulator 3 (APRR3/PRR3). PRR3 transcript levels vary in a circadian pattern with peak expression at dusk under long and short day conditions. PRR3 affects the period of the circadian clock and seedlings with reduced levels of PRR3 have shorter periods, based on transcriptional assays of clock-regulated genes. PRR3 is expressed in the vasculature of cotyledons and leaves where it may help stabilize the TOC1 protein by preventing interactions between TOC1 and the F-box protein ZTL.","AT5G52230","MBD13",757.08,-0.68016,0.11869,-5.7307,{"v":1E-8,"d":"1.00E-08"},{"v":1.27e-07,"d":"1.27E-07"},"full_name=methyl-CPG-binding domain protein 13. methyl-CPG-binding domain protein 13. Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.","AT4G39090","RD19",1926.1,-1.1791,0.1798,-6.5577,{"v":5.47e-11,"d":"5.47E-11"},{"v":6.71e-10,"d":"6.71E-10"},"full_name=RESPONSIVE TO DEHYDRATION 19. Papain family cysteine protease. Similar to cysteine proteinases, induced by desiccation but not abscisic acid. Required for RRS1-R mediated resistance against Ralstonia solanacearum. Interacts with the R. solanacearum type III effector PopP2. RD19 associates with PopP2 to form a nuclear complex that is required for activation of the RRS1-R%E2%80%93mediated resistance response.","AT1G50480","THFS",224.74,1.2101,0.15937,7.5929,{"v":3.13e-14,"d":"3.13E-14"},{"v":3.71e-13,"d":"3.71E-13"},"full_name=10-formyltetrahydrofolate synthetase. 10-formyltetrahydrofolate synthetase. 10-formyltetrahydrofolate synthetase (THFS) mRNA, complete","AT2G25620","DBP1",102.25,-1.2642,0.21819,-5.794,{"v":6.87e-09,"d":"6.87E-09"},{"v":7.94e-08,"d":"7.94E-08"},"full_name=DNA-binding protein phosphatase 1. DNA-binding protein phosphatase 1. Encodes DBP1, a member of the DBP factors (DNA-binding protein phosphatases) featuring sequence-specific DNA-binding and protein phosphatase activity. DBP1 is involved in plant-potyvirus interactions. Loss-of-function of DBP1 renders resistance to potyviruses."]
["AT4G03415","PP2C52",242.68,-0.7966,0.15082,-5.2818,{"v":1.28e-07,"d":"1.28E-07"},{"v":1.66E-6,"d":"1.66E-06"},"full_name=2C-type protein phosphatase 52. Protein phosphatase 2C family protein. Encodes a myristoylated 2C-type protein phosphatase that interacts with AGB1 and is localized to the plasma membrane.","AT5G40770","PHB3",310.22,0.84618,0.14784,5.7235,{"v":1.04E-8,"d":"1.04E-08"},{"v":1.32e-07,"d":"1.32E-07"},"full_name=prohibitin 3. prohibitin 3. prohibitin 3","AT2G34570","MEE21",137.67,1.3746,0.20973,6.554,{"v":5.6E-11,"d":"5.60E-11"},{"v":6.84e-10,"d":"6.84E-10"},"full_name=maternal effect embryo arrest 21. PIN domain-like family protein.","AT1G04820","TUA4",39.367,-3.2659,0.43079,-7.5811,{"v":3.43e-14,"d":"3.43E-14"},{"v":4.05e-13,"d":"4.05E-13"},"full_name=tubulin alpha-4 chain. tubulin alpha-4 chain. Encodes an alpha tubulin isoform that is expressed in roots, leaves and flowers.","AT3G01060",null,233.24,-0.82466,0.14247,-5.7883,{"v":7.11e-09,"d":"7.11E-09"},{"v":8.18e-08,"d":"8.18E-08"},"lysine-tRNA ligase."]
["AT1G19570","DHAR1",2461.7,0.47452,0.089941,5.276,{"v":1.32e-07,"d":"1.32E-07"},{"v":1.71e-06,"d":"1.71E-06"},"full_name=dehydroascorbate reductase. dehydroascorbate reductase. Encodes a member of the dehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica.","AT5G47190","PRPL19",61.81,-1.5943,0.27878,-5.7189,{"v":1.07E-8,"d":"1.07E-08"},{"v":1.35E-7,"d":"1.35E-07"},"Ribosomal protein L19 family protein.","AT4G19410","PAE7",926.36,-0.73974,0.11304,-6.5439,{"v":5.99e-11,"d":"5.99E-11"},{"v":7.29e-10,"d":"7.29E-10"},"Pectinacetylesterase family protein.","AT3G62820",null,60.951,-2.3607,0.31251,-7.5537,4.23E-14,4.98E-13,"Plant invertase/pectin methylesterase inhibitor superfamily protein.","AT4G17840","BCM4",4438.6,-0.37474,0.064846,-5.7789,{"v":7.52e-09,"d":"7.52E-09"},{"v":8.62e-08,"d":"8.62E-08"},"CAAX protease self-immunity protein."]
["AT5G62390","BAG7",767.65,-0.61567,0.11672,-5.2746,{"v":1.33e-07,"d":"1.33E-07"},{"v":1.72E-6,"d":"1.72E-06"},"full_name=BCL-2-associated athanogene 7. BCL-2-associated athanogene 7. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. Localized to the ER. Necessary for the proper maintenance of the unfolded protein response during heat and cold tolerance.","AT3G57470",null,403.69,-0.71406,0.12487,-5.7182,{"v":1.08e-08,"d":"1.08E-08"},{"v":1.35E-7,"d":"1.35E-07"},"Insulinase (Peptidase family M16) family protein.","AT3G53730",null,266.83,0.96716,0.14787,6.5408,{"v":6.12e-11,"d":"6.12E-11"},{"v":7.44e-10,"d":"7.44E-10"},"Histone superfamily protein.","AT2G23800","GGPS2",44.327,-2.9639,0.39241,-7.5532,{"v":4.25e-14,"d":"4.25E-14"},{"v":5e-13,"d":"5.00E-13"},"full_name=geranylgeranyl pyrophosphate synthase 2. geranylgeranyl pyrophosphate synthase 2. encodes an endoplasmic reticulum-targeted geranylgeranyl pyrophosphate synthase","AT5G15240",null,102.11,1.416,0.24502,5.7788,{"v":7.52e-09,"d":"7.52E-09"},{"v":8.62e-08,"d":"8.62E-08"},"Transmembrane amino acid transporter family protein."]
["AT5G24316",null,1385,0.78824,0.14977,5.2631,{"v":1.42E-7,"d":"1.42E-07"},{"v":1.83e-06,"d":"1.83E-06"},"proline-rich family protein.","AT5G40760","G6PD6",887,-0.54868,0.096128,-5.7078,{"v":1.14E-8,"d":"1.14E-08"},{"v":1.43E-7,"d":"1.43E-07"},"full_name=glucose-6-phosphate dehydrogenase 6. glucose-6-phosphate dehydrogenase 6. Encodes a cytosolic glucose-6-phosphate dehydrogenase that is insensitive to reduction by DTT and whose mRNA is expressed ubiquitously.","AT4G13930","SHM4",380.78,-0.95065,0.14551,-6.533,{"v":6.45e-11,"d":"6.45E-11"},{"v":7.81e-10,"d":"7.81E-10"},"full_name=serine hydroxymethyltransferase 4. serine hydroxymethyltransferase 4. Encodes a serine hydroxymethyltransferase maximally expressed in root","AT1G55850","CSLE1",782.97,0.84245,0.11168,7.5432,{"v":4.59e-14,"d":"4.59E-14"},{"v":5.37e-13,"d":"5.37E-13"},"full_name=cellulose synthase like E1. cellulose synthase like E1. encodes a protein similar to cellulose synthase","AT1G08920","ESL1",23.256,-4.3558,0.75668,-5.7565,{"v":8.59e-09,"d":"8.59E-09"},{"v":9.81e-08,"d":"9.81E-08"},"full_name=ERD (early response to dehydration) six-like 1. ERD (early response to dehydration) six-like 1. Encodes ESL1, a transporter for monosaccharides."]
["AT4G05190","ATK5",10.937,-6.8338,1.2999,-5.257,{"v":1.46e-07,"d":"1.46E-07"},{"v":1.88E-6,"d":"1.88E-06"},"full_name=kinesin 5. kinesin 5. ATK5 encodes a kinesin protein involved in microtubule spindle morphogenesis. It acts as a minus-end directed motor as well as a plus-end tracking protein (+TIP). Localizes to mitotic spindle midzones and regions rich in growing plus-ends within phragmoplasts.","AT2G25420",null,132.51,-1.1224,0.19689,-5.7005,{"v":1.19e-08,"d":"1.19E-08"},{"v":1.49E-7,"d":"1.49E-07"},"transducin family protein / WD-40 repeat family protein.","AT4G37300","MEE59",259.88,-1.5378,0.2357,-6.5245,{"v":6.82e-11,"d":"6.82E-11"},{"v":8.24e-10,"d":"8.24E-10"},"full_name=maternal effect embryo arrest 59. maternal effect embryo arrest 59.","AT1G16850",null,3913.9,-0.78387,0.10429,-7.5161,{"v":5.64e-14,"d":"5.64E-14"},{"v":6.59e-13,"d":"6.59E-13"},"transmembrane protein.","AT5G40840","SYN2",725.89,0.54798,0.095381,5.7452,{"v":9.18e-09,"d":"9.18E-09"},{"v":1.04E-7,"d":"1.04E-07"},"Rad21/Rec8-like family protein. Cohesion family protein SYN2 (SYN2)."]
["AT5G64080","XYP1",6710.1,0.54456,0.10392,5.2403,{"v":1.6E-7,"d":"1.60E-07"},{"v":2.05e-06,"d":"2.05E-06"},"full_name=xylogen protein 1. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT2G46930","PAE3",291.32,-0.78843,0.13903,-5.671,{"v":1.42E-8,"d":"1.42E-08"},{"v":1.76e-07,"d":"1.76E-07"},"Pectinacetylesterase family protein. Encodes a pectin acetylesterase that removes cell wall acetate associated with pectin formation in Arabidopsis leaves.","AT1G54360","TAF6B",205.83,-1.11,0.17071,-6.5022,{"v":7.91e-11,"d":"7.91E-11"},{"v":9.5e-10,"d":"9.50E-10"},"full_name=TBP-ASSOCIATED FACTOR 6B. TBP-ASSOCIATED FACTOR 6B. Encodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6.","AT2G30950","VAR2",768.63,-0.7749,0.10342,-7.4928,{"v":6.74e-14,"d":"6.74E-14"},7.82E-13,"full_name=VARIEGATED 2. FtsH extracellular protease family. Metalloprotease that functions in thylakoid membrane biogenesis. Involved in the repair of PSII following damaged incurred during photoinhibition. Forms a complex with VAR1. Mutants show a variegated phenotype, which decreases during development. Transcript and protein levels increase with light intensity. In plsp1-1 mutant plastids, the nonmature form of the protein localizes in the membrane.","AT2G36900","MEMB11",267.96,0.81239,0.14169,5.7337,{"v":9.83e-09,"d":"9.83E-09"},{"v":1.11E-7,"d":"1.11E-07"},"full_name=membrin 11. membrin 11. member of Membrin Gene Family"]
["AT5G39420","cdc2cAt",27.812,-2.5439,0.48654,-5.2284,{"v":1.71e-07,"d":"1.71E-07"},{"v":2.18e-06,"d":"2.18E-06"},"full_name=CDC2C. CDC2C.","AT4G39540","SK2",201.43,-0.89192,0.15746,-5.6643,{"v":1.48E-8,"d":"1.48E-08"},{"v":1.82e-07,"d":"1.82E-07"},"full_name=shikimate kinase 2. shikimate kinase 2. Encodes a shikimate kinase. Its transcripts appear to be expressed in vegetative tissues and developing embryos. SK2 transcript levels rise in response to Phytophthora infestans spores. SK2 is believed to be localized to the chloroplast.","AT5G04000",null,441.41,1.1239,0.17294,6.4987,{"v":8.1e-11,"d":"8.10E-11"},{"v":9.7e-10,"d":"9.70E-10"},"hypothetical protein.","AT1G13340","ISTL6",270.78,1.5308,0.20458,7.4826,{"v":7.29e-14,"d":"7.29E-14"},{"v":8.44e-13,"d":"8.44E-13"},"Regulator of Vps4 activity in the MVB pathway protein.","AT2G14878",null,6324.8,0.41505,0.072452,5.7287,{"v":1.01e-08,"d":"1.01E-08"},{"v":1.14E-7,"d":"1.14E-07"},"other_RNA."]
["AT3G11210",null,25.356,-2.3551,0.45146,-5.2168,{"v":1.82e-07,"d":"1.82E-07"},{"v":2.31e-06,"d":"2.31E-06"},"SGNH hydrolase-type esterase superfamily protein.","AT2G29200","PUM1",252.14,0.87713,0.15511,5.6548,{"v":1.56e-08,"d":"1.56E-08"},{"v":1.92E-7,"d":"1.92E-07"},"full_name=pumilio 1. pumilio 1. Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.","AT1G02150",null,209.67,1.1753,0.18109,6.4902,{"v":8.57e-11,"d":"8.57E-11"},{"v":1.02E-9,"d":"1.02E-09"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT3G01740",null,536.88,0.79014,0.10572,7.4736,{"v":7.8e-14,"d":"7.80E-14"},{"v":9E-13,"d":"9.00E-13"},"Mitochondrial ribosomal protein L37.","AT3G58660",null,673.23,0.58221,0.10176,5.7213,{"v":1.06e-08,"d":"1.06E-08"},{"v":1.19e-07,"d":"1.19E-07"},"Ribosomal protein L1p/L10e family."]
["AT3G05165",null,342.01,0.73608,0.14128,5.2099,{"v":1.89e-07,"d":"1.89E-07"},{"v":2.39E-6,"d":"2.39E-06"},"Major facilitator superfamily protein.","AT5G26040","HDA2",273.43,0.84711,0.15026,5.6375,{"v":1.73e-08,"d":"1.73E-08"},{"v":2.11E-7,"d":"2.11E-07"},"full_name=histone deacetylase 2. histone deacetylase 2. Class III RPD3 type protein. Encodes HDA2, a member of the histone deacetylase family proteins.","AT3G02540","RAD23C",126.86,-1.5413,0.23783,-6.4805,{"v":9.14e-11,"d":"9.14E-11"},{"v":1.09E-9,"d":"1.09E-09"},"full_name=RADIATION SENSITIVE23C. Rad23 UV excision repair protein family. Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.","AT1G17030",null,46.938,-3.1829,0.42682,-7.4573,8.83E-14,{"v":1.01e-12,"d":"1.01E-12"},"hypothetical protein.","AT3G12130","KHZ1",366.92,0.69889,0.12229,5.7152,{"v":1.1e-08,"d":"1.10E-08"},{"v":1.23E-7,"d":"1.23E-07"},"KH domain-containing protein / zinc finger (CCCH type) family protein."]
["AT3G12730",null,141.63,0.98863,0.18996,5.2043,{"v":1.95e-07,"d":"1.95E-07"},{"v":2.45e-06,"d":"2.45E-06"},"Homeodomain-like superfamily protein.","AT3G04940","CYSD1",162.96,-1.0432,0.18524,-5.6315,{"v":1.79e-08,"d":"1.79E-08"},{"v":2.18e-07,"d":"2.18E-07"},"full_name=cysteine synthase D1. cysteine synthase D1. Encodes cysteine synthase CysD1.","AT5G03560",null,224.83,0.98156,0.15168,6.4714,{"v":9.71e-11,"d":"9.71E-11"},{"v":1.15E-9,"d":"1.15E-09"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT5G56369",null,34.106,-4.7855,0.64256,-7.4476,{"v":9.5e-14,"d":"9.50E-14"},1.09E-12,"Defensin-like (DEFL) family protein. Encodes a defensin-like (DEFL) family protein.","AT1G01250",null,58.161,-1.708,0.29943,-5.7043,{"v":1.17e-08,"d":"1.17E-08"},{"v":1.3E-7,"d":"1.30E-07"},"Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY."]
["AT1G07135",null,25.253,-2.5879,0.49818,-5.1948,{"v":2.05E-7,"d":"2.05E-07"},{"v":2.57E-6,"d":"2.57E-06"},"glycine-rich protein.","AT1G80540",null,44.409,-1.9554,0.34774,-5.6231,{"v":1.88E-8,"d":"1.88E-08"},{"v":2.28E-7,"d":"2.28E-07"},"envelope glycoprotein B.","AT2G43520","TI2",487.95,-1.2586,0.19489,-6.4579,1.06E-10,{"v":1.25E-9,"d":"1.25E-09"},"full_name=trypsin inhibitor protein 2. trypsin inhibitor protein 2. Encodes putative trypsin inhibitor protein which may function in defense against herbivory. Member of the defensin-like (DEFL) family.","AT4G01985",null,61.696,-2.8349,0.38091,-7.4425,{"v":9.88e-14,"d":"9.88E-14"},1.13E-12,"hypothetical protein.","AT5G10630","HBS1",285.63,0.78223,0.13722,5.7007,{"v":1.19e-08,"d":"1.19E-08"},{"v":1.33e-07,"d":"1.33E-07"},"Translation elongation factor EF1A/initiation factor IF2gamma family protein."]
["AT3G61680","PLIP1",1453.2,0.72491,0.1397,5.1891,{"v":2.11E-7,"d":"2.11E-07"},{"v":2.65E-6,"d":"2.65E-06"},"alpha/beta-Hydrolases superfamily protein.","AT2G18900",null,127.28,1.0866,0.1938,5.6068,{"v":2.06e-08,"d":"2.06E-08"},{"v":2.5e-07,"d":"2.50E-07"},"Transducin/WD40 repeat-like superfamily protein.","AT5G49650","XK-2",196.51,-1.1048,0.17117,-6.4542,1.09E-10,{"v":1.28e-09,"d":"1.28E-09"},"full_name=xylulose kinase-2. xylulose kinase-2. Encodes a cytosolic protein capable of phosphorylating xylulose and deoxy-xylulose. It most likely plays a role in producing precursors for isoprenoid biosynthesis.","AT3G14270","FAB1B",335.46,-1.1093,0.14915,-7.4374,1.03E-13,{"v":1.17e-12,"d":"1.17E-12"},"full_name=FORMS APLOID AND BINUCLEATE CELLS 1B. phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. FAB1A and FAB1B complement the enlarged vacuolar phenotype of the fission yeast ste12delta mutant.","AT4G24160",null,220.16,0.86087,0.15115,5.6955,{"v":1.23e-08,"d":"1.23E-08"},{"v":1.36E-7,"d":"1.36E-07"},"alpha/beta-Hydrolases superfamily protein. Encodes a soluble lysophosphatidic acid acyltransferase with additional triacylglycerol lipase and phosphatidylcholine hydrolyzing enzymatic activities. Plays a pivotal role in maintaining the lipid homeostasis by regulating both phospholipid and neutral lipid levels."]
["AT5G18170","GDH1",751.32,-0.57812,0.11177,-5.1725,{"v":2.31e-07,"d":"2.31E-07"},{"v":2.88E-6,"d":"2.88E-06"},"full_name=glutamate dehydrogenase 1. glutamate dehydrogenase 1. Encodes the 43 kDa alpha-subunit of the glutamate dehydrogenase with a putative mitochondrial transit polypeptide and NAD(H)- and alpha-ketoglutarate-binding domains. Mitochondrial localization confirmed by subcellular fractionation. Combines in several ratios with GDH2 protein (GDH-beta) to form seven isoenzymes. Catalyzes the cleavage of glycine residues. May be involved in ammonia assimilation under conditions of inorganic nitrogen excess. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.","AT1G67340",null,146.5,1.0461,0.18699,5.5943,{"v":2.21e-08,"d":"2.21E-08"},{"v":2.67E-7,"d":"2.67E-07"},"HCP-like superfamily protein with MYND-type zinc finger.","AT5G13710","SMT1",67.732,-1.808,0.28087,-6.4371,{"v":1.22e-10,"d":"1.22E-10"},{"v":1.42e-09,"d":"1.42E-09"},"full_name=sterol methyltransferase 1. sterol methyltransferase 1. SMT1 controls the level of cholesterol in plants","AT5G47220","ERF2",61.503,2.3504,0.31718,7.4102,{"v":1.26e-13,"d":"1.26E-13"},1.43E-12,"full_name=ethylene responsive element binding factor 2. ethylene responsive element binding factor 2. Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box%E2%80%93dependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.","AT4G35580","NTL9",954.28,-0.49706,0.087475,-5.6823,{"v":1.33E-8,"d":"1.33E-08"},{"v":1.47e-07,"d":"1.47E-07"},"full_name=NAC transcription factor-like 9. NAC transcription factor-like 9. Encodes a calmodulin-binding NAC protein (CBNAC). Contains calmodulin-binding domain in the C-terminus of the protein. Functions as a calmodulin-regulated transcriptional repressor."]
["AT3G16180","NRT1.12",171.56,-0.92536,0.17917,-5.1648,{"v":2.41E-7,"d":"2.41E-07"},{"v":2.99e-06,"d":"2.99E-06"},"Major facilitator superfamily protein. Encodes a low affinity nitrate transporter that is expressed in the plasma membrane and found in the phloem of the major veins of leaves. It is responsible for nitrate redistribution to young leaves.","AT3G59400","GUN4",19.74,-5.2297,0.93664,-5.5835,{"v":2.36E-8,"d":"2.36E-08"},{"v":2.83e-07,"d":"2.83E-07"},"full_name=GENOMES UNCOUPLED 4. protein GENOMES UNCOUPLED 4. GUN, genomes uncoupled, is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast. Binds to the magnesium chelatase complex and promotes formation of the substrate,a tetrapyrrole signaling molecule. Porphyrin-binding protein that enhances the activity of Mg-chelatase. Although required for chlorophyll accumulation under normal growth conditions, GUN4 is not essential for chlorophyll synthesis.","AT5G35620","LSP1",362.78,0.92756,0.14437,6.4248,{"v":1.32e-10,"d":"1.32E-10"},{"v":1.54e-09,"d":"1.54E-09"},"full_name=LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1. Eukaryotic initiation factor 4E protein. Cap-binding protein, binds to the 5' cap structure of nuclear-encoded mRNAs. Mutant is resistant to potyvirus infection.","AT1G05280",null,65.607,-7.7872,1.0518,-7.4034,{"v":1.33e-13,"d":"1.33E-13"},{"v":1.49e-12,"d":"1.49E-12"},"ERV-F (C)1 provirus ancestral Env polyprotein, putative (DUF604).","AT4G11320","CP2",297.33,-7.6503,1.3495,-5.6689,{"v":1.44E-8,"d":"1.44E-08"},{"v":1.58e-07,"d":"1.58E-07"},"Papain family cysteine protease."]
["AT5G14780","FDH",1366.9,-0.59418,0.11524,-5.156,{"v":2.52e-07,"d":"2.52E-07"},{"v":3.12e-06,"d":"3.12E-06"},"full_name=formate dehydrogenase. formate dehydrogenase. Encodes a NAD-dependent formate dehydrogenase.","AT3G13450","DIN4",65.294,-1.9441,0.34857,-5.5774,{"v":2.44E-8,"d":"2.44E-08"},{"v":2.92e-07,"d":"2.92E-07"},"full_name=DARK INDUCIBLE 4. Transketolase family protein. branched chain alpha-keto acid dehydrogenase E1 beta","AT4G37080",null,162.23,-1.3993,0.21819,-6.4132,1.43E-10,{"v":1.65e-09,"d":"1.65E-09"},"ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function, DUF547).","AT3G49160",null,147.13,-1.6159,0.21863,-7.3911,{"v":1.46e-13,"d":"1.46E-13"},{"v":1.64e-12,"d":"1.64E-12"},"pyruvate kinase family protein. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.","AT1G20670",null,228.81,0.87348,0.15445,5.6556,{"v":1.55E-8,"d":"1.55E-08"},{"v":1.7e-07,"d":"1.70E-07"},"DNA-binding bromodomain-containing protein."]
["AT5G41670","PGD3",549.2,-0.84448,0.16402,-5.1487,{"v":2.62e-07,"d":"2.62E-07"},{"v":3.23E-6,"d":"3.23E-06"},"6-phosphogluconate dehydrogenase family protein.","AT4G39890","RABH1c",46.598,1.8236,0.32769,5.565,{"v":2.62E-8,"d":"2.62E-08"},{"v":3.13e-07,"d":"3.13E-07"},"full_name=RAB GTPase homolog H1C. RAB GTPase homolog H1C.","AT5G64430",null,470.81,0.92748,0.14487,6.4022,{"v":1.53e-10,"d":"1.53E-10"},{"v":1.77e-09,"d":"1.77E-09"},"Octicosapeptide/Phox/Bem1p family protein.","AT2G43020","PAO2",314.02,-1.3126,0.17781,-7.3819,{"v":1.56e-13,"d":"1.56E-13"},1.75E-12,"full_name=polyamine oxidase 2. polyamine oxidase 2. Encodes a polyamine oxidase.","AT4G18660",null,279.14,0.84935,0.15046,5.6449,{"v":1.65e-08,"d":"1.65E-08"},{"v":1.8E-7,"d":"1.80E-07"},"delay of germination protein."]
["AT2G44730",null,256.81,-0.73615,0.14304,-5.1466,{"v":2.65E-7,"d":"2.65E-07"},{"v":3.27E-6,"d":"3.27E-06"},"Alcohol dehydrogenase transcription factor Myb/SANT-like family protein.","AT5G07500","PEI1",2342.5,-0.47607,0.085569,-5.5636,{"v":2.64e-08,"d":"2.64E-08"},{"v":3.15E-7,"d":"3.15E-07"},"Zinc finger C-x8-C-x5-C-x3-H type family protein. Encodes an embryo-specific zinc finger transcription factor required for heart-stage embryo formation.","AT3G06630",null,272.05,1.0711,0.16739,6.3991,1.56E-10,{"v":1.81E-9,"d":"1.81E-09"},"protein kinase family protein.","AT4G15400","BIA1",32.209,-5.401,0.7317,-7.3814,{"v":1.57e-13,"d":"1.57E-13"},1.75E-12,"full_name=BRASSINOSTEROID INACTIVATOR1. HXXXD-type acyl-transferase family protein. Encodes BIA1, a member of the BAHD acyltransferase family. Plays a role in controlling brassinosteroids levels, particularly in the root and hypocotyl in darkness.","AT2G48150","GPX4",20.779,4.1705,0.73907,5.643,{"v":1.67e-08,"d":"1.67E-08"},{"v":1.82e-07,"d":"1.82E-07"},"full_name=glutathione peroxidase 4. glutathione peroxidase 4. Encodes glutathione peroxidase."]
["AT1G72250","MDKIN1",15.75,-4.4102,0.85893,-5.1345,{"v":2.83e-07,"d":"2.83E-07"},{"v":3.47e-06,"d":"3.47E-06"},"Di-glucose binding protein with Kinesin motor domain-containing protein.","AT3G62290","ARFA1E",1529.1,-0.51729,0.093297,-5.5446,{"v":2.95e-08,"d":"2.95E-08"},{"v":3.5e-07,"d":"3.50E-07"},"full_name=ADP-ribosylation factor A1E. ADP-ribosylation factor A1E. A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.","AT4G02410","LECRK-IV.3",29.712,3.5262,0.55213,6.3865,{"v":1.7e-10,"d":"1.70E-10"},{"v":1.95e-09,"d":"1.95E-09"},"Concanavalin A-like lectin protein kinase family protein.","AT5G58000","RTN21",41.277,-3.2032,0.43533,-7.358,{"v":1.87e-13,"d":"1.87E-13"},2.08E-12,"Reticulon family protein.","AT1G76180","ERD14",55.042,-1.9025,0.33759,-5.6355,{"v":1.75e-08,"d":"1.75E-08"},{"v":1.89e-07,"d":"1.89E-07"},"full_name=EARLY RESPONSE TO DEHYDRATION 14. Dehydrin family protein. Encodes a dehydrin protein whose expression is induced early on in response to dehydration stress. This gene's expression to cold occurs in two waves, with early induction occurring within 1 h and secondary induction occurring 5 h after the beginning of cold stress. Expression is also induced in response to ABA but not in response to 2,4-D, BA, and GA3. ERD14 protein is capable of binding Ca2+, especially when the protein is phosphorylated."]
["AT5G03650","SBE2.2",372.87,-0.70146,0.1369,-5.1238,{"v":2.99e-07,"d":"2.99E-07"},{"v":3.66e-06,"d":"3.66E-06"},"full_name=starch branching enzyme 2.2. starch branching enzyme 2.2. Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.","AT2G37050",null,270.24,-0.83546,0.15094,-5.5349,{"v":3.11e-08,"d":"3.11E-08"},{"v":3.68e-07,"d":"3.68E-07"},"Leucine-rich repeat protein kinase family protein.","AT3G49570","LSU3",319.34,1.6465,0.25826,6.3752,{"v":1.83e-10,"d":"1.83E-10"},{"v":2.1e-09,"d":"2.10E-09"},"full_name=RESPONSE TO LOW SULFUR 3. response to low sulfur 3.","AT2G31945",null,126.5,-2.2086,0.30031,-7.3545,{"v":1.92e-13,"d":"1.92E-13"},2.13E-12,"transmembrane protein.","AT3G60210","GROES",242.92,-0.8344,0.14814,-5.6326,{"v":1.78e-08,"d":"1.78E-08"},{"v":1.92E-7,"d":"1.92E-07"},"GroES-like family protein."]
["AT1G76310","CYCB2;4",9.9276,-6.6952,1.3085,-5.1166,{"v":3.11e-07,"d":"3.11E-07"},{"v":3.79e-06,"d":"3.79E-06"},"full_name=CYCLIN B2;4. CYCLIN B2;4. core cell cycle genes","AT2G20990","SYTA",870.95,0.60142,0.10885,5.5253,{"v":3.29e-08,"d":"3.29E-08"},{"v":3.88e-07,"d":"3.88E-07"},"full_name=synaptotagmin A. synaptotagmin A. Encodes a plasma membrane localized protein with similarity to synaptotagmins, a class of membrane trafficking proteins. SYT1 is expressed in all tissues. Loss of function mutations show hypersensitivity to NaCl and electrolyte leakage from the plasma membrane. SYT1 also affects calcium dependent freezing tolerance. SYT1 probably plays a role in membrane repair such as membrane resealing after freezing induced damage. Regulates endocytosis endosome recycling at the plasma membrane, but not membrane traffic along the secretory pathway.","AT2G20050",null,150.89,-1.1691,0.18355,-6.3691,{"v":1.9e-10,"d":"1.90E-10"},{"v":2.17e-09,"d":"2.17E-09"},"protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.","AT1G55760","SIBP1",40.491,-8.9482,1.2191,-7.3398,2.14E-13,2.36E-12,"BTB/POZ domain-containing protein.","AT1G50640","ERF3",221.26,0.84878,0.15108,5.6179,{"v":1.93e-08,"d":"1.93E-08"},{"v":2.08e-07,"d":"2.08E-07"},"full_name=ethylene responsive element binding factor 3. ethylene responsive element binding factor 3. encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole."]
["AT5G01410","RSR4",372.81,0.6726,0.13168,5.108,{"v":3.26e-07,"d":"3.26E-07"},{"v":3.95e-06,"d":"3.95E-06"},"full_name=REDUCED SUGAR RESPONSE 4. Aldolase-type TIM barrel family protein. Encodes a protein predicted to function in tandem with PDX2 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis.","AT1G64950","CYP89A5",430.94,0.71985,0.13048,5.517,{"v":3.45e-08,"d":"3.45E-08"},{"v":4.05e-07,"d":"4.05E-07"},"full_name=cytochrome P450, family 89, subfamily A, polypeptide 5. cytochrome P450, family 89, subfamily A, polypeptide 5. member of CYP89A","AT5G64740","CESA6",748.64,-0.80755,0.12719,-6.349,2.17E-10,{"v":2.47e-09,"d":"2.47E-09"},"full_name=cellulose synthase 6. cellulose synthase 6. Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.","AT3G62690","ATL5",175.08,-1.2631,0.17223,-7.334,{"v":2.23e-13,"d":"2.23E-13"},2.46E-12,"full_name=AtL5. AtL5. Encodes a RING-H2 zinc finger protein related to ATL2. The ATL gene family is represented by fifteen sequences that contain, in addition to the RING, a transmembrane domain which is located in most of them towards the N-terminal end.","AT4G16160","ATOEP16-2",15862,-0.40905,0.073064,-5.5985,{"v":2.16e-08,"d":"2.16E-08"},{"v":2.32e-07,"d":"2.32E-07"},"Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein. Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family. Two OEP16 genes are closely related to each other and are conserved in all land plants, OEP16-2, also named OEP16-S, and OEP16-1 (renamed OEP16-L) are result of the gene duplication event that occurred prior to divergence of bryophytes and seed plants. Predominantly expressed in seed and is not inducible by cold treatment. atOEP16-S gained an additional exon. The promoter region of atOEP16-S (but not atOEP16-L) contains multiple G-box ABA-responsive elements. The atOEP16-S promoter conferred developmentally regulated seed- and pollen-specific GUS expression in tobacco."]
["AT5G56850",null,65.093,-1.3771,0.27028,-5.0952,{"v":3.48e-07,"d":"3.48E-07"},{"v":4.21e-06,"d":"4.21E-06"},"hypothetical protein.","AT2G33580","LYK5",87.831,1.2946,0.23508,5.507,{"v":3.65e-08,"d":"3.65E-08"},{"v":4.27E-7,"d":"4.27E-07"},"full_name=LysM-containing receptor-like kinase 5. Protein kinase superfamily protein. Encodes a LysM-containing receptor-like kinase. LYK5 is a major chitin receptor and forms a chitin-induced complex with related kinase CERK1.","AT5G52070",null,248.74,1.1236,0.17729,6.3374,{"v":2.34e-10,"d":"2.34E-10"},{"v":2.65e-09,"d":"2.65E-09"},"Agenet domain-containing protein.","AT3G13410",null,354.6,-0.93249,0.12746,-7.3159,{"v":2.56e-13,"d":"2.56E-13"},{"v":2.8e-12,"d":"2.80E-12"},"2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase.","AT5G01990","PILS6",275.54,-0.77677,0.13902,-5.5874,{"v":2.31e-08,"d":"2.31E-08"},{"v":2.46e-07,"d":"2.46E-07"},"Auxin efflux carrier family protein."]
["AT2G01590","CRR3",15.225,-4.0334,0.79274,-5.088,{"v":3.62e-07,"d":"3.62E-07"},{"v":4.36e-06,"d":"4.36E-06"},"full_name=CHLORORESPIRATORY REDUCTION 3. chlororespiratory reduction 3. Likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located in the membrane fraction of chloroplast. Mutant has impaired NAD(P)H dehydrogenase activity.","AT4G27700",null,93.053,-1.2241,0.22272,-5.4961,{"v":3.88e-08,"d":"3.88E-08"},{"v":4.53e-07,"d":"4.53E-07"},"Rhodanese/Cell cycle control phosphatase superfamily protein.","AT5G13030","SELO",1011.2,0.77324,0.12226,6.3246,2.54E-10,{"v":2.87e-09,"d":"2.87E-09"},"selenoprotein O.","AT4G34250","KCS16",33.581,-4.1524,0.56897,-7.2981,{"v":2.92e-13,"d":"2.92E-13"},{"v":3.19e-12,"d":"3.19E-12"},"full_name=3-ketoacyl-CoA synthase 16. 3-ketoacyl-CoA synthase 16. Encodes KCS16, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT3G51260","PAD1",417.72,-0.67698,0.12134,-5.5792,{"v":2.42e-08,"d":"2.42E-08"},{"v":2.57e-07,"d":"2.57E-07"},"full_name=20S proteasome alpha subunit PAD1. 20S proteasome alpha subunit PAD1. 20S proteosomal alpha subunits. Interacts with SnRK, SKP1/ASK1 during proteasomal binding of an SCF ubiquitin ligase."]
["AT4G25750","ABCG4",17.855,-3.9972,0.78674,-5.0808,{"v":3.76e-07,"d":"3.76E-07"},{"v":4.51E-6,"d":"4.51E-06"},"full_name=ATP-binding cassette G4. ABC-2 type transporter family protein.","AT1G78760",null,12.598,-7.0508,1.2842,-5.4903,{"v":4.01e-08,"d":"4.01E-08"},{"v":4.66e-07,"d":"4.66E-07"},"F-box/RNI-like superfamily protein.","AT2G06010","ORG4",400.62,0.83801,0.13276,6.3124,{"v":2.75e-10,"d":"2.75E-10"},{"v":3.1E-9,"d":"3.10E-09"},"full_name=OBP3-responsive gene 4. OBP3-responsive protein 4 (ORG4). encodes a novel protein whose expression level is induced in lines overexpressing salicylic-acid (SA)-inducible Arabidopsis DNA binding with one finger (Dof) transcription factor, called OBF-binding protein 3.","AT1G55265",null,30.241,-3.8795,0.533,-7.2786,{"v":3.37e-13,"d":"3.37E-13"},{"v":3.67e-12,"d":"3.67E-12"},"DUF538 family protein, putative (Protein of unknown function, DUF538).","AT5G43770",null,2882.4,-0.62683,0.11247,-5.5734,{"v":2.5e-08,"d":"2.50E-08"},{"v":2.65E-7,"d":"2.65E-07"},"proline-rich family protein."]
["AT1G77520",null,182.53,-0.93527,0.18436,-5.073,{"v":3.92e-07,"d":"3.92E-07"},{"v":4.68e-06,"d":"4.68E-06"},"O-methyltransferase family protein.","AT4G16370","OPT3",1027.2,-0.58823,0.10739,-5.4773,{"v":4.32e-08,"d":"4.32E-08"},{"v":5e-07,"d":"5.00E-07"},"full_name=oligopeptide transporter. oligopeptide transporter. Encodes an oligopeptide transporter involved in metal homeostasis. It loads iron into the phloem, facilitates iron recirculation from the xylem to the phloem, and regulates both shoot-to-root iron signaling and iron redistribution from mature to developing tissues.","AT3G15990","SULTR3;4",151.75,-1.4455,0.22963,-6.2946,{"v":3.08e-10,"d":"3.08E-10"},{"v":3.46E-9,"d":"3.46E-09"},"full_name=sulfate transporter 3;4. sulfate transporter 3;4. Encodes sulfate transporter Sultr3;4.","AT3G19260","LOH2",70.829,-2.0304,0.27951,-7.2643,{"v":3.75e-13,"d":"3.75E-13"},{"v":4.07e-12,"d":"4.07E-12"},"full_name=LAG1 homologue 2. LAG1 homologue 2. LAG1 homolog . Loss of function mutant is sensitive to AAL-toxin. LOH2 is presumed to function in sphingolipid metabolism. It encodes a ceramide synthase essential for production of LCFA-ceramides (mainly C26).","AT2G32340",null,66.309,1.5868,0.28549,5.5582,{"v":2.73E-8,"d":"2.73E-08"},{"v":2.88e-07,"d":"2.88E-07"},"TraB family protein."]
["AT1G79700","WRI4",48.251,-1.6309,0.32227,-5.0606,{"v":4.18e-07,"d":"4.18E-07"},{"v":4.98e-06,"d":"4.98E-06"},"full_name=WRINKLED 4. Integrase-type DNA-binding superfamily protein.","AT2G28720",null,224.74,1.0872,0.19886,5.4672,{"v":4.57e-08,"d":"4.57E-08"},{"v":5.27e-07,"d":"5.27E-07"},"Histone superfamily protein.","AT2G26580","YAB5",58.299,-2.1272,0.33841,-6.2859,{"v":3.26e-10,"d":"3.26E-10"},{"v":3.64e-09,"d":"3.64E-09"},"full_name=YABBY5. plant-specific transcription factor YABBY family protein.","AT2G43210",null,489.46,0.77496,0.1069,7.2496,{"v":4.18e-13,"d":"4.18E-13"},{"v":4.52e-12,"d":"4.52E-12"},"Ubiquitin-like superfamily protein.","AT3G53230","AtCDC48B",1798.6,-0.40649,0.073316,-5.5444,{"v":2.95e-08,"d":"2.95E-08"},{"v":3.11e-07,"d":"3.11E-07"},"full_name=cell division cycle 48B. ATPase, AAA-type, CDC48 protein."]
["AT4G22235",null,89.566,-1.1529,0.22812,-5.0538,{"v":4.33e-07,"d":"4.33E-07"},{"v":5.14e-06,"d":"5.14E-06"},"defensin-like protein. Encodes a defensin-like (DEFL) family protein.","AT2G18950","HPT1",505.52,-0.63241,0.11602,-5.4509,{"v":5.01e-08,"d":"5.01E-08"},{"v":5.76e-07,"d":"5.76E-07"},"full_name=homogentisate phytyltransferase 1. homogentisate phytyltransferase 1. Encodes homogentisate phytyltransferase involved in tocopherol biosynthesis. Has impact on seed longevity and plays a role in the adaptation to low temperature stress, notably phloem loading.","AT4G23050",null,190.59,1.1226,0.17877,6.2794,{"v":3.4e-10,"d":"3.40E-10"},{"v":3.79e-09,"d":"3.79E-09"},"PAS domain-containing protein tyrosine kinase family protein.","AT5G18680","TLP11",275.66,1.025,0.14172,7.2324,4.74E-13,{"v":5.11e-12,"d":"5.11E-12"},"full_name=tubby like protein 11. tubby like protein 11. Member of TLP family","AT2G37290",null,145.05,-1.0425,0.18834,-5.5351,{"v":3.11e-08,"d":"3.11E-08"},{"v":3.26e-07,"d":"3.26E-07"},"Ypt/Rab-GAP domain of gyp1p superfamily protein."]
["AT5G62550",null,17.221,-5.6092,1.113,-5.0398,{"v":4.66e-07,"d":"4.66E-07"},{"v":5.51e-06,"d":"5.51E-06"},"microtubule-associated futsch-like protein.","AT5G64250",null,577.81,0.71604,0.13145,5.4472,{"v":5.12e-08,"d":"5.12E-08"},{"v":5.86e-07,"d":"5.86E-07"},"Aldolase-type TIM barrel family protein.","AT1G19330","AFR2",22.442,-7.7644,1.2378,-6.2726,{"v":3.55e-10,"d":"3.55E-10"},{"v":3.94E-9,"d":"3.94E-09"},"histone deacetylase complex subunit.","AT1G30620","MUR4",134.28,-1.5384,0.21301,-7.2219,{"v":5.12e-13,"d":"5.12E-13"},{"v":5.5e-12,"d":"5.50E-12"},"full_name=MURUS 4. NAD(P)-binding Rossmann-fold superfamily protein. encodes a type-II membrane protein that catalyzes 4-epimerization of UDP-D-Xylose to UDP-L-Arabinose in vitro, the nucleotide sugar used by glycosyltransferases in the arabinosylation of cell wall polysaccharides and wall-resident proteoglycans.","AT5G18630",null,658.79,-0.54242,0.098117,-5.5283,{"v":3.23e-08,"d":"3.23E-08"},{"v":3.38e-07,"d":"3.38E-07"},"alpha/beta-Hydrolases superfamily protein."]
["AT5G66460","MAN7",256.9,-0.76698,0.15239,-5.0331,{"v":4.83e-07,"d":"4.83E-07"},{"v":5.69e-06,"d":"5.69E-06"},"full_name=endo-beta-mannase 7. Glycosyl hydrolase superfamily protein. Encodes a endo-beta-mannanase involved in seed germination.","AT1G55690",null,780.48,-0.63705,0.11706,-5.4421,{"v":5.26e-08,"d":"5.26E-08"},{"v":6.01e-07,"d":"6.01E-07"},"Sec14p-like phosphatidylinositol transfer family protein.","AT1G08200","AXS2",1249.6,-0.59068,0.0943,-6.2638,{"v":3.76e-10,"d":"3.76E-10"},{"v":4.16e-09,"d":"4.16E-09"},"full_name=UDP-D-apiose/UDP-D-xylose synthase 2. UDP-D-apiose/UDP-D-xylose synthase 2. Encodes a putative UDP-D-apiose/UPD-D-xylose synthetase.","AT1G78570","RHM1",139.52,-1.4496,0.20103,-7.2107,{"v":5.57e-13,"d":"5.57E-13"},{"v":5.95e-12,"d":"5.95E-12"},"full_name=rhamnose biosynthesis 1. rhamnose biosynthesis 1. Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in <i>E. coli</i>.","AT1G19650",null,268.6,-0.79735,0.14435,-5.5239,{"v":3.32E-8,"d":"3.32E-08"},{"v":3.46E-7,"d":"3.46E-07"},"Sec14p-like phosphatidylinositol transfer family protein."]
["AT1G17860","ATKTI5",139.23,1.1548,0.22974,5.0265,{"v":5e-07,"d":"5.00E-07"},{"v":5.87e-06,"d":"5.87E-06"},"Kunitz family trypsin and protease inhibitor protein.","AT4G22300","SOBER1",67.829,-1.4315,0.26347,-5.433,{"v":5.54E-8,"d":"5.54E-08"},{"v":6.3E-7,"d":"6.30E-07"},"full_name=SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1. carboxylesterase. encodes a carboxylesterase that inhibits AvrBsT-triggered phenotypes in Arabidopsis","AT5G14370",null,37.131,-2.7077,0.43294,-6.2542,{"v":4e-10,"d":"4.00E-10"},{"v":4.41e-09,"d":"4.41E-09"},"CCT motif family protein.","AT5G58730","Mik",147.17,-1.3799,0.1917,-7.1985,{"v":6.09e-13,"d":"6.09E-13"},6.49E-12,"full_name=myo-inositol kinase. pfkB-like carbohydrate kinase family protein.","AT1G47970",null,2181.7,-0.53904,0.097978,-5.5017,{"v":3.76e-08,"d":"3.76E-08"},{"v":3.91e-07,"d":"3.91E-07"},"nucleolin."]
["AT4G24620","PGI1",1099.2,-0.65615,0.13058,-5.025,{"v":5.04e-07,"d":"5.04E-07"},{"v":5.91e-06,"d":"5.91E-06"},"full_name=phosphoglucose isomerase 1. phosphoglucose isomerase 1. The PGI1 gene encodes the plastid phospho-glucose (Glc) isomerase. While pgi1-1 mutant has a deficiency in leaf starch synthesis, it accumulates starch in root cap cells. Flowering time of the pgi1-1 mutant is significantly delayed under short-day conditions.","AT2G39705","RTFL8",100.12,-1.163,0.21426,-5.428,{"v":5.7e-08,"d":"5.70E-08"},{"v":6.48e-07,"d":"6.48E-07"},"full_name=ROTUNDIFOLIA like 8. ROTUNDIFOLIA like 8.","AT3G13020",null,30.089,2.7244,0.43573,6.2525,4.04E-10,{"v":4.45e-09,"d":"4.45E-09"},"hAT transposon superfamily protein.","AT1G80940",null,534.56,-0.74855,0.10404,-7.195,{"v":6.25e-13,"d":"6.25E-13"},{"v":6.65e-12,"d":"6.65E-12"},"Snf1 kinase interactor-like protein.","AT2G28800","ALB3",1487.6,0.43026,0.078229,5.5,{"v":3.8e-08,"d":"3.80E-08"},{"v":3.94e-07,"d":"3.94E-07"},"full_name=ALBINO 3. 63 kDa inner membrane family protein. member of Chloroplast membrane protein ALBINO3 family. Similar to pea PPF1 and may play a role in plant senescence."]
["AT1G72450","JAZ6",70.625,1.3693,0.27292,5.0172,{"v":5.24e-07,"d":"5.24E-07"},{"v":6.13e-06,"d":"6.13E-06"},"full_name=jasmonate-zim-domain protein 6. jasmonate-zim-domain protein 6. JAZ6 transcript levels rise in response to a jasmonate stimulus and a GFP:JAZ6 fusion protein localizes to the nucleus. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ6:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation.","AT1G06040","STO",441.85,-0.65131,0.12025,-5.4163,{"v":6.09e-08,"d":"6.09E-08"},{"v":6.89e-07,"d":"6.89E-07"},"full_name=SALT TOLERANCE. B-box zinc finger family protein. Encodes salt tolerance protein (STO) which confers salt tolerance to yeast cells. Fully complements calcineurin deficient yeast but does not encode a phosphoprotein phosphatase. Sequence has similarities to CONSTANS. STO co-localizes with COP1 and plays a role in light signaling.","AT1G51310",null,155.49,1.1433,0.18305,6.2458,{"v":4.22e-10,"d":"4.22E-10"},{"v":4.63e-09,"d":"4.63E-09"},"tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase.","AT5G65280","GCL1",297.62,-1.0015,0.13941,-7.1833,{"v":6.8e-13,"d":"6.80E-13"},{"v":7.21e-12,"d":"7.21E-12"},"full_name=GCR2-like 1. GCR2-like 1. Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor. Loss of function mutations in GCL1 show no ABA response defects based on assays of seed germination and seedling development.GCL1 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase.","AT4G31040","DLDG1",128.5,1.1002,0.2003,5.4926,{"v":3.96e-08,"d":"3.96E-08"},{"v":4.09e-07,"d":"4.09E-07"},"CemA-like proton extrusion protein-like protein."]
["AT1G80540",null,118.41,-1.0629,0.21226,-5.0077,{"v":5.51E-7,"d":"5.51E-07"},{"v":6.41e-06,"d":"6.41E-06"},"envelope glycoprotein B.","AT5G56590",null,102,-1.2356,0.22896,-5.3968,{"v":6.79e-08,"d":"6.79E-08"},{"v":7.65e-07,"d":"7.65E-07"},"O-Glycosyl hydrolases family 17 protein.","AT3G57080","NRPE5",134.36,-1.5258,0.24506,-6.2263,4.78E-10,{"v":5.22e-09,"d":"5.22E-09"},"Eukaryotic rpb5 RNA polymerase subunit family protein. Non-catalytic subunit unique to Nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB5.","AT2G03980",null,31.379,-4.4819,0.6252,-7.1687,{"v":7.57e-13,"d":"7.57E-13"},{"v":8e-12,"d":"8.00E-12"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT4G21680","NRT1.8",7780.6,0.44397,0.080954,5.4843,{"v":4.15e-08,"d":"4.15E-08"},{"v":4.28e-07,"d":"4.28E-07"},"full_name=NITRATE TRANSPORTER 1.8. NITRATE TRANSPORTER 1.8. Encodes a nitrate transporter (NRT1.8). Functions in nitrate removal from the xylem sap. Mediates cadmium tolerance."]
["AT5G66230",null,9.0999,-6.5703,1.3142,-4.9995,{"v":5.75E-7,"d":"5.75E-07"},{"v":6.67e-06,"d":"6.67E-06"},"Chalcone-flavanone isomerase family protein.","AT1G35513",null,45.133,-1.7378,0.32227,-5.3922,{"v":6.96e-08,"d":"6.96E-08"},{"v":7.83e-07,"d":"7.83E-07"},"pseudogene. pseudogene of isochorismate synthase-related / isochorismate mutase-related","AT1G17870","EGY3",274.28,1.1404,0.1833,6.2213,{"v":4.93e-10,"d":"4.93E-10"},{"v":5.37e-09,"d":"5.37E-09"},"full_name=ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 3. ethylene-dependent gravitropism-deficient and yellow-green-like 3. S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442%E2%80%93454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171%E2%80%93179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria.","AT1G49450","AIW2",38.332,-8.8727,1.2423,-7.1422,{"v":9.19e-13,"d":"9.19E-13"},{"v":9.68e-12,"d":"9.68E-12"},"Transducin/WD40 repeat-like superfamily protein.","AT2G03470",null,271.44,0.82609,0.15087,5.4756,{"v":4.36E-8,"d":"4.36E-08"},{"v":4.48e-07,"d":"4.48E-07"},"ELM2 domain-containing protein."]
["AT2G16595",null,352.24,0.6468,0.12946,4.9963,{"v":5.84e-07,"d":"5.84E-07"},{"v":6.76e-06,"d":"6.76E-06"},"Translocon-associated protein (TRAP), alpha subunit.","AT5G10480","PAS2",614.92,-0.58172,0.10795,-5.3887,{"v":7.1E-8,"d":"7.10E-08"},{"v":7.95e-07,"d":"7.95E-07"},"full_name=PASTICCINO 2. Protein-tyrosine phosphatase-like, PTPLA. Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA;1 only in its phosphorylated form, preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. Based on complementation of yeast mutant PAS2 has acyl-CoA dehydratase activity. It interacts with CER10, a component of the microsomal fatty acid elongase complex, suggesting a role in synthesis of VLCFAs (very long chain fatty acids).","AT1G06400","ARA-2",569.45,0.77366,0.12471,6.2038,{"v":5.51e-10,"d":"5.51E-10"},{"v":5.98e-09,"d":"5.98E-09"},"Ras-related small GTP-binding family protein. small GTP-binding protein (ara-2)","AT1G71000",null,36.194,3.5144,0.4932,7.1256,1.04E-12,{"v":1.09e-11,"d":"1.09E-11"},"Chaperone DnaJ-domain superfamily protein.","AT2G47820",null,222.74,0.81256,0.14868,5.465,{"v":4.63e-08,"d":"4.63E-08"},{"v":4.73e-07,"d":"4.73E-07"},"arginine-glutamic acid dipeptide repeat protein."]
["AT1G15100","RHA2A",258.14,0.88335,0.177,4.9908,{"v":6.01e-07,"d":"6.01E-07"},{"v":6.94e-06,"d":"6.94E-06"},"full_name=RING-H2 finger A2A. RING-H2 finger A2A. Encodes a putative RING-H2 finger protein RHA2a.","AT5G49650","XK-2",404.79,-0.65546,0.12174,-5.3843,{"v":7.27e-08,"d":"7.27E-08"},{"v":8.13e-07,"d":"8.13E-07"},"full_name=xylulose kinase-2. xylulose kinase-2. Encodes a cytosolic protein capable of phosphorylating xylulose and deoxy-xylulose. It most likely plays a role in producing precursors for isoprenoid biosynthesis.","AT4G39850","ABCD1",1073.3,0.7868,0.12692,6.1992,5.68E-10,{"v":6.15e-09,"d":"6.15E-09"},"full_name=ATP-binding cassette D1. peroxisomal ABC transporter 1. Encodes a peroxisomal protein of the ATP binding cassette (ABC) transporter class (PMP subfamily) with significant identity to the human X-linked adrenoleukodystrophy protein (ALDP). The gene product promotes germination and represses embryo dormancy. ABI3, ABA1, FUS3 and LEC1 are epistatic to this gene. Mutants accumulate fatty acyl CoA suggesting a defect in uptake of fatty acyl CoA into the peroxisome.","AT3G21300","TRM2A",54.807,2.2409,0.31463,7.1223,{"v":1.06e-12,"d":"1.06E-12"},{"v":1.11e-11,"d":"1.11E-11"},"RNA methyltransferase family protein.","AT1G14640",null,78.385,-1.3383,0.24511,-5.46,{"v":4.76e-08,"d":"4.76E-08"},{"v":4.86e-07,"d":"4.86E-07"},"SWAP (Suppressor-of-White-APricot)/surp domain-containing protein."]
["AT3G44550","FAR5",57.352,-1.5362,0.30952,-4.9631,{"v":6.94e-07,"d":"6.94E-07"},{"v":7.96E-6,"d":"7.96E-06"},"full_name=fatty acid reductase 5. fatty acid reductase 5. Encodes a member of the eight-member gene family encoding alcohol-forming fatty acyl-CoA reductases (FARs) identified in Arabidopsis thaliana. Three of the FARs, FAR1 (At5g22500), FAR4 (At3g44540) and FAR5 (At3g44550), are shown to generate the fatty alcohols found in root, seed coat, and wound-induced leaf tissue.","AT1G05160","CYP88A3",564.34,-0.60582,0.11282,-5.3696,{"v":7.89e-08,"d":"7.89E-08"},{"v":8.77e-07,"d":"8.77E-07"},"full_name=cytochrome P450, family 88, subfamily A, polypeptide 3. cytochrome P450, family 88, subfamily A, polypeptide 3. Encodes an ent-kaurenoic acid hydroxylase, a member of the CYP88A cytochrome p450 family.","AT3G26932","DRB3",145.78,-1.3906,0.22478,-6.1865,{"v":6.15e-10,"d":"6.15E-10"},{"v":6.63e-09,"d":"6.63E-09"},"full_name=dsRNA-binding protein 3. dsRNA-binding protein 3.","AT1G62220",null,36.275,-4.7317,0.66644,-7.1,{"v":1.25e-12,"d":"1.25E-12"},{"v":1.3E-11,"d":"1.30E-11"},"transmembrane protein.","AT5G49220",null,149.81,1.0112,0.18587,5.4402,{"v":5.32E-8,"d":"5.32E-08"},{"v":5.4e-07,"d":"5.40E-07"},"hypothetical protein (DUF789)."]
["AT2G38700","MVD1",368.84,-0.67017,0.13521,-4.9566,{"v":7.17e-07,"d":"7.17E-07"},{"v":8.21e-06,"d":"8.21E-06"},"full_name=mevalonate diphosphate decarboxylase 1. mevalonate diphosphate decarboxylase 1. Encodes mevalonate diphosphate decarboxylase, the enzyme that catalyzes the synthesis of isopentenyl diphosphate, used in sterol and isoprenoid biosynthesis. The protein appears to form a homodimeric complex. Incidentally, it was shown that the Arabidopsis MVD protein could also interact with its yeast homolog to form a heterodimer.","AT2G30860","GSTF9",457.47,0.6721,0.12562,5.3503,{"v":8.78e-08,"d":"8.78E-08"},{"v":9.73e-07,"d":"9.73E-07"},"full_name=glutathione S-transferase PHI 9. glutathione S-transferase PHI 9. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).","AT3G60300",null,394.8,0.81314,0.13158,6.1798,{"v":6.42e-10,"d":"6.42E-10"},{"v":6.9e-09,"d":"6.90E-09"},"RWD domain-containing protein.","AT2G05830","MTI1",278.98,1.1021,0.15541,7.0918,1.32E-12,1.37E-11,"NagB/RpiA/CoA transferase-like superfamily protein. Encodes a 5-methylthioribose-1-phosphate isomerase.","AT5G65890","ACR1",569.04,-0.55864,0.10286,-5.4309,{"v":5.61e-08,"d":"5.61E-08"},{"v":5.68E-7,"d":"5.68E-07"},"full_name=ACT domain repeat 1. ACT domain repeat 1. Member of ACT domain containing protein family. ACT domains are amino acid binding domains. Shows strongest expression in flowers and siliques."]
["AT5G54870",null,751.4,0.5307,0.10723,4.9492,{"v":7.45e-07,"d":"7.45E-07"},{"v":8.5e-06,"d":"8.50E-06"},"inositol-1,4,5-trisphosphate 5-phosphatase.","AT5G44560","VPS2.2",98.533,-1.1659,0.21802,-5.3477,{"v":8.91e-08,"d":"8.91E-08"},{"v":9.84e-07,"d":"9.84E-07"},"SNF7 family protein.","AT4G01037","WTF1",132.71,1.1796,0.19127,6.167,{"v":6.96e-10,"d":"6.96E-10"},{"v":7.45e-09,"d":"7.45E-09"},"full_name=what's this factor?. Ubiquitin carboxyl-terminal hydrolase family protein.","AT1G45230",null,224.57,1.2104,0.17092,7.0821,1.42E-12,{"v":1.47e-11,"d":"1.47E-11"},"DCL protein (DUF3223).","AT1G77410","BGAL16",42.742,-2.0811,0.38353,-5.4262,{"v":5.76E-8,"d":"5.76E-08"},{"v":5.81e-07,"d":"5.81E-07"},"full_name=beta-galactosidase 16. beta-galactosidase 16."]
["AT4G23250","EMB1290",24.373,2.6838,0.54327,4.9401,{"v":7.81e-07,"d":"7.81E-07"},{"v":8.87e-06,"d":"8.87E-06"},"full_name=EMBRYO DEFECTIVE 1290. cysteine-rich receptor-like protein kinase 17.","AT3G08680",null,231.27,-0.90831,0.17014,-5.3387,{"v":9.36e-08,"d":"9.36E-08"},{"v":1.03e-06,"d":"1.03E-06"},"Leucine-rich repeat protein kinase family protein.","AT1G30440",null,94.219,-1.4433,0.23416,-6.1637,{"v":7.11e-10,"d":"7.11E-10"},{"v":7.58e-09,"d":"7.58E-09"},"Phototropic-responsive NPH3 family protein.","AT5G01590","TIC56",80.376,2.0186,0.28544,7.0718,{"v":1.53e-12,"d":"1.53E-12"},1.58E-11,"histone-lysine N-methyltransferase ATXR3-like protein.","AT1G08230",null,156.44,1.0778,0.19907,5.414,{"v":6.16e-08,"d":"6.16E-08"},{"v":6.19e-07,"d":"6.19E-07"},"Transmembrane amino acid transporter family protein. Codes for a H+-driven, high affinity gamma-aminobutyric acid (GABA) transporter. Localized at the plasma membrane. In planta, AtGAT1 expression was highest in flowers and under conditions of elevated GABA concentrations such as wounding or senescence."]
["AT3G20210","DELTA-VPE",1448.1,-0.73568,0.1491,-4.9342,{"v":8.05e-07,"d":"8.05E-07"},{"v":9.11e-06,"d":"9.11E-06"},"full_name=delta vacuolar processing enzyme. delta vacuolar processing enzyme. Encodes a vacuolar processing enzyme with caspase-1-like activity that is specifically expressed in inner integument of developing seeds. Mutants display abnormal seed coat development. It is speculated to be involved in cell death of limited cell layers, the purpose of which is to form a seed coat.","AT1G06490","CalS7",26.569,-2.3701,0.44437,-5.3336,{"v":9.63e-08,"d":"9.63E-08"},{"v":1.06E-6,"d":"1.06E-06"},"full_name=callose synthase 7. glucan synthase-like 7. Encodes Callose Synthase 7 (CalS7), a phloem-specific callose synthase responsible for callose deposition in developing sieve elements during phloem formation and in mature phloem induced by wounding.","AT4G10040","CYTC-2",455.64,0.74873,0.12173,6.1508,{"v":7.71e-10,"d":"7.71E-10"},{"v":8.2e-09,"d":"8.20E-09"},"full_name=cytochrome c-2. cytochrome c-2. Encodes cytochrome c. Promoter directs preferential expression in vascular tissues of cotyledons, leaves, roots, and hypocotyls, and in anthers.","AT3G18390","EMB1865",274.3,0.98429,0.13936,7.0629,{"v":1.63e-12,"d":"1.63E-12"},1.68E-11,"full_name=embryo defective 1865. CRS1 / YhbY (CRM) domain-containing protein.","AT5G02870","RPL4",1118.3,0.48048,0.08884,5.4084,{"v":6.36E-8,"d":"6.36E-08"},{"v":6.37E-7,"d":"6.37E-07"},"Ribosomal protein L4/L1 family."]
["AT4G36195",null,1688.5,0.50863,0.10313,4.9322,{"v":8.13e-07,"d":"8.13E-07"},{"v":9.19e-06,"d":"9.19E-06"},"Serine carboxypeptidase S28 family protein.","AT2G29340",null,105.29,-1.1581,0.21732,-5.3289,{"v":9.88e-08,"d":"9.88E-08"},{"v":1.08E-6,"d":"1.08E-06"},"NAD-dependent epimerase/dehydratase family protein.","AT1G48620","HON5",647.01,0.71939,0.11703,6.1472,{"v":7.89e-10,"d":"7.89E-10"},{"v":8.37e-09,"d":"8.37E-09"},"full_name=high mobility group A5. high mobility group A5. This gene is predicted to encodes a histone H1/H5 family member. A plant line expressing an RNAi construct targeted against HON5 shows a reduced level of agrobacterium-mediated root transformation.","AT1G01960","EDA10",405.53,0.83422,0.11818,7.059,{"v":1.68e-12,"d":"1.68E-12"},{"v":1.72e-11,"d":"1.72E-11"},"full_name=embryo sac development arrest 10. SEC7-like guanine nucleotide exchange family protein.","AT2G22780","PMDH1",2126.4,0.47927,0.088626,5.4077,{"v":6.38e-08,"d":"6.38E-08"},{"v":6.38e-07,"d":"6.38E-07"},"full_name=peroxisomal NAD-malate dehydrogenase 1. peroxisomal NAD-malate dehydrogenase 1. encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA."]
["AT1G03230","SAP1",41.995,-1.678,0.34055,-4.9273,{"v":8.34e-07,"d":"8.34E-07"},{"v":9.4e-06,"d":"9.40E-06"},"Eukaryotic aspartyl protease family protein.","AT5G51740","OMA1",408.98,0.79603,0.14952,5.324,{"v":1.01E-7,"d":"1.01E-07"},{"v":1.11E-6,"d":"1.11E-06"},"Peptidase family M48 family protein.","AT2G27810","NAT12",154.8,-1.1299,0.18403,-6.1399,{"v":8.25e-10,"d":"8.25E-10"},{"v":8.74e-09,"d":"8.74E-09"},"full_name=nucleobase-ascorbate transporter 12. nucleobase-ascorbate transporter 12. Encodes a plasma-membrane localized nucleobase transporter capable of transporting adenine, guanine, uracil and hypoxanthine. Likely to be a proton-nucleobase symporter.","AT1G12520","CCS",430.51,1.3546,0.19215,7.0498,1.79E-12,{"v":1.83e-11,"d":"1.83E-11"},"full_name=copper chaperone for SOD1. copper chaperone for SOD1. Copper-zinc superoxide dismutase copper chaperone (delivers copper to the Cu-Zn superoxide dismutase). Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments. Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta.","AT4G15380","CYP705A4",241.37,-0.87243,0.16142,-5.4046,{"v":6.49e-08,"d":"6.49E-08"},{"v":6.48e-07,"d":"6.48E-07"},"full_name=cytochrome P450, family 705, subfamily A, polypeptide 4. cytochrome P450, family 705, subfamily A, polypeptide 4. member of CYP705A"]
["AT3G60220","ATL4",230.04,-0.77592,0.15761,-4.9232,{"v":8.51e-07,"d":"8.51E-07"},{"v":9.57e-06,"d":"9.57E-06"},"full_name=TOXICOS EN LEVADURA 4. TOXICOS EN LEVADURA 4. Encodes a putative RING-H2 zinc finger protein ATL4 (ATL4).","AT1G54500",null,56.513,-1.5163,0.28543,-5.3124,{"v":1.08E-7,"d":"1.08E-07"},{"v":1.18e-06,"d":"1.18E-06"},"Rubredoxin-like superfamily protein.","AT4G10690",null,484.59,0.89458,0.14587,6.1325,{"v":8.65e-10,"d":"8.65E-10"},{"v":9.13e-09,"d":"9.13E-09"},"transposable_element_gene.","AT5G13650","SVR3",506.49,0.78516,0.11164,7.0331,{"v":2.02e-12,"d":"2.02E-12"},{"v":2.06e-11,"d":"2.06E-11"},"full_name=SUPPRESSOR OF VARIEGATION 3. elongation factor family protein. Encodes SVR3, a putative chloroplast TypA translation elongation GTPase. Loss of SVR3 suppresses variegation mediated by var2. SVR3 is essential for plants%E2%80%99 ability to develop functional chloroplasts under chilling stress (8C), but not at normal temperature (22C).","AT1G27500","KLCR3",133.04,1.0574,0.19575,5.4019,{"v":6.59e-08,"d":"6.59E-08"},{"v":6.56e-07,"d":"6.56E-07"},"full_name=kinesin light chain-related 3. Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT5G49730","FRO6",133.37,-1.1639,0.23663,-4.9185,{"v":8.72e-07,"d":"8.72E-07"},{"v":9.76e-06,"d":"9.76E-06"},"full_name=ferric reduction oxidase 6. ferric reduction oxidase 6. Encodes a plasma membrane-located ferric chelate reductase. Its mRNA is expressed in green aerial tissues (shoot, flower and cotyledon) in a light- and cell differentiation-specific manner.","AT2G46660","CYP78A6",43.613,1.7771,0.33492,5.3061,{"v":1.12E-7,"d":"1.12E-07"},{"v":1.21e-06,"d":"1.21E-06"},"full_name=cytochrome P450, family 78, subfamily A, polypeptide 6. cytochrome P450, family 78, subfamily A, polypeptide 6. Encodes a member of CYP78A cytochrome P450 monooxygenase protein family that is required in the sporophytic tissue of the mother plant to promote seed growth.","AT2G34770","FAH1",478.93,0.87074,0.14221,6.1231,{"v":9.18e-10,"d":"9.18E-10"},{"v":9.65e-09,"d":"9.65E-09"},"full_name=fatty acid hydroxylase 1. fatty acid hydroxylase 1. encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death.","AT1G56720",null,40.958,-3.0361,0.43238,-7.0217,{"v":2.19e-12,"d":"2.19E-12"},2.23E-11,"Protein kinase superfamily protein.","AT3G59840",null,248.94,-0.81416,0.15099,-5.3921,{"v":6.96e-08,"d":"6.96E-08"},{"v":6.9e-07,"d":"6.90E-07"},"allyl alcohol dehydrogenase-like protein."]
["AT3G49670","BAM2",23.312,-2.4494,0.49886,-4.9099,{"v":9.11e-07,"d":"9.11E-07"},{"v":1.02e-05,"d":"1.02E-05"},"full_name=BARELY ANY MERISTEM 2. Leucine-rich receptor-like protein kinase family protein. Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM1,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM2 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.","AT1G69410","ELF5A-3",3870.7,0.52377,0.098955,5.293,{"v":1.2e-07,"d":"1.20E-07"},{"v":1.3E-6,"d":"1.30E-06"},"full_name=eukaryotic elongation factor 5A-3. eukaryotic elongation factor 5A-3. Encodes eIF5A-2, a putative eukaryotic translation initiation factor. There are three eIF5A coding genes in Arabidopsis: eIF5A-1/At1g13950, eIF5A-2/At1g26630 and eIF5A-3/At1g69410.","AT5G48850","ATSDI1",1627.3,1.2568,0.20589,6.1046,{"v":1.03E-9,"d":"1.03E-09"},{"v":1.08e-08,"d":"1.08E-08"},"full_name=SULPHUR DEFICIENCY-INDUCED 1. Tetratricopeptide repeat (TPR)-like superfamily protein. homologous to the wheat sulphate deficiency-induced gene sdi1. Expression in root and leaf is induced by sulfur starvation. Knockout mutants retained higher root and leaf sulfate concentrations, indicating a role in regulation of stored sulfate pools.","AT5G52882",null,273.11,-5.0883,0.7256,-7.0125,{"v":2.34e-12,"d":"2.34E-12"},2.37E-11,"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT5G60870","RUG3",203.6,-0.85912,0.15944,-5.3884,{"v":7.11e-08,"d":"7.11E-08"},{"v":7.02e-07,"d":"7.02E-07"},"full_name=RCC1/UVR8/GEF-like 3. Regulator of chromosome condensation (RCC1) family protein. Encodes a mitochondrial protein RUG3 that is required for accumulation of mitochondrial respiratory chain complex I. RUG3 is related to human REGULATOR OF CHROMOSOME CONDENSATION 1 (RCC1) and Arabidopsis UV-B RESISTANCE 8 (UVR8)."]
["AT1G71340","GDPD4",837.41,0.77102,0.15724,4.9034,{"v":9.42e-07,"d":"9.42E-07"},{"v":1.05e-05,"d":"1.05E-05"},"full_name=glycerophosphodiester phosphodiesterase 4. PLC-like phosphodiesterases superfamily protein. Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family.","AT4G20320","CTPS4",289.42,-1.1599,0.21954,-5.2831,{"v":1.27e-07,"d":"1.27E-07"},{"v":1.37E-6,"d":"1.37E-06"},"CTP synthase family protein.","AT4G39150",null,94.485,-1.3716,0.22479,-6.1015,{"v":1.05e-09,"d":"1.05E-09"},{"v":1.1e-08,"d":"1.10E-08"},"DNAJ heat shock N-terminal domain-containing protein.","AT5G59990",null,32.002,-8.6064,1.2296,-6.9996,{"v":2.57e-12,"d":"2.57E-12"},{"v":2.59e-11,"d":"2.59E-11"},"CCT motif family protein.","AT4G18700","CIPK12",891.4,0.4521,0.084072,5.3776,{"v":7.55e-08,"d":"7.55E-08"},{"v":7.43e-07,"d":"7.43E-07"},"full_name=CBL-interacting protein kinase 12. CBL-interacting protein kinase 12. Encodes CBL-interacting protein kinase 12 (CIPK12)."]
["AT2G42170",null,863.01,0.86667,0.17693,4.8984,{"v":9.66e-07,"d":"9.66E-07"},{"v":1.07e-05,"d":"1.07E-05"},"Actin family protein.","AT1G06645",null,235.63,0.78923,0.14959,5.2759,{"v":1.32e-07,"d":"1.32E-07"},{"v":1.42E-6,"d":"1.42E-06"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT5G16510","RGP5",147.34,-1.1899,0.19521,-6.0956,{"v":1.09E-9,"d":"1.09E-09"},{"v":1.14E-8,"d":"1.14E-08"},"full_name=reversibly glycosylated polypeptide 5. Alpha-1,4-glucan-protein synthase family protein. RGP5 is a member of the reversably-glycosylated family of proteins. Analyses using tagged RGP5 suggest that it is present in the cytosol and in association with the Golgi apparatus. Recombinant RGP5 does not have UDP-arabinose mutase activity based on an in vitro assay even though the related RGP1, RGP2, and RGP3 proteins do have activity in the same assay. RGP5 can form complexes with RGP1 and RGP2.","AT1G63380",null,46.11,-2.325,0.3329,-6.984,{"v":2.87e-12,"d":"2.87E-12"},{"v":2.89e-11,"d":"2.89E-11"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT1G03070","LFG4",35.593,-2.0815,0.38766,-5.3695,{"v":7.9e-08,"d":"7.90E-08"},{"v":7.75e-07,"d":"7.75E-07"},"Bax inhibitor-1 family protein."]
["AT4G01120","GBF2",389.27,0.6176,0.12629,4.8903,{"v":1.01e-06,"d":"1.01E-06"},{"v":1.11E-5,"d":"1.11E-05"},"full_name=G-box binding factor 2. G-box binding factor 2. bZIP (basic leucine zipper) transcription factor that binds to the G-box regulatory element found in many plant promoters. GBF2 nuclear localization is increased by blue light","AT2G39190","ATATH8",186.29,-0.85749,0.16283,-5.266,{"v":1.39e-07,"d":"1.39E-07"},{"v":1.49e-06,"d":"1.49E-06"},"Protein kinase superfamily protein. member of ATH subfamily","AT2G30350","HIGLE",146.11,1.1509,0.18901,6.0893,{"v":1.13E-9,"d":"1.13E-09"},{"v":1.18E-8,"d":"1.18E-08"},"Excinuclease ABC, C subunit, N-terminal.","AT3G18980","ETP1",157.88,1.3083,0.18774,6.9687,{"v":3.2e-12,"d":"3.20E-12"},{"v":3.21e-11,"d":"3.21E-11"},"full_name=EIN2 targeting protein1. EIN2 targeting protein1.","AT1G53100",null,11.82,-7.174,1.3386,-5.3595,{"v":8.35E-8,"d":"8.35E-08"},{"v":8.16E-7,"d":"8.16E-07"},"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein."]
["AT1G25310","MEE8",26.961,2.7176,0.55743,4.8753,{"v":1.09e-06,"d":"1.09E-06"},{"v":1.2E-5,"d":"1.20E-05"},"full_name=maternal effect embryo arrest 8. basic helix-loop-helix (bHLH) DNA-binding family protein.","AT2G24630","ATCSLC08",38.904,-1.8898,0.35907,-5.2629,{"v":1.42E-7,"d":"1.42E-07"},{"v":1.51e-06,"d":"1.51E-06"},"Glycosyl transferase family 2 protein. encodes a gene similar to cellulose synthase","AT1G19850","MP",187.72,-1.2255,0.20159,-6.0793,{"v":1.21E-9,"d":"1.21E-09"},{"v":1.25e-08,"d":"1.25E-08"},"full_name=MONOPTEROS. Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-like protein. Encodes a transcription factor (IAA24) mediating embryo axis formation and vascular development. Similar to AUXIN RESPONSIVE FACTOR 1 (ARF1) shown to bind to auxin responsive elements (AREs), and to the maize transcriptional activator VIVIPAROUS 1( VP1). In situ hybridization shows expression in provascular tissue of embryos, the emerging shoot primordia, then is restricted to provascular tissue, and in the root central vascular cylinder.","AT4G10080",null,661.45,0.68456,0.098395,6.9572,3.47E-12,3.47E-11,"transmembrane protein.","AT5G04430","BTR1L",1226.7,0.40348,0.075483,5.3453,{"v":9.03e-08,"d":"9.03E-08"},{"v":8.79e-07,"d":"8.79E-07"},"full_name=binding to TOMV RNA 1L (long form). binding to TOMV RNA 1L (long form). Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication."]
["AT5G44480","DUR",16.852,-3.2873,0.67487,-4.871,{"v":1.11E-6,"d":"1.11E-06"},{"v":1.22E-5,"d":"1.22E-05"},"full_name=DEFECTIVE UGE IN ROOT. NAD(P)-binding Rossmann-fold superfamily protein. mutant has Altered lateral root; UDP Glucose Epimerase","AT5G67280","RLK",132.45,-1.0622,0.2025,-5.2457,{"v":1.56e-07,"d":"1.56E-07"},{"v":1.65e-06,"d":"1.65E-06"},"full_name=receptor-like kinase. receptor-like kinase.","AT3G19900",null,379.75,0.92697,0.15267,6.0716,{"v":1.27E-9,"d":"1.27E-09"},{"v":1.3e-08,"d":"1.30E-08"},"hypothetical protein.","AT4G01020",null,235.33,1.0219,0.14703,6.9505,{"v":3.64e-12,"d":"3.64E-12"},{"v":3.62e-11,"d":"3.62E-11"},"helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein.","AT4G15545","NAIP1",284.46,-0.71554,0.13408,-5.3367,{"v":9.47e-08,"d":"9.47E-08"},{"v":9.19e-07,"d":"9.19E-07"},"PH-response transcription factor."]
["AT5G48810","CB5-D",642.9,-0.58922,0.12122,-4.8609,{"v":1.17E-6,"d":"1.17E-06"},{"v":1.28e-05,"d":"1.28E-05"},"full_name=cytochrome B5 isoform D. cytochrome B5 isoform D. Encodes a cytochrome b5 isoform that localizes to the ER. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro and the protein appears to be subject to glycosylation.","AT5G47380",null,25.741,-2.5176,0.48021,-5.2428,{"v":1.58e-07,"d":"1.58E-07"},{"v":1.68E-6,"d":"1.68E-06"},"electron transporter, putative (Protein of unknown function, DUF547).","AT3G14590","NTMC2T6.2",1183.6,0.90869,0.14974,6.0686,{"v":1.29e-09,"d":"1.29E-09"},{"v":1.33E-8,"d":"1.33E-08"},"Calcium-dependent lipid-binding (CaLB domain) family protein.","AT3G16910","AAE7",423.55,0.87342,0.12597,6.9337,{"v":4.1e-12,"d":"4.10E-12"},{"v":4.07e-11,"d":"4.07E-11"},"full_name=acyl-activating enzyme 7. acyl-activating enzyme 7. Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle.","AT3G03890",null,485.72,-0.64454,0.12095,-5.3291,{"v":9.87e-08,"d":"9.87E-08"},{"v":9.55e-07,"d":"9.55E-07"},"FMN binding protein."]
["AT3G01810",null,517.07,-0.60716,0.12503,-4.8563,{"v":1.2e-06,"d":"1.20E-06"},{"v":1.3e-05,"d":"1.30E-05"},"EEIG1/EHBP1 protein amino-terminal domain protein.","AT2G40640",null,60.276,-1.4764,0.28189,-5.2374,{"v":1.63e-07,"d":"1.63E-07"},{"v":1.72E-6,"d":"1.72E-06"},"RING/U-box superfamily protein.","AT1G64530","NLP6",34.138,-2.4221,0.39983,-6.0577,{"v":1.38E-9,"d":"1.38E-09"},{"v":1.41e-08,"d":"1.41E-08"},"Plant regulator RWP-RK family protein.","AT5G05340","PRX52",27.238,-4.6383,0.67014,-6.9214,{"v":4.47e-12,"d":"4.47E-12"},4.42E-11,"full_name=peroxidase 52. Peroxidase superfamily protein. Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes.","AT1G11930",null,803.34,-0.5711,0.10743,-5.316,{"v":1.06E-7,"d":"1.06E-07"},{"v":1.02E-6,"d":"1.02E-06"},"Putative pyridoxal phosphate-dependent enzyme, YBL036C type."]
["AT5G24820",null,8.3529,-6.4505,1.3294,-4.8522,{"v":1.22E-6,"d":"1.22E-06"},{"v":1.33E-5,"d":"1.33E-05"},"Eukaryotic aspartyl protease family protein.","AT2G47450","CAO",16.199,-4.9152,0.94021,-5.2277,{"v":1.72E-7,"d":"1.72E-07"},{"v":1.81E-6,"d":"1.81E-06"},"full_name=CHAOS. chloroplast signal recognition particle component (CAO). A component of the chloroplast signal recognition particle pathway that is involved in LHCP targeting. It is downregulated in response to high light. It recognizes the DPLG motif in Lhcb1.","AT5G61460","MIM",218.74,1.0371,0.1716,6.0435,{"v":1.51E-9,"d":"1.51E-09"},{"v":1.54e-08,"d":"1.54E-08"},"full_name=hypersensitive to MMS, irradiation and MMC. P-loop containing nucleoside triphosphate hydrolases superfamily protein. Encodes SMC6B (STRUCTURAL MAINTENANCE OF CHROMOSOMES 6B), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.","AT1G48280","IPGAL2",118.55,-1.3508,0.19571,-6.9018,{"v":5.13e-12,"d":"5.13E-12"},{"v":5.06e-11,"d":"5.06E-11"},"hydroxyproline-rich glycoprotein family protein.","AT2G33520","ATHCYSTM7",1518.2,-0.42462,0.080133,-5.299,{"v":1.16e-07,"d":"1.16E-07"},{"v":1.12e-06,"d":"1.12E-06"},"cysteine-rich/transmembrane domain protein A."]
["AT2G26760","CYCB1;4",14.078,-3.9499,0.81445,-4.8498,{"v":1.24E-6,"d":"1.24E-06"},{"v":1.34E-5,"d":"1.34E-05"},"full_name=Cyclin B1;4. Cyclin B1;4.","AT3G15630",null,171.78,-1.4303,0.27386,-5.2227,{"v":1.76e-07,"d":"1.76E-07"},{"v":1.85e-06,"d":"1.85E-06"},"plant/protein.","AT5G19150",null,419.24,0.82609,0.1368,6.0388,{"v":1.55E-9,"d":"1.55E-09"},{"v":1.58e-08,"d":"1.58E-08"},"pfkB-like carbohydrate kinase family protein.","AT3G60690","SAUR59",216.6,-1.1131,0.16132,-6.8999,{"v":5.21e-12,"d":"5.21E-12"},5.13E-11,"SAUR-like auxin-responsive protein family.","AT4G24680","MOS1",871.39,0.45995,0.086816,5.298,{"v":1.17E-7,"d":"1.17E-07"},{"v":1.12e-06,"d":"1.12E-06"},"full_name=MODIFIER OF snc1. modifier of snc1. Encodes MOS1 (MODIFIER OF snc1). MOS1 contains a BAT2 domain that is conserved in plants and animals. MOS1 regulates the expression of SNC1, a TIR-NB-LRR-type of R protein."]
["AT5G17770","CBR",840.12,-0.50176,0.10377,-4.8355,{"v":1.33E-6,"d":"1.33E-06"},{"v":1.44e-05,"d":"1.44E-05"},"full_name=NADH:cytochrome B5 reductase 1. NADH:cytochrome B5 reductase 1. Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor.","AT4G32260","PDE334",1031.2,-0.55563,0.10654,-5.2152,{"v":1.84e-07,"d":"1.84E-07"},{"v":1.92e-06,"d":"1.92E-06"},"full_name=PIGMENT DEFECTIVE 334. ATPase, F0 complex, subunit B/B', bacterial/chloroplast.","AT1G17420","LOX3",132.91,-1.7952,0.29799,-6.0244,{"v":1.7e-09,"d":"1.70E-09"},{"v":1.72e-08,"d":"1.72E-08"},"full_name=lipoxygenase 3. lipoxygenase 3. LOX3 encode a Lipoxygenase. Lipoxygenases (LOXs) catalyze the oxygenation of fatty acids (FAs).","AT1G68190","BBX27",47.387,2.5933,0.37638,6.8902,{"v":5.57e-12,"d":"5.57E-12"},{"v":5.47e-11,"d":"5.47E-11"},"full_name=B-box domain protein 27. B-box zinc finger family protein.","AT1G69600","ZFHD1",73.926,1.3897,0.26265,5.2911,{"v":1.22e-07,"d":"1.22E-07"},{"v":1.16e-06,"d":"1.16E-06"},"full_name=zinc finger homeodomain 1. zinc finger homeodomain 1. Encodes ZFHD1, a member of the zinc finger homeodomain transcriptional factor family. Binds to the 62 bp promoter region of ERD1 (early responsive to dehydration stress 1). Expression of ZFHD1 is induced by drought, high salinity and abscisic acid."]
["AT5G40382",null,57.94,1.4414,0.29866,4.8264,{"v":1.39E-6,"d":"1.39E-06"},{"v":1.5E-5,"d":"1.50E-05"},"Cytochrome c oxidase subunit Vc family protein.","AT1G14290","SBH2",28.839,-2.2034,0.42282,-5.2112,{"v":1.88e-07,"d":"1.88E-07"},{"v":1.96e-06,"d":"1.96E-06"},"full_name=sphingoid base hydroxylase 2. sphingoid base hydroxylase 2. Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth.","AT4G33220","PME44",23.687,-4.3072,0.71566,-6.0186,{"v":1.76e-09,"d":"1.76E-09"},{"v":1.78e-08,"d":"1.78E-08"},"full_name=pectin methylesterase 44. pectin methylesterase 44.","AT5G08530","CI51",631.32,-0.92009,0.13358,-6.8882,{"v":5.65e-12,"d":"5.65E-12"},{"v":5.53e-11,"d":"5.53E-11"},"full_name=51 kDa subunit of complex I. 51 kDa subunit of complex I.","AT2G32510","MAPKKK17",15.835,-3.9813,0.75358,-5.2831,{"v":1.27e-07,"d":"1.27E-07"},{"v":1.21e-06,"d":"1.21E-06"},"full_name=mitogen-activated protein kinase kinase kinase 17. mitogen-activated protein kinase kinase kinase 17. member of MEKK subfamily"]
["AT2G30790","PSBP-2",8.0964,-6.4034,1.3296,-4.8161,{"v":1.46E-6,"d":"1.46E-06"},{"v":1.57e-05,"d":"1.57E-05"},"full_name=photosystem II subunit P-2. photosystem II subunit P-2. Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution.","AT3G03270","HRU1",259.2,-1.3169,0.2534,-5.1971,{"v":2.02e-07,"d":"2.02E-07"},{"v":2.11e-06,"d":"2.11E-06"},"Adenine nucleotide alpha hydrolases-like superfamily protein.","AT4G26190",null,359.73,0.909,0.15133,6.0069,{"v":1.89e-09,"d":"1.89E-09"},{"v":1.91e-08,"d":"1.91E-08"},"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein.","AT5G54250","CNGC4",37.74,-4.2851,0.62313,-6.8767,{"v":6.13e-12,"d":"6.13E-12"},{"v":5.98e-11,"d":"5.98E-11"},"full_name=cyclic nucleotide-gated cation channel 4. cyclic nucleotide-gated cation channel 4. member of Cyclic nucleotide gated channel family, downstream component of the signaling pathways leading to HR resistance. mutant plants exhibit gene-for-gene disease resistance against avirulent Pseudomonas syringae despite the near-complete absence of the hypersensitive response (HR). Salicylic acid accumulation in dnd2 mutants is completely PAD4-independent.","AT3G52250","PWR",909.56,0.50685,0.096122,5.273,{"v":1.34e-07,"d":"1.34E-07"},{"v":1.28E-6,"d":"1.28E-06"},"Duplicated homeodomain-like superfamily protein. Encodes a protein with a putative role in mRNA splicing."]
["AT1G20080","SYTB",14.124,-3.4181,0.71052,-4.8107,{"v":1.5E-6,"d":"1.50E-06"},{"v":1.61e-05,"d":"1.61E-05"},"Calcium-dependent lipid-binding (CaLB domain) family protein. Encodes a synaptotagmin localized on the Golgi apparatus and that regulates protein secretion via the unconventional protein transport from the cytosol to the extracellular matrix in plant cells.","AT1G66760",null,20.923,2.8723,0.55319,5.1923,{"v":2.08e-07,"d":"2.08E-07"},{"v":2.16e-06,"d":"2.16E-06"},"MATE efflux family protein.","AT1G71691",null,24.999,-5.4472,0.90911,-5.9918,{"v":2.08e-09,"d":"2.08E-09"},{"v":2.09e-08,"d":"2.09E-08"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT1G29350",null,1049.9,0.605,0.08808,6.8688,{"v":6.48e-12,"d":"6.48E-12"},{"v":6.3e-11,"d":"6.30E-11"},"RNA polymerase II degradation factor-like protein (DUF1296).","AT5G01410","RSR4",1354.2,0.45741,0.086817,5.2687,{"v":1.37E-7,"d":"1.37E-07"},{"v":1.3E-6,"d":"1.30E-06"},"full_name=REDUCED SUGAR RESPONSE 4. Aldolase-type TIM barrel family protein. Encodes a protein predicted to function in tandem with PDX2 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis."]
["AT1G30510","RFNR2",227.8,-0.98284,0.2046,-4.8036,{"v":1.56e-06,"d":"1.56E-06"},{"v":1.66E-5,"d":"1.66E-05"},"full_name=root FNR 2. root FNR 2. Encodes a root-type ferredoxin:NADP(H) oxidoreductase.","AT4G23490",null,61.369,-1.4904,0.28747,-5.1847,{"v":2.16E-7,"d":"2.16E-07"},{"v":2.24e-06,"d":"2.24E-06"},"fringe-like protein (DUF604).","AT1G09380","UMAMIT25",1304.1,-0.82652,0.13816,-5.9826,{"v":2.2e-09,"d":"2.20E-09"},{"v":2.2e-08,"d":"2.20E-08"},"full_name=Usually multiple acids move in and out Transporters 25. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT2G37770","ChlAKR",74.516,-1.7848,0.26025,-6.8578,{"v":6.99e-12,"d":"6.99E-12"},{"v":6.78e-11,"d":"6.78E-11"},"full_name=Chloroplastic aldo-keto reductase. NAD(P)-linked oxidoreductase superfamily protein. Encodes an NADPH-dependent aldo-keto reductase that can act on a wide variety of substrates in vitro including saturated and unsaturated aldehydes, steroids, and sugars. GFP-tagged AKR4C9 localizes to the chloroplast where it may play a role in detoxifying reactive carbonyl compounds that threaten to impair the photosynthetic process. Transcript levels for this gene are up-regulated in response to cold, salt, and drought stress.","AT3G18570",null,1537.8,-0.55518,0.10555,-5.2599,{"v":1.44e-07,"d":"1.44E-07"},{"v":1.36e-06,"d":"1.36E-06"},"Oleosin family protein."]
["AT2G30590","WRKY21",328.44,-0.68831,0.1437,-4.7898,{"v":1.67e-06,"d":"1.67E-06"},{"v":1.78e-05,"d":"1.78E-05"},"full_name=WRKY DNA-binding protein 21. WRKY DNA-binding protein 21. Encodes WRKY DNA-binding protein 21 (WRKY21).","AT3G52340","SPP2",647.17,0.58395,0.11275,5.1792,{"v":2.23E-7,"d":"2.23E-07"},{"v":2.3E-6,"d":"2.30E-06"},"full_name=sucrose-6F-phosphate phosphohydrolase 2. sucrose-6F-phosphate phosphohydrolase 2. sucrose-phosphatase (SPP2)","AT3G24240","RGFR1",30.165,-2.6033,0.43588,-5.9724,{"v":2.34e-09,"d":"2.34E-09"},{"v":2.34e-08,"d":"2.34E-08"},"Leucine-rich repeat receptor-like protein kinase family protein.","AT1G03290",null,33.867,-4.5852,0.66972,-6.8465,{"v":7.57e-12,"d":"7.57E-12"},{"v":7.32e-11,"d":"7.32E-11"},"ELKS/Rab6-interacting/CAST family protein.","AT3G57680",null,96.361,-1.2163,0.23135,-5.2574,{"v":1.46e-07,"d":"1.46E-07"},{"v":1.38e-06,"d":"1.38E-06"},"Peptidase S41 family protein."]
["AT2G18440","GUT15",1005.9,0.75914,0.15876,4.7818,{"v":1.74e-06,"d":"1.74E-06"},{"v":1.84E-5,"d":"1.84E-05"},"other_RNA. Encodes a noncoding RNA, a member of an emerging class of transcripts that lack significant open reading frames and encode RNA as their final product.","AT4G16146",null,589.96,0.60455,0.11696,5.169,{"v":2.35E-7,"d":"2.35E-07"},{"v":2.42e-06,"d":"2.42E-06"},"cAMP-regulated phosphoprotein 19-related protein.","AT3G15510","NAC2",658.11,-1.0283,0.1725,-5.9612,{"v":2.5e-09,"d":"2.50E-09"},{"v":2.49e-08,"d":"2.49E-08"},"full_name=NAC domain containing protein 2. NAC domain containing protein 2. Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2.","AT4G17280",null,29.839,-8.5129,1.246,-6.8324,{"v":8.35e-12,"d":"8.35E-12"},{"v":8.04e-11,"d":"8.04E-11"},"Auxin-responsive family protein.","AT1G32130","IWS1",1002.9,0.44215,0.084475,5.2341,{"v":1.66E-7,"d":"1.66E-07"},{"v":1.56e-06,"d":"1.56E-06"},"Transcription elongation factor (TFIIS) family protein. The C-terminal portion of this protein has high homology to the C-termini of the IWS1 (Interacts With Spt6) proteins found in yeast and humans. Interacts with transcription factor BES1. Involved in brassinosteroid-regulated gene expression."]
["AT4G00460","ROPGEF3",13.388,-4.6544,0.97431,-4.7771,{"v":1.78e-06,"d":"1.78E-06"},{"v":1.88E-5,"d":"1.88E-05"},"full_name=ROP (rho of plants) guanine nucleotide exchange factor 3. RHO guanyl-nucleotide exchange factor 3. Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.","AT3G02730","TRXF1",338.75,-0.68174,0.13211,-5.1603,{"v":2.47e-07,"d":"2.47E-07"},{"v":2.53e-06,"d":"2.53E-06"},"full_name=thioredoxin F-type 1. thioredoxin F-type 1.","AT2G28650","EXO70H8",336.95,-1.1029,0.18534,-5.9509,{"v":2.67e-09,"d":"2.67E-09"},{"v":2.65e-08,"d":"2.65E-08"},"full_name=exocyst subunit exo70 family protein H8. exocyst subunit exo70 family protein H8. A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.","AT2G38250",null,28.379,-3.4598,0.50697,-6.8244,{"v":8.83e-12,"d":"8.83E-12"},{"v":8.48e-11,"d":"8.48E-11"},"Homeodomain-like superfamily protein.","AT5G50360","AITR5",1837.9,-0.53924,0.10307,-5.2316,{"v":1.68E-7,"d":"1.68E-07"},{"v":1.57E-6,"d":"1.57E-06"},"von willebrand factor A domain protein."]
["AT1G15180",null,671.11,0.54317,0.114,4.7645,{"v":1.89e-06,"d":"1.89E-06"},{"v":1.99e-05,"d":"1.99E-05"},"MATE efflux family protein.","AT5G21280","ATR7",149.27,0.91366,0.1773,5.1532,{"v":2.56e-07,"d":"2.56E-07"},{"v":2.61E-6,"d":"2.61E-06"},"hydroxyproline-rich glycoprotein family protein.","AT5G64440","FAAH",278.18,-1.064,0.17906,-5.942,{"v":2.82e-09,"d":"2.82E-09"},{"v":2.79e-08,"d":"2.79E-08"},"full_name=fatty acid amide hydrolase. fatty acid amide hydrolase. AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth.","AT2G46820","PSI-P",84.107,1.7394,0.25569,6.8027,{"v":1.03e-11,"d":"1.03E-11"},{"v":9.83e-11,"d":"9.83E-11"},"full_name=photosystem I P subunit. photosystem I P subunit. Encodes the P subunit of Photosystem I. About 25% of the TMP14 pool appeared to be phosphorylated, and this ratio is not affected by light. Contains seven phosphorylation sites on threonine residue and chloroplast targeting signal. Located in the proximity of PSI-L, -H and -O subunits.","AT4G19160",null,199.68,0.94485,0.18097,5.2209,{"v":1.78e-07,"d":"1.78E-07"},{"v":1.66E-6,"d":"1.66E-06"},"transglutaminase family protein."]
["AT3G02640",null,14.657,-3.2592,0.68469,-4.7602,{"v":1.93e-06,"d":"1.93E-06"},{"v":2.03e-05,"d":"2.03E-05"},"transmembrane protein.","AT1G47960","C/VIF1",336.42,-0.77198,0.14998,-5.1473,{"v":2.64e-07,"d":"2.64E-07"},{"v":2.69e-06,"d":"2.69E-06"},"full_name=cell wall / vacuolar inhibitor of fructosidase 1. cell wall / vacuolar inhibitor of fructosidase 1. Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. This protein may inhibit their activity.","AT3G45900",null,259.45,0.91076,0.15337,5.9383,{"v":2.88E-9,"d":"2.88E-09"},{"v":2.84E-8,"d":"2.84E-08"},"Ribonuclease P protein subunit P38-like protein.","AT1G74670","GASA6",28.413,-8.4369,1.2422,-6.7919,{"v":1.11e-11,"d":"1.11E-11"},1.06E-10,"full_name=GA-stimulated Arabidopsis 6. Gibberellin-regulated family protein.","AT1G73060","LPA3",386.26,-0.63366,0.12161,-5.2106,{"v":1.88e-07,"d":"1.88E-07"},{"v":1.75E-6,"d":"1.75E-06"},"full_name=Low PSII Accumulation 3. Low PSII Accumulation 3."]
["AT1G13930",null,250.24,-0.77242,0.16254,-4.7521,{"v":2.01e-06,"d":"2.01E-06"},{"v":2.11e-05,"d":"2.11E-05"},"oleosin-B3-like protein. Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress.","AT3G48690","CXE12",219.33,0.84137,0.16379,5.137,{"v":2.79E-7,"d":"2.79E-07"},{"v":2.83E-6,"d":"2.83E-06"},"alpha/beta-Hydrolases superfamily protein. Encodes a protein with carboxylesterase whose activity was tested using both pNA and 2,4-D-methyl.","AT3G02830","ZFN1",61.997,-1.777,0.29972,-5.9291,{"v":3.05E-9,"d":"3.05E-09"},{"v":3e-08,"d":"3.00E-08"},"full_name=zinc finger protein 1. zinc finger protein 1. Encodes a zinc finger protein that binds to PORA mRNA in vivo and recruits the Pfr form of phytochrome to the 5&#8242;-UTR of PORA mRNA to regulate translation of the mRNA.","AT2G36695",null,46.11,-7.2635,1.0706,-6.7843,{"v":1.17e-11,"d":"1.17E-11"},1.11E-10,"hypothetical protein.","AT5G13750","ZIFL1",207.15,0.91576,0.17592,5.2055,{"v":1.93e-07,"d":"1.93E-07"},{"v":1.79E-6,"d":"1.79E-06"},"full_name=zinc induced facilitator-like 1. zinc induced facilitator-like 1."]
["AT4G38062",null,7.7765,-6.3453,1.336,-4.7496,{"v":2.04E-6,"d":"2.04E-06"},{"v":2.13e-05,"d":"2.13E-05"},"basic helix loop helix (bHLH) DNA-binding superfamily protein.","AT3G63180","TKL",216.49,-0.85247,0.16611,-5.1321,{"v":2.87e-07,"d":"2.87E-07"},{"v":2.9e-06,"d":"2.90E-06"},"full_name=TIC-like. TIC-like protein.","AT1G56110","NOP56",370.12,0.87224,0.14721,5.9253,{"v":3.12E-9,"d":"3.12E-09"},{"v":3.06e-08,"d":"3.06E-08"},"full_name=homolog of nucleolar protein NOP56. NOP56-like pre RNA processing ribonucleoprotein. NOP56-like protein","AT4G36910","LEJ2",1468.7,0.57085,0.084181,6.7812,{"v":1.19e-11,"d":"1.19E-11"},1.13E-10,"full_name=LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2. Cystathionine beta-synthase (CBS) family protein. Encodes a single cystathionine beta-synthase domain-containing protein. Modulates development by regulating the thioredoxin system.","AT2G39705","RTFL8",24.92,3.0283,0.58219,5.2016,{"v":1.98E-7,"d":"1.98E-07"},{"v":1.83e-06,"d":"1.83E-06"},"full_name=ROTUNDIFOLIA like 8. ROTUNDIFOLIA like 8."]
["AT5G60930",null,21.188,-2.5355,0.53453,-4.7433,{"v":2.1e-06,"d":"2.10E-06"},{"v":2.19E-5,"d":"2.19E-05"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT3G13690",null,142.3,-0.94083,0.18413,-5.1096,{"v":3.23e-07,"d":"3.23E-07"},{"v":3.25e-06,"d":"3.25E-06"},"kinase with adenine nucleotide alpha hydrolases-like domain-containing protein.","AT5G56040","SKM2",78.826,-1.5208,0.25691,-5.9196,{"v":3.23e-09,"d":"3.23E-09"},{"v":3.15e-08,"d":"3.15E-08"},"Leucine-rich receptor-like protein kinase family protein.","AT5G19550","ASP2",346.11,-0.87471,0.12916,-6.7725,1.27E-11,{"v":1.2E-10,"d":"1.20E-10"},"full_name=aspartate aminotransferase 2. aspartate aminotransferase 2. Nitrogen metabolism. Major cytosolic isoenzyme controlling aspartate biosynthesis in the light.","AT4G32030",null,63.402,1.4511,0.27973,5.1874,{"v":2.13e-07,"d":"2.13E-07"},{"v":1.96e-06,"d":"1.96E-06"},"hypothetical protein."]
["AT4G26130",null,160.67,-0.9284,0.19576,-4.7424,{"v":2.11e-06,"d":"2.11E-06"},{"v":2.2e-05,"d":"2.20E-05"},"cotton fiber protein.","AT3G54400",null,18.326,-3.2404,0.63461,-5.1061,{"v":3.29e-07,"d":"3.29E-07"},{"v":3.31e-06,"d":"3.31E-06"},"Eukaryotic aspartyl protease family protein.","AT5G04895","ABO6",148.59,1.2882,0.21764,5.919,{"v":3.24E-9,"d":"3.24E-09"},{"v":3.16e-08,"d":"3.16E-08"},"full_name=ABA overly sensitive 6. DEA(D/H)-box RNA helicase family protein.","AT5G27750",null,230.54,1.0774,0.15909,6.7719,1.27E-11,{"v":1.2E-10,"d":"1.20E-10"},"F-box/FBD-like domains containing protein.","AT1G16860","SHOU4L",213.32,0.80573,0.15553,5.1806,{"v":2.21e-07,"d":"2.21E-07"},{"v":2.04E-6,"d":"2.04E-06"},"Ubiquitin-specific protease family C19-related protein."]
["AT2G46710","ROPGAP3",462.58,-0.6766,0.1428,-4.738,{"v":2.16e-06,"d":"2.16E-06"},{"v":2.24e-05,"d":"2.24E-05"},"full_name=ROP guanosine triphosphatase (GTPase)-activating protein 3. Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein.","AT5G14320","EMB3137",140.01,-0.94685,0.18557,-5.1025,{"v":3.35e-07,"d":"3.35E-07"},{"v":3.37e-06,"d":"3.37E-06"},"full_name=EMBRYO DEFECTIVE 3137. Ribosomal protein S13/S18 family.","AT1G27460","NPGR1",130.04,-1.4761,0.24965,-5.9125,{"v":3.37e-09,"d":"3.37E-09"},{"v":3.28e-08,"d":"3.28E-08"},"full_name=no pollen germination related 1. no pollen germination related 1. encodes a calmodulin-binding protein that is expressed in pollen, suspension culture cells, flowers, and fruits.","AT5G63860","UVR8",1944.8,0.58372,0.086286,6.7649,1.33E-11,1.26E-10,"full_name=UVB-RESISTANCE 8. Regulator of chromosome condensation (RCC1) family protein. UV-B-specific signaling component that orchestrates expression of a range of genes with vital UV-protective functions. Located in the nucleus and the cytosol. Associates with chromatin via histones. UV-B light promotes URV8 protein accumulation in the nucleus. UVR8 interaction with COP1 is negatively regulated by RUP1 and RUP2.","AT2G03540",null,22.793,2.8545,0.55119,5.1788,{"v":2.23E-7,"d":"2.23E-07"},{"v":2.05e-06,"d":"2.05E-06"},"transposable_element_gene."]
["AT1G65820",null,772.59,0.51928,0.10968,4.7345,{"v":2.2e-06,"d":"2.20E-06"},{"v":2.27E-5,"d":"2.27E-05"},"microsomal glutathione s-transferase.","AT1G79460","GA2",549.37,-0.58501,0.11495,-5.0894,{"v":3.59e-07,"d":"3.59E-07"},{"v":3.59e-06,"d":"3.59E-06"},"full_name=GA REQUIRING 2. Terpenoid cyclases/Protein prenyltransferases superfamily protein. Encodes for a protein with ent-kaurene synthase B activity which catalyzes the second step in the cyclization of GGPP to ent-kaurene in the gibberellins biosynthetic pathway.","AT3G11180","JOX1",40.349,-2.2031,0.37289,-5.9081,{"v":3.46E-9,"d":"3.46E-09"},{"v":3.36e-08,"d":"3.36E-08"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT4G25690",null,329.08,0.86299,0.12776,6.7549,1.43E-11,1.34E-10,"stress response NST1-like protein.","AT2G40670","RR16",10.284,-6.973,1.3479,-5.1732,{"v":2.3e-07,"d":"2.30E-07"},{"v":2.1e-06,"d":"2.10E-06"},"full_name=response regulator 16. response regulator 16. response regulator 16"]
["AT5G44340","TUB4",1001.3,-0.48236,0.10202,-4.728,{"v":2.27e-06,"d":"2.27E-06"},{"v":2.34E-5,"d":"2.34E-05"},"full_name=tubulin beta chain 4. tubulin beta chain 4. beta tubulin gene","AT5G10650","2024-07-01",628.63,0.55147,0.10851,5.0822,{"v":3.73e-07,"d":"3.73E-07"},{"v":3.73e-06,"d":"3.73E-06"},"RING/U-box superfamily protein.","AT2G34790","MEE23",677.11,-0.94831,0.16078,-5.8982,{"v":3.68e-09,"d":"3.68E-09"},{"v":3.56e-08,"d":"3.56E-08"},"full_name=MATERNAL EFFECT EMBRYO ARREST 23. FAD-binding Berberine family protein.","AT3G60220","ATL4",48.554,-2.3745,0.35252,-6.7359,{"v":1.63e-11,"d":"1.63E-11"},{"v":1.52e-10,"d":"1.52E-10"},"full_name=TOXICOS EN LEVADURA 4. TOXICOS EN LEVADURA 4. Encodes a putative RING-H2 zinc finger protein ATL4 (ATL4).","AT1G15500","ATNTT2",1249,0.38431,0.074484,5.1596,{"v":2.47e-07,"d":"2.47E-07"},{"v":2.26E-6,"d":"2.26E-06"},"TLC ATP/ADP transporter."]
["AT5G19520","MSL9",67.953,-1.315,0.27885,-4.7157,{"v":2.41e-06,"d":"2.41E-06"},{"v":2.47e-05,"d":"2.47E-05"},"full_name=mechanosensitive channel of small conductance-like 9. mechanosensitive channel of small conductance-like 9.","AT5G23280","TCP7",130.69,1.0097,0.1994,5.0637,{"v":4.11e-07,"d":"4.11E-07"},{"v":4.08e-06,"d":"4.08E-06"},"TCP family transcription factor.","AT5G40870","UK/UPRT1",87.771,-1.7083,0.29027,-5.8853,{"v":3.97e-09,"d":"3.97E-09"},{"v":3.83e-08,"d":"3.83E-08"},"full_name=uridine kinase/uracil phosphoribosyltransferase 1. uridine kinase/uracil phosphoribosyltransferase 1. Encodes a protein that with uridine kinase but not uracil phosphoribosyltransferase activities.","AT2G18280","TLP2",371.93,0.81562,0.12132,6.7227,{"v":1.78e-11,"d":"1.78E-11"},1.66E-10,"full_name=tubby like protein 2. tubby like protein 2. Member of TLP family","AT4G26200","ACS7",16.243,-4.3024,0.83474,-5.1541,{"v":2.55e-07,"d":"2.55E-07"},{"v":2.31e-06,"d":"2.31E-06"},"full_name=1-amino-cyclopropane-1-carboxylate synthase 7. 1-amino-cyclopropane-1-carboxylate synthase 7. Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA."]
["AT3G14760",null,101.51,-1.0962,0.23269,-4.7111,{"v":2.46e-06,"d":"2.46E-06"},{"v":2.52e-05,"d":"2.52E-05"},"transmembrane protein.","AT2G24440",null,49.109,-1.7067,0.33726,-5.0604,{"v":4.18e-07,"d":"4.18E-07"},{"v":4.15e-06,"d":"4.15E-06"},"selenium binding protein.","AT1G52695",null,22.019,-4.2385,0.72056,-5.8822,{"v":4.05e-09,"d":"4.05E-09"},{"v":3.89e-08,"d":"3.89E-08"},"alpha/beta-Hydrolases superfamily protein.","AT4G24750",null,132.27,1.3135,0.19559,6.7154,{"v":1.88e-11,"d":"1.88E-11"},{"v":1.74e-10,"d":"1.74E-10"},"Rhodanese/Cell cycle control phosphatase superfamily protein.","AT5G19520","MSL9",43.304,2.0437,0.39678,5.1505,{"v":2.6E-7,"d":"2.60E-07"},{"v":2.35e-06,"d":"2.35E-06"},"full_name=mechanosensitive channel of small conductance-like 9. mechanosensitive channel of small conductance-like 9."]
["AT2G38480","CASPL4B1",88.259,1.1556,0.24587,4.7001,{"v":2.6e-06,"d":"2.60E-06"},{"v":2.65E-5,"d":"2.65E-05"},"Uncharacterized protein family (UPF0497).","AT2G05210","AtPOT1a",81.588,-1.2033,0.23836,-5.0483,{"v":4.46E-7,"d":"4.46E-07"},{"v":4.41e-06,"d":"4.41E-06"},"full_name=Protection of Telomeres 1a. Nucleic acid-binding, OB-fold-like protein. Encodes AtPOT1a, an accessory factor for telomerase required for positive telomere length regulation. Note on nomenclature: different names have been given to Arabidopsis POT-like genes (Kuchar and Fajkus, 2004; Shakirov et al, 2005; Tani and Murata, 2005). According to a unifying nomenclature (Surovtseva et al, 2007), At2g05210 (previously named AtPOT1) is designated AtPOT1a, while At5g06310 (previously named AtPOT2) is designated AtPOT1b.","AT5G09670",null,176.56,-1.0509,0.17889,-5.8744,{"v":4.24e-09,"d":"4.24E-09"},{"v":4.07E-8,"d":"4.07E-08"},"loricrin-like protein.","AT5G23810","AAP7",25.439,-5.076,0.7569,-6.7062,{"v":2e-11,"d":"2.00E-11"},{"v":1.85e-10,"d":"1.85E-10"},"full_name=amino acid permease 7. amino acid permease 7. Encodes nonfunctional amino acid transporter. AAP7 is the most distantly related member of the AAP family, a group of well characterized amino acid transporters within the ATF1 superfamily. Expression of this gene has not been detected with RNA gel blots or promoter GUS studies.","AT5G48380","BIR1",556.06,0.5539,0.10757,5.149,{"v":2.62e-07,"d":"2.62E-07"},{"v":2.36e-06,"d":"2.36E-06"},"full_name=BAK1-interacting receptor-like kinase 1. BAK1-interacting receptor-like kinase 1. Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway."]
["AT5G62710",null,40.028,-1.6503,0.35152,-4.6948,{"v":2.67e-06,"d":"2.67E-06"},{"v":2.72E-5,"d":"2.72E-05"},"Leucine-rich repeat protein kinase family protein.","AT2G19730",null,892.38,-0.59174,0.11735,-5.0425,{"v":4.59e-07,"d":"4.59E-07"},{"v":4.53e-06,"d":"4.53E-06"},"Ribosomal L28e protein family.","AT1G03530","NAF1",177.46,1.1745,0.20022,5.866,{"v":4.46e-09,"d":"4.46E-09"},{"v":4.27e-08,"d":"4.27E-08"},"full_name=nuclear assembly factor 1. nuclear assembly factor 1.","AT1G24265",null,111.72,1.3993,0.20897,6.6965,{"v":2.14e-11,"d":"2.14E-11"},{"v":1.97e-10,"d":"1.97E-10"},"bZIP transcription factor, putative (DUF1664).","AT5G11390","WIT1",474.61,0.54614,0.10619,5.1428,{"v":2.71e-07,"d":"2.71E-07"},{"v":2.44e-06,"d":"2.44E-06"},"full_name=WPP domain-interacting protein 1. WPP domain-interacting protein 1. Encodes one of the WPP domain-interacting proteins (WIT1/AT5G11390, WIT2/AT1G68910) required for RanGAP nuclear envelope association in root tip cells. Ran GTPase plays essential roles in multiple cellular processes, including nucleocytoplasmic transport, spindle formation, and postmitotic nuclear envelope reassembly. The cytoplasmic Ran GTPase activating protein RanGAP is critical to establish a functional RanGTP/RanGDP gradient across the nuclear envelope and is associated with the outer surface of the nuclear envelope in metazoan and higher plant cells. Arabidopsis thaliana RanGAP association with the root tip nuclear envelope requires a family of likely plant-specific nucleoporins combining coiled-coil and transmembrane domains (CC-TMD) and WPP domain-interacting proteins (WIPs). WIT1 and WIT2 have been identified as a second family of CC-TMD proteins, structurally similar, yet clearly distinct from the WIP family, that is required for RanGAP nuclear envelop association in root tip cells."]
["AT5G23790","GolS5",51.762,-1.4356,0.3069,-4.6779,{"v":2.9e-06,"d":"2.90E-06"},{"v":2.94E-5,"d":"2.94E-05"},"full_name=galactinol synthase 5. galactinol synthase 5. Predicted to encode a galactinol synthase.","AT5G50600","HSD1",19666,0.59514,0.11816,5.037,{"v":4.73e-07,"d":"4.73E-07"},{"v":4.65e-06,"d":"4.65E-06"},"full_name=hydroxysteroid dehydrogenase 1. hydroxysteroid dehydrogenase 1. Encodes a hydroxysteroid dehydrogenase shown to act as a NADP+-dependent 11&beta;-,17&beta;-hydroxysteroid dehydrogenase/17&beta;-ketosteroid reductase called HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination. To date, the endogenous substrates of this enzyme are not known.","AT1G01650","SPPL4",783.03,0.78846,0.13466,5.855,{"v":4.77e-09,"d":"4.77E-09"},{"v":4.54e-08,"d":"4.54E-08"},"full_name=SIGNAL PEPTIDE PEPTIDASE-LIKE 4. SIGNAL PEPTIDE PEPTIDASE-LIKE 4.","AT3G57470",null,245.1,0.98262,0.14697,6.686,2.29E-11,2.11E-10,"Insulinase (Peptidase family M16) family protein.","AT2G31400","GUN1",1117.4,-0.42318,0.082403,-5.1354,{"v":2.81e-07,"d":"2.81E-07"},{"v":2.53e-06,"d":"2.53E-06"},"full_name=genomes uncoupled 1. s uncoupled 1. Encodes a a chloroplast-localized pentatricopeptide-repeat protein involved in regulation of nuclear gene expression."]
["AT2G31570","GPX2",503.89,-0.65875,0.14103,-4.6711,{"v":3e-06,"d":"3.00E-06"},{"v":3.03e-05,"d":"3.03E-05"},"full_name=glutathione peroxidase 2. glutathione peroxidase 2. glutathione peroxidase GPx","AT2G17220","Kin3",182.83,0.847,0.16826,5.0338,{"v":4.81e-07,"d":"4.81E-07"},{"v":4.71e-06,"d":"4.71E-06"},"full_name=kinase 3. Protein kinase superfamily protein. Encodes a putative serine/threonine-specific protein kinase kin3. Protein is N-myristoylated.","AT5G04380",null,602.64,-0.71378,0.12198,-5.8516,{"v":4.87e-09,"d":"4.87E-09"},{"v":4.62e-08,"d":"4.62E-08"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT3G48710",null,207.3,1.195,0.17912,6.6713,{"v":2.54e-11,"d":"2.54E-11"},{"v":2.33e-10,"d":"2.33E-10"},"DEK domain-containing chromatin associated protein.","AT3G46640","PCL1",360.01,0.68596,0.13373,5.1294,{"v":2.91E-7,"d":"2.91E-07"},{"v":2.6e-06,"d":"2.60E-06"},"full_name=PHYTOCLOCK 1. Homeodomain-like superfamily protein. Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter."]
["AT2G27580","SAP3",141.13,0.85395,0.18328,4.6594,{"v":3.17e-06,"d":"3.17E-06"},{"v":3.19e-05,"d":"3.19E-05"},"A20/AN1-like zinc finger family protein.","AT4G21380","RK3",157.39,-1.0143,0.20228,-5.0141,{"v":5.33e-07,"d":"5.33E-07"},{"v":5.2e-06,"d":"5.20E-06"},"full_name=receptor kinase 3. receptor kinase 3. encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels.","AT2G16365","PCH1",61.367,-1.6505,0.28239,-5.8447,{"v":5.07e-09,"d":"5.07E-09"},{"v":4.8E-8,"d":"4.80E-08"},"F-box family protein.","AT3G27090",null,237.05,-1.1206,0.16833,-6.6573,{"v":2.79e-11,"d":"2.79E-11"},2.55E-10,"DCD (Development and Cell Death) domain protein.","AT5G65380",null,967.94,0.47343,0.092668,5.1089,{"v":3.24e-07,"d":"3.24E-07"},{"v":2.89e-06,"d":"2.89E-06"},"MATE efflux family protein."]
["AT3G13277",null,77.65,1.4233,0.30592,4.6524,{"v":3.28e-06,"d":"3.28E-06"},{"v":3.3e-05,"d":"3.30E-05"},"other_RNA.","AT3G10010","DML2",687.86,-0.54979,0.1099,-5.0028,{"v":5.65e-07,"d":"5.65E-07"},{"v":5.5e-06,"d":"5.50E-06"},"full_name=demeter-like 2. demeter-like 2. Encodes a protein with DNA glycosylase activity that is involved in maintaining methylation marks.","AT5G43310",null,245.49,-1.0128,0.17341,-5.8406,{"v":5.2e-09,"d":"5.20E-09"},{"v":4.91e-08,"d":"4.91E-08"},"COP1-interacting protein-like protein.","AT5G59820","RHL41",60.5,-2.8442,0.42738,-6.655,{"v":2.83e-11,"d":"2.83E-11"},{"v":2.58e-10,"d":"2.58E-10"},"full_name=RESPONSIVE TO HIGH LIGHT 41. C2H2-type zinc finger family protein. Encodes a zinc finger protein involved in high light and cold acclimation. Overexpression of this putative transcription factor increases the expression level of 9 cold-responsive genes and represses the expression level of 15 cold-responsive genes, including CBF genes. Also, lines overexpressing this gene exhibits a small but reproducible increase in freeze tolerance. Because of the repression of the CBF genes by the overexpression of this gene, the authors speculate that this gene may be involved in negative regulatory circuit of the CBF pathway.","AT5G38050",null,108.28,-1.048,0.2054,-5.1022,{"v":3.36e-07,"d":"3.36E-07"},{"v":2.98e-06,"d":"2.98E-06"},"RNA polymerase II transcription elongation factor."]
["AT1G04760","VAMP726",38.395,-1.7283,0.37175,-4.649,{"v":3.34e-06,"d":"3.34E-06"},{"v":3.34e-05,"d":"3.34E-05"},"full_name=vesicle-associated membrane protein 726. vesicle-associated membrane protein 726. member of Synaptobrevin -like protein family","AT5G07830","GUS2",1526.4,0.53434,0.10688,4.9996,{"v":5.75E-7,"d":"5.75E-07"},{"v":5.57E-6,"d":"5.57E-06"},"full_name=glucuronidase 2. glucuronidase 2. Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-&#946;-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be membrane-associated. It is involved in cell elongation.","AT1G60610",null,327.03,0.82388,0.14117,5.8359,{"v":5.35e-09,"d":"5.35E-09"},{"v":5.03E-8,"d":"5.03E-08"},"SBP (S-ribonuclease binding protein) family protein.","AT1G10522","PRIN2",55.594,2.0208,0.30432,6.6404,{"v":3.13e-11,"d":"3.13E-11"},2.85E-10,"full_name=PLASTID REDOX INSENSITIVE 2. Serine/Threonine-kinase. Encodes PRIN2 (plastid redox insensitive 2). PRIN2 mutants are impaired in PEP (plastid-encoded RNA polymerase) activity and high light-dependent plastid redox signalling to the nucleus.","AT1G61040","VIP5",390.52,0.59872,0.11751,5.0952,{"v":3.48e-07,"d":"3.48E-07"},{"v":3.09e-06,"d":"3.09E-06"},"full_name=vernalization independence 5. plus-3 domain-containing protein. Encodes a yeast Paf1C subunit homolog required for the expression of the MADS box gene FLC and other members of the FLC/MAF MADS-box gene family."]
["AT1G56020",null,101.89,-1.2823,0.27599,-4.6461,{"v":3.38e-06,"d":"3.38E-06"},{"v":3.39e-05,"d":"3.39E-05"},"serine/arginine repetitive matrix-like protein.","AT2G19570","CDA1",1170.8,0.57157,0.11434,4.9987,{"v":5.77e-07,"d":"5.77E-07"},{"v":5.6e-06,"d":"5.60E-06"},"full_name=cytidine deaminase 1. cytidine deaminase 1. Encodes a cytidine deaminase that deaminates cytidine and deoxycytidine and is competitively inhibited by cytosine-containing compounds.","AT2G22620","RGIL6",277.44,-1.0686,0.18313,-5.835,{"v":5.38E-9,"d":"5.38E-09"},{"v":5.06e-08,"d":"5.06E-08"},"Rhamnogalacturonate lyase family protein.","AT5G66590",null,233.69,0.97605,0.14704,6.6378,{"v":3.18e-11,"d":"3.18E-11"},{"v":2.89e-10,"d":"2.89E-10"},"CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein.","AT1G73500","MKK9",184.95,-1.1726,0.23018,-5.0945,{"v":3.5e-07,"d":"3.50E-07"},{"v":3.1E-6,"d":"3.10E-06"},"full_name=MAP kinase kinase 9. MAP kinase kinase 9. member of MAP Kinase Kinase family. Autophosphorylates and also phosphorylates MPK3 and MPK6. Independently involved in ethylene and calmalexin biosynthesis. Induces transcription of ACS2, ACS6, ERF1, ERF2, ERF5, ERF6, CYP79B2, CYP79B3, CYP71A13 and PAD3."]
["AT4G38430","ROPGEF1",383.34,-0.61455,0.13244,-4.6403,{"v":3.48e-06,"d":"3.48E-06"},{"v":3.47e-05,"d":"3.47E-05"},"full_name=ROP (rho of plants) guanine nucleotide exchange factor 1. rho guanyl-nucleotide exchange factor 1. Member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily, also known as DUF315). Interacts with ROP1 but the whole protein lacks Rho guanyl-nucleotide exchange factor activity in vitro. The DUF315/PRONE domain is sufficient to confer RopGEF catalytic activity.","AT2G30970","ASP1",299.65,-0.7038,0.14121,-4.9842,{"v":6.22e-07,"d":"6.22E-07"},{"v":6.02E-6,"d":"6.02E-06"},"full_name=aspartate aminotransferase 1. aspartate aminotransferase 1. ASPARTATE AMINOTRANSFERASE 1","AT5G47020",null,644.56,-0.70503,0.12119,-5.8173,{"v":5.98e-09,"d":"5.98E-09"},{"v":5.61e-08,"d":"5.61E-08"},"MraZ.","AT5G08670",null,673.2,0.64191,0.096865,6.6268,3.43E-11,{"v":3.11e-10,"d":"3.11E-10"},"ATP synthase alpha/beta family protein. Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.","AT4G10070",null,684.98,0.49254,0.096756,5.0906,{"v":3.57e-07,"d":"3.57E-07"},{"v":3.15e-06,"d":"3.15E-06"},"KH domain-containing protein."]
["AT1G04020","BARD1",7.2687,-6.2491,1.3475,-4.6376,{"v":3.52e-06,"d":"3.52E-06"},{"v":3.51e-05,"d":"3.51E-05"},"full_name=breast cancer associated RING 1. breast cancer associated RING 1. Encodes a protein containing two tandem BRCA1 C-Terminal (BRCT) domains, which function in phosphorylation-dependent protein%E2%80%93protein interactions.Loss of function mutations cause defects in meristem organization due to failure to repress WUS. BARD1 binds to WUS promoter and over expression of BARD reduces the extent of WUS expression.","AT2G32690","GRP23",17.217,-3.0366,0.61013,-4.977,{"v":6.46e-07,"d":"6.46E-07"},{"v":6.23e-06,"d":"6.23E-06"},"full_name=glycine-rich protein 23. glycine-rich protein 23. Glycine-rich protein similar in structure to GRP5. The expression of GRP23 is induced by HPA (cutin monomer, salicylic acid, and abscisic acid.","AT5G64580","EMB3144",217.92,0.90306,0.15529,5.8153,{"v":6.05e-09,"d":"6.05E-09"},{"v":5.66e-08,"d":"5.66E-08"},"full_name=EMBRYO DEFECTIVE 3144. AAA-type ATPase family protein.","AT1G01820","PEX11C",689.21,0.68139,0.10291,6.621,{"v":3.57e-11,"d":"3.57E-11"},{"v":3.22e-10,"d":"3.22E-10"},"full_name=peroxin 11c. peroxin 11c. member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.","AT3G14780",null,10.185,-6.9576,1.3678,-5.0868,{"v":3.64e-07,"d":"3.64E-07"},{"v":3.21e-06,"d":"3.21E-06"},"callose synthase."]
["AT3G45640","MPK3",223.38,-0.75309,0.16262,-4.631,{"v":3.64e-06,"d":"3.64E-06"},{"v":3.61e-05,"d":"3.61E-05"},"full_name=mitogen-activated protein kinase 3. mitogen-activated protein kinase 3. Encodes a mitogen-activated kinase whose mRNA levels increase in response to touch, cold, salinity stress and chitin oligomers.Also functions in ovule development. Heterozygous MPK3 mutants in a homozygous MPK6 background are female sterile due to defects in integument development. MPK3 can be dephosphorylated by MKP2 in vitro.","AT2G02390","GSTZ1",385.73,0.73885,0.14862,4.9716,{"v":6.64e-07,"d":"6.64E-07"},{"v":6.38e-06,"d":"6.38E-06"},"full_name=glutathione S-transferase zeta 1. glutathione S-transferase zeta 1. Encodes glutathione transferase belonging to the zeta class of GSTs. Naming convention according to Wagner et al. (2002). The protein undergoes spontaneous thiolation following treatment with the oxidant tert-butylhydroperoxide. It functions in vitro as a maleylacetoacetate isomerase and is likely to be involved in tyrosine catabolism.","AT2G14530","TBL13",199.64,0.9977,0.17189,5.8042,{"v":6.47e-09,"d":"6.47E-09"},{"v":6.03e-08,"d":"6.03E-08"},"full_name=TRICHOME BIREFRINGENCE-LIKE 13. TRICHOME BIREFRINGENCE-LIKE 13. Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT1G01470","LEA14",2979.9,0.74104,0.11221,6.6042,{"v":4e-11,"d":"4.00E-11"},{"v":3.6E-10,"d":"3.60E-10"},"full_name=LATE EMBRYOGENESIS ABUNDANT 14. Late embryogenesis abundant protein. Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against dessication.","AT3G10572","APEM9",169.94,0.91815,0.18084,5.0771,{"v":3.83e-07,"d":"3.83E-07"},{"v":3.37e-06,"d":"3.37E-06"},"full_name=ABERRANT PEROXISOME MORPHOLOGY 9. 3-phosphoinositide-dependent protein kinase-1. APEM9 is required for both PTS1- and PTS2-dependent protein transport. APEM9 interacts with PEX6 in BiFC assay and mating-based Split ubiquitin system. BiFC data shows that APEM9 is required for peroxisomal localization of PEX1-PEX6 complex. These results indicate that APEM9 functions like mammalian PEX26 and yeast PEX15."]
["AT2G18915","LKP2",235.83,0.69766,0.15084,4.6251,{"v":3.74e-06,"d":"3.74E-06"},{"v":3.7e-05,"d":"3.70E-05"},"full_name=LOV KELCH protein 2. LOV KELCH protein 2. encodes a member of F-box proteins that includes two other proteins in Arabidopsis (ZTL and FKF1). These proteins contain a unique structure containing a PAS domain at their N-terminus, an F-box motif, and 6 kelch repeats at their C-terminus. Overexpression results in arrhythmic phenotypes for a number of circadian clock outputs in both constant light and constant darkness, long hypocotyls under multiple fluences of both red and blue light, and a loss of photoperiodic control of flowering time. Although this the expression of this gene itself is not regulated by circadian clock, it physically interacts with Dof transcription factors that are transcriptionally regulated by circadian rhythm. LKP2 interacts with Di19, CO/COL family proteins.","AT1G11730",null,15.445,-3.8723,0.78009,-4.9639,{"v":6.91e-07,"d":"6.91E-07"},{"v":6.62e-06,"d":"6.62E-06"},"Galactosyltransferase family protein.","AT1G67340",null,242.96,0.92054,0.15896,5.7912,{"v":6.99e-09,"d":"6.99E-09"},{"v":6.49e-08,"d":"6.49E-08"},"HCP-like superfamily protein with MYND-type zinc finger.","AT3G23990","HSP60",779.34,0.64812,0.098287,6.5942,{"v":4.28e-11,"d":"4.28E-11"},{"v":3.84e-10,"d":"3.84E-10"},"full_name=heat shock protein 60. heat shock protein 60. mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria.","AT3G54910",null,119.22,-1.1359,0.22433,-5.0633,{"v":4.12e-07,"d":"4.12E-07"},{"v":3.61e-06,"d":"3.61E-06"},"RNI-like superfamily protein."]
["AT2G40820",null,442.19,-0.56548,0.12261,-4.612,{"v":3.99e-06,"d":"3.99E-06"},{"v":3.93E-5,"d":"3.93E-05"},"stomatal closure actin-binding-like protein.","AT1G80010","FRS8",310.82,0.67032,0.13521,4.9575,{"v":7.14e-07,"d":"7.14E-07"},{"v":6.82e-06,"d":"6.82E-06"},"full_name=FAR1-related sequence 8. FAR1-related sequence 8.","AT2G35120",null,574.45,0.77301,0.13378,5.7781,{"v":7.56e-09,"d":"7.56E-09"},{"v":7e-08,"d":"7.00E-08"},"Single hybrid motif superfamily protein.","AT1G14010",null,88.09,-1.8084,0.27476,-6.5818,{"v":4.65e-11,"d":"4.65E-11"},{"v":4.16e-10,"d":"4.16E-10"},"emp24/gp25L/p24 family/GOLD family protein.","AT2G38260",null,259.8,-1.1107,0.21965,-5.0565,{"v":4.27E-7,"d":"4.27E-07"},{"v":3.72E-6,"d":"3.72E-06"},"pseudogene."]
["AT5G04740","ACR12",236.58,-0.70308,0.15276,-4.6026,{"v":4.17e-06,"d":"4.17E-06"},{"v":4.1E-5,"d":"4.10E-05"},"full_name=ACT domain repeats 12. ACT domain-containing protein. Encodes a ACT domain-containing protein. The ACT domain, named after bacterial aspartate kinase, chorismate mutase and TyrA (prephenate dehydrogenase), is a regulatory domain that serves as an amino acid-binding site in feedback-regulated amino acid metabolic enzymes.","AT1G10850",null,38.954,-1.7356,0.35057,-4.9509,{"v":7.39e-07,"d":"7.39E-07"},{"v":7.04e-06,"d":"7.04E-06"},"Leucine-rich repeat protein kinase family protein.","AT5G19730",null,121.64,-1.2376,0.21432,-5.7744,{"v":7.72e-09,"d":"7.72E-09"},{"v":7.13e-08,"d":"7.13E-08"},"Pectin lyase-like superfamily protein.","AT3G48870","HSP93-III",454.79,0.86969,0.13228,6.5744,4.89E-11,{"v":4.36e-10,"d":"4.36E-10"},"Clp ATPase. Encodes a nuclear encoded protein with similarity to Clpa regulatory subunit of CLP protease complex. The protein is localized to the chloroplast stroma. May function redundantly with TIC complex in chloroplast protein import.","AT5G22030","UBP8",98.305,1.1047,0.21893,5.0461,{"v":4.51E-7,"d":"4.51E-07"},{"v":3.92e-06,"d":"3.92E-06"},"full_name=ubiquitin-specific protease 8. ubiquitin-specific protease 8."]
["AT3G26060","PRXQ",1627.8,-0.48106,0.10477,-4.5915,{"v":4.4e-06,"d":"4.40E-06"},{"v":4.32E-5,"d":"4.32E-05"},"full_name=peroxiredoxin Q. Thioredoxin superfamily protein. encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus","AT5G04895","ABO6",70.62,1.3369,0.27066,4.9392,{"v":7.84e-07,"d":"7.84E-07"},{"v":7.45e-06,"d":"7.45E-06"},"full_name=ABA overly sensitive 6. DEA(D/H)-box RNA helicase family protein.","AT5G66460","MAN7",107.41,-1.4406,0.24967,-5.7702,{"v":7.92e-09,"d":"7.92E-09"},{"v":7.29e-08,"d":"7.29E-08"},"full_name=endo-beta-mannase 7. Glycosyl hydrolase superfamily protein. Encodes a endo-beta-mannanase involved in seed germination.","AT5G08260","scpl35",134.71,2.4663,0.37561,6.5662,{"v":5.16e-11,"d":"5.16E-11"},{"v":4.59e-10,"d":"4.59E-10"},"full_name=serine carboxypeptidase-like 35. serine carboxypeptidase-like 35.","AT1G17147",null,39.986,1.8685,0.37067,5.041,{"v":4.63E-7,"d":"4.63E-07"},{"v":4.02e-06,"d":"4.02E-06"},"VQ motif-containing protein."]
["AT3G17360","POK1",7.1716,-6.2334,1.3594,-4.5854,{"v":4.53e-06,"d":"4.53E-06"},{"v":4.43e-05,"d":"4.43E-05"},"full_name=phragmoplast orienting kinesin 1. phragmoplast orienting kinesin 1. PHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls.","AT5G05220",null,33.085,1.9057,0.38618,4.9349,{"v":8.02e-07,"d":"8.02E-07"},{"v":7.59e-06,"d":"7.59E-06"},"hypothetical protein.","AT5G42390","SPP",821.04,0.72859,0.12637,5.7653,{"v":8.15e-09,"d":"8.15E-09"},{"v":7.48e-08,"d":"7.48E-08"},"full_name=stromal processing peptidase. Insulinase (Peptidase family M16) family protein. Encodes a chloroplast-localized metalloprotease that is essential for embryo development. Mutants do not progress normally beyond the 16-cell stage.","AT5G67370","CGLD27",156.02,-1.1718,0.17863,-6.5597,{"v":5.39e-11,"d":"5.39E-11"},4.78E-10,"full_name=CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27. DUF1230 family protein (DUF1230).","AT1G73920",null,212.16,0.80651,0.16023,5.0333,{"v":4.82E-7,"d":"4.82E-07"},{"v":4.17e-06,"d":"4.17E-06"},"alpha/beta-Hydrolases superfamily protein."]
["AT2G41340","RPB5D",391.79,-0.59694,0.13028,-4.5819,{"v":4.61e-06,"d":"4.61E-06"},{"v":4.49E-5,"d":"4.49E-05"},"full_name=RNA polymerase II fifth largest subunit, D. RNA polymerase II fifth largest subunit, D. NRPE5-like protein of unknown function; homologous to budding yeast RPB5","AT1G25350","OVA9",1279.4,-0.47254,0.095864,-4.9293,{"v":8.25e-07,"d":"8.25E-07"},{"v":7.79E-6,"d":"7.79E-06"},"full_name=ovule abortion 9. glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS.","AT5G15490","UGD3",223.8,-1.0002,0.17379,-5.7551,{"v":8.66e-09,"d":"8.66E-09"},{"v":7.93e-08,"d":"7.93E-08"},"full_name=UDP-glucose dehydrogenase 3. UDP-glucose 6-dehydrogenase family protein. Encodes one of four UDP-glucose dehydrogenase UGD) genes. Mutation of this gene in combination with UGD2 leads to swollen plant cell walls and severe developmental defects associated with changes in pectic polysaccharides.","AT1G33680",null,507.95,0.82733,0.12626,6.5524,{"v":5.66e-11,"d":"5.66E-11"},{"v":5.01e-10,"d":"5.01E-10"},"KH domain-containing protein.","AT3G18035","HON4",941.9,-0.80056,0.15915,-5.0303,{"v":4.9e-07,"d":"4.90E-07"},{"v":4.22e-06,"d":"4.22E-06"},"winged-helix DNA-binding transcription factor family protein. A linker histone like protein"]
["AT1G14720","XTH28",327.78,0.63723,0.13932,4.5738,{"v":4.79e-06,"d":"4.79E-06"},{"v":4.65e-05,"d":"4.65E-05"},"full_name=xyloglucan endotransglucosylase/hydrolase 28. xyloglucan endotransglucosylase/hydrolase 28. member of Glycoside Hydrolase Family 16","AT4G13210",null,16.785,-5.6024,1.1386,-4.9205,{"v":8.63e-07,"d":"8.63E-07"},{"v":8.12e-06,"d":"8.12E-06"},"Pectin lyase-like superfamily protein.","AT1G23010","LPR1",292.43,-0.82124,0.14285,-5.7489,{"v":8.98E-9,"d":"8.98E-09"},{"v":8.19e-08,"d":"8.19E-08"},"full_name=Low Phosphate Root1. Cupredoxin superfamily protein. Encodes a protein with multicopper oxidase activity. Located in ER. Function together with LPR2 (AT1G71040) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability.","AT2G29140","PUM3",1627.3,0.57527,0.087938,6.5418,{"v":6.08e-11,"d":"6.08E-11"},{"v":5.36e-10,"d":"5.36E-10"},"full_name=pumilio 3. pumilio 3. Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.","AT4G03520","ATHM2",453.99,-0.55622,0.11084,-5.0181,{"v":5.22e-07,"d":"5.22E-07"},{"v":4.48e-06,"d":"4.48E-06"},"Thioredoxin superfamily protein. Encodes a redox activated co-chaperone, chloroplast localized thioredoxin, similar to prokaryotic types."]
["AT5G39860","PRE1",6.9617,-6.1866,1.3534,-4.5711,{"v":4.85e-06,"d":"4.85E-06"},{"v":4.7e-05,"d":"4.70E-05"},"full_name=PACLOBUTRAZOL RESISTANCE1. basic helix-loop-helix (bHLH) DNA-binding family protein. Encodes PRE1 (PACLOBUTRAZOL RESISTANCE1). PRE1 and IBH1 form a pair of antagonistic HLH/bHLH transcription factors that function downstream of BZR1 to mediate brassinosteroid regulation of cell elongation. BNQ1 is directly and negatively regulated by AP3 and PI in petals.Required for appropriate regulation of flowering time.","AT4G26200","ACS7",781.35,0.69174,0.14081,4.9126,{"v":8.99e-07,"d":"8.99E-07"},{"v":8.43e-06,"d":"8.43E-06"},"full_name=1-amino-cyclopropane-1-carboxylate synthase 7. 1-amino-cyclopropane-1-carboxylate synthase 7. Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.","AT1G33560","ADR1",47.283,-2.0709,0.36046,-5.7453,{"v":9.17e-09,"d":"9.17E-09"},{"v":8.34e-08,"d":"8.34E-08"},"full_name=ACTIVATED DISEASE RESISTANCE 1. Disease resistance protein (CC-NBS-LRR class) family. Encodes a NBS-LRR disease resistance protein that possesses N-terminal kinase subdomains. Activation tagged mutant of ADR1 showed elevated levels of SA and reactive oxygen species in addition to number of defense gene transcripts. Exhibits resistance to number of microbial pathogens.","AT4G17560",null,36.281,2.7197,0.41629,6.5332,{"v":6.44e-11,"d":"6.44E-11"},{"v":5.66e-10,"d":"5.66E-10"},"Ribosomal protein L19 family protein.","AT4G27230","HTA2",83.207,-1.1865,0.23678,-5.011,{"v":5.41e-07,"d":"5.41E-07"},{"v":4.64e-06,"d":"4.64E-06"},"full_name=histone H2A 2. histone H2A 2. Encodes HTA2, a histone H2A protein."]
["AT2G33450","PRPL28",322.22,-0.63187,0.1384,-4.5656,{"v":4.98e-06,"d":"4.98E-06"},{"v":4.81e-05,"d":"4.81E-05"},"full_name=plastid ribosomal protein L28. Ribosomal L28 family.","AT2G02130","LCR68",255.61,-0.7729,0.15746,-4.9086,{"v":9.17e-07,"d":"9.17E-07"},{"v":8.58e-06,"d":"8.58E-06"},"full_name=low-molecular-weight cysteine-rich 68. low-molecular-weight cysteine-rich 68. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","AT5G20510","AL5",266.09,0.85332,0.14887,5.732,{"v":9.93e-09,"d":"9.93E-09"},{"v":9e-08,"d":"9.00E-08"},"full_name=alfin-like 5. alfin-like 5. Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7).","AT1G53050",null,242.64,-0.98143,0.15044,-6.5235,{"v":6.87e-11,"d":"6.87E-11"},{"v":6.02e-10,"d":"6.02E-10"},"Protein kinase superfamily protein.","AT4G20150",null,548.11,-0.56985,0.11381,-5.0071,{"v":5.52e-07,"d":"5.52E-07"},{"v":4.72e-06,"d":"4.72E-06"},"excitatory amino acid transporter."]
["AT1G08980","AMI1",109.95,-1.2043,0.26387,-4.5641,{"v":5.02e-06,"d":"5.02E-06"},{"v":4.84e-05,"d":"4.84E-05"},"full_name=amidase 1. amidase 1. Encodes an enzyme with similarity to bacterial acylamidohydrolases and exhibits indole-3-acetamide amidohydrolase activity in vitro. This enzyme may be involved in the in vivo biosynthesis of indole-acetic acid from indole-3-acetamide, a native metabolite of A. thaliana. It appears to exist as a monomer.","AT4G12650","TMN12",1154,-0.45458,0.092611,-4.9085,{"v":9.18e-07,"d":"9.18E-07"},{"v":8.58e-06,"d":"8.58E-06"},"Endomembrane protein 70 protein family.","AT5G57130","SMXL5",24.635,-2.9746,0.51903,-5.7311,{"v":9.98e-09,"d":"9.98E-09"},{"v":9.04e-08,"d":"9.04E-08"},"Clp amino terminal domain-containing protein. Encodes a member of an eight-gene family (SMAX1 and SMAX1-like) that has weak similarity to AtHSP101, a ClpB chaperonin required for thermotolerance.","AT2G18440","GUT15",3474.1,0.88335,0.13541,6.5233,{"v":6.88e-11,"d":"6.88E-11"},{"v":6.02e-10,"d":"6.02E-10"},"other_RNA. Encodes a noncoding RNA, a member of an emerging class of transcripts that lack significant open reading frames and encode RNA as their final product.","AT3G45590","SEN1",134.78,1.0036,0.20055,5.0045,{"v":5.6e-07,"d":"5.60E-07"},{"v":4.78E-6,"d":"4.78E-06"},"full_name=splicing endonuclease 1. splicing endonuclease 1. Encodes a catalytic subunit of tRNA splicing endonuclease."]
["AT5G51040","SDHAF2",962.43,0.52483,0.11513,4.5586,{"v":5.15e-06,"d":"5.15E-06"},{"v":4.96e-05,"d":"4.96E-05"},"full_name=Succinate dehydrogenase assembly factor 2. succinate dehydrogenase assembly factor. Encodes succinate dehydrogenase assembly factor 2 (SDHAF2), a low abundance mitochondrial protein needed for assembly and activity of mitochondrial complex II and for normal root elongation.","AT2G31400","GUN1",418.56,0.64296,0.13107,4.9055,{"v":9.32e-07,"d":"9.32E-07"},{"v":8.69e-06,"d":"8.69E-06"},"full_name=genomes uncoupled 1. s uncoupled 1. Encodes a a chloroplast-localized pentatricopeptide-repeat protein involved in regulation of nuclear gene expression.","AT1G53040",null,79.702,-1.529,0.26692,-5.7282,{"v":1.02E-8,"d":"1.02E-08"},{"v":9.18e-08,"d":"9.18E-08"},"tRNA (met) cytidine acetyltransferase, putative (DUF616).","AT2G36720",null,450.24,0.76568,0.11772,6.504,{"v":7.82e-11,"d":"7.82E-11"},{"v":6.84e-10,"d":"6.84E-10"},"Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein.","AT3G43690",null,192.16,-0.8158,0.16332,-4.9952,{"v":5.88e-07,"d":"5.88E-07"},{"v":5.01e-06,"d":"5.01E-06"},"transposable_element_gene."]
["AT4G36280","CRH1",657.05,-0.52592,0.11565,-4.5473,{"v":5.43e-06,"d":"5.43E-06"},{"v":5.2e-05,"d":"5.20E-05"},"full_name=CRT1 Homologue 1. Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein.","AT1G62390","Phox2",462.85,0.59706,0.12187,4.8991,{"v":9.63e-07,"d":"9.63E-07"},{"v":8.93e-06,"d":"8.93E-06"},"full_name=Phox2. Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein. Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","AT3G22492",null,12.941,7.3191,1.281,5.7136,{"v":1.11E-8,"d":"1.11E-08"},{"v":9.95e-08,"d":"9.95E-08"},"pseudogene. pseudogene of prefoldin-related KE2 family protein","AT2G26060","emb1345",696.86,0.67036,0.1033,6.4896,{"v":8.6E-11,"d":"8.60E-11"},7.48E-10,"full_name=embryo defective 1345. Transducin/WD40 repeat-like superfamily protein. Encodes a homolog of the yeast Cytosolic Iron-sulfur protein Assembly protein CIA1.","AT4G28025",null,441.5,-0.53256,0.1068,-4.9865,{"v":6.15e-07,"d":"6.15E-07"},{"v":5.21e-06,"d":"5.21E-06"},"hypothetical protein."]
["AT5G40470",null,103.3,1.0378,0.22843,4.5434,{"v":5.53e-06,"d":"5.53E-06"},{"v":5.29e-05,"d":"5.29E-05"},"RNI-like superfamily protein.","AT1G20480",null,127.1,-0.93783,0.19147,-4.8979,{"v":9.68e-07,"d":"9.68E-07"},{"v":8.97e-06,"d":"8.97E-06"},"AMP-dependent synthetase and ligase family protein.","AT1G04620","HCAR",291.05,-0.8975,0.15713,-5.7118,{"v":1.12e-08,"d":"1.12E-08"},{"v":1e-07,"d":"1.00E-07"},"full_name=7-hydroxymethyl chlorophyll a (HMChl) reductase. coenzyme F420 hydrogenase family / dehydrogenase, beta subunit family. Encodes a 7-hydroxymethyl chlorophyll a reductase, an enzyme of the chlorophyll cycle that converts 7-hydroxymethyl chlorophyll a to chlorophyll a.","AT5G06320","NHL3",192.5,-1.9726,0.30398,-6.4893,{"v":8.62e-11,"d":"8.62E-11"},7.49E-10,"full_name=NDR1/HIN1-like 3. NDR1/HIN1-like 3. encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and Pseudomonas syringae pv. tomato DC3000. The gene product is localized to the plasma membrane.","AT3G06170",null,616.45,-0.53876,0.1081,-4.984,{"v":6.23e-07,"d":"6.23E-07"},{"v":5.27e-06,"d":"5.27E-06"},"Serinc-domain containing serine and sphingolipid biosynthesis protein."]
["AT5G23570","SGS3",339.59,-0.69905,0.15401,-4.539,{"v":5.65e-06,"d":"5.65E-06"},{"v":5.39e-05,"d":"5.39E-05"},"full_name=SUPPRESSOR OF GENE SILENCING 3. XS domain-containing protein / XS zinc finger domain-containing protein-like protein. Required for posttranscriptional gene silencing and natural virus resistance.SGS3 is a member of an 'unknown' protein family. Members of this family have predicted coiled coiled domains suggesting oligomerization and a potential zinc finger domain. Involved in the production of trans-acting siRNAs, through direct or indirect stabilization of cleavage fragments of the primary ta-siRNA transcript. Acts before RDR6 in this pathway.","AT4G20070","AAH",563.81,-0.57631,0.11774,-4.8947,{"v":9.85e-07,"d":"9.85E-07"},{"v":9.1e-06,"d":"9.10E-06"},"full_name=allantoate amidohydrolase. allantoate amidohydrolase. The gene encoding Arabidopsis thaliana Allantoate Amidohydrolase (AtAAH)which catalyzes the allantoate deiminase reaction (EC 3.5.3.9)is expressed in all parts of the plant being consistent with a function in purine turnover in Arabidopsis.","AT1G31800","CYP97A3",24.802,-3.4115,0.59762,-5.7084,{"v":1.14E-8,"d":"1.14E-08"},{"v":1.02E-7,"d":"1.02E-07"},"full_name=cytochrome P450, family 97, subfamily A, polypeptide 3. cytochrome P450, family 97, subfamily A, polypeptide 3. Encodes a protein with &#946;-ring carotenoid hydroxylase activity.","AT3G30180","BR6OX2",63.624,-2.2434,0.34611,-6.4817,{"v":9.07e-11,"d":"9.07E-11"},{"v":7.86e-10,"d":"7.86E-10"},"full_name=brassinosteroid-6-oxidase 2. brassinosteroid-6-oxidase 2. Encodes a cytochrome p450 enzyme that catalyzes the last reaction in the production of brassinolide. It is capable of converting 6-deoxocastasterone into castasterone, a C-6 oxidation, as well as the further conversion of castasterone into brassinolide by a Baeyer-Villinger oxidation reaction at C-6, resulting in the formation of an unusual seven-membered lactone ring. The enzyme possesses high affinity for both C28- and C27-Brassinosteroids. The expression of the gene using a CYP85A2 promoter:LUC fusion construct was shown to be under circadian and light control.","AT1G69350",null,48.325,1.59,0.31932,4.9795,{"v":6.38e-07,"d":"6.38E-07"},{"v":5.38e-06,"d":"5.38E-06"},"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT5G66080","APD9",11.875,5.1985,1.1481,4.528,{"v":5.95e-06,"d":"5.95E-06"},{"v":5.66E-5,"d":"5.66E-05"},"Protein phosphatase 2C family protein.","AT4G25070",null,279.44,-0.72739,0.14895,-4.8835,{"v":1.04E-6,"d":"1.04E-06"},{"v":9.6e-06,"d":"9.60E-06"},"caldesmon-like protein.","AT2G01570","RGA1",117,-1.2391,0.21741,-5.6993,{"v":1.2E-8,"d":"1.20E-08"},{"v":1.07e-07,"d":"1.07E-07"},"full_name=REPRESSOR OF GA1-3 1. GRAS family transcription factor family protein. Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.","AT4G32295","KIX9",147.49,-1.1891,0.18351,-6.4795,{"v":9.21e-11,"d":"9.21E-11"},{"v":7.95e-10,"d":"7.95E-10"},"histone acetyltransferase.","AT5G48340",null,135.93,-1.0236,0.2059,-4.9715,{"v":6.65e-07,"d":"6.65E-07"},{"v":5.59e-06,"d":"5.59E-06"},"hypothetical protein."]
["AT3G50240","KICP-02",355.08,-0.66748,0.14761,-4.5221,{"v":6.12e-06,"d":"6.12E-06"},{"v":5.81e-05,"d":"5.81E-05"},"ATP binding microtubule motor family protein. Encodes a kinesin-related protein.","AT3G52870",null,113.15,-0.97725,0.20036,-4.8775,{"v":1.07e-06,"d":"1.07E-06"},{"v":9.87e-06,"d":"9.87E-06"},"IQ calmodulin-binding motif family protein.","AT5G17570",null,194.28,1.0193,0.17912,5.6905,{"v":1.27E-8,"d":"1.27E-08"},{"v":1.13e-07,"d":"1.13E-07"},"TatD related DNase.","AT2G37970","SOUL-1",2866,0.64176,0.099288,6.4636,1.02E-10,{"v":8.8e-10,"d":"8.80E-10"},"SOUL heme-binding family protein.","AT5G58420",null,756.15,0.51364,0.10344,4.9654,{"v":6.86e-07,"d":"6.86E-07"},{"v":5.75E-6,"d":"5.75E-06"},"Ribosomal protein S4 (RPS4A) family protein."]
["AT4G34320",null,67.985,1.1585,0.25635,4.5191,{"v":6.21e-06,"d":"6.21E-06"},{"v":5.87e-05,"d":"5.87E-05"},"transmembrane protein, putative (DUF677).","AT1G80830","NRAMP1",258.62,-0.74661,0.15321,-4.8731,{"v":1.1e-06,"d":"1.10E-06"},{"v":1.01E-5,"d":"1.01E-05"},"full_name=natural resistance-associated macrophage protein 1. natural resistance-associated macrophage protein 1. Thought to be involved in iron homeostasis. Induced in leaves in response to iron deficiency. Transgenic plants accumulate toxic levels of iron. Gene complements yeast iron uptake mutants.","AT2G41390",null,4985.1,-2.0091,0.35353,-5.683,{"v":1.32e-08,"d":"1.32E-08"},{"v":1.18E-7,"d":"1.18E-07"},"Pollen Ole e 1 allergen and extensin family protein.","AT2G31960","GSL03",748.4,-0.73236,0.11343,-6.4563,{"v":1.07e-10,"d":"1.07E-10"},{"v":9.21e-10,"d":"9.21E-10"},"full_name=glucan synthase-like 3. glucan synthase-like 3. encodes a protein similar to callose synthase","AT5G19540","DY1",736.67,-0.437,0.088146,-4.9576,{"v":7.14e-07,"d":"7.14E-07"},{"v":5.97e-06,"d":"5.97E-06"},"thermosome subunit gamma."]
["AT1G12050","FAH",387.49,-0.55719,0.1235,-4.5118,{"v":6.43e-06,"d":"6.43E-06"},{"v":6.06e-05,"d":"6.06E-05"},"fumarylacetoacetase. Encodes a fumarylacetoacetase that converts fumarylacetoacetate to acetoacetate and fumarate and is likely to be involved in tyrosine catabolism.","AT1G01500",null,256.85,0.69474,0.14296,4.8598,{"v":1.17E-6,"d":"1.17E-06"},{"v":1.07e-05,"d":"1.07E-05"},"Erythronate-4-phosphate dehydrogenase family protein.","AT1G10120","CIB4",79.114,-1.4596,0.25722,-5.6746,{"v":1.39E-8,"d":"1.39E-08"},{"v":1.23E-7,"d":"1.23E-07"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT2G34355",null,205.25,1.026,0.15933,6.4394,{"v":1.2E-10,"d":"1.20E-10"},{"v":1.03E-9,"d":"1.03E-09"},"Major facilitator superfamily protein.","AT3G53280","CYP71B5",169.7,0.82238,0.16638,4.9429,{"v":7.7e-07,"d":"7.70E-07"},{"v":6.41e-06,"d":"6.41E-06"},"full_name=cytochrome p450 71b5. cytochrome p450 71b5. cytochrome P450 monooxygenase"]
["AT1G67300",null,791.88,0.46544,0.10319,4.5106,{"v":6.46E-6,"d":"6.46E-06"},{"v":6.08e-05,"d":"6.08E-05"},"Major facilitator superfamily protein.","AT4G32410","CESA1",2048.3,-0.45239,0.093195,-4.8542,{"v":1.21e-06,"d":"1.21E-06"},{"v":1.1E-5,"d":"1.10E-05"},"full_name=cellulose synthase 1. cellulose synthase 1. Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.","AT3G23820","GAE6",52.344,-1.7627,0.31127,-5.6629,{"v":1.49e-08,"d":"1.49E-08"},{"v":1.31E-7,"d":"1.31E-07"},"full_name=UDP-D-glucuronate 4-epimerase 6. UDP-D-glucuronate 4-epimerase 6. UDP-D-glucuronate 4-epimerase","AT5G60870","RUG3",150.27,1.1878,0.18479,6.4278,{"v":1.3e-10,"d":"1.30E-10"},{"v":1.11e-09,"d":"1.11E-09"},"full_name=RCC1/UVR8/GEF-like 3. Regulator of chromosome condensation (RCC1) family protein. Encodes a mitochondrial protein RUG3 that is required for accumulation of mitochondrial respiratory chain complex I. RUG3 is related to human REGULATOR OF CHROMOSOME CONDENSATION 1 (RCC1) and Arabidopsis UV-B RESISTANCE 8 (UVR8).","AT3G03380","DEG7",466.49,0.54449,0.11035,4.9342,{"v":8.05e-07,"d":"8.05E-07"},{"v":6.69e-06,"d":"6.69E-06"},"full_name=degradation of periplasmic proteins 7. DegP protease 7. Encodes a putative DegP protease."]
["AT5G18400","DRE2",275.51,0.6588,0.14619,4.5065,{"v":6.59e-06,"d":"6.59E-06"},{"v":6.18e-05,"d":"6.18E-05"},"Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesi.","AT3G02110","scpl25",32.631,-2.0394,0.4207,-4.8477,{"v":1.25e-06,"d":"1.25E-06"},{"v":1.13E-5,"d":"1.13E-05"},"full_name=serine carboxypeptidase-like 25. serine carboxypeptidase-like 25.","AT1G64090","RTNLB3",112.54,-1.2983,0.22946,-5.6581,{"v":1.53e-08,"d":"1.53E-08"},{"v":1.35E-7,"d":"1.35E-07"},"full_name=Reticulan like protein B3. Reticulan like protein B3.","AT4G25000","AMY1",21.415,-8.0318,1.2525,-6.4127,1.43E-10,{"v":1.22e-09,"d":"1.22E-09"},"full_name=alpha-amylase-like. alpha-amylase-like protein. Predicted to be secreted protein based on signalP prediction. Involved in starch mobilization. Mutants are defective in alpha-amylase activity. (Note: AMY1 has been found in the literature to be referred to as AMY3, which is not to be confused with AMY3/At1g69830).","AT1G72830","NF-YA3",254.89,-0.6911,0.14018,-4.9302,{"v":8.22e-07,"d":"8.22E-07"},{"v":6.82e-06,"d":"6.82E-06"},"full_name=nuclear factor Y, subunit A3. nuclear factor Y, subunit A3. Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues. Expression is upregulated in the shoot of cax1/cax3 mutant."]
["AT5G46540","ABCB7",45.518,-1.5073,0.33537,-4.4943,{"v":6.98e-06,"d":"6.98E-06"},{"v":6.52e-05,"d":"6.52E-05"},"full_name=ATP-binding cassette B7. P-glycoprotein 7.","AT5G01020","PBL8",358.01,-0.64645,0.13349,-4.8427,{"v":1.28E-6,"d":"1.28E-06"},{"v":1.16e-05,"d":"1.16E-05"},"Protein kinase superfamily protein.","AT1G02205","CER1",20.029,-3.876,0.68594,-5.6507,{"v":1.6e-08,"d":"1.60E-08"},{"v":1.4e-07,"d":"1.40E-07"},"full_name=ECERIFERUM 1. Fatty acid hydroxylase superfamily. Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.","AT3G47520","MDH",325.71,-0.94436,0.1475,-6.4024,{"v":1.53e-10,"d":"1.53E-10"},{"v":1.3e-09,"d":"1.30E-09"},"full_name=malate dehydrogenase. malate dehydrogenase. Encodes a protein with NAD-dependent malate dehydrogenase activity, located in chloroplasts.","AT1G15860",null,218.92,0.72395,0.147,4.9249,{"v":8.44e-07,"d":"8.44E-07"},{"v":6.98e-06,"d":"6.98E-06"},"defective in cullin neddylation protein (DUF298)."]
["AT1G73650",null,119.83,0.92441,0.20595,4.4885,{"v":7.17E-6,"d":"7.17E-06"},{"v":6.68e-05,"d":"6.68E-05"},"3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295).","AT5G10360","EMB3010",1685.3,-0.53886,0.11142,-4.8362,{"v":1.32e-06,"d":"1.32E-06"},{"v":1.2E-5,"d":"1.20E-05"},"full_name=embryo defective 3010. Ribosomal protein S6e. RPS6A and RPS6B are fully redundant and essential during gametogenesis.","AT3G13672","SINA2",59.301,-1.7742,0.31438,-5.6433,{"v":1.67e-08,"d":"1.67E-08"},{"v":1.46e-07,"d":"1.46E-07"},"TRAF-like superfamily protein.","AT5G47110","LIL3:2",132.1,1.2516,0.1958,6.392,1.64E-10,{"v":1.39E-9,"d":"1.39E-09"},"Chlorophyll A-B binding family protein.","AT5G15080","PBL34",294.35,0.65931,0.13406,4.9181,{"v":8.74e-07,"d":"8.74E-07"},{"v":7.21e-06,"d":"7.21E-06"},"Protein kinase superfamily protein."]
["AT5G06940",null,19.829,-2.3327,0.51978,-4.4879,{"v":7.19e-06,"d":"7.19E-06"},{"v":6.7e-05,"d":"6.70E-05"},"Leucine-rich repeat receptor-like protein kinase family protein.","AT3G17160",null,482.68,-0.58742,0.12148,-4.8353,{"v":1.33E-6,"d":"1.33E-06"},{"v":1.2E-5,"d":"1.20E-05"},"hypothetical protein.","AT5G11970",null,381.32,0.88264,0.15641,5.6431,{"v":1.67e-08,"d":"1.67E-08"},{"v":1.46e-07,"d":"1.46E-07"},"ABC family ABC transporter, putative (DUF3511).","AT5G53990",null,69.5,-1.6589,0.25956,-6.3913,1.65E-10,{"v":1.39E-9,"d":"1.39E-09"},"UDP-Glycosyltransferase superfamily protein.","AT2G28840","XBAT31",101.12,1.2419,0.2526,4.9164,{"v":8.81e-07,"d":"8.81E-07"},{"v":7.27e-06,"d":"7.27E-06"},"full_name=XB3 ortholog 1 in Arabidopsis thaliana. hypothetical protein."]
["AT3G12203","scpl17",10734,-0.58063,0.12962,-4.4796,{"v":7.48e-06,"d":"7.48E-06"},{"v":6.95e-05,"d":"6.95E-05"},"full_name=serine carboxypeptidase-like 17. serine carboxypeptidase-like 17.","AT3G56340","RPS26E",505.39,-0.68282,0.14143,-4.8278,{"v":1.38e-06,"d":"1.38E-06"},{"v":1.24E-5,"d":"1.24E-05"},"Ribosomal protein S26e family protein.","AT5G36110","CYP716A1",15.301,-7.2058,1.2788,-5.6349,{"v":1.75e-08,"d":"1.75E-08"},{"v":1.53e-07,"d":"1.53E-07"},"full_name=cytochrome P450, family 716, subfamily A, polypeptide 1. cytochrome P450, family 716, subfamily A, polypeptide 1. member of CYP716A","AT4G12650","TMN12",341.58,-0.96212,0.15064,-6.387,{"v":1.69e-10,"d":"1.69E-10"},{"v":1.43E-9,"d":"1.43E-09"},"Endomembrane protein 70 protein family.","AT3G09770","LOG2",941.83,0.42185,0.085953,4.9079,{"v":9.2e-07,"d":"9.20E-07"},{"v":7.56e-06,"d":"7.56E-06"},"full_name=LOSS OF GDU 2. RING/U-box superfamily protein. Encodes a ubiquitin E3 ligase LOG2 (LOSS OF GDU2). Required for GLUTAMINE DUMPER1(GDU1)-induced amino secretion."]
["AT5G19060",null,43.861,1.4095,0.31527,4.4706,{"v":7.8e-06,"d":"7.80E-06"},{"v":7.23e-05,"d":"7.23E-05"},"cytochrome P450 family protein.","AT4G16680",null,134.18,1.0172,0.21099,4.8211,{"v":1.43e-06,"d":"1.43E-06"},{"v":1.28e-05,"d":"1.28E-05"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT2G36870","XTH32",14.656,-7.1442,1.2692,-5.6288,{"v":1.81E-8,"d":"1.81E-08"},{"v":1.58e-07,"d":"1.58E-07"},"full_name=xyloglucan endotransglucosylase/hydrolase 32. xyloglucan endotransglucosylase/hydrolase 32. Encodes a xyloglucan endotransglycosylase/hydrolase.","AT3G02720","DJ1D",315.93,-0.82743,0.12985,-6.3723,1.86E-10,{"v":1.57E-9,"d":"1.57E-09"},"Class I glutamine amidotransferase-like superfamily protein. Encodes a glyoxalase with high activity towards glyoxal and methylglyoxal. It differs from its animal and bacterial homologs with respect to the configuration of its catalytic residues and the oligomeric property of the enzyme.","AT3G23180",null,192.69,-0.80443,0.16415,-4.9005,{"v":9.56e-07,"d":"9.56E-07"},{"v":7.83e-06,"d":"7.83E-06"},"HR-like lesion-inducing protein-like protein."]
["AT2G47600","MHX",466.06,-0.54876,0.12294,-4.4636,{"v":8.06e-06,"d":"8.06E-06"},{"v":7.44e-05,"d":"7.44E-05"},"full_name=magnesium/proton exchanger. magnesium/proton exchanger. Encodes a magnesium/proton exchanger, member of putative Na+/Ca2+ antiporter gene family","AT3G29810","COBL2",735.71,0.56894,0.11816,4.8148,{"v":1.47e-06,"d":"1.47E-06"},{"v":1.32e-05,"d":"1.32E-05"},"full_name=COBRA-like protein 2 precursor. COBRA-like protein 2 precursor.","AT4G36180","MUL",14.713,-7.1583,1.2746,-5.6163,{"v":1.95e-08,"d":"1.95E-08"},{"v":1.69e-07,"d":"1.69E-07"},"Leucine-rich receptor-like protein kinase family protein.","AT5G67630","ISE4",297.52,0.84148,0.13237,6.3572,{"v":2.05e-10,"d":"2.05E-10"},{"v":1.72e-09,"d":"1.72E-09"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT5G46510","VICTL",128.46,-0.99635,0.20361,-4.8935,{"v":9.9e-07,"d":"9.90E-07"},{"v":8.09e-06,"d":"8.09E-06"},"Disease resistance protein (TIR-NBS-LRR class) family."]
["AT2G42890","ML2",687,0.53101,0.11924,4.4532,{"v":8.46e-06,"d":"8.46E-06"},{"v":7.79e-05,"d":"7.79E-05"},"full_name=MEI2-like 2. MEI2-like 2. A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML2 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. AML2 is expressed during early embryo development (heart and torpedo stage) and predominantly in vegetative organs; no significant accumulation was detected in floral apices.","AT3G58730","VHA-D",521.17,0.58693,0.122,4.8108,{"v":1.5E-6,"d":"1.50E-06"},{"v":1.34E-5,"d":"1.34E-05"},"vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD).","AT1G05620","URH2",151.7,-1.2385,0.2209,-5.6069,{"v":2.06e-08,"d":"2.06E-08"},{"v":1.78e-07,"d":"1.78E-07"},"full_name=uridine-ribohydrolase 2. uridine-ribohydrolase 2. Encodes a cytosolic inosine nucleoside hydrolase. Transcript levels for this gene are elevated in older leaves suggesting that it may play a role in purine catabolism during senescence.","AT5G11230","UAFT2",77.772,-1.6774,0.26417,-6.3498,2.16E-10,{"v":1.8E-9,"d":"1.80E-09"},"Nucleotide-sugar transporter family protein.","AT4G35840","ATL26",44.88,-1.8002,0.36826,-4.8884,{"v":1.02E-6,"d":"1.02E-06"},{"v":8.29e-06,"d":"8.29E-06"},"RING/U-box superfamily protein."]
["AT1G75760",null,395.4,-0.59691,0.13444,-4.44,{"v":9e-06,"d":"9.00E-06"},{"v":8.26e-05,"d":"8.26E-05"},"ER lumen protein retaining receptor family protein.","AT1G76400","OST1B",247.69,-0.69083,0.14374,-4.8063,{"v":1.54e-06,"d":"1.54E-06"},{"v":1.37e-05,"d":"1.37E-05"},"Ribophorin I.","AT4G34890","XDH1",1798.7,0.74963,0.1339,5.5987,{"v":2.16e-08,"d":"2.16E-08"},{"v":1.86E-7,"d":"1.86E-07"},"full_name=xanthine dehydrogenase 1. xanthine dehydrogenase 1. Encodes a xanthine dehydrogenase, involved in purine catabolism. Ubiquitously expressed, but the transcript level is altered during aging, senescence, salt and cold stress, ABA treatment, and dark treatment. RNAi lines that suppress both XDH1 and XDH2 produce small plants with reduced fertility and accelerated leaf senescence. Role in drought tolerance.","AT4G22850",null,33.725,-2.6497,0.41817,-6.3365,{"v":2.35e-10,"d":"2.35E-10"},{"v":1.96e-09,"d":"1.96E-09"},"SNARE associated Golgi protein family.","AT5G54300",null,2128.8,0.36711,0.075199,4.8818,{"v":1.05e-06,"d":"1.05E-06"},{"v":8.54e-06,"d":"8.54E-06"},"cotton fiber-like protein (DUF761)."]
["AT3G52230",null,1473.4,0.43783,0.098746,4.4338,{"v":9.26e-06,"d":"9.26E-06"},{"v":8.48e-05,"d":"8.48E-05"},"hypothetical protein.","AT1G16720","HCF173",575.08,-0.51465,0.10722,-4.8002,{"v":1.59E-6,"d":"1.59E-06"},{"v":1.41e-05,"d":"1.41E-05"},"full_name=high chlorophyll fluorescence phenotype 173. high chlorophyll fluorescence phenotype 173. Encodes HCF173, a protein with weak similarities to the superfamily of the short-chain dehydrogenases/reductases. HCF173 is involved in the initiation of translation of the psbA mRNA. Mutants shows a high chlorophyll fluorescence phenotype (hcf) and are severely affected in the accumulation of PSII subunits. The protein HCF173 is localized in the chloroplast, where it is mainly associated with the membrane system and is part of a higher molecular weight complex with psbA mRNA as a component of this complex.","AT3G14050","RSH2",598.27,0.78034,0.13967,5.5871,{"v":2.31e-08,"d":"2.31E-08"},{"v":1.99E-7,"d":"1.99E-07"},"full_name=RELA/SPOT homolog 2. RELA/SPOT homolog 2.","AT5G57655",null,1187.2,0.67444,0.10673,6.319,{"v":2.63e-10,"d":"2.63E-10"},{"v":2.19e-09,"d":"2.19E-09"},"xylose isomerase family protein.","AT2G03780",null,225.86,-0.73067,0.14998,-4.8717,{"v":1.11E-6,"d":"1.11E-06"},{"v":8.97e-06,"d":"8.97E-06"},"Translin family protein."]
["AT4G30920","LAP2",250.92,-0.63375,0.14308,-4.4292,{"v":9.46e-06,"d":"9.46E-06"},{"v":8.64e-05,"d":"8.64E-05"},"full_name=leucyl aminopeptidase 2. Cytosol aminopeptidase family protein. Encodes LAP2, an aminopeptidase playing key roles in senescence, stress response and amino acid turnover.","AT1G63480","AHL12",114.06,-1.0047,0.20957,-4.794,{"v":1.64E-6,"d":"1.64E-06"},{"v":1.45E-5,"d":"1.45E-05"},"AT hook motif DNA-binding family protein.","AT4G21910",null,60.609,-1.6169,0.28951,-5.5848,{"v":2.34e-08,"d":"2.34E-08"},{"v":2.01e-07,"d":"2.01E-07"},"MATE efflux family protein.","AT5G20230","BCB",51.878,-2.5033,0.39674,-6.3096,{"v":2.8e-10,"d":"2.80E-10"},{"v":2.32e-09,"d":"2.32E-09"},"full_name=blue-copper-binding protein. blue-copper-binding protein. Al-stress-induced gene","AT5G22330","RIN1",539.2,0.48321,0.09927,4.8677,{"v":1.13E-6,"d":"1.13E-06"},{"v":9.13e-06,"d":"9.13E-06"},"full_name=RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1. P-loop containing nucleoside triphosphate hydrolases superfamily protein."]
["AT3G54010","PAS1",673.54,-0.48866,0.11046,-4.4237,{"v":9.7e-06,"d":"9.70E-06"},{"v":8.83e-05,"d":"8.83E-05"},"full_name=PASTICCINO 1. FKBP-type peptidyl-prolyl cis-trans isomerase family protein. Immunophilin-like protein similar to the p59 FK506-binding protein (FKBP52). Shows rotamase activity and contains an FKBP-like domain and three tetratricopeptide repeat units. Members of this class of mutation show ectopic cell proliferation in cotyledons. Gene may be alternatively spliced. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","AT5G60760",null,3517.4,0.49763,0.10417,4.7771,{"v":1.78e-06,"d":"1.78E-06"},{"v":1.57e-05,"d":"1.57E-05"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT4G17100",null,49.864,-1.7742,0.31803,-5.5786,{"v":2.42e-08,"d":"2.42E-08"},{"v":2.07e-07,"d":"2.07E-07"},"poly(U)-specific endoribonuclease-B protein.","AT4G29010","AIM1",1985.9,0.53942,0.085647,6.2981,{"v":3.01e-10,"d":"3.01E-10"},{"v":2.49e-09,"d":"2.49E-09"},"full_name=ABNORMAL INFLORESCENCE MERISTEM. Enoyl-CoA hydratase/isomerase family. Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities","AT2G43090","IPMI SSU1",829.01,-0.43818,0.090259,-4.8547,{"v":1.21e-06,"d":"1.21E-06"},{"v":9.71e-06,"d":"9.71E-06"},"Aconitase/3-isopropylmalate dehydratase protein. One of three genes encoding the small subunit of isopropylmalate isomerase, a heterodimer consisting of a large and a small subunit. A function in both leucine biosynthesis and the first cycle of Met chain elongation has been demonstrated for this subunit."]
["AT3G50980","XERO1",344.15,1.0977,0.24852,4.417,{"v":1e-05,"d":"1.00E-05"},{"v":9.09E-5,"d":"9.09E-05"},"full_name=dehydrin xero 1. dehydrin xero 1.","AT1G48420","D-CDES",277.78,-0.67328,0.14108,-4.7724,{"v":1.82e-06,"d":"1.82E-06"},{"v":1.6e-05,"d":"1.60E-05"},"full_name=D-cysteine desulfhydrase. D-cysteine desulfhydrase. Encodes an enzyme that decomposes D-cysteine into pyruvate, H2S, and NH3. Only D-cysteine but not L-cysteine was converted by D-CDes to pyruvate, H2S, and NH3. There is conflicting evidence on its 1-aminocyclopropane-1-carboxylate deaminase activity. Involved in regulating ethylene levels.","AT4G22755",null,117.15,1.3181,0.23648,5.5737,{"v":2.49e-08,"d":"2.49E-08"},{"v":2.13e-07,"d":"2.13E-07"},"methylsterol monooxygenase 1-3.","AT4G24050",null,35.994,-3.0222,0.48036,-6.2915,3.14E-10,{"v":2.59e-09,"d":"2.59E-09"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT3G53410","LUL2",185.92,-0.78531,0.16188,-4.8511,{"v":1.23e-06,"d":"1.23E-06"},{"v":9.87e-06,"d":"9.87E-06"},"full_name=LOG2-LIKE UBIQUITIN LIGASE2. RING/U-box superfamily protein. Paralog of LOG2 (At3g09770), a ubiquitin ligase that regulates amino acid export."]
["AT3G14210","ESM1",36.097,-5.1438,1.1671,-4.4073,{"v":1.05e-05,"d":"1.05E-05"},{"v":9.48E-5,"d":"9.48E-05"},"full_name=epithiospecifier modifier 1. GDSL-like lipase/acylhydrolase superfamily protein. A semidominant QTL which has an epistatic effect on the Epithiospecifier gene. Represses nitrile formation and favors isothiocyanate production during glucosinolate hydrolysis. The functional allele deters the insect herbivory T. ni.","AT5G56850",null,19.616,-2.5195,0.52837,-4.7685,{"v":1.86E-6,"d":"1.86E-06"},{"v":1.63E-5,"d":"1.63E-05"},"hypothetical protein.","AT1G50010","TUA2",139.6,-1.2202,0.21916,-5.5677,{"v":2.58e-08,"d":"2.58E-08"},{"v":2.2e-07,"d":"2.20E-07"},"full_name=tubulin alpha-2 chain. tubulin alpha-2 chain. Encodes alpha-2,4 tubulin. TUA2 and TUA4 encode identical proteins.","AT1G26580",null,752.87,0.71835,0.11432,6.2838,{"v":3.3E-10,"d":"3.30E-10"},{"v":2.72e-09,"d":"2.72E-09"},"ELM2 domain protein.","AT5G41170",null,78.425,-1.2281,0.25366,-4.8414,{"v":1.29e-06,"d":"1.29E-06"},{"v":1.03E-5,"d":"1.03E-05"},"Pentatricopeptide repeat (PPR-like) superfamily protein."]
["AT1G09790","COBL6",126.33,1.062,0.24115,4.4037,{"v":1.06E-5,"d":"1.06E-05"},{"v":9.61e-05,"d":"9.61E-05"},"full_name=COBRA-like protein 6 precursor. COBRA-like protein 6 precursor.","AT1G68850",null,106.53,-1.0294,0.21617,-4.7619,{"v":1.92e-06,"d":"1.92E-06"},{"v":1.68e-05,"d":"1.68E-05"},"Peroxidase superfamily protein.","AT5G04770","CAT6",43.654,-2.6564,0.47812,-5.556,{"v":2.76e-08,"d":"2.76E-08"},{"v":2.34E-7,"d":"2.34E-07"},"full_name=cationic amino acid transporter 6. cationic amino acid transporter 6. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. Expressed in sink tissues. Induced during infestation of roots by the plant parasitic root-knot nematode, Meloidogyne incognita. Localized in the plasma membrane.","AT5G62610",null,183.62,-1.115,0.17761,-6.2777,3.44E-10,{"v":2.82e-09,"d":"2.82E-09"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT2G42030","MUSE2",555.77,0.4824,0.099826,4.8324,{"v":1.35E-6,"d":"1.35E-06"},{"v":1.08E-5,"d":"1.08E-05"},"RING/U-box superfamily protein."]
["AT5G04620","BIOF",243.97,-0.74848,0.17036,-4.3935,{"v":1.12e-05,"d":"1.12E-05"},{"v":1E-4,"d":"1.00E-04"},"full_name=biotin F. biotin F. The cDNA encoding 7-keto-8-aminopelargonic acid (KAPA) synthase, the first committed enzyme of the biotin synthesis pathway has been cloned and its molecular function confirmed (functional complementation of an E. coli mutant). The subcellular localization of the enzyme (cytosol) proves that the biotin biosynthesis in plants takes place in different compartments which differs from the biosynthetic route found in microorganisms.","AT5G18460",null,30.707,-1.9273,0.40565,-4.7512,{"v":2.02e-06,"d":"2.02E-06"},{"v":1.76e-05,"d":"1.76E-05"},"carboxyl-terminal peptidase (DUF239).","AT3G14760",null,19.853,-3.439,0.61981,-5.5485,{"v":2.88E-8,"d":"2.88E-08"},{"v":2.44e-07,"d":"2.44E-07"},"transmembrane protein.","AT5G56260",null,213.08,-0.98861,0.15757,-6.2742,{"v":3.51e-10,"d":"3.51E-10"},{"v":2.87e-09,"d":"2.87E-09"},"Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase.","AT2G45380",null,674.28,-0.47407,0.098223,-4.8264,{"v":1.39E-6,"d":"1.39E-06"},{"v":1.11E-5,"d":"1.11E-05"},"myeloid leukemia factor."]
["AT5G24915",null,17.793,-2.434,0.55402,-4.3933,{"v":1.12e-05,"d":"1.12E-05"},{"v":1.01E-4,"d":"1.01E-04"},"transposable_element_gene.","AT2G24150","HHP3",95.974,-1.0369,0.21829,-4.7499,{"v":2.03E-6,"d":"2.03E-06"},{"v":1.78e-05,"d":"1.78E-05"},"full_name=heptahelical protein 3. heptahelical protein 3. heptahelical transmembrane protein HHP3","AT5G02790","GSTL3",238.36,-0.8891,0.1603,-5.5464,{"v":2.92E-8,"d":"2.92E-08"},{"v":2.47e-07,"d":"2.47E-07"},"full_name=Glutathione transferase L3. Glutathione S-transferase family protein.","AT5G20045",null,25.201,-5.7908,0.9232,-6.2725,{"v":3.55e-10,"d":"3.55E-10"},{"v":2.9e-09,"d":"2.90E-09"},"transmembrane protein.","AT5G09990","PROPEP5",303.74,-0.67152,0.13918,-4.825,{"v":1.4e-06,"d":"1.40E-06"},{"v":1.12e-05,"d":"1.12E-05"},"full_name=elicitor peptide 5 precursor. elicitor peptide 5 precursor."]
["AT4G28410","RSA1",12.516,-3.4421,0.78424,-4.3891,{"v":1.14e-05,"d":"1.14E-05"},{"v":1.02E-4,"d":"1.02E-04"},"Tyrosine transaminase family protein.","AT4G36220","FAH1",1972.2,0.4792,0.10107,4.741,{"v":2.13e-06,"d":"2.13E-06"},{"v":1.85e-05,"d":"1.85E-05"},"full_name=ferulic acid 5-hydroxylase 1. ferulic acid 5-hydroxylase 1. encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.","AT5G39360","EDL2",145.41,-1.0884,0.19639,-5.5418,{"v":2.99e-08,"d":"2.99E-08"},{"v":2.53E-7,"d":"2.53E-07"},"full_name=EID1-like 2. EID1-like 2.","AT1G70070","EMB25",141.46,1.2233,0.19525,6.2655,{"v":3.72e-10,"d":"3.72E-10"},{"v":3.03e-09,"d":"3.03E-09"},"full_name=EMBRYO DEFECTIVE 25. DEAD/DEAH box helicase. Allelic to ISE2(increased size exclusion limit of plasmodesmata 2). Mutants maintain dilated plasmodesmata at the embryonic torpedo stage.","AT3G52490","SMXL3",44.168,1.6274,0.33774,4.8185,{"v":1.45e-06,"d":"1.45E-06"},{"v":1.15E-5,"d":"1.15E-05"},"Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein. Encodes a member of an eight-gene family (SMAX1 and SMAX1-like) that has weak similarity to AtHSP101, a ClpB chaperonin required for thermotolerance."]
["AT5G16840","BPA1",854.12,0.47041,0.10732,4.3833,{"v":1.17E-5,"d":"1.17E-05"},{"v":1.05E-4,"d":"1.05E-04"},"full_name=binding partner of acd11 1. binding partner of acd11 1.","AT3G06500","A/N-InvC",359.56,-0.63272,0.1336,-4.736,{"v":2.18e-06,"d":"2.18E-06"},{"v":1.89e-05,"d":"1.89E-05"},"full_name=alkaline/neutral invertase C. Plant neutral invertase family protein. Encodes an alkaline/neutral invertase which localizes in mitochondria. It may be modulating hormone balance in relation to the radicle emergence. Mutants display severely reduced shoot growth and reduced oxygen consumption. Mutant root development is not affected as reported for A/N-InvA mutant (inva) plants.","AT5G16110",null,350.96,-0.94771,0.17122,-5.535,{"v":3.11e-08,"d":"3.11E-08"},{"v":2.62e-07,"d":"2.62E-07"},"hypothetical protein.","AT2G43520","TI2",205.1,-1.1757,0.18805,-6.252,4.05E-10,{"v":3.3e-09,"d":"3.30E-09"},"full_name=trypsin inhibitor protein 2. trypsin inhibitor protein 2. Encodes putative trypsin inhibitor protein which may function in defense against herbivory. Member of the defensin-like (DEFL) family.","AT2G20420",null,424.72,0.5439,0.11291,4.817,{"v":1.46E-6,"d":"1.46E-06"},{"v":1.15E-5,"d":"1.15E-05"},"ATP citrate lyase (ACL) family protein."]
["AT5G19172",null,6.2161,6.1526,1.4061,4.3756,{"v":1.21e-05,"d":"1.21E-05"},{"v":1.08E-4,"d":"1.08E-04"},"Cysteine-rich protein. Encodes a defensin-like (DEFL) family protein.","AT4G31140",null,44.342,1.5452,0.32684,4.7279,{"v":2.27e-06,"d":"2.27E-06"},{"v":1.96e-05,"d":"1.96E-05"},"O-Glycosyl hydrolases family 17 protein.","AT5G16290","VAT1",28.159,-2.6128,0.473,-5.5238,{"v":3.32E-8,"d":"3.32E-08"},{"v":2.78e-07,"d":"2.78E-07"},"full_name=VALINE-TOLERANT 1. VALINE-TOLERANT 1. Encodes a regulatory subunit of acetohydroxy acid synthase (AHAS), the &#64257;rst committed enzyme in the branched chain amino acid biosynthesis pathway.","AT1G73850",null,19.774,-7.9141,1.2686,-6.2386,{"v":4.42e-10,"d":"4.42E-10"},{"v":3.58E-9,"d":"3.58E-09"},"DNA ligase (DUF1666).","AT5G18255",null,347.1,0.58069,0.12067,4.8121,{"v":1.49e-06,"d":"1.49E-06"},{"v":1.18e-05,"d":"1.18E-05"},"Natural antisense transcript overlaps with AT5G18260. Potential natural antisense gene, locus overlaps with AT5G18260 Natural antisense transcript overlaps with AT5G18260"]
["AT1G76390","PUB43",155.85,0.77,0.17615,4.3711,{"v":1.24E-5,"d":"1.24E-05"},{"v":1.1E-4,"d":"1.10E-04"},"full_name=plant U-box 43. ARM repeat superfamily protein.","AT5G20500",null,350.95,-0.62669,0.13279,-4.7194,{"v":2.37e-06,"d":"2.37E-06"},{"v":2.04e-05,"d":"2.04E-05"},"Glutaredoxin family protein.","AT4G26760","MAP65-2",13.544,-7.0319,1.2744,-5.5178,{"v":3.43e-08,"d":"3.43E-08"},{"v":2.87e-07,"d":"2.87E-07"},"full_name=microtubule-associated protein 65-2. microtubule-associated protein 65-2.","AT4G27260","WES1",24.935,-3.3398,0.53661,-6.224,{"v":4.85e-10,"d":"4.85E-10"},{"v":3.92e-09,"d":"3.92E-09"},"Auxin-responsive GH3 family protein. encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin. It is involved in camalexin biosynthesis via conjugating indole-3-carboxylic acid (ICA) and cysteine (Cys).","AT2G48100",null,752.7,0.43847,0.091252,4.805,{"v":1.55E-6,"d":"1.55E-06"},{"v":1.22E-5,"d":"1.22E-05"},"Exonuclease family protein."]
["AT2G44080","ARL",118.35,0.93323,0.21371,4.3667,{"v":1.26E-5,"d":"1.26E-05"},{"v":1.12E-4,"d":"1.12E-04"},"full_name=ARGOS-like. ARGOS-like protein. Encodes ARL, a gene similar to ARGOS involved in cell expansion-dependent organ growth. Upregulated by brassinosteroid. Acts downstream of BRI1.","AT5G13520",null,90.837,-1.0621,0.22532,-4.7137,{"v":2.43E-6,"d":"2.43E-06"},{"v":2.09E-5,"d":"2.09E-05"},"peptidase M1 family protein.","AT5G59690",null,163.97,0.94064,0.17066,5.5119,{"v":3.55E-8,"d":"3.55E-08"},{"v":2.96E-7,"d":"2.96E-07"},"Histone superfamily protein.","AT1G28340","RLP4",368.19,-0.77823,0.12514,-6.219,{"v":5e-10,"d":"5.00E-10"},{"v":4.03e-09,"d":"4.03E-09"},"full_name=receptor like protein 4. receptor like protein 4.","AT4G34419",null,18.068,3.1324,0.65314,4.7958,{"v":1.62e-06,"d":"1.62E-06"},{"v":1.27E-5,"d":"1.27E-05"},"hypothetical protein."]
["AT2G16245",null,11.489,-4.372,1.0028,-4.36,{"v":1.3e-05,"d":"1.30E-05"},{"v":1.15E-4,"d":"1.15E-04"},"Natural antisense transcript overlaps with AT2G16250. Potential natural antisense gene, locus overlaps with AT2G16250","AT1G49830",null,8.4185,-6.4583,1.3725,-4.7055,{"v":2.53e-06,"d":"2.53E-06"},{"v":2.17e-05,"d":"2.17E-05"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT2G46700","CRK3",105.77,-1.218,0.22139,-5.5016,{"v":3.76e-08,"d":"3.76E-08"},{"v":3.13e-07,"d":"3.13E-07"},"full_name=CDPK-related kinase 3. CDPK-related kinase 3.","AT4G24140",null,31.577,-6.7285,1.0832,-6.2116,{"v":5.24e-10,"d":"5.24E-10"},{"v":4.22e-09,"d":"4.22E-09"},"alpha/beta-Hydrolases superfamily protein.","AT4G14160","ATSEC23F",459.73,0.52266,0.10904,4.7933,{"v":1.64E-6,"d":"1.64E-06"},{"v":1.29E-5,"d":"1.29E-05"},"Sec23/Sec24 protein transport family protein."]
["AT4G21820",null,6.1231,-6.0036,1.3789,-4.3538,{"v":1.34E-5,"d":"1.34E-05"},{"v":1.18E-4,"d":"1.18E-04"},"binding / calmodulin binding protein.","AT1G13080","CYP71B2",113.62,1.0365,0.2205,4.7005,{"v":2.59e-06,"d":"2.59E-06"},{"v":2.22e-05,"d":"2.22E-05"},"full_name=cytochrome P450, family 71, subfamily B, polypeptide 2. cytochrome P450, family 71, subfamily B, polypeptide 2. cytochrome P450 monooxygenase","AT2G02930","GSTF3",18.193,5.2992,0.96492,5.4918,{"v":3.98e-08,"d":"3.98E-08"},{"v":3.3e-07,"d":"3.30E-07"},"full_name=glutathione S-transferase F3. glutathione S-transferase F3. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).","AT1G17420","LOX3",32.286,-3.2443,0.5227,-6.2068,{"v":5.41e-10,"d":"5.41E-10"},{"v":4.34e-09,"d":"4.34E-09"},"full_name=lipoxygenase 3. lipoxygenase 3. LOX3 encode a Lipoxygenase. Lipoxygenases (LOXs) catalyze the oxygenation of fatty acids (FAs).","AT2G39020","NATA2",565.44,-0.48537,0.10133,-4.7899,{"v":1.67e-06,"d":"1.67E-06"},{"v":1.3e-05,"d":"1.30E-05"},"Acyl-CoA N-acyltransferases (NAT) superfamily protein. Although this locus shares considerable sequence similarity with the adjacent NATA1 gene (At2g39030), they appear to encode genes with different functions. NATA1 is involved in the production of N-delta-acetylornithine, but, overexpression of At2g39020 in tobacco does not lead to the formation of this defense compound."]
["AT4G19020","CMT2",839.28,-0.53578,0.12339,-4.342,{"v":1.41e-05,"d":"1.41E-05"},{"v":0.000124,"d":"1.24E-04"},"full_name=chromomethylase 2. chromomethylase 2. Encodes a plant DNA methyltransferase that methylates mainly cytosines in CHH (H = any base but G) contexts. It is involved in heat tolerance.","AT1G67950","BPL2",85.07,-1.1243,0.23959,-4.6925,{"v":2.7E-6,"d":"2.70E-06"},{"v":2.3E-5,"d":"2.30E-05"},"RNA-binding (RRM/RBD/RNP motifs) family protein.","AT2G41070","EEL",2701.5,-0.67713,0.12344,-5.4857,{"v":4.12e-08,"d":"4.12E-08"},{"v":3.41E-7,"d":"3.41E-07"},"full_name=ENHANCED EM LEVEL. Basic-leucine zipper (bZIP) transcription factor family protein. Transcription factor homologous to ABI5. Regulates AtEm1 expression by binding directly at the AtEm1 promoter. Located in the nucleus and expressed during seed maturation in the cotyledons and later in the whole embryo.","AT3G63050",null,21.049,-4.0697,0.65646,-6.1995,{"v":5.66e-10,"d":"5.66E-10"},{"v":4.53e-09,"d":"4.53E-09"},"hypothetical protein.","AT5G01710",null,510.9,-0.56219,0.11748,-4.7854,{"v":1.71e-06,"d":"1.71E-06"},{"v":1.33E-5,"d":"1.33E-05"},"methyltransferase."]
["AT5G07510","GRP14",10.403,4.3996,1.0139,4.3393,{"v":1.43E-5,"d":"1.43E-05"},{"v":1.26E-4,"d":"1.26E-04"},"full_name=glycine-rich protein 14. glycine-rich protein 14. encodes a glycine-rich protein that is expressed in low abundance in stems and leaves, and very low abundance in flowers.","AT1G53070",null,28.626,-2.1388,0.45613,-4.689,{"v":2.75e-06,"d":"2.75E-06"},{"v":2.34E-5,"d":"2.34E-05"},"Legume lectin family protein.","AT4G02050","STP7",123.15,-1.3283,0.24227,-5.4827,{"v":4.19e-08,"d":"4.19E-08"},{"v":3.46E-7,"d":"3.46E-07"},"full_name=sugar transporter protein 7. sugar transporter protein 7.","AT1G20693","HMGB2",2278.1,0.47095,0.076015,6.1955,{"v":5.81e-10,"d":"5.81E-10"},{"v":4.63e-09,"d":"4.63E-09"},"full_name=high mobility group B2. high mobility group B2. Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha.","AT2G30160","MIT1",139.61,0.89621,0.18751,4.7795,{"v":1.76e-06,"d":"1.76E-06"},{"v":1.37e-05,"d":"1.37E-05"},"Mitochondrial substrate carrier family protein."]
["AT1G01900","SBTI1.1",55.677,-1.485,0.34287,-4.3312,{"v":1.48e-05,"d":"1.48E-05"},{"v":0.00013,"d":"1.30E-04"},"subtilase family protein. Encodes AtSBT1.1, a subtilisin-like serine protease. Cleaves the phytosulfokine AtPSK4, a growth promoting peptide.","AT3G04000",null,50.12,1.4423,0.30784,4.6851,{"v":2.8e-06,"d":"2.80E-06"},{"v":2.37E-5,"d":"2.37E-05"},"NAD(P)-binding Rossmann-fold superfamily protein. ChlADR is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on saturated and alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. The N-terminal region of this protein directs GFP to the chloroplast where where ChlADR likely helps to maintain the photosynthetic process by detoxifying reactive carbonyls formed during lipid peroxidation. In addition, this enzyme can also reduce cis-3-hexenal, a major plant volatile compound that contributes to green leaf odor, as well as methylglyoxal in vitro.","AT3G15352","COX17",302.28,0.84511,0.15437,5.4747,{"v":4.38e-08,"d":"4.38E-08"},{"v":3.61e-07,"d":"3.61E-07"},"full_name=cytochrome c oxidase 17. cytochrome c oxidase 17. Encodes protein similar to yeast COX17, a copper-binding protein that mediates the delivery of Cu to the mitochondria for the assembly of a functional cytochrome oxidase complex.","AT5G59890","ADF4",65.913,-1.6572,0.26778,-6.1887,{"v":6.07e-10,"d":"6.07E-10"},{"v":4.83e-09,"d":"4.83E-09"},"full_name=actin depolymerizing factor 4. actin depolymerizing factor 4. actin depolymerizing factor 4 (ADF4) mRNA, complete cds","AT1G75310","AUL1",310.16,-0.59611,0.12484,-4.7749,{"v":1.8e-06,"d":"1.80E-06"},{"v":1.39e-05,"d":"1.39E-05"},"full_name=auxilin-like 1. auxin-like 1 protein."]
["AT1G60070",null,409.25,-0.56092,0.12968,-4.3254,{"v":1.52E-5,"d":"1.52E-05"},{"v":0.000133,"d":"1.33E-04"},"Adaptor protein complex AP-1, gamma subunit.","AT1G64650",null,173.96,-0.79314,0.16968,-4.6745,{"v":2.95e-06,"d":"2.95E-06"},{"v":2.49e-05,"d":"2.49E-05"},"Major facilitator superfamily protein.","AT5G05540","SDN2",168.4,0.95543,0.17467,5.47,{"v":4.5e-08,"d":"4.50E-08"},{"v":3.69e-07,"d":"3.69E-07"},"full_name=small RNA degrading nuclease 2. small RNA degrading nuclease 2.","AT5G45320",null,24.272,-5.7255,0.9256,-6.1857,{"v":6.18e-10,"d":"6.18E-10"},{"v":4.9E-9,"d":"4.90E-09"},"late embryogenesis abundant protein.","AT1G04707",null,14.877,4.7082,0.98661,4.7722,{"v":1.82e-06,"d":"1.82E-06"},{"v":1.41e-05,"d":"1.41E-05"},"Natural antisense transcript overlaps with AT1G09610. Natural antisense transcript overlaps with AT1G09610"]
["AT1G54580","ACP2",2597.7,-0.38756,0.089824,-4.3146,{"v":1.6e-05,"d":"1.60E-05"},{"v":0.000139,"d":"1.39E-04"},"full_name=acyl carrier protein 2. acyl carrier protein 2. encodes an acyl carrier protein expressed in leaves, roots, and dry seeds. Gene expression is not regulated by light but downregulated by starvation and upregulated by increased level of exogenous sucrose.","AT3G43520",null,594.51,0.52035,0.11145,4.6691,{"v":3.03e-06,"d":"3.03E-06"},{"v":2.55E-5,"d":"2.55E-05"},"Transmembrane proteins 14C.","AT1G30410","ABCC12",49.092,-1.8033,0.32992,-5.4658,{"v":4.61e-08,"d":"4.61E-08"},{"v":3.77E-7,"d":"3.77E-07"},"full_name=ATP-binding cassette C12. multidrug resistance-associated protein 13. member of MRP subfamily","AT4G10650",null,36.527,2.4279,0.39274,6.1819,{"v":6.33e-10,"d":"6.33E-10"},{"v":5.01e-09,"d":"5.01E-09"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT4G31354",null,89.79,-1.1204,0.23502,-4.7672,{"v":1.87e-06,"d":"1.87E-06"},{"v":1.44e-05,"d":"1.44E-05"},"hypothetical protein. This gene encodes a small protein and has either evidence of transcription or purifying selection."]
["AT1G64950","CYP89A5",283.27,0.72835,0.16889,4.3127,{"v":1.61e-05,"d":"1.61E-05"},{"v":0.00014,"d":"1.40E-04"},"full_name=cytochrome P450, family 89, subfamily A, polypeptide 5. cytochrome P450, family 89, subfamily A, polypeptide 5. member of CYP89A","AT4G29400",null,75.249,1.1313,0.24262,4.6628,{"v":3.12e-06,"d":"3.12E-06"},{"v":2.63e-05,"d":"2.63E-05"},"oxidoreductase/transition metal ion-binding protein (DUF3531).","AT1G72180","CEPR2",93.967,-1.3942,0.25535,-5.46,{"v":4.76e-08,"d":"4.76E-08"},{"v":3.89E-7,"d":"3.89E-07"},"Leucine-rich receptor-like protein kinase family protein. Encodes a leucine-rich repeat receptor kinase that functions as a receptor for CEP1 peptide. Mediates nitrate uptake signaling.","AT1G15740",null,1162,0.77367,0.12523,6.178,{"v":6.49e-10,"d":"6.49E-10"},{"v":5.13e-09,"d":"5.13E-09"},"Leucine-rich repeat family protein.","AT2G14255",null,150.12,-0.87117,0.18301,-4.7602,{"v":1.93e-06,"d":"1.93E-06"},{"v":1.49E-5,"d":"1.49E-05"},"Ankyrin repeat family protein with DHHC zinc finger domain-containing protein."]
["AT1G60060",null,26.358,-1.8429,0.42816,-4.3043,{"v":1.68e-05,"d":"1.68E-05"},{"v":1.46E-4,"d":"1.46E-04"},"Serine/threonine-protein kinase WNK (With No Lysine)-like protein.","AT5G17170","ENH1",426.23,-0.63502,0.13632,-4.6585,{"v":3.19E-6,"d":"3.19E-06"},{"v":2.68e-05,"d":"2.68E-05"},"full_name=enhancer of sos3-1. rubredoxin family protein.","AT4G30150",null,402.85,0.97902,0.17951,5.454,{"v":4.93e-08,"d":"4.93E-08"},{"v":4.02e-07,"d":"4.02E-07"},"Urb2/Npa2 family protein.","AT5G10160",null,24.029,-3.2931,0.53386,-6.1685,6.89E-10,{"v":5.44e-09,"d":"5.44E-09"},"Thioesterase superfamily protein.","AT5G39610","NAC6",19.261,-3.117,0.6553,-4.7567,{"v":1.97e-06,"d":"1.97E-06"},{"v":1.51e-05,"d":"1.51E-05"},"full_name=NAC domain containing protein 6. NAC domain containing protein 6. Encodes a NAC-domain transcription factor. Positively regulates aging-induced cell death and senescence in leaves. This gene is upregulated in response to salt stress in wildtype as well as NTHK1 transgenic lines although in the latter case the induction was drastically reduced. It was also upregulated by ABA, ACC and NAA treatment, although in the latter two cases, the induction occurred relatively late when compared with NaCl or ABA treatments. Note: this protein (AtNAC6) on occasion has also been referred to as AtNAC2, not to be confused with the AtNAC2 found at locus AT3G15510."]
["AT3G56090","FER3",34.949,-1.8563,0.43163,-4.3008,{"v":1.7E-5,"d":"1.70E-05"},{"v":0.000148,"d":"1.48E-04"},"full_name=ferritin 3. ferritin 3. Encodes FERRITIN 3, AtFER3. Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life. Function as the main iron store in mammals. Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool.","AT5G56010","HSP81-3",1701.3,0.72091,0.15488,4.6545,{"v":3.25e-06,"d":"3.25E-06"},{"v":2.73E-5,"d":"2.73E-05"},"full_name=heat shock protein 81-3. heat shock protein 81-3. A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Overexpression reduced tolerance to heat and conferred higher tolerance to calcium.","AT2G38770","EMB2765",500.5,0.74036,0.13591,5.4475,{"v":5.11e-08,"d":"5.11E-08"},{"v":4.16e-07,"d":"4.16E-07"},"full_name=EMBRYO DEFECTIVE 2765. P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT3G30841",null,135.16,-1.1588,0.18827,-6.1547,{"v":7.52e-10,"d":"7.52E-10"},{"v":5.92e-09,"d":"5.92E-09"},"Cofactor-independent phosphoglycerate mutase.","AT4G20980",null,916.07,0.39965,0.084141,4.7497,{"v":2.04E-6,"d":"2.04E-06"},{"v":1.56E-5,"d":"1.56E-05"},"Eukaryotic translation initiation factor 3 subunit 7 (eIF-3)."]
["AT5G45430",null,1203.1,0.47008,0.10959,4.2892,{"v":1.79e-05,"d":"1.79E-05"},{"v":1.55E-4,"d":"1.55E-04"},"Protein kinase superfamily protein.","AT1G17420","LOX3",184.36,0.94502,0.20344,4.6452,{"v":3.4e-06,"d":"3.40E-06"},{"v":2.84e-05,"d":"2.84E-05"},"full_name=lipoxygenase 3. lipoxygenase 3. LOX3 encode a Lipoxygenase. Lipoxygenases (LOXs) catalyze the oxygenation of fatty acids (FAs).","AT1G06530","PMD2",342.16,0.7454,0.13693,5.4436,{"v":5.22e-08,"d":"5.22E-08"},{"v":4.24e-07,"d":"4.24E-07"},"full_name=peroxisomal and mitochondrial division factor 2. Tropomyosin-like protein. Encodes PEROXISOMAL AND MITOCHONDRIAL DIVISION FACTOR2. Involved in mitochondrial morphogenesis.","AT1G44810","GPL4",443.45,0.77891,0.12692,6.137,{"v":8.41e-10,"d":"8.41E-10"},{"v":6.6e-09,"d":"6.60E-09"},"DNA-binding storekeeper protein-related transcriptional regulator.","AT1G23850",null,13.908,6.106,1.2868,4.7449,{"v":2.09e-06,"d":"2.09E-06"},{"v":1.59E-5,"d":"1.59E-05"},"transmembrane protein."]
["AT2G38340","DREB19",27.739,1.7009,0.39719,4.2823,{"v":1.85e-05,"d":"1.85E-05"},{"v":0.000159,"d":"1.59E-04"},"full_name=dehydration response element-binding protein 19. Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.","AT5G14430",null,392,-0.60625,0.1308,-4.6348,{"v":3.57e-06,"d":"3.57E-06"},{"v":2.98e-05,"d":"2.98E-05"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT5G10695",null,33.757,2.0623,0.37907,5.4403,{"v":5.32E-8,"d":"5.32E-08"},{"v":4.31e-07,"d":"4.31E-07"},"methionyl-tRNA synthetase.","AT4G18360","GOX3",118.33,1.6409,0.26762,6.1316,{"v":8.7e-10,"d":"8.70E-10"},{"v":6.81e-09,"d":"6.81E-09"},"full_name=glycolate oxidase 3. Aldolase-type TIM barrel family protein. Encodes a glycolate oxidase that modulates reactive oxygen species-mediated signal transduction during nonhost resistance.","AT1G07820",null,358.15,-0.57595,0.1216,-4.7365,{"v":2.17E-6,"d":"2.17E-06"},{"v":1.66E-5,"d":"1.66E-05"},"Histone superfamily protein."]
["AT1G61795",null,14.384,-2.7122,0.63424,-4.2762,{"v":1.9e-05,"d":"1.90E-05"},{"v":1.63E-4,"d":"1.63E-04"},"PAK-box/P21-Rho-binding family protein.","AT3G53760","GCP4",154.08,-0.84989,0.18361,-4.6289,{"v":3.68e-06,"d":"3.68E-06"},{"v":3.06e-05,"d":"3.06E-05"},"full_name=GAMMA-TUBULIN COMPLEX PROTEIN 4. GAMMA-TUBULIN COMPLEX PROTEIN 4. Encodes GCP4 (gamma-Tubulin Complex Protein 4), required for microtubule organization.","AT2G24500","FZF",344.12,0.8158,0.15016,5.433,{"v":5.54E-8,"d":"5.54E-08"},{"v":4.47e-07,"d":"4.47E-07"},"Zinc finger protein 622. Encodes a C2H2 zinc finger protein FZF.","AT2G26990","FUS12",593.91,0.64901,0.10599,6.1233,{"v":9.17e-10,"d":"9.17E-10"},{"v":7.16e-09,"d":"7.16E-09"},"full_name=FUSCA 12. proteasome family protein. Represses photomorphogenesis and induces skotomorphogenesis in the dark.","AT3G60850",null,308.88,0.61819,0.13077,4.7272,{"v":2.28e-06,"d":"2.28E-06"},{"v":1.73E-5,"d":"1.73E-05"},"hypothetical protein."]
["AT5G53300","UBC10",2307.2,-0.37731,0.088356,-4.2704,{"v":1.95E-5,"d":"1.95E-05"},{"v":0.000167,"d":"1.67E-04"},"full_name=ubiquitin-conjugating enzyme 10. ubiquitin-conjugating enzyme 10. Encodes a ubiquitin conjugating enzyme.","AT5G11310","SOAR1",62.275,1.2371,0.268,4.6159,{"v":3.91e-06,"d":"3.91E-06"},{"v":3.25e-05,"d":"3.25E-05"},"Pentatricopeptide repeat (PPR) superfamily protein. altering expression of ABA-responsive genes, critical negative regulator of ABA signaling, downstream of ABAR/CHLH and upstream of ABI5, altering expression of ABI5, ubiquitously expressed with the highest expression level in seeds, ABA response in seed germination and post-germination growth, AT1G65800","AT4G39990","RABA4B",97.377,-1.2188,0.22474,-5.4228,{"v":5.87e-08,"d":"5.87E-08"},{"v":4.72e-07,"d":"4.72E-07"},"full_name=RAB GTPase homolog A4B. RAB GTPase homolog A4B. GTP-binding protein ATGB3","AT5G59540",null,121.91,1.3142,0.21488,6.116,{"v":9.6e-10,"d":"9.60E-10"},{"v":7.46e-09,"d":"7.46E-09"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT3G43300","ATMIN7",541.77,0.51954,0.11013,4.7173,{"v":2.39E-6,"d":"2.39E-06"},{"v":1.81e-05,"d":"1.81E-05"},"full_name=HOPM interactor 7. HOPM interactor 7. AtMIN7 is an immunity associated Arabidopsis protein targeted by HopM1, a conserved Pseudomonas syringae virulence protein. AtMIN7 encodes one of the eight members of the Arabidopsis adenosine diphosphate (ADP) ribosylation factor (ARF) guanine nucleotide exchange factor (GEF) protein family. The AFR GEF proteins are key components of the vesicle trafficking system in eukaryotic cells. HopM1 mediates the destruction of AtMIN7 via the host proteasome."]
["AT3G10060",null,82.984,-1.0184,0.23901,-4.2608,{"v":2.04e-05,"d":"2.04E-05"},{"v":1.74E-4,"d":"1.74E-04"},"FKBP-like peptidyl-prolyl cis-trans isomerase family protein.","AT1G16020","CCZ1A",292.66,-0.62216,0.13489,-4.6124,{"v":3.98E-6,"d":"3.98E-06"},{"v":3.3e-05,"d":"3.30E-05"},"vacuolar fusion protein (DUF1712).","AT3G03060","SBA1",66.076,1.5008,0.27694,5.4194,{"v":5.98e-08,"d":"5.98E-08"},{"v":4.8e-07,"d":"4.80E-07"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT4G01800","AGY1",497.86,0.68092,0.11137,6.114,{"v":9.72e-10,"d":"9.72E-10"},{"v":7.54E-9,"d":"7.54E-09"},"full_name=Albino or Glassy Yellow 1. Albino or Glassy Yellow 1. Encodes the ATPase subunit of the chloroplast Sec translocation machinery which plays an essential role in chloroplast biogenesis and the regulation of photosynthesis, the absence of which triggers a retrograde signal, eventually leading to a reprogramming of chloroplast and mitochondrial gene expression.","AT4G02350","SEC15B",315.89,0.6078,0.12891,4.7149,{"v":2.42e-06,"d":"2.42E-06"},{"v":1.83e-05,"d":"1.83E-05"},"full_name=exocyst complex component sec15B. exocyst complex component sec15B. Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion."]
["AT4G04320",null,315.12,0.58823,0.13822,4.2557,{"v":2.08e-05,"d":"2.08E-05"},{"v":0.000178,"d":"1.78E-04"},"malonyl-CoA decarboxylase family protein.","AT4G00740","QUA3",501.54,-0.53796,0.11674,-4.6084,{"v":4.06e-06,"d":"4.06E-06"},{"v":3.35e-05,"d":"3.35E-05"},"full_name=QUASIMODO 3. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. Encodes a Golgi-localized type II membrane pectin methyltransferase regulating cell wall biosynthesis in suspension cells.","AT3G24660","TMKL1",44.791,-2.1063,0.3894,-5.4091,{"v":6.34e-08,"d":"6.34E-08"},{"v":5.07e-07,"d":"5.07E-07"},"full_name=transmembrane kinase-like 1. transmembrane kinase-like 1. member of Receptor kinase-like protein family","AT4G28260",null,823.43,0.62522,0.10237,6.1074,{"v":1.01E-9,"d":"1.01E-09"},{"v":7.84e-09,"d":"7.84E-09"},"acyl-UDP-N-acetylglucosamine O-acyltransferase.","AT1G23120",null,84.244,-1.133,0.24061,-4.709,{"v":2.49e-06,"d":"2.49E-06"},{"v":1.88E-5,"d":"1.88E-05"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein."]
["AT5G06360",null,603.97,0.50374,0.11846,4.2525,{"v":2.11e-05,"d":"2.11E-05"},{"v":0.00018,"d":"1.80E-04"},"Ribosomal protein S8e family protein.","AT5G17550","PEX19-2",439.39,0.75671,0.16441,4.6025,{"v":4.17e-06,"d":"4.17E-06"},{"v":3.44e-05,"d":"3.44E-05"},"full_name=peroxin 19-2. peroxin 19-2.","AT1G18660","IAP1",267.27,-0.78878,0.14598,-5.4035,{"v":6.54e-08,"d":"6.54E-08"},{"v":5.22e-07,"d":"5.22E-07"},"zinc finger (C3HC4-type RING finger) family protein.","AT3G11950",null,37.53,-2.2892,0.37506,-6.1035,{"v":1.04e-09,"d":"1.04E-09"},{"v":8.02E-9,"d":"8.02E-09"},"TRAF-like superfamily protein. publications Tian et al (2007) and Sadre et al (2006) refer to At3g11950. The prenyltransferase gene studied is actually At3g11945 which arises from a split of the previous At3g11950 gene model.","AT2G17490",null,24.537,-2.1529,0.45758,-4.705,{"v":2.54e-06,"d":"2.54E-06"},{"v":1.91E-5,"d":"1.91E-05"},"transposable_element_gene."]
["AT1G10500","CPISCA",352.22,0.60542,0.14252,4.248,{"v":2.16E-5,"d":"2.16E-05"},{"v":1.83E-4,"d":"1.83E-04"},"full_name=chloroplast-localized ISCA-like protein. chloroplast-localized ISCA-like protein. Involved in chloroplast Fe-S cluster assembly. Located in the chloroplast stroma. Expressed preferentially in green tissues.","AT3G48980",null,408.34,-0.57899,0.12608,-4.5923,{"v":4.38e-06,"d":"4.38E-06"},{"v":3.6e-05,"d":"3.60E-05"},"O-glucosyltransferase rumi-like protein (DUF821).","AT2G40340","DREB2C",61.883,1.7306,0.32061,5.3979,{"v":6.74e-08,"d":"6.74E-08"},{"v":5.38e-07,"d":"5.38E-07"},"Integrase-type DNA-binding superfamily protein. Encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.","AT4G13495",null,31.686,-2.611,0.42839,-6.0949,{"v":1.09E-9,"d":"1.09E-09"},{"v":8.43E-9,"d":"8.43E-09"},"other_RNA. Unknown gene","AT1G59820","ALA3",263.17,0.67154,0.14297,4.6972,{"v":2.64e-06,"d":"2.64E-06"},{"v":1.98E-5,"d":"1.98E-05"},"full_name=aminophospholipid ATPase 3. aminophospholipid ATPase 3. Encodes a phospholipid translocase. Involved in secretory vesicle formation from trans-Golgi in peripheral columella cells at the root tip. Mutants have short primary roots and grow slower."]
["AT2G44470","BGLU29",3576.5,0.43747,0.10309,4.2437,{"v":2.2e-05,"d":"2.20E-05"},{"v":0.000186,"d":"1.86E-04"},"full_name=beta glucosidase 29. beta glucosidase 29.","AT5G49100",null,228.48,-0.7977,0.17399,-4.5847,{"v":4.55e-06,"d":"4.55E-06"},{"v":3.73e-05,"d":"3.73E-05"},"vitellogenin-like protein.","AT1G53050",null,428.09,-0.70166,0.13008,-5.3942,{"v":6.88e-08,"d":"6.88E-08"},{"v":5.47e-07,"d":"5.47E-07"},"Protein kinase superfamily protein.","AT4G20050","QRT3",17.833,-7.7689,1.2768,-6.0847,{"v":1.17e-09,"d":"1.17E-09"},{"v":8.97e-09,"d":"8.97E-09"},"full_name=QUARTET 3. Pectin lyase-like superfamily protein. Encodes a polygalacturonase that plays a direct role in degrading the pollen mother cell wall during microspore development.","AT2G25970",null,1209.3,-0.38691,0.08243,-4.6939,{"v":2.68e-06,"d":"2.68E-06"},{"v":2.01e-05,"d":"2.01E-05"},"KH domain-containing protein."]
["AT2G13690",null,240.3,-0.71676,0.16897,-4.2419,{"v":2.22e-05,"d":"2.22E-05"},{"v":0.000188,"d":"1.88E-04"},"PRLI-interacting factor.","AT4G37070","PLP1",14.03,3.3153,0.72322,4.5841,{"v":4.56e-06,"d":"4.56E-06"},{"v":3.74e-05,"d":"3.74E-05"},"Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein. Patatin-related phospholipase A. Expressed strongly and exclusively in roots. AtplaIVA-null mutants have reduced lateral root development. Phosphorylation by calcium-dependent protein kinases in vitro enhances its activity.","AT2G30060",null,239.03,0.83839,0.15548,5.3921,{"v":6.96e-08,"d":"6.96E-08"},{"v":5.53e-07,"d":"5.53E-07"},"Pleckstrin homology (PH) domain superfamily protein.","AT3G06010","ATCHR12",329.86,0.93244,0.15325,6.0842,{"v":1.17e-09,"d":"1.17E-09"},{"v":8.98E-9,"d":"8.98E-09"},"SNF2/Brahma-type chromatin-remodeling protein CHR12. Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein. AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress.","AT2G26740","SEH",1379.2,-0.34247,0.072999,-4.6915,{"v":2.71e-06,"d":"2.71E-06"},{"v":2.03e-05,"d":"2.03E-05"},"full_name=soluble epoxide hydrolase. soluble epoxide hydrolase. Encodes a soluble epoxide hydrolase whose expression is induced by auxin and water stress."]
["AT5G07220","BAG3",593.79,0.50681,0.1197,4.2339,{"v":2.3E-5,"d":"2.30E-05"},{"v":1.94E-4,"d":"1.94E-04"},"full_name=BCL-2-associated athanogene 3. BCL-2-associated athanogene 3. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.","AT1G52150","ATHB-15",78.66,-1.1134,0.24385,-4.5659,{"v":4.97e-06,"d":"4.97E-06"},{"v":4.06e-05,"d":"4.06E-05"},"Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein. Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation.","AT5G62390","BAG7",176.27,-1.0651,0.19774,-5.3865,{"v":7.18e-08,"d":"7.18E-08"},{"v":5.69e-07,"d":"5.69E-07"},"full_name=BCL-2-associated athanogene 7. BCL-2-associated athanogene 7. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. Localized to the ER. Necessary for the proper maintenance of the unfolded protein response during heat and cold tolerance.","AT4G35880",null,34.99,-2.4407,0.40161,-6.0773,{"v":1.22e-09,"d":"1.22E-09"},{"v":9.36e-09,"d":"9.36E-09"},"Eukaryotic aspartyl protease family protein.","AT3G54190",null,363.37,0.589,0.12574,4.6844,{"v":2.81e-06,"d":"2.81E-06"},{"v":2.1e-05,"d":"2.10E-05"},"Transducin/WD40 repeat-like superfamily protein."]
["AT4G33330","PGSIP3",12.138,-3.2074,0.7585,-4.2286,{"v":2.35e-05,"d":"2.35E-05"},{"v":0.000198,"d":"1.98E-04"},"full_name=plant glycogenin-like starch initiation protein 3. plant glycogenin-like starch initiation protein 3. Encodes a glucuronyltransferase responsible for the addition of GlcA residues onto xylan and for secondary wall deposition.","AT1G69700","HVA22C",24.112,-2.4414,0.53519,-4.5618,{"v":5.07e-06,"d":"5.07E-06"},{"v":4.13e-05,"d":"4.13E-05"},"full_name=HVA22 homologue C. HVA22 homologue C. Part of the AtHVA22 family. Protein expression is ABA- and stress-inducible.","AT5G58070","TIL",5707.7,0.62992,0.11708,5.3803,{"v":7.43e-08,"d":"7.43E-08"},{"v":5.88e-07,"d":"5.88E-07"},"full_name=temperature-induced lipocalin. temperature-induced lipocalin. Encodes a temperature-induced lipocalin TIL1. Involved in thermotolerance. Peripherally associated with plasma membrane.","AT4G13250","NYC1",2460.1,-0.66449,0.1094,-6.0742,{"v":1.25E-9,"d":"1.25E-09"},{"v":9.52e-09,"d":"9.52E-09"},"full_name=NON-YELLOW COLORING 1. NAD(P)-binding Rossmann-fold superfamily protein. Encodes a chlorophyll b reductase involved in the degradation of chlorophyll b and LHCII (light harvesting complex II).","AT4G18380",null,107.64,1.0084,0.21549,4.6796,{"v":2.87e-06,"d":"2.87E-06"},{"v":2.14e-05,"d":"2.14E-05"},"F-box family protein."]
["AT5G05180",null,16.218,-2.7253,0.645,-4.2252,{"v":2.39e-05,"d":"2.39E-05"},{"v":0.0002,"d":"2.00E-04"},"myosin heavy chain, striated protein.","AT5G46700","TRN2",13.226,-5.1994,1.1406,-4.5587,{"v":5.15e-06,"d":"5.15E-06"},{"v":4.19e-05,"d":"4.19E-05"},"full_name=TORNADO 2. Tetraspanin family protein. Encodes a transmembrane protein of the tetraspanin (TET) family, one of 17 members found in Arabidopsis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway. Required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis.","AT2G23620","MES1",34.679,1.9756,0.36801,5.3683,{"v":7.95e-08,"d":"7.95E-08"},{"v":6.27e-07,"d":"6.27E-07"},"full_name=methyl esterase 1. methyl esterase 1. Encodes a protein shown to have carboxylesterase activity, methyl salicylate esterase activity, methyl jasmonate esterase activity, and methyl IAA esterase activity in vitro. MES1 appears to be involved in MeSA hydrolysis in planta. Expression of MES1 can restore systemic acquired resistance in SAR-deficient tobacco plants. This protein does not act on MeGA4, or MEGA9 in vitro.","AT1G18330","EPR1",157.24,1.6019,0.26389,6.0705,{"v":1.28e-09,"d":"1.28E-09"},{"v":9.72e-09,"d":"9.72E-09"},"full_name=EARLY-PHYTOCHROME-RESPONSIVE1. Homeodomain-like superfamily protein. EARLY-PHYTOCHROME-RESPONSIVE1","AT1G27510","EX2",838.25,0.42265,0.090412,4.6747,{"v":2.94e-06,"d":"2.94E-06"},{"v":2.19E-5,"d":"2.19E-05"},"full_name=EXECUTER 2. UvrB/UvrC domain protein (DUF3506). Encodes one of the two plastid proteins EXECUTER (EX1, AT4G33630) and EX2 (AT1G27510). Mediates singlet oxygen induced programmed cell death."]
["AT1G75490",null,1346.2,0.49307,0.11681,4.2212,{"v":2.43e-05,"d":"2.43E-05"},{"v":2.03E-4,"d":"2.03E-04"},"Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.","AT2G07050","CAS1",1227.1,-0.44338,0.097426,-4.551,{"v":5.34e-06,"d":"5.34E-06"},{"v":4.33e-05,"d":"4.33E-05"},"full_name=cycloartenol synthase 1. cycloartenol synthase 1. Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.","AT5G24660","LSU2",116.66,1.2584,0.23482,5.3592,{"v":8.36e-08,"d":"8.36E-08"},{"v":6.57e-07,"d":"6.57E-07"},"full_name=RESPONSE TO LOW SULFUR 2. response to low sulfur 2.","AT3G22620","LTPG20",22.59,-4.1421,0.68322,-6.0626,{"v":1.34e-09,"d":"1.34E-09"},{"v":1.02E-8,"d":"1.02E-08"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT1G54090","EXO70D2",146.38,0.85326,0.18283,4.6669,{"v":3.06e-06,"d":"3.06E-06"},{"v":2.26E-5,"d":"2.26E-05"},"full_name=exocyst subunit exo70 family protein D2. exocyst subunit exo70 family protein D2. A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree."]
["AT5G45800","MEE62",270.25,-0.66601,0.15794,-4.2168,{"v":2.48E-5,"d":"2.48E-05"},{"v":0.000207,"d":"2.07E-04"},"full_name=maternal effect embryo arrest 62. Leucine-rich repeat protein kinase family protein.","AT4G08390","SAPX",441.76,0.67957,0.14953,4.5448,{"v":5.5e-06,"d":"5.50E-06"},{"v":4.45e-05,"d":"4.45E-05"},"full_name=stromal ascorbate peroxidase. stromal ascorbate peroxidase. Encodes a chloroplastic stromal ascorbate peroxidase sAPX. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.","AT5G37850","SOS4",95.253,-1.1928,0.22281,-5.3535,{"v":8.63e-08,"d":"8.63E-08"},{"v":6.77e-07,"d":"6.77E-07"},"full_name=SALT OVERLY SENSITIVE 4. pfkB-like carbohydrate kinase family protein. Encodes a pyridoxal kinase required for root hair development. Mutants are hypersensitive to Na+, K+ and Li+.","AT3G49470","NACA2",115.28,1.2474,0.2063,6.0467,{"v":1.48e-09,"d":"1.48E-09"},{"v":1.12e-08,"d":"1.12E-08"},"full_name=nascent polypeptide-associated complex subunit alpha-like protein 2. nascent polypeptide-associated complex subunit alpha-like protein 2.","AT1G27190","BIR3",151.6,0.86573,0.18578,4.6599,{"v":3.16e-06,"d":"3.16E-06"},{"v":2.34E-5,"d":"2.34E-05"},"Leucine-rich repeat protein kinase family protein."]
["AT2G31560",null,99.029,-0.94266,0.22373,-4.2133,{"v":2.52e-05,"d":"2.52E-05"},{"v":0.00021,"d":"2.10E-04"},"signal transducer/transcription protein, putative (DUF1685).","AT2G38880","NF-YB1",400.3,0.66924,0.14754,4.5361,{"v":5.73e-06,"d":"5.73E-06"},{"v":4.62e-05,"d":"4.62E-05"},"full_name=nuclear factor Y, subunit B1. nuclear factor Y, subunit B1. Encodes a transcription factor from the nuclear factor Y (NF-Y) family, AtNF-YB1. Confers drought tolerance.","AT2G05120","NUP133",207.24,0.87848,0.16435,5.3452,{"v":9.03e-08,"d":"9.03E-08"},{"v":7.07e-07,"d":"7.07E-07"},"Nucleoporin, Nup133/Nup155-like protein.","AT1G58030","CAT2",325.18,0.80013,0.13243,6.0421,{"v":1.52e-09,"d":"1.52E-09"},{"v":1.15E-8,"d":"1.15E-08"},"full_name=cationic amino acid transporter 2. cationic amino acid transporter 2. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast.","AT1G33050",null,1559.1,0.35783,0.076912,4.6524,{"v":3.28e-06,"d":"3.28E-06"},{"v":2.42e-05,"d":"2.42E-05"},"hypothetical protein."]
["AT5G53470","ACBP1",275.22,0.59049,0.14024,4.2104,{"v":2.55E-5,"d":"2.55E-05"},{"v":2.12E-4,"d":"2.12E-04"},"full_name=acyl-CoA binding protein 1. acyl-CoA binding protein 1. Encodes an acyl-CoA binding protein that is localized to vesicles,and plasma membrane especially in epidermal cells of heart, torpedo and cotyledon stage embryos, cell wall of the seed coat. Northern blot analysis showed that the 1.4 kb ACBP1 mRNA was expressed in silique, root, stem, leaf and flower.","AT3G52140","NOXY38",423.88,0.5793,0.12793,4.5282,{"v":5.95e-06,"d":"5.95E-06"},{"v":4.79e-05,"d":"4.79E-05"},"full_name=non responding to oxylipins 38. tetratricopeptide repeat (TPR)-containing protein. Involved in regulating mitochondrial quality control. Regulates mitochondrial association time and thereby is involved in mitochondrial fusion. Mutants show unregulated autophagy and display transcriptomic markers of mitochondrial stress.","AT1G28340","RLP4",601.49,-0.63774,0.11946,-5.3384,{"v":9.38e-08,"d":"9.38E-08"},{"v":7.32e-07,"d":"7.32E-07"},"full_name=receptor like protein 4. receptor like protein 4.","AT1G63800","UBC5",363.54,0.98347,0.16322,6.0253,{"v":1.69E-9,"d":"1.69E-09"},{"v":1.27E-8,"d":"1.27E-08"},"full_name=ubiquitin-conjugating enzyme 5. ubiquitin-conjugating enzyme 5.","AT4G32250","KOC1",341.4,-0.60627,0.13045,-4.6475,{"v":3.36E-6,"d":"3.36E-06"},{"v":2.47e-05,"d":"2.47E-05"},"Protein kinase superfamily protein."]
["AT1G01650","SPPL4",321.09,0.62837,0.14938,4.2065,{"v":2.59e-05,"d":"2.59E-05"},{"v":0.000215,"d":"2.15E-04"},"full_name=SIGNAL PEPTIDE PEPTIDASE-LIKE 4. SIGNAL PEPTIDE PEPTIDASE-LIKE 4.","AT4G11100",null,27.914,-1.8738,0.41437,-4.5222,{"v":6.12e-06,"d":"6.12E-06"},{"v":4.91e-05,"d":"4.91E-05"},"gelsolin protein.","AT5G23300","PYRD",178.49,0.89105,0.16713,5.3315,{"v":9.74e-08,"d":"9.74E-08"},{"v":7.58e-07,"d":"7.58E-07"},"full_name=pyrimidine d. pyrimidine d. dihydroorotate dehydrogenase, catalyses fourth step of pyrimidine biosynthesis","AT3G26932","DRB3",47.983,-2.3021,0.38259,-6.0172,{"v":1.77e-09,"d":"1.77E-09"},{"v":1.34e-08,"d":"1.34E-08"},"full_name=dsRNA-binding protein 3. dsRNA-binding protein 3.","AT4G38570","PIS2",445.62,-0.50797,0.1095,-4.639,{"v":3.5e-06,"d":"3.50E-06"},{"v":2.57e-05,"d":"2.57E-05"},"full_name=probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2. Putative CDP-diacylglycerol-inositol 3-phosphatidyltransferase 2."]
["AT5G25475",null,28.451,-1.6457,0.3922,-4.1962,{"v":2.71e-05,"d":"2.71E-05"},{"v":2.24E-4,"d":"2.24E-04"},"AP2/B3-like transcriptional factor family protein.","AT5G18660","PCB2",79.267,-1.1065,0.24496,-4.5172,{"v":6.27e-06,"d":"6.27E-06"},{"v":5.02E-5,"d":"5.02E-05"},"full_name=PALE-GREEN AND CHLOROPHYLL B REDUCED 2. NAD(P)-binding Rossmann-fold superfamily protein. Encodes a protein with 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity. Mutants accumulate divinyl chlorophyll rather than monovinyl chlorophyll.","AT3G48410",null,98.563,-1.2453,0.23371,-5.3285,{"v":9.9E-8,"d":"9.90E-08"},{"v":7.69e-07,"d":"7.69E-07"},"alpha/beta-Hydrolases superfamily protein.","AT5G24690",null,669.21,0.65039,0.10824,6.009,{"v":1.87E-9,"d":"1.87E-09"},{"v":1.4E-8,"d":"1.40E-08"},"plant/protein, putative (DUF3411).","AT1G78880","SHOU4",803.72,0.41613,0.089809,4.6335,{"v":3.6e-06,"d":"3.60E-06"},{"v":2.63e-05,"d":"2.63E-05"},"Ubiquitin-specific protease family C19-related protein."]
["AT5G23120","HCF136",103.22,-0.9126,0.21784,-4.1893,{"v":2.8E-5,"d":"2.80E-05"},{"v":2.31E-4,"d":"2.31E-04"},"full_name=HIGH CHLOROPHYLL FLUORESCENCE 136. photosystem II stability/assembly factor, chloroplast (HCF136). encodes a stability and/or assembly factor of photosystem II","AT5G19530","ACL5",279.28,0.71901,0.15934,4.5125,{"v":6.41e-06,"d":"6.41E-06"},{"v":5.12e-05,"d":"5.12E-05"},"full_name=ACAULIS 5. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function.","AT4G39080","VHA-A3",708.8,-0.59024,0.11095,-5.3198,{"v":1.04E-7,"d":"1.04E-07"},{"v":8.04e-07,"d":"8.04E-07"},"full_name=vacuolar proton ATPase A3. vacuolar proton ATPase A3. Vacuolar proton ATPase subunit VHA-a isoform 3. Localized in the tonoplast.","AT1G67480",null,186.74,1.1824,0.19703,6.0008,{"v":1.96e-09,"d":"1.96E-09"},{"v":1.47e-08,"d":"1.47E-08"},"Galactose oxidase/kelch repeat superfamily protein.","AT1G20120",null,14.837,5.2987,1.1455,4.6257,{"v":3.73e-06,"d":"3.73E-06"},{"v":2.72E-5,"d":"2.72E-05"},"GDSL-like Lipase/Acylhydrolase superfamily protein."]
["AT5G05740","EGY2",160.61,-0.73721,0.17609,-4.1867,{"v":2.83E-5,"d":"2.83E-05"},{"v":2.33E-4,"d":"2.33E-04"},"full_name=ethylene-dependent gravitropism-deficient and yellow-green-like 2. ethylene-dependent gravitropism-deficient and yellow-green-like 2. S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442%E2%80%93454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171%E2%80%93179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria.","AT5G64530","XND1",15.38,-3.2133,0.71278,-4.5081,{"v":6.54e-06,"d":"6.54E-06"},{"v":5.21e-05,"d":"5.21E-05"},"full_name=xylem NAC domain 1. xylem NAC domain 1.","AT2G36950","ATHMP20",104.7,1.4404,0.27105,5.3141,{"v":1.07e-07,"d":"1.07E-07"},{"v":8.28e-07,"d":"8.28E-07"},"Heavy metal transport/detoxification superfamily protein.","AT1G75680","GH9B7",40.319,-2.2434,0.37432,-5.9932,{"v":2.06e-09,"d":"2.06E-09"},{"v":1.54e-08,"d":"1.54E-08"},"full_name=glycosyl hydrolase 9B7. glycosyl hydrolase 9B7.","AT1G10865",null,359.27,-0.63129,0.13661,-4.621,{"v":3.82e-06,"d":"3.82E-06"},{"v":2.78e-05,"d":"2.78E-05"},"cytochrome C oxidase assembly factor."]
["AT1G14850","NUP155",265.21,0.59779,0.14291,4.1829,{"v":2.88e-05,"d":"2.88E-05"},{"v":0.000236,"d":"2.36E-04"},"full_name=nucleoporin 155. nucleoporin 155. Encodes a protein similar to nucleoporin, a a major component of the nuclear pore complex (NPC) involved in cellular nucleo-cytoplasmic transport","AT2G36530","LOS2",2543.2,-0.42746,0.094908,-4.5039,{"v":6.67e-06,"d":"6.67E-06"},{"v":5.31e-05,"d":"5.31E-05"},"full_name=LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2. Enolase. Involved in light-dependent cold tolerance and encodes an enolase. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT3G07050","NSN1",270.14,1.0871,0.20486,5.3067,{"v":1.12E-7,"d":"1.12E-07"},{"v":8.61e-07,"d":"8.61E-07"},"full_name=nucleostemin-like 1. GTP-binding family protein. Arabidopsis NSN1 encodes a nucleolar GTP- binding protein and is required for maintenance of inflorescence meristem identity and floral organ development.","AT1G21880","LYM1",68.279,-1.6637,0.2778,-5.989,{"v":2.11E-9,"d":"2.11E-09"},{"v":1.57e-08,"d":"1.57E-08"},"full_name=lysm domain GPI-anchored protein 1 precursor. lysm domain GPI-anchored protein 1 precursor. Encodes a lysin-motif protein mediating bacterial peptidoglycan sensing and immunity to bacterial infection. Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant.","AT1G63090","PP2-A11",198.22,0.74219,0.16086,4.614,{"v":3.95e-06,"d":"3.95E-06"},{"v":2.87E-5,"d":"2.87E-05"},"full_name=phloem protein 2-A11. phloem protein 2-A11."]
["AT5G15230","GASA4",12.9,-3.0304,0.72557,-4.1766,{"v":2.96e-05,"d":"2.96E-05"},{"v":2.42E-4,"d":"2.42E-04"},"full_name=GAST1 protein homolog 4. GAST1 protein homolog 4. Encodes gibberellin-regulated protein GASA4. Promotes GA responses and exhibits redox activity.","AT2G01720","OST1A",505.97,-0.52561,0.11683,-4.4991,{"v":6.83e-06,"d":"6.83E-06"},{"v":5.41E-5,"d":"5.41E-05"},"Ribophorin I.","AT4G24920",null,201.3,-1.2674,0.23921,-5.2983,{"v":1.17E-7,"d":"1.17E-07"},{"v":8.98e-07,"d":"8.98E-07"},"secE/sec61-gamma protein transport protein.","AT3G24750","LAZY5",16.681,-7.666,1.2821,-5.9792,{"v":2.24e-09,"d":"2.24E-09"},{"v":1.67e-08,"d":"1.67E-08"},"hypothetical protein.","AT5G03285",null,145.37,-1.0288,0.22353,-4.6027,{"v":4.17e-06,"d":"4.17E-06"},{"v":3.02e-05,"d":"3.02E-05"},"other_RNA."]
["AT2G39510","UMAMIT14",143.94,-0.92268,0.22125,-4.1703,{"v":3.04E-5,"d":"3.04E-05"},{"v":0.000248,"d":"2.48E-04"},"full_name=Usually multiple acids move in and out Transporters 14. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT3G51820","G4",57.147,-1.3136,0.29215,-4.4963,{"v":6.92e-06,"d":"6.92E-06"},{"v":5.47e-05,"d":"5.47E-05"},"UbiA prenyltransferase family protein. Encodes a protein with chlorophyll synthase activity. This enzyme has been shown to perform the esterification of chlorophyllide (a and b), the last step of chlorophyll biosynthesis. Although it can use either geranylgeranyl pyrophosphate (GGPP) or phytyl pyrophosphate (PhyPP) as substrates, the esterification reaction was faster with GGPP than with PhyPP.","AT3G29385",null,17.473,-3.8746,0.73249,-5.2896,{"v":1.23E-7,"d":"1.23E-07"},{"v":9.4E-7,"d":"9.40E-07"},"dentin sialophosphoprotein-like protein.","AT4G26710","VHA-E2",94.789,-1.4174,0.23725,-5.9742,{"v":2.31e-09,"d":"2.31E-09"},{"v":1.71e-08,"d":"1.71E-08"},"ATPase, V0 complex, subunit E.","AT4G23630","BTI1",3642.5,-0.43564,0.094755,-4.5975,{"v":4.28e-06,"d":"4.28E-06"},{"v":3.09e-05,"d":"3.09E-05"},"full_name=VIRB2-interacting protein 1. VIRB2-interacting protein 1."]
["AT3G27785","MYB118",107.55,-1.0275,0.24639,-4.1703,{"v":3.04E-5,"d":"3.04E-05"},{"v":0.000248,"d":"2.48E-04"},"full_name=myb domain protein 118. myb domain protein 118. Encodes a myb transcription factor that represses endosperm maturation.","AT1G33970","IAN9",365.19,0.58856,0.13092,4.4957,{"v":6.93e-06,"d":"6.93E-06"},{"v":5.48e-05,"d":"5.48E-05"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT5G62400",null,44.631,-1.9258,0.36418,-5.2881,{"v":1.24E-7,"d":"1.24E-07"},{"v":9.47E-7,"d":"9.47E-07"},"transmembrane protein.","AT4G25500","RS40",290.19,0.79252,0.13271,5.9721,{"v":2.34e-09,"d":"2.34E-09"},{"v":1.74E-8,"d":"1.74E-08"},"full_name=arginine/serine-rich splicing factor 40. arginine/serine-rich splicing factor 35. encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926.","AT3G24927",null,1855.6,0.42279,0.09197,4.5971,{"v":4.28e-06,"d":"4.28E-06"},{"v":3.09e-05,"d":"3.09E-05"},"pseudogene. pseudogene of unknown protein"]
["AT2G39280",null,376.72,-0.53867,0.12938,-4.1635,{"v":3.13e-05,"d":"3.13E-05"},{"v":0.000255,"d":"2.55E-04"},"Ypt/Rab-GAP domain of gyp1p superfamily protein.","AT3G08970","ATERDJ3A",251.16,0.67207,0.14968,4.4901,{"v":7.12e-06,"d":"7.12E-06"},{"v":5.61e-05,"d":"5.61E-05"},"DNAJ heat shock N-terminal domain-containing protein. J domain protein localized in ER lumen. Can compensate for the growth defect in jem1 scj1 mutant yeast. Also shows similarity to HSP40 proteins and is induced by heat stress. At high temperatures, mutant alleles are not transmitted through the pollen due to defects in pollen tube growth.","AT3G19910","CTL18",379.03,0.79916,0.15133,5.2809,{"v":1.29E-7,"d":"1.29E-07"},{"v":9.83e-07,"d":"9.83E-07"},"RING/U-box superfamily protein.","AT5G19850",null,143.81,-1.062,0.17796,-5.9678,{"v":2.4E-9,"d":"2.40E-09"},{"v":1.78e-08,"d":"1.78E-08"},"alpha/beta-Hydrolases superfamily protein.","AT1G51600","ZML2",156.87,0.85199,0.18566,4.589,{"v":4.45e-06,"d":"4.45E-06"},{"v":3.21e-05,"d":"3.21E-05"},"full_name=ZIM-LIKE 2. ZIM-LIKE 2. member of a novel family of plant-specific GATA-type transcription factors."]
["AT1G11050",null,125.53,0.8072,0.19411,4.1584,{"v":3.2e-05,"d":"3.20E-05"},{"v":0.00026,"d":"2.60E-04"},"Protein kinase superfamily protein.","AT2G43150","EXT21",122.5,-0.92122,0.2055,-4.4829,{"v":7.36e-06,"d":"7.36E-06"},{"v":5.79e-05,"d":"5.79E-05"},"Proline-rich extensin-like family protein.","AT2G16800","CGF2",190.15,0.85987,0.16303,5.2744,{"v":1.33e-07,"d":"1.33E-07"},{"v":1.02E-6,"d":"1.02E-06"},"high-affinity nickel-transport family protein.","AT3G24503","ALDH2C4",909.09,-0.54282,0.091082,-5.9597,{"v":2.53e-09,"d":"2.53E-09"},{"v":1.86e-08,"d":"1.86E-08"},"full_name=aldehyde dehydrogenase 2C4. aldehyde dehydrogenase 2C4. Arabidopsis thaliana aldehyde dehydrogenase AtALDH1a mRNA. a sinapaldehyde dehydrogenase catalyzes both the oxidation of coniferylaldehyde and sinapaldehyde forming ferulic acid and sinapic acid, respectively","AT4G27780","ACBP2",1241.7,-0.35962,0.078382,-4.588,{"v":4.48e-06,"d":"4.48E-06"},{"v":3.21e-05,"d":"3.21E-05"},"full_name=acyl-CoA binding protein 2. acyl-CoA binding protein 2. Encodes acyl-CoA-binding protein with ankyrin repeats"]
["AT3G50620",null,323.91,0.55074,0.13267,4.1513,{"v":3.31e-05,"d":"3.31E-05"},{"v":0.000267,"d":"2.67E-04"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT4G14320","RPL36AB",861.03,-0.48697,0.10891,-4.4713,{"v":7.78e-06,"d":"7.78E-06"},{"v":6.09e-05,"d":"6.09E-05"},"Zinc-binding ribosomal protein family protein.","AT2G38230","PDX1.1",63.547,1.5423,0.29297,5.2645,{"v":1.41e-07,"d":"1.41E-07"},{"v":1.07e-06,"d":"1.07E-06"},"full_name=pyridoxine biosynthesis 1.1. pyridoxine biosynthesis 1.1. Encodes a protein predicted to function in tandem with PDX2 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis.","AT2G25930","ELF3",393.19,0.70273,0.11805,5.9528,{"v":2.64E-9,"d":"2.64E-09"},{"v":1.94e-08,"d":"1.94E-08"},"full_name=EARLY FLOWERING 3. hydroxyproline-rich glycoprotein family protein. Encodes a nuclear protein that is expressed rhythmically and interacts with phytochrome B to control plant development and flowering through a signal transduction pathway. Required component of the core circadian clock regardless of light conditions.","AT1G64550","ABCF3",736.01,0.41044,0.089662,4.5776,{"v":4.7e-06,"d":"4.70E-06"},{"v":3.37e-05,"d":"3.37E-05"},"full_name=ATP-binding cassette F3. general control non-repressible 3. Encodes a member of GCN subfamily. Predicted to be involved in stress-associated protein translation control. The mutant is affected in MAMP ((microbe-associated molecular patterns)-induced stomatal closure, but not other MAMP-induced responses in the leaves."]
["AT3G12820","MYB10",83.018,0.97666,0.23546,4.1479,{"v":3.36e-05,"d":"3.36E-05"},{"v":0.000271,"d":"2.71E-04"},"full_name=myb domain protein 10. myb domain protein 10. Member of the R2R3 factor gene family.","AT5G44110","ABCI21",24.99,-1.948,0.43594,-4.4686,{"v":7.87e-06,"d":"7.87E-06"},{"v":6.16e-05,"d":"6.16E-05"},"full_name=ATP-binding cassette A21. P-loop containing nucleoside triphosphate hydrolases superfamily protein. Encodes a member of the NAP subfamily of ABC transporters.","AT3G53370",null,285.51,-0.7504,0.14278,-5.2557,{"v":1.47e-07,"d":"1.47E-07"},{"v":1.12e-06,"d":"1.12E-06"},"S1FA-like DNA-binding protein.","AT5G57900","SKIP1",978.34,0.73177,0.123,5.9494,{"v":2.69E-9,"d":"2.69E-09"},{"v":1.97e-08,"d":"1.97E-08"},"full_name=SKP1 interacting partner 1. SKP1 interacting partner 1. F-box protein, interacts with SKP1/ASK1 subunit of SCF ubiquitin ligase in a glucose-dependent manner","AT1G60505",null,89.612,-1.0788,0.2358,-4.5752,{"v":4.76e-06,"d":"4.76E-06"},{"v":3.4E-5,"d":"3.40E-05"},"Natural antisense transcript overlaps with AT1G60510. Potential natural antisense gene, locus overlaps with AT1G60510 Natural antisense transcript overlaps with AT1G60510"]
["AT3G02120",null,5.3768,-5.8141,1.403,-4.1441,{"v":3.41e-05,"d":"3.41E-05"},{"v":0.000275,"d":"2.75E-04"},"hydroxyproline-rich glycoprotein family protein.","AT4G24920",null,644.69,-1.5193,0.34035,-4.4639,{"v":8.05e-06,"d":"8.05E-06"},{"v":6.28e-05,"d":"6.28E-05"},"secE/sec61-gamma protein transport protein.","AT1G71200","CITF1",46.324,1.6063,0.30616,5.2466,{"v":1.55E-7,"d":"1.55E-07"},{"v":1.17E-6,"d":"1.17E-06"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT1G05490","chr31",16.217,-7.6292,1.2834,-5.9448,{"v":2.77e-09,"d":"2.77E-09"},{"v":2.03E-8,"d":"2.03E-08"},"full_name=chromatin remodeling 31. chromatin remodeling 31.","AT4G08230",null,202.13,-0.90874,0.19882,-4.5707,{"v":4.86e-06,"d":"4.86E-06"},{"v":3.46e-05,"d":"3.46E-05"},"glycine-rich protein."]
["AT2G43710","SSI2",5938.8,0.42811,0.10339,4.1409,{"v":3.46e-05,"d":"3.46E-05"},{"v":0.000278,"d":"2.78E-04"},"full_name=suppressor of SA insensitive 2. Plant stearoyl-acyl-carrier-protein desaturase family protein. Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates.","AT1G21080",null,567.75,0.51189,0.1148,4.4588,{"v":8.24e-06,"d":"8.24E-06"},{"v":6.42e-05,"d":"6.42E-05"},"DNAJ heat shock N-terminal domain-containing protein.","AT3G18570",null,1691.5,0.75539,0.1443,5.2348,{"v":1.65e-07,"d":"1.65E-07"},{"v":1.25e-06,"d":"1.25E-06"},"Oleosin family protein.","AT1G73750",null,153.44,-1.3325,0.22456,-5.9337,{"v":2.96e-09,"d":"2.96E-09"},{"v":2.16e-08,"d":"2.16E-08"},"alpha/beta hydrolase family protein.","AT2G47450","CAO",15.093,3.4185,0.74836,4.568,{"v":4.92e-06,"d":"4.92E-06"},{"v":3.5e-05,"d":"3.50E-05"},"full_name=CHAOS. chloroplast signal recognition particle component (CAO). A component of the chloroplast signal recognition particle pathway that is involved in LHCP targeting. It is downregulated in response to high light. It recognizes the DPLG motif in Lhcb1."]
["AT5G51570","HIR3",368.7,0.54773,0.13248,4.1344,{"v":3.56e-05,"d":"3.56E-05"},{"v":0.000285,"d":"2.85E-04"},"SPFH/Band 7/PHB domain-containing membrane-associated protein family.","AT1G50380",null,942.86,0.44235,0.099407,4.4498,{"v":8.59e-06,"d":"8.59E-06"},{"v":6.67e-05,"d":"6.67E-05"},"Prolyl oligopeptidase family protein.","AT5G54130",null,38.623,-2.4855,0.47541,-5.2281,{"v":1.71e-07,"d":"1.71E-07"},{"v":1.29e-06,"d":"1.29E-06"},"Calcium-binding endonuclease/exonuclease/phosphatase family.","AT5G53590","SAUR30",50.954,-1.894,0.31964,-5.9255,{"v":3.11e-09,"d":"3.11E-09"},{"v":2.27e-08,"d":"2.27E-08"},"SAUR-like auxin-responsive protein family.","AT5G18650","MIEL1",89.001,1.0786,0.23647,4.5611,{"v":5.09e-06,"d":"5.09E-06"},{"v":3.61e-05,"d":"3.61E-05"},"CHY-type/CTCHY-type/RING-type Zinc finger protein. Encodes a RING-type E3 ubiquitin ligase that interacts with and ubiquitinates MYB30, leads to MYB30 proteasomal degradation and downregulation of its transcriptional activity. Since MYB30 is a positive regulator of Arabidopsis HR and defence responses, MIEL1 is involved in the negative regulation of these processes."]
["AT5G55960",null,69.408,1.0381,0.25162,4.1256,{"v":3.7e-05,"d":"3.70E-05"},{"v":0.000296,"d":"2.96E-04"},"transmembrane protein C9orf5 protein.","AT3G56090","FER3",31.407,1.8042,0.40599,4.4438,{"v":8.84e-06,"d":"8.84E-06"},{"v":6.85e-05,"d":"6.85E-05"},"full_name=ferritin 3. ferritin 3. Encodes FERRITIN 3, AtFER3. Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life. Function as the main iron store in mammals. Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool.","AT1G15060",null,421.18,0.82879,0.15872,5.2218,{"v":1.77e-07,"d":"1.77E-07"},{"v":1.33E-6,"d":"1.33E-06"},"alpha/beta hydrolase family protein.","AT5G61480","PXY",20.204,-5.042,0.85211,-5.9171,{"v":3.28e-09,"d":"3.28E-09"},{"v":2.38e-08,"d":"2.38E-08"},"full_name=PHLOEM INTERCALATED WITH XYLEM. Leucine-rich repeat protein kinase family protein. Encodes PXY, a receptor-like kinase essential for maintaining polarity during plant vascular-tissue development.","AT2G38470","WRKY33",75.727,4.59,1.007,4.558,{"v":5.17e-06,"d":"5.17E-06"},{"v":3.66e-05,"d":"3.66E-05"},"full_name=WRKY DNA-binding protein 33. WRKY DNA-binding protein 33. Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress."]
["AT3G02740",null,358.56,0.63875,0.15487,4.1243,{"v":3.72e-05,"d":"3.72E-05"},{"v":0.000297,"d":"2.97E-04"},"Eukaryotic aspartyl protease family protein.","AT5G18230","NOT3",828.92,-0.43919,0.098872,-4.442,{"v":8.91e-06,"d":"8.91E-06"},{"v":6.9e-05,"d":"6.90E-05"},"transcription regulator NOT2/NOT3/NOT5 family protein.","AT4G39400","BRI1",441.29,-0.68405,0.13104,-5.2202,{"v":1.79E-7,"d":"1.79E-07"},{"v":1.34e-06,"d":"1.34E-06"},"full_name=BRASSINOSTEROID INSENSITIVE 1. Leucine-rich receptor-like protein kinase family protein. Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. The structure of BRI1 ligand-binding domain has been determined at 2.5A resolution. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus.","AT5G05680","MOS7",157.91,1.1466,0.1938,5.9163,{"v":3.29E-9,"d":"3.29E-09"},{"v":2.39e-08,"d":"2.39E-08"},"full_name=MODIFIER OF SNC1,7. nuclear pore complex protein-like protein. Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs.","AT2G37240",null,6.9444,-6.4167,1.4086,-4.5554,{"v":5.23e-06,"d":"5.23E-06"},{"v":3.7e-05,"d":"3.70E-05"},"Thioredoxin superfamily protein."]
["AT2G44810","DAD1",61.392,1.4907,0.36221,4.1155,{"v":3.86e-05,"d":"3.86E-05"},{"v":0.000307,"d":"3.07E-04"},"full_name=DEFECTIVE ANTHER DEHISCENCE 1. alpha/beta-Hydrolases superfamily protein. Mutant has defects in anther dehiscence, pollen maturation, and flower opening. The DAD1 protein is a chloroplastic phospholipase A1 that catalyzes the initial step of jasmonic acid biosynthesis.","AT5G12080","MSL10",102.25,0.92244,0.20833,4.4278,{"v":9.52e-06,"d":"9.52E-06"},{"v":7.34e-05,"d":"7.34E-05"},"full_name=mechanosensitive channel of small conductance-like 10. mechanosensitive channel of small conductance-like 10. Encodes a mechanosensitive (or stretch-activated) ion channel in the plasma membrane with a moderate preference for anions.","AT5G11600",null,236.78,0.86515,0.16617,5.2065,{"v":1.92E-7,"d":"1.92E-07"},{"v":1.44E-6,"d":"1.44E-06"},"hypothetical protein.","AT5G14580",null,281.09,0.9769,0.16537,5.9072,{"v":3.48E-9,"d":"3.48E-09"},{"v":2.51E-8,"d":"2.51E-08"},"polyribonucleotide nucleotidyltransferase.","AT3G26220","CYP71B3",7.9757,6.2585,1.3766,4.5463,{"v":5.46e-06,"d":"5.46E-06"},{"v":3.84e-05,"d":"3.84E-05"},"full_name=cytochrome P450, family 71, subfamily B, polypeptide 3. cytochrome P450, family 71, subfamily B, polypeptide 3. cytochrome P450 monooxygenase"]
["AT3G54260","TBL36",59.307,-1.166,0.28365,-4.1106,{"v":3.95e-05,"d":"3.95E-05"},{"v":0.000313,"d":"3.13E-04"},"full_name=TRICHOME BIREFRINGENCE-LIKE 36. TRICHOME BIREFRINGENCE-LIKE 36. Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT4G37750","ANT",6.673,-6.1257,1.3858,-4.4202,{"v":9.86e-06,"d":"9.86E-06"},{"v":7.59e-05,"d":"7.59E-05"},"full_name=AINTEGUMENTA. Integrase-type DNA-binding superfamily protein. ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia.","AT1G47710","SERPIN1",595.44,0.66855,0.12854,5.201,{"v":1.98E-7,"d":"1.98E-07"},{"v":1.48E-6,"d":"1.48E-06"},"Serine protease inhibitor (SERPIN) family protein.","AT5G56600","PRF3",73.946,2.3044,0.39037,5.9033,{"v":3.56e-09,"d":"3.56E-09"},{"v":2.57e-08,"d":"2.57E-08"},"full_name=profilin 3. profilin. Encodes profilin3, a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Originally known as profilin5, and later named profilin3. Expressed in vegetative organs.","AT5G64420",null,1164,0.35582,0.078277,4.5456,{"v":5.48E-6,"d":"5.48E-06"},{"v":3.85e-05,"d":"3.85E-05"},"DNA polymerase V family."]
["AT3G03130",null,5.3253,-5.8028,1.4129,-4.1072,{"v":4.01e-05,"d":"4.01E-05"},{"v":0.000317,"d":"3.17E-04"},"lisH domain-like protein.","AT5G66330",null,44.154,-1.4152,0.32059,-4.4145,{"v":1.01E-5,"d":"1.01E-05"},{"v":7.77e-05,"d":"7.77E-05"},"Leucine-rich repeat (LRR) family protein.","AT2G46230",null,290.63,0.75022,0.1445,5.1919,{"v":2.08e-07,"d":"2.08E-07"},{"v":1.55E-6,"d":"1.55E-06"},"PIN domain-like family protein.","AT4G35110","PEARLI 4",31.906,-2.4127,0.409,-5.8991,{"v":3.66e-09,"d":"3.66E-09"},{"v":2.63e-08,"d":"2.63E-08"},"phospholipase-like protein (PEARLI 4) family protein.","AT1G20910","ARID3",173.07,0.77778,0.17161,4.5321,{"v":5.84E-6,"d":"5.84E-06"},{"v":4.09e-05,"d":"4.09E-05"},"ARID/BRIGHT DNA-binding domain-containing protein."]
["AT3G48180",null,41.431,-1.3456,0.32764,-4.1068,{"v":4.01e-05,"d":"4.01E-05"},{"v":0.000318,"d":"3.18E-04"},"CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase.","AT4G24790",null,146.93,-0.81666,0.18514,-4.4111,{"v":1.03E-5,"d":"1.03E-05"},{"v":7.89e-05,"d":"7.89E-05"},"AAA-type ATPase family protein.","AT3G12720","MYB67",47.026,1.5907,0.30653,5.1894,{"v":2.11E-7,"d":"2.11E-07"},{"v":1.57E-6,"d":"1.57E-06"},"full_name=myb domain protein 67. myb domain protein 67. Member of the R2R3 factor gene family.","AT1G68220",null,796.44,0.64446,0.10927,5.8978,{"v":3.68e-09,"d":"3.68E-09"},{"v":2.65e-08,"d":"2.65E-08"},"aerobic coproporphyrinogen-III oxidase (DUF1218).","AT5G22690",null,456.34,0.4974,0.10975,4.5321,{"v":5.84E-6,"d":"5.84E-06"},{"v":4.09e-05,"d":"4.09E-05"},"Disease resistance protein (TIR-NBS-LRR class) family."]
["AT2G21450","CHR34",72.036,-1.0079,0.24566,-4.1029,{"v":4.08e-05,"d":"4.08E-05"},{"v":0.000322,"d":"3.22E-04"},"full_name=chromatin remodeling 34. chromatin remodeling 34.","AT1G47670",null,21.659,-2.0941,0.47539,-4.4051,{"v":1.06E-5,"d":"1.06E-05"},{"v":8.09e-05,"d":"8.09E-05"},"Transmembrane amino acid transporter family protein.","AT4G18210","PUP10",60.47,1.5375,0.29645,5.1862,{"v":2.15e-07,"d":"2.15E-07"},{"v":1.59E-6,"d":"1.59E-06"},"full_name=purine permease 10. purine permease 10. Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.","AT1G54130","RSH3",1090.8,0.63532,0.10783,5.8917,{"v":3.82e-09,"d":"3.82E-09"},{"v":2.74e-08,"d":"2.74E-08"},"full_name=RELA/SPOT homolog 3. RELA/SPOT homolog 3.","AT1G47056","VFB1",509.7,0.49681,0.10966,4.5303,{"v":5.89e-06,"d":"5.89E-06"},{"v":4.12e-05,"d":"4.12E-05"},"full_name=VIER F-box proteine 1. VIER F-box protein 1. Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB2,3, and 4. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes."]
["AT1G03420","Sadhu4-2",46.431,-1.2411,0.30287,-4.0978,{"v":4.17e-05,"d":"4.17E-05"},{"v":0.000329,"d":"3.29E-04"},"full_name=sadhu non-coding retrotransposon 4-2. transposable_element_gene. Member of Sadhu non-coding retrotransposon family","AT3G58690",null,352.11,-0.56011,0.12724,-4.4018,{"v":1.07e-05,"d":"1.07E-05"},{"v":8.2e-05,"d":"8.20E-05"},"Protein kinase superfamily protein.","AT5G04800",null,378.34,0.76094,0.14692,5.1794,{"v":2.23E-7,"d":"2.23E-07"},{"v":1.65e-06,"d":"1.65E-06"},"Ribosomal S17 family protein.","AT4G22758",null,27.359,-2.8789,0.48943,-5.8821,{"v":4.05e-09,"d":"4.05E-09"},{"v":2.9e-08,"d":"2.90E-08"},"PPR containing protein.","AT1G68790","LINC3",1095.7,-0.4202,0.092805,-4.5278,{"v":5.96e-06,"d":"5.96E-06"},{"v":4.16e-05,"d":"4.16E-05"},"full_name=LITTLE NUCLEI3. little nuclei3."]
["AT5G20860",null,696.09,-0.5039,0.12318,-4.0908,{"v":4.3e-05,"d":"4.30E-05"},{"v":0.000338,"d":"3.38E-04"},"Plant invertase/pectin methylesterase inhibitor superfamily.","AT3G04720","PR4",59.038,1.2424,0.28263,4.3959,{"v":1.1E-5,"d":"1.10E-05"},{"v":8.4e-05,"d":"8.40E-05"},"full_name=pathogenesis-related 4. pathogenesis-related 4. Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection.","AT5G09550","GDI",10.902,-6.7252,1.2998,-5.1741,{"v":2.29E-7,"d":"2.29E-07"},{"v":1.69e-06,"d":"1.69E-06"},"full_name=RAB GDP-dissociation inhibitor. GDP dissociation inhibitor family protein / Rab GTPase activator family protein.","AT1G71040","LPR2",15.198,-7.5346,1.2825,-5.8749,{"v":4.23e-09,"d":"4.23E-09"},{"v":3.02e-08,"d":"3.02E-08"},"full_name=Low Phosphate Root2. Cupredoxin superfamily protein. Encodes LPR2. Function together with LPR1 (AT1G23010) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability.","AT3G01350",null,123.28,-0.91797,0.20298,-4.5226,{"v":6.11e-06,"d":"6.11E-06"},{"v":4.25e-05,"d":"4.25E-05"},"Major facilitator superfamily protein."]
["AT5G65360","H3.1",71.931,-1.0056,0.24615,-4.0852,{"v":4.4e-05,"d":"4.40E-05"},{"v":0.000345,"d":"3.45E-04"},"Histone superfamily protein.","AT3G60880","DHDPS1",129.81,0.86137,0.19624,4.3894,{"v":1.14e-05,"d":"1.14E-05"},{"v":8.64e-05,"d":"8.64E-05"},"full_name=dihydrodipicolinate synthase 1. dihydrodipicolinate synthase 1. Encodes a dihydropicolinate synthase involved in lysine biosynthesis. The enzyme is allosterically inhibited by lysine. It is predicted to localize to the cholorplast.","AT2G38700","MVD1",63.809,-1.673,0.32344,-5.1726,{"v":2.31e-07,"d":"2.31E-07"},{"v":1.7E-6,"d":"1.70E-06"},"full_name=mevalonate diphosphate decarboxylase 1. mevalonate diphosphate decarboxylase 1. Encodes mevalonate diphosphate decarboxylase, the enzyme that catalyzes the synthesis of isopentenyl diphosphate, used in sterol and isoprenoid biosynthesis. The protein appears to form a homodimeric complex. Incidentally, it was shown that the Arabidopsis MVD protein could also interact with its yeast homolog to form a heterodimer.","AT3G19810","DUF177A",211.32,0.89993,0.15324,5.8726,{"v":4.29e-09,"d":"4.29E-09"},{"v":3.05e-08,"d":"3.05E-08"},"BTB/POZ domain protein, putative (DUF177).","AT5G60640","PDIL1-4",445.44,-0.5216,0.11546,-4.5177,{"v":6.25e-06,"d":"6.25E-06"},{"v":4.34e-05,"d":"4.34E-05"},"full_name=PDI-like 1-4. PDI-like 1-4. Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants."]
["AT3G10310",null,5.5031,-5.849,1.4331,-4.0815,{"v":4.47e-05,"d":"4.47E-05"},{"v":3.5E-4,"d":"3.50E-04"},"P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein.","AT4G27830","BGLU10",187.57,0.7571,0.17259,4.3867,{"v":1.15E-5,"d":"1.15E-05"},{"v":8.72e-05,"d":"8.72E-05"},"full_name=beta glucosidase 10. beta glucosidase 10. Encodes a beta-glucosidase that may be responsible for acyl-glucose-dependent anthocyanin glucosyltransferase activity in Arabidopsis. In vitro efforts to demonstrate AAGT activity for BGLU10 have been unsuccessful but experiments with mutants in this gene suggest at least an indirect involvement in anthocyanin formation.","AT2G25720",null,159.53,1.1474,0.22229,5.1616,{"v":2.45e-07,"d":"2.45E-07"},{"v":1.8e-06,"d":"1.80E-06"},"hypothetical protein.","AT1G08910","PIAL1",669.45,0.56159,0.095801,5.862,{"v":4.57e-09,"d":"4.57E-09"},{"v":3.25E-8,"d":"3.25E-08"},"zinc ion binding protein. Encodes an SP-RING domain containing protein that functions in sumolaytion and is involved in positive regulation of sulfur metabolism and stress response.","AT5G65840",null,166.67,-0.78654,0.17439,-4.5103,{"v":6.47e-06,"d":"6.47E-06"},{"v":4.48e-05,"d":"4.48E-05"},"Thioredoxin superfamily protein."]
["AT4G21390","B120",39.062,-1.4193,0.34818,-4.0762,{"v":4.58e-05,"d":"4.58E-05"},{"v":3.57E-4,"d":"3.57E-04"},"S-locus lectin protein kinase family protein.","AT3G12320","LNK3",75.398,1.1775,0.26855,4.3846,{"v":1.16e-05,"d":"1.16E-05"},{"v":8.79e-05,"d":"8.79E-05"},"hypothetical protein.","AT5G16620","TIC40",404.71,0.69634,0.13508,5.155,{"v":2.54e-07,"d":"2.54E-07"},{"v":1.86E-6,"d":"1.86E-06"},"full_name=translocon at the inner envelope membrane of chloroplasts 40. hydroxyproline-rich glycoprotein family protein. chloroplast protein import (Tic40)","AT1G19570","DHAR1",1414.5,-0.52849,0.090303,-5.8524,{"v":4.85e-09,"d":"4.85E-09"},{"v":3.43e-08,"d":"3.43E-08"},"full_name=dehydroascorbate reductase. dehydroascorbate reductase. Encodes a member of the dehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica.","AT1G73260","KTI1",17.16,-2.8825,0.63964,-4.5064,{"v":6.59e-06,"d":"6.59E-06"},{"v":4.55e-05,"d":"4.55E-05"},"full_name=kunitz trypsin inhibitor 1. kunitz trypsin inhibitor 1. Encodes a trypsin inhibitor involved in modulating programmed cell death in plant-pathogen interactions."]
["AT3G06760",null,176.52,0.71096,0.17463,4.0711,{"v":4.68e-05,"d":"4.68E-05"},{"v":0.000364,"d":"3.64E-04"},"Drought-responsive family protein.","AT2G19480","NAP1;2",657.01,0.46976,0.1073,4.3781,{"v":1.2E-5,"d":"1.20E-05"},{"v":9.03e-05,"d":"9.03E-05"},"full_name=nucleosome assembly protein 1;2. nucleosome assembly protein 1;2. This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation.","AT4G19120","ERD3",34.195,-2.0424,0.39673,-5.1482,{"v":2.63e-07,"d":"2.63E-07"},{"v":1.92e-06,"d":"1.92E-06"},"full_name=early-responsive to dehydration 3. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT1G69260","AFP1",357.04,-1.0805,0.18492,-5.8429,{"v":5.13e-09,"d":"5.13E-09"},{"v":3.63e-08,"d":"3.63E-08"},"full_name=ABI five binding protein. ABI five binding protein.","AT5G01260",null,17.559,-2.9137,0.6471,-4.5026,{"v":6.71e-06,"d":"6.71E-06"},{"v":4.62e-05,"d":"4.62E-05"},"Carbohydrate-binding-like fold."]
["AT2G29090","CYP707A2",27.681,1.6846,0.41454,4.0638,{"v":4.83e-05,"d":"4.83E-05"},{"v":0.000375,"d":"3.75E-04"},"full_name=cytochrome P450, family 707, subfamily A, polypeptide 2. cytochrome P450, family 707, subfamily A, polypeptide 2. Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. This gene predominantly accumulates in dry seeds and is up-regulated immediately following imbibition. CYP707A2 appears to play a major role in the rapid decrease in ABA levels during early seed imbibition.","AT5G52470","FIB1",1099.8,0.47514,0.10862,4.3742,{"v":1.22E-5,"d":"1.22E-05"},{"v":9.17e-05,"d":"9.17E-05"},"full_name=fibrillarin 1. fibrillarin 1. encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.1f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated.","AT1G77320","MEI1",43.522,1.9846,0.38639,5.1363,{"v":2.8e-07,"d":"2.80E-07"},{"v":2.04E-6,"d":"2.04E-06"},"full_name=meiosis defective 1. transcription coactivator. Mutant is defective in meiosis and produces abnormal microspores. Encodes a BRCT-domain-containing protein that could be specific to the meiotic cell cycle and that plays a crucial role in some DNA repair events independent of SPO11 DSB recombination repair.","AT3G62830","AUD1",824.67,-0.67992,0.11644,-5.8393,{"v":5.24e-09,"d":"5.24E-09"},{"v":3.7E-8,"d":"3.70E-08"},"NAD(P)-binding Rossmann-fold superfamily protein. encodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be membrane-bound by PSORT. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.","AT4G26450",null,681.67,-0.43622,0.096996,-4.4972,{"v":6.88e-06,"d":"6.88E-06"},{"v":4.73e-05,"d":"4.73E-05"},"hypothetical protein."]
["AT3G46210",null,77.493,1.0199,0.25136,4.0574,{"v":4.96e-05,"d":"4.96E-05"},{"v":0.000384,"d":"3.84E-04"},"Ribosomal protein S5 domain 2-like superfamily protein.","AT4G14710","ATARD2",705.64,0.53235,0.12197,4.3645,{"v":1.27E-5,"d":"1.27E-05"},{"v":9.56e-05,"d":"9.56E-05"},"RmlC-like cupins superfamily protein.","AT1G54860",null,7876.3,0.45807,0.089384,5.1248,{"v":2.98e-07,"d":"2.98E-07"},{"v":2.17E-6,"d":"2.17E-06"},"Glycoprotein membrane precursor GPI-anchored.","AT3G50210",null,263.02,0.79593,0.13642,5.8345,{"v":5.4e-09,"d":"5.40E-09"},{"v":3.79e-08,"d":"3.79E-08"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT4G37550","IAMH1",60.494,1.3811,0.30773,4.4881,{"v":7.19e-06,"d":"7.19E-06"},{"v":4.92e-05,"d":"4.92E-05"},"Acetamidase/Formamidase family protein."]
["AT4G12130","COG0354",888.48,0.48703,0.12018,4.0525,{"v":5.07e-05,"d":"5.07E-05"},{"v":0.000392,"d":"3.92E-04"},"Glycine cleavage T-protein family. Encodes a mitochondrial COG0354 protein that requires folate for its function in Fe/S cluster biogenesis.","AT5G53460","GLT1",2429.7,0.54043,0.1239,4.3618,{"v":1.29E-5,"d":"1.29E-05"},{"v":9.66e-05,"d":"9.66E-05"},"full_name=NADH-dependent glutamate synthase 1. NADH-dependent glutamate synthase 1. NADH-dependent glutamate synthase","AT3G57390","AGL18",280.62,-0.76646,0.14969,-5.1205,{"v":3.05e-07,"d":"3.05E-07"},{"v":2.21E-6,"d":"2.21E-06"},"full_name=AGAMOUS-like 18. AGAMOUS-like 18. encodes a MADS-box containing protein likely to be a transcription factor that is expressed in endosperm and developing gametophytes. The protein sequence is most similar to that of AGL15, which is expressed in developing embryos.","AT1G09490",null,109.13,-1.2876,0.22088,-5.8291,{"v":5.57e-09,"d":"5.57E-09"},{"v":3.91e-08,"d":"3.91E-08"},"NAD(P)-binding Rossmann-fold superfamily protein. similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase; Location of EST gb:H37170, gb:H77227 and gb:AA605565","AT1G11170",null,457.76,-0.52909,0.11801,-4.4834,{"v":7.35e-06,"d":"7.35E-06"},{"v":5.02E-5,"d":"5.02E-05"},"lysine ketoglutarate reductase trans-splicing-like protein (DUF707)."]
["AT2G33670","MLO5",4.936,5.8064,1.4352,4.0457,{"v":5.22e-05,"d":"5.22E-05"},{"v":0.000402,"d":"4.02E-04"},"full_name=MILDEW RESISTANCE LOCUS O 5. Seven transmembrane MLO family protein. A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO5 belongs to the clade III, with AtMLO7, AtMLO8, AtMLO9, and AtMLO10. The gene is expressed during seedling growth, in cotyledon vascular system, and in stigma, anther and pollen grains; it was not expressed in rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).","AT4G13750","NOV",96.983,1.0141,0.23288,4.3545,{"v":1.33E-5,"d":"1.33E-05"},{"v":9.96e-05,"d":"9.96E-05"},"full_name=NO VEIN. Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein. Encodes NO VEIN (NOV), a plant-specific nuclear factor required for leaf vascular development, cellular patterning and stem cell maintenance in the root meristem, as well as for cotyledon outgrowth and separation. nov mutations affect many aspects of auxin-dependent development without directly affecting auxin perception.","AT3G55800","SBPASE",53.133,-1.6089,0.31502,-5.1073,{"v":3.27E-7,"d":"3.27E-07"},{"v":2.37e-06,"d":"2.37E-06"},"full_name=sedoheptulose-bisphosphatase. sedoheptulose-bisphosphatase. Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type.","AT4G34215",null,35.202,-2.2227,0.38159,-5.8248,{"v":5.72e-09,"d":"5.72E-09"},{"v":4e-08,"d":"4.00E-08"},"carbohydrate esterase, putative (DUF303). Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds.","AT3G51450",null,130.78,-0.85595,0.1912,-4.4768,{"v":7.58e-06,"d":"7.58E-06"},{"v":5.17e-05,"d":"5.17E-05"},"Calcium-dependent phosphotriesterase superfamily protein."]
["AT5G09460","SACL1",124.18,-0.80891,0.20015,-4.0415,{"v":5.31e-05,"d":"5.31E-05"},{"v":0.000409,"d":"4.09E-04"},"transcription factor bHLH143.","AT1G12120",null,336.8,-0.57527,0.13236,-4.3463,{"v":1.38E-5,"d":"1.38E-05"},{"v":1.03E-4,"d":"1.03E-04"},"hypothetical protein (DUF863).","AT5G67350",null,43.356,1.6481,0.32281,5.1054,{"v":3.3e-07,"d":"3.30E-07"},{"v":2.39E-6,"d":"2.39E-06"},"hypothetical protein.","AT1G29120","UP9",277.98,0.80906,0.13902,5.8199,{"v":5.89e-09,"d":"5.89E-09"},{"v":4.11e-08,"d":"4.11E-08"},"Hydrolase-like protein family.","AT4G03020",null,999.8,-0.37522,0.083897,-4.4725,{"v":7.73e-06,"d":"7.73E-06"},{"v":5.26e-05,"d":"5.26E-05"},"transducin family protein / WD-40 repeat family protein."]
["AT2G16230",null,46.457,-1.3921,0.34454,-4.0406,{"v":5.33e-05,"d":"5.33E-05"},{"v":0.00041,"d":"4.10E-04"},"O-Glycosyl hydrolases family 17 protein.","AT4G02930",null,180.72,0.74045,0.17036,4.3463,{"v":1.38E-5,"d":"1.38E-05"},{"v":1.03E-4,"d":"1.03E-04"},"GTP binding Elongation factor Tu family protein.","AT5G45020",null,57.488,-1.4796,0.28982,-5.1054,{"v":3.3e-07,"d":"3.30E-07"},{"v":2.39E-6,"d":"2.39E-06"},"Glutathione S-transferase family protein.","AT1G71528",null,89.826,1.3246,0.22761,5.8197,{"v":5.9e-09,"d":"5.90E-09"},{"v":4.12e-08,"d":"4.12E-08"},"Natural antisense transcript overlaps with AT1G71530. Potential natural antisense gene, locus overlaps with AT1G71530 Natural antisense transcript overlaps with AT1G71530","AT1G19440","KCS4",388.65,-0.57525,0.12863,-4.472,{"v":7.75e-06,"d":"7.75E-06"},{"v":5.27E-5,"d":"5.27E-05"},"full_name=3-ketoacyl-CoA synthase 4. 3-ketoacyl-CoA synthase 4. Encodes KCS4, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids)."]
["AT5G27740","EMB2775",123.83,-0.7988,0.19794,-4.0356,{"v":5.45e-05,"d":"5.45E-05"},{"v":0.000418,"d":"4.18E-04"},"full_name=EMBRYO DEFECTIVE 2775. ATPase family associated with various cellular activities (AAA). A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.","AT3G53970","PTRE1",525.9,0.49184,0.11326,4.3426,{"v":1.41e-05,"d":"1.41E-05"},{"v":1.05E-4,"d":"1.05E-04"},"proteasome inhibitor-like protein.","AT4G34740","ASE2",275.74,0.80137,0.15724,5.0964,{"v":3.46E-7,"d":"3.46E-07"},{"v":2.5e-06,"d":"2.50E-06"},"full_name=GLN phosphoribosyl pyrophosphate amidotransferase 2. GLN phosphoribosyl pyrophosphate amidotransferase 2. Encodes glutamine 5-phosphoribosylpyrophosphate amidotransferase. Mutants are deficient in leaf, but not cotyledon, plastid and palisade cell development. Mutants exhibit defective chloroplast development under non-low light, suggesting that the defect in chloroplast development is caused by photo-oxidative damage. Plays role in differential development of vascular-associated cells. Demonstrates a cell-specific difference in chloroplast development.Mutant leaves are highly reticulate with a green vascular pattern.","AT3G25810",null,25.091,-6.392,1.0995,-5.8137,{"v":6.11e-09,"d":"6.11E-09"},{"v":4.26e-08,"d":"4.26E-08"},"Terpenoid cyclases/Protein prenyltransferases superfamily protein.","AT5G53020",null,124.26,-0.88279,0.19768,-4.4658,{"v":7.98e-06,"d":"7.98E-06"},{"v":5.42e-05,"d":"5.42E-05"},"Ribonuclease P protein subunit P38-like protein."]
["AT5G43980","PDLP1",52.391,1.1652,0.28937,4.0267,{"v":5.66E-5,"d":"5.66E-05"},{"v":0.000432,"d":"4.32E-04"},"full_name=plasmodesmata-located protein 1. plasmodesmata-located protein 1. Encodes a plasmodesmal protein that affects the intercellular movement of molecules through the plasmodesmata. The cytoplasmic C-terminal portion of the protein is connected to the apoplastic N-terminal portion of the protein by a single transmembrane domain (TMD). It is transported to the plasmodesmata through the secretory pathway. PDLP1 has two DUF26 domains and a signal peptide, but the proper localization of the protein appears to depend on the TMD.","AT1G25440","BBX15",6.1161,-6.0095,1.3867,-4.3336,{"v":1.47E-5,"d":"1.47E-05"},{"v":0.000109,"d":"1.09E-04"},"full_name=B-box domain protein 15. B-box type zinc finger protein with CCT domain-containing protein.","AT1G10740",null,106.94,-1.2967,0.25492,-5.0866,{"v":3.64e-07,"d":"3.64E-07"},{"v":2.62e-06,"d":"2.62E-06"},"alpha/beta-Hydrolases superfamily protein.","AT5G16360",null,140.93,-1.0365,0.17861,-5.8032,{"v":6.51e-09,"d":"6.51E-09"},{"v":4.52e-08,"d":"4.52E-08"},"NC domain-containing protein-like protein.","AT2G32800","AP4.3A",163.94,0.7624,0.17121,4.4531,{"v":8.46e-06,"d":"8.46E-06"},{"v":5.72e-05,"d":"5.72E-05"},"protein kinase family protein."]
["AT4G12750",null,95.912,0.86486,0.21493,4.024,{"v":5.72e-05,"d":"5.72E-05"},{"v":4.37E-4,"d":"4.37E-04"},"Homeodomain-like transcriptional regulator.","AT3G60600","VAP27-1",1028.7,-0.45897,0.10593,-4.3329,{"v":1.47E-5,"d":"1.47E-05"},{"v":0.000109,"d":"1.09E-04"},"full_name=VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1. vesicle associated protein. Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2.","AT3G44630",null,82.777,-1.6766,0.32962,-5.0864,{"v":3.65E-7,"d":"3.65E-07"},{"v":2.62e-06,"d":"2.62E-06"},"Disease resistance protein (TIR-NBS-LRR class) family.","AT2G30695",null,43.574,2.0433,0.35228,5.8003,{"v":6.62e-09,"d":"6.62E-09"},{"v":4.59e-08,"d":"4.59E-08"},"bacterial trigger factor.","AT2G38880","NF-YB1",504,-0.54765,0.12303,-4.4514,{"v":8.53e-06,"d":"8.53E-06"},{"v":5.77E-5,"d":"5.77E-05"},"full_name=nuclear factor Y, subunit B1. nuclear factor Y, subunit B1. Encodes a transcription factor from the nuclear factor Y (NF-Y) family, AtNF-YB1. Confers drought tolerance."]
["AT4G31830",null,2004.5,0.42614,0.10602,4.0193,{"v":5.84e-05,"d":"5.84E-05"},{"v":0.000445,"d":"4.45E-04"},"transmembrane protein.","AT2G22125","CSI1",928.97,-0.43671,0.10086,-4.3297,{"v":1.49E-5,"d":"1.49E-05"},{"v":1.1E-4,"d":"1.10E-04"},"full_name=cellulose synthase-interactive protein 1. binding protein. Encodes a protein involved in cell elongation in root and anther filaments. Mutants have greater cell volumes in root tissues and have additive phenotypes with other cell expansion mutants such as those carrying mutations in COB, QUI and POM1 loci. POM2/CSI1 promotes Cellulose Synthase and microtubule co-alignment.","AT1G13690","ATE1",152.76,1.0014,0.19719,5.0783,{"v":3.81e-07,"d":"3.81E-07"},{"v":2.73e-06,"d":"2.73E-06"},"full_name=ATPase E1. ATPase E1. AtE1 - stimulates the ATPase activity of DnaK/DnaJ","AT5G14640","SK13",171.59,-1.0655,0.1841,-5.7876,{"v":7.14e-09,"d":"7.14E-09"},{"v":4.94e-08,"d":"4.94E-08"},"full_name=shaggy-like kinase 13. shaggy-like kinase 13.","AT2G03730","ACR5",434.91,0.52564,0.1182,4.447,{"v":8.71e-06,"d":"8.71E-06"},{"v":5.87e-05,"d":"5.87E-05"},"full_name=ACT domain repeat 5. ACT domain repeat 5. Member of a small family of ACT domain containing proteins. ACT domains are thought to be involved in amino acid binding."]
["AT5G49660","XIP1",65.347,1.0251,0.25551,4.0121,{"v":6.02E-5,"d":"6.02E-05"},{"v":4.57E-4,"d":"4.57E-04"},"full_name=XYLEM INTERMIXED WITH PHLOEM 1. Leucine-rich repeat transmembrane protein kinase family protein. The gene encodes receptorlike kinase (RLK). Involved in the maintenance organization of cell files or cell morphology in conductive elements. Functions as a receptor for CEP1 peptide. Mediates nitrate uptake signaling.","AT2G38970",null,21.925,-2.0488,0.47371,-4.3249,{"v":1.53e-05,"d":"1.53E-05"},{"v":1.12E-4,"d":"1.12E-04"},"Zinc finger (C3HC4-type RING finger) family protein.","AT5G14120",null,446.1,0.72166,0.14216,5.0763,{"v":3.85e-07,"d":"3.85E-07"},{"v":2.75e-06,"d":"2.75E-06"},"Major facilitator superfamily protein.","AT1G78140",null,268.33,-0.88341,0.15288,-5.7783,{"v":7.55e-09,"d":"7.55E-09"},{"v":5.21e-08,"d":"5.21E-08"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT1G08480","SDH6",419.96,-0.51933,0.11697,-4.4399,{"v":9e-06,"d":"9.00E-06"},{"v":6.05E-5,"d":"6.05E-05"},"full_name=succinate dehydrogenase 6. succinate dehydrogenase subunit. predicted to encode subunit 6 of mitochondrial complex II and to participate in the respiratory chain"]
["AT1G73760","CTL14",97.355,-0.85474,0.21347,-4.0041,{"v":6.23e-05,"d":"6.23E-05"},{"v":0.000472,"d":"4.72E-04"},"RING/U-box superfamily protein.","AT5G35935",null,161.95,-0.77047,0.17825,-4.3223,{"v":1.54e-05,"d":"1.54E-05"},{"v":1.13E-4,"d":"1.13E-04"},"transposable_element_gene.","AT3G50910",null,331.39,0.72794,0.14355,5.0711,{"v":3.95e-07,"d":"3.95E-07"},{"v":2.82e-06,"d":"2.82E-06"},"netrin receptor DCC.","AT4G30710","QWRF8",84.807,-1.3384,0.23178,-5.7746,{"v":7.72e-09,"d":"7.72E-09"},{"v":5.31e-08,"d":"5.31E-08"},"full_name=QWRF domain containing 8. QWRF motif protein (DUF566).","AT5G02250","EMB2730",608.52,0.44144,0.09953,4.4353,{"v":9.2E-6,"d":"9.20E-06"},{"v":6.17e-05,"d":"6.17E-05"},"full_name=EMBRYO DEFECTIVE 2730. Ribonuclease II/R family protein. Encodes a exoribonuclease involved in rRNA processing in mitochondria and chloroplasts.Loss of function mutations are pale green and require supplementation with sucrose for germination and early development. Plants are pale green due to defects in chloroplast biogenesis."]
["AT1G14010",null,553.73,-0.46311,0.11585,-3.9976,{"v":6.4e-05,"d":"6.40E-05"},{"v":4.84E-4,"d":"4.84E-04"},"emp24/gp25L/p24 family/GOLD family protein.","AT1G64610",null,167.91,0.73955,0.17123,4.3192,{"v":1.57e-05,"d":"1.57E-05"},{"v":1.15E-4,"d":"1.15E-04"},"Transducin/WD40 repeat-like superfamily protein.","AT2G03890","PI4K GAMMA 7",477.53,-0.70997,0.14006,-5.0692,{"v":4e-07,"d":"4.00E-07"},{"v":2.84e-06,"d":"2.84E-06"},"full_name=phosphoinositide 4-kinase gamma 7. phosphoinositide 4-kinase gamma 7. Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains.","AT1G23070",null,1538.2,0.78913,0.13677,5.7699,{"v":7.93e-09,"d":"7.93E-09"},{"v":5.45e-08,"d":"5.45E-08"},"organic solute transporter ostalpha protein (DUF300).","AT3G43440","JAZ11",173.53,-0.74856,0.16892,-4.4315,{"v":9.36e-06,"d":"9.36E-06"},{"v":6.27e-05,"d":"6.27E-05"},"full_name=jasmonate-zim-domain protein 11. jasmonate-zim-domain protein 11."]
["AT2G25270",null,134.23,-0.81922,0.20524,-3.9914,{"v":6.57e-05,"d":"6.57E-05"},{"v":0.000496,"d":"4.96E-04"},"transmembrane protein.","AT5G39190","GER2",494,-0.72194,0.16735,-4.3138,{"v":1.6e-05,"d":"1.60E-05"},{"v":1.17E-4,"d":"1.17E-04"},"full_name=germin-like protein 2. germin-like protein 2. germin-like protein (GLP2a)","AT5G63550",null,189.01,1.0601,0.20938,5.0629,{"v":4.13e-07,"d":"4.13E-07"},{"v":2.93e-06,"d":"2.93E-06"},"DEK domain-containing chromatin associated protein.","AT3G13180","TRM4E",64.211,1.6627,0.28852,5.7627,{"v":8.28e-09,"d":"8.28E-09"},{"v":5.68e-08,"d":"5.68E-08"},"NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein.","AT1G04660",null,162.24,-0.95264,0.21519,-4.427,{"v":9.55E-6,"d":"9.55E-06"},{"v":6.39e-05,"d":"6.39E-05"},"glycine-rich protein."]
["AT4G34640","SQS1",220.34,-0.60822,0.15264,-3.9847,{"v":6.76e-05,"d":"6.76E-05"},{"v":0.000509,"d":"5.09E-04"},"full_name=squalene synthase 1. squalene synthase 1. Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway.","AT5G41000","YSL4",69.528,-1.1588,0.26911,-4.3061,{"v":1.66E-5,"d":"1.66E-05"},{"v":1.21E-4,"d":"1.21E-04"},"full_name=YELLOW STRIPE like 4. YELLOW STRIPE like 4. Arabidopsis thaliana metal-nicotianamine transporter YSL4","AT1G07180","NDA1",167.71,1.0012,0.19802,5.0559,{"v":4.28e-07,"d":"4.28E-07"},{"v":3.03e-06,"d":"3.03E-06"},"full_name=alternative NAD(P)H dehydrogenase 1. alternative NAD(P)H dehydrogenase 1. Internal NAD(P)H dehydrogenase in mitochondria. The predicted protein sequence has high homology with other designated NAD(P)H DHs from microorganisms; the capacity for matrix NAD(P)H oxidation via the rotenone-insensitive pathway is significantly reduced in the Atndi1 mutant plant line; the in vitro translation product of AtNDI1 is imported into isolated mitochondria and located on the inside of the inner membrane.","AT3G24050","GATA1",74.534,-1.5697,0.27308,-5.7482,{"v":9.02e-09,"d":"9.02E-09"},{"v":6.17e-08,"d":"6.17E-08"},"full_name=GATA transcription factor 1. GATA transcription factor 1. Encodes a member of the GATA factor family of zinc finger transcription factors.","AT1G15220","CCMH",97.157,0.98916,0.22369,4.4219,{"v":9.78e-06,"d":"9.78E-06"},{"v":6.52e-05,"d":"6.52E-05"},"cytochrome c biogenesis protein family. Encodes a protein with oxidoreductase activity present in the inner membrane of mitochondria. CCMH is postulated to play a central role in mitochondrial cytochrome c maturation, probably as part of a heme lyase complex that also holds activity of reducing apocytochrome c. CCMH interacts with apocytochrome AtCYTc-a and is shown to be present in a 500 kDa-complex along with CcmFN2."]
["AT3G23790","AAE16",128.78,0.79573,0.19988,3.981,{"v":6.86E-5,"d":"6.86E-05"},{"v":0.000515,"d":"5.15E-04"},"full_name=acyl activating enzyme 16. AMP-dependent synthetase and ligase family protein.","AT1G71690",null,14.744,-2.9605,0.68848,-4.3001,{"v":1.71e-05,"d":"1.71E-05"},{"v":0.000124,"d":"1.24E-04"},"glucuronoxylan 4-O-methyltransferase-like protein (DUF579).","AT2G32520",null,45.773,-1.7195,0.34064,-5.0476,{"v":4.47e-07,"d":"4.47E-07"},{"v":3.16e-06,"d":"3.16E-06"},"alpha/beta-Hydrolases superfamily protein.","AT3G05910","ATPAE12",25.626,-6.3986,1.1147,-5.7401,{"v":9.46E-9,"d":"9.46E-09"},{"v":6.45e-08,"d":"6.45E-08"},"Pectinacetylesterase family protein.","AT5G42825",null,1439.1,0.66841,0.15129,4.4181,{"v":9.96e-06,"d":"9.96E-06"},{"v":6.62e-05,"d":"6.62E-05"},"hypothetical protein."]
["AT3G29270",null,376.6,0.49897,0.12543,3.9779,{"v":6.95e-05,"d":"6.95E-05"},{"v":0.000521,"d":"5.21E-04"},"RING/U-box superfamily protein.","AT2G34730",null,406.99,0.5474,0.12739,4.297,{"v":1.73E-5,"d":"1.73E-05"},{"v":1.26E-4,"d":"1.26E-04"},"myosin heavy chain-like protein.","AT3G61530","PANB2",140.71,0.92605,0.18363,5.0429,{"v":4.58E-7,"d":"4.58E-07"},{"v":3.23E-6,"d":"3.23E-06"},"Phosphoenolpyruvate carboxylase family protein. Encodes a ketopentoate hydroxymethyltransferase that appears to localize to the mitochondria. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis.","AT5G47635",null,19.366,-5.011,0.87391,-5.7341,{"v":9.81e-09,"d":"9.81E-09"},{"v":6.67e-08,"d":"6.67E-08"},"Pollen Ole e 1 allergen and extensin family protein.","AT1G17640","RBGD1",496.66,0.47033,0.10653,4.415,{"v":1.01E-5,"d":"1.01E-05"},{"v":6.7e-05,"d":"6.70E-05"},"RNA-binding (RRM/RBD/RNP motifs) family protein."]
["AT5G08415","LIP1",469.16,-0.47884,0.12045,-3.9754,{"v":7.03e-05,"d":"7.03E-05"},{"v":0.000526,"d":"5.26E-04"},"Radical SAM superfamily protein.","AT5G43580","UPI",49.956,4.1965,0.977,4.2953,{"v":1.74e-05,"d":"1.74E-05"},{"v":1.26E-4,"d":"1.26E-04"},"full_name=UNUSUAL SERINE PROTEASE INHIBITOR. Serine protease inhibitor, potato inhibitor I-type family protein. Predicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Functions in resistance to necrotrophic fungi and insect herbivory. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860.","AT4G35320",null,16.076,-4.0229,0.79847,-5.0382,{"v":4.7E-7,"d":"4.70E-07"},{"v":3.3e-06,"d":"3.30E-06"},"hypothetical protein.","AT4G27780","ACBP2",1361.7,-0.53257,0.093052,-5.7233,{"v":1.04E-8,"d":"1.04E-08"},{"v":7.09e-08,"d":"7.09E-08"},"full_name=acyl-CoA binding protein 2. acyl-CoA binding protein 2. Encodes acyl-CoA-binding protein with ankyrin repeats","AT1G08820","VAP27-2",260.32,0.66265,0.15025,4.4103,{"v":1.03E-5,"d":"1.03E-05"},{"v":6.83e-05,"d":"6.83E-05"},"full_name=vamp/synaptobrevin-associated protein 27-2. vamp/synaptobrevin-associated protein 27-2. Encodes VAP33-like protein that interacts with cowpea mosaic virus protein 60K. Is a SNARE-like protein that may be involved in vesicular transport to or from the ER."]
["AT3G63530","BB",33.308,-1.4685,0.36946,-3.9746,{"v":7.05e-05,"d":"7.05E-05"},{"v":0.000527,"d":"5.27E-04"},"full_name=BIG BROTHER. RING/U-box superfamily protein. Encodes a novel E3 ubiquitin ligase that acts as a central negative regulator of Arabidopsis floral organ size. Organ size is limited by restricting the period of proliferative growth, rather than the rate of growth and appears to act in a novel pathway, independent of ANT and JAG. Both mRNA and protein are expressed in all actively growing regions of the plant and the vasculature and the protein is rapidly turned over by proteasome-mediated degradation.","AT3G24830",null,1054.7,-0.48018,0.11179,-4.2953,{"v":1.74e-05,"d":"1.74E-05"},{"v":1.26E-4,"d":"1.26E-04"},"Ribosomal protein L13 family protein.","AT5G20160",null,343.39,0.70575,0.14015,5.0358,{"v":4.76e-07,"d":"4.76E-07"},{"v":3.34e-06,"d":"3.34E-06"},"Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein.","AT5G01720","RAE1",400.45,0.8406,0.14691,5.7218,{"v":1.05E-8,"d":"1.05E-08"},{"v":7.15e-08,"d":"7.15E-08"},"RNI-like superfamily protein.","AT3G06810","IBR3",2161.2,-0.33829,0.076705,-4.4103,{"v":1.03E-5,"d":"1.03E-05"},{"v":6.83e-05,"d":"6.83E-05"},"full_name=IBA-RESPONSE 3. acyl-CoA dehydrogenase-like protein. Encodes a protein with similarity to acyl-CoA dehydrogenases. Mutations in IBR3 render plants resistant to indole-3-butryic acid, a putative storage form of the biologically active auxin IAA (indole-3-acetic acid). IBR3 is hypothesized to carry out the second step in a &#946;-oxidation-like process of IBA metabolism in Arabidopsis. Though its subcellular location has not been determined, IBR3 has a peroxisomal targeting sequence and two other putative IBA metabolic enzymes (IBR1 and IBR10) can be found in this organelle. No specific enzymatic activity has been documented for IBR3, but double mutant analyses with CHY1 argue against a role for IBR3 in general fatty acid &#946;-oxidation."]
["AT1G08860","BON3",43.642,-1.4454,0.3642,-3.9688,{"v":7.22e-05,"d":"7.22E-05"},{"v":0.000538,"d":"5.38E-04"},"full_name=BONZAI 3. Calcium-dependent phospholipid-binding Copine family protein. Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death.","AT3G42860",null,78.001,1.0109,0.23579,4.2871,{"v":1.81e-05,"d":"1.81E-05"},{"v":0.000131,"d":"1.31E-04"},"zinc knuckle (CCHC-type) family protein.","AT3G26730",null,974.81,0.57338,0.11404,5.028,{"v":4.96e-07,"d":"4.96E-07"},{"v":3.47e-06,"d":"3.47E-06"},"RING/U-box superfamily protein.","AT2G01580",null,22.337,-7.1189,1.2452,-5.717,{"v":1.08e-08,"d":"1.08E-08"},{"v":7.34e-08,"d":"7.34E-08"},"transmembrane protein.","AT3G63400",null,1494.4,0.39172,0.08892,4.4053,{"v":1.06E-5,"d":"1.06E-05"},{"v":6.97E-5,"d":"6.97E-05"},"Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein."]
["AT2G44910","HB4",134.57,0.7742,0.19516,3.9671,{"v":7.28e-05,"d":"7.28E-05"},{"v":0.000541,"d":"5.41E-04"},"full_name=homeobox-leucine zipper protein 4. homeobox-leucine zipper protein 4. Encodes a homeodomain protein whose expression displays a dependence on phyB for both red and far-red light response. Also involved in the shade avoidance syndrome.","AT5G59590","UGT76E2",152.04,-0.78104,0.18242,-4.2815,{"v":1.86e-05,"d":"1.86E-05"},{"v":1.34E-4,"d":"1.34E-04"},"full_name=UDP-glucosyl transferase 76E2. UDP-glucosyl transferase 76E2.","AT4G36945",null,106.41,-1.0856,0.21603,-5.0253,{"v":5.03e-07,"d":"5.03E-07"},{"v":3.51e-06,"d":"3.51E-06"},"PLC-like phosphodiesterases superfamily protein.","AT5G19660","S1P",212.26,0.89328,0.1564,5.7114,{"v":1.12e-08,"d":"1.12E-08"},{"v":7.57e-08,"d":"7.57E-08"},"full_name=SITE-1 protease. SITE-1 protease. S1P appears to function as a Golgi-localized subtilase and to help protect seedlings against salt and osmotic stress. The roots of s1p-3 mutants are hypersensitive to NaCl, KCl, LiCl, and mannitol. Several salt-stress responsive genes show weaker induction in an s1P-3 mutant background. The proteolytic cleavage of the bZIP17 transcription factor depends on S1P in vitro. And there is evidence that S1P can cleave bZIP17 in vitro.","AT3G48390","MRF4",173,0.79258,0.18008,4.4014,{"v":1.08E-5,"d":"1.08E-05"},{"v":7.08E-5,"d":"7.08E-05"},"MA3 domain-containing protein."]
["AT2G24270","ALDH11A3",2813.7,-0.52692,0.13295,-3.9634,{"v":7.39e-05,"d":"7.39E-05"},{"v":0.000549,"d":"5.49E-04"},"full_name=aldehyde dehydrogenase 11A3. aldehyde dehydrogenase 11A3. Encodes a protein with non-phosphorylating NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity. The activity of the enzyme was determined from leaf extracts; the enzyme has not been purified to confirm activity.","AT5G48100","TT10",4092.9,0.40162,0.093957,4.2745,{"v":1.92e-05,"d":"1.92E-05"},{"v":0.000138,"d":"1.38E-04"},"full_name=TRANSPARENT TESTA 10. Laccase/Diphenol oxidase family protein. Encodes a protein that is similar to laccase-like polyphenol oxidases. Involved in lignin and flavonoids biosynthesis. It has four conserved copper binding domains. Expressed in developing testa, where it colocalizes with the flavonoid end products proanthocyanidins and flavonols. Mutant plants exhibited a delay in developmentally determined browning of the testa, characterized by the pale brown color of seed coat. The tt10 mutant seeds accumulate more epicatechin monomers and more soluble proanthocyanidins than wild-type seeds. Flavonol composition was also affected in tt10 seeds, which exhibited a higher ratio of quercetin rhamnoside monomers versus dimers than wild-type seeds.","AT3G01100","HYP1",908.88,0.78613,0.15647,5.0243,{"v":5.05e-07,"d":"5.05E-07"},{"v":3.52e-06,"d":"3.52E-06"},"full_name=hypothetical protein 1. hypothetical protein 1. unknown protein, has cDNAs and ESTs associated to it","AT4G15260",null,59.732,1.623,0.28443,5.7059,{"v":1.16E-8,"d":"1.16E-08"},{"v":7.8e-08,"d":"7.80E-08"},"UDP-Glycosyltransferase superfamily protein.","AT2G27240",null,7.205,-6.4565,1.4681,-4.3979,{"v":1.09e-05,"d":"1.09E-05"},{"v":7.18e-05,"d":"7.18E-05"},"aluminum activated malate transporter family protein."]
["AT4G35620","CYCB2;2",4.8182,-5.6513,1.4273,-3.9593,{"v":7.52e-05,"d":"7.52E-05"},{"v":0.000557,"d":"5.57E-04"},"full_name=Cyclin B2;2. Cyclin B2;2.","AT1G20950",null,68.307,-1.2007,0.28116,-4.2705,{"v":1.95E-5,"d":"1.95E-05"},{"v":0.00014,"d":"1.40E-04"},"Phosphofructokinase family protein.","AT3G45260","BIB",21.538,-2.6112,0.52062,-5.0157,{"v":5.28e-07,"d":"5.28E-07"},{"v":3.68e-06,"d":"3.68E-06"},"C2H2-like zinc finger protein.","AT3G26890",null,461.04,0.65488,0.11486,5.7016,{"v":1.19e-08,"d":"1.19E-08"},{"v":7.99e-08,"d":"7.99E-08"},"meiosis chromosome segregation family protein.","AT4G19860",null,1203,-0.35559,0.080937,-4.3934,{"v":1.12e-05,"d":"1.12E-05"},{"v":7.32e-05,"d":"7.32E-05"},"alpha/beta-Hydrolases superfamily protein. Encodes a cytosolic calcium-independent phospholipase A."]
["AT4G38600","KAK",1984.9,0.37867,0.095767,3.9541,{"v":7.68e-05,"d":"7.68E-05"},{"v":0.000568,"d":"5.68E-04"},"full_name=KAKTUS. HECT ubiquitin protein ligase family protein KAK. encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.","AT1G48510","SURF1B",22.094,-1.9808,0.46448,-4.2645,{"v":2e-05,"d":"2.00E-05"},{"v":0.000143,"d":"1.43E-04"},"Surfeit locus 1 cytochrome c oxidase biogenesis protein.","AT1G21080",null,727.47,0.63928,0.12776,5.0039,{"v":5.62e-07,"d":"5.62E-07"},{"v":3.9e-06,"d":"3.90E-06"},"DNAJ heat shock N-terminal domain-containing protein.","AT5G49460","ACLB-2",23.068,-3.3492,0.58816,-5.6943,{"v":1.24E-8,"d":"1.24E-08"},{"v":8.32e-08,"d":"8.32E-08"},"full_name=ATP citrate lyase subunit B 2. ATP citrate lyase subunit B 2. One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL)","AT4G22530",null,84.3,1.1037,0.25138,4.3904,{"v":1.13E-5,"d":"1.13E-05"},{"v":7.4e-05,"d":"7.40E-05"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein."]
["AT5G24080",null,10.066,3.0115,0.76249,3.9495,{"v":7.83e-05,"d":"7.83E-05"},{"v":0.000578,"d":"5.78E-04"},"Protein kinase superfamily protein.","AT1G07870",null,258.94,-0.61312,0.14399,-4.2582,{"v":2.06e-05,"d":"2.06E-05"},{"v":1.47E-4,"d":"1.47E-04"},"Protein kinase superfamily protein.","AT5G48480",null,94.292,-1.1899,0.23795,-5.0007,{"v":5.71e-07,"d":"5.71E-07"},{"v":3.96e-06,"d":"3.96E-06"},"Lactoylglutathione lyase / glyoxalase I family protein.","AT1G09710","DP1",53.806,1.8007,0.31645,5.6901,{"v":1.27E-8,"d":"1.27E-08"},{"v":8.5e-08,"d":"8.50E-08"},"Homeodomain-like superfamily protein.","AT3G20120","CYP705A21",255.73,-0.66842,0.15241,-4.3858,{"v":1.16e-05,"d":"1.16E-05"},{"v":7.54e-05,"d":"7.54E-05"},"full_name=cytochrome P450, family 705, subfamily A, polypeptide 21. cytochrome P450, family 705, subfamily A, polypeptide 21. member of CYP705A"]
["AT3G47290","PLC8",116.95,-0.80319,0.20374,-3.9423,{"v":8.07e-05,"d":"8.07E-05"},{"v":0.000593,"d":"5.93E-04"},"full_name=phosphatidylinositol-speciwc phospholipase C8. phosphatidylinositol-speciwc phospholipase C8.","AT2G24500","FZF",238.56,0.65877,0.15494,4.2517,{"v":2.12E-5,"d":"2.12E-05"},{"v":0.000151,"d":"1.51E-04"},"Zinc finger protein 622. Encodes a C2H2 zinc finger protein FZF.","AT1G29220",null,231.5,0.76012,0.15218,4.9949,{"v":5.89e-07,"d":"5.89E-07"},{"v":4.06e-06,"d":"4.06E-06"},"transcriptional regulator family protein.","AT4G39400","BRI1",260.64,-0.84087,0.14799,-5.6817,{"v":1.33E-8,"d":"1.33E-08"},{"v":8.9e-08,"d":"8.90E-08"},"full_name=BRASSINOSTEROID INSENSITIVE 1. Leucine-rich receptor-like protein kinase family protein. Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. The structure of BRI1 ligand-binding domain has been determined at 2.5A resolution. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus.","AT4G21902",null,16.899,-2.509,0.5741,-4.3703,{"v":1.24E-5,"d":"1.24E-05"},{"v":8.07e-05,"d":"8.07E-05"},"hypothetical protein."]
["AT2G02480","STI",104.48,-1.0117,0.25681,-3.9393,{"v":8.17e-05,"d":"8.17E-05"},{"v":0.0006,"d":"6.00E-04"},"full_name=STICHEL. AAA-type ATPase family protein. STICHEL mutant shows trichomes with fewer than normal branches.","AT1G17145",null,362.49,0.55789,0.13131,4.2486,{"v":2.15e-05,"d":"2.15E-05"},{"v":0.000153,"d":"1.53E-04"},"RING/U-box superfamily protein.","AT3G15530",null,81.164,-1.3311,0.2667,-4.991,{"v":6.01e-07,"d":"6.01E-07"},{"v":4.14e-06,"d":"4.14E-06"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT1G72180","CEPR2",29.18,-2.8429,0.5008,-5.6766,{"v":1.37E-8,"d":"1.37E-08"},{"v":9.15e-08,"d":"9.15E-08"},"Leucine-rich receptor-like protein kinase family protein. Encodes a leucine-rich repeat receptor kinase that functions as a receptor for CEP1 peptide. Mediates nitrate uptake signaling.","AT1G33520","MOS2",692.88,0.44327,0.1015,4.367,{"v":1.26E-5,"d":"1.26E-05"},{"v":8.18e-05,"d":"8.18E-05"},"full_name=modifier of snc1, 2. D111/G-patch domain-containing protein. Has single homolog in Arabidopsis, also homologs in human, mouse and C. elegans; contains one G-patch domain (known to mediate RNA-protein interactions) and two KOW domains (may bind RNA and/or protein); localized to the nucleus; mutant suppresses high SA levels and constitutive disease resistance in snc1 npr1 background; required for basal resistance against Pseudomonas syringae maculicola ES4326 and R gene-mediated resistance specified by RPM1, PPS4 and RPP4;"]
["AT3G44770",null,15.439,-2.4276,0.61671,-3.9365,{"v":8.27e-05,"d":"8.27E-05"},{"v":0.000606,"d":"6.06E-04"},"transmembrane protein, putative (DUF626).","AT2G20300","ALE2",150.69,-0.75446,0.1778,-4.2434,{"v":2.2e-05,"d":"2.20E-05"},{"v":1.56E-4,"d":"1.56E-04"},"full_name=Abnormal Leaf Shape 2. Protein kinase superfamily protein. Encodes ABNORMAL LEAF SHAPE 2 (ALE2), a receptor-like protein kinase (RLK) with a cluster of basic amino acid residues followed by a cysteine-containing sequence in the putative extracellular domain. Function together with ACR4 (Arabidopsis homolog of the Crinkly4) and ALE1 in positively regulating protoderm-specific gene expression and for the formation of leafy organs. ale2 mutants have various epidermal defects, including disorganization of epidermis-related tissues, defects in the leaf cuticle and the fusion of organs.","AT1G47340",null,231.13,0.78403,0.15719,4.9879,{"v":6.1e-07,"d":"6.10E-07"},{"v":4.2e-06,"d":"4.20E-06"},"F-box and associated interaction domains-containing protein.","AT3G12740","ALIS1",225.01,-0.92228,0.16264,-5.6707,{"v":1.42E-8,"d":"1.42E-08"},{"v":9.46E-8,"d":"9.46E-08"},"full_name=ALA-interacting subunit 1. ALA-interacting subunit 1. Physically interacts with ALA3, and is required for the phospholipid translocase activity of ALA3.","AT3G29090","PME31",878.33,-0.382,0.087542,-4.3636,{"v":1.28e-05,"d":"1.28E-05"},{"v":8.29e-05,"d":"8.29E-05"},"full_name=pectin methylesterase 31. pectin methylesterase 31. Encodes an atypical pectin methylesterase that does not require salt for its activity and has a blockwise mode of pectin demethylesterification."]
["AT3G42850","ARA2",23.791,-1.9463,0.49517,-3.9305,{"v":8.48e-05,"d":"8.48E-05"},{"v":0.000619,"d":"6.19E-04"},"Mevalonate/galactokinase family protein.","AT5G14550",null,158.94,-0.73643,0.17377,-4.238,{"v":2.26E-5,"d":"2.26E-05"},{"v":0.00016,"d":"1.60E-04"},"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein.","AT1G19450",null,90.225,-1.1893,0.23869,-4.9825,{"v":6.28e-07,"d":"6.28E-07"},{"v":4.31e-06,"d":"4.31E-06"},"Major facilitator superfamily protein.","AT5G10300","MES5",272.16,1.003,0.17729,5.6573,{"v":1.54e-08,"d":"1.54E-08"},{"v":1.02E-7,"d":"1.02E-07"},"full_name=methyl esterase 5. methyl esterase 5. Encodes a protein with R-selective hydroxynitrile lyase activity. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.","AT3G56450","ALPHA-SNAP1",115.06,-0.91691,0.21022,-4.3617,{"v":1.29E-5,"d":"1.29E-05"},{"v":8.34e-05,"d":"8.34E-05"},"full_name=alpha-soluble NSF attachment protein 1. alpha-soluble NSF attachment protein 1. member of alpha-SNAP Gene Family"]
["AT2G24070","QWRF4",22.292,-1.7747,0.45189,-3.9273,{"v":8.59e-05,"d":"8.59E-05"},{"v":0.000626,"d":"6.26E-04"},"full_name=QWRF domain containing 4. QWRF motif protein (DUF566).","AT4G16160","ATOEP16-2",9192.9,0.44029,0.10405,4.2316,{"v":2.32e-05,"d":"2.32E-05"},{"v":1.64E-4,"d":"1.64E-04"},"Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein. Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family. Two OEP16 genes are closely related to each other and are conserved in all land plants, OEP16-2, also named OEP16-S, and OEP16-1 (renamed OEP16-L) are result of the gene duplication event that occurred prior to divergence of bryophytes and seed plants. Predominantly expressed in seed and is not inducible by cold treatment. atOEP16-S gained an additional exon. The promoter region of atOEP16-S (but not atOEP16-L) contains multiple G-box ABA-responsive elements. The atOEP16-S promoter conferred developmentally regulated seed- and pollen-specific GUS expression in tobacco.","AT1G09780","iPGAM1",68.008,-1.3253,0.26624,-4.9779,{"v":6.43e-07,"d":"6.43E-07"},{"v":4.4e-06,"d":"4.40E-06"},"full_name=2,3-biphosphoglycerate-independent phosphoglycerate mutase 1. Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent. Encodes a 2,3-biphosphoglycerate-independent phosphoglycerate mutase that is involved in pollen development and stomatal movement.","AT1G66360","CAR2",13.115,-7.3197,1.2948,-5.6533,{"v":1.57e-08,"d":"1.57E-08"},{"v":1.04E-7,"d":"1.04E-07"},"Calcium-dependent lipid-binding (CaLB domain) family protein.","AT5G56680","SYNC1",502.88,0.47762,0.10959,4.3581,{"v":1.31E-5,"d":"1.31E-05"},{"v":8.46e-05,"d":"8.46E-05"},"Class II aminoacyl-tRNA and biotin synthetases superfamily protein. Encodes a putative cytosolic asparaginyl-tRNA synthetase."]
["AT2G35350","PLL1",80.352,-0.98128,0.25011,-3.9233,{"v":8.73e-05,"d":"8.73E-05"},{"v":0.000636,"d":"6.36E-04"},"full_name=poltergeist like 1. poltergeist like 1. Encodes a protein most similar to the POLTERGEIST locus. Double mutant analysis of loss of function alleles indicate PLL1 functions redundantly with POL to regulate meristem size and pedicel length. Acts in a dose dependent manner with POL to suppress the clv1, clv2 and clv3 phenotypes.","AT2G40140","CZF1",278.41,0.67632,0.16002,4.2264,{"v":2.37E-5,"d":"2.37E-05"},{"v":0.000167,"d":"1.67E-04"},"zinc finger (CCCH-type) family protein.","AT3G25495",null,560.8,0.60889,0.12239,4.975,{"v":6.53e-07,"d":"6.53E-07"},{"v":4.46e-06,"d":"4.46E-06"},"pseudogene. pseudogene of leucine-rich repeat protein","AT2G19480","NAP1;2",1097.3,0.50532,0.089576,5.6412,{"v":1.69e-08,"d":"1.69E-08"},{"v":1.12E-7,"d":"1.12E-07"},"full_name=nucleosome assembly protein 1;2. nucleosome assembly protein 1;2. This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation.","AT2G05215",null,47.52,1.3883,0.31909,4.3507,{"v":1.36E-5,"d":"1.36E-05"},{"v":8.74e-05,"d":"8.74E-05"}]
["AT4G34881",null,172.83,0.8692,0.22182,3.9185,{"v":8.91e-05,"d":"8.91E-05"},{"v":0.000647,"d":"6.47E-04"},"transmembrane protein.","AT4G28760","TRM20",429.55,0.50655,0.11997,4.2224,{"v":2.42e-05,"d":"2.42E-05"},{"v":0.00017,"d":"1.70E-04"},"full_name=TON1 Recruiting Motif 20. methyl-coenzyme M reductase II subunit gamma, putative (DUF3741).","AT3G07970","QRT2",31.637,-2.2972,0.46219,-4.9702,{"v":6.69e-07,"d":"6.69E-07"},{"v":4.56e-06,"d":"4.56E-06"},"full_name=QUARTET 2. Pectin lyase-like superfamily protein. Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.","AT2G05580",null,175350,-0.83848,0.14874,-5.6373,{"v":1.73e-08,"d":"1.73E-08"},{"v":1.14E-7,"d":"1.14E-07"},"Glycine-rich protein family.","AT4G31398",null,31.317,-1.7059,0.39252,-4.3461,{"v":1.39e-05,"d":"1.39E-05"},{"v":8.9e-05,"d":"8.90E-05"},"Natural antisense transcript overlaps with AT4G31400. Potential natural antisense gene, locus overlaps with AT4G31400 Natural antisense transcript overlaps with AT4G31400"]
["AT2G36010","E2F3",17.71,-2.0406,0.52077,-3.9184,{"v":8.91e-05,"d":"8.91E-05"},{"v":0.000647,"d":"6.47E-04"},"full_name=E2F transcription factor 3. E2F transcription factor 3. Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway.","AT1G62333",null,2195.7,-0.49969,0.11839,-4.2207,{"v":2.44E-5,"d":"2.44E-05"},{"v":0.000171,"d":"1.71E-04"},"hypothetical protein.","AT3G01210","BPL6",251.88,0.76303,0.15354,4.9694,{"v":6.72e-07,"d":"6.72E-07"},{"v":4.58e-06,"d":"4.58E-06"},"RNA-binding (RRM/RBD/RNP motifs) family protein.","AT5G03700",null,51.628,1.8046,0.32028,5.6343,{"v":1.76e-08,"d":"1.76E-08"},{"v":1.16e-07,"d":"1.16E-07"},"D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein.","AT5G56540","AGP14",16.014,-2.9548,0.67996,-4.3455,{"v":1.39e-05,"d":"1.39E-05"},{"v":8.92E-5,"d":"8.92E-05"},"full_name=arabinogalactan protein 14. arabinogalactan protein 14. Encodes arabinogalactan protein (AGP14). Mutants exhibit longer root hairs."]
["AT5G44670","GALS2",68.89,0.97169,0.24852,3.91,{"v":9.23e-05,"d":"9.23E-05"},{"v":0.000668,"d":"6.68E-04"},"full_name=galactan synthase 2. glycosyltransferase family protein (DUF23).","AT3G01690",null,108.92,-0.86738,0.2061,-4.2085,{"v":2.57e-05,"d":"2.57E-05"},{"v":0.00018,"d":"1.80E-04"},"alpha/beta-Hydrolases superfamily protein.","AT5G10950",null,326.59,0.94788,0.19088,4.9658,{"v":6.84e-07,"d":"6.84E-07"},{"v":4.65e-06,"d":"4.65E-06"},"Tudor/PWWP/MBT superfamily protein.","AT5G07210","RR21",12.903,-7.2968,1.2957,-5.6317,{"v":1.78e-08,"d":"1.78E-08"},{"v":1.17E-7,"d":"1.17E-07"},"full_name=response regulator 21. response regulator 21. member of Response Regulator: B- Type","AT1G04300","MUSE13",1206.3,1.2715,0.29284,4.3422,{"v":1.41e-05,"d":"1.41E-05"},{"v":9.04e-05,"d":"9.04E-05"},"TRAF-like superfamily protein."]
["AT1G23560",null,71.399,-1.2353,0.31641,-3.9041,{"v":9.46e-05,"d":"9.46E-05"},{"v":0.000683,"d":"6.83E-04"},"OBP32pep, putative (DUF220).","AT5G09800",null,30.377,1.9936,0.47406,4.2055,{"v":2.61e-05,"d":"2.61E-05"},{"v":0.000182,"d":"1.82E-04"},"ARM repeat superfamily protein.","AT2G27360",null,392.26,-0.70874,0.14292,-4.9588,{"v":7.09e-07,"d":"7.09E-07"},{"v":4.81e-06,"d":"4.81E-06"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT5G53120","SPDS3",427.19,-0.81256,0.14431,-5.6306,{"v":1.8e-08,"d":"1.80E-08"},{"v":1.18E-7,"d":"1.18E-07"},"full_name=spermidine synthase 3. spermidine synthase 3. encodes a novel spermine synthase and is a paralog of previously characterized spermidine synthases, SPDS1 and SPDS2. SPDS3 forms heterodimers with SDPS2, which in turn forms heterodimers with SDPS1 in vivo. The gene does not complement speDelta3 deficiency of spermidine synthase in yeast but DOES complement speDelta4 deficiency.","AT1G02370",null,235.96,-0.63693,0.14688,-4.3364,{"v":1.45E-5,"d":"1.45E-05"},{"v":9.26e-05,"d":"9.26E-05"},"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT3G62300","DUF7",193.77,-0.63887,0.16373,-3.9019,{"v":9.54e-05,"d":"9.54E-05"},{"v":0.000688,"d":"6.88E-04"},"full_name=DOMAIN OF UNKNOWN FUNCTION 724 7. agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 7). Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype","AT1G69070",null,161.59,0.72021,0.17142,4.2015,{"v":2.65E-5,"d":"2.65E-05"},{"v":1.85E-4,"d":"1.85E-04"},"nucleolar-like protein.","AT5G52050","DTX50",55.428,1.4112,0.28475,4.956,{"v":7.2e-07,"d":"7.20E-07"},{"v":4.87E-6,"d":"4.87E-06"},"MATE efflux family protein.","AT5G37020","ARF8",158.33,-1.0262,0.18245,-5.6247,{"v":1.86e-08,"d":"1.86E-08"},{"v":1.22e-07,"d":"1.22E-07"},"full_name=auxin response factor 8. auxin response factor 8. Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF6 to control stamen elongation and flower maturation. Expression of ARF8 is controlled by miR167.","AT5G46840",null,1118.8,0.39332,0.090781,4.3327,{"v":1.47E-5,"d":"1.47E-05"},{"v":9.4e-05,"d":"9.40E-05"},"RNA-binding (RRM/RBD/RNP motifs) family protein."]
["AT2G34840","&#949;2-COP",75.222,-0.93923,0.24113,-3.8952,{"v":9.81e-05,"d":"9.81E-05"},{"v":0.000706,"d":"7.06E-04"},"Coatomer epsilon subunit.","AT2G32800","AP4.3A",121.75,0.92748,0.22105,4.1958,{"v":2.72E-5,"d":"2.72E-05"},{"v":0.000189,"d":"1.89E-04"},"protein kinase family protein.","AT2G37410","TIM17-2",762.21,0.63911,0.12913,4.9494,{"v":7.45e-07,"d":"7.45E-07"},{"v":5.03e-06,"d":"5.03E-06"},"full_name=translocase inner membrane subunit 17-2. translocase inner membrane subunit 17-2. Mitochondrial inner membrane translocase. Together with AtTIM17-1, TIM17-2 has a long C-terminal extension not present in other TIMs. The extension is located in the outer membrane and so TIM17-2 links the inner and outer mitochondrial membranes. The C-terminal region is essential for protein import into mitochondria via the general import pathway but is not necessary for import via the carrier pathway.","AT2G01430","HB17",23.979,-6.3304,1.127,-5.6172,{"v":1.94e-08,"d":"1.94E-08"},{"v":1.27e-07,"d":"1.27E-07"},"full_name=homeobox-leucine zipper protein 17. homeobox-leucine zipper protein 17.","AT4G22780","ACR7",50.007,-1.3098,0.30271,-4.327,{"v":1.51e-05,"d":"1.51E-05"},{"v":9.62e-05,"d":"9.62E-05"},"full_name=ACT domain repeat 7. ACT domain repeat 7. Member of a family of ACT domain containing proteins . ACT domains are involved in amino acid binding ."]
["AT3G53280","CYP71B5",157.65,-0.68387,0.17574,-3.8915,{"v":9.96e-05,"d":"9.96E-05"},{"v":0.000716,"d":"7.16E-04"},"full_name=cytochrome p450 71b5. cytochrome p450 71b5. cytochrome P450 monooxygenase","AT4G32520","SHM3",199.89,0.65809,0.15689,4.1946,{"v":2.73E-5,"d":"2.73E-05"},{"v":0.00019,"d":"1.90E-04"},"full_name=serine hydroxymethyltransferase 3. serine hydroxymethyltransferase 3. Encodes a serine hydroxymethyltransferase SHMT3 located in the plastid.","AT4G18060","SH3P3",35.855,-2.0794,0.42055,-4.9445,{"v":7.63e-07,"d":"7.63E-07"},{"v":5.15e-06,"d":"5.15E-06"},"SH3 domain-containing protein.","AT4G15910","DI21",81.197,1.3922,0.24821,5.6089,{"v":2.04e-08,"d":"2.04E-08"},{"v":1.33e-07,"d":"1.33E-07"},"full_name=drought-induced 21. drought-induced 21. encodes a gene whose transcript level in root and leaves increases to progressive drought stress. The transcript level is also affected by changes of endogenous or exogenous abscisic acid level. It appears to be a member of plant-specific gene family that includes late embryo-abundant and zinc- IAA-induced proteins in other plants.","AT2G46270","GBF3",763.88,-0.40997,0.094813,-4.3239,{"v":1.53e-05,"d":"1.53E-05"},{"v":9.74e-05,"d":"9.74E-05"},"full_name=G-box binding factor 3. G-box binding factor 3. encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3%C2%A1%C2%AFs DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2."]
["AT3G51480","GLR3.6",254.19,-0.64582,0.16622,-3.8853,{"v":1.02E-4,"d":"1.02E-04"},{"v":0.000732,"d":"7.32E-04"},"full_name=glutamate receptor 3.6. glutamate receptor 3.6. member of Putative ligand-gated ion channel subunit family","AT5G17190",null,1260.6,0.45878,0.10953,4.1884,{"v":2.81e-05,"d":"2.81E-05"},{"v":1.95E-4,"d":"1.95E-04"},"B-cell receptor-associated-like protein.","AT1G53645",null,156,0.91396,0.18517,4.9357,{"v":7.99e-07,"d":"7.99E-07"},{"v":5.37e-06,"d":"5.37E-06"},"hydroxyproline-rich glycoprotein family protein.","AT5G60570",null,83.622,-1.2949,0.23128,-5.5987,{"v":2.16e-08,"d":"2.16E-08"},{"v":1.4e-07,"d":"1.40E-07"},"Galactose oxidase/kelch repeat superfamily protein.","AT1G35720","ANNAT1",213.43,-0.78732,0.18273,-4.3087,{"v":1.64e-05,"d":"1.64E-05"},{"v":0.000104,"d":"1.04E-04"},"full_name=annexin 1. annexin 1. Encodes a member of the annexin gene family, a diverse, multigene family of calcium-dependent, membrane-binding proteins. The protein was determined to have peroxidase activity. This activity is thought to be dependent on the presence of post-translational modifications (most likely phosphorylation). The protein was shown to be present as a mixture of monomer and homodimer. The homodimerization seems to be dependent on the presence of Ca2+ or H2O2. The dimerization was prevented by the addition of DTT, &#946;-mercaptoethanol and TCEP. Annat1 mRNA is expressed in flowers, roots,leaves and stems and is most abundant in stems. mRNA levels are increased in response to oxidative stress. Developmental expression patterns suggest a role in Golgi-mediated polysaccharide secretion. It is a Ca 2+-permeable transporter providing a molecular link between reactive oxygen species and cytosolic Ca 2+ in plants."]
["AT4G28706",null,158.38,-0.68303,0.17598,-3.8814,{"v":0.000104,"d":"1.04E-04"},{"v":0.000742,"d":"7.42E-04"},"pfkB-like carbohydrate kinase family protein.","AT1G63050","LPLAT2",340.42,-0.55857,0.13344,-4.1858,{"v":2.84e-05,"d":"2.84E-05"},{"v":0.000197,"d":"1.97E-04"},"full_name=lysophospholipid acyltransferase 2. MBOAT (membrane bound O-acyl transferase) family protein. Encodes a lysophosphatidylcholine acyltransferase (LPCAT). Participates in the Lands cycle in developing seeds. Involved in triacylglycerol biosynthesis.","AT4G27940","MTM1",59.619,1.4713,0.29855,4.9281,{"v":8.3e-07,"d":"8.30E-07"},{"v":5.57E-6,"d":"5.57E-06"},"full_name=manganese tracking factor for mitochondrial SOD2. manganese tracking factor for mitochondrial SOD2.","AT2G18590",null,12.655,-7.2666,1.3003,-5.5886,{"v":2.29E-8,"d":"2.29E-08"},{"v":1.49E-7,"d":"1.49E-07"},"Major facilitator superfamily protein.","AT4G12750",null,467.84,0.45952,0.10673,4.3054,{"v":1.67e-05,"d":"1.67E-05"},{"v":1.05E-4,"d":"1.05E-04"},"Homeodomain-like transcriptional regulator."]
["AT1G63300",null,1111.3,-0.48146,0.1242,-3.8764,{"v":1.06E-4,"d":"1.06E-04"},{"v":0.000756,"d":"7.56E-04"},"Myosin heavy chain-related protein.","AT1G69840","ATHIR1",381.16,0.5214,0.12474,4.1798,{"v":2.92e-05,"d":"2.92E-05"},{"v":2.02E-4,"d":"2.02E-04"},"SPFH/Band 7/PHB domain-containing membrane-associated protein family.","AT1G04550","IAA12",110,-1.0227,0.2077,-4.9241,{"v":8.48e-07,"d":"8.48E-07"},{"v":5.68e-06,"d":"5.68E-06"},"full_name=indole-3-acetic acid inducible 12. AUX/IAA transcriptional regulator family protein. IAA12/BDL plays a role in auxin-mediated processes of apical-basal patterning in the embryo. bdl mutants lack a primary root meristem","AT3G08720","S6K2",848.43,-1.194,0.21387,-5.5827,{"v":2.37E-8,"d":"2.37E-08"},{"v":1.53e-07,"d":"1.53E-07"},"full_name=serine/threonine protein kinase 2. serine/threonine protein kinase 2. Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.","AT1G80980",null,141.08,-0.90176,0.20975,-4.2991,{"v":1.71e-05,"d":"1.71E-05"},{"v":1.08E-4,"d":"1.08E-04"},"stress response NST1-like protein."]
["AT1G63260","TET10",113.13,0.82773,0.21375,3.8724,{"v":1.08E-4,"d":"1.08E-04"},{"v":0.000766,"d":"7.66E-04"},"full_name=tetraspanin10. tetraspanin10. Member of TETRASPANIN family","AT3G49810","ATPUB30",92.332,-0.96391,0.23091,-4.1744,{"v":2.99e-05,"d":"2.99E-05"},{"v":0.000206,"d":"2.06E-04"},"ARM repeat superfamily protein. Encodes a protein with E3 ubiquitin ligase activity that is involved in negative regulation of salt stress tolerance during germination.","AT5G53080","WTG1",87.546,1.1779,0.23944,4.9193,{"v":8.69e-07,"d":"8.69E-07"},{"v":5.8e-06,"d":"5.80E-06"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT1G77770",null,161.42,-0.94694,0.16983,-5.5759,{"v":2.46e-08,"d":"2.46E-08"},{"v":1.59e-07,"d":"1.59E-07"},"forkhead box protein, putative (DUF1644).","AT5G59080",null,6.7219,6.022,1.4022,4.2947,{"v":1.75e-05,"d":"1.75E-05"},{"v":1.1E-4,"d":"1.10E-04"},"hypothetical protein."]
["AT5G28020","CYSD2",62.965,-1.0179,0.26319,-3.8676,{"v":1.1E-4,"d":"1.10E-04"},{"v":0.00078,"d":"7.80E-04"},"full_name=cysteine synthase D2. cysteine synthase D2. Encodes cysteine synthase CysD2.","AT1G31420","FEI1",438.51,-0.50415,0.12095,-4.1681,{"v":3.07e-05,"d":"3.07E-05"},{"v":0.000211,"d":"2.11E-04"},"full_name=FEI 1. Leucine-rich repeat protein kinase family protein. Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots.","AT1G67600",null,168.68,0.88587,0.1802,4.9161,{"v":8.83e-07,"d":"8.83E-07"},{"v":5.89e-06,"d":"5.89E-06"},"Acid phosphatase/vanadium-dependent haloperoxidase-related protein.","AT2G43670",null,12.514,-7.2568,1.303,-5.5695,{"v":2.55E-8,"d":"2.55E-08"},{"v":1.65e-07,"d":"1.65E-07"},"Carbohydrate-binding X8 domain superfamily protein.","AT3G16560",null,29.749,1.8518,0.43152,4.2913,{"v":1.78e-05,"d":"1.78E-05"},{"v":1.12E-4,"d":"1.12E-04"},"Protein phosphatase 2C family protein."]
["AT5G37485",null,39.174,1.4376,0.37189,3.8657,{"v":1.11E-4,"d":"1.11E-04"},{"v":7.85E-4,"d":"7.85E-04"},"other_RNA. Unknown gene","AT2G36660","PAB7",56.541,-1.2024,0.28903,-4.16,{"v":3.18E-5,"d":"3.18E-05"},{"v":0.000219,"d":"2.19E-04"},"full_name=poly(A) binding protein 7. poly(A) binding protein 7. polyadenylate-binding protein, putative / PABP, putative. Member of the class III family of PABP proteins.","AT1G27470",null,207.71,0.76673,0.15611,4.9115,{"v":9.04e-07,"d":"9.04E-07"},{"v":6.02E-6,"d":"6.02E-06"},"transducin family protein / WD-40 repeat family protein.","AT3G53890","EVR1",162.43,-1.0913,0.19611,-5.5648,{"v":2.62E-8,"d":"2.62E-08"},{"v":1.69e-07,"d":"1.69E-07"},"Ribosomal protein S21e.","AT3G54470",null,221.79,0.65228,0.15204,4.2903,{"v":1.78e-05,"d":"1.78E-05"},{"v":1.12E-4,"d":"1.12E-04"},"uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS). encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis"]
["AT3G09190",null,218.99,-0.62681,0.16227,-3.8628,{"v":1.12E-4,"d":"1.12E-04"},{"v":7.94E-4,"d":"7.94E-04"},"Concanavalin A-like lectin family protein. Regulates flowering time in Ws ecotype.","AT1G33110",null,11.565,3.2563,0.78342,4.1566,{"v":3.23e-05,"d":"3.23E-05"},{"v":2.22E-4,"d":"2.22E-04"},"MATE efflux family protein.","AT3G23570",null,993.36,0.48401,0.098585,4.9096,{"v":9.13e-07,"d":"9.13E-07"},{"v":6.07e-06,"d":"6.07E-06"},"alpha/beta-Hydrolases superfamily protein.","AT5G06560","MYOB7",215.96,0.8578,0.1542,5.5629,{"v":2.65e-08,"d":"2.65E-08"},{"v":1.71e-07,"d":"1.71E-07"},"myosin-binding protein (Protein of unknown function, DUF593).","AT1G26100",null,10.431,5.6922,1.3273,4.2885,{"v":1.8E-5,"d":"1.80E-05"},{"v":1.13E-4,"d":"1.13E-04"},"Cytochrome b561/ferric reductase transmembrane protein family."]
["AT5G60335","ACP",4.5914,5.7019,1.4773,3.8596,{"v":0.000114,"d":"1.14E-04"},{"v":0.000802,"d":"8.02E-04"},"hydroxyacyl-thioester dehydratase type-like protein.","AT3G17740",null,187.53,0.68362,0.16465,4.1519,{"v":3.3e-05,"d":"3.30E-05"},{"v":0.000226,"d":"2.26E-04"},"hypothetical protein.","AT1G09210","CRT1b",317.6,-0.90965,0.18539,-4.9066,{"v":9.27e-07,"d":"9.27E-07"},{"v":6.15e-06,"d":"6.15E-06"},"full_name=calreticulin 1b. calreticulin 1b. Encodes one of three Arabidopsis calreticulins.","AT2G14170","ALDH6B2",438.89,0.85472,0.15373,5.5598,{"v":2.7E-8,"d":"2.70E-08"},{"v":1.73E-7,"d":"1.73E-07"},"full_name=aldehyde dehydrogenase 6B2. aldehyde dehydrogenase 6B2. Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase","AT3G16520","UGT88A1",38.465,1.685,0.39322,4.285,{"v":1.83e-05,"d":"1.83E-05"},{"v":0.000114,"d":"1.14E-04"},"full_name=UDP-glucosyl transferase 88A1. UDP-glucosyl transferase 88A1."]
["AT5G22810",null,1067.9,0.52666,0.13662,3.8549,{"v":1.16E-4,"d":"1.16E-04"},{"v":0.000817,"d":"8.17E-04"},"GDSL-like lipase/acylhydrolase superfamily protein.","AT5G64230",null,233.72,0.63594,0.15342,4.145,{"v":3.4E-5,"d":"3.40E-05"},{"v":2.32E-4,"d":"2.32E-04"},"1,8-cineole synthase.","AT2G18370",null,209.99,-2.6304,0.5366,-4.9021,{"v":9.48e-07,"d":"9.48E-07"},{"v":6.28E-6,"d":"6.28E-06"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.","AT2G34900","IMB1",257.41,0.95235,0.17153,5.5521,{"v":2.82e-08,"d":"2.82E-08"},{"v":1.81e-07,"d":"1.81E-07"},"full_name=IMBIBITION-INDUCIBLE 1. Transcription factor GTE6. Encodes a member of the BET subgroup of bromodomain proteins, a novel class of putative transcription factors. Its expression is induced during seed imbibition and downregulated during germination. Seeds of a loss-of-function mutant allele, imb1, show impaired cotyledon greening during germination in abscisic acid (ABA) and express higher levels of ABI5 protein than the wild type. Moreover, imb1 seeds are deficient in the phytochrome A (phyA)-mediated very-low-fluence response of germination.","AT2G19450","TAG1",1700.3,0.40791,0.0953,4.2803,{"v":1.87e-05,"d":"1.87E-05"},{"v":1.16E-4,"d":"1.16E-04"},"full_name=TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1. membrane bound O-acyl transferase (MBOAT) family protein. Encodes Acyl-CoA:diacylglycerol acyltransferase (DGAT) catalyzes the final step of the triacylglycerol synthesis pathway. An insertion mutation in the TAG1 gene results in altered lipid phenotype. Role in senescence and seed development. Its preferred substrate is linolenoyl-CoA (C18:3-CoA)."]
["AT2G22170","PLAT2",372.78,0.55593,0.14437,3.8508,{"v":1.18E-4,"d":"1.18E-04"},{"v":0.000828,"d":"8.28E-04"},"full_name=PLAT domain protein 2. Lipase/lipooxygenase, PLAT/LH2 family protein.","AT5G52882",null,1454.6,0.46724,0.11284,4.1406,{"v":3.46e-05,"d":"3.46E-05"},{"v":0.000236,"d":"2.36E-04"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT4G00740","QUA3",280.87,-0.70863,0.14464,-4.8992,{"v":9.62e-07,"d":"9.62E-07"},{"v":6.36e-06,"d":"6.36E-06"},"full_name=QUASIMODO 3. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. Encodes a Golgi-localized type II membrane pectin methyltransferase regulating cell wall biosynthesis in suspension cells.","AT3G24530",null,70.144,-1.4844,0.26765,-5.5461,{"v":2.92E-8,"d":"2.92E-08"},{"v":1.87e-07,"d":"1.87E-07"},"AAA-type ATPase family protein / ankyrin repeat family protein.","AT2G32920","PDIL2-3",167.52,-0.75892,0.17742,-4.2775,{"v":1.89e-05,"d":"1.89E-05"},{"v":1.18E-4,"d":"1.18E-04"},"full_name=PDI-like 2-3. PDI-like 2-3. Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response."]
["AT5G07820",null,38.79,-1.2876,0.33452,-3.8491,{"v":0.000119,"d":"1.19E-04"},{"v":0.000833,"d":"8.33E-04"},"Plant calmodulin-binding protein-like protein.","AT1G03770","RING1B",260.39,0.59753,0.14444,4.1369,{"v":3.52e-05,"d":"3.52E-05"},{"v":0.00024,"d":"2.40E-04"},"full_name=RING 1B. RING 1B. Encodes a nuclear localized protein with similarity to animal polycomb repressive core complex1 (PRC1) core component RING.Appears to function redundantly with ATRING1a, a close paralog. Both interact physically with CLF and LHP1 and appear to function together to repress class I KNOX gene expression.","AT1G61520","LHCA3",16.531,-3.1387,0.64152,-4.8926,{"v":9.95E-7,"d":"9.95E-07"},{"v":6.56e-06,"d":"6.56E-06"},"full_name=photosystem I light harvesting complex gene 3. PSI type III chlorophyll a/b-binding protein. PSI type III chlorophyll a/b-binding protein (Lhca3*1)","AT3G01650","RGLG1",728.13,-0.51951,0.093772,-5.5402,{"v":3.02e-08,"d":"3.02E-08"},{"v":1.93e-07,"d":"1.93E-07"},"full_name=RING domain ligase1. RING domain ligase1. Encodes RGLG1 (RING domain ligase 1), a RING domain ubiquitin E3 ligase that negatively regulates the drought stress response by mediating ERF53 transcriptional activity.","AT1G67070","DIN9",24.365,-1.9774,0.46246,-4.2758,{"v":1.9e-05,"d":"1.90E-05"},{"v":1.18E-4,"d":"1.18E-04"},"full_name=DARK INDUCIBLE 9. Mannose-6-phosphate isomerase, type I. Encodes a protein with phosphomannose isomerase activity that is involved in synthesis of ascorbic acid. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell."]
["AT5G21020",null,1646.4,0.65859,0.1716,3.8379,{"v":0.000124,"d":"1.24E-04"},{"v":0.000869,"d":"8.69E-04"},"transmembrane protein.","AT5G16290","VAT1",83.921,-0.9729,0.23568,-4.128,{"v":3.66e-05,"d":"3.66E-05"},{"v":0.000248,"d":"2.48E-04"},"full_name=VALINE-TOLERANT 1. VALINE-TOLERANT 1. Encodes a regulatory subunit of acetohydroxy acid synthase (AHAS), the &#64257;rst committed enzyme in the branched chain amino acid biosynthesis pathway.","AT4G36810","GGPS1",57.933,-1.4859,0.30398,-4.888,{"v":1.02E-6,"d":"1.02E-06"},{"v":6.7e-06,"d":"6.70E-06"},"full_name=geranylgeranyl pyrophosphate synthase 1. geranylgeranyl pyrophosphate synthase 1. Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots.","AT5G41370","XPB1",517.97,0.68602,0.12402,5.5316,{"v":3.17e-08,"d":"3.17E-08"},{"v":2.02e-07,"d":"2.02E-07"},"full_name=homolog of xeroderma pigmentosum complementation group B 1. DNA repair helicase XPB1-like protein. Encodes XPB1, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies.","AT3G52770","ZPR3",61.818,1.3146,0.30815,4.2662,{"v":1.99e-05,"d":"1.99E-05"},{"v":0.000123,"d":"1.23E-04"},"full_name=LITTLE ZIPPER 3. binding protein. ZPR3 is a small-leucine zipper containing protein that is involved in the establishment of leaf polarity."]
["AT3G01710",null,6.9651,-5.1906,1.3534,-3.8352,{"v":1.25E-4,"d":"1.25E-04"},{"v":0.000877,"d":"8.77E-04"},"TPX2 (targeting protein for Xklp2) protein family.","AT4G40065",null,93.077,1.0815,0.26233,4.1226,{"v":3.75e-05,"d":"3.75E-05"},{"v":0.000254,"d":"2.54E-04"},"other_RNA.","AT5G58540",null,118.41,1.0838,0.22192,4.8837,{"v":1.04E-6,"d":"1.04E-06"},{"v":6.84e-06,"d":"6.84E-06"},"Protein kinase superfamily protein.","AT5G13390","NEF1",777.15,-0.61003,0.1104,-5.5258,{"v":3.28e-08,"d":"3.28E-08"},{"v":2.08e-07,"d":"2.08E-07"},"full_name=NO EXINE FORMATION 1. no exine formation 1. Required for normal pollen development and lipid accumulation within the tapetum","AT5G02310","PRT6",749.52,0.39195,0.092021,4.2594,{"v":2.05E-5,"d":"2.05E-05"},{"v":1.27E-4,"d":"1.27E-04"},"full_name=proteolysis 6. proteolysis 6. Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination."]
["AT5G05870","UGT76C1",211.95,0.59584,0.15557,3.8299,{"v":0.000128,"d":"1.28E-04"},{"v":0.000894,"d":"8.94E-04"},"full_name=UDP-glucosyl transferase 76C1. UDP-glucosyl transferase 76C1.","AT5G04560","DME",354.78,-0.52939,0.12848,-4.1204,{"v":3.78e-05,"d":"3.78E-05"},{"v":0.000256,"d":"2.56E-04"},"full_name=DEMETER. HhH-GPD base excision DNA repair family protein. Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.","AT4G28100",null,19.872,-3.3745,0.69185,-4.8776,{"v":1.07e-06,"d":"1.07E-06"},{"v":7.04e-06,"d":"7.04E-06"},"transmembrane protein.","AT1G07640","OBP2",16.363,-4.4043,0.79805,-5.5188,{"v":3.41e-08,"d":"3.41E-08"},{"v":2.16E-7,"d":"2.16E-07"},"Dof-type zinc finger DNA-binding family protein. A member of the DOF transcription factors. Prominently expressed in the phloem of leaves and other organs. Expression is induced by wounding, MeJA and insect feeding. Upregulates glucosinolate biosynthesis.","AT3G26100",null,302.82,-0.5819,0.13672,-4.2561,{"v":2.08e-05,"d":"2.08E-05"},{"v":0.000128,"d":"1.28E-04"},"Regulator of chromosome condensation (RCC1) family protein."]
["AT5G57910",null,340.54,0.69563,0.18196,3.8229,{"v":0.000132,"d":"1.32E-04"},{"v":0.000918,"d":"9.18E-04"},"ribosomal RNA small subunit methyltransferase G.","AT1G16920","RABA1b",52.304,-1.2804,0.31115,-4.1152,{"v":3.87e-05,"d":"3.87E-05"},{"v":2.61E-4,"d":"2.61E-04"},"full_name=RAB GTPase homolog A1B. RAB GTPase homolog A1B. small GTP-binding protein (Rab11)similar to YPT3/RAB11 proteins in yeast and mammals, respectively. YPT3/RAB11 is involved in intracellular protein trafficking.","AT3G21230","4CL5",99.76,-1.2114,0.24861,-4.8727,{"v":1.1e-06,"d":"1.10E-06"},{"v":7.2e-06,"d":"7.20E-06"},"full_name=4-coumarate:CoA ligase 5. 4-coumarate:CoA ligase 5. The gene encodes a 4-coumarate coenzyme A ligase being able to use sinapate as substrate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, 5-OH-ferulic acid, ferulic acid and sinapic acid. At4CL5 was unable to use cinnamic acid as substrate. Knockout of At4CL5 (4cl5) revealed no effect on syringyl lignin content indicating that the activity observed does probably not occur in vivo.","AT3G09560","PAH1",744.63,-0.89284,0.16192,-5.5141,{"v":3.51e-08,"d":"3.51E-08"},{"v":2.21e-07,"d":"2.21E-07"},"full_name=PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1. Lipin family protein. The PAH1 gene encodes a phosphatidate phosphohydrolase. Mutant analysis revealed its involvement in galactolipid synthesis pathway, and the membrane lipid remodeling. The pah1pah2 double-mutant showed enhanced Al-susceptibility under low-P conditions, but there was no significant differences in Al tolerance between pah1pah2 and wild type when they were grown in a solution containing 35 &#956;M Pi.","AT5G44180","RLT2",471.6,0.45142,0.10619,4.2508,{"v":2.13e-05,"d":"2.13E-05"},{"v":0.000131,"d":"1.31E-04"},"full_name=RINGLET 2. Homeodomain-like transcriptional regulator."]
["AT3G52370","FLA15",779.49,0.46584,0.1219,3.8215,{"v":0.000133,"d":"1.33E-04"},{"v":0.000922,"d":"9.22E-04"},"full_name=FASCICLIN-like arabinogalactan protein 15 precursor. FASCICLIN-like arabinogalactan protein 15 precursor.","AT1G64090","RTNLB3",239.24,-0.62445,0.15192,-4.1103,{"v":3.95e-05,"d":"3.95E-05"},{"v":0.000266,"d":"2.66E-04"},"full_name=Reticulan like protein B3. Reticulan like protein B3.","AT5G55920","OLI2",236.88,0.84516,0.17356,4.8695,{"v":1.12e-06,"d":"1.12E-06"},{"v":7.3e-06,"d":"7.30E-06"},"full_name=OLIGOCELLULA 2. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. Encodes a homolog of the S. cerevisiae Nop2 that is involved in ribosome biogenesis and plays a role on organ size control by promoting cell proliferation and preventing compensation in normal leaf development.","AT1G23050",null,197.07,0.94949,0.17237,5.5085,{"v":3.62E-8,"d":"3.62E-08"},{"v":2.28E-7,"d":"2.28E-07"},"hydroxyproline-rich glycoprotein family protein.","AT5G01180","PTR5",41.251,-1.6317,0.38416,-4.2474,{"v":2.16E-5,"d":"2.16E-05"},{"v":0.000133,"d":"1.33E-04"},"full_name=peptide transporter 5. peptide transporter 5. Encodes a dipeptide transporter expressed in pollen and ovules during early seed development. GFP-tagged PTR5 localizes to the plasma membrane."]
["AT3G23700","SRRP1",73.54,-1.0336,0.27081,-3.8168,{"v":1.35E-4,"d":"1.35E-04"},{"v":0.000937,"d":"9.37E-04"},"Nucleic acid-binding proteins superfamily.","AT5G22740","CSLA02",474.12,-0.70455,0.17161,-4.1056,{"v":4.03e-05,"d":"4.03E-05"},{"v":0.000271,"d":"2.71E-04"},"full_name=cellulose synthase-like A02. cellulose synthase-like A02. encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein","AT3G04590","AHL14",285.54,0.72291,0.14864,4.8634,{"v":1.15E-6,"d":"1.15E-06"},{"v":7.51e-06,"d":"7.51E-06"},"AT hook motif DNA-binding family protein.","AT2G15570","ATHM3",45.793,-1.8423,0.33464,-5.5054,{"v":3.68e-08,"d":"3.68E-08"},{"v":2.32e-07,"d":"2.32E-07"},"Thioredoxin superfamily protein. chloroplast protein similar to prokaryotic thioredoxin.","AT3G43540",null,118.12,-0.89434,0.21072,-4.2441,{"v":2.19E-5,"d":"2.19E-05"},{"v":1.35E-4,"d":"1.35E-04"},"initiation factor 4F subunit (DUF1350)."]
["AT1G62370",null,48.892,1.1327,0.29719,3.8114,{"v":0.000138,"d":"1.38E-04"},{"v":0.000955,"d":"9.55E-04"},"RING/U-box superfamily protein.","AT5G12010",null,251.99,0.59017,0.14385,4.1027,{"v":4.08e-05,"d":"4.08E-05"},{"v":0.000273,"d":"2.73E-04"},"nuclease.","AT5G20150","SPX1",342.22,-0.98911,0.2036,-4.858,{"v":1.19E-6,"d":"1.19E-06"},{"v":7.7e-06,"d":"7.70E-06"},"full_name=SPX domain gene 1. SPX domain-containing protein 1. Expression is upregulated in the shoot of cax1/cax3 mutant. Additionally, its expression is responsive to both phosphate (Pi) and phosphite (Phi) in both roots and shoots.","AT3G59040","PPR287",147.38,0.97567,0.17751,5.4966,{"v":3.87e-08,"d":"3.87E-08"},{"v":2.43e-07,"d":"2.43E-07"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT4G04350","EMB2369",150.53,-0.74777,0.17647,-4.2375,{"v":2.26E-5,"d":"2.26E-05"},{"v":0.000138,"d":"1.38E-04"},"full_name=EMBRYO DEFECTIVE 2369. tRNA synthetase class I (I, L, M and V) family protein."]
["AT5G40770","PHB3",194.72,0.69082,0.18141,3.808,{"v":0.00014,"d":"1.40E-04"},{"v":0.000967,"d":"9.67E-04"},"full_name=prohibitin 3. prohibitin 3. prohibitin 3","AT5G56090","COX15",74.926,1.067,0.26026,4.0999,{"v":4.13e-05,"d":"4.13E-05"},{"v":0.000276,"d":"2.76E-04"},"full_name=cytochrome c oxidase 15. cytochrome c oxidase 15. Encodes a homolog of COX15. Microarray analysis show a 3.2 fold increase in transcription after treatment with rotenone, an electron transport chain inhibitor.","AT1G51510","Y14",374.93,0.63846,0.13154,4.8538,{"v":1.21e-06,"d":"1.21E-06"},{"v":7.85e-06,"d":"7.85E-06"},"RNA-binding (RRM/RBD/RNP motifs) family protein. This gene is predicted to encode a protein involved in the exon junction complex. Though there is a predicted RNA binding motif, in the Drosophila ortholog (33% identity), this motif mediates interactions with Mago and is not available for RNA binding. The Arabidopsis Y14 protein appears to be predominantly nucleolar, but there is also some evidence for its presence in the cytoplasm.","AT3G13277",null,197.06,0.87182,0.15873,5.4926,{"v":3.96e-08,"d":"3.96E-08"},{"v":2.48E-7,"d":"2.48E-07"},"other_RNA.","AT3G47360","HSD3",107.7,0.9703,0.22929,4.2318,{"v":2.32e-05,"d":"2.32E-05"},{"v":0.000142,"d":"1.42E-04"},"full_name=hydroxysteroid dehydrogenase 3. hydroxysteroid dehydrogenase 3. Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5."]
["AT5G01210",null,84.089,1.1015,0.28929,3.8076,{"v":0.00014,"d":"1.40E-04"},{"v":9.68E-4,"d":"9.68E-04"},"HXXXD-type acyl-transferase family protein.","AT2G13290",null,325.53,0.55057,0.13429,4.0997,{"v":4.14e-05,"d":"4.14E-05"},{"v":0.000276,"d":"2.76E-04"},"beta-1,4-N-acetylglucosaminyltransferase family protein.","AT5G08160","PK3",142.13,-0.94151,0.19398,-4.8537,{"v":1.21e-06,"d":"1.21E-06"},{"v":7.85e-06,"d":"7.85E-06"},"full_name=serine/threonine protein kinase 3. serine/threonine protein kinase 3. Encodes a serine/threonine protein kinase.","AT2G28760","UXS6",12.396,-7.238,1.3178,-5.4925,{"v":3.96e-08,"d":"3.96E-08"},{"v":2.48E-7,"d":"2.48E-07"},"full_name=UDP-XYL synthase 6. UDP-XYL synthase 6.","AT5G16130",null,839.84,0.50642,0.11968,4.2315,{"v":2.32e-05,"d":"2.32E-05"},{"v":0.000142,"d":"1.42E-04"},"Ribosomal protein S7e family protein."]
["AT4G32060","MICU",568.32,-0.49934,0.13128,-3.8037,{"v":0.000143,"d":"1.43E-04"},{"v":0.000982,"d":"9.82E-04"},"calcium-binding EF hand family protein.","AT5G15090","VDAC3",1074.1,0.42397,0.10352,4.0956,{"v":4.21E-5,"d":"4.21E-05"},{"v":2.81E-4,"d":"2.81E-04"},"full_name=voltage dependent anion channel 3. voltage dependent anion channel 3. Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. Purified VDAC3 is shown to have voltage-dependent anion channel activity.","AT4G39170",null,249.34,-0.76672,0.15811,-4.8493,{"v":1.24E-6,"d":"1.24E-06"},{"v":8.01e-06,"d":"8.01E-06"},"Sec14p-like phosphatidylinositol transfer family protein.","AT1G20330","SMT2",184.74,-1.0757,0.19601,-5.488,{"v":4.07E-8,"d":"4.07E-08"},{"v":2.54e-07,"d":"2.54E-07"},"full_name=sterol methyltransferase 2. sterol methyltransferase 2. Encodes a sterol-C24-methyltransferases involved in sterol biosynthesis. Mutants display altered sterol composition, serrated petals and sepals and altered cotyledon vascular patterning as well as ectopic endoreduplication. This suggests that suppression of endoreduplication is important for petal morphogenesis and that normal sterol composition is required for this suppression.","AT1G37130","NIA2",19.737,2.5947,0.61385,4.2269,{"v":2.37E-5,"d":"2.37E-05"},{"v":1.44E-4,"d":"1.44E-04"},"full_name=nitrate reductase 2. nitrate reductase 2. Identified as a mutant resistant to chlorate. Encodes nitrate reductase structural gene. Involved in nitrate assimilation. Has nitrate reductase activity. Up-regulated by the fungus P. indica. Binds transcription factor At2g35940."]
["AT2G39960",null,320.68,-0.54445,0.14331,-3.799,{"v":1.45E-4,"d":"1.45E-04"},{"v":0.000998,"d":"9.98E-04"},"Microsomal signal peptidase 25 kDa subunit (SPC25).","AT2G23800","GGPS2",61.718,1.1423,0.27915,4.0922,{"v":4.27e-05,"d":"4.27E-05"},{"v":0.000284,"d":"2.84E-04"},"full_name=geranylgeranyl pyrophosphate synthase 2. geranylgeranyl pyrophosphate synthase 2. encodes an endoplasmic reticulum-targeted geranylgeranyl pyrophosphate synthase","AT5G62670","HA11",335.38,-0.72985,0.15058,-4.8471,{"v":1.25e-06,"d":"1.25E-06"},{"v":8.09e-06,"d":"8.09E-06"},"full_name=H(+)-ATPase 11. H[+]-ATPase 11.","AT5G64260","EXL2",4047.8,-0.5209,0.09506,-5.4797,{"v":4.26e-08,"d":"4.26E-08"},{"v":2.66e-07,"d":"2.66E-07"},"full_name=EXORDIUM like 2. EXORDIUM like 2.","AT5G64730",null,188.14,0.68768,0.1629,4.2216,{"v":2.43e-05,"d":"2.43E-05"},{"v":1.47E-4,"d":"1.47E-04"},"Transducin/WD40 repeat-like superfamily protein."]
["AT3G09010",null,24.353,1.6382,0.4317,3.7947,{"v":0.000148,"d":"1.48E-04"},0.0010135,"Protein kinase superfamily protein.","AT1G34370","STOP1",330.35,0.84929,0.20769,4.0893,{"v":4.33e-05,"d":"4.33E-05"},{"v":0.000287,"d":"2.87E-04"},"full_name=sensitive to proton rhizotoxicity 1. C2H2 and C2HC zinc fingers superfamily protein. Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity. Cell wall of the mutant is unstable in low pH medium (pH 4.5) in low Ca solution. This would mediate Ca-alleviation of low pH stress through pectin-Ca interaction.","AT5G63760","ARI15",168.82,-0.93491,0.1932,-4.839,{"v":1.3E-6,"d":"1.30E-06"},{"v":8.4e-06,"d":"8.40E-06"},"full_name=ARIADNE 15. RING/U-box superfamily protein.","AT1G24440",null,103.91,-1.1467,0.20946,-5.4747,{"v":4.38e-08,"d":"4.38E-08"},{"v":2.73e-07,"d":"2.73E-07"},"RING/U-box superfamily protein.","AT1G14360","UTR3",35.728,-1.5418,0.36572,-4.2158,{"v":2.49e-05,"d":"2.49E-05"},{"v":0.000151,"d":"1.51E-04"},"full_name=UDP-galactose transporter 3. UDP-galactose transporter 3."]
["AT2G26355",null,455.32,0.63233,0.16672,3.7928,{"v":0.000149,"d":"1.49E-04"},1.0195E-3,"Natural antisense transcript overlaps with AT2G26360. Potential natural antisense gene, locus overlaps with AT2G26360","AT5G09660","PMDH2",9.8738,-4.1348,1.0122,-4.0851,{"v":4.41e-05,"d":"4.41E-05"},{"v":2.92E-4,"d":"2.92E-04"},"full_name=peroxisomal NAD-malate dehydrogenase 2. peroxisomal NAD-malate dehydrogenase 2. encodes a microbody NAD-dependent malate dehydrogenase encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.","AT1G74470",null,49.554,-1.6224,0.3356,-4.8342,{"v":1.34e-06,"d":"1.34E-06"},{"v":8.59e-06,"d":"8.59E-06"},"Pyridine nucleotide-disulfide oxidoreductase family protein. Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate.","AT3G13810","IDD11",390.19,-0.68047,0.12459,-5.4618,{"v":4.71e-08,"d":"4.71E-08"},{"v":2.93e-07,"d":"2.93E-07"},"full_name=indeterminate(ID)-domain 11. indeterminate(ID)-domain 11.","AT5G12470","RER4",659.42,0.41938,0.099589,4.2111,{"v":2.54e-05,"d":"2.54E-05"},{"v":1.54E-4,"d":"1.54E-04"},"UvrABC system C protein, putative (DUF3411)."]
["AT3G07350",null,15.046,-2.2658,0.59805,-3.7886,{"v":0.000151,"d":"1.51E-04"},0.0010343,"sulfate/thiosulfate import ATP-binding protein, putative (DUF506).","AT2G03730","ACR5",285.68,0.56641,0.13877,4.0815,{"v":4.47e-05,"d":"4.47E-05"},{"v":0.000296,"d":"2.96E-04"},"full_name=ACT domain repeat 5. ACT domain repeat 5. Member of a small family of ACT domain containing proteins. ACT domains are thought to be involved in amino acid binding.","AT2G21250",null,36.439,-1.7339,0.35899,-4.8299,{"v":1.37E-6,"d":"1.37E-06"},{"v":8.76e-06,"d":"8.76E-06"},"NAD(P)-linked oxidoreductase superfamily protein.","AT5G09930","ABCF2",12.004,-7.1997,1.3201,-5.4539,{"v":4.93e-08,"d":"4.93E-08"},{"v":3.05e-07,"d":"3.05E-07"},"full_name=ATP-binding cassette F2. ABC transporter family protein. member of GCN subfamily","AT5G15490","UGD3",124.6,0.83302,0.19815,4.2039,{"v":2.62E-5,"d":"2.62E-05"},{"v":0.000159,"d":"1.59E-04"},"full_name=UDP-glucose dehydrogenase 3. UDP-glucose 6-dehydrogenase family protein. Encodes one of four UDP-glucose dehydrogenase UGD) genes. Mutation of this gene in combination with UGD2 leads to swollen plant cell walls and severe developmental defects associated with changes in pectic polysaccharides."]
["AT3G59900","ARGOS",168.52,0.78509,0.20756,3.7825,{"v":1.55E-4,"d":"1.55E-04"},1.0577E-3,"full_name=AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE. auxin-regulated gene involved in organ size. Encodes ARGOS (Auxin-Regulated Gene Involved in Organ Size). Inducible by auxin. Involved in lateral organ size control. Transgenic plants expressing sense or antisense ARGOS cDNA display enlarged or reduced aerial organs, respectively. The alteration in organ size is attributable mainly to changes in cell number and the duration of organ growth.","AT1G62740","Hop2",438.08,0.63232,0.15516,4.0754,{"v":4.59e-05,"d":"4.59E-05"},{"v":0.000303,"d":"3.03E-04"},"full_name=Hop2. stress-inducible protein. Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","AT5G07370","IPK2a",220.45,0.83129,0.17229,4.8249,{"v":1.4e-06,"d":"1.40E-06"},{"v":8.96e-06,"d":"8.96E-06"},"full_name=inositol polyphosphate kinase 2 alpha. inositol polyphosphate kinase 2 alpha. Encodes inositol polyphosphate kinase, which phosphorylates inositol 1,4,5-triphosphate and inositol 1,3,4,5-tetrakisphosphate to generate inositol 1,3,4,5,6-pentakisphosphate","AT1G67365",null,204.44,0.83873,0.1539,5.4499,{"v":5.04e-08,"d":"5.04E-08"},{"v":3.12e-07,"d":"3.12E-07"},"Natural antisense transcript overlaps with AT1G67370. Potential natural antisense gene, locus overlaps with AT1G67370 Natural antisense transcript overlaps with AT1G67370","AT5G26742","emb1138",1716.5,0.36918,0.087871,4.2014,{"v":2.65E-5,"d":"2.65E-05"},{"v":0.00016,"d":"1.60E-04"},"full_name=embryo defective 1138. DEAD box RNA helicase (RH3)."]
["AT3G05085",null,28.301,1.4971,0.39621,3.7787,{"v":0.000158,"d":"1.58E-04"},0.0010721,null,"AT3G07350",null,20.028,2.8822,0.70779,4.0722,{"v":4.66e-05,"d":"4.66E-05"},{"v":0.000307,"d":"3.07E-04"},"sulfate/thiosulfate import ATP-binding protein, putative (DUF506).","AT2G32810","BGAL9",264.89,-0.71546,0.1485,-4.8179,{"v":1.45e-06,"d":"1.45E-06"},{"v":9.26e-06,"d":"9.26E-06"},"full_name=beta galactosidase 9. beta galactosidase 9. putative beta-galactosidase","AT5G63700",null,128.79,-1.1712,0.21502,-5.4468,{"v":5.13e-08,"d":"5.13E-08"},{"v":3.16e-07,"d":"3.16E-07"},"zinc ion binding / DNA binding protein.","AT1G13020","EIF4B2",179.94,0.7095,0.1691,4.1957,{"v":2.72E-5,"d":"2.72E-05"},{"v":1.64E-4,"d":"1.64E-04"},"full_name=eukaryotic initiation factor 4B2. eukaryotic initiation factor 4B2. Encodes eIF4B2, eukaryotic initiation factor 4B2."]
["AT1G19440","KCS4",533.58,0.45279,0.11996,3.7744,{"v":0.00016,"d":"1.60E-04"},0.0010882,"full_name=3-ketoacyl-CoA synthase 4. 3-ketoacyl-CoA synthase 4. Encodes KCS4, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT1G13640",null,288.64,0.55273,0.13593,4.0663,{"v":4.78e-05,"d":"4.78E-05"},{"v":0.000314,"d":"3.14E-04"},"Phosphatidylinositol 3- and 4-kinase family protein.","AT3G43920","DCL3",67.046,-1.3814,0.2872,-4.8097,{"v":1.51e-06,"d":"1.51E-06"},{"v":9.63e-06,"d":"9.63E-06"},"full_name=dicer-like 3. dicer-like 3. Encodes a ribonuclease III family protein that is required for endogenous RDR2-dependent siRNA (but not miRNA) formation.","AT4G15210","BAM5",11.608,-7.1482,1.3132,-5.4432,{"v":5.23e-08,"d":"5.23E-08"},{"v":3.22E-7,"d":"3.22E-07"},"full_name=beta-amylase 5. beta-amylase 5. cytosolic beta-amylase expressed in rosette leaves and inducible by sugar. RAM1 mutants have reduced beta amylase in leaves and stems.","AT1G12270","Hop1",231.4,0.62296,0.14867,4.1902,{"v":2.79e-05,"d":"2.79E-05"},{"v":0.000167,"d":"1.67E-04"},"full_name=Hop1. stress-inducible protein. Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones."]
["AT5G01890","PXC2",202.04,-0.74946,0.19879,-3.7702,{"v":1.63E-4,"d":"1.63E-04"},1.1045E-3,"Leucine-rich receptor-like protein kinase family protein.","AT1G71200","CITF1",15.742,2.5239,0.62195,4.058,{"v":4.95e-05,"d":"4.95E-05"},{"v":0.000325,"d":"3.25E-04"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT4G13030",null,713.87,-0.58665,0.12203,-4.8073,{"v":1.53E-6,"d":"1.53E-06"},{"v":9.73E-6,"d":"9.73E-06"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT2G36460","FBA6",2736,0.4977,0.091514,5.4385,{"v":5.37e-08,"d":"5.37E-08"},{"v":3.3e-07,"d":"3.30E-07"},"full_name=fructose-bisphosphate aldolase 6. Aldolase superfamily protein.","AT2G23940",null,122.04,-0.86908,0.20753,-4.1878,{"v":2.82e-05,"d":"2.82E-05"},{"v":0.000169,"d":"1.69E-04"},"transmembrane protein (DUF788)."]
["AT1G15440","PWP2",115.62,0.79509,0.21113,3.766,{"v":1.66E-4,"d":"1.66E-04"},1.1213E-3,"full_name=periodic tryptophan protein 2. periodic tryptophan protein 2. Encodes a nucleolar protein that is a ribosome biogenesis co-factor. Mutants display aberrant RNA processing and female gametophyte development.","AT5G18820","Cpn60alpha2",49.297,1.2231,0.30154,4.056,{"v":4.99E-5,"d":"4.99E-05"},{"v":0.000327,"d":"3.27E-04"},"full_name=chaperonin-60alpha2. TCP-1/cpn60 chaperonin family protein. Encodes a subunit of chloroplasts chaperonins that are involved in mediating the folding of newly synthesized, translocated, or stress-denatured proteins. Cpn60 subunits are: Cpn60alpha1 (At2g28000), AtCpn60alpha2 (At5g18820), AtCpn60beta1 (At1g55490), AtCpn60beta2 (At3g13470), AtCpn60beta3 (At5g56500), AtCpn60beta4 (At1g26230).","AT3G23050","IAA7",175.68,-1.1033,0.22961,-4.8052,{"v":1.55E-6,"d":"1.55E-06"},{"v":9.81e-06,"d":"9.81E-06"},"full_name=indole-3-acetic acid 7. indole-3-acetic acid 7. Transcription regulator acting as repressor of auxin-inducible gene expression. Plays role in the control of gravitropic growth and development in light-grown seedlings. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components. Pseudomonas syringae type III effector AvrRpt2 stimulates AXR2 protein turnover.","AT3G03640","BGLU25",235.18,-0.79672,0.14668,-5.4318,{"v":5.58e-08,"d":"5.58E-08"},{"v":3.42e-07,"d":"3.42E-07"},"full_name=beta glucosidase 25. beta glucosidase 25. Encodes beta-glucosidase (GLUC).","AT1G22200",null,527.09,0.42557,0.10179,4.1809,{"v":2.9E-5,"d":"2.90E-05"},{"v":1.74E-4,"d":"1.74E-04"},"Endoplasmic reticulum vesicle transporter protein."]
["AT2G16270",null,8.1786,-4.5188,1.2018,-3.76,{"v":0.00017,"d":"1.70E-04"},0.0011456,"transmembrane protein.","AT1G28440","HSL1",119.21,-0.85845,0.21211,-4.0471,{"v":5.19e-05,"d":"5.19E-05"},{"v":3.39E-4,"d":"3.39E-04"},"full_name=HAESA-like 1. HAESA-like 1.","AT1G29390","COR314-TM2",45.32,-1.6189,0.33776,-4.7931,{"v":1.64E-6,"d":"1.64E-06"},{"v":1.04E-5,"d":"1.04E-05"},"full_name=cold regulated 314 thylakoid membrane 2. cold regulated 314 thylakoid membrane 2. Integral membrane protein in the inner envelope of chloroplasts. Provide freezing tolerance.","AT3G22910","ACA13",56.041,-2.1086,0.38878,-5.4235,{"v":5.84E-8,"d":"5.84E-08"},{"v":3.58E-7,"d":"3.58E-07"},"ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein.","AT1G16770",null,1680.5,-0.37985,0.091189,-4.1655,{"v":3.11e-05,"d":"3.11E-05"},{"v":1.85E-4,"d":"1.85E-04"},"hypothetical protein."]
["AT5G41460",null,753.5,0.41268,0.10993,3.7539,{"v":1.74E-4,"d":"1.74E-04"},0.0011713,"transferring glycosyl group transferase (DUF604).","AT1G55730","CAX5",239.31,0.58361,0.14431,4.0442,{"v":5.25e-05,"d":"5.25E-05"},{"v":0.000342,"d":"3.42E-04"},"full_name=cation exchanger 5. cation exchanger 5. member of Low affinity calcium antiporter CAX2 family","AT2G37390","NAKR2",19.383,-3.1603,0.66023,-4.7867,{"v":1.7E-6,"d":"1.70E-06"},{"v":1.07e-05,"d":"1.07E-05"},"full_name=SODIUM POTASSIUM ROOT DEFECTIVE 2. Chloroplast-targeted copper chaperone protein.","AT5G55470","NHX3",872.02,0.56415,0.10408,5.4204,{"v":5.95e-08,"d":"5.95E-08"},{"v":3.63e-07,"d":"3.63E-07"},"full_name=Na+/H+ (sodium hydrogen) exchanger 3. Na+/H+ (sodium hydrogen) exchanger 3. member of Sodium proton exchanger family","AT1G78380","GSTU19",3887.2,-0.27557,0.066214,-4.1619,{"v":3.16e-05,"d":"3.16E-05"},{"v":0.000188,"d":"1.88E-04"},"full_name=glutathione S-transferase TAU 19. glutathione S-transferase TAU 19. Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim."]
["AT1G27660",null,55.249,-1.0599,0.28237,-3.7535,{"v":1.74E-4,"d":"1.74E-04"},0.0011728,"basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT1G71140","DTX14",24.498,1.7544,0.43384,4.0439,{"v":5.26e-05,"d":"5.26E-05"},{"v":0.000343,"d":"3.43E-04"},"MATE efflux family protein.","AT2G34460",null,432.28,-0.67537,0.14111,-4.786,{"v":1.7E-6,"d":"1.70E-06"},{"v":1.07e-05,"d":"1.07E-05"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT2G40330","PYL6",17.329,-4.8185,0.88985,-5.4149,{"v":6.13E-8,"d":"6.13E-08"},{"v":3.74e-07,"d":"3.74E-07"},"full_name=PYR1-like 6. PYR1-like 6. Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.","AT5G51940","NRPB6A",575.05,-0.45554,0.10949,-4.1606,{"v":3.17e-05,"d":"3.17E-05"},{"v":0.000189,"d":"1.89E-04"},"RNA polymerase Rpb6. One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At2g04630."]
["AT1G19190",null,70.247,-1.058,0.28209,-3.7506,{"v":1.76E-4,"d":"1.76E-04"},1.1841E-3,"alpha/beta-Hydrolases superfamily protein.","AT4G00430","PIP1;4",1506,-0.50391,0.12472,-4.0403,{"v":5.34e-05,"d":"5.34E-05"},{"v":0.000347,"d":"3.47E-04"},"full_name=plasma membrane intrinsic protein 1;4. plasma membrane intrinsic protein 1;4. a member of the plasma membrane intrinsic protein subfamily PIP1.","AT4G35950","RAC6",76.511,-1.2047,0.25206,-4.7796,{"v":1.76e-06,"d":"1.76E-06"},{"v":1.11E-5,"d":"1.11E-05"},"full_name=RAC-like 6. RAC-like 6. A member of ROP GTPases gene family-like. GTP binding protein Arac6.","AT3G26790","FUS3",473.76,-0.88978,0.16442,-5.4117,{"v":6.24e-08,"d":"6.24E-08"},{"v":3.8e-07,"d":"3.80E-07"},"full_name=FUSCA 3. AP2/B3-like transcriptional factor family protein. Transcriptional factor with high similarity to the B3 region of the VP1/ABI3-like proteins. Full length FUS3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of FUS3 requires the B3 DNA-binding domain and an activation domain. FUS3 specifies cotyledon identity. Regulator of gene expression during late embryogenesis. Involved in the control foliar organ identity in Arabidopsis by regulating the synthesis of two hormones, abscisic acid and gibberellin. FUS3 together with LEC1 positively regulate the abundance of the ABI3 protein in the seed.","AT1G05910","BRAT1",238.2,0.60733,0.14607,4.1577,{"v":3.21e-05,"d":"3.21E-05"},{"v":0.000191,"d":"1.91E-04"},"cell division cycle protein 48-related / CDC48-like protein."]
["AT1G67630","POLA2",60.694,-1.0492,0.27991,-3.7484,{"v":0.000178,"d":"1.78E-04"},1.1926E-3,"full_name=DNA polymerase alpha 2. DNA polymerase alpha 2.","AT1G68570","NPF3.1",5.4707,5.9426,1.4729,4.0347,{"v":5.47e-05,"d":"5.47E-05"},{"v":0.000355,"d":"3.55E-04"},"Major facilitator superfamily protein.","AT5G25080",null,223.49,0.72885,0.15262,4.7755,{"v":1.79E-6,"d":"1.79E-06"},{"v":1.13E-5,"d":"1.13E-05"},"Sas10/Utp3/C1D family.","AT5G66780",null,9070.4,0.49197,0.090976,5.4077,{"v":6.38e-08,"d":"6.38E-08"},{"v":3.88e-07,"d":"3.88E-07"},"late embryogenesis abundant protein.","AT2G43430","GLX2-1",179.88,0.68064,0.16383,4.1545,{"v":3.26E-5,"d":"3.26E-05"},{"v":1.93E-4,"d":"1.93E-04"},"full_name=glyoxalase 2-1. glyoxalase 2-1. Encodes a predicted mitochondrial glyoxalase GLX2-1. Studies using recombinant protein show that GLX2-1 contains a dinuclear metal binding site, but does not have glyoxalase 2 activity. Required for abiotic stress but not for normal plant growth."]
["AT3G19260","LOH2",139.44,0.71863,0.19183,3.7462,{"v":0.00018,"d":"1.80E-04"},1.2002E-3,"full_name=LAG1 homologue 2. LAG1 homologue 2. LAG1 homolog . Loss of function mutant is sensitive to AAL-toxin. LOH2 is presumed to function in sphingolipid metabolism. It encodes a ceramide synthase essential for production of LCFA-ceramides (mainly C26).","AT3G63310","BIL4",242.48,0.64047,0.15897,4.0288,{"v":5.61e-05,"d":"5.61E-05"},{"v":0.000363,"d":"3.63E-04"},"full_name=BRZ-INSENSITIVE-LONG HYPOCOTYLS 4. Bax inhibitor-1 family protein. Mediates cell elongation in brassinosteroid signaling.","AT4G31040","DLDG1",72.792,-1.284,0.26908,-4.7716,{"v":1.83e-06,"d":"1.83E-06"},{"v":1.15E-5,"d":"1.15E-05"},"CemA-like proton extrusion protein-like protein.","AT3G05050",null,101.77,-1.1759,0.21757,-5.4046,{"v":6.49e-08,"d":"6.49E-08"},{"v":3.94e-07,"d":"3.94E-07"},"Protein kinase superfamily protein.","AT4G31160","DCAF1",1316.6,0.3202,0.077206,4.1474,{"v":3.36e-05,"d":"3.36E-05"},{"v":0.000199,"d":"1.99E-04"},"full_name=DDB1-CUL4 associated factor 1. DDB1-CUL4 associated factor 1. Encodes a DCAF/DWD protein capable of interacting with DDB1 and associating with CUL4, likely as part of a nuclear ubiquitin ligase complex. DCAF1 appears to be required for plant embryogenesis and to affect several other developmental processes including leaf, shoot, and flower development."]
["AT3G11600","GIR2",84.056,-0.91997,0.24582,-3.7424,{"v":0.000182,"d":"1.82E-04"},1.2167E-3,"E3 ubiquitin-protein ligase.","AT1G60610",null,227.01,0.64485,0.16024,4.0243,{"v":5.71e-05,"d":"5.71E-05"},{"v":0.000369,"d":"3.69E-04"},"SBP (S-ribonuclease binding protein) family protein.","AT1G30880",null,377.31,0.64866,0.13604,4.768,{"v":1.86E-6,"d":"1.86E-06"},{"v":1.17E-5,"d":"1.17E-05"},"hypothetical protein.","AT2G44310",null,1222.5,0.63104,0.11691,5.3977,{"v":6.75e-08,"d":"6.75E-08"},{"v":4.09e-07,"d":"4.09E-07"},"Calcium-binding EF-hand family protein.","AT5G55160","SUMO2",518.46,0.46325,0.11174,4.1458,{"v":3.39e-05,"d":"3.39E-05"},{"v":0.0002,"d":"2.00E-04"},"full_name=small ubiquitin-like modifier 2. small ubiquitin-like modifier 2. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays."]
["AT4G04020","FIB",410.16,0.5097,0.13657,3.7323,{"v":0.00019,"d":"1.90E-04"},0.0012631,"full_name=fibrillin. fibrillin. Fibrillin precursor protein. The fibrillin preprotein, but not the mature protein interacts with ABI2. Regulated by abscisic acid response regulators. Involved in abscisic acid-mediated photoprotection.","AT1G62520",null,24.357,-1.7639,0.43905,-4.0176,{"v":5.88e-05,"d":"5.88E-05"},{"v":3.79E-4,"d":"3.79E-04"},"sulfated surface-like glycoprotein.","AT5G01620","TBL35",16.17,-3.1119,0.65441,-4.7552,{"v":1.98e-06,"d":"1.98E-06"},{"v":1.24E-5,"d":"1.24E-05"},"full_name=TRICHOME BIREFRINGENCE-LIKE 35. TRICHOME BIREFRINGENCE-LIKE 35. Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT3G10690","GYRA",768.51,0.52603,0.097572,5.3912,{"v":7e-08,"d":"7.00E-08"},{"v":4.23e-07,"d":"4.23E-07"},"full_name=DNA GYRASE A. DNA GYRASE A.","AT2G40290",null,243.01,0.58321,0.14084,4.141,{"v":3.46e-05,"d":"3.46E-05"},{"v":2.04E-4,"d":"2.04E-04"},"Eukaryotic translation initiation factor 2 subunit 1. Encodes an eIF2alpha homolog that can be phosphorylated by GCN2 in vitro."]
["AT5G53490","TL17",80.376,-0.88537,0.23751,-3.7277,{"v":1.93E-4,"d":"1.93E-04"},1.2837E-3,"Tetratricopeptide repeat (TPR)-like superfamily protein. thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein.","AT2G31902",null,117.23,-0.91414,0.22767,-4.0152,{"v":5.94E-5,"d":"5.94E-05"},{"v":0.000382,"d":"3.82E-04"},"Natural antisense transcript overlaps with AT2G31900. Potential natural antisense gene, locus overlaps with AT2G31900 Natural antisense transcript overlaps with AT2G31900","AT4G33000","CBL10",8.2329,-6.3184,1.3305,-4.7488,{"v":2.05e-06,"d":"2.05E-06"},{"v":1.28e-05,"d":"1.28E-05"},"full_name=calcineurin B-like protein 10. calcineurin B-like protein 10. Encodes a member of the calcineurin B-like calcium sensor gene family. Mediates salt tolerance by regulating ion homeostasis in Arabidopsis.","AT3G46290","HERK1",211.69,-0.82647,0.15349,-5.3844,{"v":7.27e-08,"d":"7.27E-08"},{"v":4.38e-07,"d":"4.38E-07"},"full_name=hercules receptor kinase 1. hercules receptor kinase 1. Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.","AT3G46510","PUB13",542.22,0.44591,0.10779,4.1367,{"v":3.52e-05,"d":"3.52E-05"},{"v":0.000207,"d":"2.07E-04"},"full_name=plant U-box 13. plant U-box 13. Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29. Involved in ubiquitination of pattern recognition receptor FLS2."]
["AT1G70300","KUP6",284.57,0.57766,0.15533,3.719,{"v":0.0002,"d":"2.00E-04"},1.3266E-3,"full_name=K+ uptake permease 6. K+ uptake permease 6. potassium transporter","AT3G58980",null,135.01,-0.76367,0.19035,-4.0119,{"v":6.02E-5,"d":"6.02E-05"},{"v":0.000387,"d":"3.87E-04"},"F-box family protein.","AT2G27310",null,70.015,1.3036,0.27503,4.7398,{"v":2.14e-06,"d":"2.14E-06"},{"v":1.33E-5,"d":"1.33E-05"},"F-box family protein.","AT3G24100","BIA",254.77,0.95612,0.17797,5.3723,{"v":7.77e-08,"d":"7.77E-08"},{"v":4.68e-07,"d":"4.68E-07"},"Uncharacterized protein family SERF.","AT2G27490","ATCOAE",196.83,0.68992,0.16704,4.1304,{"v":3.62e-05,"d":"3.62E-05"},{"v":2.12E-4,"d":"2.12E-04"},"dephospho-CoA kinase family. AT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA."]
["AT5G10570","AtVip2",4.2828,-5.4851,1.4761,-3.716,{"v":2.02E-4,"d":"2.02E-04"},0.0013393,"basic helix-loop-helix (bHLH) DNA-binding superfamily protein. Encodes a myo-inositol hexakisphosphate kinase.","AT3G50440","MES10",641.27,-0.70636,0.17628,-4.007,{"v":6.15e-05,"d":"6.15E-05"},{"v":0.000394,"d":"3.94E-04"},"full_name=methyl esterase 10. methylesterase. Encodes a protein shown to have methyl jasmonate esterase activity in vitro. This protein does not act on methyl IAA, MeSA, MeGA4, or MEGA9 in vitro.","AT3G13750","BGAL1",43.483,-1.5579,0.32895,-4.736,{"v":2.18e-06,"d":"2.18E-06"},{"v":1.35e-05,"d":"1.35E-05"},"full_name=beta galactosidase 1. beta galactosidase 1. beta-galactosidase, glycosyl hydrolase family 35","AT1G71865",null,177.57,-0.96191,0.17927,-5.3656,{"v":8.07e-08,"d":"8.07E-08"},{"v":4.85e-07,"d":"4.85E-07"},"PyrD.","AT3G61140","FUS6",370.51,0.49477,0.11987,4.1275,{"v":3.67e-05,"d":"3.67E-05"},{"v":0.000215,"d":"2.15E-04"},"full_name=FUSCA 6. COP9 signalosome complex subunit 1. Represses photomorphogenesis and induces skotomorphogenesis in the dark. Component of the nuclear-localized COP9 complex. Mutants display striking purple coloration due to anthocyanin accumulation in their cotyledons, first become defective during embryogenesis and exhibit limited seedling development."]
["AT1G47290","3BETAHSD/D1",113.05,-0.73687,0.19847,-3.7128,{"v":2.05E-4,"d":"2.05E-04"},0.0013539,"full_name=3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1. 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1. Encodes an enzyme with 3&#946;-hydroxysteroid dehydrogenase/C4-decarboxylase activity <i>in vitro</i>. The activity of the enzyme was determined using microsomal extracts of yeast overexpressing the <i>Arabidopsis</i> gene. Cytosolic fractions failed to be associated to the activity, leading to the speculation that the enzyme is membrane-bound.","AT3G03060","SBA1",26.215,1.7358,0.43409,3.9988,{"v":6.37e-05,"d":"6.37E-05"},{"v":0.000407,"d":"4.07E-04"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT3G05300",null,31.552,-1.8418,0.38921,-4.732,{"v":2.22e-06,"d":"2.22E-06"},{"v":1.38E-5,"d":"1.38E-05"},"Cytidine/deoxycytidylate deaminase family protein.","AT2G17560","HMGB4",147.56,-0.99238,0.1852,-5.3585,{"v":8.39e-08,"d":"8.39E-08"},{"v":5.03e-07,"d":"5.03E-07"},"full_name=high mobility group B4. high mobility group B4. Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha.","AT3G04240","SEC",960.81,0.35776,0.086848,4.1193,{"v":3.8e-05,"d":"3.80E-05"},{"v":2.22E-4,"d":"2.22E-04"},"full_name=secret agent. Tetratricopeptide repeat (TPR)-like superfamily protein. Has O-linked N-acetyl glucosamine transferase activity. Similar to Arabidopsis SPY gene."]
["AT1G04830",null,668.09,0.39034,0.10516,3.7119,{"v":0.000206,"d":"2.06E-04"},1.3563E-3,"Ypt/Rab-GAP domain of gyp1p superfamily protein.","AT1G47970",null,552.39,0.48296,0.12083,3.997,{"v":6.42e-05,"d":"6.42E-05"},{"v":0.00041,"d":"4.10E-04"},"nucleolin.","AT1G53860",null,8.4343,-6.3436,1.3433,-4.7223,{"v":2.33e-06,"d":"2.33E-06"},{"v":1.44e-05,"d":"1.44E-05"},"Remorin family protein.","AT1G03770","RING1B",720.96,0.58902,0.10998,5.3559,{"v":8.51e-08,"d":"8.51E-08"},{"v":5.1e-07,"d":"5.10E-07"},"full_name=RING 1B. RING 1B. Encodes a nuclear localized protein with similarity to animal polycomb repressive core complex1 (PRC1) core component RING.Appears to function redundantly with ATRING1a, a close paralog. Both interact physically with CLF and LHP1 and appear to function together to repress class I KNOX gene expression.","AT2G26570","WEB1",273.5,-0.63976,0.15545,-4.1156,{"v":3.86e-05,"d":"3.86E-05"},{"v":0.000225,"d":"2.25E-04"},"full_name=WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1. WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT-like protein (DUF827). Encodes a coiled-coil protein WEB1 (weak chloroplast movement under blue light 1). WEB1, together with another coiled-coil protein WEB2/PMI2 (At1g66840), maintains the chloroplast photorelocation movement velocity."]
["AT4G22860","TPXL3",30.948,-1.4598,0.39389,-3.7061,{"v":0.00021,"d":"2.10E-04"},1.3839E-3,"Cell cycle regulated microtubule associated protein.","AT5G14800","P5CR",248.89,0.60714,0.15226,3.9875,{"v":6.68e-05,"d":"6.68E-05"},{"v":0.000425,"d":"4.25E-04"},"full_name=pyrroline-5- carboxylate (P5C) reductase. pyrroline-5- carboxylate (P5C) reductase. Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.","AT1G22430",null,770.62,-0.51509,0.10926,-4.7142,{"v":2.43E-6,"d":"2.43E-06"},{"v":1.5E-5,"d":"1.50E-05"},"GroES-like zinc-binding dehydrogenase family protein.","AT3G15670","LEA76",99689,-0.65084,0.12182,-5.3427,{"v":9.16E-8,"d":"9.16E-08"},{"v":5.47e-07,"d":"5.47E-07"},"Late embryogenesis abundant protein (LEA) family protein.","AT1G75370",null,988.53,0.35153,0.085464,4.1132,{"v":3.9e-05,"d":"3.90E-05"},{"v":0.000227,"d":"2.27E-04"},"Sec14p-like phosphatidylinositol transfer family protein."]
["AT3G06170",null,770.2,0.38155,0.10306,3.7023,{"v":2.14E-4,"d":"2.14E-04"},1.4023E-3,"Serinc-domain containing serine and sphingolipid biosynthesis protein.","AT1G63470","AHL5",75.62,-1.0045,0.25209,-3.9847,{"v":6.76e-05,"d":"6.76E-05"},{"v":0.00043,"d":"4.30E-04"},"AT hook motif DNA-binding family protein.","AT1G64680",null,82.64,-1.199,0.2546,-4.7095,{"v":2.48E-6,"d":"2.48E-06"},{"v":1.53e-05,"d":"1.53E-05"},"beta-carotene isomerase D27.","AT4G37910","mtHsc70-1",514.98,-0.64264,0.12038,-5.3383,{"v":9.38e-08,"d":"9.38E-08"},{"v":5.59e-07,"d":"5.59E-07"},"full_name=mitochondrial heat shock protein 70-1. mitochondrial heat shock protein 70-1.","AT1G03590",null,112.92,0.86204,0.21011,4.1027,{"v":4.08e-05,"d":"4.08E-05"},{"v":0.000237,"d":"2.37E-04"},"Protein phosphatase 2C family protein."]
["AT3G15880","WSIP2",971.61,0.39446,0.10656,3.7016,{"v":2.14E-4,"d":"2.14E-04"},0.0014055,"full_name=WUS-interacting protein 2. WUS-interacting protein 2.","AT3G01720","ATSERGT1",546.69,-0.45765,0.11485,-3.9846,{"v":6.76e-05,"d":"6.76E-05"},{"v":0.00043,"d":"4.30E-04"},"peptidyl serine alpha-galactosyltransferase.","AT2G38400","AGT3",1753.7,-0.85785,0.18221,-4.7081,{"v":2.5e-06,"d":"2.50E-06"},{"v":1.54e-05,"d":"1.54E-05"},"full_name=alanine:glyoxylate aminotransferase 3. alanine:glyoxylate aminotransferase 3. alanine:glyoxylate aminotransferase 2 homolog (AGT3) mRNA,","AT5G12210","RGTB1",242.33,0.75772,0.14199,5.3365,{"v":9.48e-08,"d":"9.48E-08"},{"v":5.64e-07,"d":"5.64E-07"},"full_name=RAB geranylgeranyl transferase beta subunit 1. RAB geranylgeranyl transferase beta subunit 1.","AT2G27940","ATL57",303.01,-0.54398,0.13261,-4.1022,{"v":4.09e-05,"d":"4.09E-05"},{"v":0.000238,"d":"2.38E-04"},"RING/U-box superfamily protein."]
["AT4G32460","BDX",63.969,-1.0031,0.27113,-3.6998,{"v":0.000216,"d":"2.16E-04"},1.413E-3,"choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642).","AT2G42280","FBH4",55.731,1.1153,0.28028,3.9792,{"v":6.92e-05,"d":"6.92E-05"},{"v":0.000439,"d":"4.39E-04"},"full_name=FLOWERING BHLH 4. basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT3G28345","ABCB15",526,-0.61347,0.13041,-4.7042,{"v":2.55e-06,"d":"2.55E-06"},{"v":1.57e-05,"d":"1.57E-05"},"full_name=ATP-binding cassette B15. ABC transporter family protein. Encodes an ATP-binding cassette (ABC) transporter. Expressed in the vascular tissue of primary stem.","AT1G67120","MDN1",1018.6,0.58904,0.11045,5.333,{"v":9.66e-08,"d":"9.66E-08"},{"v":5.74e-07,"d":"5.74E-07"},"midasin-like protein. Represents a homolog of the yeast MDN gene, which encodes a non-ribosomal protein involved in the maturation and assembly of the 60S ribosomal subunit. In Arabidopsis, it is essential for female gametogenesis progression.","AT2G36490","DML1",1097.6,-0.40694,0.099342,-4.0964,{"v":4.2e-05,"d":"4.20E-05"},{"v":2.43E-4,"d":"2.43E-04"},"full_name=demeter-like 1. demeter-like 1. A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts."]
["AT4G03400","DFL2",134.23,0.70207,0.18989,3.6972,{"v":0.000218,"d":"2.18E-04"},1.4249E-3,"full_name=DWARF IN LIGHT 2. Auxin-responsive GH3 family protein. Encodes a GH3-related gene involved in red light-specific hypocotyl elongation. Analysis of sense and antisense transgenic plants suggests that DFL2 is located downstream of red light signal transduction and determines the degree of hypocotyl elongation.","AT2G46520","XPO2",252.49,0.57117,0.14364,3.9763,{"v":7e-05,"d":"7.00E-05"},{"v":0.000443,"d":"4.43E-04"},"cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter.","AT3G16320","CDC27a",58.641,1.3525,0.28774,4.7004,{"v":2.6e-06,"d":"2.60E-06"},{"v":1.59E-5,"d":"1.59E-05"},"Tetratricopeptide repeat (TPR)-like superfamily protein. Subunit in the anaphase-promoting complex. Role in gametogenesis, control of mitotic progression and cell differentiation during the entire life cycle.","AT1G21760","FBP7",318.29,0.70552,0.13239,5.3291,{"v":9.87e-08,"d":"9.87E-08"},{"v":5.86e-07,"d":"5.86E-07"},"full_name=F-box protein 7. F-box protein 7. This gene is predicted to encode an F-box protein that is evolutionarily conserved between Arabidopsis and other eukaryotes including S.cerevisiae and humans. It may play a role in regulating translation under conditions of temperature stress. FBP7 transcript levels are increased at high and low temperatures.","AT5G27860",null,304.33,-0.53297,0.13025,-4.092,{"v":4.28e-05,"d":"4.28E-05"},{"v":0.000247,"d":"2.47E-04"},"hypothetical protein."]
["AT4G27520","ENODL2",469.85,0.50718,0.13732,3.6934,{"v":0.000221,"d":"2.21E-04"},0.001443,"full_name=early nodulin-like protein 2. early nodulin-like protein 2.","AT3G10440","SGO1",44.751,-1.2297,0.30969,-3.9708,{"v":7.16e-05,"d":"7.16E-05"},{"v":0.000452,"d":"4.52E-04"},"Shugoshin C terminus.","AT5G13420","TRA2",1230.2,-0.50052,0.10657,-4.6967,{"v":2.64e-06,"d":"2.64E-06"},{"v":1.62e-05,"d":"1.62E-05"},"full_name=transaldolase 2. Aldolase-type TIM barrel family protein.","AT3G44550","FAR5",11.5,-7.1395,1.3416,-5.3216,{"v":1.03E-7,"d":"1.03E-07"},{"v":6.09e-07,"d":"6.09E-07"},"full_name=fatty acid reductase 5. fatty acid reductase 5. Encodes a member of the eight-member gene family encoding alcohol-forming fatty acyl-CoA reductases (FARs) identified in Arabidopsis thaliana. Three of the FARs, FAR1 (At5g22500), FAR4 (At3g44540) and FAR5 (At3g44550), are shown to generate the fatty alcohols found in root, seed coat, and wound-induced leaf tissue.","AT3G26770",null,1171.1,-0.33361,0.081641,-4.0863,{"v":4.38e-05,"d":"4.38E-05"},{"v":0.000253,"d":"2.53E-04"},"NAD(P)-binding Rossmann-fold superfamily protein."]
["AT1G72120","NPF5.14",32.507,1.3429,0.36423,3.6868,{"v":0.000227,"d":"2.27E-04"},0.0014779,"Major facilitator superfamily protein.","AT1G47580","DYW1",31.673,-1.5087,0.3805,-3.9652,{"v":7.33e-05,"d":"7.33E-05"},{"v":0.000462,"d":"4.62E-04"},"full_name=DYW domain protein 1. Pentatricopeptide repeat (PPR) superfamily protein.","AT3G28700",null,145.27,0.87588,0.18659,4.6942,{"v":2.68e-06,"d":"2.68E-06"},{"v":1.64e-05,"d":"1.64E-05"},"NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185).","AT5G65460","KAC2",175.36,-1.0452,0.19666,-5.3149,{"v":1.07e-07,"d":"1.07E-07"},{"v":6.31e-07,"d":"6.31E-07"},"full_name=kinesin like protein for actin based chloroplast movement 2. kinesin like protein for actin based chloroplast movement 2. Kinesin that binds cyclin-dependent kinase CDKA;1 as homodimer or as heterodimer with KCA1","AT5G50750","RGP4",22.303,-2.1988,0.53845,-4.0837,{"v":4.43e-05,"d":"4.43E-05"},{"v":0.000255,"d":"2.55E-04"},"full_name=reversibly glycosylated polypeptide 4. reversibly glycosylated polypeptide 4. RGP4 is a reversibly glycosylated polypeptide. Analyses using tagged RGP4 suggest that it is present in the cytosol and in association with the Golgi apparatus. Recombinant RGP4 does not have UDP-arabinose mutase activity based on an in vitro assay even though the related RGP1, RGP2, and RGP3 proteins do have activity in the same assay. RGP4 can form complexes with RGP1 and RGP2. RGP4 is expressed during seed development."]
["AT3G56290",null,119.86,0.74518,0.20228,3.6839,{"v":0.00023,"d":"2.30E-04"},0.0014921,"potassium transporter.","AT3G46030","HTB11",439.93,0.48969,0.12362,3.9614,{"v":7.45e-05,"d":"7.45E-05"},{"v":0.000469,"d":"4.69E-04"},"Histone superfamily protein.","AT5G60640","PDIL1-4",346.51,-0.83436,0.1779,-4.69,{"v":2.73e-06,"d":"2.73E-06"},{"v":1.67e-05,"d":"1.67E-05"},"full_name=PDI-like 1-4. PDI-like 1-4. Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.","AT1G50200","ALATS",895.27,0.48835,0.091984,5.3091,{"v":1.1e-07,"d":"1.10E-07"},{"v":6.5e-07,"d":"6.50E-07"},"full_name=Alanyl-tRNA synthetase. Alanyl-tRNA synthetase.","AT5G58690","PLC5",20.208,2.3377,0.57296,4.0801,{"v":4.5e-05,"d":"4.50E-05"},{"v":0.000259,"d":"2.59E-04"},"full_name=phosphatidylinositol-speciwc phospholipase C5. phosphatidylinositol-speciwc phospholipase C5."]
["AT5G17850","CCX2",157.02,0.66357,0.18032,3.68,{"v":2.33E-4,"d":"2.33E-04"},1.5119E-3,"Sodium/calcium exchanger family protein.","AT2G40370","LAC5",724.59,0.53817,0.13607,3.9552,{"v":7.65e-05,"d":"7.65E-05"},{"v":0.00048,"d":"4.80E-04"},"full_name=laccase 5. laccase 5. putative laccase, a member of laccase family of genes (17 members in Arabidopsis).","AT3G20770","EIN3",1582.6,0.50111,0.10698,4.6841,{"v":2.81e-06,"d":"2.81E-06"},{"v":1.71e-05,"d":"1.71E-05"},"full_name=ETHYLENE-INSENSITIVE3. Ethylene insensitive 3 family protein. Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses.","AT3G14680","CYP72A14",586.77,-0.56979,0.10738,-5.3065,{"v":1.12E-7,"d":"1.12E-07"},{"v":6.58e-07,"d":"6.58E-07"},"full_name=cytochrome P450, family 72, subfamily A, polypeptide 14. cytochrome P450, family 72, subfamily A, polypeptide 14. putative cytochrome P450","AT5G52300","LTI65",15360,-0.36733,0.090096,-4.0772,{"v":4.56e-05,"d":"4.56E-05"},{"v":0.000262,"d":"2.62E-04"},"full_name=LOW-TEMPERATURE-INDUCED 65. CAP160 protein. encodes a protein that is induced in expression in response to water deprivation such as cold, high-salt, and dessication. The response appears to be via abscisic acid. The promoter region contains two ABA-responsive elements (ABREs) that are required for the dehydration-responsive expression of rd29B as cis-acting elements. Protein is a member of a gene family with other members found plants, animals and fungi."]
["AT1G67600",null,85.081,0.82404,0.22413,3.6766,{"v":0.000236,"d":"2.36E-04"},1.5294E-3,"Acid phosphatase/vanadium-dependent haloperoxidase-related protein.","AT2G31270","CDT1A",4.785,-5.6508,1.4314,-3.9479,{"v":7.89e-05,"d":"7.89E-05"},{"v":0.000494,"d":"4.94E-04"},"full_name=homolog of yeast CDT1 A. CDT1-like protein A. Encodes a cyclin-dependent protein kinase. Involved in nuclear DNA replication and plastid division. Located in nucleus and chloroplast.","AT2G42320",null,29.165,-2.0069,0.42903,-4.6776,{"v":2.9e-06,"d":"2.90E-06"},{"v":1.76e-05,"d":"1.76E-05"},"nucleolar protein gar2-like protein.","AT1G72650","TRFL6",433.26,0.6271,0.11829,5.3014,{"v":1.15E-7,"d":"1.15E-07"},{"v":6.75E-7,"d":"6.75E-07"},"full_name=TRF-like 6. TRF-like 6. Arabidopsis thaliana myb family transcription factor (At1g72650)","AT3G08960","KA120",178.03,0.65892,0.16179,4.0727,{"v":4.65e-05,"d":"4.65E-05"},{"v":0.000266,"d":"2.66E-04"},"ARM repeat superfamily protein."]
["AT4G13850","GR-RBP2",307.15,0.58012,0.15789,3.6743,{"v":0.000238,"d":"2.38E-04"},0.0015399,"full_name=glycine-rich RNA-binding protein 2. glycine-rich RNA-binding protein 2. Encodes a glycine-rich RNA-binding protein. Gene expression is induced by cold.","AT3G19210","RAD54",17.502,2.0776,0.52659,3.9454,{"v":7.97e-05,"d":"7.97E-05"},{"v":0.000498,"d":"4.98E-04"},"full_name=homolog of RAD54. DNA repair/recombination protein. Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases. Functions in DNA repair via homologous recombination.","AT2G31980","CYS2",454.16,-0.96659,0.20685,-4.673,{"v":2.97e-06,"d":"2.97E-06"},{"v":1.8E-5,"d":"1.80E-05"},"full_name=PHYTOCYSTATIN 2. PHYTOCYSTATIN 2.","AT2G21130",null,139.06,0.98284,0.1856,5.2953,{"v":1.19e-07,"d":"1.19E-07"},{"v":6.96e-07,"d":"6.96E-07"},"Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein.","AT3G23150","ETR2",119.54,-0.79685,0.19597,-4.0662,{"v":4.78e-05,"d":"4.78E-05"},{"v":0.000273,"d":"2.73E-04"},"full_name=ethylene response 2. Signal transduction histidine kinase, hybrid-type, ethylene sensor. Involved in ethylene perception in Arabidopsis"]
["AT2G01990",null,8.0591,-3.8932,1.0613,-3.6684,{"v":0.000244,"d":"2.44E-04"},1.5726E-3,"XRI1-like protein.","AT5G35080","OS9",191.74,-0.66562,0.16885,-3.942,{"v":8.08e-05,"d":"8.08E-05"},{"v":5.04E-4,"d":"5.04E-04"},"full_name=OS9. ER lectin-like protein. Encodes a protein involved in the endoplasmic reticulum-associated degradation of glycoproteins.","AT5G58770","cPT4",100.5,-1.1606,0.24864,-4.6679,{"v":3.04e-06,"d":"3.04E-06"},{"v":1.84E-5,"d":"1.84E-05"},"full_name=cis-prenyltransferase 4. Undecaprenyl pyrophosphate synthetase family protein.","AT2G19860","HXK2",211.24,-0.85475,0.16162,-5.2887,{"v":1.23E-7,"d":"1.23E-07"},{"v":7.21e-07,"d":"7.21E-07"},"full_name=hexokinase 2. hexokinase 2. Encodes a protein with hexokinase activity (AtHXK2) and acts as a sensor for plant sugar responses.","AT3G10920","MSD1",639.96,-0.59112,0.1455,-4.0626,{"v":4.85E-5,"d":"4.85E-05"},{"v":0.000277,"d":"2.77E-04"},"full_name=manganese superoxide dismutase 1. manganese superoxide dismutase 1. manganese superoxide dismutase (MSD1)"]
["AT4G26770",null,18.226,1.9981,0.54545,3.6632,{"v":0.000249,"d":"2.49E-04"},0.0016024,"Phosphatidate cytidylyltransferase family protein.","AT5G23660","SWEET12",142.41,-0.79945,0.20305,-3.9371,{"v":8.25E-5,"d":"8.25E-05"},{"v":0.000514,"d":"5.14E-04"},"bidirectional sugar transporter SWEET12-like protein. Encodes a member of the SWEET sucrose efflux transporter family proteins.","AT5G44090",null,779.31,0.73856,0.15834,4.6645,{"v":3.09e-06,"d":"3.09E-06"},{"v":1.87e-05,"d":"1.87E-05"},"Calcium-binding EF-hand family protein.","AT5G11500",null,1191.2,0.43552,0.08241,5.2849,{"v":1.26e-07,"d":"1.26E-07"},{"v":7.35e-07,"d":"7.35E-07"},"coiled-coil protein.","AT2G33170",null,29.427,-1.6088,0.39611,-4.0615,{"v":4.87e-05,"d":"4.87E-05"},{"v":0.000277,"d":"2.77E-04"},"Leucine-rich repeat receptor-like protein kinase family protein."]
["AT1G22430",null,1328.5,0.39351,0.10759,3.6575,{"v":0.000255,"d":"2.55E-04"},0.0016349,"GroES-like zinc-binding dehydrogenase family protein.","AT3G07700","SIA1",839.35,0.53736,0.1367,3.931,{"v":8.46e-05,"d":"8.46E-05"},{"v":0.000526,"d":"5.26E-04"},"Protein kinase superfamily protein.","AT4G36020","CSDP1",181.64,0.80887,0.17357,4.6601,{"v":3.16e-06,"d":"3.16E-06"},{"v":1.91E-5,"d":"1.91E-05"},"full_name=cold shock domain protein 1. cold shock domain protein 1. Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature.","AT5G59430","TRP1",251.74,-0.74446,0.14098,-5.2807,{"v":1.29E-7,"d":"1.29E-07"},{"v":7.5e-07,"d":"7.50E-07"},"full_name=telomeric repeat binding protein 1. telomeric repeat binding protein 1. Encodes a telomeric repeat binding protein with a DNA binding domain at its C terminus. The DNA binding domain has a preference for GGTTTAG sequences and at least five of these repeats are required for recognition by a nearly full-length TRP1 protein.","AT5G04170",null,725.57,-0.37708,0.092881,-4.0598,{"v":4.91e-05,"d":"4.91E-05"},{"v":0.000279,"d":"2.79E-04"},"Calcium-binding EF-hand family protein."]
["AT5G64400","AT12CYS-1",610.79,0.44413,0.12157,3.6532,{"v":0.000259,"d":"2.59E-04"},1.6592E-3,"CHCH domain protein.","AT5G11800","KEA6",79.133,-0.9366,0.23839,-3.9288,{"v":8.54e-05,"d":"8.54E-05"},{"v":0.00053,"d":"5.30E-04"},"full_name=K+ efflux antiporter 6. K+ efflux antiporter 6. member of Putative potassium proton antiporter family","AT5G22300","NIT4",120.26,-1.2093,0.25959,-4.6585,{"v":3.19E-6,"d":"3.19E-06"},{"v":1.92e-05,"d":"1.92E-05"},"full_name=nitrilase 4. nitrilase 4. encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.","AT1G74510",null,38.767,-2.0325,0.38533,-5.2746,{"v":1.33e-07,"d":"1.33E-07"},{"v":7.74e-07,"d":"7.74E-07"},"Galactose oxidase/kelch repeat superfamily protein.","AT4G33625",null,169.41,-0.68649,0.16928,-4.0554,{"v":5e-05,"d":"5.00E-05"},{"v":0.000284,"d":"2.84E-04"},"vacuole protein."]
["AT1G69760",null,64.666,-1.118,0.30605,-3.6529,{"v":0.000259,"d":"2.59E-04"},0.0016605,"suppressor SRP40-like protein.","AT3G62590","PLIP3",171.95,0.65264,0.16613,3.9285,{"v":8.55e-05,"d":"8.55E-05"},{"v":0.00053,"d":"5.30E-04"},"alpha/beta-Hydrolases superfamily protein.","AT2G34060",null,7.789,-6.2388,1.3392,-4.6585,{"v":3.19E-6,"d":"3.19E-06"},{"v":1.92e-05,"d":"1.92E-05"},"Peroxidase superfamily protein.","AT1G11940",null,85.015,-1.2157,0.23053,-5.2733,{"v":1.34e-07,"d":"1.34E-07"},{"v":7.79e-07,"d":"7.79E-07"},"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein.","AT5G19420",null,193.77,0.657,0.16205,4.0544,{"v":5.03e-05,"d":"5.03E-05"},{"v":0.000285,"d":"2.85E-04"},"Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein."]
["AT4G10580",null,14.865,2.0485,0.56124,3.6499,{"v":0.000262,"d":"2.62E-04"},0.001677,"transposable_element_gene.","AT5G16460","SEIPIN1",341.03,0.58247,0.1484,3.9249,{"v":8.68e-05,"d":"8.68E-05"},{"v":0.000537,"d":"5.37E-04"},"Putative adipose-regulatory protein (Seipin).","AT2G25130",null,14.407,-5.23,1.1233,-4.6561,{"v":3.22e-06,"d":"3.22E-06"},{"v":1.94e-05,"d":"1.94E-05"},"ARM repeat superfamily protein.","AT3G18820","RAB7B",700.16,-0.57841,0.10987,-5.2647,{"v":1.4e-07,"d":"1.40E-07"},{"v":8.15e-07,"d":"8.15E-07"},"full_name=RAB GTPase homolog G3F. RAB GTPase homolog G3F.","AT2G31865","PARG2",30.361,1.6287,0.40216,4.0499,{"v":5.12e-05,"d":"5.12E-05"},{"v":2.9E-4,"d":"2.90E-04"},"full_name=poly(ADP-ribose) glycohydrolase 2. poly(ADP-ribose) glycohydrolase 2."]
["AT3G26430",null,553.81,0.54249,0.1487,3.6482,{"v":0.000264,"d":"2.64E-04"},0.0016854,"GDSL-like Lipase/Acylhydrolase superfamily protein. Encodes a functioning member of the GDS(L) lipase family with preference for long chain substrates that does not hydrolyze choline esters.","AT5G16930","SBA2",45.041,1.1963,0.30543,3.9167,{"v":8.98e-05,"d":"8.98E-05"},{"v":0.000555,"d":"5.55E-04"},"AAA-type ATPase family protein.","AT5G62100","BAG2",344.63,-0.8411,0.18077,-4.6528,{"v":3.27E-6,"d":"3.27E-06"},{"v":1.96e-05,"d":"1.96E-05"},"full_name=BCL-2-associated athanogene 2. BCL-2-associated athanogene 2. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.","AT1G05570","CALS1",18.806,-3.5589,0.67707,-5.2564,{"v":1.47e-07,"d":"1.47E-07"},{"v":8.51e-07,"d":"8.51E-07"},"full_name=callose synthase 1. callose synthase 1. Encodes a callose synthase 1 catalytic subunit . Member of Glycosyltransferase Family- 48.","AT4G32551","LUG",723.67,0.37897,0.093763,4.0418,{"v":5.3e-05,"d":"5.30E-05"},{"v":0.0003,"d":"3.00E-04"},"full_name=LEUNIG. transcriptional corepressor LEUNIG. LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors."]
["AT1G17920","HDG12",148.75,-0.80552,0.22103,-3.6443,{"v":0.000268,"d":"2.68E-04"},1.7066E-3,"full_name=homeodomain GLABROUS 12. homeodomain GLABROUS 12. Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. Together with HDG11, it is involved in trichome branching.","AT3G04870","ZDS",443.09,0.48259,0.12331,3.9137,{"v":9.09E-5,"d":"9.09E-05"},{"v":0.00056,"d":"5.60E-04"},"full_name=zeta-carotene desaturase. zeta-carotene desaturase. Involved in the biosynthesis of carotenes and xanthophylls, reduces zeta-carotene to lycopene.","AT1G14440","HB31",7.7738,-6.232,1.3413,-4.6463,{"v":3.38e-06,"d":"3.38E-06"},{"v":2.02E-5,"d":"2.02E-05"},"full_name=homeobox protein 31. homeobox protein 31.","AT5G21170","AKINBETA1",118.75,1.0715,0.20424,5.2464,{"v":1.55E-7,"d":"1.55E-07"},{"v":8.97e-07,"d":"8.97E-07"},"5'-AMP-activated protein kinase beta-2 subunit protein. Encodes AKINbeta1, a subunit of the SnRK1 kinase (Sucrose non-fermenting-1-related protein kinase). Involved in regulation of nitrogen and sugar metabolism.","AT1G74230","GR-RBP5",648.32,-0.38645,0.09573,-4.0368,{"v":5.42e-05,"d":"5.42E-05"},{"v":0.000305,"d":"3.05E-04"},"full_name=glycine-rich RNA-binding protein 5. glycine-rich RNA-binding protein 5. encodes a glycine-rich RNA binding protein."]
["AT3G48670","IDN2",1755,-0.46102,0.12672,-3.6381,{"v":0.000275,"d":"2.75E-04"},1.7454E-3,"full_name=INVOLVED IN DE NOVO 2. XH/XS domain-containing protein. Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.","AT2G03680","SPR1",317.3,-0.53448,0.13679,-3.9073,{"v":9.33e-05,"d":"9.33E-05"},{"v":0.000575,"d":"5.75E-04"},"full_name=SPIRAL1. spiral1. The SPR1 gene encodes a plant-specific 12-kD protein which has a repeated motif at both ends, separated by a predicted rod-like domain, suggesting that it may act as an intermolecular linker. Ubiquitously expressed and belongs to a six-member gene family in Arabidopsis; expressed in transgenic seedlings localized to microtubules within the cortical array, preprophase band, phragmoplast, and mitotic spindle.","AT1G48460",null,144.52,0.95308,0.2053,4.6423,{"v":3.45E-6,"d":"3.45E-06"},{"v":2.06e-05,"d":"2.06E-05"},"tRNA-processing ribonuclease BN.","AT2G43370",null,56.221,1.6913,0.32284,5.2388,{"v":1.62e-07,"d":"1.62E-07"},{"v":9.33E-7,"d":"9.33E-07"},"RNA-binding (RRM/RBD/RNP motifs) family protein.","AT5G63290","ATHEMN1",80.283,1.0211,0.25324,4.0323,{"v":5.52E-5,"d":"5.52E-05"},{"v":0.000311,"d":"3.11E-04"},"Radical SAM superfamily protein. CPO3 (At5g63290) has not been characterized per se, but is a homolog of the CPDH/HEMN (see review by Layer et al, 2010). The homolog from cyanobacteria was recently characterized to be a CPDH (see Goto et al, 2010), but not yet from plants."]
["AT1G16630",null,8.7657,-3.196,0.87921,-3.6351,{"v":0.000278,"d":"2.78E-04"},1.7626E-3,"transmembrane protein.","AT2G38120","AUX1",49.35,-1.2231,0.31359,-3.9004,{"v":9.6e-05,"d":"9.60E-05"},{"v":0.00059,"d":"5.90E-04"},"full_name=AUXIN RESISTANT 1. Transmembrane amino acid transporter family protein. Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning. Shoot supplied ammonium targets AUX1 and inhibits lateral root emergence.","AT1G60790","TBL2",171.07,1.0428,0.22476,4.6396,{"v":3.49E-6,"d":"3.49E-06"},{"v":2.08e-05,"d":"2.08E-05"},"full_name=TRICHOME BIREFRINGENCE-LIKE 2. trichome birefringence-like protein (DUF828). Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT3G10220","EMB2804",227.66,0.77754,0.14862,5.2317,{"v":1.68E-7,"d":"1.68E-07"},{"v":9.67e-07,"d":"9.67E-07"},"full_name=EMBRYO DEFECTIVE 2804. tubulin folding cofactor B. Encodes a tubulin-binding cofactor. Homozygous mutant plants are embryo lethal. Heterozygous mutant plants showed increased ploidy and higher numbers of spindles and phragmoplasts, suggesting a role in cell division.","AT3G25990",null,20.981,2.1502,0.53357,4.0298,{"v":5.58e-05,"d":"5.58E-05"},{"v":0.000313,"d":"3.13E-04"},"Homeodomain-like superfamily protein."]
["AT5G08570",null,1241.6,0.36158,0.099574,3.6312,{"v":0.000282,"d":"2.82E-04"},1.7856E-3,"Pyruvate kinase family protein.","AT5G58250","EMB3143",111.55,-0.85783,0.22035,-3.8931,{"v":9.9e-05,"d":"9.90E-05"},{"v":0.000607,"d":"6.07E-04"},"full_name=EMBRYO DEFECTIVE 3143. YCF54.","AT5G61960","ML1",380.66,-0.90874,0.19622,-4.6312,{"v":3.64e-06,"d":"3.64E-06"},{"v":2.16E-5,"d":"2.16E-05"},"full_name=MEI2-like protein 1. MEI2-like protein 1. A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML1 is a member of two sister clades of mei2-like gene family, AML1 through AML5 and belongs to the clade named ALM14. AML1 is expressed during early embryo development, particularly along embryonic axis at torpedo stage, in shoot apex (weaker expression) and in the organogenic regions of floral apices.","AT5G56290","PEX5",699.69,0.5757,0.11019,5.2244,{"v":1.75e-07,"d":"1.75E-07"},{"v":1e-06,"d":"1.00E-06"},"full_name=peroxin 5. peroxin 5. Encodes the peroxisomal targeting signal type 1 receptor that facilitates peroxisomal protein translocation. It recognizes proteins with the PTS1 consensus sequence (tripeptide SKL or a conserved variant) at the extreme C terminus. The protein has several domains, including C-terminal tetratricopeptide repeat motifs which act in binding the C-terminal SKL targeting signal. The mechanism of transport has been worked out in other organisms: The receptor recognizes and binds cytosolic PTS1-containing proteins. The PEX5-PTS1 complex binds a PEX14/PEX13 receptor complex at the peroxisome membrane and is translocated into the peroxisome matrix in a process dependent on PEX2,PEX10, and PEX12. In the peroxisome matrix, PEX5 releases its cargo and is recycled to the cytosol in a process dependent on PEX1, PEX4, PEX6 and PEX22. It is also involved, in conjunction with PEX7, in PTS1- and PTS2-dependent peroxisomal protein import. RNAi experiments suggest that PEX5 is necessary for the maintenance of both glyoxysomal and leaf peroxisomal functions.","AT4G27960","UBC9",468.42,-0.46991,0.11672,-4.0259,{"v":5.68e-05,"d":"5.68E-05"},{"v":0.000318,"d":"3.18E-04"},"full_name=ubiquitin conjugating enzyme 9. ubiquitin conjugating enzyme 9. ubiquitin conjugating enzyme"]
["AT2G01140","PDE345",2422.2,-0.38487,0.10608,-3.6282,{"v":0.000285,"d":"2.85E-04"},0.0018038,"full_name=PIGMENT DEFECTIVE 345. Aldolase superfamily protein.","AT5G63190","MRF1",917.72,0.42839,0.11013,3.8897,{"v":1E-4,"d":"1.00E-04"},{"v":0.000615,"d":"6.15E-04"},"MA3 domain-containing protein.","AT3G43520",null,724.51,0.51371,0.11103,4.6269,{"v":3.71e-06,"d":"3.71E-06"},{"v":2.2e-05,"d":"2.20E-05"},"Transmembrane proteins 14C.","AT5G58860","CYP86A1",15.205,-4.6217,0.8853,-5.2205,{"v":1.78e-07,"d":"1.78E-07"},{"v":1.02E-6,"d":"1.02E-06"},"full_name=cytochrome P450, family 86, subfamily A, polypeptide 1. cytochrome P450, family 86, subfamily A, polypeptide 1. Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed significantly only in root tissue.","AT3G48000","ALDH2B4",3186.6,0.25899,0.064399,4.0216,{"v":5.78e-05,"d":"5.78E-05"},{"v":0.000323,"d":"3.23E-04"},"full_name=aldehyde dehydrogenase 2B4. aldehyde dehydrogenase 2B4. Encodes a putative (NAD+) aldehyde dehydrogenase."]
["AT1G76740",null,7.6961,-4.3772,1.2078,-3.6241,{"v":2.9E-4,"d":"2.90E-04"},1.8307E-3,"hypothetical protein.","AT2G02580","CYP71B9",202.45,0.73077,0.18805,3.886,{"v":1.02E-4,"d":"1.02E-04"},{"v":0.000623,"d":"6.23E-04"},"full_name=cytochrome P450, family 71, subfamily B, polypeptide 9. cytochrome P450, family 71, subfamily B, polypeptide 9. member of CYP71B","AT4G26690","SHV3",62.831,-1.2641,0.27346,-4.6226,{"v":3.79e-06,"d":"3.79E-06"},{"v":2.25e-05,"d":"2.25E-05"},"full_name=SHAVEN 3. PLC-like phosphodiesterase family protein. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development.","AT1G80160","GLYI7",499.22,-0.91562,0.1754,-5.2202,{"v":1.79E-7,"d":"1.79E-07"},{"v":1.02E-6,"d":"1.02E-06"},"full_name=glyoxylase I 7. Lactoylglutathione lyase / glyoxalase I family protein.","AT2G25850","PAPS2",171.23,-0.6806,0.1693,-4.0201,{"v":5.82e-05,"d":"5.82E-05"},{"v":0.000325,"d":"3.25E-04"},"full_name=poly(A) polymerase 2. poly(A) polymerase 2. Encodes a poly(A) polymerase. Located in the nucleus."]
["AT5G62190","PRH75",935.48,0.40188,0.1111,3.6174,{"v":0.000298,"d":"2.98E-04"},0.0018723,"DEAD box RNA helicase (PRH75). DEAD/DEAH box RNA helicase PRH75","AT3G04080","APY1",177.33,-0.64887,0.16742,-3.8757,{"v":1.06E-4,"d":"1.06E-04"},{"v":0.000648,"d":"6.48E-04"},"full_name=apyrase 1. apyrase 1. Encodes an Golgi-localized integral membrane enzyme with nucleoside diphosphate activity that when mutated in combination with ATAPY2 causes a complete inhibition of pollen germination.","AT4G26270","PFK3",219.9,0.79852,0.17308,4.6136,{"v":3.96e-06,"d":"3.96E-06"},{"v":2.34E-5,"d":"2.34E-05"},"full_name=phosphofructokinase 3. phosphofructokinase 3.","AT1G16700",null,166.15,-0.88332,0.16958,-5.2088,{"v":1.9e-07,"d":"1.90E-07"},{"v":1.09e-06,"d":"1.09E-06"},"Alpha-helical ferredoxin.","AT4G01250","WRKY22",82.923,-0.9828,0.24482,-4.0144,{"v":5.96e-05,"d":"5.96E-05"},{"v":0.000332,"d":"3.32E-04"},"WRKY family transcription factor. AtWRKY22 is a member of WRKY Transcription Factor; Group II-e. It is involved in regulation of dark induced leaf senescence."]
["AT4G38380",null,43.219,1.1501,0.31841,3.6121,{"v":0.000304,"d":"3.04E-04"},0.0019082,"MATE efflux family protein.","AT1G15230",null,656.52,0.51478,0.13295,3.8719,{"v":1.08E-4,"d":"1.08E-04"},{"v":0.000657,"d":"6.57E-04"},"hypothetical protein.","AT1G18070","EF-1&#945;",1193.2,0.52,0.11287,4.6072,{"v":4.08e-06,"d":"4.08E-06"},{"v":2.41E-5,"d":"2.41E-05"},"Translation elongation factor EF1A/initiation factor IF2gamma family protein.","AT5G40780","LHT1",275.29,1.025,0.197,5.2029,{"v":1.96e-07,"d":"1.96E-07"},{"v":1.12e-06,"d":"1.12E-06"},"full_name=lysine histidine transporter 1. lysine histidine transporter 1. Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll.","AT1G23310","GGT1",486.1,0.47631,0.11873,4.0118,{"v":6.03e-05,"d":"6.03E-05"},{"v":0.000335,"d":"3.35E-04"},"full_name=glutamate:glyoxylate aminotransferase. glutamate:glyoxylate aminotransferase. Identified by cloning the gene that corresponded to a purified protein having glyoxylate aminotransferase activity. Localized to the peroxisome and thought to be involved in photorespiration/ metabolic salvage pathway."]
["AT2G46780",null,40.08,-1.2538,0.34808,-3.602,{"v":0.000316,"d":"3.16E-04"},0.0019796,"RNA-binding (RRM/RBD/RNP motifs) family protein.","AT3G09770","LOG2",416.36,0.48421,0.1252,3.8674,{"v":1.1E-4,"d":"1.10E-04"},{"v":0.000668,"d":"6.68E-04"},"full_name=LOSS OF GDU 2. RING/U-box superfamily protein. Encodes a ubiquitin E3 ligase LOG2 (LOSS OF GDU2). Required for GLUTAMINE DUMPER1(GDU1)-induced amino secretion.","AT5G24600",null,158.33,-1.0391,0.22569,-4.6043,{"v":4.14e-06,"d":"4.14E-06"},{"v":2.44E-5,"d":"2.44E-05"},"TRP-like ion channel protein (Protein of unknown function, DUF599).","AT2G22970","SCPL11",17.966,-5.9017,1.1351,-5.1991,{"v":2e-07,"d":"2.00E-07"},{"v":1.14e-06,"d":"1.14E-06"},"full_name=serine carboxypeptidase-like 11. serine carboxypeptidase-like 11.","AT4G09040","CP33C",107.35,0.83854,0.20918,4.0088,{"v":6.1e-05,"d":"6.10E-05"},{"v":3.39E-4,"d":"3.39E-04"},"RNA-binding (RRM/RBD/RNP motifs) family protein."]
["AT3G27870","ALA8",277.01,0.50587,0.14055,3.5991,{"v":3.19E-4,"d":"3.19E-04"},0.0019979,"ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein.","AT3G03950","ECT1",166.56,0.6583,0.17053,3.8602,{"v":1.13E-4,"d":"1.13E-04"},{"v":6.87E-4,"d":"6.87E-04"},"full_name=evolutionarily conserved C-terminal region 1. evolutionarily conserved C-terminal region 1. Physically interacts with CIPK1. Located in the nucleus.","AT5G42900","COR27",264.46,-0.84728,0.18422,-4.5992,{"v":4.24e-06,"d":"4.24E-06"},{"v":2.49e-05,"d":"2.49E-05"},"full_name=cold regulated gene 27. cold regulated protein 27.","AT4G09750",null,101.96,1.4304,0.27544,5.1932,{"v":2.07e-07,"d":"2.07E-07"},{"v":1.17E-6,"d":"1.17E-06"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT1G80120",null,8.6335,-4.8527,1.2113,-4.0063,{"v":6.17e-05,"d":"6.17E-05"},{"v":0.000342,"d":"3.42E-04"},"LURP-one-like protein (DUF567)."]
["AT5G42720",null,56.623,-1.0426,0.28972,-3.5987,{"v":0.00032,"d":"3.20E-04"},0.0020005,"Glycosyl hydrolase family 17 protein.","AT5G10000","FD4",10.206,3.3006,0.85505,3.8601,{"v":1.13E-4,"d":"1.13E-04"},{"v":6.87E-4,"d":"6.87E-04"},"full_name=ferredoxin 4. ferredoxin 4.","AT3G46600",null,17.745,2.4331,0.52931,4.5967,{"v":4.29e-06,"d":"4.29E-06"},{"v":2.52e-05,"d":"2.52E-05"},"GRAS family transcription factor.","AT3G27330",null,233.06,0.91757,0.17682,5.1892,{"v":2.11E-7,"d":"2.11E-07"},{"v":1.2e-06,"d":"1.20E-06"},"zinc finger (C3HC4-type RING finger) family protein.","AT4G13918",null,69.253,-1.0421,0.26016,-4.0054,{"v":6.19E-5,"d":"6.19E-05"},{"v":0.000343,"d":"3.43E-04"},"Natural antisense transcript overlaps with AT4G13920. Potential natural antisense gene, locus overlaps with AT4G13920 Natural antisense transcript overlaps with AT4G13920"]
["AT1G35680","RPL21C",180.99,-0.65141,0.18123,-3.5943,{"v":0.000325,"d":"3.25E-04"},0.0020297,"full_name=chloroplast ribosomal protein L21. Ribosomal protein L21. Encodes a chloroplast ribosomal protein L21 that is required for chloroplast development and embryogenesis.","AT1G22882","SUN3",229.36,0.58968,0.15293,3.8559,{"v":1.15E-4,"d":"1.15E-04"},{"v":0.000697,"d":"6.97E-04"},"Galactose-binding protein. Encodes a member of the mid-SUN subfamily of SUN-domain proteins that is localized to both the nuclear envelope and the ER. It is involved in early seed development and nuclear morphology.","AT1G06640",null,80.115,-1.146,0.24946,-4.5941,{"v":4.35e-06,"d":"4.35E-06"},{"v":2.55E-5,"d":"2.55E-05"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase","AT4G31830",null,2116.6,-0.41382,0.079807,-5.1852,{"v":2.16E-7,"d":"2.16E-07"},{"v":1.22E-6,"d":"1.22E-06"},"transmembrane protein.","AT5G23680",null,200.79,0.66481,0.16626,3.9985,{"v":6.37e-05,"d":"6.37E-05"},{"v":0.000352,"d":"3.52E-04"},"Sterile alpha motif (SAM) domain-containing protein."]
["AT4G34200","EDA9",338.49,-0.57778,0.16094,-3.5901,{"v":0.000331,"d":"3.31E-04"},2.0596E-3,"full_name=embryo sac development arrest 9. D-3-phosphoglycerate dehydrogenase. Encodes a 3-phosphoglycerate dehydrogenase that is essential for embryo and pollen development.","AT1G09490",null,407.98,-0.46885,0.12167,-3.8534,{"v":1.16E-4,"d":"1.16E-04"},{"v":0.000703,"d":"7.03E-04"},"NAD(P)-binding Rossmann-fold superfamily protein. similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase; Location of EST gb:H37170, gb:H77227 and gb:AA605565","AT3G45770",null,273.95,0.68251,0.14865,4.5914,{"v":4.4e-06,"d":"4.40E-06"},{"v":2.58E-5,"d":"2.58E-05"},"Polyketide synthase, enoylreductase family protein.","AT1G19397",null,122.66,1.1071,0.21357,5.1838,{"v":2.17E-7,"d":"2.17E-07"},{"v":1.23e-06,"d":"1.23E-06"},"transmembrane protein.","AT3G27570",null,160.55,0.74791,0.1871,3.9975,{"v":6.4e-05,"d":"6.40E-05"},{"v":0.000353,"d":"3.53E-04"},"Sucrase/ferredoxin-like family protein."]
["AT1G49750",null,10.304,-2.6827,0.74799,-3.5865,{"v":0.000335,"d":"3.35E-04"},2.0842E-3,"Leucine-rich repeat (LRR) family protein.","AT1G15330",null,231.72,-0.6935,0.18022,-3.8482,{"v":0.000119,"d":"1.19E-04"},{"v":0.000717,"d":"7.17E-04"},"Cystathionine beta-synthase (CBS) protein.","AT3G04380","SUVR4",56.293,-1.2899,0.28139,-4.5839,{"v":4.56e-06,"d":"4.56E-06"},{"v":2.67e-05,"d":"2.67E-05"},"SET-domain containing protein lysine methyltransferase family protein. Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.","AT2G42190",null,50.973,1.8352,0.35422,5.1809,{"v":2.21e-07,"d":"2.21E-07"},{"v":1.25e-06,"d":"1.25E-06"},"rho GTPase-activating gacO-like protein.","AT4G38350","ATNPC1-2",1142.1,-0.33318,0.083417,-3.9942,{"v":6.49e-05,"d":"6.49E-05"},{"v":3.57E-4,"d":"3.57E-04"},"Patched family protein."]
["AT5G57900","SKIP1",134.48,0.77368,0.21604,3.5811,{"v":0.000342,"d":"3.42E-04"},0.0021239,"full_name=SKP1 interacting partner 1. SKP1 interacting partner 1. F-box protein, interacts with SKP1/ASK1 subunit of SCF ubiquitin ligase in a glucose-dependent manner","AT3G22370","AOX1A",81.638,1.0152,0.26404,3.8448,{"v":1.21E-4,"d":"1.21E-04"},{"v":0.000726,"d":"7.26E-04"},"full_name=alternative oxidase 1A. alternative oxidase 1A. Encodes AOX1a, an isoform of alternative oxidase that is expressed in rosettes, flowers, and root. The alternative oxidase of plant mitochondria transfers electrons from the ubiquinone pool to oxygen without energy conservations. It is regulated through transcriptional control and by pyruvate. Plays a role in shoot acclimation to low temperature. Also is capable of ameliorating reactive oxygen species production when the cytochrome pathway is inhibited. AOX1a also functions as a marker for mitochondrial retrograde response.","AT1G76130","AMY2",244.55,0.72797,0.15908,4.576,{"v":4.74e-06,"d":"4.74E-06"},{"v":2.76E-5,"d":"2.76E-05"},"full_name=alpha-amylase-like 2. alpha-amylase-like 2. alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative, strong similarity to alpha-amylase GI:7532799 from (Malus x domestica);contains Pfam profile PF00128: Alpha amylase, catalytic domain. Predicted to be secreted based on SignalP analysis.","AT1G65430","ARI8",336.34,-0.65469,0.12662,-5.1704,{"v":2.34E-7,"d":"2.34E-07"},{"v":1.32e-06,"d":"1.32E-06"},"full_name=ARIADNE 8. IBR domain-containing protein.","AT1G70580","AOAT2",2201.8,0.30406,0.076201,3.9903,{"v":6.6e-05,"d":"6.60E-05"},{"v":0.000363,"d":"3.63E-04"},"full_name=alanine-2-oxoglutarate aminotransferase 2. alanine-2-oxoglutarate aminotransferase 2. Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro."]
["AT1G06243",null,11.143,3.407,0.95215,3.5783,{"v":0.000346,"d":"3.46E-04"},0.0021437,null,"AT1G15400","MASS2",132.37,0.73413,0.19112,3.8413,{"v":1.22E-4,"d":"1.22E-04"},{"v":0.000735,"d":"7.35E-04"},"hypothetical protein.","AT2G40475","ASG8",59.922,-1.3346,0.29189,-4.5721,{"v":4.83e-06,"d":"4.83E-06"},{"v":2.81e-05,"d":"2.81E-05"},"full_name=ALTERED SEED GERMINATION 8. hypothetical protein.","AT4G25650","ACD1-LIKE",221.38,-0.8402,0.1626,-5.1673,{"v":2.38e-07,"d":"2.38E-07"},{"v":1.34e-06,"d":"1.34E-06"},"full_name=ACD1-like. ACD1-like protein. Similar to ACD1. Leaves of antisense ACD1-like plants turn yellow in darkness like wild-type whereas antisense ACD1 plants remain dark after five days of dark treatment.","AT4G31510",null,529.91,-0.40728,0.10217,-3.9865,{"v":6.71e-05,"d":"6.71E-05"},{"v":3.68E-4,"d":"3.68E-04"},"major centromere autoantigen B-like protein."]
["AT1G75950","SKP1",1485.2,0.38614,0.10819,3.5689,{"v":0.000358,"d":"3.58E-04"},0.0022168,"full_name=S phase kinase-associated protein 1. S phase kinase-associated protein 1. SKP1 is core component of the SCF family of E3 ubiquitin ligases and serves to tether the rest of the complex to an F-box protein, which provides specificity in binding to ubiquitin ligase substrate proteins. Predominately expressed from leptotene to pachytene. Negatively regulates recombination. Interacts with P0, a silencing suppressor protein encoded by poleroviruses by means of a conserved minimal F-box motif.","AT1G14440","HB31",33.305,-1.4071,0.36729,-3.831,{"v":0.000128,"d":"1.28E-04"},{"v":0.000765,"d":"7.65E-04"},"full_name=homeobox protein 31. homeobox protein 31.","AT1G13210","ACA.l",26.944,-2.0158,0.44118,-4.5691,{"v":4.9e-06,"d":"4.90E-06"},{"v":2.85e-05,"d":"2.85E-05"},"full_name=autoinhibited Ca2+/ATPase II. autoinhibited Ca2+/ATPase II.","AT1G80980",null,102.42,1.3065,0.25308,5.1622,{"v":2.44e-07,"d":"2.44E-07"},{"v":1.37E-6,"d":"1.37E-06"},"stress response NST1-like protein.","AT5G16780","DOT2",1019.6,0.32697,0.082074,3.9839,{"v":6.78e-05,"d":"6.78E-05"},{"v":0.000371,"d":"3.71E-04"},"full_name=DEFECTIVELY ORGANIZED TRIBUTARIES 2. SART-1 family. Encodes a protein belonging to SART-1 family. The gene is expressed in the basal region of the developing embryo during heart stage. Phenotypic analyses of dot2 mutants suggest that this protein plays a role in root, shoot, and flower development. dot2 mutants are dwarved plants that display an aberrant spurred leaf venation pattern and fail to flower. In the roots DOT2 appears to be require for normal meristem organization and maintenance and the proper expression of PIN and PLT genes."]
["AT1G12760",null,398.12,0.45853,0.12869,3.563,{"v":0.000367,"d":"3.67E-04"},0.0022622,"Zinc finger, C3HC4 type (RING finger) family protein.","AT4G28450",null,92.783,0.90177,0.23584,3.8237,{"v":0.000131,"d":"1.31E-04"},{"v":0.000786,"d":"7.86E-04"},"WD repeat and SOF domain-containing protein 1. This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase","AT5G60920","COB",545.17,-0.70076,0.15357,-4.5631,{"v":5.04E-6,"d":"5.04E-06"},{"v":2.92e-05,"d":"2.92E-05"},"full_name=COBRA. COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family. Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.","AT3G60370",null,19.366,3.4429,0.6678,5.1557,{"v":2.53E-7,"d":"2.53E-07"},{"v":1.42E-6,"d":"1.42E-06"},"FKBP-like peptidyl-prolyl cis-trans isomerase family protein. Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined.","AT1G70410","BCA4",18.355,2.5338,0.63728,3.976,{"v":7.01e-05,"d":"7.01E-05"},{"v":0.000383,"d":"3.83E-04"},"full_name=beta carbonic anhydrase 4. beta carbonic anhydrase 4. Encodes a putative beta-carbonic anhydrase betaCA4. Together with betaCA1 (At3g01500) regulates CO2-controlled stomatal movements in guard cells."]
["AT2G35510","SRO1",506.03,0.40598,0.11408,3.5586,{"v":0.000373,"d":"3.73E-04"},0.002296,"full_name=similar to RCD one 1. similar to RCD one 1. Encodes a WWE domain-containing protein with 76% similarity to RCD1. The protein also contains a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.","AT3G20340",null,173.48,-0.76721,0.20095,-3.818,{"v":1.35E-4,"d":"1.35E-04"},{"v":8.03E-4,"d":"8.03E-04"},"protein expression protein. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.","AT4G37990","ELI3-2",16.956,2.653,0.58223,4.5565,{"v":5.2e-06,"d":"5.20E-06"},{"v":3.01E-5,"d":"3.01E-05"},"full_name=elicitor-activated gene 3-2. cinnamyl alcohol dehydrogenase 8. Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases, this enzyme does not have mannitol dehydrogenase activity.","AT5G50460",null,131.1,-1.0375,0.2015,-5.1488,{"v":2.62e-07,"d":"2.62E-07"},{"v":1.47e-06,"d":"1.47E-06"},"secE/sec61-gamma protein transport protein.","AT3G56850","AREB3",261.53,0.56411,0.14197,3.9735,{"v":7.08E-5,"d":"7.08E-05"},{"v":3.86E-4,"d":"3.86E-04"},"full_name=ABA-responsive element binding protein 3. ABA-responsive element binding protein 3. Encodes an ABA-responsive element binding protein with a bZIP domain. Located in the nucleus and expressed in the embryo during seed maturation."]
["AT1G78970","LUP1",4.1571,-5.431,1.5278,-3.5547,{"v":0.000378,"d":"3.78E-04"},0.0023263,"full_name=lupeol synthase 1. lupeol synthase 1. Lupeol synthase. Converts oxidosqualene to multiple triterpene alcohols and a triterpene diols. This conversion proceeds through the formation of a 17&#946;-dammarenyl cation.","AT2G46890","PNET3",36.435,-1.3403,0.35116,-3.8166,{"v":1.35E-4,"d":"1.35E-04"},{"v":0.000806,"d":"8.06E-04"},"3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295).","AT1G53270","ABCG10",130.18,-0.92504,0.20316,-4.5533,{"v":5.28e-06,"d":"5.28E-06"},{"v":3.05e-05,"d":"3.05E-05"},"full_name=ATP-binding cassette G10. ABC-2 type transporter family protein.","AT5G49450","bZIP1",71.371,1.8132,0.35271,5.1408,{"v":2.74e-07,"d":"2.74E-07"},{"v":1.53E-6,"d":"1.53E-06"},"full_name=basic leucine-zipper 1. basic leucine-zipper 1. Encodes a transcription activator is a positive regulator of plant tolerance to salt, osmotic and drought stresses.","AT1G01725",null,115.32,-0.82336,0.20748,-3.9685,{"v":7.23e-05,"d":"7.23E-05"},{"v":0.000394,"d":"3.94E-04"},"adenylosuccinate synthetase."]
["AT5G04130","GYRB2",96.144,0.82264,0.23176,3.5495,{"v":3.86E-4,"d":"3.86E-04"},0.0023688,"full_name=DNA GYRASE B2. DNA GYRASE B2.","AT3G58660",null,139.39,0.7165,0.18798,3.8116,{"v":0.000138,"d":"1.38E-04"},{"v":0.000821,"d":"8.21E-04"},"Ribosomal protein L1p/L10e family.","AT4G20460",null,132.83,-0.93997,0.20667,-4.5482,{"v":5.41e-06,"d":"5.41E-06"},{"v":3.12e-05,"d":"3.12E-05"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT1G14840","MAP70-4",38.909,-1.8756,0.3652,-5.1359,{"v":2.81e-07,"d":"2.81E-07"},{"v":1.57E-6,"d":"1.57E-06"},"full_name=microtubule-associated proteins 70-4. microtubule-associated proteins 70-4. Encodes a microtubule associated protein (MAP70-4). Expressed in all tissues.","AT4G28811",null,56.714,-1.1571,0.29176,-3.9658,{"v":7.31e-05,"d":"7.31E-05"},{"v":3.97E-4,"d":"3.97E-04"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein."]
["AT4G28400",null,66.765,-0.94502,0.26689,-3.5409,{"v":0.000399,"d":"3.99E-04"},0.0024427,"Protein phosphatase 2C family protein.","AT5G11100","SYTD",244.31,-0.56985,0.14966,-3.8076,{"v":0.00014,"d":"1.40E-04"},{"v":0.000833,"d":"8.33E-04"},"Calcium-dependent lipid-binding (CaLB domain) family protein.","AT5G62130",null,172.17,-0.88399,0.19454,-4.5439,{"v":5.52e-06,"d":"5.52E-06"},{"v":3.18E-5,"d":"3.18E-05"},"Per1-like family protein.","AT3G10130","SOUL4",685.05,0.52197,0.10178,5.1284,{"v":2.92e-07,"d":"2.92E-07"},{"v":1.63e-06,"d":"1.63E-06"},"SOUL heme-binding family protein.","AT1G52825",null,26.198,-1.7042,0.4302,-3.9614,{"v":7.45e-05,"d":"7.45E-05"},{"v":0.000404,"d":"4.04E-04"},"sporulation-specific protein."]
["AT1G59640","BPEp",57.93,1.0119,0.28614,3.5364,{"v":4.06E-4,"d":"4.06E-04"},2.4803E-3,"full_name=BIG PETAL P. transcription factor BIG PETAL P (BPE). A basic helix-loop-helix encoding gene (BIGPETAL, BPE) involved in the control of petal size. BPE is expressed via two mRNAs derived from an alternative splicing event. The BPEub (AT1G59640.1)transcript is expressed ubiquitously, whereas the BPEp (AT1G59640.2) transcript is preferentially expressed in petals. Plants that lack the petal-expressed variant BPEp have larger petals as a result of increased cell size. BPEp is positively regulated downstream of APETALA3, PISTILLATA, APETALA1 and PISTILLATA3 and is negatively regulated downstream of AGAMOUS.","AT1G57720",null,1315,-0.40805,0.1073,-3.803,{"v":0.000143,"d":"1.43E-04"},{"v":0.000847,"d":"8.47E-04"},"Translation elongation factor EF1B, gamma chain.","AT1G10750",null,20.746,-2.7405,0.60451,-4.5334,{"v":5.8e-06,"d":"5.80E-06"},{"v":3.33e-05,"d":"3.33E-05"},"carboxyl-terminal peptidase, putative (DUF239).","AT5G48810","CB5-D",326.57,0.70884,0.13834,5.1239,{"v":2.99e-07,"d":"2.99E-07"},{"v":1.66E-6,"d":"1.66E-06"},"full_name=cytochrome B5 isoform D. cytochrome B5 isoform D. Encodes a cytochrome b5 isoform that localizes to the ER. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro and the protein appears to be subject to glycosylation.","AT3G15355","UBC25",258.04,0.54503,0.13769,3.9582,{"v":7.55e-05,"d":"7.55E-05"},{"v":0.000409,"d":"4.09E-04"},"full_name=ubiquitin-conjugating enzyme 25. ubiquitin-conjugating enzyme 25."]
["AT4G30520","SARK",168.77,-0.64645,0.1828,-3.5363,{"v":4.06E-4,"d":"4.06E-04"},0.0024805,"full_name=SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE. Leucine-rich repeat protein kinase family protein. Encodes SARK (SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE). Regulates leaf senescence through synergistic actions of auxin and ethylene.","AT4G17390",null,692.96,-0.40721,0.10712,-3.8014,{"v":1.44E-4,"d":"1.44E-04"},{"v":8.52E-4,"d":"8.52E-04"},"Ribosomal protein L23/L15e family protein.","AT5G66570","PSBO1",19.003,-2.4468,0.53978,-4.533,{"v":5.82e-06,"d":"5.82E-06"},{"v":3.34e-05,"d":"3.34E-05"},"full_name=PS II oxygen-evolving complex 1. PS II oxygen-evolving complex 1. Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In <i>Arabidopsis thaliana</i> the PsbO proteins are encoded by two genes: <i>psbO1</i> and <i>psbO2</i>. PsbO1 is the major isoform in the wild-type. In plsp1-1 mutant plastids, the nonmature form of the protein localizes in the membrane.","AT2G40475","ASG8",17.181,-5.8344,1.1388,-5.1234,{"v":3e-07,"d":"3.00E-07"},{"v":1.67e-06,"d":"1.67E-06"},"full_name=ALTERED SEED GERMINATION 8. hypothetical protein.","AT2G42150",null,228.44,-0.58898,0.14881,-3.9579,{"v":7.56e-05,"d":"7.56E-05"},{"v":0.000409,"d":"4.09E-04"},"DNA-binding bromodomain-containing protein."]
["AT5G12930",null,67.435,-0.88933,0.25176,-3.5324,{"v":0.000412,"d":"4.12E-04"},0.0025119,"inactive rhomboid protein.","AT1G11440",null,84.289,0.97557,0.25679,3.7991,{"v":1.45E-4,"d":"1.45E-04"},{"v":0.000858,"d":"8.58E-04"},"hypothetical protein.","AT4G31750","WIN2",200.33,0.83689,0.18474,4.5302,{"v":5.89e-06,"d":"5.89E-06"},{"v":3.38e-05,"d":"3.38E-05"},"full_name=HOPW1-1-interacting 2. HOPW1-1-interacting 2. Encodes HopW1-1-Interacting protein 2 (WIN2). Interacts with the P. syringae effector HopW1-1. WIN2 has protein phosphatase activity. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320).","AT5G12140","CYS1",126.05,-0.99463,0.19441,-5.116,{"v":3.12e-07,"d":"3.12E-07"},{"v":1.73E-6,"d":"1.73E-06"},"full_name=cystatin-1. cystatin-1. Encodes a cystatin.","AT3G49800",null,340.72,0.53905,0.13635,3.9533,{"v":7.71e-05,"d":"7.71E-05"},{"v":0.000416,"d":"4.16E-04"},"BSD domain-containing protein."]
["AT5G24920","GDU5",30.549,-1.3577,0.38478,-3.5286,{"v":0.000418,"d":"4.18E-04"},0.0025446,"full_name=glutamine dumper 5. glutamine dumper 5. Encodes a member of the GDU (glutamine dumper) family proteins involved in amino acid export: At4g31730 (GDU1), At4g25760 (GDU2), At5g57685 (GDU3), At2g24762 (GDU4), At5g24920 (GDU5), At3g30725 (GDU6) and At5g38770 (GDU7).","AT5G08560","WDR26",897.87,0.36697,0.096665,3.7963,{"v":1.47E-4,"d":"1.47E-04"},{"v":0.000867,"d":"8.67E-04"},"transducin family protein / WD-40 repeat family protein.","AT2G04690",null,299.84,0.75451,0.16681,4.5231,{"v":6.09e-06,"d":"6.09E-06"},{"v":3.49e-05,"d":"3.49E-05"},"Pyridoxamine 5'-phosphate oxidase family protein.","AT3G62040",null,9.684,-6.8893,1.3477,-5.1118,{"v":3.19e-07,"d":"3.19E-07"},{"v":1.76e-06,"d":"1.76E-06"},"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein.","AT3G06670","SMEK1",933.48,0.3254,0.082386,3.9497,{"v":7.82e-05,"d":"7.82E-05"},{"v":0.000422,"d":"4.22E-04"},"binding protein."]
["AT1G65470","FAS1",18.349,-1.7892,0.50765,-3.5245,{"v":0.000424,"d":"4.24E-04"},0.0025789,"full_name=FASCIATA 1. chromatin assembly factor-1 (FASCIATA1) (FAS1). Chromatin Assembly Factor-1 (CAF-1) p150 subunit. Mutants have reduced heterochromatin content. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis.","AT1G21060",null,58.715,-1.0315,0.27196,-3.793,{"v":0.000149,"d":"1.49E-04"},{"v":0.000876,"d":"8.76E-04"},"Serine/Threonine-kinase, putative (Protein of unknown function, DUF547).","AT1G77930","DJC65",424.77,0.70206,0.1554,4.5178,{"v":6.25e-06,"d":"6.25E-06"},{"v":3.57E-5,"d":"3.57E-05"},"Chaperone DnaJ-domain superfamily protein.","AT3G14415","GOX2",89.4,1.2225,0.23926,5.1095,{"v":3.23e-07,"d":"3.23E-07"},{"v":1.78e-06,"d":"1.78E-06"},"full_name=glycolate oxidase 2. Aldolase-type TIM barrel family protein. Encodes a glycolate oxidase that modulates reactive oxygen species-mediated signal transduction during nonhost resistance.","AT5G35210","PTM",790.14,0.35493,0.090007,3.9433,{"v":8.04e-05,"d":"8.04E-05"},{"v":0.000432,"d":"4.32E-04"},"full_name=PHD type transcription factor with transmembrane domains. PHD type transcription factor with transmembrane domain protein (PTM). Encodes a chloroplast envelope-bound plant homeodomain (PHD) transcription factor with transmembrane domains that functions in multiple retrograde signal pathways. The proteolytic cleavage of PTM occurs in response to retrograde signals and amino-terminal PTM accumulates in the nucleus, where it activates ABI4 transcription in a PHD-dependent manner associated with histone modifications."]
["AT5G44790","RAN1",773.96,-0.3652,0.10369,-3.5222,{"v":4.28E-4,"d":"4.28E-04"},0.0025974,"full_name=RESPONSIVE-TO-ANTAGONIST 1. copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1). ATP dependent copper transporter vital for ethylene response pathway","AT5G19930","PGR",43.17,-1.2172,0.32123,-3.789,{"v":0.000151,"d":"1.51E-04"},{"v":0.000889,"d":"8.89E-04"},"integral membrane protein (Protein of unknown function DUF92, transmembrane).","AT4G26200","ACS7",638,-0.85818,0.19024,-4.5109,{"v":6.45e-06,"d":"6.45E-06"},{"v":3.68E-5,"d":"3.68E-05"},"full_name=1-amino-cyclopropane-1-carboxylate synthase 7. 1-amino-cyclopropane-1-carboxylate synthase 7. Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.","AT2G36320",null,94.441,1.2968,0.25403,5.1048,{"v":3.31e-07,"d":"3.31E-07"},{"v":1.82e-06,"d":"1.82E-06"},"A20/AN1-like zinc finger family protein.","AT4G03320","Tic20-IV",301.59,-0.49952,0.12686,-3.9377,{"v":8.23e-05,"d":"8.23E-05"},{"v":0.000442,"d":"4.42E-04"},"full_name=translocon at the inner envelope membrane of chloroplasts 20-IV. translocon at the inner envelope membrane of chloroplasts 20-IV. Encodes a component of the TIC (translocon at the inner envelope membrane of chloroplasts) protein translocation machinery mediating the protein translocation across the inner envelope of plastids. The Arabidopsis genome encodes four Tic20 homologous proteins, AT1G04940(Tic20-I), AT2G47840(Tic20-II), AT4G03320(Tic20-IV) and AT5G55710(Tic20-V)."]
["AT4G24240","WRKY7",28.354,-1.3567,0.38537,-3.5204,{"v":0.000431,"d":"4.31E-04"},0.00261,"full_name=WRKY DNA-binding protein 7. WRKY DNA-binding protein 7. Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family.","AT2G25210",null,280.74,-0.55848,0.14751,-3.7861,{"v":0.000153,"d":"1.53E-04"},{"v":0.000898,"d":"8.98E-04"},"Ribosomal protein L39 family protein.","AT4G08810","SUB1",112.21,-0.92659,0.20559,-4.507,{"v":6.57e-06,"d":"6.57E-06"},{"v":3.74e-05,"d":"3.74E-05"},"calcium ion binding protein. Calcium binding protein involved in cryptochrome and phytochrome coaction","AT1G33240","GTL1",19.087,-5.9883,1.1737,-5.102,{"v":3.36e-07,"d":"3.36E-07"},{"v":1.85e-06,"d":"1.85E-06"},"full_name=GT-2-like 1. GT-2-like 1. Encodes a plant transcriptional activator that contains two separate, but similar, trihelix DNA-binding domains, similar to GT-2. Gene is expressed in all aerial parts of the plant, with higher level of expression in siliques. At-GTL2 was thought to be a duplicated copy of this gene but is likely to be a cloning artefact, the result of a chimeric clone. Regulates ploidy-dependent cell growth in trichome.","AT4G20890","TUB9",446.16,0.44778,0.11385,3.9332,{"v":8.38e-05,"d":"8.38E-05"},{"v":0.000449,"d":"4.49E-04"},"full_name=tubulin beta-9 chain. tubulin beta-9 chain. tubulin 9"]
["AT5G55896",null,374.2,0.44602,0.12688,3.5152,{"v":0.000439,"d":"4.39E-04"},0.0026562,"transposable_element_gene.","AT5G50680","SAE1B",311.54,0.55098,0.14579,3.7794,{"v":0.000157,"d":"1.57E-04"},{"v":0.00092,"d":"9.20E-04"},"full_name=SUMO activating enzyme 1B. SUMO activating enzyme 1B. Encodes a protein that is part of a heterodimeric SUMO E1 activating enzyme.","AT1G26660",null,130.07,0.85897,0.1907,4.5043,{"v":6.66e-06,"d":"6.66E-06"},{"v":3.78e-05,"d":"3.78E-05"},"Prefoldin chaperone subunit family protein.","AT5G45110","NPR3",114.73,-1.2441,0.244,-5.0985,{"v":3.42e-07,"d":"3.42E-07"},{"v":1.88E-6,"d":"1.88E-06"},"full_name=NPR1-like protein 3. NPR1-like protein 3. Encodes NPR3, a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays. NPR3 and NPR4 are receptors for the immune signal salicylic acid.","AT1G69170","SBP",80.302,-1.0521,0.26763,-3.931,{"v":8.46e-05,"d":"8.46E-05"},{"v":0.000453,"d":"4.53E-04"},"Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein. Encodes SPL6. Required for the resistance mediated by the TIR-NB-LRR RPS4 against Pseudomonas syringae carrying the avrRps4 effector. Transcriptome analysis indicates that SPL6 positively regulates a subset of defense genes."]
["AT1G62290","PASPA2",26920,0.31838,0.09074,3.5087,{"v":0.00045,"d":"4.50E-04"},2.7166E-3,"Saposin-like aspartyl protease family protein.","AT2G16600","ROC3",1083.5,-0.43373,0.11485,-3.7766,{"v":0.000159,"d":"1.59E-04"},{"v":0.000929,"d":"9.29E-04"},"full_name=rotamase CYP 3. rotamase CYP 3. Encodes cytosolic cyclophilin ROC3.","AT3G62650",null,227.38,0.7203,0.16009,4.4993,{"v":6.82e-06,"d":"6.82E-06"},{"v":3.86e-05,"d":"3.86E-05"},"hypothetical protein.","AT3G14060",null,17.405,3.4232,0.67194,5.0944,{"v":3.5e-07,"d":"3.50E-07"},{"v":1.92e-06,"d":"1.92E-06"},"hypothetical protein.","AT3G44260","CAF1a",14.46,-2.4004,0.61123,-3.9271,{"v":8.6e-05,"d":"8.60E-05"},{"v":0.000459,"d":"4.59E-04"},"full_name=CCR4- associated factor 1a. Polynucleotidyl transferase, ribonuclease H-like superfamily protein. Encodes one of the homologs of the yeast CCR4-associated factor 1: AT3G44260 (CAF1a), AT5G22250 (CAF1b). Has mRNA deadenylation activity. Also plays a role in plant defense responses."]
["AT1G49975",null,3.7225,-5.2888,1.5087,-3.5054,{"v":0.000456,"d":"4.56E-04"},0.0027452,"photosystem I reaction center subunit N.","AT1G27980","DPL1",363.91,0.50355,0.13347,3.7726,{"v":0.000162,"d":"1.62E-04"},{"v":0.000942,"d":"9.42E-04"},"full_name=dihydrosphingosine phosphate lyase. dihydrosphingosine phosphate lyase.","AT2G47990","SWA1",131.42,0.95112,0.21169,4.4929,{"v":7.02e-06,"d":"7.02E-06"},{"v":3.97e-05,"d":"3.97E-05"},"full_name=SLOW WALKER1. transducin family protein / WD-40 repeat family protein. Encodes a transducin family nucleolar protein with six WD40 repeats that is most likely involved in 18S rRNA biogenesis. The slow progression of the gametophytic division cycles in swa1 suggested that the SWA1 protein is required for the normal progression of mitotic division cycles through the regulation of cell metabolism. Ubiquitously expressed throughout the plant.","AT3G57000",null,345.39,0.72512,0.14246,5.0902,{"v":3.58E-7,"d":"3.58E-07"},{"v":1.96e-06,"d":"1.96E-06"},"nucleolar essential protein-like protein.","AT4G27250",null,118.07,0.79306,0.20208,3.9245,{"v":8.69e-05,"d":"8.69E-05"},{"v":0.000463,"d":"4.63E-04"},"NAD(P)-binding Rossmann-fold superfamily protein."]
["AT3G59765",null,7.1028,-4.2525,1.2136,-3.504,{"v":0.000458,"d":"4.58E-04"},2.7548E-3,". . Unknown gene","AT5G12370","SEC10",677.85,-0.41245,0.10943,-3.7691,{"v":1.64E-4,"d":"1.64E-04"},{"v":0.000954,"d":"9.54E-04"},"full_name=exocyst complex component sec10. exocyst complex component sec10.","AT4G19710","AK-HSDH II",347.57,0.63534,0.14154,4.4887,{"v":7.17E-6,"d":"7.17E-06"},{"v":4.05e-05,"d":"4.05E-05"},"full_name=aspartate kinase-homoserine dehydrogenase ii. aspartate kinase-homoserine dehydrogenase ii. Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine.","AT5G43310",null,118.71,-1.0685,0.21009,-5.0859,{"v":3.66e-07,"d":"3.66E-07"},{"v":2e-06,"d":"2.00E-06"},"COP1-interacting protein-like protein.","AT5G41040","RWP1",10.542,-3.0472,0.77769,-3.9183,{"v":8.92E-5,"d":"8.92E-05"},{"v":0.000474,"d":"4.74E-04"},"full_name=REDUCED LEVELS OF WALL-BOUND PHENOLICS 1. HXXXD-type acyl-transferase family protein. Encodes a feruloyl-CoA transferase required for suberin synthesis. Has feruloyl-CoA-dependent feruloyl transferase activity towards substrates with a primary alcohol."]
["AT3G61190","BAP1",13.789,-2.1053,0.60163,-3.4993,{"v":0.000467,"d":"4.67E-04"},0.0027994,"full_name=BON association protein 1. BON association protein 1. Encodes a protein with a C2 domain that binds to BON1 in yeast two hybrid analyses. Its ability to bind to phospholipids is enhanced by calcium ions. Involved in maintaining cell homeostasis.","AT5G02560","HTA12",143.25,-0.68195,0.18103,-3.767,{"v":1.65E-4,"d":"1.65E-04"},{"v":0.000961,"d":"9.61E-04"},"full_name=histone H2A 12. histone H2A 12. Encodes HTA12, a histone H2A protein.","AT1G77740","PIP5K2",71.202,-1.1675,0.2603,-4.4854,{"v":7.28e-06,"d":"7.28E-06"},{"v":4.1E-5,"d":"4.10E-05"},"full_name=phosphatidylinositol-4-phosphate 5-kinase 2. phosphatidylinositol-4-phosphate 5-kinase 2. Encodes PIP5K2, a phosphatidylinositol-4-phosphate 5-kinase (PtdIns(4)P 5-kinase 2; or PIP5K2 that is involved in regulating lateral root formation and root gravity response.","AT1G17200","CASPL2A1",10.042,-6.9293,1.3635,-5.0821,{"v":3.73e-07,"d":"3.73E-07"},{"v":2.03E-6,"d":"2.03E-06"},"Uncharacterized protein family (UPF0497).","AT3G26910",null,238.64,0.56605,0.14455,3.916,{"v":9e-05,"d":"9.00E-05"},{"v":0.000478,"d":"4.78E-04"},"hydroxyproline-rich glycoprotein family protein."]
["AT5G66040","STR16",700.12,0.40094,0.11471,3.4952,{"v":0.000474,"d":"4.74E-04"},2.8368E-3,"full_name=sulfurtransferase protein 16. sulfurtransferase protein 16. Encodes a protein with thiosulfate sulfurtransferase/rhodanese activity in vitro, however, it is likely to use a substrate other than thiosulfate or 3-mercaptopyruvate in vivo.","AT4G00480","ATMYC1",30.404,-1.4802,0.39339,-3.7627,{"v":0.000168,"d":"1.68E-04"},{"v":0.000975,"d":"9.75E-04"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein. MYC-related protein with a basic helix-loop-helix motif at the C-terminus and a region similar to the maize B/R family at the N-terminus","AT5G05680","MOS7",72.278,1.1512,0.25691,4.4812,{"v":7.42e-06,"d":"7.42E-06"},{"v":4.17e-05,"d":"4.17E-05"},"full_name=MODIFIER OF SNC1,7. nuclear pore complex protein-like protein. Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs.","AT2G05260",null,38.373,-1.7322,0.3413,-5.0755,{"v":3.87e-07,"d":"3.87E-07"},{"v":2.1e-06,"d":"2.10E-06"},"alpha/beta-Hydrolases superfamily protein.","AT5G40250","ATL46",254.78,0.54576,0.13959,3.9098,{"v":9.24e-05,"d":"9.24E-05"},{"v":0.00049,"d":"4.90E-04"},"RING/U-box superfamily protein."]
["AT1G72770","HAB1",508.56,0.41864,0.11987,3.4925,{"v":0.000479,"d":"4.79E-04"},0.0028612,"full_name=HYPERSENSITIVE TO ABA1. HYPERSENSITIVE TO ABA1. mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid.","AT3G28940",null,793.85,-0.47301,0.12583,-3.7591,{"v":0.000171,"d":"1.71E-04"},{"v":0.000987,"d":"9.87E-04"},"AIG2-like (avirulence induced gene) family protein.","AT3G17430",null,72.741,-1.3233,0.29575,-4.4746,{"v":7.66e-06,"d":"7.66E-06"},{"v":4.3e-05,"d":"4.30E-05"},"Nucleotide-sugar transporter family protein. Nucleotide/sugar transporter family protein","AT3G15850","FAD5",322.42,0.82745,0.16317,5.0712,{"v":3.95e-07,"d":"3.95E-07"},{"v":2.15e-06,"d":"2.15E-06"},"full_name=fatty acid desaturase 5. fatty acid desaturase 5. Chloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor.","AT4G19600","CYCT1;4",389.56,0.46625,0.11939,3.9053,{"v":9.41e-05,"d":"9.41E-05"},{"v":0.000498,"d":"4.98E-04"},"Cyclin family protein. Encodes a cyclin T partner CYCT1;4. Plays important roles in infection with Cauliflower mosaic virus (CaMV)."]
["AT2G32140",null,17.345,-1.9028,0.54582,-3.4861,{"v":0.00049,"d":"4.90E-04"},0.0029241,"transmembrane receptor.","AT2G29660",null,173.47,-0.74249,0.19772,-3.7554,{"v":1.73E-4,"d":"1.73E-04"},0.0010006,"zinc finger (C2H2 type) family protein.","AT1G02850","BGLU11",5517.1,-0.43495,0.097297,-4.4703,{"v":7.81e-06,"d":"7.81E-06"},{"v":4.38e-05,"d":"4.38E-05"},"full_name=beta glucosidase 11. beta glucosidase 11.","AT3G02750",null,402.01,-0.82521,0.16286,-5.067,{"v":4.04e-07,"d":"4.04E-07"},{"v":2.19e-06,"d":"2.19E-06"},"Protein phosphatase 2C family protein.","AT2G05830","MTI1",412.87,-0.44933,0.11534,-3.8957,{"v":9.79e-05,"d":"9.79E-05"},{"v":0.000517,"d":"5.17E-04"},"NagB/RpiA/CoA transferase-like superfamily protein. Encodes a 5-methylthioribose-1-phosphate isomerase."]
["AT5G51430","EYE",432.68,-0.42281,0.12129,-3.4858,{"v":0.000491,"d":"4.91E-04"},0.0029265,"full_name=EMBRYO YELLOW. conserved oligomeric Golgi complex component-related / COG complex component-like protein. Encodes a protein that is homologous to Cog7, a subunit of the conserved oligomeric Golgi (COG) complex, which is required for the normal morphology and function of the Golgi apparatus. It is likely to be involved in transport or retention of Golgi-localized proteins and in maintenance of Golgi morphology.","AT1G23290","RPL27AB",654.04,-0.4341,0.11564,-3.7539,{"v":1.74E-4,"d":"1.74E-04"},0.001006,"Ribosomal protein L18e/L15 superfamily protein. Encodes a ribosomal protein L27A, a constituent of the large subunit of the ribosomal complex. Regulated by TCP20.","AT1G57800","VIM5",35.929,-1.8214,0.40748,-4.47,{"v":7.82e-06,"d":"7.82E-06"},{"v":4.38e-05,"d":"4.38E-05"},"full_name=VARIANT IN METHYLATION 5. zinc finger (C3HC4-type RING finger) family protein. predicted to encode a protein with an N-terminal PHD domain and two RING domains surrounding an SRA domain. Attempts to isolate ORTH3/VIM5 cDNA through RT-PCR were unsuccessful and only one Arabidopsis EST is associated with this locus. A paternally expressed imprinted gene.","AT3G20640",null,16.269,-5.7332,1.1317,-5.0661,{"v":4.06e-07,"d":"4.06E-07"},{"v":2.2e-06,"d":"2.20E-06"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT4G03560","TPC1",827.86,0.35609,0.091441,3.8942,{"v":9.85e-05,"d":"9.85E-05"},{"v":0.00052,"d":"5.20E-04"},"full_name=two-pore channel 1. two-pore channel 1. Encodes a depolarization-activated Ca(2+) channel. Anti-sense experiments with this gene as well as Sucrose-H(+) symporters and complementation of yeast sucrose uptake mutant cch1 suggest that this protein mediates a voltage-activated Ca(2+ )influx. Mutants lack detectable SV channel activity suggesting TPC1 is essential component of the SV channel. Patch clamp analysis of loss of function mutation indicates TPC1 does not affect Ca2+ signaling in response to abiotic and biotic stress."]
["AT3G63340",null,685.05,0.40823,0.11723,3.4823,{"v":0.000497,"d":"4.97E-04"},2.9605E-3,"kinase superfamily protein.","AT5G09990","PROPEP5",24.085,2.0711,0.55234,3.7498,{"v":0.000177,"d":"1.77E-04"},1.021E-3,"full_name=elicitor peptide 5 precursor. elicitor peptide 5 precursor.","AT1G77240","AAE2",32.801,-1.8534,0.41492,-4.467,{"v":7.93e-06,"d":"7.93E-06"},{"v":4.44e-05,"d":"4.44E-05"},"full_name=acyl activating enzyme 2. AMP-dependent synthetase and ligase family protein.","AT5G46420",null,272.83,0.7003,0.13831,5.0633,{"v":4.12e-07,"d":"4.12E-07"},{"v":2.23e-06,"d":"2.23E-06"},"16S rRNA processing protein RimM family.","AT4G12600",null,512.27,0.41705,0.10717,3.8917,{"v":9.96e-05,"d":"9.96E-05"},{"v":0.000525,"d":"5.25E-04"},"Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein."]
["AT5G14120",null,262.22,0.62121,0.17869,3.4764,{"v":0.000508,"d":"5.08E-04"},3.0201E-3,"Major facilitator superfamily protein.","AT1G58350","ZW18",133.88,-0.72355,0.19309,-3.7471,{"v":0.000179,"d":"1.79E-04"},1.0298E-3,"Putative serine esterase family protein.","AT2G34850","MEE25",29.613,-1.8585,0.41661,-4.4609,{"v":8.16e-06,"d":"8.16E-06"},{"v":4.55e-05,"d":"4.55E-05"},"full_name=maternal effect embryo arrest 25. NAD(P)-binding Rossmann-fold superfamily protein.","AT1G66430","FRK3",39.366,-1.8163,0.35921,-5.0565,{"v":4.27E-7,"d":"4.27E-07"},{"v":2.3E-6,"d":"2.30E-06"},"pfkB-like carbohydrate kinase family protein.","AT5G35910","RRP6L2",510.37,0.40903,0.10522,3.8875,{"v":1.01E-4,"d":"1.01E-04"},{"v":0.000533,"d":"5.33E-04"},"Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein."]
["AT3G04730","IAA16",67.665,-0.90515,0.26054,-3.4741,{"v":5.13E-4,"d":"5.13E-04"},0.0030416,"full_name=indoleacetic acid-induced protein 16. indoleacetic acid-induced protein 16. early auxin-induced (IAA16)","AT2G22860","PSK2",21.427,-1.7582,0.46971,-3.7432,{"v":0.000182,"d":"1.82E-04"},1.0444E-3,"full_name=phytosulfokine 2 precursor. phytosulfokine 2 precursor. Phytosulfokine 2 precursor, coding for a unique plant peptide growth factor.","AT5G55200","MGE1",120.23,0.94189,0.21126,4.4584,{"v":8.26e-06,"d":"8.26E-06"},{"v":4.6E-5,"d":"4.60E-05"},"full_name=mitochondrial GrpE 1. Co-chaperone GrpE family protein.","AT3G17250",null,83.854,-1.3228,0.2619,-5.0507,{"v":4.4e-07,"d":"4.40E-07"},{"v":2.37e-06,"d":"2.37E-06"},"Protein phosphatase 2C family protein.","AT2G17520","IRE1A",665.45,0.36148,0.0931,3.8827,{"v":1.03E-4,"d":"1.03E-04"},{"v":0.000542,"d":"5.42E-04"},"Endoribonuclease/protein kinase IRE1-like protein. Encodes a endoribonuclease/protein kinase IRE1-like protein that is predicted to form a type I transmembrane protein structure and contain kinase/endoribonuclease domains at their C-terminal halves. The transcript levels for several ER-stress responsive genes, including six protein disulfide isomerases (PDIs), BiP2, and AtbZIP60 are not affected in ire1-2 null mutants."]
["AT4G32250","KOC1",687.07,0.36607,0.10541,3.4727,{"v":0.000515,"d":"5.15E-04"},0.0030525,"Protein kinase superfamily protein.","AT3G16320","CDC27a",25.025,1.7956,0.4802,3.7394,{"v":1.85E-4,"d":"1.85E-04"},1.0586E-3,"Tetratricopeptide repeat (TPR)-like superfamily protein. Subunit in the anaphase-promoting complex. Role in gametogenesis, control of mitotic progression and cell differentiation during the entire life cycle.","AT3G53230","AtCDC48B",2484.1,0.67129,0.15063,4.4564,{"v":8.33e-06,"d":"8.33E-06"},{"v":4.64e-05,"d":"4.64E-05"},"full_name=cell division cycle 48B. ATPase, AAA-type, CDC48 protein.","AT5G43830",null,15.337,-5.0376,0.99864,-5.0445,{"v":4.55e-07,"d":"4.55E-07"},{"v":2.45e-06,"d":"2.45E-06"},"aluminum induced protein with YGL and LRDR motifs.","AT5G61990",null,136.93,-0.73586,0.18968,-3.8795,{"v":1.05E-4,"d":"1.05E-04"},{"v":0.000549,"d":"5.49E-04"},"Pentatricopeptide repeat (PPR) superfamily protein."]
["AT5G54200","WDD1",118.93,-0.74738,0.21558,-3.4669,{"v":0.000526,"d":"5.26E-04"},0.0031095,"Transducin/WD40 repeat-like superfamily protein.","AT3G16400","NSP1",52.44,-1.0983,0.29444,-3.7302,{"v":0.000191,"d":"1.91E-04"},1.0946E-3,"full_name=nitrile specifier protein 1. nitrile specifier protein 1. Encodes a nitrile-specifier protein NSP1 responsible for constitutive and herbivore-induced simple nitrile formation in rosette leaves. NSP1 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation.","AT3G23340","ckl10",506.79,0.61273,0.13778,4.4471,{"v":8.7e-06,"d":"8.70E-06"},{"v":4.83e-05,"d":"4.83E-05"},"full_name=casein kinase I-like 10. casein kinase I-like 10.","AT5G03560",null,438.18,0.98012,0.19471,5.0338,{"v":4.81e-07,"d":"4.81E-07"},{"v":2.58e-06,"d":"2.58E-06"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT3G06650","ACLB-1",57.36,1.0976,0.2833,3.8745,{"v":1.07E-4,"d":"1.07E-04"},{"v":0.000558,"d":"5.58E-04"},"full_name=ATP-citrate lyase B-1. ATP-citrate lyase B-1. One of the two genes encoding subunit B of the trimeric enzyme ATP Citrate lyase"]
["AT1G77660",null,188.73,-0.55658,0.16069,-3.4636,{"v":0.000533,"d":"5.33E-04"},3.1449E-3,"Histone H3 K4-specific methyltransferase SET7/9 family protein.","AT3G11180","JOX1",109.14,-0.84211,0.22591,-3.7277,{"v":1.93E-4,"d":"1.93E-04"},0.0011047,"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT4G19210","ABCE2",1171,0.43448,0.097803,4.4424,{"v":8.9e-06,"d":"8.90E-06"},{"v":4.93e-05,"d":"4.93E-05"},"full_name=ATP-binding cassette E2. RNAse l inhibitor protein 2. member of RLI subfamily","AT3G27570",null,142.96,-0.99119,0.19703,-5.0306,{"v":4.89E-7,"d":"4.89E-07"},{"v":2.62e-06,"d":"2.62E-06"},"Sucrase/ferredoxin-like family protein.","AT5G26000","TGG1",1164.5,-0.54214,0.13998,-3.873,{"v":1.07E-4,"d":"1.07E-04"},{"v":0.000561,"d":"5.61E-04"},"full_name=thioglucoside glucohydrolase 1. thioglucoside glucohydrolase 1. member of Glycoside Hydrolase Family 1. encodes one of two known functional myrosinase enzymes in Arabidopsis. The enzyme catalyzes the hydrolysis of glucosinolates into compounds that are toxic to various microbes and herbivores."]
["AT1G48860","EPSPS",384.63,-0.44312,0.12809,-3.4595,{"v":0.000541,"d":"5.41E-04"},0.0031869,"RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta.","AT3G05230",null,84.249,-0.85275,0.22903,-3.7234,{"v":0.000197,"d":"1.97E-04"},1.1213E-3,"Signal peptidase subunit.","AT1G44000","SGRL",38.608,-1.6456,0.37065,-4.4397,{"v":9.01e-06,"d":"9.01E-06"},{"v":4.98e-05,"d":"4.98E-05"},"STAY-GREEN-like protein.","AT3G56360",null,114.97,-1.3846,0.27553,-5.0252,{"v":5.03e-07,"d":"5.03E-07"},{"v":2.69e-06,"d":"2.69E-06"},"hypothetical protein.","AT5G63650","SNRK2.5",22.418,-1.8426,0.4761,-3.8703,{"v":0.000109,"d":"1.09E-04"},{"v":0.000566,"d":"5.66E-04"},"full_name=SNF1-related protein kinase 2.5. SNF1-related protein kinase 2.5. encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress."]
["AT3G52820","PAP22",6.7798,4.3154,1.2489,3.4555,{"v":0.000549,"d":"5.49E-04"},3.2299E-3,"full_name=purple acid phosphatase 22. purple acid phosphatase 22.","AT3G24170","GR1",867.35,0.40815,0.10977,3.7181,{"v":0.000201,"d":"2.01E-04"},0.001143,"full_name=glutathione-disulfide reductase. glutathione-disulfide reductase. Encodes a cytosolic glutathione reductase.","AT2G20530","PHB6",281.57,0.6524,0.14714,4.4338,{"v":9.26e-06,"d":"9.26E-06"},{"v":5.11e-05,"d":"5.11E-05"},"full_name=prohibitin 6. prohibitin 6.","AT1G16490","MYB58",14.304,-4.9394,0.98369,-5.0213,{"v":5.13E-7,"d":"5.13E-07"},{"v":2.74E-6,"d":"2.74E-06"},"full_name=myb domain protein 58. myb domain protein 58. Member of the R2R3 factor gene family.","AT4G35100","PIP3",26.862,1.8258,0.47208,3.8676,{"v":1.1E-4,"d":"1.10E-04"},{"v":0.000572,"d":"5.72E-04"},"full_name=plasma membrane intrinsic protein 3. plasma membrane intrinsic protein 3. a member of the plasma membrane intrinsic protein PIP. functions as aquaporin. Salt-stress-inducible MIP"]
["AT1G27910","PUB45",157.13,0.60933,0.1768,3.4465,{"v":0.000568,"d":"5.68E-04"},0.0033334,"full_name=plant U-box 45. plant U-box 45. Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.","AT1G15780","NRB4",409.83,0.448,0.12056,3.7161,{"v":2.02E-4,"d":"2.02E-04"},1.1504E-3,"full_name=Non-Recognition-of-BTH 4. mediator of RNA polymerase II transcription subunit 15a-like protein.","AT2G16580","SAUR8",112.45,-1.194,0.26948,-4.4308,{"v":9.39e-06,"d":"9.39E-06"},{"v":5.18e-05,"d":"5.18E-05"},"SAUR-like auxin-responsive protein family.","AT5G03630","ATMDAR2",20.985,-3.2339,0.6442,-5.0201,{"v":5.17e-07,"d":"5.17E-07"},{"v":2.75e-06,"d":"2.75E-06"},"Pyridine nucleotide-disulfide oxidoreductase family protein.","AT5G03160","P58IPK",51.437,-1.1384,0.29453,-3.8653,{"v":1.11E-4,"d":"1.11E-04"},{"v":0.000576,"d":"5.76E-04"},"full_name=homolog of mamallian P58IPK. DnaJ P58IPK-like protein. J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast."]
["AT4G37910","mtHsc70-1",273.99,0.55918,0.16232,3.4448,{"v":5.71E-4,"d":"5.71E-04"},0.0033477,"full_name=mitochondrial heat shock protein 70-1. mitochondrial heat shock protein 70-1.","AT1G50790",null,53.175,-1.0757,0.28986,-3.7109,{"v":0.000207,"d":"2.07E-04"},0.001172,"Plant mobile domain protein family.","AT4G03320","Tic20-IV",385.09,0.5657,0.12777,4.4274,{"v":9.54e-06,"d":"9.54E-06"},{"v":5.25e-05,"d":"5.25E-05"},"full_name=translocon at the inner envelope membrane of chloroplasts 20-IV. translocon at the inner envelope membrane of chloroplasts 20-IV. Encodes a component of the TIC (translocon at the inner envelope membrane of chloroplasts) protein translocation machinery mediating the protein translocation across the inner envelope of plastids. The Arabidopsis genome encodes four Tic20 homologous proteins, AT1G04940(Tic20-I), AT2G47840(Tic20-II), AT4G03320(Tic20-IV) and AT5G55710(Tic20-V).","AT1G09530","PIF3",266.16,0.78958,0.15744,5.015,{"v":5.3e-07,"d":"5.30E-07"},{"v":2.82e-06,"d":"2.82E-06"},"full_name=phytochrome interacting factor 3. phytochrome interacting factor 3. Transcription factor interacting with photoreceptors phyA and phyB. Forms a ternary complex in vitro with G-box element of the promoters of LHY, CCA1. Acts as a negative regulator of phyB signalling. It degrades rapidly after irradiation of dark grown seedlings in a process controlled by phytochromes. Does not play a significant role in controlling light input and function of the circadian clockwork. Binds to G- and E-boxes, but not to other ACEs. Binds to anthocyanin biosynthetic genes in a light- and HY5-independent fashion. PIF3 function as a transcriptional activator can be functionally and mechanistically separated from its role in repression of PhyB mediated processes.","AT5G26740",null,204.74,0.64827,0.16802,3.8583,{"v":0.000114,"d":"1.14E-04"},{"v":0.000592,"d":"5.92E-04"},"organic solute transporter ostalpha protein (DUF300)."]
["AT3G44460","DPBF2",2508.7,0.4555,0.13234,3.4419,{"v":0.000578,"d":"5.78E-04"},0.0033824,"Basic-leucine zipper (bZIP) transcription factor family protein. basic leucine zipper transcription factor (BZIP67), identical to basic leucine zipper transcription factor GI:18656053 from (Arabidopsis thaliana); identical to cDNA basic leucine zipper transcription factor (atbzip67 gene) GI:18656052. Located in the nucleus and expressed during seed maturation in the cotyledons.","AT4G02500","XT2",966.68,-0.35405,0.095439,-3.7097,{"v":0.000208,"d":"2.08E-04"},1.1769E-3,"full_name=UDP-xylosyltransferase 2. UDP-xylosyltransferase 2. Encodes a protein with xylosyltransferase activity, which is specific for UDP-xylose as donor substrate and for oligosaccharides with a degree of polymerization >4. Although the enzyme utilizes either cellopentaose or cellohexaose, its activity is four-fold higher with cellohexaose as an acceptor compared to cellopentaose. The enzyme is able to add several xylosyl residues to the acceptor forming mono-, di- and trixylosylated polysaccharides.","AT3G22320","NRPB5",607.1,0.50571,0.11424,4.4266,{"v":9.57e-06,"d":"9.57E-06"},{"v":5.26e-05,"d":"5.26E-05"},"Eukaryotic rpb5 RNA polymerase subunit family protein. Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV; homologous to budding yeast RPB5.","AT2G37260","TTG2",15.188,-3.5605,0.71044,-5.0117,{"v":5.4e-07,"d":"5.40E-07"},{"v":2.87e-06,"d":"2.87E-06"},"full_name=TRANSPARENT TESTA GLABRA 2. WRKY family transcription factor family protein. Encodes a protein similar to WRKY transcription factors that is expressed in the seed integument and endosperm. Mutants are defective in proanthocyanidin synthesis and seed mucilate deposition. Seeds are yellow colored. Seed size is also affected; seeds are reduced in size but only when the mutant allele is transmitted through the female parent.Loss of function alleles are associated with a reduction in interploidy lethality.","AT3G23300",null,286.24,0.51712,0.13417,3.8543,{"v":1.16E-4,"d":"1.16E-04"},{"v":0.000601,"d":"6.01E-04"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein."]
["AT3G11590",null,68.083,-0.87573,0.25484,-3.4364,{"v":0.000589,"d":"5.89E-04"},0.0034411,"golgin family A protein.","AT2G19090",null,19.005,-1.9023,0.51374,-3.7028,{"v":2.13E-4,"d":"2.13E-04"},1.2059E-3,"DUF630 family protein (DUF630 and DUF632).","AT4G35580","NTL9",515.13,0.57045,0.12898,4.4229,{"v":9.74e-06,"d":"9.74E-06"},{"v":5.34e-05,"d":"5.34E-05"},"full_name=NAC transcription factor-like 9. NAC transcription factor-like 9. Encodes a calmodulin-binding NAC protein (CBNAC). Contains calmodulin-binding domain in the C-terminus of the protein. Functions as a calmodulin-regulated transcriptional repressor.","AT3G22275","JAZ13",8.9337,-6.7697,1.3533,-5.0023,{"v":5.66e-07,"d":"5.66E-07"},{"v":3e-06,"d":"3.00E-06"},"jasmonate ZIM-domain protein.","AT3G61440","CYSC1",55.16,1.2334,0.32052,3.848,{"v":0.000119,"d":"1.19E-04"},{"v":0.000615,"d":"6.15E-04"},"full_name=cysteine synthase C1. cysteine synthase C1. Encodes a cysteine synthase isomer CysC1. The isomer is however less effective in cysteine biosynthesis. It is involved in beta-cyanoalanine biosynthesis, an intermediate of cyanide detoxification pathway."]
["AT5G24980",null,50.138,1.0531,0.30651,3.4359,{"v":0.000591,"d":"5.91E-04"},0.003446,"transmembrane protein.","AT3G26410","TRM11",67.303,0.97907,0.26453,3.7011,{"v":0.000215,"d":"2.15E-04"},1.2135E-3,"full_name=tRNA modification 11. tRNA modification 11 protein. Encodes a protein involved in modification of nucleosides in tRNA. Mutants have only 7.3% 2-methylguanosine levels of wild type counterparts.","AT4G28770",null,231.16,-0.70274,0.1589,-4.4226,{"v":9.75e-06,"d":"9.75E-06"},{"v":5.34e-05,"d":"5.34E-05"},"Tetraspanin family protein.","AT3G15020","mMDH2",174.5,-0.87638,0.1752,-5.0022,{"v":5.67e-07,"d":"5.67E-07"},{"v":3e-06,"d":"3.00E-06"},"full_name=mitochondrial malate dehydrogenase 2. Lactate/malate dehydrogenase family protein.","AT2G15030",null,84.358,-0.89143,0.23171,-3.8472,{"v":0.000119,"d":"1.19E-04"},{"v":0.000617,"d":"6.17E-04"},"pseudogene."]
["AT1G21320","NSRB",6.7626,-4.2182,1.2293,-3.4314,{"v":0.0006,"d":"6.00E-04"},0.003498,"nucleic acid/nucleotide binding protein.","AT1G14820",null,71.726,-0.91408,0.24718,-3.6981,{"v":0.000217,"d":"2.17E-04"},1.2259E-3,"Sec14p-like phosphatidylinositol transfer family protein.","AT2G37110",null,739.05,0.58643,0.13278,4.4167,{"v":1e-05,"d":"1.00E-05"},{"v":5.48e-05,"d":"5.48E-05"},"PLAC8 family protein.","AT3G22890","APS1",2021.1,-0.69617,0.13933,-4.9967,{"v":5.83e-07,"d":"5.83E-07"},{"v":3.08e-06,"d":"3.08E-06"},"full_name=ATP sulfurylase 1. ATP sulfurylase 1. encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis. It may also participate in selenium metabolism.","AT1G63970","ISPF",264.66,-0.52808,0.13745,-3.8419,{"v":1.22E-4,"d":"1.22E-04"},{"v":6.29E-4,"d":"6.29E-04"},"full_name=isoprenoid F. isoprenoid F. Encodes a protein with 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity. The protein's activity was confirmed by heterologous expression of phenotypic complementation of the E. coli ispF mutant. Plants defective in this gene display an albino lethal phenotype.Homolog of E. coli IspF"]
["AT2G30600",null,841.83,0.40578,0.11842,3.4265,{"v":0.000612,"d":"6.12E-04"},0.0035557,"BTB/POZ domain-containing protein.","AT5G04750",null,471.12,-0.46873,0.12682,-3.6961,{"v":0.000219,"d":"2.19E-04"},0.0012333,"F1F0-ATPase inhibitor protein.","AT3G08620",null,78.901,-1.1719,0.26557,-4.4126,{"v":1.02e-05,"d":"1.02E-05"},{"v":5.58e-05,"d":"5.58E-05"},"RNA-binding KH domain-containing protein.","AT2G45030",null,280.8,0.67842,0.13586,4.9937,{"v":5.92e-07,"d":"5.92E-07"},{"v":3.13e-06,"d":"3.13E-06"},"Translation elongation factor EFG/EF2 protein.","AT1G31485",null,89.216,1.0378,0.27068,3.8341,{"v":1.26E-4,"d":"1.26E-04"},{"v":0.000648,"d":"6.48E-04"},"Natural antisense transcript overlaps with AT1G31490. Potential natural antisense gene, locus overlaps with AT1G31490"]
["AT3G15940",null,347.73,-0.45568,0.13307,-3.4244,{"v":0.000616,"d":"6.16E-04"},0.0035767,"UDP-Glycosyltransferase superfamily protein.","AT3G03530","NPC4",222.01,0.57179,0.15475,3.6949,{"v":0.00022,"d":"2.20E-04"},0.0012372,"full_name=non-specific phospholipase C4. non-specific phospholipase C4. PHOSPHOESTERASE FAMILY PROTEIN, NPC4 is significantly induced upon phosphate starvation and plays an important role in the supply of inorganic phosphate and diacylglycerol from membrane-phospholipids during phosphate deprivation.","AT3G47160",null,358.77,0.62828,0.14253,4.408,{"v":1.04E-5,"d":"1.04E-05"},{"v":5.69e-05,"d":"5.69E-05"},"RING/U-box superfamily protein.","AT4G14330","PAKRP2",48.323,-1.5791,0.31688,-4.9832,{"v":6.25e-07,"d":"6.25E-07"},{"v":3.3e-06,"d":"3.30E-06"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT3G56630","CYP94D2",391.98,-0.4452,0.11621,-3.831,{"v":0.000128,"d":"1.28E-04"},{"v":0.000656,"d":"6.56E-04"},"full_name=cytochrome P450, family 94, subfamily D, polypeptide 2. cytochrome P450, family 94, subfamily D, polypeptide 2. member of CYP94D"]
["AT1G01140","CIPK9",132.86,-0.65982,0.19288,-3.4208,{"v":0.000624,"d":"6.24E-04"},0.003616,"full_name=CBL-interacting protein kinase 9. CBL-interacting protein kinase 9. Encodes a CBL-interacting protein kinase with similarity to SOS2","AT1G71350",null,295.32,0.52419,0.14216,3.6873,{"v":0.000227,"d":"2.27E-04"},0.0012716,"eukaryotic translation initiation factor SUI1 family protein.","AT5G43900","MYA2",732.9,-0.60825,0.13821,-4.4009,{"v":1.08E-5,"d":"1.08E-05"},{"v":5.86e-05,"d":"5.86E-05"},"full_name=myosin 2. myosin 2. Encodes a member of the type XI myosin protein family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. This protein is also involved in root hair growth and organelle trafficking. This protein interacts with RabC2a and RabD1 in a GTP-dependent manner.","AT1G74740","CPK30",133.91,1.0225,0.20545,4.9769,{"v":6.46e-07,"d":"6.46E-07"},{"v":3.4e-06,"d":"3.40E-06"},"full_name=calcium-dependent protein kinase 30. calcium-dependent protein kinase 30. member of Calcium Dependent Protein Kinase","AT2G21770","CESA9",66.866,-1.0073,0.26339,-3.8245,{"v":0.000131,"d":"1.31E-04"},{"v":0.000672,"d":"6.72E-04"},"full_name=cellulose synthase A9. cellulose synthase A9. cellulose synthase, related to CESA6."]
["AT5G38560","PERK8",546.79,0.43707,0.12789,3.4176,{"v":0.000632,"d":"6.32E-04"},3.6538E-3,"full_name=proline-rich extensin-like receptor kinase 8. Protein kinase superfamily protein. Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807).","AT1G03760",null,100.3,0.77939,0.21147,3.6856,{"v":0.000228,"d":"2.28E-04"},1.2783E-3,"Prefoldin chaperone subunit family protein.","AT3G06720","IMPA-1",482.84,0.54673,0.12432,4.3979,{"v":1.09e-05,"d":"1.09E-05"},{"v":5.94E-5,"d":"5.94E-05"},"full_name=importin alpha isoform 1. importin alpha isoform 1. Encodes importin alpha involved in nuclear import. Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.","AT3G48610","NPC6",13.932,-4.9457,0.99489,-4.9711,{"v":6.66e-07,"d":"6.66E-07"},{"v":3.49E-6,"d":"3.49E-06"},"full_name=non-specific phospholipase C6. non-specific phospholipase C6.","AT5G17370",null,138.14,0.70903,0.18555,3.8213,{"v":0.000133,"d":"1.33E-04"},{"v":0.000679,"d":"6.79E-04"},"Transducin/WD40 repeat-like superfamily protein."]
["AT2G44690","ARAC9",85.02,-0.80896,0.23719,-3.4107,{"v":0.000648,"d":"6.48E-04"},0.0037411,"full_name=Arabidopsis RAC-like 9. RAC-like 9. A member of ROP GTPase gene family.","AT5G55540","TRN1",81.49,-0.8777,0.23837,-3.6821,{"v":2.31E-4,"d":"2.31E-04"},0.0012934,"full_name=TORNADO 1. tornado 1. Encodes a large plant-specific protein of unknown function, with conserved domains also found in a variety of signaling proteins, In trn mutants, the leaf venation network had a severely reduced complexity: incomplete loops, no tertiary or quaternary veins, and vascular islands. The leaf laminas were asymmetric and narrow because of a severely reduced cell number. TRN1 is required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway.","AT4G14200",null,16.095,-2.9846,0.6794,-4.393,{"v":1.12e-05,"d":"1.12E-05"},{"v":6.06e-05,"d":"6.06E-05"},"Pentatricopeptide repeat (PPR) superfamily protein.","AT3G02060",null,140.08,0.92263,0.18573,4.9676,{"v":6.78e-07,"d":"6.78E-07"},{"v":3.55e-06,"d":"3.55E-06"},"DEAD/DEAH box helicase.","AT4G29350","PFN2",319.59,0.50349,0.13192,3.8166,{"v":1.35E-4,"d":"1.35E-04"},{"v":0.000691,"d":"6.91E-04"},"full_name=profilin 2. profilin 2. Encodes profilin2, a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Expressed in vegetative organs. The first intron of PRF2 enhances gene expression."]
["AT5G01840","OFP1",36.919,-1.2864,0.37765,-3.4063,{"v":0.000658,"d":"6.58E-04"},0.0037956,"full_name=ovate family protein 1. ovate family protein 1. Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.","AT1G59580","MPK2",101.75,-0.7828,0.21287,-3.6774,{"v":0.000236,"d":"2.36E-04"},1.3158E-3,"full_name=mitogen-activated protein kinase homolog 2. mitogen-activated protein kinase homolog 2. encodes a mitogen-activated kinase involved in innate immunity","AT1G72120","NPF5.14",141.93,0.91601,0.20868,4.3894,{"v":1.14e-05,"d":"1.14E-05"},{"v":6.15e-05,"d":"6.15E-05"},"Major facilitator superfamily protein.","AT3G58610",null,1519.4,0.60328,0.12155,4.9633,{"v":6.93e-07,"d":"6.93E-07"},{"v":3.63E-6,"d":"3.63E-06"},"ketol-acid reductoisomerase.","AT1G19290","TANG2",128.9,-0.70698,0.18551,-3.811,{"v":0.000138,"d":"1.38E-04"},{"v":0.000706,"d":"7.06E-04"},"Pentatricopeptide repeat (PPR) superfamily protein."]
["AT1G73965","CLE13",20.65,1.6198,0.47594,3.4035,{"v":0.000665,"d":"6.65E-04"},0.0038271,"full_name=CLAVATA3/ESR-RELATED 13. CLAVATA3/ESR-RELATED 13. Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can partially replace CLV3 function in vivo.","AT1G62820","CML14",179.85,-0.60848,0.16567,-3.6728,{"v":0.00024,"d":"2.40E-04"},0.0013371,"Calcium-binding EF-hand family protein.","AT1G54960","NP2",42.644,1.5117,0.34462,4.3866,{"v":1.15E-5,"d":"1.15E-05"},{"v":6.22e-05,"d":"6.22E-05"},"full_name=NPK1-related protein kinase 2. NPK1-related protein kinase 2. member of MEKK subfamily","AT5G47680","TRM10",235.44,0.71221,0.14376,4.9542,{"v":7.26e-07,"d":"7.26E-07"},{"v":3.79e-06,"d":"3.79E-06"},"full_name=tRNA modification 10. tRNA (guanine(9)-N1)-methyltransferase-like protein. Encodes a protein involved in modification of nucleosides in tRNA. Mutants have 50% less 1-methylguanosine than wt counterparts.","AT1G11390","ABC1K10A",145.06,0.68018,0.17862,3.808,{"v":0.00014,"d":"1.40E-04"},{"v":0.000713,"d":"7.13E-04"},"Protein kinase superfamily protein."]
["AT5G60600","HDS",911.17,-0.35929,0.10563,-3.4015,{"v":0.00067,"d":"6.70E-04"},0.0038503,"full_name=4-hydroxy-3-methylbut-2-enyl diphosphate synthase. 4-hydroxy-3-methylbut-2-enyl diphosphate synthase. Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2,4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light, the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however, the enzyme requires an electron shuttle: ferredoxin-NADP<sup>+</sup> reductase.","AT1G29000","ATHMP06",13.627,-2.4676,0.67262,-3.6687,{"v":0.000244,"d":"2.44E-04"},1.3567E-3,"Heavy metal transport/detoxification superfamily protein.","AT5G27950",null,33.163,-1.6379,0.37392,-4.3803,{"v":1.19E-5,"d":"1.19E-05"},{"v":6.39e-05,"d":"6.39E-05"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT3G61610",null,36.231,-1.9301,0.38976,-4.9521,{"v":7.34e-07,"d":"7.34E-07"},{"v":3.83e-06,"d":"3.83E-06"},"Galactose mutarotase-like superfamily protein.","AT1G09420","G6PD4",352.55,-0.53546,0.14066,-3.8067,{"v":0.000141,"d":"1.41E-04"},{"v":0.000716,"d":"7.16E-04"},"full_name=glucose-6-phosphate dehydrogenase 4. glucose-6-phosphate dehydrogenase 4. Encodes a protein similar to glucose-6-phosphate dehydrogenase but, based on amino acid differences in the active site and lack of activity, does not encode a functional G6PDH. The amino acid sequence for the consensus sequence of the G6PDH active site (DHYLGKE) differs in three places in this protein. gc exon splice site at 20574 is based on protein alignment, and is not confirmed experimentally."]
["AT1G71865",null,147.64,0.59696,0.17566,3.3984,{"v":6.78E-4,"d":"6.78E-04"},0.0038867,"PyrD.","AT4G21580",null,384.06,0.54022,0.1474,3.6649,{"v":0.000247,"d":"2.47E-04"},1.3748E-3,"oxidoreductase, zinc-binding dehydrogenase family protein.","AT1G15420","PCP1",238.47,0.69564,0.159,4.375,{"v":1.21e-05,"d":"1.21E-05"},{"v":6.54e-05,"d":"6.54E-05"},"WD repeat protein.","AT4G20850","TPP2",5064.1,0.43962,0.088947,4.9426,{"v":7.71e-07,"d":"7.71E-07"},{"v":4.01e-06,"d":"4.01E-06"},"full_name=tripeptidyl peptidase ii. tripeptidyl peptidase ii. Tripeptidyl Peptidase II. Ser protease that assembles into a large oligomeric complex containing two proteins of 153 and 142 kD that are derived from a single TPP2 gene, with the smaller version missing part of the C-terminal end. Not essential, based on the lack of phenotype of a T-DNA disruption mutant.","AT2G21720",null,6713.3,-0.24128,0.063446,-3.8029,{"v":0.000143,"d":"1.43E-04"},{"v":0.000726,"d":"7.26E-04"},"ArgH (DUF639)."]
["AT5G57060",null,88.128,0.77416,0.22832,3.3907,0.00069716,0.0039894,"60S ribosomal L18a-like protein.","AT1G49970","CLPR1",905.63,0.35179,0.096153,3.6586,{"v":0.000254,"d":"2.54E-04"},1.4057E-3,"full_name=CLP protease proteolytic subunit 1. CLP protease proteolytic subunit 1. Encodes a ClpP-related sequence. Though similar to ClpP proteins, this does not contains the highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).","AT1G50660",null,273.85,-0.64441,0.1475,-4.3687,{"v":1.25e-05,"d":"1.25E-05"},{"v":6.72e-05,"d":"6.72E-05"},"actin cytoskeleton-regulatory complex pan-like protein.","AT3G13920","EIF4A1",1602.2,0.80789,0.16377,4.9332,{"v":8.09E-7,"d":"8.09E-07"},{"v":4.2e-06,"d":"4.20E-06"},"full_name=eukaryotic translation initiation factor 4A1. eukaryotic translation initiation factor 4A1. eukaryotic translation initiation factor 4A-1","AT3G56360",null,58.012,-1.1836,0.31182,-3.7957,{"v":1.47E-4,"d":"1.47E-04"},{"v":7.45E-4,"d":"7.45E-04"},"hypothetical protein."]
["AT1G06570","PDS1",496.54,0.4443,0.13115,3.3877,{"v":0.000705,"d":"7.05E-04"},0.0040269,"full_name=phytoene desaturation 1. 4-hydroxyphenylpyruvate dioxygenase. Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants.","AT1G43890","RAB18",759.74,0.40855,0.11176,3.6557,{"v":0.000256,"d":"2.56E-04"},1.4195E-3,"full_name=RAB GTPASE HOMOLOG B18. RAB GTPASE HOMOLOG B18. ras-related small GTPase","AT4G15560","CLA1",55.346,-1.5186,0.34818,-4.3614,{"v":1.29E-5,"d":"1.29E-05"},{"v":6.93e-05,"d":"6.93E-05"},"full_name=CLOROPLASTOS ALTERADOS 1. Deoxyxylulose-5-phosphate synthase. Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis","AT2G41620",null,238.4,0.71802,0.14566,4.9294,{"v":8.25e-07,"d":"8.25E-07"},{"v":4.28e-06,"d":"4.28E-06"},"Nucleoporin interacting component (Nup93/Nic96-like) family protein.","AT1G71200","CITF1",27.963,-1.6467,0.43429,-3.7918,{"v":0.00015,"d":"1.50E-04"},{"v":0.000756,"d":"7.56E-04"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein."]
["AT1G20180",null,9.4619,2.6936,0.79515,3.3875,{"v":0.000705,"d":"7.05E-04"},0.0040286,"transmembrane protein (DUF677).","AT5G56870","BGAL4",160.31,0.75829,0.20749,3.6547,{"v":0.000258,"d":"2.58E-04"},0.0014248,"full_name=beta-galactosidase 4. beta-galactosidase 4.","AT4G03430","EMB2770",719.7,0.50836,0.11658,4.3605,{"v":1.3e-05,"d":"1.30E-05"},{"v":6.96e-05,"d":"6.96E-05"},"full_name=EMBRYO DEFECTIVE 2770. pre-mRNA splicing factor-like protein. Encodes a nuclear protein similar to the human U5 small ribonucleoprotein-associated 102-kD protein and to the yeast pre-mRNA splicing factors Prp1p and Prp6p. STA1 expression is upregulated by cold stress, and the sta1-1 mutant is defective in the splicing of the cold-induced COR15A gene. Luciferase imaging was used to isolate a recessive mutant, sta1-1, with enhanced stability of the normally unstable luciferase transcript. This mutation also causes the stabilization of some endogenous gene transcripts and has a range of developmental and stress response phenotypes.","AT1G07180","NDA1",311.53,0.86469,0.17543,4.9291,{"v":8.26e-07,"d":"8.26E-07"},{"v":4.28e-06,"d":"4.28E-06"},"full_name=alternative NAD(P)H dehydrogenase 1. alternative NAD(P)H dehydrogenase 1. Internal NAD(P)H dehydrogenase in mitochondria. The predicted protein sequence has high homology with other designated NAD(P)H DHs from microorganisms; the capacity for matrix NAD(P)H oxidation via the rotenone-insensitive pathway is significantly reduced in the Atndi1 mutant plant line; the in vitro translation product of AtNDI1 is imported into isolated mitochondria and located on the inside of the inner membrane.","AT3G51730",null,311.54,-0.50375,0.13287,-3.7914,{"v":0.00015,"d":"1.50E-04"},{"v":0.000757,"d":"7.57E-04"},"saposin B domain-containing protein."]
["AT1G68990","MGP3",56.842,1.036,0.30641,3.3812,{"v":0.000722,"d":"7.22E-04"},0.004115,"full_name=male gametophyte defective 3. male gametophyte defective 3. MGP3 (male gametophyte-defective 3) belongs to a small family of nuclear-encoded Phage type RNA polymerases (RPOTs) involved in the transcription of mitochondrial genes in Arabidopsis thaliana. Mutation in MGP 3 significantly retarded pollen tube growth and caused defective embryo development.","AT4G35410",null,68.808,-0.93992,0.25745,-3.6508,{"v":2.61E-4,"d":"2.61E-04"},0.0014439,"Clathrin adaptor complex small chain family protein.","AT1G71360","SUN4",88.402,0.96728,0.222,4.3571,{"v":1.32e-05,"d":"1.32E-05"},{"v":7.06e-05,"d":"7.06E-05"},"Galactose-binding protein. Encodes a member of the mid-SUN subfamily of SUN-domain proteins that is localized to both the nuclear envelope and the ER. It is involved in early seed development and nuclear morphology.","AT3G18950","AIW1",19.017,-2.6259,0.53305,-4.9261,{"v":8.39e-07,"d":"8.39E-07"},{"v":4.34E-6,"d":"4.34E-06"},"Transducin/WD40 repeat-like superfamily protein.","AT3G07680","p24beta2",495.33,-0.41125,0.10852,-3.7898,{"v":0.000151,"d":"1.51E-04"},{"v":0.000761,"d":"7.61E-04"},"full_name=p24 subfamily beta 2. emp24/gp25L/p24 family/GOLD family protein. Encodes an Golgi-localized p24 protein. Interacts with p24delta5 at ER export sites for ER exit and coupled transport to the Golgi apparatus."]
["AT5G20420","CHR42",324.47,-0.5326,0.15799,-3.371,{"v":0.000749,"d":"7.49E-04"},0.0042633,"full_name=chromatin remodeling 42. chromatin remodeling 42.","AT1G70320","UPL2",2125.1,0.33002,0.090456,3.6484,{"v":0.000264,"d":"2.64E-04"},1.4547E-3,"full_name=ubiquitin-protein ligase 2. ubiquitin-protein ligase 2. encodes a ubiquitin-protein ligase-like protein containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.","AT1G24170","LGT9",21.258,-2.2213,0.51017,-4.354,{"v":1.34E-5,"d":"1.34E-05"},{"v":7.14e-05,"d":"7.14E-05"},"Nucleotide-diphospho-sugar transferases superfamily protein. Encodes a protein with putative galacturonosyltransferase activity.","AT1G62750","SCO1",138.2,0.97726,0.19857,4.9214,{"v":8.59e-07,"d":"8.59E-07"},{"v":4.44e-06,"d":"4.44E-06"},"full_name=SNOWY COTYLEDON 1. Translation elongation factor EFG/EF2 protein. Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants.","AT4G16141","GATA17L",33.673,1.5264,0.40351,3.7828,{"v":1.55E-4,"d":"1.55E-04"},{"v":0.000781,"d":"7.81E-04"},"GATA type zinc finger transcription factor family protein."]
["AT5G41800",null,142.98,0.72241,0.21465,3.3655,{"v":0.000764,"d":"7.64E-04"},0.0043353,"Transmembrane amino acid transporter family protein.","AT2G20320",null,250.62,0.53143,0.14597,3.6406,{"v":2.72E-4,"d":"2.72E-04"},0.0014956,"DENN (AEX-3) domain-containing protein.","AT2G16280","KCS9",648.87,0.75172,0.17288,4.3481,{"v":1.37e-05,"d":"1.37E-05"},{"v":7.32e-05,"d":"7.32E-05"},"full_name=3-ketoacyl-CoA synthase 9. 3-ketoacyl-CoA synthase 9. Encodes KCS9, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT5G11160","APT5",16.758,-4.7113,0.95922,-4.9117,{"v":9.03e-07,"d":"9.03E-07"},{"v":4.65e-06,"d":"4.65E-06"},"full_name=adenine phosphoribosyltransferase 5. adenine phosphoribosyltransferase 5.","AT1G22370","UGT85A5",517.56,-0.51251,0.13579,-3.7741,{"v":0.000161,"d":"1.61E-04"},{"v":0.000806,"d":"8.06E-04"},"full_name=UDP-glucosyl transferase 85A5. UDP-glucosyl transferase 85A5."]
["AT1G75540","BBX21",395.08,0.44103,0.13105,3.3654,{"v":0.000764,"d":"7.64E-04"},0.0043353,"full_name=B-box domain protein 21. salt tolerance homolog2. Encodes a B-box zinc finger transcription factor BBX21 (also named STH2/salt tolerance homolog2 and LHUS/long hypocotyl under shade). Interacts with COP1 to control de-etiolation. Also genetically interacts with COP1 to regulate shade avoidance.","AT2G37790","AKR4C10",51.078,-1.1044,0.30351,-3.6389,{"v":0.000274,"d":"2.74E-04"},1.5042E-3,"full_name=Aldo-keto reductase family 4 member C10. NAD(P)-linked oxidoreductase superfamily protein.","AT5G03730","CTR1",655.73,0.58111,0.1337,4.3464,{"v":1.38E-5,"d":"1.38E-05"},{"v":7.37e-05,"d":"7.37E-05"},"full_name=CONSTITUTIVE TRIPLE RESPONSE 1. Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed.","AT1G12410","CLP2",452.5,0.56434,0.11494,4.91,{"v":9.11e-07,"d":"9.11E-07"},{"v":4.69E-6,"d":"4.69E-06"},"full_name=CLP protease proteolytic subunit 2. CLP protease proteolytic subunit 2. Encodes a ClpP-related sequence. Though similar to ClpP proteins, this does not contains the highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).","AT1G63290",null,193.57,-0.60359,0.16,-3.7725,{"v":0.000162,"d":"1.62E-04"},{"v":0.000811,"d":"8.11E-04"},"Aldolase-type TIM barrel family protein."]
["AT5G53320",null,9.9734,-2.6028,0.77424,-3.3617,{"v":0.000775,"d":"7.75E-04"},0.0043852,"Leucine-rich repeat protein kinase family protein.","AT5G27350","SFP1",85.265,1.0088,0.27774,3.632,{"v":2.81E-4,"d":"2.81E-04"},0.0015422,"Major facilitator superfamily protein. Encodes a sugar-porter family protein that is induced during leaf senescence. The increase in its gene expression during leaf senescence is paralleled by an accumulation of monosaccharides.","AT1G08320","TGA9",137.54,-0.85221,0.19629,-4.3416,{"v":1.41e-05,"d":"1.41E-05"},{"v":7.52e-05,"d":"7.52E-05"},"full_name=TGACG (TGA) motif-binding protein 9. bZIP transcription factor family protein.","AT3G44190",null,99.497,-1.1487,0.23401,-4.9087,{"v":9.17e-07,"d":"9.17E-07"},{"v":4.71e-06,"d":"4.71E-06"},"FAD/NAD(P)-binding oxidoreductase family protein.","AT2G35640",null,12.301,3.0296,0.80355,3.7703,{"v":1.63E-4,"d":"1.63E-04"},{"v":0.000817,"d":"8.17E-04"},"Homeodomain-like superfamily protein."]
["AT2G37180","RD28",124.49,-0.74581,0.22205,-3.3587,{"v":0.000783,"d":"7.83E-04"},0.0044257,"full_name=RESPONSIVE TO DESICCATION 28. Aquaporin-like superfamily protein. a member of the plasma membrane intrinsic protein PIP2. functions as aquaporin and is involved in dessication.","AT1G58400",null,49.443,1.0994,0.30287,3.6298,{"v":0.000284,"d":"2.84E-04"},0.0015529,"Disease resistance protein (CC-NBS-LRR class) family.","AT1G69760",null,107.1,1.2555,0.28927,4.3402,{"v":1.42E-5,"d":"1.42E-05"},{"v":7.56e-05,"d":"7.56E-05"},"suppressor SRP40-like protein.","AT4G26582",null,65.755,1.3782,0.28093,4.9057,{"v":9.31e-07,"d":"9.31E-07"},{"v":4.78E-6,"d":"4.78E-06"},"Natural antisense transcript overlaps with AT4G26590. Potential natural antisense gene, locus overlaps with AT4G26590 Natural antisense transcript overlaps with AT4G26590","AT2G35300","LEA18",16230,-0.42535,0.11298,-3.7647,{"v":0.000167,"d":"1.67E-04"},{"v":8.34E-4,"d":"8.34E-04"},"full_name=late embryogenesis abundant 18. Late embryogenesis abundant protein, group 1 protein. Encodes LEA4-2/LEA18, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment."]
["AT4G13100",null,70.197,-0.82157,0.24487,-3.3551,{"v":0.000793,"d":"7.93E-04"},0.0044778,"RING/U-box superfamily protein.","AT1G34030",null,636.47,-0.44447,0.12256,-3.6267,{"v":0.000287,"d":"2.87E-04"},0.0015694,"Ribosomal protein S13/S18 family.","AT2G21520",null,523.08,-0.5136,0.11837,-4.339,{"v":1.43E-5,"d":"1.43E-05"},{"v":7.59e-05,"d":"7.59E-05"},"Sec14p-like phosphatidylinositol transfer family protein.","AT5G17580",null,266.78,0.75269,0.15367,4.8982,{"v":9.67e-07,"d":"9.67E-07"},{"v":4.96e-06,"d":"4.96E-06"},"Phototropic-responsive NPH3 family protein.","AT1G17830",null,24.301,2.51,0.66744,3.7606,{"v":0.00017,"d":"1.70E-04"},{"v":0.000847,"d":"8.47E-04"},"hypothetical protein (DUF789)."]
["AT5G54130",null,69.405,-1.064,0.31738,-3.3526,{"v":0.000801,"d":"8.01E-04"},0.0045089,"Calcium-binding endonuclease/exonuclease/phosphatase family.","AT4G10960","UGE5",62.005,0.97341,0.2687,3.6226,{"v":2.92E-4,"d":"2.92E-04"},0.0015913,"full_name=UDP-D-glucose/UDP-D-galactose 4-epimerase 5. UDP-D-glucose/UDP-D-galactose 4-epimerase 5. Encodes a protein with UDP-D-glucose 4-epimerase activity.","AT5G41170",null,63.86,1.174,0.27107,4.3311,{"v":1.48e-05,"d":"1.48E-05"},{"v":7.85e-05,"d":"7.85E-05"},"Pentatricopeptide repeat (PPR-like) superfamily protein.","AT4G10840","KLCR1",100.99,-1.0693,0.21841,-4.8959,{"v":9.78E-7,"d":"9.78E-07"},{"v":5e-06,"d":"5.00E-06"},"full_name=kinesin light chain-related 1. Tetratricopeptide repeat (TPR)-like superfamily protein.","AT5G16300","COG1",238.74,0.57514,0.15315,3.7554,{"v":1.73E-4,"d":"1.73E-04"},{"v":0.000862,"d":"8.62E-04"},"Vps51/Vps67 family (components of vesicular transport) protein."]
["AT2G41210","PIP5K5",68.206,0.84237,0.25134,3.3515,{"v":0.000804,"d":"8.04E-04"},0.0045237,"full_name=phosphatidylinositol- 4-phosphate 5-kinase 5. phosphatidylinositol- 4-phosphate 5-kinase 5. Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology.","AT1G06110","SKIP16",368.84,0.48755,0.13476,3.618,{"v":0.000297,"d":"2.97E-04"},1.6182E-3,"full_name=SKP1/ASK-interacting protein 16. SKP1/ASK-interacting protein 16.","AT2G46750","GulLO2",191.71,-0.95388,0.22029,-4.3301,{"v":1.49E-5,"d":"1.49E-05"},{"v":7.88e-05,"d":"7.88E-05"},"full_name=L -gulono-1,4-lactone ( L -GulL) oxidase 2. D-arabinono-1,4-lactone oxidase family protein. Encodes a homolog of rat L-gulono-1,4-lactone (L-GulL) oxidase that is involved in the biosynthesis of L-ascorbic acid.","AT3G16230",null,349.05,0.59402,0.12139,4.8933,{"v":9.91e-07,"d":"9.91E-07"},{"v":5.06e-06,"d":"5.06E-06"},"Putative eukaryotic LigT.","AT2G41800","TEB",4.8364,5.5644,1.4826,3.7533,{"v":1.75E-4,"d":"1.75E-04"},{"v":0.000869,"d":"8.69E-04"},"imidazolonepropionase (Protein of unknown function, DUF642)."]
["AT1G32470",null,52.923,-3.5586,1.0649,-3.3418,{"v":0.000832,"d":"8.32E-04"},0.0046713,"Single hybrid motif superfamily protein.","AT1G57590","PAE2",15.037,-2.4837,0.68832,-3.6084,{"v":0.000308,"d":"3.08E-04"},0.001675,"Pectinacetylesterase family protein.","AT5G15050","GLCAT14B",14.611,-2.7567,0.63773,-4.3226,{"v":1.54e-05,"d":"1.54E-05"},{"v":8.13e-05,"d":"8.13E-05"},"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein. Encodes GlcAT14B. Has glucuronosyltransferase activity adding glucuronic acid residues to beta-1,3- and beta-1,6-linked galactans.","AT5G35960",null,199.02,-1.0556,0.21596,-4.8876,{"v":1.02E-6,"d":"1.02E-06"},{"v":5.2e-06,"d":"5.20E-06"},"Protein kinase family protein.","AT4G02360",null,46.709,-1.1692,0.31206,-3.7467,{"v":0.000179,"d":"1.79E-04"},{"v":0.00089,"d":"8.90E-04"},"transmembrane protein, putative (Protein of unknown function, DUF538)."]
["AT1G09010",null,698.5,-0.35002,0.10483,-3.3389,{"v":0.000841,"d":"8.41E-04"},0.0047133,"glycoside hydrolase family 2 protein.","AT4G37740","GRF2",81.683,-0.87711,0.24338,-3.6039,{"v":0.000313,"d":"3.13E-04"},0.0017015,"full_name=growth-regulating factor 2. growth-regulating factor 2. Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower","AT1G18360","MAGL2",149.12,-0.77117,0.17858,-4.3183,{"v":1.57e-05,"d":"1.57E-05"},{"v":8.28e-05,"d":"8.28E-05"},"alpha/beta-Hydrolases superfamily protein.","AT5G51330","SWI1",16.085,-3.4996,0.71669,-4.883,{"v":1.05e-06,"d":"1.05E-06"},{"v":5.32e-06,"d":"5.32E-06"},"full_name=SWITCH1. SWITCH1. Encodes novel protein involved in sister chromatid cohesion and meiotic chromosome organization during both male and female meiosis. Gene has two alternate transcripts which produce two similar proteins, one 57 aa shorter than the other.","AT1G20180",null,9.5381,-3.1949,0.85339,-3.7437,{"v":0.000181,"d":"1.81E-04"},{"v":0.000899,"d":"8.99E-04"},"transmembrane protein (DUF677)."]
["AT2G36000","EMB3114",84.93,-0.77311,0.23173,-3.3362,{"v":0.000849,"d":"8.49E-04"},0.0047506,"full_name=EMBRYO DEFECTIVE 3114. Mitochondrial transcription termination factor family protein.","AT1G07320","RPL4",94.128,-0.78668,0.21853,-3.5999,{"v":0.000318,"d":"3.18E-04"},0.0017248,"full_name=ribosomal protein L4. ribosomal protein L4. encodes a plastid ribosomal protein L4","AT3G07910",null,182.24,0.78583,0.1821,4.3153,{"v":1.59E-5,"d":"1.59E-05"},{"v":8.37e-05,"d":"8.37E-05"},"reactive oxygen species modulator-like protein.","AT5G47870","RAD52-2",295.46,-0.74645,0.15298,-4.8793,{"v":1.06E-6,"d":"1.06E-06"},{"v":5.41e-06,"d":"5.41E-06"},"full_name=radiation sensitive 51-2. cobalt ion-binding protein.","AT4G39910","UBP3",437.5,0.42905,0.11464,3.7426,{"v":0.000182,"d":"1.82E-04"},{"v":9.01E-4,"d":"9.01E-04"},"full_name=ubiquitin-specific protease 3. ubiquitin-specific protease 3. Encodes a nuclear ubiquitin-specific protease."]
["AT3G47010",null,49.387,-0.9719,0.29135,-3.3359,{"v":0.00085,"d":"8.50E-04"},0.0047535,"Glycosyl hydrolase family protein.","AT3G18145",null,4.0294,-5.4101,1.5029,-3.5999,{"v":0.000318,"d":"3.18E-04"},0.0017248,"pseudogene.","AT3G17310","DRM3",263.44,-0.63941,0.14823,-4.3138,{"v":1.6e-05,"d":"1.60E-05"},{"v":8.43e-05,"d":"8.43E-05"},"full_name=domains rearranged methyltransferase 3. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. Encodes DRM3 (Domains Rearranged Methyltransferase3), a catalytically mutated paralog of the cytosine methyltransferase DRM2. Despite being catalytically mutated, DRM3 is required for normal maintenance of non-CG DNA methylation, establishment of RNA-directed DNA methylation triggered by repeat sequences and accumulation of repeat-associated small RNAs.","AT1G55110","IDD7",800.76,-0.50477,0.10347,-4.8784,{"v":1.07e-06,"d":"1.07E-06"},{"v":5.43e-06,"d":"5.43E-06"},"full_name=indeterminate(ID)-domain 7. indeterminate(ID)-domain 7.","AT3G04170",null,9.675,-4.1715,1.1149,-3.7416,{"v":1.83E-4,"d":"1.83E-04"},{"v":0.000905,"d":"9.05E-04"},"RmlC-like cupins superfamily protein."]
["AT1G79870","HPPR2",293.53,-0.51107,0.15324,-3.335,{"v":0.000853,"d":"8.53E-04"},0.0047618,"D-isomer specific 2-hydroxyacid dehydrogenase family protein.","AT3G27120","FIGL1",35.214,1.2788,0.35573,3.5949,{"v":0.000325,"d":"3.25E-04"},1.7549E-3,"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT3G14720","MPK19",338.76,-0.56639,0.13148,-4.3078,{"v":1.65e-05,"d":"1.65E-05"},{"v":8.65e-05,"d":"8.65E-05"},"full_name=MAP kinase 19. MAP kinase 19. member of MAP Kinase","AT1G29640",null,8.113,-6.6273,1.3613,-4.8685,{"v":1.12e-06,"d":"1.12E-06"},{"v":5.7e-06,"d":"5.70E-06"},"senescence regulator (Protein of unknown function, DUF584).","AT3G05385",null,9.7311,-3.0425,0.81482,-3.734,{"v":0.000188,"d":"1.88E-04"},{"v":0.000931,"d":"9.31E-04"}]
["AT3G14000","ATBRXL2",347.15,-0.51612,0.15492,-3.3314,{"v":0.000864,"d":"8.64E-04"},0.0048154,"DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein. Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.","AT5G09670",null,334.66,-0.47879,0.13326,-3.5928,{"v":0.000327,"d":"3.27E-04"},0.0017659,"loricrin-like protein.","AT1G67720",null,82.423,-1.0616,0.24662,-4.3046,{"v":1.67e-05,"d":"1.67E-05"},{"v":8.76e-05,"d":"8.76E-05"},"Leucine-rich repeat protein kinase family protein.","AT2G26910","ABCG32",24.236,-3.0523,0.62726,-4.866,{"v":1.14e-06,"d":"1.14E-06"},{"v":5.76e-06,"d":"5.76E-06"},"full_name=ATP-binding cassette G32. pleiotropic drug resistance 4. Encodes a member of the PLEIOTROPIC DRUG RESISTANCE family of ATP binding cassette transporters. Required for the formation of a functional cuticle.","AT2G43580",null,413.94,-0.50743,0.13599,-3.7314,{"v":0.00019,"d":"1.90E-04"},{"v":0.000939,"d":"9.39E-04"},"Chitinase family protein."]
["AT4G02290","GH9B13",7.5653,-3.7793,1.1361,-3.3267,{"v":0.000879,"d":"8.79E-04"},0.0048886,"full_name=glycosyl hydrolase 9B13. glycosyl hydrolase 9B13.","AT1G62300","WRKY6",58.388,1.0429,0.29057,3.5893,{"v":0.000332,"d":"3.32E-04"},0.0017869,"WRKY family transcription factor. Encodes a transcription factor WRKY6. Regulates Phosphate1 (Pho1) expression in response to low phosphate (Pi) stress.","AT1G56330","SAR1B",231.5,-0.85192,0.19812,-4.3,{"v":1.71e-05,"d":"1.71E-05"},{"v":8.92E-5,"d":"8.92E-05"},"full_name=secretion-associated RAS 1B. secretion-associated RAS 1B. Encodes a small GTP-binding protein implicated in ER to cis-Golgi transport of other proteins. A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. The protein is found associated to the ER and free in the cytosol.","AT3G07770","Hsp89.1",920.11,0.46501,0.095771,4.8554,{"v":1.2e-06,"d":"1.20E-06"},{"v":6.07e-06,"d":"6.07E-06"},"full_name=HEAT SHOCK PROTEIN 89.1. HEAT SHOCK PROTEIN 89.1.","AT3G06530",null,696.55,0.37447,0.10052,3.7252,{"v":1.95E-4,"d":"1.95E-04"},{"v":0.000961,"d":"9.61E-04"},"ARM repeat superfamily protein."]
["AT4G31520",null,6.6292,-4.1495,1.2478,-3.3254,{"v":8.83E-4,"d":"8.83E-04"},0.0049036,"SDA1 family protein.","AT5G20320","DCL4",192.97,-0.58299,0.16251,-3.5873,{"v":0.000334,"d":"3.34E-04"},0.0017975,"full_name=dicer-like 4. dicer-like 4. Encodes an RNase III-like enzyme that catalyzes processing of trans-acting small interfering RNA precursors in a distinct small RNA biogenesis pathway. The protein is also involved in the production of 21-nt primary siRNAs from both inverted-repeat constructs and endogenous sequences, as well as the RDR6-dependent 21-nt secondary siRNAs involved in long-range cell-to-cell signaling. It binds DRB4, a ds-RNA binding protein.","AT2G01770","VIT1",111.7,-0.9165,0.21329,-4.2969,{"v":1.73E-5,"d":"1.73E-05"},{"v":9.04e-05,"d":"9.04E-05"},"full_name=vacuolar iron transporter 1. vacuolar iron transporter 1. Encodes an iron transporter required for iron sequestration into vacuoles. Expressed in developing embryo and seed. Localized in the vacuolar membrane.","AT1G07473",null,326.44,-0.70676,0.14563,-4.8531,{"v":1.22E-6,"d":"1.22E-06"},{"v":6.13e-06,"d":"6.13E-06"},"hypothetical protein.","AT5G19080","LUL3",120.57,0.76869,0.20669,3.7191,0.00019994,{"v":0.000983,"d":"9.83E-04"},"full_name=LOG2-LIKE UBIQUITIN LIGASE3. RING/U-box superfamily protein. Paralog of LOG2 (At3g09770), a ubiquitin ligase that regulates amino acid export."]
["AT5G26667","PYR6",263.78,-0.47791,0.14399,-3.3191,{"v":0.000903,"d":"9.03E-04"},0.0050074,"P-loop containing nucleoside triphosphate hydrolases superfamily protein. encodes a uridine 5'-monophosphate (UMP)/cytidine 5'-monophosphate (CMP) kinase.","AT2G02480","STI",46.249,-1.1586,0.32321,-3.5846,{"v":0.000338,"d":"3.38E-04"},0.0018129,"full_name=STICHEL. AAA-type ATPase family protein. STICHEL mutant shows trichomes with fewer than normal branches.","AT4G37680","HHP4",157.58,-0.7853,0.18291,-4.2934,{"v":1.76e-05,"d":"1.76E-05"},{"v":9.16e-05,"d":"9.16E-05"},"full_name=heptahelical protein 4. heptahelical protein 4. heptahelical transmembrane protein HHP4","AT4G20230","TPS30",8.0483,-6.6182,1.3647,-4.8497,{"v":1.24E-6,"d":"1.24E-06"},{"v":6.22e-06,"d":"6.22E-06"},"terpenoid synthase superfamily protein.","AT1G47900",null,94.376,-0.82929,0.22341,-3.712,{"v":0.000206,"d":"2.06E-04"},0.0010086,"filament-like protein (DUF869)."]
["AT3G49470","NACA2",173.68,-0.5481,0.16535,-3.3148,{"v":0.000917,"d":"9.17E-04"},0.0050773,"full_name=nascent polypeptide-associated complex subunit alpha-like protein 2. nascent polypeptide-associated complex subunit alpha-like protein 2.","AT2G36850","GSL8",1057.5,0.3283,0.091656,3.5819,{"v":0.000341,"d":"3.41E-04"},0.001829,"full_name=glucan synthase-like 8. glucan synthase-like 8. Encodes GSL8, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL8 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. Also refer to GSL10 (At3g07160).","AT2G26990","FUS12",389.22,0.59461,0.13857,4.2911,{"v":1.78e-05,"d":"1.78E-05"},{"v":9.24e-05,"d":"9.24E-05"},"full_name=FUSCA 12. proteasome family protein. Represses photomorphogenesis and induces skotomorphogenesis in the dark.","AT1G47970",null,1733.9,0.54608,0.11268,4.8463,{"v":1.26E-6,"d":"1.26E-06"},{"v":6.32e-06,"d":"6.32E-06"},"nucleolin.","AT3G03940","PPK3",357.37,0.45576,0.12284,3.7102,{"v":0.000207,"d":"2.07E-04"},0.0010143,"Protein kinase family protein."]
["AT1G01340","CNGC10",8.452,-2.8824,0.87052,-3.3111,{"v":0.000929,"d":"9.29E-04"},0.0051356,"full_name=cyclic nucleotide gated channel 10. cyclic nucleotide gated channel 10. member of Cyclic nucleotide gated channel family","AT1G17850",null,30.191,-1.379,0.38524,-3.5797,{"v":0.000344,"d":"3.44E-04"},0.001842,"Rhodanese/Cell cycle control phosphatase superfamily protein.","AT1G07310",null,502.1,0.52863,0.12325,4.289,{"v":1.79e-05,"d":"1.79E-05"},{"v":9.32e-05,"d":"9.32E-05"},"Calcium-dependent lipid-binding (CaLB domain) family protein.","AT1G21065",null,636.55,0.56856,0.11749,4.8394,{"v":1.3E-6,"d":"1.30E-06"},{"v":6.54e-06,"d":"6.54E-06"},"secondary thiamine-phosphate synthase enzyme.","AT2G37230","RPPR5",242.93,0.55356,0.14931,3.7074,{"v":0.000209,"d":"2.09E-04"},1.0241E-3,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT1G64720","CP5",672.27,-1.5146,0.45785,-3.3081,{"v":0.000939,"d":"9.39E-04"},0.0051816,"Polyketide cyclase/dehydrase and lipid transport superfamily protein. membrane related protein CP5","AT5G16370","AAE5",413.73,-0.52969,0.14808,-3.5771,{"v":0.000347,"d":"3.47E-04"},0.001857,"full_name=acyl activating enzyme 5. acyl activating enzyme 5.","AT2G25790","SKM1",96.819,-0.9712,0.22678,-4.2826,{"v":1.85e-05,"d":"1.85E-05"},{"v":9.57e-05,"d":"9.57E-05"},"Leucine-rich receptor-like protein kinase family protein.","AT1G13960","WRKY4",767.86,0.57738,0.11939,4.836,{"v":1.32e-06,"d":"1.32E-06"},{"v":6.64E-6,"d":"6.64E-06"},"full_name=WRKY DNA-binding protein 4. WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4).","AT4G22755",null,151.24,-0.70438,0.19033,-3.7009,{"v":0.000215,"d":"2.15E-04"},0.0010488,"methylsterol monooxygenase 1-3."]
["AT2G33400",null,10.851,-2.2325,0.67513,-3.3068,{"v":0.000944,"d":"9.44E-04"},0.0052037,"FK506-binding nuclear-like protein.","AT2G30170","PBCP",55.857,-1.1165,0.31216,-3.5766,{"v":3.48E-4,"d":"3.48E-04"},1.8594E-3,"full_name=PHOTOSYSTEM II CORE PHOSPHATASE. Protein phosphatase 2C family protein. Encodes a chloroplast PP2C phosphatase that is required for efficient dephosphorylation of PSII proteins and involved in light acclimation.","AT2G45620","URT1",538.1,0.58442,0.13652,4.281,{"v":1.86e-05,"d":"1.86E-05"},{"v":9.64e-05,"d":"9.64E-05"},"Nucleotidyltransferase family protein.","AT2G40020",null,71.821,1.2928,0.26739,4.8348,{"v":1.33E-6,"d":"1.33E-06"},{"v":6.67e-06,"d":"6.67E-06"},"Nucleolar histone methyltransferase-related protein.","AT5G07090",null,1146.4,0.31837,0.086056,3.6995,{"v":0.000216,"d":"2.16E-04"},0.0010533,"Ribosomal protein S4 (RPS4A) family protein."]
["AT4G39363",null,14.296,2.0046,0.60762,3.2991,{"v":0.00097,"d":"9.70E-04"},0.0053321,"snoRNA.","AT3G20200",null,73.644,-0.88229,0.24697,-3.5725,{"v":0.000354,"d":"3.54E-04"},0.0018829,"kinase with adenine nucleotide alpha hydrolases-like domain-containing protein.","AT1G03880","CRU2",415080,-0.35614,0.083344,-4.2732,{"v":1.93e-05,"d":"1.93E-05"},{"v":9.95e-05,"d":"9.95E-05"},"full_name=cruciferin 2. cruciferin 2. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT4G29100","BHLH68",113.19,-0.94177,0.19506,-4.8281,{"v":1.38e-06,"d":"1.38E-06"},{"v":6.88e-06,"d":"6.88E-06"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT5G23120","HCF136",100.4,0.81208,0.21994,3.6923,{"v":2.22E-4,"d":"2.22E-04"},1.0807E-3,"full_name=HIGH CHLOROPHYLL FLUORESCENCE 136. photosystem II stability/assembly factor, chloroplast (HCF136). encodes a stability and/or assembly factor of photosystem II"]
["AT2G43060","IBH1",612.85,-0.51794,0.15725,-3.2938,{"v":0.000988,"d":"9.88E-04"},0.0054245,"full_name=ILI1 binding bHLH 1. ILI1 binding bHLH 1.","AT4G31150",null,90.5,-0.78997,0.22127,-3.5702,{"v":3.57E-4,"d":"3.57E-04"},0.0018964,"endonuclease V family protein.","AT1G52780",null,65.383,-1.187,0.27795,-4.2706,{"v":1.95E-5,"d":"1.95E-05"},{"v":1.01E-4,"d":"1.01E-04"},"PII, uridylyltransferase (DUF2921).","AT4G35985",null,8.1862,-6.649,1.3787,-4.8228,{"v":1.42E-6,"d":"1.42E-06"},{"v":7.05e-06,"d":"7.05E-06"},"Senescence/dehydration-associated protein-like protein.","AT1G63150",null,12.782,-2.5952,0.7033,-3.6901,{"v":2.24E-4,"d":"2.24E-04"},0.0010886,"Tetratricopeptide repeat (TPR)-like superfamily protein. Transacting siRNA generating locus."]
["AT1G79330","MC5",134.22,0.63123,0.19182,3.2907,{"v":0.000999,"d":"9.99E-04"},0.0054762,"full_name=metacaspase 5. metacaspase 5. Metacaspase AtMCPb2/AMC6. Caspase family protein. Arginine/lysine-specific cysteine protease activity. Induces apoptosis in yeast. Contains Pfam domain, PF00656: ICE-like protease (caspase) p20 domain. Arabidopsis contains three type I MCP genes (MCP1a-c) and six type II MCP genes (MCP2a%E2%80%93f): AtMCP1a/At5g64240, AtMCP1b/At1g02170, AtMCP1c/At4g25110, AtMCP2a/At1g79310, AtMCP2b/At1g79330, AtMCP2c/At1g79320, AtMCP2d/At1g79340, AtMCP2e/At1g16420, AtMCP2f/At5g04200.","AT5G23120","HCF136",48.818,-1.0655,0.29882,-3.5655,{"v":0.000363,"d":"3.63E-04"},1.9276E-3,"full_name=HIGH CHLOROPHYLL FLUORESCENCE 136. photosystem II stability/assembly factor, chloroplast (HCF136). encodes a stability and/or assembly factor of photosystem II","AT5G22330","RIN1",223.86,0.66531,0.1559,4.2676,{"v":1.98E-5,"d":"1.98E-05"},{"v":1.02E-4,"d":"1.02E-04"},"full_name=RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1. P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT2G42580","TTL3",19.629,-3.4332,0.71249,-4.8185,{"v":1.45e-06,"d":"1.45E-06"},{"v":7.2e-06,"d":"7.20E-06"},"full_name=tetratricopetide-repeat thioredoxin-like 3. tetratricopetide-repeat thioredoxin-like 3. Encodes a member of the TTL family and contains a thioredoxin like domain and three tandom TPRs. Interacts physically with BRL2/VH1 and appears to play a role in brassiosteroid and auxin signaling. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. The TTL family is required for osmotic stress tolerance and male sporogenesis.","AT5G55360",null,4.6468,5.4959,1.4907,3.6869,{"v":0.000227,"d":"2.27E-04"},1.1006E-3,"MBOAT (membrane bound O-acyl transferase) family protein."]
["AT4G09760","CEK3",803.34,0.34902,0.10608,3.2903,0.0010009,0.0054834,"Protein kinase superfamily protein. encodes a choline synthase whose gene expression is induced by high salt and mannitol.","AT4G33800",null,37.64,-1.2126,0.34009,-3.5654,{"v":0.000363,"d":"3.63E-04"},1.9276E-3,"hypothetical protein.","AT1G01610","GPAT4",58.248,-1.2322,0.28882,-4.2663,{"v":1.99e-05,"d":"1.99E-05"},{"v":1.02E-4,"d":"1.02E-04"},"full_name=GLYCEROL-3-PHOSPHATE sn-2-ACYLTRANSFERASE 4. glycerol-3-phosphate acyltransferase 4. bifunctional sn-glycerol-3-phosphate 2-O-acyltransferase/phosphatase. Involved in cutin assembly and is functionally redundant with GPAT8.","AT1G76850","SEC5A",814.64,-0.4416,0.091659,-4.8179,{"v":1.45e-06,"d":"1.45E-06"},{"v":7.22e-06,"d":"7.22E-06"},"full_name=exocyst complex component sec5. exocyst complex component sec5. Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.","AT1G78100","AUF1",96.789,0.88277,0.23945,3.6867,{"v":0.000227,"d":"2.27E-04"},1.1011E-3,"full_name=auxin up-regulated f-box protein 1. F-box family protein."]
["AT5G43170","ZF3",27.744,-1.3817,0.42055,-3.2854,0.0010182,0.0055696,"full_name=zinc-finger protein 3. zinc-finger protein 3. Encodes zinc finger protein. mRNA levels are elevated in response to high salinity and low temperature. The protein is localized to the nucleus and acts as a transcriptional repressor.","AT5G07000","ST2B",647.48,0.37786,0.10601,3.5644,{"v":0.000365,"d":"3.65E-04"},1.9322E-3,"full_name=sulfotransferase 2B. sulfotransferase 2B. Encodes a member of the sulfotransferase family of proteins. Although it has 85% amino acid identity with ST2A (At5g07010), this protein is not able to transfer a sulfate group to 11- or 12-hydroxyjasmonic acid in vitro. It may be able to act on structurally related jasmonates.","AT5G59320","LTP3",6.2507,-5.9248,1.3899,-4.2629,{"v":2.02E-5,"d":"2.02E-05"},{"v":0.000104,"d":"1.04E-04"},"full_name=lipid transfer protein 3. lipid transfer protein 3. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.","AT3G22440",null,1949.2,0.36432,0.075668,4.8147,{"v":1.47e-06,"d":"1.47E-06"},{"v":7.32e-06,"d":"7.32E-06"},"FRIGIDA-like protein.","AT1G70180",null,646.61,0.36572,0.099238,3.6853,{"v":0.000228,"d":"2.28E-04"},0.0011058,"Sterile alpha motif (SAM) domain-containing protein."]
["AT5G42010",null,13.319,2.0476,0.62457,3.2783,1.0443E-3,0.0057001,"Transducin/WD40 repeat-like superfamily protein.","AT1G64040","TOPP3",282.44,0.49931,0.14034,3.5579,{"v":0.000374,"d":"3.74E-04"},1.9765E-3,"full_name=type one serine/threonine protein phosphatase 3. type one serine/threonine protein phosphatase 3. Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers.","AT1G61890",null,329.44,0.7116,0.16706,4.2595,{"v":2.05E-5,"d":"2.05E-05"},{"v":1.05E-4,"d":"1.05E-04"},"MATE efflux family protein.","AT2G03640",null,375.64,0.58102,0.12077,4.8111,{"v":1.5E-6,"d":"1.50E-06"},{"v":7.44e-06,"d":"7.44E-06"},"Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein.","AT1G30490","PHV",106.57,-0.75449,0.20488,-3.6826,{"v":2.31E-4,"d":"2.31E-04"},0.0011151,"full_name=PHAVOLUTA. Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein. Dominant PHV mutations cause transformation of abaxial leaf fates into adaxial leaf fates. Has overlapping functions with PHABULOSA, REVOLUTA and CORONA/ATHB15 in patterning the apical portion of the embryo. Encodes a member of HD-Zip family which contains homeodomain-leucine zipper domains and domain similar to a mammalian sterol binding domain."]
["AT5G37475",null,253.21,0.49471,0.15111,3.2738,0.001061,5.7827E-3,"Translation initiation factor eIF3 subunit.","AT4G36900","RAP2.10",155.84,0.68332,0.19218,3.5557,{"v":3.77E-4,"d":"3.77E-04"},0.0019901,"full_name=related to AP2 10. related to AP2 10. encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.10). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.9 and RAP2.1.","AT1G55460","KIN17",253.74,0.71661,0.16834,4.257,{"v":2.07e-05,"d":"2.07E-05"},{"v":1.06E-4,"d":"1.06E-04"},"DNA/RNA-binding protein Kin17, conserved region.","AT4G09890",null,13.411,-3.828,0.79638,-4.8067,{"v":1.53E-6,"d":"1.53E-06"},{"v":7.59e-06,"d":"7.59E-06"},"mediator of RNA polymerase II transcription subunit, putative (DUF3511).","AT2G38580",null,189.18,-0.58011,0.15771,-3.6783,{"v":0.000235,"d":"2.35E-04"},0.0011322,"Mitochondrial ATP synthase D chain-related protein."]
["AT1G09420","G6PD4",1136.1,-0.3123,0.095442,-3.2721,0.0010675,0.0058091,"full_name=glucose-6-phosphate dehydrogenase 4. glucose-6-phosphate dehydrogenase 4. Encodes a protein similar to glucose-6-phosphate dehydrogenase but, based on amino acid differences in the active site and lack of activity, does not encode a functional G6PDH. The amino acid sequence for the consensus sequence of the G6PDH active site (DHYLGKE) differs in three places in this protein. gc exon splice site at 20574 is based on protein alignment, and is not confirmed experimentally.","AT1G25310","MEE8",68.373,1.1164,0.31421,3.553,{"v":0.000381,"d":"3.81E-04"},0.0020074,"full_name=maternal effect embryo arrest 8. basic helix-loop-helix (bHLH) DNA-binding family protein.","AT1G78370","GSTU20",20.853,-2.4415,0.57427,-4.2515,{"v":2.12E-5,"d":"2.12E-05"},{"v":1.08E-4,"d":"1.08E-04"},"full_name=glutathione S-transferase TAU 20. glutathione S-transferase TAU 20. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","AT1G17950","MYB52",14.329,-5.5761,1.1609,-4.8032,{"v":1.56e-06,"d":"1.56E-06"},{"v":7.72e-06,"d":"7.72E-06"},"full_name=myb domain protein 52. myb domain protein 52. putative transcription factor: R2R3-MYB transcription family","AT1G72160","PATL3",536.39,-0.37646,0.10244,-3.675,{"v":0.000238,"d":"2.38E-04"},0.0011452,"Sec14p-like phosphatidylinositol transfer family protein."]
["AT1G14840","MAP70-4",378.97,-0.47241,0.14459,-3.2673,0.0010859,0.0058989,"full_name=microtubule-associated proteins 70-4. microtubule-associated proteins 70-4. Encodes a microtubule associated protein (MAP70-4). Expressed in all tissues.","AT1G18460","ALPHA/BETA-HYDROLASE",597.25,-0.42147,0.11873,-3.5497,{"v":3.86E-4,"d":"3.86E-04"},0.0020294,"alpha/beta-Hydrolases superfamily protein.","AT5G66330",null,10.999,-3.7872,0.89144,-4.2484,{"v":2.15e-05,"d":"2.15E-05"},{"v":1.1E-4,"d":"1.10E-04"},"Leucine-rich repeat (LRR) family protein.","AT4G03050","AOP3",78.963,-5.1527,1.0748,-4.7943,{"v":1.63e-06,"d":"1.63E-06"},{"v":8.05e-06,"d":"8.05E-06"},"2-oxoglutarate-dependent dioxygenase. Transcriptional silent in leaf tissues of ecotype Col. The transcribed allele in ecotype Ler encodes a 2-oxoglutarate-dependent dioxygenase which is involved in glucosinolate biosynthesis. The natural variation in this locus explains the diversification of hydroxyalkyl glucosinolates among different ecotypes of Arabidopsis.","AT5G21920","YLMG2",383.68,-0.43053,0.11733,-3.6694,{"v":2.43E-4,"d":"2.43E-04"},0.0011685,"YGGT family protein."]
["AT1G69420",null,416.55,-0.46894,0.14363,-3.2648,1.0953E-3,0.0059408,"DHHC-type zinc finger family protein.","AT1G60960","IRT3",145.68,0.77271,0.21801,3.5444,{"v":0.000394,"d":"3.94E-04"},0.0020679,"full_name=iron regulated transporter 3. iron regulated transporter 3. Encodes a plasma membrane localized zinc/iron transporter.","AT2G33330","PDLP3",6.2191,-5.9136,1.3937,-4.2432,{"v":2.2e-05,"d":"2.20E-05"},{"v":1.12E-4,"d":"1.12E-04"},"full_name=plasmodesmata-located protein 3. plasmodesmata-located protein 3. Encodes a plasmodesmal protein that affects the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.","AT5G59700",null,147.31,0.89084,0.18598,4.79,{"v":1.67e-06,"d":"1.67E-06"},{"v":8.21e-06,"d":"8.21E-06"},"Protein kinase superfamily protein.","AT5G07095",null,40.766,1.4351,0.3915,3.6657,{"v":0.000247,"d":"2.47E-04"},0.0011839]
["AT1G35560","TCP23",18.244,-1.6127,0.49451,-3.2612,0.0011093,0.0060067,"TCP family transcription factor. Encodes a member of the TCP-P subfamily that is involved in flowering time control and plant development. Mutants present an early flowering phenotype.","AT2G17695",null,84.277,0.83003,0.23447,3.5401,{"v":0.0004,"d":"4.00E-04"},0.0020984,"outer envelope protein.","AT5G51640","YLS7",128.21,-0.84714,0.19972,-4.2416,{"v":2.22e-05,"d":"2.22E-05"},{"v":1.13E-4,"d":"1.13E-04"},"full_name=YELLOW-LEAF-SPECIFIC GENE 7. trichome birefringence-like protein (DUF828). Encodes leaf-senescence-related protein. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT2G14661",null,7.7655,-6.5634,1.3709,-4.7878,{"v":1.69e-06,"d":"1.69E-06"},{"v":8.29e-06,"d":"8.29E-06"},"pseudogene. Pseudogene of AT2G04040; ATDTX1; antiporter/ multidrug efflux pump/ multidrug transporter/ transporter","AT5G54810","TSB1",974.77,0.31314,0.085492,3.6628,{"v":0.000249,"d":"2.49E-04"},0.0011953,"full_name=tryptophan synthase beta-subunit 1. tryptophan synthase beta-subunit 1. A.thaliana tryptophan synthase beta subunit (trpB)"]
["AT4G32750",null,157.23,0.56275,0.17262,3.2601,1.1137E-3,0.0060198,"transmembrane protein.","AT4G34830","MRL1",49.725,-1.0614,0.30004,-3.5375,{"v":0.000404,"d":"4.04E-04"},0.0021154,"full_name=MATURATION OF RBCL 1. Pentatricopeptide repeat (PPR) superfamily protein. Encodes MRL1, a conserved pentatricopeptide repeat protein, required for stabilization of rbcL mRNA.","AT4G16143","IMPA-2",466.31,0.55275,0.13037,4.2397,{"v":2.24e-05,"d":"2.24E-05"},{"v":0.000114,"d":"1.14E-04"},"full_name=importin alpha isoform 2. importin alpha isoform 2. Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.","AT2G38740","SGPP",49.596,-1.4428,0.30169,-4.7825,{"v":1.73E-6,"d":"1.73E-06"},{"v":8.5e-06,"d":"8.50E-06"},"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein.","AT5G64580","EMB3144",347.56,-0.4555,0.12449,-3.659,{"v":0.000253,"d":"2.53E-04"},1.2113E-3,"full_name=EMBRYO DEFECTIVE 3144. AAA-type ATPase family protein."]
["AT1G44770",null,436.94,0.45222,0.13889,3.2559,0.0011303,0.0060993,"elongation factor.","AT5G20190",null,254.76,0.54369,0.15387,3.5335,{"v":0.00041,"d":"4.10E-04"},2.1438E-3,"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT1G72030",null,13.453,-2.8048,0.66262,-4.2329,{"v":2.31e-05,"d":"2.31E-05"},{"v":1.17E-4,"d":"1.17E-04"},"Acyl-CoA N-acyltransferases (NAT) superfamily protein.","AT3G23830","GRP4",99.513,1.3172,0.27578,4.7763,{"v":1.79E-6,"d":"1.79E-06"},{"v":8.75e-06,"d":"8.75E-06"},"full_name=glycine-rich RNA-binding protein 4. glycine-rich RNA-binding protein 4. encodes a glycine-rich RNA binding protein. Gene expression is induced by cold and reduced by ionic (salt) and non-ionic (mannitol) osmotic stress. Lines overexpressing the gene are slightly more tolerant to osmotic stress during germination.","AT1G09070","SRC2",1132.2,0.29504,0.080706,3.6557,{"v":0.000256,"d":"2.56E-04"},0.0012245,"full_name=soybean gene regulated by cold-2. soybean gene regulated by cold-2. SRC2 specifically binds the peptide PIEPPPHH, and moves from ER to a vacuole fraction where it gets internalized. Involved in Protein Storage Vacuole targeting."]
["AT3G26950",null,244.3,0.485,0.14917,3.2513,1.1488E-3,0.0061879,"transmembrane protein.","AT3G58570","RH52",594.72,-0.40435,0.11462,-3.5276,{"v":0.000419,"d":"4.19E-04"},2.1879E-3,"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT2G15830",null,37.771,1.456,0.34441,4.2276,{"v":2.36e-05,"d":"2.36E-05"},{"v":0.000119,"d":"1.19E-04"},"hypothetical protein.","AT4G14615",null,388.45,0.72111,0.15111,4.772,{"v":1.82e-06,"d":"1.82E-06"},{"v":8.92e-06,"d":"8.92E-06"},"sporulation-specific protein.","AT2G07687",null,20.038,2.0099,0.55048,3.6513,{"v":2.61E-4,"d":"2.61E-04"},0.0012437,"Cytochrome c oxidase, subunit III."]
["AT1G76360","PBL31",37.188,1.1692,0.35984,3.2491,1.1577E-3,0.0062268,"Protein kinase superfamily protein.","AT3G56810",null,9.8069,-2.6377,0.74852,-3.5239,{"v":0.000425,"d":"4.25E-04"},0.0022157,"hypothetical protein.","AT4G27010","EMB2788",198.58,0.83558,0.19778,4.2247,{"v":2.39e-05,"d":"2.39E-05"},{"v":1.21E-4,"d":"1.21E-04"},"full_name=EMBRYO DEFECTIVE 2788. ribosome 60S biogenesis amino-terminal protein.","AT4G22220","ISU1",2456.3,0.4329,0.090818,4.7667,{"v":1.87e-06,"d":"1.87E-06"},{"v":9.14e-06,"d":"9.14E-06"},"SufE/NifU family protein. Encodes a mitochondrial protein similar to E.coli IscU. In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein.","AT4G22740",null,687.04,-0.37866,0.10376,-3.6493,{"v":2.63E-4,"d":"2.63E-04"},0.0012513,"glycine-rich protein."]
["AT5G57345","ATOXR",21.492,-1.5233,0.46923,-3.2464,0.0011687,0.0062764,"transmembrane protein.","AT2G23410","CPT",10.636,-2.7235,0.77371,-3.5201,{"v":0.000431,"d":"4.31E-04"},0.0022441,"full_name=cis-prenyltransferase. cis-prenyltransferase. encodes cis-prenyltransferase","AT5G02540",null,37.43,-1.8336,0.43495,-4.2156,{"v":2.49e-05,"d":"2.49E-05"},{"v":1.26E-4,"d":"1.26E-04"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT1G76550",null,34.627,-2.0124,0.42246,-4.7635,{"v":1.9E-6,"d":"1.90E-06"},{"v":9.28e-06,"d":"9.28E-06"},"Phosphofructokinase family protein.","AT4G10420",null,23.067,1.7355,0.47579,3.6476,{"v":0.000265,"d":"2.65E-04"},0.0012577,"FBD / Leucine Rich Repeat domains containing protein."]
["AT5G23460",null,131.78,0.65264,0.20105,3.2462,0.0011697,0.0062801,"hypothetical protein.","AT5G41160","PUP12",7.121,-4.2978,1.221,-3.5199,{"v":0.000432,"d":"4.32E-04"},0.0022455,"full_name=purine permease 12. purine permease 12. Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.","AT5G11320","YUC4",45.16,-1.453,0.34482,-4.2138,{"v":2.51E-5,"d":"2.51E-05"},{"v":1.27E-4,"d":"1.27E-04"},"full_name=YUCCA4. Flavin-binding monooxygenase family protein. Belongs to the YUC gene family. Encodes a predicted flavin monooxygenase YUC4 involved in auxin biosynthesis and plant development.","AT5G45290",null,23.475,-2.3518,0.49396,-4.7611,{"v":1.93e-06,"d":"1.93E-06"},{"v":9.39e-06,"d":"9.39E-06"},"RING/U-box superfamily protein.","AT5G12010",null,347.1,0.43873,0.12029,3.6472,{"v":0.000265,"d":"2.65E-04"},0.0012593,"nuclease."]
["AT1G78850","MBL1",20.276,-1.703,0.52584,-3.2387,1.2009E-3,0.0064302,"D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein. curculin-like (mannose-binding) lectin family protein, low similarity to ser/thr protein kinase from Zea mays (GI:2598067); contains Pfam lectin (probable mannose binding) domain PF01453 but not the protein kinase domain of the Z. mays protein","AT1G04950","TAFII59",299.66,-0.491,0.13981,-3.5119,{"v":0.000445,"d":"4.45E-04"},0.0023075,"full_name=TATA BOX ASSOCIATED FACTOR II 59. TATA BOX ASSOCIATED FACTOR II 59. Encodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6. Mutants are embryo lethal and transmission of the mutant allele through the male gametophyte is significantly reduced. This is due to reduced pollen tube growth of the mutant.","AT3G53460","CP29",292.33,0.79459,0.18874,4.21,{"v":2.55E-5,"d":"2.55E-05"},{"v":0.000128,"d":"1.28E-04"},"full_name=chloroplast RNA-binding protein 29. chloroplast RNA-binding protein 29. Encodes a nuclear gene with a consensus RNA-binding domain that is localized to the chloroplast.","AT5G03340","AtCDC48C",728.09,0.61731,0.12992,4.7514,{"v":2.02e-06,"d":"2.02E-06"},{"v":9.8200000000000008E-6,"d":"9.82E-06"},"full_name=cell division cycle 48C. ATPase, AAA-type, CDC48 protein.","AT1G09500",null,257.48,-0.50986,0.14014,-3.6382,{"v":0.000275,"d":"2.75E-04"},1.3009E-3,"NAD(P)-binding Rossmann-fold superfamily protein. similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase"]
["AT1G60160","KT12",35.263,-1.2165,0.37576,-3.2374,0.0012062,0.0064547,"Potassium transporter family protein.","AT5G54770","THI1",20275,-0.24524,0.069844,-3.5112,{"v":4.46E-4,"d":"4.46E-04"},0.0023121,"thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4). Encodes a thiamine biosynthetic gene that has a dual function in thiamine biosynthesis and mitochondrial DNA damage tolerance. It appears to be involved in producing the thiazole portion of thiamine (vitamin B1). A crystal structure of the protein reveals that it forms a 2-ring homo-octamer.","AT4G35410",null,25.27,-1.9332,0.45933,-4.2086,{"v":2.57e-05,"d":"2.57E-05"},{"v":0.000129,"d":"1.29E-04"},"Clathrin adaptor complex small chain family protein.","AT1G03250",null,183.79,-0.78221,0.16475,-4.748,{"v":2.05e-06,"d":"2.05E-06"},{"v":9.98e-06,"d":"9.98E-06"},"R3H domain protein.","AT5G04830",null,151.58,-0.66192,0.182,-3.6369,{"v":0.000276,"d":"2.76E-04"},0.0013061,"Nuclear transport factor 2 (NTF2) family protein."]
["AT4G18620","PYL13",8.343,3.0058,0.93002,3.232,0.0012291,0.0065656,"full_name=PYR1-like 13. PYR1-like 13. Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.","AT3G06010","ATCHR12",122.5,0.66829,0.19051,3.5079,{"v":0.000452,"d":"4.52E-04"},0.0023375,"SNF2/Brahma-type chromatin-remodeling protein CHR12. Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein. AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress.","AT5G16550","LDIP",697.7,0.51545,0.1226,4.2044,{"v":2.62E-5,"d":"2.62E-05"},{"v":0.000131,"d":"1.31E-04"},"voltage-dependent L-type calcium channel subunit.","AT2G31410",null,403.37,0.80153,0.16895,4.7441,{"v":2.09e-06,"d":"2.09E-06"},{"v":1.02e-05,"d":"1.02E-05"},"coiled-coil protein.","AT1G52080","AR791",129.04,-0.72866,0.20053,-3.6337,{"v":0.000279,"d":"2.79E-04"},1.3204E-3,"actin binding protein family. unknown function"]
["AT4G20830","ATBBE19",290.1,0.44704,0.13849,3.2279,1.2469E-3,0.0066507,"FAD-binding Berberine family protein.","AT3G48410",null,202.54,-0.57741,0.16476,-3.5046,{"v":4.57E-4,"d":"4.57E-04"},0.0023626,"alpha/beta-Hydrolases superfamily protein.","AT3G16140","PSAH-1",5.9661,-5.8576,1.3941,-4.2015,{"v":2.65E-5,"d":"2.65E-05"},{"v":0.000133,"d":"1.33E-04"},"full_name=photosystem I subunit H-1. photosystem I subunit H-1. Encodes subunit H of photosystem I reaction center subunit VI.","AT5G42480","ARC6",235.95,0.70018,0.14768,4.7413,{"v":2.12E-6,"d":"2.12E-06"},{"v":1.03E-5,"d":"1.03E-05"},"full_name=ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6. Chaperone DnaJ-domain superfamily protein. Shows homology to the cyanobacterial cell division protein Ftn2, mutant only has two mesophyll cell chloroplasts. Protein was localized to a ring at the center of the chloroplasts. Probably involved in functions in the assembly and/or stabilization of the plastid-dividing FtsZ ring, inhibiting FtsZ filament formation in the chloroplast.","AT5G11040","TRS120",332.01,0.45856,0.12629,3.631,{"v":0.000282,"d":"2.82E-04"},1.3323E-3,"TRS120. Encodes a tethering factor required for cell plate biogenesis."]
["AT5G44250",null,161.69,0.54823,0.17006,3.2238,0.0012651,0.0067356,"peptidase, S9A/B/C family, catalytic domain protein (Protein of unknown function DUF829, transmembrane 53).","AT5G09980","PROPEP4",35.524,-1.2536,0.358,-3.5016,{"v":0.000462,"d":"4.62E-04"},0.0023849,"full_name=elicitor peptide 4 precursor. elicitor peptide 4 precursor.","AT4G05410","YAO",119.61,0.84484,0.20124,4.1982,{"v":2.69E-5,"d":"2.69E-05"},{"v":1.35E-4,"d":"1.35E-04"},"full_name=YAOZHE. Transducin/WD40 repeat-like superfamily protein. Encodes a nucleolar protein with seven WD40-repeats that plays a role in embryo sac development and is critical for the correct positioning of the division plane of zygote and the apical cell lineage in Arabidopsis. YAO may act by modulating nucleolar function, such as rRNA biogenesis, during early embryogenesis and gametogenesis.","AT1G68250",null,15.57,3.2751,0.69213,4.7319,{"v":2.22e-06,"d":"2.22E-06"},{"v":1.07e-05,"d":"1.07E-05"},"hypothetical protein.","AT4G34332",null,9.0405,3.4947,0.9633,3.6279,{"v":0.000286,"d":"2.86E-04"},0.0013463,"Natural antisense transcript overlaps with AT4G34330. Potential natural antisense gene, locus overlaps with AT4G34330"]
["AT1G27350",null,3035.5,0.30598,0.095014,3.2204,0.0012803,0.0068067,"Ribosome associated membrane protein RAMP4.","AT3G20540","POLGAMMA1",180.71,0.61095,0.17451,3.5009,{"v":4.64E-4,"d":"4.64E-04"},0.0023878,"full_name=polymerase gamma 1. polymerase gamma 1. Encodes an organellar DNA polymerase I that is also involved in double strand break repair.","AT1G09510",null,16.113,-2.5946,0.61863,-4.1942,{"v":2.74e-05,"d":"2.74E-05"},{"v":1.37E-4,"d":"1.37E-04"},"NAD(P)-binding Rossmann-fold superfamily protein. similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase","AT2G32660","RLP22",39.81,-1.5681,0.33168,-4.7277,{"v":2.27e-06,"d":"2.27E-06"},{"v":1.1E-5,"d":"1.10E-05"},"full_name=receptor like protein 22. receptor like protein 22.","AT3G56460",null,582.74,0.36297,0.10017,3.6237,{"v":2.9E-4,"d":"2.90E-04"},1.3663E-3,"GroES-like zinc-binding alcohol dehydrogenase family protein."]
["AT3G07215",null,93.313,0.84582,0.2627,3.2197,0.0012831,0.0068154,"other_RNA. Unknown gene","AT4G18390","TCP2",68.055,0.89952,0.2572,3.4974,{"v":0.00047,"d":"4.70E-04"},0.0024176,"full_name=TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2. TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2.","AT3G44310","NIT1",260.68,-0.71976,0.17176,-4.1905,{"v":2.78e-05,"d":"2.78E-05"},{"v":0.000139,"d":"1.39E-04"},"full_name=nitrilase 1. nitrilase 1. Mutants are resistant to indole-3-acetonitrile (IAN). NIT1 catalyzes the terminal activation step in indole-acetic acid biosynthesis. Predominantly expressed isoform of nitrilase isoenzyme family. Aggregation of NIT1 in cells directly abutting wound sites is one of the earliest events associated with wound and herbicide-induced cell death. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. It is also involved in the conversion of IAN to IAM (indole-3-acetamide) and other non-auxin-related metabolic processes.","AT1G68560","XYL1",16.612,3.5399,0.74917,4.7251,{"v":2.3E-6,"d":"2.30E-06"},{"v":1.11E-5,"d":"1.11E-05"},"full_name=alpha-xylosidase 1. alpha-xylosidase 1. Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.","AT4G12230",null,201.94,-0.55719,0.15384,-3.6219,{"v":0.000293,"d":"2.93E-04"},1.3747E-3,"alpha/beta-Hydrolases superfamily protein."]
["AT1G08570","ACHT4",1835.9,0.36936,0.11497,3.2126,1.3154E-3,0.0069685,"full_name=atypical CYS HIS rich thioredoxin 4. atypical CYS HIS rich thioredoxin 4. Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.","AT3G05400",null,62.53,1.0029,0.28752,3.4882,{"v":4.86E-4,"d":"4.86E-04"},0.0024956,"Major facilitator superfamily protein.","AT5G35790","G6PD1",22.166,-1.9872,0.47489,-4.1845,{"v":2.86e-05,"d":"2.86E-05"},{"v":0.000142,"d":"1.42E-04"},"full_name=glucose-6-phosphate dehydrogenase 1. glucose-6-phosphate dehydrogenase 1. Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root.","AT3G17590","BSH",170.44,0.82995,0.17589,4.7187,{"v":2.37e-06,"d":"2.37E-06"},{"v":1.14e-05,"d":"1.14E-05"},"full_name=BUSHY GROWTH. transcription regulatory protein SNF5, putative (BSH). Encodes the Arabidopsis homologue of yeast SNF5 and represents a conserved subunit of plant SWI/SNF complexes.","AT2G32730",null,696.15,0.36055,0.099687,3.6168,{"v":0.000298,"d":"2.98E-04"},0.0013979,"26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit."]
["AT1G18840","IQD30",1470,0.28704,0.089466,3.2083,0.0013351,0.0070626,"full_name=IQ-domain 30. IQ-domain 30.","AT1G28400",null,773.72,-0.44345,0.12725,-3.4848,{"v":0.000493,"d":"4.93E-04"},0.0025239,"GATA zinc finger protein.","AT5G66880","SNRK2.3",113.74,0.87025,0.20808,4.1822,{"v":2.89e-05,"d":"2.89E-05"},{"v":0.000143,"d":"1.43E-04"},"full_name=sucrose nonfermenting 1(SNF1)-related protein kinase 2.3. sucrose nonfermenting 1(SNF1)-related protein kinase 2.3. encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Enzyme involved in the ABA signaling during seed germination, dormancy and seedling growth.","AT5G14790",null,49.96,-1.4303,0.3034,-4.7144,{"v":2.42e-06,"d":"2.42E-06"},{"v":1.16e-05,"d":"1.16E-05"},"ARM repeat superfamily protein.","AT3G30390",null,557.91,0.42843,0.11858,3.6132,{"v":0.000302,"d":"3.02E-04"},0.0014155,"Transmembrane amino acid transporter family protein. Encodes a putative amino acid transporter."]
["AT4G26840","SUMO1",178.26,-0.52785,0.16476,-3.2038,1.3564E-3,0.0071648,"full_name=small ubiquitin-like modifier 1. small ubiquitin-like modifier 1. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets.","AT1G18750","AGL65",70.535,0.87676,0.25178,3.4823,{"v":0.000497,"d":"4.97E-04"},0.0025438,"full_name=AGAMOUS-like 65. AGAMOUS-like 65. Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL65 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth.","AT2G47490","NDT1",95.408,-0.91279,0.21845,-4.1785,{"v":2.93e-05,"d":"2.93E-05"},{"v":1.46E-4,"d":"1.46E-04"},"full_name=NAD+ transporter 1. NAD+ transporter 1. Encodes a chloroplast-localized NAD+ transporter that transports NAD+ in a counter exchange mode with ADP and AMP in vitro.","AT5G04235",null,273.1,0.71186,0.15105,4.7127,{"v":2.44e-06,"d":"2.44E-06"},{"v":1.17E-5,"d":"1.17E-05"},"transposable_element_gene.","AT3G23910",null,393.64,-0.43633,0.12083,-3.6112,{"v":0.000305,"d":"3.05E-04"},0.0014247,"reverse transcriptase-like protein."]
["AT1G07510","ftsh10",445.22,0.44556,0.13917,3.2014,1.3675E-3,0.0072105,"full_name=FTSH protease 10. FTSH protease 10. encodes an FtsH protease that is localized to the mitochondrion","AT2G31970","RAD50",338.44,0.48869,0.14047,3.479,{"v":0.000503,"d":"5.03E-04"},0.0025702,"DNA repair-recombination protein (RAD50). Encodes the Arabidopsis RAD50 homologue. It is involved in double strand break repair. Component of the meiotic recombination complex that processes meiotic double-strand-breaks to produce single-stranded DNA ends, which act in the homology search and recombination. Accumulates in the nucleus during meiotic prophase, a process regulated by PHS1.","AT5G08470","PEX1",473.86,0.56903,0.13634,4.1736,{"v":3e-05,"d":"3.00E-05"},{"v":0.000148,"d":"1.48E-04"},"full_name=peroxisome 1. peroxisome 1. an AAA-ATPase that is the probable Arabidopsis orthologue of one of the AAA-ATPases involved in peroxisome biogenesis in yeasts and mammals.","AT1G73030","VPS46.2",453.52,-0.56347,0.11967,-4.7084,{"v":2.5e-06,"d":"2.50E-06"},{"v":1.2E-5,"d":"1.20E-05"},"SNF7 family protein. Encodes an ESCRT-related protein: CHMP1A/AT1G73030; CHMP1B/AT1G17730. CHMP1A and B mediate multivesicular body sorting of auxin carriers and are required for plant development. ESCRT: Endosomal Sorting Complexes Required For Transport machinery; CHMP: Charged Multivesicular Body Protein/Chromatin Modifying Protein.","AT3G12950",null,187.75,0.60201,0.16707,3.6033,{"v":0.000314,"d":"3.14E-04"},0.0014661,"Trypsin family protein."]
["AT5G53130","CNGC1",242.49,0.46372,0.14493,3.1995,1.3766E-3,0.0072479,"full_name=cyclic nucleotide gated channel 1. cyclic nucleotide gated channel 1. member of Cyclic nucleotide gated channel family","AT5G12860","DiT1",258.85,0.63319,0.18209,3.4773,{"v":0.000507,"d":"5.07E-04"},0.0025833,"full_name=dicarboxylate transporter 1. dicarboxylate transporter 1. AtpOMT1 encodes dicarboxylate transporter functions both as as an oxaloacetate/malate transporter and as a 2-oxoglutarate/malate transporter.","AT5G06050",null,56.522,-1.2117,0.29081,-4.1666,{"v":3.09e-05,"d":"3.09E-05"},{"v":0.000153,"d":"1.53E-04"},"Putative methyltransferase family protein.","AT1G67060",null,13.756,-3.6448,0.7751,-4.7024,{"v":2.57E-6,"d":"2.57E-06"},{"v":1.23e-05,"d":"1.23E-05"},"peptidase M50B-like protein.","AT1G33250",null,358.26,0.47866,0.133,3.5989,{"v":0.00032,"d":"3.20E-04"},0.001489,"beta-1,3-n-acetylglucosaminyltransferase radical fringe protein, putative (DUF604)."]
["AT1G68670","HHO2",101.62,-1.1367,0.3553,-3.1993,0.0013776,0.0072514,"myb-like transcription factor family protein.","AT3G53850","CASPL5B2",97.9,-0.76014,0.21871,-3.4755,{"v":0.00051,"d":"5.10E-04"},0.0025996,"Uncharacterized protein family (UPF0497).","AT1G21190","LSM3A",202.85,0.77905,0.18699,4.1662,{"v":3.1e-05,"d":"3.10E-05"},{"v":0.000153,"d":"1.53E-04"},"full_name=SM-like 3A. Small nuclear ribonucleoprotein family protein.","AT1G77260",null,223.59,-0.71714,0.15252,-4.7019,{"v":2.58e-06,"d":"2.58E-06"},{"v":1.23e-05,"d":"1.23E-05"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT2G33120","SAR1",451.12,0.45037,0.12517,3.5979,{"v":3.21E-4,"d":"3.21E-04"},1.4938E-3,"full_name=synaptobrevin-related protein 1. synaptobrevin-related protein 1. Encodes a member of Synaptobrevin-like protein family. Also known as VESICLE-ASSOCIATED MEMBRANE PROTEIN 722 (VAMP722). Required for cell plate formation."]
["AT2G27530","PGY1",1575.8,0.34798,0.10882,3.1977,1.3854E-3,0.0072797,"full_name=PIGGYBACK1. Ribosomal protein L1p/L10e family. Encodes ribosomal protein L10aP. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.","AT4G15950","NRPD4",75.487,-0.8593,0.24748,-3.4722,{"v":0.000516,"d":"5.16E-04"},0.0026271,"RNA polymerase II, Rpb4, core protein. Non-catalytic subunit common to Nuclear DNA-dependent RNA polymerases IV and V; homologous to budding yeast RPB4. Role in gene silencing. Required for RNA-directed DNA methylation.","AT5G56140",null,554.66,0.52303,0.12566,4.1622,{"v":3.15E-5,"d":"3.15E-05"},{"v":1.56E-4,"d":"1.56E-04"},"RNA-binding KH domain-containing protein.","AT5G56620","NAC099",7.2868,-6.4756,1.3808,-4.6897,{"v":2.74E-6,"d":"2.74E-06"},{"v":1.3e-05,"d":"1.30E-05"},"full_name=NAC domain containing protein 99. NAC domain containing protein 99.","AT2G44020",null,127.43,0.69529,0.19348,3.5937,{"v":0.000326,"d":"3.26E-04"},1.516E-3,"Mitochondrial transcription termination factor family protein."]
["AT1G14980","CPN10",270.71,0.49813,0.156,3.1932,0.0014068,0.0073812,"full_name=chaperonin 10. chaperonin 10. Encodes mitochondrial-localized chaperonin 10 that complements the E.coli groES mutant. Its mRNA is upregulated in response to heat shock treatment and is expressed uniformly in various organs.","AT2G28800","ALB3",237.92,0.53154,0.15313,3.4712,{"v":0.000518,"d":"5.18E-04"},0.0026336,"full_name=ALBINO 3. 63 kDa inner membrane family protein. member of Chloroplast membrane protein ALBINO3 family. Similar to pea PPF1 and may play a role in plant senescence.","AT1G12845",null,164.69,-0.96032,0.23079,-4.161,{"v":3.17e-05,"d":"3.17E-05"},{"v":1.56E-4,"d":"1.56E-04"},"transmembrane protein.","AT1G27470",null,324.59,0.59503,0.12701,4.685,{"v":2.8e-06,"d":"2.80E-06"},{"v":1.33E-5,"d":"1.33E-05"},"transducin family protein / WD-40 repeat family protein.","AT1G28120","OTU1",104.22,0.79403,0.22108,3.5916,{"v":0.000329,"d":"3.29E-04"},1.526E-3,"ubiquitin thioesterase otubain-like protein."]
["AT3G50100","SDN1",9.5007,-2.5856,0.81018,-3.1913,1.4161E-3,7.417E-3,"full_name=small RNA degrading nuclease 1. small RNA degrading nuclease 1. Encodes an exonuclease that degrades single-stranded small RNAs in vitro and limits the accumulation of small RNAs in vivo.","AT4G25540","MSH3",23.037,1.5322,0.44164,3.4693,{"v":5.22E-4,"d":"5.22E-04"},0.0026471,"full_name=homolog of DNA mismatch repair protein MSH3. homolog of DNA mismatch repair protein MSH3. encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH3 heterodimers bound 'insertion-deletion' DNA with three nucleotides (+AAG) or one nucleotide (+T) looped out much better than they bound DNA with a base/base mispair (T/G).","AT5G37680","ARLA1A",332.29,0.67174,0.16164,4.1557,{"v":3.24e-05,"d":"3.24E-05"},{"v":0.00016,"d":"1.60E-04"},"full_name=ADP-ribosylation factor-like A1A. ADP-ribosylation factor-like A1A. A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARL GTPases.","AT2G17110",null,158.17,0.80592,0.1723,4.6775,{"v":2.9e-06,"d":"2.90E-06"},{"v":1.38E-5,"d":"1.38E-05"},"DNA-directed RNA polymerase subunit beta, putative (DUF630 and DUF632).","AT1G78930","MTERF16",263.97,0.48361,0.13479,3.5878,{"v":0.000334,"d":"3.34E-04"},0.0015456,"Mitochondrial transcription termination factor family protein."]
["AT2G46390","SDH8",382.25,-0.47853,0.1501,-3.1881,0.0014323,7.4909E-3,"full_name=succinate dehydrogenase 8. succinate dehydrogenase subunit. predicted to encode subunit 8 of mitochondrial complex II and to participate in the respiratory chain","AT1G71500","PSB33",80.848,-0.83042,0.2396,-3.4659,{"v":0.000529,"d":"5.29E-04"},0.0026775,"Rieske (2Fe-2S) domain-containing protein. Encodes PSB33, a protein conserved in the plastid lineage. PSB33 is associated with the chloroplast thylakoid membrane and provides stability to Photosystem II.","AT1G54520","FLAP1",375.9,0.55875,0.13452,4.1536,{"v":3.27e-05,"d":"3.27E-05"},{"v":0.000161,"d":"1.61E-04"},"myelin-associated oligodendrocyte basic protein.","AT4G00830","LIF2",647,0.53953,0.11544,4.6737,{"v":2.96E-6,"d":"2.96E-06"},{"v":1.4E-5,"d":"1.40E-05"},"full_name=LHP1-Interacting Factor 2. RNA-binding (RRM/RBD/RNP motifs) family protein.","AT1G04950","TAFII59",408.94,0.42412,0.11831,3.5847,{"v":0.000337,"d":"3.37E-04"},1.5616E-3,"full_name=TATA BOX ASSOCIATED FACTOR II 59. TATA BOX ASSOCIATED FACTOR II 59. Encodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6. Mutants are embryo lethal and transmission of the mutant allele through the male gametophyte is significantly reduced. This is due to reduced pollen tube growth of the mutant."]
["AT1G08250","ADT6",111.74,-0.67529,0.21222,-3.1821,0.0014622,0.0076339,"full_name=arogenate dehydratase 6. arogenate dehydratase 6. Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Although this enzyme has sequence similarity to prephenate dehydratases, it is 98 times more active with arogenate than prephenate in enzymatic assays.","AT4G31490","&#946;2-COP",351.31,-0.43875,0.12675,-3.4615,{"v":0.000537,"d":"5.37E-04"},0.0027171,"Coatomer, beta subunit.","AT5G42780","HB27",21.686,-2.1675,0.52225,-4.1503,{"v":3.32e-05,"d":"3.32E-05"},{"v":1.63E-4,"d":"1.63E-04"},"full_name=homeobox protein 27. homeobox protein 27.","AT5G35790","G6PD1",24.255,2.1622,0.46351,4.6649,{"v":3.09e-06,"d":"3.09E-06"},{"v":1.46e-05,"d":"1.46E-05"},"full_name=glucose-6-phosphate dehydrogenase 1. glucose-6-phosphate dehydrogenase 1. Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root.","AT1G72990","BGAL17",112.94,-0.75455,0.21085,-3.5786,{"v":0.000345,"d":"3.45E-04"},1.5956E-3,"full_name=beta-galactosidase 17. beta-galactosidase 17."]
["AT5G39850",null,379.31,0.44966,0.14148,3.1784,1.4811E-3,0.0077216,"Ribosomal protein S4.","AT1G34630",null,367.14,-0.42869,0.12399,-3.4575,{"v":0.000545,"d":"5.45E-04"},0.0027531,"transmembrane protein.","AT1G71850",null,54.228,1.1508,0.27754,4.1465,{"v":3.38e-05,"d":"3.38E-05"},{"v":1.65E-4,"d":"1.65E-04"},"Ubiquitin carboxyl-terminal hydrolase family protein.","AT1G21080",null,735.29,-0.5528,0.1186,-4.6612,{"v":3.14E-6,"d":"3.14E-06"},{"v":1.49E-5,"d":"1.49E-05"},"DNAJ heat shock N-terminal domain-containing protein.","AT3G26720",null,204.41,-0.57242,0.16016,-3.5741,{"v":0.000351,"d":"3.51E-04"},1.6213E-3,"Glycosyl hydrolase family 38 protein."]
["AT5G04895","ABO6",30.997,1.2338,0.38885,3.1729,0.0015094,0.0078553,"full_name=ABA overly sensitive 6. DEA(D/H)-box RNA helicase family protein.","AT4G21280","PSBQA",7.5421,-3.7502,1.0856,-3.4546,{"v":0.000551,"d":"5.51E-04"},0.0027784,"full_name=photosystem II subunit QA. photosystem II subunit QA. Encodes the PsbQ subunit of the oxygen evolving complex of photosystem II.","AT5G03150","JKD",27.658,-1.8795,0.4539,-4.1407,{"v":3.46e-05,"d":"3.46E-05"},{"v":0.000169,"d":"1.69E-04"},"full_name=JACKDAW. C2H2-like zinc finger protein. JKD is a nuclear-localized putative transcription factor with three zinc finger domains. jkd mutants show a number of root patterning defects including ectopic periclinal divisions in the cortex, increased cell numbers in the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. jkd mutants also have a reduced number of meristematic cells in their roots. JKD can interact with the SCR and SHR proteins implicated in root patterning, as well as another zinc finger transcription factor, MAGPIE. All of these interactions require the first zinc finger in JKD according to a Y2H assay. There are also transcriptional interactions among these proteins. The initiation of JKD transcription does not appear to depend on SCR and SHR, but later expression in the post-embryonic QC cells and ground tissue initials is reduced in scr and shr mutants. JKD also appears to be required for SCR transcription beginning in the embryo. There is also some evidence that JKD plays a role in promoting the movement of SHR into the nucleus, particularly in QC cells, but this may be indirect.","AT3G15400","ATA20",59.458,1.3231,0.28407,4.6575,{"v":3.2e-06,"d":"3.20E-06"},{"v":1.51e-05,"d":"1.51E-05"},"full_name=anther 20. anther 20. Encodes a protein with novel repeat sequences and a glycine-rich domain which has a 53% identity to GRP1, a petunia glycine-rich cell wall protein.","AT3G16720","ATL2",70.238,0.92379,0.25874,3.5704,{"v":0.000356,"d":"3.56E-04"},0.0016415,"full_name=TOXICOS EN LEVADURA 2. TOXICOS EN LEVADURA 2. RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations."]
["AT4G05150",null,126.23,-0.72512,0.22878,-3.1695,1.5268E-3,0.0079322,"Octicosapeptide/Phox/Bem1p family protein.","AT2G27580","SAP3",206.61,0.55029,0.1594,3.4523,{"v":0.000556,"d":"5.56E-04"},0.0027975,"A20/AN1-like zinc finger family protein.","AT1G72130","NPF5.11",30.23,-1.6564,0.40051,-4.1358,{"v":3.54E-5,"d":"3.54E-05"},{"v":1.73E-4,"d":"1.73E-04"},"Major facilitator superfamily protein.","AT1G79110","BRG2",7.4612,-6.5036,1.3975,-4.6539,{"v":3.26e-06,"d":"3.26E-06"},{"v":1.54e-05,"d":"1.54E-05"},"full_name=BOI-related gene 2. zinc ion binding protein. Encodes one of the BRGs (BOI-related gene) involved in resistance to Botrytis cinerea.","AT5G47560","TDT",94.985,0.83121,0.23305,3.5667,{"v":0.000362,"d":"3.62E-04"},1.6618E-3,"full_name=tonoplast dicarboxylate transporter. tonoplast dicarboxylate transporter. Encodes a tonoplast malate/fumarate transporter."]
["ATCG00490","RBCL",97.169,-1.0568,0.33378,-3.1661,1.5448E-3,0.0080138,"ribulose-bisphosphate carboxylase. large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT1G17230",null,46.474,1.1266,0.32679,3.4473,{"v":0.000566,"d":"5.66E-04"},0.0028454,"Leucine-rich receptor-like protein kinase family protein.","AT2G41820","PXC3",21.846,-2.1605,0.52281,-4.1325,{"v":3.59e-05,"d":"3.59E-05"},{"v":1.75E-4,"d":"1.75E-04"},"Leucine-rich repeat protein kinase family protein.","AT3G47960","GTR1",210.45,-0.79678,0.17127,-4.6522,{"v":3.28e-06,"d":"3.28E-06"},{"v":1.55e-05,"d":"1.55E-05"},"full_name=GLUCOSINOLATE TRANSPORTER-1. Major facilitator superfamily protein. Encodes a high-affinity, proton-dependent glucosinolate-specific transporter that is crucial for the transport of both methionine- and tryptophan-derived glucosinolates to seeds.","AT5G65110","ACX2",966.35,0.32249,0.09051,3.563,{"v":0.000367,"d":"3.67E-04"},1.683E-3,"full_name=acyl-CoA oxidase 2. acyl-CoA oxidase 2. Encodes an acyl-CoA oxidase presumably involved in long chain fatty acid biosynthesis."]
["AT3G11700","FLA18",797.72,0.33967,0.10739,3.1628,0.0015625,0.008094,"full_name=FASCICLIN-like arabinogalactan protein 18 precursor. FASCICLIN-like arabinogalactan protein 18 precursor.","AT3G05685",null,12.307,2.4456,0.7105,3.442,{"v":0.000577,"d":"5.77E-04"},0.0028971,"Cystatin/monellin superfamily protein.","AT3G05900",null,66.961,-1.0946,0.26501,-4.1304,{"v":3.62e-05,"d":"3.62E-05"},{"v":1.76E-4,"d":"1.76E-04"},"neurofilament protein-like protein.","AT4G01680","MYB55",7.2966,-6.4768,1.3938,-4.6467,{"v":3.37e-06,"d":"3.37E-06"},{"v":1.59E-5,"d":"1.59E-05"},"full_name=myb domain protein 55. myb domain protein 55. Encodes a putative transcription factor (MYB55).","AT1G12430","ARK3",162.6,-0.60386,0.16984,-3.5555,{"v":3.77E-4,"d":"3.77E-04"},1.7292E-3,"full_name=armadillo repeat kinesin 3. armadillo repeat kinesin 3. Encodes the kinesin-like protein PAK has an Armadillo motif tail and is involved in guard cell development in Arabidopsis (from Genbank record AF159052).However, no defect in stomatal complexes has been observed in loss of function mutations. It accumulates at the preprophase band (PPB) in a cell-cycle and microtubule-dependent manner and is most highly expressed in cells where the placement of the division plane (early embryogenesis, stomatal lineages) is critical."]
["AT2G13560","NAD-ME1",699.54,-0.35596,0.11267,-3.1593,1.5815E-3,0.0081783,"full_name=NAD-dependent malic enzyme 1. NAD-dependent malic enzyme 1. Encodes an NAD-dependent malic enzyme (NAD-ME) that does not act on oxaloacetate, indicating that it belongs to EC 1.1.1.39. It is a member of the alpha family of NAD-MEs in plants. It appears to function as a homodimer or as a heterodimer with the beta-type NAD-ME2 (At4g00570). NAD-ME1 transcript and protein levels are higher during the night than during the day.","AT5G27680","RECQSIM",20.339,-1.6398,0.47666,-3.4403,{"v":0.000581,"d":"5.81E-04"},0.0029106,"full_name=RECQ helicase SIM. RECQ helicase SIM. DNA helicase","AT3G22850",null,64.283,-1.1161,0.27041,-4.1275,{"v":3.67e-05,"d":"3.67E-05"},{"v":0.000178,"d":"1.78E-04"},"aluminum induced protein with YGL and LRDR motifs.","AT5G38850",null,32.204,2.0386,0.4391,4.6427,{"v":3.44e-06,"d":"3.44E-06"},{"v":1.61e-05,"d":"1.61E-05"},"Disease resistance protein (TIR-NBS-LRR class).","AT1G66070",null,173.14,0.60115,0.16938,3.5491,{"v":0.000387,"d":"3.87E-04"},0.0017688,"Translation initiation factor eIF3 subunit."]
["AT5G53210","SPCH",13.691,-2.0666,0.65488,-3.1557,1.6011E-3,0.0082678,"full_name=SPEECHLESS. basic helix-loop-helix (bHLH) DNA-binding superfamily protein. Encodes a basic helix-loop-helix (bHLH) transcription factor that is necessary and sufficient for the asymmetric divisions that establish the stomatal lineage in Arabidopsis thaliana. Expression of SPCH in young epidermal cells allows these cells to make asymmetric divisions. SPCH is a substrate of a kinase MPK3 and MPK6. Its transcript levels change after inducing MUTE expression in a mute background.","AT3G02360","PGD2",946.98,-0.34146,0.09938,-3.4359,{"v":0.000591,"d":"5.91E-04"},2.9543E-3,"6-phosphogluconate dehydrogenase family protein.","AT2G41220","GLU2",1778.7,-0.40965,0.099284,-4.1261,{"v":3.69e-05,"d":"3.69E-05"},{"v":0.000179,"d":"1.79E-04"},"full_name=glutamate synthase 2. glutamate synthase 2. Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression is most abundant in root.","AT4G09080","TOC75-IV",46.083,1.6966,0.3658,4.638,{"v":3.52e-06,"d":"3.52E-06"},{"v":1.65e-05,"d":"1.65E-05"},"full_name=translocon at the outer envelope membrane of chloroplasts 75-IV. Outer membrane OMP85 family protein. Component of the translocon outer membrane (TOC) complex. Forms the outer envelope translocation channel (beta-barrel). Plays a role in preprotein conductance. Imported into chloroplast. Knockout mutants have abnormal etioplasts.","AT2G16800","CGF2",581.3,0.35323,0.099646,3.5449,{"v":0.000393,"d":"3.93E-04"},0.0017949,"high-affinity nickel-transport family protein."]
["AT4G34000","ABF3",27.781,-1.2592,0.39912,-3.1551,0.0016047,0.00828,"full_name=abscisic acid responsive elements-binding factor 3. abscisic acid responsive elements-binding factor 3. Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.","AT2G38010","ATNCER2",114.4,-0.76897,0.22392,-3.4342,{"v":0.000594,"d":"5.94E-04"},0.0029713,"Neutral/alkaline non-lysosomal ceramidase.","AT3G08600",null,14.815,-2.634,0.63851,-4.1253,{"v":3.7e-05,"d":"3.70E-05"},{"v":0.000179,"d":"1.79E-04"},"transmembrane protein, putative (DUF1191).","AT3G52400","SYP122",14.664,-4.2199,0.90991,-4.6377,{"v":3.52e-06,"d":"3.52E-06"},{"v":1.65e-05,"d":"1.65E-05"},"full_name=syntaxin of plants 122. syntaxin of plants 122. syntaxin protein, involved in the negative regulation of defense pathways such as programmed cell death, salicylic acid signalling pathway, jasmonic acid signalling pathway","AT1G67430",null,1982.5,-0.29136,0.082257,-3.542,{"v":3.97E-4,"d":"3.97E-04"},1.8131E-3,"Ribosomal protein L22p/L17e family protein."]
["AT3G07570",null,129.22,0.60068,0.19049,3.1534,1.614E-3,0.0083177,"Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein.","AT1G73880","UGT89B1",46.96,1.0578,0.30843,3.4295,{"v":0.000605,"d":"6.05E-04"},0.0030184,"full_name=UDP-glucosyl transferase 89B1. UDP-glucosyl transferase 89B1.","AT5G51220",null,117.16,0.86458,0.20977,4.1215,{"v":3.76e-05,"d":"3.76E-05"},{"v":0.000182,"d":"1.82E-04"},"ubiquinol-cytochrome C chaperone family protein.","AT4G17520","HLN",503.29,0.69744,0.15052,4.6336,{"v":3.59e-06,"d":"3.59E-06"},{"v":1.68e-05,"d":"1.68E-05"},"Hyaluronan / mRNA binding family.","AT5G09270",null,109.52,0.72258,0.20425,3.5377,{"v":0.000404,"d":"4.04E-04"},1.8402E-3,"transmembrane protein."]
["AT3G03720","CAT4",311.01,0.4177,0.13253,3.1518,1.6228E-3,0.0083511,"full_name=cationic amino acid transporter 4. cationic amino acid transporter 4. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters.","AT4G00820","iqd17",73.387,-0.93738,0.27363,-3.4257,{"v":0.000613,"d":"6.13E-04"},0.0030572,"full_name=IQ-domain 17. IQ-domain 17.","AT2G24020","STIC2",196.2,-0.67714,0.16454,-4.1154,{"v":3.87e-05,"d":"3.87E-05"},{"v":0.000187,"d":"1.87E-04"},"Putative BCR, YbaB family COG0718.","AT1G76130","AMY2",243.11,-0.70047,0.1514,-4.6266,{"v":3.72E-6,"d":"3.72E-06"},{"v":1.74e-05,"d":"1.74E-05"},"full_name=alpha-amylase-like 2. alpha-amylase-like 2. alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative, strong similarity to alpha-amylase GI:7532799 from (Malus x domestica);contains Pfam profile PF00128: Alpha amylase, catalytic domain. Predicted to be secreted based on SignalP analysis.","AT4G08960",null,209.01,0.54986,0.15554,3.5351,{"v":4.08E-4,"d":"4.08E-04"},0.0018558,"phosphotyrosyl phosphatase activator (PTPA) family protein."]
["AT5G55200","MGE1",47.845,0.94926,0.30168,3.1466,0.0016517,0.0084853,"full_name=mitochondrial GrpE 1. Co-chaperone GrpE family protein.","AT5G22060","J2",283.79,0.49215,0.14379,3.4228,{"v":6.2E-4,"d":"6.20E-04"},0.0030847,"full_name=DNAJ homologue 2. DNAJ homologue 2. Co-chaperonin similar to E. coli DnaJ","AT2G31240",null,177.65,0.68907,0.16755,4.1127,{"v":3.91e-05,"d":"3.91E-05"},{"v":0.000189,"d":"1.89E-04"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT4G34670",null,1371.5,0.6864,0.14851,4.6218,{"v":3.8E-6,"d":"3.80E-06"},{"v":1.77E-5,"d":"1.77E-05"},"Ribosomal protein S3Ae.","AT5G60160","DAP1",534.13,-0.43009,0.12182,-3.5306,{"v":4.15E-4,"d":"4.15E-04"},0.0018845,"Zn-dependent exopeptidases superfamily protein."]
["AT5G49320",null,86.297,0.72601,0.23088,3.1446,0.0016633,0.0085327,"transmembrane protein, putative (DUF1218).","AT4G00360","CYP86A2",528.05,0.4188,0.12241,3.4213,{"v":0.000623,"d":"6.23E-04"},0.0030974,"full_name=cytochrome P450, family 86, subfamily A, polypeptide 2. cytochrome P450, family 86, subfamily A, polypeptide 2. Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems.","AT2G13560","NAD-ME1",387.97,-0.57752,0.14053,-4.1096,{"v":3.96E-5,"d":"3.96E-05"},{"v":0.000191,"d":"1.91E-04"},"full_name=NAD-dependent malic enzyme 1. NAD-dependent malic enzyme 1. Encodes an NAD-dependent malic enzyme (NAD-ME) that does not act on oxaloacetate, indicating that it belongs to EC 1.1.1.39. It is a member of the alpha family of NAD-MEs in plants. It appears to function as a homodimer or as a heterodimer with the beta-type NAD-ME2 (At4g00570). NAD-ME1 transcript and protein levels are higher during the night than during the day.","AT1G67700","HHL1",93.278,1.0625,0.22996,4.6203,{"v":3.83e-06,"d":"3.83E-06"},{"v":1.78e-05,"d":"1.78E-05"},"multidrug resistance protein.","AT3G15470",null,194.66,0.58586,0.16616,3.5259,{"v":0.000422,"d":"4.22E-04"},0.0019156,"Transducin/WD40 repeat-like superfamily protein."]
["AT1G03080","NET1D",342.59,-0.41425,0.13202,-3.1377,0.0017026,0.0087146,"full_name=Networked 1D. kinase interacting (KIP1-like) family protein.","AT5G05210",null,259.67,0.51324,0.15018,3.4174,{"v":0.000632,"d":"6.32E-04"},0.0031341,"Surfeit locus protein 6.","AT5G41040","RWP1",1269,-0.6297,0.15346,-4.1034,{"v":4.07E-5,"d":"4.07E-05"},{"v":0.000196,"d":"1.96E-04"},"full_name=REDUCED LEVELS OF WALL-BOUND PHENOLICS 1. HXXXD-type acyl-transferase family protein. Encodes a feruloyl-CoA transferase required for suberin synthesis. Has feruloyl-CoA-dependent feruloyl transferase activity towards substrates with a primary alcohol.","AT4G38780",null,244.91,0.76088,0.16489,4.6145,{"v":3.94e-06,"d":"3.94E-06"},{"v":1.83e-05,"d":"1.83E-05"},"pre-mRNA-processing-splicing factor-like protein.","AT2G17036","ATFDA12",16.935,2.0105,0.57074,3.5227,{"v":0.000427,"d":"4.27E-04"},0.0019346,"F-box SKIP23-like protein (DUF295)."]
["AT1G28960","NUDX15",229.38,-0.47374,0.15108,-3.1358,1.7139E-3,0.0087623,"full_name=nudix hydrolase homolog 15. nudix hydrolase homolog 15. Encodes a ppGpp pyrophosphohydrolase.","AT5G08390","KTN80.3",144.25,-0.64014,0.18741,-3.4157,{"v":0.000636,"d":"6.36E-04"},3.1508E-3,"Transducin/WD40 repeat-like superfamily protein.","AT4G33980","COR28",346.92,0.60579,0.14776,4.0999,{"v":4.13e-05,"d":"4.13E-05"},{"v":0.000198,"d":"1.98E-04"},"hypothetical protein.","AT4G26580",null,7.1438,-6.4517,1.3985,-4.6134,{"v":3.96e-06,"d":"3.96E-06"},{"v":1.84E-5,"d":"1.84E-05"},"RING/U-box superfamily protein.","AT5G60840",null,42.701,-1.152,0.32716,-3.5211,{"v":0.00043,"d":"4.30E-04"},0.0019438,"hypothetical protein."]
["AT4G04810","MSRB4",110.52,-0.77631,0.24774,-3.1336,0.0017267,0.0088152,"full_name=methionine sulfoxide reductase B4. methionine sulfoxide reductase B4.","AT5G62370",null,25.194,1.4194,0.41625,3.4101,{"v":0.000649,"d":"6.49E-04"},0.0032118,"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT5G46295",null,37.277,1.5333,0.37446,4.0947,{"v":4.23e-05,"d":"4.23E-05"},{"v":2.03E-4,"d":"2.03E-04"},"transmembrane protein.","AT3G23580","RNR2A",471.26,-0.50484,0.10961,-4.6059,{"v":4.11e-06,"d":"4.11E-06"},{"v":1.9e-05,"d":"1.90E-05"},"full_name=ribonucleotide reductase 2A. ribonucleotide reductase 2A. Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes (RNR2A). Functionally redundant with the ribonucleotide reductase TSO2. mRNA was shown to specifically accumulate during the S-phase of the cell cycle in synchronized tobacco BY2 cells. Critical for cell cycle progression, DNA damage repair and plant development.","AT4G33280",null,76.265,-0.99023,0.2814,-3.5189,{"v":0.000433,"d":"4.33E-04"},0.0019574,"AP2/B3-like transcriptional factor family protein."]
["AT5G43330","c-NAD-MDH2",306.3,-0.44546,0.14226,-3.1314,1.7399E-3,0.0088678,"full_name=cytosolic-NAD-dependent malate dehydrogenase 2. Lactate/malate dehydrogenase family protein. predicted to encode a cytosolic malate dehydrogenase.","AT3G49320",null,43.554,1.0793,0.31676,3.4071,{"v":0.000656,"d":"6.56E-04"},0.0032411,"Metal-dependent protein hydrolase.","AT4G20980",null,426.53,0.5452,0.13334,4.0888,{"v":4.34e-05,"d":"4.34E-05"},{"v":0.000208,"d":"2.08E-04"},"Eukaryotic translation initiation factor 3 subunit 7 (eIF-3).","AT5G16560","KAN",56.393,-1.3849,0.30109,-4.5997,{"v":4.23e-06,"d":"4.23E-06"},{"v":1.96e-05,"d":"1.96E-05"},"full_name=KANADI. Homeodomain-like superfamily protein. Encodes a KANADI protein (KAN) that regulates organ polarity in Arabidopsis. KAN is required for abaxial identity in both leaves and carpels, and encodes a nuclear-localized protein in the GARP family of putative transcription factors. Together with KAN2, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN2 and KAN4, KAN1 appears to be required for proper regulation of PIN1 in early embryogenesis.","AT2G19800","MIOX2",23.38,2.1507,0.61194,3.5146,{"v":0.00044,"d":"4.40E-04"},1.9862E-3,"full_name=myo-inositol oxygenase 2. myo-inositol oxygenase 2. Encodes a myo-inositol oxygenase family gene."]
["AT5G13600",null,17.448,-1.7357,0.55464,-3.1294,0.0017517,0.0089149,"Phototropic-responsive NPH3 family protein.","AT4G23790","TBL24",54.246,-0.96126,0.28228,-3.4054,{"v":0.000661,"d":"6.61E-04"},3.2567E-3,"full_name=TRICHOME BIREFRINGENCE-LIKE 24. TRICHOME BIREFRINGENCE-LIKE 24. Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT1G75200",null,207.75,0.74777,0.18291,4.0882,{"v":4.35E-5,"d":"4.35E-05"},{"v":0.000208,"d":"2.08E-04"},"flavodoxin family protein / radical SAM domain-containing protein.","AT1G51520",null,52.591,1.4546,0.3164,4.5973,{"v":4.28e-06,"d":"4.28E-06"},{"v":1.98E-5,"d":"1.98E-05"},"RNA-binding (RRM/RBD/RNP motifs) family protein.","AT4G20920",null,80.295,-0.87379,0.24898,-3.5094,{"v":0.000449,"d":"4.49E-04"},2.0222E-3,"double-stranded RNA-binding domain (DsRBD)-containing protein."]
["AT5G52440","HCF106",68.515,-0.8069,0.25801,-3.1274,1.7633E-3,0.0089615,"full_name=HIGH CHLOROPHYLL FLUORESCENCE 106. Bacterial sec-independent translocation protein mttA/Hcf106. HCF106; nuclear gene for chloroplast. Thylakoid membrane delta pH translocation pathway component protein; related to Escherichia coli TatA and TatB","AT1G41830","SKS6",944.59,0.35708,0.10498,3.4015,{"v":0.00067,"d":"6.70E-04"},3.2997E-3,"full_name=SKU5-similar 6. SKU5-similar 6.","AT5G07250","RBL3",37.578,-1.5782,0.38626,-4.0859,{"v":4.39e-05,"d":"4.39E-05"},{"v":0.00021,"d":"2.10E-04"},"full_name=RHOMBOID-like protein 3. RHOMBOID-like protein 3.","AT1G33970","IAN9",505.1,0.50941,0.1109,4.5933,{"v":4.36e-06,"d":"4.36E-06"},{"v":2.01e-05,"d":"2.01E-05"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT5G51200","EMB3142",751.55,0.3628,0.10346,3.5065,{"v":0.000454,"d":"4.54E-04"},0.0020414,"full_name=EMBRYO DEFECTIVE 3142. nuclear pore complex protein (DUF3414)."]
["AT2G02230","PP2-B1",216.13,0.49417,0.15805,3.1267,1.7679E-3,0.00898,"full_name=phloem protein 2-B1. phloem protein 2-B1.","AT3G14360","ATOBL1",1103,-0.35044,0.10304,-3.4011,{"v":0.000671,"d":"6.71E-04"},0.0033023,"alpha/beta-Hydrolases superfamily protein.","AT1G72330","ALAAT2",214.29,0.70326,0.17216,4.085,{"v":4.41e-05,"d":"4.41E-05"},{"v":0.00021,"d":"2.10E-04"},"full_name=alanine aminotransferase 2. alanine aminotransferase 2. Encodes for alanine aminotransferase ALAAT2.","AT2G36910","ABCB1",136.39,-0.84571,0.18431,-4.5885,{"v":4.47e-06,"d":"4.47E-06"},{"v":2.06e-05,"d":"2.06E-05"},"full_name=ATP-binding cassette B1. ATP binding cassette subfamily B1. Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR1.Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AT3G28860. PGP1 mediates cellular efflux of IAA and interacts with PIN genes that may confer an accelerated vectoral component to PGP-mediated transport. The non-polar localization of PGP1 at root and shoot apices, where IAA gradient-driven transport is impaired, may be required to confer directionality to auxin transport in those tissues.","AT3G59920","GDI2",448.2,-0.39165,0.11173,-3.5054,{"v":0.000456,"d":"4.56E-04"},0.0020488,"full_name=RAB GDP dissociation inhibitor 2. RAB GDP dissociation inhibitor 2. RAB GDP DISSOCIATION INHIBITOR 2"]
["AT3G54040",null,6.0205,3.5742,1.1448,3.1221,0.0017956,0.0090947,"PAR1 protein.","AT4G00900","ECA2",213.83,0.53232,0.15675,3.3959,{"v":0.000684,"d":"6.84E-04"},0.0033561,"full_name=ER-type Ca2+-ATPase 2. ER-type Ca2+-ATPase 2. Type IIA (SERCA-type) Ca2+ ATPase, catalyzes the efflux of calcium from the cytoplasm.","AT5G42330",null,19.991,1.9363,0.47459,4.08,{"v":4.5e-05,"d":"4.50E-05"},{"v":2.14E-4,"d":"2.14E-04"},"hypothetical protein.","AT5G57970",null,23.779,-2.1189,0.46275,-4.579,{"v":4.67e-06,"d":"4.67E-06"},{"v":2.15e-05,"d":"2.15E-05"},"DNA glycosylase superfamily protein.","AT5G51070","ERD1",2004,-0.26102,0.07461,-3.4985,{"v":0.000468,"d":"4.68E-04"},0.002097,"full_name=EARLY RESPONSIVE TO DEHYDRATION 1. Clp ATPase. ATP-dependent Clp protease regulatory subunit"]
["AT5G27210","Cand8",122.53,0.59339,0.19008,3.1219,1.797E-3,0.0090991,"full_name=candidate G-protein Coupled Receptor 8. Protein of unknown function, transmembrane-40.","AT5G10050",null,140.88,-0.63702,0.1876,-3.3956,{"v":0.000685,"d":"6.85E-04"},3.359E-3,"NAD(P)-binding Rossmann-fold superfamily protein.","AT5G61880","PAM16L",154.36,0.77286,0.18944,4.0798,{"v":4.51e-05,"d":"4.51E-05"},{"v":2.14E-4,"d":"2.14E-04"},"Protein Transporter, Pam16.","AT1G68690","PERK9",181.48,-0.78904,0.17232,-4.5788,{"v":4.68e-06,"d":"4.68E-06"},{"v":2.15e-05,"d":"2.15E-05"},"full_name=proline-rich extensin-like receptor kinase 9. Protein kinase superfamily protein. Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807).","AT4G11740","SAY1",571.55,-0.33965,0.097094,-3.4981,{"v":0.000469,"d":"4.69E-04"},2.0991E-3,"Ubiquitin-like superfamily protein. Isolated as a suppressor of a dominant mutant in the Ara4 gene that was expressed in yeast ypt1 mutant strains. A novel protein with a small region of similarity to coil-coiled domain of yeast VSP27 protein."]
["AT3G54180","CDKB1;1",5.6808,-3.9773,1.2749,-3.1197,0.0018102,0.0091534,"full_name=cyclin-dependent kinase B1;1. cyclin-dependent kinase B1;1. Arabidopsis homolog of yeast cdc2, a protein kinase (cyclin-dependent kinase) that plays a central role in control of the mitotic cell cycle.","AT4G38650",null,6.7356,-4.1741,1.2304,-3.3924,{"v":0.000693,"d":"6.93E-04"},0.0033932,"Glycosyl hydrolase family 10 protein.","AT5G22320",null,151.6,0.7818,0.19189,4.0742,{"v":4.62e-05,"d":"4.62E-05"},{"v":0.000219,"d":"2.19E-04"},"Leucine-rich repeat (LRR) family protein.","AT4G30500",null,8.2166,-6.6394,1.4506,-4.5771,{"v":4.71e-06,"d":"4.71E-06"},{"v":2.16E-5,"d":"2.16E-05"},"transmembrane protein (DUF788).","AT4G21960","PRXR1",326.3,0.47514,0.13587,3.4971,{"v":0.00047,"d":"4.70E-04"},2.1045E-3,"Peroxidase superfamily protein. Encodes AT4g21960 (AT4g21960/T8O5_170)."]
["AT5G02790","GSTL3",450.69,-0.38283,0.12282,-3.1169,0.0018274,0.0092275,"full_name=Glutathione transferase L3. Glutathione S-transferase family protein.","AT1G07610","MT1C",129.61,0.63974,0.18873,3.3896,{"v":0.0007,"d":"7.00E-04"},0.0034232,"full_name=metallothionein 1C. metallothionein 1C. one of the five metallothioneins (MTs) genes identified in Arabidopsis. MTs are cysteine-rich proteins required for heavy metal tolerance.","AT2G29995",null,32.224,-1.5326,0.37651,-4.0705,{"v":4.69e-05,"d":"4.69E-05"},{"v":2.22E-4,"d":"2.22E-04"},"PSY3-like protein.","AT5G13950",null,471.83,0.56738,0.12405,4.5738,{"v":4.79e-06,"d":"4.79E-06"},{"v":2.2e-05,"d":"2.20E-05"},"nuclear factor kappa-B-binding protein.","AT1G14970",null,27.742,-1.6094,0.46033,-3.4961,{"v":0.000472,"d":"4.72E-04"},0.002109,"O-fucosyltransferase family protein."]
["AT3G15790","MBD11",788.68,0.33375,0.10717,3.1142,0.0018447,9.299E-3,"full_name=methyl-CPG-binding domain 11. methyl-CPG-binding domain 11. Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.","AT4G33920","APD5",241.83,0.5304,0.15666,3.3857,{"v":0.00071,"d":"7.10E-04"},0.0034674,"Protein phosphatase 2C family protein.","AT5G57260","CYP71B10",324.87,0.56892,0.1399,4.0666,{"v":4.77e-05,"d":"4.77E-05"},{"v":0.000226,"d":"2.26E-04"},"full_name=cytochrome P450, family 71, subfamily B, polypeptide 10. cytochrome P450, family 71, subfamily B, polypeptide 10. putative cytochrome P450","AT3G16330",null,11.962,-4.6586,1.0199,-4.5679,{"v":4.93e-06,"d":"4.93E-06"},{"v":2.25e-05,"d":"2.25E-05"},"Avr9/Cf-9 rapidly elicited protein.","AT3G07310",null,1024.5,-0.28407,0.081377,-3.4908,{"v":0.000482,"d":"4.82E-04"},0.0021483,"phosphoserine aminotransferase, putative (DUF760)."]
["AT5G02310","PRT6",588.33,0.3554,0.11425,3.1106,0.0018669,0.0093952,"full_name=proteolysis 6. proteolysis 6. Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.","AT5G14180","MPL1",71.429,-0.87877,0.25986,-3.3816,{"v":0.000721,"d":"7.21E-04"},0.0035127,"full_name=Myzus persicae-induced lipase 1. Myzus persicae-induced lipase 1.","AT1G62740","Hop2",560.46,0.55973,0.13769,4.0652,{"v":4.8e-05,"d":"4.80E-05"},{"v":0.000227,"d":"2.27E-04"},"full_name=Hop2. stress-inducible protein. Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","AT1G17290","AlaAT1",596.8,-0.48261,0.10575,-4.5639,{"v":5.02e-06,"d":"5.02E-06"},{"v":2.29e-05,"d":"2.29E-05"},"full_name=alanine aminotransferas. alanine aminotransferas. Encodes for alanine aminotransferase (ALAAT1), involved in alanine catabolism during plants recovery from hypoxia","AT5G51100","FSD2",233.45,-0.49143,0.14098,-3.4858,{"v":0.000491,"d":"4.91E-04"},0.002185,"full_name=Fe superoxide dismutase 2. Fe superoxide dismutase 2. Fe superoxide dismutase whose mRNA levels are increased in response to exposure to UV-B."]
["AT3G59910",null,455.2,0.39531,0.12716,3.1087,1.8794E-3,0.0094447,"Ankyrin repeat family protein.","AT1G04270","RPS15",1417,-0.33352,0.098707,-3.3789,{"v":0.000728,"d":"7.28E-04"},3.5431E-3,"full_name=cytosolic ribosomal protein S15. cytosolic ribosomal protein S15. Encodes cytosolic ribosomal protein S15.","AT3G62370",null,43.127,-1.5078,0.37128,-4.0611,{"v":4.88E-5,"d":"4.88E-05"},{"v":0.00023,"d":"2.30E-04"},"heme binding protein.","AT5G49680",null,39.492,-1.5408,0.33778,-4.5615,{"v":5.08e-06,"d":"5.08E-06"},{"v":2.32e-05,"d":"2.32E-05"},"SABRE-like protein. Conserved among eukaryotes, similar to Arabidopsis SABRE. The phenotype of the kip/sab double mutant suggests related functions for both genes, however, the KIP protein is mostly required for tip-growth. Predicted to be targeted to the secretory pathway. mRNA was detected in all organs, with most abundance in pollen and roots.","AT2G39140","SVR1",611.72,0.34596,0.099326,3.4831,{"v":0.000496,"d":"4.96E-04"},0.0022038,"full_name=SUPPRESSOR OF VARIEGATION 1. pseudouridine synthase family protein. Suppressor of var2 variegation phenotype. Chloroplast localized. Loss of function mutant has defects in chloroplast protein translation and rRNA processing. Similar in sequence to pseudouridine synthase proteins."]
["AT1G68510","LBD42",359.39,-0.47671,0.15348,-3.1061,1.8958E-3,0.0095112,"full_name=LOB domain-containing protein 42. LOB domain-containing protein 42.","AT4G33530","KUP5",70.818,-0.87305,0.25871,-3.3747,{"v":0.000739,"d":"7.39E-04"},0.0035917,"full_name=K+ uptake permease 5. K+ uptake permease 5. potassium transporter","AT2G35900",null,197.63,0.66974,0.16531,4.0515,{"v":5.09e-05,"d":"5.09E-05"},{"v":0.00024,"d":"2.40E-04"},"Mal d 1-associated protein.","AT4G16710",null,132.07,1.0455,0.22933,4.5591,{"v":5.14e-06,"d":"5.14E-06"},{"v":2.34E-5,"d":"2.34E-05"},"glycosyltransferase family protein 28.","AT3G01790",null,277.63,-0.8833,0.25395,-3.4783,{"v":0.000505,"d":"5.05E-04"},2.2399E-3,"Ribosomal protein L13 family protein."]
["AT5G13030","SELO",530.49,0.35794,0.11532,3.1039,0.0019101,0.0095695,"selenoprotein O.","AT3G57530","CPK32",233.74,0.50422,0.1495,3.3728,{"v":0.000744,"d":"7.44E-04"},3.6116E-3,"full_name=calcium-dependent protein kinase 32. calcium-dependent protein kinase 32. Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro","AT5G62790","DXR",512.33,-0.48978,0.12096,-4.0491,{"v":5.14e-05,"d":"5.14E-05"},{"v":2.42E-4,"d":"2.42E-04"},"full_name=1-deoxy-D-xylulose 5-phosphate reductoisomerase. 1-deoxy-D-xylulose 5-phosphate reductoisomerase. 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (DXR) catalyzes the first committed step of the 2-C-methyl-d-erythritol 4-phosphate pathway for isoprenoid biosynthesis. In Arabidopsis, DXR is encoded by a single-copy gene. Arabidopsis DXR is targeted to plastids and localizes into chloroplasts of leaf cells. DXR knockout or strongly silenced lines have a seedling lethal, albino phenotype. Transgenic, partially silenced lines expressing 35S:DXR have a variegated phenotype.","AT1G80700",null,46.961,1.5329,0.33653,4.5549,{"v":5.24e-06,"d":"5.24E-06"},{"v":2.38e-05,"d":"2.38E-05"},"stress response NST1-like protein.","AT3G12140","EML1",594.32,0.45979,0.13229,3.4756,{"v":0.00051,"d":"5.10E-04"},0.0022598,"full_name=EMSY-like 1. Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein."]
["AT2G32320","ICA2",258.5,0.45509,0.14679,3.1001,0.0019342,0.0096744,"tRNAHis guanylyltransferase.","AT2G04400","IGPS",260.92,0.49731,0.14757,3.37,{"v":0.000752,"d":"7.52E-04"},0.0036425,"Aldolase-type TIM barrel family protein.","AT4G08520",null,92.782,-0.92266,0.22808,-4.0453,{"v":5.23e-05,"d":"5.23E-05"},{"v":0.000245,"d":"2.45E-04"},"SNARE-like superfamily protein.","AT1G20090","ROP2",75.851,-1.1143,0.2449,-4.5501,{"v":5.36e-06,"d":"5.36E-06"},{"v":2.43e-05,"d":"2.43E-05"},"full_name=RHO-related protein from plants 2. RHO-related protein from plants 2. Member of the Rho GTPase family. Functions to organize the microtubular cytoskeleton in combination with RIC1 and RIC4. These interactions affect pavement cell morphogenesis and pollen tube growth. ROP2 expression is stimulated by brassinosteroid treatment. Inhibit light-induced stomatal opening.","AT2G38950",null,378.7,0.42521,0.12246,3.4722,{"v":0.000516,"d":"5.16E-04"},0.0022847,"Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein."]
["AT3G20230",null,102.01,-0.63938,0.20632,-3.099,0.0019419,0.009699,"Ribosomal L18p/L5e family protein.","AT5G03160","P58IPK",702.41,-0.382,0.11342,-3.3681,{"v":0.000757,"d":"7.57E-04"},0.0036627,"full_name=homolog of mamallian P58IPK. DnaJ P58IPK-like protein. J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast.","AT1G27760","SAT32",1345.4,0.45005,0.11133,4.0427,{"v":5.28e-05,"d":"5.28E-05"},{"v":0.000248,"d":"2.48E-04"},"full_name=SALT-TOLERANCE 32. interferon-related developmental regulator family protein / IFRD protein family. Encodes a protein with similarity to human interferon-related developmental regulator (IFRD)that is involved in salt tolerance. Loss of function mutations are hypersensitive to salt stress and have reduced fertility. SAT32 is found in the cytoplasm but appears to translocate to the nucleus when plants are subject to salt stress.","AT3G02230","RGP1",89.771,-1.0035,0.22075,-4.5458,{"v":5.47e-06,"d":"5.47E-06"},{"v":2.48E-5,"d":"2.48E-05"},"full_name=reversibly glycosylated polypeptide 1. reversibly glycosylated polypeptide 1. RGP1 is a UDP-arabinose mutase that catalyzes the interconversion between the pyranose and furanose forms of UDP-L-arabinose. It appears to be required for proper cell wall formation. rgp1/rgp2 (at5g15650) double mutants have a male gametophyte lethal phenotype. RGP1 fusion proteins can be found in the cytosol and peripherally associated with the Golgi apparatus.","AT1G30470",null,421.28,0.406,0.11706,3.4682,{"v":0.000524,"d":"5.24E-04"},2.3154E-3,"SIT4 phosphatase-associated family protein."]
["AT3G57570",null,299.41,0.42579,0.13758,3.0949,0.0019687,0.0098197,"ARM repeat superfamily protein.","AT2G32295",null,114.02,0.67664,0.20113,3.3642,{"v":0.000768,"d":"7.68E-04"},0.0037087,"EXS (ERD1/XPR1/SYG1) family protein.","AT5G03030",null,154.19,0.86889,0.21506,4.0402,{"v":5.34e-05,"d":"5.34E-05"},{"v":0.00025,"d":"2.50E-04"},"Chaperone DnaJ-domain superfamily protein.","AT5G07300","BON2",135.54,-0.89815,0.19762,-4.5449,{"v":5.5e-06,"d":"5.50E-06"},{"v":2.49e-05,"d":"2.49E-05"},"full_name=BONZAI 2. Calcium-dependent phospholipid-binding Copine family protein. Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms.","AT1G34000","OHP2",107.02,-0.75041,0.21672,-3.4627,{"v":0.000535,"d":"5.35E-04"},2.3606E-3,"full_name=one-helix protein 2. one-helix protein 2. Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions."]
["AT3G42860",null,42.19,0.98443,0.31833,3.0925,1.9846E-3,0.0098775,"zinc knuckle (CCHC-type) family protein.","AT4G22790","RHC1",208.93,0.57839,0.17206,3.3615,{"v":0.000775,"d":"7.75E-04"},0.0037385,"MATE efflux family protein. Encodes a plasma membrane localized MATE type transporter that is involved in CO2 signaling during stomatal aperture regulation. RHC1 regulates HT1 which phosphorylates OST1, a kinase that regulates the SLAC1 anion channel and thus stomatal closing.","AT5G04620","BIOF",44.912,-1.3024,0.32272,-4.0357,{"v":5.44e-05,"d":"5.44E-05"},{"v":0.000255,"d":"2.55E-04"},"full_name=biotin F. biotin F. The cDNA encoding 7-keto-8-aminopelargonic acid (KAPA) synthase, the first committed enzyme of the biotin synthesis pathway has been cloned and its molecular function confirmed (functional complementation of an E. coli mutant). The subcellular localization of the enzyme (cytosol) proves that the biotin biosynthesis in plants takes place in different compartments which differs from the biosynthetic route found in microorganisms.","AT2G02360","PP2-B10",90.984,-1.0415,0.22939,-4.54,{"v":5.62e-06,"d":"5.62E-06"},{"v":2.54e-05,"d":"2.54E-05"},"full_name=phloem protein 2-B10. phloem protein 2-B10. Encodes an F-box protein containing a Nictaba-related lectin domain that can act as a carbohydrate-binding protein.","AT3G01560","FLOE3",278.3,0.46215,0.13369,3.4569,{"v":0.000546,"d":"5.46E-04"},0.0024068,"proline-rich receptor-like kinase, putative (DUF1421)."]
["AT4G12080","AHL1",135.69,-0.58007,0.18771,-3.0903,0.0019996,9.9387E-3,"full_name=AT-hook motif nuclear-localized protein 1. AT-hook motif nuclear-localized protein 1.","AT2G28250","NCRK",47.756,-1.072,0.31915,-3.359,{"v":0.000782,"d":"7.82E-04"},3.7667E-3,"Protein kinase superfamily protein.","AT3G54920","PMR6",5.2699,-5.6715,1.4066,-4.032,{"v":5.53e-05,"d":"5.53E-05"},{"v":0.000258,"d":"2.58E-04"},"full_name=powdery mildew resistant 6. Pectin lyase-like superfamily protein. Powdery mildew resistant mutant encodes a pectate lyase-like protein","AT1G72280","ERO1",29.287,-1.9155,0.42208,-4.5381,{"v":5.68e-06,"d":"5.68E-06"},{"v":2.56e-05,"d":"2.56E-05"},"full_name=endoplasmic reticulum oxidoreductins 1. endoplasmic reticulum oxidoreductins 1. endoplasmic reticulum oxidoreductin","AT3G62910","APG3",92.39,0.79601,0.23052,3.4531,{"v":0.000554,"d":"5.54E-04"},0.002438,"full_name=ALBINO AND PALE GREEN. Peptide chain release factor 1. Encodes a plastid-localized ribosome release factor 1 that is essential in chloroplast development. Pale green, albino mutant seedlings arrest early in seedling development."]
["AT4G04470","PMP22",234.24,-0.4955,0.16034,-3.0903,0.0019998,9.9387E-3,"Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein. 22-kD peroxisomal membrane protein, an integral membrane protein embedded in the lipid bilayer.","AT4G25700","BETA-OHASE 1",272.46,0.54334,0.16179,3.3584,{"v":0.000784,"d":"7.84E-04"},0.0037749,"full_name=beta-hydroxylase 1. beta-hydroxylase 1. Converts beta-carotene to zeaxanthin via cryptoxanthin.","AT2G43720",null,71.455,0.97515,0.24192,4.031,{"v":5.56e-05,"d":"5.56E-05"},{"v":0.000259,"d":"2.59E-04"},"FAM136A-like protein (DUF842).","AT1G71940",null,87.18,-1.0414,0.22948,-4.5379,{"v":5.68e-06,"d":"5.68E-06"},{"v":2.56e-05,"d":"2.56E-05"},"SNARE associated Golgi protein family.","AT5G67260","CYCD3;2",82.554,0.84641,0.24512,3.453,{"v":0.000554,"d":"5.54E-04"},0.002438,"full_name=CYCLIN D3;2. CYCLIN D3;2. Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development."]
[{"$nulls":9},"AT5G65165","SDH2-3",2293.3,0.32339,0.096398,3.3547,{"v":0.000795,"d":"7.95E-04"},0.0038199,"full_name=succinate dehydrogenase 2-3. succinate dehydrogenase 2-3. One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Transcripts appear during seed maturation, persist through dessication, are abundant in dry seeds, and markedly decline during germination.","AT1G34760","GRF11",9.9493,3.7288,0.92532,4.0297,{"v":5.58e-05,"d":"5.58E-05"},{"v":0.00026,"d":"2.60E-04"},"full_name=general regulatory factor 11. general regulatory factor 11. Encodes a 14-3-3 protein. Binds H+-ATPase in response to blue light.","AT3G16000","MFP1",19.318,2.4871,0.54859,4.5337,{"v":5.8e-06,"d":"5.80E-06"},{"v":2.61e-05,"d":"2.61E-05"},"full_name=MAR binding filament-like protein 1. MAR binding filament-like protein 1. encodes a DNA-binding protein that binds to plastid DNA non-specifically and is associated with nucleoids and thylakoid membranes. The expression of the gene is correlated with the development of thylakoid membranes.","AT2G47250",null,808.57,-0.29713,0.086116,-3.4503,{"v":0.00056,"d":"5.60E-04"},0.0024591,"RNA helicase family protein."]
[{"$nulls":9},"AT5G19900",null,441.71,0.40644,0.12129,3.351,{"v":0.000805,"d":"8.05E-04"},0.0038665,"PRLI-interacting factor.","AT1G14300",null,165.57,0.69818,0.17339,4.0268,{"v":5.66E-5,"d":"5.66E-05"},{"v":2.63E-4,"d":"2.63E-04"},"ARM repeat superfamily protein.","AT5G55550",null,76.157,-1.0768,0.23766,-4.5307,{"v":5.88e-06,"d":"5.88E-06"},{"v":2.65E-5,"d":"2.65E-05"},"RNA-binding (RRM/RBD/RNP motifs) family protein.","AT3G08590","iPGAM2",162.45,0.65965,0.19132,3.4479,{"v":0.000565,"d":"5.65E-04"},0.0024777,"full_name=2,3-biphosphoglycerate-independent phosphoglycerate mutase 2. Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent. Encodes a 2,3-biphosphoglycerate-independent phosphoglycerate mutase that is involved in pollen development and stomatal movement."]
[{"$nulls":9},"AT2G19620","NDL3",27.029,-1.4099,0.42128,-3.3467,{"v":0.000818,"d":"8.18E-04"},0.0039192,"full_name=N-MYC downregulated-like 3. N-MYC downregulated-like 3.","AT1G05120",null,470.68,0.54827,0.13639,4.0197,{"v":5.83e-05,"d":"5.83E-05"},{"v":0.000271,"d":"2.71E-04"},"Helicase protein with RING/U-box domain-containing protein.","AT1G17050","SPS2",65.721,-1.1546,0.25507,-4.5267,{"v":5.99e-06,"d":"5.99E-06"},{"v":2.69E-5,"d":"2.69E-05"},"full_name=solanesyl diphosphate synthase 2. solanesyl diphosphate synthase 2. Encodes one of the two paralogous solanesyl diphosphate synthases - SPS1 (At1g78510) and SPS2 (At1g17050) - that assemble the side-chain of plastoquinone-9 in plastids.","AT5G50320","ELO3",683.6,0.3563,0.1034,3.446,{"v":0.000569,"d":"5.69E-04"},0.0024905,"full_name=ELONGATA 3. radical SAM domain-containing protein / GCN5-related N-acetyltransferase (GNAT) family protein. A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1%E2%80%93ELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate. Two lines with RNAi constructs directed against HAG3 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation."]
[{"$nulls":9},"AT1G54990","AXR4",162.89,0.60621,0.18124,3.3448,{"v":0.000824,"d":"8.24E-04"},0.003942,"full_name=AUXIN RESISTANT 4. alpha/beta-Hydrolases superfamily protein. auxin response mutant (AXR4)","AT3G07730",null,25.937,-1.7524,0.43621,-4.0174,{"v":5.88e-05,"d":"5.88E-05"},{"v":0.000273,"d":"2.73E-04"},"hypothetical protein.","AT1G32410",null,114.39,-0.91831,0.20297,-4.5243,{"v":6.06e-06,"d":"6.06E-06"},{"v":2.72E-5,"d":"2.72E-05"},"Vacuolar protein sorting 55 (VPS55) family protein.","AT3G11400","EIF3G1",1000.4,-0.30269,0.087894,-3.4438,{"v":0.000574,"d":"5.74E-04"},0.002508,"full_name=eukaryotic translation initiation factor 3G1. eukaryotic translation initiation factor 3G1. One of the 2 genes that code for the G subunit of eukaryotic initiation factor 3 (EIF3)."]
[{"$nulls":9},"AT5G67630","ISE4",160.08,0.59256,0.17737,3.3408,{"v":0.000835,"d":"8.35E-04"},0.0039919,"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT2G05580",null,178090,0.82765,0.20624,4.0131,{"v":5.99e-05,"d":"5.99E-05"},{"v":0.000278,"d":"2.78E-04"},"Glycine-rich protein family.","AT1G20350","TIM17-1",10.856,-4.5644,1.0099,-4.5196,{"v":6.19E-6,"d":"6.19E-06"},{"v":2.77e-05,"d":"2.77E-05"},"full_name=translocase inner membrane subunit 17-1. translocase inner membrane subunit 17-1. mitochondrial inner membrane translocase","AT5G03610",null,42.711,-1.1326,0.32912,-3.4413,{"v":0.000579,"d":"5.79E-04"},0.0025266,"GDSL-like Lipase/Acylhydrolase superfamily protein."]
[{"$nulls":9},"AT4G13670","PTAC5",28.939,-1.2861,0.38518,-3.3388,{"v":0.000841,"d":"8.41E-04"},0.0040138,"full_name=plastid transcriptionally active 5. plastid transcriptionally active 5.","AT2G43150","EXT21",51.286,-1.2527,0.31281,-4.0047,{"v":6.21e-05,"d":"6.21E-05"},{"v":0.000287,"d":"2.87E-04"},"Proline-rich extensin-like family protein.","AT5G47180",null,13.418,-3.3964,0.75173,-4.518,{"v":6.24e-06,"d":"6.24E-06"},{"v":2.79e-05,"d":"2.79E-05"},"Plant VAMP (vesicle-associated membrane protein) family protein.","AT2G01710","SDJ2",297.99,0.45189,0.13153,3.4357,{"v":0.000591,"d":"5.91E-04"},0.0025758,"Chaperone DnaJ-domain superfamily protein."]
[{"$nulls":9},"AT3G28155",null,22.314,1.4901,0.44648,3.3374,{"v":0.000846,"d":"8.46E-04"},0.0040295,"hypothetical protein.","AT3G22104",null,48.948,-1.2162,0.30393,-4.0016,{"v":6.29e-05,"d":"6.29E-05"},{"v":0.000291,"d":"2.91E-04"},"Phototropic-responsive NPH3 family protein.","AT3G14770","SWEET2",25.383,-2.0048,0.44388,-4.5165,{"v":6.29e-06,"d":"6.29E-06"},{"v":2.81e-05,"d":"2.81E-05"},"Nodulin MtN3 family protein.","AT5G50410",null,109.83,-0.70753,0.20613,-3.4324,{"v":0.000598,"d":"5.98E-04"},0.0026036,"ribonucleoside-diphosphate reductase subunit beta."]
[{"$nulls":9},"AT5G18980",null,168.75,0.56647,0.16993,3.3336,{"v":0.000857,"d":"8.57E-04"},0.0040779,"ARM repeat superfamily protein.","AT2G40920",null,86.413,0.92379,0.23102,3.9988,{"v":6.37e-05,"d":"6.37E-05"},{"v":0.000294,"d":"2.94E-04"},"F-box and associated interaction domains-containing protein.","AT4G35570","HMGB5",917.64,0.59206,0.13126,4.5105,{"v":6.47e-06,"d":"6.47E-06"},{"v":2.88e-05,"d":"2.88E-05"},"full_name=high mobility group B5. high mobility group B5. Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Cannot be phosphorylated by CK2alpha.","AT1G60170","emb1220",802.51,0.31347,0.091426,3.4287,{"v":0.000606,"d":"6.06E-04"},0.0026347,"full_name=embryo defective 1220. pre-mRNA processing ribonucleoprotein binding region-containing protein. Encodes a splicing factor PRP31. Involved in transcriptional gene silencing and stress responses."]
[{"$nulls":9},"AT3G15480",null,668.35,-0.34272,0.10295,-3.329,{"v":0.000872,"d":"8.72E-04"},0.0041403,"fiber (DUF1218).","AT1G24280","G6PD3",127.14,-1.3396,0.33531,-3.995,{"v":6.47e-05,"d":"6.47E-05"},{"v":0.000298,"d":"2.98E-04"},"full_name=glucose-6-phosphate dehydrogenase 3. glucose-6-phosphate dehydrogenase 3. Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.","AT2G47950",null,7.1696,-6.4606,1.4328,-4.509,{"v":6.51e-06,"d":"6.51E-06"},{"v":2.9E-5,"d":"2.90E-05"},"myelin transcription factor-like protein.","AT2G47840","Tic20-II",260.67,-0.45885,0.134,-3.4241,{"v":0.000617,"d":"6.17E-04"},0.0026754,"full_name=translocon at the inner envelope membrane of chloroplasts 20-II. Uncharacterized conserved protein ycf60. Encodes a component of the TIC (translocon at the inner envelope membrane of chloroplasts) protein translocation machinery mediating the protein translocation across the inner envelope of plastids. The Arabidopsis genome encodes four Tic20 homologous proteins, AT1G04940(Tic20-I), AT2G47840(Tic20-II), AT4G03320(Tic20-IV) and AT5G55710(Tic20-V)."]
[{"$nulls":9},"AT1G72430","SAUR78",302.1,-0.665,0.19995,-3.3259,{"v":0.000881,"d":"8.81E-04"},0.0041802,"SAUR-like auxin-responsive protein family.","AT5G37350",null,292.97,0.59551,0.14918,3.9918,{"v":6.56e-05,"d":"6.56E-05"},{"v":0.000302,"d":"3.02E-04"},"Serine/threonine-protein kinase Rio1.","AT5G49360","BXL1",14.105,-3.4198,0.75864,-4.5078,{"v":6.55E-6,"d":"6.55E-06"},{"v":2.91e-05,"d":"2.91E-05"},"full_name=beta-xylosidase 1. beta-xylosidase 1. Encodes a bifunctional {beta}-D-xylosidase/{alpha}-L-arabinofuranosidase required for pectic arabinan modification. Located in the extracellular matrix. Gene is expressed specifically in tissues undergoing secondary wall thickening. This is a member of glycosyl hydrolase family 3 and has six other closely related members.","AT4G03250",null,93.047,-0.80096,0.23402,-3.4226,{"v":6.2E-4,"d":"6.20E-04"},0.0026876,"Homeodomain-like superfamily protein."]
[{"$nulls":9},"AT1G15160",null,514.54,-0.38705,0.11649,-3.3226,{"v":8.92E-4,"d":"8.92E-04"},0.0042231,"MATE efflux family protein.","AT1G68620",null,20.277,1.991,0.49954,3.9856,{"v":6.73e-05,"d":"6.73E-05"},{"v":0.000309,"d":"3.09E-04"},"alpha/beta-Hydrolases superfamily protein.","AT5G35530",null,843.62,0.67068,0.14889,4.5046,{"v":6.65e-06,"d":"6.65E-06"},{"v":2.95e-05,"d":"2.95E-05"},"Ribosomal protein S3 family protein.","AT1G75190",null,9.492,2.8822,0.84319,3.4182,{"v":0.00063,"d":"6.30E-04"},2.7258E-3,"hypothetical protein."]
[{"$nulls":9},"AT3G63500","TTA2",734.78,0.3433,0.1034,3.3202,{"v":0.0009,"d":"9.00E-04"},0.004252,"full_name=TITANIA 2. fibronectin type III domain protein (DUF1423). Encodes a PHD-finger protein that, with TTA2, is redundantly required for MP-dependent embryonic root meristem initiation.","AT1G69600","ZFHD1",107.41,-0.89368,0.22447,-3.9813,{"v":6.85e-05,"d":"6.85E-05"},3.1424000000000003E-4,"full_name=zinc finger homeodomain 1. zinc finger homeodomain 1. Encodes ZFHD1, a member of the zinc finger homeodomain transcriptional factor family. Binds to the 62 bp promoter region of ERD1 (early responsive to dehydration stress 1). Expression of ZFHD1 is induced by drought, high salinity and abscisic acid.","AT1G51430",null,146.42,0.8606,0.19122,4.5005,{"v":6.78e-06,"d":"6.78E-06"},{"v":3e-05,"d":"3.00E-05"},"cTAGE family protein.","AT5G11090",null,447.51,0.44948,0.13163,3.4147,{"v":6.38E-4,"d":"6.38E-04"},0.0027573,"serine-rich protein-like protein."]
[{"$nulls":9},"AT3G26340",null,157.56,0.56986,0.17164,3.3202,{"v":0.0009,"d":"9.00E-04"},0.004252,"N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein.","AT2G43490",null,78.881,-0.95364,0.23956,-3.9808,{"v":6.87e-05,"d":"6.87E-05"},{"v":0.000315,"d":"3.15E-04"},"Ypt/Rab-GAP domain of gyp1p superfamily protein.","AT3G13750","BGAL1",11.532,-3.8915,0.86482,-4.4998,{"v":6.8e-06,"d":"6.80E-06"},{"v":3.01E-5,"d":"3.01E-05"},"full_name=beta galactosidase 1. beta galactosidase 1. beta-galactosidase, glycosyl hydrolase family 35","AT3G27010","TCP20",118.36,0.72097,0.21118,3.4141,{"v":0.00064,"d":"6.40E-04"},0.0027632,"full_name=TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20. TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20. Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes."]
[{"$nulls":9},"AT5G56950","NAP1;3",260.11,-0.47467,0.14318,-3.3152,{"v":0.000916,"d":"9.16E-04"},0.0043229,"full_name=nucleosome assembly protein 1;3. nucleosome assembly protein 1;3. Encodes a member of a small gene family of proteins with similarity to nucleosome assembly proteins.May function in nucleotide excision repair. Loss of function mutations have no obvious visible phenotypes but do seem to affect transcription of NER related genes.","AT4G30750",null,317.08,0.54516,0.13718,3.974,{"v":7.07e-05,"d":"7.07E-05"},{"v":0.000323,"d":"3.23E-04"},"hypothetical protein.","AT5G10060",null,328.04,0.59652,0.13274,4.4939,{"v":6.99E-6,"d":"6.99E-06"},{"v":3.09e-05,"d":"3.09E-05"},"ENTH/VHS family protein.","AT3G27260","GTE8",870.36,-0.42387,0.12423,-3.4121,{"v":0.000645,"d":"6.45E-04"},0.0027798,"full_name=global transcription factor group E8. global transcription factor group E8. Kinase like protein with similarity to yeast BDF1 and human RING3 protein, which have two bromodomains GTE8 has a single bromodomain"]
[{"$nulls":9},"AT5G08570",null,1434.3,0.29687,0.089621,3.3125,{"v":0.000925,"d":"9.25E-04"},0.0043594,"Pyruvate kinase family protein.","AT4G09510","CINV2",5.2838,-5.6813,1.4299,-3.9732,{"v":7.09e-05,"d":"7.09E-05"},{"v":0.000324,"d":"3.24E-04"},"full_name=cytosolic invertase 2. cytosolic invertase 2. CINV2 appears to function as a neutral invertase based on the phenotype of a cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues.","AT3G06360","AGP27",11.569,-5.2235,1.1638,-4.4882,{"v":7.18e-06,"d":"7.18E-06"},{"v":3.17e-05,"d":"3.17E-05"},"full_name=arabinogalactan protein 27. arabinogalactan protein 27. Encodes an arabinogalactan-protein (AGP27).","AT4G31270","IDAP2",717.1,-0.35724,0.10484,-3.4074,{"v":0.000656,"d":"6.56E-04"},0.0028237,"sequence-specific DNA binding transcription factor."]
[{"$nulls":9},"AT5G42570",null,487.78,0.42699,0.12913,3.3067,{"v":0.000944,"d":"9.44E-04"},4.4408E-3,"B-cell receptor-associated 31-like protein.","AT4G28190","ULT1",10.249,-4.1048,1.0347,-3.9671,{"v":7.28e-05,"d":"7.28E-05"},{"v":0.000332,"d":"3.32E-04"},"full_name=ULTRAPETALA1. Developmental regulator, ULTRAPETALA. Encodes a novel Cys-rich protein with a B-box like domain that acts as a negative regulator of meristem cell accumulation in inflorescence and floral meristems as loss-of-function ult1 mutations cause inflorescence meristem enlargement, the production of extra flowers and floral organs, and a decrease in floral meristem determinacy. Acts opposite to CLF which represses AG, but preventing deposition of CLF repressive methylation marks.","AT4G34910",null,240.14,0.69847,0.15587,4.4811,{"v":7.43E-6,"d":"7.43E-06"},{"v":3.27e-05,"d":"3.27E-05"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT4G21100","DDB1B",381.46,0.40604,0.11928,3.4041,{"v":0.000664,"d":"6.64E-04"},0.0028523,"full_name=damaged DNA binding protein 1B. damaged DNA binding protein 1B. One of two closely related genes similar to a damaged DNA binding protein originally described in mammals. May form a complex with DET1 to regulate photomorphogenesis. Loss of function mutations are lethal. The DDB1b protein binds with a number of DWD-containing proteins and may form part of a CUL4-based E3 ubiquitin ligase."]
[{"$nulls":9},"AT5G41870",null,226.58,-0.50999,0.15438,-3.3034,{"v":0.000955,"d":"9.55E-04"},0.0044878,"Pectin lyase-like superfamily protein.","AT5G44210","ERF9",14.275,-2.5801,0.65095,-3.9636,{"v":7.38e-05,"d":"7.38E-05"},{"v":0.000336,"d":"3.36E-04"},"full_name=erf domain protein 9. erf domain protein 9. encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.","AT2G29650","PHT4;1",135.68,-0.8349,0.18654,-4.4758,{"v":7.61E-6,"d":"7.61E-06"},{"v":3.35e-05,"d":"3.35E-05"},"full_name=phosphate transporter 4;1. phosphate transporter 4;1. Encodes an inorganic phosphate transporter (PHT4;1) that is localized to the thylakoid membrane.","AT1G09640",null,1605.3,0.25556,0.075175,3.3996,{"v":0.000675,"d":"6.75E-04"},0.0028959,"Translation elongation factor EF1B, gamma chain."]
[{"$nulls":9},"AT5G02020","SIS",210.38,0.66623,0.20194,3.2991,{"v":0.00097,"d":"9.70E-04"},0.004552,"full_name=Salt Induced Serine rich. E3 ubiquitin-protein ligase RLIM-like protein. Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).","AT2G41380",null,121.94,-0.83818,0.21154,-3.9623,{"v":7.42e-05,"d":"7.42E-05"},{"v":0.000338,"d":"3.38E-04"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT3G24160","PMP",636.04,-0.5165,0.11554,-4.4702,{"v":7.81e-06,"d":"7.81E-06"},{"v":3.44e-05,"d":"3.44E-05"},"full_name=putative type 1 membrane protein. putative type 1 membrane protein. Encodes a putative Type 1 membrane protein (PMP).","AT3G05630","PLDP2",131.57,-0.64512,0.18985,-3.3981,{"v":0.000679,"d":"6.79E-04"},2.9088E-3,"full_name=phospholipase D P2. phospholipase D P2. Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. Regulates vesicle trafficking. Required for auxin transport and distribution and hence auxin responses. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Plays a major role in phosphatidic acid production during phosphate deprivation. Induced upon Pi starvation in both shoots and roots. Involved in hydrolyzing phosphatidylcholine and phosphatidylethanolamine to produce diacylglycerol for digalactosyldiacylglycerol synthesis and free Pi to sustain other Pi-requiring processes. Does not appear to be involved in root hair patterning. Expression is upregulated in the shoot of cax1/cax3 mutant and is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots."]
[{"$nulls":9},"AT1G49430","LACS2",272.75,-0.48508,0.14723,-3.2948,{"v":0.000985,"d":"9.85E-04"},0.0046145,"full_name=long-chain acyl-CoA synthetase 2. long-chain acyl-CoA synthetase 2. Encodes a long chain acyl-CoA synthetase that catalyzes the synthesis of omega-hydroxy fatty acyl-CoA intermediates in the pathway to cutin synthesis. Required for repression of lateral root formation.","AT2G31985",null,208.79,0.65179,0.16458,3.9603,{"v":7.48e-05,"d":"7.48E-05"},{"v":0.00034,"d":"3.40E-04"},"lipoprotein (DUF1264).","AT1G53170","ERF8",17.255,-2.5362,0.56774,-4.4671,{"v":7.93e-06,"d":"7.93E-06"},{"v":3.48e-05,"d":"3.48E-05"},"full_name=ethylene response factor 8. ethylene response factor 8. encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-8). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.","AT3G53710","AGD6",211.86,0.50732,0.14938,3.3961,{"v":0.000684,"d":"6.84E-04"},0.0029244,"full_name=ARF-GAP domain 6. ARF-GAP domain 6. A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes."]
[{"$nulls":9},"AT2G29490","GSTU1",3.4545,5.2781,1.603,3.2926,{"v":0.000993,"d":"9.93E-04"},0.0046451,"full_name=glutathione S-transferase TAU 1. glutathione S-transferase TAU 1. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","AT1G75270","DHAR2",61.813,-1.052,0.2657,-3.9591,{"v":7.52e-05,"d":"7.52E-05"},{"v":0.000341,"d":"3.41E-04"},"full_name=dehydroascorbate reductase 2. dehydroascorbate reductase 2.","AT5G37720","ALY4",531.35,0.48134,0.10785,4.4629,{"v":8.09e-06,"d":"8.09E-06"},{"v":3.55e-05,"d":"3.55E-05"},"full_name=ALWAYS EARLY 4. ALWAYS EARLY 4.","AT4G23040",null,260.37,0.48854,0.14388,3.3956,{"v":0.000685,"d":"6.85E-04"},2.9264E-3,"Ubiquitin-like superfamily protein."]
[{"$nulls":9},"AT1G73210",null,1359.8,-0.35683,0.1085,-3.2888,0.0010063,0.0047006,"hypothetical protein (DUF789).","AT5G04660","CYP77A4",105.36,-1.0379,0.26258,-3.9526,{"v":7.73e-05,"d":"7.73E-05"},{"v":3.5E-4,"d":"3.50E-04"},"full_name=cytochrome P450, family 77, subfamily A, polypeptide 4. cytochrome P450, family 77, subfamily A, polypeptide 4. encodes a protein with cytochrome P450 domain","AT3G58690",null,67.641,-1.2183,0.2733,-4.4575,{"v":8.29e-06,"d":"8.29E-06"},{"v":3.63e-05,"d":"3.63E-05"},"Protein kinase superfamily protein.","AT5G01760",null,12.243,2.5168,0.74256,3.3893,{"v":0.000701,"d":"7.01E-04"},0.0029896,"ENTH/VHS/GAT family protein."]
[{"$nulls":9},"AT5G62720","ATNITR2;1",24.324,1.4776,0.45012,3.2826,1.0287E-3,0.004796,"Integral membrane HPP family protein.","AT2G06005","FIP1",353.84,0.55564,0.14074,3.948,{"v":7.88e-05,"d":"7.88E-05"},{"v":0.000356,"d":"3.56E-04"},"full_name=FRIGIDA interacting protein 1. FRIGIDA interacting protein 1. Encodes one of the FRI interacting proteins: FRIGIDA INTERACTING PROTEIN 1 (FIP1)/At2g06005, FIP2/ At4g17060. FRI (At4G00650) is a major determinant of natural variation in Arabidopsis flowering time.","AT4G02120","CTPS3",6.4014,-6.2874,1.4118,-4.4536,{"v":8.44e-06,"d":"8.44E-06"},{"v":3.69e-05,"d":"3.69E-05"},"CTP synthase family protein.","AT1G22180",null,214.55,-0.5122,0.15119,-3.3877,{"v":0.000705,"d":"7.05E-04"},0.0030012,"Sec14p-like phosphatidylinositol transfer family protein."]
[{"$nulls":9},"AT1G63970","ISPF",188.4,0.52644,0.16046,3.2807,1.0355E-3,0.0048226,"full_name=isoprenoid F. isoprenoid F. Encodes a protein with 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity. The protein's activity was confirmed by heterologous expression of phenotypic complementation of the E. coli ispF mutant. Plants defective in this gene display an albino lethal phenotype.Homolog of E. coli IspF","AT3G23760",null,5.4998,-5.74,1.4563,-3.9415,{"v":8.1e-05,"d":"8.10E-05"},{"v":0.000366,"d":"3.66E-04"},"transferring glycosyl group transferase.","AT5G27350","SFP1",46.803,-2.2726,0.51077,-4.4495,{"v":8.61e-06,"d":"8.61E-06"},{"v":3.76e-05,"d":"3.76E-05"},"Major facilitator superfamily protein. Encodes a sugar-porter family protein that is induced during leaf senescence. The increase in its gene expression during leaf senescence is paralleled by an accumulation of monosaccharides.","AT4G36880","CP1",4.017,5.3038,1.5663,3.3862,{"v":0.000709,"d":"7.09E-04"},0.003015,"full_name=cysteine proteinase1. cysteine proteinase1."]
[{"$nulls":9},"AT3G26690","NUDX13",98.924,-0.79131,0.24145,-3.2773,1.0479E-3,4.8728E-3,"full_name=nudix hydrolase homolog 13. nudix hydrolase homolog 13. Encodes AtNUDT13, a mitochondrial Nudix hydrolase specific for long-chain diadenosine polyphosphates.","AT3G51850","CPK13",157.97,-0.69326,0.17608,-3.9371,{"v":8.25E-5,"d":"8.25E-05"},{"v":0.000372,"d":"3.72E-04"},"full_name=calcium-dependent protein kinase 13. calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase","AT5G27660","DEG14",176.8,0.75318,0.16945,4.4449,{"v":8.79e-06,"d":"8.79E-06"},{"v":3.83e-05,"d":"3.83E-05"},"full_name=degradation of periplasmic proteins 14. Trypsin family protein with PDZ domain-containing protein. Encodes a protein with similarity to human PARK13, a mitochondrial protease implicated in Parkinson disease. DEG14 is induced by heat stress and involved in degradation of misfolded proteins.","AT3G55460","SCL30",641.9,-0.33734,0.099675,-3.3844,{"v":0.000713,"d":"7.13E-04"},3.0298E-3,"full_name=SC35-like splicing factor 30. SC35-like splicing factor 30. encodes an SC35-like splicing factor that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926."]
[{"$nulls":9},"AT2G07340","PFD1",124.26,-0.70484,0.21534,-3.2731,0.0010637,0.0049396,"full_name=PREFOLDIN 1. PREFOLDIN 1.","AT1G69800",null,1635.1,0.72729,0.18484,3.9347,{"v":8.33e-05,"d":"8.33E-05"},{"v":0.000375,"d":"3.75E-04"},"Cystathionine beta-synthase (CBS) protein.","AT3G51970","ASAT1",20.409,-2.4423,0.55022,-4.4388,{"v":9.05e-06,"d":"9.05E-06"},{"v":3.94e-05,"d":"3.94E-05"},"full_name=acyl-CoA sterol acyl transferase 1. acyl-CoA sterol acyl transferase 1.","AT5G53660","GRF7",43.596,-1.1963,0.35386,-3.3806,{"v":0.000723,"d":"7.23E-04"},0.0030681,"full_name=growth-regulating factor 7. growth-regulating factor 7. Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower."]
[{"$nulls":9},"AT1G48300","DGAT3",1827.5,-0.28411,0.086828,-3.2721,1.0674E-3,0.0049503,"full_name=diacylglycerol acyltransferase 3. diacylglycerol acyltransferase.","AT1G79280","NUA",1081,0.51642,0.13136,3.9314,{"v":8.44e-05,"d":"8.44E-05"},{"v":0.00038,"d":"3.80E-04"},"full_name=nuclear pore anchor. nuclear pore anchor. Encodes a 237-kDA protein with similarity to vertebrate Tpr, a long coiled-coil proteins of nuclear pore inner basket filaments. It is localized to the inner surface of the nuclear envelope and is a component of the nuclear pore-associated steps of sumoylation and mRNA export in plants. Mutations affect flowering time regulation and other developmental processes. Probably acts in the same pathway as ESD4 in affecting flowering time, vegetative and inflorescence development.","AT3G07440",null,133.65,1.0064,0.22688,4.4359,{"v":9.17e-06,"d":"9.17E-06"},{"v":3.98e-05,"d":"3.98E-05"},"hypothetical protein.","AT2G43110",null,70.946,-0.86129,0.25496,-3.3782,{"v":0.00073,"d":"7.30E-04"},3.091E-3,"U3 containing 90S pre-ribosomal complex subunit."]
[{"$nulls":9},"AT3G44330",null,162.05,-0.55993,0.17113,-3.2719,1.0681E-3,0.0049522,"M28 Zn-peptidase nicastrin.","AT1G09580",null,57.77,-1.1349,0.28873,-3.9308,{"v":8.47e-05,"d":"8.47E-05"},{"v":0.000381,"d":"3.81E-04"},"emp24/gp25L/p24 family/GOLD family protein.","AT3G03320",null,565.08,-0.57246,0.12907,-4.4354,{"v":9.19e-06,"d":"9.19E-06"},{"v":3.99e-05,"d":"3.99E-05"},"RNA-binding ASCH domain protein.","AT3G51880","HMGB1",5418.2,-0.34277,0.10147,-3.3781,{"v":0.00073,"d":"7.30E-04"},0.0030914,"full_name=high mobility group B1. high mobility group B1. Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. In interphase cells, HMGB1 is found throughout the nucleus, whereas in mitotic cells it is not chromatin-associated."]
[{"$nulls":9},"AT1G21830",null,82.147,-0.75549,0.23112,-3.2688,1.08E-3,0.0049991,"hypothetical protein.","AT5G45280","PAE11",203.61,0.64829,0.16506,3.9275,{"v":8.58e-05,"d":"8.58E-05"},{"v":0.000385,"d":"3.85E-04"},"Pectinacetylesterase family protein.","AT2G48130","LTPG15",7.2657,-6.4755,1.4603,-4.4342,{"v":9.24e-06,"d":"9.24E-06"},{"v":4.01e-05,"d":"4.01E-05"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT1G07705","NOT2A",117.59,-0.66658,0.19751,-3.3749,{"v":0.000738,"d":"7.38E-04"},0.0031219,"NOT2 / NOT3 / NOT5 family."]
[{"$nulls":9},"AT4G23750","CRF2",30.729,1.2624,0.38656,3.2656,1.0922E-3,0.0050479,"full_name=cytokinin response factor 2. cytokinin response factor 2. encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Monopteros target gene.","AT4G02010",null,120.5,-0.78871,0.20101,-3.9238,{"v":8.72e-05,"d":"8.72E-05"},{"v":0.000391,"d":"3.91E-04"},"Protein kinase superfamily protein.","AT3G53740",null,1002.9,0.62144,0.14033,4.4286,{"v":9.49e-06,"d":"9.49E-06"},{"v":4.11e-05,"d":"4.11E-05"},"Ribosomal protein L36e family protein.","AT3G22560",null,15.092,-1.9228,0.57002,-3.3732,{"v":0.000743,"d":"7.43E-04"},0.0031369,"Acyl-CoA N-acyltransferases (NAT) superfamily protein."]
[{"$nulls":9},"AT1G60660","CB5LP",32.145,-1.191,0.36495,-3.2636,0.0011001,0.0050776,"full_name=cytochrome B5-like protein. cytochrome B5-like protein. member of Cytochromes b5","AT1G15460","BOR4",33.406,-1.5355,0.39173,-3.9198,{"v":8.86e-05,"d":"8.86E-05"},{"v":3.97E-4,"d":"3.97E-04"},"full_name=REQUIRES HIGH BORON 4. HCO3- transporter family. Encodes a efflux-type boron transporter. Over-expression improved plant growth under B toxic conditions.","AT3G57330","ACA11",6.7803,-6.3695,1.4388,-4.4271,{"v":9.55E-6,"d":"9.55E-06"},{"v":4.13e-05,"d":"4.13E-05"},"full_name=autoinhibited Ca2+-ATPase 11. autoinhibited Ca2+-ATPase 11. Lesion mimic phenotype when mutation in the gene is combined with a mutation in ACA4. Lesion mimic phenotype of double knockout can be suppressed by nutritional supplements that increase anion levels (e.g. 15 mM Nitrate, Chloride, or Phosphate)","AT2G46225","ABIL1",146.52,-0.608,0.18055,-3.3674,{"v":0.000759,"d":"7.59E-04"},3.199E-3,"full_name=ABI-1-like 1. ABI-1-like 1. Encodes a subunit of the WAVE complex. The WAVE complex is required for activation of ARP2/3 complex which functions in actin microfilament nucleation and branching. One of four ABI-like proteins."]
[{"$nulls":9},"AT3G01510","LSF1",6.5084,-3.6093,1.1071,-3.2601,0.0011138,0.0051337,"full_name=like SEX4 1. like SEX4 1. Encodes a putative phosphatase, LSF1, required for normal starch turnover in leaves.","AT2G47590","PHR2",114.2,-0.90987,0.23239,-3.9152,{"v":9.03e-05,"d":"9.03E-05"},{"v":0.000404,"d":"4.04E-04"},"full_name=photolyase/blue-light receptor 2. photolyase/blue-light receptor 2. photolyase/blue light photoreceptor PHR2 (PHR2) mRNA,","AT3G22850",null,24.86,-2.0733,0.46848,-4.4256,{"v":9.62e-06,"d":"9.62E-06"},{"v":4.16e-05,"d":"4.16E-05"},"aluminum induced protein with YGL and LRDR motifs.","AT2G03140",null,590.09,-0.35622,0.10584,-3.3655,{"v":0.000764,"d":"7.64E-04"},0.0032164,"alpha/beta-Hydrolases superfamily protein."]
[{"$nulls":9},"AT3G05750","TRM6",98.01,-0.69468,0.21334,-3.2562,1.129E-3,0.0051958,"full_name=TON1 Recruiting Motif 6. serine-rich adhesin for platelets-like protein.","AT2G17370","HMG2",161.51,-0.75435,0.19277,-3.9133,{"v":9.11e-05,"d":"9.11E-05"},{"v":4.06E-4,"d":"4.06E-04"},"full_name=3-hydroxy-3-methylglutaryl-CoA reductase 2. 3-hydroxy-3-methylglutaryl-CoA reductase 2. Encodes a 3-hydroxy-3-methylglutaryl-CoA reductase (HMGR) that is involved in the synthesis of sterol and triterpenoid compounds.","AT1G09900",null,79.195,1.0775,0.24372,4.4211,{"v":9.8200000000000008E-6,"d":"9.82E-06"},{"v":4.24e-05,"d":"4.24E-05"},"Pentatricopeptide repeat (PPR-like) superfamily protein.","AT1G66470","RHD6",13.759,2.2343,0.66454,3.3622,{"v":0.000773,"d":"7.73E-04"},0.0032503,"full_name=ROOT HAIR DEFECTIVE6. ROOT HAIR DEFECTIVE6."]
[{"$nulls":9},"AT1G14300",null,120.96,0.66043,0.20303,3.2528,1.1428E-3,5.2521E-3,"ARM repeat superfamily protein.","AT5G48570","ROF2",41.335,1.3378,0.34203,3.9113,{"v":9.18e-05,"d":"9.18E-05"},{"v":0.000409,"d":"4.09E-04"},"FKBP-type peptidyl-prolyl cis-trans isomerase family protein. Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","AT3G61040","CYP76C7",1322.1,0.57699,0.13064,4.4168,{"v":1e-05,"d":"1.00E-05"},{"v":4.32E-5,"d":"4.32E-05"},"full_name=cytochrome P450, family 76, subfamily C, polypeptide 7. cytochrome P450, family 76, subfamily C, polypeptide 7. encodes a protein with cytochrome P450 domain","AT1G32260",null,214.81,-0.49692,0.14799,-3.3578,{"v":0.000786,"d":"7.86E-04"},0.0032986,"envelope glycoprotein."]
[{"$nulls":9},"AT1G75710",null,87.996,-0.85803,0.26392,-3.251,0.0011498,0.0052789,"C2H2-like zinc finger protein.","AT1G25175",null,451.23,-0.87708,0.22439,-3.9086,{"v":9.28e-05,"d":"9.28E-05"},{"v":0.000413,"d":"4.13E-04"},null,"AT5G58200",null,232.66,0.72926,0.16519,4.4147,{"v":1.01E-5,"d":"1.01E-05"},{"v":4.35E-5,"d":"4.35E-05"},"Calcineurin-like metallo-phosphoesterase superfamily protein.","AT1G53800",null,152.49,0.62571,0.18645,3.3559,{"v":0.000791,"d":"7.91E-04"},0.0033177,"muscle M-line assembly protein."]
[{"$nulls":9},"AT3G58460","RBL15",448.43,-0.4115,0.12673,-3.247,1.1665E-3,0.0053442,"full_name=RHOMBOID-like protein 15. RHOMBOID-like protein 15.","AT5G66580",null,755.34,0.74546,0.19082,3.9066,{"v":9.36e-05,"d":"9.36E-05"},{"v":0.000416,"d":"4.16E-04"},"hypothetical protein.","AT1G72090",null,129.78,0.85258,0.19337,4.409,{"v":1.04E-5,"d":"1.04E-05"},{"v":4.46E-5,"d":"4.46E-05"},"Methylthiotransferase.","AT4G09560","RMR4",60.019,-0.90313,0.26951,-3.3511,{"v":0.000805,"d":"8.05E-04"},0.0033688,"Protease-associated (PA) RING/U-box zinc finger family protein."]
[{"$nulls":9},"AT3G27190","UKL2",272.6,-0.46065,0.14196,-3.2449,1.1749E-3,0.0053759,"full_name=uridine kinase-like 2. uridine kinase-like 2. One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.","AT4G02530","MPH2",19.058,-1.9647,0.50316,-3.9048,{"v":9.43e-05,"d":"9.43E-05"},{"v":0.000418,"d":"4.18E-04"},"chloroplast thylakoid lumen protein.","AT1G08500","ENODL18",16.474,-3.2179,0.73054,-4.4048,{"v":1.06E-5,"d":"1.06E-05"},{"v":4.54e-05,"d":"4.54E-05"},"full_name=early nodulin-like protein 18. early nodulin-like protein 18.","AT2G14960","GH3.1",19.997,1.6522,0.49352,3.3478,{"v":0.000815,"d":"8.15E-04"},0.0034043,"Auxin-responsive GH3 family protein. encodes a protein similar to IAA-amido synthases. Lines carrying an insertion in this gene are hypersensitive to auxin."]
[{"$nulls":9},"AT3G14075",null,219.97,0.49062,0.15126,3.2436,1.1802E-3,0.0053911,"Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3.","AT1G60690",null,62.055,-1.0872,0.27873,-3.9005,{"v":9.6e-05,"d":"9.60E-05"},{"v":0.000425,"d":"4.25E-04"},"NAD(P)-linked oxidoreductase superfamily protein.","AT4G10040","CYTC-2",473.64,-0.56181,0.12768,-4.4002,{"v":1.08E-5,"d":"1.08E-05"},{"v":4.63e-05,"d":"4.63E-05"},"full_name=cytochrome c-2. cytochrome c-2. Encodes cytochrome c. Promoter directs preferential expression in vascular tissues of cotyledons, leaves, roots, and hypocotyls, and in anthers.","AT1G31910",null,1018.3,0.2998,0.089593,3.3462,{"v":0.000819,"d":"8.19E-04"},0.0034176,"GHMP kinase family protein."]
[{"$nulls":9},"AT4G17610","TRM3",19.051,1.7985,0.55458,3.243,0.0011828,5.3964E-3,"tRNA/rRNA methyltransferase (SpoU) family protein.","AT1G80570",null,183.58,0.65955,0.1693,3.8957,{"v":9.79e-05,"d":"9.79E-05"},{"v":0.000433,"d":"4.33E-04"},"RNI-like superfamily protein.","AT2G03020",null,18.396,3.1282,0.71163,4.3958,{"v":1.1E-5,"d":"1.10E-05"},{"v":4.72e-05,"d":"4.72E-05"},"Heat shock protein HSP20/alpha crystallin family.","AT4G39460","SAMC1",222.3,-0.49913,0.14919,-3.3456,{"v":0.000821,"d":"8.21E-04"},0.0034211,"full_name=S-adenosylmethionine carrier 1. S-adenosylmethionine carrier 1. Encodes a plastid metabolite transporter required for the import of S-Adenosylmethionine from the cytosol. Impaired function of SAMT1 led to decreased accumulation of prenyllipids and mainly affected the chlorophyll pathway."]
[{"$nulls":9},"AT4G01250","WRKY22",92.087,0.71645,0.22114,3.2397,1.1964E-3,0.0054513,"WRKY family transcription factor. AtWRKY22 is a member of WRKY Transcription Factor; Group II-e. It is involved in regulation of dark induced leaf senescence.","AT1G22610","MCTP6",402.55,0.50688,0.13018,3.8935,{"v":9.88e-05,"d":"9.88E-05"},{"v":0.000436,"d":"4.36E-04"},"C2 calcium/lipid-binding plant phosphoribosyltransferase family protein.","AT4G14360",null,439.81,-0.78604,0.17889,-4.394,{"v":1.11E-5,"d":"1.11E-05"},{"v":4.75e-05,"d":"4.75E-05"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT2G43850","ILK1",19.298,-1.7481,0.52325,-3.341,{"v":0.000835,"d":"8.35E-04"},3.4746E-3,"Integrin-linked protein kinase family."]
[{"$nulls":9},"AT3G15920",null,301.38,0.43492,0.13433,3.2378,0.0012046,0.0054829,"Phox (PX) domain-containing protein.","AT1G04680",null,5.1171,-5.6359,1.448,-3.8921,{"v":9.94e-05,"d":"9.94E-05"},{"v":0.000438,"d":"4.38E-04"},"Pectin lyase-like superfamily protein.","AT5G02250","EMB2730",347.67,0.53807,0.12253,4.3915,{"v":1.13E-5,"d":"1.13E-05"},{"v":4.8e-05,"d":"4.80E-05"},"full_name=EMBRYO DEFECTIVE 2730. Ribonuclease II/R family protein. Encodes a exoribonuclease involved in rRNA processing in mitochondria and chloroplasts.Loss of function mutations are pale green and require supplementation with sucrose for germination and early development. Plants are pale green due to defects in chloroplast biogenesis.","AT3G09690",null,121.82,-0.64855,0.19427,-3.3383,{"v":8.43E-4,"d":"8.43E-04"},3.5041E-3,"alpha/beta-Hydrolases superfamily protein."]
[{"$nulls":9},"AT5G06110","ATGLSA2",201.53,0.50432,0.15581,3.2367,1.2093E-3,0.0055,"DnaJ and myb-like DNA-binding domain-containing protein.","AT4G38150",null,87.636,0.8779,0.22561,3.8913,{"v":9.97e-05,"d":"9.97E-05"},{"v":0.00044,"d":"4.40E-04"},"Pentatricopeptide repeat (PPR) superfamily protein.","AT2G39490",null,6.1463,-6.2321,1.42,-4.3889,{"v":1.14e-05,"d":"1.14E-05"},{"v":4.86e-05,"d":"4.86E-05"},"F-box family protein.","AT1G13820",null,367.12,-0.40326,0.12085,-3.337,{"v":0.000847,"d":"8.47E-04"},0.0035185,"alpha/beta-Hydrolases superfamily protein."]
[{"$nulls":9},"AT1G35910","TPPD",20.886,1.5983,0.49429,3.2335,0.0012229,5.5531E-3,"full_name=trehalose-6-phosphate phosphatase D. Haloacid dehalogenase-like hydrolase (HAD) superfamily protein.","AT3G59970","MTHFR1",156.91,-0.79074,0.20333,-3.889,{"v":1.01E-4,"d":"1.01E-04"},{"v":0.000443,"d":"4.43E-04"},"full_name=methylenetetrahydrofolate reductase 1. methylenetetrahydrofolate reductase 1. methylenetetrahydrofolate reductase MTHFR1 mRNA, complete","AT4G13950","RALFL31",25.08,-2.2738,0.51848,-4.3854,{"v":1.16e-05,"d":"1.16E-05"},{"v":4.93e-05,"d":"4.93E-05"},"full_name=ralf-like 31. ralf-like 31. Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.","AT4G38270","GAUT3",269.38,-0.45306,0.13584,-3.3353,{"v":8.52E-4,"d":"8.52E-04"},0.0035338,"full_name=galacturonosyltransferase 3. galacturonosyltransferase 3. Encodes a protein with putative galacturonosyltransferase activity."]
[{"$nulls":9},"AT2G06990","HEN2",266.8,0.48661,0.15075,3.2279,1.2469E-3,0.0056542,"full_name=hua enhancer 2. RNA helicase, ATP-dependent, SK12/DOB1 protein. encodes a putative DExH-box RNA helicase that acts redundantly with HEN1, HUA1, and HUA2 in the specification of floral organ identity in the third whorl.","AT1G32320","MKK10",12.191,2.4472,0.63035,3.8823,{"v":1.03E-4,"d":"1.03E-04"},{"v":4.55E-4,"d":"4.55E-04"},"full_name=MAP kinase kinase 10. MAP kinase kinase 10. member of MAP Kinase Kinase","AT4G18620","PYL13",172.43,-0.84174,0.19208,-4.3821,{"v":1.18e-05,"d":"1.18E-05"},{"v":4.99E-5,"d":"4.99E-05"},"full_name=PYR1-like 13. PYR1-like 13. Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.","AT5G35160","TMN11",468.3,0.36095,0.10838,3.3304,{"v":0.000867,"d":"8.67E-04"},0.0035923,"Endomembrane protein 70 protein family."]
[{"$nulls":9},"AT1G26810","GALT1",51.054,-0.93971,0.29149,-3.2238,1.2649E-3,0.0057282,"full_name=galactosyltransferase1. galactosyltransferase1. Encodes a protein with &#946;1,3-galactosyltransferase activity involved in the biosynthesis of the Lewis a epitope of certain glycoproteins.","AT3G14920",null,317.01,0.6609,0.17043,3.8778,{"v":1.05E-4,"d":"1.05E-04"},{"v":0.000463,"d":"4.63E-04"},"Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein.","AT5G19120",null,18.148,-2.518,0.57496,-4.3795,{"v":1.19E-5,"d":"1.19E-05"},{"v":5.05e-05,"d":"5.05E-05"},"Eukaryotic aspartyl protease family protein.","AT3G27850","RPL12-C",331.41,0.43971,0.13209,3.3287,{"v":0.000872,"d":"8.72E-04"},0.003609,"full_name=ribosomal protein L12-C. ribosomal protein L12-C. 50S ribosomal protein L12-C"]
[{"$nulls":9},"AT2G05812",null,46.35,0.99868,0.31006,3.221,1.2775E-3,0.0057771,"Natural antisense transcript overlaps with AT2G05810. Potential natural antisense gene, locus overlaps with AT2G05810 Natural antisense transcript overlaps with AT2G05810","AT1G47128","RD21A",1436.3,-0.70506,0.18198,-3.8743,{"v":1.07E-4,"d":"1.07E-04"},{"v":0.000469,"d":"4.69E-04"},"full_name=responsive to dehydration 21A. Granulin repeat cysteine protease family protein. cysteine proteinase precursor-like protein/ dehydration stress-responsive gene (RD21). Has been shown to have peptide ligase activity and protease activity in vitro. RD21 is involved in immunity to the necrotrophic fungal pathogen Botrytis cinerea.","AT5G52510","SCL8",259.6,-0.74766,0.17092,-4.3742,{"v":1.22E-5,"d":"1.22E-05"},{"v":5.16e-05,"d":"5.16E-05"},"full_name=SCARECROW-like 8. SCARECROW-like 8.","AT4G14910","HISN5B",150,-0.65772,0.19777,-3.3256,{"v":0.000882,"d":"8.82E-04"},0.0036439,"full_name=HISTIDINE BIOSYNTHESIS 5B. HISTIDINE BIOSYNTHESIS 5B. Encodes a protein that is predicted to act as a imidazoleglycerol-phosphate dehydratase involved in histidine biosynthesis"]
[{"$nulls":9},"AT2G33800","EMB3113",84.449,-0.74203,0.2306,-3.2178,0.0012918,0.0058293,"full_name=EMBRYO DEFECTIVE 3113. Ribosomal protein S5 family protein.","AT1G65410","ABCI13",210.82,0.71725,0.18534,3.8699,{"v":0.000109,"d":"1.09E-04"},{"v":0.000476,"d":"4.76E-04"},"full_name=ATP-binding cassette I13. non-intrinsic ABC protein 11. Encodes a member of NAP subfamily of transporters. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.","AT4G33670",null,638.09,0.5609,0.12833,4.3709,{"v":1.24E-5,"d":"1.24E-05"},{"v":5.23e-05,"d":"5.23E-05"},"NAD(P)-linked oxidoreductase superfamily protein. Encodes a L-galactose dehydrogenase, involved in ascorbate biosynthesis","AT1G20620","CAT3",25615,-0.18191,0.054808,-3.3191,{"v":0.000903,"d":"9.03E-04"},0.0037228,"full_name=catalase 3. catalase 3. Catalase, catalyzes the breakdown of hydrogen peroxide (H2O2) into water and oxygen."]
[{"$nulls":9},"AT1G80120",null,110.32,0.6666,0.20741,3.2139,0.0013095,0.0059033,"LURP-one-like protein (DUF567).","AT1G35180",null,27.639,-1.6104,0.41625,-3.8687,{"v":0.000109,"d":"1.09E-04"},{"v":0.000478,"d":"4.78E-04"},"TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein.","AT3G11050","FER2",12725,-0.29172,0.066818,-4.3658,{"v":1.27E-5,"d":"1.27E-05"},{"v":5.35e-05,"d":"5.35E-05"},"full_name=ferritin 2. ferritin 2.","AT1G53885",null,3.7124,5.1736,1.5588,3.3188,{"v":0.000904,"d":"9.04E-04"},0.003723,"linoleate 9S-lipoxygenase-4 protein, putative (DUF581)."]
[{"$nulls":9},"AT1G06290","ACX3",339.74,0.43631,0.13585,3.2118,0.0013191,0.0059391,"full_name=acyl-CoA oxidase 3. acyl-CoA oxidase 3. Encodes an acyl-CoA oxidase with specificity for medium chain fatty acids.","AT2G24790","COL3",36.339,-1.4459,0.37407,-3.8654,{"v":1.11E-4,"d":"1.11E-04"},{"v":4.84E-4,"d":"4.84E-04"},"full_name=CONSTANS-like 3. CONSTANS-like 3. Positive regulator of photomorphogenesis that acts downstream of COP1 but can promote lateral root development independently of COP1 and also function as a daylength-sensitive regulator of shoot branching.","AT5G33280","CLCG",60.53,1.2571,0.2883,4.3605,{"v":1.3e-05,"d":"1.30E-05"},{"v":5.48e-05,"d":"5.48E-05"},"Voltage-gated chloride channel family protein.","AT2G34690","ACD11",264.93,0.46335,0.13984,3.3133,{"v":0.000922,"d":"9.22E-04"},0.0037915,"full_name=ACCELERATED CELL DEATH 11. Glycolipid transfer protein (GLTP) family protein. Gene product transports the glycolipid precursor sphingosine between membranes in vitro. Mutant constitutively expresses defense-related genes that accompany the hypersensitive response normally triggered by avirulent pathogens."]
[{"$nulls":9},"AT3G24150","KIX8",153.33,0.56878,0.17715,3.2107,0.001324,0.0059518,"hypothetical protein.","AT2G03280","RRT3",137.3,0.7442,0.19273,3.8613,{"v":1.13E-4,"d":"1.13E-04"},{"v":0.000492,"d":"4.92E-04"},"O-fucosyltransferase family protein.","AT5G22320",null,241.1,0.63345,0.14534,4.3584,{"v":1.31E-5,"d":"1.31E-05"},{"v":5.52E-5,"d":"5.52E-05"},"Leucine-rich repeat (LRR) family protein.","AT2G34040",null,794.9,-0.29806,0.089987,-3.3122,{"v":0.000926,"d":"9.26E-04"},0.0038017,"Apoptosis inhibitory protein 5 (API5)."]
[{"$nulls":9},"AT4G24990","ATGP4",435.84,0.39884,0.12434,3.2077,1.338E-3,0.0060068,"Ubiquitin family protein. geranylgeranylated protein ATGP4","AT1G20200","EMB2719",570.98,0.49267,0.12773,3.8573,{"v":1.15E-4,"d":"1.15E-04"},{"v":0.000499,"d":"4.99E-04"},"full_name=EMBRYO DEFECTIVE 2719. PAM domain (PCI/PINT associated module) protein.","AT3G12203","scpl17",75.497,-4.6196,1.0618,-4.3508,{"v":1.36E-5,"d":"1.36E-05"},{"v":5.71e-05,"d":"5.71E-05"},"full_name=serine carboxypeptidase-like 17. serine carboxypeptidase-like 17.","AT4G37540","LBD39",3.9662,5.2933,1.5996,3.3091,{"v":0.000936,"d":"9.36E-04"},3.8376E-3,"full_name=LOB domain-containing protein 39. LOB domain-containing protein 39."]
[{"$nulls":9},"AT1G02990",null,265.09,0.49255,0.15387,3.2011,0.0013688,6.1373E-3,"hypothetical protein.","AT3G50380",null,465.19,0.53612,0.13916,3.8526,{"v":1.17E-4,"d":"1.17E-04"},{"v":0.000508,"d":"5.08E-04"},"vacuolar protein sorting-associated protein, putative (DUF1162).","AT1G04850",null,539.85,0.57065,0.13123,4.3485,{"v":1.37e-05,"d":"1.37E-05"},{"v":5.76e-05,"d":"5.76E-05"},"ubiquitin-associated (UBA)/TS-N domain-containing protein.","AT3G22890","APS1",1785.4,-0.24788,0.074964,-3.3066,{"v":0.000944,"d":"9.44E-04"},0.0038673,"full_name=ATP sulfurylase 1. ATP sulfurylase 1. encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis. It may also participate in selenium metabolism."]
[{"$nulls":9},"AT1G55740","SIP1",199.43,0.50015,0.15631,3.1996,0.001376,0.0061662,"full_name=seed imbibition 1. seed imbibition 1.","AT3G61590","HWS",63.171,-1.0179,0.26425,-3.8519,{"v":1.17E-4,"d":"1.17E-04"},{"v":0.000509,"d":"5.09E-04"},"full_name=HAWAIIAN SKIRT. Galactose oxidase/kelch repeat superfamily protein.","AT3G45040","DOK1",243.37,-0.63364,0.14576,-4.347,{"v":1.38E-5,"d":"1.38E-05"},{"v":5.8E-5,"d":"5.80E-05"},"phosphatidate cytidylyltransferase family protein. Encodes a putative dolichol kinase.","AT2G18900",null,585.35,0.32505,0.09832,3.3061,{"v":0.000946,"d":"9.46E-04"},3.8731E-3,"Transducin/WD40 repeat-like superfamily protein."]
[{"$nulls":9},"AT3G51510",null,733.7,0.37302,0.11662,3.1987,1.3805E-3,0.0061787,"transmembrane protein.","AT2G44210",null,35.072,-1.4267,0.37054,-3.8503,{"v":1.18E-4,"d":"1.18E-04"},{"v":0.000512,"d":"5.12E-04"},"carboxyl-terminal peptidase (DUF239).","AT2G27050","EIL1",462.84,-0.48533,0.11176,-4.3425,{"v":1.41e-05,"d":"1.41E-05"},{"v":5.91E-5,"d":"5.91E-05"},"full_name=ETHYLENE-INSENSITIVE3-like 1. ETHYLENE-INSENSITIVE3-like 1. ethylene-insensitive3-like1 (EIL1)","AT4G25720","QC",146.91,-0.69969,0.21183,-3.303,{"v":0.000956,"d":"9.56E-04"},0.00391,"full_name=glutaminyl cyclase. glutaminyl cyclase. This locus encodes a protein with similarity to gamma-glutamylcyclotransferase that may be involved in catalyzing the formation of pyroglutate residue on proteins that have been post-translationally processed to reveal a glutamine at their N-terminus. Enzymatic assays to test the function of this protein were performed using a truncated form of the protein lacking a signal peptide that is most similar to the AT4G25720.1 protein model."]
[{"$nulls":9},"AT3G61440","CYSC1",512.41,-0.39287,0.12304,-3.1932,0.0014072,0.0062898,"full_name=cysteine synthase C1. cysteine synthase C1. Encodes a cysteine synthase isomer CysC1. The isomer is however less effective in cysteine biosynthesis. It is involved in beta-cyanoalanine biosynthesis, an intermediate of cyanide detoxification pathway.","AT1G71480",null,72.574,-1.0679,0.27758,-3.8471,{"v":1.2E-4,"d":"1.20E-04"},{"v":0.000518,"d":"5.18E-04"},"Nuclear transport factor 2 (NTF2) family protein.","AT1G05340","ATHCYSTM1",1119.4,-0.39322,0.090601,-4.3402,{"v":1.42E-5,"d":"1.42E-05"},{"v":5.96e-05,"d":"5.96E-05"},"cysteine-rich TM module stress tolerance protein.","AT5G46040",null,20.389,1.808,0.54776,3.3007,{"v":0.000964,"d":"9.64E-04"},0.0039379,"Major facilitator superfamily protein."]
[{"$nulls":9},"AT5G66040","STR16",654.33,-0.35514,0.11147,-3.1859,1.4432E-3,6.4411E-3,"full_name=sulfurtransferase protein 16. sulfurtransferase protein 16. Encodes a protein with thiosulfate sulfurtransferase/rhodanese activity in vitro, however, it is likely to use a substrate other than thiosulfate or 3-mercaptopyruvate in vivo.","AT5G41960",null,348.64,0.5404,0.14059,3.8438,{"v":1.21E-4,"d":"1.21E-04"},{"v":0.000524,"d":"5.24E-04"},"zinc finger matrin-type protein.","AT1G67440","emb1688",211.78,0.68647,0.15842,4.3331,{"v":1.47E-5,"d":"1.47E-05"},{"v":6.15e-05,"d":"6.15E-05"},"full_name=embryo defective 1688. Minichromosome maintenance (MCM2/3/5) family protein.","AT2G07040","PRK2A",23.107,-2.3853,0.72343,-3.2972,{"v":0.000976,"d":"9.76E-04"},0.0039806,"Leucine-rich repeat protein kinase family protein. Pollen receptor kinase. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth."]
[{"$nulls":9},"AT3G53920","SIGC",60.802,-0.86122,0.27076,-3.1808,1.4689E-3,0.0065474,"full_name=RNApolymerase sigma-subunit C. RNApolymerase sigma-subunit C. Encodes a sigma-like transcription factor, Sigma 3 (SIG3 or SIGC). As a subunit of chloroplast RNA polymerase, SIG3 confers the ability to recognize promoter sequences on the core enzyme. SIG3 transcribes specifically the psbN gene in plastids.","AT3G60970","ABCC15",28.368,-1.9879,0.51754,-3.8411,{"v":0.000123,"d":"1.23E-04"},{"v":0.000529,"d":"5.29E-04"},"full_name=ATP-binding cassette C15. multidrug resistance-associated protein 15. member of MRP subfamily","AT1G03140","PRP18A",416.27,0.52135,0.12043,4.3291,{"v":1.5E-5,"d":"1.50E-05"},{"v":6.25e-05,"d":"6.25E-05"},"splicing factor Prp18 family protein.","AT4G39220","ATRER1A",229.46,0.48544,0.14732,3.2951,{"v":0.000984,"d":"9.84E-04"},0.0040062,"Rer1 family protein. Key player of retrieval of ER membrane proteins"]
[{"$nulls":9},"AT3G17780",null,54.152,-0.91408,0.28762,-3.1781,1.4823E-3,0.0065988,"B-cell receptor-associated-like protein.","AT5G18580","FASS",200.95,-0.64825,0.16901,-3.8356,{"v":1.25E-4,"d":"1.25E-04"},{"v":0.000541,"d":"5.41E-04"},"full_name=FASS 1. tonneau 2 (TON2). fass mutants have aberrant cell shapes due to defects in arrangement of cortical microtubules. Encodes a protein highly conserved in higher plants and similar in its C-terminal part to B' regulatory subunits of type 2A protein phosphatases. Interacts with an Arabidopsis type A subunit of PP2A in the yeast two-hybrid system.","AT5G04710","DAP2",151.28,0.77932,0.18016,4.3257,{"v":1.52E-5,"d":"1.52E-05"},{"v":6.34e-05,"d":"6.34E-05"},"Zn-dependent exopeptidases superfamily protein.","AT1G66590","COX19-1",104.24,-0.70498,0.21413,-3.2923,{"v":0.000994,"d":"9.94E-04"},0.0040404,"full_name=cytochrome c oxidase 19-1. cytochrome c oxidase 19-1."]
[{"$nulls":9},"AT4G01330",null,324.88,-0.45854,0.14444,-3.1747,1.4999E-3,0.0066669,"Protein kinase superfamily protein.","AT1G21780",null,380.55,0.5663,0.14771,3.834,{"v":1.26E-4,"d":"1.26E-04"},{"v":0.000543,"d":"5.43E-04"},"BTB/POZ domain-containing protein. BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B.","AT2G32220",null,175.3,-0.87403,0.20228,-4.3208,{"v":1.55e-05,"d":"1.55E-05"},{"v":6.48e-05,"d":"6.48E-05"},"Ribosomal L27e protein family.","AT4G17730","SYP23",948.63,0.32493,0.098732,3.2911,{"v":0.000998,"d":"9.98E-04"},0.0040522,"full_name=syntaxin of plants 23. syntaxin of plants 23. member of SYP2 Gene Family"]
[{"$nulls":9},"AT1G66840","PMI2",56.609,-0.89665,0.28274,-3.1713,0.0015174,0.0067325,"full_name=plastid movement impaired 2. PLASTID MOVEMENT IMPAIRED protein (DUF827). Encodes a coiled-coil protein WEB2 (weak chloroplast movement under blue light 2, also named PMI2/plastid movement impaired 2). Involved in chloroplast avoidance movement under intermediate and high light intensities. WEB2, together with another coiled-coil protein WEB1 (AT2G26570), maintains the chloroplast photorelocation movement velocity.","AT4G33090","APM1",915.86,-0.42359,0.11056,-3.8314,{"v":1.27E-4,"d":"1.27E-04"},{"v":0.000548,"d":"5.48E-04"},"full_name=aminopeptidase M1. aminopeptidase M1. encodes an aminopeptidase, a ortholog of mouse microsomal AP (EC 3.4.11.2).","AT3G20620",null,135.57,-0.78573,0.182,-4.3171,{"v":1.58e-05,"d":"1.58E-05"},{"v":6.57e-05,"d":"6.57E-05"},"F-box family protein-like protein.","AT4G22670","HIP1",1468.3,-0.25672,0.078088,-3.2876,0.0010104,4.0948E-3,"full_name=HSP70-interacting protein 1. HSP70-interacting protein 1. Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones."]
[{"$nulls":9},"AT3G46640","PCL1",247.09,-0.46019,0.14531,-3.1669,0.0015408,0.0068295,"full_name=PHYTOCLOCK 1. Homeodomain-like superfamily protein. Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter.","AT2G21150","XCT",205.97,0.60002,0.15667,3.8297,{"v":0.000128,"d":"1.28E-04"},{"v":0.000551,"d":"5.51E-04"},"full_name=XAP5 CIRCADIAN TIMEKEEPER. XAP5 family protein. XAP5 family protein involved in light regulation of the circadian clock and photomorphogenesis. Nuclear localized.","AT3G54380","SAC3C",186.23,0.72035,0.16691,4.3157,{"v":1.59E-5,"d":"1.59E-05"},{"v":6.61e-05,"d":"6.61E-05"},"full_name=yeast Sac3 homolog C. SAC3/GANP/Nin1/mts3/eIF-3 p25 family.","AT3G22500","ATECP31",35289,-0.15341,0.046672,-3.2869,0.0010131,0.0041015,"full_name=LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP31. Seed maturation protein. late embryogenesis abundant (LEA) protein"]
[{"$nulls":9},"AT1G68410",null,125.41,0.62889,0.19881,3.1633,0.0015602,0.0069047,"Protein phosphatase 2C family protein.","AT5G37020","ARF8",266.55,-0.56418,0.14739,-3.8277,{"v":0.000129,"d":"1.29E-04"},{"v":0.000555,"d":"5.55E-04"},"full_name=auxin response factor 8. auxin response factor 8. Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF6 to control stamen elongation and flower maturation. Expression of ARF8 is controlled by miR167.","AT3G03870",null,114.21,0.84161,0.1952,4.3116,{"v":1.62e-05,"d":"1.62E-05"},{"v":6.72e-05,"d":"6.72E-05"},"transmembrane protein.","AT3G16500","PAP1",54.941,0.98011,0.29853,3.2832,0.0010265,0.0041493,"full_name=phytochrome-associated protein 1. phytochrome-associated protein 1. phytochrome-associated protein 1 (PAP1)"]
[{"$nulls":9},"AT4G03390","SRF3",567.27,0.3501,0.11081,3.1594,0.0015809,0.0069874,"full_name=STRUBBELIG-receptor family 3. STRUBBELIG-receptor family 3.","AT4G27270",null,4.6593,-5.4953,1.4361,-3.8265,{"v":0.00013,"d":"1.30E-04"},{"v":0.000557,"d":"5.57E-04"},"Quinone reductase family protein.","AT5G47820","FRA1",247.2,-0.66675,0.15469,-4.3102,{"v":1.63E-5,"d":"1.63E-05"},{"v":6.75e-05,"d":"6.75E-05"},"full_name=FRAGILE FIBER 1. P-loop containing nucleoside triphosphate hydrolases superfamily protein. encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers.","AT4G05150",null,102.11,0.70641,0.21535,3.2802,0.0010372,0.0041858,"Octicosapeptide/Phox/Bem1p family protein."]
[{"$nulls":9},"AT1G16860","SHOU4L",387.66,-0.40011,0.12679,-3.1556,1.6018E-3,7.0691E-3,"Ubiquitin-specific protease family C19-related protein.","AT1G31480","SGR2",669.56,0.51702,0.1352,3.824,{"v":0.000131,"d":"1.31E-04"},{"v":5.62E-4,"d":"5.62E-04"},"full_name=SHOOT GRAVITROPISM 2. shoot gravitropism 2 (SGR2). encodes a novel protein that may be part of a gene family represented by bovine phosphatidic acid-preferring phospholipase A1 (PA-PLA1)containing a putative transmembrane domain. SGR2 is involved in the formation and function of the vacuole.","AT5G54650","Fh5",82.832,-1.0348,0.24025,-4.3074,{"v":1.65e-05,"d":"1.65E-05"},{"v":6.83e-05,"d":"6.83E-05"},"full_name=formin homology5. formin homology5. Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. FH5 was shown to be a maternally expressed imprinted gene.","AT3G20910","NF-YA9",664.45,0.30524,0.093117,3.2781,1.0452E-3,0.0042135,"full_name=nuclear factor Y, subunit A9. nuclear factor Y, subunit A9."]
[{"$nulls":9},"AT5G63760","ARI15",304.83,-0.42378,0.1344,-3.153,1.6159E-3,0.0071224,"full_name=ARIADNE 15. RING/U-box superfamily protein.","AT3G54810","BME3",89.942,-1.2682,0.33179,-3.8222,{"v":0.000132,"d":"1.32E-04"},{"v":0.000565,"d":"5.65E-04"},"full_name=BLUE MICROPYLAR END 3. Plant-specific GATA-type zinc finger transcription factor family protein. Encodes a protein containing a GATA type zinc finger domain that is expressed in the embryo axis and involved in germination. Mutants have a reduced rate of germination even when stratified.","AT3G48750","CDC2",118.2,0.90767,0.21102,4.3014,{"v":1.7E-5,"d":"1.70E-05"},{"v":7.01e-05,"d":"7.01E-05"},"full_name=cell division control 2. cell division control 2. A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase.","AT1G02310","MAN1",134.2,-0.75338,0.23001,-3.2755,1.0549000000000001E-3,0.0042471,"full_name=endo-beta-mannanase 1. Glycosyl hydrolase superfamily protein."]
[{"$nulls":9},"AT1G69760",null,55.79,0.97695,0.30998,3.1516,1.6236E-3,0.0071545,"suppressor SRP40-like protein.","AT3G50050",null,59.238,1.1251,0.29441,3.8217,{"v":0.000133,"d":"1.33E-04"},{"v":0.000566,"d":"5.66E-04"},"Eukaryotic aspartyl protease family protein.","AT3G61310","AHL11",11.116,-5.2097,1.2115,-4.3001,{"v":1.71e-05,"d":"1.71E-05"},{"v":7.05e-05,"d":"7.05E-05"},"AT hook motif DNA-binding family protein.","AT4G37320","CYP81D5",219.79,-0.51655,0.15771,-3.2753,0.0010556,0.004249,"full_name=cytochrome P450, family 81, subfamily D, polypeptide 5. cytochrome P450, family 81, subfamily D, polypeptide 5. member of CYP81D"]
[{"$nulls":9},"AT5G64510","TIN1",70.62,0.78578,0.24949,3.1496,0.0016352,0.0071946,"full_name=tunicamycin induced 1. tunicamycin induced protein. Encodes Tunicamycin Induced 1(TIN1), a plant-speci%1Ec ER stress-inducible protein. TIN1 mutation affects pollen surface morphology. Transcriptionally induced by treatment with the N-linked glyclsylation inhibitor tunicamycin.","AT1G05710",null,103.19,0.80452,0.21071,3.8182,{"v":1.34E-4,"d":"1.34E-04"},{"v":0.000574,"d":"5.74E-04"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT3G44290","NAC060",463.35,0.49236,0.11458,4.2969,{"v":1.73E-5,"d":"1.73E-05"},{"v":7.14e-05,"d":"7.14E-05"},"full_name=NAC domain containing protein 60. NAC domain containing protein 60.","AT5G38850",null,88.882,0.78903,0.24117,3.2717,1.0692E-3,0.0042959,"Disease resistance protein (TIR-NBS-LRR class)."]
[{"$nulls":9},"AT3G11945","HST",86.48,-0.71222,0.22631,-3.1471,1.6492E-3,0.0072471,"full_name=homogentisate prenyltransferase. homogentisate prenyltransferase. Encodes a protein involved in plastoquinone-9 biosynthesis. The enzyme possesses homogentisate prenyltransferase activity and was shown to use solanesyl diphosphate, farnesyl diphosphate and geranylgeranyldiphosphate as prenyl donors, but not phytyldiphosphate. This gene At3g11945 derives from a split of At3g11950, publications Tian et al (2007) and Sadre et al (2006) refer to this gene as At3g11950.","AT3G63090",null,73.879,0.98541,0.25842,3.8133,{"v":1.37E-4,"d":"1.37E-04"},{"v":0.000584,"d":"5.84E-04"},"Ubiquitin carboxyl-terminal hydrolase family protein.","AT5G03240","UBQ3",2443.8,0.44023,0.10255,4.2927,{"v":1.77E-5,"d":"1.77E-05"},{"v":7.27e-05,"d":"7.27E-05"},"full_name=polyubiquitin 3. polyubiquitin 3. encodes ubiquitin that is attached to proteins destined for degradation. UBQ3 is most homologous with UBQ4, and is expressed in higher levels in vegetative tissue but lower levels in flowers than UBQ4. UBQ3 encodes different number of ubiquitins in different ecotypes. UBQ3 transcript level is modulated by UV-B and light/dark treatments.","AT3G23620","ARPF2",399.65,0.38431,0.11757,3.2689,0.0010797,4.3336E-3,"Ribosomal RNA processing Brix domain protein."]
[{"$nulls":9},"AT4G39260","CCR1",621,0.56096,0.17842,3.144,0.0016663,7.3114E-3,"full_name=cold, circadian rhythm, and RNA binding 1. cold, circadian rhythm, and RNA binding 1. Encodes a glycine-rich protein with RNA binding domain at the N-terminus. Protein is structurally similar to proteins induced by stress in other plants. Gene expression is induced by cold. Transcript undergoes circadian oscillations that is depressed by overexpression of AtGRP7. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).","AT4G29700",null,18.933,-1.9597,0.51418,-3.8112,{"v":0.000138,"d":"1.38E-04"},{"v":0.000588,"d":"5.88E-04"},"Alkaline-phosphatase-like family protein.","AT1G65880","BZO1",11.984,-4.652,1.0847,-4.2889,{"v":1.8E-5,"d":"1.80E-05"},{"v":7.38e-05,"d":"7.38E-05"},"full_name=benzoyloxyglucosinolate 1. benzoyloxyglucosinolate 1. Encodes a benzoate-CoA ligase. Involved in the biosynthesis of benzoyloxyglucosinolate in Arabidopsis seeds.","AT1G10430","PP2A-2",134.95,0.63037,0.19301,3.2659,1.091E-3,0.0043721,"full_name=protein phosphatase 2A-2. protein phosphatase 2A-2. Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4]. It regulates the activation of ADF/cofilin, which, in turn, regulates actin cytoskeleton remodeling and is involved in phot2-mediated chloroplast avoidance movements."]
[{"$nulls":9},"AT5G47840","AMK2",226.08,-0.48036,0.15287,-3.1423,0.0016762,0.0073456,"full_name=adenosine monophosphate kinase. adenosine monophosphate kinase.","AT5G24690",null,449.97,0.5005,0.13137,3.81,{"v":0.000139,"d":"1.39E-04"},{"v":0.00059,"d":"5.90E-04"},"plant/protein, putative (DUF3411).","AT3G06370","NHX4",14.193,-3.8741,0.90389,-4.286,{"v":1.82e-05,"d":"1.82E-05"},{"v":7.47E-5,"d":"7.47E-05"},"full_name=sodium hydrogen exchanger 4. sodium hydrogen exchanger 4. member of Sodium proton exchanger family","AT4G01670",null,22.612,1.6195,0.49622,3.2637,1.0998E-3,0.004402,"hypothetical protein."]
[{"$nulls":9},"AT3G18080","BGLU44",200.69,-0.50689,0.16156,-3.1376,1.7036E-3,0.0074563,"full_name=B-S glucosidase 44. B-S glucosidase 44.","AT5G58920",null,173.17,0.71585,0.18792,3.8093,{"v":0.000139,"d":"1.39E-04"},{"v":0.000591,"d":"5.91E-04"},"homeobox prospero protein.","AT4G13530",null,901.91,0.43989,0.10268,4.2839,{"v":1.84E-5,"d":"1.84E-05"},{"v":7.53e-05,"d":"7.53E-05"},"transmembrane protein.","AT5G52190",null,201.54,-0.53739,0.16475,-3.2618,1.1071E-3,4.4259E-3,"Sugar isomerase (SIS) family protein."]
[{"$nulls":9},"AT3G57450",null,172.66,-0.59849,0.19105,-3.1326,0.0017329,0.0075768,"hypothetical protein.","AT1G28410",null,34.811,-1.353,0.35528,-3.8083,{"v":0.00014,"d":"1.40E-04"},{"v":0.000593,"d":"5.93E-04"},"myosin heavy chain-like protein.","AT2G47190","MYB2",5.7515,-6.1295,1.4315,-4.282,{"v":1.85e-05,"d":"1.85E-05"},{"v":7.59e-05,"d":"7.59E-05"},"full_name=myb domain protein 2. myb domain protein 2. Encodes a MYB transcription factor that possesses an R2R3 MYB DNA binding domain and is known to regulate the expression of salt- and dehydration-responsive genes. Has been shown to bind calmodulin.","AT2G05180","CYP705A6",7.7192,3.6201,1.1103,3.2605,1.1122E-3,0.0044417,"full_name=cytochrome P450, family 705, subfamily A, polypeptide 6. cytochrome P450, family 705, subfamily A, polypeptide 6. member of CYP705A"]
[{"$nulls":9},"AT1G53320","TLP7",399.6,0.38989,0.1246,3.1291,0.0017536,0.0076521,"full_name=tubby like protein 7. tubby like protein 7. Member of TLP family","AT1G52380",null,334.71,0.51018,0.13416,3.8027,{"v":0.000143,"d":"1.43E-04"},{"v":0.000605,"d":"6.05E-04"},"NUP50 (Nucleoporin 50 kDa) protein.","AT2G24550",null,13.666,-3.034,0.70943,-4.2767,{"v":1.9e-05,"d":"1.90E-05"},{"v":7.76e-05,"d":"7.76E-05"},"major centromere autoantigen B-like protein.","AT5G58790",null,67.532,-0.84988,0.2612,-3.2538,0.0011388,0.0045389,"hypothetical protein."]
[{"$nulls":9},"AT3G62870",null,2003.4,-0.3393,0.10874,-3.1203,1.8066E-3,0.0078735,"Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein.","AT1G70210","CYCD1;1",25.168,-1.8283,0.48104,-3.8007,{"v":1.44E-4,"d":"1.44E-04"},{"v":0.00061,"d":"6.10E-04"},"full_name=CYCLIN D1;1. CYCLIN D1;1. Encodes a D-type cyclin that physically interacts with CDC2A. Its expression is upregulated early during germination.","AT2G26300","GP ALPHA 1",185.07,0.91572,0.21429,4.2732,{"v":1.93e-05,"d":"1.93E-05"},{"v":7.87e-05,"d":"7.87E-05"},"full_name=G protein alpha subunit 1. G protein alpha subunit 1. Encodes an alpha subunit of a heterotrimeric GTP-binding protein. The active GTP-bound form of GPA1 binds to the GTG1 and GTG2 abscisic acid (ABA) receptors and appears to affect their GTPase and GTP-binding activity, and hence, ABA binding abilities. GPA1 is a positive regulator in ABA-mediated inhibition of stomatal opening. Plants with recessive mutant alleles have complex phenotypes including: reduced brassinolide response, reduced cell divisions, round leaves, short hypocotyls. It is likely to be involved in the signaling events that trigger unfolded protein response-associated cell death. GPA1 is also involved in sugar signaling.","AT1G70650",null,70.788,0.84788,0.26077,3.2514,0.0011483,0.0045711,"Ran BP2/NZF zinc finger-like superfamily protein."]
[{"$nulls":9},"AT5G13390","NEF1",814.33,0.32377,0.10393,3.1154,0.0018371,0.0079941,"full_name=NO EXINE FORMATION 1. no exine formation 1. Required for normal pollen development and lipid accumulation within the tapetum","AT5G22050",null,77.401,-0.93329,0.24583,-3.7964,{"v":1.47E-4,"d":"1.47E-04"},{"v":0.000619,"d":"6.19E-04"},"Protein kinase superfamily protein.","AT5G20840","SAC4",155.87,0.7408,0.17353,4.2691,{"v":1.96e-05,"d":"1.96E-05"},{"v":8e-05,"d":"8.00E-05"},"Phosphoinositide phosphatase family protein.","AT2G01090",null,63.873,-0.85959,0.26458,-3.2489,1.1585E-3,0.0046049,"Ubiquinol-cytochrome C reductase hinge protein."]
[{"$nulls":9},"AT5G01620","TBL35",50.026,-0.94955,0.30504,-3.1128,0.0018531,0.0080536,"full_name=TRICHOME BIREFRINGENCE-LIKE 35. TRICHOME BIREFRINGENCE-LIKE 35. Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT3G46220",null,390.33,-0.50484,0.13301,-3.7956,{"v":1.47E-4,"d":"1.47E-04"},{"v":0.000621,"d":"6.21E-04"},"E3 UFM1-protein ligase-like protein.","AT1G34000","OHP2",152.74,-0.89979,0.21091,-4.2663,{"v":1.99e-05,"d":"1.99E-05"},{"v":8.09e-05,"d":"8.09E-05"},"full_name=one-helix protein 2. one-helix protein 2. Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions.","AT1G04080","PRP39",1156.8,-0.28162,0.086728,-3.2472,1.1657E-3,0.0046274,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
[{"$nulls":9},"AT2G47000","ABCB4",20.072,1.5189,0.48875,3.1077,0.0018853,0.0081815,"full_name=ATP-binding cassette B4. ATP binding cassette subfamily B4. Encodes an auxin efflux transmembrane transporter that is a member of the multidrug resistance P-glycoprotein (MDR/PGP) subfamily of ABC transporters. Functions in the basipetal redirection of auxin from the root tip. Exhibits apolar plasma membrane localization in the root cap and polar localization in tissues above and is involved in root hair elongation.","AT5G03290","IDH-V",303.13,0.58963,0.15543,3.7935,{"v":0.000149,"d":"1.49E-04"},{"v":0.000625,"d":"6.25E-04"},"full_name=isocitrate dehydrogenase V. isocitrate dehydrogenase V. Encodes a catalytic subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase.","AT1G77450","NAC032",1383.6,-0.44955,0.10549,-4.2617,{"v":2.03e-05,"d":"2.03E-05"},{"v":8.25E-5,"d":"8.25E-05"},"full_name=NAC domain containing protein 32. NAC domain containing protein 32.","AT4G26610","D6PKL1",81.258,0.7649,0.23571,3.2451,1.1741E-3,0.004654,"full_name=D6 protein kinase like 1. D6 protein kinase like 1."]
[{"$nulls":9},"AT4G33905",null,43.871,1.033,0.3325,3.1069,1.8909E-3,0.0081998,"Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein.","AT1G12650",null,170.82,0.67585,0.17823,3.792,{"v":0.000149,"d":"1.49E-04"},{"v":0.000628,"d":"6.28E-04"},"rRNA biogenesis RRP36-like protein.","AT3G54220","SCR",124.42,-1.0851,0.25468,-4.2604,{"v":2.04e-05,"d":"2.04E-05"},{"v":8.29e-05,"d":"8.29E-05"},"full_name=SCARECROW. GRAS family transcription factor. Encodes a member of a novel family having similarity to DNA binding proteins containing basic-leucine zipper regions; scr is expressed in cortex/endodermal initial cells and in the endodermal cell lineage. Regulates the radial organization of the root. Is required cell-autonomously for distal specification of the quiescent center, which in turn regulates stem cell fate of immediately surrounding cells. SCR appears to be a direct target of SHR.","AT5G65910",null,382.18,0.37187,0.11466,3.2434,0.0011812,0.0046789,"BSD domain-containing protein."]
[{"$nulls":9},"AT4G22840","BASS6",59.756,0.83508,0.26915,3.1026,0.0019182,0.0082974,"Sodium Bile acid symporter family.","AT2G19920",null,7.9964,4.0955,1.0816,3.7864,{"v":0.000153,"d":"1.53E-04"},{"v":0.000641,"d":"6.41E-04"},"RNA-dependent RNA polymerase family protein.","AT3G26740","CCL",6.2616,-6.2474,1.4678,-4.2563,{"v":2.08e-05,"d":"2.08E-05"},{"v":8.43e-05,"d":"8.43E-05"},"full_name=CCR-like. CCR-like protein. transcripts are differentially regulated at the level of mRNA stability at different times of day controlled by the circadian clock. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant.","AT1G03760",null,688.56,0.30023,0.092731,3.2377,1.2051E-3,4.764E-3,"Prefoldin chaperone subunit family protein."]
[{"$nulls":9},"AT3G45900",null,179.64,0.5195,0.16744,3.1026,0.0019182,0.0082974,"Ribonuclease P protein subunit P38-like protein.","AT2G14740","VSR3",444.8,0.46528,0.12298,3.7835,{"v":1.55E-4,"d":"1.55E-04"},{"v":0.000649,"d":"6.49E-04"},"full_name=vaculolar sorting receptor 3. vaculolar sorting receptor 3. Encodes a vacuolar sorting receptor that participates in vacuolar sorting in vegetative tissues and in seeds.","AT1G15410",null,40.558,1.6931,0.39782,4.256,{"v":2.08e-05,"d":"2.08E-05"},{"v":8.44e-05,"d":"8.44E-05"},"aspartate-glutamate racemase family.","AT5G28680","ANX2",9.4923,-3.4032,1.0512,-3.2373,0.0012066,0.0047687,"full_name=ANXUR2. Malectin/receptor-like protein kinase family protein. Receptor-like kinase required for maintenance of pollen tube growth. Display polar localization at the plasma membrane of the pollen tube tip."]
[{"$nulls":9},"AT5G53560","CB5-E",757.26,-0.32172,0.10373,-3.1014,1.9261E-3,0.0083235,"full_name=cytochrome B5 isoform E. cytochrome B5 isoform E. Encodes a cytochrome b5 isoform that can be reduced by AtCBR, a cytochrome b5 reductase.","AT3G16190",null,1388.7,-0.43124,0.11408,-3.7801,{"v":0.000157,"d":"1.57E-04"},{"v":0.000657,"d":"6.57E-04"},"Isochorismatase family protein.","AT1G80770","PDE318",66.978,1.0899,0.25624,4.2532,{"v":2.11e-05,"d":"2.11E-05"},{"v":8.53E-5,"d":"8.53E-05"},"full_name=pigment defective 318. P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT5G64410","OPT4",50.373,1.0294,0.31816,3.2356,0.0012137,0.0047908,"full_name=oligopeptide transporter 4. oligopeptide transporter 4. oligopeptide transporter"]
[{"$nulls":9},"AT5G45310",null,549.04,0.57629,0.18591,3.0998,0.0019366,0.0083583,"coiled-coil protein.","AT5G13110","G6PD2",352.68,-0.58561,0.15506,-3.7767,{"v":0.000159,"d":"1.59E-04"},{"v":0.000665,"d":"6.65E-04"},"full_name=glucose-6-phosphate dehydrogenase 2. glucose-6-phosphate dehydrogenase 2. Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.","AT3G56480","SCAB3",8.8592,-5.7786,1.36,-4.249,{"v":2.15e-05,"d":"2.15E-05"},{"v":8.68e-05,"d":"8.68E-05"},"myosin heavy chain-like protein.","AT5G10920",null,132.74,0.60871,0.18821,3.2342,1.2197E-3,0.0048082,"L-Aspartase-like family protein."]
[{"$nulls":9},"AT5G59500",null,68.546,0.7838,0.25322,3.0953,0.001966,0.008472,"protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase.","AT1G44760",null,4.6029,-5.4807,1.452,-3.7745,{"v":0.00016,"d":"1.60E-04"},{"v":0.00067,"d":"6.70E-04"},"Adenine nucleotide alpha hydrolases-like superfamily protein.","AT4G22270","MRB1",23.493,-2.07,0.48765,-4.2449,{"v":2.19E-5,"d":"2.19E-05"},{"v":8.83e-05,"d":"8.83E-05"},"full_name=MEMBRANE RELATED BIGGER1. transmembrane protein, putative (DUF3537). Encodes a plasma membrane protein involved in the positive regulation of organ size development. Overexpression results in organ size enlargement.","AT1G51035",null,7.8514,-2.9741,0.92019,-3.232,0.0012291,0.0048374,"hypothetical protein."]
[{"$nulls":9},"AT4G02130","GATL6",33.789,-1.2127,0.39221,-3.0921,0.0019874,8.548E-3,"full_name=galacturonosyltransferase 6. galacturonosyltransferase 6. Encodes a protein with putative galacturonosyltransferase activity.","AT5G51130",null,112.2,0.76824,0.20376,3.7704,{"v":1.63E-4,"d":"1.63E-04"},{"v":0.000679,"d":"6.79E-04"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT5G11320","YUC4",12.72,-4.0559,0.95668,-4.2396,{"v":2.24e-05,"d":"2.24E-05"},{"v":9.03e-05,"d":"9.03E-05"},"full_name=YUCCA4. Flavin-binding monooxygenase family protein. Belongs to the YUC gene family. Encodes a predicted flavin monooxygenase YUC4 involved in auxin biosynthesis and plant development.","AT5G13030","SELO",1612.1,-0.24969,0.077325,-3.2291,1.242E-3,0.0048793,"selenoprotein O."]
[{"$nulls":9},"AT1G54030","MVP1",516.27,0.35297,0.1142,3.0907,1.9965E-3,0.0085786,"full_name=MODIFIED VACUOLE PHENOTYPE 1. GDSL-like Lipase/Acylhydrolase superfamily protein. Encodes a vacuolar protein. Mutation causes organizational defects in the endoplasmic reticulum and aberrant protein trafficking in the plant secretory pathway.","AT1G26620",null,58.021,-1.1656,0.30944,-3.7668,{"v":1.65E-4,"d":"1.65E-04"},{"v":0.000689,"d":"6.89E-04"},"T-box transcription factor, putative (DUF863).","AT4G27800","TAP38",303.48,0.59491,0.14041,4.2371,{"v":2.26E-5,"d":"2.26E-05"},{"v":9.12e-05,"d":"9.12E-05"},"full_name=thylakoid-associated phosphatase 38. thylakoid-associated phosphatase 38. Choroplast protein phosphatase TAP38/PPH1 is required for efficient dephosphorylation of the LHCII anthena and state transition from state 2 to state 1.","AT3G28830",null,27.407,-2.3014,0.71314,-3.2271,1.2504E-3,0.0049075,"mucin-like protein, putative (DUF1216)."]
[{"$nulls":9},"AT4G10020","HSD5",6510.7,0.25093,0.081282,3.0872,0.0020208,0.0086722,"full_name=hydroxysteroid dehydrogenase 5. hydroxysteroid dehydrogenase 5. Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.","AT5G17800","MYB56",13.366,-2.6769,0.71079,-3.7661,{"v":1.66E-4,"d":"1.66E-04"},{"v":0.00069,"d":"6.90E-04"},"full_name=myb domain protein 56. myb domain protein 56. Member of the R2R3 factor gene family that acts as a cell-specific repressor of quiescent center (QC) divisions in the primary root, acting through the BR signaling pathway. Works with BES1 to regulate QC division in the root.","AT3G46060","RABE1c",246.35,-0.60847,0.14379,-4.2316,{"v":2.32e-05,"d":"2.32E-05"},{"v":9.33e-05,"d":"9.33E-05"},"RAB GTPase homolog 8A. small GTP-binding protein (ara-3)","AT5G12440",null,76.262,-0.83972,0.26049,-3.2236,0.0012658,4.9616E-3,"CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein."]
[{"$nulls":9},"AT4G37530",null,198.97,0.54828,0.17801,3.0801,0.0020694,0.0088701,"Peroxidase superfamily protein.","AT1G17430",null,2347.8,-0.40132,0.10664,-3.7632,{"v":0.000168,"d":"1.68E-04"},{"v":0.000697,"d":"6.97E-04"},"alpha/beta-Hydrolases superfamily protein.","AT4G36800","RCE1",568.33,-0.45436,0.10746,-4.2284,{"v":2.35e-05,"d":"2.35E-05"},{"v":9.46e-05,"d":"9.46E-05"},"full_name=RUB1 conjugating enzyme 1. RUB1 conjugating enzyme 1. RUB1 conjugating enzyme that conjugates CUL1 and is involved in auxin response and embryogenesis. RCE1 protein physically interacts with RBX1, which may be the E3 for CUL1.","AT5G54095",null,30.346,-2.2274,0.69137,-3.2218,1.274E-3,0.0049878,"proteoglycan-like protein."]
[{"$nulls":9},"AT2G47790","GTS1",180.32,0.51939,0.16886,3.0759,0.0020987,0.0089823,"Transducin/WD40 repeat-like superfamily protein.","AT4G10330",null,178.92,0.62814,0.16704,3.7603,{"v":0.00017,"d":"1.70E-04"},{"v":0.000704,"d":"7.04E-04"},"glycine-rich protein.","AT4G15415","ATB' GAMMA",147.81,-0.78049,0.18482,-4.223,{"v":2.41E-5,"d":"2.41E-05"},{"v":9.67e-05,"d":"9.67E-05"},"Protein phosphatase 2A regulatory B subunit family protein. B' regulatory subunit of PP2A (AtB'gamma)","AT1G13570",null,174.04,-0.52272,0.16249,-3.217,1.2955E-3,0.0050646,"F-box/RNI-like superfamily protein."]
[{"$nulls":9},"AT5G35570",null,120.57,0.59986,0.19524,3.0723,0.0021239,0.0090789,"O-fucosyltransferase family protein.","AT1G52510",null,553.5,-0.49454,0.13168,-3.7557,{"v":1.73E-4,"d":"1.73E-04"},{"v":0.000716,"d":"7.16E-04"},"alpha/beta-Hydrolases superfamily protein.","AT1G02990",null,260.22,-0.64166,0.15203,-4.2207,{"v":2.44E-5,"d":"2.44E-05"},{"v":9.76e-05,"d":"9.76E-05"},"hypothetical protein.","AT3G57157","SORF5",11.963,2.2539,0.70093,3.2157,0.0013015,0.0050812,"other_RNA."]
[{"$nulls":9},"AT3G21220","MKK5",136.75,0.56183,0.18297,3.0706,0.0021365,0.0091195,"full_name=MAP kinase kinase 5. MAP kinase kinase 5. Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4.In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission.","AT5G28330",null,81.568,-0.90275,0.2406,-3.7522,{"v":1.75E-4,"d":"1.75E-04"},{"v":0.000726,"d":"7.26E-04"},"pseudogene.","AT5G19500",null,13.252,-3.8244,0.90815,-4.2112,{"v":2.54e-05,"d":"2.54E-05"},{"v":1.02E-4,"d":"1.02E-04"},"Tryptophan/tyrosine permease. Encodes a putative amino acid transporter that localizes to the chloroplast inner envelope membrane.","AT1G03120","RAB28",626.85,-0.40048,0.12469,-3.2118,1.3189E-3,0.0051424,"full_name=responsive to abscisic acid 28. responsive to abscisic acid 28. Atrab28 plays a role in the ion cell balance during late embryogenesis and germination."]
[{"$nulls":9},"AT3G28720",null,268.2,0.4606,0.15013,3.068,0.0021547,0.0091836,"transmembrane protein.","AT5G08170","EMB1873",92.749,-0.91751,0.24477,-3.7485,{"v":0.000178,"d":"1.78E-04"},{"v":0.000735,"d":"7.35E-04"},"full_name=EMBRYO DEFECTIVE 1873. porphyromonas-type peptidyl-arginine deiminase family protein.","AT3G52560","UEV1D-4",356.93,-0.63892,0.15195,-4.2049,{"v":2.61e-05,"d":"2.61E-05"},{"v":0.000104,"d":"1.04E-04"},"full_name=ubiquitin E2 variant 1D-4. ubiquitin E2 variant 1D-4. MMZ4/UEV1D encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UEV1D can form diubiquitin and triubiquitin chains in combination with UBC13A/UBC35 in vitro. It can also functionally complement an mms2 mutation in budding yeast, both by increasing mms2 mutant viability in the presence of the DNA damaging agent MMS, and by reducing the rate of spontaneous DNA mutation. It can also rescue an mms2 ubc13 double mutant in yeast in combination with UBC13A. MMZ4/UEV1D transcripts are found in most plant organs, like the other three MMZ/UEV1 family members, but it is normally present at higher levels. In addition, MMZ4/UEV1D is the only family member whose transcripts are detected in pollen. However, MMZ4/UEV1D transcript levels do not appear to be stress-inducible. uev1d-1 mutants are more sensitive than wild type plants to the DNA damaging agent MMS in seed germination and pollen germination assays.","AT1G71460",null,124.16,0.63015,0.19642,3.2082,0.0013358,0.0052003,"Pentatricopeptide repeat (PPR-like) superfamily protein."]
[{"$nulls":9},"AT1G01100","RPP1A",620.94,-0.36349,0.11857,-3.0655,2.173E-3,9.2505E-3,"60S acidic ribosomal protein family.","AT2G42880","MPK20",693.48,-0.41047,0.10954,-3.7473,{"v":0.000179,"d":"1.79E-04"},{"v":0.000738,"d":"7.38E-04"},"full_name=MAP kinase 20. MAP kinase 20. member of MAP Kinase","AT4G33010","GLDP1",62.442,1.1839,0.28181,4.201,{"v":2.66e-05,"d":"2.66E-05"},{"v":1.06E-4,"d":"1.06E-04"},"full_name=glycine decarboxylase P-protein 1. glycine decarboxylase P-protein 1.","AT5G54670","ATK3",23.025,-1.6727,0.52174,-3.2059,0.0013462,0.0052347,"full_name=kinesin 3. kinesin 3. Encodes a truncated KatC polypeptide (KatC(207-754)), which includes the carboxyl-terminal region of KatC. This was expressed in Escherichia coli and was shown to possess microtubule-stimulated ATPase activity."]
[{"$nulls":9},"AT5G56540","AGP14",3427.1,0.38587,0.1259,3.0648,0.002178,0.0092693,"full_name=arabinogalactan protein 14. arabinogalactan protein 14. Encodes arabinogalactan protein (AGP14). Mutants exhibit longer root hairs.","AT1G25520","PML4",76.941,-0.98336,0.26242,-3.7472,{"v":0.000179,"d":"1.79E-04"},{"v":0.000738,"d":"7.38E-04"},"Uncharacterized protein family (UPF0016).","AT1G53320","TLP7",664.44,0.44428,0.10577,4.2006,{"v":2.66e-05,"d":"2.66E-05"},{"v":1.06E-4,"d":"1.06E-04"},"full_name=tubby like protein 7. tubby like protein 7. Member of TLP family","AT5G18180",null,14.979,2.0319,0.63387,3.2056,0.0013478,0.0052395,"H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein."]
[{"$nulls":9},"AT3G09980","ACIP1",567.06,-0.35771,0.11684,-3.0616,0.0022014,0.0093576,"ankyrin repeat 30A-like protein (DUF662). Encodes ACIP1, a microtubules-associated protein required for bacterial immunity.","AT1G03710",null,38.088,-1.3702,0.36588,-3.7449,{"v":0.00018,"d":"1.80E-04"},{"v":0.000744,"d":"7.44E-04"},"Cystatin/monellin superfamily protein.","AT5G14430",null,153.83,0.76702,0.18271,4.1979,{"v":2.69E-5,"d":"2.69E-05"},{"v":1.07E-4,"d":"1.07E-04"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT5G63870","PP7",225.36,-0.52938,0.16526,-3.2034,0.0013581,0.005273,"full_name=serine/threonine phosphatase 7. serine/threonine phosphatase 7. Encodes a nuclear localized serine/threonine phosphatase that appears to be regulated by redox activity and is a positive regulator of cryptochrome mediated blue light signalling."]
[{"$nulls":9},"AT1G02305","ATCATHB2",1642.3,-0.26153,0.085475,-3.0597,0.0022153,0.0094053,"Cysteine proteinases superfamily protein.","AT2G04400","IGPS",321.77,0.55763,0.14901,3.7421,{"v":0.000182,"d":"1.82E-04"},{"v":0.000751,"d":"7.51E-04"},"Aldolase-type TIM barrel family protein.","AT1G27300",null,2189.9,0.46722,0.11138,4.1949,{"v":2.73E-5,"d":"2.73E-05"},{"v":0.000109,"d":"1.09E-04"},"transmembrane protein.","AT1G30475",null,274.05,-0.44681,0.13959,-3.2008,0.0013704,0.0053145,"hypothetical protein."]
[{"$nulls":9},"AT3G16080",null,355.56,-0.40365,0.13199,-3.0583,0.0022262,0.00944,"Zinc-binding ribosomal protein family protein.","AT2G24150","HHP3",38.061,-1.2622,0.33759,-3.7388,{"v":1.85E-4,"d":"1.85E-04"},{"v":0.00076,"d":"7.60E-04"},"full_name=heptahelical protein 3. heptahelical protein 3. heptahelical transmembrane protein HHP3","AT1G05190","emb2394",44.147,1.4856,0.3545,4.1906,{"v":2.78e-05,"d":"2.78E-05"},{"v":1.11E-4,"d":"1.11E-04"},"full_name=embryo defective 2394. Ribosomal protein L6 family.","AT4G37890","EDA40",34.614,1.1832,0.3701,3.197,0.0013888,0.0053784,"full_name=embryo sac development arrest 40. Zinc finger (C3HC4-type RING finger) family protein."]
[{"$nulls":9},"AT5G45775",null,578.43,-0.36672,0.12,-3.056,0.0022432,0.0094959,"Ribosomal L5P family protein.","AT3G48360","BT2",4.6182,-5.4912,1.47,-3.7356,{"v":0.000187,"d":"1.87E-04"},{"v":0.000769,"d":"7.69E-04"},"full_name=BTB and TAZ domain protein 2. BTB and TAZ domain protein 2. encodes a protein (BT2) that is an essential component of the TAC1-mediated telomerase activation pathway. Acts redundantly with BT3 and BT1 during female gametophyte development and with BT3 during male gametophyte development. BT2 also mediates multiple responses to nutrients, stresses, and hormones.","AT2G01270","QSOX2",330.73,0.51338,0.12273,4.1831,{"v":2.88e-05,"d":"2.88E-05"},{"v":0.000114,"d":"1.14E-04"},"full_name=quiescin-sulfhydryl oxidase 2. quiescin-sulfhydryl oxidase 2. Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the quiescin-sulfhydryl oxidase (QSOX) family, which possess an Erv1-like domain at the COOH terminus in addition to a TRX domain.","AT5G27400",null,271.96,-0.45446,0.14234,-3.1927,0.0014095,5.45E-3,"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT5G27410.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). Note that the At5g27410.2 gene model (TAIR10) of the adjacent locus has been obsoleted due to the lack of experimental support."]
[{"$nulls":9},"AT5G19690","STT3A",386.51,-0.40864,0.13398,-3.0501,2.2875E-3,0.0096694,"full_name=staurosporin and temperature sensitive 3-like A. staurosporin and temperature sensitive 3-like A. encodes an oligosaccharyl transferase involved response to high salt. Mutants are hypersensitive to high salt conditions","AT1G01710",null,384.02,0.47273,0.1266,3.734,{"v":0.000189,"d":"1.89E-04"},{"v":0.000772,"d":"7.72E-04"},"acyl-CoA thioesterase II.","AT2G22942",null,5.7374,-6.1195,1.4643,-4.1791,{"v":2.93e-05,"d":"2.93E-05"},{"v":1.16E-4,"d":"1.16E-04"},"growth factor.","AT5G48810","CB5-D",453.19,-0.35964,0.11277,-3.1892,0.0014266,0.0055082,"full_name=cytochrome B5 isoform D. cytochrome B5 isoform D. Encodes a cytochrome b5 isoform that localizes to the ER. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro and the protein appears to be subject to glycosylation."]
[{"$nulls":9},"AT5G16620","TIC40",317.15,0.41384,0.13582,3.0469,2.3124E-3,0.0097626,"full_name=translocon at the inner envelope membrane of chloroplasts 40. hydroxyproline-rich glycoprotein family protein. chloroplast protein import (Tic40)","AT1G03290",null,100.05,-1.0273,0.27533,-3.7312,{"v":0.000191,"d":"1.91E-04"},{"v":0.00078,"d":"7.80E-04"},"ELKS/Rab6-interacting/CAST family protein.","AT2G37620","ACT1",55.107,-1.1819,0.28302,-4.1759,{"v":2.97E-5,"d":"2.97E-05"},{"v":1.17E-4,"d":"1.17E-04"},"full_name=actin 1. actin 1. Member of the actin gene family. Expressed in mature pollen.","AT1G29320",null,432.78,0.38207,0.11986,3.1878,1.4337E-3,0.0055288,"Transducin/WD40 repeat-like superfamily protein."]
[{"$nulls":9},"AT4G38495","EEN",114.86,-0.6021,0.19767,-3.0459,0.0023197,0.0097816,"chromatin-remodeling complex subunit.","AT1G68070",null,351.56,0.55798,0.14962,3.7292,{"v":1.92E-4,"d":"1.92E-04"},{"v":7.85E-4,"d":"7.85E-04"},"Zinc finger, C3HC4 type (RING finger) family protein.","AT4G31310",null,53.68,1.379,0.33039,4.1739,{"v":2.99e-05,"d":"2.99E-05"},{"v":1.18E-4,"d":"1.18E-04"},"AIG2-like (avirulence induced gene) family protein.","AT3G12050",null,526.73,0.34999,0.10991,3.1843,1.451E-3,0.0055887,"Aha1 domain-containing protein."]
[{"$nulls":9},"AT5G45100","BRG1",110.49,0.6701,0.22025,3.0424,0.0023472,0.0098831,"full_name=BOI-related gene 1. SBP (S-ribonuclease binding protein) family protein. Encodes one of the BRGs (BOI-related gene) involved in resistance to Botrytis cinerea.","AT5G65495",null,122.21,0.77103,0.20708,3.7234,{"v":0.000197,"d":"1.97E-04"},{"v":0.000802,"d":"8.02E-04"},"hypothetical protein.","AT5G40160","EMB506",138.06,0.86915,0.20834,4.1719,{"v":3.02e-05,"d":"3.02E-05"},{"v":0.000119,"d":"1.19E-04"},"full_name=embryo defective 506. Ankyrin repeat family protein. Encodes ankyrin repeat protein EMB506. Mutations in this locus result in embryo lethality.","AT4G19380",null,43.545,-1.0209,0.32095,-3.1808,1.4685E-3,0.0056478,"Long-chain fatty alcohol dehydrogenase family protein."]
[{"$nulls":9},"AT2G39970","PXN",336.16,0.39213,0.12896,3.0408,0.0023593,0.0099247,"full_name=peroxisomal NAD carrier. Mitochondrial substrate carrier family protein. Encodes peroxisomal membrane protein 38 (PMP38). Mutation in this protein results in enlargement of peroxisomes. Delivers NAD+ for optimal fatty acid degradation during storage oil mobilization.","AT1G48260","CIPK17",4.0538,5.6571,1.5197,3.7224,{"v":0.000197,"d":"1.97E-04"},8.0488999999999995E-4,"full_name=CBL-interacting protein kinase 17. CBL-interacting protein kinase 17. Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.21), which has also been reported as a member of the CBL-interacting protein kinases (CIPK17).","AT2G28130","ASAP1",180.92,-0.70306,0.16857,-4.1708,{"v":3.03e-05,"d":"3.03E-05"},{"v":1.2E-4,"d":"1.20E-04"},"actin protein 2/3 complex subunit-like protein.","AT5G58980","ATNCER3",169.72,-0.54331,0.17093,-3.1785,1.4805E-3,0.0056886,"Neutral/alkaline non-lysosomal ceramidase."]
[{"$nulls":18},"AT4G33400",null,32.177,1.3731,0.36919,3.7194,{"v":0.0002,"d":"2.00E-04"},{"v":0.000813,"d":"8.13E-04"},"Vacuolar import/degradation, Vid27-related protein.","AT4G03200",null,3765.6,0.37356,0.089659,4.1664,{"v":3.09e-05,"d":"3.09E-05"},{"v":1.22E-4,"d":"1.22E-04"},"catalytics.","AT4G27640","IMB4",305.93,0.43247,0.13626,3.1738,0.0015043,0.0057705,"ARM repeat superfamily protein."]
[{"$nulls":18},"AT5G41770",null,301.51,0.52355,0.14091,3.7156,{"v":2.03E-4,"d":"2.03E-04"},{"v":0.000824,"d":"8.24E-04"},"crooked neck protein, putative / cell cycle protein.","AT1G80310","MOT2",54.228,1.2629,0.30344,4.1619,{"v":3.16e-05,"d":"3.16E-05"},{"v":0.000124,"d":"1.24E-04"},"full_name=molybdate transporter 2. sulfate transmembrane transporter. MOT2 encodes a molybdate transporter which locates to the vacuolar membrane. Loss-of-function (knock out) mutants show elevated molydate levels in rosette leaves and in fully senescent leaves, but decreased MoO4 levels in seeds. Under conditions of molybdate deficiency leaves from mot2::tDNA mutants show strongly reduced nitrate reductase activity. The mot2 gene is slightly expressed in young and mature leaves, but strongly in senescing leaves. This observation points to a function of MOT2 in molybdate transfer from leaves to seeds during plant senescence.","AT1G02405",null,38.921,-1.0683,0.33705,-3.1697,1.526E-3,0.0058453,"proline-rich family protein."]
[{"$nulls":18},"AT3G53400",null,198.9,-0.61127,0.16462,-3.7133,{"v":2.05E-4,"d":"2.05E-04"},{"v":0.000831,"d":"8.31E-04"},"peptide upstream protein.","AT2G16070","PDV2",512.45,0.46685,0.11229,4.1577,{"v":3.21e-05,"d":"3.21E-05"},{"v":1.26E-4,"d":"1.26E-04"},"full_name=PLASTID DIVISION2. plastid division2. An integral outer envelope membrane protein (its homolog in A thaliana PDV1), component of the plastid division machinery. Similar to ARC6, PDV2 localizes to a continuous ring at the division site in wild-type plants. PDV1 and PDV2 are required for localization of ARC5 at the chloroplast division site.","AT1G21310","EXT3",3.578,5.1454,1.6246,3.1672,0.0015392,0.0058885,"full_name=extensin 3. extensin 3. Encodes extensin 3."]
[{"$nulls":18},"AT2G39080","EMB2799",32.844,-1.3874,0.37371,-3.7124,{"v":2.05E-4,"d":"2.05E-04"},{"v":0.000833,"d":"8.33E-04"},"full_name=EMBRYO DEFECTIVE 2799. NAD(P)-binding Rossmann-fold superfamily protein.","AT3G63120","CYCP1;1",42.591,-1.4761,0.35517,-4.156,{"v":3.24e-05,"d":"3.24E-05"},{"v":1.27E-4,"d":"1.27E-04"},"full_name=cyclin p1;1. cyclin p1;1.","AT2G27200","LSG1-1",177.25,0.54521,0.17217,3.1668,0.0015414,0.0058957,"P-loop containing nucleoside triphosphate hydrolases superfamily protein."]
[{"$nulls":18},"AT3G23580","RNR2A",485.94,0.44145,0.11898,3.7105,{"v":0.000207,"d":"2.07E-04"},{"v":0.000839,"d":"8.39E-04"},"full_name=ribonucleotide reductase 2A. ribonucleotide reductase 2A. Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes (RNR2A). Functionally redundant with the ribonucleotide reductase TSO2. mRNA was shown to specifically accumulate during the S-phase of the cell cycle in synchronized tobacco BY2 cells. Critical for cell cycle progression, DNA damage repair and plant development.","AT3G13470","Cpn60beta2",192.36,0.6932,0.16696,4.1519,{"v":3.3e-05,"d":"3.30E-05"},{"v":0.000129,"d":"1.29E-04"},"full_name=chaperonin-60beta2. TCP-1/cpn60 chaperonin family protein. Encodes a subunit of chloroplasts chaperonins that are involved in mediating the folding of newly synthesized, translocated, or stress-denatured proteins. Cpn60 subunits are: Cpn60alpha1 (At2g28000), AtCpn60alpha2 (At5g18820), AtCpn60beta1 (At1g55490), AtCpn60beta2 (At3g13470), AtCpn60beta3 (At5g56500), AtCpn60beta4 (At1g26230).","AT5G53570","RABGAP22",263.45,0.43567,0.13778,3.162,0.0015668,0.0059854,"Ypt/Rab-GAP domain of gyp1p superfamily protein."]
[{"$nulls":18},"AT3G15110",null,58.312,-1.0625,0.28672,-3.7059,{"v":0.000211,"d":"2.11E-04"},{"v":8.52E-4,"d":"8.52E-04"},"transmembrane protein.","AT1G12280","SUMM2",31.985,1.5962,0.38497,4.1462,{"v":3.38e-05,"d":"3.38E-05"},{"v":0.000132,"d":"1.32E-04"},"full_name=suppressor of mkk1 mkk2 2. LRR and NB-ARC domains-containing disease resistance protein. Encodes a NB-LRR protein SUMM2 involved in defense response to bacterium.","AT3G21280","UBP7",133.96,0.6137,0.19437,3.1575,1.5915E-3,0.0060668,"full_name=ubiquitin-specific protease 7. ubiquitin carboxyl-terminal hydrolase. Encodes a ubiquitin-specific protease."]
[{"$nulls":18},"AT2G25250",null,92.585,-0.8434,0.22774,-3.7033,{"v":2.13E-4,"d":"2.13E-04"},{"v":0.00086,"d":"8.60E-04"},"serine/arginine repetitive matrix-like protein.","AT5G52240","MSBP1",492.79,0.43858,0.10584,4.1438,{"v":3.42e-05,"d":"3.42E-05"},{"v":1.34E-4,"d":"1.34E-04"},"full_name=membrane steroid binding protein 1. membrane steroid binding protein 1. Encodes a protein with similarity to progesterone-binding proteins in animals. Has been shown to bind steroids in vitro. Expressed in aerial portions of the plant excluding mature flowers and siliques. Antisense experiments suggest a role in inhibition of hypocotyl cell elongation. Expression is suppressed light grown seedlings transferred to the dark.","AT1G33102",null,92.709,-0.71318,0.22597,-3.1561,0.001599,0.006091,"hypothetical protein."]
[{"$nulls":18},"AT1G51940","LYK3",57.357,-1.1538,0.31178,-3.7009,{"v":0.000215,"d":"2.15E-04"},{"v":0.000868,"d":"8.68E-04"},"full_name=LysM-containing receptor-like kinase 3. protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. Encodes a LysM-containing receptor-like kinase. Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant.","AT3G19120",null,218.78,0.7041,0.17008,4.1397,{"v":3.48e-05,"d":"3.48E-05"},{"v":1.36E-4,"d":"1.36E-04"},"PIF / Ping-Pong family of plant transposase.","AT1G80400",null,330.03,-0.40443,0.12821,-3.1544,0.0016084,0.0061196,"RING/U-box superfamily protein."]
[{"$nulls":18},"AT3G50040",null,26.093,1.618,0.43772,3.6965,{"v":0.000219,"d":"2.19E-04"},{"v":0.000882,"d":"8.82E-04"},"hypothetical protein.","AT2G34160","IRP7",221.33,-0.62038,0.14999,-4.1361,{"v":3.53e-05,"d":"3.53E-05"},{"v":0.000138,"d":"1.38E-04"},"Alba DNA/RNA-binding protein.","AT5G48140",null,25.697,-2.3113,0.73352,-3.1509,1.6275E-3,0.0061834,"Pectin lyase-like superfamily protein."]
[{"$nulls":18},"AT2G43535",null,115.47,-0.99268,0.26866,-3.695,{"v":0.00022,"d":"2.20E-04"},{"v":0.000886,"d":"8.86E-04"},"Scorpion toxin-like knottin superfamily protein. Encodes a defensin-like (DEFL) family protein.","AT1G64150","PAM71",13.174,-4.1195,0.99733,-4.1306,{"v":3.62e-05,"d":"3.62E-05"},{"v":0.000141,"d":"1.41E-04"},"Uncharacterized protein family (UPF0016).","AT5G44610","MAP18",9.9059,-2.9154,0.92577,-3.1491,0.0016376,0.0062144,"full_name=microtubule-associated protein 18. microtubule-associated protein 18. Encodes a protein with seven repeated VEEKK motifs. RNAi and overexpression experiments suggest that the gene is not involved in cell division but might be consequential for cell shape of epidermal and cortical cells. The protein encoded by this gene binds to cortical microtubules and inhibits tubulin polymerization. Associates to the plasma membrane and interacts with calmodulin and phosphatidylinositol phosphates, indicating an involvement in cellular signal transduction. Expression is enhanced by abiotic and hormonal factors. Induced during senescence."]
[{"$nulls":18},"AT1G64180",null,232.02,0.57336,0.1552,3.6943,{"v":0.000221,"d":"2.21E-04"},{"v":0.000887,"d":"8.87E-04"},"intracellular protein transport protein USO1-like protein.","AT3G62170","VGDH2",30.71,3.5852,0.86847,4.1282,{"v":3.66e-05,"d":"3.66E-05"},{"v":0.000142,"d":"1.42E-04"},"full_name=VANGUARD 1 homolog 2. VANGUARD-like protein.","AT3G27330",null,337.82,-0.38584,0.12269,-3.1447,1.6626E-3,0.0063017,"zinc finger (C3HC4-type RING finger) family protein."]
[{"$nulls":18},"AT4G00490","BAM2",28.785,-1.5458,0.41889,-3.6902,{"v":2.24E-4,"d":"2.24E-04"},{"v":0.0009,"d":"9.00E-04"},"full_name=beta-amylase 2. beta-amylase 2. Encodes a chloroplast beta-amylase. The enzyme activity is very weak compared to BAM1 and BAM3. Mutant of BAM2 has no visible phenotype.","AT3G48890","MAPR3",895.55,0.39709,0.096257,4.1253,{"v":3.7e-05,"d":"3.70E-05"},{"v":1.44E-4,"d":"1.44E-04"},"full_name=membrane-associated progesterone binding protein 3. membrane-associated progesterone binding protein 3. putative progesterone-binding protein homolog (Atmp2) mRNA,","AT4G24480",null,10.158,2.843,0.90481,3.1421,1.6772E-3,0.0063464,"Protein kinase superfamily protein."]
[{"$nulls":18},"AT3G47860","CHL",30.182,-1.5218,0.41258,-3.6885,{"v":0.000226,"d":"2.26E-04"},{"v":0.000905,"d":"9.05E-04"},"full_name=chloroplastic lipocalin. chloroplastic lipocalin. Encodes a chloroplastic lipocalin AtCHL. Located in thylakoid lumen. Involved in the protection of thylakoidal membrane lipids against reactive oxygen species, especially singlet oxygen, produced upon excess light.","AT4G29160","SNF7.1",616.92,-0.48782,0.11835,-4.1217,{"v":3.76e-05,"d":"3.76E-05"},{"v":1.46E-4,"d":"1.46E-04"},"SNF7 family protein.","AT3G51940",null,266.21,0.4637,0.14769,3.1396,0.0016915,6.3929E-3,"oxidoreductase/transition metal ion-binding protein."]
[{"$nulls":18},"AT5G24120","SIGE",319.56,-0.78285,0.21235,-3.6865,{"v":0.000227,"d":"2.27E-04"},{"v":0.000911,"d":"9.11E-04"},"full_name=sigma factor E. sigma factor E. Encodes a specialized sigma factor that functions in regulation of plastid genes and is responsible for the light-dependent transcription at the psbD LRP. Activation of SIG5 is dependent upon blue light and mediated by cryptochromes.","AT1G18460","ALPHA/BETA-HYDROLASE",186.11,-0.75257,0.18267,-4.1198,{"v":3.79E-5,"d":"3.79E-05"},{"v":1.47E-4,"d":"1.47E-04"},"alpha/beta-Hydrolases superfamily protein.","AT5G20290",null,2524.3,0.27389,0.087266,3.1386,0.0016977,0.0064086,"Ribosomal protein S8e family protein."]
[{"$nulls":18},"AT4G32290",null,1505.8,-0.45107,0.12248,-3.6827,{"v":2.31E-4,"d":"2.31E-04"},{"v":0.000923,"d":"9.23E-04"},"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein.","AT2G04940",null,213.76,0.62536,0.15194,4.1159,{"v":3.86e-05,"d":"3.86E-05"},{"v":0.000149,"d":"1.49E-04"},"scramblase-like protein.","AT3G03950","ECT1",678.95,0.32126,0.1024,3.1374,0.0017046,0.006425,"full_name=evolutionarily conserved C-terminal region 1. evolutionarily conserved C-terminal region 1. Physically interacts with CIPK1. Located in the nucleus."]
[{"$nulls":18},"AT5G15090","VDAC3",1205.6,0.37766,0.10262,3.6802,{"v":2.33E-4,"d":"2.33E-04"},{"v":0.000931,"d":"9.31E-04"},"full_name=voltage dependent anion channel 3. voltage dependent anion channel 3. Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. Purified VDAC3 is shown to have voltage-dependent anion channel activity.","AT3G62580",null,398.25,-0.48378,0.11762,-4.1132,{"v":3.9e-05,"d":"3.90E-05"},{"v":0.000151,"d":"1.51E-04"},"Late embryogenesis abundant protein (LEA) family protein.","AT5G39880",null,44.566,-2.0519,0.65439,-3.1355,0.0017153,0.0064585,"transmembrane protein."]
[{"$nulls":18},"AT5G09620",null,451.08,-0.5004,0.136,-3.6795,{"v":2.34E-4,"d":"2.34E-04"},{"v":0.000934,"d":"9.34E-04"},"Octicosapeptide/Phox/Bem1p family protein.","AT2G02740","WHY3",160.02,0.79194,0.19267,4.1104,{"v":3.95e-05,"d":"3.95E-05"},{"v":0.000153,"d":"1.53E-04"},"full_name=WHIRLY 3. ssDNA-binding transcriptional regulator. Encodes a homolog of the potato p24 protein. It shares the conserved KGKAAL domain, a putative DNA-binding domain, with potato p24 and is localized to the plastid and not the nucleus.","AT4G32520","SHM3",965.11,0.31569,0.10069,3.1354,1.7159E-3,0.0064593,"full_name=serine hydroxymethyltransferase 3. serine hydroxymethyltransferase 3. Encodes a serine hydroxymethyltransferase SHMT3 located in the plastid."]
[{"$nulls":18},"AT2G41530","SFGH",232.25,-0.70611,0.19206,-3.6766,{"v":0.000236,"d":"2.36E-04"},{"v":0.000943,"d":"9.43E-04"},"full_name=S-formylglutathione hydrolase. S-formylglutathione hydrolase. Encodes a protein with S-formylglutathione hydrolase activity.","AT5G58320","NET4A",22.982,-1.9823,0.4825,-4.1083,{"v":3.99e-05,"d":"3.99E-05"},{"v":1.54E-4,"d":"1.54E-04"},"full_name=Networked 4A. Kinase interacting (KIP1-like) family protein. Encodes a member of the NET superfamily of proteins that potentially couples different membranes to the actin cytoskeleton in plant cells. It colocalizes with filamentous actin and is localized to the tonoplast membrane. It is expressed in the epidermis of the root meristem and the early expansion zone.","AT3G52070",null,72.362,-0.82545,0.26352,-3.1324,0.001734,0.0065196,"RNA/RNP complex-1-interacting phosphatase."]
[{"$nulls":18},"AT5G39500","GNL1",156.32,-0.65227,0.17765,-3.6717,{"v":2.41E-4,"d":"2.41E-04"},{"v":0.00096,"d":"9.60E-04"},"full_name=GNOM-like 1. GNOM-like 1. Encodes GNOM-LIKE1/ERMO1, a member of ARF-GEF family. Required for endoplasmic reticulum (ER) morphology.","AT3G02920","RPA32B",64.244,1.1291,0.27524,4.1021,{"v":4.09e-05,"d":"4.09E-05"},{"v":0.000158,"d":"1.58E-04"},"Replication protein A, subunit RPA32.","AT1G09150",null,296.09,-0.4087,0.13068,-3.1274,1.7637E-3,0.0066187,"pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein."]
[{"$nulls":18},"AT5G20140","HBP5",106.39,-0.83,0.22621,-3.6692,{"v":2.43E-4,"d":"2.43E-04"},{"v":9.68E-4,"d":"9.68E-04"},"full_name=haem-binding protein 5. SOUL heme-binding family protein.","AT5G59690",null,265.29,0.57375,0.13992,4.1005,{"v":4.12e-05,"d":"4.12E-05"},{"v":0.000159,"d":"1.59E-04"},"Histone superfamily protein.","AT1G61580","RPL3B",90.891,0.7593,0.24299,3.1248,0.0017793,0.0066708,"full_name=R-protein L3 B. R-protein L3 B."]
[{"$nulls":18},"AT5G53140",null,589.8,0.44522,0.12139,3.6678,{"v":0.000245,"d":"2.45E-04"},{"v":0.000972,"d":"9.72E-04"},"Protein phosphatase 2C family protein.","AT1G09100","RPT5B",346.44,0.60782,0.14838,4.0963,{"v":4.2e-05,"d":"4.20E-05"},{"v":0.000161,"d":"1.61E-04"},"full_name=26S proteasome AAA-ATPase subunit RPT5B. 26S proteasome AAA-ATPase subunit RPT5B. Encodes RPT5b (Regulatory Particle 5b), one of the six AAA-ATPases of the proteasome regulatory particle. Essential for gametophyte development. In Arabidopsis, the RPT5 subunit is encoded by two highly homologous genes, RPT5a and RPT5b. RPT5a and RPT5b show accession-dependent functional redundancy. In Wassilewskija (Ws) accession: mutant alleles of RPT5a displayed 50% pollen lethality, indicating that RPT5a is essential for male gametophyte development. In the Columbia (Col) accession, a rpt5a mutant allele did not display such a phenotype because the RPT5b Col allele complements the rpt5a defect in the male gametophyte, whereas the RPT5b Ws allele does not. Double rpt5a rpt5b mutants in Col background showed a complete male and female gametophyte lethal phenotype.","AT1G51760","IAR3",221.01,0.49184,0.15757,3.1215,0.0017995,0.0067385,"full_name=IAA-ALANINE RESISTANT 3. peptidase M20/M25/M40 family protein. encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers."]
[{"$nulls":18},"AT3G25560","NIK2",8.7915,-3.82,1.0419,-3.6666,{"v":0.000246,"d":"2.46E-04"},{"v":0.000976,"d":"9.76E-04"},"full_name=NSP-interacting kinase 2. NSP-interacting kinase 2.","AT3G23325",null,75.699,-1.0162,0.24832,-4.0921,{"v":4.27e-05,"d":"4.27E-05"},{"v":1.64E-4,"d":"1.64E-04"},"Splicing factor 3B subunit 5/RDS3 complex subunit 10.","AT1G63780","IMP4",396.41,0.36498,0.11703,3.1187,0.0018167,0.0067936,"Ribosomal RNA processing Brix domain protein. Small nucleolar ribonucleoprotein protein involved in ribosomal RNA processing. Located in nucleolus and cajal bodies."]
[{"$nulls":18},"AT3G26340",null,210.06,0.69665,0.19011,3.6645,{"v":0.000248,"d":"2.48E-04"},{"v":0.000982,"d":"9.82E-04"},"N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein.","AT2G41720","EMB2654",205.86,0.94424,0.23103,4.0871,{"v":4.37e-05,"d":"4.37E-05"},{"v":0.000167,"d":"1.67E-04"},"full_name=EMBRYO DEFECTIVE 2654. Tetratricopeptide repeat (TPR)-like superfamily protein.","AT2G26540","HEMD",263.85,-0.4163,0.13356,-3.1169,1.8276E-3,6.8255E-3,"uroporphyrinogen-III synthase family protein. Encodes a uroporphyrinogen-III synthase involved in tetrapyrrole biosynthesis. The protein localizes to the chloroplast. Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype"]
[{"$nulls":18},"AT5G66920","sks17",9.3473,-3.204,0.87461,-3.6633,{"v":0.000249,"d":"2.49E-04"},{"v":0.000986,"d":"9.86E-04"},"full_name=SKU5 similar 17. SKU5 similar 17.","AT5G59020",null,12.32,-3.0859,0.75549,-4.0847,{"v":4.41e-05,"d":"4.41E-05"},{"v":0.000169,"d":"1.69E-04"},"hepatocyte growth factor activator, putative (DUF3527).","AT5G43100",null,199.24,0.49547,0.15914,3.1134,1.8494E-3,0.0068995,"Eukaryotic aspartyl protease family protein."]
[{"$nulls":18},"AT3G60210","GROES",141.85,0.78216,0.21358,3.6621,{"v":0.00025,"d":"2.50E-04"},{"v":0.000989,"d":"9.89E-04"},"GroES-like family protein.","AT4G34000","ABF3",5.1489,-5.9725,1.4639,-4.08,{"v":4.5e-05,"d":"4.50E-05"},{"v":0.000172,"d":"1.72E-04"},"full_name=abscisic acid responsive elements-binding factor 3. abscisic acid responsive elements-binding factor 3. Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.","AT1G21580","SOP1",1121.9,-0.45876,0.1475,-3.1103,0.0018689,0.0069624,"Zinc finger C-x8-C-x5-C-x3-H type family protein."]
[{"$nulls":18},"AT3G44590","RPP2D",102.9,0.7621,0.20844,3.6563,{"v":0.000256,"d":"2.56E-04"},1.0106E-3,"60S acidic ribosomal protein family.","AT1G65820",null,1735,0.42894,0.10524,4.0758,{"v":4.59e-05,"d":"4.59E-05"},{"v":1.75E-4,"d":"1.75E-04"},"microsomal glutathione s-transferase.","AT3G29320","PHS1",20.787,1.5571,0.50135,3.1058,1.8974E-3,0.0070587,"full_name=alpha-glucan phosphorylase 1. Glycosyl transferase, family 35. Encodes a plastidic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for maltooligosaccharides, such as maltoheptaose."]
[{"$nulls":18},"AT4G33540",null,57.903,1.0803,0.2957,3.6533,{"v":0.000259,"d":"2.59E-04"},1.0211E-3,"metallo-beta-lactamase family protein.","AT1G73120",null,15.872,-2.3975,0.58877,-4.072,{"v":4.66e-05,"d":"4.66E-05"},{"v":0.000178,"d":"1.78E-04"},"F-box/RNI superfamily protein.","AT3G27325",null,220.66,0.50629,0.16313,3.1037,1.9115E-3,0.0071029,"hydrolases, acting on ester bond."]
[{"$nulls":18},"AT5G48820","ICK6",9.4929,2.8685,0.78552,3.6517,{"v":2.61E-4,"d":"2.61E-04"},0.0010262,"full_name=inhibitor/interactor with cyclin-dependent kinase. inhibitor/interactor with cyclin-dependent kinase. Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type and CDC2A cyclins and may inhibit cell cycle. Seven KRP genes were found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization.","AT1G16300","GAPCP-2",133.9,0.79511,0.19546,4.0679,{"v":4.74E-5,"d":"4.74E-05"},{"v":0.000181,"d":"1.81E-04"},"full_name=glyceraldehyde-3-phosphate dehydrogenase of plastid 2. glyceraldehyde-3-phosphate dehydrogenase of plastid 2. Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots.","AT3G26165","CYP71B18",495.94,-0.35309,0.11387,-3.1008,1.9302E-3,0.0071625,"full_name=cytochrome P450, family 71, subfamily B, polypeptide 18. pseudogene. putative cytochrome P450."]
[{"$nulls":18},"AT4G13540","ADR",14.071,-2.4317,0.6665,-3.6484,{"v":0.000264,"d":"2.64E-04"},0.001038,"golgin family A protein.","AT5G65260",null,198.78,0.78273,0.19271,4.0618,{"v":4.87e-05,"d":"4.87E-05"},{"v":1.85E-4,"d":"1.85E-04"},"RNA-binding (RRM/RBD/RNP motifs) family protein.","AT3G47420","G3Pp1",8.7257,-3.1194,1.0069,-3.098,0.001948,0.0072201,"full_name=Glycerol-3-phosphate permease 1. putative glycerol-3-phosphate transporter 1. Encodes a Pi starvation-responsive protein AtPS3. A member of the phosphate starvation-induced glycerol-3-phosphate permease gene family: AT3G47420(G3Pp1), AT4G25220(G3Pp2), AT1G30560(G3Pp3), AT4G17550(G3Pp4) and AT2G13100(G3Pp5). Its expression is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots."]
[{"$nulls":18},"AT3G54140","PTR1",563.87,0.47144,0.12923,3.648,{"v":0.000264,"d":"2.64E-04"},0.0010395,"full_name=peptide transporter 1. peptide transporter 1. Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. GFP-tagged PTR1 localizes to the plasma membrane and has 8 to 11 predicted transmembrane domains. PTR1 is expressed in a number of different vascular tissues throughout the plant based on promoter:GUS expression analysis. ptr1 mutants have a lower dry weight than wild type plants when both are grown with Pro-Ala or Ala-Ala dipeptides as their nitrogen source, suggesting that PTR1 plays a role in dipeptide uptake in the roots. Furthermore N content of ptr1 mutants is lower than that of wild type plants when grown with Pro-Ala or a mixture of dipeptides as nitrogen source","AT3G06350","MEE32",119.8,-0.84773,0.20873,-4.0613,{"v":4.88E-5,"d":"4.88E-05"},{"v":0.000186,"d":"1.86E-04"},"full_name=MATERNAL EFFECT EMBRYO ARREST 32. dehydroquinate dehydratase, putative / shikimate dehydrogenase. Encodes a bi-functional dehydroquinate-shikimate dehydrogenase enzyme that catalyzes two steps in the chorismate biosynthesis pathway.","AT5G54580","ORRM2",245.37,0.44961,0.14515,3.0975,0.0019518,0.0072324,"RNA-binding (RRM/RBD/RNP motifs) family protein."]
[{"$nulls":18},"AT3G47000",null,72.097,-1.1108,0.30488,-3.6435,{"v":0.000269,"d":"2.69E-04"},1.0549000000000001E-3,"Glycosyl hydrolase family protein.","AT1G18470","PPRT3",230.52,-0.65462,0.16148,-4.0539,{"v":5.04e-05,"d":"5.04E-05"},{"v":0.000191,"d":"1.91E-04"},"Transmembrane Fragile-X-F-associated protein.","AT3G03590","SWIB4",96.789,-0.73058,0.23635,-3.0911,0.001994,0.0073716,"SWIB/MDM2 domain superfamily protein."]
[{"$nulls":18},"AT3G09890",null,126.29,0.71749,0.19692,3.6435,{"v":0.000269,"d":"2.69E-04"},1.0549000000000001E-3,"Ankyrin repeat family protein.","AT2G20010",null,97.606,-0.87324,0.21544,-4.0533,{"v":5.05e-05,"d":"5.05E-05"},{"v":0.000191,"d":"1.91E-04"},"Gls protein (DUF810).","AT3G21710","VUP1",6.1525,-3.7129,1.2012,-3.091,0.0019945,0.007372,"transmembrane protein."]
[{"$nulls":18},"AT1G12430","ARK3",251.41,-0.54051,0.14845,-3.641,{"v":2.72E-4,"d":"2.72E-04"},0.0010641,"full_name=armadillo repeat kinesin 3. armadillo repeat kinesin 3. Encodes the kinesin-like protein PAK has an Armadillo motif tail and is involved in guard cell development in Arabidopsis (from Genbank record AF159052).However, no defect in stomatal complexes has been observed in loss of function mutations. It accumulates at the preprophase band (PPB) in a cell-cycle and microtubule-dependent manner and is most highly expressed in cells where the placement of the division plane (early embryogenesis, stomatal lineages) is critical.","AT3G50550",null,79.781,-0.98704,0.24372,-4.0499,{"v":5.12e-05,"d":"5.12E-05"},{"v":1.94E-4,"d":"1.94E-04"},"hypothetical protein.","AT5G53560","CB5-E",629.64,0.31596,0.10229,3.0888,2.0095E-3,7.417E-3,"full_name=cytochrome B5 isoform E. cytochrome B5 isoform E. Encodes a cytochrome b5 isoform that can be reduced by AtCBR, a cytochrome b5 reductase."]
[{"$nulls":18},"AT1G55675",null,215.02,0.59433,0.16331,3.6393,{"v":0.000273,"d":"2.73E-04"},0.0010699,"transmembrane protein.","AT3G47540",null,5.1963,-5.992,1.4804,-4.0476,{"v":5.17e-05,"d":"5.17E-05"},{"v":0.000196,"d":"1.96E-04"},"Chitinase family protein.","AT1G79160",null,102.99,0.6764,0.21907,3.0876,0.002018,0.0074397,"filamentous hemagglutinin transporter."]
[{"$nulls":18},"AT5G49500",null,93.422,-0.81969,0.22541,-3.6365,{"v":0.000276,"d":"2.76E-04"},0.0010801,"Signal recognition particle, SRP54 subunit protein.","AT2G45520",null,362.56,0.49168,0.12153,4.0458,{"v":5.21e-05,"d":"5.21E-05"},{"v":0.000197,"d":"1.97E-04"},"coiled-coil protein.","AT2G24755",null,159.3,-0.54712,0.17729,-3.086,0.0020284,0.0074694,"Natural antisense transcript overlaps with AT2G24750 and AT2G24760. Potential natural antisense gene, locus overlaps with AT2G24750 and AT2G24760 Natural antisense transcript overlaps with AT2G24750 and AT2G24760"]
[{"$nulls":18},"AT5G57950",null,128.35,0.70851,0.19502,3.633,{"v":0.00028,"d":"2.80E-04"},0.0010935,"26S proteasome regulatory subunit.","AT2G41290","SSL2",72.269,-1.2626,0.31259,-4.0391,{"v":5.37e-05,"d":"5.37E-05"},{"v":2.02E-4,"d":"2.02E-04"},"full_name=strictosidine synthase-like 2. strictosidine synthase-like 2. Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.","AT3G23080",null,109.64,-0.65773,0.21341,-3.082,0.002056,0.0075605,"Polyketide cyclase/dehydrase and lipid transport superfamily protein."]
[{"$nulls":18},"AT5G07120","SNX2b",118.02,-0.74443,0.20493,-3.6326,{"v":2.81E-4,"d":"2.81E-04"},1.0941E-3,"full_name=sorting nexin 2B. sorting nexin 2B. Encodes sorting nexin SNX2b. SNX2b is peripherally associated with membranes. Involved in vesicular trafficking from endosomes to the vacuole.","AT4G35890","LARP1c",385.58,-0.47888,0.11863,-4.0369,{"v":5.42e-05,"d":"5.42E-05"},{"v":2.04E-4,"d":"2.04E-04"},"full_name=La related protein 1c. winged-helix DNA-binding transcription factor family protein. Encodes a cytoplasmic LAM domain containing protein that is involved in leaf senescence.","AT3G09470","ATUNC93",290.02,-0.3985,0.12936,-3.0806,2.0661E-3,0.0075906,"Major facilitator superfamily protein."]
[{"$nulls":18},"AT1G02930","GSTF6",28.704,1.4129,0.38925,3.6297,{"v":0.000284,"d":"2.84E-04"},0.0011046,"full_name=glutathione S-transferase 6. glutathione S-transferase 6. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).","AT1G33400","TPR9",160.46,0.73516,0.18235,4.0316,{"v":5.54e-05,"d":"5.54E-05"},{"v":0.000208,"d":"2.08E-04"},"full_name=tetratricopeptide repeat 9. Tetratricopeptide repeat (TPR)-like superfamily protein. Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","AT1G04480",null,368.18,0.39213,0.12754,3.0746,0.0021077,0.0077293,"Ribosomal protein L14p/L23e family protein."]
[{"$nulls":18},"AT1G69570","CDF5",65.179,-0.97217,0.26811,-3.626,{"v":0.000288,"d":"2.88E-04"},0.0011192,"Dof-type zinc finger DNA-binding family protein.","AT1G26520",null,77.295,1.126,0.27944,4.0297,{"v":5.59e-05,"d":"5.59E-05"},{"v":0.00021,"d":"2.10E-04"},"Cobalamin biosynthesis CobW-like protein.","AT5G08560","WDR26",1419.9,0.32215,0.10484,3.0728,0.0021208,0.0077685,"transducin family protein / WD-40 repeat family protein."]
[{"$nulls":18},"AT5G17310","UGP2",3216.6,-0.35105,0.096858,-3.6244,{"v":2.9E-4,"d":"2.90E-04"},0.0011249,"full_name=UDP-glucose pyrophosphorylase 2. UDP-glucose pyrophosphorylase 2.","AT2G15695",null,654.81,0.44766,0.11124,4.0241,{"v":5.72e-05,"d":"5.72E-05"},{"v":0.000215,"d":"2.15E-04"},"peptide methionine sulfoxide reductase (Protein of unknown function DUF829, transmembrane 53).","AT5G22340",null,98.819,0.65719,0.21402,3.0707,2.1354E-3,0.0078127,"NF-kappa-B inhibitor-like protein."]
[{"$nulls":18},"AT1G62830","LDL1",72.971,-0.94094,0.25992,-3.6202,{"v":0.000294,"d":"2.94E-04"},0.0011418,"full_name=LSD1-like 1. LSD1-like 1. Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.","AT2G47890",null,390.89,0.73788,0.18368,4.0171,{"v":5.89e-05,"d":"5.89E-05"},{"v":0.000221,"d":"2.21E-04"},"B-box type zinc finger protein with CCT domain-containing protein.","AT1G62510",null,5454.6,0.21444,0.06992,3.0669,2.1627E-3,0.0079017,"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein."]
[{"$nulls":18},"AT4G26430","CSN6B",134.79,0.70123,0.19382,3.618,{"v":0.000297,"d":"2.97E-04"},1.15E-3,"full_name=COP9 signalosome subunit 6B. COP9 signalosome subunit 6B. one of two genes encoding subunit 6 of COP9 signalosome complex","AT2G38040","CAC3",333.6,-0.49305,0.12285,-4.0133,{"v":5.99e-05,"d":"5.99E-05"},{"v":2.24E-4,"d":"2.24E-04"},"full_name=acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit. acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit. encodes the carboxyltransferase alpha subunit of acetyl-CoA carboxylase, involved in de novo fatty acid biosynthesis","AT4G09685",null,5.9343,3.9036,1.2739,3.0644,0.0021811,0.0079599,"Natural antisense transcript overlaps with AT4G38180. Natural antisense transcript overlaps with AT4G38180"]
[{"$nulls":18},"AT3G02260","BIG",1601.3,0.42927,0.11873,3.6155,{"v":0.0003,"d":"3.00E-04"},0.0011606,"full_name=BIG. auxin transport protein (BIG). Calossin-like protein required for polar auxin transport","AT4G26455","WIP1",194.94,-0.62878,0.15671,-4.0124,{"v":6.01e-05,"d":"6.01E-05"},{"v":0.000225,"d":"2.25E-04"},"full_name=WPP domain interacting protein 1. WPP domain interacting protein 1. Encodes an outer nuclear membrane protein that anchors RanGAP1 to the nuclear envelope. It interacts with SUN proteins and is required for maintaining the elongated nuclear shape of epidermal cells.","AT2G40020",null,104.62,-0.66287,0.21637,-3.0636,2.1871E-3,0.007978,"Nucleolar histone methyltransferase-related protein."]
[{"$nulls":18},"AT2G34560","CCP1",680.64,-0.44962,0.1245,-3.6115,{"v":0.000304,"d":"3.04E-04"},1.1776E-3,"full_name=conserved in ciliated species and in the land plants 1. P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT4G25730","TRM7B",507.86,0.45062,0.11246,4.0069,{"v":6.15e-05,"d":"6.15E-05"},{"v":0.00023,"d":"2.30E-04"},"FtsJ-like methyltransferase family protein.","AT5G27410",null,546.18,0.3288,0.1074,3.0615,2.202E-3,0.008022,"D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein. D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). Note that the At5g27410.2 gene model (TAIR10) has been obsoleted due to the lack of experimental support."]
[{"$nulls":18},"AT1G74750",null,47.648,1.0785,0.29889,3.6084,{"v":0.000308,"d":"3.08E-04"},1.1902E-3,"Pentatricopeptide repeat (PPR) superfamily protein.","AT3G54390",null,22.932,-1.7835,0.44537,-4.0046,{"v":6.21e-05,"d":"6.21E-05"},{"v":2.32E-4,"d":"2.32E-04"},"sequence-specific DNA binding transcription factor.","AT3G54050","HCEF1",115.78,0.64873,0.21211,3.0585,0.0022248,0.0080966,"full_name=high cyclic electron flow 1. high cyclic electron flow 1. Encodes a chloroplastic fructose 1,6-bisphosphate phosphatase. also known as HCEF1 (High Cyclic Electron Flow 1). hcef1 mutants have constitutively elevated electron flow (CEFI) and plants with antisense suppression of this enzyme have higher levels of net leaf photosynthesis and increased sucrose biosynthesis."]
[{"$nulls":18},"AT5G09890",null,398.97,-0.46422,0.1288,-3.6041,{"v":0.000313,"d":"3.13E-04"},1.2082E-3,"Protein kinase family protein.","AT1G49950","TRB1",517.1,0.4188,0.10462,4.0031,{"v":6.25e-05,"d":"6.25E-05"},{"v":2.33E-4,"d":"2.33E-04"},"full_name=telomere repeat binding factor 1. telomere repeat binding factor 1. Encodes a telomeric DNA binding protein. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.","AT1G05710",null,122.53,0.65967,0.21594,3.0549,0.0022517,8.1823E-3,"basic helix-loop-helix (bHLH) DNA-binding superfamily protein."]
[{"$nulls":18},"AT1G48800",null,4.2654,-5.3574,1.487,-3.6028,{"v":0.000315,"d":"3.15E-04"},0.0012131,"Terpenoid cyclases/Protein prenyltransferases superfamily protein.","AT4G23860",null,352.35,0.4875,0.12185,4.0007,{"v":6.31e-05,"d":"6.31E-05"},{"v":0.000235,"d":"2.35E-04"},"PHD finger protein-like protein.","AT5G05780","RPN8A",382.2,0.38659,0.12663,3.0529,0.0022662,0.008227,"full_name=RP non-ATPase subunit 8A. RP non-ATPase subunit 8A. Encodes a putative 26S proteasome subunit RPN8a. The function of RPN8a and other 26S subunits may be required for specifying leaf adaxial identity."]
[{"$nulls":18},"AT1G75900",null,8.9469,3.4732,0.9645,3.6011,{"v":0.000317,"d":"3.17E-04"},0.0012195,"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT1G70440","SRO3",26.828,-3.2562,0.8145,-3.9978,{"v":6.39e-05,"d":"6.39E-05"},{"v":0.000238,"d":"2.38E-04"},"full_name=similar to RCD one 3. similar to RCD one 3. Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.","AT5G23940","PEL3",91.717,-0.67184,0.22042,-3.048,0.0023034,0.0083525,"full_name=PERMEABLE LEAVES3. HXXXD-type acyl-transferase family protein. Encodes PERMEABLE LEAVES3 (PEL3), a putative acyl-transferase. Mutation in this locus results in altered trichome phenotype (trcichomes become tangled during leaf expansion). Additional phenotype includes altered cuticle layer."]
[{"$nulls":18},"AT3G27090",null,391.35,-0.46907,0.13036,-3.5981,{"v":3.21E-4,"d":"3.21E-04"},0.0012318,"DCD (Development and Cell Death) domain protein.","AT4G39010","GH9B18",5.1137,-5.9634,1.4932,-3.9937,{"v":6.5e-05,"d":"6.50E-05"},{"v":2.42E-4,"d":"2.42E-04"},"full_name=glycosyl hydrolase 9B18. glycosyl hydrolase 9B18.","AT1G59890","SNL5",305.52,0.3908,0.12835,3.0449,0.0023278,0.0084275,"full_name=SIN3-like 5. SIN3-like 5."]
[{"$nulls":18},"AT1G16650",null,149.41,0.73379,0.20412,3.5948,{"v":0.000325,"d":"3.25E-04"},1.2462E-3,"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT3G56630","CYP94D2",303.77,0.53843,0.1349,3.9912,{"v":6.57e-05,"d":"6.57E-05"},{"v":0.000244,"d":"2.44E-04"},"full_name=cytochrome P450, family 94, subfamily D, polypeptide 2. cytochrome P450, family 94, subfamily D, polypeptide 2. member of CYP94D","AT3G61050","NTMC2T4",806.04,-0.27035,0.088874,-3.0419,0.002351,0.0085009,"Calcium-dependent lipid-binding (CaLB domain) family protein. Encodes a novel transcriptional regulator, a calcium-dependent lipid-binding protein containing a C2 domain, that binds specifically to the promoter of THAS1 (thalianol synthase 1). It can bind ceramide and is involved in drought and salt tolerance."]
[{"$nulls":18},"AT1G25500",null,61.92,-0.95084,0.26478,-3.591,{"v":0.000329,"d":"3.29E-04"},1.2626E-3,"Plasma-membrane choline transporter family protein.","AT1G17680",null,444.96,0.4763,0.11943,3.988,{"v":6.66e-05,"d":"6.66E-05"},{"v":0.000247,"d":"2.47E-04"},"tetratricopeptide repeat (TPR)-containing protein.","AT1G05520","ATSEC23B",249.66,0.43334,0.14253,3.0403,0.0023637,0.0085363,"Sec23/Sec24 protein transport family protein."]
[{"$nulls":18},"AT4G09970",null,22.2,-1.6705,0.46557,-3.5881,{"v":0.000333,"d":"3.33E-04"},0.0012754,"transmembrane protein.","AT3G51880","HMGB1",4251.8,0.39311,0.098662,3.9844,{"v":6.76e-05,"d":"6.76E-05"},{"v":0.00025,"d":"2.50E-04"},"full_name=high mobility group B1. high mobility group B1. Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. In interphase cells, HMGB1 is found throughout the nucleus, whereas in mitotic cells it is not chromatin-associated.","AT2G46610","RS31a",121.09,-0.59863,0.19703,-3.0382,0.0023796,0.0085839,"full_name=arginine/serine-rich splicing factor 31a. RNA-binding (RRM/RBD/RNP motifs) family protein. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926."]
[{"$nulls":18},"AT3G18290","BTS",247.51,0.56437,0.15737,3.5862,{"v":0.000336,"d":"3.36E-04"},1.2833E-3,"full_name=BRUTUS. zinc finger protein-like protein. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency.","AT3G29240",null,27.172,-1.6898,0.42505,-3.9755,{"v":7.02e-05,"d":"7.02E-05"},{"v":0.00026,"d":"2.60E-04"},"PPR containing protein (DUF179).","AT4G02450","P23-1",1915.5,-0.21697,0.071482,-3.0353,0.0024033,0.0086595,"HSP20-like chaperones superfamily protein."]
[{"$nulls":18},"AT1G65040","Hrd1B",424.04,-0.49647,0.13859,-3.5824,{"v":0.00034,"d":"3.40E-04"},1.3005E-3,"full_name=homolog of yeast Hrd1. RING/U-box superfamily protein. Encodes one of the Arabidopsis homologs of the yeast/human Hrd1 protein: AT3G16090 (Hrd1A), AT1G65040 (Hrd1B). Involved in ERAD (Endoplasmic reticulum-associated degradation).","AT5G13980",null,75.817,1.0273,0.25852,3.9736,{"v":7.08E-5,"d":"7.08E-05"},{"v":2.61E-4,"d":"2.61E-04"},"Glycosyl hydrolase family 38 protein.","AT4G18170","WRKY28",12.18,2.045,0.67438,3.0324,2.4261E-3,0.00873,"full_name=WRKY DNA-binding protein 28. WRKY DNA-binding protein 28. member of WRKY Transcription Factor; Group II-c. Involved in the activation of salicylic acid biosynthesis genes ICS1 and PBS3."]
[{"$nulls":18},"AT1G02560","CLPP5",572.61,0.41525,0.11607,3.5775,{"v":0.000347,"d":"3.47E-04"},0.0013229,"full_name=nuclear encoded CLP protease 5. nuclear encoded CLP protease 5. One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).","AT1G66650",null,65.798,1.0643,0.26807,3.9701,{"v":7.19e-05,"d":"7.19E-05"},{"v":0.000265,"d":"2.65E-04"},"Protein with RING/U-box and TRAF-like domain.","AT1G79810","TED3",369.72,-0.3917,0.12926,-3.0303,0.0024434,0.0087803,"full_name=REVERSAL OF THE DET PHENOTYPE 3. Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein. Dominant suppressor of det1 phenotypes. Encodes a peroxisomal protein essential for Arabidopsis growth. Inserted directly from the cytosol into peroxisomes."]
[{"$nulls":18},"AT4G27900",null,382.46,-0.52153,0.14578,-3.5774,{"v":0.000347,"d":"3.47E-04"},1.3231E-3,"CCT motif family protein.","AT2G05632",null,52.928,-1.1918,0.30025,-3.9693,{"v":7.21e-05,"d":"7.21E-05"},{"v":0.000266,"d":"2.66E-04"},"hypothetical protein.","AT3G07560","PEX13",2311.8,-0.22285,0.073552,-3.0298,0.0024468,0.0087904,"full_name=peroxin 13. peroxin 13. Encodes peroxin 13 (PEX13) involved in protein transport into peroxisomes, for example, peroxisomal import of nitric oxide synthase."]
[{"$nulls":18},"AT5G24260",null,120.1,-0.72505,0.20286,-3.5742,{"v":0.000351,"d":"3.51E-04"},0.0013383,"prolyl oligopeptidase family protein.","AT5G13160","PBS1",130.41,-0.78328,0.19744,-3.9672,{"v":7.27e-05,"d":"7.27E-05"},{"v":0.000268,"d":"2.68E-04"},"full_name=avrPphB susceptible 1. Protein kinase superfamily protein. Mutant is defective in perception of Pseudomonas syringae avirulence gene avrPphB. Encodes a putative serine-threonine kinase.","AT3G26350",null,31.783,1.2127,0.40094,3.0245,0.0024902,0.0089363,"proline-rich receptor-like kinase."]
[{"$nulls":18},"AT5G23100",null,12.31,-2.4872,0.69622,-3.5725,{"v":0.000354,"d":"3.54E-04"},0.0013455,"MIZU-KUSSEI-like protein (Protein of unknown function, DUF617).","AT1G76560","CP12-3",84.02,0.96622,0.24376,3.9638,{"v":7.38e-05,"d":"7.38E-05"},{"v":0.000271,"d":"2.71E-04"},"full_name=CP12 domain-containing protein 3. CP12 domain-containing protein 3.","AT1G70730","PGM2",793.29,-0.27136,0.089772,-3.0227,2.5052E-3,0.00898,"full_name=phosphoglucomutase 2. Phosphoglucomutase/phosphomannomutase family protein. Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development."]
[{"$nulls":18},"AT1G07610","MT1C",174.17,0.66604,0.18666,3.5682,{"v":3.59E-4,"d":"3.59E-04"},1.3656E-3,"full_name=metallothionein 1C. metallothionein 1C. one of the five metallothioneins (MTs) genes identified in Arabidopsis. MTs are cysteine-rich proteins required for heavy metal tolerance.","AT2G39720","RHC2A",221.28,-0.6284,0.1587,-3.9596,{"v":7.51e-05,"d":"7.51E-05"},{"v":0.000276,"d":"2.76E-04"},"full_name=RING-H2 finger C2A. RING-H2 finger C2A. Encodes a putative RING-H2 finger protein RHC2a.","AT1G12300","RFL2",30.482,-1.224,0.40541,-3.0192,0.0025348,0.009074,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
[{"$nulls":18},"AT3G08850","RAPTOR1",966.74,0.42113,0.11809,3.5663,{"v":0.000362,"d":"3.62E-04"},0.0013742,"Regulatory-associated protein of TOR 1. Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.","AT2G31090","TAX1",249.06,-0.63111,0.15952,-3.9563,{"v":7.61e-05,"d":"7.61E-05"},{"v":0.000279,"d":"2.79E-04"},"transmembrane protein.","AT2G45920",null,126.17,0.59894,0.19849,3.0175,0.0025484,0.0091116,"U-box domain-containing protein."]
[{"$nulls":18},"AT4G21710","NRPB2",851.01,0.44595,0.12512,3.5642,{"v":0.000365,"d":"3.65E-04"},0.0013837,"DNA-directed RNA polymerase family protein. Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit.","AT4G08590","ORTHL",141.88,-0.90644,0.22926,-3.9537,{"v":7.69e-05,"d":"7.69E-05"},{"v":0.000282,"d":"2.82E-04"},"full_name=ORTHRUS-like. ORTHRUS-like protein.","AT1G77770",null,168.11,0.50917,0.16884,3.0157,2.5642E-3,0.0091566,"forkhead box protein, putative (DUF1644)."]
[{"$nulls":18},"AT4G22580",null,33.718,-1.2937,0.36326,-3.5615,{"v":0.000369,"d":"3.69E-04"},1.3959E-3,"Exostosin family protein.","AT3G62770","AtATG18a",554.62,0.42456,0.10748,3.9501,{"v":7.81e-05,"d":"7.81E-05"},{"v":0.000286,"d":"2.86E-04"},"full_name=autophagy 18a. Transducin/WD40 repeat-like superfamily protein. Required for autophagosome formation during nutrient deprivation and senescence.","AT5G26830",null,420.33,0.33469,0.11112,3.0121,0.0025942,0.0092511,"Threonyl-tRNA synthetase. Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion."]
[{"$nulls":18},"AT3G51940",null,124.44,0.69981,0.19667,3.5583,{"v":0.000373,"d":"3.73E-04"},0.001411,"oxidoreductase/transition metal ion-binding protein.","AT5G67190","DEAR2",116.76,0.90955,0.23048,3.9463,{"v":7.94e-05,"d":"7.94E-05"},{"v":2.9E-4,"d":"2.90E-04"},"full_name=DREB and EAR motif protein 2. DREB and EAR motif protein 2. encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.","AT4G16840",null,13.609,2.0889,0.69454,3.0076,0.0026331,0.0093793,"transmembrane protein."]
[{"$nulls":18},"AT5G45670",null,4.5934,-5.4877,1.5434,-3.5556,{"v":3.77E-4,"d":"3.77E-04"},0.001424,"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT4G19500",null,562.06,-0.56737,0.14396,-3.9412,{"v":8.11e-05,"d":"8.11E-05"},{"v":0.000296,"d":"2.96E-04"},"nucleoside-triphosphatase/transmembrane receptor/nucleotide binding/ATP binding protein.","AT5G48300","ADG1",248.08,-0.42126,0.14027,-3.0032,0.0026717,0.009504,"full_name=ADP glucose pyrophosphorylase 1. ADP glucose pyrophosphorylase 1. Encodes the small subunit of ADP-glucose pyrophosphorylase. The small subunit is the catalytic isoform responsible for ADP-glucose pyrophosphorylase activity. The presence of the small subunit is required for large subunit stability. Two isoforms of the small subunit (ApS1 and ApS2) have been described. ApS1 is the major small subunit isoform present in all plant tissues tested."]
[{"$nulls":18},"AT5G23110",null,599.32,0.51524,0.14493,3.555,{"v":0.000378,"d":"3.78E-04"},0.0014254,"Zinc finger, C3HC4 type (RING finger) family protein.","AT3G02150","PTF1",55.411,-1.5766,0.40038,-3.9376,{"v":8.23e-05,"d":"8.23E-05"},{"v":0.0003,"d":"3.00E-04"},"full_name=plastid transcription factor 1. plastid transcription factor 1. a chloroplast trans-acting factor of the psbD light-responsive promoter.TCP gene involved in heterochronic control of leaf differentiation.","AT4G35910","CTU2",127.49,0.58077,0.19353,3.0009,0.002692,0.0095657,"Adenine nucleotide alpha hydrolases-like superfamily protein. Encodes a cytoplasmic thiouridylase that is essential for tRNA thiolation. Its activity appears to be important in root development."]
[{"$nulls":18},"AT3G02860","ARS1",140.89,0.74349,0.2093,3.5523,{"v":0.000382,"d":"3.82E-04"},1.4385000000000001E-3,"zinc ion binding protein.","AT4G35790","PLDDELTA",1332.5,-0.38423,0.097632,-3.9355,{"v":8.3e-05,"d":"8.30E-05"},{"v":0.000302,"d":"3.02E-04"},"full_name=phospholipase D delta. phospholipase D delta. Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death.","AT5G53800",null,598.86,-0.39361,0.13123,-2.9993,0.0027061,0.0096049,"nucleic acid-binding protein."]
[{"$nulls":18},"AT3G03040",null,66.575,-0.90335,0.25442,-3.5506,{"v":0.000384,"d":"3.84E-04"},1.4468E-3,"F-box/RNI-like superfamily protein.","AT4G35290","GLUR2",4.7133,-5.8485,1.4865,-3.9343,{"v":8.34e-05,"d":"8.34E-05"},{"v":0.000304,"d":"3.04E-04"},"full_name=glutamate receptor 2. glutamate receptor 2. Encodes a putative glutamate receptor like-protein, member of Putative ligand-gated ion channel subunit family","AT2G40660",null,246.53,-0.44591,0.1487,-2.9988,2.7101E-3,0.0096108,"Nucleic acid-binding, OB-fold-like protein."]
[{"$nulls":18},"AT4G19810","ChiC",145.94,-0.65373,0.18431,-3.547,{"v":0.00039,"d":"3.90E-04"},0.0014641,"full_name=class V chitinase. Glycosyl hydrolase family protein with chitinase insertion domain-containing protein. ChiC encodes a Class V chitinase that is a part of glycoside hydrolase family 18 based on CAZy groupings. It appears to primarily act as an exochitinase in vitro where it predominantly cleaves a chitobiose (GlcNAc)2 residue from the non-reducing end of a chitin oligosaccharide. However, it shows some minor endochitinase activity in vitro, as well. A putative 24 amino-acid signal peptide may direct this protein to the secretory system and it has been detected in cell wall apoplastic fluid. RT-PCR experiments demonstrate that ChiC transcript levels are increased in response to abscisisc acid, jasmonic acid, and NaCl stress. Microarray results also suggest that transcript levels rise in response to osmotic stress, two fungal pathogens, a bacterial pathogen, and the elicitor flagellin.","AT5G57440","GS1",12.463,2.6996,0.68693,3.9299,{"v":8.5e-05,"d":"8.50E-05"},{"v":0.000309,"d":"3.09E-04"},"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein. a member of haloacid dehalogenase-like hydrolase family","AT3G11710","ATKRS-1",445.43,0.33115,0.11056,2.9951,2.7434E-3,0.0097113,"full_name=lysyl-tRNA synthetase 1. lysyl-tRNA synthetase 1."]
[{"$nulls":18},"AT1G18300","NUDT4",63.603,1.351,0.38111,3.5451,{"v":0.000393,"d":"3.93E-04"},0.001473,"full_name=nudix hydrolase homolog 4. nudix hydrolase homolog 4.","AT4G37430","CYP91A2",208.33,-0.81054,0.20641,-3.9269,{"v":8.61e-05,"d":"8.61E-05"},{"v":0.000312,"d":"3.12E-04"},"full_name=cytochrome P450, family 91, subfamily A, polypeptide 2. cytochrome P450, family 91, subfamily A, polypeptide 2. Encodes a member of the CYP81F cytochrome P450 monooxygenase subfamily.","AT3G17920",null,19.131,-1.5256,0.50946,-2.9944,2.7496E-3,0.0097225,"Outer arm dynein light chain 1 protein."]
[{"$nulls":18},"AT4G28460","PREPIP1",8.4898,2.8558,0.80558,3.545,{"v":0.000393,"d":"3.93E-04"},0.001473,"transmembrane protein.","AT5G13360",null,532.73,0.51606,0.13142,3.9268,{"v":8.61e-05,"d":"8.61E-05"},{"v":0.000312,"d":"3.12E-04"},"Auxin-responsive GH3 family protein.","AT5G45430",null,2971.9,-0.19027,0.06355,-2.9941,2.7526E-3,0.0097309,"Protein kinase superfamily protein."]
[{"$nulls":18},"AT5G04250",null,128.84,0.83747,0.23637,3.5431,{"v":0.000395,"d":"3.95E-04"},0.0014821,"Cysteine proteinases superfamily protein.","AT4G34640","SQS1",10.004,-4.4455,1.1324,-3.9257,{"v":8.65e-05,"d":"8.65E-05"},{"v":0.000313,"d":"3.13E-04"},"full_name=squalene synthase 1. squalene synthase 1. Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway.","AT5G09595",null,12.819,2.0194,0.67538,2.9901,0.002789,0.0098488,"Natural antisense transcript overlaps with AT5G66280. Natural antisense transcript overlaps with AT5G66280"]
[{"$nulls":18},"AT5G58760","DDB2",288.59,0.51998,0.14692,3.5392,{"v":0.000401,"d":"4.01E-04"},1.5022E-3,"full_name=damaged DNA binding 2. damaged DNA binding 2. Encodes a DDB1a interacting protein DDB2 required for UV-B tolerance and genomic integrity.","AT1G30220","INT2",22.062,1.8502,0.47169,3.9225,{"v":8.76e-05,"d":"8.76E-05"},{"v":0.000317,"d":"3.17E-04"},"full_name=inositol transporter 2. inositol transporter 2. Inositol transporter presenting conserved extracellular loop domains homologs of plexins/semaphorin/integrin (PSI) domains from animal type I receptors.","AT5G45510",null,114.19,-0.62906,0.2106,-2.9871,0.0028167,0.0099334,"Leucine-rich repeat (LRR) family protein."]
[{"$nulls":18},"AT1G07119",null,29.659,1.3377,0.37827,3.5364,{"v":4.06E-4,"d":"4.06E-04"},0.0015159,"Natural antisense transcript overlaps with AT1G07120. Potential natural antisense gene, locus overlaps with AT1G07120 Natural antisense transcript overlaps with AT1G07120","AT1G15230",null,1140.2,0.34659,0.08843,3.9194,{"v":8.88e-05,"d":"8.88E-05"},{"v":3.21E-4,"d":"3.21E-04"},"hypothetical protein."]
[{"$nulls":18},"AT4G34370","ARI1",326.74,-0.49505,0.14013,-3.5328,{"v":0.000411,"d":"4.11E-04"},1.5355E-3,"full_name=ARIADNE 1. RING/U-box superfamily protein.","AT5G58250","EMB3143",149.36,0.92312,0.23572,3.9161,{"v":9e-05,"d":"9.00E-05"},{"v":0.000325,"d":"3.25E-04"},"full_name=EMBRYO DEFECTIVE 3143. YCF54."]
[{"$nulls":18},"AT5G27610","ALY1",42.427,1.1883,0.33663,3.5299,{"v":0.000416,"d":"4.16E-04"},1.5504E-3,"full_name=ALWAYS EARLY 1. protein ALWAYS EARLY 1.","AT4G00030","FBN9",176.18,0.82901,0.21209,3.9088,{"v":9.28e-05,"d":"9.28E-05"},{"v":0.000334,"d":"3.34E-04"},"Plastid-lipid associated protein PAP / fibrillin family protein."]
[{"$nulls":18},"AT2G04740",null,188.34,0.64323,0.18231,3.5282,{"v":0.000418,"d":"4.18E-04"},0.0015588,"ankyrin repeat family protein.","AT2G30050",null,89.154,-0.85208,0.21831,-3.9032,{"v":9.49e-05,"d":"9.49E-05"},{"v":0.000342,"d":"3.42E-04"},"transducin family protein / WD-40 repeat family protein."]
[{"$nulls":18},"AT3G23605",null,87.285,0.82031,0.23265,3.5259,{"v":0.000422,"d":"4.22E-04"},0.0015698,"Ubiquitin-like superfamily protein.","AT3G42850","ARA2",42.238,1.4372,0.36864,3.8986,{"v":9.67e-05,"d":"9.67E-05"},{"v":3.48E-4,"d":"3.48E-04"},"Mevalonate/galactokinase family protein."]
[{"$nulls":18},"AT2G04865","MAIL2",250.67,0.54753,0.15536,3.5243,{"v":0.000425,"d":"4.25E-04"},1.5776E-3,"Aminotransferase-like, plant mobile domain family protein.","AT1G11650","RBP45B",2210.5,-0.26891,0.068995,-3.8976,{"v":9.72e-05,"d":"9.72E-05"},{"v":0.000349,"d":"3.49E-04"},"RNA-binding (RRM/RBD/RNP motifs) family protein. Encodes an RNA binding protein with three RNA recognition motifs."]
[{"$nulls":18},"AT5G65020","ANNAT2",29.948,-1.6088,0.45699,-3.5205,{"v":0.000431,"d":"4.31E-04"},0.0015992,"full_name=annexin 2. annexin 2. Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane. They may be involved in the Golgi-mediated secretion of polysaccharides.","AT3G43690",null,152.13,0.84175,0.21619,3.8936,{"v":9.88e-05,"d":"9.88E-05"},{"v":0.000354,"d":"3.54E-04"},"transposable_element_gene."]
[{"$nulls":18},"AT2G04900",null,364.76,0.46351,0.13167,3.5201,{"v":0.000431,"d":"4.31E-04"},0.0016004,"hypothetical protein.","AT2G28320",null,40.348,-1.4063,0.36138,-3.8915,{"v":9.96e-05,"d":"9.96E-05"},{"v":3.57E-4,"d":"3.57E-04"},"Pleckstrin homology (PH) and lipid-binding START domains-containing protein."]
[{"$nulls":18},"AT3G14890","ZDP",152.86,0.63595,0.18094,3.5147,{"v":0.00044,"d":"4.40E-04"},1.6301E-3,"phosphoesterase.","AT3G19020","LRX8",26.267,3.0271,0.77889,3.8864,{"v":1.02E-4,"d":"1.02E-04"},{"v":0.000364,"d":"3.64E-04"},"Leucine-rich repeat (LRR) family protein."]
[{"$nulls":18},"AT5G25490",null,4.0826,-5.3034,1.5102,-3.5117,{"v":0.000445,"d":"4.45E-04"},0.0016459,"Ran BP2/NZF zinc finger-like superfamily protein.","AT3G07420","NS2",23.251,1.8295,0.47095,3.8846,{"v":1.02E-4,"d":"1.02E-04"},{"v":0.000366,"d":"3.66E-04"},"full_name=asparaginyl-tRNA synthetase 2. asparaginyl-tRNA synthetase 2. Encodes an asparaginyl-tRNA synthetase."]
[{"$nulls":18},"AT3G57070",null,62.777,-0.94459,0.26898,-3.5117,{"v":0.000445,"d":"4.45E-04"},0.0016459,"Glutaredoxin family protein.","AT3G55605",null,104.47,0.79379,0.20436,3.8843,{"v":1.03E-4,"d":"1.03E-04"},{"v":0.000367,"d":"3.67E-04"},"Mitochondrial glycoprotein family protein."]
[{"$nulls":18},"AT1G16410","CYP79F1",9.2335,-3.6139,1.0297,-3.5096,{"v":0.000449,"d":"4.49E-04"},0.0016572,"full_name=cytochrome p450 79f1. cytochrome p450 79f1. member of CYP79F","AT3G56730",null,4.5444,-5.7949,1.4947,-3.8771,{"v":1.06E-4,"d":"1.06E-04"},{"v":3.77E-4,"d":"3.77E-04"},"Putative endonuclease or glycosyl hydrolase."]
[{"$nulls":18},"AT1G28590",null,4.2657,-5.3648,1.5294,-3.5077,{"v":0.000452,"d":"4.52E-04"},1.6669E-3,"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT2G38920",null,32.843,-1.4321,0.37004,-3.8702,{"v":0.000109,"d":"1.09E-04"},{"v":3.88E-4,"d":"3.88E-04"},"SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-like protein."]
[{"$nulls":18},"AT5G40490","HLP1",182.81,0.68871,0.19639,3.5069,{"v":0.000453,"d":"4.53E-04"},1.67E-3,"RNA-binding (RRM/RBD/RNP motifs) family protein.","AT5G35840","PHYC",150.36,0.74105,0.19171,3.8656,{"v":1.11E-4,"d":"1.11E-04"},{"v":0.000395,"d":"3.95E-04"},"full_name=phytochrome C. phytochrome C. Encodes the apoprotein of phytochrome;one of a family of photoreceptors that modulate plant growth and development."]
[{"$nulls":18},"AT1G25400",null,7.4348,3.1833,0.90836,3.5044,{"v":0.000458,"d":"4.58E-04"},1.6837E-3,"transmembrane protein.","AT4G26690","SHV3",23.747,-1.7323,0.44842,-3.8632,{"v":1.12E-4,"d":"1.12E-04"},{"v":0.000398,"d":"3.98E-04"},"full_name=SHAVEN 3. PLC-like phosphodiesterase family protein. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development."]
[{"$nulls":18},"AT3G28730","HMG",603.65,0.49394,0.14101,3.5028,{"v":0.00046,"d":"4.60E-04"},0.0016919,"full_name=high mobility group. high mobility group. encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC.","AT1G14960",null,75.614,1.0368,0.26866,3.8592,{"v":0.000114,"d":"1.14E-04"},{"v":0.000404,"d":"4.04E-04"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein."]
[{"$nulls":18},"AT1G70000","MYBD",33.257,-1.3464,0.38448,-3.502,{"v":0.000462,"d":"4.62E-04"},0.001695,"myb-like transcription factor family protein.","AT1G80170",null,44.362,1.2467,0.3234,3.8551,{"v":1.16E-4,"d":"1.16E-04"},{"v":0.000411,"d":"4.11E-04"},"Pectin lyase-like superfamily protein."]
[{"$nulls":18},"AT3G02940","MYB107",157.83,-0.76134,0.21789,-3.4941,{"v":0.000476,"d":"4.76E-04"},0.0017443,"full_name=myb domain protein 107. myb domain protein 107. Encodes a putative transcription factor (MYB107).","AT4G17620","DXO1",357.73,0.45821,0.11892,3.853,{"v":1.17E-4,"d":"1.17E-04"},{"v":0.000414,"d":"4.14E-04"},"glycine-rich protein."]
[{"$nulls":18},"AT5G10390","HTR13",18.479,1.6906,0.48416,3.4918,{"v":0.00048,"d":"4.80E-04"},1.7568E-3,"Histone superfamily protein.","AT2G45450","ZPR1",9.4404,-3.5233,0.9151,-3.8502,{"v":1.18E-4,"d":"1.18E-04"},{"v":0.000418,"d":"4.18E-04"},"full_name=LITTLE ZIPPER 1. binding protein. ZPR1, a small leucine zipper-containing protein that interacts with REV HD-ZIPIII and is involved in the establishment of leaf polarity."]
[{"$nulls":18},"AT3G27210",null,98.985,-0.80456,0.23058,-3.4893,{"v":4.84E-4,"d":"4.84E-04"},0.0017711,"hypothetical protein.","AT2G30350","HIGLE",249.55,0.59224,0.15392,3.8476,{"v":0.000119,"d":"1.19E-04"},{"v":0.000422,"d":"4.22E-04"},"Excinuclease ABC, C subunit, N-terminal."]
[{"$nulls":18},"AT4G34480",null,942.55,-0.40424,0.11594,-3.4865,{"v":0.000489,"d":"4.89E-04"},0.0017873,"O-Glycosyl hydrolases family 17 protein.","AT4G21660",null,1697.6,0.47136,0.12264,3.8435,{"v":1.21E-4,"d":"1.21E-04"},{"v":4.28E-4,"d":"4.28E-04"},"proline-rich spliceosome-associated (PSP) family protein."]
[{"$nulls":18},"AT5G19300",null,68.682,0.96359,0.27652,3.4847,{"v":0.000493,"d":"4.93E-04"},0.0017975,"methyltransferase C9orf114 protein.","AT5G50600","HSD1",61383,0.36993,0.096285,3.842,{"v":1.22E-4,"d":"1.22E-04"},{"v":0.00043,"d":"4.30E-04"},"full_name=hydroxysteroid dehydrogenase 1. hydroxysteroid dehydrogenase 1. Encodes a hydroxysteroid dehydrogenase shown to act as a NADP+-dependent 11&beta;-,17&beta;-hydroxysteroid dehydrogenase/17&beta;-ketosteroid reductase called HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination. To date, the endogenous substrates of this enzyme are not known."]
[{"$nulls":18},"AT5G40760","G6PD6",535.67,-0.42544,0.12223,-3.4808,{"v":0.0005,"d":"5.00E-04"},0.001822,"full_name=glucose-6-phosphate dehydrogenase 6. glucose-6-phosphate dehydrogenase 6. Encodes a cytosolic glucose-6-phosphate dehydrogenase that is insensitive to reduction by DTT and whose mRNA is expressed ubiquitously.","AT3G51090",null,123.35,-0.74224,0.19334,-3.839,{"v":0.000124,"d":"1.24E-04"},{"v":4.35E-4,"d":"4.35E-04"},"coiled-coil 90B-like protein (DUF1640)."]
[{"$nulls":18},"AT3G56480","SCAB3",31.673,-1.355,0.38932,-3.4805,{"v":0.000501,"d":"5.01E-04"},1.8239E-3,"myosin heavy chain-like protein.","AT4G26095",null,27.809,1.8004,0.46909,3.8381,{"v":0.000124,"d":"1.24E-04"},{"v":4.37E-4,"d":"4.37E-04"},"Natural antisense transcript overlaps with AT4G26090. Potential natural antisense gene, locus overlaps with AT4G26090 Natural antisense transcript overlaps with AT4G26090"]
[{"$nulls":18},"AT2G38860","YLS5",143.51,0.64102,0.18438,3.4765,{"v":0.000508,"d":"5.08E-04"},1.8487E-3,"Class I glutamine amidotransferase-like superfamily protein. Encodes protease I (pfpI)-like protein YLS5.","AT4G39240",null,196.58,-0.61268,0.15971,-3.8363,{"v":1.25E-4,"d":"1.25E-04"},{"v":0.00044,"d":"4.40E-04"},"Galactose oxidase/kelch repeat superfamily protein."]
[{"$nulls":18},"AT3G04020",null,132.01,0.6818,0.19643,3.4709,{"v":0.000519,"d":"5.19E-04"},0.0018846,"hypothetical protein.","AT4G31180","IBI1",653.39,0.36729,0.095896,3.8301,{"v":0.000128,"d":"1.28E-04"},{"v":0.00045,"d":"4.50E-04"},"Class II aminoacyl-tRNA and biotin synthetases superfamily protein."]
[{"$nulls":18},"AT2G44610","RAB6A",145.81,-0.84386,0.24322,-3.4695,{"v":0.000521,"d":"5.21E-04"},1.8928E-3,"Ras-related small GTP-binding family protein. Encodes a GTP-binding protein with similarity to yeast YPT6 . RAB6 can complement the yeast YTP mutant.","AT2G47050",null,47.319,2.5387,0.6631,3.8285,{"v":0.000129,"d":"1.29E-04"},{"v":0.000452,"d":"4.52E-04"},"Plant invertase/pectin methylesterase inhibitor superfamily protein."]
[{"$nulls":18},"AT2G39400","MAGL6",56.148,-1.2139,0.34996,-3.4686,{"v":0.000523,"d":"5.23E-04"},0.0018971,"alpha/beta-Hydrolases superfamily protein.","AT5G49400",null,226.59,0.55943,0.14626,3.8249,{"v":0.000131,"d":"1.31E-04"},{"v":0.000459,"d":"4.59E-04"},"zinc knuckle (CCHC-type) family protein."]
[{"$nulls":18},"AT2G28520","VHA-A1",222.31,-0.536,0.1547,-3.4648,{"v":5.31E-4,"d":"5.31E-04"},1.9222E-3,"full_name=vacuolar proton ATPase A1. vacuolar proton ATPase A1. Vacuolar proton ATPase subunit VHA-a isoform 1. Localized in the trans-Golgi network.","AT1G67250","UMP1A",127.15,-0.71385,0.18688,-3.8199,{"v":1.34E-4,"d":"1.34E-04"},{"v":0.000468,"d":"4.68E-04"},"Proteasome maturation factor UMP1."]
[{"$nulls":18},"AT1G63820",null,251.6,0.56972,0.16454,3.4624,{"v":0.000535,"d":"5.35E-04"},0.0019369,"CCT motif family protein.","AT5G12180","CPK17",7.0523,6.113,1.6022,3.8154,{"v":1.36E-4,"d":"1.36E-04"},{"v":0.000476,"d":"4.76E-04"},"full_name=calcium-dependent protein kinase 17. calcium-dependent protein kinase 17. member of Calcium Dependent Protein Kinase"]
[{"$nulls":18},"AT2G33630",null,13.524,-2.5868,0.74746,-3.4608,{"v":0.000539,"d":"5.39E-04"},0.0019466,"NAD(P)-binding Rossmann-fold superfamily protein.","AT2G48100",null,443.54,0.43586,0.11434,3.8119,{"v":0.000138,"d":"1.38E-04"},{"v":0.000482,"d":"4.82E-04"},"Exonuclease family protein."]
[{"$nulls":18},"AT5G65380",null,1263.4,-0.33063,0.095569,-3.4596,{"v":0.000541,"d":"5.41E-04"},0.0019537,"MATE efflux family protein.","AT2G26430","RCY1",358.03,0.4719,0.12384,3.8106,{"v":0.000139,"d":"1.39E-04"},{"v":4.84E-4,"d":"4.84E-04"},"full_name=arginine-rich cyclin 1. arginine-rich cyclin 1. Encodes an ania-6a type arginine-rich cyclin which confers tolerance to LiCl and NaCl when expressed in yeast."]
[{"$nulls":18},"AT1G01210",null,144.46,0.6459,0.18688,3.4562,{"v":0.000548,"d":"5.48E-04"},0.001975,"DNA-directed RNA polymerase, subunit M, archaeal.","AT3G05905",null,26.381,1.6825,0.44276,3.8002,{"v":1.45E-4,"d":"1.45E-04"},{"v":5.04E-4,"d":"5.04E-04"},"Natural antisense transcript overlaps with AT3G05900. Potential natural antisense gene, locus overlaps with AT3G05900 Natural antisense transcript overlaps with AT3G05900"]
[{"$nulls":18},"AT1G26260","CIB5",105.48,-0.79849,0.23129,-3.4523,{"v":0.000556,"d":"5.56E-04"},0.0020012,"full_name=cryptochrome-interacting basic-helix-loop-helix 5. cryptochrome-interacting basic-helix-loop-helix 5. Encodes CIB5 (cryptochrome-interacting basic-helix-loop-helix). Related to CIB1 (AT4G34530). CIB5 interacts with CRY2 and forms heterodimer with CIB1 in vitro. Regulates flowering time redundantly with CIB1.","AT4G10050","PMES",56.89,1.183,0.31179,3.7943,{"v":0.000148,"d":"1.48E-04"},{"v":0.000515,"d":"5.15E-04"},"esterase/lipase/thioesterase family protein."]
[{"$nulls":18},"AT5G01410","RSR4",704.97,0.51333,0.14872,3.4516,{"v":0.000557,"d":"5.57E-04"},2.0046E-3,"full_name=REDUCED SUGAR RESPONSE 4. Aldolase-type TIM barrel family protein. Encodes a protein predicted to function in tandem with PDX2 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis.","AT2G36960","TKI1",281.47,-0.54038,0.14257,-3.7901,{"v":0.000151,"d":"1.51E-04"},{"v":0.000523,"d":"5.23E-04"},"full_name=TSL-kinase interacting protein 1. TSL-kinase interacting protein 1. Arabidopsis thaliana myb/SANT domain protein"]
[{"$nulls":18},"AT5G42510",null,22.413,-1.7183,0.49815,-3.4493,{"v":5.62E-4,"d":"5.62E-04"},2.0195E-3,"Disease resistance-responsive (dirigent-like protein) family protein.","AT5G42540","XRN2",421.61,0.43724,0.11539,3.7893,{"v":0.000151,"d":"1.51E-04"},{"v":0.000525,"d":"5.25E-04"},"full_name=exoribonuclease 2. exoribonuclease 2. Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN2 acts as a suppressor of posttranscriptional gene silencing."]
[{"$nulls":18},"AT3G47290","PLC8",33.953,-1.2761,0.36997,-3.4492,{"v":5.62E-4,"d":"5.62E-04"},2.0195E-3,"full_name=phosphatidylinositol-speciwc phospholipase C8. phosphatidylinositol-speciwc phospholipase C8.","AT1G63680","MURE",207.16,0.56165,0.14823,3.7891,{"v":0.000151,"d":"1.51E-04"},{"v":0.000525,"d":"5.25E-04"},"ALBINO OR PALE-GREEN 13. Encodes AtMurE, a homolog of the bacterial MurE that catalyze the ATP-dependent formation of UDP-N-acetylmuramic acid-tripeptide in bacterial peptidoglycan biosynthesis. Localized to plastids. AtMurE is involved in chloroplast biogenesis."]
[{"$nulls":18},"AT1G23935",null,178.97,0.67348,0.19558,3.4436,{"v":0.000574,"d":"5.74E-04"},0.0020589,"apoptosis inhibitory protein.","AT5G18490",null,23.137,-1.7924,0.47356,-3.7849,{"v":1.54E-4,"d":"1.54E-04"},{"v":0.000533,"d":"5.33E-04"},"vacuolar sorting-associated protein (DUF946)."]
[{"$nulls":18},"AT3G07690",null,32.816,-1.268,0.36846,-3.4412,{"v":0.000579,"d":"5.79E-04"},0.0020747,"6-phosphogluconate dehydrogenase family protein.","AT5G39720","AIG2L",6882.8,-0.48237,0.12758,-3.7808,{"v":1.56E-4,"d":"1.56E-04"},{"v":0.000541,"d":"5.41E-04"},"full_name=avirulence induced gene 2 like protein. avirulence induced protein 2 like protein."]
[{"$nulls":18},"AT5G44560","VPS2.2",34.835,-1.5463,0.44964,-3.4389,{"v":0.000584,"d":"5.84E-04"},0.0020903,"SNF7 family protein.","AT5G20480","EFR",57.54,1.0894,0.28859,3.7749,{"v":0.00016,"d":"1.60E-04"},{"v":0.000554,"d":"5.54E-04"},"full_name=EF-TU receptor. EF-TU receptor. Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu."]
[{"$nulls":18},"AT1G60860","AGD2",105.48,-0.73547,0.21398,-3.437,{"v":0.000588,"d":"5.88E-04"},0.0021028,"full_name=ARF-GAP domain 2. ARF-GAP domain 2. A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD2 belongs to the class 1, together with AGD1, AGD3, and AGD4.","AT5G10540","TOP2",667.62,0.37863,0.1004,3.7711,{"v":1.63E-4,"d":"1.63E-04"},{"v":5.62E-4,"d":"5.62E-04"},"Zincin-like metalloproteases family protein."]
[{"$nulls":18},"AT5G63570","GSA1",190.56,0.56787,0.16533,3.4347,{"v":0.000593,"d":"5.93E-04"},0.0021172,"full_name=glutamate-1-semialdehyde-2,1-aminomutase. glutamate-1-semialdehyde-2,1-aminomutase. Encodes a protein with homology to glutamate-1-semialdehyde 2,1-aminomutase catalyzing the conversion of glutamate-1-semialdehyde (GSA) into 5-amino levulinate. The expression of this gene was demonstrated to be light-induced.","AT4G32880","HB-8",9.3523,-3.5093,0.9316,-3.767,{"v":1.65E-4,"d":"1.65E-04"},{"v":0.00057,"d":"5.70E-04"},"full_name=homeobox gene 8. homeobox-leucine zipper protein ATHB-8. member of homeodomain-leucine zipper family, acting as a differentiation-promoting transcription factor of the vascular meristems."]
[{"$nulls":18},"AT3G60030","SPL12",558.11,-0.43343,0.12622,-3.4339,{"v":0.000595,"d":"5.95E-04"},0.0021226,"full_name=squamosa promoter-binding protein-like 12. squamosa promoter-binding protein-like 12.","AT4G13670","PTAC5",17.609,2.1321,0.56625,3.7652,{"v":1.66E-4,"d":"1.66E-04"},{"v":0.000574,"d":"5.74E-04"},"full_name=plastid transcriptionally active 5. plastid transcriptionally active 5."]
[{"$nulls":18},"AT5G23860","TUB8",14.568,-2.0527,0.59819,-3.4315,{"v":0.0006,"d":"6.00E-04"},2.1381E-3,"full_name=tubulin beta 8. tubulin beta 8. beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers.","AT5G22650","HD2B",1344.6,0.49211,0.13075,3.7637,{"v":0.000167,"d":"1.67E-04"},{"v":0.000576,"d":"5.76E-04"},"full_name=histone deacetylase 2B. histone deacetylase 2B. Encodes a member of a plant-specific class of histone deacetylases. Controls the development of adaxial/abaxial leaf polarity. Its mRNA is widely expressed in stems, leaves, flowers and young siliques. Plant lines expressing RNAi constructs directed against this gene showed a marked reduction in agrobacterium-mediated root transformation."]
[{"$nulls":18},"AT5G02620","ANK1",194.09,0.57269,0.16701,3.4291,{"v":0.000606,"d":"6.06E-04"},2.1549E-3,"full_name=ankyrin-like1. ankyrin-like1. Encodes a member of the ankyrin repeat protein. Localized in the endoplasmic reticulum.","AT3G52280","GTE6",230.23,0.61556,0.16366,3.7612,{"v":0.000169,"d":"1.69E-04"},{"v":0.000582,"d":"5.82E-04"},"full_name=general transcription factor group E6. general transcription factor group E6. Bromodomain containing nuclear-localized protein involved in leaf development. GTE6 binds to the promoter and intron of AS1 and regulates its expression via histone acetylation."]
[{"$nulls":18},"AT5G62230","ERL1",14.212,-2.3666,0.69067,-3.4266,{"v":6.11E-4,"d":"6.11E-04"},0.0021724,"full_name=ERECTA-like 1. ERECTA-like 1. Encodes a receptor-like kinase that, together with ER and ERL2 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. Along with erl2 functionally compensates for loss of erecta during integument development. Its transcript levels change after inducing MUTE expression in a mute background.","AT3G44540","FAR4",4.6608,-5.8418,1.5549,-3.757,{"v":0.000172,"d":"1.72E-04"},{"v":0.000591,"d":"5.91E-04"},"full_name=fatty acid reductase 4. fatty acid reductase 4. Encodes a member of the eight-member gene family encoding alcohol-forming fatty acyl-CoA reductases (FARs) identified in Arabidopsis thaliana. Three of the FARs, FAR1 (At5g22500), FAR4 (At3g44540) and FAR5 (At3g44550), are shown to generate the fatty alcohols found in root, seed coat, and wound-induced leaf tissue."]
[{"$nulls":18},"AT4G32600",null,384.04,0.4858,0.14196,3.4222,{"v":0.000621,"d":"6.21E-04"},0.0022051,"C3H4 type zinc finger protein.","AT5G14030",null,533.29,-0.43922,0.11707,-3.7518,{"v":1.76E-4,"d":"1.76E-04"},{"v":6.02E-4,"d":"6.02E-04"},"translocon-associated protein beta (TRAPB) family protein."]
[{"$nulls":18},"AT2G34510","ATHB-1",23.748,-1.5247,0.44609,-3.418,{"v":0.000631,"d":"6.31E-04"},0.002237,"choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642).","AT3G03776",null,18.101,2.1208,0.56584,3.7481,{"v":0.000178,"d":"1.78E-04"},{"v":6.11E-4,"d":"6.11E-04"},"hydroxyproline-rich glycoprotein family protein."]
[{"$nulls":18},"AT1G14830","DL1C",169.41,-0.60284,0.1766,-3.4135,{"v":0.000641,"d":"6.41E-04"},0.0022719,"full_name=DYNAMIN-like 1C. DYNAMIN-like 1C. Encodes a dynamin-like protein that is involved in mitochondrial morphogenesis and pollen development. Protein is localized as speckles in the cytoplasm, partially co-localizes with mitochondrial markers, cell plate of dividing cells, and the tip of root hairs, root cap cells, and expanding part of trichoblasts.","AT5G24470","PRR5",26.505,-1.5331,0.4094,-3.7448,{"v":0.000181,"d":"1.81E-04"},{"v":0.000618,"d":"6.18E-04"},"full_name=pseudo-response regulator 5. two-component response regulator-like protein. Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Acts as transcriptional repressor of CCA1 and LHY."]
[{"$nulls":18},"AT4G13590","CMT1",285.55,0.54945,0.16099,3.413,{"v":0.000643,"d":"6.43E-04"},0.0022738,"Uncharacterized protein family (UPF0016).","AT3G20050","TCP-1",700.5,0.43031,0.11505,3.7403,{"v":1.84E-4,"d":"1.84E-04"},{"v":6.29E-4,"d":"6.29E-04"},"full_name=T-complex protein 1 alpha subunit. T-complex protein 1 alpha subunit. Encodes a putative cytoplasmic chaperonin that is similar to mouse Tcp-1 (t complex polypeptide 1)."]
[{"$nulls":18},"AT1G80280",null,8.5115,-3.0648,0.89876,-3.41,{"v":0.00065,"d":"6.50E-04"},2.297E-3,"alpha/beta-Hydrolases superfamily protein.","AT1G18210",null,446.47,-0.57299,0.15327,-3.7384,{"v":1.85E-4,"d":"1.85E-04"},{"v":0.000633,"d":"6.33E-04"},"Calcium-binding EF-hand family protein."]
[{"$nulls":18},"AT5G45410","ATNHR2A",599.29,0.4418,0.12957,3.4098,{"v":0.00065,"d":"6.50E-04"},2.297E-3,"zinc finger B-box protein.","AT3G48200",null,15.258,2.1739,0.58206,3.7349,{"v":0.000188,"d":"1.88E-04"},{"v":0.000641,"d":"6.41E-04"},"transmembrane protein."]
[{"$nulls":18},"AT2G46390","SDH8",376.83,0.87936,0.25811,3.407,{"v":0.000657,"d":"6.57E-04"},0.002318,"full_name=succinate dehydrogenase 8. succinate dehydrogenase subunit. predicted to encode subunit 8 of mitochondrial complex II and to participate in the respiratory chain","AT4G11990","TPXL2",24.887,1.8759,0.50256,3.7326,{"v":0.000189,"d":"1.89E-04"},{"v":0.000646,"d":"6.46E-04"},"Cell cycle regulated microtubule associated protein."]
[{"$nulls":18},"AT1G67620",null,75.378,0.86006,0.25254,3.4057,{"v":6.6E-4,"d":"6.60E-04"},2.3268E-3,"Lojap-related protein.","AT3G61460","BRH1",13.565,-2.3568,0.63234,-3.727,{"v":1.94E-4,"d":"1.94E-04"},{"v":6.6E-4,"d":"6.60E-04"},"full_name=brassinosteroid-responsive RING-H2. brassinosteroid-responsive RING-H2. Encodes a novel ring finger protein and forms an N-terminal hydrophobic domain and a C-terminal RING-H2 signature. Expression is down regulated by brassinolide."]
[{"$nulls":18},"AT1G25275",null,8.4034,2.8721,0.84396,3.4031,{"v":0.000666,"d":"6.66E-04"},2.3452E-3,"thionin-like protein.","AT2G47440",null,18.454,-2.0716,0.55625,-3.7242,{"v":0.000196,"d":"1.96E-04"},{"v":0.000667,"d":"6.67E-04"},"Tetratricopeptide repeat (TPR)-like superfamily protein."]
[{"$nulls":18},"AT1G21410","SKP2A",372.43,0.46533,0.13677,3.4022,{"v":0.000668,"d":"6.68E-04"},0.0023518,"F-box/RNI-like superfamily protein. AtSKP2;1 is a homolog of human SKP2, the human F-box protein that recruits E2F1. Contains an F-box motif at the N-terminal region and a C-terminal Leu-rich repeat domain. Forms part of an E3-ubiquitin-ligase SCF (Skp1, cullin, F-box) complex and recruits phosphorylated AtE2Fc, a transcriptional factor that might play a role in cell division and during the transition from skotomorphogenesis to photomorphogenesis. AtSKP2;1 (At1g21410) and AtSKP2;2 (At1g77000) may be duplicated genes.","AT5G22270","SIED1",16.826,-2.6724,0.71768,-3.7236,{"v":0.000196,"d":"1.96E-04"},{"v":0.000668,"d":"6.68E-04"},"hypothetical protein."]
[{"$nulls":18},"AT1G05730",null,24.989,1.7968,0.52891,3.3972,{"v":0.000681,"d":"6.81E-04"},0.0023919,"FAM136A-like protein (DUF842).","AT1G05640",null,4.6724,5.5189,1.484,3.719,{"v":0.0002,"d":"2.00E-04"},{"v":0.000679,"d":"6.79E-04"},"Ankyrin repeat family protein."]
[{"$nulls":18},"AT2G14878",null,1199.7,0.44333,0.13066,3.393,{"v":0.000691,"d":"6.91E-04"},0.0024258,"other_RNA.","AT1G05150",null,1221.8,-0.41923,0.11285,-3.7149,{"v":2.03E-4,"d":"2.03E-04"},{"v":0.000689,"d":"6.89E-04"},"Calcium-binding tetratricopeptide family protein."]
[{"$nulls":18},"AT1G04530","TPR4",457.5,0.47025,0.13869,3.3906,{"v":0.000697,"d":"6.97E-04"},2.444E-3,"full_name=tetratricopeptide repeat 4. Tetratricopeptide repeat (TPR)-like superfamily protein. Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","AT5G64280","DiT2.2",258.7,0.56,0.15093,3.7103,{"v":0.000207,"d":"2.07E-04"},{"v":0.000701,"d":"7.01E-04"},"full_name=dicarboxylate transporter 2.2. dicarboxylate transporter 2.2."]
[{"$nulls":18},"AT1G55170",null,133.5,0.67095,0.19831,3.3833,{"v":0.000716,"d":"7.16E-04"},0.0025073,"DNA double-strand break repair protein.","AT2G18900",null,352.45,0.51127,0.13793,3.7068,{"v":0.00021,"d":"2.10E-04"},{"v":0.00071,"d":"7.10E-04"},"Transducin/WD40 repeat-like superfamily protein."]
[{"$nulls":18},"AT5G35370",null,14.971,1.8042,0.5337,3.3806,{"v":0.000723,"d":"7.23E-04"},0.0025295,"S-locus lectin protein kinase family protein.","AT5G19450","CDPK19",434.29,0.42978,0.11599,3.7054,{"v":0.000211,"d":"2.11E-04"},{"v":0.000713,"d":"7.13E-04"},"full_name=calcium-dependent protein kinase 19. calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete"]
[{"$nulls":18},"AT4G37390","BRU6",280.58,0.6037,0.17868,3.3787,{"v":0.000728,"d":"7.28E-04"},0.0025451,"Auxin-responsive GH3 family protein. Encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin. May function as a negative component in auxin signaling by regulating auxin activity.","AT4G27190",null,17.628,-2.1185,0.57227,-3.702,{"v":2.14E-4,"d":"2.14E-04"},{"v":0.000723,"d":"7.23E-04"},"NB-ARC domain-containing disease resistance protein."]
[{"$nulls":18},"AT1G07615","OBG A-1",107.4,0.70832,0.20978,3.3766,{"v":0.000734,"d":"7.34E-04"},0.002563,"GTP-binding protein Obg/CgtA.","AT4G34950","MFS1",11.404,-3.0844,0.83396,-3.6985,{"v":0.000217,"d":"2.17E-04"},{"v":0.000732,"d":"7.32E-04"},"Major facilitator superfamily protein."]
[{"$nulls":18},"AT4G30060",null,6.8388,-4.1679,1.2366,-3.3706,{"v":0.00075,"d":"7.50E-04"},0.0026164,"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein.","AT4G12750",null,268.23,0.49943,0.13516,3.6953,{"v":0.00022,"d":"2.20E-04"},{"v":0.000741,"d":"7.41E-04"},"Homeodomain-like transcriptional regulator."]
[{"$nulls":18},"AT5G51860","AGL72",3.5573,-5.1114,1.5171,-3.3691,{"v":7.54E-4,"d":"7.54E-04"},0.0026276,"full_name=AGAMOUS-like 72. K-box region and MADS-box transcription factor family protein. Encodes a MADS-box transcription factor involved in floral transition.","AT4G14950","KMS1",173.06,-0.74377,0.20148,-3.6916,{"v":2.23E-4,"d":"2.23E-04"},{"v":0.000751,"d":"7.51E-04"},"full_name=Killing Me Slowly 1. SNARE associated Golgi protein family. KMS1 encode a endoplasmic reticulum protein involved in the early secretory pathway."]
[{"$nulls":18},"AT5G07380",null,79.587,0.78352,0.23267,3.3675,{"v":0.000758,"d":"7.58E-04"},0.0026398,"hypothetical protein.","AT3G29185","BFA1",42.51,1.1843,0.32104,3.6888,{"v":0.000225,"d":"2.25E-04"},{"v":0.000758,"d":"7.58E-04"},"glutamate NMDA receptor subunit epsilon-1, putative (DUF3598)."]
[{"$nulls":18},"AT1G61790","OST3/6",186.82,-0.57248,0.17009,-3.3658,{"v":0.000763,"d":"7.63E-04"},0.0026534,"Oligosaccharyltransferase complex/magnesium transporter family protein.","AT2G12400",null,103.59,-0.7879,0.21392,-3.6832,{"v":0.00023,"d":"2.30E-04"},{"v":0.000774,"d":"7.74E-04"},"plasma membrane fusion protein."]
[{"$nulls":18},"AT5G66050",null,126.85,-0.77721,0.23104,-3.3639,{"v":0.000768,"d":"7.68E-04"},0.0026681,"Wound-responsive family protein.","AT3G59950",null,146.76,-0.69838,0.18982,-3.6791,{"v":2.34E-4,"d":"2.34E-04"},{"v":7.85E-4,"d":"7.85E-04"},"Peptidase family C54 protein."]
[{"$nulls":18},"AT4G31240","NRX2",233.36,-0.61123,0.18182,-3.3617,{"v":0.000775,"d":"7.75E-04"},0.0026865,"protein kinase C-like zinc finger protein.","AT2G22450","RIBA2",261.47,0.49537,0.1347,3.6774,{"v":0.000236,"d":"2.36E-04"},{"v":0.00079,"d":"7.90E-04"},"full_name=homolog of ribA 2. riboflavin biosynthesis protein."]
[{"$nulls":18},"AT3G58840","PMD1",162.96,0.93038,0.27694,3.3595,{"v":0.000781,"d":"7.81E-04"},0.0027053,"full_name=peroxisomal and mitochondrial division factor 1. Tropomyosin-like protein. Encodes PEROXISOMAL AND MITOCHONDRIAL DIVISION FACTOR1. Involved in the morphogenesis and proliferation of peroxisomes and mitochondria.","AT4G31070",null,31.521,1.3791,0.37516,3.6759,{"v":0.000237,"d":"2.37E-04"},{"v":7.94E-4,"d":"7.94E-04"},"PPR superfamily protein."]
[{"$nulls":18},"AT5G44320",null,350.57,0.4409,0.13132,3.3575,{"v":0.000787,"d":"7.87E-04"},0.0027219,"Eukaryotic translation initiation factor 3 subunit 7 (eIF-3).","AT2G39130",null,52.323,-1.1786,0.32113,-3.6702,{"v":2.42E-4,"d":"2.42E-04"},{"v":0.000811,"d":"8.11E-04"},"Transmembrane amino acid transporter family protein."]
[{"$nulls":18},"AT5G01200",null,29.9,-1.4115,0.42093,-3.3534,{"v":0.000798,"d":"7.98E-04"},0.0027597,"Duplicated homeodomain-like superfamily protein.","AT3G24929",null,48.055,1.1138,0.30375,3.6669,{"v":0.000246,"d":"2.46E-04"},{"v":0.000821,"d":"8.21E-04"},"hypothetical protein."]
[{"$nulls":18},"AT1G14120","ATDAO2",5.807,4.2874,1.2793,3.3515,{"v":0.000804,"d":"8.04E-04"},2.7751E-3,"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT2G28420","GLYI8",3793.1,0.30686,0.083724,3.6651,{"v":0.000247,"d":"2.47E-04"},{"v":8.25E-4,"d":"8.25E-04"},"full_name=glyoxylase I 8. Lactoylglutathione lyase / glyoxalase I family protein."]
[{"$nulls":18},"AT2G05840","PAA2",482.54,0.40071,0.11963,3.3497,{"v":0.000809,"d":"8.09E-04"},0.0027903,"full_name=20S proteasome subunit PAA2. 20S proteasome subunit PAA2. Encodes 20S proteasome subunit PAA2 (PAA2).","AT1G09020","SNF4",200.02,-0.55691,0.15202,-3.6633,{"v":0.000249,"d":"2.49E-04"},{"v":0.00083,"d":"8.30E-04"},"full_name=homolog of yeast sucrose nonfermenting 4. sucrose nonfermenting-like protein. putative activator subunit of SNF1-related protein kinase"]
[{"$nulls":18},"AT3G04650",null,26.739,1.5931,0.4758,3.3482,{"v":0.000813,"d":"8.13E-04"},0.0028045,"FAD/NAD(P)-binding oxidoreductase family protein.","AT1G33660",null,90.003,0.90223,0.24636,3.6622,{"v":0.00025,"d":"2.50E-04"},{"v":0.000833,"d":"8.33E-04"},"pseudogene. Pseudogene of AT1G33660; peroxidase family protein"]
[{"$nulls":18},"AT5G35590","PAA1",804.86,0.40719,0.12172,3.3454,{"v":0.000822,"d":"8.22E-04"},0.0028298,"full_name=proteasome alpha subunit A1. proteasome alpha subunit A1. Encodes 20S proteasome subunit PAA1 (PAA1).","AT2G33360",null,36.892,-1.2818,0.35041,-3.658,{"v":0.000254,"d":"2.54E-04"},{"v":0.000846,"d":"8.46E-04"},"cadherin EGF LAG seven-pass G-type receptor, putative (DUF3527)."]
[{"$nulls":18},"AT1G77090",null,365.21,0.47922,0.14333,3.3435,{"v":0.000827,"d":"8.27E-04"},0.0028465,"thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein).","AT5G51300","ATSF1",578.53,0.38068,0.10412,3.6563,{"v":0.000256,"d":"2.56E-04"},{"v":0.000851,"d":"8.51E-04"},"splicing factor-like protein. Encodes a nuclear localized splicing factor homolog that is involved in alternative splicing of some mRNAs."]
[{"$nulls":18},"AT1G03590",null,110.62,-0.76706,0.22963,-3.3405,{"v":0.000836,"d":"8.36E-04"},0.0028749,"Protein phosphatase 2C family protein.","AT5G39660","CDF2",230.6,0.54309,0.14861,3.6545,{"v":0.000258,"d":"2.58E-04"},{"v":0.000856,"d":"8.56E-04"},"full_name=cycling DOF factor 2. cycling DOF factor 2. Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions."]
[{"$nulls":18},"AT1G49050","APCB1",31.611,-1.3179,0.39473,-3.3387,{"v":0.000842,"d":"8.42E-04"},2.8893E-3,"Eukaryotic aspartyl protease family protein.","AT2G34340",null,23.808,-1.6472,0.45118,-3.6509,{"v":2.61E-4,"d":"2.61E-04"},{"v":0.000867,"d":"8.67E-04"},"senescence regulator (Protein of unknown function, DUF584)."]
[{"$nulls":18},"AT2G18910",null,24.198,-1.4309,0.42872,-3.3375,{"v":0.000845,"d":"8.45E-04"},0.0028987,"hydroxyproline-rich glycoprotein family protein.","AT5G22540",null,63.553,-1.0271,0.28153,-3.6484,{"v":0.000264,"d":"2.64E-04"},{"v":0.000875,"d":"8.75E-04"},"transmembrane protein, putative (DUF247)."]
[{"$nulls":18},"AT2G22250","AAT",80.025,-0.80596,0.24164,-3.3354,{"v":8.52E-4,"d":"8.52E-04"},0.0029184,"full_name=aspartate aminotransferase. aspartate aminotransferase. Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity.","AT1G31790",null,89.826,0.82185,0.22541,3.646,{"v":0.000266,"d":"2.66E-04"},{"v":0.000882,"d":"8.82E-04"},"Tetratricopeptide repeat (TPR)-like superfamily protein."]
[{"$nulls":18},"AT5G25930",null,25.35,-1.5001,0.45033,-3.3311,{"v":0.000865,"d":"8.65E-04"},0.0029595,"kinase family with leucine-rich repeat domain-containing protein.","AT1G78915",null,73.163,0.98306,0.26986,3.6429,{"v":2.7E-4,"d":"2.70E-04"},{"v":8.92E-4,"d":"8.92E-04"},"Tetratricopeptide repeat (TPR)-like superfamily protein."]
[{"$nulls":18},"AT4G30840","NUP43",22.975,1.5595,0.46833,3.3299,{"v":0.000869,"d":"8.69E-04"},0.0029695,"Transducin/WD40 repeat-like superfamily protein.","AT4G21740",null,23.881,-1.6373,0.44996,-3.6389,{"v":0.000274,"d":"2.74E-04"},{"v":0.000905,"d":"9.05E-04"},"transmembrane protein."]
[{"$nulls":18},"AT1G68460","IPT1",34.019,-1.3331,0.40077,-3.3263,{"v":0.00088,"d":"8.80E-04"},0.003004,"full_name=isopentenyltransferase 1. isopentenyltransferase 1. Encodes a putative adenylate isopentenyltransferase. It catalyzes the formation of isopentenyladenosine 5'-monophosphate (iPMP) from AMP and dimethylallylpyrophosphate (DMAPP), but it has a lower Km for ADP and likely works using ADP or ATP in plants. It is involved in cytokinin biosynthesis.","AT5G52230","MBD13",145.03,-0.73116,0.2012,-3.6341,{"v":0.000279,"d":"2.79E-04"},{"v":0.000921,"d":"9.21E-04"},"full_name=methyl-CPG-binding domain protein 13. methyl-CPG-binding domain protein 13. Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins."]
[{"$nulls":18},"AT4G11840","PLDGAMMA3",87.117,-0.80487,0.24204,-3.3253,{"v":8.83E-4,"d":"8.83E-04"},0.0030121,"full_name=phospholipase D gamma 3. phospholipase D gamma 3. member of C2-PLD subfamily","AT1G72070",null,15.596,2.2066,0.60738,3.633,{"v":0.00028,"d":"2.80E-04"},{"v":0.000923,"d":"9.23E-04"},"Chaperone DnaJ-domain superfamily protein."]
[{"$nulls":18},"AT2G41120",null,32.43,-1.2779,0.38481,-3.3209,{"v":0.000897,"d":"8.97E-04"},0.0030572,"DUF309 domain protein.","AT5G13510","EMB3136",81.535,0.97779,0.26951,3.628,{"v":0.000286,"d":"2.86E-04"},{"v":0.00094,"d":"9.40E-04"},"full_name=EMBRYO DEFECTIVE 3136. Ribosomal protein L10 family protein."]
[{"$nulls":18},"AT1G79610","NHX6",367.67,-0.43623,0.13145,-3.3186,{"v":0.000905,"d":"9.05E-04"},0.003079,"full_name=Na+/H+ antiporter 6. Na+/H+ antiporter 6. Encodes an endosomal Na(+)/H(+) antiporter: AT1G54370 (NHX5), AT1G79610 (NHX6). Double knockout nhx5 nhx6 showed reduced growth, with smaller and fewer cells and increased sensitivity to salinity.","AT1G24520","BCP1",27.159,3.0694,0.84643,3.6263,{"v":0.000288,"d":"2.88E-04"},{"v":0.000946,"d":"9.46E-04"},"full_name=homolog of Brassica campestris pollen protein 1. homolog of Brassica campestris pollen protein 1. Male fertility gene acting on tapetum and microspore"]
[{"$nulls":18},"AT3G26070","FBN3A",300.33,-0.48814,0.14724,-3.3154,{"v":0.000915,"d":"9.15E-04"},0.0031103,"Plastid-lipid associated protein PAP / fibrillin family protein.","AT1G64270",null,188.32,-0.64038,0.17675,-3.6231,{"v":0.000291,"d":"2.91E-04"},{"v":0.000956,"d":"9.56E-04"},"transposable_element_gene."]
[{"$nulls":18},"AT2G43010","PIF4",10.278,2.5799,0.77847,3.3141,{"v":9.19E-4,"d":"9.19E-04"},0.0031239,"full_name=phytochrome interacting factor 4. phytochrome interacting factor 4. Isolated as a semidominant mutation defective in red -light responses. Encodes a nuclear localized bHLH protein that interacts with active PhyB protein. Negatively regulates phyB mediated red light responses. Involved in shade avoidance response. Protein abundance is negatively regulated by PhyB.","AT3G27190","UKL2",53.283,-1.063,0.2935,-3.6218,{"v":0.000293,"d":"2.93E-04"},{"v":0.000961,"d":"9.61E-04"},"full_name=uridine kinase-like 2. uridine kinase-like 2. One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively."]
[{"$nulls":18},"AT1G34200",null,88.846,0.7757,0.23423,3.3118,{"v":0.000927,"d":"9.27E-04"},0.0031469,"Glyceraldehyde-3-phosphate dehydrogenase-like family protein.","AT1G49850",null,184.93,0.62158,0.17176,3.6188,{"v":0.000296,"d":"2.96E-04"},{"v":0.000971,"d":"9.71E-04"},"RING/U-box superfamily protein."]
[{"$nulls":18},"AT1G24706","THO2",655.73,0.44366,0.13414,3.3073,{"v":0.000942,"d":"9.42E-04"},0.0031937,"THO2. Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.","AT4G30950","FAD6",772.77,0.33129,0.091634,3.6154,{"v":0.0003,"d":"3.00E-04"},{"v":0.000983,"d":"9.83E-04"},"full_name=fatty acid desaturase 6. fatty acid desaturase 6. Chloroplastic enzyme responsible for the synthesis of 16:2 and 18:2 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene mutation resulted in reduced level of unsaturated fatty acids leading to susceptibility to photoinhibition."]
[{"$nulls":18},"AT3G57190","PrfB3",52.341,0.92605,0.28023,3.3046,{"v":0.000951,"d":"9.51E-04"},3.2212E-3,"full_name=peptide chain release factor 3. peptide chain release factor. Encodes a chloroplast stroma-localized ribosomal peptide chain release factor that is involved in the light- and stress-dependent regulation of stability of 3' processed petB transcripts to adjust cytochrome b(6) levels. It appears to bind to the 3'-UTR of petB RNA, protecting it from 3'-5' exonucleolytic attack. At-prfB3 arose from a gene duplication of At-prfB1.","AT1G31100",null,5.9912,-5.1988,1.4392,-3.6123,{"v":0.000304,"d":"3.04E-04"},{"v":0.000994,"d":"9.94E-04"},"transposable_element_gene."]
[{"$nulls":18},"AT5G18630",null,442.49,0.50279,0.15262,3.2945,{"v":0.000986,"d":"9.86E-04"},0.0033334,"alpha/beta-Hydrolases superfamily protein.","AT1G80080","TMM",7.1665,-4.5106,1.2508,-3.6063,{"v":0.000311,"d":"3.11E-04"},0.0010151,"full_name=TOO MANY MOUTHS. Leucine-rich repeat (LRR) family protein. Encodes a transmembrane leucine-repeat containing receptor-like protein that is expressed in proliferative postprotodermal cells. Recessive mutation leads to disruption of asymmetric cell division during stomata development. Its transcript levels change after inducing MUTE expression in a mute background."]
[{"$nulls":18},"AT1G24530",null,28.506,1.4744,0.44768,3.2934,{"v":0.00099,"d":"9.90E-04"},0.003344,"Transducin/WD40 repeat-like superfamily protein.","AT4G12300","CYP706A4",95.822,0.82113,0.22789,3.6032,{"v":0.000314,"d":"3.14E-04"},0.0010265,"full_name=cytochrome P450, family 706, subfamily A, polypeptide 4. cytochrome P450, family 706, subfamily A, polypeptide 4. member of CYP706A"]
[{"$nulls":18},"AT1G07135",null,24.201,1.9093,0.58001,3.2919,{"v":0.000995,"d":"9.95E-04"},0.0033587,"glycine-rich protein.","AT2G34260","WDR55",172.42,0.80587,0.22382,3.6006,{"v":0.000318,"d":"3.18E-04"},1.0359E-3,"full_name=human WDR55 (WD40 repeat) homolog. transducin family protein / WD-40 repeat family protein. Encodes a WDxR motif-containing protein that is required for gametogenesis, seed and endosperm development."]
[{"$nulls":18},"AT4G30890","UBP24",367.88,0.4607,0.14,3.2906,{"v":1E-3,"d":"1.00E-03"},0.0033713,"full_name=ubiquitin-specific protease 24. ubiquitin-specific protease 24. Encodes a ubiquitin-specific protease.","AT2G05310",null,48.911,-1.4606,0.40596,-3.5979,{"v":3.21E-4,"d":"3.21E-04"},0.0010454,"transmembrane protein."]
[{"$nulls":18},"AT2G34870","MEE26",20.525,-1.5808,0.48066,-3.2888,0.001006,0.0033882,"full_name=maternal effect embryo arrest 26. hydroxyproline-rich glycoprotein family protein.","AT1G75560",null,96.83,-0.80343,0.22347,-3.5952,{"v":0.000324,"d":"3.24E-04"},0.0010553,"zinc knuckle (CCHC-type) family protein."]
[{"$nulls":18},"AT3G20740","FIE",130.14,-0.67363,0.20502,-3.2856,1.0176E-3,3.424E-3,"full_name=FERTILIZATION-INDEPENDENT ENDOSPERM. Transducin/WD40 repeat-like superfamily protein. Encodes a protein similar to the transcriptional regular of the animal Polycomb group and is involved in regulation of establishment of anterior-posterior polar axis in the endosperm and repression of flowering during vegetative phase. Mutation leads endosperm to develop in the absence of fertilization and flowers to form in seedlings and non-reproductive organs. Also exhibits maternal effect gametophytic lethal phenotype, which is suppressed by hypomethylation. Forms part of a large protein complex that can include VRN2 (VERNALIZATION 2), VIN3 (VERNALIZATION INSENSITIVE 3) and polycomb group proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE), CURLY LEAF (CLF) and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization. In the ovule, the FIE transcript levels increase transiently just after fertilization.","AT2G47250",null,624.36,0.39649,0.11041,3.5911,{"v":0.000329,"d":"3.29E-04"},1.0711E-3,"RNA helicase family protein."]
[{"$nulls":18},"AT1G55270","SAGL1",66.843,-0.83186,0.25337,-3.2832,1.0264E-3,3.4513E-3,"Galactose oxidase/kelch repeat superfamily protein.","AT1G11800",null,97.254,-0.75649,0.21068,-3.5906,{"v":3.3E-4,"d":"3.30E-04"},0.0010722,"endonuclease/exonuclease/phosphatase family protein."]
[{"$nulls":18},"AT1G32930","GALT31A",6.5742,-4.1168,1.2559,-3.278,1.0455E-3,0.0035093,"Galactosyltransferase family protein.","AT1G05550","ATDOA2",7.1129,-4.5316,1.264,-3.585,{"v":0.000337,"d":"3.37E-04"},1.0937E-3,"hypothetical protein (DUF295)."]
[{"$nulls":18},"AT4G08390","SAPX",552.52,0.46892,0.14313,3.2762,1.052E-3,0.0035275,"full_name=stromal ascorbate peroxidase. stromal ascorbate peroxidase. Encodes a chloroplastic stromal ascorbate peroxidase sAPX. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.","AT3G09480",null,77.229,0.89141,0.24877,3.5833,{"v":3.39E-4,"d":"3.39E-04"},0.0010996,"Histone superfamily protein."]
[{"$nulls":18},"AT2G17975","SRP1",58.343,-1.1455,0.34968,-3.2758,1.0536E-3,0.0035324,"zinc finger (Ran-binding) family protein.","AT5G47140","GATA27",23.606,-1.7318,0.4833,-3.5832,{"v":3.39E-4,"d":"3.39E-04"},0.0010997,"full_name=GATA transcription factor 27. GATA transcription factor 27. Encodes a member of the GATA factor family of zinc finger transcription factors."]
[{"$nulls":18},"AT1G15950","CCR1",875.87,-0.41667,0.12729,-3.2733,0.001063,0.0035602,"full_name=cinnamoyl coa reductase 1. cinnamoyl coa reductase 1. Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis.","AT1G29340","PUB17",271.43,-0.56003,0.15644,-3.5799,{"v":0.000344,"d":"3.44E-04"},1.1129E-3,"full_name=plant U-box 17. plant U-box 17. Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity. It is required for cell death and full resistance specified by Arabidopsis RPM1 and RPS4 resistance proteins against Pseudomonas syringae pv tomato."]
[{"$nulls":18},"AT4G00330","CRCK2",53.18,-1.0298,0.31507,-3.2685,0.0010814,0.0036182,"full_name=calmodulin-binding receptor-like cytoplasmic kinase 2. calmodulin-binding receptor-like cytoplasmic kinase 2. high overall homology to CRCK1","AT3G27560","ATN1",164.35,-0.65784,0.18395,-3.5762,{"v":0.000349,"d":"3.49E-04"},1.1274E-3,"Protein kinase superfamily protein. encodes a protein with kinase domains, including catalytic domains for serine/threonine as well as tyrosine kinases. a member of multi-gene family and is expressed in all tissues examined."]
[{"$nulls":18},"AT1G02280","TOC33",184.51,0.54141,0.16579,3.2655,0.0010925,0.0036513,"full_name=translocon at the outer envelope membrane of chloroplasts 33. translocon at the outer envelope membrane of chloroplasts 33. Encodes a GTP-binding GTP-ase. Component of the chloroplast protein import machinery. Required for import of POR B into plastids. Toc33 phosphorylation may not play an important role in vivo.","AT5G11850","MKD1",63.765,-0.91188,0.25513,-3.5741,{"v":0.000351,"d":"3.51E-04"},1.1351E-3,"Protein kinase superfamily protein."]
[{"$nulls":18},"AT1G64820",null,17.882,1.9271,0.59042,3.2639,0.0010989,0.0036681,"MATE efflux family protein.","AT3G23490","CYN",885.09,0.64123,0.17958,3.5707,{"v":0.000356,"d":"3.56E-04"},0.0011486,"full_name=cyanase. cyanase. Encodes a cyanase that catalyzes the bicarbonate-dependent breakdown of cyanate to ammonia and bicarbonate. CYN forms a hexadecamer and is believed to be a cytosolic protein. Long-term exposure to NaCl increases CYN transcript levels. It is also expressed at higher levels in flowers relative to stems, roots, and seedlings."]
[{"$nulls":18},"AT4G13160",null,318.51,0.51383,0.15755,3.2614,1.1087E-3,3.6971E-3,"zein-binding protein (Protein of unknown function, DUF593).","AT3G05545",null,363.61,-0.43696,0.12251,-3.5668,{"v":0.000361,"d":"3.61E-04"},1.1649E-3,"RING/U-box superfamily protein."]
[{"$nulls":18},"AT1G62620",null,438.33,-0.47139,0.14461,-3.2597,0.0011154,3.715E-3,"Flavin-binding monooxygenase family protein.","AT3G58060","MTP8",107.02,-0.83377,0.23412,-3.5613,{"v":0.000369,"d":"3.69E-04"},0.0011881,"Cation efflux family protein."]
[{"$nulls":18},"AT4G27595",null,6.3385,-4.0566,1.2458,-3.2561,0.0011296,3.7586E-3,"WEB family protein (DUF827). Encodes a microtubule-associated protein.","AT1G52565",null,21.582,-1.7008,0.47771,-3.5603,{"v":0.00037,"d":"3.70E-04"},0.0011915,"cytochrome P450 family protein."]
[{"$nulls":18},"AT5G14040","PHT3;1",194.51,-0.67339,0.20691,-3.2545,0.0011361,3.7759E-3,"full_name=phosphate transporter 3;1. phosphate transporter 3;1. Encodes a mitochondrial phosphate transporter. Modulates plant responses to salt stress.","AT1G45110",null,30.685,1.4154,0.39803,3.556,{"v":0.000376,"d":"3.76E-04"},0.0012095,"Tetrapyrrole (Corrin/Porphyrin) Methylase."]
[{"$nulls":18},"AT5G10580",null,296.89,-0.4871,0.14977,-3.2524,0.0011445,0.0037999,"plant/protein (Protein of unknown function, DUF599).","AT1G04950","TAFII59",235.26,0.52933,0.14898,3.553,{"v":0.000381,"d":"3.81E-04"},0.0012226,"full_name=TATA BOX ASSOCIATED FACTOR II 59. TATA BOX ASSOCIATED FACTOR II 59. Encodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6. Mutants are embryo lethal and transmission of the mutant allele through the male gametophyte is significantly reduced. This is due to reduced pollen tube growth of the mutant."]
[{"$nulls":18},"AT4G22910","FZR2",33.481,-1.1702,0.36012,-3.2496,1.1557E-3,0.0038327,"full_name=FIZZY-related 2. FIZZY-related 2.","AT2G47630","MAGL9",74.763,-0.84542,0.23817,-3.5496,{"v":3.86E-4,"d":"3.86E-04"},0.0012367,"alpha/beta-Hydrolases superfamily protein."]
[{"$nulls":18},"AT2G34190",null,21.42,-1.5867,0.48859,-3.2476,1.1639E-3,0.0038556,"Xanthine/uracil permease family protein.","AT5G03070","IMPA-9",408.67,0.41832,0.118,3.545,{"v":0.000393,"d":"3.93E-04"},1.2572E-3,"full_name=importin alpha isoform 9. importin alpha isoform 9. Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype."]
[{"$nulls":18},"AT3G02890","AIPP2",1160,-0.38932,0.11993,-3.2463,0.0011693,0.0038696,"RING/FYVE/PHD zinc finger superfamily protein.","AT1G16610","SR45",490.65,0.48522,0.13694,3.5433,{"v":0.000395,"d":"3.95E-04"},1.2642E-3,"full_name=arginine/serine-rich 45. arginine/serine-rich 45. Encodes SR45, a member of the highly conserved family of serine/arginine-rich (SR) proteins, which play key roles in pre-mRNA splicing and other aspects of RNA metabolism. SR45 is a spliceosome protein, interacts with SR33 and the U1-70K protein of the U1 snRNP. Also involved in plant sugar response. sr45-1 mutation confers hypersensitivity to glucose during early seedling growth."]
[{"$nulls":18},"AT3G46720",null,3.2802,-4.9938,1.5387,-3.2455,1.1723E-3,0.0038786,"UDP-Glycosyltransferase superfamily protein.","AT1G61970","MTERF29",73.181,1.0125,0.28578,3.5429,{"v":0.000396,"d":"3.96E-04"},1.2656E-3,"Mitochondrial transcription termination factor family protein."]
[{"$nulls":18},"AT4G18760","RLP51",50.5,-0.95308,0.29391,-3.2428,0.0011836,3.9121E-3,"full_name=receptor like protein 51. receptor like protein 51.","AT1G48260","CIPK17",4.0108,-5.6238,1.5881,-3.5413,{"v":0.000398,"d":"3.98E-04"},0.0012723,"full_name=CBL-interacting protein kinase 17. CBL-interacting protein kinase 17. Encodes a member of the SNF1-related kinase (SnRK) gene family (SnRK3.21), which has also been reported as a member of the CBL-interacting protein kinases (CIPK17)."]
[{"$nulls":18},"AT5G51670",null,14.157,-2.1957,0.67848,-3.2362,1.2112E-3,0.0039956,"hypothetical protein (DUF668).","AT5G22300","NIT4",51.722,-1.1728,0.33178,-3.535,{"v":4.08E-4,"d":"4.08E-04"},1.3004E-3,"full_name=nitrilase 4. nitrilase 4. encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway."]
[{"$nulls":18},"AT1G68740","PHO1;H1",13.222,-2.2692,0.70124,-3.2359,1.2124E-3,0.0039979,"EXS (ERD1/XPR1/SYG1) family protein. Encodes PHO1;H1, a member of the PHO1 family. Involved in inorganic phosphate (Pi) transport and homeostasis. Complements pho1 mutation. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in shoots.","AT1G14710",null,90.756,-0.78367,0.22172,-3.5345,{"v":0.000409,"d":"4.09E-04"},1.3024E-3,"hydroxyproline-rich glycoprotein family protein."]
[{"$nulls":18},"AT4G15802","HSBP",128.18,-0.62029,0.19174,-3.2351,0.001216,4.006E-3,"full_name=heat shock factor binding protein. heat shock factor binding protein. Encodes a protein with similarity to heat shock factor binding proteins. Involved in negative regulation of heat shock response. Becomes nuclear localized upon heat treatment.","AT3G14040",null,25.996,3.1793,0.90065,3.5301,{"v":4.15E-4,"d":"4.15E-04"},1.323E-3,"Pectin lyase-like superfamily protein."]
[{"$nulls":18},"AT5G58960","GIL1",9.6197,-2.5263,0.78101,-3.2347,0.0012179,0.004008,"full_name=GRAVITROPIC IN THE LIGHT. glucose-6-phosphate isomerase, putative (DUF641). Mutant plants display impaired light-regulation of the hypocotyl randomization response.","AT5G59340","WOX2",169.73,2.6903,0.76307,3.5257,{"v":0.000422,"d":"4.22E-04"},1.3438E-3,"full_name=WUSCHEL related homeobox 2. WUSCHEL related homeobox 2. Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. WOX2 has a putative Zinc finger domain downstream of the homeodomain. Transcripts are expressed in the egg cell, the zygote and the apical cell lineage and are reduced in met3-1 early embryos. This gene is necessary for cell divisions that form the apical embryo domain."]
[{"$nulls":18},"AT2G41505",null,19.802,1.4927,0.46198,3.2311,0.0012333,4.0542E-3,"hypothetical protein.","AT5G46430",null,622.85,0.60787,0.17252,3.5235,{"v":4.26E-4,"d":"4.26E-04"},1.3533E-3,"Ribosomal protein L32e."]
[{"$nulls":18},"AT3G06690",null,68.8,0.86778,0.2688,3.2284,1.2449E-3,0.0040886,"putative acyl-coenzyme A oxidase.","AT5G02540",null,8.6277,-4.2371,1.2031,-3.5219,{"v":0.000429,"d":"4.29E-04"},0.0013604,"NAD(P)-binding Rossmann-fold superfamily protein."]
[{"$nulls":18},"AT4G27680",null,480.16,0.44766,0.1389,3.2229,0.001269,0.0041613,"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT3G10550","MTM1",408.25,0.43028,0.12229,3.5185,{"v":0.000434,"d":"4.34E-04"},0.0013754,"full_name=myotubularin 1. Myotubularin-like phosphatases II superfamily. Has 3'-phosphatase activity against both phosphatidylinositol-3,5-bisphosphate (PtdIns3,5P2) and Phosphatidylinositol-3-phosphate (PtdIns3P). The in vitro activity was higher with PtdIns3,5P2 than with PtdIns3P."]
[{"$nulls":18},"AT5G62290",null,134.08,0.59817,0.18581,3.2193,0.0012849,0.0042101,"nucleotide-sensitive chloride conductance regulator (ICln) family protein.","AT3G50260","CEJ1",6.7777,-4.4818,1.2755,-3.5138,{"v":0.000442,"d":"4.42E-04"},1.3992E-3,"full_name=cooperatively regulated by ethylene and jasmonate 1. cooperatively regulated by ethylene and jasmonate 1. Encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. Involved in defense and freezing stress responses. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10."]
[{"$nulls":18},"AT2G40690","GLY1",30.332,-1.2575,0.39085,-3.2172,0.0012945,0.0042373,"NAD-dependent glycerol-3-phosphate dehydrogenase family protein. Encodes a putative dihydroxyacetone phosphate (DHAP) reductase involved in glycerol-3-phosphate supply within the chloroplast for synthesis of glycerolipids. Mutants have reduced levels of hexadecatrienoic acid, which is rescued by exogenous glycerol-3-phosphate. This gene appears to be involved in the flux of fatty acids in the prokaryotic glyerolipid biosynthesis pathway.","AT1G74450",null,17.32,-2.0286,0.57748,-3.5129,{"v":0.000443,"d":"4.43E-04"},1.4024E-3,"BPS1-like protein (DUF793)."]
[{"$nulls":18},"AT5G08330","TCP11",20.006,-1.6559,0.51498,-3.2155,1.3021E-3,0.0042573,"full_name=TCP domain protein 11. TCP family transcription factor.","AT5G65207",null,190.43,0.5855,0.16687,3.5086,{"v":0.00045,"d":"4.50E-04"},1.4237E-3,"hypothetical protein."]
[{"$nulls":18},"AT5G47650","NUDT2",173.58,0.5367,0.16701,3.2135,1.3112E-3,0.0042829,"full_name=nudix hydrolase homolog 2. nudix hydrolase homolog 2. Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress.","AT2G17190","DSK2A",476.23,-0.40534,0.1157,-3.5033,{"v":0.00046,"d":"4.60E-04"},0.0014511,"ubiquitin family protein. Encodes a ubiquitin receptor protein that specifically associates with PEX2 and PEX12."]
[{"$nulls":18},"AT3G60780",null,109.4,-0.70103,0.21817,-3.2132,0.0013125,0.0042859,"hypothetical protein (DUF1442).","AT5G11710","EPS1",93.942,-0.76417,0.21822,-3.5019,{"v":0.000462,"d":"4.62E-04"},0.0014584,"ENTH/VHS family protein. EPSIN1 plays an important role in the vacuolar trafficking of soluble proteins at the trans-Golgi network via its interaction with gamma-ADR, VTI11, VSR1, and clathrin. Associated with actin filaments and with the Golgi complex. Expressed in most tissues."]
[{"$nulls":18},"AT1G80830","NRAMP1",132.6,-0.70404,0.21914,-3.2127,0.0013148,4.2889E-3,"full_name=natural resistance-associated macrophage protein 1. natural resistance-associated macrophage protein 1. Thought to be involved in iron homeostasis. Induced in leaves in response to iron deficiency. Transgenic plants accumulate toxic levels of iron. Gene complements yeast iron uptake mutants.","AT1G13220","LINC2",258.52,-0.84669,0.2419,-3.5001,{"v":0.000465,"d":"4.65E-04"},0.0014664,"full_name=LITTLE NUCLEI2. nuclear matrix constituent protein-like protein. Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure."]
[{"$nulls":18},"AT3G23180",null,360.07,0.44499,0.13867,3.2089,0.0013325,0.0043424,"HR-like lesion-inducing protein-like protein.","AT4G08170","ITPK3",646.85,-0.45433,0.12993,-3.4968,{"v":0.000471,"d":"4.71E-04"},1.4835E-3,"Inositol 1,3,4-trisphosphate 5/6-kinase family protein."]
[{"$nulls":18},"AT1G73810",null,45.721,-1.0527,0.32844,-3.2052,1.3499E-3,0.0043939,"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein.","AT2G20570","GPRI1",4.088,5.3262,1.5239,3.4951,{"v":0.000474,"d":"4.74E-04"},1.4911E-3,"full_name=GBF's pro-rich region-interacting factor 1. GBF's pro-rich region-interacting factor 1. Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus."]
[{"$nulls":18},"AT1G70320","UPL2",2410.5,0.47573,0.14857,3.202,1.3648E-3,0.0044376,"full_name=ubiquitin-protein ligase 2. ubiquitin-protein ligase 2. encodes a ubiquitin-protein ligase-like protein containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.","AT1G19800","ABCI14",109.78,-0.69617,0.19925,-3.4939,{"v":0.000476,"d":"4.76E-04"},0.0014963,"full_name=ATP-binding cassette I14. trigalactosyldiacylglycerol 1. Encodes a permease-like protein involved in lipid transfer from the ER to the chloroplast, more specifically, transfer of phosphatidate across the chloroplast inner membrane. Mutant leaves accumulate trigalactosyldiacylglycerol, triacylglycerol and phosphatidate. Chloroplast lipids are altered in their fatty acid composition and as a consequence the development of chloroplasts in the mutants are impacted. The mutant seeds has a higher abortion rate. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2."]
[{"$nulls":18},"AT1G14650",null,447.06,0.39689,0.124,3.2007,0.0013708,4.4535E-3,"SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein.","AT5G67030","ABA1",2295.1,0.43995,0.12601,3.4913,{"v":0.000481,"d":"4.81E-04"},0.0015093,"full_name=ABA DEFICIENT 1. zeaxanthin epoxidase (ZEP) (ABA1). Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do."]
[{"$nulls":18},"AT1G20050","HYD1",94.616,-0.83795,0.26203,-3.198,1.384E-3,0.0044912,"full_name=HYDRA1. C-8,7 sterol isomerase. C-8 sterol isomerase that also plays a role in miRNA function.","AT3G06325",null,29.648,1.4718,0.42245,3.4841,{"v":0.000494,"d":"4.94E-04"},0.0015492,"Natural antisense transcript overlaps with AT3G41762. Natural antisense transcript overlaps with AT3G41762"]
[{"$nulls":18},"AT5G51740","OMA1",535.08,0.50819,0.15896,3.197,1.3885E-3,0.0045015,"Peptidase family M48 family protein.","AT4G23840",null,144.69,0.73567,0.21126,3.4823,{"v":0.000497,"d":"4.97E-04"},1.5578E-3,"Leucine-rich repeat (LRR) family protein."]
[{"$nulls":18},"AT5G51830","FRK1",782.05,0.35997,0.11263,3.1961,0.0013929,0.0045096,"pfkB-like carbohydrate kinase family protein.","AT1G12240","ATBETAFRUCT4",33.105,-1.603,0.46075,-3.4792,{"v":0.000503,"d":"5.03E-04"},1.5742E-3,"Glycosyl hydrolases family 32 protein. Encodes a vacuolar invertase betaFruct4. betaFruct4 is transported from the endoplasmic reticulum through the intermediate compartments as a membrane protein. The N-terminal cytoplasmic domain contains multiple sequence motifs that are involved at various stages in the trafficking of betaFruct4 from the ER to the central vacuole."]
[{"$nulls":18},"AT3G55010","PUR5",74.226,0.80508,0.25203,3.1944,0.0014014,0.0045327,"phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5). encoding phosphoribosylformylglycinamidine cyclo-ligase (syn. AIR synthetase)that phosphorylates 5-phosphoribosyl-N-formylglycinamidine (FGAM) to form 5-aminoimidazole ribonucleotide (AIR)","AT3G53480","ABCG37",29.234,-1.6385,0.47137,-3.4759,{"v":0.000509,"d":"5.09E-04"},0.0015916,"full_name=ATP-binding cassette G37. pleiotropic drug resistance 9. Negative regulator of auxin polar transport inhibitors. ABCG37 regulates auxin distribution and homeostasis in roots by excluding IBA from the root apex, but does not act directly in basipetal transport. ABCG37 and ABCG36 act redundantly at outermost root plasma membranes and, transport IBA out of the cells. Also involved in root transmembrane secretion of fluorescent phenolics involved in Fe uptake."]
[{"$nulls":18},"AT1G52342",null,66.192,1.0062,0.31513,3.1931,0.0014078,0.004549,"hypothetical protein.","AT5G25590",null,337.51,-0.42265,0.12165,-3.4743,{"v":0.000512,"d":"5.12E-04"},1.5999E-3,"DNA ligase (DUF630 and DUF632)."]
[{"$nulls":18},"AT3G21070","NADK1",307.02,0.43656,0.13689,3.1892,1.4269E-3,0.0046055,"full_name=NAD kinase 1. NAD kinase 1. Encodes a protein with NAD(H) kinase activity.","AT1G26300",null,80.993,-0.81654,0.23527,-3.4706,{"v":0.000519,"d":"5.19E-04"},0.0016204,"BSD domain-containing protein."]
[{"$nulls":18},"AT2G45050","GATA2",3.3454,-5.0166,1.5738,-3.1875,0.001435,4.6273E-3,"full_name=GATA transcription factor 2. GATA transcription factor 2. Encodes a member of the GATA factor family of zinc finger transcription factors. A positive regulator of photomorphogenesis.","AT1G22180",null,246.59,-0.5397,0.15557,-3.4691,{"v":5.22E-4,"d":"5.22E-04"},0.0016276,"Sec14p-like phosphatidylinositol transfer family protein."]
[{"$nulls":18},"AT5G59890","ADF4",141.89,-0.85441,0.2682,-3.1858,0.0014438,4.6511E-3,"full_name=actin depolymerizing factor 4. actin depolymerizing factor 4. actin depolymerizing factor 4 (ADF4) mRNA, complete cds","AT5G59880","ADF3",863.25,-0.41144,0.11875,-3.4648,{"v":5.31E-4,"d":"5.31E-04"},0.0016522,"full_name=actin depolymerizing factor 3. actin depolymerizing factor 3. Encodes actin depolymerizing factor 3 (ADF3)."]
[{"$nulls":18},"AT5G48380","BIR1",215.01,0.57615,0.18086,3.1857,0.0014442,0.0046516,"full_name=BAK1-interacting receptor-like kinase 1. BAK1-interacting receptor-like kinase 1. Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway.","AT4G08470","MEKK3",91.367,0.77255,0.22304,3.4637,{"v":0.000533,"d":"5.33E-04"},1.6588E-3,"full_name=MAPK/ERK kinase kinase 3. MAPK/ERK kinase kinase 3. Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301."]
[{"$nulls":18},"AT1G80360","VAS1",215.4,-0.48936,0.15376,-3.1826,1.4597E-3,0.0046941,"Pyridoxal phosphate (PLP)-dependent transferases superfamily protein. Encodes a methionine-specific aminotransferase that uses the ethylene biosynthetic intermediate methionine as an amino donor and the auxin biosynthetic intermediate indole-3-pyruvic acid as an amino acceptor to produce L-tryptophan and 2-oxo-4-methylthiobutyric acid. These actions allow VAS1 to coordinate both auxin and ethylene biosynthesis. It functions downstream of TAA1/SAV3 but upstream of YUCs to negatively modulate IAA biosynthesis directly by altering the 3-IPA pool.","AT3G62010",null,222.82,0.56207,0.1624,3.461,{"v":0.000538,"d":"5.38E-04"},0.0016736,"metal ion-binding protein."]
[{"$nulls":18},"AT1G68340",null,76.621,0.79324,0.24933,3.1815,0.0014652,0.0047083,"hypothetical protein (DUF1639).","AT5G16460","SEIPIN1",791.05,0.34452,0.099622,3.4583,{"v":5.44E-4,"d":"5.44E-04"},0.0016884,"Putative adipose-regulatory protein (Seipin)."]
[{"$nulls":18},"AT1G70480","JASSY",42.963,-1.0557,0.33207,-3.1791,0.0014775,4.7437E-3,"OBP32pep, putative (DUF220).","AT4G36430",null,3.9442,-5.6022,1.6206,-3.4569,{"v":0.000546,"d":"5.46E-04"},0.0016957,"Peroxidase superfamily protein."]
[{"$nulls":18},"AT1G76450",null,45.784,-1.2412,0.39097,-3.1746,0.0015002,4.8119E-3,"Photosystem II reaction center PsbP family protein.","AT5G65430","GRF8",1043.5,0.36918,0.10688,3.4541,{"v":0.000552,"d":"5.52E-04"},1.712E-3,"full_name=general regulatory factor 8. general regulatory factor 8. member of 14-3-3 proteins. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1"]
[{"$nulls":18},"AT3G43505","LCR30",35.932,1.1431,0.36045,3.1714,1.5172E-3,0.004861,"full_name=low-molecular-weight cysteine-rich 30. low-molecular-weight cysteine-rich 30. Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.","AT4G02390","PARP2",7.8132,-4.085,1.1841,-3.4497,{"v":0.000561,"d":"5.61E-04"},0.0017375,"full_name=poly(ADP-ribose) polymerase 2. poly(ADP-ribose) polymerase. Encodes a DNA dependent nuclear poly (ADP-ribose) polymerase (E.C.2.4.2.30), thought to be involved in post-translational modification ."]
[{"$nulls":18},"AT5G20220",null,60.012,-0.90464,0.28555,-3.1681,0.0015343,0.0049111,"zinc knuckle (CCHC-type) family protein.","AT1G77080","MAF1",337.72,0.47789,0.13855,3.4493,{"v":5.62E-4,"d":"5.62E-04"},1.7388E-3,"full_name=MADS AFFECTING FLOWERING 1. K-box region and MADS-box transcription factor family protein. MADS domain protein - flowering regulator that is closely related to FLC. Deletion of this locus in Nd ecotype is correlated with earlier flowering in short days suggesting function as a negative regulator of flowering."]
[{"$nulls":18},"AT3G15540","IAA19",45.333,-1.1597,0.3665,-3.1644,0.0015542,0.0049674,"full_name=indole-3-acetic acid inducible 19. indole-3-acetic acid inducible 19. Primary auxin-responsive gene. Involved in the regulation stamen filaments development.","AT5G45560",null,7.1267,-3.9507,1.1459,-3.4476,{"v":0.000566,"d":"5.66E-04"},1.7476E-3,"Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein."]
[{"$nulls":18},"AT1G61820","BGLU46",112.66,-0.68802,0.2176,-3.1619,1.5673E-3,0.0050053,"full_name=beta glucosidase 46. beta glucosidase 46.","AT4G02230",null,638.56,0.49445,0.14349,3.4459,{"v":0.000569,"d":"5.69E-04"},0.001757,"Ribosomal protein L19e family protein."]
[{"$nulls":18},"AT3G45300","IVD",201.82,-0.50452,0.15966,-3.1599,1.5781E-3,0.0050349,"full_name=isovaleryl-CoA-dehydrogenase. isovaleryl-CoA-dehydrogenase. Encodes isovaleryl-coenzyme a dehydrogenase. Mutants have increases in 12 seed free amino acids, accumulation of seed homomethionine and 3-isovaleroyloxypropyl-glucosinolate, with a concomitant decrease in seed 3-benzoyloxypropyl-glucosinolate.","AT5G22740","CSLA02",17.837,-1.9094,0.55483,-3.4415,{"v":0.000579,"d":"5.79E-04"},0.0017841,"full_name=cellulose synthase-like A02. cellulose synthase-like A02. encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein"]
[{"$nulls":18},"AT5G60620","GPAT9",238.67,-0.47843,0.15153,-3.1573,0.0015925,0.0050753,"full_name=glycerol-3-phosphate acyltransferase 9. glycerol-3-phosphate acyltransferase 9. Glycerol-3-phosphate acyltransferase localized to the ER. Similar to mammalian cells involved in storage oil formation.","AT1G22350",null,145.18,-0.72571,0.21101,-3.4392,{"v":0.000583,"d":"5.83E-04"},0.0017973,"pseudogene."]
[{"$nulls":18},"AT3G62900",null,719.16,0.41962,0.13298,3.1556,0.0016015,0.005099,"CW-type Zinc Finger.","AT1G67880",null,60.677,-0.9854,0.28671,-3.4369,{"v":0.000588,"d":"5.88E-04"},0.0018107,"beta-1,4-N-acetylglucosaminyltransferase family protein."]
[{"$nulls":18},"AT5G46580","SOT1",62.018,0.82325,0.26103,3.1539,0.0016112,0.0051242,"pentatricopeptide (PPR) repeat-containing protein.","AT5G65920","PUB31",49.005,-1.1321,0.32975,-3.4333,{"v":0.000596,"d":"5.96E-04"},1.8334E-3,"ARM repeat superfamily protein."]
[{"$nulls":18},"AT5G04340","ZAT6",231.48,0.66326,0.21037,3.1529,1.6167E-3,0.0051407,"full_name=zinc finger of Arabidopsis thaliana 6. 6. putative c2h2 zinc finger transcription factor mRNA,","AT4G37590","NPY5",142.39,-0.6681,0.19468,-3.4318,{"v":0.0006,"d":"6.00E-04"},0.0018428,"full_name=NAKED PINS IN YUC MUTANTS 5. Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis."]
[{"$nulls":18},"AT4G15030",null,112.17,0.8539,0.27104,3.1504,0.0016302,5.1782E-3,"folate-sensitive fragile site protein.","AT2G46470","OXA1L",238.1,-0.49622,0.14465,-3.4306,{"v":6.02E-4,"d":"6.02E-04"},0.0018493,"full_name=inner membrane protein OXA1-like. inner membrane protein OXA1-like protein."]
[{"$nulls":18},"AT5G38280","PR5K",7.9034,-2.8365,0.90121,-3.1475,1.647E-3,0.0052257,"full_name=PR5-like receptor kinase. PR5-like receptor kinase. putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase","AT1G49390",null,140.95,0.64055,0.18707,3.4242,{"v":0.000617,"d":"6.17E-04"},0.0018914,"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein."]
[{"$nulls":18},"AT2G34357",null,341.24,0.41641,0.13235,3.1463,0.0016536,0.0052421,"ARM repeat superfamily protein.","AT3G11397","PRA1.A3",207.25,-0.54877,0.16053,-3.4184,{"v":0.00063,"d":"6.30E-04"},1.9303E-3,"full_name=prenylated RAB acceptor 1.A3. prenylated RAB acceptor 1.A3."]
[{"$nulls":18},"AT3G10370","SDP6",290.99,0.45574,0.14496,3.144,0.0016667,0.0052788,"full_name=SUGAR-DEPENDENT 6. FAD-dependent oxidoreductase family protein. mitochondrial FAD-dependent glycerol-3-phosphate dehydrogenase. possibly involved in storage lipid catabolism and glycerol assimilation, and in glycerol-3-phosphate shuttle which transports reducing power from cytosol to mitochondrion.","AT5G61030","GR-RBP3",159.5,0.70891,0.20749,3.4167,{"v":0.000634,"d":"6.34E-04"},1.9406E-3,"full_name=glycine-rich RNA-binding protein 3. glycine-rich RNA-binding protein 3. encodes a glycine-rich RNA binding protein. Gene expression is induced by cold."]
[{"$nulls":18},"AT5G16370","AAE5",349.76,0.50633,0.16131,3.1389,1.696E-3,0.0053635,"full_name=acyl activating enzyme 5. acyl activating enzyme 5.","AT3G51430","YLS2",201.24,0.70609,0.20675,3.4153,{"v":0.000637,"d":"6.37E-04"},1.9479E-3,"full_name=YELLOW-LEAF-SPECIFIC GENE 2. Calcium-dependent phosphotriesterase superfamily protein. Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity."]
[{"$nulls":18},"AT2G39020","NATA2",376.32,0.42326,0.13488,3.138,1.7009E-3,0.0053749,"Acyl-CoA N-acyltransferases (NAT) superfamily protein. Although this locus shares considerable sequence similarity with the adjacent NATA1 gene (At2g39030), they appear to encode genes with different functions. NATA1 is involved in the production of N-delta-acetylornithine, but, overexpression of At2g39020 in tobacco does not lead to the formation of this defense compound.","AT1G56500","SOQ1",90.387,0.81974,0.24013,3.4137,{"v":0.000641,"d":"6.41E-04"},1.9575E-3,"haloacid dehalogenase-like hydrolase family protein. Encodes a thylakoid membrane protein with thioredoxin-like and beta-propeller domains located in the lumen and a haloacid-dehalogenase domain exposed to the chloroplast stroma. The protein's role may be to prevent formation of a slowly reversible form of antenna quenching, thereby maintaining the efficiency of light harvesting."]
[{"$nulls":18},"AT1G15570","CYCA2;3",3.2954,-5.0074,1.5966,-3.1362,1.7116E-3,0.0054038,"full_name=CYCLIN A2;3. CYCLIN A2;3. A2-type cyclin. Negatively regulates endocycles and acts as a key regulator of ploidy levels in Arabidopsis endoreduplication. Interacts physically with CDKA;1. Expressed preferentially in trichomes and young developing tissues.","AT1G01080",null,11.713,2.4205,0.70938,3.4121,{"v":0.000645,"d":"6.45E-04"},0.0019674,"RNA-binding (RRM/RBD/RNP motifs) family protein."]
[{"$nulls":18},"AT5G19550","ASP2",585.77,-0.66649,0.21266,-3.1341,1.7239E-3,0.0054358,"full_name=aspartate aminotransferase 2. aspartate aminotransferase 2. Nitrogen metabolism. Major cytosolic isoenzyme controlling aspartate biosynthesis in the light.","AT5G35926",null,6.4893,-4.4225,1.2973,-3.409,{"v":0.000652,"d":"6.52E-04"},0.0019877,"Protein with RNI-like/FBD-like domain."]
[{"$nulls":18},"AT1G49980",null,101.58,0.74977,0.23937,3.1323,1.7343E-3,0.0054642,"DNA/RNA polymerases superfamily protein.","AT1G79810","TED3",284.07,0.51485,0.15118,3.4056,{"v":6.6E-4,"d":"6.60E-04"},0.0020107,"full_name=REVERSAL OF THE DET PHENOTYPE 3. Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein. Dominant suppressor of det1 phenotypes. Encodes a peroxisomal protein essential for Arabidopsis growth. Inserted directly from the cytosol into peroxisomes."]
[{"$nulls":18},"AT3G01920",null,64.584,0.85661,0.27365,3.1304,0.0017459,0.0054946,"DHBP synthase RibB-like alpha/beta domain-containing protein.","AT2G18630",null,99.302,-0.77968,0.22916,-3.4023,{"v":0.000668,"d":"6.68E-04"},0.0020321,"transmembrane protein, putative (DUF677)."]
[{"$nulls":18},"AT1G49320","USPL1",39.338,-1.0676,0.3411,-3.1299,0.0017485,0.0055008,"full_name=unknown seed protein like 1. unknown seed protein like 1. Encodes USPL1, a BURP domain protein targeted to the protein storage vacuoles. Overexpression of USPL1 affects seed development, protein storage vacuoles and lipid vesicles morphology and function.","AT1G06265",null,61.464,0.91965,0.2703,3.4023,{"v":0.000668,"d":"6.68E-04"},0.0020321,"Natural antisense transcript overlaps with AT1G06260. Potential natural antisense gene, locus overlaps with AT1G06260 Natural antisense transcript overlaps with AT1G06260"]
[{"$nulls":18},"AT2G17710",null,525.41,-0.57811,0.185,-3.1249,1.7787E-3,5.5864E-3,"Big1.","AT3G49540",null,33.734,2.7532,0.81097,3.3949,{"v":6.87E-4,"d":"6.87E-04"},2.0842E-3,"hypothetical protein."]
[{"$nulls":18},"AT3G47730","ABCA2",270.58,-0.48139,0.15407,-3.1245,1.781E-3,5.5924E-3,"full_name=ATP-binding cassette A2. ATP-binding cassette A2. member of ATH subfamily","AT2G22125","CSI1",308.98,-0.44091,0.12995,-3.3929,{"v":0.000692,"d":"6.92E-04"},0.0020992,"full_name=cellulose synthase-interactive protein 1. binding protein. Encodes a protein involved in cell elongation in root and anther filaments. Mutants have greater cell volumes in root tissues and have additive phenotypes with other cell expansion mutants such as those carrying mutations in COB, QUI and POM1 loci. POM2/CSI1 promotes Cellulose Synthase and microtubule co-alignment."]
[{"$nulls":18},"AT5G06830",null,197.2,-0.51272,0.16429,-3.1208,1.8035E-3,0.0056579,"hypothetical protein.","AT5G26990",null,52.03,-0.99508,0.29352,-3.3901,{"v":0.000699,"d":"6.99E-04"},2.1186E-3,"Drought-responsive family protein."]
[{"$nulls":18},"AT1G02140","MAGO",708.65,0.41894,0.13434,3.1186,0.0018168,0.0056935,"full_name=MAGO NASHI. mago nashi family protein. Encodes a homologue of the exon junction complex (EJC) component MAGO that participates in intron-mediated enhancement of gene expression.","AT1G05520","ATSEC23B",139.46,0.62122,0.18343,3.3867,{"v":0.000707,"d":"7.07E-04"},0.0021429,"Sec23/Sec24 protein transport family protein."]
[{"$nulls":18},"AT5G09230","SRT2",91.758,-0.67973,0.21814,-3.1161,1.8326E-3,0.0057374,"full_name=sirtuin 2. sirtuin 2. Encodes SRT2, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).","AT5G62220","GT18",559.84,-0.40755,0.12055,-3.3808,{"v":0.000723,"d":"7.23E-04"},0.0021872,"full_name=glycosyltransferase 18. glycosyltransferase 18. Encodes a Golgi apparatus-localized galactosyltransferase involved in galactosyl-substitution of xyloglucan at position 2."]
[{"$nulls":18},"AT2G18938",null,9.7962,-2.4387,0.78303,-3.1145,1.8426E-3,0.0057625,"transmembrane protein.","AT1G56610",null,173.27,0.566,0.16768,3.3755,{"v":0.000737,"d":"7.37E-04"},2.2277E-3,"Protein with RNI-like/FBD-like domain."]
[{"$nulls":18},"AT1G78660","GGH1",18.298,-2.0149,0.64772,-3.1108,1.8656E-3,0.005828,"full_name=gamma-glutamyl hydrolase 1. gamma-glutamyl hydrolase 1. The Arabidopsis protein AtGGH1 is a gamma-glutamyl hydrolase cleaving pentaglutamates to yield di- and triglutamates. The enzyme is involved in the tetrahydrofolate metabolism and located to the vacuole.","AT2G01960","TET14",3.6727,-5.486,1.627,-3.3718,{"v":0.000747,"d":"7.47E-04"},0.002255,"full_name=tetraspanin14. tetraspanin14. Member of TETRASPANIN family"]
[{"$nulls":18},"AT1G07030","MIT2",210.86,0.48153,0.15491,3.1085,1.8804E-3,0.0058671,"Mitochondrial substrate carrier family protein.","AT3G50650",null,489.29,-0.37902,0.11248,-3.3698,{"v":0.000752,"d":"7.52E-04"},0.0022695,"GRAS family transcription factor."]
[{"$nulls":18},"AT1G77300","EFS",521.23,0.42964,0.13825,3.1077,1.8858E-3,0.0058801,"full_name=EARLY FLOWERING IN SHORT DAYS. histone-lysine N-methyltransferase. Encodes a protein with histone lysine N-methyltransferase activity required specifically for the trimethylation of H3-K4 in FLC chromatin (and not in H3-K36 dimethylation). Acts as an inhibitor of flowering specifically involved in the autonomous promotion pathway. EFS also regulates the expression of genes involved in carotenoid biosynthesis.Modification of histone methylation at the CRTISO locus reduces transcript levels 90%. The increased shoot branching seen in some EFS mutants is likely due to the carotenoid biosynthesis defect having an effect on stringolactones.Required for ovule, embryo sac, anther and pollen development.","AT2G17440","PIRL5",82.465,0.89663,0.26627,3.3674,{"v":0.000759,"d":"7.59E-04"},0.0022869,"full_name=plant intracellular ras group-related LRR 5. plant intracellular ras group-related LRR 5. Encodes PIRL5, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction."]
[{"$nulls":18},"AT2G36050","OFP15",9.06,-2.6348,0.84844,-3.1054,0.0018999,0.0059176,"full_name=ovate family protein 15. ovate family protein 15.","AT1G03950","VPS2.3",117.16,-0.65658,0.19514,-3.3647,{"v":0.000766,"d":"7.66E-04"},0.0023069,"full_name=vacuolar protein sorting-associated protein 2.3. vacuolar protein sorting-associated protein 2.3."]
[{"$nulls":18},"AT4G26220","CCOAOMT7",152.78,-0.54367,0.17524,-3.1024,1.9196E-3,5.9733E-3,"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. Encodes a caffeoyl-coenzyme A O-methyltransferase (CCoAOMT)-like protein with a strong preference for methylating the para position of flavanones and dihydroflavonols, whereas flavones and flavonols are methylated in the meta-position.","AT2G41080",null,21.952,1.5475,0.46011,3.3632,{"v":0.00077,"d":"7.70E-04"},2.317E-3,"pentatricopeptide (PPR) repeat protein."]
[{"$nulls":18},"AT2G38940","PHT1;4",8.1714,2.8177,0.9088,3.1005,0.0019319,0.0060071,"full_name=phosphate transporter 1;4. phosphate transporter 1;4. Encodes Pht1;4, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341). Expression is upregulated in the shoot of cax1/cax3 mutant and is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots.","AT1G06230","GTE4",970.29,0.53527,0.1592,3.3622,{"v":0.000773,"d":"7.73E-04"},0.0023242,"full_name=global transcription factor group E4. global transcription factor group E4. This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation."]
[{"$nulls":18},"AT5G16453",null,3.236,-4.9567,1.6015,-3.0951,0.0019676,0.0061094,"Defensin-like (DEFL) family protein. Encodes a defensin-like (DEFL) family protein.","AT4G08310",null,575.79,0.46694,0.13897,3.3599,{"v":0.00078,"d":"7.80E-04"},2.3395E-3,"DNA ligase."]
[{"$nulls":18},"AT3G19570","SCO3",48.32,-0.92127,0.29803,-3.0911,0.0019939,0.0061851,"full_name=SNOWY COTYLEDON 3. SNOWY COTYLEDON protein (DUF566). Encodes SCO3 (snowy cotyledon3), a member of a largely uncharacterized protein family unique to the plant kingdom. The sco3-1 mutation alters chloroplast morphology and development, reduces chlorophyll accumulation, impairs thylakoid formation and photosynthesis in seedlings, and results in photoinhibition under extreme CO(2) concentrations in mature leaves. SCO3 is targeted to the periphery of peroxisomes.","AT1G26670","VTI1B",309.7,-0.44786,0.13335,-3.3586,{"v":0.000784,"d":"7.84E-04"},0.0023494,"Vesicle transport v-SNARE family protein. member of VTI1 Gene Family. Normally localizes to the transgolgi network and plasma membrane. A dominant mutation (zip1) alters the subcellular localization of VTI12 and suppresses loss of function mutation (zag1) of VTI11. Interacts with members of the SYP family. Involved in protein trafficking to protein storage vacuoles."]
[{"$nulls":18},"AT2G28260","CNGC15",17.744,-1.8362,0.59416,-3.0905,0.0019985,0.0061982,"full_name=cyclic nucleotide-gated channel 15. cyclic nucleotide-gated channel 15. member of Cyclic nucleotide gated channel family","AT1G70080","TPS6",7.0377,4.232,1.2606,3.3572,{"v":0.000787,"d":"7.87E-04"},2.3606E-3,"Terpenoid cyclases/Protein prenyltransferases superfamily protein."]
[{"$nulls":18},"AT1G55820",null,79.198,0.74321,0.24066,3.0883,0.0020132,0.0062383,"lysine-specific demethylase, putative (DUF1296).","AT2G27389",null,11.084,-2.2574,0.67299,-3.3543,{"v":0.000796,"d":"7.96E-04"},0.0023829,"hypothetical protein."]
[{"$nulls":18},"AT4G28360",null,87.091,-0.89115,0.28897,-3.0839,0.0020433,0.0063246,"Ribosomal protein L22p/L17e family protein.","AT1G67940","ABCI17",3.5062,-5.4291,1.6191,-3.3531,{"v":0.000799,"d":"7.99E-04"},2.3904E-3,"full_name=ATP-binding cassette I17. non-intrinsic ABC protein 3. member of NAP subfamily"]
[{"$nulls":18},"AT5G47180",null,37.847,-1.035,0.33605,-3.0798,2.0712E-3,0.0064015,"Plant VAMP (vesicle-associated membrane protein) family protein.","AT1G64080","MAKR2",158.91,-0.5646,0.16858,-3.3491,{"v":0.000811,"d":"8.11E-04"},0.0024223,"full_name=MEMBRANE-ASSOCIATED KINASE REGULATOR 2. membrane-associated kinase regulator. Encodes a member of the MAKR (MEMBRANE-ASSOCIATED KINASE REGULATOR) gene family. MAKRs have putative kinase interacting motifs and membrane localization signals. Known members include: AT5G26230 (MAKR1), AT1G64080 (MAKR2), AT2G37380 (MAKR3), AT2G39370 (MAKR4), AT5G52870 (MAKR5) and AT5G52900 (MAKR6)."]
[{"$nulls":18},"AT3G07500","FRF2",166.24,0.53955,0.17527,3.0784,0.0020814,6.4294E-3,"Far-red impaired responsive (FAR1) family protein.","AT1G06040","STO",106,-0.6784,0.20261,-3.3482,{"v":0.000813,"d":"8.13E-04"},0.0024284,"full_name=SALT TOLERANCE. B-box zinc finger family protein. Encodes salt tolerance protein (STO) which confers salt tolerance to yeast cells. Fully complements calcineurin deficient yeast but does not encode a phosphoprotein phosphatase. Sequence has similarities to CONSTANS. STO co-localizes with COP1 and plays a role in light signaling."]
[{"$nulls":18},"AT1G14030","LSMT-L",8.2901,-2.7014,0.87828,-3.0758,0.0020996,0.006478,"full_name=lysine methyltransferase (LSMT)-like. Rubisco methyltransferase family protein. Encodes a lysine methyltransferase whose main soluble physiological substrates are chloroplastic fructose 1,6-bisphosphate aldolases, FBA1, FBA2, and FBA3. Lysines near the C-terminal end of the target proteins are trimethylated.","AT2G40820",null,9.4231,-4.2693,1.2757,-3.3466,{"v":0.000818,"d":"8.18E-04"},0.0024397,"stomatal closure actin-binding-like protein."]
[{"$nulls":18},"AT2G33880","HB-3",58.38,-0.96091,0.31255,-3.0744,2.1094E-3,0.0065029,"full_name=homeobox-3. homeobox-3. Encodes a protein with similarity to WUS type homeodomain protein. Required for meristem growth and development and acts through positive regulation of WUS. Loss of function phenotypes include embryo lethality, hyponastic cotyledons, reduced root development and smaller meristems. Phenotypes can be rescued by addition of sucrose in the growth media. Overexpression can partially rescue the triple mutant cytokinin receptor phenotype suggesting HB-3 is a downstream effector of cytokinin signaling.","AT2G41880","GK-1",167.46,-0.58768,0.1757,-3.3448,{"v":0.000823,"d":"8.23E-04"},0.0024538,"full_name=guanylate kinase 1. guanylate kinase 1. Guanylate kinase. Involved in nucleotide metabolism."]
[{"$nulls":18},"AT4G15955",null,46.469,0.91066,0.29637,3.0727,0.0021214,0.0065338,"alpha/beta-Hydrolases superfamily protein.","AT3G21140",null,287.11,0.46046,0.13773,3.3432,{"v":0.000828,"d":"8.28E-04"},0.0024658,"Pyridoxamine 5'-phosphate oxidase family protein."]
[{"$nulls":18},"AT1G14720","XTH28",817.74,0.40614,0.13229,3.0702,0.0021395,0.0065824,"full_name=xyloglucan endotransglucosylase/hydrolase 28. xyloglucan endotransglucosylase/hydrolase 28. member of Glycoside Hydrolase Family 16","AT3G57520","SIP2",357.75,0.70791,0.21184,3.3417,{"v":0.000833,"d":"8.33E-04"},0.0024766,"full_name=seed imbibition 2. seed imbibition 2. SIP2 encodes a raffinose-specific alpha-galactosidase that catalyzes the breakdown of raffinose into alpha-galatose and sucrose. This enzyme may function in unloading raffinose from the phloem as part of sink metabolism. Although it was originally predicted to act as a raffinose synthase (RS), that activity was not observed for recombinant SIP2."]
[{"$nulls":18},"AT3G63340",null,862.79,0.35497,0.11564,3.0696,0.0021436,0.0065929,"kinase superfamily protein.","AT3G18710","PUB29",4.5492,-5.8055,1.7378,-3.3407,{"v":0.000836,"d":"8.36E-04"},2.4843E-3,"full_name=plant U-box 29. plant U-box 29. Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays."]
[{"$nulls":18},"AT5G46600",null,11.747,-2.7402,0.89389,-3.0655,2.173E-3,0.0066711,"aluminum activated malate transporter family protein.","AT5G18040","HTT2",148.07,0.59266,0.17766,3.3359,{"v":0.00085,"d":"8.50E-04"},0.0025227,"target of trans acting-siR480/255 protein."]
[{"$nulls":18},"AT3G08580","AAC1",852.55,-0.39883,0.13019,-3.0634,0.0021881,0.0067113,"full_name=ADP/ATP carrier 1. ADP/ATP carrier 1. mitochondrial ADP/ATP carrier","AT5G08290","YLS8",535.92,-0.42011,0.12601,-3.334,{"v":0.000856,"d":"8.56E-04"},0.0025381,"full_name=YELLOW-LEAF-SPECIFIC GENE 8. mRNA splicing factor, thioredoxin-like U5 snRNP. Encodes Dim1 homolog."]
[{"$nulls":18},"AT4G00238","ATSTKL1",304.89,-0.46685,0.15252,-3.0608,0.0022072,0.0067638,"DNA-binding storekeeper protein-related transcriptional regulator.","AT5G16820","HSF3",429.24,0.4274,0.12825,3.3326,{"v":0.00086,"d":"8.60E-04"},0.0025486,"full_name=heat shock factor 3. heat shock factor 3. Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes."]
[{"$nulls":18},"AT1G17120","CAT8",69.049,-0.90482,0.29563,-3.0607,0.0022084,6.7662E-3,"full_name=cationic amino acid transporter 8. cationic amino acid transporter 8. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs.","AT4G27745",null,77.362,-0.86662,0.26007,-3.3322,{"v":0.000862,"d":"8.62E-04"},0.0025516,"Yippee family putative zinc-binding protein."]
[{"$nulls":18},"AT1G31870","BUD13",300.56,0.49662,0.16246,3.0569,0.0022367,0.0068466,"pre-mRNA-splicing factor of RES complex protein.","AT3G44450","BIC2",9.6972,-2.4555,0.73856,-3.3247,{"v":0.000885,"d":"8.85E-04"},2.6186E-3,"hypothetical protein."]
[{"$nulls":18},"AT1G56230",null,9.7623,-2.3532,0.77006,-3.0558,2.2445E-3,0.0068643,"enolase (DUF1399).","AT5G59760",null,12.885,2.1106,0.63519,3.3228,{"v":0.000891,"d":"8.91E-04"},0.0026344,"hypothetical protein (DUF1635)."]
[{"$nulls":18},"AT3G22750",null,535.81,-0.46703,0.15297,-3.0532,2.2645E-3,0.0069155,"Protein kinase superfamily protein.","AT4G26840","SUMO1",155.68,0.59888,0.18055,3.3169,{"v":9.1E-4,"d":"9.10E-04"},0.0026867,"full_name=small ubiquitin-like modifier 1. small ubiquitin-like modifier 1. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets."]
[{"$nulls":18},"AT5G20590","TBL5",42.626,-0.96938,0.3178,-3.0503,2.2859E-3,0.0069758,"full_name=TRICHOME BIREFRINGENCE-LIKE 5. TRICHOME BIREFRINGENCE-LIKE 5. Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT1G17110","UBP15",494.43,-0.78007,0.2353,-3.3153,{"v":0.000916,"d":"9.16E-04"},2.7006E-3,"full_name=ubiquitin-specific protease 15. ubiquitin-specific protease 15. Encodes a ubiquitin-specific protease, and its activity has been confirmed in an in vitro assay. ubp15 mutants have defects in cell proliferation, and the associated processes of leaf, root, stem, flower, and silique development. UBP15 can be found in the nucleus and cytoplasm in transient assays. Though UBP15 is expressed in many tissues, UBP15 transcript levels are higher in rosette leaves and inflorescences than in other parts of the plant."]
[{"$nulls":18},"AT1G71860","PTP1",68.045,-0.77124,0.25301,-3.0483,2.3016E-3,0.007016,"full_name=protein tyrosine phosphatase 1. protein tyrosine phosphatase 1. Encodes a protein with tyrosine phosphatase activity that is downregulated in response to cold and upregulated in response to salt stress.","AT1G47750","PEX11A",60.221,-0.923,0.2787,-3.3118,{"v":0.000927,"d":"9.27E-04"},0.0027313,"full_name=peroxin 11A. peroxin 11A. member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation."]
[{"$nulls":18},"AT3G23000","CIPK7",118.11,-0.73538,0.2415,-3.0451,0.002326,0.0070839,"full_name=CBL-interacting protein kinase 7. CBL-interacting protein kinase 7. Encodes a serine/threonine protein kinase with similarities to CBL-interacting protein kinases, SNF1 and SOS2.","AT5G52920","PKP-BETA1",669.78,0.55458,0.16764,3.3082,{"v":0.000939,"d":"9.39E-04"},0.0027642,"full_name=plastidic pyruvate kinase beta subunit 1. plastidic pyruvate kinase beta subunit 1. encodes a dominant chloroplast pyruvate kinase beta subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mutant plant has wrinkled seeds, with a 50-70% reduction in seed fatty acid content."]
[{"$nulls":18},"AT3G28200",null,32.954,-1.3101,0.43036,-3.0442,0.0023327,0.0070979,"Peroxidase superfamily protein.","AT3G19740",null,526.16,0.36652,0.11086,3.3062,{"v":0.000946,"d":"9.46E-04"},2.7816E-3,"P-loop containing nucleoside triphosphate hydrolases superfamily protein."]
[{"$nulls":18},"AT3G58070","GIS",9.9161,-2.2416,0.73699,-3.0416,0.0023534,0.0071533,"full_name=GLABROUS INFLORESCENCE STEMS. C2H2 and C2HC zinc fingers superfamily protein. Putative transcription factor, contains C2H2 domain, regulates aspects of shoot maturation in Arabidopsis thaliana. GIS loss-of-function mutations affect the epidermal differentiation of inflorescence organs, causing a premature decrease in trichome production on successive leaves, stem internodes, and branches. Overexpression has the opposite effect on trichome initiation and causes other heterochronic phenotypes, affecting flowering and juvenile%E2%80%93adult leaf transition and inducing the formation of rosette leaves on inflorescence stems.","AT5G10550","GTE2",279.74,-0.4336,0.13128,-3.3029,{"v":0.000957,"d":"9.57E-04"},0.0028117,"full_name=global transcription factor group E2. global transcription factor group E2. This gene is predicted to encode a bromodomain-containing protein. A plant line expressing RNAi constructs targeted against GTE7 shows some resistance to agrobacterium-mediated root transformation."]
[{"$nulls":18},"AT1G48580",null,54.524,0.85231,0.28036,3.0401,2.3652E-3,7.1801E-3,"nuclear localized protein.","AT4G15240",null,111.8,0.65336,0.19801,3.2995,{"v":9.68E-4,"d":"9.68E-04"},2.8417E-3,"glycosyltransferase (DUF604)."]
[{"$nulls":18},"AT2G18730","DGK3",60.879,-0.9726,0.32021,-3.0373,0.0023868,0.0072392,"full_name=diacylglycerol kinase 3. diacylglycerol kinase 3.","AT2G44770",null,136.68,-0.72365,0.21953,-3.2964,{"v":0.000979,"d":"9.79E-04"},0.0028714,"ELMO/CED-12 family protein."]
[{"$nulls":18},"AT4G32910","SBB1",230.91,0.48684,0.16056,3.0322,0.0024277,0.0073567,"nuclear pore complex Nup85-like protein.","AT2G42670","PCO4",53.174,-0.93889,0.285,-3.2944,{"v":0.000986,"d":"9.86E-04"},2.8885E-3,"2-aminoethanethiol dioxygenase, putative (DUF1637)."]
[{"$nulls":18},"AT2G38730",null,101.46,0.64777,0.21371,3.0311,2.4367E-3,0.0073772,"Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein.","AT1G62810","CuAO1",191.86,0.52721,0.16011,3.2927,{"v":0.000992,"d":"9.92E-04"},0.0029039,"full_name=COPPER AMINE OXIDASE1. Copper amine oxidase family protein. Encodes COPPER AMINE OXIDASE1 (CuAO1). Contributes to abscisic acid- and polyamine-induced nitric oxide biosynthesis and abscisic acid signal transduction."]
[{"$nulls":18},"AT4G01160","LRB3",5.731,-3.8314,1.2642,-3.0306,0.0024403,0.0073869,"full_name=light-response BTB 3. BTB/POZ/Kelch-associated protein. Encodes a member of LRB BTB family. It does not appear to participate in red light responses like LRB1 and LRB2.","AT1G80890","OEP9.2",197.86,0.78353,0.23797,3.2926,{"v":0.000993,"d":"9.93E-04"},0.0029048,"GAG1At protein."]
[{"$nulls":18},"AT5G57210",null,31.034,-1.1532,0.38074,-3.029,2.454E-3,0.0074216,"Ypt/Rab-GAP domain of gyp1p superfamily protein.","AT3G47670",null,124.25,-0.6606,0.20073,-3.2911,{"v":0.000998,"d":"9.98E-04"},0.0029178,"Plant invertase/pectin methylesterase inhibitor superfamily protein."]
[{"$nulls":18},"AT3G47510",null,20.859,1.4533,0.48021,3.0265,0.0024744,0.0074753,"transmembrane protein.","AT2G18240",null,174.05,-0.5859,0.17815,-3.2887,0.0010063,0.0029388,"Rer1 family protein."]
[{"$nulls":18},"AT1G76490","HMG1",645.5,-0.33671,0.11131,-3.0249,2.4873E-3,0.0075064,"full_name=hydroxy methylglutaryl CoA reductase 1. hydroxy methylglutaryl CoA reductase 1. Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine","AT2G45530",null,82.597,0.83575,0.25425,3.2871,1.0123E-3,0.002953,"RING/U-box superfamily protein."]
[{"$nulls":18},"AT3G62860","MAGL12",23.553,-1.47,0.48606,-3.0242,0.0024926,0.0075155,"alpha/beta-Hydrolases superfamily protein.","AT1G75290",null,63.65,-0.88681,0.26999,-3.2847,1.021E-3,0.0029758,"NAD(P)-binding Rossmann-fold superfamily protein. encodes a protein whose sequence is similar to an isoflavone reductase"]
[{"$nulls":18},"AT1G13635",null,6.6557,-2.9972,0.99208,-3.0211,0.0025184,7.5854E-3,"DNA glycosylase superfamily protein.","AT5G35735",null,6.918,-3.4497,1.0513,-3.2812,1.0337E-3,0.0030094,"Auxin-responsive family protein."]
[{"$nulls":18},"AT3G47680",null,341.11,-0.45648,0.15121,-3.0189,0.0025367,0.0076335,"DNA binding protein.","AT4G35070",null,344.8,-0.58685,0.17891,-3.2802,1.0374E-3,0.0030175,"SBP (S-ribonuclease binding protein) family protein."]
[{"$nulls":18},"AT2G18465","DJC72",62.567,-0.82057,0.27193,-3.0176,0.002548,0.0076607,"Chaperone DnaJ-domain superfamily protein.","AT2G31300","ARPC1B",27.522,1.401,0.42754,3.2768,0.00105,3.0515E-3,"full_name=actin-related protein C1B. actin-related protein C1B. putative ARP2/3 protein complex subunit p41"]
[{"$nulls":18},"AT4G30110","HMA2",18.793,-1.4907,0.49461,-3.0138,0.0025801,0.0077517,"full_name=heavy metal atpase 2. heavy metal atpase 2. encodes a protein similar to Zn-ATPase, a P1B-type ATPases transport zinc","AT4G29800","PLP8",8.1457,-3.5967,1.0983,-3.2748,0.0010573,0.00307,"full_name=PATATIN-like protein 8. PATATIN-like protein 8."]
[{"$nulls":18},"AT1G62970","SDJ3",126.26,-0.60513,0.20098,-3.0109,0.002605,0.0078155,"Chaperone DnaJ-domain superfamily protein.","AT4G18590","RPA3B",28.482,-1.2715,0.38854,-3.2724,0.0010664,0.0030925,"Nucleic acid-binding, OB-fold-like protein."]
[{"$nulls":18},"AT5G13120","Pnsl5",179.73,-0.69644,0.23143,-3.0093,0.0026182,0.0078467,"full_name=Photosynthetic NDH subcomplex L 5. cyclophilin 20-2. Encodes a lumenal cyclophilin with peptidyl-prolyl isomerase activity that is associated with the NAD(P)H dehydrogenase complex in stromal regions of the thylakoid membrane. It is likely to be important for the accumulation of the hydrophobic domain of the NAD(P)H dehydrogenase complex. This complex is associated with PSI and is responsible for the reduction of plastoquinone.","AT2G03510",null,379.15,-0.3859,0.11801,-3.27,1.0754E-3,0.0031154,"SPFH/Band 7/PHB domain-containing membrane-associated protein family."]
[{"$nulls":18},"AT4G30960","SIP3",372.49,0.52752,0.17539,3.0077,0.0026326,0.0078824,"full_name=SOS3-interacting protein 3. SOS3-interacting protein 3. Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance.","AT1G03910","CTN",1076.8,0.31373,0.096052,3.2663,0.0010897,0.0031539,"cactus-binding carboxy-terminal, cactin. Encodes the Arabidopsis homolog of a conserved eukaryotic protein without known functional domains. The protein that localizes to nuclear speckles and colocalizes with known splicing proteins."]
[{"$nulls":18},"AT2G47330",null,399.96,0.38264,0.12726,3.0067,0.0026413,0.0079019,"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT1G77670",null,212.61,-0.4877,0.14947,-3.2628,0.0011032,0.0031899,"Pyridoxal phosphate (PLP)-dependent transferases superfamily protein."]
[{"$nulls":18},"AT2G02760","UBC2",560.64,-0.34208,0.11378,-3.0066,0.0026421,0.007903,"full_name=ubiquiting-conjugating enzyme 2. ubiquiting-conjugating enzyme 2. ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene.","AT2G13547",null,25.902,1.5251,0.46741,3.2628,1.1033E-3,0.0031899,"hypothetical protein."]
[{"$nulls":18},"AT1G76570","LHCB7",159.98,0.60554,0.20166,3.0027,0.0026756,0.0079917,"Chlorophyll A-B binding family protein.","AT2G38680",null,20.909,-1.5963,0.48996,-3.2581,1.1217E-3,0.0032386,"5'-nucleotidase / magnesium ion binding protein."]
[{"$nulls":18},"AT5G18540",null,76.125,0.74685,0.24883,3.0014,2.6871E-3,0.008021,"E3 ubiquitin-protein ligase.","AT5G51050","APC2",38.475,-1.0878,0.33415,-3.2555,1.132E-3,3.2667E-3,"full_name=ATP/phosphate carrier 2. Mitochondrial substrate carrier family protein. Encodes a mitochondrial ATP-Mg/Pi transporter. Binds to calcium."]
[{"$nulls":18},"AT2G17972",null,28.066,1.234,0.4116,2.998,0.0027172,0.0081032,"transmembrane protein.","AT1G52430",null,16.753,1.9013,0.58501,3.2501,0.0011537,0.0033256,"Ubiquitin carboxyl-terminal hydrolase-related protein."]
[{"$nulls":18},"AT5G05450","RH18",142.05,0.54613,0.18243,2.9936,0.0027568,0.0082139,"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT1G07350","SR45a",429.83,0.39764,0.12239,3.2489,0.0011586,0.0033364,"full_name=serine/arginine rich-like protein 45a. RNA-binding (RRM/RBD/RNP motifs) family protein. Encodes a serine/arginine rich-like protein, SR45a. Involved in the regulation of stress-responsive alternative splicing."]
[{"$nulls":18},"AT1G43650","UMAMIT22",436.91,-0.5353,0.17903,-2.99,0.0027899,0.0083038,"full_name=Usually multiple acids move in and out Transporters 22. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT5G13750","ZIFL1",87.266,0.91711,0.28264,3.2448,1.1753E-3,0.0033814,"full_name=zinc induced facilitator-like 1. zinc induced facilitator-like 1."]
[{"$nulls":18},"AT3G22600","LTPG5",144.46,-0.69798,0.23347,-2.9896,0.0027938,0.0083081,"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT4G17695","KAN3",11.586,-2.5244,0.77845,-3.2429,0.0011831,0.003401,"full_name=KANADI 3. Homeodomain-like superfamily protein."]
[{"$nulls":18},"AT5G23330",null,136.79,0.58082,0.19453,2.9858,0.0028286,0.0083998,"Nucleotidylyl transferase superfamily protein.","AT5G16880",null,776.23,0.30099,0.092985,3.237,0.001208,0.0034676,"Target of Myb protein 1."]
[{"$nulls":18},"AT3G62120","PRORS-CYT",198.93,-0.50401,0.16897,-2.9829,2.8555E-3,0.0084736,"Class II aaRS and biotin synthetases superfamily protein.","AT1G35160","GF14 PHI",238.57,-0.58116,0.17958,-3.2362,1.2112E-3,3.4743E-3,"full_name=GF14 protein phi chain. GF14 protein phi chain. GF14 protein phi chain member of 14-3-3 protein family. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1"]
[{"$nulls":18},"AT3G17000","UBC32",608.18,0.33455,0.11218,2.9824,0.0028602,0.0084803,"full_name=ubiquitin-conjugating enzyme 32. ubiquitin-conjugating enzyme 32.","AT5G51340","SCC4",451.98,0.43529,0.13457,3.2345,0.0012184,0.0034918,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
[{"$nulls":18},"AT1G63980",null,433.81,0.37938,0.12729,2.9804,0.0028786,0.0085272,"D111/G-patch domain-containing protein.","AT3G51610","NPU",272.96,0.45328,0.14034,3.2298,0.0012387,0.003547,"full_name=NO PRIMEXINE AND PLASMA MEMBRANE UNDULATION. ATP-dependent helicase/deoxyribonuclease subunit B. Encodes a membrane protein NO PRIMEXINE AND PLASMA MEMBRANE UNDULATION (NPU). Involved in primexine deposition and plasma membrane undulation during early pollen wall development."]
[{"$nulls":18},"AT1G79500","AtkdsA1",21.834,-1.3372,0.44919,-2.977,0.0029109,0.0086125,"Aldolase-type TIM barrel family protein. Encodes a protein with 3-deoxy-8-phosphooctulonate synthase (KDOP synthase) activity which is involved in the biosynthesis of KDO, a component of cell wall rhamnogalacturonan II.","AT5G11380","DXPS3",97.825,-0.76675,0.23759,-3.2273,0.0012498,0.003575,"full_name=1-deoxy-D-xylulose 5-phosphate synthase 3. 1-deoxy-D-xylulose 5-phosphate synthase 3. Encodes a protein postulated to have 1-deoxy-D-xylulose 5-phosphate synthase activity."]
[{"$nulls":18},"AT2G22800","HAT9",256.3,-0.50983,0.17142,-2.9742,2.9378E-3,0.0086857,"Homeobox-leucine zipper protein family. Encodes homeobox protein HAT9.","AT1G13245","RTFL17",31.223,-1.242,0.38515,-3.2248,1.2607E-3,3.6029E-3,"full_name=ROTUNDIFOLIA like 17. ROTUNDIFOLIA like 17."]
[{"$nulls":18},"AT5G13430","RISP",290.41,0.43447,0.14617,2.9724,0.002955,0.0087275,"Ubiquinol-cytochrome C reductase iron-sulfur subunit.","AT5G22880","HTB2",227.55,0.5459,0.16941,3.2225,1.271E-3,0.0036286,"full_name=histone B2. histone B2. Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases."]
[{"$nulls":18},"AT2G05590","OXR2",159.36,-0.55712,0.18744,-2.9722,0.0029563,0.0087299,"TLD-domain containing nucleolar protein.","AT1G68370","ARG1",143.22,-0.57973,0.17993,-3.222,0.0012731,0.0036339,"full_name=ALTERED RESPONSE TO GRAVITY 1. Chaperone DnaJ-domain superfamily protein. DnaJ-like protein with homology to coiled coils found in cytoskeleton-interacting proteins."]
[{"$nulls":18},"AT1G59510","CF9",63.476,0.7515,0.25294,2.971,2.9678E-3,0.0087564,"Carbohydrate-binding protein. Encodes CF9.","AT4G17180",null,144.78,0.62524,0.19434,3.2173,1.294E-3,0.0036905,"O-Glycosyl hydrolases family 17 protein."]
[{"$nulls":18},"AT2G37678","FHY1",25.315,-1.2364,0.41654,-2.9681,0.0029961,0.0088305,"full_name=far-red elongated hypocotyl 1. far-red elongated hypocotyl 1. Positive regulator of photomorphogenesis in far-red light. Most abundant in young seedlings in the dark. Downregulated in the light and older as plants develop. Localized in the nucleus and the cytoplasm. Nuclear localization strongest in the dark. Degraded through the 26S proteasome. Regulated by PHYA. It is specifically required for the light-regulated nuclear accumulation of phyA but not phyB.","AT4G14710","ATARD2",1103.4,0.35417,0.11019,3.2142,0.0013079,0.0037262,"RmlC-like cupins superfamily protein."]
[{"$nulls":18},"AT5G60270","LECRK-I.7",10.375,2.0574,0.69363,2.9662,0.0030153,0.0088784,"Concanavalin A-like lectin protein kinase family protein.","AT4G28400",null,45.988,1.0556,0.32857,3.2128,0.0013145,3.7418E-3,"Protein phosphatase 2C family protein."]
[{"$nulls":18},"AT3G44200","NEK6",97.362,-0.67755,0.22863,-2.9635,3.0412E-3,0.0089463,"full_name=NIMA (never in mitosis, gene A)-related 6. serine/threonine-protein kinase NEK5. Encodes AtNek5, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.Interacts physically with plant kinesins ARK1 and ARK2. Mutants show defects in root epidermal cell morphology, trichome branching and other epidermal cell abnormalities suggesting a rol e in epidermal cell differentiation. NEK6 co-localizes with cortical microtubules.","AT4G00860","ATOZI1",118.09,-0.68937,0.21482,-3.2091,1.3315E-3,3.7862E-3,"monopolar spindle protein (DUF1138). putative pathogenesis-related protein whose transcript level is induced in response to ozone and pathogenic Pseudomonas strains."]
[{"$nulls":18},"AT1G08210",null,219.66,0.46832,0.15811,2.9619,0.0030571,0.0089867,"Eukaryotic aspartyl protease family protein.","AT2G38730",null,99.303,-0.68461,0.21354,-3.206,1.346E-3,3.8246E-3,"Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein."]
[{"$nulls":18},"AT2G41700","ABCA1",682.72,-0.39898,0.13484,-2.9589,0.003087,0.0090636,"full_name=ATP-binding cassette A1. ATP-binding cassette A1.","AT3G02620","AAD4",45.669,0.97201,0.30347,3.203,1.3599E-3,0.0038594,"Plant stearoyl-acyl-carrier-protein desaturase family protein."]
[{"$nulls":18},"AT1G32450","NRT1.5",67.644,-0.87016,0.29431,-2.9566,3.1105E-3,0.0091231,"full_name=nitrate transporter 1.5. nitrate transporter 1.5. Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to nitrate. Not involved in nitrate uptake. expressed in root pericycle cells.","AT5G14960","DEL2",56.184,0.96929,0.30317,3.1972,1.3878E-3,0.0039344,"full_name=DP-E2F-like 2. DP-E2F-like 2."]
[{"$nulls":18},"AT1G47580","DYW1",8.2304,-2.6079,0.88305,-2.9532,0.0031445,0.0092149,"full_name=DYW domain protein 1. Pentatricopeptide repeat (PPR) superfamily protein.","AT4G11740","SAY1",445.04,0.41634,0.1303,3.1951,1.3978E-3,0.0039593,"Ubiquitin-like superfamily protein. Isolated as a suppressor of a dominant mutant in the Ara4 gene that was expressed in yeast ypt1 mutant strains. A novel protein with a small region of similarity to coil-coiled domain of yeast VSP27 protein."]
[{"$nulls":18},"AT3G46770",null,6.8645,-3.153,1.0683,-2.9514,3.1638E-3,0.0092634,"AP2/B3-like transcriptional factor family protein.","AT3G52640","NCT",158.2,-0.56075,0.17566,-3.1922,0.001412,0.0039963,"Zn-dependent exopeptidases superfamily protein. Encodes a gamma-secretase subunit. Associates with other subunits in intracellular membrane compartments."]
[{"$nulls":18},"AT5G14250","COP13",211.93,0.45151,0.15311,2.9489,3.189E-3,0.0093274,"full_name=CONSTITUTIVE PHOTOMORPHOGENIC 13. Proteasome component (PCI) domain protein. Encodes subunit 3 of the COP9 signalosome.","AT4G36150",null,20.365,1.5086,0.47312,3.1886,0.0014297,0.004042,"Disease resistance protein (TIR-NBS-LRR class) family."]
[{"$nulls":18},"AT3G62950","GRXC11",13.188,-1.9151,0.65021,-2.9453,0.0032268,0.0094315,"Thioredoxin superfamily protein.","AT5G45360","SKIP31",766.62,0.32019,0.10047,3.187,1.4376E-3,0.0040616,"F-box family protein."]
[{"$nulls":18},"AT1G02000","GAE2",119.25,-0.73985,0.25132,-2.9438,0.003242,0.009471,"full_name=UDP-D-glucuronate 4-epimerase 2. UDP-D-glucuronate 4-epimerase 2. UDP-D-glucuronate 4-epimerase","AT3G06730","TRX z",131.29,0.60597,0.19032,3.184,0.0014527,0.0041022,"full_name=Thioredoxin z. Thioredoxin z. Encodes a plastidial thioredoxin (TRX) isoform that defines a branch of plastidial TRXs lying between x- and y-type TRXs and thus was named TRX z. Possesses disulfide reductase activity in vitro. TRX z was previously named as Trx p (thioredoxin putative and plastidic) before its thioredoxin activity was confirmed (Meng et al., PNAS 2010, 107:3900). Knockout mutant of TRX z has a severe albino phenotype and is inhibited in chloroplast development. Two fructokinase-like proteins (FLN1 and FLN2), members of the pfkB-carbohydrate kinase family, are potential TRX z targets."]
[{"$nulls":18},"AT2G02910",null,76.045,-0.73798,0.25093,-2.9409,0.0032723,0.0095512,"transmembrane protein (DUF616).","AT5G58020","RTF2",338.48,-0.47973,0.15082,-3.1808,0.0014687,0.0041438,"RTF2 RING-finger protein."]
[{"$nulls":18},"AT1G11090","MAGL1",72.014,-0.77554,0.26398,-2.9379,0.0033049,0.009638,"alpha/beta-Hydrolases superfamily protein.","AT3G22450",null,19.335,1.5266,0.48046,3.1774,1.4861E-3,0.0041891,"Ribosomal L18p/L5e family protein."]
[{"$nulls":18},"AT3G23870","ENOR3L2",42.348,-1.1317,0.38556,-2.9352,0.0033331,0.0097102,"magnesium transporter NIPA (DUF803).","AT1G73320",null,65.847,0.82823,0.26091,3.1744,0.0015017,0.0042289,"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein."]
[{"$nulls":18},"AT5G64900","PROPEP1",2.8917,-4.8182,1.6426,-2.9333,0.0033538,0.009762,"full_name=precursor of peptide 1. precursor of peptide 1. Encodes a putative 92-aa protein that is the precursor of AtPep1, a 23-aa peptide which activates transcription of the defensive gene defensin (PDF1.2) and activates the synthesis of H2O2, both being components of the innate immune response.","AT5G48240",null,272.53,0.56484,0.17805,3.1723,0.0015123,0.0042549,"Rrp15p protein."]
[{"$nulls":18},"AT4G24060","VDOF1",177.61,-0.66993,0.22873,-2.9289,3.4018E-3,9.8864E-3,"Dof-type zinc finger DNA-binding family protein.","AT1G32928",null,9.8506,-2.4641,0.77848,-3.1652,1.5497E-3,0.0043534,"Avr9/Cf-9 rapidly elicited protein."]
[{"$nulls":18},"AT4G36990","HSF4",129.9,-0.60371,0.20627,-2.9268,0.003425,0.0099489,"full_name=heat shock factor 4. heat shock factor 4. Encodes a protein whose sequence is similar to heat shock factors that regulate the expression of heat shock proteins. Transcript level is increased in response to heat shock. However, overexpression of this gene did not result in the increase of decrease of heat shock proteins.","AT2G36370",null,197.61,0.51009,0.16124,3.1635,0.0015587,0.0043766,"ubiquitin-protein ligase."]
[{"$nulls":27},"AT5G54280","ATM2",131.34,-0.60536,0.19149,-3.1614,1.5703E-3,0.0044052,"full_name=myosin 2. myosin 2. Type VII myosin gene"]
[{"$nulls":27},"AT2G43040","NPG1",7.2336,-3.8707,1.2252,-3.1591,0.0015824,0.0044344,"full_name=no pollen germination 1. tetratricopeptide repeat (TPR)-containing protein. encodes a calmodulin-binding protein that is expressed specifically in pollen and is required for pollen development."]
[{"$nulls":27},"AT4G21190","emb1417",63.336,0.9173,0.29059,3.1567,0.0015958,0.0044683,"full_name=embryo defective 1417. Pentatricopeptide repeat (PPR) superfamily protein."]
[{"$nulls":27},"AT5G58980","ATNCER3",132.57,0.60396,0.19146,3.1544,0.001608,0.0044988,"Neutral/alkaline non-lysosomal ceramidase."]
[{"$nulls":27},"AT2G13370","CHR5",480.59,0.37681,0.11954,3.1521,0.0016211,0.0045308,"full_name=chromatin remodeling 5. chromatin remodeling 5."]
[{"$nulls":27},"AT4G08850","MIK2",43.74,1.0121,0.32122,3.1508,0.001628,4.5477E-3,"Leucine-rich repeat receptor-like protein kinase family protein."]
[{"$nulls":27},"AT3G07020","SGT",323.47,-0.4065,0.12904,-3.1502,0.0016315,0.0045542,"full_name=sterol glucosyltransferase. UDP-Glycosyltransferase superfamily protein. encodes a 3beta-hydroxy sterol UDP-glucosyltransferase. ugt80a2 mutant plants have reduced steryl glycoside and acyl steryl glycoside levels and reduced seed size. ugt80a2/b1 double mutants have normal levels of celluose and normal cold stress tolerance."]
[{"$nulls":27},"AT4G32590",null,36.008,-1.1143,0.35419,-3.146,0.0016552,0.0046165,"2Fe-2S ferredoxin-like superfamily protein."]
[{"$nulls":27},"AT1G04100","IAA10",68.037,-0.94743,0.30128,-3.1447,0.0016625,0.0046323,"full_name=indoleacetic acid-induced protein 10. indoleacetic acid-induced protein 10. Auxin induced gene, IAA10 (IAA10)."]
[{"$nulls":27},"AT4G27640","IMB4",175.79,0.52886,0.16825,3.1433,0.0016704,0.0046502,"ARM repeat superfamily protein."]
[{"$nulls":27},"AT2G03390",null,328.51,0.39099,0.12449,3.1409,1.6845E-3,0.0046856,"uvrB/uvrC motif-containing protein."]
[{"$nulls":27},"AT5G09440","EXL4",5.7926,-4.2268,1.3481,-3.1354,0.0017164,0.0047677,"full_name=EXORDIUM like 4. EXORDIUM like 4."]
[{"$nulls":27},"AT1G72370","P40",2214.1,0.40946,0.13064,3.1343,1.7227E-3,0.0047818,"full_name=40s ribosomal protein SA. 40s ribosomal protein SA. acidic protein associated to 40S ribosomal subunit of ribosomes. Involved in polysome formation during active protein synthesis. Expressed in actively growing tissue."]
[{"$nulls":27},"AT2G34300",null,45.338,1.0404,0.33227,3.1311,0.0017413,0.0048296,"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein."]
[{"$nulls":27},"AT2G32410","AXL",36.407,-1.3678,0.43732,-3.1277,1.7615E-3,0.0048806,"full_name=AXR1-like. AXR1-like protein."]
[{"$nulls":27},"AT5G05130",null,49.685,0.95513,0.30556,3.1258,1.7729E-3,4.908E-3,"DNA/RNA helicase protein."]
[{"$nulls":27},"AT1G07980","NF-YC10",232.38,0.53701,0.17188,3.1243,0.0017822,0.0049295,"full_name=nuclear factor Y, subunit C10. nuclear factor Y, subunit C10."]
[{"$nulls":27},"AT5G44110","ABCI21",8.5387,-2.6875,0.86053,-3.1231,0.0017895,0.0049446,"full_name=ATP-binding cassette A21. P-loop containing nucleoside triphosphate hydrolases superfamily protein. Encodes a member of the NAP subfamily of ABC transporters."]
[{"$nulls":27},"AT3G52020","scpl39",38.275,-1.0661,0.34166,-3.1204,0.001806,0.0049853,"full_name=serine carboxypeptidase-like 39. serine carboxypeptidase-like 39."]
[{"$nulls":27},"AT1G32550","FdC2",150.82,0.72338,0.23184,3.1202,0.0018071,0.0049875,"full_name=ferredoxin C 2. 2Fe-2S ferredoxin-like superfamily protein. Encodes FdC2, a ferredoxin protein capable of alternative electron partitioning. FdC1 level increases in conditions of acceptor limitation at PSI."]
[{"$nulls":27},"AT1G11410",null,81.396,-0.7343,0.23545,-3.1187,1.8165E-3,0.0050091,"S-locus lectin protein kinase family protein."]
[{"$nulls":27},"AT4G04890","PDF2",530.98,-0.42457,0.13624,-3.1163,0.0018313,0.0050457,"full_name=protodermal factor 2. protodermal factor 2. Encodes a homeodomain protein that is expressed in the LI layer of the vegetative, floral and inflorescence meristems. Binds to the L1 box promoter element which is required in some proteins for L1 specific expression."]
[{"$nulls":27},"AT3G15790","MBD11",638.27,-0.44129,0.1417,-3.1143,0.001844,0.0050756,"full_name=methyl-CPG-binding domain 11. methyl-CPG-binding domain 11. Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins."]
[{"$nulls":27},"AT3G27870","ALA8",1620.2,0.46709,0.15007,3.1125,1.8552E-3,0.0051029,"ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein."]
[{"$nulls":27},"AT1G63020","NRPD1A",25.046,-1.4085,0.45324,-3.1077,0.0018857,0.0051808,"full_name=nuclear RNA polymerase D1A. nuclear RNA polymerase D1A. Encodes one of two alternative largest subunits of a putative plant-specific RNA polymerase IV (aka RNA polymerase D). Required for posttranscriptional gene silencing."]
[{"$nulls":27},"AT5G24650","HP30-2",245.98,-0.43611,0.14052,-3.1035,1.9127E-3,0.0052496,"Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein."]
[{"$nulls":27},"AT3G53360",null,38.163,1.1502,0.37111,3.0993,1.9398E-3,0.0053195,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
[{"$nulls":27},"AT2G19900","NADP-ME1",12574,-0.3637,0.11742,-3.0974,0.0019519,0.0053474,"full_name=NADP-malic enzyme 1. NADP-malic enzyme 1. The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals. The enzyme is active in vitro and appears to function as a homohexamer or homooctamer. It is believed to be a cytosolic protein."]
[{"$nulls":27},"AT4G24290",null,371.36,-0.37141,0.12001,-3.0949,0.001969,0.0053895,"MAC/Perforin domain-containing protein."]
[{"$nulls":27},"AT1G71010","FAB1C",252.56,-0.51677,0.16703,-3.0938,1.9762E-3,5.4056E-3,"full_name=FORMS APLOID AND BINUCLEATE CELLS 1C. FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown."]
[{"$nulls":27},"AT1G30450","CCC1",49.348,-0.9587,0.31073,-3.0853,2.0333E-3,0.0055543,"full_name=cation-chloride co-transporter 1. cation-chloride co-transporter 1. member of Cation-chloride co-transporter family"]
[{"$nulls":27},"AT5G05780","RPN8A",310.29,-0.43263,0.14031,-3.0833,0.002047,0.0055871,"full_name=RP non-ATPase subunit 8A. RP non-ATPase subunit 8A. Encodes a putative 26S proteasome subunit RPN8a. The function of RPN8a and other 26S subunits may be required for specifying leaf adaxial identity."]
[{"$nulls":27},"AT4G21215",null,50.092,-0.88207,0.28632,-3.0807,2.065E-3,0.0056316,"transmembrane protein."]
[{"$nulls":27},"AT3G27990",null,223.79,0.46299,0.15031,3.0803,2.0677E-3,0.0056379,". . Unknown gene Unknown gene"]
[{"$nulls":27},"AT1G26620",null,24.398,-1.3862,0.45051,-3.0769,0.0020919,5.6993E-3,"T-box transcription factor, putative (DUF863)."]
[{"$nulls":27},"AT3G08740",null,114.7,0.89178,0.28999,3.0752,0.0021036,0.0057246,"elongation factor P (EF-P) family protein."]
[{"$nulls":27},"AT3G17240","mtLPD2",1156.3,-0.30032,0.097739,-3.0727,0.0021214,0.0057682,"full_name=lipoamide dehydrogenase 2. lipoamide dehydrogenase 2. lipoamide dehydrogenase precursor"]
[{"$nulls":27},"AT1G07645","DSI-1VOC",4735.4,0.30963,0.10082,3.0713,0.0021315,0.0057907,"full_name=dessication-induced 1VOC superfamily protein. dessication-induced 1VOC superfamily protein."]
[{"$nulls":27},"AT3G15280",null,6460.2,-0.36598,0.11927,-3.0685,0.0021514,0.0058391,"hypothetical protein."]
[{"$nulls":27},"AT5G46210","CUL4",1130.7,0.26285,0.085792,3.0638,0.0021853,0.005926,"full_name=cullin4. cullin4. Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1."]
[{"$nulls":27},"AT2G34960","CAT5",107.07,-0.67617,0.22082,-3.0621,0.0021977,0.0059538,"full_name=cationic amino acid transporter 5. cationic amino acid transporter 5. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. Localized to the plasma membrane."]
[{"$nulls":27},"AT2G21940","SK1",263.52,0.47212,0.15427,3.0604,0.0022105,0.0059824,"full_name=shikimate kinase 1. shikimate kinase 1. Encodes a shikimate kinase. Its transcripts appear to be expressed most highly in mature embryos and senescing leaves, and its transcript levels rise during heat stress and recovery. It is believed to be localized to the chloroplast."]
[{"$nulls":27},"AT3G03240",null,105.34,-0.65992,0.21584,-3.0574,0.0022329,6.038E-3,"alpha/beta-Hydrolases superfamily protein."]
[{"$nulls":27},"AT5G20570","RBX1",308.92,-0.45151,0.1478,-3.0549,0.0022517,0.0060827,"full_name=RING-box 1. RING-box 1. Encodes a ring-box 1 like protein and component of the SCF ubiquitinization complex mediating auxin responses. Forms a E3 ubiquitin ligase complex with CUL3A and At1g21780.1 a BTB domain protein."]
[{"$nulls":27},"AT3G16940","CAMTA6",153.81,0.52886,0.17325,3.0526,0.0022687,0.0061237,"calmodulin-binding transcription activator."]
[{"$nulls":27},"AT1G10300","NOG1-2",34.907,-1.2164,0.39861,-3.0515,0.002277,6.1411E-3,"Nucleolar GTP-binding protein."]
[{"$nulls":27},"AT4G38230","CPK26",108.78,-0.61958,0.20308,-3.0509,0.0022812,0.0061505,"full_name=calcium-dependent protein kinase 26. calcium-dependent protein kinase 26. member of Calcium Dependent Protein Kinase"]
[{"$nulls":27},"AT5G20010","RAN-1",583.96,-0.33306,0.10927,-3.048,0.0023037,0.0062068,"full_name=RAS-related nuclear protein-1. RAS-related nuclear protein-1. A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression."]
[{"$nulls":27},"AT3G09630","SAC56",1555.7,0.33317,0.10939,3.0459,0.0023202,0.0062441,"Ribosomal protein L4/L1 family."]
[{"$nulls":27},"AT1G33060","NAC014",319.07,0.41333,0.13582,3.0432,2.3411E-3,0.0062953,"full_name=NAC 014. NAC 014."]
[{"$nulls":27},"AT2G05170","VPS11",311.64,-0.4394,0.14449,-3.041,0.0023576,0.0063343,"full_name=vacuolar protein sorting 11. vacuolar protein sorting 11. Homologous to yeast VPS11. Forms a complex with VCL1 and AtVPS33. Involved in vacuolar biogenesis."]
[{"$nulls":27},"AT1G80620",null,243.24,0.47494,0.15629,3.0388,0.0023748,0.0063725,"S15/NS1, RNA-binding protein."]
[{"$nulls":27},"AT3G30720","QQS",5.5288,-4.1593,1.3689,-3.0384,2.3785E-3,0.0063789,"full_name=QUA-QUINE STARCH. qua-quine starch."]
[{"$nulls":27},"AT4G32610",null,409.75,0.37117,0.12218,3.0379,0.0023825,0.0063865,"copper ion binding protein."]
[{"$nulls":27},"AT1G77890","ATG14A",69.568,-0.98828,0.32556,-3.0357,0.0024001,6.4243E-3,"DNA-directed RNA polymerase II protein."]
[{"$nulls":27},"AT3G09085",null,22.08,-1.3409,0.44202,-3.0336,2.4169E-3,0.006464,"transmembrane protein (DUF962)."]
[{"$nulls":27},"AT5G43260",null,202.51,-0.68759,0.227,-3.0291,2.4529E-3,0.0065539,"chaperone protein dnaJ-like protein."]
[{"$nulls":27},"AT1G73650",null,34.329,-1.1338,0.37461,-3.0265,2.4738E-3,0.0066043,"3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295)."]
[{"$nulls":27},"AT5G20910","AIP2",301.66,-0.46578,0.15405,-3.0236,0.0024979,0.0066631,"full_name=ABI3-interacting protein 2. RING/U-box superfamily protein. Encodes an E3 ligase that can interact with and polyubiquitinate ABI3 in vitro. AIP2 likely negatively regulates ABA signaling by targeting ABI3 for post-translational destruction."]
[{"$nulls":27},"AT5G67580","TRB2",141.08,-0.59905,0.19823,-3.022,0.0025113,0.0066957,"Homeodomain-like/winged-helix DNA-binding family protein. Encodes a telomeric DNA binding protein. In vitro, the protein preferentially binds double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand."]
[{"$nulls":27},"AT1G50380",null,1125.2,-0.29278,0.096927,-3.0206,0.0025224,0.0067209,"Prolyl oligopeptidase family protein."]
[{"$nulls":27},"AT1G15860",null,159.62,-0.50922,0.16872,-3.0182,0.0025429,0.0067687,"defective in cullin neddylation protein (DUF298)."]
[{"$nulls":27},"AT2G18390","TTN5",73.84,0.73173,0.24269,3.0151,0.0025693,0.0068336,"full_name=TITAN 5. ADP-ribosylation factor family protein. Encodes a member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. Mutant has abnormal mitosis and cell cycle control during seed development."]
[{"$nulls":27},"AT5G04180","ACA3",28.271,2.5021,0.83043,3.013,0.0025868,0.0068744,"full_name=alpha carbonic anhydrase 3. alpha carbonic anhydrase 3."]
[{"$nulls":27},"AT1G71970",null,6.4135,-2.9336,0.97454,-3.0102,0.0026107,0.0069312,"hypothetical protein."]
[{"$nulls":27},"AT4G28080","REC2",971.94,-0.29635,0.098635,-3.0045,0.0026598,0.0070535,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
[{"$nulls":27},"AT3G15520",null,17.589,-1.6925,0.56359,-3.0031,0.0026728,0.0070856,"Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein."]
[{"$nulls":27},"AT4G14430","IBR10",202.78,0.52793,0.1758,3.003,2.6733E-3,0.0070856,"full_name=indole-3-butyric acid response 10. indole-3-butyric acid response 10. Encodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation. This enzyme might also be involved in the conversion of indole-3-butyric acid to indole-3-acetic acid via a beta-oxidation-like pathway."]
[{"$nulls":27},"AT4G04910","NSF",139.12,-0.58998,0.19647,-3.003,0.0026736,0.0070856,"full_name=N-ethylmaleimide sensitive factor. AAA-type ATPase family protein. N-ethylmaleimide sensitive factor"]
[{"$nulls":27},"AT1G31470","NFD4",177.39,-0.54215,0.18058,-3.0023,0.0026797,0.0071004,"full_name=NUCLEAR FUSION DEFECTIVE 4. Major facilitator superfamily protein."]
[{"$nulls":27},"AT1G76070",null,38.605,1.1172,0.37223,3.0015,2.6868E-3,0.0071183,"hypothetical protein."]
[{"$nulls":27},"AT1G72710","CKL2",1353.3,0.2459,0.081933,3.0012,0.0026889,0.0071226,"full_name=casein kinase 1-like protein 2. casein kinase 1-like protein 2. Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus."]
[{"$nulls":27},"AT2G46490",null,63.132,-0.77315,0.25764,-3.001,0.0026913,0.0071279,"hypothetical protein."]
[{"$nulls":27},"AT4G05000","VPS28-2",197.14,0.47433,0.15807,3.0007,0.0026938,0.0071332,"Vacuolar protein sorting-associated protein VPS28 family protein."]
[{"$nulls":27},"AT2G05215",null,13.646,1.7458,0.58185,3.0003,0.0026968,0.0071399]
[{"$nulls":27},"AT3G61450","SYP73",15.547,1.7102,0.57001,3.0002,0.0026977,0.0071413,"full_name=syntaxin of plants 73. syntaxin of plants 73. syntaxin of plants 73 (SYP73)"]
[{"$nulls":27},"AT3G14200",null,119.34,-0.65032,0.21678,-2.9999,0.0027008,0.0071482,"Chaperone DnaJ-domain superfamily protein."]
[{"$nulls":27},"AT1G16540","ABA3",490.72,-0.42581,0.14196,-2.9995,2.7044E-3,0.0071568,"full_name=ABA DEFICIENT 3. molybdenum cofactor sulfurase (LOS5) (ABA3). Encodes molybdenum cofactor sulfurase. Involved in Moco biosynthesis. Involved in the conversion of ABA-aldehyde to ABA, the last step of abscisic acid (ABA) biosynthesis. <i>sir</i> loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.N terminal domain is similar to bacterial NifS suggesting a common mechanism for sulphur mobilization and transfer. Also involved in protein import into chloroplasts."]
[{"$nulls":27},"AT1G80460","NHO1",26.548,-1.3103,0.43695,-2.9988,0.0027102,7.1709E-3,"full_name=nonhost resistance to P. s. phaseolicola 1. Actin-like ATPase superfamily protein. Encodes a protein similar to glycerol kinase, which converts glycerol to glycerol 3-phosphate and performs a rate-limiting step in glycerol metabolism. This gene is required for both general and specific resistance against bacteria and fungi. Arabidopsis thaliana glycerol kinase (GLR1) mRNA.Involved in flagellin-induced non-host resistance to Pseudomonas. Coronatine partially suppresses flagellin-induced expression of NHO1."]
[{"$nulls":27},"AT1G58290","HEMA1",7.0929,-3.0651,1.0225,-2.9975,2.7223E-3,0.0072013,"Glutamyl-tRNA reductase family protein. Encodes a protein with glutamyl-tRNA reductase (GluTR) activity, catalyzing the NADPH-dependent reduction of Glu-tRNA(Glu) to glutamate 1-semialdehyde (GSA) with the release of free tRNA(Glu). It is involved in the early steps of chlorophyll biosynthesis."]
[{"$nulls":27},"AT5G60580",null,568.27,-0.37063,0.12365,-2.9974,0.0027226,0.0072013,"RING/U-box superfamily protein."]
[{"$nulls":27},"AT4G16960","SIKIC3",28.354,-1.3738,0.45836,-2.9971,0.0027253,0.0072063,"disease resistance protein (TIR-NBS-LRR class)."]
[{"$nulls":27},"AT1G74000","SS3",7.5337,-2.4324,0.81157,-2.9971,0.0027254,0.0072063,"full_name=strictosidine synthase 3. strictosidine synthase 3. encodes a protein similar to strictosidine synthase, which is involved in the production of monoterpene indole alkaloids. This gene belongs to a family of 13 members in Arabidopsis."]
[{"$nulls":27},"AT4G21770",null,27.612,1.3003,0.43384,2.9971,0.0027259,7.2064E-3,"Pseudouridine synthase family protein."]
[{"$nulls":27},"AT5G62720","ATNITR2;1",60.933,-0.89637,0.29911,-2.9968,0.0027287,0.0072127,"Integral membrane HPP family protein."]
[{"$nulls":27},"AT1G22930",null,2627.2,-0.3745,0.12497,-2.9967,0.0027294,0.0072135,"T-complex protein 11."]
[{"$nulls":27},"AT3G10520","HB2",11.938,2.2806,0.76131,2.9957,0.0027386,0.0072366,"full_name=haemoglobin 2. hemoglobin 2. Encodes a class 2 non-symbiotic hemoglobin. Over-expression of AHb2 in seeds led to a 40% increase in the total fatty acid content of developing and mature seeds in three subsequent generations. This was mainly due to an increase in the poly-unsaturated C18:2 (omega-6) linoleic and C18:3 (omega-3) alpha-linolenic acids."]
[{"$nulls":27},"AT4G35630","PSAT",482.11,0.36608,0.12223,2.995,0.0027444,7.2508E-3,"full_name=phosphoserine aminotransferase. phosphoserine aminotransferase. Encodes a phosphoserine aminotransferase which is involved in serine biosynthesis in the chloroplast which operates via the phosphorylated pathway."]
[{"$nulls":27},"AT2G39360","CVY1",20.465,-1.3559,0.45275,-2.9948,2.7461E-3,0.0072541,"Protein kinase superfamily protein."]
[{"$nulls":27},"AT3G55800","SBPASE",16.584,-1.7675,0.59032,-2.9942,0.0027521,0.0072687,"full_name=sedoheptulose-bisphosphatase. sedoheptulose-bisphosphatase. Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type."]
[{"$nulls":27},"AT3G07610","IBM1",268.39,0.44749,0.14947,2.994,0.0027539,7.2724E-3,"full_name=increase in bonsai methylation 1. Transcription factor jumonji (jmjC) domain-containing protein. IBM1 likely encodes a protein with histone H3mK9 demethylation activity. It may preferentially demethylate H3mK9 at low-copy loci to protect them from silencing by nearby heterochromatin by preventing the spread of cytosine methylation. BONSAI (At1g73177) is hypermethylated in ibm1 mutants. ibm1 mutants have morphological defects that become apparent at the F3 generation, including small narrow leaves, arrested flower development, and faulty pollen development. These phenotypes cannot result solely from the BONSAI hypermethylation. Aberrant phenotypes in ibm1 mutants in both DNA methylation and plant development can be suppressed by mutations in the KYP H3K9 methyltransferase or he CMT3 non CG-cytosine methylase."]
[{"$nulls":27},"AT1G71350",null,587.27,0.34238,0.11436,2.9939,2.7545E-3,0.0072726,"eukaryotic translation initiation factor SUI1 family protein."]
[{"$nulls":27},"ATCG00340","PSAB",48.747,-1.2038,0.40218,-2.9932,0.0027603,0.007286,"Photosystem I, PsaA/PsaB protein. Encodes the D1 subunit of photosystem I reaction center."]
[{"$nulls":27},"AT3G02840",null,5.4168,-5.0611,1.6909,-2.9932,0.0027605,0.007286,"ARM repeat superfamily protein."]
[{"$nulls":27},"AT3G13040","GAMMAMYB2",31.4,-1.1294,0.37733,-2.9932,0.0027609,0.007286,"myb-like HTH transcriptional regulator family protein."]
[{"$nulls":27},"AT1G21650","SECA2",321.47,0.45507,0.15207,2.9926,0.0027661,0.0072988,"Preprotein translocase SecA family protein. Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality."]
[{"$nulls":27},"AT5G10350","RRM",368.63,0.4909,0.16405,2.9925,2.7672E-3,7.3003E-3,"RNA-binding (RRM/RBD/RNP motifs) family protein."]
[{"$nulls":27},"AT3G07510",null,12.275,-1.8571,0.62066,-2.9922,0.0027697,0.0073059,"maternal effect embryo arrest protein."]
[{"$nulls":27},"AT1G28685",null,45.38,0.93879,0.31376,2.9921,2.7705E-3,0.0073067,"Natural antisense transcript overlaps with AT1G28680. Potential natural antisense gene, locus overlaps with AT1G28680"]
[{"$nulls":27},"AT3G55350",null,17.227,-1.5984,0.53442,-2.9909,2.7816E-3,0.0073349,"PIF / Ping-Pong family of plant transposase."]
[{"$nulls":27},"AT1G54350","ABCD2",154.41,0.55118,0.18431,2.9905,0.0027849,0.0073424,"full_name=ATP-binding cassette D2. ABC transporter family protein."]
[{"$nulls":27},"AT5G02670",null,32.287,1.0861,0.36319,2.9905,0.0027855,0.0073426,"hypothetical protein."]
[{"$nulls":27},"AT5G07410","PME48",24.125,2.1834,0.73025,2.9899,0.0027903,7.3542E-3,"Pectin lyase-like superfamily protein. Encodes a pectin methylesterase implicated in the remodeling of pectins in pollen. Its expression is restricted to the male gametophyte (dry pollen, imbibed pollen and pollen tube). Mutants do not display any phenotype in the vegetative tissues. Pollen germination of KO mutant is strongly delayed in vivo and in vitro. Extra calcium restores the wild type phenotype in vitro."]
[{"$nulls":27},"AT1G11780",null,87.641,-0.74287,0.2485,-2.9894,2.7954E-3,0.0073664,"oxidoreductase, 2OG-Fe(II) oxygenase family protein."]
[{"$nulls":27},"AT1G51405",null,8.7047,2.32,0.77617,2.9891,0.0027982,0.0073727,"myosin-like protein."]
[{"$nulls":27},"AT3G20865","AGP40",11.989,2.8357,0.94886,2.9886,0.0028028,0.007383,"full_name=arabinogalactan protein 40. arabinogalactan protein 40. Encodes a putative arabinogalactan-protein (AGP40)."]
[{"$nulls":27},"AT5G53420","CCT101",288.59,-0.69939,0.23402,-2.9886,0.002803,0.007383,"CCT motif family protein."]
[{"$nulls":27},"AT1G68820","PPRT1",125.63,-0.65577,0.21953,-2.9871,2.8162E-3,0.0074166,"Transmembrane Fragile-X-F-associated protein."]
[{"$nulls":27},"AT1G67300",null,778.16,-0.32295,0.10813,-2.9868,2.8195E-3,0.0074239,"Major facilitator superfamily protein."]
[{"$nulls":27},"AT1G26160",null,299.22,0.38576,0.12918,2.9863,0.0028237,0.007434,"Metal-dependent phosphohydrolase."]
[{"$nulls":27},"AT5G19400","SMG7",857.53,-0.37154,0.12445,-2.9855,0.002831,0.0074517,"Telomerase activating protein Est1. Encodes SMG7, a protein that possesses an evolutionarily conserved EST1 domain and exhibits strong homology to human SMG6 (EST1A) and SMG7 (EST1C) proteins. SMG7 plays an evolutionarily conserved role in nonsense-mediated RNA decay (NMD). Required for exit from meiosis. Hypomorphic smg7 alleles render mutant plants sterile by causing an unusual cell-cycle arrest in anaphase II that is characterized by delayed chromosome decondensation and aberrant rearrangement of the meiotic spindle. Disruption of SMG7 causes embryonic lethality."]
[{"$nulls":27},"AT3G24463",null,7.8669,-2.473,0.82839,-2.9853,0.0028332,0.0074564,"nuclear transport factor 2 family protein."]
[{"$nulls":27},"AT2G41250",null,42.984,-1.0649,0.35678,-2.9848,2.8379E-3,0.0074677,"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein."]
[{"$nulls":27},"AT4G27700",null,14.149,-2.2748,0.76218,-2.9846,0.0028397,0.0074712,"Rhodanese/Cell cycle control phosphatase superfamily protein."]
[{"$nulls":27},"AT4G31480","&#946;1-COP",299.06,-0.39777,0.13328,-2.9845,2.8403E-3,0.0074715,"Coatomer, beta subunit."]
[{"$nulls":27},"AT4G03340",null,34.231,-1.0356,0.34701,-2.9844,0.0028416,0.0074737,"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein."]
[{"$nulls":27},"AT1G61850",null,177,-0.48519,0.16262,-2.9836,0.0028485,0.0074907,"phospholipase A I-like protein. Encodes a non-specific lipase that hydrolyzes phospholipids as well as galactolipids, at both sn-1 and sn-2 positions. Involved in basal jasmonic acid biosynthesis by releasing the precursor fatty acid from membrane lipids. Mutant plants were impacted in resistance to fungus B. cinerea."]
[{"$nulls":27},"AT1G34300",null,202.12,0.47246,0.15846,2.9816,0.0028675,0.0075395,"lectin protein kinase family protein."]
[{"$nulls":27},"AT5G18250",null,354.51,-0.39781,0.13343,-2.9814,0.0028696,0.0075437,"transmembrane protein."]
[{"$nulls":27},"AT1G13160",null,158.78,-0.50745,0.17024,-2.9808,0.0028746,7.5556E-3,"ARM repeat superfamily protein."]
[{"$nulls":27},"AT4G35100","PIP3",17.9,-1.4808,0.49704,-2.9793,0.0028889,0.0075919,"full_name=plasma membrane intrinsic protein 3. plasma membrane intrinsic protein 3. a member of the plasma membrane intrinsic protein PIP. functions as aquaporin. Salt-stress-inducible MIP"]
[{"$nulls":27},"AT3G12915",null,37.786,1.0449,0.35087,2.978,0.002901,0.0076226,"Ribosomal protein S5/Elongation factor G/III/V family protein."]
[{"$nulls":27},"AT4G15770",null,301.13,0.41597,0.13969,2.9778,0.0029036,0.0076281,"RNA binding protein."]
[{"$nulls":27},"AT5G52410",null,64.804,-0.79298,0.26631,-2.9777,2.9045E-3,0.0076294,"oxidoreductase/transition metal ion-binding protein."]
[{"$nulls":27},"AT1G70140","FH8",296.38,-0.40643,0.13653,-2.9768,2.9126E-3,0.0076493,"full_name=formin 8. formin 8. Encodes a group I formin. Binds to F-actin barbed ends. Has severing actin filaments activity. Binds profilin. Involved in the initiation and tip growth of root hairs through regulation of actin cytoskeleton."]
[{"$nulls":27},"AT5G63990",null,7.1817,-3.1008,1.0418,-2.9763,0.0029178,7.6609E-3,"Inositol monophosphatase family protein."]
[{"$nulls":27},"AT3G16840",null,377.29,0.36295,0.12195,2.9763,0.0029179,7.6609E-3,"P-loop containing nucleoside triphosphate hydrolases superfamily protein."]
[{"$nulls":27},"AT1G52320",null,305.61,0.39005,0.13106,2.9762,0.0029186,0.0076615,"kinesin-like protein."]
[{"$nulls":27},"AT5G55700","BAM4",218.07,0.50051,0.16818,2.9761,0.0029194,0.0076623,"full_name=beta-amylase 4. beta-amylase 4. In vitro assay indicates no beta-amylase activity of BAM4. However mutation in BAM4 impairs starch breakdown. BAM4 may play a regulatory role."]
[{"$nulls":27},"AT5G13250",null,5.3254,-4.1332,1.389,-2.9757,0.0029228,0.00767,"RING finger protein."]
[{"$nulls":27},"AT1G77490","TAPX",6.833,-3.4165,1.1483,-2.9754,0.0029263,0.0076779,"full_name=thylakoidal ascorbate peroxidase. thylakoidal ascorbate peroxidase. Encodes a chloroplastic thylakoid ascorbate peroxidase tAPX. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms."]
[{"$nulls":27},"AT4G02600","MLO1",72.921,0.72249,0.24284,2.9752,2.9275E-3,0.00768,"Seven transmembrane MLO family protein. A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO1 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and in papillae, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s)."]
[{"$nulls":27},"AT2G42430","LBD16",37.075,-1.1039,0.37116,-2.9742,0.0029377,0.0077054,"full_name=lateral organ boundaries-domain 16. lateral organ boundaries-domain 16. LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE)."]
[{"$nulls":27},"AT2G42740","RPL16A",89.886,0.65959,0.2218,2.9738,0.0029414,0.0077138,"full_name=ribosomal protein large subunit 16A. ribosomal protein large subunit 16A. encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment."]
[{"$nulls":27},"AT3G53020","STV1",1229.8,0.4246,0.14278,2.9737,0.002942,0.0077141,"full_name=SHORT VALVE1. Ribosomal protein L24e family protein. RPL24B encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B. Mutants showed defects in apical-basal gynoecium patterning similar to previously described ett and mp mutants. Transformation of stv1-1 mutant with a uORF-eliminated ETT construct partially suppressed the stv1 gynoecium phenotype, implying that STV1 could influence ETT translation through its uORFs. Regulated by TCP20."]
[{"$nulls":27},"AT1G73200",null,99.549,-0.76488,0.25722,-2.9736,0.0029428,0.0077151,"testis-expressed sequence 2-like protein (DUF2404)."]
[{"$nulls":27},"AT5G35730",null,63.4,-0.7947,0.26726,-2.9736,0.0029436,0.0077158,"EXS (ERD1/XPR1/SYG1) family protein."]
[{"$nulls":27},"AT3G59580","NLP9",407.85,0.45865,0.15425,2.9734,0.0029449,0.0077181,"Plant regulator RWP-RK family protein."]
[{"$nulls":27},"AT1G13320","PP2AA3",267.49,-0.39866,0.13412,-2.9724,0.0029549,0.0077431,"full_name=protein phosphatase 2A subunit A3. protein phosphatase 2A subunit A3. one of three genes encoding the 65 kDa regulatory subunit of protein phosphatase 2A (PP2A)"]
[{"$nulls":27},"AT5G63260",null,256.01,-0.43863,0.14758,-2.9721,0.0029577,0.0077492,"Zinc finger C-x8-C-x5-C-x3-H type family protein."]
[{"$nulls":27},"AT5G44000",null,422.37,0.37505,0.12621,2.9718,2.9608E-3,0.0077561,"Glutathione S-transferase family protein."]
[{"$nulls":27},"AT3G04400","emb2171",1558.9,0.45687,0.15375,2.9715,0.0029639,0.0077629,"full_name=embryo defective 2171. Ribosomal protein L14p/L23e family protein."]
[{"$nulls":27},"AT3G15130",null,35.862,1.0594,0.35667,2.9703,0.0029752,0.0077911,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
[{"$nulls":27},"AT2G46830","CCA1",25.234,-1.3251,0.44614,-2.97,0.0029779,0.0077971,"full_name=circadian clock associated 1. circadian clock associated 1. Encodes a transcriptional repressor that performs overlapping functions with LHY in a regulatory feedback loop that is closely associated with the circadian oscillator of Arabidopsis. Binds to the evening element in the promoter of TOC1 and represses TOC1 transcription. CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis."]
[{"$nulls":27},"AT2G18250","COAD",211.13,0.46569,0.1568,2.9699,0.002979,0.0077987,"full_name=4-phosphopantetheine adenylyltransferase. 4-phosphopantetheine adenylyltransferase. At2g18250 encodes pantetheine-phosphate adenylyltransferase catalyzing the formation of dephospho-CoA from pantetheine 4'-phosphate. The enzyme is involved in coenzyme A biosynthesis."]
[{"$nulls":27},"AT5G17210",null,178.42,-0.48198,0.1623,-2.9697,2.9808E-3,0.0078022,"transmembrane protein, putative (DUF1218)."]
[{"$nulls":27},"AT1G20030",null,35.323,-1.0866,0.36589,-2.9697,0.0029813,0.0078023,"Pathogenesis-related thaumatin superfamily protein."]
[{"$nulls":27},"AT1G63780","IMP4",237.13,0.48024,0.16175,2.969,0.0029879,0.0078182,"Ribosomal RNA processing Brix domain protein. Small nucleolar ribonucleoprotein protein involved in ribosomal RNA processing. Located in nucleolus and cajal bodies."]
[{"$nulls":27},"AT3G57650","LPAT2",128.87,-0.63842,0.21508,-2.9682,0.0029953,0.0078365,"full_name=lysophosphatidyl acyltransferase 2. lysophosphatidyl acyltransferase 2. Encodes an endoplasmic reticulum localized protein with lysophosphatidyl acyltransferase activity."]
[{"$nulls":27},"AT5G44100","ckl7",423.39,-0.3379,0.11386,-2.9676,0.0030017,0.0078516,"full_name=casein kinase I-like 7. casein kinase I-like 7."]
[{"$nulls":27},"AT1G22660",null,105.98,0.61792,0.20823,2.9675,0.0030021,0.0078516,"Polynucleotide adenylyltransferase family protein."]
[{"$nulls":27},"AT1G74790",null,121.75,-0.58161,0.19603,-2.9669,0.0030078,0.0078653,"catalytics."]
[{"$nulls":27},"AT3G28790",null,8.763,3.494,1.1777,2.9668,3.009E-3,0.007867,"transmembrane protein, putative (DUF1216)."]
[{"$nulls":27},"AT4G22050",null,5.474,-4.1469,1.3979,-2.9665,0.003012,0.0078738,"Eukaryotic aspartyl protease family protein."]
[{"$nulls":27},"AT5G15320",null,75.674,-0.73848,0.24895,-2.9663,0.003014,0.0078776,"ATP synthase E chain."]
[{"$nulls":27},"AT4G28330",null,61.598,-0.78822,0.26575,-2.9661,3.0163E-3,0.0078823,"pyrroline-5-carboxylate reductase."]
[{"$nulls":27},"AT5G53860","emb2737",196.61,0.48067,0.16207,2.9659,0.0030183,7.8864E-3,"full_name=embryo defective 2737. embryo defective 2737. A locus involved in embryogenesis. Mutations in this locus result in embryo lethality."]
[{"$nulls":27},"AT1G03650",null,21.273,1.4208,0.47907,2.9657,3.0201E-3,0.0078897,"Acyl-CoA N-acyltransferases (NAT) superfamily protein."]
[{"$nulls":27},"AT5G55630","KCO1",100.96,-0.63034,0.21256,-2.9654,0.0030224,0.0078946,"full_name=TWO PORE K CHANNEL. Outward rectifying potassium channel protein. Encodes AtTPK1 (KCO1), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK1 is targeted to the vacuolar membrane. Forms homomeric ion channels in vivo. Voltage-independent and Ca2+-activated K+ channel. Activated by 14-3-3 proteins."]
[{"$nulls":27},"AT5G38460",null,78.303,-0.76104,0.25672,-2.9645,3.032E-3,0.0079184,"ALG6, ALG8 glycosyltransferase family."]
[{"$nulls":27},"AT5G28690",null,13.096,3.2982,1.1127,2.9641,0.0030357,0.0079267,"carboxylate clamp-TPR protein (DUF1685)."]
[{"$nulls":27},"AT3G30300",null,30.921,1.1415,0.38516,2.9636,0.0030405,0.007938,"O-fucosyltransferase family protein."]
[{"$nulls":27},"AT3G16280","ERF036",8.0259,-2.5259,0.85231,-2.9636,0.003041,0.0079382,"Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY."]
[{"$nulls":27},"AT5G19740","LAMP1",19.801,2.2338,0.75394,2.9628,0.0030481,0.0079553,"Peptidase M28 family protein."]
[{"$nulls":27},"AT3G16870","GATA17",18.238,1.4964,0.50507,2.9628,0.0030489,0.0079563,"full_name=GATA transcription factor 17. GATA transcription factor 17. Encodes a member of the GATA factor family of zinc finger transcription factors."]
[{"$nulls":27},"AT1G69587",null,24.579,1.5256,0.51503,2.9621,0.0030552,0.0079712,"Natural antisense transcript overlaps with AT1G69588. Potential natural antisense gene, locus overlaps with AT1G69588 Natural antisense transcript overlaps with AT1G69588"]
[{"$nulls":27},"AT4G27852",null,21.99,1.4203,0.47953,2.9619,0.0030575,0.0079762,"Natural antisense transcript overlaps with AT4G27850 and AT4G27860. Potential natural antisense gene, locus overlaps with AT4G27850 and AT4G27860 Natural antisense transcript overlaps with AT4G27850 and AT4G27860"]
[{"$nulls":27},"AT3G13450","DIN4",9.6106,3.1235,1.0546,2.9617,0.0030598,0.0079807,"full_name=DARK INDUCIBLE 4. Transketolase family protein. branched chain alpha-keto acid dehydrogenase E1 beta"]
[{"$nulls":27},"AT4G31450","CTL09",181.12,0.49804,0.16818,2.9615,0.0030618,0.0079846,"RING/U-box superfamily protein."]
[{"$nulls":27},"AT3G55610","P5CS2",1200,-0.27715,0.093587,-2.9614,0.0030622,0.0079846,"full_name=delta 1-pyrroline-5-carboxylate synthase 2. delta 1-pyrroline-5-carboxylate synthase 2. encodes delta 1-pyrroline-5-carboxylate synthetase B. Gene expression is induced by dehydration, high salt and ABA. Knock-out mutations in P5CS2 are embryo-lethal. P5CS2 appears to be present in different cells and/or different subcellular locations from P5CS1 in a tissue-dependent manner. Mutants are defective in pollen development."]
[{"$nulls":27},"AT4G27654",null,5.9116,-3.6278,1.2252,-2.9611,3.0658E-3,0.0079926,"transmembrane protein."]
[{"$nulls":27},"AT5G01460",null,150.54,-0.59055,0.19945,-2.9608,0.0030681,0.0079975,"LMBR1-like membrane protein."]
[{"$nulls":27},"AT4G17960",null,37.974,-0.99482,0.33602,-2.9606,0.0030702,0.0080015,"phospholipid hydroperoxide glutathione peroxidase."]
[{"$nulls":27},"AT3G43540",null,99.651,0.66384,0.22426,2.9601,0.0030756,0.0080144,"initiation factor 4F subunit (DUF1350)."]
[{"$nulls":27},"AT3G15810",null,16.21,-1.7231,0.58225,-2.9594,0.0030823,0.0080305,"LURP-one-like protein (DUF567)."]
[{"$nulls":27},"AT4G32580",null,18.961,-2.1191,0.71614,-2.959,0.0030866,0.0080404,"Thioredoxin superfamily protein."]
[{"$nulls":27},"AT2G01510",null,45.526,0.95734,0.32355,2.9589,0.0030877,0.0080419,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
[{"$nulls":27},"AT2G18040","PIN1AT",160.85,-0.49864,0.16853,-2.9588,0.0030882,0.0080421,"full_name=peptidylprolyl cis/trans isomerase, NIMA-interacting 1. peptidylprolyl cis/trans isomerase, NIMA-interacting 1. phosphorylation-specific peptidyl prolyl cis/trans isomerase (PPIase) with specificity for phosphoserine-proline bonds"]
[{"$nulls":27},"AT1G47740",null,69.516,-0.73689,0.24919,-2.9572,0.0031045,0.0080832,"PPPDE putative thiol peptidase family protein."]
[{"$nulls":27},"AT1G18740","B1L",53.302,-1.4592,0.4935,-2.9568,0.0031089,0.0080933,"ROH1, putative (DUF793)."]
[{"$nulls":27},"AT5G19680",null,154.4,-0.53081,0.17953,-2.9567,0.0031099,0.0080947,"Leucine-rich repeat (LRR) family protein."]
[{"$nulls":27},"AT2G18340",null,898.17,0.43229,0.14623,2.9561,3.1151E-3,0.008107,"late embryogenesis abundant domain-containing protein / LEA domain-containing protein."]
[{"$nulls":27},"AT4G25290",null,33.923,-1.21,0.40937,-2.9558,0.0031182,0.0081138,"DNA photolyase."]
[{"$nulls":27},"AT4G13630","MYOB13",367.55,0.42932,0.14525,2.9557,3.1197E-3,0.0081164,"zein-binding protein (Protein of unknown function, DUF593)."]
[{"$nulls":27},"AT5G58210",null,651.71,0.32527,0.11005,2.9556,0.0031209,0.0081182,"hydroxyproline-rich glycoprotein family protein."]
[{"$nulls":27},"AT1G48210",null,147.72,-0.56102,0.18983,-2.9553,3.1235E-3,0.0081235,"Protein kinase superfamily protein."]
[{"$nulls":27},"AT5G10840","EMP1",65.698,-0.9615,0.32538,-2.955,0.0031268,0.0081309,"full_name=endomembrane protein 1. Endomembrane protein 70 protein family."]
[{"$nulls":27},"AT4G02690","LFG3",2046.8,0.39121,0.13242,2.9544,0.003133,0.0081458,"Bax inhibitor-1 family protein."]
[{"$nulls":27},"AT2G43500","NLP8",1855.5,0.33933,0.11487,2.954,0.0031371,0.008155,"Plant regulator RWP-RK family protein."]
[{"$nulls":27},"AT2G42010","PLDBETA1",216.13,-0.46683,0.15804,-2.9539,0.0031379,0.008156,"full_name=phospholipase D beta 1. phospholipase D beta 1. phospholipase D (PLDbeta)"]
[{"$nulls":27},"AT1G58235",null,331.47,0.45229,0.15314,2.9534,0.0031426,0.0081667,"hypothetical protein."]
[{"$nulls":27},"AT2G45840",null,3.1835,-5.2642,1.7829,-2.9526,0.0031513,0.0081882,"O-glucosyltransferase rumi-like protein (DUF821)."]
[{"$nulls":27},"AT1G28270","RALFL4",9.9197,3.3588,1.1376,2.9525,0.0031526,0.0081901,"full_name=ralf-like 4. ralf-like 4. Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide."]
[{"$nulls":27},"AT5G08230","HULK1",224.44,0.42843,0.14511,2.9524,0.0031532,0.0081904,"tudor/PWWP/MBT domain protein. HUA and HUA-LIKE (HULK) genes act redundantly to regulate a subset of essential genes, with some (or all) family members also having specific functions."]
[{"$nulls":27},"AT2G36080","ABS2",55.611,0.99905,0.33843,2.952,0.0031572,0.0081982,"full_name=ABNORMAL SHOOT 2. AP2/B3-like transcriptional factor family protein. Encodes a plant-specific B3 DNA-binding domain transcription factor. Has transcription repressor activity."]
[{"$nulls":27},"AT5G66040","STR16",501.03,0.4828,0.16355,2.952,0.0031572,0.0081982,"full_name=sulfurtransferase protein 16. sulfurtransferase protein 16. Encodes a protein with thiosulfate sulfurtransferase/rhodanese activity in vitro, however, it is likely to use a substrate other than thiosulfate or 3-mercaptopyruvate in vivo."]
[{"$nulls":27},"AT5G60450","ARF4",258.01,-0.44334,0.15019,-2.9519,0.003158,0.0081988,"full_name=auxin response factor 4. auxin response factor 4. Encodes a member of the ARF family of transcription factors which mediate auxin responses. ARF4 appears to have redundant function with ETT(ARF3) in specifying abaxial cell identity."]
[{"$nulls":27},"AT1G02790","PGA4",105.95,2.9704,1.0065,2.9513,0.0031645,0.0082144,"full_name=polygalacturonase 4. polygalacturonase 4. encodes a exopolygalacturonase."]
[{"$nulls":27},"AT1G09863",null,59.339,1.4598,0.49465,2.9511,3.1665E-3,0.0082183,"Natural antisense transcript overlaps with AT1G79510. Natural antisense transcript overlaps with AT1G79510"]
[{"$nulls":27},"AT5G44090",null,1134.1,0.44088,0.14948,2.9494,3.1841E-3,0.0082628,"Calcium-binding EF-hand family protein."]
[{"$nulls":27},"AT3G54930",null,11.141,-1.9987,0.67776,-2.9491,3.1874E-3,0.0082701,"Protein phosphatase 2A regulatory B subunit family protein."]
[{"$nulls":27},"AT1G44350","ILL6",366.09,-0.36547,0.12393,-2.9489,3.189E-3,0.0082728,"full_name=IAA-leucine resistant (ILR)-like gene 6. IAA-amino acid hydrolase ILR1-like 6. encodes a protein similar to IAA amino acid conjugate hydrolase."]
[{"$nulls":27},"AT4G39850","ABCD1",1517,0.33362,0.11319,2.9474,3.2044E-3,0.0083116,"full_name=ATP-binding cassette D1. peroxisomal ABC transporter 1. Encodes a peroxisomal protein of the ATP binding cassette (ABC) transporter class (PMP subfamily) with significant identity to the human X-linked adrenoleukodystrophy protein (ALDP). The gene product promotes germination and represses embryo dormancy. ABI3, ABA1, FUS3 and LEC1 are epistatic to this gene. Mutants accumulate fatty acyl CoA suggesting a defect in uptake of fatty acyl CoA into the peroxisome."]
[{"$nulls":27},"AT3G18130","RACK1C_AT",60.579,-0.85036,0.28882,-2.9442,0.0032376,0.0083962,"full_name=receptor for activated C kinase 1C. receptor for activated C kinase 1C. Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1C has no phenotype on its own and probably acts redundantly with RACK1A and RACK1B."]
[{"$nulls":27},"AT1G12990",null,20.415,-1.3943,0.47357,-2.9442,0.0032384,8.397E-3,"beta-1,4-N-acetylglucosaminyltransferase family protein."]
[{"$nulls":27},"AT1G01980","ATBBE1",21.427,2.5383,0.86232,2.9436,3.2442E-3,0.0084106,"FAD-binding Berberine family protein. member of Reticuline oxidase-like family"]
[{"$nulls":27},"AT5G08390","KTN80.3",38.42,-0.97092,0.32985,-2.9435,0.0032448,0.008411,"Transducin/WD40 repeat-like superfamily protein."]
[{"$nulls":27},"AT1G43850","SEU",639.69,0.30549,0.1038,2.9431,0.0032496,0.008422,"full_name=seuss. SEUSS transcriptional co-regulator. Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls."]
[{"$nulls":27},"AT1G03080","NET1D",100.89,-0.65614,0.22298,-2.9426,0.0032551,0.0084351,"full_name=Networked 1D. kinase interacting (KIP1-like) family protein."]
[{"$nulls":27},"AT3G22200","POP2",442.19,0.39777,0.13521,2.9418,0.003263,0.0084542,"full_name=POLLEN-PISTIL INCOMPATIBILITY 2. Pyridoxal phosphate (PLP)-dependent transferases superfamily protein. Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense."]
[{"$nulls":27},"AT4G17100",null,14.232,-1.8763,0.63788,-2.9415,0.0032662,0.0084612,"poly(U)-specific endoribonuclease-B protein."]
[{"$nulls":27},"AT3G27240","CYC1-1",211.68,-0.43965,0.14947,-2.9414,0.0032671,0.0084621,"Cytochrome C1 family."]
[{"$nulls":27},"AT2G33120","SAR1",350.84,-0.39558,0.1345,-2.9411,0.0032707,0.0084701,"full_name=synaptobrevin-related protein 1. synaptobrevin-related protein 1. Encodes a member of Synaptobrevin-like protein family. Also known as VESICLE-ASSOCIATED MEMBRANE PROTEIN 722 (VAMP722). Required for cell plate formation."]
[{"$nulls":27},"AT1G31280","AGO2",392.96,-0.43101,0.14663,-2.9395,0.0032874,0.008512,"full_name=argonaute 2. Argonaute family protein. Encodes Argonaute gene that binds viral siRNAs and is involved in antiviral defense response. Regulates innate immunity."]
[{"$nulls":27},"AT5G42870","PAH2",841.46,0.37029,0.12598,2.9393,0.0032892,0.0085151,"full_name=phosphatidic acid phosphohydrolase 2. phosphatidic acid phosphohydrolase 2. The PAH2 gene encodes a phosphatidate phosphohydrolase. Mutant analysis revealed its involvement in galactolipid synthesis pathway, and the membrane lipid remodeling. The pah1pah2 double-mutant showed enhanced Al-susceptibility under low-P conditions, but there was no significant differences in Al tolerance between pah1pah2 and wild type when they were grown in a solution containing 35 &#956;M Pi."]
[{"$nulls":27},"AT1G21010",null,10.371,-2.0931,0.7122,-2.9389,0.0032938,0.0085238,"poly polymerase."]
[{"$nulls":27},"AT1G30590",null,377.44,0.35374,0.12037,2.9389,0.0032938,0.0085238,"RNA polymerase I specific transcription initiation factor RRN3 protein."]
[{"$nulls":27},"AT5G40645",null,15.448,-1.6474,0.56056,-2.9389,0.0032941,0.0085238,"RPM1-interacting protein 4 (RIN4) family protein."]
[{"$nulls":27},"AT5G66910","NRG1.2",34.382,1.231,0.41888,2.9388,3.2951E-3,0.0085251,"Disease resistance protein (CC-NBS-LRR class) family."]
[{"$nulls":27},"AT2G17730","NIP2",80.064,-0.7158,0.24369,-2.9374,0.0033101,0.0085626,"full_name=NEP-interacting protein 2. NEP-interacting protein 2. Intrinsic thylakoid membrane protein that fixes RPOTmp on the stromal side of the thylakoid membrane."]
[{"$nulls":27},"AT2G13540","ABH1",432.29,0.32812,0.11171,2.9373,0.0033112,0.008564,"full_name=ABA HYPERSENSITIVE 1. ARM repeat superfamily protein. Encodes a nuclear cap-binding protein that forms a heterodimeric complex with CBP20 and is involved in ABA signaling and flowering. Mutants are early flowering and exhibit hypersensitive response to ABA in germination inhibition.Loss of ABH1 function results in abnormal processing of mRNAs for several important floral regulators (FLC, CO, FLM). Analysis of loss of function mutations suggests a role in pri-miRNA processing and mRNA splicing. Note that two different mutant alleles were given the same name abh1-7 (Kuhn et al 2007; Kim et al 2008). To avoid confusion, abh1-7 described in Kim et al (2008) has been renamed abh1-107 (other names: ensalada-1, ens-1)."]
[{"$nulls":27},"AT5G48545","HINT3",22.962,1.7741,0.60401,2.9371,0.0033125,0.0085661,"full_name=histidine triad nucleotide-binding 3. histidine triad nucleotide-binding 3. Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro."]
[{"$nulls":27},"AT1G54920",null,359.37,0.37,0.12599,2.9366,0.0033182,0.0085794,"hypothetical protein."]
[{"$nulls":27},"AT3G51330",null,8.529,2.5524,0.86917,2.9366,0.0033187,0.0085794,"Eukaryotic aspartyl protease family protein."]
[{"$nulls":27},"AT3G58980",null,39.979,-1.0279,0.35023,-2.9348,0.0033378,0.0086275,"F-box family protein."]
[{"$nulls":27},"AT3G23600",null,179.98,-0.46667,0.15906,-2.9339,0.0033476,0.0086514,"alpha/beta-Hydrolases superfamily protein."]
[{"$nulls":27},"AT5G55370","AT2",12.923,1.8401,0.62723,2.9337,0.0033496,0.008655,"MBOAT (membrane bound O-acyl transferase) family protein."]
[{"$nulls":27},"AT2G40850","PI4K GAMMA 1",12.149,3.4755,1.1849,2.9332,0.003355,0.0086667,"full_name=phosphoinositide 4-kinase gamma 1. phosphoinositide 4-kinase gamma 1."]
[{"$nulls":27},"AT3G07940",null,102.58,-0.62168,0.21195,-2.9332,0.0033551,0.0086667,"Calcium-dependent ARF-type GTPase activating protein family."]
[{"$nulls":27},"AT2G37110",null,777.42,-0.37065,0.12637,-2.933,0.0033575,0.0086715,"PLAC8 family protein."]
[{"$nulls":27},"AT2G43790","MPK6",391.87,-0.37079,0.12643,-2.9328,0.0033591,0.0086741,"full_name=MAP kinase 6. MAP kinase 6. Encodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.MPK6 appears to be associated with the microsomal compartment and may be involved in mediating secretory processes."]
[{"$nulls":27},"AT1G80360","VAS1",150.72,-0.51234,0.17477,-2.9314,3.3739E-3,0.0087111,"Pyridoxal phosphate (PLP)-dependent transferases superfamily protein. Encodes a methionine-specific aminotransferase that uses the ethylene biosynthetic intermediate methionine as an amino donor and the auxin biosynthetic intermediate indole-3-pyruvic acid as an amino acceptor to produce L-tryptophan and 2-oxo-4-methylthiobutyric acid. These actions allow VAS1 to coordinate both auxin and ethylene biosynthesis. It functions downstream of TAA1/SAV3 but upstream of YUCs to negatively modulate IAA biosynthesis directly by altering the 3-IPA pool."]
[{"$nulls":27},"AT5G11340","NAA50",108.83,-0.59126,0.20172,-2.9311,0.0033773,0.0087185,"Acyl-CoA N-acyltransferases (NAT) superfamily protein."]
[{"$nulls":27},"AT3G24190",null,392.61,0.3587,0.12242,2.93,0.0033897,0.0087491,"Protein kinase superfamily protein."]
[{"$nulls":27},"AT3G09770","LOG2",710.99,-0.28026,0.095675,-2.9292,3.398E-3,0.0087691,"full_name=LOSS OF GDU 2. RING/U-box superfamily protein. Encodes a ubiquitin E3 ligase LOG2 (LOSS OF GDU2). Required for GLUTAMINE DUMPER1(GDU1)-induced amino secretion."]
[{"$nulls":27},"AT5G15120","PCO1",83.341,-1.2727,0.4346,-2.9283,0.0034081,0.0087938,"2-aminoethanethiol dioxygenase, putative (DUF1637)."]
[{"$nulls":27},"AT2G19580","TET2",69.456,0.82735,0.28264,2.9273,0.0034196,0.0088219,"full_name=tetraspanin2. tetraspanin2. Member of TETRASPANIN family"]
[{"$nulls":27},"AT3G49710",null,38.84,1.1692,0.39951,2.9265,3.4275E-3,0.008841,"Pentatricopeptide repeat (PPR) superfamily protein."]
[{"$nulls":27},"AT2G38840","GBPL2",68.1,-0.79247,0.27083,-2.926,0.0034331,0.008854,"Guanylate-binding family protein."]
[{"$nulls":27},"AT1G23280",null,336.08,0.45147,0.1543,2.926,3.434E-3,8.855E-3,"MAK16 protein-like protein."]
[{"$nulls":27},"AT5G57000",null,43.325,-0.95247,0.32557,-2.9256,0.0034384,0.008865,"DEAD-box ATP-dependent RNA helicase."]
[{"$nulls":27},"AT1G51730",null,221.35,0.45361,0.15507,2.9252,0.0034422,8.8734E-3,"Ubiquitin-conjugating enzyme family protein."]
[{"$nulls":27},"AT1G26470","SNS1",257.67,0.53445,0.18272,2.925,3.4443E-3,0.0088766,"chromatin modification-like protein."]
[{"$nulls":27},"AT1G61360",null,58.771,0.81215,0.27766,2.925,0.0034446,0.0088766,"S-locus lectin protein kinase family protein."]
[{"$nulls":27},"AT4G13270",null,296.66,-0.41008,0.14024,-2.9241,0.0034546,0.008901,"Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family."]
[{"$nulls":27},"AT1G14760","KNATM",127.71,-0.72594,0.24828,-2.9239,0.0034566,0.0089047,"full_name=KNOX Arabidopsis thaliana meinox. KNOX meinox protein. Encodes a novel Arabidopsis KNOX gene that encodes a MEINOX domain but lacks the homeodomain and interacts with TALE-class homeodomain proteins to modulate their activities"]
[{"$nulls":27},"AT2G45560","CYP76C1",842.01,0.64014,0.21901,2.9229,0.0034677,0.008932,"full_name=cytochrome P450, family 76, subfamily C, polypeptide 1. cytochrome P450, family 76, subfamily C, polypeptide 1. cytochrome P450 monooxygenase"]
[{"$nulls":27},"AT4G04850","KEA3",169.4,-0.52502,0.17965,-2.9225,0.0034725,0.0089429,"full_name=K+ efflux antiporter 3. K+ efflux antiporter 3. member of Putative potassium transporter family"]
[{"$nulls":27},"AT2G39830","DAR2",13.717,-2.3402,0.80118,-2.921,0.0034896,0.0089856,"full_name=DA1-related protein 2. DA1-related protein 2. Essential for early phloem development and function, and for root system development."]
[{"$nulls":27},"AT3G26670",null,129.6,-0.60103,0.20579,-2.9206,0.0034937,0.0089947,"magnesium transporter, putative (DUF803)."]
[{"$nulls":27},"AT1G33120",null,1110.2,0.37952,0.12997,2.9202,0.0034986,0.0090059,"Ribosomal protein L6 family."]
[{"$nulls":27},"AT3G11460","MEF10",30.431,1.14,0.3904,2.92,0.0035002,0.0090085,"Pentatricopeptide repeat (PPR) superfamily protein. Encodes a DYW PPR protein that is involved in editing the mitochondrial NAD2 transcript at the site nad2-842."]
[{"$nulls":27},"AT5G25220","KNAT3",155.64,-0.52297,0.17916,-2.919,3.5114E-3,0.0090359,"full_name=KNOTTED1-like homeobox gene 3. homeobox protein knotted-1-like 3. A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia"]
[{"$nulls":27},"AT1G16280","RH36",114.34,0.5757,0.19723,2.9189,3.5128E-3,0.0090382,"full_name=RNA helicase 36. RNA helicase 36. Encodes a putative DEAD-box RNA helicase. Essential for female gametogenesis."]
[{"$nulls":27},"AT1G23400","CAF2",156.26,0.57931,0.19849,2.9186,0.0035166,0.0090466,"RNA-binding CRS1 / YhbY (CRM) domain-containing protein. Promotes the splicing of chloroplast group II introns."]
[{"$nulls":27},"AT5G25360",null,155.38,-0.51429,0.17625,-2.918,0.003523,0.0090616,"hypothetical protein."]
[{"$nulls":27},"AT5G39040","ABCB27",252.4,-0.41697,0.14291,-2.9178,0.0035257,0.009067,"full_name=ATP-binding cassette B27. transporter associated with antigen processing protein 2. Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration."]
[{"$nulls":27},"AT4G38890",null,190.78,0.44925,0.15399,2.9174,3.5293E-3,0.0090748,"FMN-linked oxidoreductases superfamily protein."]
[{"$nulls":27},"AT1G28440","HSL1",52.487,0.90273,0.30955,2.9163,0.0035424,0.0091072,"full_name=HAESA-like 1. HAESA-like 1."]
[{"$nulls":27},"AT5G26770","ATNEAP2",60.193,-0.85808,0.29427,-2.916,0.0035457,0.0091144,"myosin heavy chain, cardiac protein."]
[{"$nulls":27},"AT4G31510",null,425.46,0.37965,0.1302,2.9159,3.5466E-3,0.0091151,"major centromere autoantigen B-like protein."]
[{"$nulls":27},"AT5G03830",null,119.25,0.64985,0.22294,2.9148,3.5588E-3,0.0091449,"CDK inhibitor P21 binding protein."]
[{"$nulls":27},"AT1G58210","EMB1674",68.408,0.76783,0.26345,2.9145,3.5626E-3,0.0091534,"full_name=EMBRYO DEFECTIVE 1674. EMBRYO DEFECTIVE protein. Encodes a member of the NET superfamily of proteins that potentially couples different membranes to the actin cytoskeleton in plant cells. It colocalizes with filamentous actin and is localized to the plasma membrane."]
[{"$nulls":27},"AT5G16220",null,493.85,0.40028,0.13737,2.9139,0.003569,0.0091682,"Octicosapeptide/Phox/Bem1p family protein."]
[{"$nulls":27},"AT1G60610",null,466.7,0.3373,0.11578,2.9134,3.5753E-3,0.0091831,"SBP (S-ribonuclease binding protein) family protein."]
[{"$nulls":27},"AT1G63270","ABCI1",93.882,0.73029,0.25074,2.9126,0.0035849,0.0092063,"full_name=ATP-binding cassette I1. non-intrinsic ABC protein 10. Encodes a member of a heterogenous group of non-intrinsic ATP-binding cassette (ABC) proteins. Members of this group bear no close resemblance to each other nor to representatives of specific ABC protein subfamilies from other organisms. This grouping is arbitrary and will likely change upon acquisition of further data."]
[{"$nulls":27},"AT5G01230","SCS9",87.113,0.65028,0.22328,2.9124,0.0035866,0.0092093,"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein."]
[{"$nulls":27},"AT4G18960","AG",6.0466,-3.5715,1.2265,-2.912,0.0035907,0.0092183,"full_name=AGAMOUS. K-box region and MADS-box transcription factor family protein. Floral homeotic gene encoding a MADS domain transcription factor. Specifies floral meristem and carpel and stamen identity. Binds CArG box sequences. It is the only C function gene. It interacts genetically with the other homeotic genes to specify the floral organs."]
[{"$nulls":27},"AT2G26650","KT1",60.455,-0.81109,0.27857,-2.9116,0.0035954,0.009229,"full_name=K+ transporter 1. K+ transporter 1. Encodes AKT1, a member of the Shaker family inward rectifying potassium channel predominantly expressed in predominantly in root hairs and root endodermis. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500)."]
[{"$nulls":27},"AT4G03150",null,24.387,1.3184,0.45288,2.9111,0.0036019,0.0092442,"plant/protein."]
[{"$nulls":27},"AT1G03905","ABCI19",210.89,-0.52785,0.18136,-2.9106,0.0036077,0.0092575,"full_name=ATP-binding cassette I19. P-loop containing nucleoside triphosphate hydrolases superfamily protein."]
[{"$nulls":27},"AT3G18100","MYB4R1",225.54,0.48867,0.16791,2.9103,0.0036104,0.0092631,"full_name=myb domain protein 4r1. myb domain protein 4r1. Member of the R2R3 transcription factor gene family."]
[{"$nulls":27},"AT5G63470","NF-YC4",7.4493,-2.3878,0.82065,-2.9097,0.0036177,0.0092804,"full_name=nuclear factor Y, subunit C4. nuclear factor Y, subunit C4."]
[{"$nulls":27},"AT1G64430",null,199.61,0.45983,0.15807,2.909,3.6262E-3,0.0093007,"Pentatricopeptide repeat (PPR) superfamily protein."]
[{"$nulls":27},"AT5G05110",null,668.85,0.32151,0.11053,2.9087,3.6297E-3,0.0093081,"Cystatin/monellin family protein."]
[{"$nulls":27},"AT2G46660","CYP78A6",245.47,0.41315,0.14205,2.9086,3.6308E-3,0.0093097,"full_name=cytochrome P450, family 78, subfamily A, polypeptide 6. cytochrome P450, family 78, subfamily A, polypeptide 6. Encodes a member of CYP78A cytochrome P450 monooxygenase protein family that is required in the sporophytic tissue of the mother plant to promote seed growth."]
[{"$nulls":27},"AT5G52970",null,8.7623,2.9272,1.0067,2.9077,0.0036415,9.3355E-3,"thylakoid lumen 15.0 kDa protein."]
[{"$nulls":27},"AT5G02310","PRT6",587.91,-0.35529,0.12223,-2.9067,0.0036525,0.0093622,"full_name=proteolysis 6. proteolysis 6. Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination."]
[{"$nulls":27},"AT5G55240","ATPXG2",13077,-0.26374,0.090757,-2.906,0.0036607,0.0093819,"full_name=ARABIDOPSIS THALIANA PEROXYGENASE 2. PEROXYGENASE 2. Catalyze hydroperoxide-dependent mono-oxygenation reactions. Require calcium for peroxygenase activity. Probably deeply buried in lipid droplets or microsomes."]
[{"$nulls":27},"AT3G01410",null,25.601,-1.1967,0.41194,-2.905,0.0036724,0.0094103,"Polynucleotidyl transferase, ribonuclease H-like superfamily protein."]
[{"$nulls":27},"AT1G09560","GLP5",350.52,-0.46014,0.15842,-2.9045,0.0036786,9.4243E-3,"full_name=germin-like protein 5. germin-like protein 5. Encodes a plasodesmata-located protein involved in regulating primary root growth by controlling phloem-mediated allocation of resources between the primary and lateral root meristems."]
[{"$nulls":27},"AT5G54660",null,10.36,-2.9811,1.0264,-2.9044,3.6795E-3,9.4243E-3,"HSP20-like chaperones superfamily protein."]
[{"$nulls":27},"AT4G39660","AGT2",461.6,0.31992,0.11015,2.9044,0.0036799,9.4243E-3,"full_name=alanine:glyoxylate aminotransferase 2. alanine:glyoxylate aminotransferase 2. alanine:glyoxylate aminotransferase 2 homolog (AGT2) mRNA,"]
[{"$nulls":27},"AT1G07220",null,79.773,0.68485,0.2358,2.9043,0.0036802,9.4243E-3,"O-glucosyltransferase rumi-like protein (DUF821)."]
[{"$nulls":27},"AT1G61570","TIM13",474.42,0.4031,0.13886,2.9029,0.0036973,0.0094667,"full_name=translocase of the inner mitochondrial membrane 13. translocase of the inner mitochondrial membrane 13. Encodes a putative small zinc finger-like protein (TIM13); nucleus-encoded gene whose product is found in the mitochondrial inner membrane space."]
[{"$nulls":27},"AT5G48440",null,11.55,2.2666,0.7809,2.9026,3.7012E-3,0.0094752,"FAD-dependent oxidoreductase family protein."]
[{"$nulls":27},"AT3G48180",null,14.758,-1.6514,0.56897,-2.9025,3.702E-3,0.0094757,"CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase."]
[{"$nulls":27},"AT5G49410",null,53.732,0.82326,0.28366,2.9023,0.0037044,0.0094803,"thiamine-phosphate synthase."]
[{"$nulls":27},"AT3G19840","PRP40C",176.02,0.50727,0.17484,2.9014,0.0037151,0.0095064,"full_name=pre-mRNA-processing protein 40C. pre-mRNA-processing protein 40C. Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries."]
[{"$nulls":27},"AT3G46960","SKI2",227.36,0.46818,0.16137,2.9012,0.0037171,0.00951,"RNA helicase, ATP-dependent, SK12/DOB1 protein. The gene encodes a DExD&#8260;H box RNA helicase, involved in the regulation of K+ deprivation stress response."]
[{"$nulls":27},"AT1G80350","ERH3",97.151,-0.60622,0.20899,-2.9007,3.7231E-3,0.0095239,"full_name=ECTOPIC ROOT HAIR 3. P-loop containing nucleoside triphosphate hydrolases superfamily protein. encodes a p60 katanin protein that is expressed throughout the plant. Required for the specification of cell fates from early in development (in the meristem) through differentiation and for normal postmitotic organization of cortical microtubules into transverse arrays in root epidermis cells. Mutants display cytoskeletal defects."]
[{"$nulls":27},"AT1G68910","WIT2",37.858,-0.99441,0.34289,-2.9001,0.0037302,0.0095405,"full_name=WPP domain-interacting protein 2. WPP domain-interacting protein 2. Encodes one of the WPP domain-interacting proteins (WIT1/AT5G11390, WIT2/AT1G68910) required for RanGAP nuclear envelope association in root tip cells. Ran GTPase plays essential roles in multiple cellular processes, including nucleocytoplasmic transport, spindle formation, and postmitotic nuclear envelope reassembly. The cytoplasmic Ran GTPase activating protein RanGAP is critical to establish a functional RanGTP/RanGDP gradient across the nuclear envelope and is associated with the outer surface of the nuclear envelope in metazoan and higher plant cells. Arabidopsis thaliana RanGAP association with the root tip nuclear envelope requires a family of likely plant-specific nucleoporins combining coiled-coil and transmembrane domains (CC-TMD) and WPP domain-interacting proteins (WIPs). WIT1 and WIT2 have been identified as a second family of CC-TMD proteins, structurally similar, yet clearly distinct from the WIP family, that is required for RanGAP nuclear envelop association in root tip cells."]
[{"$nulls":27},"AT4G39690","MIC60",189.5,-0.47471,0.16371,-2.8997,0.0037355,0.0095526,"MICOS complex subunit."]
[{"$nulls":27},"AT3G16420","PBP1",9.323,2.1798,0.7519,2.899,3.7437E-3,0.0095721,"full_name=PYK10-binding protein 1. PYK10-binding protein 1. The PBP1(PYK10-binding protein 1) assists the PYK10 (beta-glucosidase complex) in its activity and may act like a molecular chaperone that facilitates the correct polymerization of PYK10, when tissues are damaged and subcellular structures are destroyed by pests."]
[{"$nulls":27},"AT5G67440","NPY3",87.408,0.65793,0.227,2.8984,0.0037509,0.0095889,"full_name=NAKED PINS IN YUC MUTANTS 3. Phototropic-responsive NPH3 family protein. A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis."]
[{"$nulls":27},"AT4G32620","EPCR1",534.97,-0.32883,0.1135,-2.8972,3.7651E-3,0.0096236,"Enhancer of polycomb-like transcription factor protein."]
[{"$nulls":27},"AT3G04570","AHL19",32.17,1.0574,0.36509,2.8964,0.0037752,0.009648,"full_name=AT-hook motif nuclear-localized protein 19. AT-hook motif nuclear-localized protein 19."]
[{"$nulls":27},"AT3G21780","UGT71B6",11.393,2.2276,0.76915,2.8962,0.0037777,0.0096528,"full_name=UDP-glucosyl transferase 71B6. UDP-glucosyl transferase 71B6. Encodes a protein with UDP-glucosyl transferase activity that was shown to preferentially glucosylates abscisic acid (ABA), and not its catabolites. Moreover, UGT71B6 was shown to have a strict preference for the naturally-occurring ABA enantiomer, (+)-ABA, and not its 'unnatural' relative, (-)-ABA. This is in contrast to the other identified UGT genes catalyzing the glucosylation of ABA which were shown to accept both stereoisomers as substrates."]
[{"$nulls":27},"AT1G28280","MVQ1",30.987,-1.1113,0.38384,-2.8952,0.0037894,0.0096812,"VQ motif-containing protein."]
[{"$nulls":27},"AT3G28160",null,75.496,-0.79111,0.27333,-2.8944,3.7992E-3,0.0097049,"transposable_element_gene."]
[{"$nulls":27},"AT1G79570",null,346.61,0.3565,0.12318,2.8941,0.003802,0.0097103,"kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein."]
[{"$nulls":27},"AT4G26610","D6PKL1",64.366,-0.76057,0.26281,-2.894,0.0038042,0.0097144,"full_name=D6 protein kinase like 1. D6 protein kinase like 1."]
[{"$nulls":27},"AT3G03810","EDA30",85.519,-0.65438,0.22615,-2.8935,3.8092E-3,0.0097258,"full_name=embryo sac development arrest 30. O-fucosyltransferase family protein."]
[{"$nulls":27},"AT4G26300","emb1027",305.15,-0.37107,0.12826,-2.893,0.0038156,0.0097407,"full_name=embryo defective 1027. Arginyl-tRNA synthetase, class Ic."]
[{"$nulls":27},"AT5G23570","SGS3",38.797,0.99753,0.34486,2.8926,3.8206E-3,0.0097511,"full_name=SUPPRESSOR OF GENE SILENCING 3. XS domain-containing protein / XS zinc finger domain-containing protein-like protein. Required for posttranscriptional gene silencing and natural virus resistance.SGS3 is a member of an 'unknown' protein family. Members of this family have predicted coiled coiled domains suggesting oligomerization and a potential zinc finger domain. Involved in the production of trans-acting siRNAs, through direct or indirect stabilization of cleavage fragments of the primary ta-siRNA transcript. Acts before RDR6 in this pathway."]
[{"$nulls":27},"AT1G73760","CTL14",7.0055,-3.0679,1.0606,-2.8925,3.8214E-3,0.0097511,"RING/U-box superfamily protein."]
[{"$nulls":27},"AT1G20480",null,4.8751,-3.9623,1.3698,-2.8925,0.0038215,0.0097511,"AMP-dependent synthetase and ligase family protein."]
[{"$nulls":27},"AT3G32940",null,152.75,0.51788,0.17906,2.8923,0.0038247,0.0097577,"RNA-binding KH domain-containing protein."]
[{"$nulls":27},"AT5G01220","SQD2",161.58,0.48242,0.16682,2.8918,0.00383,0.0097696,"full_name=sulfoquinovosyldiacylglycerol 2. sulfoquinovosyldiacylglycerol 2. Encodes a UDP-sulfoquinovose:DAG sulfoquinovosyltransferase that is involved in sulfolipid biosynthesis and whose expression is responsive to both phosphate (Pi) and phosphite (Phi) in both roots and shoots."]
[{"$nulls":27},"AT1G11280",null,107.1,-0.73178,0.25316,-2.8906,0.0038448,0.009806,"S-locus lectin protein kinase family protein."]
[{"$nulls":27},"AT5G65120",null,41.019,-0.93247,0.32277,-2.8889,3.8655E-3,9.8572E-3,"DNA-directed RNA polymerase subunit beta."]
[{"$nulls":27},"AT3G11150",null,7.2184,-2.791,0.96619,-2.8887,0.0038686,0.0098636,"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein."]
[{"$nulls":27},"AT5G57460","TML",73.458,-0.7107,0.24607,-2.8882,0.0038744,0.0098767,"muniscin carboxy-terminal mu-like domain protein."]
[{"$nulls":27},"AT5G08275",null,19.407,1.4354,0.49702,2.8881,0.0038763,0.0098801,"Natural antisense transcript overlaps with AT5G55450. Natural antisense transcript overlaps with AT5G55450"]
[{"$nulls":27},"AT1G70510","KNAT2",6.4392,3.3937,1.1755,2.887,0.0038895,0.0099123,"full_name=KNOTTED-like from Arabidopsis thaliana 2. homeobox knotted-like protein. A member of class I knotted1-like homeobox gene family (together with KNAT1). Similar to the knotted1 (kn1) homeobox gene of maize. KNAT2 acts synergistically with cytokinins and antagonistically with ethylene based on ectopic expression studies in different mutant backgrounds and hormone treatments. In addition, KNAT2 is negatively regulated by AS and YABBY genes. KNAT2 is strongly expressed in the shoot apex of seedlings, while in mature plants the gene is primarily expressed in flowers and inflorescence stems."]
[{"$nulls":27},"AT3G16810","PUM24",265.46,0.42259,0.14647,2.8853,0.0039107,0.0099647,"full_name=pumilio 24. pumilio 24. Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts."]

{"sheet":"Supplemental Data Set 2","index":2,"n_rows":4720,"n_cols":45,"rows_kept":2250,"cut":true,"merged":[[2,0,2,8],[2,9,2,17],[2,18,2,26],[2,27,2,35],[2,36,2,44]],"bounds":{"rows_first":1000,"rows_last":250,"rows_between":1000,"halvings":1}}
["Supplemental Data Set 2. Differentially expressed (DE) genes between individual subsequent days after pollination (DAP) for abi3-6. AGI – gene identifier, log2FC – log2 fold- change, stat - statistics, p-adj – false discovery rate adjusted p-value <0.01."]
[]
["DE abi3-6 (round 2 & 3)_16d vs abi3-6 (round 2 & 3)_18d",{"$nulls":8},"DE abi3-6 (round 2 & 3)_18d vs abi3-6 (round 2 & 3)_20d",{"$nulls":8},"DE abi3-6 (round 2 & 3)_20d vs abi3-6 (round 2 & 3)_22d",{"$nulls":8},"DE abi3-6 (round 2 & 3)_22d vs abi3-6 (round 2 & 3)_24d",{"$nulls":8},"DE abi3-6 (round 2 & 3)_24d vs abi3-6 (round 2 & 3)_DS"]
["AGI","gene","baseMean","log2FC","lfcSE","stat","pvalue","padj","description","AGI","gene","baseMean","log2FC","lfcSE","stat","pvalue","padj","description","AGI","gene","baseMean","log2FC","lfcSE","stat","pvalue","padj","description","AGI","gene","baseMean","log2FC","lfcSE","stat","pvalue","padj","description","AGI","gene","baseMean","log2FC","lfcSE","stat","pvalue","padj","description"]
["AT1G56070","LOS1",10799,-4.098,0.091189,-44.94,0,0,"full_name=LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1. Ribosomal protein S5/Elongation factor G/III/V family protein. encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive.","AT4G27160","SESA3",6074.3,-4.6944,0.11303,-41.532,0,0,"full_name=seed storage albumin 3. seed storage albumin 3.","AT5G57560","TCH4",1791.7,3.9663,0.16256,24.399,1.73E-131,{"v":3.2e-127,"d":"3.20E-127"},"full_name=Touch 4. Xyloglucan endotransglucosylase/hydrolase family protein. Encodes a cell wall-modifying enzyme, rapidly upregulated in response to environmental stimuli","AT2G28190","CSD2",1614.9,3.1083,0.18121,17.153,5.93E-66,{"v":1.08e-61,"d":"1.08E-61"},"full_name=copper/zinc superoxide dismutase 2. copper/zinc superoxide dismutase 2. Encodes a chloroplastic copper/zinc superoxide dismutase CSD2 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage. Activation depends totally on CCS. Overexpression of a miR398-resistant form of CSD2 leads to more dramatic improvements in stress (hight light, Cu2+ and methyl viologen) tolerance than overexpression of wild-type CSD2.","AT5G35100",null,208.92,-1.4898,0.18588,-8.0147,{"v":1.1e-15,"d":"1.10E-15"},2.07E-11,"Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein."]
["AT1G77120","ADH1",14556,-2.5738,0.080769,-31.867,{"v":7.67e-223,"d":"7.67E-223"},{"v":7.25e-219,"d":"7.25E-219"},"full_name=alcohol dehydrogenase 1. alcohol dehydrogenase 1. Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.","AT1G56070","LOS1",7119.1,3.8682,0.093642,41.308,0,0,"full_name=LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1. Ribosomal protein S5/Elongation factor G/III/V family protein. encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive.","AT5G37260","RVE2",939.12,4.3031,0.18926,22.737,{"v":1.93e-114,"d":"1.93E-114"},{"v":1.78e-110,"d":"1.78E-110"},"full_name=REVEILLE 2. Homeodomain-like superfamily protein. Encodes a MYB family transcription factor Circadian 1 (CIR1). Involved in circadian regulation in Arabidopsis.","AT1G08830","CSD1",1386.8,2.6239,0.15862,16.542,1.83E-61,1.66E-57,"full_name=copper/zinc superoxide dismutase 1. copper/zinc superoxide dismutase 1. Encodes a cytosolic copper/zinc superoxide dismutase CSD1 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage. Regulated by biotic and abiotic stress. Activation of CSD1 in the cytoplasm involves both a CCS-dependent and -independent pathway.","AT3G07260",null,15.001,7.0206,1.274,5.5107,{"v":3.57e-08,"d":"3.57E-08"},{"v":0.000324,"d":"3.24E-04"},"SMAD/FHA domain-containing protein."]
["AT3G16420","PBP1",4780.3,2.7797,0.10071,27.601,{"v":1.09e-167,"d":"1.09E-167"},{"v":6.84e-164,"d":"6.84E-164"},"full_name=PYK10-binding protein 1. PYK10-binding protein 1. The PBP1(PYK10-binding protein 1) assists the PYK10 (beta-glucosidase complex) in its activity and may act like a molecular chaperone that facilitates the correct polymerization of PYK10, when tissues are damaged and subcellular structures are destroyed by pests.","AT1G03880","CRU2",19792,-4.4716,0.13106,-34.119,{"v":3.83e-255,"d":"3.83E-255"},{"v":2.4E-251,"d":"2.40E-251"},"full_name=cruciferin 2. cruciferin 2. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT5G26000","TGG1",2790.6,2.7881,0.13031,21.396,{"v":1.46e-101,"d":"1.46E-101"},{"v":9.01e-98,"d":"9.01E-98"},"full_name=thioglucoside glucohydrolase 1. thioglucoside glucohydrolase 1. member of Glycoside Hydrolase Family 1. encodes one of two known functional myrosinase enzymes in Arabidopsis. The enzyme catalyzes the hydrolysis of glucosinolates into compounds that are toxic to various microbes and herbivores.","AT1G12520","CCS",677.16,2.3434,0.18402,12.734,{"v":3.82e-37,"d":"3.82E-37"},{"v":2.32e-33,"d":"2.32E-33"},"full_name=copper chaperone for SOD1. copper chaperone for SOD1. Copper-zinc superoxide dismutase copper chaperone (delivers copper to the Cu-Zn superoxide dismutase). Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments. Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta.","AT5G19580",null,66.536,2.3556,0.43262,5.4451,{"v":5.18e-08,"d":"5.18E-08"},{"v":0.000324,"d":"3.24E-04"},"glyoxal oxidase-related protein."]
["AT1G12805",null,3831,-2.7841,0.10164,-27.392,3.42E-165,1.62E-161,"nucleotide binding protein.","AT1G14930",null,3022.8,-5.8436,0.17382,-33.619,{"v":8.81e-248,"d":"8.81E-248"},{"v":4.15e-244,"d":"4.15E-244"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein.","AT4G01026","PYL7",676.18,4.0128,0.2277,17.623,{"v":1.63e-69,"d":"1.63E-69"},7.51E-66,"full_name=PYR1-like 7. PYR1-like 7. Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2. PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of ABI1 and ABI2.","AT5G24380","YSL2",238.94,-3.0799,0.24415,-12.615,1.75E-36,{"v":7.96e-33,"d":"7.96E-33"},"full_name=YELLOW STRIPE like 2. YELLOW STRIPE like 2. closest Arabidopsis homolog of Zea maize metal-phytosiderophore/metal-nicotianamine transporter ZmYS1","AT5G57290","P3B",722.71,0.91492,0.17493,5.2303,{"v":1.69e-07,"d":"1.69E-07"},{"v":0.000793,"d":"7.93E-04"},"60S acidic ribosomal protein family."]
["AT2G43710","SSI2",3984.8,-2.4984,0.096011,-26.021,{"v":2.83e-149,"d":"2.83E-149"},1.07E-145,"full_name=suppressor of SA insensitive 2. Plant stearoyl-acyl-carrier-protein desaturase family protein. Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates.","AT4G27150","SESA2",37104,-3.2559,0.098649,-33.005,{"v":6.93e-239,"d":"6.93E-239"},2.61E-235,"full_name=seed storage albumin 2. seed storage albumin 2.","AT5G64310","AGP1",975.18,3.783,0.21481,17.611,{"v":2.04e-69,"d":"2.04E-69"},{"v":7.54e-66,"d":"7.54E-66"},"full_name=arabinogalactan protein 1. arabinogalactan protein 1. Encodes arabinogalactan-protein (AGP1).","AT4G25100","FSD1",453.68,-4.5345,0.49355,-9.1875,{"v":4.02e-20,"d":"4.02E-20"},{"v":1.46e-16,"d":"1.46E-16"},"full_name=Fe superoxide dismutase 1. Fe superoxide dismutase 1. Fe-superoxide dismutase","AT3G27660","OLEO4",63.9,-1.6528,0.32597,-5.0704,{"v":3.97e-07,"d":"3.97E-07"},1.488E-3,"full_name=oleosin 4. oleosin 4. Encodes oleosin4 (Plant Cell, 2006, 18:1961), a protein found in oil bodies, involved in seed lipid accumulation. Functions in freezing tolerance of seeds. Note: also referred to as OLE3 in Plant Journal 2008, 55:798."]
["AT5G01600","FER1",2629,2.6052,0.10383,25.09,{"v":6.45e-139,"d":"6.45E-139"},2.03E-135,"full_name=ferretin 1. ferretin 1. Encodes a ferretin protein that is targeted to the chloroplast. Member of a Ferritin gene family. Gene expression is induced in response to iron overload and by nitric oxide. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.","AT2G05580",null,10288,-5.4802,0.17018,-32.201,{"v":1.68e-227,"d":"1.68E-227"},{"v":5.28e-224,"d":"5.28E-224"},"Glycine-rich protein family.","AT1G17870","EGY3",472.01,3.7584,0.21584,17.412,{"v":6.65e-68,"d":"6.65E-68"},2.05E-64,"full_name=ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 3. ethylene-dependent gravitropism-deficient and yellow-green-like 3. S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442%E2%80%93454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171%E2%80%93179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria.","AT3G41768",null,100370,0.78826,0.096703,8.1513,{"v":3.6e-16,"d":"3.60E-16"},1.09E-12,"rRNA.","AT3G07850",null,23.217,2.9018,0.58716,4.9421,{"v":7.73e-07,"d":"7.73E-07"},2.362E-3,"Pectin lyase-like superfamily protein."]
["AT3G03270","HRU1",3443.2,-3.2072,0.13119,-24.446,5.51E-132,{"v":1.49e-128,"d":"1.49E-128"},"Adenine nucleotide alpha hydrolases-like superfamily protein.","AT4G28520","CRU3",233160,-3.4295,0.10699,-32.054,1.92E-225,{"v":5.17e-222,"d":"5.17E-222"},"full_name=cruciferin 3. cruciferin 3. Encodes a 12S seed storage protein that is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT1G74310","HSP101",687.69,3.5733,0.2087,17.122,1.02E-65,2.68E-62,"full_name=heat shock protein 101. heat shock protein 101. Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.","AT1G05333",null,74.965,-8.1044,1.0477,-7.7357,{"v":1.03e-14,"d":"1.03E-14"},{"v":2.67e-11,"d":"2.67E-11"},"Natural antisense transcript overlaps with AT1G17810. Natural antisense transcript overlaps with AT1G17810","AT3G13400","sks13",113.11,1.8062,0.36739,4.9163,{"v":8.82e-07,"d":"8.82E-07"},2.362E-3,"full_name=SKU5 similar 13. SKU5 similar 13."]
["AT1G71695",null,4083,-2.3738,0.10062,-23.593,{"v":4.58e-123,"d":"4.58E-123"},{"v":1.08e-119,"d":"1.08E-119"},"Peroxidase superfamily protein.","AT1G14940",null,2931.6,-6.6805,0.21303,-31.359,{"v":7.34e-216,"d":"7.34E-216"},1.73E-212,"Polyketide cyclase/dehydrase and lipid transport superfamily protein.","AT5G15950","SAMDC2",544.13,3.3496,0.19685,17.016,{"v":6.23e-65,"d":"6.23E-65"},1.44E-61,"Adenosylmethionine decarboxylase family protein.","AT2G01010",null,89831,0.78927,0.10299,7.6633,1.81E-14,{"v":4.12e-11,"d":"4.12E-11"},"rRNA.","AT3G28830",null,26.57,3.2258,0.66617,4.8424,{"v":1.28E-6,"d":"1.28E-06"},0.003007,"mucin-like protein, putative (DUF1216)."]
["AT2G29980","FAD3",3707,-2.0722,0.096884,-21.389,{"v":1.7e-101,"d":"1.70E-101"},{"v":3.57e-98,"d":"3.57E-98"},"full_name=fatty acid desaturase 3. fatty acid desaturase 3. Endoplasmic reticulum enzyme responsible for the synthesis of 18:3 fatty acids from phospholipids. Uses cytochrome b5 as electron donor.","AT1G14950",null,2292,-5.745,0.18471,-31.102,{"v":2.26e-212,"d":"2.26E-212"},{"v":4.74e-209,"d":"4.74E-209"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein.","AT5G02020","SIS",1832.5,3.62,0.21289,17.004,{"v":7.68e-65,"d":"7.68E-65"},{"v":1.58e-61,"d":"1.58E-61"},"full_name=Salt Induced Serine rich. E3 ubiquitin-protein ligase RLIM-like protein. Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).","AT4G28790",null,61.099,-2.7895,0.37742,-7.3909,{"v":1.46e-13,"d":"1.46E-13"},{"v":2.95e-10,"d":"2.95E-10"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT4G20690",null,12.201,6.7112,1.3963,4.8065,{"v":1.54e-06,"d":"1.54E-06"},3.199E-3,"hypothetical protein."]
["AT1G66390","MYB90",803.63,3.4642,0.16411,21.109,{"v":6.56e-99,"d":"6.56E-99"},1.24E-95,"full_name=myb domain protein 90. myb domain protein 90. production of anthocyanin pigment 2 protein (PAP2)","AT3G22640","PAP85",7559.6,-4.8211,0.15908,-30.305,{"v":9.76e-202,"d":"9.76E-202"},{"v":1.84e-198,"d":"1.84E-198"},"cupin family protein.","AT1G79245",null,4405,2.4869,0.14726,16.888,{"v":5.53e-64,"d":"5.53E-64"},{"v":1.02e-60,"d":"1.02E-60"},"pseudogene. pseudogene of unknown protein","ATCG00950","RRN23S.1",7891,0.94246,0.12861,7.328,{"v":2.34e-13,"d":"2.34E-13"},{"v":4.11e-10,"d":"4.11E-10"},"full_name=ribosomal RNA23S. rRNA. chloroplast-encoded 23S ribosomal RNA","AT3G62170","VGDH2",26.587,2.7916,0.59957,4.656,{"v":3.22e-06,"d":"3.22E-06"},6.045E-3,"full_name=VANGUARD 1 homolog 2. VANGUARD-like protein."]
["AT1G79690","NUDT3",5029.6,-2.3914,0.11506,-20.784,{"v":5.98e-96,"d":"5.98E-96"},{"v":1.03e-92,"d":"1.03E-92"},"full_name=nudix hydrolase homolog 3. nudix hydrolase homolog 3.","AT5G54190","PORA",1553.6,4.3949,0.15086,29.133,1.39E-186,2.38E-183,"full_name=protochlorophyllide oxidoreductase A. protochlorophyllide oxidoreductase A. light-dependent NADPH:protochlorophyllide oxidoreductase A","AT3G41768",null,47586,1.8812,0.11213,16.778,{"v":3.56e-63,"d":"3.56E-63"},{"v":5.97e-60,"d":"5.97E-60"},"rRNA.","ATCG01180","RRN23S.2",7893.1,0.94188,0.12868,7.3198,2.48E-13,{"v":4.11e-10,"d":"4.11E-10"},"full_name=ribosomal RNA23S. rRNA. chloroplast-encoded 23S ribosomal RNA","AT4G35010","BGAL11",43.734,2.2998,0.50279,4.5742,{"v":4.78E-6,"d":"4.78E-06"},0.008147,"full_name=beta-galactosidase 11. beta-galactosidase 11. putative beta-galactosidase (BGAL11 gene)"]
["AT5G22810",null,1209.8,-3.3704,0.16273,-20.711,2.74E-95,{"v":4.33e-92,"d":"4.33E-92"},"GDSL-like lipase/acylhydrolase superfamily protein.","AT4G25140","OLEO1",4410.9,-5.1273,0.18166,-28.225,{"v":2.88e-175,"d":"2.88E-175"},{"v":4.52e-172,"d":"4.52E-172"},"full_name=oleosin 1. oleosin 1. Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.","AT4G33150","LKR",1229.5,2.6652,0.16419,16.233,{"v":2.95e-59,"d":"2.95E-59"},{"v":4.54e-56,"d":"4.54E-56"},"lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme. Encodes two proteins. One protein is the monofunctional saccharopine dehydrogenase involved in lysine degradation. The longer protein from the same LKR/SDH locus is bifunctional and also has saccharopine dehydrogenase activity. The monofunctional SDH functions mainly to enhance the flux of lysine catabolism. Gene expression is induced by abscisic acid, jasmonate, and under sucrose starvation.","AT1G17820",null,92.189,8.4147,1.3553,6.2085,{"v":5.35e-10,"d":"5.35E-10"},{"v":8.11e-07,"d":"8.11E-07"},"testis-expressed sequence 2-like protein (DUF2404)."]
["AT3G16460","JAL34",2870.1,2.3496,0.11618,20.223,{"v":6.1e-91,"d":"6.10E-91"},{"v":8.88e-88,"d":"8.88E-88"},"full_name=jacalin-related lectin 34. Mannose-binding lectin superfamily protein.","AT2G27380","EPR1",63385,-4.6028,0.16498,-27.9,2.69E-171,{"v":3.9e-168,"d":"3.90E-168"},"full_name=extensin proline-rich 1. extensin proline-rich 1. Encodes an extensin like gene involved in seed germination.","AT3G57520","SIP2",6196.6,2.4416,0.15072,16.2,{"v":5.07e-59,"d":"5.07E-59"},{"v":7.2e-56,"d":"7.20E-56"},"full_name=seed imbibition 2. seed imbibition 2. SIP2 encodes a raffinose-specific alpha-galactosidase that catalyzes the breakdown of raffinose into alpha-galatose and sucrose. This enzyme may function in unloading raffinose from the phloem as part of sink metabolism. Although it was originally predicted to act as a raffinose synthase (RS), that activity was not observed for recombinant SIP2.","AT1G65970","TPX2",31.462,3.6377,0.60825,5.9806,{"v":2.22e-09,"d":"2.22E-09"},{"v":3.11e-06,"d":"3.11E-06"},"full_name=thioredoxin-dependent peroxidase 2. thioredoxin-dependent peroxidase 2. thioredoxin-dependent peroxidase 2"]
["AT3G27770",null,2830.5,-2.2215,0.1099,-20.214,{"v":7.43e-91,"d":"7.43E-91"},{"v":1E-87,"d":"1.00E-87"},"plant/protein.","AT1G18100","E12A11",2560,-4.3149,0.15756,-27.385,{"v":4.12e-165,"d":"4.12E-165"},{"v":5.55e-162,"d":"5.55E-162"},"PEBP (phosphatidylethanolamine-binding protein) family protein. Encodes a member of the FT and TFL1 family of phosphatidylethanolamine-binding proteins. It is expressed in seeds and up-regulated in response to ABA. Loss of function mutants show decreased rate of germination in the presence of ABA. ABA dependent regulation is mediated by both ABI3 and ABI5. ABI5 promotes MFT expression, primarily in the radicle-hypocotyl transition zone and ABI3 suppresses it in the seed.","AT1G27730","STZ",308.14,4.6124,0.29322,15.73,{"v":9.4e-56,"d":"9.40E-56"},{"v":1.24e-52,"d":"1.24E-52"},"full_name=salt tolerance zinc finger. salt tolerance zinc finger. Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.","ATCG00020","PSBA",124.67,2.0902,0.35702,5.8547,{"v":4.78e-09,"d":"4.78E-09"},{"v":6.17e-06,"d":"6.17E-06"},"full_name=photosystem II reaction center protein A. photosystem II reaction center protein A. Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core"]
["AT4G27150","SESA2",249890,-2.2317,0.11109,-20.089,{"v":9.21e-90,"d":"9.21E-90"},1.16E-86,"full_name=seed storage albumin 2. seed storage albumin 2.","AT1G14520","MIOX1",1654.6,-3.404,0.13374,-25.452,{"v":6.69e-143,"d":"6.69E-143"},{"v":8.4e-140,"d":"8.40E-140"},"full_name=myo-inositol oxygenase 1. myo-inositol oxygenase 1. Encodes MIOX1. Belongs to myo-inositol oxygenase gene family.","AT1G54000","GLL22",2028.7,-2.0343,0.12938,-15.724,1.04E-55,1.28E-52,"full_name=GDSL lipase-like protein 22. GDSL-like Lipase/Acylhydrolase superfamily protein.","AT2G46680","HB-7",1807.8,-0.65305,0.11174,-5.8444,{"v":5.08e-09,"d":"5.08E-09"},{"v":6.17e-06,"d":"6.17E-06"},"full_name=homeobox 7. homeobox 7. encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response."]
["AT1G14950",null,18949,-2.4463,0.12355,-19.801,{"v":2.94e-87,"d":"2.94E-87"},{"v":3.47e-84,"d":"3.47E-84"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein.","AT2G02120","PDF2.1",4070.7,-4.7446,0.18742,-25.315,{"v":2.17e-141,"d":"2.17E-141"},{"v":2.55e-138,"d":"2.55E-138"},"Scorpion toxin-like knottin superfamily protein. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","AT2G01010",null,42837,1.8396,0.11869,15.5,3.47E-54,{"v":4.01e-51,"d":"4.01E-51"},"rRNA.","ATMG00020","rrn26",4385.8,0.82947,0.14317,5.7937,{"v":6.89E-9,"d":"6.89E-09"},{"v":7.83e-06,"d":"7.83E-06"}]
["AT5G26260",null,673.82,6.1622,0.31324,19.672,3.73E-86,{"v":4.15e-83,"d":"4.15E-83"},"TRAF-like family protein.","AT5G44120","CRA1",176430,-3.492,0.14089,-24.785,{"v":1.3E-135,"d":"1.30E-135"},{"v":1.45e-132,"d":"1.45E-132"},"full_name=CRUCIFERINA. RmlC-like cupins superfamily protein. Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT1G05340","ATHCYSTM1",324.68,5.6031,0.36306,15.433,{"v":9.82e-54,"d":"9.82E-54"},{"v":1.07e-50,"d":"1.07E-50"},"cysteine-rich TM module stress tolerance protein.","AT3G15640",null,476.47,0.98808,0.1722,5.7381,{"v":9.58e-09,"d":"9.58E-09"},{"v":1.03E-5,"d":"1.03E-05"},"Rubredoxin-like superfamily protein."]
["AT5G21940",null,1230.5,2.2231,0.11511,19.312,{"v":4.28e-83,"d":"4.28E-83"},{"v":4.5e-80,"d":"4.50E-80"},"hybrid signal transduction histidine kinase M-like protein.","AT4G27140","SESA1",1482.5,-3.4614,0.14205,-24.367,{"v":3.87e-131,"d":"3.87E-131"},{"v":4.05e-128,"d":"4.05E-128"},"full_name=seed storage albumin 1. seed storage albumin 1.","AT5G57350","HA3",1210.4,2.2096,0.1442,15.323,{"v":5.34e-53,"d":"5.34E-53"},{"v":5.48e-50,"d":"5.48E-50"},"full_name=H(+)-ATPase 3. H[+]-ATPase 3. member of Plasma membrane H+-ATPase family","ATCG00920","RRN16S.1",3359.9,0.9301,0.16423,5.6635,{"v":1.48E-8,"d":"1.48E-08"},{"v":1.47E-5,"d":"1.47E-05"},"full_name=ribosomal RNA16S. rRNA. chloroplast-encoded 16S ribosomal RNA"]
["AT4G17940",null,6441.7,-2.5367,0.13177,-19.251,{"v":1.38e-82,"d":"1.38E-82"},1.37E-79,"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT5G15230","GASA4",4067.4,4.0717,0.16738,24.327,1.03E-130,{"v":1.02e-127,"d":"1.02E-127"},"full_name=GAST1 protein homolog 4. GAST1 protein homolog 4. Encodes gibberellin-regulated protein GASA4. Promotes GA responses and exhibits redox activity.","AT2G38470","WRKY33",498.76,2.9709,0.19533,15.21,{"v":3.05e-52,"d":"3.05E-52"},{"v":2.96e-49,"d":"2.96E-49"},"full_name=WRKY DNA-binding protein 33. WRKY DNA-binding protein 33. Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress.","ATCG01210","RRN16S.2",3358.7,0.93005,0.16439,5.6575,{"v":1.54e-08,"d":"1.54E-08"},{"v":1.47E-5,"d":"1.47E-05"},"full_name=ribosomal rna 16s. rRNA. chloroplast-encoded 16S ribosomal RNA"]
["AT4G27170","SESA4",2256.3,-3.0335,0.16107,-18.833,{"v":4.05e-79,"d":"4.05E-79"},{"v":3.83e-76,"d":"3.83E-76"},"full_name=seed storage albumin 4. seed storage albumin 4.","AT4G10340","LHCB5",2514.4,2.882,0.1236,23.316,{"v":3.02e-120,"d":"3.02E-120"},2.85E-117,"full_name=light harvesting complex of photosystem II 5. light harvesting complex of photosystem II 5. photosystem II encoding the light-harvesting chlorophyll a/b binding protein CP26 of the antenna system of the photosynthetic apparatus","AT1G77120","ADH1",1298.4,2.5251,0.16612,15.201,{"v":3.49e-52,"d":"3.49E-52"},{"v":3.22e-49,"d":"3.22E-49"},"full_name=alcohol dehydrogenase 1. alcohol dehydrogenase 1. Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.","AT2G01021",null,1033,0.94633,0.17631,5.3675,{"v":7.98E-8,"d":"7.98E-08"},{"v":6.95e-05,"d":"6.95E-05"},"hypothetical protein."]
["AT1G62500","DEG27",1779.2,-3.2437,0.17306,-18.743,{"v":2.21e-78,"d":"2.21E-78"},{"v":1.99e-75,"d":"1.99E-75"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT4G15210","BAM5",2049.6,-3.2819,0.14086,-23.299,{"v":4.58e-120,"d":"4.58E-120"},{"v":4.11e-117,"d":"4.11E-117"},"full_name=beta-amylase 5. beta-amylase 5. cytosolic beta-amylase expressed in rosette leaves and inducible by sugar. RAM1 mutants have reduced beta amylase in leaves and stems.","AT4G27410","RD26",506.13,3.5255,0.23451,15.034,{"v":4.41e-51,"d":"4.41E-51"},{"v":3.88e-48,"d":"3.88E-48"},"full_name=RESPONSIVE TO DESICCATION 26. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.","ATMG01390","rrn18",2214.6,0.87975,0.16393,5.3667,{"v":8.02e-08,"d":"8.02E-08"},{"v":6.95e-05,"d":"6.95E-05"}]
["AT1G03880","CRU2",109670,-1.7799,0.095841,-18.571,{"v":5.5E-77,"d":"5.50E-77"},{"v":4.73e-74,"d":"4.73E-74"},"full_name=cruciferin 2. cruciferin 2. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT5G07010","ST2A",5548,-2.2888,0.099765,-22.942,{"v":1.76e-116,"d":"1.76E-116"},1.51E-113,"full_name=sulfotransferase 2A. sulfotransferase 2A. Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).","AT4G26850","VTC2",1923.5,2.0423,0.13896,14.697,{"v":6.7e-49,"d":"6.70E-49"},{"v":5.62e-46,"d":"5.62E-46"},"full_name=vitamin c defective 2. GDP-L-galactose phosphorylase 1. Encodes a novel protein involved in ascorbate biosynthesis, which was shown to catalyze the transfer of GMP from GDP-galactose to a variety of hexose-1-phosphate acceptors. Recessive mutation has a reduced amount of vitamin C, lower level of non-photochemical quenching, and reduced rate of conversion of violaxanthin to zeaxanthin in high light.","AT1G70850","MLP34",27.435,8.06,1.518,5.3097,{"v":1.1e-07,"d":"1.10E-07"},{"v":9.08e-05,"d":"9.08E-05"},"full_name=MLP-like protein 34. MLP-like protein 34."]
["AT3G25770","AOC2",1151.5,3.4517,0.18853,18.308,7.11E-75,{"v":5.85e-72,"d":"5.85E-72"},"full_name=allene oxide cyclase 2. allene oxide cyclase 2. Encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is induced during senescence, a process that involves jasmonic acid signalling pathway. Note: Nomenclature for Arabidopsis allene oxide cyclase 2 (AOC2, AT3G25770) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC2 (AT3G25770) is also referred to as AOC3 in He et al. 2002 Plant Physiology, 128:876-884.","AT5G59170",null,1416.5,-5.2998,0.23252,-22.793,{"v":5.39e-115,"d":"5.39E-115"},{"v":4.42e-112,"d":"4.42E-112"},"Proline-rich extensin-like family protein.","AT4G10270","WIP4",366.1,-3.5049,0.23858,-14.691,{"v":7.39e-49,"d":"7.39E-49"},{"v":5.93e-46,"d":"5.93E-46"},"Wound-responsive family protein.","AT3G07260",null,10.628,-7.1014,1.3589,-5.226,{"v":1.73E-7,"d":"1.73E-07"},{"v":1.37E-4,"d":"1.37E-04"},"SMAD/FHA domain-containing protein."]
["AT1G17810","BETA-TIP",2166.8,-3.6452,0.19973,-18.25,{"v":2.07e-74,"d":"2.07E-74"},{"v":1.63e-71,"d":"1.63E-71"},"full_name=beta-tonoplast intrinsic protein. beta-tonoplast intrinsic protein. beta-tonoplast intrinsic protein (beta-TIP) mRNA, complete","AT4G33150","LKR",1932.3,-2.9383,0.13689,-21.465,{"v":3.3E-102,"d":"3.30E-102"},{"v":2.59e-99,"d":"2.59E-99"},"lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme. Encodes two proteins. One protein is the monofunctional saccharopine dehydrogenase involved in lysine degradation. The longer protein from the same LKR/SDH locus is bifunctional and also has saccharopine dehydrogenase activity. The monofunctional SDH functions mainly to enhance the flux of lysine catabolism. Gene expression is induced by abscisic acid, jasmonate, and under sucrose starvation.","AT2G03890","PI4K GAMMA 7",2903,2.1198,0.14519,14.6,{"v":2.8E-48,"d":"2.80E-48"},{"v":2.15e-45,"d":"2.15E-45"},"full_name=phosphoinositide 4-kinase gamma 7. phosphoinositide 4-kinase gamma 7. Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains.","AT4G20440","smB",183.14,1.2599,0.24734,5.0938,{"v":3.51e-07,"d":"3.51E-07"},{"v":0.000266,"d":"2.66E-04"},"full_name=small nuclear ribonucleoprotein associated protein B. small nuclear ribonucleoprotein associated protein B."]
["AT3G09260","PYK10",12504,2.5767,0.14159,18.198,{"v":5.36e-74,"d":"5.36E-74"},{"v":4.06e-71,"d":"4.06E-71"},"Glycosyl hydrolase superfamily protein. Encodes beta-glucosidase.The major constituent of ER bodies. One of the most abundant proteins in Arabidopsis seedlings. Exist in an soluble (inactive) and non-soluble (active) form, most probably formed in a polymerization process. Involved in the mutualistic interaction between Arabidopsis and the endophytic fungus Piriformospora indica.","AT5G57550","XTH25",1479.2,-4.9233,0.23056,-21.353,{"v":3.64e-101,"d":"3.64E-101"},{"v":2.74e-98,"d":"2.74E-98"},"full_name=xyloglucan endotransglucosylase/hydrolase 25. xyloglucan endotransglucosylase/hydrolase 25. xyloglucan endotransglycosylase-related protein (XTR3)","AT3G10040","HRA1",823.44,-3.4229,0.23757,-14.408,{"v":4.62e-47,"d":"4.62E-47"},3.41E-44,"sequence-specific DNA binding transcription factor. Encodes HRA1 (HYPOXIA RESPONSE ATTENUATOR1), a low oxygen-inducible transcription factor.","ATCG00490","RBCL",174.59,1.5246,0.32443,4.6993,{"v":2.61E-6,"d":"2.61E-06"},1.9E-3,"ribulose-bisphosphate carboxylase. large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds."]
["AT2G05580",null,56969,-1.7379,0.095929,-18.117,2.35E-73,{"v":1.71e-70,"d":"1.71E-70"},"Glycine-rich protein family.","AT5G14780","FDH",3222.4,-3.0524,0.14741,-20.707,{"v":2.99e-95,"d":"2.99E-95"},{"v":2.16e-92,"d":"2.16E-92"},"full_name=formate dehydrogenase. formate dehydrogenase. Encodes a NAD-dependent formate dehydrogenase.","AT1G08570","ACHT4",943.19,2.5489,0.18012,14.152,{"v":1.83e-45,"d":"1.83E-45"},{"v":1.3E-42,"d":"1.30E-42"},"full_name=atypical CYS HIS rich thioredoxin 4. atypical CYS HIS rich thioredoxin 4. Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.","ATCG00830","RPL2.1",15.314,7.2479,1.5509,4.6733,{"v":2.96E-6,"d":"2.96E-06"},0.002074,"full_name=ribosomal protein L2. ribosomal protein L2. encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex"]
["AT3G50440","MES10",3502.4,-1.9438,0.10949,-17.754,{"v":1.62e-70,"d":"1.62E-70"},1.13E-67,"full_name=methyl esterase 10. methylesterase. Encodes a protein shown to have methyl jasmonate esterase activity in vitro. This protein does not act on methyl IAA, MeSA, MeGA4, or MEGA9 in vitro.","AT5G54740","SESA5",1836.3,-3.9484,0.19498,-20.25,{"v":3.56e-91,"d":"3.56E-91"},2.48E-88,"full_name=seed storage albumin 5. seed storage albumin 5.","AT3G55610","P5CS2",2589.1,2.2419,0.16064,13.956,2.88E-44,{"v":1.97e-41,"d":"1.97E-41"},"full_name=delta 1-pyrroline-5-carboxylate synthase 2. delta 1-pyrroline-5-carboxylate synthase 2. encodes delta 1-pyrroline-5-carboxylate synthetase B. Gene expression is induced by dehydration, high salt and ABA. Knock-out mutations in P5CS2 are embryo-lethal. P5CS2 appears to be present in different cells and/or different subcellular locations from P5CS1 in a tissue-dependent manner. Mutants are defective in pollen development.","ATCG01310","RPL2.2",15.011,7.2177,1.5503,4.6558,{"v":3.23E-6,"d":"3.23E-06"},0.002175,"full_name=ribosomal protein L2. ribosomal protein L2. encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex"]
["AT2G02850","ARPN",711.35,-2.6644,0.15038,-17.718,{"v":3.02e-70,"d":"3.02E-70"},{"v":2.04e-67,"d":"2.04E-67"},"full_name=plantacyanin. plantacyanin. Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.","AT4G27440","PORB",6604.2,2.1139,0.10554,20.03,{"v":3.03e-89,"d":"3.03E-89"},{"v":2.04e-86,"d":"2.04E-86"},"full_name=protochlorophyllide oxidoreductase B. protochlorophyllide oxidoreductase B. light-dependent NADPH:protochlorophyllide oxidoreductase B","AT1G21130","IGMT4",336.26,4.3909,0.31704,13.85,1.28E-43,{"v":8.44e-41,"d":"8.44E-41"},"full_name=indole glucosinolate O-methyltransferase 4. O-methyltransferase family protein.","AT3G01270",null,20.326,3.3163,0.72058,4.6023,{"v":4.18e-06,"d":"4.18E-06"},0.002716,"Pectate lyase family protein."]
["AT1G66280","BGLU22",565.11,3.6885,0.20887,17.659,{"v":8.67e-70,"d":"8.67E-70"},{"v":5.66e-67,"d":"5.66E-67"},"Glycosyl hydrolase superfamily protein.","AT1G20010","TUB5",1109.2,2.8687,0.14452,19.85,{"v":1.11e-87,"d":"1.11E-87"},{"v":7.21e-85,"d":"7.21E-85"},"full_name=tubulin beta-5 chain. tubulin beta-5 chain. beta tubulin","AT1G67920",null,263.05,3.6353,0.26264,13.842,1.43E-43,{"v":9.11e-41,"d":"9.11E-41"},"hypothetical protein.","AT3G07820",null,17.098,4.4606,0.99161,4.4984,{"v":6.85e-06,"d":"6.85E-06"},0.004298,"Pectin lyase-like superfamily protein."]
["AT5G35360","CAC2",3338.7,-1.7077,0.096881,-17.627,1.53E-69,{"v":9.63e-67,"d":"9.63E-67"},"full_name=acetyl Co-enzyme a carboxylase biotin carboxylase subunit. acetyl Co-enzyme a carboxylase biotin carboxylase subunit. Encodes biotin carboxylase subunit (CAC2).","AT5G55410",null,548.71,-4.677,0.23652,-19.774,{"v":4.99e-87,"d":"4.99E-87"},{"v":3.13e-84,"d":"3.13E-84"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT3G55980","SZF1",374.36,3.0695,0.22243,13.8,2.56E-43,1.58E-40,"full_name=salt-inducible zinc finger 1. salt-inducible zinc finger 1.","ATCG00280","PSBC",60.923,1.8602,0.4182,4.4481,{"v":8.66e-06,"d":"8.66E-06"},0.005256,"full_name=photosystem II reaction center protein C. photosystem II reaction center protein C. chloroplast gene encoding a CP43 subunit of the photosystem II reaction center. promoter contains a blue-light responsive element."]
["AT3G12203","scpl17",4034.8,-3.3328,0.18915,-17.62,1.74E-69,{"v":1.06e-66,"d":"1.06E-66"},"full_name=serine carboxypeptidase-like 17. serine carboxypeptidase-like 17.","AT1G47540",null,1605.9,-3.4046,0.17317,-19.66,{"v":4.73e-86,"d":"4.73E-86"},{"v":2.87e-83,"d":"2.87E-83"},"Scorpion toxin-like knottin superfamily protein.","AT1G54100","ALDH7B4",3106.3,1.7175,0.12617,13.612,3.39E-42,2.02E-39,"full_name=aldehyde dehydrogenase 7B4. aldehyde dehydrogenase 7B4. Aldehyde dehydrogenase","AT2G02850","ARPN",27.869,2.321,0.52451,4.4251,{"v":9.64e-06,"d":"9.64E-06"},0.00566,"full_name=plantacyanin. plantacyanin. Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil."]
["AT3G22640","PAP85",60490,-2.4177,0.13826,-17.487,{"v":1.8E-68,"d":"1.80E-68"},{"v":1.06e-65,"d":"1.06E-65"},"cupin family protein.","AT3G62730",null,1031.6,-4.1532,0.21208,-19.583,{"v":2.16e-85,"d":"2.16E-85"},{"v":1.27e-82,"d":"1.27E-82"},"desiccation-like protein.","AT3G44990","XTH31",464.7,-2.5406,0.19031,-13.35,1.19E-40,{"v":6.84e-38,"d":"6.84E-38"},"full_name=XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31. xyloglucan endo-transglycosylase-related 8. Encodes a xyloglucan endotransglycosylase/hydrolase.","AT4G27160","SESA3",383.1,1.2055,0.27986,4.3076,{"v":1.65e-05,"d":"1.65E-05"},9.384E-3,"full_name=seed storage albumin 3. seed storage albumin 3."]
["AT5G07030",null,711.21,-2.6125,0.15053,-17.356,1.78E-67,1.02E-64,"Eukaryotic aspartyl protease family protein.","AT1G07590",null,8706.1,-2.348,0.12031,-19.516,{"v":7.95e-85,"d":"7.95E-85"},{"v":4.54e-82,"d":"4.54E-82"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT5G44417",null,575.28,3.5078,0.2644,13.267,{"v":3.6e-40,"d":"3.60E-40"},{"v":2.01e-37,"d":"2.01E-37"},"pseudogene.","ATCG00350","PSAA",63.872,1.8523,0.43156,4.2922,{"v":1.77E-5,"d":"1.77E-05"},0.009758,"Photosystem I, PsaA/PsaB protein. Encodes psaA protein comprising the reaction center for photosystem I along with psaB protein; hydrophobic protein encoded by the chloroplast genome."]
["AT4G36880","CP1",474.28,3.3643,0.19621,17.147,{"v":6.62e-66,"d":"6.62E-66"},{"v":3.68e-63,"d":"3.68E-63"},"full_name=cysteine proteinase1. cysteine proteinase1.","AT5G38420","RBCS2B",2809.9,2.766,0.14241,19.423,{"v":4.94e-84,"d":"4.94E-84"},{"v":2.74e-81,"d":"2.74E-81"},"full_name=Rubisco small subunit 2B. Ribulose bisphosphate carboxylase (small chain) family protein. Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410).","AT5G52640","HSP90.1",330.03,3.2867,0.24817,13.244,{"v":4.88e-40,"d":"4.88E-40"},2.65E-37,"full_name=heat shock protein 90.1. heat shock-like protein. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance."]
["AT1G12810",null,2035.3,-2.5154,0.14696,-17.116,1.12E-65,{"v":6.07e-63,"d":"6.07E-63"},"proline-rich family protein.","AT5G03350","SAI-LLP1",405.22,6.3421,0.32721,19.383,1.08E-83,{"v":5.83e-81,"d":"5.83E-81"},"Legume lectin family protein.","AT1G72770","HAB1",484.55,2.546,0.19414,13.114,{"v":2.72e-39,"d":"2.72E-39"},1.44E-36,"full_name=HYPERSENSITIVE TO ABA1. HYPERSENSITIVE TO ABA1. mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid."]
["AT4G13940","HOG1",8497.9,1.2719,0.0745,17.072,2.41E-65,{"v":1.27e-62,"d":"1.27E-62"},"full_name=HOMOLOGY-DEPENDENT GENE SILENCING 1. S-adenosyl-L-homocysteine hydrolase. Encodes a S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing.","AT1G54100","ALDH7B4",4847.9,-2.007,0.10475,-19.16,{"v":7.95e-82,"d":"7.95E-82"},{"v":4.16e-79,"d":"4.16E-79"},"full_name=aldehyde dehydrogenase 7B4. aldehyde dehydrogenase 7B4. Aldehyde dehydrogenase","AT2G15620","NIR1",1056.1,2.4934,0.19222,12.971,{"v":1.78e-38,"d":"1.78E-38"},{"v":9.11e-36,"d":"9.11E-36"},"full_name=nitrite reductase 1. nitrite reductase 1. Involved in the second step of nitrate assimilation. Its expression is induced by nitrate."]
["AT3G30775","ERD5",3155.6,-3.0987,0.18201,-17.025,{"v":5.39e-65,"d":"5.39E-65"},2.76E-62,"full_name=EARLY RESPONSIVE TO DEHYDRATION 5. Methylenetetrahydrofolate reductase family protein. Encodes a proline oxidase that is predicted to localize to the inner mitochondrial membrane, its mRNA expression induced by high levels of Al and by osmotic stress. The promoter contains an L-proline-inducible element.","AT3G48990","AAE3",8324.2,-1.8598,0.098374,-18.905,1.03E-79,{"v":5.25e-77,"d":"5.25E-77"},"full_name=ACYL-ACTIVATING ENZYME 3. AMP-dependent synthetase and ligase family protein. Encodes an oxalyl-CoA synthetase and is required for oxalate degradation, for normal seed development, and for defense against an oxalate-producing fungal pathogen.","AT1G20440","COR47",864.96,2.9932,0.23479,12.748,{"v":3.18e-37,"d":"3.18E-37"},1.59E-34,"full_name=cold-regulated 47. cold-regulated 47. Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. Cold regulated gene, amino acid sequence homology with Group II LEA (late embryogenesis abundant) proteins. Also responds to osmotic stress, ABA, dehydration and inhibits e.coli growth while overexpressed. COR47 and RAB18 double overexpressor plants are cold tolerant."]
["AT3G62730",null,7375,-2.2568,0.13307,-16.959,1.65E-64,{"v":8.23e-62,"d":"8.23E-62"},"desiccation-like protein.","AT1G77120","ADH1",1858.7,-2.6422,0.13986,-18.892,1.32E-79,{"v":6.55e-77,"d":"6.55E-77"},"full_name=alcohol dehydrogenase 1. alcohol dehydrogenase 1. Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.","AT5G03240","UBQ3",5781.1,2.2552,0.17826,12.651,1.11E-36,{"v":5.39e-34,"d":"5.39E-34"},"full_name=polyubiquitin 3. polyubiquitin 3. encodes ubiquitin that is attached to proteins destined for degradation. UBQ3 is most homologous with UBQ4, and is expressed in higher levels in vegetative tissue but lower levels in flowers than UBQ4. UBQ3 encodes different number of ubiquitins in different ecotypes. UBQ3 transcript level is modulated by UV-B and light/dark treatments."]
["AT4G05110","ENT6",461.25,-3.0804,0.18395,-16.746,{"v":6.07e-63,"d":"6.07E-63"},{"v":2.94e-60,"d":"2.94E-60"},"full_name=equilibrative nucleoside transporter 6. equilibrative nucleoside transporter 6.","AT3G09260","PYK10",37675,1.8455,0.09845,18.745,2.11E-78,1.02E-75,"Glycosyl hydrolase superfamily protein. Encodes beta-glucosidase.The major constituent of ER bodies. One of the most abundant proteins in Arabidopsis seedlings. Exist in an soluble (inactive) and non-soluble (active) form, most probably formed in a polymerization process. Involved in the mutualistic interaction between Arabidopsis and the endophytic fungus Piriformospora indica.","AT5G65720","NFS1",548.33,2.5178,0.19921,12.639,1.29E-36,{"v":6.13e-34,"d":"6.13E-34"},"full_name=nitrogen fixation S (NIFS)-like 1. nitrogen fixation S (NIFS)-like 1. Encodes a cysteine desulfurase whose activity is dependent on AtSufE activation. It requires pyridoxal phosphate (PLP) for proper folding. Its catalytic efficiency is increase three-fold in the presence of AtFH (frataxin)."]
["AT1G66270","BGLU21",1156,3.3802,0.20285,16.664,{"v":2.41e-62,"d":"2.41E-62"},1.14E-59,"Glycosyl hydrolase superfamily protein. BGLU21 encodes a beta-glucosidase that has a high level of activity against the naturally occuring secondary metabolite scopolin. Recombinant BGLU21 produced in insect cells shows lower levels of activity using the structurally similar substrates esculin (33%) and 4-MU-glucoside (9%). BGLU21 is glycosylated in planta and has a C-terminal ER retention signal. Transcript analysis as well as protein extraction and western blotting from various plant organs suggest that BGLU21 is only present in roots and seedlings. Transcript levels increase in response to cold, auxin (2,4-D), and methyl jasmonate treatments.","AT1G67750",null,1133,2.4757,0.13212,18.738,{"v":2.43e-78,"d":"2.43E-78"},1.15E-75,"Pectate lyase family protein.","AT4G16190",null,1506.9,2.0875,0.16531,12.627,1.49E-36,{"v":6.89e-34,"d":"6.89E-34"},"Papain family cysteine protease."]
["AT5G54740","SESA5",15684,-2.5762,0.15521,-16.598,{"v":7.18e-62,"d":"7.18E-62"},{"v":3.31e-59,"d":"3.31E-59"},"full_name=seed storage albumin 5. seed storage albumin 5.","AT4G26590","OPT5",782.82,-2.8758,0.15408,-18.664,{"v":9.8e-78,"d":"9.80E-78"},{"v":4.5e-75,"d":"4.50E-75"},"full_name=oligopeptide transporter 5. oligopeptide transporter 5. oligopeptide transporter","AT4G11570","ATPYRP2",572.42,2.4437,0.19372,12.615,1.75E-36,{"v":7.73e-34,"d":"7.73E-34"},"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein."]
["AT4G25140","OLEO1",37284,-2.5,0.1516,-16.491,{"v":4.28e-61,"d":"4.28E-61"},{"v":1.93e-58,"d":"1.93E-58"},"full_name=oleosin 1. oleosin 1. Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.","AT1G11840","GLX1",9221.3,-1.7412,0.09358,-18.607,{"v":2.84e-77,"d":"2.84E-77"},{"v":1.27e-74,"d":"1.27E-74"},"full_name=glyoxalase I homolog. glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein. Encodes a glyoxalase I homolog ATGLX1.","AT5G25610","RD22",1121.5,2.3549,0.18668,12.614,1.76E-36,{"v":7.73e-34,"d":"7.73E-34"},"full_name=RESPONSIVE TO DESSICATION 22. BURP domain-containing protein. responsive to dehydration 22 (RD22) mediated by ABA"]
["AT5G22460",null,1226.7,2.3414,0.14448,16.205,{"v":4.62e-59,"d":"4.62E-59"},{"v":2.03e-56,"d":"2.03E-56"},"alpha/beta-Hydrolases superfamily protein.","AT4G36880","CP1",1968.8,2.3052,0.12446,18.522,{"v":1.38e-76,"d":"1.38E-76"},6.06E-74,"full_name=cysteine proteinase1. cysteine proteinase1.","AT5G14740","CA2",215.57,3.6903,0.29295,12.597,{"v":2.19e-36,"d":"2.19E-36"},{"v":9.42e-34,"d":"9.42E-34"},"full_name=carbonic anhydrase 2. carbonic anhydrase 2. Encodes a beta carbonic anhydrase likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform."]
["AT5G19550","ASP2",5387.3,-2.2433,0.13865,-16.18,{"v":7.03e-59,"d":"7.03E-59"},{"v":3.02e-56,"d":"3.02E-56"},"full_name=aspartate aminotransferase 2. aspartate aminotransferase 2. Nitrogen metabolism. Major cytosolic isoenzyme controlling aspartate biosynthesis in the light.","AT3G26290","CYP71B26",1895.5,-3.1513,0.17069,-18.462,{"v":4.18e-76,"d":"4.18E-76"},{"v":1.79e-73,"d":"1.79E-73"},"full_name=cytochrome P450, family 71, subfamily B, polypeptide 26. cytochrome P450, family 71, subfamily B, polypeptide 26. putative cytochrome P450","AT1G60190","PUB19",565.01,2.9963,0.2382,12.579,{"v":2.75e-36,"d":"2.75E-36"},{"v":1.15e-33,"d":"1.15E-33"},"full_name=plant U-box 19. ARM repeat superfamily protein. Encodes PUB19, a plant U-box armadillo repeat protein. Involved in salt inhibition of germination together with PUB18."]
["AT3G29360","UGD2",556.74,7.7479,0.48047,16.126,{"v":1.69e-58,"d":"1.69E-58"},{"v":7.1e-56,"d":"7.10E-56"},"full_name=UDP-glucose dehydrogenase 2. UDP-glucose 6-dehydrogenase family protein. Encodes one of four UDP-glucose dehydrogenase UGD) genes. Mutation of this gene in combination with UGD3 leads to swollen plant cell walls and severe developmental defects associated with changes in pectic polysaccharides.","AT5G22460",null,868.56,-3.231,0.17711,-18.243,2.35E-74,{"v":9.85e-72,"d":"9.85E-72"},"alpha/beta-Hydrolases superfamily protein.","AT1G59870","PEN3",889.08,1.8827,0.1504,12.518,{"v":5.97e-36,"d":"5.97E-36"},{"v":2.45e-33,"d":"2.45E-33"},"full_name=PENETRATION 3. ABC-2 and Plant PDR ABC-type transporter family protein. ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acid%E2%80%93dependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance."]
["AT1G02930","GSTF6",587.14,3.9886,0.24756,16.112,{"v":2.11e-58,"d":"2.11E-58"},{"v":8.67e-56,"d":"8.67E-56"},"full_name=glutathione S-transferase 6. glutathione S-transferase 6. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).","AT2G26400","ARD3",358.01,5.8054,0.31982,18.152,1.23E-73,{"v":5.04e-71,"d":"5.04E-71"},"full_name=acireductone dioxygenase 3. acireductone dioxygenase 3. Encodes a protein predicted to belong to the acireductone dioxygenase (ARD/ARD%E2%80%99)family.","AT1G22930",null,1057.9,1.8802,0.15057,12.487,{"v":8.82e-36,"d":"8.82E-36"},{"v":3.54e-33,"d":"3.54E-33"},"T-complex protein 11."]
["AT2G46960","CYP709B1",550.14,-2.7621,0.173,-15.966,{"v":2.21e-57,"d":"2.21E-57"},{"v":8.91e-55,"d":"8.91E-55"},"full_name=cytochrome P450, family 709, subfamily B, polypeptide 1. cytochrome P450, family 709, subfamily B, polypeptide 1. member of CYP709B","AT1G02850","BGLU11",3027,-2.502,0.13954,-17.931,{"v":6.78e-72,"d":"6.78E-72"},2.72E-69,"full_name=beta glucosidase 11. beta glucosidase 11.","AT4G32940","GAMMA-VPE",963.54,2.0107,0.16176,12.43,{"v":1.79e-35,"d":"1.79E-35"},{"v":7.05e-33,"d":"7.05E-33"},"full_name=gamma vacuolar processing enzyme. gamma vacuolar processing enzyme. Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death."]
["AT5G03120",null,502.96,-2.863,0.1798,-15.923,{"v":4.38e-57,"d":"4.38E-57"},{"v":1.73e-54,"d":"1.73E-54"},"transmembrane protein.","AT4G02360",null,920.2,-2.7844,0.1556,-17.894,{"v":1.32e-71,"d":"1.32E-71"},5.16E-69,"transmembrane protein, putative (Protein of unknown function, DUF538).","AT1G27461","DRG",1071.9,1.8565,0.14951,12.417,{"v":2.11e-35,"d":"2.11E-35"},{"v":8.1e-33,"d":"8.10E-33"},"hypothetical protein."]
["AT1G11170",null,2020.1,-1.6217,0.10209,-15.884,{"v":8.14e-57,"d":"8.14E-57"},{"v":3.14e-54,"d":"3.14E-54"},"lysine ketoglutarate reductase trans-splicing-like protein (DUF707).","AT2G41230","ORS1",815.85,-3.8206,0.21485,-17.782,{"v":9.66e-71,"d":"9.66E-71"},{"v":3.71e-68,"d":"3.71E-68"},"full_name=ORGAN SIZE RELATED 1. ORGAN SIZE-like protein. Encodes an ER-localized plant hormone-responsive gene and appears to act redundantly with ARGOS and ARL during organ growth.","AT5G25980","TGG2",576.94,2.4488,0.1976,12.393,{"v":2.85e-35,"d":"2.85E-35"},{"v":1.07e-32,"d":"1.07E-32"},"full_name=glucoside glucohydrolase 2. glucoside glucohydrolase 2. Myrosinase (thioglucoside glucohydrolase) gene involved in glucosinoloate metabolism."]
["AT2G24762","GDU4",295.08,-4.0843,0.25763,-15.853,1.33E-56,{"v":5.05e-54,"d":"5.05E-54"},"full_name=glutamine dumper 4. glutamine dumper 4. Encodes a member of the GDU (glutamine dumper) family proteins involved in amino acid export: At4g31730 (GDU1), At4g25760 (GDU2), At5g57685 (GDU3), At2g24762 (GDU4), At5g24920 (GDU5), At3g30725 (GDU6) and At5g38770 (GDU7).","AT1G52000",null,302.17,5.6678,0.31989,17.718,3.05E-70,1.15E-67,"Mannose-binding lectin superfamily protein.","AT2G07698",null,190.82,4.3396,0.35106,12.361,{"v":4.24e-35,"d":"4.24E-35"},{"v":1.56e-32,"d":"1.56E-32"},"ATPase, F1 complex, alpha subunit protein."]
["AT3G02480","ABR",42713,-1.4108,0.089419,-15.778,{"v":4.44e-56,"d":"4.44E-56"},1.65E-53,"Late embryogenesis abundant protein (LEA) family protein.","AT1G15820","LHCB6",1517.7,2.6459,0.1497,17.675,6.57E-70,2.43E-67,"full_name=light harvesting complex photosystem II subunit 6. light harvesting complex photosystem II subunit 6. Lhcb6 protein (Lhcb6), light harvesting complex of photosystem II.","AT1G21000","PLATZ1",1234.2,1.7204,0.14062,12.234,{"v":2.05e-34,"d":"2.05E-34"},{"v":7.41e-32,"d":"7.41E-32"},"PLATZ transcription factor family protein."]
["AT4G13840","CER26",1155.3,-1.9254,0.12394,-15.534,2.04E-54,{"v":7.34e-52,"d":"7.34E-52"},"HXXXD-type acyl-transferase family protein.","AT3G48580","XTH11",688.23,-4.4836,0.25685,-17.456,{"v":3.09e-68,"d":"3.09E-68"},1.12E-65,"full_name=xyloglucan endotransglucosylase/hydrolase 11. xyloglucan endotransglucosylase/hydrolase 11.","AT1G01060","LHY",173.33,5.4019,0.44397,12.167,{"v":4.65e-34,"d":"4.65E-34"},1.65E-31,"full_name=LATE ELONGATED HYPOCOTYL. Homeodomain-like superfamily protein. LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1"]
["AT4G21960","PRXR1",94536,-1.4915,0.09602,-15.534,{"v":2.06e-54,"d":"2.06E-54"},{"v":7.34e-52,"d":"7.34E-52"},"Peroxidase superfamily protein. Encodes AT4g21960 (AT4g21960/T8O5_170).","AT4G36220","FAH1",1718.1,-2.2779,0.13111,-17.373,{"v":1.32e-67,"d":"1.32E-67"},{"v":4.69e-65,"d":"4.69E-65"},"full_name=ferulic acid 5-hydroxylase 1. ferulic acid 5-hydroxylase 1. encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.","AT1G77450","NAC032",563.47,3.2812,0.26981,12.161,{"v":5e-34,"d":"5.00E-34"},{"v":1.74e-31,"d":"1.74E-31"},"full_name=NAC domain containing protein 32. NAC domain containing protein 32."]
["AT1G19530",null,1200.8,-2.1259,0.13703,-15.514,{"v":2.78e-54,"d":"2.78E-54"},{"v":9.73e-52,"d":"9.73E-52"},"DNA polymerase epsilon catalytic subunit A.","AT5G47550","CYS5",668.16,-4.2088,0.24243,-17.361,{"v":1.63e-67,"d":"1.63E-67"},{"v":5.69e-65,"d":"5.69E-65"},"Cystatin/monellin superfamily protein.","AT2G18050","HIS1-3",1690,2.3287,0.19261,12.091,1.18E-33,4.05E-31,"full_name=histone H1-3. histone H1-3. encodes a structurally divergent linker histone whose gene expression is induced by dehydration and ABA."]
["AT4G18020","APRR2",1465.3,-1.8555,0.11965,-15.508,{"v":3.08e-54,"d":"3.08E-54"},{"v":1.06e-51,"d":"1.06E-51"},"CheY-like two-component responsive regulator family protein. Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9).","AT5G09530","PELPK1",580.34,-6.1722,0.35669,-17.304,{"v":4.38e-67,"d":"4.38E-67"},{"v":1.5E-64,"d":"1.50E-64"},"full_name=Pro-Glu-Leu|Ile|Val-Pro-Lys 1. hydroxyproline-rich glycoprotein family protein. The gene encodes a unique protein which contains 36 repeats of a unique pentapeptide (Pro-Glu-Leu|Ile|Val-Pro-Lys). It has been shown tobe involved in growth and development.","AT5G65530","ATRLCK VI_A3",1530.6,1.8291,0.15137,12.084,1.29E-33,4.33E-31,"Protein kinase superfamily protein. Encodes a protein kinase involved in mediating resistance to fungi and also trichome branch number. Kinase activity is increased by ROP6 which also affects its sub-cellular localization (becomes localized to the cell periphery_"]
["AT2G47750","GH3.9",451.62,-3.4095,0.22033,-15.474,{"v":5.16e-54,"d":"5.16E-54"},1.74E-51,"full_name=putative indole-3-acetic acid-amido synthetase GH3.9. putative indole-3-acetic acid-amido synthetase GH3.9. Encodes GH3.9, a member of the GH3 family auxin-responsive genes. gh3.9-1 mutants had greater primary root length, increased sensitivity to indole-3-acetic acid (IAA)-mediated root growth inhibition, but no obvious effects on apical dominance or leaf morphology.","AT1G73220","2024-10-01",405.52,-4.2179,0.24472,-17.236,1.44E-66,{"v":4.83e-64,"d":"4.83E-64"},"full_name=organic cation/carnitine transporter1. organic cation/carnitine transporter1.","AT4G36360","BGAL3",846.26,2.3824,0.19792,12.037,{"v":2.26e-33,"d":"2.26E-33"},{"v":7.46e-31,"d":"7.46E-31"},"full_name=beta-galactosidase 3. beta-galactosidase 3. putative beta-galactosidase (BGAL3 gene)"]
["AT1G62290","PASPA2",33928,-1.45,0.094152,-15.401,1.62E-53,{"v":5.36e-51,"d":"5.36E-51"},"Saposin-like aspartyl protease family protein.","AT1G52890","NAC019",965.9,-2.8053,0.16336,-17.173,{"v":4.24e-66,"d":"4.24E-66"},{"v":1.4e-63,"d":"1.40E-63"},"full_name=NAC domain containing protein 19. NAC domain containing protein 19. encodes a NAC transcription factor whose expression is induced by drought, high salt, and abscisic acid. This gene binds to ERD1 promoter in vitro.","AT1G78070",null,571.42,2.8928,0.24036,12.035,{"v":2.32e-33,"d":"2.32E-33"},{"v":7.53e-31,"d":"7.53E-31"},"Transducin/WD40 repeat-like superfamily protein."]
["AT5G20860",null,348.03,-4.0673,0.26654,-15.26,{"v":1.42e-52,"d":"1.42E-52"},4.62E-50,"Plant invertase/pectin methylesterase inhibitor superfamily.","AT2G33590","CRL1",1236.7,-2.4314,0.1434,-16.955,{"v":1.77e-64,"d":"1.77E-64"},{"v":5.74e-62,"d":"5.74E-62"},"full_name=CCR(Cinnamoyl coA:NADP oxidoreductase)-like 1. NAD(P)-binding Rossmann-fold superfamily protein. Encodes a protein with homology to members of the dihydroflavonol-4-reductase (DFR) superfamily. The expression pattern of AtCRL1 indicates that CRL1 has a role in embryogenesis and seed germination. AtCRL1 is induced by ABA, drought and heat, and is highly expressed in seeds.","AT1G04770","SDI2",378.59,-2.9515,0.24551,-12.022,2.73E-33,{"v":8.69e-31,"d":"8.69E-31"},"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT2G40460",null,1665.2,-1.912,0.12568,-15.213,{"v":2.9e-52,"d":"2.90E-52"},{"v":9.3e-50,"d":"9.30E-50"},"Major facilitator superfamily protein.","AT2G10940",null,318.74,4.0569,0.24339,16.668,{"v":2.23e-62,"d":"2.23E-62"},{"v":7.13e-60,"d":"7.13E-60"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT4G29190","OZF2",1051.1,2.0373,0.16961,12.011,3.09E-33,{"v":9.68e-31,"d":"9.68E-31"},"full_name=oxidation-related zinc finger 2. Zinc finger C-x8-C-x5-C-x3-H type family protein."]
["AT1G62480",null,867.78,-4.0891,0.26977,-15.158,{"v":6.74e-52,"d":"6.74E-52"},2.12E-49,"Vacuolar calcium-binding protein-like protein.","AT3G46780","PTAC16",461.16,3.6069,0.21668,16.646,{"v":3.21e-62,"d":"3.21E-62"},{"v":1.01e-59,"d":"1.01E-59"},"full_name=plastid transcriptionally active 16. plastid transcriptionally active 16.","AT4G02280","SUS3",3109.8,2.1349,0.17919,11.914,{"v":9.96e-33,"d":"9.96E-33"},{"v":3.06e-30,"d":"3.06E-30"},"full_name=sucrose synthase 3. sucrose synthase 3. Encodes a protein with sucrose synthase activity (SUS3). It appears to be important for sucrose metabolism in developing seeds, especially during the late maturation phase, about 18 days after flowering."]
["AT3G47420","G3Pp1",960.33,-1.9863,0.13148,-15.107,{"v":1.45e-51,"d":"1.45E-51"},{"v":4.5e-49,"d":"4.50E-49"},"full_name=Glycerol-3-phosphate permease 1. putative glycerol-3-phosphate transporter 1. Encodes a Pi starvation-responsive protein AtPS3. A member of the phosphate starvation-induced glycerol-3-phosphate permease gene family: AT3G47420(G3Pp1), AT4G25220(G3Pp2), AT1G30560(G3Pp3), AT4G17550(G3Pp4) and AT2G13100(G3Pp5). Its expression is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots.","AT4G02520","GSTF2",409.71,-3.7723,0.22665,-16.644,{"v":3.37e-62,"d":"3.37E-62"},{"v":1.04e-59,"d":"1.04E-59"},"full_name=glutathione S-transferase PHI 2. glutathione S-transferase PHI 2. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.","AT2G27380","EPR1",10352,2.1729,0.18265,11.897,1.23E-32,{"v":3.73e-30,"d":"3.73E-30"},"full_name=extensin proline-rich 1. extensin proline-rich 1. Encodes an extensin like gene involved in seed germination."]
["AT2G34315",null,412.81,-3.0493,0.20291,-15.028,{"v":4.85e-51,"d":"4.85E-51"},1.48E-48,"avirulence induced family protein.","AT2G38530","LTP2",48072,-1.5908,0.095714,-16.621,{"v":4.93e-62,"d":"4.93E-62"},{"v":1.5E-59,"d":"1.50E-59"},"full_name=lipid transfer protein 2. lipid transfer protein 2. Involved in lipid transfer between membranes. Belongs to a family of Lipid transfer proteins. Sequence similarity to other plant/Arabidopsis LPT genes but highest similarity to LPT1. Stress and pathogen-inducible motifs found in the upstream region. Expressed in flower, leaves and siliques but absent in roots. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.","AT3G47080",null,454.27,2.296,0.19431,11.816,{"v":3.22e-32,"d":"3.22E-32"},{"v":9.58e-30,"d":"9.58E-30"},"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT5G65140","TPPJ",865.45,-2.1352,0.1423,-15.004,{"v":6.89e-51,"d":"6.89E-51"},2.07E-48,"full_name=trehalose-6-phosphate phosphatase J. Haloacid dehalogenase-like hydrolase (HAD) superfamily protein.","AT1G50010","TUA2",2417.6,1.729,0.1041,16.609,{"v":6.03e-62,"d":"6.03E-62"},{"v":1.8E-59,"d":"1.80E-59"},"full_name=tubulin alpha-2 chain. tubulin alpha-2 chain. Encodes alpha-2,4 tubulin. TUA2 and TUA4 encode identical proteins.","AT3G09440",null,3093.9,1.6632,0.14087,11.807,{"v":3.59e-32,"d":"3.59E-32"},{"v":1.05e-29,"d":"1.05E-29"},"Heat shock protein 70 (Hsp 70) family protein."]
["AT3G27660","OLEO4",6513.2,-2.6784,0.17931,-14.937,{"v":1.88e-50,"d":"1.88E-50"},{"v":5.57e-48,"d":"5.57E-48"},"full_name=oleosin 4. oleosin 4. Encodes oleosin4 (Plant Cell, 2006, 18:1961), a protein found in oil bodies, involved in seed lipid accumulation. Functions in freezing tolerance of seeds. Note: also referred to as OLE3 in Plant Journal 2008, 55:798.","AT4G39330","CAD9",550.54,2.8924,0.17429,16.595,{"v":7.51e-62,"d":"7.51E-62"},{"v":2.21e-59,"d":"2.21E-59"},"full_name=cinnamyl alcohol dehydrogenase 9. cinnamyl alcohol dehydrogenase 9.","ATMG01190","atp1",163.93,4.3387,0.36895,11.76,{"v":6.3e-32,"d":"6.30E-32"},{"v":1.82e-29,"d":"1.82E-29"}]
["AT5G64080","XYP1",4747.6,-1.4519,0.097905,-14.83,{"v":9.39e-50,"d":"9.39E-50"},{"v":2.73e-47,"d":"2.73E-47"},"full_name=xylogen protein 1. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT5G45650",null,344.27,6.4851,0.39244,16.525,{"v":2.42e-61,"d":"2.42E-61"},{"v":7e-59,"d":"7.00E-59"},"subtilase family protein.","AT1G64370","PARCL",352.08,3.0976,0.26925,11.504,1.26E-30,{"v":3.57e-28,"d":"3.57E-28"},"filaggrin-like protein."]
["AT1G43800","FTM1",3669.4,-5.364,0.36206,-14.815,{"v":1.17e-49,"d":"1.17E-49"},{"v":3.36e-47,"d":"3.36E-47"},"full_name=FLORAL TRANSITION AT THE MERISTEM1. Plant stearoyl-acyl-carrier-protein desaturase family protein.","AT3G26520","TIP2",424.69,3.9219,0.23888,16.418,{"v":1.43e-60,"d":"1.43E-60"},{"v":4.09e-58,"d":"4.09E-58"},"full_name=tonoplast intrinsic protein 2. tonoplast intrinsic protein 2. gamma tonoplast intrinsic protein 2 (TIP2). expressed throughout the plant and transcript level is increased upon NaCl or ABA treatments. NaCl stress-sensitive yeast mutant strains exhibit more resistance to salt when expressing this protein.","AT5G48850","ATSDI1",226.12,-2.9712,0.2583,-11.503,1.27E-30,{"v":3.57e-28,"d":"3.57E-28"},"full_name=SULPHUR DEFICIENCY-INDUCED 1. Tetratricopeptide repeat (TPR)-like superfamily protein. homologous to the wheat sulphate deficiency-induced gene sdi1. Expression in root and leaf is induced by sulfur starvation. Knockout mutants retained higher root and leaf sulfate concentrations, indicating a role in regulation of stored sulfate pools."]
["AT5G59170",null,8967.1,-1.9896,0.13488,-14.751,{"v":3.04e-49,"d":"3.04E-49"},{"v":8.6e-47,"d":"8.60E-47"},"Proline-rich extensin-like family protein.","AT3G27660","OLEO4",707.59,-4.3194,0.26349,-16.393,2.15E-60,{"v":6.04e-58,"d":"6.04E-58"},"full_name=oleosin 4. oleosin 4. Encodes oleosin4 (Plant Cell, 2006, 18:1961), a protein found in oil bodies, involved in seed lipid accumulation. Functions in freezing tolerance of seeds. Note: also referred to as OLE3 in Plant Journal 2008, 55:798.","AT5G04340","ZAT6",154.23,4.6055,0.40067,11.494,1.41E-30,{"v":3.88e-28,"d":"3.88E-28"},"full_name=zinc finger of Arabidopsis thaliana 6. 6. putative c2h2 zinc finger transcription factor mRNA,"]
["AT1G64970","G-TMT",521.19,3.9594,0.27174,14.571,{"v":4.32e-48,"d":"4.32E-48"},{"v":1.2e-45,"d":"1.20E-45"},"full_name=gamma-tocopherol methyltransferase. gamma-tocopherol methyltransferase. gamma-tocopherol methyltransferase (g-TMT) mRNA, nuclear; mutant has Deficient in alpha and beta tocopherol; Accumulates gamma tocopherol in leaves","AT1G29930","CAB1",14628,2.2621,0.13904,16.269,{"v":1.64e-59,"d":"1.64E-59"},{"v":4.55e-57,"d":"4.55E-57"},"full_name=chlorophyll A/B binding protein 1. chlorophyll A/B binding protein 1. Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.","AT1G70780",null,1431.6,1.7557,0.15279,11.491,1.47E-30,3.98E-28,"hypothetical protein."]
["AT1G03103","LTPG19",427.12,-3.811,0.26182,-14.556,{"v":5.36e-48,"d":"5.36E-48"},{"v":1.47e-45,"d":"1.47E-45"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT1G72610","GER1",280.55,5.0424,0.31116,16.205,{"v":4.63e-59,"d":"4.63E-59"},{"v":1.26e-56,"d":"1.26E-56"},"full_name=germin-like protein 1. germin-like protein 1. germin-like protein (GLP1)","AT3G20250","PUM5",732.45,1.8928,0.16527,11.452,{"v":2.29e-30,"d":"2.29E-30"},{"v":6.12e-28,"d":"6.12E-28"},"full_name=pumilio 5. pumilio 5. Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts."]
["AT4G34050","CCoAOMT1",4273.3,-1.748,0.12062,-14.492,{"v":1.36e-47,"d":"1.36E-47"},{"v":3.68e-45,"d":"3.68E-45"},"full_name=caffeoyl coenzyme A O-methyltransferase 1. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT2G43520","TI2",483.77,-4.2188,0.2604,-16.202,{"v":4.92e-59,"d":"4.92E-59"},{"v":1.32e-56,"d":"1.32E-56"},"full_name=trypsin inhibitor protein 2. trypsin inhibitor protein 2. Encodes putative trypsin inhibitor protein which may function in defense against herbivory. Member of the defensin-like (DEFL) family.","AT3G27060","TSO2",411.48,-2.2018,0.19316,-11.399,{"v":4.24e-30,"d":"4.24E-30"},{"v":1.12e-27,"d":"1.12E-27"},"full_name=TSO MEANING 'UGLY' IN CHINESE 2. Ferritin/ribonucleotide reductase-like family protein. Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes. TSO2 transcription occurs predominantly at the S-phase of the cell cycle and its expression pattern is consistent with its role in dNDP biosynthesis during DNA replication in actively dividing cells. Critical for cell cycle progression, DNA damage repair and plant development."]
["AT1G33700",null,740.54,-2.2748,0.15794,-14.403,{"v":4.96e-47,"d":"4.96E-47"},1.32E-44,"Beta-glucosidase, GBA2 type family protein.","AT1G04820","TUA4",2487.8,1.7201,0.10626,16.187,{"v":6.21e-59,"d":"6.21E-59"},{"v":1.65e-56,"d":"1.65E-56"},"full_name=tubulin alpha-4 chain. tubulin alpha-4 chain. Encodes an alpha tubulin isoform that is expressed in roots, leaves and flowers.","AT5G26340","MSS1",193.49,3.9512,0.34778,11.361,{"v":6.54e-30,"d":"6.54E-30"},{"v":1.7e-27,"d":"1.70E-27"},"Major facilitator superfamily protein. Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD."]
["AT2G38540","LP1",1878.8,2.2352,0.15523,14.4,{"v":5.18e-47,"d":"5.18E-47"},1.36E-44,"full_name=lipid transfer protein 1. lipid transfer protein 1. Non-specific lipid transfer protein. Binds calmodulin in a Ca2+-independent manner. Localized to the cell wall. Specifically expressed in L1 epidermal layer. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.","AT5G48100","TT10",431.18,-6.0725,0.37727,-16.096,{"v":2.72e-58,"d":"2.72E-58"},{"v":7.11e-56,"d":"7.11E-56"},"full_name=TRANSPARENT TESTA 10. Laccase/Diphenol oxidase family protein. Encodes a protein that is similar to laccase-like polyphenol oxidases. Involved in lignin and flavonoids biosynthesis. It has four conserved copper binding domains. Expressed in developing testa, where it colocalizes with the flavonoid end products proanthocyanidins and flavonols. Mutant plants exhibited a delay in developmentally determined browning of the testa, characterized by the pale brown color of seed coat. The tt10 mutant seeds accumulate more epicatechin monomers and more soluble proanthocyanidins than wild-type seeds. Flavonol composition was also affected in tt10 seeds, which exhibited a higher ratio of quercetin rhamnoside monomers versus dimers than wild-type seeds.","AT3G48690","CXE12",3353.7,2.1247,0.1871,11.356,{"v":6.95e-30,"d":"6.95E-30"},{"v":1.78e-27,"d":"1.78E-27"},"alpha/beta-Hydrolases superfamily protein. Encodes a protein with carboxylesterase whose activity was tested using both pNA and 2,4-D-methyl."]
["AT5G26000","TGG1",6737.1,-1.7969,0.12507,-14.367,{"v":8.29e-47,"d":"8.29E-47"},{"v":2.15e-44,"d":"2.15E-44"},"full_name=thioglucoside glucohydrolase 1. thioglucoside glucohydrolase 1. member of Glycoside Hydrolase Family 1. encodes one of two known functional myrosinase enzymes in Arabidopsis. The enzyme catalyzes the hydrolysis of glucosinolates into compounds that are toxic to various microbes and herbivores.","AT1G66270","BGLU21",6269,2.756,0.17438,15.804,2.91E-56,{"v":7.5e-54,"d":"7.50E-54"},"Glycosyl hydrolase superfamily protein. BGLU21 encodes a beta-glucosidase that has a high level of activity against the naturally occuring secondary metabolite scopolin. Recombinant BGLU21 produced in insect cells shows lower levels of activity using the structurally similar substrates esculin (33%) and 4-MU-glucoside (9%). BGLU21 is glycosylated in planta and has a C-terminal ER retention signal. Transcript analysis as well as protein extraction and western blotting from various plant organs suggest that BGLU21 is only present in roots and seedlings. Transcript levels increase in response to cold, auxin (2,4-D), and methyl jasmonate treatments.","AT4G19390",null,586.05,2.0343,0.17989,11.309,1.19E-29,3.01E-27,"Uncharacterized protein family (UPF0114)."]
["AT5G39890","PCO2",2344.8,-2.236,0.15723,-14.221,6.82E-46,{"v":1.74e-43,"d":"1.74E-43"},"2-aminoethanethiol dioxygenase, putative (DUF1637).","AT2G38380",null,547.66,-7.0883,0.45002,-15.751,{"v":6.77e-56,"d":"6.77E-56"},1.72E-53,"Peroxidase superfamily protein.","AT4G32920",null,711.17,1.8097,0.16038,11.284,{"v":1.58e-29,"d":"1.58E-29"},{"v":3.93e-27,"d":"3.93E-27"},"glycine-rich protein."]
["AT5G17220","GSTF12",645.64,3.1322,0.22146,14.144,2.05E-45,{"v":5.17e-43,"d":"5.17E-43"},"full_name=glutathione S-transferase phi 12. glutathione S-transferase phi 12. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). Mutants display no pigments on leaves and stems. Likely to function as a carrier to transport anthocyanin from the cytosol to tonoplasts.","AT5G26260",null,3549.7,2.5771,0.16383,15.73,{"v":9.4e-56,"d":"9.40E-56"},{"v":2.36e-53,"d":"2.36E-53"},"TRAF-like family protein.","AT5G17300","RVE1",178.47,5.4261,0.48143,11.271,{"v":1.83e-29,"d":"1.83E-29"},{"v":4.5e-27,"d":"4.50E-27"},"full_name=REVEILLE 1. Homeodomain-like superfamily protein. Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner."]
["AT3G45140","LOX2",2839.5,2.8097,0.19884,14.131,2.46E-45,{"v":6.13e-43,"d":"6.13E-43"},"full_name=lipoxygenase 2. lipoxygenase 2. Chloroplast lipoxygenase required for wound-induced jasmonic acid accumulation in Arabidopsis.Mutants are resistant to Staphylococcus aureus and accumulate salicylic acid upon infection.","AT1G62290","PASPA2",9177.3,-1.6516,0.10506,-15.72,{"v":1.11e-55,"d":"1.11E-55"},{"v":2.75e-53,"d":"2.75E-53"},"Saposin-like aspartyl protease family protein.","AT1G02640","BXL2",320.48,-2.5521,0.2269,-11.248,{"v":2.37e-29,"d":"2.37E-29"},5.77E-27,"full_name=beta-xylosidase 2. beta-xylosidase 2. encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members."]
["AT3G05020","ACP1",1475,-2.5833,0.18309,-14.109,{"v":3.33e-45,"d":"3.33E-45"},{"v":8.17e-43,"d":"8.17E-43"},"full_name=acyl carrier protein 1. acyl carrier protein 1. encodes an acyl carrier protein expressed in leaves, roots, and dry seeds. Protein is not regulated by light.","AT5G63030","GRXC1",2116.6,-1.9122,0.12223,-15.644,{"v":3.64e-55,"d":"3.64E-55"},8.91E-53,"full_name=glutaredoxin C1. Thioredoxin superfamily protein.","AT5G01600","FER1",4888.7,1.8794,0.16728,11.235,{"v":2.75e-29,"d":"2.75E-29"},{"v":6.59e-27,"d":"6.59E-27"},"full_name=ferretin 1. ferretin 1. Encodes a ferretin protein that is targeted to the chloroplast. Member of a Ferritin gene family. Gene expression is induced in response to iron overload and by nitric oxide. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress."]
["AT4G36250","ALDH3F1",1161.4,1.9153,0.13592,14.091,{"v":4.33e-45,"d":"4.33E-45"},1.05E-42,"full_name=aldehyde dehydrogenase 3F1. aldehyde dehydrogenase 3F1. Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures.","AT1G16880","ACR11",433.44,2.8794,0.18492,15.571,1.14E-54,{"v":2.76e-52,"d":"2.76E-52"},"full_name=ACT domain repeats 11. uridylyltransferase-like protein. Encodes a ACT domain-containing protein. The ACT domain, named after bacterial aspartate kinase, chorismate mutase and TyrA (prephenate dehydrogenase), is a regulatory domain that serves as an amino acid-binding site in feedback-regulated amino acid metabolic enzymes.","AT5G61820",null,351,2.8858,0.25706,11.226,3.03E-29,{"v":7.18e-27,"d":"7.18E-27"},"stress up-regulated Nod 19 protein."]
["AT4G16690","MES16",661.3,-2.0294,0.14438,-14.056,{"v":7.04e-45,"d":"7.04E-45"},{"v":1.69e-42,"d":"1.69E-42"},"full_name=methyl esterase 16. methyl esterase 16. Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on MeSA, MeGA4, or MEGA9 in vitro. Although MES16 is similar to MES17, a MeIAA hydrolase, two mes16 mutant lines (SALK_151578) and (SALK_139756) do not show altered sensitivity to MeIAA in root growth assays. MES16 transcripts appear to be more than 10-fold less abundant than those of MES17 in roots.","AT3G48140",null,361.01,3.107,0.19981,15.55,{"v":1.6E-54,"d":"1.60E-54"},{"v":3.81e-52,"d":"3.81E-52"},"B12D protein.","AT1G17830",null,507.1,2.1038,0.18784,11.2,{"v":4.1e-29,"d":"4.10E-29"},{"v":9.57e-27,"d":"9.57E-27"},"hypothetical protein (DUF789)."]
["AT4G02520","GSTF2",614.27,2.1104,0.15052,14.021,{"v":1.17e-44,"d":"1.17E-44"},{"v":2.76e-42,"d":"2.76E-42"},"full_name=glutathione S-transferase PHI 2. glutathione S-transferase PHI 2. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.","AT2G28490",null,616.86,-4.4183,0.28725,-15.381,{"v":2.18e-53,"d":"2.18E-53"},{"v":5.13e-51,"d":"5.13E-51"},"RmlC-like cupins superfamily protein.","AT3G52500",null,436.52,-2.1001,0.18768,-11.189,{"v":4.59e-29,"d":"4.59E-29"},1.06E-26,"Eukaryotic aspartyl protease family protein."]
["AT3G22400","LOX5",409.14,-3.4895,0.25103,-13.901,{"v":6.26e-44,"d":"6.26E-44"},{"v":1.45e-41,"d":"1.45E-41"},"PLAT/LH2 domain-containing lipoxygenase family protein. Encodes lipoxygenase5 (LOX5). LOX5 activity in roots facilitates green peach aphid colonization of Arabidopsis foliage by promoting green peach aphid feeding from sieve element and water consumption from xylem.","AT4G21280","PSBQA",861.53,2.022,0.13225,15.289,{"v":9.03e-53,"d":"9.03E-53"},{"v":2.1e-50,"d":"2.10E-50"},"full_name=photosystem II subunit QA. photosystem II subunit QA. Encodes the PsbQ subunit of the oxygen evolving complex of photosystem II.","AT2G40140","CZF1",542.73,1.9907,0.17884,11.131,{"v":8.87e-29,"d":"8.87E-29"},2.02E-26,"zinc finger (CCCH-type) family protein."]
["AT1G33790",null,4478.4,1.116,0.080286,13.901,{"v":6.28e-44,"d":"6.28E-44"},{"v":1.45e-41,"d":"1.45E-41"},"jacalin lectin family protein.","AT5G11740","AGP15",2984.4,-1.7365,0.11375,-15.267,1.28E-52,{"v":2.93e-50,"d":"2.93E-50"},"full_name=arabinogalactan protein 15. arabinogalactan protein 15. Encodes arabinogalactan protein (AGP15).","AT1G17230",null,263.63,2.6467,0.23882,11.082,{"v":1.53e-28,"d":"1.53E-28"},3.44E-26,"Leucine-rich receptor-like protein kinase family protein."]
["AT4G37300","MEE59",793.5,-1.8021,0.13024,-13.837,{"v":1.53e-43,"d":"1.53E-43"},{"v":3.49e-41,"d":"3.49E-41"},"full_name=maternal effect embryo arrest 59. maternal effect embryo arrest 59.","AT3G16430","JAL31",613.6,2.2717,0.15322,14.827,{"v":9.85e-50,"d":"9.85E-50"},2.24E-47,"full_name=jacalin-related lectin 31. jacalin-related lectin 31. Encodes a protein that increases the beta-glucosidase activities of three scopolin glucosidases in vitro.","AT2G36770",null,206.28,3.2663,0.29478,11.081,{"v":1.56e-28,"d":"1.56E-28"},3.46E-26,"UDP-Glycosyltransferase superfamily protein."]
["AT5G52920","PKP-BETA1",3548.6,-1.5359,0.11176,-13.743,{"v":5.57e-43,"d":"5.57E-43"},1.26E-40,"full_name=plastidic pyruvate kinase beta subunit 1. plastidic pyruvate kinase beta subunit 1. encodes a dominant chloroplast pyruvate kinase beta subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mutant plant has wrinkled seeds, with a 50-70% reduction in seed fatty acid content.","AT1G62510",null,4830.6,-2.3357,0.15796,-14.786,1.79E-49,{"v":4.02e-47,"d":"4.02E-47"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT4G25810","XTR6",142.61,5.4093,0.48987,11.042,2.39E-28,5.26E-26,"full_name=xyloglucan endotransglycosylase 6. xyloglucan endotransglycosylase 6. xyloglucan endotransglycosylase-related protein (XTR6)"]
["AT3G22840","ELIP1",1422.5,2.7384,0.19973,13.711,8.74E-43,1.94E-40,"full_name=EARLY LIGHT-INDUCABLE PROTEIN. Chlorophyll A-B binding family protein. Encodes an early light-inducible protein.","AT4G39730","PLAT1",2159.5,-1.93,0.1306,-14.778,{"v":2.03e-49,"d":"2.03E-49"},{"v":4.5E-47,"d":"4.50E-47"},"full_name=PLAT domain protein 1. Lipase/lipooxygenase, PLAT/LH2 family protein.","AT5G54160","OMT1",1117.8,-1.5618,0.14186,-11.01,{"v":3.44e-28,"d":"3.44E-28"},{"v":7.46e-26,"d":"7.46E-26"},"full_name=O-methyltransferase 1. O-methyltransferase 1. A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3?-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3?-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase"]
["AT3G15510","NAC2",475.83,-2.2612,0.16538,-13.672,{"v":1.49e-42,"d":"1.49E-42"},{"v":3.27e-40,"d":"3.27E-40"},"full_name=NAC domain containing protein 2. NAC domain containing protein 2. Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2.","AT1G65090",null,746.12,-3.4465,0.23397,-14.731,{"v":4.1e-49,"d":"4.10E-49"},{"v":8.97e-47,"d":"8.97E-47"},"nucleolin.","AT5G42050","NRP",2182.6,1.7216,0.15703,10.964,{"v":5.72e-28,"d":"5.72E-28"},1.23E-25,"DCD (Development and Cell Death) domain protein."]
["AT2G22660","ATGRDP1",2474.4,-1.7702,0.12972,-13.646,{"v":2.12e-42,"d":"2.12E-42"},{"v":4.61e-40,"d":"4.61E-40"},"DNA-binding protein, putative (duplicated DUF1399).","AT1G66280","BGLU22",2054.3,2.039,0.13881,14.689,{"v":7.57e-49,"d":"7.57E-49"},1.64E-46,"Glycosyl hydrolase superfamily protein.","AT5G50170",null,727.01,2.6703,0.24518,10.891,1.27E-27,{"v":2.7e-25,"d":"2.70E-25"},"C2 calcium/lipid-binding and GRAM domain containing protein."]
["AT2G42840","PDF1",8375.4,-1.2237,0.089957,-13.603,{"v":3.85e-42,"d":"3.85E-42"},{"v":8.27e-40,"d":"8.27E-40"},"full_name=protodermal factor 1. protodermal factor 1. Encodes a putative extracellular proline-rich protein is exclusively expressed in the L1 layer of vegetative, inflorescence and floral meristems and the protoderm of organ primordia.","AT4G28650","PXL2",192.55,4.4836,0.30834,14.541,{"v":6.68e-48,"d":"6.68E-48"},{"v":1.43e-45,"d":"1.43E-45"},"Leucine-rich repeat transmembrane protein kinase family protein. Encodes one of the two putative eLRR kinase closely related to PXY (At1g08590/PXL1 and At4g28650/PXL2). Insertion mutants in either pxl1 or pxl2 do not exhibit an obvious phenotype in the stem; double-mutant combinations of a Col allele, of pxy (pxy-3) with pxl1 and pxl2, generate a more severe vascular phenotype than pxy-3 alone, suggesting that these genes act synergistically with PXY in regulating vascular-tissue development in the stem.","AT1G77680","RRP44B",577.9,1.9395,0.1785,10.866,{"v":1.68e-27,"d":"1.68E-27"},{"v":3.53e-25,"d":"3.53E-25"},"Ribonuclease II/R family protein."]
["AT5G14995",null,263.21,-5.8217,0.42809,-13.599,{"v":4.04e-42,"d":"4.04E-42"},{"v":8.58e-40,"d":"8.58E-40"},"ECA1 gametogenesis related family protein. Encodes a ECA1 gametogenesis related family protein","AT5G14180","MPL1",515.12,-3.0622,0.21178,-14.459,{"v":2.19e-47,"d":"2.19E-47"},{"v":4.64e-45,"d":"4.64E-45"},"full_name=Myzus persicae-induced lipase 1. Myzus persicae-induced lipase 1.","AT1G15430",null,303.89,2.5331,0.23326,10.86,{"v":1.8e-27,"d":"1.80E-27"},3.73E-25,"hypothetical protein (DUF1644)."]
["AT1G74960","FAB1",1801.3,-1.617,0.11946,-13.536,9.63E-42,2.02E-39,"full_name=fatty acid biosynthesis 1. fatty acid biosynthesis 1. Encodes a plastidic beta-ketoacyl-ACP synthase II, involved in fatty acid elongation from 16:0-ACP to 18:0-ACP. Homozygous knock-out mutants are embryo lethal, indicating early embryo development is sensitive to elevated 16:0.","AT1G28290","AGP31",1489.5,1.7118,0.11953,14.321,{"v":1.62e-46,"d":"1.62E-46"},{"v":3.39e-44,"d":"3.39E-44"},"full_name=arabinogalactan protein 31. arabinogalactan protein 31. Encodes an atypical arabinogalactan protein that is localized to the plasma membrange. AGP31 is highly expressed in flowers and vascular tissue and is repressed by jasmonic acid. AGP31 may play a role in vascular tissue function during defense and development.","AT1G76790","IGMT5",1641.8,-1.446,0.13341,-10.839,2.26E-27,{"v":4.64e-25,"d":"4.64E-25"},"full_name=indole glucosinolate O-methyltransferase 5. O-methyltransferase family protein."]
["AT2G41280","M10",1157.5,2.9302,0.21722,13.49,{"v":1.8E-41,"d":"1.80E-41"},{"v":3.74e-39,"d":"3.74E-39"},"late embryogenesis abundant protein (M10) / LEA protein M10. Encodes a hydrophilic protein similar to Late Embryogenesis Activated (LEA) proteins expressed during embryogenesis, which are thought to be involved in the acquisition of dessication tolerance.","AT4G18970",null,269.64,3.3291,0.23298,14.289,{"v":2.56e-46,"d":"2.56E-46"},{"v":5.29e-44,"d":"5.29E-44"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT2G29450","GSTU5",1862.2,2.2679,0.20954,10.823,{"v":2.67e-27,"d":"2.67E-27"},{"v":5.41e-25,"d":"5.41E-25"},"full_name=glutathione S-transferase tau 5. glutathione S-transferase tau 5. Encodes a member of the TAU glutathione S-transferase gene family. Gene expression is induced by exposure to auxin, pathogen and herbicides. Naming convention according to Wagner et al. (2002)"]
["AT2G41290","SSL2",777.84,-2.4523,0.18201,-13.474,2.24E-41,{"v":4.6e-39,"d":"4.60E-39"},"full_name=strictosidine synthase-like 2. strictosidine synthase-like 2. Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.","AT3G28220",null,1684.7,2.1141,0.14807,14.278,{"v":3.01e-46,"d":"3.01E-46"},{"v":6.16e-44,"d":"6.16E-44"},"TRAF-like family protein.","AT3G12320","LNK3",217.59,2.8379,0.2623,10.819,{"v":2.79e-27,"d":"2.79E-27"},{"v":5.61e-25,"d":"5.61E-25"},"hypothetical protein."]
["AT1G22710","SUC2",1958.7,-1.6534,0.12277,-13.467,2.44E-41,{"v":4.97e-39,"d":"4.97E-39"},"full_name=sucrose-proton symporter 2. sucrose-proton symporter 2. Encodes for a high-affinity transporter essential for phloem loading and long-distance transport. A major sucrose transporter, AtSUC2 can also transport a wide range of physiological and synthetic glucose conjugates with both &#945;- or &#946;-linkage.","AT1G75750","GASA1",291.34,-5.6497,0.39689,-14.235,{"v":5.56e-46,"d":"5.56E-46"},{"v":1.13e-43,"d":"1.13E-43"},"full_name=GAST1 protein homolog 1. GAST1 protein homolog 1. GA-responsive GAST1 protein homolog regulated by BR and GA antagonistically. Possibly involved in cell elongation based on expression data","AT1G54010","GLL23",8161.8,-1.2277,0.1139,-10.778,{"v":4.36e-27,"d":"4.36E-27"},{"v":8.65e-25,"d":"8.65E-25"},"GDSL-like Lipase/Acylhydrolase superfamily protein."]
["AT1G55490","CPN60B",6281.7,1.4703,0.10964,13.41,{"v":5.25e-41,"d":"5.25E-41"},1.06E-38,"full_name=chaperonin 60 beta. chaperonin 60 beta. encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. The protein has molecular chaperone activity for suppressing protein aggregation in vitro.","AT1G19570","DHAR1",6814.9,-1.7607,0.12395,-14.205,{"v":8.5e-46,"d":"8.50E-46"},{"v":1.7E-43,"d":"1.70E-43"},"full_name=dehydroascorbate reductase. dehydroascorbate reductase. Encodes a member of the dehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica.","AT4G21680","NRT1.8",200.7,2.9389,0.27348,10.746,{"v":6.17e-27,"d":"6.17E-27"},{"v":1.21e-24,"d":"1.21E-24"},"full_name=NITRATE TRANSPORTER 1.8. NITRATE TRANSPORTER 1.8. Encodes a nitrate transporter (NRT1.8). Functions in nitrate removal from the xylem sap. Mediates cadmium tolerance."]
["AT1G53380",null,433.42,-3.4024,0.25381,-13.406,{"v":5.6e-41,"d":"5.60E-41"},1.11E-38,"hypothetical protein (DUF641).","AT5G39320","UDG4",553.37,2.9041,0.20619,14.085,{"v":4.72e-45,"d":"4.72E-45"},{"v":9.36e-43,"d":"9.36E-43"},"full_name=UDP-glucose dehydrogenase 4. UDP-glucose 6-dehydrogenase family protein.","AT3G11410","PP2CA",1480.1,1.8599,0.17317,10.74,{"v":6.61e-27,"d":"6.61E-27"},1.28E-24,"full_name=protein phosphatase 2CA. protein phosphatase 2CA. Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA."]
["AT1G20630","CAT1",2290,-1.3065,0.097637,-13.381,{"v":7.77e-41,"d":"7.77E-41"},1.53E-38,"full_name=catalase 1. catalase 1. Catalyzes the reduction of hydrogen peroxide using heme group as cofactor. Protects cells from toxicity by H2O2.","AT5G64080","XYP1",1192.3,-2.1563,0.15327,-14.069,{"v":5.9e-45,"d":"5.90E-45"},{"v":1.16e-42,"d":"1.16E-42"},"full_name=xylogen protein 1. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT1G76590","PLATZ2",542.54,3.0994,0.2889,10.728,7.49E-27,1.44E-24,"PLATZ transcription factor family protein."]
["AT1G56170","NF-YC2",835.76,-1.8769,0.14043,-13.366,{"v":9.62e-41,"d":"9.62E-41"},{"v":1.88e-38,"d":"1.88E-38"},"full_name=nuclear factor Y, subunit C2. nuclear factor Y, subunit C2. Encodes a protein with similarity to a subunit of the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5B) and expressed in vegetative and reproductive tissues","AT5G38430","RBCS1B",1750.6,2.0172,0.14345,14.062,{"v":6.47e-45,"d":"6.47E-45"},1.26E-42,"full_name=Rubisco small subunit 1B. Ribulose bisphosphate carboxylase (small chain) family protein. Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410).","AT4G31500","CYP83B1",329.67,-2.8012,0.26113,-10.727,{"v":7.61e-27,"d":"7.61E-27"},{"v":1.45e-24,"d":"1.45E-24"},"full_name=cytochrome P450, family 83, subfamily B, polypeptide 1. cytochrome P450, family 83, subfamily B, polypeptide 1. Encodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction."]
["AT1G78850","MBL1",530.08,3.1146,0.23365,13.33,{"v":1.54e-40,"d":"1.54E-40"},2.98E-38,"D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein. curculin-like (mannose-binding) lectin family protein, low similarity to ser/thr protein kinase from Zea mays (GI:2598067); contains Pfam lectin (probable mannose binding) domain PF01453 but not the protein kinase domain of the Z. mays protein","AT4G35770","SEN1",496.75,3.3247,0.23749,13.999,1.57E-44,3.02E-42,"full_name=SENESCENCE 1. Rhodanese/Cell cycle control phosphatase superfamily protein. Senescence-associated gene that is strongly induced by phosphate starvation. Transcripts are differentially regulated at the level of mRNA stability at different times of day. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant.","AT1G37130","NIA2",147.24,4.7646,0.44485,10.711,{"v":9.07e-27,"d":"9.07E-27"},{"v":1.71e-24,"d":"1.71E-24"},"full_name=nitrate reductase 2. nitrate reductase 2. Identified as a mutant resistant to chlorate. Encodes nitrate reductase structural gene. Involved in nitrate assimilation. Has nitrate reductase activity. Up-regulated by the fungus P. indica. Binds transcription factor At2g35940."]
["AT4G14040","SBP2",790.91,-1.924,0.14462,-13.304,2.21E-40,{"v":4.22e-38,"d":"4.22E-38"},"full_name=selenium-binding protein 2. selenium-binding protein 2.","AT3G16450","JAL33",936.7,2.5288,0.18112,13.962,{"v":2.66e-44,"d":"2.66E-44"},{"v":5.07e-42,"d":"5.07E-42"},"full_name=Jacalin-related lectin 33. Mannose-binding lectin superfamily protein.","AT5G53460","GLT1",1598,1.6639,0.1558,10.68,1.27E-26,{"v":2.37e-24,"d":"2.37E-24"},"full_name=NADH-dependent glutamate synthase 1. NADH-dependent glutamate synthase 1. NADH-dependent glutamate synthase"]
["AT2G34870","MEE26",382.7,-2.4035,0.1813,-13.257,{"v":4.13e-40,"d":"4.13E-40"},7.81E-38,"full_name=maternal effect embryo arrest 26. hydroxyproline-rich glycoprotein family protein.","AT1G04040",null,382.03,3.1899,0.22937,13.907,{"v":5.73e-44,"d":"5.73E-44"},1.08E-41,"HAD superfamily, subfamily IIIB acid phosphatase.","AT3G20370",null,1099.2,-1.8671,0.17574,-10.624,{"v":2.3e-26,"d":"2.30E-26"},{"v":4.25e-24,"d":"4.25E-24"},"TRAF-like family protein."]
["AT5G02500","HSC70-1",37355,1.153,0.087087,13.239,{"v":5.21e-40,"d":"5.21E-40"},9.76E-38,"full_name=heat shock cognate protein 70-1. heat shock cognate protein 70-1. encodes a member of heat shock protein 70 family.","AT5G66570","PSBO1",3382.1,1.9596,0.14179,13.821,1.91E-43,{"v":3.54e-41,"d":"3.54E-41"},"full_name=PS II oxygen-evolving complex 1. PS II oxygen-evolving complex 1. Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In <i>Arabidopsis thaliana</i> the PsbO proteins are encoded by two genes: <i>psbO1</i> and <i>psbO2</i>. PsbO1 is the major isoform in the wild-type. In plsp1-1 mutant plastids, the nonmature form of the protein localizes in the membrane.","AT1G54575",null,402.69,2.39,0.22659,10.548,{"v":5.21e-26,"d":"5.21E-26"},{"v":9.52e-24,"d":"9.52E-24"},"hypothetical protein."]
["AT2G44460","BGLU28",358.52,7.6258,0.57714,13.213,{"v":7.38e-40,"d":"7.38E-40"},{"v":1.37e-37,"d":"1.37E-37"},"full_name=beta glucosidase 28. beta glucosidase 28.","AT4G21680","NRT1.8",320.89,-3.2327,0.23391,-13.82,{"v":1.92e-43,"d":"1.92E-43"},{"v":3.54e-41,"d":"3.54E-41"},"full_name=NITRATE TRANSPORTER 1.8. NITRATE TRANSPORTER 1.8. Encodes a nitrate transporter (NRT1.8). Functions in nitrate removal from the xylem sap. Mediates cadmium tolerance.","AT4G39800","MIPS1",693.04,2.4668,0.23474,10.509,{"v":7.88e-26,"d":"7.88E-26"},1.43E-23,"full_name=D-myo-Inositol 3-Phosphate Synthase 1. myo-inositol-1-phosphate synthase 1. ** Referred to as MIPS2 in Mitsuhashi et al 2008. myo-inositol-1-phosphate synthase isoform 1.Expressed in leaf, root and silique. Immunolocalization experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization."]
["AT3G50330","HEC2",199.7,4.7382,0.35958,13.177,1.19E-39,2.18E-37,"full_name=HECATE 2. basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT1G62710","BETA-VPE",2306,-2.0321,0.14744,-13.782,3.25E-43,{"v":5.95e-41,"d":"5.95E-41"},"full_name=beta vacuolar processing enzyme. beta vacuolar processing enzyme. Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins.","AT3G09600","RVE8",159.74,3.2887,0.31423,10.466,{"v":1.24e-25,"d":"1.24E-25"},{"v":2.23e-23,"d":"2.23E-23"},"full_name=REVEILLE 8. Homeodomain-like superfamily protein. Encodes a MYB-like transcription factor similar to CIRCADIAN CLOCK-ASSOCIATED1 (CCA1) and ELONGATED HYPOCOTYL (LHY). Involved in the regulation of circadian clock by modulating the pattern of histone 3 (H3) acetylation."]
["AT1G01090","PDH-E1 ALPHA",2459.1,-1.2953,0.098361,-13.169,1.32E-39,{"v":2.4e-37,"d":"2.40E-37"},"full_name=pyruvate dehydrogenase E1 alpha. pyruvate dehydrogenase E1 alpha. pyruvate dehydrogenase E1 alpha subunit","AT4G03210","XTH9",347.11,3.3445,0.24278,13.776,{"v":3.57e-43,"d":"3.57E-43"},{"v":6.47e-41,"d":"6.47E-41"},"full_name=xyloglucan endotransglucosylase/hydrolase 9. xyloglucan endotransglucosylase/hydrolase 9. encodes a member of xyloglucan endotransglucosylase/hydrolases (XTHs) that catalyze the cleavage and molecular grafting of xyloglucan chains function in loosening and rearrangement of the cell wall. Gene is expressed in shoot apex region, flower buds, flower stalks and internodes bearing flowers.","AT4G10265","WIP3",191.79,-3.0072,0.28857,-10.421,{"v":1.99e-25,"d":"1.99E-25"},{"v":3.53e-23,"d":"3.53E-23"},"Wound-responsive family protein."]
["AT3G44990","XTH31",265.22,4.2898,0.32643,13.142,{"v":1.9e-39,"d":"1.90E-39"},3.43E-37,"full_name=XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31. xyloglucan endo-transglycosylase-related 8. Encodes a xyloglucan endotransglycosylase/hydrolase.","AT1G09780","iPGAM1",1037.6,1.839,0.13425,13.698,1.05E-42,{"v":1.88e-40,"d":"1.88E-40"},"full_name=2,3-biphosphoglycerate-independent phosphoglycerate mutase 1. Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent. Encodes a 2,3-biphosphoglycerate-independent phosphoglycerate mutase that is involved in pollen development and stomatal movement.","AT2G38820",null,352.05,2.2653,0.21789,10.397,{"v":2.57e-25,"d":"2.57E-25"},{"v":4.52e-23,"d":"4.52E-23"},"DNA-directed RNA polymerase subunit beta-beta protein, putative (DUF506)."]
["AT3G12580","HSP70",3220.2,1.4227,0.10843,13.12,2.51E-39,4.48E-37,"full_name=heat shock protein 70. heat shock protein 70.","AT2G05070","LHCB2.2",262.77,3.5224,0.25752,13.678,{"v":1.37e-42,"d":"1.37E-42"},2.43E-40,"full_name=photosystem II light harvesting complex gene 2.2. photosystem II light harvesting complex protein 2.2. Encodes Lhcb2.2. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus.","AT5G47560","TDT",845.95,2.1849,0.2103,10.389,2.77E-25,4.82E-23,"full_name=tonoplast dicarboxylate transporter. tonoplast dicarboxylate transporter. Encodes a tonoplast malate/fumarate transporter."]
["AT4G15396","CYP702A6",384.87,-2.7149,0.2077,-13.072,{"v":4.78e-39,"d":"4.78E-39"},{"v":8.45e-37,"d":"8.45E-37"},"full_name=cytochrome P450, family 702, subfamily A, polypeptide 6. cytochrome P450, family 702, subfamily A, polypeptide 6. a member of the cytochrome P450 family. molecular function unknown.","AT3G16420","PBP1",11489,1.3757,0.10074,13.656,1.86E-42,{"v":3.28e-40,"d":"3.28E-40"},"full_name=PYK10-binding protein 1. PYK10-binding protein 1. The PBP1(PYK10-binding protein 1) assists the PYK10 (beta-glucosidase complex) in its activity and may act like a molecular chaperone that facilitates the correct polymerization of PYK10, when tissues are damaged and subcellular structures are destroyed by pests.","AT2G22240","MIPS2",548.31,2.1767,0.21011,10.36,{"v":3.77e-25,"d":"3.77E-25"},{"v":6.51e-23,"d":"6.51E-23"},"full_name=myo-inositol-1-phosphate synthase 2. myo-inositol-1-phosphate synthase 2. ** Referred to as MIPS1 in Mitsuhashi et al 2008. Myo-inositol-1-phosphate synthase isoform 2. Expressed in leaf, root and silique. Immunolocalization experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization."]
["AT5G52310","LTI78",586.89,1.9977,0.15297,13.06,{"v":5.58e-39,"d":"5.58E-39"},9.78E-37,"full_name=LOW-TEMPERATURE-INDUCED 78. low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A). cold regulated gene, the 5' region of cor78 has cis-acting regulatory elements that can impart cold-regulated gene expression","AT3G04720","PR4",440.87,-2.8836,0.21169,-13.622,{"v":2.97e-42,"d":"2.97E-42"},{"v":5.18e-40,"d":"5.18E-40"},"full_name=pathogenesis-related 4. pathogenesis-related 4. Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection.","AT4G36850",null,467.85,2.0685,0.20036,10.324,{"v":5.5E-25,"d":"5.50E-25"},{"v":9.4e-23,"d":"9.40E-23"},"PQ-loop repeat family protein / transmembrane family protein."]
["AT2G05990","MOD1",1768.7,-1.3967,0.10703,-13.05,6.37E-39,1.11E-36,"full_name=MOSAIC DEATH 1. NAD(P)-binding Rossmann-fold superfamily protein. Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves.","AT4G15390",null,278.99,-3.9916,0.29346,-13.602,{"v":3.9e-42,"d":"3.90E-42"},{"v":6.74e-40,"d":"6.74E-40"},"HXXXD-type acyl-transferase family protein.","AT3G51860","CAX3",537.87,1.8843,0.18259,10.32,{"v":5.74e-25,"d":"5.74E-25"},{"v":9.72e-23,"d":"9.72E-23"},"full_name=cation exchanger 3. cation exchanger 3."]
["AT5G54770","THI1",43781,-1.2294,0.094386,-13.025,{"v":8.78e-39,"d":"8.78E-39"},{"v":1.51e-36,"d":"1.51E-36"},"thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4). Encodes a thiamine biosynthetic gene that has a dual function in thiamine biosynthesis and mitochondrial DNA damage tolerance. It appears to be involved in producing the thiazole portion of thiamine (vitamin B1). A crystal structure of the protein reveals that it forms a 2-ring homo-octamer.","AT3G03470","CYP89A9",367.11,-2.8192,0.20747,-13.588,{"v":4.7e-42,"d":"4.70E-42"},{"v":8.05e-40,"d":"8.05E-40"},"full_name=cytochrome P450, family 87, subfamily A, polypeptide 9. cytochrome P450, family 87, subfamily A, polypeptide 9. member of CYP89A","AT4G38810","SCS",1524.6,2.0793,0.20155,10.317,{"v":5.91e-25,"d":"5.91E-25"},{"v":9.93e-23,"d":"9.93E-23"},"Calcium-binding EF-hand family protein."]
["AT5G07500","PEI1",306.9,-3.8228,0.29407,-13,{"v":1.23e-38,"d":"1.23E-38"},{"v":2.09e-36,"d":"2.09E-36"},"Zinc finger C-x8-C-x5-C-x3-H type family protein. Encodes an embryo-specific zinc finger transcription factor required for heart-stage embryo formation.","AT1G09310",null,372.87,2.8284,0.20823,13.583,{"v":5.06e-42,"d":"5.06E-42"},{"v":8.59e-40,"d":"8.59E-40"},"plant/protein (Protein of unknown function, DUF538).","AT4G36010",null,457.3,2.7035,0.26211,10.314,{"v":6.08e-25,"d":"6.08E-25"},1.01E-22,"Pathogenesis-related thaumatin superfamily protein."]
["AT1G03790","SOM",990.56,1.5609,0.12017,12.989,{"v":1.4E-38,"d":"1.40E-38"},{"v":2.37e-36,"d":"2.37E-36"},"full_name=SOMNUS. Zinc finger C-x8-C-x5-C-x3-H type family protein. Encodes SOMNUS (SOM), a nucleus-localized CCCH-type zinc finger protein. SOM negatively regulates light-dependent seed germination downstream of PIL5 (AT2G20180).","AT1G20020","FNR2",767.51,1.9374,0.14335,13.515,{"v":1.28e-41,"d":"1.28E-41"},2.15E-39,"full_name=ferredoxin-NADP(+)-oxidoreductase 2. ferredoxin-NADP[+]-oxidoreductase 2. Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the stroma","AT2G34850","MEE25",460.43,2.5955,0.25176,10.309,{"v":6.39e-25,"d":"6.39E-25"},1.05E-22,"full_name=maternal effect embryo arrest 25. NAD(P)-binding Rossmann-fold superfamily protein."]
["AT5G05250",null,1675.2,-1.2985,0.10008,-12.975,{"v":1.7e-38,"d":"1.70E-38"},{"v":2.85e-36,"d":"2.85E-36"},"hypothetical protein.","AT3G16370",null,242.11,3.9798,0.29507,13.488,1.84E-41,{"v":3.07e-39,"d":"3.07E-39"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT5G47020",null,983.49,1.6343,0.15855,10.308,{"v":6.5E-25,"d":"6.50E-25"},{"v":1.06e-22,"d":"1.06E-22"},"MraZ."]
["AT2G43520","TI2",2872.7,-1.9238,0.14849,-12.956,{"v":2.18e-38,"d":"2.18E-38"},{"v":3.62e-36,"d":"3.62E-36"},"full_name=trypsin inhibitor protein 2. trypsin inhibitor protein 2. Encodes putative trypsin inhibitor protein which may function in defense against herbivory. Member of the defensin-like (DEFL) family.","AT5G43830",null,695.78,1.9176,0.14279,13.429,{"v":4.07e-41,"d":"4.07E-41"},6.73E-39,"aluminum induced protein with YGL and LRDR motifs.","AT2G15880","LRX10",1419.2,1.635,0.1588,10.296,{"v":7.33e-25,"d":"7.33E-25"},{"v":1.19e-22,"d":"1.19E-22"},"Leucine-rich repeat (LRR) family protein."]
["AT1G73680","ALPHA DOX2",1763,-1.7684,0.13654,-12.951,{"v":2.32e-38,"d":"2.32E-38"},{"v":3.78e-36,"d":"3.78E-36"},"full_name=alpha dioxygenase. alpha dioxygenase. Encodes an alpha dioxygenase. Recombinant protein catalyzes the conversion of a wide range of fatty acids into 2(R)-hydroperoxy derivatives.","AT3G63040",null,413.78,-5.7933,0.43248,-13.395,{"v":6.43e-41,"d":"6.43E-41"},{"v":1.05e-38,"d":"1.05E-38"},"hypothetical protein.","AT4G17840","BCM4",310.53,2.3533,0.22939,10.259,{"v":1.08e-24,"d":"1.08E-24"},{"v":1.74e-22,"d":"1.74E-22"},"CAAX protease self-immunity protein."]
["AT5G47550","CYS5",3010.5,-1.4012,0.10819,-12.951,{"v":2.32e-38,"d":"2.32E-38"},{"v":3.78e-36,"d":"3.78E-36"},"Cystatin/monellin superfamily protein.","AT1G72970","HTH",414.71,2.3807,0.17788,13.383,7.58E-41,{"v":1.23e-38,"d":"1.23E-38"},"full_name=HOTHEAD. Glucose-methanol-choline (GMC) oxidoreductase family protein. Originally identified as a mutation that causes floral organs to fuse together. About 10-20% of mutants also have defects in ovules. Mutants have reduced fertility most likely as because of fusions that pistil emergence. The protein has similarity to the mandelonitrile lyase family of FAD containing oxidoreductases and is predicted to be secreted (SignalP).It is expressed in all tissue layers of roots, inflorescences, stems, leaves, and flowers and is also expressed in siliques. Expression is highest in inflorescence and flower tissue.Transmission of mutant alleles to the progeny shows non mendelian segregation- a percentage of mutant alleles revert back to a previous parental (e.g. grandparental) wild type allele. It has been suggested that an RNA template driven or other extra-DNA genomic mechanism may be responsible for the non-mendelian inheritance of HTH. Reversion events in alleles at other loci have also been observed to occur in plants with an hth mutant background indicating a genome wide effect.","AT4G32770","VTE1",808.66,1.9426,0.18984,10.233,1.41E-24,{"v":2.25e-22,"d":"2.25E-22"},"full_name=VITAMIN E DEFICIENT 1. tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1). Tocopherol cyclase involved in tocopherol (vitamin E)synthesis. VTE1 over-expressing plants have increased tocopherol indicating VTE1 is a major limiting factor in tocopherol synthesis. Mutants defective in this gene accumulate high amounts of zeaxanthin in conditions of high light or low temperature. Plays a role in the adaptation to low temperature stress, notably phloem loading."]
["AT1G28400",null,771.82,-1.993,0.15412,-12.932,{"v":2.99e-38,"d":"2.99E-38"},{"v":4.83e-36,"d":"4.83E-36"},"GATA zinc finger protein.","AT2G47180","GolS1",372.6,-2.9121,0.21769,-13.377,{"v":8.21e-41,"d":"8.21E-41"},{"v":1.32e-38,"d":"1.32E-38"},"full_name=galactinol synthase 1. galactinol synthase 1. GolS1 is a galactinol synthase that catalyzes the formation of galactinol from UDP-galactose and myo-inositol. GolS1 transcript levels rise in response to methyl viologen, an oxidative damage-inducing agent. Plants over-expressing GolS1 have increased tolerance to salt, chilling, and high-light stress.","AT4G11040","RDO5",497.02,2.3472,0.23084,10.168,{"v":2.75e-24,"d":"2.75E-24"},{"v":4.32e-22,"d":"4.32E-22"},"Protein phosphatase 2C family protein. Encodes a nuclear localized protein with sequence similarity to PP2C phosphatases that is involved in seed dormancy. Loss of function mutations have reduced seed dormancy but does not act through ABA or DOG1 pathways."]
["AT4G39800","MIPS1",1993.3,-2.183,0.16895,-12.921,{"v":3.42e-38,"d":"3.42E-38"},{"v":5.48e-36,"d":"5.48E-36"},"full_name=D-myo-Inositol 3-Phosphate Synthase 1. myo-inositol-1-phosphate synthase 1. ** Referred to as MIPS2 in Mitsuhashi et al 2008. myo-inositol-1-phosphate synthase isoform 1.Expressed in leaf, root and silique. Immunolocalization experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.","AT5G20700",null,666.57,1.9205,0.14382,13.354,{"v":1.12e-40,"d":"1.12E-40"},{"v":1.79e-38,"d":"1.79E-38"},"senescence-associated family protein, putative (DUF581).","AT4G30210","ATR2",1167.5,1.4233,0.13998,10.168,{"v":2.76e-24,"d":"2.76E-24"},{"v":4.32e-22,"d":"4.32E-22"},"full_name=P450 reductase 2. P450 reductase 2. Encodes NADPH-cytochrome P450 reductase that catalyzes the first oxidative step of the phenylpropanoid general pathway."]
["AT5G13170","SAG29",1063.5,-1.7308,0.13412,-12.905,{"v":4.23e-38,"d":"4.23E-38"},{"v":6.72e-36,"d":"6.72E-36"},"full_name=senescence-associated gene 29. senescence-associated gene 29. Encodes a member of the SWEET sucrose efflux transporter family proteins.","AT5G45830","DOG1",328.12,-4.0555,0.30374,-13.352,1.15E-40,{"v":1.83e-38,"d":"1.83E-38"},"full_name=DELAY OF GERMINATION 1. delay of germination 1. Encodes DOG1 (DELAY OF GERMINATION 1). A quantitative trait locus involved in the control of seed dormancy. Belongs to a novel plant-specific gene family whose members include: DOG1-like 1-4 (DOGL1-4, At4g18660, At4g18680, At4g18690, At4g18650 respectively) and DOG1. DOG1 expression is seed-specific.","AT1G55850","CSLE1",1112.7,1.5492,0.15249,10.16,{"v":3E-24,"d":"3.00E-24"},{"v":4.66e-22,"d":"4.66E-22"},"full_name=cellulose synthase like E1. cellulose synthase like E1. encodes a protein similar to cellulose synthase"]
["AT5G20720","CPN20",4925.7,1.0468,0.081292,12.877,{"v":6.03e-38,"d":"6.03E-38"},9.51E-36,"full_name=chaperonin 20. chaperonin 20. Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES.","AT1G69410","ELF5A-3",2263.6,-1.7034,0.12794,-13.314,{"v":1.91e-40,"d":"1.91E-40"},{"v":3e-38,"d":"3.00E-38"},"full_name=eukaryotic elongation factor 5A-3. eukaryotic elongation factor 5A-3. Encodes eIF5A-2, a putative eukaryotic translation initiation factor. There are three eIF5A coding genes in Arabidopsis: eIF5A-1/At1g13950, eIF5A-2/At1g26630 and eIF5A-3/At1g69410.","AT5G67510",null,434.37,-1.8806,0.18515,-10.157,{"v":3.09e-24,"d":"3.09E-24"},{"v":4.75e-22,"d":"4.75E-22"},"Translation protein SH3-like family protein."]
["AT3G16400","NSP1",3533.5,1.3776,0.10706,12.867,{"v":6.86e-38,"d":"6.86E-38"},{"v":1.07e-35,"d":"1.07E-35"},"full_name=nitrile specifier protein 1. nitrile specifier protein 1. Encodes a nitrile-specifier protein NSP1 responsible for constitutive and herbivore-induced simple nitrile formation in rosette leaves. NSP1 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation.","AT1G29920","CAB2",2126.4,1.9162,0.14403,13.304,{"v":2.19e-40,"d":"2.19E-40"},{"v":3.41e-38,"d":"3.41E-38"},"full_name=chlorophyll A/B-binding protein 2. chlorophyll A/B-binding protein 2. Encodes lhcb1.1 a component of the LHCIIb light harvesting complex associated with photosystem II.","AT4G03210","XTH9",275.12,-2.6261,0.2589,-10.143,{"v":3.55e-24,"d":"3.55E-24"},{"v":5.42e-22,"d":"5.42E-22"},"full_name=xyloglucan endotransglucosylase/hydrolase 9. xyloglucan endotransglucosylase/hydrolase 9. encodes a member of xyloglucan endotransglucosylase/hydrolases (XTHs) that catalyze the cleavage and molecular grafting of xyloglucan chains function in loosening and rearrangement of the cell wall. Gene is expressed in shoot apex region, flower buds, flower stalks and internodes bearing flowers."]
["AT4G02360",null,3607.7,-1.2869,0.10015,-12.85,{"v":8.56e-38,"d":"8.56E-38"},{"v":1.33e-35,"d":"1.33E-35"},"transmembrane protein, putative (Protein of unknown function, DUF538).","AT5G09510",null,1739,1.4404,0.10831,13.298,{"v":2.37e-40,"d":"2.37E-40"},{"v":3.66e-38,"d":"3.66E-38"},"Ribosomal protein S19 family protein.","AT1G22710","SUC2",624.71,1.7178,0.16953,10.133,{"v":3.95e-24,"d":"3.95E-24"},{"v":5.99e-22,"d":"5.99E-22"},"full_name=sucrose-proton symporter 2. sucrose-proton symporter 2. Encodes for a high-affinity transporter essential for phloem loading and long-distance transport. A major sucrose transporter, AtSUC2 can also transport a wide range of physiological and synthetic glucose conjugates with both &#945;- or &#946;-linkage."]
["AT1G68530","KCS6",901.18,-2.3068,0.17969,-12.838,{"v":1e-37,"d":"1.00E-37"},{"v":1.54e-35,"d":"1.54E-35"},"full_name=3-ketoacyl-CoA synthase 6. 3-ketoacyl-CoA synthase 6. Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT4G09030","AGP10",1015.9,-2.4711,0.18634,-13.261,{"v":3.91e-40,"d":"3.91E-40"},{"v":5.99e-38,"d":"5.99E-38"},"full_name=arabinogalactan protein 10. arabinogalactan protein 10. Encodes arabinogalactan protein (AGP10).","AT1G51500","ABCG12",562.84,1.7428,0.17231,10.114,{"v":4.76e-24,"d":"4.76E-24"},{"v":7.12e-22,"d":"7.12E-22"},"full_name=ATP-binding cassette G12. ABC-2 type transporter family protein. Encodes an ABC transporter involved in cuticular wax biosynthesis. Lines carrying recessive mutations in this locus have weakly glaucous stem surface, and relative elevated secondary alcohols and ketones."]
["AT4G33560","WIP5",967.67,-3.2133,0.25065,-12.82,{"v":1.27e-37,"d":"1.27E-37"},{"v":1.94e-35,"d":"1.94E-35"},"Wound-responsive family protein.","AT4G20320","CTPS4",449.13,2.4218,0.18278,13.25,{"v":4.54e-40,"d":"4.54E-40"},{"v":6.9e-38,"d":"6.90E-38"},"CTP synthase family protein.","AT5G20830","SUS1",258.84,2.621,0.25915,10.114,{"v":4.78e-24,"d":"4.78E-24"},{"v":7.12e-22,"d":"7.12E-22"},"full_name=sucrose synthase 1. sucrose synthase 1. Encodes a protein with sucrose synthase activity (SUS1)."]
["AT3G61310","AHL11",712.29,-1.8523,0.14466,-12.804,1.56E-37,2.36E-35,"AT hook motif DNA-binding family protein.","AT5G13630","GUN5",885.86,2.0408,0.1544,13.218,{"v":6.92e-40,"d":"6.92E-40"},1.04E-37,"full_name=GENOMES UNCOUPLED 5. magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH). Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.","AT1G24580",null,303.67,2.3116,0.22879,10.104,{"v":5.32e-24,"d":"5.32E-24"},7.86E-22,"RING/U-box superfamily protein."]
["AT1G77760","NIA1",1083.9,-1.9176,0.15027,-12.761,{"v":2.72e-37,"d":"2.72E-37"},{"v":4.08e-35,"d":"4.08E-35"},"full_name=nitrate reductase 1. nitrate reductase 1. Encodes the cytosolic minor isoform of nitrate reductase (NR). Involved in the first step of nitrate assimilation, it contributes about 15% of the nitrate reductase activity in shoots. Similar to molybdopterin oxidoreductases at the N-terminus, and to FAD/NAD-binding cytochrome reductases at the C-terminus. Cofactors: FAD, heme iron (cytochrome B-557), and molybdenum-pterin.","AT1G06360",null,210.96,3.2741,0.24788,13.208,{"v":7.84e-40,"d":"7.84E-40"},1.17E-37,"Fatty acid desaturase family protein.","AT1G03790","SOM",544.13,1.8066,0.17961,10.059,{"v":8.41e-24,"d":"8.41E-24"},1.23E-21,"full_name=SOMNUS. Zinc finger C-x8-C-x5-C-x3-H type family protein. Encodes SOMNUS (SOM), a nucleus-localized CCCH-type zinc finger protein. SOM negatively regulates light-dependent seed germination downstream of PIL5 (AT2G20180)."]
["AT4G22880","LDOX",696.27,3.4219,0.26877,12.732,{"v":3.93e-37,"d":"3.93E-37"},{"v":5.86e-35,"d":"5.86E-35"},"full_name=leucoanthocyanidin dioxygenase. leucoanthocyanidin dioxygenase. encodes leucoanthocyanidin dioxygenase, which is involved in proanthocyanin biosynthesis. Mutant analysis suggests that this gene is also involved in vacuole formation.","AT2G39730","RCA",2180.2,1.627,0.12336,13.188,{"v":1.02e-39,"d":"1.02E-39"},1.52E-37,"full_name=rubisco activase. rubisco activase. Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco. Involved in jasmonate-induced leaf senescence.","AT2G32800","AP4.3A",153.22,3.464,0.3448,10.046,{"v":9.53e-24,"d":"9.53E-24"},1.39E-21,"protein kinase family protein."]
["AT1G03630","POR C",415.17,2.6752,0.21023,12.725,{"v":4.27e-37,"d":"4.27E-37"},{"v":6.32e-35,"d":"6.32E-35"},"full_name=protochlorophyllide oxidoreductase C. protochlorophyllide oxidoreductase C. Encodes for a protein with protochlorophyllide oxidoreductase activity. The enzyme is NADPH- and light-dependent.","AT5G20960","AO1",1049.6,-2.099,0.15935,-13.172,{"v":1.27e-39,"d":"1.27E-39"},1.86E-37,"full_name=aldehyde oxidase 1. aldehyde oxidase 1. Encodes aldehyde oxidase AA01.","AT5G45670",null,340.31,-2.8019,0.28013,-10.002,1.49E-23,{"v":2.15e-21,"d":"2.15E-21"},"GDSL-like Lipase/Acylhydrolase superfamily protein."]
["AT3G16950","LPD1",699.28,-2.1648,0.1706,-12.69,{"v":6.76e-37,"d":"6.76E-37"},{"v":9.91e-35,"d":"9.91E-35"},"full_name=lipoamide dehydrogenase 1. lipoamide dehydrogenase 1. encodes a plastid lipoamide dehydrogenase, subunit of the pyruvate dehydrogenase complex which provides acetyl-CoA for de novo fatty acid biosynthesis. The gene is highly expressed in developing seeds.","AT3G20370",null,1473.6,1.839,0.14025,13.113,{"v":2.79e-39,"d":"2.79E-39"},4.07E-37,"TRAF-like family protein.","AT5G64080","XYP1",704.14,1.7208,0.17284,9.9563,{"v":2.37e-23,"d":"2.37E-23"},{"v":3.39e-21,"d":"3.39E-21"},"full_name=xylogen protein 1. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein."]
["AT1G25530",null,1421.4,-1.6861,0.13316,-12.662,{"v":9.6e-37,"d":"9.60E-37"},{"v":1.4E-34,"d":"1.40E-34"},"Transmembrane amino acid transporter family protein.","AT3G46660","UGT76E12",383.59,-2.6787,0.20431,-13.111,{"v":2.86e-39,"d":"2.86E-39"},4.15E-37,"full_name=UDP-glucosyl transferase 76E12. UDP-glucosyl transferase 76E12.","AT5G24470","PRR5",455.68,2.2265,0.22411,9.9346,{"v":2.94e-23,"d":"2.94E-23"},{"v":4.18e-21,"d":"4.18E-21"},"full_name=pseudo-response regulator 5. two-component response regulator-like protein. Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Acts as transcriptional repressor of CCA1 and LHY."]
["AT1G54740",null,543.74,-2.2172,0.1761,-12.59,2.39E-36,{"v":3.46e-34,"d":"3.46E-34"},"FANTASTIC four-like protein (DUF3049).","AT1G64900","CYP89A2",453.39,-2.4965,0.19138,-13.045,{"v":6.81e-39,"d":"6.81E-39"},{"v":9.79e-37,"d":"9.79E-37"},"full_name=cytochrome P450, family 89, subfamily A, polypeptide 2. cytochrome P450, family 89, subfamily A, polypeptide 2. Encodes cytochrome P450 (CYP89A2).","AT1G07135",null,110.61,4.1232,0.41515,9.9318,{"v":3.03e-23,"d":"3.03E-23"},{"v":4.27e-21,"d":"4.27E-21"},"glycine-rich protein."]
["AT1G19000",null,2013,-1.1908,0.094633,-12.583,{"v":2.62e-36,"d":"2.62E-36"},3.76E-34,"Homeodomain-like superfamily protein.","AT2G37460","UMAMIT12",251.81,-3.5626,0.2732,-13.04,{"v":7.2e-39,"d":"7.20E-39"},1.03E-36,"full_name=Usually multiple acids move in and out Transporters 12. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT5G60760",null,212.4,3.0487,0.30742,9.9173,{"v":3.5e-23,"d":"3.50E-23"},{"v":4.9e-21,"d":"4.90E-21"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein."]
["AT3G02630","ACP",2408.2,-1.9202,0.15265,-12.579,2.76E-36,{"v":3.92e-34,"d":"3.92E-34"},"Plant stearoyl-acyl-carrier-protein desaturase family protein.","AT1G11170",null,452.49,-2.3786,0.18309,-12.991,{"v":1.37e-38,"d":"1.37E-38"},1.93E-36,"lysine ketoglutarate reductase trans-splicing-like protein (DUF707).","AT5G47880","ERF1-1",1887.7,1.5414,0.15564,9.9034,{"v":4.02e-23,"d":"4.02E-23"},{"v":5.58e-21,"d":"5.58E-21"},"full_name=eukaryotic release factor 1-1. eukaryotic release factor 1-1. Encodes a eukaryotic release factor 1 homolog. Cosuppression of the gene's expression results affects cell elongation of the inflorescence stem, specifically the internodes, and radial cell division. Expression of the protein is primarily observed in the vascular system and in actively growing and elongating zones."]
["AT3G03470","CYP89A9",1556.2,-1.4378,0.11451,-12.556,{"v":3.67e-36,"d":"3.67E-36"},{"v":5.16e-34,"d":"5.16E-34"},"full_name=cytochrome P450, family 87, subfamily A, polypeptide 9. cytochrome P450, family 87, subfamily A, polypeptide 9. member of CYP89A","AT1G53380",null,343.23,3.4549,0.26595,12.991,{"v":1.38e-38,"d":"1.38E-38"},1.93E-36,"hypothetical protein (DUF641).","AT2G22470","AGP2",157.9,3.265,0.32973,9.902,{"v":4.08e-23,"d":"4.08E-23"},{"v":5.62e-21,"d":"5.62E-21"},"full_name=arabinogalactan protein 2. arabinogalactan protein 2. Encodes arabinogalactan-protein (AGP2)."]
["AT4G27160","SESA3",30307,-1.5695,0.125,-12.556,{"v":3.68e-36,"d":"3.68E-36"},{"v":5.16e-34,"d":"5.16E-34"},"full_name=seed storage albumin 3. seed storage albumin 3.","AT2G41280","M10",926.05,-2.4658,0.18992,-12.984,{"v":1.51e-38,"d":"1.51E-38"},{"v":2.11e-36,"d":"2.11E-36"},"late embryogenesis abundant protein (M10) / LEA protein M10. Encodes a hydrophilic protein similar to Late Embryogenesis Activated (LEA) proteins expressed during embryogenesis, which are thought to be involved in the acquisition of dessication tolerance.","AT5G51760","AHG1",234.95,2.5651,0.26142,9.812,{"v":9.99e-23,"d":"9.99E-23"},1.37E-20,"full_name=ABA-hypersensitive germination 1. Protein phosphatase 2C family protein. Encodes AHG1 (ABA-hypersensitive germination 1), a putative protein phosphatase 2C (PP2C). Expressed in seeds. AHG1 functions in seed development and germination."]
["AT3G04280","RR22",298.95,-3.3326,0.26544,-12.555,{"v":3.75e-36,"d":"3.75E-36"},{"v":5.21e-34,"d":"5.21E-34"},"full_name=response regulator 22. response regulator 22. Encodes an atypical subtype of the ARR (Arabidopsis response regulator) protein family. ARR22 is more similar to the receiver domains of hybrid kinases than other response regulators. It acts as a phosphohistidine phosphatase when tested with phospho-AHP5 in vitro suggesting that it might be involved in a two-component phosphorelay. Expression of ARR22 transcripts appears to be localized to the chalaza and to be induced by wounding. Ectopic expression of ARR in other parts of the plant leads to reduced cytokinin-related responses and impaired root, shoot, and flower development. Overexpression of wild-type ARR22 in an arr22 mutant background causes variable defects in plant growth and fertility. But, in the same ar22 background, over-expression of versions of ARR22 that should act as dominant-negative or constitutively active proteins, based on mutations to the conserved Asp residue, do not show any phenotypic abnormalities, raising the possibility that these may not act as canonical response regulators.","AT4G14960","TUA6",3841.4,1.4734,0.11449,12.87,{"v":6.64e-38,"d":"6.64E-38"},{"v":9.2e-36,"d":"9.20E-36"},"full_name=Tubulin alpha-6. Tubulin/FtsZ family protein. Encodes an alpha-tubulin isoform required for right handed helical growth.","AT1G68500",null,223.78,3.5263,0.35976,9.802,{"v":1.1E-22,"d":"1.10E-22"},{"v":1.5e-20,"d":"1.50E-20"},"hypothetical protein."]
["AT2G24560",null,210.85,3.6835,0.29341,12.554,{"v":3.78e-36,"d":"3.78E-36"},{"v":5.22e-34,"d":"5.22E-34"},"GDSL-like Lipase/Acylhydrolase family protein.","AT5G50100","DCC1",611.39,-2.1081,0.16432,-12.829,1.12E-37,{"v":1.54e-35,"d":"1.54E-35"},"Putative thiol-disulfide oxidoreductase DCC.","AT1G56340","CRT1a",1352.7,-1.5615,0.16032,-9.7401,{"v":2.03e-22,"d":"2.03E-22"},{"v":2.74e-20,"d":"2.74E-20"},"full_name=calreticulin 1a. calreticulin 1a. Encodes one of three Arabidopsis calreticulins. In CRT-deficient mouse fibroblasts, this protein restores ER Ca2+ levels."]
["AT1G62380","ACO2",3413.9,-1.3217,0.10572,-12.502,{"v":7.26e-36,"d":"7.26E-36"},{"v":9.95e-34,"d":"9.95E-34"},"full_name=ACC oxidase 2. ACC oxidase 2. Encodes a protein similar to 1-aminocyclopropane-1-carboxylic oxidase (ACC oxidase). Expression of the AtACO2 transcripts is affected by ethylene.","AT4G19810","ChiC",307.41,-5.348,0.41936,-12.753,{"v":3.01e-37,"d":"3.01E-37"},4.11E-35,"full_name=class V chitinase. Glycosyl hydrolase family protein with chitinase insertion domain-containing protein. ChiC encodes a Class V chitinase that is a part of glycoside hydrolase family 18 based on CAZy groupings. It appears to primarily act as an exochitinase in vitro where it predominantly cleaves a chitobiose (GlcNAc)2 residue from the non-reducing end of a chitin oligosaccharide. However, it shows some minor endochitinase activity in vitro, as well. A putative 24 amino-acid signal peptide may direct this protein to the secretory system and it has been detected in cell wall apoplastic fluid. RT-PCR experiments demonstrate that ChiC transcript levels are increased in response to abscisisc acid, jasmonic acid, and NaCl stress. Microarray results also suggest that transcript levels rise in response to osmotic stress, two fungal pathogens, a bacterial pathogen, and the elicitor flagellin.","AT1G53070",null,182.45,-2.6519,0.27409,-9.6753,{"v":3.84e-22,"d":"3.84E-22"},{"v":5.14e-20,"d":"5.14E-20"},"Legume lectin family protein."]
["AT3G23090","WDL3",540.71,-3.6142,0.28912,-12.501,{"v":7.39e-36,"d":"7.39E-36"},1.01E-33,"TPX2 (targeting protein for Xklp2) protein family.","AT5G26280",null,1086.7,1.9622,0.15412,12.732,{"v":3.94e-37,"d":"3.94E-37"},{"v":5.34e-35,"d":"5.34E-35"},"TRAF-like family protein.","AT5G64430",null,565.57,1.8187,0.18862,9.6424,5.29E-22,{"v":7.03e-20,"d":"7.03E-20"},"Octicosapeptide/Phox/Bem1p family protein."]
["AT1G54000","GLL22",1657.6,1.9494,0.15636,12.467,1.12E-35,1.52E-33,"full_name=GDSL lipase-like protein 22. GDSL-like Lipase/Acylhydrolase superfamily protein.","AT5G44260","TZF5",414.87,-2.4342,0.19126,-12.727,{"v":4.18e-37,"d":"4.18E-37"},{"v":5.62e-35,"d":"5.62E-35"},"Zinc finger C-x8-C-x5-C-x3-H type family protein.","AT5G06320","NHL3",343.91,2.0408,0.21181,9.6354,{"v":5.67e-22,"d":"5.67E-22"},7.47E-20,"full_name=NDR1/HIN1-like 3. NDR1/HIN1-like 3. encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and Pseudomonas syringae pv. tomato DC3000. The gene product is localized to the plasma membrane."]
["AT2G15620","NIR1",2195,-1.6037,0.12879,-12.452,{"v":1.36e-35,"d":"1.36E-35"},{"v":1.82e-33,"d":"1.82E-33"},"full_name=nitrite reductase 1. nitrite reductase 1. Involved in the second step of nitrate assimilation. Its expression is induced by nitrate.","AT5G13100",null,168.13,3.9966,0.31518,12.681,{"v":7.57e-37,"d":"7.57E-37"},1.01E-34,"Gap junction beta-4 protein.","AT5G63190","MRF1",2408.6,1.2894,0.13415,9.6119,{"v":7.12e-22,"d":"7.12E-22"},{"v":9.33e-20,"d":"9.33E-20"},"MA3 domain-containing protein."]
["AT4G08870","ARGAH2",1066.4,2.0436,0.16432,12.437,1.65E-35,{"v":2.2e-33,"d":"2.20E-33"},"full_name=arginine amidohydrolase 2. Arginase/deacetylase superfamily protein. Encodes one of the two arginase in the genome. Gene expression is enhanced by methyl jasmonate treatment. It is involved in the defense response to B.cinerea.","AT5G20950","BGLC1",2168.6,1.6652,0.13227,12.589,{"v":2.43e-36,"d":"2.43E-36"},{"v":3.23e-34,"d":"3.23E-34"},"Glycosyl hydrolase family protein.","AT1G79270","ECT8",425.62,2.6454,0.27643,9.5699,1.07E-21,{"v":1.39e-19,"d":"1.39E-19"},"full_name=evolutionarily conserved C-terminal region 8. evolutionarily conserved C-terminal region 8."]
["AT4G26590","OPT5",2838.5,-1.1079,0.089326,-12.403,{"v":2.51e-35,"d":"2.51E-35"},{"v":3.32e-33,"d":"3.32E-33"},"full_name=oligopeptide transporter 5. oligopeptide transporter 5. oligopeptide transporter","AT2G29460","GSTU4",226.28,-4.229,0.33631,-12.575,{"v":2.91e-36,"d":"2.91E-36"},{"v":3.84e-34,"d":"3.84E-34"},"full_name=glutathione S-transferase tau 4. glutathione S-transferase tau 4. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","AT1G34370","STOP1",518.45,1.7311,0.18145,9.5401,1.43E-21,{"v":1.84e-19,"d":"1.84E-19"},"full_name=sensitive to proton rhizotoxicity 1. C2H2 and C2HC zinc fingers superfamily protein. Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity. Cell wall of the mutant is unstable in low pH medium (pH 4.5) in low Ca solution. This would mediate Ca-alleviation of low pH stress through pectin-Ca interaction."]
["AT3G01470","HB-1",1071.5,1.9991,0.16195,12.344,{"v":5.27e-35,"d":"5.27E-35"},{"v":6.92e-33,"d":"6.92E-33"},"full_name=homeobox 1. homeobox 1. Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development.","AT4G22240","FBN1B",2330.5,-1.3917,0.11076,-12.565,{"v":3.3e-36,"d":"3.30E-36"},{"v":4.32e-34,"d":"4.32E-34"},"Plastid-lipid associated protein PAP / fibrillin family protein.","AT1G64140",null,1598.8,1.5159,0.15896,9.5364,1.48E-21,{"v":1.9E-19,"d":"1.90E-19"},"WRKY transcription factor."]
["AT4G10020","HSD5",2586.4,-1.5953,0.12946,-12.323,{"v":6.85e-35,"d":"6.85E-35"},{"v":8.94e-33,"d":"8.94E-33"},"full_name=hydroxysteroid dehydrogenase 5. hydroxysteroid dehydrogenase 5. Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.","AT3G19390",null,210.03,4.0829,0.32637,12.51,{"v":6.59e-36,"d":"6.59E-36"},{"v":8.56e-34,"d":"8.56E-34"},"Granulin repeat cysteine protease family protein.","AT4G04020","FIB",777.73,1.6523,0.17411,9.4897,{"v":2.32e-21,"d":"2.32E-21"},{"v":2.95e-19,"d":"2.95E-19"},"full_name=fibrillin. fibrillin. Fibrillin precursor protein. The fibrillin preprotein, but not the mature protein interacts with ABI2. Regulated by abscisic acid response regulators. Involved in abscisic acid-mediated photoprotection."]
["AT2G35370","GDCH",526.1,2.6387,0.21446,12.304,{"v":8.6e-35,"d":"8.60E-35"},1.11E-32,"full_name=glycine decarboxylase complex H. glycine decarboxylase complex H. Encodes glycine decarboxylase complex H protein. Involved in photorespiration.","AT1G45130","BGAL5",315.37,2.6691,0.21364,12.493,{"v":8.1e-36,"d":"8.10E-36"},1.05E-33,"full_name=beta-galactosidase 5. beta-galactosidase 5.","AT5G06750","APD8",299.71,2.2264,0.23465,9.4885,{"v":2.34e-21,"d":"2.34E-21"},{"v":2.97e-19,"d":"2.97E-19"},"Protein phosphatase 2C family protein."]
["AT1G48470","GLN1;5",2648.5,-1.6274,0.13256,-12.277,{"v":1.2E-34,"d":"1.20E-34"},{"v":1.55e-32,"d":"1.55E-32"},"full_name=glutamine synthetase 1;5. glutamine synthetase 1;5. Encodes cytosolic glutamine synthase isozyme. Expression of mRNA is not detectable in roots.","AT5G46110","APE2",1623.4,1.6179,0.12986,12.459,{"v":1.25e-35,"d":"1.25E-35"},{"v":1.6e-33,"d":"1.60E-33"},"full_name=ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2. Glucose-6-phosphate/phosphate translocator-like protein. Encodes a chloroplast triose phosphate / 3-phosphoglycerate translocator that transports triose phosphates derived from the Calvin cycle in the stroma to the cytosol for use in sucrose synthesis and other biosynthetic processes. A tpt mutant has altered acclimation responses.","AT1G07985",null,2177.1,2.0213,0.21362,9.4621,3.02E-21,{"v":3.79e-19,"d":"3.79E-19"},"Expressed protein."]
["AT3G51860","CAX3",1868.6,-1.366,0.11138,-12.264,1.42E-34,{"v":1.81e-32,"d":"1.81E-32"},"full_name=cation exchanger 3. cation exchanger 3.","AT5G02380","MT2B",10008,-1.0977,0.08826,-12.437,1.65E-35,{"v":2.1e-33,"d":"2.10E-33"},"full_name=metallothionein 2B. metallothionein 2B. cysteine-rich protein with copper-binding activity","AT3G61820",null,392.68,-1.9269,0.20371,-9.4592,{"v":3.1e-21,"d":"3.10E-21"},{"v":3.87e-19,"d":"3.87E-19"},"Eukaryotic aspartyl protease family protein."]
["AT5G38160",null,466.79,-3.2086,0.26222,-12.236,1.99E-34,{"v":2.52e-32,"d":"2.52E-32"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT1G09210","CRT1b",1572.6,1.5609,0.12571,12.416,{"v":2.14e-35,"d":"2.14E-35"},{"v":2.7e-33,"d":"2.70E-33"},"full_name=calreticulin 1b. calreticulin 1b. Encodes one of three Arabidopsis calreticulins.","AT4G27520","ENODL2",632.94,2.1416,0.22663,9.4498,{"v":3.4E-21,"d":"3.40E-21"},{"v":4.21e-19,"d":"4.21E-19"},"full_name=early nodulin-like protein 2. early nodulin-like protein 2."]
["AT3G20370",null,475.04,2.9411,0.24064,12.222,{"v":2.38e-34,"d":"2.38E-34"},{"v":3E-32,"d":"3.00E-32"},"TRAF-like family protein.","AT1G75780","TUB1",337.46,2.6589,0.21418,12.414,2.19E-35,2.76E-33,"full_name=tubulin beta-1 chain. tubulin beta-1 chain. beta tubulin gene downregulated by phytochrome A (phyA)-mediated far-red light high-irradiance and the phytochrome B (phyB)-mediated red light high-irradiance responses","AT2G45980","ATI1",688.54,1.4867,0.15802,9.408,{"v":5.06e-21,"d":"5.06E-21"},{"v":6.2e-19,"d":"6.20E-19"},"full_name=ATG8-interacting protein 1. mesoderm induction early response protein. Encodes an Atg8-interacting protein that is partially associated with the ER during favorable growth conditions and becomes mainly associated with a spherical compartment that dynamically moves along the ER network. In stress induced plants, ATI1 is localized to a novel plastid associated bodies that are transported to vesicles, in what appears to be an autophagy dependent process. ATI1 interacts with number of other plastid proteins such as NPQ4 and APE1."]
["AT2G16060","HB1",1573,-2.524,0.20743,-12.168,{"v":4.59e-34,"d":"4.59E-34"},{"v":5.75e-32,"d":"5.75E-32"},"full_name=hemoglobin 1. hemoglobin 1. Encodes a class 1 nonsymbiotic hemoglobin induced by low oxygen levels with very high oxygen affinity. It is not likely to be a hemoglobin transporter because of its extremely high affinity for oxygen. Overexpression impairs cold stress-induced nitric oxide (NO) production.","AT5G65020","ANNAT2",1780.6,1.5752,0.12741,12.363,{"v":4.14e-35,"d":"4.14E-35"},{"v":5.17e-33,"d":"5.17E-33"},"full_name=annexin 2. annexin 2. Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane. They may be involved in the Golgi-mediated secretion of polysaccharides.","AT5G20280","SPS1F",2103.9,1.5017,0.15963,9.4076,{"v":5.07e-21,"d":"5.07E-21"},{"v":6.2e-19,"d":"6.20E-19"},"full_name=sucrose phosphate synthase 1F. sucrose phosphate synthase 1F. Encodes a protein with putative sucrose-phosphate synthase activity. When the gene was expressed in transgenic tobacco plants, a clear trend for increased SPS activity was noted."]
["AT4G09750",null,365.98,2.728,0.22472,12.139,{"v":6.52e-34,"d":"6.52E-34"},{"v":8.12e-32,"d":"8.12E-32"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT5G13330","Rap2.6L",322.79,-2.89,0.23428,-12.335,{"v":5.84e-35,"d":"5.84E-35"},{"v":7.24e-33,"d":"7.24E-33"},"full_name=related to AP2 6l. related to AP2 6l. encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.","AT5G67060","HEC1",180.36,-3.4165,0.36377,-9.392,{"v":5.89e-21,"d":"5.89E-21"},{"v":7.15e-19,"d":"7.15E-19"},"full_name=HECATE 1. basic helix-loop-helix (bHLH) DNA-binding superfamily protein."]
["AT3G48700","CXE13",1124.5,2.4503,0.20252,12.099,{"v":1.07e-33,"d":"1.07E-33"},{"v":1.33e-31,"d":"1.33E-31"},"full_name=carboxyesterase 13. carboxyesterase 13.","AT5G41040","RWP1",234.98,-5.9849,0.48589,-12.317,{"v":7.3e-35,"d":"7.30E-35"},{"v":8.99e-33,"d":"8.99E-33"},"full_name=REDUCED LEVELS OF WALL-BOUND PHENOLICS 1. HXXXD-type acyl-transferase family protein. Encodes a feruloyl-CoA transferase required for suberin synthesis. Has feruloyl-CoA-dependent feruloyl transferase activity towards substrates with a primary alcohol.","AT1G09210","CRT1b",1217.3,-1.392,0.1483,-9.3864,{"v":6.21e-21,"d":"6.21E-21"},{"v":7.5e-19,"d":"7.50E-19"},"full_name=calreticulin 1b. calreticulin 1b. Encodes one of three Arabidopsis calreticulins."]
["AT1G65090",null,4174,-1.8802,0.15611,-12.044,2.07E-33,{"v":2.55e-31,"d":"2.55E-31"},"nucleolin.","AT3G23570",null,1301.6,-1.6281,0.13236,-12.3,{"v":9.03e-35,"d":"9.03E-35"},{"v":1.1E-32,"d":"1.10E-32"},"alpha/beta-Hydrolases superfamily protein.","AT4G15236","ABCG43",114.71,3.8768,0.41363,9.3728,7.06E-21,8.47E-19,"full_name=ATP-binding cassette G43. ABC-2 and Plant PDR ABC-type transporter family protein."]
["AT1G15825",null,1279.6,-1.4477,0.12053,-12.011,{"v":3.11e-33,"d":"3.11E-33"},{"v":3.8E-31,"d":"3.80E-31"},"hydroxyproline-rich glycoprotein family protein.","AT1G25440","BBX15",132.09,5.5535,0.45586,12.183,3.85E-34,4.68E-32,"full_name=B-box domain protein 15. B-box type zinc finger protein with CCT domain-containing protein.","AT5G54080","HGO",502.43,1.8776,0.20059,9.3603,{"v":7.95e-21,"d":"7.95E-21"},{"v":9.47e-19,"d":"9.47E-19"},"full_name=homogentisate 1,2-dioxygenase. homogentisate 1,2-dioxygenase. Encodes a homogentisate 1,2-dioxygenase that can convert homogentisate to malylacetoacetate and is likely to be involved in tyrosine catabolism."]
["AT1G18100","E12A11",11174,-1.3283,0.11061,-12.009,{"v":3.17e-33,"d":"3.17E-33"},{"v":3.85e-31,"d":"3.85E-31"},"PEBP (phosphatidylethanolamine-binding protein) family protein. Encodes a member of the FT and TFL1 family of phosphatidylethanolamine-binding proteins. It is expressed in seeds and up-regulated in response to ABA. Loss of function mutants show decreased rate of germination in the presence of ABA. ABA dependent regulation is mediated by both ABI3 and ABI5. ABI5 promotes MFT expression, primarily in the radicle-hypocotyl transition zone and ABI3 suppresses it in the seed.","AT4G32460","BDX",1910.8,1.6488,0.13574,12.147,{"v":5.93e-34,"d":"5.93E-34"},{"v":7.17e-32,"d":"7.17E-32"},"choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642).","AT5G03190","CPUORF47",856.95,1.6523,0.17672,9.35,{"v":8.76e-21,"d":"8.76E-21"},{"v":1.04e-18,"d":"1.04E-18"},"full_name=conserved peptide upstream open reading frame 47. peptide upstream protein. Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF47 represents a conserved upstream opening reading frame relative to major ORF AT5G03190.1"]
["AT1G30120","PDH-E1 BETA",890,-2.3022,0.19204,-11.988,4.09E-33,{"v":4.92e-31,"d":"4.92E-31"},"full_name=pyruvate dehydrogenase E1 beta. pyruvate dehydrogenase E1 beta. Encodes a putative plastid pyruvate dehydrogenase E1 beta subunit that is distinct from the mitochondrial pyruvate dehydrogenase E1 beta subunit.","AT5G01530","LHCB4.1",2545.6,1.6113,0.13274,12.139,{"v":6.57e-34,"d":"6.57E-34"},{"v":7.88e-32,"d":"7.88E-32"},"full_name=light harvesting complex photosystem II. light harvesting complex photosystem II.","AT3G53420","PIP2A",1325.9,1.9336,0.20726,9.329,1.07E-20,1.26E-18,"full_name=plasma membrane intrinsic protein 2A. plasma membrane intrinsic protein 2A. a member of the plasma membrane intrinsic protein subfamily PIP2. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed specifically in the vascular bundles and protein level increases slightly during leaf dev. When expressed in yeast cells can conduct hydrogen peroxide into those cells."]
["AT5G08640","FLS1",466.33,-1.9462,0.16353,-11.901,1.17E-32,{"v":1.4e-30,"d":"1.40E-30"},"full_name=flavonol synthase 1. flavonol synthase 1. Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols. Co-expressed with CHI and CHS (qRT-PCR).","AT4G11040","RDO5",628.17,-2.2587,0.18611,-12.136,{"v":6.78e-34,"d":"6.78E-34"},{"v":8.08e-32,"d":"8.08E-32"},"Protein phosphatase 2C family protein. Encodes a nuclear localized protein with sequence similarity to PP2C phosphatases that is involved in seed dormancy. Loss of function mutations have reduced seed dormancy but does not act through ABA or DOG1 pathways.","AT1G76180","ERD14",2102,2.0391,0.21894,9.3134,{"v":1.24e-20,"d":"1.24E-20"},1.45E-18,"full_name=EARLY RESPONSE TO DEHYDRATION 14. Dehydrin family protein. Encodes a dehydrin protein whose expression is induced early on in response to dehydration stress. This gene's expression to cold occurs in two waves, with early induction occurring within 1 h and secondary induction occurring 5 h after the beginning of cold stress. Expression is also induced in response to ABA but not in response to 2,4-D, BA, and GA3. ERD14 protein is capable of binding Ca2+, especially when the protein is phosphorylated."]
["AT3G16450","JAL33",185.02,5.2008,0.43763,11.884,1.43E-32,{"v":1.7e-30,"d":"1.70E-30"},"full_name=Jacalin-related lectin 33. Mannose-binding lectin superfamily protein.","AT5G19440",null,1172.9,-1.4941,0.12368,-12.081,{"v":1.34e-33,"d":"1.34E-33"},1.59E-31,"NAD(P)-binding Rossmann-fold superfamily protein. similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase","AT1G03220","SAP2",1412.6,1.2461,0.13386,9.3088,{"v":1.29e-20,"d":"1.29E-20"},{"v":1.5e-18,"d":"1.50E-18"},"Eukaryotic aspartyl protease family protein."]
["AT1G06430","FTSH8",1564.8,-1.4902,0.12567,-11.858,{"v":1.96e-32,"d":"1.96E-32"},{"v":2.32e-30,"d":"2.32E-30"},"full_name=FTSH protease 8. FTSH protease 8. encodes a FtsH protease that is localized to the chloroplast","AT4G23250","EMB1290",233.39,2.8215,0.2338,12.068,1.56E-33,1.84E-31,"full_name=EMBRYO DEFECTIVE 1290. cysteine-rich receptor-like protein kinase 17.","AT1G45145","TRX5",443.33,1.8845,0.20248,9.3072,1.31E-20,{"v":1.51e-18,"d":"1.51E-18"},"full_name=thioredoxin H-type 5. thioredoxin H-type 5. encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells."]
["AT4G01120","GBF2",566.32,-1.8405,0.15543,-11.842,{"v":2.38e-32,"d":"2.38E-32"},{"v":2.8e-30,"d":"2.80E-30"},"full_name=G-box binding factor 2. G-box binding factor 2. bZIP (basic leucine zipper) transcription factor that binds to the G-box regulatory element found in many plant promoters. GBF2 nuclear localization is increased by blue light","AT5G48180","NSP5",4094.4,-1.1625,0.096374,-12.063,{"v":1.66e-33,"d":"1.66E-33"},1.94E-31,"full_name=nitrile specifier protein 5. nitrile specifier protein 5. Encodes a nitrile-specifier protein NSP5. NSP5 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation.","AT5G40850","UPM1",407.44,1.989,0.21398,9.2955,{"v":1.47e-20,"d":"1.47E-20"},{"v":1.68e-18,"d":"1.68E-18"},"full_name=urophorphyrin methylase 1. urophorphyrin methylase 1. Encodes a urophorphyrin III methylase that catalyzes S-adenosyl-L-methionine-dependent transmethylation in a multistep process involving the formation of a covalently linked complex with S-adenosyl-L-methionine."]
["AT1G48130","PER1",1013,-1.8025,0.15241,-11.827,2.83E-32,{"v":3.3e-30,"d":"3.30E-30"},"full_name=1-cysteine peroxiredoxin 1. 1-cysteine peroxiredoxin 1. encodes a protein similar to the 1-cysteine (1-Cys) peroxiredoxin family of antioxidants. Expression is limited to seed (aleurone and embryo) and is not induced by ABA or drought.","AT3G18780","ACT2",2607,1.5453,0.12818,12.056,{"v":1.81e-33,"d":"1.81E-33"},{"v":2.11e-31,"d":"2.11E-31"},"full_name=actin 2. actin 2. Encodes an actin that is constitutively expressed in vegetative structures but not pollen. ACT2 is involved in tip growth of root hairs.","AT5G57900","SKIP1",658.07,1.7022,0.1835,9.2763,1.76E-20,{"v":1.99e-18,"d":"1.99E-18"},"full_name=SKP1 interacting partner 1. SKP1 interacting partner 1. F-box protein, interacts with SKP1/ASK1 subunit of SCF ubiquitin ligase in a glucose-dependent manner"]
["AT1G62780",null,798.09,1.7767,0.15036,11.816,3.21E-32,{"v":3.72e-30,"d":"3.72E-30"},"dimethylallyl, adenosine tRNA methylthiotransferase.","AT1G52400","BGLU18",1540.2,-1.961,0.16293,-12.036,{"v":2.31e-33,"d":"2.31E-33"},{"v":2.67e-31,"d":"2.67E-31"},"full_name=beta glucosidase 18. beta glucosidase 18. encodes a member of glycosyl hydrolase family 1, located in inducible ER bodies which were formed after wounding, required in inducible ER body formation","AT5G15850","COL1",136.81,3.0434,0.32809,9.2762,1.76E-20,{"v":1.99e-18,"d":"1.99E-18"},"full_name=CONSTANS-like 1. CONSTANS-like 1. Homologous to the flowering-time gene CONSTANS."]
["AT1G08810","MYB60",368.03,-3.1761,0.26959,-11.781,4.89E-32,{"v":5.64e-30,"d":"5.64E-30"},"full_name=myb domain protein 60. myb domain protein 60. putative transcription factor of the R2R3-MYB gene family. Transcript increases under conditions that promote stomatal opening (white and blue light, abi1-1 mutation) and decreases under conditions that trigger stomatal closure (ABA, desiccation, darkness), with the exception of elevated CO2. Expressed exclusively in guard cells of all tissues. It is required for light-induced opening of stomata. Mutant shows reduced stomatal aperture which helps to limit water loss during drought.","AT1G70780",null,1578.8,-1.3869,0.11552,-12.006,{"v":3.3e-33,"d":"3.30E-33"},{"v":3.79e-31,"d":"3.79E-31"},"hypothetical protein.","AT1G69870","NRT1.7",418.67,2.4765,0.26772,9.2502,2.24E-20,{"v":2.52e-18,"d":"2.52E-18"},"full_name=nitrate transporter 1.7. nitrate transporter 1.7. Encodes a low affinity nitrate transporter NRT1.7. Expressed in phloem. Responsible for source-to-sink remobilization of nitrate."]
["AT3G18570",null,163.79,-3.5409,0.30344,-11.669,1.83E-31,{"v":2.1e-29,"d":"2.10E-29"},"Oleosin family protein.","AT3G04290","LTL1",160.13,4.2006,0.35098,11.968,{"v":5.22e-33,"d":"5.22E-33"},{"v":5.96e-31,"d":"5.96E-31"},"full_name=Li-tolerant lipase 1. Li-tolerant lipase 1.","AT5G50100","DCC1",393.21,1.8281,0.19769,9.247,2.31E-20,{"v":2.58e-18,"d":"2.58E-18"},"Putative thiol-disulfide oxidoreductase DCC."]
["AT5G36160","TAT2",761.81,-1.7003,0.14607,-11.641,{"v":2.56e-31,"d":"2.56E-31"},{"v":2.92e-29,"d":"2.92E-29"},"Tyrosine transaminase family protein. Encodes an L-tyrosine aminotransferase.","AT5G40420","OLEO2",618.1,-3.3578,0.2819,-11.911,1.03E-32,1.17E-30,"full_name=oleosin 2. oleosin 2. Encodes oleosin2, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.","AT2G41640",null,230.6,2.2956,0.2483,9.2451,{"v":2.35e-20,"d":"2.35E-20"},2.61E-18,"Glycosyltransferase family 61 protein."]
["AT3G19130","RBP47B",2949.1,-1.3072,0.11232,-11.639,{"v":2.61e-31,"d":"2.61E-31"},{"v":2.96e-29,"d":"2.96E-29"},"full_name=RNA-binding protein 47B. RNA-binding protein 47B.","AT4G23600","CORI3",2439.4,-1.8319,0.15418,-11.881,{"v":1.48e-32,"d":"1.48E-32"},1.67E-30,"full_name=CORONATINE INDUCED 1. Tyrosine transaminase family protein. Encodes cystine lyase which is expected to be involved in amino acid metabolism, providing the plant with cysteine and the generation of precursors of ethylene biosynthesis. mRNA levels are elevated in response to wounding.","AT3G60930",null,584.39,1.8954,0.20572,9.2136,{"v":3.16e-20,"d":"3.16E-20"},{"v":3.49e-18,"d":"3.49E-18"},"transposable_element_gene."]
["AT2G33830","DRM2",1665.9,1.6182,0.13943,11.606,{"v":3.86e-31,"d":"3.86E-31"},{"v":4.35e-29,"d":"4.35E-29"},"Dormancy/auxin associated family protein.","AT2G37640","EXP3",2594.5,1.5803,0.13312,11.871,{"v":1.67e-32,"d":"1.67E-32"},{"v":1.88e-30,"d":"1.88E-30"},"Barwin-like endoglucanases superfamily protein. member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","AT5G28540","BIP1",2031.2,-1.1981,0.13055,-9.1774,{"v":4.42e-20,"d":"4.42E-20"},{"v":4.85e-18,"d":"4.85E-18"},"heat shock protein 70 (Hsp 70) family protein. Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei."]
["AT5G53460","GLT1",3226.3,-1.4067,0.1216,-11.568,{"v":6.01e-31,"d":"6.01E-31"},{"v":6.72e-29,"d":"6.72E-29"},"full_name=NADH-dependent glutamate synthase 1. NADH-dependent glutamate synthase 1. NADH-dependent glutamate synthase","AT5G22740","CSLA02",448.2,1.9545,0.16496,11.849,{"v":2.19e-32,"d":"2.19E-32"},{"v":2.44e-30,"d":"2.44E-30"},"full_name=cellulose synthase-like A02. cellulose synthase-like A02. encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein","AT2G29460","GSTU4",113.59,3.603,0.39305,9.1668,{"v":4.87e-20,"d":"4.87E-20"},{"v":5.32e-18,"d":"5.32E-18"},"full_name=glutathione S-transferase tau 4. glutathione S-transferase tau 4. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002)."]
["AT5G26280",null,335.79,2.6414,0.22874,11.548,7.57E-31,{"v":8.42e-29,"d":"8.42E-29"},"TRAF-like family protein.","AT2G04170",null,442.8,2.2377,0.18997,11.779,{"v":4.98e-32,"d":"4.98E-32"},{"v":5.52e-30,"d":"5.52E-30"},"TRAF-like family protein.","AT3G02990","HSFA1E",1208.9,1.4392,0.15709,9.1612,5.13E-20,{"v":5.58e-18,"d":"5.58E-18"},"full_name=heat shock transcription factor A1E. heat shock transcription factor A1E. member of Heat Stress Transcription Factor (Hsf) family"]
["AT1G11680","CYP51G1",1841.7,-1.2422,0.10762,-11.543,{"v":8.01e-31,"d":"8.01E-31"},{"v":8.86e-29,"d":"8.86E-29"},"full_name=CYTOCHROME P450 51G1. CYTOCHROME P450 51G1. putative obtusifoliol 14-alpha demethylase involved in sterol biosynthesis.","AT4G12580",null,212.94,-4.7264,0.40172,-11.766,{"v":5.88e-32,"d":"5.88E-32"},{"v":6.47e-30,"d":"6.47E-30"},"hypothetical protein.","AT4G36700",null,134.58,2.9127,0.3185,9.1452,{"v":5.95e-20,"d":"5.95E-20"},{"v":6.43e-18,"d":"6.43E-18"},"RmlC-like cupins superfamily protein."]
["AT1G20450","ERD10",470.89,-3.026,0.26277,-11.516,{"v":1.1e-30,"d":"1.10E-30"},{"v":1.2e-28,"d":"1.20E-28"},"full_name=EARLY RESPONSIVE TO DEHYDRATION 10. Dehydrin family protein. Encodes a gene induced by low temperature and dehydration. Inhibits e.coli growth while overexpressed. Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. LTI29 and LTI30 double overexpressors confer cold tolerance. Localized to membranes and cytoplasm.","AT2G37770","ChlAKR",178.73,-4.4112,0.375,-11.763,{"v":6.05e-32,"d":"6.05E-32"},6.63E-30,"full_name=Chloroplastic aldo-keto reductase. NAD(P)-linked oxidoreductase superfamily protein. Encodes an NADPH-dependent aldo-keto reductase that can act on a wide variety of substrates in vitro including saturated and unsaturated aldehydes, steroids, and sugars. GFP-tagged AKR4C9 localizes to the chloroplast where it may play a role in detoxifying reactive carbonyl compounds that threaten to impair the photosynthetic process. Transcript levels for this gene are up-regulated in response to cold, salt, and drought stress.","AT4G34530","CIB1",90.425,-5.2448,0.57429,-9.1326,{"v":6.69e-20,"d":"6.69E-20"},{"v":7.18e-18,"d":"7.18E-18"},"full_name=cryptochrome-interacting basic-helix-loop-helix 1. cryptochrome-interacting basic-helix-loop-helix 1. Encodes a transcription factor CIB1 (cryptochrome-interacting basic-helix-loop-helix). CIB1 interacts with CRY2 (cryptochrome 2) in a blue light-specific manner in yeast and Arabidopsis cells, and it acts together with additional CIB1-related proteins to promote CRY2-dependent floral initiation. CIB1 positively regulates FT expression."]
["AT4G01900","GLB1",796.26,-1.6578,0.14396,-11.516,{"v":1.1e-30,"d":"1.10E-30"},{"v":1.2e-28,"d":"1.20E-28"},"full_name=GLNB1 homolog. nitrogen regulatory P-II-like protein. encodes a PII protein that may function as part of a signal transduction network involved in perceiving the status of carbon and organic nitrogen. Forms a protein complex with N-acetylglutamate kinase and regulates the kinase activity by relieving the feedback inhibition of the kinase by arginine. Regulates acetyl-CoA carboxylase activity.","AT1G43780","scpl44",202.85,3.6593,0.31142,11.75,{"v":7.06e-32,"d":"7.06E-32"},{"v":7.69e-30,"d":"7.69E-30"},"full_name=serine carboxypeptidase-like 44. serine carboxypeptidase-like 44.","AT2G46830","CCA1",106.28,3.6654,0.40158,9.1274,{"v":7.01e-20,"d":"7.01E-20"},{"v":7.49e-18,"d":"7.49E-18"},"full_name=circadian clock associated 1. circadian clock associated 1. Encodes a transcriptional repressor that performs overlapping functions with LHY in a regulatory feedback loop that is closely associated with the circadian oscillator of Arabidopsis. Binds to the evening element in the promoter of TOC1 and represses TOC1 transcription. CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis."]
["AT4G39210","APL3",8379.1,1.8015,0.15646,11.514,1.12E-30,1.22E-28,"Glucose-1-phosphate adenylyltransferase family protein. Encodes the large subunit of ADP-Glucose Pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL3 is the major large subunit isoform present in inflorescences, fruits and roots.","AT2G42220",null,375.73,2.2409,0.19083,11.743,{"v":7.65e-32,"d":"7.65E-32"},{"v":8.29e-30,"d":"8.29E-30"},"Rhodanese/Cell cycle control phosphatase superfamily protein.","AT5G43450",null,109.22,3.5767,0.39192,9.1259,{"v":7.11e-20,"d":"7.11E-20"},{"v":7.55e-18,"d":"7.55E-18"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. encodes a protein whose sequence is similar to ACC oxidase"]
["AT3G44750","HDA3",2000.7,1.139,0.099293,11.471,{"v":1.85e-30,"d":"1.85E-30"},{"v":2e-28,"d":"2.00E-28"},"full_name=histone deacetylase 3. histone deacetylase 3. Encodes a histone deacetylase. Controls the development of adaxial/abaxial leaf polarity. Two lines with RNAi-directed against this gene show reduced Agrobacterium-mediated DNA transformation of the roots.","AT1G03790","SOM",728.12,-1.8139,0.15482,-11.716,1.05E-31,1.13E-29,"full_name=SOMNUS. Zinc finger C-x8-C-x5-C-x3-H type family protein. Encodes SOMNUS (SOM), a nucleus-localized CCCH-type zinc finger protein. SOM negatively regulates light-dependent seed germination downstream of PIL5 (AT2G20180).","AT4G37760","SQE3",200.34,2.6424,0.28976,9.1195,{"v":7.55e-20,"d":"7.55E-20"},7.97E-18,"full_name=squalene epoxidase 3. squalene epoxidase 3."]
["AT5G52882",null,445.17,-2.0069,0.17498,-11.47,1.87E-30,{"v":2.01e-28,"d":"2.01E-28"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT1G64390","GH9C2",714.61,1.9748,0.16878,11.7,1.27E-31,{"v":1.36e-29,"d":"1.36E-29"},"full_name=glycosyl hydrolase 9C2. glycosyl hydrolase 9C2.","AT3G55430",null,329.53,1.912,0.20993,9.1081,{"v":8.38e-20,"d":"8.38E-20"},{"v":8.79e-18,"d":"8.79E-18"},"O-Glycosyl hydrolases family 17 protein."]
["AT1G03940",null,410.26,3.463,0.30215,11.461,2.07E-30,{"v":2.21e-28,"d":"2.21E-28"},"HXXXD-type acyl-transferase family protein.","AT4G27170","SESA4",206.47,-3.3366,0.28564,-11.681,1.59E-31,{"v":1.69e-29,"d":"1.69E-29"},"full_name=seed storage albumin 4. seed storage albumin 4.","AT1G80340","GA3OX2",136.77,-2.9229,0.32157,-9.0896,{"v":9.94e-20,"d":"9.94E-20"},1.04E-17,"full_name=gibberellin 3-oxidase 2. gibberellin 3-oxidase 2. Encodes a protein with gibberellin 3 &#946;-hydroxylase activity. The protein was heterologously expressed in E. coli and shown to catalyze the hydroxylation of both GA9 and GA20."]
["AT1G48990",null,303.7,-3.4884,0.30472,-11.448,{"v":2.41e-30,"d":"2.41E-30"},{"v":2.56e-28,"d":"2.56E-28"},"Oleosin family protein.","AT1G20630","CAT1",639.76,-1.9102,0.16366,-11.672,{"v":1.78e-31,"d":"1.78E-31"},{"v":1.88e-29,"d":"1.88E-29"},"full_name=catalase 1. catalase 1. Catalyzes the reduction of hydrogen peroxide using heme group as cofactor. Protects cells from toxicity by H2O2.","AT5G67330","NRAMP4",1222.7,1.2563,0.13838,9.0787,{"v":1.1e-19,"d":"1.10E-19"},{"v":1.14e-17,"d":"1.14E-17"},"full_name=natural resistance associated macrophage protein 4. natural resistance associated macrophage protein 4. Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp3, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination."]
["AT5G14370",null,373.49,-2.6649,0.23322,-11.427,{"v":3.07e-30,"d":"3.07E-30"},3.24E-28,"CCT motif family protein.","AT4G36360","BGAL3",1091.3,-2.3238,0.19912,-11.67,{"v":1.81e-31,"d":"1.81E-31"},{"v":1.9e-29,"d":"1.90E-29"},"full_name=beta-galactosidase 3. beta-galactosidase 3. putative beta-galactosidase (BGAL3 gene)","AT2G45960","PIP1B",4410.9,1.2348,0.13674,9.0305,1.71E-19,{"v":1.76e-17,"d":"1.76E-17"},"full_name=plasma membrane intrinsic protein 1B. plasma membrane intrinsic protein 1B. a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development."]
["AT5G61780","Tudor2",4340.5,-1.0417,0.091195,-11.423,{"v":3.21e-30,"d":"3.21E-30"},3.37E-28,"full_name=TUDOR-SN protein 2. TUDOR-SN protein 2. Involved in the regulation of AtGA20ox3 expression, as well as seed germination.","AT1G44800","SIAR1",220.47,-3.1616,0.27146,-11.646,{"v":2.39e-31,"d":"2.39E-31"},{"v":2.5e-29,"d":"2.50E-29"},"full_name=Siliques Are Red 1. nodulin MtN21 /EamA-like transporter family protein. Encodes Siliques Are Red 1 (SIAR1). Functions as a bidirectional amino acid transporter that is crucial for the amino acid homeostasis of siliques. Member of nodulin MtN21-like transporter family.","AT5G02490","Hsp70-2",398.49,1.758,0.19518,9.0071,{"v":2.12e-19,"d":"2.12E-19"},2.17E-17,"Heat shock protein 70 (Hsp 70) family protein."]
["AT1G74950","TIFY10B",1834,-1.1551,0.10114,-11.421,{"v":3.28e-30,"d":"3.28E-30"},{"v":3.43e-28,"d":"3.43E-28"},"TIFY domain/Divergent CCT motif family protein.","AT1G04430",null,639.58,1.7268,0.14842,11.634,{"v":2.76e-31,"d":"2.76E-31"},2.85E-29,"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT5G62130",null,177.82,2.7672,0.3076,8.9962,{"v":2.34e-19,"d":"2.34E-19"},2.38E-17,"Per1-like family protein."]
["AT2G25940","ALPHA-VPE",387.34,-2.1568,0.18895,-11.415,3.54E-30,{"v":3.67e-28,"d":"3.67E-28"},"full_name=alpha-vacuolar processing enzyme. alpha-vacuolar processing enzyme. Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions.","AT5G13170","SAG29",192.09,-5.6852,0.48866,-11.634,{"v":2.76e-31,"d":"2.76E-31"},2.85E-29,"full_name=senescence-associated gene 29. senescence-associated gene 29. Encodes a member of the SWEET sucrose efflux transporter family proteins.","AT3G14595",null,569.69,1.8448,0.20525,8.9881,{"v":2.52e-19,"d":"2.52E-19"},{"v":2.55e-17,"d":"2.55E-17"},"Ribosomal protein L18ae family."]
["AT3G11930",null,1127.5,-1.7374,0.15259,-11.386,{"v":4.89e-30,"d":"4.89E-30"},{"v":5.06e-28,"d":"5.06E-28"},"Adenine nucleotide alpha hydrolases-like superfamily protein.","AT3G54580","EXT17",135.29,5.8106,0.50057,11.608,{"v":3.75e-31,"d":"3.75E-31"},{"v":3.86e-29,"d":"3.86E-29"},"Proline-rich extensin-like family protein.","AT2G40000","HSPRO2",388.87,1.7187,0.19125,8.9867,{"v":2.55e-19,"d":"2.55E-19"},2.57E-17,"full_name=ortholog of sugar beet HS1 PRO-1 2. ortholog of sugar beet HS1 PRO-1 2."]
["AT3G59010","PME61",153.62,-4.0147,0.35307,-11.371,{"v":5.84e-30,"d":"5.84E-30"},{"v":6e-28,"d":"6.00E-28"},"full_name=pectin methylesterase 61. pectin methylesterase 61. Encodes PME35, a pectin methylesterase. PME35-mediated demethylesterification of the primary cell wall regulates the mechanical strength of the supporting tissue.","AT2G04160","AIR3",117.43,5.0451,0.43565,11.581,{"v":5.17e-31,"d":"5.17E-31"},{"v":5.3e-29,"d":"5.30E-29"},"full_name=AUXIN-INDUCED IN ROOT CULTURES 3. Subtilisin-like serine endopeptidase family protein. isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein similar to subtilisin-like serine protease which is believed to be active outside the plant cell.","AT3G45140","LOX2",2229.9,-1.3934,0.15506,-8.9859,{"v":2.57e-19,"d":"2.57E-19"},2.57E-17,"full_name=lipoxygenase 2. lipoxygenase 2. Chloroplast lipoxygenase required for wound-induced jasmonic acid accumulation in Arabidopsis.Mutants are resistant to Staphylococcus aureus and accumulate salicylic acid upon infection."]
["AT3G53800","Fes1B",1617.8,1.5059,0.13272,11.347,{"v":7.71e-30,"d":"7.71E-30"},{"v":7.88e-28,"d":"7.88E-28"},"full_name=Fes1B. Fes1B. Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150).","AT5G62340",null,128.64,6.1151,0.52833,11.574,{"v":5.55e-31,"d":"5.55E-31"},{"v":5.66e-29,"d":"5.66E-29"},"Plant invertase/pectin methylesterase inhibitor superfamily protein.","AT5G61790","CNX1",1239.2,-1.5424,0.17198,-8.9683,{"v":3.01e-19,"d":"3.01E-19"},{"v":3.01e-17,"d":"3.01E-17"},"full_name=calnexin 1. calnexin 1."]
["AT1G20620","CAT3",15303,1.3031,0.11486,11.345,{"v":7.87e-30,"d":"7.87E-30"},{"v":8.01e-28,"d":"8.01E-28"},"full_name=catalase 3. catalase 3. Catalase, catalyzes the breakdown of hydrogen peroxide (H2O2) into water and oxygen.","AT4G03050","AOP3",313.83,-5.2753,0.45653,-11.555,{"v":6.97e-31,"d":"6.97E-31"},7.06E-29,"2-oxoglutarate-dependent dioxygenase. Transcriptional silent in leaf tissues of ecotype Col. The transcribed allele in ecotype Ler encodes a 2-oxoglutarate-dependent dioxygenase which is involved in glucosinolate biosynthesis. The natural variation in this locus explains the diversification of hydroxyalkyl glucosinolates among different ecotypes of Arabidopsis.","AT3G16420","PBP1",9367.2,-0.98127,0.10956,-8.956,{"v":3.37e-19,"d":"3.37E-19"},{"v":3.34e-17,"d":"3.34E-17"},"full_name=PYK10-binding protein 1. PYK10-binding protein 1. The PBP1(PYK10-binding protein 1) assists the PYK10 (beta-glucosidase complex) in its activity and may act like a molecular chaperone that facilitates the correct polymerization of PYK10, when tissues are damaged and subcellular structures are destroyed by pests."]
["AT3G43270",null,1251.8,-1.425,0.1257,-11.337,{"v":8.61e-30,"d":"8.61E-30"},{"v":8.71e-28,"d":"8.71E-28"},"Plant invertase/pectin methylesterase inhibitor superfamily.","AT5G59130",null,630.86,2.4362,0.2111,11.54,{"v":8.25e-31,"d":"8.25E-31"},{"v":8.31e-29,"d":"8.31E-29"},"Subtilase family protein.","AT2G17840","ERD7",1309.6,1.8566,0.20741,8.9516,{"v":3.5e-19,"d":"3.50E-19"},{"v":3.46e-17,"d":"3.46E-17"},"full_name=EARLY-RESPONSIVE TO DEHYDRATION 7. Senescence/dehydration-associated protein-like protein. Identified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis."]
["AT4G39350","CESA2",765.12,-1.5783,0.13923,-11.336,{"v":8.73e-30,"d":"8.73E-30"},{"v":8.78e-28,"d":"8.78E-28"},"full_name=cellulose synthase A2. cellulose synthase A2. Encodes a cellulose synthase isomer, related to CESA6. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.","AT3G51895","SULTR3;1",228.83,-2.9585,0.25644,-11.537,{"v":8.6E-31,"d":"8.60E-31"},{"v":8.62e-29,"d":"8.62E-29"},"full_name=sulfate transporter 3;1. sulfate transporter 3;1. Encodes a chloroplast-localized sulfate transporter.","AT1G44446","CH1",657.28,1.4991,0.16748,8.9506,3.54E-19,{"v":3.47e-17,"d":"3.47E-17"},"full_name=CHLORINA 1. Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein. Encodes chlorophyllide <i>a</i> oxygenase which converts chlorophyllide <i>a</i> to chlorophyllide <i>b</i> by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide <i>a</i> . Mutants are deficient in pigments that associate with thylakoid membrane proteins, lacking chlorophyll <i>b</i> and light-harvesting proteins of photosystem II. The protein was shown through cross-linking experiments to interact with Toc75, Toc34, Tic40, Tic20 and Tic22."]
["AT3G26330","CYP71B37",570.65,-1.8554,0.16371,-11.334,{"v":8.93e-30,"d":"8.93E-30"},{"v":8.94e-28,"d":"8.94E-28"},"full_name=cytochrome P450, family 71, subfamily B, polypeptide 37. cytochrome P450, family 71, subfamily B, polypeptide 37. putative cytochrome P450","AT4G13010","CEQORH",879.2,-1.5805,0.13743,-11.5,1.32E-30,{"v":1.31e-28,"d":"1.31E-28"},"Oxidoreductase, zinc-binding dehydrogenase family protein.","AT3G51910","HSFA7A",106.16,3.4309,0.38511,8.909,{"v":5.15e-19,"d":"5.15E-19"},{"v":5.03e-17,"d":"5.03E-17"},"full_name=heat shock transcription factor A7A. heat shock transcription factor A7A. member of Heat Stress Transcription Factor (Hsf) family"]
["AT1G05450",null,187.68,-3.4017,0.3002,-11.332,{"v":9.15e-30,"d":"9.15E-30"},{"v":9.11e-28,"d":"9.11E-28"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein. Encodes a Protease inhibitor/seed storage/LTP family protein","AT5G50750","RGP4",175.36,-4.0477,0.3526,-11.479,1.67E-30,1.66E-28,"full_name=reversibly glycosylated polypeptide 4. reversibly glycosylated polypeptide 4. RGP4 is a reversibly glycosylated polypeptide. Analyses using tagged RGP4 suggest that it is present in the cytosol and in association with the Golgi apparatus. Recombinant RGP4 does not have UDP-arabinose mutase activity based on an in vitro assay even though the related RGP1, RGP2, and RGP3 proteins do have activity in the same assay. RGP4 can form complexes with RGP1 and RGP2. RGP4 is expressed during seed development.","AT1G23310","GGT1",2489.2,1.2698,0.14282,8.8909,{"v":6.06e-19,"d":"6.06E-19"},{"v":5.89e-17,"d":"5.89E-17"},"full_name=glutamate:glyoxylate aminotransferase. glutamate:glyoxylate aminotransferase. Identified by cloning the gene that corresponded to a purified protein having glyoxylate aminotransferase activity. Localized to the peroxisome and thought to be involved in photorespiration/ metabolic salvage pathway."]
["AT4G33820",null,498.29,-2.1019,0.18551,-11.331,{"v":9.27e-30,"d":"9.27E-30"},9.18E-28,"Glycosyl hydrolase superfamily protein.","AT1G56340","CRT1a",1900.2,1.2805,0.11156,11.478,{"v":1.7e-30,"d":"1.70E-30"},1.67E-28,"full_name=calreticulin 1a. calreticulin 1a. Encodes one of three Arabidopsis calreticulins. In CRT-deficient mouse fibroblasts, this protein restores ER Ca2+ levels.","AT5G60790","ABCF1",3906.3,1.2027,0.1355,8.8763,{"v":6.91e-19,"d":"6.91E-19"},{"v":6.68e-17,"d":"6.68E-17"},"full_name=ATP-binding cassette F1. ABC transporter family protein. member of GCN subfamily"]
["AT4G14980",null,527.53,-2.2483,0.19877,-11.311,1.16E-29,{"v":1.14e-27,"d":"1.14E-27"},"Cysteine/Histidine-rich C1 domain family protein.","AT1G43160","RAP2.6",173.38,-5.2829,0.46037,-11.475,{"v":1.76e-30,"d":"1.76E-30"},{"v":1.72e-28,"d":"1.72E-28"},"full_name=related to AP2 6. related to AP2 6. encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family (RAP2.6). The protein contains one AP2 domain. There are 7 members in this subfamily.","AT5G65470",null,532.22,2.073,0.23363,8.8728,{"v":7.13e-19,"d":"7.13E-19"},{"v":6.86e-17,"d":"6.86E-17"},"O-fucosyltransferase family protein."]
["AT3G62550",null,197.18,4.9494,0.4377,11.308,{"v":1.2E-29,"d":"1.20E-29"},1.18E-27,"Adenine nucleotide alpha hydrolases-like superfamily protein.","AT1G65820",null,1945.3,-1.2302,0.10768,-11.424,{"v":3.17e-30,"d":"3.17E-30"},{"v":3.1e-28,"d":"3.10E-28"},"microsomal glutathione s-transferase.","AT2G33590","CRL1",554.76,1.4981,0.16901,8.8643,{"v":7.7e-19,"d":"7.70E-19"},{"v":7.37e-17,"d":"7.37E-17"},"full_name=CCR(Cinnamoyl coA:NADP oxidoreductase)-like 1. NAD(P)-binding Rossmann-fold superfamily protein. Encodes a protein with homology to members of the dihydroflavonol-4-reductase (DFR) superfamily. The expression pattern of AtCRL1 indicates that CRL1 has a role in embryogenesis and seed germination. AtCRL1 is induced by ABA, drought and heat, and is highly expressed in seeds."]
["AT4G23850","LACS4",1171.7,-1.2749,0.11277,-11.305,1.24E-29,{"v":1.21e-27,"d":"1.21E-27"},"full_name=long-chain acyl-CoA synthetase 4. AMP-dependent synthetase and ligase family protein.","AT5G05290","EXPA2",493.73,-2.17,0.19041,-11.396,{"v":4.37e-30,"d":"4.37E-30"},{"v":4.24e-28,"d":"4.24E-28"},"full_name=expansin A2. expansin A2. Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)","AT2G18570",null,1136.6,2.1085,0.23822,8.8512,{"v":8.66e-19,"d":"8.66E-19"},{"v":8.24e-17,"d":"8.24E-17"},"UDP-Glycosyltransferase superfamily protein."]
["AT2G36580",null,1616.6,-1.1437,0.1013,-11.291,{"v":1.46e-29,"d":"1.46E-29"},1.42E-27,"Pyruvate kinase family protein.","AT2G43535",null,906.46,-2.2535,0.19802,-11.38,5.26E-30,{"v":5.08e-28,"d":"5.08E-28"},"Scorpion toxin-like knottin superfamily protein. Encodes a defensin-like (DEFL) family protein.","AT5G45650",null,308.19,-2.2949,0.25943,-8.846,{"v":9.07e-19,"d":"9.07E-19"},{"v":8.59e-17,"d":"8.59E-17"},"subtilase family protein."]
["AT1G09200","H3.1",338.31,2.1833,0.19351,11.283,{"v":1.59e-29,"d":"1.59E-29"},1.54E-27,"Histone superfamily protein.","AT5G67300","MYBR1",688.38,-2.3328,0.20525,-11.366,{"v":6.21e-30,"d":"6.21E-30"},5.97E-28,"full_name=myb domain protein r1. myb domain protein r1. Member of the R2R3 factor MYB gene family involved in mediating plant responses to a variety of abiotic stimiuli.","AT1G28330","DYL1",5557.3,1.2081,0.1369,8.8246,{"v":1.1e-18,"d":"1.10E-18"},1.04E-16,"full_name=dormancy-associated protein-like 1. dormancy-associated protein-like 1. dormancy-associated protein (DRM1)"]
["AT3G49780","PSK4",257.06,-3.4909,0.31,-11.261,{"v":2.04e-29,"d":"2.04E-29"},{"v":1.96e-27,"d":"1.96E-27"},"full_name=phytosulfokine 4 precursor. phytosulfokine 4 precursor. Phytosulfokine 3 precursor, coding for a unique plant peptide growth factor. Plants overexpressing this gene (under a 35S promoter), develop normal cotyledons and hypocotyls but their growth, in particular that of their roots, was faster than that of wildtype.","AT4G40040","H3.3",1946.4,-1.6715,0.14717,-11.357,6.83E-30,{"v":6.53e-28,"d":"6.53E-28"},"Histone superfamily protein.","AT5G02840","LCL1",392.76,1.9321,0.21912,8.8175,{"v":1.17e-18,"d":"1.17E-18"},{"v":1.1E-16,"d":"1.10E-16"},"full_name=LHY/CCA1-like 1. LHY/CCA1-like 1. CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis."]
["AT5G16240","AAD1",561.66,-2.3923,0.21343,-11.208,3.71E-29,{"v":3.54e-27,"d":"3.54E-27"},"Plant stearoyl-acyl-carrier-protein desaturase family protein.","AT2G15010",null,295.19,-3.7564,0.33147,-11.333,{"v":9.05e-30,"d":"9.05E-30"},{"v":8.61e-28,"d":"8.61E-28"},"Plant thionin. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.","AT4G19810","ChiC",88.241,3.9019,0.44303,8.8073,{"v":1.28e-18,"d":"1.28E-18"},{"v":1.2E-16,"d":"1.20E-16"},"full_name=class V chitinase. Glycosyl hydrolase family protein with chitinase insertion domain-containing protein. ChiC encodes a Class V chitinase that is a part of glycoside hydrolase family 18 based on CAZy groupings. It appears to primarily act as an exochitinase in vitro where it predominantly cleaves a chitobiose (GlcNAc)2 residue from the non-reducing end of a chitin oligosaccharide. However, it shows some minor endochitinase activity in vitro, as well. A putative 24 amino-acid signal peptide may direct this protein to the secretory system and it has been detected in cell wall apoplastic fluid. RT-PCR experiments demonstrate that ChiC transcript levels are increased in response to abscisisc acid, jasmonic acid, and NaCl stress. Microarray results also suggest that transcript levels rise in response to osmotic stress, two fungal pathogens, a bacterial pathogen, and the elicitor flagellin."]
["AT4G09030","AGP10",3642.1,-1.1657,0.10405,-11.203,{"v":3.92e-29,"d":"3.92E-29"},{"v":3.73e-27,"d":"3.73E-27"},"full_name=arabinogalactan protein 10. arabinogalactan protein 10. Encodes arabinogalactan protein (AGP10).","AT5G35630","GS2",1632.7,1.494,0.13236,11.288,{"v":1.51e-29,"d":"1.51E-29"},1.43E-27,"full_name=glutamine synthetase 2. glutamine synthetase 2. chloroplastic glutamine synthetase","AT1G68560","XYL1",4020.6,-1.3039,0.14811,-8.8036,{"v":1.32e-18,"d":"1.32E-18"},1.23E-16,"full_name=alpha-xylosidase 1. alpha-xylosidase 1. Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 3 of glycoside hydrolases."]
["AT2G17850",null,301.66,-2.9054,0.25938,-11.201,{"v":4.01e-29,"d":"4.01E-29"},{"v":3.79e-27,"d":"3.79E-27"},"Rhodanese/Cell cycle control phosphatase superfamily protein.","AT5G64040","PSAN",558.43,1.799,0.15948,11.28,{"v":1.65e-29,"d":"1.65E-29"},{"v":1.55e-27,"d":"1.55E-27"},"photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN). Encodes the only subunit of photosystem I located entirely in the thylakoid lumen. May be involved in the interaction between plastocyanin and the photosystem I complex. Phosphorylation of this protein is dependent on calcium.","AT3G53230","AtCDC48B",1035.1,1.6987,0.19321,8.792,{"v":1.47e-18,"d":"1.47E-18"},{"v":1.36e-16,"d":"1.36E-16"},"full_name=cell division cycle 48B. ATPase, AAA-type, CDC48 protein."]
["AT5G24930","COL4",1481.2,-1.7563,0.15704,-11.184,{"v":4.9e-29,"d":"4.90E-29"},{"v":4.61e-27,"d":"4.61E-27"},"full_name=CONSTANS-like 4. zinc finger CONSTANS-like protein.","AT5G54960","PDC2",691.51,-1.822,0.16194,-11.251,{"v":2.29e-29,"d":"2.29E-29"},{"v":2.14e-27,"d":"2.14E-27"},"full_name=pyruvate decarboxylase-2. pyruvate decarboxylase-2. pyruvate decarboxylase-2","AT1G68590","PSRP3/1",957.18,-1.3579,0.15452,-8.7879,1.52E-18,{"v":1.4e-16,"d":"1.40E-16"},"full_name=plastid-speci&#64257;c ribosomal protein 3/1. Ribosomal protein PSRP-3/Ycf65."]
["AT4G00380","FDM2",1025.5,-1.473,0.13228,-11.135,{"v":8.43e-29,"d":"8.43E-29"},{"v":7.89e-27,"d":"7.89E-27"},"full_name=factor of DNA methylation 2. XH/XS domain-containing protein. Belongs to a subgroup of SGS3-like proteins that act redundantly in RNA-directed DNA methylation: AT1G15910 (FDM1), AT4G00380 (FDM2), AT3G12550 (FDM3), AT1G13790 (FDM4), AT1G80790 (FDM5).","AT1G04680",null,221.36,2.5834,0.22983,11.24,{"v":2.58e-29,"d":"2.58E-29"},{"v":2.41e-27,"d":"2.41E-27"},"Pectin lyase-like superfamily protein.","AT1G30360","ERD4",1231.9,1.5114,0.17203,8.786,1.55E-18,{"v":1.42e-16,"d":"1.42E-16"},"full_name=early-responsive to dehydration 4. Early-responsive to dehydration stress protein (ERD4)."]
["AT5G09640","SCPL19",1349.6,-2.5553,0.22967,-11.126,{"v":9.38e-29,"d":"9.38E-29"},{"v":8.74e-27,"d":"8.74E-27"},"full_name=serine carboxypeptidase-like 19. serine carboxypeptidase-like 19. encodes a serine carboxypeptidase-like (SCPL) protein. Mutants accumulate sinapoylglucose instead of sinapoylcholine, and have increased levels of choline and decreased activity of the enzyme sinapoylglucose:choline sinapoyltransferase.","AT1G54570","PES1",731.48,-1.5999,0.14253,-11.225,{"v":3.06e-29,"d":"3.06E-29"},{"v":2.84e-27,"d":"2.84E-27"},"full_name=phytyl ester synthase 1. Esterase/lipase/thioesterase family protein. Encodes a protein with phytyl ester synthesis and diacylglycerol acyltransferase activities that is involved in the deposition of free phytol and free fatty acids in the form of phytyl esters in chloroplasts, a process involved in maintaining the integrity of the photosynthetic membrane during abiotic stress and senescence.","AT1G78820",null,393.51,1.8091,0.20597,8.7836,{"v":1.58e-18,"d":"1.58E-18"},1.44E-16,"D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein."]
["AT1G68170","UMAMIT23",238.67,-2.4887,0.2237,-11.125,{"v":9.48e-29,"d":"9.48E-29"},{"v":8.79e-27,"d":"8.79E-27"},"full_name=Usually multiple acids move in and out Transporters 23. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT3G54500","LNK2",490.12,-1.8638,0.16642,-11.2,{"v":4.1e-29,"d":"4.10E-29"},{"v":3.79e-27,"d":"3.79E-27"},"agglutinin-like protein.","AT4G39950","CYP79B2",204.97,-2.2598,0.25732,-8.782,{"v":1.61e-18,"d":"1.61E-18"},{"v":1.45e-16,"d":"1.45E-16"},"full_name=cytochrome P450, family 79, subfamily B, polypeptide 2. cytochrome P450, family 79, subfamily B, polypeptide 2. Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates."]
["AT4G04830","MSRB5",354.4,2.5153,0.22615,11.122,{"v":9.78e-29,"d":"9.78E-29"},{"v":9.02e-27,"d":"9.02E-27"},"full_name=methionine sulfoxide reductase B5. methionine sulfoxide reductase B5.","AT3G50820","PSBO2",1231.6,1.8988,0.17075,11.12,{"v":9.98e-29,"d":"9.98E-29"},{"v":9.17e-27,"d":"9.17E-27"},"full_name=photosystem II subunit O-2. photosystem II subunit O-2. Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In <i>Arabidopsis thaliana</i> the PsbO proteins are encoded by two genes: <i>psbO1</i> and <i>psbO2</i>. PsbO2 is the minor isoform in the wild-type. Mutants defective in this gene have been shown to be affected in the dephosphorylation of the D1 protein of PSII.","AT4G00430","PIP1;4",1136.8,1.3241,0.15089,8.7756,{"v":1.7E-18,"d":"1.70E-18"},1.53E-16,"full_name=plasma membrane intrinsic protein 1;4. plasma membrane intrinsic protein 1;4. a member of the plasma membrane intrinsic protein subfamily PIP1."]
["AT5G62190","PRH75",9006.5,0.82906,0.074899,11.069,{"v":1.77e-28,"d":"1.77E-28"},1.63E-26,"DEAD box RNA helicase (PRH75). DEAD/DEAH box RNA helicase PRH75","AT5G67480","BT4",1541.1,-1.4719,0.13239,-11.118,1.02E-28,{"v":9.35e-27,"d":"9.35E-27"},"full_name=BTB and TAZ domain protein 4. BTB and TAZ domain protein 4. BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.","AT1G62380","ACO2",326.68,-1.9595,0.2234,-8.7709,{"v":1.77e-18,"d":"1.77E-18"},1.59E-16,"full_name=ACC oxidase 2. ACC oxidase 2. Encodes a protein similar to 1-aminocyclopropane-1-carboxylic oxidase (ACC oxidase). Expression of the AtACO2 transcripts is affected by ethylene."]
["AT3G53670",null,512.56,1.7076,0.15429,11.067,{"v":1.81e-28,"d":"1.81E-28"},{"v":1.65e-26,"d":"1.65E-26"},"hypothetical protein.","AT2G37760","AKR4C8",510.58,-1.8299,0.16467,-11.113,1.09E-28,{"v":9.91e-27,"d":"9.91E-27"},"full_name=Aldo-keto reductase family 4 member C8. NAD(P)-linked oxidoreductase superfamily protein. Encodes an NADPH-dependent aldo-keto reductase that can act on a wide variety of substrates in vitro including aliphatic and aromatic aldehydes and steroids. Transcript levels for this gene are up-regulated in response to cold, salt, and drought stress.","AT5G53970","TAT7",255.05,2.3896,0.27262,8.7654,{"v":1.86e-18,"d":"1.86E-18"},{"v":1.66e-16,"d":"1.66E-16"},"full_name=tyrosine aminotransferase 7. Tyrosine transaminase family protein. encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment"]
["AT2G18440","GUT15",3970.4,0.98759,0.089393,11.048,{"v":2.25e-28,"d":"2.25E-28"},2.04E-26,"other_RNA. Encodes a noncoding RNA, a member of an emerging class of transcripts that lack significant open reading frames and encode RNA as their final product.","AT1G15825",null,314.1,-2.3651,0.21289,-11.11,1.13E-28,1.02E-26,"hydroxyproline-rich glycoprotein family protein.","AT1G13640",null,1173.5,1.5893,0.18132,8.7651,{"v":1.87e-18,"d":"1.87E-18"},{"v":1.66e-16,"d":"1.66E-16"},"Phosphatidylinositol 3- and 4-kinase family protein."]
["AT2G28000","CPN60A",7144.6,1.0375,0.094083,11.027,{"v":2.83e-28,"d":"2.83E-28"},{"v":2.56e-26,"d":"2.56E-26"},"full_name=chaperonin-60alpha. chaperonin-60alpha. Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development.","AT4G16160","ATOEP16-2",1365.3,-2.5769,0.2321,-11.103,1.22E-28,{"v":1.1E-26,"d":"1.10E-26"},"Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein. Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family. Two OEP16 genes are closely related to each other and are conserved in all land plants, OEP16-2, also named OEP16-S, and OEP16-1 (renamed OEP16-L) are result of the gene duplication event that occurred prior to divergence of bryophytes and seed plants. Predominantly expressed in seed and is not inducible by cold treatment. atOEP16-S gained an additional exon. The promoter region of atOEP16-S (but not atOEP16-L) contains multiple G-box ABA-responsive elements. The atOEP16-S promoter conferred developmentally regulated seed- and pollen-specific GUS expression in tobacco.","AT2G39800","P5CS1",6226.6,1.7106,0.19545,8.752,{"v":2.1E-18,"d":"2.10E-18"},1.85E-16,"full_name=delta1-pyrroline-5-carboxylate synthase 1. delta1-pyrroline-5-carboxylate synthase 1. encodes a delta1-pyrroline-5-carboxylate synthase that catalyzes the rate-limiting enzyme in the biosynthesis of proline. Gene is expressed in reproductive organs and tissues under non-stress conditions but in the whole plant under water-limiting condition. Expression is also induced by abscisic acid and salt stress in a light-dependent manner. encodes a delta1-pyrroline-5-carboxylate synthase that catalyzes the rate-limiting enzyme in the biosynthesis of proline. Gene is expressed in reproductive organs and tissues under non-stress conditions but in the whole plant under water-limiting condition. Expression is also induced by abscisic acid and salt stress in a light-dependent manner. P5CS1 appears to be involved in salt stress responses related to proline accumulation, including protection from reactive oxidative species. P5CS1 appears to be present in different cells and/or different subcellular locations from P5CS2 in a tissue-dependent manner."]
["AT2G47000","ABCB4",295.56,2.5245,0.22933,11.008,{"v":3.48e-28,"d":"3.48E-28"},{"v":3.14e-26,"d":"3.14E-26"},"full_name=ATP-binding cassette B4. ATP binding cassette subfamily B4. Encodes an auxin efflux transmembrane transporter that is a member of the multidrug resistance P-glycoprotein (MDR/PGP) subfamily of ABC transporters. Functions in the basipetal redirection of auxin from the root tip. Exhibits apolar plasma membrane localization in the root cap and polar localization in tissues above and is involved in root hair elongation.","AT5G45670",null,449.6,2.9083,0.26213,11.095,{"v":1.33e-28,"d":"1.33E-28"},{"v":1.19e-26,"d":"1.19E-26"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT2G37970","SOUL-1",730.79,2.3453,0.26821,8.7443,2.24E-18,1.97E-16,"SOUL heme-binding family protein."]
["AT1G07870",null,356.25,-2.0849,0.18953,-11.001,{"v":3.79e-28,"d":"3.79E-28"},{"v":3.4e-26,"d":"3.40E-26"},"Protein kinase superfamily protein.","AT3G04000",null,230.41,-2.7681,0.24989,-11.077,1.62E-28,{"v":1.44e-26,"d":"1.44E-26"},"NAD(P)-binding Rossmann-fold superfamily protein. ChlADR is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on saturated and alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. The N-terminal region of this protein directs GFP to the chloroplast where where ChlADR likely helps to maintain the photosynthetic process by detoxifying reactive carbonyls formed during lipid peroxidation. In addition, this enzyme can also reduce cis-3-hexenal, a major plant volatile compound that contributes to green leaf odor, as well as methylglyoxal in vitro.","AT3G50330","HEC2",205.87,-2.5372,0.29031,-8.7398,{"v":2.33e-18,"d":"2.33E-18"},{"v":2.04e-16,"d":"2.04E-16"},"full_name=HECATE 2. basic helix-loop-helix (bHLH) DNA-binding superfamily protein."]
["AT5G25190","ESE3",344.08,2.1404,0.19495,10.979,{"v":4.81e-28,"d":"4.81E-28"},{"v":4.29e-26,"d":"4.29E-26"},"full_name=ethylene and salt inducible 3. Integrase-type DNA-binding superfamily protein. encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.","AT5G44340","TUB4",2240.2,1.1299,0.10201,11.077,1.63E-28,{"v":1.45e-26,"d":"1.45E-26"},"full_name=tubulin beta chain 4. tubulin beta chain 4. beta tubulin gene","AT1G07470",null,502.82,1.6802,0.19231,8.7369,{"v":2.4e-18,"d":"2.40E-18"},{"v":2.09e-16,"d":"2.09E-16"},"Transcription factor IIA, alpha/beta subunit."]
["AT5G24316",null,188.71,-4.5579,0.41617,-10.952,{"v":6.51e-28,"d":"6.51E-28"},{"v":5.78e-26,"d":"5.78E-26"},"proline-rich family protein.","AT3G25290",null,231.67,-2.7831,0.25131,-11.074,{"v":1.68e-28,"d":"1.68E-28"},{"v":1.48e-26,"d":"1.48E-26"},"Auxin-responsive family protein.","AT2G01340","At17.1",341.68,2.1222,0.24327,8.7236,{"v":2.69e-18,"d":"2.69E-18"},{"v":2.34e-16,"d":"2.34E-16"},"plastid movement impaired protein. Encodes a protein whose expression is responsive to nematode infection."]
["AT1G19540",null,1069.7,-1.6916,0.15455,-10.945,{"v":7e-28,"d":"7.00E-28"},{"v":6.18e-26,"d":"6.18E-26"},"NmrA-like negative transcriptional regulator family protein.","AT1G55670","PSAG",1761.3,1.4062,0.12731,11.045,2.31E-28,2.04E-26,"full_name=photosystem I subunit G. photosystem I subunit G. Encodes subunit G of photosystem I, an 11-kDa membrane protein that plays an important role in electron transport between plastocyanin and PSI and is involved in the stability of the PSI complex. PSI-G subunit is bound to PSI-B and is in contact with Lhca1. The protein inserts into thylakoids by a direct or spontaneous pathway that does not involve the activities of any known chloroplast protein-targeting machinery. PSI-G appears to be directly or indirectly involved in the interaction between Photosystem I and plastocyanin.","AT1G52870",null,680.19,1.5006,0.17273,8.6876,{"v":3.7e-18,"d":"3.70E-18"},{"v":3.19e-16,"d":"3.19E-16"},"Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein."]
["AT2G19590","ACO1",731.39,-1.5831,0.14508,-10.912,{"v":1.01e-27,"d":"1.01E-27"},{"v":8.87e-26,"d":"8.87E-26"},"full_name=ACC oxidase 1. ACC oxidase 1. encodes a protein whose sequence is similar to 1-aminocyclopropane-1-carboxylate oxidase","AT5G18470",null,243.19,-2.7108,0.24556,-11.039,2.47E-28,{"v":2.17e-26,"d":"2.17E-26"},"Curculin-like (mannose-binding) lectin family protein.","AT1G14440","HB31",261.39,-2.0417,0.2356,-8.666,4.48E-18,{"v":3.85e-16,"d":"3.85E-16"},"full_name=homeobox protein 31. homeobox protein 31."]
["AT2G10940",null,215.62,-3.0211,0.27726,-10.896,{"v":1.2E-27,"d":"1.20E-27"},1.05E-25,"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT5G07830","GUS2",1021.5,-1.5531,0.14112,-11.005,3.61E-28,{"v":3.15e-26,"d":"3.15E-26"},"full_name=glucuronidase 2. glucuronidase 2. Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-&#946;-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be membrane-associated. It is involved in cell elongation.","AT2G13360","AGT",1222.8,1.5732,0.18175,8.6555,{"v":4.91e-18,"d":"4.91E-18"},4.19E-16,"full_name=alanine:glyoxylate aminotransferase. alanine:glyoxylate aminotransferase. Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration."]
["AT4G18910","NIP1;2",833.44,-1.3737,0.12617,-10.888,{"v":1.32e-27,"d":"1.32E-27"},1.15E-25,"full_name=NOD26-like intrinsic protein 1;2. NOD26-like intrinsic protein 1;2. Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells.","AT3G23800","SBP3",401.39,1.9981,0.18208,10.973,{"v":5.14e-28,"d":"5.14E-28"},4.46E-26,"full_name=selenium-binding protein 3. selenium-binding protein 3.","AT5G07330",null,104.69,3.9976,0.46307,8.6329,{"v":5.98e-18,"d":"5.98E-18"},{"v":5.09e-16,"d":"5.09E-16"},"NFU1 iron-sulfur cluster protein."]
["AT5G08610","PDE340",1237.9,1.4474,0.13302,10.882,{"v":1.41e-27,"d":"1.41E-27"},1.22E-25,"full_name=PIGMENT DEFECTIVE 340. P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT5G15780",null,5311.7,-1.419,0.12934,-10.971,{"v":5.27e-28,"d":"5.27E-28"},{"v":4.56e-26,"d":"4.56E-26"},"Pollen Ole e 1 allergen and extensin family protein.","AT2G18160","bZIP2",296.52,-2.5485,0.29542,-8.6267,{"v":6.32e-18,"d":"6.32E-18"},{"v":5.35e-16,"d":"5.35E-16"},"full_name=basic leucine-zipper 2. basic leucine-zipper 2. Encodes a b-ZIP transcription factor."]
["AT5G61790","CNX1",2439.6,-0.99343,0.091578,-10.848,2.04E-27,{"v":1.76e-25,"d":"1.76E-25"},"full_name=calnexin 1. calnexin 1.","AT3G62090","PIL2",599.43,-1.8271,0.16721,-10.927,{"v":8.59e-28,"d":"8.59E-28"},{"v":7.39e-26,"d":"7.39E-26"},"full_name=phytochrome interacting factor 3-like 2. phytochrome interacting factor 3-like 2. encodes a novel Myc-related bHLH transcription factor, which physically associated with APRR1/TOC1 and is a member of PIF3 transcription factor family.","AT4G11220","BTI2",737.71,1.4433,0.16768,8.6074,{"v":7.48e-18,"d":"7.48E-18"},{"v":6.3e-16,"d":"6.30E-16"},"full_name=VIRB2-interacting protein 2. VIRB2-interacting protein 2."]
["AT1G62333",null,640.58,-2.2524,0.20782,-10.838,{"v":2.27e-27,"d":"2.27E-27"},1.95E-25,"hypothetical protein.","AT5G66170","STR18",2112.3,-1.2892,0.11801,-10.925,{"v":8.76e-28,"d":"8.76E-28"},{"v":7.5e-26,"d":"7.50E-26"},"full_name=sulfurtransferase 18. sulfurtransferase 18. Encodes a thiosulfate sulfurtransferase/rhodanese.","AT5G04250",null,200.49,2.1929,0.25503,8.5986,{"v":8.07e-18,"d":"8.07E-18"},{"v":6.78e-16,"d":"6.78E-16"},"Cysteine proteinases superfamily protein."]
["AT4G19410","PAE7",1353.1,-1.1943,0.11022,-10.835,{"v":2.35e-27,"d":"2.35E-27"},2.01E-25,"Pectinacetylesterase family protein.","AT2G38870",null,246.33,-2.7274,0.25007,-10.907,{"v":1.07e-27,"d":"1.07E-27"},{"v":9.14e-26,"d":"9.14E-26"},"Serine protease inhibitor, potato inhibitor I-type family protein. Predicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860.","AT3G26580",null,852.91,1.5481,0.18015,8.5934,{"v":8.45e-18,"d":"8.45E-18"},{"v":7.06e-16,"d":"7.06E-16"},"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT3G10200",null,1287.1,-1.3958,0.12923,-10.801,3.41E-27,2.91E-25,"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT3G04520","THA2",678.71,-1.5871,0.14566,-10.896,{"v":1.2E-27,"d":"1.20E-27"},1.02E-25,"full_name=threonine aldolase 2. threonine aldolase 2. Encodes a threonine aldolase, involved in threonine degradation to glycine. Expressed in vascular tissue through out the plant.","AT1G01720","ATAF1",450.8,1.9395,0.22582,8.5886,{"v":8.81e-18,"d":"8.81E-18"},{"v":7.33e-16,"d":"7.33E-16"},"NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA."]
["AT4G27140","SESA1",6024.5,-1.2596,0.1169,-10.775,{"v":4.5e-27,"d":"4.50E-27"},{"v":3.81e-25,"d":"3.81E-25"},"full_name=seed storage albumin 1. seed storage albumin 1.","AT3G51430","YLS2",755.33,-1.8522,0.17021,-10.882,{"v":1.4E-27,"d":"1.40E-27"},{"v":1.19e-25,"d":"1.19E-25"},"full_name=YELLOW-LEAF-SPECIFIC GENE 2. Calcium-dependent phosphotriesterase superfamily protein. Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.","AT5G47640","NF-YB2",375.06,1.6789,0.19587,8.5718,1.02E-17,{"v":8.44e-16,"d":"8.44E-16"},"full_name=nuclear factor Y, subunit B2. nuclear factor Y, subunit B2."]
["AT5G41460",null,688.75,-1.6298,0.15133,-10.77,{"v":4.75e-27,"d":"4.75E-27"},{"v":4.01e-25,"d":"4.01E-25"},"transferring glycosyl group transferase (DUF604).","AT2G35190","NPSN11",290.65,2.1477,0.1974,10.88,{"v":1.44e-27,"d":"1.44E-27"},1.21E-25,"full_name=novel plant snare 11. Putative plant snare 11. plant-specific SNARE located in cell plate of dividing cells. cofractionates with the cytokinesis-specific syntaxin, KNOLLE, which is required for the formation of the cell plate.","AT1G73680","ALPHA DOX2",407.74,1.8568,0.21705,8.5548,1.18E-17,{"v":9.73e-16,"d":"9.73E-16"},"full_name=alpha dioxygenase. alpha dioxygenase. Encodes an alpha dioxygenase. Recombinant protein catalyzes the conversion of a wide range of fatty acids into 2(R)-hydroperoxy derivatives."]
["AT4G29060","emb2726",3896.2,1.1414,0.10616,10.751,{"v":5.86e-27,"d":"5.86E-27"},{"v":4.92e-25,"d":"4.92E-25"},"full_name=embryo defective 2726. elongation factor Ts family protein.","AT1G70840","MLP31",149.97,-4.9554,0.45619,-10.863,{"v":1.74e-27,"d":"1.74E-27"},1.45E-25,"full_name=MLP-like protein 31. MLP-like protein 31.","AT1G69252",null,1005.8,1.9744,0.2316,8.525,1.53E-17,1.25E-15,"other_RNA."]
["AT5G44360","ATBBE23",275.62,-2.7347,0.25448,-10.747,{"v":6.15e-27,"d":"6.15E-27"},{"v":5.15e-25,"d":"5.15E-25"},"FAD-binding Berberine family protein.","AT5G66280","GMD1",105.66,4.8143,0.444,10.843,2.15E-27,1.79E-25,"full_name=GDP-D-mannose 4,6-dehydratase 1. GDP-D-mannose 4,6-dehydratase 1. GDP-D-mannose 4,6-dehydratase","AT1G36730",null,2744.8,1.0832,0.12719,8.5163,1.65E-17,1.35E-15,"Translation initiation factor IF2/IF5."]
["AT5G16230","AAD3",337.82,-2.9873,0.27812,-10.741,{"v":6.52e-27,"d":"6.52E-27"},{"v":5.44e-25,"d":"5.44E-25"},"Plant stearoyl-acyl-carrier-protein desaturase family protein.","AT3G47470","LHCA4",3277.3,1.3926,0.12845,10.841,{"v":2.2e-27,"d":"2.20E-27"},{"v":1.82e-25,"d":"1.82E-25"},"full_name=light-harvesting chlorophyll-protein complex I subunit A4. light-harvesting chlorophyll-protein complex I subunit A4. Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins.","AT4G22010","sks4",429.66,-1.6151,0.18984,-8.5078,1.77E-17,{"v":1.44e-15,"d":"1.44E-15"},"full_name=SKU5 similar 4. SKU5 similar 4."]
["AT4G35830","ACO1",4409.5,-1.3349,0.12443,-10.729,{"v":7.46e-27,"d":"7.46E-27"},{"v":6.19e-25,"d":"6.19E-25"},"full_name=aconitase 1. aconitase 1. Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. This enzyme can also specifically bind to the 5' UTR of CSD2 in vitro.","AT2G47650","UXS4",716.97,1.8045,0.16663,10.829,{"v":2.5e-27,"d":"2.50E-27"},{"v":2.07e-25,"d":"2.07E-25"},"full_name=UDP-xylose synthase 4. UDP-xylose synthase 4. encodes a protein similar to UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.","AT1G62570","FMO GS-OX4",841.21,2.2208,0.26149,8.4929,{"v":2.01e-17,"d":"2.01E-17"},{"v":1.63e-15,"d":"1.63E-15"},"full_name=flavin-monooxygenase glucosinolate S-oxygenase 4. flavin-monooxygenase glucosinolate S-oxygenase 4. belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates"]
["AT1G17100","HBP1",3827.7,-1.0269,0.095775,-10.722,{"v":8.04e-27,"d":"8.04E-27"},{"v":6.64e-25,"d":"6.64E-25"},"full_name=haem-binding protein 1. SOUL heme-binding family protein.","AT1G64970","G-TMT",1683.1,1.8002,0.16706,10.776,{"v":4.46e-27,"d":"4.46E-27"},{"v":3.67e-25,"d":"3.67E-25"},"full_name=gamma-tocopherol methyltransferase. gamma-tocopherol methyltransferase. gamma-tocopherol methyltransferase (g-TMT) mRNA, nuclear; mutant has Deficient in alpha and beta tocopherol; Accumulates gamma tocopherol in leaves","AT3G59350",null,644.88,1.4273,0.16832,8.4795,2.26E-17,1.82E-15,"Protein kinase superfamily protein."]
["AT4G01330",null,509.02,-1.6458,0.15358,-10.716,{"v":8.57e-27,"d":"8.57E-27"},{"v":7.05e-25,"d":"7.05E-25"},"Protein kinase superfamily protein.","AT3G54920","PMR6",384.3,1.9092,0.17727,10.77,{"v":4.75e-27,"d":"4.75E-27"},3.89E-25,"full_name=powdery mildew resistant 6. Pectin lyase-like superfamily protein. Powdery mildew resistant mutant encodes a pectate lyase-like protein","AT5G25460","DGR2",2442.9,-1.2218,0.14423,-8.4712,{"v":2.43e-17,"d":"2.43E-17"},{"v":1.95e-15,"d":"1.95E-15"},"full_name=DUF642 L-GalL responsive gene 2. transmembrane protein, putative (Protein of unknown function, DUF642)."]
["AT1G54580","ACP2",1270.8,-1.2567,0.11732,-10.712,{"v":8.94e-27,"d":"8.94E-27"},{"v":7.32e-25,"d":"7.32E-25"},"full_name=acyl carrier protein 2. acyl carrier protein 2. encodes an acyl carrier protein expressed in leaves, roots, and dry seeds. Gene expression is not regulated by light but downregulated by starvation and upregulated by increased level of exogenous sucrose.","AT3G54960","PDIL1-3",652.02,1.6078,0.14962,10.746,{"v":6.2e-27,"d":"6.20E-27"},{"v":5.05e-25,"d":"5.05E-25"},"full_name=PDI-like 1-3. PDI-like 1-3. Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.","AT3G51240","F3H",2264.7,1.675,0.19833,8.4457,{"v":3.02e-17,"d":"3.02E-17"},{"v":2.42e-15,"d":"2.42E-15"},"full_name=flavanone 3-hydroxylase. flavanone 3-hydroxylase. Encodes flavanone 3-hydroxylase that is coordinately expressed with chalcone synthase and chalcone isomerases. Regulates flavonoid biosynthesis. Not responsive to auxin or ethylene stimulus (qRT-PCR)."]
["AT1G76990","ACR3",1132.7,-1.6888,0.15799,-10.689,{"v":1.14e-26,"d":"1.14E-26"},{"v":9.31e-25,"d":"9.31E-25"},"full_name=ACT domain repeat 3. ACT domain repeat 3.","AT1G09380","UMAMIT25",147.2,-4.1265,0.3841,-10.743,{"v":6.36e-27,"d":"6.36E-27"},{"v":5.17e-25,"d":"5.17E-25"},"full_name=Usually multiple acids move in and out Transporters 25. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT3G17790","PAP17",460.42,-2.2665,0.26905,-8.424,{"v":3.64e-17,"d":"3.64E-17"},{"v":2.9e-15,"d":"2.90E-15"},"full_name=purple acid phosphatase 17. purple acid phosphatase 17. Expression is upregulated in the shoot of cax1/cax3 mutant and is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots."]
["AT1G35190",null,1156.5,-1.4281,0.13415,-10.645,1.83E-26,1.49E-24,"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT4G24110",null,1718.1,-1.5267,0.14235,-10.725,{"v":7.79e-27,"d":"7.79E-27"},{"v":6.3e-25,"d":"6.30E-25"},"NADP-specific glutamate dehydrogenase.","AT2G29340",null,221.53,2.0843,0.2476,8.4178,{"v":3.83e-17,"d":"3.83E-17"},{"v":3.04e-15,"d":"3.04E-15"},"NAD-dependent epimerase/dehydratase family protein."]
["AT5G22500","FAR1",1189.5,1.9607,0.18426,10.641,1.92E-26,1.55E-24,"full_name=fatty acid reductase 1. fatty acid reductase 1. Encodes a member of the eight-member gene family encoding alcohol-forming fatty acyl-CoA reductases (FARs) identified in Arabidopsis thaliana. Three of the FARs, FAR1 (At5g22500), FAR4 (At3g44540) and FAR5 (At3g44550), are shown to generate the fatty alcohols found in root, seed coat, and wound-induced leaf tissue.","AT5G50790","SWEET10",185.81,-5.5204,0.5158,-10.703,{"v":9.88e-27,"d":"9.88E-27"},{"v":7.95e-25,"d":"7.95E-25"},"Nodulin MtN3 family protein. Encodes a member of the SWEET sucrose efflux transporter family proteins.","AT4G18660",null,97.591,3.6182,0.42986,8.4172,{"v":3.86e-17,"d":"3.86E-17"},{"v":3.04e-15,"d":"3.04E-15"},"delay of germination protein."]
["AT4G14430","IBR10",1328.1,-1.2415,0.11672,-10.637,{"v":2e-26,"d":"2.00E-26"},1.61E-24,"full_name=indole-3-butyric acid response 10. indole-3-butyric acid response 10. Encodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation. This enzyme might also be involved in the conversion of indole-3-butyric acid to indole-3-acetic acid via a beta-oxidation-like pathway.","AT3G14360","ATOBL1",1310.2,-2.1628,0.20235,-10.689,1.15E-26,{"v":9.22e-25,"d":"9.22E-25"},"alpha/beta-Hydrolases superfamily protein.","AT3G47960","GTR1",617.83,1.4966,0.17789,8.4132,{"v":3.99e-17,"d":"3.99E-17"},3.13E-15,"full_name=GLUCOSINOLATE TRANSPORTER-1. Major facilitator superfamily protein. Encodes a high-affinity, proton-dependent glucosinolate-specific transporter that is crucial for the transport of both methionine- and tryptophan-derived glucosinolates to seeds."]
["AT3G12670","emb2742",4647.4,-1.0021,0.094247,-10.633,{"v":2.1e-26,"d":"2.10E-26"},1.68E-24,"full_name=embryo defective 2742. CTP synthase family protein.","AT2G06950",null,2546.4,-1.4407,0.13523,-10.653,{"v":1.68e-26,"d":"1.68E-26"},1.35E-24,"transposable_element_gene.","AT2G43710","SSI2",791.25,1.36,0.16171,8.4105,{"v":4.08e-17,"d":"4.08E-17"},{"v":3.19e-15,"d":"3.19E-15"},"full_name=suppressor of SA insensitive 2. Plant stearoyl-acyl-carrier-protein desaturase family protein. Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates."]
["AT5G17310","UGP2",1694.7,-1.4778,0.13908,-10.625,{"v":2.27e-26,"d":"2.27E-26"},1.81E-24,"full_name=UDP-glucose pyrophosphorylase 2. UDP-glucose pyrophosphorylase 2.","AT4G24220","VEP1",3040.4,-1.2262,0.11538,-10.627,2.22E-26,{"v":1.77e-24,"d":"1.77E-24"},"full_name=VEIN PATTERNING 1. NAD(P)-binding Rossmann-fold superfamily protein. encodes a progesterone-5beta-reductase-like protein. It has enone reductase activity against a wide range of substrates, including 3-oxo-&#916;-4,5-steroids in vitro. The in vivo substrates and product of this enzyme have not yet been elucidated but it is likely to participate in steroid metabolism. The protein contains a mammalian death domain involved in programmed cell death. The gene is expressed in the vascular system and mutants carrying a dominant mutation in the gene have defective vascular patterning. VEP1 gene expression is induced specifically by wounding.","AT3G22270","PAT1H1",456.52,1.5589,0.18536,8.4102,{"v":4.09e-17,"d":"4.09E-17"},{"v":3.19e-15,"d":"3.19E-15"},"Topoisomerase II-associated protein PAT1."]
["AT3G15950","NAI2",6871.1,1.3288,0.12509,10.622,{"v":2.35e-26,"d":"2.35E-26"},{"v":1.86e-24,"d":"1.86E-24"},"DNA topoisomerase-like protein. Similar to TSK-associating protein 1 (TSA1), contains 10 EFE repeats, a novel repeat sequence unique to plants. Expressed preferentially in the roots.Protein is localized to ER bodies- an endoplasmic reticulum derived structure. Loss of function mutations lack ER bodies.","AT1G06680","PSBP-1",3513.8,1.4629,0.13767,10.626,{"v":2.26e-26,"d":"2.26E-26"},{"v":1.79e-24,"d":"1.79E-24"},"full_name=photosystem II subunit P-1. photosystem II subunit P-1. Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution. Phosphorylation of this protein is dependent on calcium. In plsp1-1 mutant plastids, the nonmature form of the protein localizes in the stroma.","AT4G04770","ABCI8",775.97,1.3306,0.15845,8.3975,{"v":4.56e-17,"d":"4.56E-17"},{"v":3.54e-15,"d":"3.54E-15"},"full_name=ATP-binding cassette I8. ATP binding cassette protein 1. Encodes an iron-stimulated ATPase. A member of the NAP subfamily of ABC transporters. Involved in Fe-S cluster assembly. Similar to SufB. Involved in the regulation of iron homeostasis. Able to form homodimers. Interacts with AtNAP7 inside the chloroplast."]
["AT1G15910","FDM1",809.12,-1.7356,0.16386,-10.592,3.25E-26,{"v":2.57e-24,"d":"2.57E-24"},"full_name=factor of DNA methylation 1. XH/XS domain-containing protein. Belongs to a subgroup of SGS3-like proteins that act redundantly in RNA-directed DNA methylation: AT1G15910 (FDM1), AT4G00380 (FDM2), AT3G12550 (FDM3), AT1G13790 (FDM4), AT1G80790 (FDM5).","AT1G58360","AAP1",2700.7,-1.128,0.10621,-10.62,{"v":2.4e-26,"d":"2.40E-26"},{"v":1.89e-24,"d":"1.89E-24"},"full_name=amino acid permease 1. amino acid permease 1. Encodes AAP1 (amino acid permease 1), a neutral amino acid transporter expressed in seeds. Functions in amino acid uptake into embryos. The transporter also functions in acquisition of glutamate and neutral amino acids by the root.","AT4G12870",null,233.25,-2.8242,0.33698,-8.3808,{"v":5.26e-17,"d":"5.26E-17"},{"v":4.06e-15,"d":"4.06E-15"},"Gamma interferon responsive lysosomal thiol (GILT) reductase family protein."]
["AT5G23940","PEL3",479.07,-2.528,0.23876,-10.588,{"v":3.39e-26,"d":"3.39E-26"},{"v":2.67e-24,"d":"2.67E-24"},"full_name=PERMEABLE LEAVES3. HXXXD-type acyl-transferase family protein. Encodes PERMEABLE LEAVES3 (PEL3), a putative acyl-transferase. Mutation in this locus results in altered trichome phenotype (trcichomes become tangled during leaf expansion). Additional phenotype includes altered cuticle layer.","AT5G04140","GLU1",220.03,2.8653,0.27,10.612,{"v":2.61e-26,"d":"2.61E-26"},{"v":2.05e-24,"d":"2.05E-24"},"full_name=glutamate synthase 1. glutamate synthase 1. Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation.","AT1G56600","GolS2",170.09,3.3602,0.40112,8.3771,{"v":5.43e-17,"d":"5.43E-17"},{"v":4.17e-15,"d":"4.17E-15"},"full_name=galactinol synthase 2. galactinol synthase 2. GolS2 is a galactinol synthase that catalyzes the formation of galactinol from UDP-galactose and myo-inositol. GolS2 transcript levels rise in response to methyl viologen, an oxidative damage-inducing agent. Plants over-expressing GolS2 have increased tolerance to salt, chilling, and high-light stress."]
["AT5G50260","CEP1",738.53,-1.7142,0.16292,-10.522,{"v":6.85e-26,"d":"6.85E-26"},{"v":5.37e-24,"d":"5.37E-24"},"full_name=cysteine endopeptidase 1. Cysteine proteinases superfamily protein. Encodes a papain-like cysteine protease involved in tapetal programmed cell death and pollen development.","AT4G35160","ASMT",778.15,-1.4785,0.13984,-10.572,{"v":4e-26,"d":"4.00E-26"},3.13E-24,"O-methyltransferase family protein.","AT2G04240","XERICO",424.19,1.7715,0.21156,8.3737,{"v":5.58e-17,"d":"5.58E-17"},{"v":4.28e-15,"d":"4.28E-15"},"RING/U-box superfamily protein. Encodes a small protein with an N-terminal trans-membrane domain and a RING-H2 zinc finger motif located at the C-terminus. Gene expression is induced by salt and osmotic stress. Transcrips levels are induced by DELLA proteins and repressed by gibberellic acid. Involved in ABA metabolism."]
["AT1G12230","GSM2-LIKE",723.13,-1.484,0.1412,-10.509,{"v":7.84e-26,"d":"7.84E-26"},{"v":6.12e-24,"d":"6.12E-24"},"Aldolase superfamily protein.","AT1G31330","PSAF",1806.3,1.4847,0.14095,10.533,{"v":6.06e-26,"d":"6.06E-26"},{"v":4.72e-24,"d":"4.72E-24"},"full_name=photosystem I subunit F. photosystem I subunit F. Encodes subunit F of photosystem I.","AT1G31750",null,148.33,2.4543,0.29422,8.3417,{"v":7.33e-17,"d":"7.33E-17"},{"v":5.57e-15,"d":"5.57E-15"},"proline-rich family protein."]
["AT1G21750","PDIL1-1",6384.4,-1.0681,0.10203,-10.469,{"v":1.2E-25,"d":"1.20E-25"},{"v":9.32e-24,"d":"9.32E-24"},"full_name=PDI-like 1-1. PDI-like 1-1. Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.","AT5G24950","CYP71A15",155.12,-5.3696,0.51135,-10.501,{"v":8.56e-26,"d":"8.56E-26"},{"v":6.64e-24,"d":"6.64E-24"},"full_name=cytochrome P450, family 71, subfamily A, polypeptide 15. cytochrome P450, family 71, subfamily A, polypeptide 15. putative cytochrome P450","AT1G06430","FTSH8",611.24,1.4195,0.17017,8.3416,{"v":7.33e-17,"d":"7.33E-17"},{"v":5.57e-15,"d":"5.57E-15"},"full_name=FTSH protease 8. FTSH protease 8. encodes a FtsH protease that is localized to the chloroplast"]
["AT3G46600",null,381.65,1.8877,0.18038,10.465,{"v":1.25e-25,"d":"1.25E-25"},{"v":9.66e-24,"d":"9.66E-24"},"GRAS family transcription factor.","AT2G42570","TBL39",428.51,1.9063,0.18155,10.5,{"v":8.62e-26,"d":"8.62E-26"},{"v":6.66e-24,"d":"6.66E-24"},"full_name=TRICHOME BIREFRINGENCE-LIKE 39. TRICHOME BIREFRINGENCE-LIKE 39. Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT5G03670","TRM28",140.86,-2.5578,0.30696,-8.3326,{"v":7.91e-17,"d":"7.91E-17"},{"v":5.98e-15,"d":"5.98E-15"},"full_name=TON1 Recruiting Motif 28. histone-lysine N-methyltransferase SETD1B-like protein."]
["AT4G30290","XTH19",196.07,2.7077,0.25874,10.465,{"v":1.25e-25,"d":"1.25E-25"},{"v":9.66e-24,"d":"9.66E-24"},"full_name=xyloglucan endotransglucosylase/hydrolase 19. xyloglucan endotransglucosylase/hydrolase 19. Encodes a xyloglucan endotransglucosylase/hydrolase with only only the endotransglucosylase (XET; EC 2.4.1.207) activity towards xyloglucan and non-detectable endohydrolytic (XEH; EC 3.2.1.151) activity. Expressed throughout both the main and the lateral root, with intensive expression at the dividing and elongating regions. Is expressed in lateral root primordia but expression ceases after lateral root begins to grow. Involved in cell proliferation in incised inflorescence stems.","AT5G26000","TGG1",1623.2,-1.2923,0.12316,-10.493,{"v":9.3e-26,"d":"9.30E-26"},7.15E-24,"full_name=thioglucoside glucohydrolase 1. thioglucoside glucohydrolase 1. member of Glycoside Hydrolase Family 1. encodes one of two known functional myrosinase enzymes in Arabidopsis. The enzyme catalyzes the hydrolysis of glucosinolates into compounds that are toxic to various microbes and herbivores.","AT4G31700","RPS6",3659.5,-1.1068,0.13288,-8.329,{"v":8.15e-17,"d":"8.15E-17"},{"v":6.15e-15,"d":"6.15E-15"},"full_name=ribosomal protein S6. ribosomal protein S6. Encodes a putative ribosomal protein S6 (rps6a). RPS6A and RPS6B are fully redundant and essential during gametogenesis."]
["AT4G22755",null,242.19,-2.5206,0.2409,-10.463,1.28E-25,{"v":9.81e-24,"d":"9.81E-24"},"methylsterol monooxygenase 1-3.","AT4G05180","PSBQ-2",864.18,1.9723,0.18839,10.469,{"v":1.19e-25,"d":"1.19E-25"},{"v":9.14e-24,"d":"9.14E-24"},"full_name=photosystem II subunit Q-2. photosystem II subunit Q-2. Encodes the PsbQ subunit of the oxygen evolving complex of photosystem II.","AT3G13330","PA200",989.61,1.1939,0.1434,8.3258,{"v":8.38e-17,"d":"8.38E-17"},{"v":6.29e-15,"d":"6.29E-15"},"full_name=proteasome activating protein 200. proteasome activating protein 200. Encodes a protein that interacts with the 26S proteasome. Mutants are phenotypically indistinguishable from wild type plants under a variety of growth conditions. Protein levels increase upon exposure of seedlings to MG132, a specific, potent, reversible, and cell-permeable proteasome inhibitor."]
["AT3G13470","Cpn60beta2",1756.4,1.2537,0.11985,10.461,1.31E-25,{"v":1e-23,"d":"1.00E-23"},"full_name=chaperonin-60beta2. TCP-1/cpn60 chaperonin family protein. Encodes a subunit of chloroplasts chaperonins that are involved in mediating the folding of newly synthesized, translocated, or stress-denatured proteins. Cpn60 subunits are: Cpn60alpha1 (At2g28000), AtCpn60alpha2 (At5g18820), AtCpn60beta1 (At1g55490), AtCpn60beta2 (At3g13470), AtCpn60beta3 (At5g56500), AtCpn60beta4 (At1g26230).","AT3G12203","scpl17",299.52,-3.7649,0.36041,-10.446,1.53E-25,1.17E-23,"full_name=serine carboxypeptidase-like 17. serine carboxypeptidase-like 17.","AT5G04140","GLU1",618.8,1.7108,0.20574,8.3155,9.13E-17,{"v":6.83e-15,"d":"6.83E-15"},"full_name=glutamate synthase 1. glutamate synthase 1. Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation."]
["AT4G37390","BRU6",904.56,-1.7683,0.16907,-10.459,{"v":1.33e-25,"d":"1.33E-25"},1.01E-23,"Auxin-responsive GH3 family protein. Encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin. May function as a negative component in auxin signaling by regulating auxin activity.","AT1G77950","AGL67",1106.3,-2.0308,0.19465,-10.433,{"v":1.75e-25,"d":"1.75E-25"},{"v":1.33e-23,"d":"1.33E-23"},"full_name=AGAMOUS-like 67. AGAMOUS-like 67.","AT5G26010",null,168.5,2.6446,0.31843,8.3049,{"v":9.99e-17,"d":"9.99E-17"},{"v":7.42e-15,"d":"7.42E-15"},"Protein phosphatase 2C family protein."]
["AT3G21090","ABCG15",1332.9,-1.3652,0.13054,-10.458,{"v":1.35e-25,"d":"1.35E-25"},{"v":1.03e-23,"d":"1.03E-23"},"full_name=ATP-binding cassette G15. ABC-2 type transporter family protein.","AT4G01480","PPa5",185.38,2.5876,0.24809,10.43,{"v":1.81e-25,"d":"1.81E-25"},1.37E-23,"full_name=pyrophosphorylase 5. pyrophosphorylase 5. Encodes a protein that might have inorganic pyrophosphatase activity.","AT5G06370","PSE1",1161.6,1.448,0.17436,8.3048,{"v":1e-16,"d":"1.00E-16"},{"v":7.42e-15,"d":"7.42E-15"},"NC domain-containing protein-like protein."]
["AT5G38480","GRF3",2010.3,1.0446,0.099917,10.454,{"v":1.4e-25,"d":"1.40E-25"},{"v":1.06e-23,"d":"1.06E-23"},"full_name=general regulatory factor 3. general regulatory factor 3. general regulatory factor, a 14-3-3 gene","AT2G36770",null,225.36,-2.9407,0.28206,-10.426,{"v":1.89e-25,"d":"1.89E-25"},1.43E-23,"UDP-Glycosyltransferase superfamily protein.","AT4G33240","FAB1A",674.24,1.4009,0.16871,8.3039,1.01E-16,{"v":7.44e-15,"d":"7.44E-15"},"full_name=FORMS APLOID AND BINUCLEATE CELLS 1A. 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. FAB1A and FAB1B complement the enlarged vacuolar phenotype of the fission yeast ste12delta mutant."]
["AT5G62350",null,1002.1,1.687,0.16158,10.44,1.62E-25,{"v":1.22e-23,"d":"1.22E-23"},"Plant invertase/pectin methylesterase inhibitor superfamily protein.","AT5G47220","ERF2",189.71,-3.1265,0.30068,-10.398,{"v":2.53e-25,"d":"2.53E-25"},{"v":1.9e-23,"d":"1.90E-23"},"full_name=ethylene responsive element binding factor 2. ethylene responsive element binding factor 2. Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box%E2%80%93dependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.","AT3G62260",null,98.877,3.4361,0.41407,8.2983,1.06E-16,{"v":7.77e-15,"d":"7.77E-15"},"Protein phosphatase 2C family protein."]
["AT5G38410","RBCS3B",2954.6,1.42,0.13612,10.432,1.77E-25,{"v":1.33e-23,"d":"1.33E-23"},"full_name=Rubisco small subunit 3B. Ribulose bisphosphate carboxylase (small chain) family protein. Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410). Functions to yield sufficient Rubisco content for leaf photosynthetic capacity.","AT5G55750",null,137.38,-3.9555,0.38051,-10.395,{"v":2.6E-25,"d":"2.60E-25"},1.95E-23,"hydroxyproline-rich glycoprotein family protein.","AT1G06570","PDS1",419.92,1.7722,0.21439,8.2665,1.38E-16,{"v":1.01e-14,"d":"1.01E-14"},"full_name=phytoene desaturation 1. 4-hydroxyphenylpyruvate dioxygenase. Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants."]
["AT5G07990","TT7",1173.3,1.6566,0.15892,10.424,{"v":1.92e-25,"d":"1.92E-25"},1.44E-23,"full_name=TRANSPARENT TESTA 7. Cytochrome P450 superfamily protein. Required for flavonoid 3' hydroxylase activity. Enzyme abundance relative to CHS determines Quercetin/Kaempferol metabolite ratio.","AT5G56795","MT1B",1098.1,-2.6979,0.2598,-10.385,2.92E-25,{"v":2.17e-23,"d":"2.17E-23"},"full_name=metallothionein 1B. metallothionein 1B. one of the five metallothioneins (MTs) genes identified in Arabidopsis. MTs are cysteine-rich proteins required for heavy metal tolerance. The MT1b gene, however, is indicated to be inactive.","AT3G14067","SASP",2959.5,1.58,0.19116,8.2652,{"v":1.39e-16,"d":"1.39E-16"},1.02E-14,"Subtilase family protein. Encodes a protein with similarity to serine protease, subtilisin, that is upregulated during senescence and expressed in the arial portions of the plant.Loss of function mutations have increased branch number but normal silique length and seed set and therefore have increased fertility."]
["AT3G44720","ADT4",544.45,-1.53,0.14712,-10.4,{"v":2.49e-25,"d":"2.49E-25"},{"v":1.85e-23,"d":"1.85E-23"},"full_name=arogenate dehydratase 4. arogenate dehydratase 4. Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identi&#64257;ed in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].","AT5G13870","XTH5",765.93,2.2997,0.22237,10.342,{"v":4.56e-25,"d":"4.56E-25"},3.38E-23,"full_name=xyloglucan endotransglucosylase/hydrolase 5. xyloglucan endotransglucosylase/hydrolase 5. EXGT-A4, endoxyloglucan transferase,","AT3G16430","JAL31",522.57,-1.4317,0.17344,-8.2543,1.53E-16,1.11E-14,"full_name=jacalin-related lectin 31. jacalin-related lectin 31. Encodes a protein that increases the beta-glucosidase activities of three scopolin glucosidases in vitro."]
["AT5G22740","CSLA02",502.15,-1.6701,0.16063,-10.397,{"v":2.56e-25,"d":"2.56E-25"},{"v":1.9e-23,"d":"1.90E-23"},"full_name=cellulose synthase-like A02. cellulose synthase-like A02. encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein","AT1G73620",null,128.2,3.3104,0.32047,10.33,{"v":5.17e-25,"d":"5.17E-25"},{"v":3.82e-23,"d":"3.82E-23"},"Pathogenesis-related thaumatin superfamily protein.","AT4G03200",null,462.45,1.5721,0.19061,8.2475,{"v":1.62e-16,"d":"1.62E-16"},1.17E-14,"catalytics."]
["AT1G44800","SIAR1",928.82,-1.3728,0.13205,-10.397,{"v":2.57e-25,"d":"2.57E-25"},{"v":1.9e-23,"d":"1.90E-23"},"full_name=Siliques Are Red 1. nodulin MtN21 /EamA-like transporter family protein. Encodes Siliques Are Red 1 (SIAR1). Functions as a bidirectional amino acid transporter that is crucial for the amino acid homeostasis of siliques. Member of nodulin MtN21-like transporter family.","AT5G47770","FPS1",299.58,2.018,0.19539,10.328,{"v":5.27e-25,"d":"5.27E-25"},{"v":3.88e-23,"d":"3.88E-23"},"full_name=farnesyl diphosphate synthase 1. farnesyl diphosphate synthase 1. Encodes a protein with farnesyl diphosphate synthase activity.","AT3G19920",null,176.19,2.7496,0.33341,8.2468,{"v":1.63e-16,"d":"1.63E-16"},1.17E-14,"BTB/POZ domain protein."]
["AT3G16190",null,2489.4,-1.3602,0.13087,-10.394,{"v":2.65e-25,"d":"2.65E-25"},1.95E-23,"Isochorismatase family protein.","AT3G23790","AAE16",945.63,1.3572,0.13157,10.315,{"v":6.02e-25,"d":"6.02E-25"},{"v":4.41e-23,"d":"4.41E-23"},"full_name=acyl activating enzyme 16. AMP-dependent synthetase and ligase family protein.","AT2G41280","M10",455.78,1.7106,0.20745,8.2457,1.64E-16,{"v":1.18e-14,"d":"1.18E-14"},"late embryogenesis abundant protein (M10) / LEA protein M10. Encodes a hydrophilic protein similar to Late Embryogenesis Activated (LEA) proteins expressed during embryogenesis, which are thought to be involved in the acquisition of dessication tolerance."]
["AT5G14180","MPL1",835.39,1.3616,0.13103,10.392,{"v":2.71e-25,"d":"2.71E-25"},{"v":1.98e-23,"d":"1.98E-23"},"full_name=Myzus persicae-induced lipase 1. Myzus persicae-induced lipase 1.","AT1G47395","FEP2",532.94,-1.8429,0.17915,-10.287,{"v":8.04e-25,"d":"8.04E-25"},{"v":5.87e-23,"d":"5.87E-23"},"hypothetical protein.","AT3G29240",null,447.89,1.5563,0.18918,8.2268,{"v":1.92e-16,"d":"1.92E-16"},1.38E-14,"PPR containing protein (DUF179)."]
["AT3G16430","JAL31",148.56,3.6309,0.34948,10.389,2.77E-25,2.02E-23,"full_name=jacalin-related lectin 31. jacalin-related lectin 31. Encodes a protein that increases the beta-glucosidase activities of three scopolin glucosidases in vitro.","AT2G06850","XTH4",475.53,2.1666,0.21066,10.285,{"v":8.24e-25,"d":"8.24E-25"},{"v":6e-23,"d":"6.00E-23"},"full_name=xyloglucan endotransglucosylase/hydrolase 4. xyloglucan endotransglucosylase/hydrolase 4. endoxyloglucan transferase (EXGT-A1) gene","AT4G24690","NBR1",2664.2,1.0002,0.12162,8.2243,1.96E-16,{"v":1.4E-14,"d":"1.40E-14"},"full_name=next to BRCA1 gene 1. ubiquitin-associated (UBA)/TS-N domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein. Encodes NBR1, a selective autophagy substrate."]
["AT5G03795",null,644.81,-2.234,0.21546,-10.369,{"v":3.45e-25,"d":"3.45E-25"},{"v":2.51e-23,"d":"2.51E-23"},"Exostosin family protein.","AT1G52230","PSAH2",1249,1.6424,0.15979,10.279,{"v":8.76e-25,"d":"8.76E-25"},{"v":6.35e-23,"d":"6.35E-23"},"full_name=photosystem I subunit H2. photosystem I subunit H2. Phosphorylation of this protein is dependent on calcium.","AT1G67310",null,458.98,1.4976,0.18234,8.2133,{"v":2.15e-16,"d":"2.15E-16"},{"v":1.53e-14,"d":"1.53E-14"},"Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain."]
["AT1G74030","ENO1",563.11,-1.654,0.15965,-10.36,{"v":3.76e-25,"d":"3.76E-25"},{"v":2.72e-23,"d":"2.72E-23"},"full_name=enolase 1. enolase 1. Encodes the plastid-localized phosphoenolpyruvate enolase. Mutant plants have abnormal trichomes.","AT2G36950","ATHMP20",390.46,-1.9165,0.18661,-10.27,{"v":9.61e-25,"d":"9.61E-25"},{"v":6.94e-23,"d":"6.94E-23"},"Heavy metal transport/detoxification superfamily protein.","AT1G03610",null,724.65,1.5721,0.19156,8.2068,{"v":2.27e-16,"d":"2.27E-16"},{"v":1.61e-14,"d":"1.61E-14"},"plant/protein (DUF789)."]
["AT5G49280",null,309.7,-2.6434,0.25544,-10.348,{"v":4.25e-25,"d":"4.25E-25"},{"v":3.07e-23,"d":"3.07E-23"},"hydroxyproline-rich glycoprotein family protein.","AT3G58060","MTP8",1046.9,-1.3757,0.13433,-10.241,{"v":1.3E-24,"d":"1.30E-24"},{"v":9.32e-23,"d":"9.32E-23"},"Cation efflux family protein.","AT5G63350","AITR6",992.47,1.2356,0.15075,8.1962,{"v":2.48e-16,"d":"2.48E-16"},{"v":1.75e-14,"d":"1.75E-14"},"von willebrand factor A domain protein."]
["AT4G01610","ATCATHB3",14352,1.3972,0.13518,10.336,4.86E-25,{"v":3.49e-23,"d":"3.49E-23"},"Cysteine proteinases superfamily protein.","AT3G48270","CYP71A26",405.04,-2.4451,0.23895,-10.233,1.42E-24,1.01E-22,"full_name=cytochrome P450, family 71, subfamily A, polypeptide 26. cytochrome P450, family 71, subfamily A, polypeptide 26. putative cytochrome P450","AT5G51550","EXL3",195.27,-2.2958,0.28141,-8.1582,{"v":3.4E-16,"d":"3.40E-16"},{"v":2.39e-14,"d":"2.39E-14"},"full_name=EXORDIUM like 3. EXORDIUM like 3."]
["AT5G56010","HSP81-3",3894.3,0.99336,0.096156,10.331,{"v":5.12e-25,"d":"5.12E-25"},{"v":3.67e-23,"d":"3.67E-23"},"full_name=heat shock protein 81-3. heat shock protein 81-3. A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Overexpression reduced tolerance to heat and conferred higher tolerance to calcium.","AT1G17020","SRG1",154.26,-3.6247,0.35441,-10.227,{"v":1.5E-24,"d":"1.50E-24"},1.07E-22,"full_name=senescence-related gene 1. senescence-related gene 1. Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.","AT1G09070","SRC2",372.14,1.7053,0.20936,8.1453,{"v":3.78e-16,"d":"3.78E-16"},{"v":2.65e-14,"d":"2.65E-14"},"full_name=soybean gene regulated by cold-2. soybean gene regulated by cold-2. SRC2 specifically binds the peptide PIEPPPHH, and moves from ER to a vacuole fraction where it gets internalized. Involved in Protein Storage Vacuole targeting."]
["AT4G14270",null,2417.9,1.0791,0.10469,10.308,{"v":6.51e-25,"d":"6.51E-25"},{"v":4.64e-23,"d":"4.64E-23"},"polyadenylate-binding protein interacting protein. Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins.","AT3G09770","LOG2",708.78,-1.4461,0.14162,-10.211,{"v":1.77e-24,"d":"1.77E-24"},1.26E-22,"full_name=LOSS OF GDU 2. RING/U-box superfamily protein. Encodes a ubiquitin E3 ligase LOG2 (LOSS OF GDU2). Required for GLUTAMINE DUMPER1(GDU1)-induced amino secretion.","AT4G38680","GRP2",1051,-1.1468,0.14098,-8.135,{"v":4.12e-16,"d":"4.12E-16"},2.87E-14,"full_name=glycine rich protein 2. glycine rich protein 2. Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development."]
["AT3G10985","SAG20",457.23,-1.9204,0.18652,-10.296,{"v":7.37e-25,"d":"7.37E-25"},{"v":5.24e-23,"d":"5.24E-23"},"full_name=senescence associated gene 20. senescence associated gene 20. A senescence-associated gene whose expression is induced in response to treatment with Nep1, a fungal protein that causes necrosis.","AT3G18490","ASPG1",3039.6,-1.0143,0.099488,-10.195,2.09E-24,{"v":1.48e-22,"d":"1.48E-22"},"full_name=ASPARTIC PROTEASE IN GUARD CELL 1. Eukaryotic aspartyl protease family protein. Encodes ASPG1 (ASPARTIC PROTEASE IN GUARD CELL 1). Functions in drought avoidance through abscisic acid (ABA) signalling in guard cells.","AT1G30500","NF-YA7",290.39,1.8724,0.23029,8.1307,{"v":4.27e-16,"d":"4.27E-16"},{"v":2.96e-14,"d":"2.96E-14"},"full_name=nuclear factor Y, subunit A7. nuclear factor Y, subunit A7."]
["AT4G36850",null,1304.1,-1.3223,0.12848,-10.292,{"v":7.66e-25,"d":"7.66E-25"},{"v":5.43e-23,"d":"5.43E-23"},"PQ-loop repeat family protein / transmembrane family protein.","AT1G69040","ACR4",776.52,1.4536,0.14286,10.175,{"v":2.57e-24,"d":"2.57E-24"},{"v":1.81e-22,"d":"1.81E-22"},"full_name=ACT domain repeat 4. ACT domain repeat 4. ACT-domain containing protein involved in feedback regulation of amino acid metabolism","AT1G04920","SPS3F",213.11,2.3014,0.28329,8.1239,{"v":4.51e-16,"d":"4.51E-16"},{"v":3.12e-14,"d":"3.12E-14"},"full_name=sucrose phosphate synthase 3F. sucrose phosphate synthase 3F. Encodes a protein with putative sucrose-phosphate synthase activity."]
["AT2G44080","ARL",943.67,1.227,0.11942,10.274,{"v":9.23e-25,"d":"9.23E-25"},{"v":6.52e-23,"d":"6.52E-23"},"full_name=ARGOS-like. ARGOS-like protein. Encodes ARL, a gene similar to ARGOS involved in cell expansion-dependent organ growth. Upregulated by brassinosteroid. Acts downstream of BRI1.","AT4G10020","HSD5",639.54,-1.7491,0.17203,-10.167,{"v":2.77e-24,"d":"2.77E-24"},1.95E-22,"full_name=hydroxysteroid dehydrogenase 5. hydroxysteroid dehydrogenase 5. Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.","AT1G29050","TBL38",159.66,2.5739,0.31701,8.1194,{"v":4.68e-16,"d":"4.68E-16"},{"v":3.22e-14,"d":"3.22E-14"},"full_name=TRICHOME BIREFRINGENCE-LIKE 38. TRICHOME BIREFRINGENCE-LIKE 38. Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication)."]
["AT3G51430","YLS2",2717,-1.3332,0.12978,-10.273,{"v":9.34e-25,"d":"9.34E-25"},{"v":6.57e-23,"d":"6.57E-23"},"full_name=YELLOW-LEAF-SPECIFIC GENE 2. Calcium-dependent phosphotriesterase superfamily protein. Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.","AT2G22470","AGP2",190.43,-3.1117,0.30611,-10.165,{"v":2.83e-24,"d":"2.83E-24"},1.98E-22,"full_name=arabinogalactan protein 2. arabinogalactan protein 2. Encodes arabinogalactan-protein (AGP2).","AT3G14590","NTMC2T6.2",232.93,2.1368,0.26318,8.1194,{"v":4.69e-16,"d":"4.69E-16"},{"v":3.22e-14,"d":"3.22E-14"},"Calcium-dependent lipid-binding (CaLB domain) family protein."]
["AT5G27360","SFP2",476.44,-2.4194,0.23573,-10.264,1.03E-24,{"v":7.2e-23,"d":"7.20E-23"},"Major facilitator superfamily protein. Encodes a sugar-porter family protein that unlike the closely related gene, SFP1, is not induced during leaf senescence.","AT1G70710","GH9B1",114.7,3.3529,0.32999,10.161,2.97E-24,2.08E-22,"full_name=glycosyl hydrolase 9B1. glycosyl hydrolase 9B1. endo-1,4-beta-glucanase. Involved in cell elongation.","AT4G21710","NRPB2",1438.3,1.124,0.13866,8.1059,{"v":5.24e-16,"d":"5.24E-16"},{"v":3.58e-14,"d":"3.58E-14"},"DNA-directed RNA polymerase family protein. Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit."]
["AT5G05880","UGT76C4",545.46,1.7284,0.16847,10.26,{"v":1.07e-24,"d":"1.07E-24"},{"v":7.47e-23,"d":"7.47E-23"},"UDP-Glycosyltransferase superfamily protein.","AT2G30600",null,731.28,-1.4918,0.14691,-10.154,{"v":3.17e-24,"d":"3.17E-24"},{"v":2.2e-22,"d":"2.20E-22"},"BTB/POZ domain-containing protein.","AT5G10300","MES5",385.04,1.9175,0.2367,8.1009,5.46E-16,{"v":3.72e-14,"d":"3.72E-14"},"full_name=methyl esterase 5. methyl esterase 5. Encodes a protein with R-selective hydroxynitrile lyase activity. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro."]
["AT5G27120",null,2546,1.029,0.10051,10.238,{"v":1.34e-24,"d":"1.34E-24"},{"v":9.32e-23,"d":"9.32E-23"},"NOP56-like pre RNA processing ribonucleoprotein. SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; has similarity to MAR binding NOP58 protein","AT4G14420",null,466.5,1.6628,0.16388,10.147,{"v":3.43e-24,"d":"3.43E-24"},{"v":2.38e-22,"d":"2.38E-22"},"HR-like lesion-inducing protein-like protein.","AT3G05640","EGR1",521.25,2.2846,0.28211,8.0983,{"v":5.57e-16,"d":"5.57E-16"},3.78E-14,"Protein phosphatase 2C family protein."]
["AT1G17060","CYP72C1",259.09,-2.565,0.25063,-10.234,{"v":1.4e-24,"d":"1.40E-24"},{"v":9.67e-23,"d":"9.67E-23"},"full_name=cytochrome p450 72c1. cytochrome p450 72c1. Encodes a protein with similarity to other cytochrome P450's and is a homolog of BAS1. Over expression causes a dwarf phenotype resembling brassinolide resistant mutants. Double mutant analysis of sob7/bas1 loss of function mutants suggests these genes have redundant functions in light responsiveness. SOB7 may function in metabolizing brassinolides. Expressed in leaf, root, stem and silique but expression highest in flower and cauline leaves. Dominant overexpressing plants have dwarf phenotype, short siliques/seeds, rounded dark green leaves and short hypocotyls in light and dark. Loss of function alleles result in plants with long hypocotyls.","AT3G61490",null,234.5,2.5367,0.25027,10.136,{"v":3.83e-24,"d":"3.83E-24"},{"v":2.65e-22,"d":"2.65E-22"},"Pectin lyase-like superfamily protein.","AT3G56360",null,602.94,-1.4448,0.17845,-8.096,{"v":5.68e-16,"d":"5.68E-16"},{"v":3.84e-14,"d":"3.84E-14"},"hypothetical protein."]
["AT5G23750",null,452.67,-2.223,0.21806,-10.194,{"v":2.11e-24,"d":"2.11E-24"},{"v":1.45e-22,"d":"1.45E-22"},"Remorin family protein.","AT4G09010","TL29",823.52,1.4938,0.14747,10.129,{"v":4.1e-24,"d":"4.10E-24"},{"v":2.81e-22,"d":"2.81E-22"},"full_name=thylakoid lumen 29. ascorbate peroxidase 4. Encodes a thylakoid lumen protein that was initially believed to act as a microsomal ascorbate peroxidase APX4 but to date, no evidence of enzymatic activity has been found.","AT4G12400","Hop3",166.78,2.7126,0.33542,8.0871,{"v":6.11e-16,"d":"6.11E-16"},{"v":4.12e-14,"d":"4.12E-14"},"full_name=Hop3. stress-inducible protein. Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones."]
["AT5G13730","SIG4",194.85,2.9995,0.29446,10.186,{"v":2.28e-24,"d":"2.28E-24"},{"v":1.57e-22,"d":"1.57E-22"},"full_name=sigma factor 4. sigma factor 4. Encodes sigma 4 factor, involved in regulating the activity of the plastid-encoded RNA polymerase PEP. Regulates the overall quantity of NDH complexes and thus influences NDH activity.","AT4G17840","BCM4",347.28,-2.0412,0.20152,-10.129,{"v":4.11e-24,"d":"4.11E-24"},{"v":2.81e-22,"d":"2.81E-22"},"CAAX protease self-immunity protein.","AT3G54820","PIP2;5",382.12,1.8197,0.22508,8.0848,{"v":6.23e-16,"d":"6.23E-16"},{"v":4.18e-14,"d":"4.18E-14"},"full_name=plasma membrane intrinsic protein 2;5. plasma membrane intrinsic protein 2;5."]
["AT3G25780","AOC3",217.15,2.4272,0.23841,10.181,{"v":2.42e-24,"d":"2.42E-24"},1.66E-22,"full_name=allene oxide cyclase 3. allene oxide cyclase 3. Encodes allene oxide cyclase, one of the enzymes involved in jasmonic acid biosynthesis. One of four genes in Arabidopsis that encode this enzyme. mRNA expression is upregulated in senescing leaves. Note: Nomenclature for Arabidopsis allene oxide cyclase 3 (AOC3, AT3G25780) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC3 (AT3G25780) is also referred to as AOC2 in He et al. 2002 Plant Physiology, 128:876-884.","AT3G07990","SCPL27",134.83,3.1128,0.3076,10.12,{"v":4.52e-24,"d":"4.52E-24"},{"v":3.08e-22,"d":"3.08E-22"},"full_name=serine carboxypeptidase-like 27. serine carboxypeptidase-like 27.","AT2G41210","PIP5K5",268.23,1.849,0.22946,8.0582,{"v":7.74e-16,"d":"7.74E-16"},{"v":5.18e-14,"d":"5.18E-14"},"full_name=phosphatidylinositol- 4-phosphate 5-kinase 5. phosphatidylinositol- 4-phosphate 5-kinase 5. Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology."]
["AT3G54940",null,473.49,-2.7938,0.2748,-10.167,{"v":2.79e-24,"d":"2.79E-24"},{"v":1.9e-22,"d":"1.90E-22"},"Papain family cysteine protease.","AT5G02350",null,105.3,4.009,0.39654,10.11,{"v":5e-24,"d":"5.00E-24"},{"v":3.4e-22,"d":"3.40E-22"},"Cysteine/Histidine-rich C1 domain family protein.","AT5G39660","CDF2",201.84,2.1492,0.26697,8.0503,{"v":8.26e-16,"d":"8.26E-16"},5.51E-14,"full_name=cycling DOF factor 2. cycling DOF factor 2. Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions."]
["AT5G62210",null,606.52,-1.8161,0.17896,-10.148,3.38E-24,{"v":2.3e-22,"d":"2.30E-22"},"Embryo-specific protein 3, (ATS3).","AT1G80160","GLYI7",188.56,-3.4709,0.34382,-10.095,{"v":5.81e-24,"d":"5.81E-24"},3.93E-22,"full_name=glyoxylase I 7. Lactoylglutathione lyase / glyoxalase I family protein.","AT3G24927",null,490.19,1.6531,0.20577,8.0337,{"v":9.46e-16,"d":"9.46E-16"},{"v":6.28e-14,"d":"6.28E-14"},"pseudogene. pseudogene of unknown protein"]
["AT4G15910","DI21",7223.9,0.81745,0.08058,10.145,{"v":3.5e-24,"d":"3.50E-24"},{"v":2.38e-22,"d":"2.38E-22"},"full_name=drought-induced 21. drought-induced 21. encodes a gene whose transcript level in root and leaves increases to progressive drought stress. The transcript level is also affected by changes of endogenous or exogenous abscisic acid level. It appears to be a member of plant-specific gene family that includes late embryo-abundant and zinc- IAA-induced proteins in other plants.","AT5G64190",null,148.38,-3.5521,0.35187,-10.095,{"v":5.82e-24,"d":"5.82E-24"},3.93E-22,"neuronal PAS domain protein.","AT4G39940","AKN2",208.01,-2.36,0.29383,-8.0319,{"v":9.6e-16,"d":"9.60E-16"},{"v":6.35e-14,"d":"6.35E-14"},"full_name=APS-kinase 2. APS-kinase 2. adenosine-5'-phosphosulfate-kinase (akn2) mRNA, complete"]
["AT3G17860","JAZ3",750.81,-1.3571,0.13379,-10.144,{"v":3.54e-24,"d":"3.54E-24"},{"v":2.39e-22,"d":"2.39E-22"},"full_name=jasmonate-zim-domain protein 3. jasmonate-zim-domain protein 3. JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine.","AT1G66180",null,830.72,-1.4344,0.14225,-10.084,{"v":6.53e-24,"d":"6.53E-24"},{"v":4.4e-22,"d":"4.40E-22"},"Eukaryotic aspartyl protease family protein. The gene encodes a putative aspartyl protease (ASP). Its expression is induced in response to light and ascorbate.","AT1G14200","SNIPER1",192.54,2.1598,0.26917,8.0238,1.03E-15,{"v":6.76e-14,"d":"6.76E-14"},"RING/U-box superfamily protein."]
["AT1G47960","C/VIF1",2069.2,-1.4164,0.13976,-10.135,3.88E-24,{"v":2.61e-22,"d":"2.61E-22"},"full_name=cell wall / vacuolar inhibitor of fructosidase 1. cell wall / vacuolar inhibitor of fructosidase 1. Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. This protein may inhibit their activity.","AT4G21960","PRXR1",26087,-1.4199,0.14129,-10.05,{"v":9.22e-24,"d":"9.22E-24"},{"v":6.18e-22,"d":"6.18E-22"},"Peroxidase superfamily protein. Encodes AT4g21960 (AT4g21960/T8O5_170).","AT1G51140","FBH3",1939.4,1.5696,0.19588,8.0132,{"v":1.12e-15,"d":"1.12E-15"},{"v":7.34e-14,"d":"7.34E-14"},"full_name=FLOWERING BHLH 3. basic helix-loop-helix (bHLH) DNA-binding superfamily protein. Encodes a basic helix?loop?helix-type transcription factor involved in photoperiodism flowering."]
["AT5G66780",null,2511.7,0.95241,0.094052,10.126,{"v":4.22e-24,"d":"4.22E-24"},2.83E-22,"late embryogenesis abundant protein.","AT2G39700","EXPA4",228.62,2.1774,0.21701,10.034,1.08E-23,{"v":7.24e-22,"d":"7.24E-22"},"full_name=expansin A4. expansin A4. putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","AT5G17850","CCX2",214.21,2.0836,0.26039,8.0019,{"v":1.23e-15,"d":"1.23E-15"},{"v":8.02e-14,"d":"8.02E-14"},"Sodium/calcium exchanger family protein."]
["AT2G01520","MLP328",125.01,-4.3019,0.42588,-10.101,{"v":5.45e-24,"d":"5.45E-24"},3.64E-22,"full_name=MLP-like protein 328. MLP-like protein 328. Encodes a cis-cinnamic acid responsive gene that is a member of the major latex protein-like gene family and plays a role in promoting vegetative growth and delaying &#64258;owering.","AT5G65550",null,147.25,-3.328,0.33198,-10.025,{"v":1.19e-23,"d":"1.19E-23"},7.92E-22,"UDP-Glycosyltransferase superfamily protein.","AT5G65310","HB5",927.93,-1.2165,0.15227,-7.9895,1.36E-15,{"v":8.84e-14,"d":"8.84E-14"},"full_name=homeobox protein 5. homeobox protein 5. Encodes a class I HDZip (homeodomain-leucine zipper) protein that is a positive regulator of ABA-responsiveness, mediating the inhibitory effect of ABA on growth during seedling establishment."]
["AT3G23990","HSP60",2801.6,0.93291,0.092364,10.1,{"v":5.5e-24,"d":"5.50E-24"},3.67E-22,"full_name=heat shock protein 60. heat shock protein 60. mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria.","AT5G45490",null,281.69,1.9785,0.19765,10.01,{"v":1.38e-23,"d":"1.38E-23"},{"v":9.15e-22,"d":"9.15E-22"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT1G21680",null,215.59,2.6743,0.33528,7.9763,{"v":1.51e-15,"d":"1.51E-15"},{"v":9.8e-14,"d":"9.80E-14"},"DPP6 N-terminal domain-like protein."]
["AT1G29910","CAB3",7925,-1.1123,0.11062,-10.055,{"v":8.76e-24,"d":"8.76E-24"},5.81E-22,"full_name=chlorophyll A/B binding protein 3. chlorophyll A/B binding protein 3. member of Chlorophyll a/b-binding protein family","AT2G36460","FBA6",3674.2,-0.99408,0.099335,-10.007,{"v":1.42e-23,"d":"1.42E-23"},{"v":9.36e-22,"d":"9.36E-22"},"full_name=fructose-bisphosphate aldolase 6. Aldolase superfamily protein.","AT5G17220","GSTF12",602.02,-1.5121,0.18974,-7.9691,{"v":1.6E-15,"d":"1.60E-15"},1.04E-13,"full_name=glutathione S-transferase phi 12. glutathione S-transferase phi 12. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). Mutants display no pigments on leaves and stems. Likely to function as a carrier to transport anthocyanin from the cytosol to tonoplasts."]
["AT2G27380","EPR1",253030,-1.1265,0.11219,-10.041,{"v":1e-23,"d":"1.00E-23"},{"v":6.64e-22,"d":"6.64E-22"},"full_name=extensin proline-rich 1. extensin proline-rich 1. Encodes an extensin like gene involved in seed germination.","AT2G25980",null,1088.1,1.2087,0.12102,9.9881,{"v":1.72e-23,"d":"1.72E-23"},1.13E-21,"Mannose-binding lectin superfamily protein.","AT4G19230","CYP707A1",841.23,1.9877,0.25005,7.9495,1.87E-15,{"v":1.21e-13,"d":"1.21E-13"},"full_name=cytochrome P450, family 707, subfamily A, polypeptide 1. cytochrome P450, family 707, subfamily A, polypeptide 1. Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy."]
["AT3G22960","PKP-ALPHA",3888.9,-0.96444,0.096129,-10.033,{"v":1.09e-23,"d":"1.09E-23"},{"v":7.21e-22,"d":"7.21E-22"},"Pyruvate kinase family protein. encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds.","AT3G23810","SAHH2",355.45,1.9438,0.1947,9.9838,{"v":1.8e-23,"d":"1.80E-23"},1.18E-21,"full_name=S-adenosyl-l-homocysteine (SAH) hydrolase 2. S-adenosyl-l-homocysteine (SAH) hydrolase 2.","AT5G44670","GALS2",224.41,1.8848,0.2372,7.946,{"v":1.93e-15,"d":"1.93E-15"},1.24E-13,"full_name=galactan synthase 2. glycosyltransferase family protein (DUF23)."]
["AT4G25960","ABCB2",794.17,-1.3146,0.13133,-10.011,1.37E-23,{"v":9e-22,"d":"9.00E-22"},"full_name=ATP-binding cassette B2. P-glycoprotein 2.","AT4G15160","PAC2",1039,1.2594,0.12662,9.9465,2.61E-23,{"v":1.71e-21,"d":"1.71E-21"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT5G13930","TT4",3143,1.4054,0.17695,7.9424,{"v":1.98e-15,"d":"1.98E-15"},{"v":1.27e-13,"d":"1.27E-13"},"full_name=TRANSPARENT TESTA 4. Chalcone and stilbene synthase family protein. Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism."]
["AT3G26740","CCL",4993.8,1.4633,0.14645,9.9921,{"v":1.65e-23,"d":"1.65E-23"},{"v":1.08e-21,"d":"1.08E-21"},"full_name=CCR-like. CCR-like protein. transcripts are differentially regulated at the level of mRNA stability at different times of day controlled by the circadian clock. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant.","AT1G60680",null,154.54,-3.6125,0.36497,-9.8981,{"v":4.24e-23,"d":"4.24E-23"},2.77E-21,"NAD(P)-linked oxidoreductase superfamily protein.","AT5G18450",null,78.796,4.0961,0.51613,7.9361,2.09E-15,{"v":1.33e-13,"d":"1.33E-13"},"Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought."]
["AT5G66100","LARP1b",599.3,-1.4947,0.1496,-9.9916,{"v":1.66e-23,"d":"1.66E-23"},{"v":1.08e-21,"d":"1.08E-21"},"full_name=La related protein 1b. winged-helix DNA-binding transcription factor family protein. Encodes a LAM domain containing protein that is involved in leaf senescence.","AT1G49240","ACT8",2136,1.2167,0.12293,9.8974,{"v":4.27e-23,"d":"4.27E-23"},{"v":2.78e-21,"d":"2.78E-21"},"full_name=actin 8. actin 8. Member of a subclass of actins composed of ACT2 and ACT8. Its mRNA is strongly expressed in strongly expressed in leaves, roots, stems, flowers, pollen, and siliques. However, protein expression, assayed by a ACT8:GUS fusion reporter, is very low in pollen.","AT4G22590","TPPG",111.27,3.2972,0.4165,7.9165,{"v":2.44e-15,"d":"2.44E-15"},{"v":1.56e-13,"d":"1.56E-13"},"full_name=trehalose-6-phosphate phosphatase G. Haloacid dehalogenase-like hydrolase (HAD) superfamily protein."]
["AT5G10400","H3.1",327.05,1.8599,0.18621,9.9883,{"v":1.71e-23,"d":"1.71E-23"},{"v":1.11e-21,"d":"1.11E-21"},"Histone superfamily protein.","AT4G04810","MSRB4",277.16,-2.2574,0.22814,-9.8947,{"v":4.39e-23,"d":"4.39E-23"},{"v":2.84e-21,"d":"2.84E-21"},"full_name=methionine sulfoxide reductase B4. methionine sulfoxide reductase B4.","AT3G55280","RPL23AB",1222.1,-1.1389,0.14393,-7.9129,{"v":2.51e-15,"d":"2.51E-15"},{"v":1.6E-13,"d":"1.60E-13"},"full_name=ribosomal protein L23AB. ribosomal protein L23AB. 60S ribosomal protein L23A (RPL23aB). Paralog of RPL23aA"]
["AT5G20950","BGLC1",940.23,1.3737,0.13761,9.9824,1.82E-23,1.18E-21,"Glycosyl hydrolase family protein.","AT3G03050","CSLD3",520.29,1.511,0.15301,9.8748,{"v":5.36e-23,"d":"5.36E-23"},{"v":3.46e-21,"d":"3.46E-21"},"full_name=cellulose synthase-like D3. cellulose synthase-like D3. encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide.","AT2G47800","ABCC4",692.52,1.3219,0.1673,7.9015,{"v":2.76e-15,"d":"2.76E-15"},{"v":1.74e-13,"d":"1.74E-13"},"full_name=ATP-binding cassette C4. multidrug resistance-associated protein 4. Encodes a plasma membrane localized ATPase transporter involved in multidrug transport. The expression of this gene is upregulated by herbicide safeners such as benoxacor, fluxofenim and fenclorim."]
["AT4G16190",null,547.57,-1.6132,0.16162,-9.9812,{"v":1.84e-23,"d":"1.84E-23"},{"v":1.19e-21,"d":"1.19E-21"},"Papain family cysteine protease.","AT2G33770","PHO2",2976.8,-1.0353,0.10491,-9.8688,{"v":5.68e-23,"d":"5.68E-23"},3.65E-21,"full_name=phosphate 2. phosphate 2. Encodes a ubiquitin-conjugating E2 enzyme. UBC24 mRNA accumulation is suppressed by miR399f, miR399b and miR399c. Involved in phosphate starvation response and mediates degradation of PHO1 and PHT1s at endomembrane. Its expression is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots.","AT5G18130",null,375.05,2.0363,0.25776,7.8997,2.79E-15,{"v":1.76e-13,"d":"1.76E-13"},"transmembrane protein."]
["AT4G13660","PRR2",301.51,2.0928,0.20976,9.977,{"v":1.92e-23,"d":"1.92E-23"},{"v":1.24e-21,"d":"1.24E-21"},"full_name=pinoresinol reductase 2. pinoresinol reductase 2. Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows preference for pinoresinol and not lariciresinol.","AT5G10580",null,142.2,-5.255,0.53268,-9.8653,{"v":5.89e-23,"d":"5.89E-23"},{"v":3.77e-21,"d":"3.77E-21"},"plant/protein (Protein of unknown function, DUF599).","AT1G01520","ASG4",94.204,3.7046,0.46922,7.8953,{"v":2.9e-15,"d":"2.90E-15"},{"v":1.82e-13,"d":"1.82E-13"},"full_name=ALTERED SEED GERMINATION 4. Homeodomain-like superfamily protein."]
["AT4G36360","BGAL3",4698,-1.5646,0.15699,-9.9662,2.14E-23,1.37E-21,"full_name=beta-galactosidase 3. beta-galactosidase 3. putative beta-galactosidase (BGAL3 gene)","AT5G42980","TRX3",7408,-1.2366,0.12537,-9.8638,{"v":5.97e-23,"d":"5.97E-23"},{"v":3.82e-21,"d":"3.82E-21"},"full_name=thioredoxin 3. thioredoxin 3. encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.","AT4G34710","ADC2",8427.8,0.92814,0.11762,7.8908,{"v":3e-15,"d":"3.00E-15"},{"v":1.88e-13,"d":"1.88E-13"},"full_name=arginine decarboxylase 2. arginine decarboxylase 2. encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. ADC2 is stress-inducible (osmotic stress). Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Overexpression causes phenotypes similar to GA-deficient plants and these plants show reduced levels of GA due to lower expression levels of AtGA20ox1, AtGA3ox3 and AtGA3ox1."]
["AT3G48670","IDN2",2729.2,-1.0379,0.10428,-9.9529,{"v":2.45e-23,"d":"2.45E-23"},{"v":1.57e-21,"d":"1.57E-21"},"full_name=INVOLVED IN DE NOVO 2. XH/XS domain-containing protein. Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.","AT2G36970",null,197.21,-2.6821,0.27224,-9.8517,{"v":6.74e-23,"d":"6.74E-23"},{"v":4.29e-21,"d":"4.29E-21"},"UDP-Glycosyltransferase superfamily protein.","AT2G21790","RNR1",696.24,-1.2457,0.15812,-7.8781,{"v":3.32e-15,"d":"3.32E-15"},2.07E-13,"full_name=ribonucleotide reductase 1. ribonucleotide reductase 1. encodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair"]
["AT1G04300","MUSE13",1303.9,-1.3426,0.13503,-9.9429,{"v":2.71e-23,"d":"2.71E-23"},1.73E-21,"TRAF-like superfamily protein.","AT1G73190","TIP3;1",179.79,-3.7693,0.38334,-9.8328,{"v":8.13e-23,"d":"8.13E-23"},{"v":5.16e-21,"d":"5.16E-21"},"Aquaporin-like superfamily protein. Moves to the Protein Storage Vacuole in a Golgi independent manner","AT1G09970","LRR XI-23",523.12,1.4878,0.18906,7.8694,{"v":3.56e-15,"d":"3.56E-15"},{"v":2.22e-13,"d":"2.22E-13"},"Leucine-rich receptor-like protein kinase family protein. RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress."]
["AT1G55360",null,1334.5,-1.1116,0.1118,-9.9421,2.73E-23,1.73E-21,"tRNA-splicing ligase (DUF239).","AT1G32470",null,765.47,1.3972,0.14273,9.7892,{"v":1.25e-22,"d":"1.25E-22"},{"v":7.92e-21,"d":"7.92E-21"},"Single hybrid motif superfamily protein.","AT1G06080","ADS1",133.56,-3.1356,0.39879,-7.8627,{"v":3.76e-15,"d":"3.76E-15"},{"v":2.33e-13,"d":"2.33E-13"},"full_name=delta 9 desaturase 1. delta 9 desaturase 1. Encodes a protein homologous to delta 9 acyl-lipid desaturases of cyanobacteria and acyl-CoA desaturases of yeast and mammals. expression down-regulated by cold temperature. It is involved in the desaturation of VLCFAs to make monounsaturated VLCFAs."]
["AT5G02750","SGR9",358.65,-1.8413,0.18551,-9.9255,{"v":3.23e-23,"d":"3.23E-23"},{"v":2.04e-21,"d":"2.04E-21"},"full_name=SHOOT GRAVITROPISM 9. RING/U-box superfamily protein. Encodes an E3 ligase, SHOOT GRAVITROPISM9. Modulates the interaction between statoliths and F-Actin in gravity sensing.","AT3G12490","CYSB",2893.4,-1.0098,0.10316,-9.788,1.27E-22,{"v":7.99e-21,"d":"7.99E-21"},"full_name=cystatin B. cystatin B. Encodes a protein with cysteine proteinase inhibitor activity. Overexpression increases tolerance to abiotic stressors (i.e.salt,osmotic, cold stress).","AT4G17940",null,976.87,1.1548,0.14691,7.8608,{"v":3.82e-15,"d":"3.82E-15"},2.36E-13,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT5G20790",null,300.32,-1.9253,0.19399,-9.9245,3.26E-23,2.05E-21,"transmembrane protein.","AT5G44380","AtBBE24",136.1,-3.56,0.3641,-9.7774,{"v":1.41e-22,"d":"1.41E-22"},{"v":8.81e-21,"d":"8.81E-21"},"FAD-binding Berberine family protein.","AT5G62350",null,892.84,-1.2185,0.15509,-7.8572,{"v":3.93e-15,"d":"3.93E-15"},{"v":2.42e-13,"d":"2.42E-13"},"Plant invertase/pectin methylesterase inhibitor superfamily protein."]
["AT5G10580",null,884.73,-1.9602,0.19755,-9.9225,{"v":3.32e-23,"d":"3.32E-23"},{"v":2.09e-21,"d":"2.09E-21"},"plant/protein (Protein of unknown function, DUF599).","AT1G61800","GPT2",6745.3,-1.5154,0.15499,-9.7774,{"v":1.41e-22,"d":"1.41E-22"},{"v":8.81e-21,"d":"8.81E-21"},"full_name=glucose-6-phosphate/phosphate translocator 2. glucose-6-phosphate/phosphate translocator 2. glucose6-Phosphate/phosphate transporter 2. Expression is upregulated in the shoot of cax1/cax3 mutant.","ATMG00090","rps3",72.725,3.8393,0.48987,7.8373,{"v":4.6e-15,"d":"4.60E-15"},{"v":2.82e-13,"d":"2.82E-13"}]
["AT5G56540","AGP14",665.38,-2.5105,0.25324,-9.9136,{"v":3.63e-23,"d":"3.63E-23"},{"v":2.28e-21,"d":"2.28E-21"},"full_name=arabinogalactan protein 14. arabinogalactan protein 14. Encodes arabinogalactan protein (AGP14). Mutants exhibit longer root hairs.","AT4G16190",null,486.76,1.89,0.19395,9.7451,{"v":1.94e-22,"d":"1.94E-22"},1.21E-20,"Papain family cysteine protease.","AT3G06355",null,3286.4,1.7335,0.22154,7.8248,{"v":5.08e-15,"d":"5.08E-15"},{"v":3.11e-13,"d":"3.11E-13"}]
["AT1G19835","TCS1",1113,-1.1732,0.11835,-9.9128,{"v":3.66e-23,"d":"3.66E-23"},{"v":2.29e-21,"d":"2.29E-21"},"filament-like protein (DUF869).","AT5G51760","AHG1",283.15,-2.3966,0.24618,-9.7349,2.14E-22,{"v":1.33e-20,"d":"1.33E-20"},"full_name=ABA-hypersensitive germination 1. Protein phosphatase 2C family protein. Encodes AHG1 (ABA-hypersensitive germination 1), a putative protein phosphatase 2C (PP2C). Expressed in seeds. AHG1 functions in seed development and germination.","AT1G32900","GBSS1",1975.9,1.2624,0.16167,7.8082,{"v":5.8e-15,"d":"5.80E-15"},{"v":3.54e-13,"d":"3.54E-13"},"full_name=granule bound starch synthase 1. UDP-Glycosyltransferase superfamily protein."]
["AT5G23820","ML3",3056.9,1.1554,0.11657,9.9117,{"v":3.7e-23,"d":"3.70E-23"},{"v":2.3E-21,"d":"2.30E-21"},"MD-2-related lipid recognition domain-containing protein.","AT3G19820","DWF1",2735.3,1.0717,0.11044,9.7043,2.89E-22,{"v":1.79e-20,"d":"1.79E-20"},"full_name=DWARF 1. cell elongation protein / DWARF1 / DIMINUTO (DIM). Involved in the conversion of the early brassinosteroid precursor 24-methylenecholesterol to campesterol. Brassinosteroids affect cellular elongation. Mutants have dwarf phenotype. DWF1 is a Ca2+-dependent calmodulin-binding protein.","AT3G22790","NET1A",212.3,-1.9713,0.25268,-7.8017,{"v":6.11e-15,"d":"6.11E-15"},{"v":3.71e-13,"d":"3.71E-13"},"full_name=Networked 1A. Kinase interacting (KIP1-like) family protein. Encodes a member of the NET superfamily of proteins that potentially couples different membranes to the actin cytoskeleton in plant cells. It binds filamentous actin and is localized to the plasma membrane and plasmodesmata."]
["AT1G32560","AtLEA4-1",167.94,-3.2161,0.32456,-9.9089,{"v":3.81e-23,"d":"3.81E-23"},2.36E-21,"full_name=Late Embryogenesis Abundant 4-1. Late embryogenesis abundant protein, group 1 protein. Encodes LEA4-1, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment.","AT1G36060","TG",316.69,-2.1231,0.21926,-9.6831,{"v":3.56e-22,"d":"3.56E-22"},{"v":2.2e-20,"d":"2.20E-20"},"Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.Overexpression results in increased drought tolerance and vitrified leaves. Binds to DRE/GCC promoter elements and activates expression of aquaporin genes AtTIP1;1, AtTIP2;3, and AtPIP2;2.","AT5G22690",null,182.25,2.3369,0.29991,7.792,{"v":6.6E-15,"d":"6.60E-15"},{"v":3.99e-13,"d":"3.99E-13"},"Disease resistance protein (TIR-NBS-LRR class) family."]
["AT3G23640","HGL1",1809.7,-1.1288,0.11399,-9.9034,{"v":4.02e-23,"d":"4.02E-23"},2.49E-21,"full_name=heteroglycan glucosidase 1. heteroglycan glucosidase 1.","AT5G42300","UBL5",2845.4,-1.5132,0.15633,-9.6793,{"v":3.69e-22,"d":"3.69E-22"},{"v":2.27e-20,"d":"2.27E-20"},"full_name=ubiquitin-like protein 5. ubiquitin-like protein 5.","AT3G02550","LBD41",1411.2,-1.9164,0.24626,-7.782,{"v":7.14e-15,"d":"7.14E-15"},{"v":4.31e-13,"d":"4.31E-13"},"full_name=LOB domain-containing protein 41. LOB domain-containing protein 41."]
["AT1G03230","SAP1",3368.2,1.5654,0.15823,9.8929,{"v":4.47e-23,"d":"4.47E-23"},{"v":2.75e-21,"d":"2.75E-21"},"Eukaryotic aspartyl protease family protein.","AT1G15210","ABCG35",663.97,2.1431,0.22147,9.6768,{"v":3.78e-22,"d":"3.78E-22"},2.32E-20,"full_name=ATP-binding cassette G35. pleiotropic drug resistance 7.","AT2G24420",null,911.54,1.2463,0.16047,7.767,{"v":8.03e-15,"d":"8.03E-15"},{"v":4.83e-13,"d":"4.83E-13"},"DNA repair ATPase-like protein."]
["AT5G56030","HSP81-2",4388.2,0.91202,0.092225,9.889,{"v":4.64e-23,"d":"4.64E-23"},{"v":2.85e-21,"d":"2.85E-21"},"full_name=heat shock protein 81-2. heat shock protein 81-2. A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c.","AT1G48470","GLN1;5",641.83,-1.7703,0.18297,-9.6755,{"v":3.83e-22,"d":"3.83E-22"},2.34E-20,"full_name=glutamine synthetase 1;5. glutamine synthetase 1;5. Encodes cytosolic glutamine synthase isozyme. Expression of mRNA is not detectable in roots.","AT2G14878",null,1669.6,1.1887,0.1531,7.764,8.23E-15,{"v":4.93e-13,"d":"4.93E-13"},"other_RNA."]
["AT1G79245",null,1725.9,1.3914,0.14114,9.8585,{"v":6.3e-23,"d":"6.30E-23"},{"v":3.86e-21,"d":"3.86E-21"},"pseudogene. pseudogene of unknown protein","AT3G53230","AtCDC48B",1360.4,-1.6729,0.17356,-9.6387,{"v":5.49e-22,"d":"5.49E-22"},{"v":3.35e-20,"d":"3.35E-20"},"full_name=cell division cycle 48B. ATPase, AAA-type, CDC48 protein.","AT4G16210","ECHIA",732.94,-1.3161,0.16965,-7.758,{"v":8.63e-15,"d":"8.63E-15"},{"v":5.16e-13,"d":"5.16E-13"},"full_name=enoyl-CoA hydratase/isomerase A. enoyl-CoA hydratase/isomerase A."]
["AT2G32800","AP4.3A",420.72,-1.9903,0.20214,-9.8462,{"v":7.12e-23,"d":"7.12E-23"},{"v":4.34e-21,"d":"4.34E-21"},"protein kinase family protein.","AT5G66690","UGT72E2",90.635,4.1897,0.43485,9.6347,{"v":5.7e-22,"d":"5.70E-22"},{"v":3.47e-20,"d":"3.47E-20"},"UDP-Glycosyltransferase superfamily protein. UGT72E2 is an UDPG:coniferyl alcohol glucosyltransferase which glucosylates sinapyl- and coniferyl aldehydes as well as sinapyl- and coniferyl alcohol. The enzyme is thought to be involved in lignin metabolism. A knockdown mutant line (72E2KD) was obtained using RNAi silencing. A twofold reduction in coniferyl alcohol 4-<i>O</i>-glucoside and sinapyl alcohol 4-<i>O</i>-glucoside was detected in this line compared to wildtype. In comparison, both knockout and knockdown lines of UGT72E1 and UGT72E3, respectively, failed to display the same reduction in phenylpropanoid 4-<i>O</i>-glucosides.","AT3G24190",null,770.75,1.4081,0.18151,7.7573,{"v":8.67e-15,"d":"8.67E-15"},{"v":5.17e-13,"d":"5.17E-13"},"Protein kinase superfamily protein."]
["AT1G33050",null,2112.9,-1.7042,0.17332,-9.8323,{"v":8.18e-23,"d":"8.18E-23"},{"v":4.97e-21,"d":"4.97E-21"},"hypothetical protein.","AT4G18680",null,148.01,-4.0167,0.41693,-9.634,{"v":5.74e-22,"d":"5.74E-22"},3.48E-20,"delay of germination protein.","AT5G51070","ERD1",730.49,1.229,0.15857,7.7505,{"v":9.15e-15,"d":"9.15E-15"},5.44E-13,"full_name=EARLY RESPONSIVE TO DEHYDRATION 1. Clp ATPase. ATP-dependent Clp protease regulatory subunit"]
["AT3G03770",null,800.68,-1.5022,0.15279,-9.8317,{"v":8.22e-23,"d":"8.22E-23"},4.98E-21,"Leucine-rich repeat protein kinase family protein.","AT4G37925","NdhM",88.103,4.5524,0.47276,9.6294,{"v":6.01e-22,"d":"6.01E-22"},{"v":3.63e-20,"d":"3.63E-20"},"full_name=NADH dehydrogenase-like complex M. subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex. Encodes subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly.","AT5G01520","AIRP2",379.51,1.9804,0.25555,7.7495,{"v":9.22e-15,"d":"9.22E-15"},5.46E-13,"full_name=ABA Insensitive RING Protein 2. RING/U-box superfamily protein."]
["AT5G61610",null,215.25,-2.9993,0.30512,-9.8299,{"v":8.37e-23,"d":"8.37E-23"},{"v":5.06e-21,"d":"5.06E-21"},"Oleosin family protein.","AT5G45510",null,652.51,1.4625,0.15196,9.6242,{"v":6.32e-22,"d":"6.32E-22"},{"v":3.8e-20,"d":"3.80E-20"},"Leucine-rich repeat (LRR) family protein.","AT1G80130",null,2087.7,1.0301,0.13302,7.7441,{"v":9.63e-15,"d":"9.63E-15"},5.68E-13,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT4G17840","BCM4",1150.2,-1.1084,0.11288,-9.8193,{"v":9.3e-23,"d":"9.30E-23"},{"v":5.6e-21,"d":"5.60E-21"},"CAAX protease self-immunity protein.","AT5G05600","JOX2",605.85,-1.7609,0.18299,-9.6228,{"v":6.41e-22,"d":"6.41E-22"},{"v":3.84e-20,"d":"3.84E-20"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT3G12955","SAUR74",135.82,2.5489,0.32955,7.7347,1.04E-14,{"v":6.1e-13,"d":"6.10E-13"},"SAUR-like auxin-responsive protein family."]
["AT4G25630","FIB2",1570.4,1.2207,0.12441,9.8117,{"v":1E-22,"d":"1.00E-22"},{"v":6.02e-21,"d":"6.02E-21"},"full_name=fibrillarin 2. fibrillarin 2. encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.2f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated.","AT4G24715",null,125.67,-4.9006,0.5095,-9.6185,{"v":6.68e-22,"d":"6.68E-22"},{"v":3.99e-20,"d":"3.99E-20"},"high-affinity nitrate transporter-like protein.","AT1G04570",null,86.242,3.4121,0.44137,7.7308,1.07E-14,{"v":6.27e-13,"d":"6.27E-13"},"Major facilitator superfamily protein."]
["AT2G27840","HDT4",741.92,1.3937,0.1423,9.7943,{"v":1.19e-22,"d":"1.19E-22"},{"v":7.13e-21,"d":"7.13E-21"},"histone deacetylase-related / HD-like protein. Belongs to the plant specific HD2 type proteins; similar to nucleolar Zea mays histone deacetylase; HD2-p39","AT2G39420","MAGL8",449.98,-1.6248,0.16922,-9.6016,{"v":7.87e-22,"d":"7.87E-22"},{"v":4.69e-20,"d":"4.69E-20"},"alpha/beta-Hydrolases superfamily protein.","AT5G47040","LON2",716.69,1.3876,0.17966,7.7235,1.13E-14,{"v":6.61e-13,"d":"6.61E-13"},"full_name=lon protease 2. lon protease 2. Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins."]
["AT1G02850","BGLU11",11002,-1.1853,0.12108,-9.7898,{"v":1.25e-22,"d":"1.25E-22"},{"v":7.43e-21,"d":"7.43E-21"},"full_name=beta glucosidase 11. beta glucosidase 11.","AT1G80280",null,202.17,2.2803,0.23861,9.5569,1.21E-21,{"v":7.21e-20,"d":"7.21E-20"},"alpha/beta-Hydrolases superfamily protein.","AT5G62220","GT18",541.02,2.025,0.2622,7.7231,{"v":1.14e-14,"d":"1.14E-14"},{"v":6.61e-13,"d":"6.61E-13"},"full_name=glycosyltransferase 18. glycosyltransferase 18. Encodes a Golgi apparatus-localized galactosyltransferase involved in galactosyl-substitution of xyloglucan at position 2."]
["AT2G26250","KCS10",2836.2,-0.97987,0.10025,-9.774,1.46E-22,{"v":8.66e-21,"d":"8.66E-21"},"full_name=3-ketoacyl-CoA synthase 10. 3-ketoacyl-CoA synthase 10. epidermis-specific, encodes KCS10, a putative 3-ketoacyl-CoA synthase. probably involved in the synthesis of long-chain lipids found in the cuticle.","AT3G16460","JAL34",6040.4,1.1931,0.12503,9.5425,1.39E-21,{"v":8.26e-20,"d":"8.26E-20"},"full_name=jacalin-related lectin 34. Mannose-binding lectin superfamily protein.","AT1G73480","MAGL4",475.48,1.6807,0.21764,7.7223,{"v":1.14e-14,"d":"1.14E-14"},6.63E-13,"alpha/beta-Hydrolases superfamily protein."]
["AT4G23500",null,577.99,-1.8108,0.18539,-9.7676,{"v":1.55e-22,"d":"1.55E-22"},{"v":9.19e-21,"d":"9.19E-21"},"Pectin lyase-like superfamily protein.","AT3G01570",null,322.83,-2.9066,0.30479,-9.5365,1.48E-21,{"v":8.73e-20,"d":"8.73E-20"},"Oleosin family protein.","AT3G61490",null,185.64,-2.0984,0.27184,-7.7195,1.17E-14,{"v":6.76e-13,"d":"6.76E-13"},"Pectin lyase-like superfamily protein."]
["AT2G47120",null,173.44,-3.7061,0.37963,-9.7625,1.63E-22,{"v":9.64e-21,"d":"9.64E-21"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT5G65750",null,2013.5,-1.2725,0.13355,-9.5282,{"v":1.6e-21,"d":"1.60E-21"},{"v":9.42e-20,"d":"9.42E-20"},"2-oxoglutarate dehydrogenase, E1 component.","AT3G08720","S6K2",249.12,1.7678,0.22924,7.7116,1.24E-14,{"v":7.17e-13,"d":"7.17E-13"},"full_name=serine/threonine protein kinase 2. serine/threonine protein kinase 2. Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins."]
["AT3G16770","EBP",9088.6,-0.83313,0.085426,-9.7527,{"v":1.8e-22,"d":"1.80E-22"},1.06E-20,"full_name=ethylene-responsive element binding protein. ethylene-responsive element binding protein. Encodes a member of the ERF (ethylene response factor) subfamily B-2 of the plant specific ERF/AP2 transcription factor family (RAP2.3). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.It is localized to the nucleus and acts as a transcriptional activator through the GCC-box. It has been identified as a suppressor of Bax-induced cell death by functional screening in yeast and can also suppress Bax-induced cell death in tobacco plants. Overexpression of this gene in tobacco BY-2 cells confers resistance to H2O2 and heat stresses. Overexpression in Arabidopsis causes upregulation of PDF1.2 and GST6. It is part of the ethylene signaling pathway and is predicted to act downstream of EIN2 and CTR1, but not under EIN3.","AT4G37390","BRU6",179.07,-2.8712,0.30145,-9.5246,{"v":1.66e-21,"d":"1.66E-21"},{"v":9.72e-20,"d":"9.72E-20"},"Auxin-responsive GH3 family protein. Encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin. May function as a negative component in auxin signaling by regulating auxin activity.","AT3G57530","CPK32",335.09,1.7413,0.2259,7.708,1.28E-14,7.35E-13,"full_name=calcium-dependent protein kinase 32. calcium-dependent protein kinase 32. Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro"]
["AT3G17810","PYD1",3213.3,-0.86821,0.089086,-9.7458,1.92E-22,1.13E-20,"full_name=pyrimidine 1. pyrimidine 1. Encodes a protein predicted to have dihydropyrimidine dehydrogenase activity. Its activity has not been demonstrated in vivo, but, it is required for efficient uracil catabolism in Arabidopsis. It localizes to the plastid.","AT3G23880",null,116.2,3.0169,0.31698,9.5178,{"v":1.77e-21,"d":"1.77E-21"},1.03E-19,"F-box and associated interaction domains-containing protein.","AT5G50360","AITR5",821.41,1.4736,0.19122,7.7061,{"v":1.3E-14,"d":"1.30E-14"},{"v":7.44e-13,"d":"7.44E-13"},"von willebrand factor A domain protein."]
["AT5G50200","WR3",261.5,2.3129,0.23759,9.735,2.14E-22,1.25E-20,"full_name=WOUND-RESPONSIVE 3. nitrate transmembrane transporter. Wound-responsive gene 3 (WR3). Encodes a high-affinity nitrate transporter. Up-regulated by nitrate. Involved in jasmonic acid-independent wound signal transduction.","AT1G26400","ATBBE5",236.31,-7.4666,0.78515,-9.5097,{"v":1.91e-21,"d":"1.91E-21"},{"v":1.12e-19,"d":"1.12E-19"},"FAD-binding Berberine family protein.","AT3G15354","SPA3",215.01,1.8842,0.24495,7.692,{"v":1.45e-14,"d":"1.45E-14"},{"v":8.28e-13,"d":"8.28E-13"},"full_name=SPA1-related 3. SPA1-related 3. Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA3 (and SPA4) predominantly regulates elongation growth in adult plants."]
["AT5G65380",null,3211.7,-0.83056,0.08535,-9.7313,{"v":2.22e-22,"d":"2.22E-22"},{"v":1.29e-20,"d":"1.29E-20"},"MATE efflux family protein.","AT5G26290","RAMGAP",206.79,2.242,0.23644,9.4823,2.49E-21,1.45E-19,"TRAF-like family protein.","AT3G20820",null,872.06,-1.1448,0.14884,-7.6916,{"v":1.45e-14,"d":"1.45E-14"},{"v":8.28e-13,"d":"8.28E-13"},"Leucine-rich repeat (LRR) family protein."]
["AT4G11360","RHA1B",301.75,1.9323,0.19879,9.7201,{"v":2.47e-22,"d":"2.47E-22"},1.44E-20,"full_name=RING-H2 finger A1B. RING-H2 finger A1B. Encodes a putative RING-H2 finger protein RHA1b.","AT2G42320",null,428.43,1.5949,0.16849,9.466,{"v":2.91e-21,"d":"2.91E-21"},{"v":1.68e-19,"d":"1.68E-19"},"nucleolar protein gar2-like protein.","AT4G02480",null,3092.8,1.1735,0.15278,7.6811,1.58E-14,{"v":8.96e-13,"d":"8.96E-13"},"AAA-type ATPase family protein."]
["AT5G46110","APE2",1624.5,-1.0836,0.11154,-9.7146,{"v":2.61e-22,"d":"2.61E-22"},{"v":1.52e-20,"d":"1.52E-20"},"full_name=ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2. Glucose-6-phosphate/phosphate translocator-like protein. Encodes a chloroplast triose phosphate / 3-phosphoglycerate translocator that transports triose phosphates derived from the Calvin cycle in the stroma to the cytosol for use in sucrose synthesis and other biosynthetic processes. A tpt mutant has altered acclimation responses.","AT4G12290","CUAO",1432.7,-2.0734,0.21957,-9.4429,{"v":3.62e-21,"d":"3.62E-21"},2.09E-19,"Copper amine oxidase family protein.","AT3G07360","PUB9",271.55,1.7945,0.23384,7.674,{"v":1.67e-14,"d":"1.67E-14"},{"v":9.44e-13,"d":"9.44E-13"},"full_name=plant U-box 9. plant U-box 9. Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays."]
["AT1G09530","PIF3",514.3,1.5242,0.15692,9.7138,2.63E-22,{"v":1.52e-20,"d":"1.52E-20"},"full_name=phytochrome interacting factor 3. phytochrome interacting factor 3. Transcription factor interacting with photoreceptors phyA and phyB. Forms a ternary complex in vitro with G-box element of the promoters of LHY, CCA1. Acts as a negative regulator of phyB signalling. It degrades rapidly after irradiation of dark grown seedlings in a process controlled by phytochromes. Does not play a significant role in controlling light input and function of the circadian clockwork. Binds to G- and E-boxes, but not to other ACEs. Binds to anthocyanin biosynthetic genes in a light- and HY5-independent fashion. PIF3 function as a transcriptional activator can be functionally and mechanistically separated from its role in repression of PhyB mediated processes.","AT3G08940","LHCB4.2",1176.9,1.6856,0.17896,9.4185,{"v":4.57e-21,"d":"4.57E-21"},2.64E-19,"full_name=light harvesting complex photosystem II. light harvesting complex photosystem II. Lhcb4.2 protein (Lhcb4.2, protein involved in the light harvesting complex of photosystem II","AT5G40390","SIP1",246.32,1.9836,0.25911,7.6553,1.93E-14,1.09E-12,"full_name=seed imbibition 1-like. Raffinose synthase family protein. Encodes a protein which might be involved in the formation of verbascose. A T-DNA insertion mutant was shown to have a decreased amount of verbascose (as well as mannitol) whereas the levels of raffinose and stachyose remained unchanged."]
["AT3G27060","TSO2",954.74,1.466,0.15096,9.7113,{"v":2.7e-22,"d":"2.70E-22"},1.56E-20,"full_name=TSO MEANING 'UGLY' IN CHINESE 2. Ferritin/ribonucleotide reductase-like family protein. Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes. TSO2 transcription occurs predominantly at the S-phase of the cell cycle and its expression pattern is consistent with its role in dNDP biosynthesis during DNA replication in actively dividing cells. Critical for cell cycle progression, DNA damage repair and plant development.","AT5G48900",null,140.6,2.6702,0.28373,9.4113,{"v":4.9e-21,"d":"4.90E-21"},{"v":2.81e-19,"d":"2.81E-19"},"Pectin lyase-like superfamily protein.","AT5G61590","DEWAX",410.35,1.5301,0.19996,7.6519,{"v":1.98e-14,"d":"1.98E-14"},{"v":1.11e-12,"d":"1.11E-12"},"Integrase-type DNA-binding superfamily protein. encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5."]
["AT1G10970","ZIP4",728.65,-1.5498,0.15977,-9.7001,{"v":3.01e-22,"d":"3.01E-22"},1.73E-20,"full_name=zinc transporter 4 precursor. zinc transporter. A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root and shoot. Expression is regulated by copper, but response to copper deficiency is detected only after three weeks of deficiency.","AT3G62600","ATERDJ3B",461.46,1.5621,0.16604,9.4083,5.04E-21,{"v":2.89e-19,"d":"2.89E-19"},"DNAJ heat shock family protein. J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.","AT2G47600","MHX",747.19,1.2548,0.16404,7.6495,{"v":2.02e-14,"d":"2.02E-14"},1.13E-12,"full_name=magnesium/proton exchanger. magnesium/proton exchanger. Encodes a magnesium/proton exchanger, member of putative Na+/Ca2+ antiporter gene family"]
["AT1G73190","TIP3;1",874.98,-1.5915,0.16436,-9.6833,{"v":3.55e-22,"d":"3.55E-22"},2.04E-20,"Aquaporin-like superfamily protein. Moves to the Protein Storage Vacuole in a Golgi independent manner","AT1G15980","PnsB1",169.16,2.5966,0.27617,9.402,{"v":5.35e-21,"d":"5.35E-21"},3.06E-19,"full_name=Photosynthetic NDH subcomplex B 1. NDH-dependent cyclic electron flow 1. encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP.","AT5G13370","GH3.15",2210.7,1.0995,0.14397,7.6371,{"v":2.22e-14,"d":"2.22E-14"},1.24E-12,"Auxin-responsive GH3 family protein."]
["AT1G48920","NUC-L1",19348,0.82658,0.085373,9.682,{"v":3.6e-22,"d":"3.60E-22"},{"v":2.06e-20,"d":"2.06E-20"},"full_name=nucleolin like 1. nucleolin like 1. Encodes ATNUC-L1 (NUCLEOLIN LIKE 1), the predominant form of the two nucleolin proteins found in Arabidopsis. This protein is involved in rRNA processing, ribosome biosynthesis, and vascular pattern formation. PARL1 localizes to the nucleolus and parl1 mutants accumulate elevated levels of the unspliced 35S pre-rRNA. parl1 mutants also have defects in cotyledon, leaf, sepal, and petal vein patterning and have reduced stature, reduced fertility, increased bushiness, and reduced root length. The sugar-induced expression of ribosome proteins is also reduced in parl1 mutants.","AT1G04580","AO4",117.22,-4.842,0.51652,-9.3743,{"v":6.96e-21,"d":"6.96E-21"},3.96E-19,"full_name=aldehyde oxidase 4. aldehyde oxidase 4. Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.","AT2G07671",null,60.721,4.3956,0.57568,7.6355,{"v":2.25e-14,"d":"2.25E-14"},{"v":1.25e-12,"d":"1.25E-12"},"ATP synthase subunit C family protein."]
["AT5G18470",null,351.82,1.8568,0.19187,9.6775,{"v":3.76e-22,"d":"3.76E-22"},2.14E-20,"Curculin-like (mannose-binding) lectin family protein.","AT2G18570",null,1567.5,-2.1688,0.23162,-9.3636,{"v":7.71e-21,"d":"7.71E-21"},{"v":4.37e-19,"d":"4.37E-19"},"UDP-Glycosyltransferase superfamily protein.","AT1G15210","ABCG35",569.83,-1.3063,0.17111,-7.6345,2.27E-14,{"v":1.26e-12,"d":"1.26E-12"},"full_name=ATP-binding cassette G35. pleiotropic drug resistance 7."]
["AT3G44460","DPBF2",2248.9,-1.9734,0.20415,-9.6665,{"v":4.18e-22,"d":"4.18E-22"},{"v":2.38e-20,"d":"2.38E-20"},"Basic-leucine zipper (bZIP) transcription factor family protein. basic leucine zipper transcription factor (BZIP67), identical to basic leucine zipper transcription factor GI:18656053 from (Arabidopsis thaliana); identical to cDNA basic leucine zipper transcription factor (atbzip67 gene) GI:18656052. Located in the nucleus and expressed during seed maturation in the cotyledons.","AT2G34020",null,209.07,2.7512,0.29401,9.3576,{"v":8.16e-21,"d":"8.16E-21"},{"v":4.61e-19,"d":"4.61E-19"},"Calcium-binding EF-hand family protein.","AT2G42890","ML2",408.7,1.6421,0.21533,7.6261,2.42E-14,{"v":1.34e-12,"d":"1.34E-12"},"full_name=MEI2-like 2. MEI2-like 2. A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML2 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. AML2 is expressed during early embryo development (heart and torpedo stage) and predominantly in vegetative organs; no significant accumulation was detected in floral apices."]
["AT5G20830","SUS1",432.04,-1.8305,0.18953,-9.6582,{"v":4.54e-22,"d":"4.54E-22"},{"v":2.57e-20,"d":"2.57E-20"},"full_name=sucrose synthase 1. sucrose synthase 1. Encodes a protein with sucrose synthase activity (SUS1).","AT5G23060","CaS",427.94,1.6288,0.17407,9.357,{"v":8.2e-21,"d":"8.20E-21"},{"v":4.63e-19,"d":"4.63E-19"},"full_name=calcium sensing receptor. calcium sensing receptor. Encodes a chloroplast-localized protein that modulates cytoplasmic Ca2+ concentration and is crucial for proper stomatal regulation in response to elevations of external Ca2+. Phosphorylation of this protein is dependent on calcium.","AT2G39570","ACR9",434.55,1.7062,0.22384,7.6223,2.49E-14,1.38E-12,"full_name=ACT domain repeats 9. ACT domain-containing protein. Encodes a ACT domain-containing protein. The ACT domain, named after bacterial aspartate kinase, chorismate mutase and TyrA (prephenate dehydrogenase), is a regulatory domain that serves as an amino acid-binding site in feedback-regulated amino acid metabolic enzymes."]
["AT5G02240",null,10021,-0.74285,0.077146,-9.6291,{"v":6.03e-22,"d":"6.03E-22"},{"v":3.4e-20,"d":"3.40E-20"},"NAD(P)-binding Rossmann-fold superfamily protein. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT4G15530","PPDK",4699.1,-1.0974,0.11734,-9.3518,{"v":8.61e-21,"d":"8.61E-21"},{"v":4.84e-19,"d":"4.84E-19"},"full_name=pyruvate orthophosphate dikinase. pyruvate orthophosphate dikinase. The product of this long transcript was shown to be targeted to the chloroplast, whereas the shorter transcript (no targeting sequence) accumulates in the cytosol. They were also found in slightly different tissues.","AT5G62490","HVA22B",298.29,2.5513,0.33622,7.5881,3.25E-14,1.79E-12,"full_name=HVA22 homologue B. HVA22 homologue B. Part of the AtHVA22 family. Protein expression is ABA- and stress-inducible."]
["AT5G54250","CNGC4",326.93,-2.213,0.23003,-9.6203,{"v":6.57e-22,"d":"6.57E-22"},{"v":3.7e-20,"d":"3.70E-20"},"full_name=cyclic nucleotide-gated cation channel 4. cyclic nucleotide-gated cation channel 4. member of Cyclic nucleotide gated channel family, downstream component of the signaling pathways leading to HR resistance. mutant plants exhibit gene-for-gene disease resistance against avirulent Pseudomonas syringae despite the near-complete absence of the hypersensitive response (HR). Salicylic acid accumulation in dnd2 mutants is completely PAD4-independent.","AT5G19520","MSL9",711.16,1.3818,0.14777,9.3515,{"v":8.64e-21,"d":"8.64E-21"},{"v":4.85e-19,"d":"4.85E-19"},"full_name=mechanosensitive channel of small conductance-like 9. mechanosensitive channel of small conductance-like 9.","AT3G03270","HRU1",847.83,1.3344,0.17588,7.5874,{"v":3.26e-14,"d":"3.26E-14"},1.79E-12,"Adenine nucleotide alpha hydrolases-like superfamily protein."]
["AT1G05680","UGT74E2",167.25,2.7517,0.28611,9.6178,{"v":6.73e-22,"d":"6.73E-22"},{"v":3.78e-20,"d":"3.78E-20"},"full_name=Uridine diphosphate glycosyltransferase 74E2. Uridine diphosphate glycosyltransferase 74E2. Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.","AT1G71695",null,683.91,-1.5032,0.16079,-9.3488,{"v":8.87e-21,"d":"8.87E-21"},4.96E-19,"Peroxidase superfamily protein.","AT3G63210","MARD1",193.04,-2.0058,0.26453,-7.5826,{"v":3.39e-14,"d":"3.39E-14"},{"v":1.86e-12,"d":"1.86E-12"},"mediator of aba-regulated dormancy protein (DUF581). encodes a novel zinc-finger protein with a proline-rich N-terminus, identical to senescence-associated protein SAG102"]
["AT5G41040","RWP1",1241.3,-1.6346,0.17021,-9.6036,{"v":7.72e-22,"d":"7.72E-22"},{"v":4.32e-20,"d":"4.32E-20"},"full_name=REDUCED LEVELS OF WALL-BOUND PHENOLICS 1. HXXXD-type acyl-transferase family protein. Encodes a feruloyl-CoA transferase required for suberin synthesis. Has feruloyl-CoA-dependent feruloyl transferase activity towards substrates with a primary alcohol.","AT5G50260","CEP1",149.33,-2.9467,0.31536,-9.344,{"v":9.27e-21,"d":"9.27E-21"},{"v":5.17e-19,"d":"5.17E-19"},"full_name=cysteine endopeptidase 1. Cysteine proteinases superfamily protein. Encodes a papain-like cysteine protease involved in tapetal programmed cell death and pollen development.","AT1G75370",null,532.25,1.4475,0.19102,7.5776,{"v":3.52e-14,"d":"3.52E-14"},{"v":1.92e-12,"d":"1.92E-12"},"Sec14p-like phosphatidylinositol transfer family protein."]
["AT4G26200","ACS7",316.75,-2.0399,0.21268,-9.5914,{"v":8.69e-22,"d":"8.69E-22"},{"v":4.85e-20,"d":"4.85E-20"},"full_name=1-amino-cyclopropane-1-carboxylate synthase 7. 1-amino-cyclopropane-1-carboxylate synthase 7. Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.","AT1G75490",null,170.04,-2.8544,0.30557,-9.3414,9.51E-21,{"v":5.29e-19,"d":"5.29E-19"},"Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.","AT5G58350","WNK4",111.59,2.5285,0.3337,7.5773,{"v":3.53e-14,"d":"3.53E-14"},{"v":1.92e-12,"d":"1.92E-12"},"full_name=with no lysine (K) kinase 4. with no lysine (K) kinase 4. Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms."]
["AT5G38420","RBCS2B",623.21,1.6151,0.16873,9.5722,{"v":1.05e-21,"d":"1.05E-21"},{"v":5.82e-20,"d":"5.82E-20"},"full_name=Rubisco small subunit 2B. Ribulose bisphosphate carboxylase (small chain) family protein. Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410).","AT5G43060","RD21B",632.21,1.406,0.15075,9.3262,{"v":1.1E-20,"d":"1.10E-20"},{"v":6.08e-19,"d":"6.08E-19"},"full_name=esponsive to dehydration 21B. Granulin repeat cysteine protease family protein.","AT1G54030","MVP1",1474,-1.0857,0.14334,-7.5744,{"v":3.61e-14,"d":"3.61E-14"},{"v":1.96e-12,"d":"1.96E-12"},"full_name=MODIFIED VACUOLE PHENOTYPE 1. GDSL-like Lipase/Acylhydrolase superfamily protein. Encodes a vacuolar protein. Mutation causes organizational defects in the endoplasmic reticulum and aberrant protein trafficking in the plant secretory pathway."]
["AT1G66430","FRK3",1263.1,-1.0955,0.11445,-9.572,{"v":1.05e-21,"d":"1.05E-21"},{"v":5.82e-20,"d":"5.82E-20"},"pfkB-like carbohydrate kinase family protein.","AT2G23180","CYP96A1",157.36,-2.8765,0.30855,-9.3226,1.13E-20,{"v":6.27e-19,"d":"6.27E-19"},"full_name=cytochrome P450, family 96, subfamily A, polypeptide 1. cytochrome P450, family 96, subfamily A, polypeptide 1. member of CYP96A","AT5G57180","CIA2",453.53,-1.4206,0.18772,-7.5678,{"v":3.8e-14,"d":"3.80E-14"},{"v":2.06e-12,"d":"2.06E-12"},"full_name=chloroplast import apparatus 2. chloroplast import apparatus 2. Transcription regulator responsible for specific upregulation of the translocon genes atToc33 and atToc75 in leaves. Involved in protein import into chloroplast."]
["AT2G14247",null,512.65,-1.8,0.18814,-9.5671,{"v":1.1E-21,"d":"1.10E-21"},{"v":6.08e-20,"d":"6.08E-20"},"Expressed protein.","AT3G54140","PTR1",189.93,-2.4303,0.26072,-9.3216,1.15E-20,{"v":6.31e-19,"d":"6.31E-19"},"full_name=peptide transporter 1. peptide transporter 1. Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. GFP-tagged PTR1 localizes to the plasma membrane and has 8 to 11 predicted transmembrane domains. PTR1 is expressed in a number of different vascular tissues throughout the plant based on promoter:GUS expression analysis. ptr1 mutants have a lower dry weight than wild type plants when both are grown with Pro-Ala or Ala-Ala dipeptides as their nitrogen source, suggesting that PTR1 plays a role in dipeptide uptake in the roots. Furthermore N content of ptr1 mutants is lower than that of wild type plants when grown with Pro-Ala or a mixture of dipeptides as nitrogen source","AT5G40880",null,168.92,2.0632,0.27295,7.5591,{"v":4.06e-14,"d":"4.06E-14"},{"v":2.19e-12,"d":"2.19E-12"},"WD-40 repeat family protein / zfwd3 protein (ZFWD3)."]
["AT3G12120","FAD2",53895,-0.87673,0.091714,-9.5594,1.18E-21,{"v":6.53e-20,"d":"6.53E-20"},"full_name=fatty acid desaturase 2. fatty acid desaturase 2. Major enzyme responsible for the synthesis of 18:2 fatty acids in the endoplasmic reticulum. Contains His-rich motifs, which contribute to the interaction with the electron donor cytochrome b5. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.","AT3G61470","LHCA2",3287.6,1.1305,0.12157,9.2986,{"v":1.42e-20,"d":"1.42E-20"},{"v":7.81e-19,"d":"7.81E-19"},"full_name=photosystem I light harvesting complex gene 2. photosystem I light harvesting complex protein. Encodes a component of the light harvesting antenna complex of photosystem I.","ATMG00160","cox2",75.184,4.1727,0.55316,7.5433,{"v":4.58e-14,"d":"4.58E-14"},{"v":2.47e-12,"d":"2.47E-12"}]
["AT4G21990","2024-04-03",556.98,1.5073,0.15801,9.5393,{"v":1.44e-21,"d":"1.44E-21"},{"v":7.91e-20,"d":"7.91E-20"},"full_name=APS reductase 3. APS reductase 3. Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.","AT1G12240","ATBETAFRUCT4",107.05,3.1551,0.33944,9.2952,{"v":1.47e-20,"d":"1.47E-20"},{"v":8.05e-19,"d":"8.05E-19"},"Glycosyl hydrolases family 32 protein. Encodes a vacuolar invertase betaFruct4. betaFruct4 is transported from the endoplasmic reticulum through the intermediate compartments as a membrane protein. The N-terminal cytoplasmic domain contains multiple sequence motifs that are involved at various stages in the trafficking of betaFruct4 from the ER to the central vacuole.","AT5G49990",null,677.79,1.1923,0.15822,7.5359,{"v":4.85e-14,"d":"4.85E-14"},{"v":2.6e-12,"d":"2.60E-12"},"Xanthine/uracil permease family protein."]
["AT5G14800","P5CR",2428.1,0.99616,0.10466,9.5178,{"v":1.77e-21,"d":"1.77E-21"},{"v":9.7e-20,"d":"9.70E-20"},"full_name=pyrroline-5- carboxylate (P5C) reductase. pyrroline-5- carboxylate (P5C) reductase. Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.","AT3G20810","JMJD5",557.05,1.5332,0.16518,9.2817,{"v":1.67e-20,"d":"1.67E-20"},{"v":9.11e-19,"d":"9.11E-19"},"full_name=jumonji domain containing 5. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. JMJD5 encodes a protein which contains a jumonji-C (jmjC) domain. jmjd5 mutant plants have a short-period circadian phenotype. JMJD5 has histone demethylase activity and interacts with EFM to repress FT.","AT1G04830",null,365.56,1.5663,0.20793,7.5326,{"v":4.97e-14,"d":"4.97E-14"},2.66E-12,"Ypt/Rab-GAP domain of gyp1p superfamily protein."]
["AT3G56020",null,1198.1,1.0933,0.11499,9.5076,1.95E-21,1.07E-19,"Ribosomal protein L41 family.","AT4G35100","PIP3",2064.6,1.089,0.11738,9.2775,1.74E-20,{"v":9.45e-19,"d":"9.45E-19"},"full_name=plasma membrane intrinsic protein 3. plasma membrane intrinsic protein 3. a member of the plasma membrane intrinsic protein PIP. functions as aquaporin. Salt-stress-inducible MIP","AT5G55400","ATFIM4",953.99,1.4722,0.19557,7.5276,{"v":5.17e-14,"d":"5.17E-14"},2.76E-12,"Actin binding Calponin homology (CH) domain-containing protein."]
["AT3G28940",null,3012.2,-0.91223,0.09606,-9.4965,2.17E-21,{"v":1.18e-19,"d":"1.18E-19"},"AIG2-like (avirulence induced gene) family protein.","AT1G14670",null,1895.9,1.1444,0.12349,9.2675,{"v":1.91e-20,"d":"1.91E-20"},{"v":1.03e-18,"d":"1.03E-18"},"Endomembrane protein 70 protein family.","AT3G06190","BPM2",535.33,1.3516,0.17993,7.512,{"v":5.82e-14,"d":"5.82E-14"},{"v":3.1e-12,"d":"3.10E-12"},"full_name=BTB-POZ and MATH domain 2. BTB-POZ and MATH domain 2. Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1), AT3G06190 (BPM2), AT2G39760 (BPM3), AT3G03740 (BPM4), AT5G21010 (BPM5) and AT3G43700 (BPM6)."]
["AT1G62710","BETA-VPE",6988.2,-0.91777,0.096958,-9.4657,{"v":2.92e-21,"d":"2.92E-21"},{"v":1.59e-19,"d":"1.59E-19"},"full_name=beta vacuolar processing enzyme. beta vacuolar processing enzyme. Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins.","AT2G45790","PMM",829.28,1.2578,0.1361,9.242,2.42E-20,1.31E-18,"full_name=phosphomannomutase. phosphomannomutase. encodes a phosphomannomutase, involved in ascorbate biosynthesis","AT4G31420","REIL1",601.13,1.3759,0.18361,7.4935,{"v":6.71e-14,"d":"6.71E-14"},{"v":3.56e-12,"d":"3.56E-12"},"Zinc finger protein 622."]
["AT5G19140","AILP1",4062.6,-1.3226,0.13975,-9.4638,{"v":2.97e-21,"d":"2.97E-21"},1.61E-19,"aluminum induced protein with YGL and LRDR motifs.","AT3G16770","EBP",3453.9,-1.396,0.1511,-9.2385,{"v":2.5e-20,"d":"2.50E-20"},{"v":1.35e-18,"d":"1.35E-18"},"full_name=ethylene-responsive element binding protein. ethylene-responsive element binding protein. Encodes a member of the ERF (ethylene response factor) subfamily B-2 of the plant specific ERF/AP2 transcription factor family (RAP2.3). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.It is localized to the nucleus and acts as a transcriptional activator through the GCC-box. It has been identified as a suppressor of Bax-induced cell death by functional screening in yeast and can also suppress Bax-induced cell death in tobacco plants. Overexpression of this gene in tobacco BY-2 cells confers resistance to H2O2 and heat stresses. Overexpression in Arabidopsis causes upregulation of PDF1.2 and GST6. It is part of the ethylene signaling pathway and is predicted to act downstream of EIN2 and CTR1, but not under EIN3.","AT4G24110",null,442.55,-1.5892,0.21275,-7.4701,{"v":8.02e-14,"d":"8.02E-14"},{"v":4.24e-12,"d":"4.24E-12"},"NADP-specific glutamate dehydrogenase."]
["AT2G47240","LACS1",382.09,-2.4981,0.26423,-9.4541,{"v":3.26e-21,"d":"3.26E-21"},{"v":1.76e-19,"d":"1.76E-19"},"full_name=LONG-CHAIN ACYL-COA SYNTHASE 1. AMP-dependent synthetase and ligase family protein. Encodes an acyl-CoA synthetase that acts on long-chain and very-long-chain fatty acids, involved in cuticular wax and cutin biosynthesis","AT1G64770","PnsB2",122.94,2.9232,0.31654,9.2351,{"v":2.58e-20,"d":"2.58E-20"},{"v":1.39e-18,"d":"1.39E-18"},"full_name=Photosynthetic NDH subcomplex B 2. NDH-dependent cyclic electron flow 1. encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP.","AT5G57760",null,64.704,-4.079,0.54679,-7.46,{"v":8.65e-14,"d":"8.65E-14"},4.56E-12,"hypothetical protein."]
["AT1G22360","UGT85A2",197.95,2.4783,0.2624,9.4447,{"v":3.56e-21,"d":"3.56E-21"},{"v":1.92e-19,"d":"1.92E-19"},"full_name=UDP-glucosyl transferase 85A2. UDP-glucosyl transferase 85A2.","AT5G17310","UGP2",454.29,-1.6225,0.17611,-9.2131,{"v":3.17e-20,"d":"3.17E-20"},{"v":1.7E-18,"d":"1.70E-18"},"full_name=UDP-glucose pyrophosphorylase 2. UDP-glucose pyrophosphorylase 2.","AT5G03340","AtCDC48C",758.77,1.3591,0.18252,7.4461,{"v":9.62e-14,"d":"9.62E-14"},{"v":5.06e-12,"d":"5.06E-12"},"full_name=cell division cycle 48C. ATPase, AAA-type, CDC48 protein."]
["AT2G28490",null,7139.5,-3.0486,0.32358,-9.4217,{"v":4.44e-21,"d":"4.44E-21"},{"v":2.39e-19,"d":"2.39E-19"},"RmlC-like cupins superfamily protein.","AT2G35370","GDCH",1110.9,1.1366,0.12365,9.1925,{"v":3.84e-20,"d":"3.84E-20"},{"v":2.05e-18,"d":"2.05E-18"},"full_name=glycine decarboxylase complex H. glycine decarboxylase complex H. Encodes glycine decarboxylase complex H protein. Involved in photorespiration.","AT3G26932","DRB3",255.05,-1.819,0.2446,-7.4366,1.03E-13,{"v":5.42e-12,"d":"5.42E-12"},"full_name=dsRNA-binding protein 3. dsRNA-binding protein 3."]
["AT2G21790","RNR1",1562.2,1.3011,0.13819,9.4154,{"v":4.71e-21,"d":"4.71E-21"},{"v":2.53e-19,"d":"2.53E-19"},"full_name=ribonucleotide reductase 1. ribonucleotide reductase 1. encodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair","AT5G61790","CNX1",1853.5,0.97657,0.10625,9.1911,{"v":3.89e-20,"d":"3.89E-20"},{"v":2.07e-18,"d":"2.07E-18"},"full_name=calnexin 1. calnexin 1.","AT4G01050","TROL",1964.9,1.0281,0.13837,7.4297,1.09E-13,{"v":5.69e-12,"d":"5.69E-12"},"full_name=thylakoid rhodanese-like. thylakoid rhodanese-like protein. hydroxyproline-rich glycoprotein family protein, contains a rhodanese homology domain. Required for anchoring the FNR flavoenzyme to the thylakoid membranes and sustaining high efficiency photosynthetic linear electron flow."]
["AT2G35860","FLA16",292.93,-1.9423,0.20637,-9.4115,{"v":4.89e-21,"d":"4.89E-21"},2.61E-19,"full_name=FASCICLIN-like arabinogalactan protein 16 precursor. FASCICLIN-like arabinogalactan protein 16 precursor.","AT5G04500","GINT1",104.28,-4.3064,0.46914,-9.1793,{"v":4.34e-20,"d":"4.34E-20"},2.31E-18,"glycosyltransferase family protein 47. a member of the Glycosyltransferase Family 64 (according to CAZy Database)","AT4G30440","GAE1",965.33,-1.4669,0.19745,-7.4292,1.09E-13,{"v":5.7e-12,"d":"5.70E-12"},"full_name=UDP-D-glucuronate 4-epimerase 1. UDP-D-glucuronate 4-epimerase 1. UDP-D-glucuronate 4-epimerase"]
["AT2G23130","AGP17",462.66,-1.5112,0.16072,-9.403,{"v":5.3e-21,"d":"5.30E-21"},{"v":2.83e-19,"d":"2.83E-19"},"full_name=arabinogalactan protein 17. arabinogalactan protein 17. AGP17 is a lysine-rich arabinogalactan-protein (AGP) and part of a multi-gene family of glycoproteins with approx. 50 members. It falls into one subclass with AGP18 and AGP19, other lysine-rich AGPs. 84% of its proline residues are hydroxylated to hydroproline and its heavy glycosylation accounts for appr. 69% of the molecular weight. The main glycosyl residues are arabinose (30.1%) and galactose (55.1%). Glycosyl linkages are consistent with type II arabinogalactans. AGP17 is predicted to have a glycosylphosphatidylinositol (GPI)anchor and is localized to the plasma membrane and Hechtian strands. It is expressed in young/old leaves, shoots, suspension cultures and flowers.","AT1G75280",null,424.56,-1.6664,0.18168,-9.1722,{"v":4.63e-20,"d":"4.63E-20"},2.46E-18,"NmrA-like negative transcriptional regulator family protein. isoflavone reductase, putative, identical to SP:P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: isoflavone reductase. Involved in response to oxidative stress.","AT1G69800",null,365.15,1.4828,0.19969,7.4258,1.12E-13,{"v":5.82e-12,"d":"5.82E-12"},"Cystathionine beta-synthase (CBS) protein."]
["AT2G39010","PIP2E",400.99,-1.7257,0.1836,-9.3993,{"v":5.49e-21,"d":"5.49E-21"},{"v":2.92e-19,"d":"2.92E-19"},"full_name=plasma membrane intrinsic protein 2E. plasma membrane intrinsic protein 2E.","AT1G73120",null,1680.4,-1.4689,0.16043,-9.1564,{"v":5.37e-20,"d":"5.37E-20"},{"v":2.84e-18,"d":"2.84E-18"},"F-box/RNI superfamily protein.","AT1G74840",null,503.64,1.3155,0.17716,7.4257,1.12E-13,{"v":5.82e-12,"d":"5.82E-12"},"Homeodomain-like superfamily protein."]
["AT2G29940","ABCG31",336.97,-2.7253,0.29047,-9.3822,{"v":6.46e-21,"d":"6.46E-21"},{"v":3.42e-19,"d":"3.42E-19"},"full_name=ATP-binding cassette G31. pleiotropic drug resistance 3.","AT3G44990","XTH31",721.71,1.449,0.15826,9.1558,{"v":5.39e-20,"d":"5.39E-20"},{"v":2.85e-18,"d":"2.85E-18"},"full_name=XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31. xyloglucan endo-transglycosylase-related 8. Encodes a xyloglucan endotransglycosylase/hydrolase.","AT3G12580","HSP70",5912.6,4.4236,0.59695,7.4104,{"v":1.26e-13,"d":"1.26E-13"},{"v":6.51e-12,"d":"6.51E-12"},"full_name=heat shock protein 70. heat shock protein 70."]
["AT4G24920",null,750.99,-1.2846,0.13692,-9.3819,{"v":6.48e-21,"d":"6.48E-21"},{"v":3.42e-19,"d":"3.42E-19"},"secE/sec61-gamma protein transport protein.","AT2G05100","LHCB2.1",238.07,2.4107,0.26367,9.1431,{"v":6.07e-20,"d":"6.07E-20"},3.19E-18,"full_name=photosystem II light harvesting complex gene 2.1. photosystem II light harvesting complex protein 2.1. Lhcb2.1 protein encoding a subunit of the light harvesting complex II. Member of a gene family with high degree of sequence similarity. Initially LHCB2.3 was considered as a separate gene but appears to be an allele of LHCB2.1.","AT4G18010","IP5PII",60.702,4.2424,0.57281,7.4062,{"v":1.3E-13,"d":"1.30E-13"},{"v":6.7e-12,"d":"6.70E-12"},"full_name=INOSITOL(1,4,5)P3 5-PHOSPHATASE II. myo-inositol polyphosphate 5-phosphatase 2. Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not appear to be active against phosphatidylinositol 4,5 bisphosphate. Overexpression of this gene renders plants insensitive to ABA in germination and growth assays."]
["AT5G16130",null,5110,0.76113,0.081144,9.38,{"v":6.6e-21,"d":"6.60E-21"},3.48E-19,"Ribosomal protein S7e family protein.","AT4G24780","PLL19",77.843,3.8794,0.42444,9.1402,{"v":6.23e-20,"d":"6.23E-20"},{"v":3.27e-18,"d":"3.27E-18"},"Pectin lyase-like superfamily protein.","AT2G37640","EXP3",2203.1,-0.96996,0.13104,-7.4022,{"v":1.34e-13,"d":"1.34E-13"},{"v":6.89e-12,"d":"6.89E-12"},"Barwin-like endoglucanases superfamily protein. member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana."]
["AT5G08260","scpl35",7083,0.91902,0.098002,9.3776,{"v":6.75e-21,"d":"6.75E-21"},{"v":3.55e-19,"d":"3.55E-19"},"full_name=serine carboxypeptidase-like 35. serine carboxypeptidase-like 35.","AT1G12900","GAPA-2",897.39,1.2512,0.1371,9.1261,{"v":7.1e-20,"d":"7.10E-20"},{"v":3.72e-18,"d":"3.72E-18"},"full_name=glyceraldehyde 3-phosphate dehydrogenase A subunit 2. glyceraldehyde 3-phosphate dehydrogenase A subunit 2.","AT3G17170","RFC3",595.03,-1.383,0.18685,-7.4017,{"v":1.34e-13,"d":"1.34E-13"},{"v":6.9e-12,"d":"6.90E-12"},"full_name=REGULATOR OF FATTY-ACID COMPOSITION 3. Translation elongation factor EF1B/ribosomal protein S6 family protein."]
["AT1G80240","DGR1",135.5,-2.857,0.30482,-9.3726,{"v":7.08e-21,"d":"7.08E-21"},{"v":3.71e-19,"d":"3.71E-19"},"full_name=DUF642 L-GalL responsive gene 1. choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642).","AT1G20340","DRT112",1932.6,1.2418,0.13665,9.0878,{"v":1.01e-19,"d":"1.01E-19"},{"v":5.27e-18,"d":"5.27E-18"},"full_name=DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112. Cupredoxin superfamily protein. recombination and DNA-damage resistance protein (DRT112) One of two Arabidopsis plastocyanin genes. Predominant form, expressed 10x higher than PETE1. PETE2 is thought to be post-transcriptionally regulated via copper accumulation and is involved in copper homeostasis. Mutation of this gene does not have obvious effect on photosynthesis. In plsp1-1 mutant plastids, the nonmature form of the protein localizes in the membrane.","AT5G64840","ABCF5",1229.4,1.1046,0.14932,7.3975,{"v":1.39e-13,"d":"1.39E-13"},{"v":7.1E-12,"d":"7.10E-12"},"full_name=ATP-binding cassette F5. general control non-repressible 5. member of GCN subfamily"]
["AT4G20140","GSO1",566.89,-1.4046,0.15014,-9.3547,{"v":8.38e-21,"d":"8.38E-21"},4.38E-19,"full_name=GASSHO1. Leucine-rich repeat transmembrane protein kinase. Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis.","AT5G09590","MTHSC70-2",1910.9,-1.0589,0.11688,-9.0598,{"v":1.31e-19,"d":"1.31E-19"},{"v":6.8E-18,"d":"6.80E-18"},"full_name=mitochondrial HSO70 2. mitochondrial HSO70 2. heat shock protein 70 (Hsc70-5); nuclear","AT2G33210","HSP60-2",442.03,-1.3445,0.18186,-7.3932,1.43E-13,{"v":7.31e-12,"d":"7.31E-12"},"full_name=heat shock protein 60-2. heat shock protein 60-2."]
["AT5G64840","ABCF5",1366.7,0.99443,0.10636,9.3495,{"v":8.8e-21,"d":"8.80E-21"},{"v":4.59e-19,"d":"4.59E-19"},"full_name=ATP-binding cassette F5. general control non-repressible 5. member of GCN subfamily","AT3G19200",null,348.82,-1.959,0.21669,-9.0409,{"v":1.55e-19,"d":"1.55E-19"},{"v":8.06e-18,"d":"8.06E-18"},"hypothetical protein.","AT1G80110","PP2-B11",345.73,1.7637,0.23865,7.3904,{"v":1.46e-13,"d":"1.46E-13"},{"v":7.45e-12,"d":"7.45E-12"},"full_name=phloem protein 2-B11. phloem protein 2-B11."]
["AT4G26740","ATS1",1460.7,-3.5821,0.38334,-9.3446,{"v":9.22e-21,"d":"9.22E-21"},{"v":4.79e-19,"d":"4.79E-19"},"full_name=seed gene 1. peroxygenase 1. Encodes caleosin, a 27-kDa protein found within seed lipid bodies. Gene is expressed preferentially in the embryo, has similarity to a rice ABA-responsive gene, EFA27. Catalyze hydroperoxide-dependent mono-oxygenation reactions. Require calcium for peroxygenase activity. Probably deeply buried in lipid droplets or microsomes.","AT5G28910",null,184.37,-2.9276,0.3242,-9.0303,1.71E-19,{"v":8.87e-18,"d":"8.87E-18"},"alpha-(1,6)-fucosyltransferase.","AT5G44190","GLK2",387.32,1.4199,0.19235,7.3816,{"v":1.56e-13,"d":"1.56E-13"},{"v":7.93e-12,"d":"7.93E-12"},"full_name=GOLDEN2-like 2. GOLDEN2-like 2. Encodes GLK2, Golden2-like 2, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK1, Golden2-like 1, is encoded by At2g20570. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus."]
["AT2G38470","WRKY33",136.98,3.2689,0.35058,9.3244,1.12E-20,{"v":5.79e-19,"d":"5.79E-19"},"full_name=WRKY DNA-binding protein 33. WRKY DNA-binding protein 33. Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress.","AT1G33700",null,104.45,-3.724,0.41394,-8.9965,{"v":2.33e-19,"d":"2.33E-19"},{"v":1.2e-17,"d":"1.20E-17"},"Beta-glucosidase, GBA2 type family protein.","AT5G43150",null,385.63,2.1638,0.29323,7.3792,1.59E-13,{"v":8.06e-12,"d":"8.06E-12"},"elongation factor."]
["AT2G36800","DOGT1",221.88,3.4939,0.37492,9.3192,1.17E-20,{"v":6.06e-19,"d":"6.06E-19"},"full_name=don-glucosyltransferase 1. don-glucosyltransferase 1. Encodes a DON-Glucosyltransferase. The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype.","AT3G02230","RGP1",2024.4,1.0278,0.1143,8.9928,{"v":2.41e-19,"d":"2.41E-19"},1.24E-17,"full_name=reversibly glycosylated polypeptide 1. reversibly glycosylated polypeptide 1. RGP1 is a UDP-arabinose mutase that catalyzes the interconversion between the pyranose and furanose forms of UDP-L-arabinose. It appears to be required for proper cell wall formation. rgp1/rgp2 (at5g15650) double mutants have a male gametophyte lethal phenotype. RGP1 fusion proteins can be found in the cytosol and peripherally associated with the Golgi apparatus.","AT1G69410","ELF5A-3",1230.9,1.0614,0.14394,7.3742,1.65E-13,{"v":8.32e-12,"d":"8.32E-12"},"full_name=eukaryotic elongation factor 5A-3. eukaryotic elongation factor 5A-3. Encodes eIF5A-2, a putative eukaryotic translation initiation factor. There are three eIF5A coding genes in Arabidopsis: eIF5A-1/At1g13950, eIF5A-2/At1g26630 and eIF5A-3/At1g69410."]
["AT4G16370","OPT3",1290.3,-1.2372,0.1331,-9.2952,{"v":1.47e-20,"d":"1.47E-20"},7.57E-19,"full_name=oligopeptide transporter. oligopeptide transporter. Encodes an oligopeptide transporter involved in metal homeostasis. It loads iron into the phloem, facilitates iron recirculation from the xylem to the phloem, and regulates both shoot-to-root iron signaling and iron redistribution from mature to developing tissues.","AT1G17170","GSTU24",155.18,-2.9472,0.32827,-8.9777,{"v":2.76e-19,"d":"2.76E-19"},{"v":1.42e-17,"d":"1.42E-17"},"full_name=glutathione S-transferase TAU 24. glutathione S-transferase TAU 24. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","AT3G02470","SAMDC",5940.8,0.84182,0.11416,7.3741,1.66E-13,{"v":8.32e-12,"d":"8.32E-12"},"full_name=S-adenosylmethionine decarboxylase. S-adenosylmethionine decarboxylase. Encodes a S-adenosylmethionine decarboxylase involved in polyamine biosynthesis."]
["AT4G24715",null,569.88,-1.378,0.14835,-9.2893,1.55E-20,{"v":7.98e-19,"d":"7.98E-19"},"high-affinity nitrate transporter-like protein.","AT1G17100","HBP1",1281.8,-1.6113,0.17961,-8.971,{"v":2.94e-19,"d":"2.94E-19"},{"v":1.5E-17,"d":"1.50E-17"},"full_name=haem-binding protein 1. SOUL heme-binding family protein.","AT2G47770","TSPO",1070.2,4.2156,0.5717,7.3739,1.66E-13,{"v":8.32e-12,"d":"8.32E-12"},"full_name=TSPO(outer membrane tryptophan-rich sensory protein)-related. TSPO(outer membrane tryptophan-rich sensory protein)-like protein. Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks. It is degraded through the autophagy pathway."]
["AT1G32060","PRK",1324.9,-1.0131,0.10906,-9.289,1.56E-20,{"v":7.98e-19,"d":"7.98E-19"},"full_name=phosphoribulokinase. phosphoribulokinase.","AT4G12870",null,318.32,2.5541,0.28515,8.9571,{"v":3.33e-19,"d":"3.33E-19"},{"v":1.7e-17,"d":"1.70E-17"},"Gamma interferon responsive lysosomal thiol (GILT) reductase family protein.","AT3G01520",null,567.79,1.607,0.21795,7.3733,1.66E-13,{"v":8.32e-12,"d":"8.32E-12"},"Adenine nucleotide alpha hydrolases-like superfamily protein."]
["AT2G24420",null,1532,-0.94432,0.1017,-9.2855,{"v":1.61e-20,"d":"1.61E-20"},{"v":8.22e-19,"d":"8.22E-19"},"DNA repair ATPase-like protein.","AT1G21400",null,404.45,-2.163,0.24176,-8.9472,3.64E-19,1.86E-17,"Thiamin diphosphate-binding fold (THDP-binding) superfamily protein.","AT4G29070",null,291.69,1.5614,0.21177,7.3732,1.67E-13,{"v":8.32e-12,"d":"8.32E-12"},"Phospholipase A2 family protein."]
["AT1G60090","BGLU4",507.16,1.9292,0.20777,9.2853,{"v":1.61e-20,"d":"1.61E-20"},{"v":8.22e-19,"d":"8.22E-19"},"full_name=beta glucosidase 4. beta glucosidase 4.","AT1G19150","Lhca6",188.68,2.2384,0.25029,8.9433,{"v":3.78e-19,"d":"3.78E-19"},1.92E-17,"full_name=photosystem I light harvesting complex gene 6. PSI type II chlorophyll a/b-binding protein (Lhca2*1). PSI type II chlorophyll a/b-binding protein (Lhca2*1) mRNA,","AT1G14900","HMGA",356.02,-1.4599,0.19804,-7.3717,{"v":1.68e-13,"d":"1.68E-13"},{"v":8.38e-12,"d":"8.38E-12"},"full_name=high mobility group A. high mobility group A. Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA."]
["AT5G54190","PORA",96.248,4.3058,0.46388,9.2822,1.66E-20,8.44E-19,"full_name=protochlorophyllide oxidoreductase A. protochlorophyllide oxidoreductase A. light-dependent NADPH:protochlorophyllide oxidoreductase A","AT1G09970","LRR XI-23",710.47,-1.5235,0.17058,-8.9316,{"v":4.2e-19,"d":"4.20E-19"},{"v":2.13e-17,"d":"2.13E-17"},"Leucine-rich receptor-like protein kinase family protein. RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress.","AT1G47395","FEP2",97.928,-2.9228,0.3965,-7.3713,{"v":1.69e-13,"d":"1.69E-13"},{"v":8.39e-12,"d":"8.39E-12"},"hypothetical protein."]
["AT1G56110","NOP56",3054.4,0.92876,0.10007,9.2812,{"v":1.68e-20,"d":"1.68E-20"},{"v":8.5E-19,"d":"8.50E-19"},"full_name=homolog of nucleolar protein NOP56. NOP56-like pre RNA processing ribonucleoprotein. NOP56-like protein","AT1G76160","sks5",1082.6,1.0931,0.12246,8.9258,{"v":4.42e-19,"d":"4.42E-19"},{"v":2.24e-17,"d":"2.24E-17"},"full_name=SKU5 similar 5. SKU5 similar 5.","AT2G44410",null,532.42,1.3378,0.18156,7.3684,{"v":1.73e-13,"d":"1.73E-13"},{"v":8.55e-12,"d":"8.55E-12"},"RING/U-box superfamily protein."]
["AT1G14940",null,11841,-1.0862,0.1172,-9.268,{"v":1.9e-20,"d":"1.90E-20"},{"v":9.6e-19,"d":"9.60E-19"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein.","AT3G28550","EXT16",97.588,7.0601,0.79134,8.9217,{"v":4.59e-19,"d":"4.59E-19"},{"v":2.31e-17,"d":"2.31E-17"},"Proline-rich extensin-like family protein.","AT4G34419",null,243.15,-1.7015,0.23103,-7.3648,1.77E-13,{"v":8.76e-12,"d":"8.76E-12"},"hypothetical protein."]
["AT1G08340",null,161.51,-2.8309,0.3056,-9.2634,{"v":1.98e-20,"d":"1.98E-20"},{"v":9.99e-19,"d":"9.99E-19"},"Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein.","AT4G12420","SKU5",380.44,1.7927,0.20134,8.9039,{"v":5.39e-19,"d":"5.39E-19"},{"v":2.71e-17,"d":"2.71E-17"},"Cupredoxin superfamily protein. Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues.","AT2G46660","CYP78A6",126.74,2.3797,0.32315,7.3642,1.78E-13,{"v":8.77e-12,"d":"8.77E-12"},"full_name=cytochrome P450, family 78, subfamily A, polypeptide 6. cytochrome P450, family 78, subfamily A, polypeptide 6. Encodes a member of CYP78A cytochrome P450 monooxygenase protein family that is required in the sporophytic tissue of the mother plant to promote seed growth."]
["AT5G15200",null,8450.8,0.71969,0.077774,9.2536,{"v":2.17e-20,"d":"2.17E-20"},1.09E-18,"Ribosomal protein S4.","AT5G07200","GA20OX3",243.48,-2.6246,0.29506,-8.8951,{"v":5.84e-19,"d":"5.84E-19"},{"v":2.93e-17,"d":"2.93E-17"},"full_name=gibberellin 20-oxidase 3. gibberellin 20-oxidase 3. encodes a gibberellin 20-oxidase.","AT4G25670","DOB1",880.55,1.1408,0.15498,7.3608,1.83E-13,{"v":8.98e-12,"d":"8.98E-12"},"stress response NST1-like protein."]
["AT5G28540","BIP1",3827.3,-0.81302,0.087863,-9.2533,{"v":2.18e-20,"d":"2.18E-20"},1.09E-18,"heat shock protein 70 (Hsp 70) family protein. Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.","AT5G54770","THI1",15048,-0.99617,0.11203,-8.8922,{"v":5.99e-19,"d":"5.99E-19"},{"v":2.99e-17,"d":"2.99E-17"},"thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4). Encodes a thiamine biosynthetic gene that has a dual function in thiamine biosynthesis and mitochondrial DNA damage tolerance. It appears to be involved in producing the thiazole portion of thiamine (vitamin B1). A crystal structure of the protein reveals that it forms a 2-ring homo-octamer.","AT3G05500","LDAP3",766.28,1.1678,0.15886,7.351,{"v":1.97e-13,"d":"1.97E-13"},9.63E-12,"Rubber elongation factor protein (REF). Encodes a protein that associates with lipid droplet surfaces."]
["AT5G07260",null,127.26,-2.894,0.31283,-9.2511,2.22E-20,{"v":1.11e-18,"d":"1.11E-18"},"START (StAR-related lipid-transfer) lipid-binding domain-containing protein.","AT5G66760","SDH1-1",2987.7,-1.0153,0.11428,-8.8846,6.41E-19,{"v":3.2e-17,"d":"3.20E-17"},"full_name=succinate dehydrogenase 1-1. succinate dehydrogenase 1-1. One of two genes in Arabidopsis that encode a flavoprotein subunit of the mitochondrial succinate dehydrogenase complex.","AT2G16586",null,1301.7,3.3639,0.4578,7.348,2.01E-13,{"v":9.83e-12,"d":"9.83E-12"},"transmembrane protein."]
["AT1G80160","GLYI7",963.7,-1.7098,0.18484,-9.25,{"v":2.25e-20,"d":"2.25E-20"},1.12E-18,"full_name=glyoxylase I 7. Lactoylglutathione lyase / glyoxalase I family protein.","AT1G19180","JAZ1",1158.7,-1.4847,0.1673,-8.8742,{"v":7.04e-19,"d":"7.04E-19"},{"v":3.5e-17,"d":"3.50E-17"},"full_name=jasmonate-zim-domain protein 1. jasmonate-zim-domain protein 1. JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.","AT1G03940",null,238.97,-1.7485,0.23799,-7.3471,{"v":2.03e-13,"d":"2.03E-13"},{"v":9.87e-12,"d":"9.87E-12"},"HXXXD-type acyl-transferase family protein."]
["AT4G34480",null,601.98,-1.355,0.14663,-9.2409,{"v":2.44e-20,"d":"2.44E-20"},{"v":1.22e-18,"d":"1.22E-18"},"O-Glycosyl hydrolases family 17 protein.","AT2G17720","P4H5",483.9,1.3838,0.15603,8.8691,{"v":7.38e-19,"d":"7.38E-19"},{"v":3.66e-17,"d":"3.66E-17"},"full_name=prolyl 4-hydroxylase 5. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. Encodes a prolyl 4-hydroxylase that modifies the extensin proteins in root hair cells.","AT5G64170","LNK1",297.95,1.6716,0.22758,7.3453,{"v":2.05e-13,"d":"2.05E-13"},{"v":9.98e-12,"d":"9.98E-12"},"dentin sialophosphoprotein-like protein."]
["AT4G35640","SERAT3;2",184.56,2.4175,0.26183,9.2331,2.63E-20,1.31E-18,"full_name=serine acetyltransferase 3;2. serine acetyltransferase 3;2. Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. Expression is induced in both roots and shoots under sulfur-starved conditions.","AT1G29310","SEC. 61-&#945;1",350.43,1.5931,0.17965,8.8675,{"v":7.48e-19,"d":"7.48E-19"},{"v":3.7e-17,"d":"3.70E-17"},"SecY protein transport family protein.","AT1G16030","Hsp70b",256.33,2.0833,0.28375,7.342,{"v":2.1e-13,"d":"2.10E-13"},{"v":1.02e-11,"d":"1.02E-11"},"full_name=heat shock protein 70B. heat shock protein 70B."]
["AT4G24280","cpHsc70-1",4994,0.84868,0.091924,9.2324,{"v":2.65e-20,"d":"2.65E-20"},1.31E-18,"full_name=chloroplast heat shock protein 70-1. chloroplast heat shock protein 70-1. Involved in protein import into chloroplasts during early developmental stages.","AT1G52040","MBP1",96.74,3.0688,0.34641,8.8587,{"v":8.1e-19,"d":"8.10E-19"},{"v":3.99e-17,"d":"3.99E-17"},"full_name=myrosinase-binding protein 1. myrosinase-binding protein 1. Encodes myrosinase-binding protein expressed in flowers.","AT4G30460",null,98.461,2.7116,0.3694,7.3404,2.13E-13,{"v":1.03e-11,"d":"1.03E-11"},"glycine-rich protein."]
["AT5G13420","TRA2",3025.3,-1.0255,0.11109,-9.2314,{"v":2.67e-20,"d":"2.67E-20"},{"v":1.32e-18,"d":"1.32E-18"},"full_name=transaldolase 2. Aldolase-type TIM barrel family protein.","AT5G25980","TGG2",457.75,-1.5102,0.1705,-8.8573,{"v":8.19e-19,"d":"8.19E-19"},{"v":4.03e-17,"d":"4.03E-17"},"full_name=glucoside glucohydrolase 2. glucoside glucohydrolase 2. Myrosinase (thioglucoside glucohydrolase) gene involved in glucosinoloate metabolism.","AT3G02110","scpl25",257.25,-1.8765,0.25583,-7.3351,{"v":2.21e-13,"d":"2.21E-13"},{"v":1.07e-11,"d":"1.07E-11"},"full_name=serine carboxypeptidase-like 25. serine carboxypeptidase-like 25."]
["AT5G42020","BIP2",3034.3,-0.78986,0.085638,-9.2233,{"v":2.88e-20,"d":"2.88E-20"},1.42E-18,"Heat shock protein 70 (Hsp 70) family protein. Luminal binding protein (BiP2) involved in polar nuclei fusion during proliferation of endosperm nuclei.","AT1G64670","BDG1",227.45,2.046,0.23136,8.8434,{"v":9.29e-19,"d":"9.29E-19"},{"v":4.56e-17,"d":"4.56E-17"},"full_name=BODYGUARD1. alpha/beta-Hydrolases superfamily protein. Encodes a epidermally expressed extracellular protein that likely functions as an alpha-beta hydrolase and is required for normal cuticle formation. Homozygous mutant plants are dwarfed and have abnormal leaves, collapsed cells, reduced numbers of trichomes. The specific role of BDG is unclear: it may function in cutin biosynthesis or as a cross-linking enzyme in the cell wall itself.","AT5G07070","CIPK2",85.972,2.944,0.40202,7.3229,{"v":2.43e-13,"d":"2.43E-13"},{"v":1.17e-11,"d":"1.17E-11"},"full_name=CBL-interacting protein kinase 2. CBL-interacting protein kinase 2. Encodes CBL-interacting protein kinase 2 (CIPK2)."]
["AT1G55670","PSAG",1838.3,-0.94007,0.10208,-9.2093,3.28E-20,{"v":1.61e-18,"d":"1.61E-18"},"full_name=photosystem I subunit G. photosystem I subunit G. Encodes subunit G of photosystem I, an 11-kDa membrane protein that plays an important role in electron transport between plastocyanin and PSI and is involved in the stability of the PSI complex. PSI-G subunit is bound to PSI-B and is in contact with Lhca1. The protein inserts into thylakoids by a direct or spontaneous pathway that does not involve the activities of any known chloroplast protein-targeting machinery. PSI-G appears to be directly or indirectly involved in the interaction between Photosystem I and plastocyanin.","AT3G60750","TKL1",5087.3,0.88366,0.10004,8.8334,1.02E-18,{"v":4.97e-17,"d":"4.97E-17"},"Transketolase.","AT1G07430","HAI2",349.35,1.9302,0.26384,7.3158,{"v":2.56e-13,"d":"2.56E-13"},1.23E-11,"full_name=highly ABA-induced PP2C gene 2. highly ABA-induced PP2C protein 2. Encodes a member of the group A protein phosphatase 2C (PP2C) family that is responsible for negatively regulating seed dormancy."]
["AT4G22290","SHOU4L2",402.47,-1.5582,0.16929,-9.2048,{"v":3.42e-20,"d":"3.42E-20"},{"v":1.68e-18,"d":"1.68E-18"},"Ubiquitin-specific protease family C19-related protein.","AT2G32090","GLXI-LIKE;9",554.45,-1.4891,0.16861,-8.8317,{"v":1.03e-18,"d":"1.03E-18"},{"v":5.03e-17,"d":"5.03E-17"},"Lactoylglutathione lyase / glyoxalase I family protein.","AT4G20830","ATBBE19",333.12,1.5142,0.20749,7.2975,{"v":2.93e-13,"d":"2.93E-13"},{"v":1.4E-11,"d":"1.40E-11"},"FAD-binding Berberine family protein."]
["AT1G54010","GLL23",9684.3,1.0393,0.11292,9.2038,{"v":3.46e-20,"d":"3.46E-20"},{"v":1.69e-18,"d":"1.69E-18"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT2G30520","RPT2",67.057,4.4441,0.5043,8.8122,1.23E-18,{"v":5.97e-17,"d":"5.97E-17"},"full_name=ROOT PHOTOTROPISM 2. Phototropic-responsive NPH3 family protein. light inducible root phototropism 2 encoding a signal transducer of the phototropic response in Arabidopsis","AT1G07530","SCL14",546.56,1.2884,0.17661,7.2952,{"v":2.98e-13,"d":"2.98E-13"},1.42E-11,"full_name=SCARECROW-like 14. SCARECROW-like 14. Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm."]
["AT2G38710",null,718.62,-1.2534,0.13628,-9.1974,{"v":3.67e-20,"d":"3.67E-20"},{"v":1.79e-18,"d":"1.79E-18"},"AMMECR1 family.","AT1G64660","MGL",1855.1,-1.2712,0.14439,-8.8042,{"v":1.32e-18,"d":"1.32E-18"},{"v":6.4e-17,"d":"6.40E-17"},"full_name=methionine gamma-lyase. methionine gamma-lyase. Encodes a functional methionine gamma-lyase, a cytosolic enzyme catalyzes the degradation of methionine into methanethiol, alpha-ketobutyrate and ammonia. The catabolism of excess methionine is important to methionine homeostasis.","AT1G79520",null,94.906,2.7726,0.38079,7.2813,3.31E-13,{"v":1.57e-11,"d":"1.57E-11"},"Cation efflux family protein."]
["AT1G54630","ACP3",1305.5,-1.2367,0.13504,-9.1582,{"v":5.28e-20,"d":"5.28E-20"},{"v":2.57e-18,"d":"2.57E-18"},"full_name=acyl carrier protein 3. acyl carrier protein 3. encodes an acyl carrier protein expressed in leaves, roots, and dry seeds. Gene expression is not regulated by light.","AT5G63810","BGAL10",1593.6,1.1257,0.12803,8.7927,{"v":1.46e-18,"d":"1.46E-18"},{"v":7.07e-17,"d":"7.07E-17"},"full_name=beta-galactosidase 10. beta-galactosidase 10. member of Glycoside Hydrolase Family 35","AT1G23130",null,288.1,1.5575,0.21402,7.2775,{"v":3.4e-13,"d":"3.40E-13"},{"v":1.61e-11,"d":"1.61E-11"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein."]
["AT1G58030","CAT2",1594.8,1.4333,0.15672,9.1452,{"v":5.95e-20,"d":"5.95E-20"},2.89E-18,"full_name=cationic amino acid transporter 2. cationic amino acid transporter 2. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast.","AT5G38410","RBCS3B",5913.2,1.3724,0.15628,8.7817,{"v":1.61e-18,"d":"1.61E-18"},{"v":7.78e-17,"d":"7.78E-17"},"full_name=Rubisco small subunit 3B. Ribulose bisphosphate carboxylase (small chain) family protein. Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410). Functions to yield sufficient Rubisco content for leaf photosynthetic capacity.","AT5G04760","DIV2",245.76,1.7033,0.23411,7.2755,{"v":3.45e-13,"d":"3.45E-13"},{"v":1.63e-11,"d":"1.63E-11"},"Duplicated homeodomain-like superfamily protein."]
["AT3G01570",null,3078.8,-2.865,0.31369,-9.1333,{"v":6.65e-20,"d":"6.65E-20"},{"v":3.21e-18,"d":"3.21E-18"},"Oleosin family protein.","AT5G48850","ATSDI1",1030.2,-1.5087,0.17205,-8.7691,{"v":1.8e-18,"d":"1.80E-18"},8.68E-17,"full_name=SULPHUR DEFICIENCY-INDUCED 1. Tetratricopeptide repeat (TPR)-like superfamily protein. homologous to the wheat sulphate deficiency-induced gene sdi1. Expression in root and leaf is induced by sulfur starvation. Knockout mutants retained higher root and leaf sulfate concentrations, indicating a role in regulation of stored sulfate pools.","AT2G19590","ACO1",146.19,-2.367,0.3254,-7.2743,{"v":3.48e-13,"d":"3.48E-13"},1.64E-11,"full_name=ACC oxidase 1. ACC oxidase 1. encodes a protein whose sequence is similar to 1-aminocyclopropane-1-carboxylate oxidase"]
["AT5G63530","FP3",1737.1,-1.3511,0.14793,-9.1331,{"v":6.66e-20,"d":"6.66E-20"},{"v":3.21e-18,"d":"3.21E-18"},"full_name=farnesylated protein 3. farnesylated protein 3. Farnesylated protein that binds metals.","AT5G50600","HSD1",292.66,-2.8827,0.32913,-8.7585,{"v":1.98e-18,"d":"1.98E-18"},{"v":9.51e-17,"d":"9.51E-17"},"full_name=hydroxysteroid dehydrogenase 1. hydroxysteroid dehydrogenase 1. Encodes a hydroxysteroid dehydrogenase shown to act as a NADP+-dependent 11&beta;-,17&beta;-hydroxysteroid dehydrogenase/17&beta;-ketosteroid reductase called HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination. To date, the endogenous substrates of this enzyme are not known.","AT3G07320",null,385.28,-1.5617,0.21472,-7.273,{"v":3.52e-13,"d":"3.52E-13"},1.66E-11,"O-Glycosyl hydrolases family 17 protein."]
["AT3G05590","RPL18",8338.8,0.71154,0.077925,9.1311,6.78E-20,3.26E-18,"full_name=ribosomal protein L18. ribosomal protein L18. Encodes cytoplasmic ribosomal protein L18.","AT5G50700","HSD1",292.88,-2.8839,0.32943,-8.7541,{"v":2.06e-18,"d":"2.06E-18"},{"v":9.86e-17,"d":"9.86E-17"},"full_name=hydroxysteroid dehydrogenase 1. hydroxysteroid dehydrogenase 1. Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination.","AT5G59820","RHL41",90.159,2.9392,0.40509,7.2557,{"v":4e-13,"d":"4.00E-13"},{"v":1.88e-11,"d":"1.88E-11"},"full_name=RESPONSIVE TO HIGH LIGHT 41. C2H2-type zinc finger family protein. Encodes a zinc finger protein involved in high light and cold acclimation. Overexpression of this putative transcription factor increases the expression level of 9 cold-responsive genes and represses the expression level of 15 cold-responsive genes, including CBF genes. Also, lines overexpressing this gene exhibits a small but reproducible increase in freeze tolerance. Because of the repression of the CBF genes by the overexpression of this gene, the authors speculate that this gene may be involved in negative regulatory circuit of the CBF pathway."]
["AT4G18920",null,153.68,-3.0401,0.33298,-9.1301,{"v":6.85e-20,"d":"6.85E-20"},{"v":3.29e-18,"d":"3.29E-18"},"histone acetyltransferase (DUF1264).","AT5G54300",null,210.4,-2.0906,0.23894,-8.7494,{"v":2.15e-18,"d":"2.15E-18"},1.03E-16,"cotton fiber-like protein (DUF761).","AT3G12710",null,299.83,2.1679,0.29882,7.2549,4.02E-13,{"v":1.88e-11,"d":"1.88E-11"},"DNA glycosylase superfamily protein."]
["AT4G04460","PASPA3",255.33,-2.3846,0.26123,-9.1284,{"v":6.95e-20,"d":"6.95E-20"},3.33E-18,"Saposin-like aspartyl protease family protein.","AT2G34300",null,557.69,1.4218,0.16251,8.7489,{"v":2.15e-18,"d":"2.15E-18"},1.03E-16,"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT2G36220",null,174.21,2.282,0.31485,7.2478,{"v":4.23e-13,"d":"4.23E-13"},{"v":1.98e-11,"d":"1.98E-11"},"hypothetical protein."]
["AT3G51600","LTP5",697.87,-1.2794,0.14016,-9.1281,{"v":6.97e-20,"d":"6.97E-20"},3.33E-18,"full_name=lipid transfer protein 5. lipid transfer protein 5. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.","AT3G12610","DRT100",411.36,1.51,0.17269,8.744,2.25E-18,1.07E-16,"full_name=DNA-DAMAGE REPAIR/TOLERATION 100. Leucine-rich repeat (LRR) family protein. Plays role in DNA-damage repair/toleration. Partially complements RecA- phenotypes.","AT2G28400",null,181.78,2.0439,0.28215,7.2441,{"v":4.35e-13,"d":"4.35E-13"},2.03E-11,"senescence regulator (Protein of unknown function, DUF584)."]
["AT1G33240","GTL1",917.98,-1.3079,0.14334,-9.1244,{"v":7.22e-20,"d":"7.22E-20"},{"v":3.44e-18,"d":"3.44E-18"},"full_name=GT-2-like 1. GT-2-like 1. Encodes a plant transcriptional activator that contains two separate, but similar, trihelix DNA-binding domains, similar to GT-2. Gene is expressed in all aerial parts of the plant, with higher level of expression in siliques. At-GTL2 was thought to be a duplicated copy of this gene but is likely to be a cloning artefact, the result of a chimeric clone. Regulates ploidy-dependent cell growth in trichome.","AT4G29270",null,384.99,1.511,0.173,8.7342,{"v":2.45e-18,"d":"2.45E-18"},{"v":1.16e-16,"d":"1.16E-16"},"HAD superfamily, subfamily IIIB acid phosphatase.","AT2G33380","RD20",56.376,4.6052,0.63683,7.2314,{"v":4.78e-13,"d":"4.78E-13"},{"v":2.22e-11,"d":"2.22E-11"},"full_name=RESPONSIVE TO DESSICATION 20. Caleosin-related family protein. Encodes a calcium binding protein whose mRNA is induced upon treatment with NaCl, ABA and in response to dessication. mRNA expression under drought conditions is apparent particularly in leaves and flowers. Isoform of caleosin with a role as a peroxygenase involved in oxylipin metabolism during biotic and abiotic stress. Involved in the production of 2-hydroxy-octadecatrienoic acid. The peroxygenase has a narrow substrate specificity thus acting as a fatty acid hydroperoxide reductase in vivo."]
["AT5G44700","GSO2",1128.3,-1.1695,0.12828,-9.1162,{"v":7.78e-20,"d":"7.78E-20"},{"v":3.7e-18,"d":"3.70E-18"},"full_name=GASSHO 2. Leucine-rich repeat transmembrane protein kinase. Encodes GASSHO2 (GSO2), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO2 and a homolog GSO1 (At4g20140) are required for the formation of a normal epidermal surface during embryogenesis.","AT1G02640","BXL2",487.13,1.5831,0.18143,8.7257,{"v":2.65e-18,"d":"2.65E-18"},{"v":1.25e-16,"d":"1.25E-16"},"full_name=beta-xylosidase 2. beta-xylosidase 2. encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members.","AT1G53240","mMDH1",2086.2,-0.92587,0.12806,-7.2302,{"v":4.82e-13,"d":"4.82E-13"},{"v":2.24e-11,"d":"2.24E-11"},"full_name=mitochondrial malate dehydrogenase 1. Lactate/malate dehydrogenase family protein. mMDH1 encodes a mitochrondrial malate dehydrogenase. It is expressed at higher levels than the other mitochrondrial isoform mMDH2 (At3G15020) according to transcript and proteomic analyses."]
["AT2G23910",null,312.05,1.7805,0.19555,9.1054,{"v":8.6e-20,"d":"8.60E-20"},{"v":4.08e-18,"d":"4.08E-18"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT5G51070","ERD1",945.01,-1.1661,0.13365,-8.7246,2.67E-18,1.26E-16,"full_name=EARLY RESPONSIVE TO DEHYDRATION 1. Clp ATPase. ATP-dependent Clp protease regulatory subunit","AT5G11740","AGP15",1629.3,1.1097,0.15363,7.2234,{"v":5.07e-13,"d":"5.07E-13"},{"v":2.34e-11,"d":"2.34E-11"},"full_name=arabinogalactan protein 15. arabinogalactan protein 15. Encodes arabinogalactan protein (AGP15)."]
["AT4G27460","CBSX5",547.53,-1.6322,0.17942,-9.0973,{"v":9.26e-20,"d":"9.26E-20"},{"v":4.38e-18,"d":"4.38E-18"},"full_name=CBS domain containing protein 5. Cystathionine beta-synthase (CBS) family protein.","AT5G20250","DIN10",452.05,2.8932,0.33214,8.7108,{"v":3.02e-18,"d":"3.02E-18"},{"v":1.42e-16,"d":"1.42E-16"},"full_name=DARK INDUCIBLE 10. Raffinose synthase family protein. encodes a member of glycosyl hydrolase family 36. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.","AT2G24180","CYP71B6",642.52,1.1691,0.16185,7.2233,{"v":5.07e-13,"d":"5.07E-13"},{"v":2.34e-11,"d":"2.34E-11"},"full_name=cytochrome p450 71b6. cytochrome p450 71b6. Encodes a cytochrome P450 monooxygenase that converts indole-3-acetonitrile to indole-3-aldehyde / indole-3-carboxylic acid and cyanide."]
["AT5G24950","CYP71A15",781.14,-1.5629,0.1718,-9.097,{"v":9.29e-20,"d":"9.29E-20"},{"v":4.38e-18,"d":"4.38E-18"},"full_name=cytochrome P450, family 71, subfamily A, polypeptide 15. cytochrome P450, family 71, subfamily A, polypeptide 15. putative cytochrome P450","AT2G32430",null,114.98,2.7042,0.31046,8.7102,{"v":3.03e-18,"d":"3.03E-18"},{"v":1.43e-16,"d":"1.43E-16"},"Galactosyltransferase family protein.","AT5G57090","EIR1",450.93,-1.4607,0.20236,-7.2184,{"v":5.26e-13,"d":"5.26E-13"},{"v":2.42e-11,"d":"2.42E-11"},"full_name=ETHYLENE INSENSITIVE ROOT 1. Auxin efflux carrier family protein. Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation resulted in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Protein turnover is affected by the proteasome and by endosomal cycling. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. Membrane sterol composition is essential for the acquisition of PIN2 polarity."]
["AT3G03920",null,1814.8,0.90644,0.09965,9.0962,{"v":9.35e-20,"d":"9.35E-20"},{"v":4.4e-18,"d":"4.40E-18"},"H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein.","AT1G32060","PRK",1148.4,1.2718,0.14609,8.7058,{"v":3.15e-18,"d":"3.15E-18"},{"v":1.48e-16,"d":"1.48E-16"},"full_name=phosphoribulokinase. phosphoribulokinase.","AT3G03310","LCAT3",280.08,1.6413,0.22766,7.2096,{"v":5.61e-13,"d":"5.61E-13"},{"v":2.58e-11,"d":"2.58E-11"},"full_name=lecithin:cholesterol acyltransferase 3. lecithin:cholesterol acyltransferase 3."]
["AT1G43670","FBP",3965.8,1.0246,0.11268,9.093,{"v":9.63e-20,"d":"9.63E-20"},{"v":4.52e-18,"d":"4.52E-18"},"full_name=fructose-1,6-bisphosphatase. Inositol monophosphatase family protein. Encodes a fructose-1,6-bisphosphatase. This enzyme, in addition to catalyzing the formation of fructose-6-phosphate for sucrose biosynthesis, appears to play a role in fructose-mediated signaling that is independent of its enzymatic activity. atcfbp-1/fins1 mutants have reduced photosynthetic rates, elevated levels of starch and reduced levels of sucrose during the day. Although the protein is expected to be cytosolic, a GFP-tagged version localizes to the cytoplasm and the nucleus.","AT1G76100","PETE1",225.53,1.9452,0.22354,8.7017,{"v":3.27e-18,"d":"3.27E-18"},1.53E-16,"full_name=plastocyanin 1. plastocyanin 1. One of two Arabidopsis plastocyanin genes. Expressed at 1/10th level of PETE2. Does not respond to increased copper levels and is thought to be the isoform that participates in electron transport under copper-limiting conditions. Mutation of this gene does not have obvious effect on photosynthesis.","AT5G58950",null,1672.6,1.006,0.13966,7.2026,{"v":5.91e-13,"d":"5.91E-13"},{"v":2.71e-11,"d":"2.71E-11"},"Protein kinase superfamily protein."]
["AT3G60320","NRG2",1135.9,-1.0125,0.11136,-9.0921,{"v":9.71e-20,"d":"9.71E-20"},{"v":4.55e-18,"d":"4.55E-18"},"bZIP domain class transcription factor (DUF630 and DUF632).","AT1G03630","POR C",937.76,1.2681,0.1458,8.6974,{"v":3.4E-18,"d":"3.40E-18"},1.58E-16,"full_name=protochlorophyllide oxidoreductase C. protochlorophyllide oxidoreductase C. Encodes for a protein with protochlorophyllide oxidoreductase activity. The enzyme is NADPH- and light-dependent.","AT5G03350","SAI-LLP1",417.62,-1.359,0.18879,-7.1985,{"v":6.09e-13,"d":"6.09E-13"},2.78E-11,"Legume lectin family protein."]
["AT5G07680","NAC080",645.62,-1.4238,0.15664,-9.0897,{"v":9.93e-20,"d":"9.93E-20"},4.64E-18,"full_name=NAC domain containing protein 80. NAC domain containing protein 80.","AT1G31850",null,1429.9,0.97131,0.11185,8.6843,{"v":3.81e-18,"d":"3.81E-18"},{"v":1.77e-16,"d":"1.77E-16"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT3G14240",null,375.11,-1.4143,0.19651,-7.1973,{"v":6.14e-13,"d":"6.14E-13"},{"v":2.8E-11,"d":"2.80E-11"},"Subtilase family protein."]
["AT5G25280",null,1223.9,1.0951,0.12053,9.0855,1.03E-19,{"v":4.81e-18,"d":"4.81E-18"},"serine-rich protein-like protein.","AT4G26760","MAP65-2",689.23,1.2005,0.13825,8.6841,{"v":3.82e-18,"d":"3.82E-18"},{"v":1.77e-16,"d":"1.77E-16"},"full_name=microtubule-associated protein 65-2. microtubule-associated protein 65-2.","AT2G46220",null,781.59,1.0972,0.1526,7.1896,{"v":6.5e-13,"d":"6.50E-13"},{"v":2.95e-11,"d":"2.95E-11"},"DUF2358 family protein (DUF2358)."]
["AT1G60710","ATB2",3022,-0.90883,0.10008,-9.0809,1.08E-19,{"v":5e-18,"d":"5.00E-18"},"NAD(P)-linked oxidoreductase superfamily protein. Encodes ATB2.","AT4G22010","sks4",598.37,1.3866,0.15993,8.6697,{"v":4.33e-18,"d":"4.33E-18"},{"v":2.01e-16,"d":"2.01E-16"},"full_name=SKU5 similar 4. SKU5 similar 4.","AT1G67360","LDAP1",543.59,1.762,0.24509,7.1892,{"v":6.52e-13,"d":"6.52E-13"},2.96E-11,"Rubber elongation factor protein (REF)."]
["AT5G40420","OLEO2",5934.3,-2.8222,0.31086,-9.0787,{"v":1.1e-19,"d":"1.10E-19"},{"v":5.1e-18,"d":"5.10E-18"},"full_name=oleosin 2. oleosin 2. Encodes oleosin2, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.","AT1G07890","APX1",2121.9,0.9081,0.10476,8.6686,{"v":4.37e-18,"d":"4.37E-18"},2.02E-16,"full_name=ascorbate peroxidase 1. ascorbate peroxidase 1. Encodes a cytosolic ascorbate peroxidase APX1. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.","AT1G25275",null,353.31,1.632,0.22727,7.181,{"v":6.92e-13,"d":"6.92E-13"},{"v":3.13e-11,"d":"3.13E-11"},"thionin-like protein."]
["AT3G14360","ATOBL1",4345.6,-1.0767,0.11864,-9.0752,1.14E-19,{"v":5.25e-18,"d":"5.25E-18"},"alpha/beta-Hydrolases superfamily protein.","AT5G40370","GRXC2",1056.8,-1.1362,0.13132,-8.6519,5.06E-18,{"v":2.33e-16,"d":"2.33E-16"},"full_name=glutaredoxin C2. Glutaredoxin family protein.","AT3G18080","BGLU44",3089.3,-1.0315,0.14364,-7.1808,{"v":6.93e-13,"d":"6.93E-13"},{"v":3.13e-11,"d":"3.13E-11"},"full_name=B-S glucosidase 44. B-S glucosidase 44."]
["AT3G10010","DML2",626.49,-1.5642,0.17244,-9.0708,{"v":1.18e-19,"d":"1.18E-19"},{"v":5.45e-18,"d":"5.45E-18"},"full_name=demeter-like 2. demeter-like 2. Encodes a protein with DNA glycosylase activity that is involved in maintaining methylation marks.","AT5G15650","RGP2",3710.1,1.382,0.16006,8.6346,{"v":5.89e-18,"d":"5.89E-18"},{"v":2.71e-16,"d":"2.71E-16"},"full_name=reversibly glycosylated polypeptide 2. reversibly glycosylated polypeptide 2. RGP2 is a UDP-arabinose mutase that catalyzes the interconversion between the pyranose and furanose forms of UDP-L-arabinose. It appears to be required for proper cell wall formation. rgp1(at3g02230)/rgp2 double mutants have a male gametophyte lethal phenotype. RGP2 fusion proteins can be found in the cytosol and peripherally associated with the Golgi apparatus. RGP2 was originally identified as Reversibly Glycosylated Polypeptide-2. Constitutive expression in tobacco impairs plant development and virus spread.","AT1G23710",null,188.75,1.869,0.26036,7.1786,{"v":7.04e-13,"d":"7.04E-13"},{"v":3.17e-11,"d":"3.17E-11"},"hypothetical protein (DUF1645)."]
["AT4G12600",null,2289.2,0.83617,0.092231,9.066,{"v":1.23e-19,"d":"1.23E-19"},{"v":5.68e-18,"d":"5.68E-18"},"Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein.","AT1G70280",null,344.56,1.7104,0.19809,8.6344,{"v":5.9e-18,"d":"5.90E-18"},{"v":2.71e-16,"d":"2.71E-16"},"NHL domain-containing protein.","AT4G34100","CER9",1086.7,1.0328,0.14389,7.1777,{"v":7.09e-13,"d":"7.09E-13"},{"v":3.19e-11,"d":"3.19E-11"},"full_name=ECERIFERUM 9. RING/U-box superfamily protein. Encodes a protein involved in cuticular wax biosynthesis. Lines carrying a recessive mutation in this locus have reduced chain-length distribution, weakly glaucous stem surface, and has reduced fertility in early flowers, non-spreading floret, downward cupped leaves, leaf waxes nearly pure C24 and C26 acid."]
["AT1G59870","PEN3",134.96,2.9523,0.32568,9.0651,{"v":1.25e-19,"d":"1.25E-19"},{"v":5.72e-18,"d":"5.72E-18"},"full_name=PENETRATION 3. ABC-2 and Plant PDR ABC-type transporter family protein. ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acid%E2%80%93dependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance.","AT4G36700",null,242.47,-3.3943,0.3932,-8.6325,{"v":6e-18,"d":"6.00E-18"},{"v":2.74e-16,"d":"2.74E-16"},"RmlC-like cupins superfamily protein.","AT5G13200","GER5",56.896,4.279,0.59652,7.1733,{"v":7.32e-13,"d":"7.32E-13"},{"v":3.28e-11,"d":"3.28E-11"},"GRAM domain family protein. Encodes a protein with unknown function that is involved in hormone mediated regulation of seed germination/dormancy."]
["AT2G43060","IBH1",225.53,-2.3922,0.26391,-9.0647,{"v":1.25e-19,"d":"1.25E-19"},{"v":5.72e-18,"d":"5.72E-18"},"full_name=ILI1 binding bHLH 1. ILI1 binding bHLH 1.","AT3G48340","CEP2",501.03,6.4671,0.74957,8.6278,{"v":6.26e-18,"d":"6.26E-18"},2.85E-16,"full_name=cysteine endopeptidase 2. Cysteine proteinases superfamily protein.","AT4G24570","DIC2",95.74,2.7137,0.3785,7.1696,{"v":7.52e-13,"d":"7.52E-13"},{"v":3.36e-11,"d":"3.36E-11"},"full_name=dicarboxylate carrier 2. dicarboxylate carrier 2. Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470)."]
["AT3G29810","COBL2",310.5,-1.7816,0.19656,-9.0637,{"v":1.26e-19,"d":"1.26E-19"},{"v":5.76e-18,"d":"5.76E-18"},"full_name=COBRA-like protein 2 precursor. COBRA-like protein 2 precursor.","AT5G51040","SDHAF2",1019.5,-1.1025,0.12848,-8.5814,{"v":9.38e-18,"d":"9.38E-18"},{"v":4.27e-16,"d":"4.27E-16"},"full_name=Succinate dehydrogenase assembly factor 2. succinate dehydrogenase assembly factor. Encodes succinate dehydrogenase assembly factor 2 (SDHAF2), a low abundance mitochondrial protein needed for assembly and activity of mitochondrial complex II and for normal root elongation.","AT3G14310","PME3",507.02,-1.2419,0.17328,-7.1672,{"v":7.66e-13,"d":"7.66E-13"},{"v":3.42e-11,"d":"3.42E-11"},"full_name=pectin methylesterase 3. pectin methylesterase 3. encodes a pectin methylesterase, targeted by a cellulose binding protein (CBP) from the parasitic nematode Heterodera schachtii during parasitism."]
["AT1G20390",null,1362.4,1.4992,0.16556,9.0556,{"v":1.36e-19,"d":"1.36E-19"},{"v":6.19e-18,"d":"6.19E-18"},"transposable_element_gene.","AT3G27200",null,96.339,-3.6685,0.4283,-8.5652,1.08E-17,{"v":4.9e-16,"d":"4.90E-16"},"Cupredoxin superfamily protein.","AT4G18700","CIPK12",1081.1,1.0284,0.14354,7.1648,{"v":7.79e-13,"d":"7.79E-13"},3.47E-11,"full_name=CBL-interacting protein kinase 12. CBL-interacting protein kinase 12. Encodes CBL-interacting protein kinase 12 (CIPK12)."]
["AT5G42650","AOS",2653.7,0.87632,0.096794,9.0534,{"v":1.39e-19,"d":"1.39E-19"},{"v":6.3e-18,"d":"6.30E-18"},"full_name=allene oxide synthase. allene oxide synthase. Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.","AT1G17810","BETA-TIP",140.39,-2.8237,0.33061,-8.5411,1.33E-17,{"v":6.02e-16,"d":"6.02E-16"},"full_name=beta-tonoplast intrinsic protein. beta-tonoplast intrinsic protein. beta-tonoplast intrinsic protein (beta-TIP) mRNA, complete","AT5G20250","DIN10",363.78,-2.2109,0.30875,-7.1607,{"v":8.02e-13,"d":"8.02E-13"},{"v":3.56e-11,"d":"3.56E-11"},"full_name=DARK INDUCIBLE 10. Raffinose synthase family protein. encodes a member of glycosyl hydrolase family 36. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell."]
["AT4G37520",null,389.99,-2.2976,0.2538,-9.053,{"v":1.39e-19,"d":"1.39E-19"},{"v":6.31e-18,"d":"6.31E-18"},"Peroxidase superfamily protein.","AT5G08570",null,1764.3,-0.94273,0.1105,-8.5317,1.44E-17,{"v":6.52e-16,"d":"6.52E-16"},"Pyruvate kinase family protein.","AT3G04290","LTL1",136.61,-2.3245,0.32482,-7.1564,{"v":8.28e-13,"d":"8.28E-13"},3.67E-11,"full_name=Li-tolerant lipase 1. Li-tolerant lipase 1."]
["AT5G02050",null,1201.6,1.0062,0.11115,9.0524,{"v":1.4E-19,"d":"1.40E-19"},{"v":6.33e-18,"d":"6.33E-18"},"Mitochondrial glycoprotein family protein.","AT5G04530","KCS19",223.91,2.3386,0.27428,8.5264,{"v":1.51e-17,"d":"1.51E-17"},{"v":6.8e-16,"d":"6.80E-16"},"full_name=3-ketoacyl-CoA synthase 19. 3-ketoacyl-CoA synthase 19. Encodes KCS19, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT3G56880",null,417.47,1.3362,0.18688,7.15,{"v":8.68e-13,"d":"8.68E-13"},3.83E-11,"VQ motif-containing protein."]
["AT3G14230","RAP2.2",4754,0.8976,0.099174,9.0508,1.42E-19,{"v":6.41e-18,"d":"6.41E-18"},"full_name=related to AP2 2. related to AP2 2. encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.2). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.","AT2G45050","GATA2",320.64,2.0341,0.2386,8.5252,1.53E-17,6.86E-16,"full_name=GATA transcription factor 2. GATA transcription factor 2. Encodes a member of the GATA factor family of zinc finger transcription factors. A positive regulator of photomorphogenesis.","AT3G44290","NAC060",257.62,1.5772,0.22068,7.1469,{"v":8.88e-13,"d":"8.88E-13"},{"v":3.91e-11,"d":"3.91E-11"},"full_name=NAC domain containing protein 60. NAC domain containing protein 60."]
["AT5G09620",null,1659,-0.93585,0.1034,-9.0504,1.42E-19,{"v":6.41e-18,"d":"6.41E-18"},"Octicosapeptide/Phox/Bem1p family protein.","AT4G23650","CDPK6",828.25,1.1288,0.13246,8.5215,{"v":1.58e-17,"d":"1.58E-17"},{"v":7.07e-16,"d":"7.07E-16"},"full_name=calcium-dependent protein kinase 6. calcium-dependent protein kinase 6. Encodes calcium dependent protein kinase 3 (CPK3), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK3 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. CPK6 is also a member of the Arabidopsis CDPK family.","AT3G23150","ETR2",245.15,-2.3822,0.33351,-7.1426,{"v":9.16e-13,"d":"9.16E-13"},{"v":4.03e-11,"d":"4.03E-11"},"full_name=ethylene response 2. Signal transduction histidine kinase, hybrid-type, ethylene sensor. Involved in ethylene perception in Arabidopsis"]
["AT3G52840","BGAL2",81.677,-4.6646,0.51613,-9.0376,{"v":1.6e-19,"d":"1.60E-19"},{"v":7.2e-18,"d":"7.20E-18"},"full_name=beta-galactosidase 2. beta-galactosidase 2.","AT4G31320","SAUR37",159.8,2.2336,0.26233,8.5147,{"v":1.67e-17,"d":"1.67E-17"},{"v":7.48e-16,"d":"7.48E-16"},"SAUR-like auxin-responsive protein family.","AT5G67480","BT4",991.84,1.1638,0.16303,7.1383,{"v":9.45e-13,"d":"9.45E-13"},{"v":4.14e-11,"d":"4.14E-11"},"full_name=BTB and TAZ domain protein 4. BTB and TAZ domain protein 4. BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves."]
["AT4G39200",null,6991,0.70311,0.077877,9.0284,1.74E-19,{"v":7.81e-18,"d":"7.81E-18"},"Ribosomal protein S25 family protein.","AT2G45510","CYP704A2",891.72,-1.2423,0.14606,-8.5056,{"v":1.81e-17,"d":"1.81E-17"},8.07E-16,"full_name=cytochrome P450, family 704, subfamily A, polypeptide 2. cytochrome P450, family 704, subfamily A, polypeptide 2. member of CYP704A","AT1G75390","bZIP44",391.26,-1.7729,0.24839,-7.1374,{"v":9.51e-13,"d":"9.51E-13"},{"v":4.16e-11,"d":"4.16E-11"},"full_name=basic leucine-zipper 44. basic leucine-zipper 44."]
["AT4G24750",null,743.67,1.1908,0.13191,9.0274,{"v":1.76e-19,"d":"1.76E-19"},{"v":7.86e-18,"d":"7.86E-18"},"Rhodanese/Cell cycle control phosphatase superfamily protein.","AT4G38970","FBA2",2853,1.1606,0.13646,8.505,{"v":1.82e-17,"d":"1.82E-17"},{"v":8.09e-16,"d":"8.09E-16"},"full_name=fructose-bisphosphate aldolase 2. fructose-bisphosphate aldolase 2. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT2G19900","NADP-ME1",868.98,3.3142,0.46463,7.133,{"v":9.82e-13,"d":"9.82E-13"},{"v":4.29e-11,"d":"4.29E-11"},"full_name=NADP-malic enzyme 1. NADP-malic enzyme 1. The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals. The enzyme is active in vitro and appears to function as a homohexamer or homooctamer. It is believed to be a cytosolic protein."]
["AT1G16860","SHOU4L",679.34,-1.2187,0.1353,-9.0071,{"v":2.12e-19,"d":"2.12E-19"},{"v":9.44e-18,"d":"9.44E-18"},"Ubiquitin-specific protease family C19-related protein.","AT3G46230","HSP17.4",118.06,-3.3586,0.39546,-8.4929,2.02E-17,{"v":8.96e-16,"d":"8.96E-16"},"full_name=heat shock protein 17.4. heat shock protein 17.4. member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds","AT1G07480",null,477.77,1.4417,0.20233,7.1255,1.04E-12,{"v":4.51e-11,"d":"4.51E-11"},"Transcription factor IIA, alpha/beta subunit."]
["AT2G38900",null,111.06,-3.1297,0.34876,-8.9736,{"v":2.87e-19,"d":"2.87E-19"},1.28E-17,"Serine protease inhibitor, potato inhibitor I-type family protein. Predicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860.","AT3G57330","ACA11",109.54,2.6956,0.31742,8.4923,{"v":2.03e-17,"d":"2.03E-17"},8.98E-16,"full_name=autoinhibited Ca2+-ATPase 11. autoinhibited Ca2+-ATPase 11. Lesion mimic phenotype when mutation in the gene is combined with a mutation in ACA4. Lesion mimic phenotype of double knockout can be suppressed by nutritional supplements that increase anion levels (e.g. 15 mM Nitrate, Chloride, or Phosphate)","AT4G33950","OST1",376.32,1.3926,0.19575,7.1142,1.13E-12,4.89E-11,"full_name=OPEN STOMATA 1. Protein kinase superfamily protein. Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network."]
["AT1G08700","PS1",899.28,-1.0859,0.12109,-8.9679,{"v":3.02e-19,"d":"3.02E-19"},1.34E-17,"full_name=Presenilin-1. Presenilin-1. Encodes a protein similar to animal presenilin whose expression is increased in response to potassium (K+) deprivation. Located in intracellular membrane compartments.","AT3G18890","Tic62",136.35,2.3959,0.28222,8.4893,2.08E-17,{"v":9.19e-16,"d":"9.19E-16"},"full_name=translocon at the inner envelope membrane of chloroplasts 62. NAD(P)-binding Rossmann-fold superfamily protein.","AT3G46940","DUT1",179.66,-1.8651,0.26243,-7.107,1.19E-12,{"v":5.14e-11,"d":"5.14E-11"},"full_name=DUTP-PYROPHOSPHATASE-LIKE 1. DUTP-PYROPHOSPHATASE-LIKE 1."]
["AT4G19020","CMT2",338.83,-1.7019,0.18998,-8.9585,{"v":3.29e-19,"d":"3.29E-19"},{"v":1.46e-17,"d":"1.46E-17"},"full_name=chromomethylase 2. chromomethylase 2. Encodes a plant DNA methyltransferase that methylates mainly cytosines in CHH (H = any base but G) contexts. It is involved in heat tolerance.","AT3G21790",null,868.21,-1.1821,0.13926,-8.4886,{"v":2.09e-17,"d":"2.09E-17"},{"v":9.23e-16,"d":"9.23E-16"},"UDP-Glycosyltransferase superfamily protein.","AT1G60140","TPS10",364.69,1.369,0.19271,7.1039,{"v":1.21e-12,"d":"1.21E-12"},5.25E-11,"full_name=trehalose phosphate synthase. trehalose phosphate synthase. Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain."]
["AT1G19570","DHAR1",18036,-0.70048,0.07824,-8.9529,{"v":3.46e-19,"d":"3.46E-19"},1.53E-17,"full_name=dehydroascorbate reductase. dehydroascorbate reductase. Encodes a member of the dehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica.","AT1G69870","NRT1.7",469.02,-2.1732,0.25674,-8.4644,{"v":2.58e-17,"d":"2.58E-17"},1.13E-15,"full_name=nitrate transporter 1.7. nitrate transporter 1.7. Encodes a low affinity nitrate transporter NRT1.7. Expressed in phloem. Responsible for source-to-sink remobilization of nitrate.","AT5G62020","HSFB2A",245.97,1.8401,0.25907,7.1027,{"v":1.22e-12,"d":"1.22E-12"},{"v":5.28e-11,"d":"5.28E-11"},"full_name=heat shock transcription factor B2A. heat shock transcription factor B2A. member of Heat Stress Transcription Factor (Hsf) family"]
["AT2G27710",null,3517.7,0.81151,0.090742,8.943,{"v":3.79e-19,"d":"3.79E-19"},{"v":1.67e-17,"d":"1.67E-17"},"60S acidic ribosomal protein family.","AT5G03760","ATCSLA09",162.9,3.0625,0.36243,8.45,{"v":2.91e-17,"d":"2.91E-17"},{"v":1.28e-15,"d":"1.28E-15"},"Nucleotide-diphospho-sugar transferases superfamily protein. encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.","AT1G75800",null,2093.8,1.0347,0.1458,7.0968,1.28E-12,{"v":5.49e-11,"d":"5.49E-11"},"Pathogenesis-related thaumatin superfamily protein."]
["AT1G02640","BXL2",192.18,2.2708,0.25398,8.9409,{"v":3.86e-19,"d":"3.86E-19"},{"v":1.7e-17,"d":"1.70E-17"},"full_name=beta-xylosidase 2. beta-xylosidase 2. encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members.","AT3G16400","NSP1",5744,0.95538,0.11312,8.4455,{"v":3.03e-17,"d":"3.03E-17"},{"v":1.33e-15,"d":"1.33E-15"},"full_name=nitrile specifier protein 1. nitrile specifier protein 1. Encodes a nitrile-specifier protein NSP1 responsible for constitutive and herbivore-induced simple nitrile formation in rosette leaves. NSP1 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation.","AT1G73920",null,327.48,1.5386,0.21689,7.0939,{"v":1.3e-12,"d":"1.30E-12"},{"v":5.6E-11,"d":"5.60E-11"},"alpha/beta-Hydrolases superfamily protein."]
["AT3G22550",null,299.03,-1.7458,0.19529,-8.9393,{"v":3.92e-19,"d":"3.92E-19"},{"v":1.72e-17,"d":"1.72E-17"},"NAD(P)H-quinone oxidoreductase subunit, putative (DUF581).","AT4G08870","ARGAH2",936.14,-1.236,0.14662,-8.4297,{"v":3.46e-17,"d":"3.46E-17"},{"v":1.51e-15,"d":"1.51E-15"},"full_name=arginine amidohydrolase 2. Arginase/deacetylase superfamily protein. Encodes one of the two arginase in the genome. Gene expression is enhanced by methyl jasmonate treatment. It is involved in the defense response to B.cinerea.","AT5G27330",null,185.01,-2.039,0.28774,-7.0863,1.38E-12,{"v":5.9e-11,"d":"5.90E-11"},"Prefoldin chaperone subunit family protein."]
["AT1G27950","LTPG1",4545.3,-0.81378,0.091038,-8.9389,3.93E-19,{"v":1.72e-17,"d":"1.72E-17"},"full_name=glycosylphosphatidylinositol-anchored lipid protein transfer 1. glycosylphosphatidylinositol-anchored lipid protein transfer 1. Encodes LTPG1, a lipid transfer protein with a predicted GPI (glycosylphosphatidylinositol)-anchor domain. Localized in the plasma membrane. Disruption of the LTPG1 gene causes alterations of cuticular lipid composition, but no significant changes on total wax and cutin monomer loads are seen.","AT3G59970","MTHFR1",1708.8,0.99632,0.11842,8.4134,{"v":3.98e-17,"d":"3.98E-17"},{"v":1.74e-15,"d":"1.74E-15"},"full_name=methylenetetrahydrofolate reductase 1. methylenetetrahydrofolate reductase 1. methylenetetrahydrofolate reductase MTHFR1 mRNA, complete","AT1G21670",null,227.12,1.8231,0.25753,7.0792,{"v":1.45e-12,"d":"1.45E-12"},{"v":6.2e-11,"d":"6.20E-11"},"DPP6 amino-terminal domain protein."]
["AT2G19450","TAG1",1043.9,-1.0234,0.11475,-8.9182,{"v":4.74e-19,"d":"4.74E-19"},{"v":2.07e-17,"d":"2.07E-17"},"full_name=TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1. membrane bound O-acyl transferase (MBOAT) family protein. Encodes Acyl-CoA:diacylglycerol acyltransferase (DGAT) catalyzes the final step of the triacylglycerol synthesis pathway. An insertion mutation in the TAG1 gene results in altered lipid phenotype. Role in senescence and seed development. Its preferred substrate is linolenoyl-CoA (C18:3-CoA).","AT5G17700",null,554.86,-1.6435,0.19572,-8.3974,{"v":4.57e-17,"d":"4.57E-17"},1.99E-15,"MATE efflux family protein.","AT1G27760","SAT32",593.55,1.1687,0.16545,7.064,1.62E-12,{"v":6.9e-11,"d":"6.90E-11"},"full_name=SALT-TOLERANCE 32. interferon-related developmental regulator family protein / IFRD protein family. Encodes a protein with similarity to human interferon-related developmental regulator (IFRD)that is involved in salt tolerance. Loss of function mutations are hypersensitive to salt stress and have reduced fertility. SAT32 is found in the cytoplasm but appears to translocate to the nucleus when plants are subject to salt stress."]
["AT1G20090","ROP2",322.59,-1.7276,0.19379,-8.9145,{"v":4.9e-19,"d":"4.90E-19"},{"v":2.13e-17,"d":"2.13E-17"},"full_name=RHO-related protein from plants 2. RHO-related protein from plants 2. Member of the Rho GTPase family. Functions to organize the microtubular cytoskeleton in combination with RIC1 and RIC4. These interactions affect pavement cell morphogenesis and pollen tube growth. ROP2 expression is stimulated by brassinosteroid treatment. Inhibit light-induced stomatal opening.","AT1G47620","CYP96A8",92.299,2.9354,0.34987,8.3901,{"v":4.86e-17,"d":"4.86E-17"},2.11E-15,"full_name=cytochrome P450, family 96, subfamily A, polypeptide 8. cytochrome P450, family 96, subfamily A, polypeptide 8. member of CYP96A","AT5G15580","LNG1",176.63,-1.9311,0.27362,-7.0577,{"v":1.69e-12,"d":"1.69E-12"},{"v":7.2e-11,"d":"7.20E-11"},"full_name=LONGIFOLIA1. longifolia1. Encodes LONGIFOLIA1 (LNG1). Regulates leaf morphology by promoting cell expansion in the leaf-length direction. The LNG1 homologue LNG2 (At3g02170) has similar function."]
["AT3G57400",null,227.98,-2.2311,0.25028,-8.9144,{"v":4.9e-19,"d":"4.90E-19"},{"v":2.13e-17,"d":"2.13E-17"},"transmembrane protein.","AT5G66920","sks17",423.53,1.7924,0.21387,8.3808,{"v":5.26e-17,"d":"5.26E-17"},2.28E-15,"full_name=SKU5 similar 17. SKU5 similar 17.","AT2G41850","PGAZAT",86.344,2.7426,0.38875,7.055,{"v":1.73e-12,"d":"1.73E-12"},{"v":7.33e-11,"d":"7.33E-11"},"full_name=polygalacturonase abscission zone A. thaliana. polygalacturonase ADPG2-like protein. ADPG2."]
["AT1G04560",null,22730,-1.2896,0.1447,-8.9123,{"v":5e-19,"d":"5.00E-19"},2.17E-17,"AWPM-19-like family protein.","AT5G07680","NAC080",156.77,-2.5508,0.30465,-8.373,{"v":5.62e-17,"d":"5.62E-17"},2.43E-15,"full_name=NAC domain containing protein 80. NAC domain containing protein 80.","AT4G25820","XTH14",59.026,5.5668,0.78923,7.0534,1.75E-12,{"v":7.4e-11,"d":"7.40E-11"},"full_name=xyloglucan endotransglucosylase/hydrolase 14. xyloglucan endotransglucosylase/hydrolase 14. Encodes a xyloglucan endotransglycosylase with a clear preference for non-fucosylated xyloglucan polymer."]
["AT2G01190","PDE331",945.13,-1.2359,0.13873,-8.909,{"v":5.15e-19,"d":"5.15E-19"},2.23E-17,"full_name=PIGMENT DEFECTIVE 331. Octicosapeptide/Phox/Bem1p family protein.","AT5G09480",null,284.23,-8.7292,1.0427,-8.3717,{"v":5.68e-17,"d":"5.68E-17"},2.45E-15,"hydroxyproline-rich glycoprotein family protein.","AT3G26650","GAPA",3706.1,0.94088,0.1336,7.0423,{"v":1.89e-12,"d":"1.89E-12"},{"v":7.97e-11,"d":"7.97E-11"},"full_name=glyceraldehyde 3-phosphate dehydrogenase A subunit. glyceraldehyde 3-phosphate dehydrogenase A subunit. Encodes one of the two subunits forming the photosynthetic glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and as such a constituent of the supramolecular complex with phosphoribulokinase (PRK) thought to be linked by a small peptide encoded by CP12-2. GapA-1 is coordinately expressed by light with PRK and CP12-2. The enzyme activity, tested in leaf protein extracts dropped significantly after external sucrose treatment for the photosynthetic GAPDH (NADPH-dependent) but not for the cytosolic GAPDH (NADH-dependent)."]
["AT3G55120","TT5",408.92,2.1948,0.24638,8.9085,{"v":5.17e-19,"d":"5.17E-19"},2.23E-17,"full_name=TRANSPARENT TESTA 5. Chalcone-flavanone isomerase family protein. Catalyzes the conversion of chalcones into flavanones. Required for the accumulation of purple anthocyanins in leaves and stems. Co-expressed with CHS.","AT4G30290","XTH19",509.61,1.5434,0.18465,8.3585,{"v":6.35e-17,"d":"6.35E-17"},{"v":2.73e-15,"d":"2.73E-15"},"full_name=xyloglucan endotransglucosylase/hydrolase 19. xyloglucan endotransglucosylase/hydrolase 19. Encodes a xyloglucan endotransglucosylase/hydrolase with only only the endotransglucosylase (XET; EC 2.4.1.207) activity towards xyloglucan and non-detectable endohydrolytic (XEH; EC 3.2.1.151) activity. Expressed throughout both the main and the lateral root, with intensive expression at the dividing and elongating regions. Is expressed in lateral root primordia but expression ceases after lateral root begins to grow. Involved in cell proliferation in incised inflorescence stems.","AT3G28040",null,150.27,-2.0487,0.29091,-7.0423,{"v":1.89e-12,"d":"1.89E-12"},{"v":7.97e-11,"d":"7.97E-11"},"Leucine-rich receptor-like protein kinase family protein."]
["AT1G75190",null,114.72,3.5958,0.40369,8.9072,{"v":5.23e-19,"d":"5.23E-19"},{"v":2.25e-17,"d":"2.25E-17"},"hypothetical protein.","AT3G18000","XPL1",1867.5,1.5807,0.18913,8.3577,{"v":6.4e-17,"d":"6.40E-17"},2.74E-15,"full_name=XIPOTL 1. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. Arabidopsis thaliana N-methyltransferase-like protein mRNA. Reduce transmission through pollen.","AT3G10610",null,266.3,-1.5257,0.21677,-7.0386,{"v":1.94e-12,"d":"1.94E-12"},8.17E-11,"Ribosomal S17 family protein."]
["AT1G76790","IGMT5",2510.8,1.1356,0.12757,8.9016,{"v":5.5e-19,"d":"5.50E-19"},{"v":2.37e-17,"d":"2.37E-17"},"full_name=indole glucosinolate O-methyltransferase 5. O-methyltransferase family protein.","AT2G28840","XBAT31",3225.7,1.0613,0.12703,8.3547,{"v":6.56e-17,"d":"6.56E-17"},{"v":2.81e-15,"d":"2.81E-15"},"full_name=XB3 ortholog 1 in Arabidopsis thaliana. hypothetical protein.","AT5G67030","ABA1",1181.7,1.3834,0.19665,7.0348,{"v":2E-12,"d":"2.00E-12"},{"v":8.38e-11,"d":"8.38E-11"},"full_name=ABA DEFICIENT 1. zeaxanthin epoxidase (ZEP) (ABA1). Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do."]
["AT3G54320","WRI1",284.23,-2.1049,0.23653,-8.8994,{"v":5.61e-19,"d":"5.61E-19"},2.41E-17,"full_name=WRINKLED 1. Integrase-type DNA-binding superfamily protein. WRINKLED1 encodes transcription factor of the AP2/ERWEBP class. Protein has two plant-specific (AP2/EREB) DNA-binding domains and is involved in the control of storage compound biosynthesis in Arabidopsis. Mutants have wrinkled seed phenotype, due to a defect in the incorporation of sucrose and glucose into triacylglycerols. Transgenic sGsL plants (21-day-old) grown on 6% sucrose for 24 hours had 2-fold increase in levels of expressions (sGsL line carries a single copy of T-DNA containing the Spomin::GUS-Spomin::LUC dual reporter genes in the upper arm of chromosome 5 of ecotype Col-0. The sporamin .minimal. promoter directs sugar-inducible expression of the LUC and GUS reporters in leaves). Regulation by LEC2 promotes fatty acid accumulation during seed maturation.","AT4G03190","GRH1",329.33,1.6253,0.19455,8.3539,{"v":6.6E-17,"d":"6.60E-17"},{"v":2.82e-15,"d":"2.82E-15"},"full_name=GRR1-like protein 1. GRR1-like protein 1. Encodes an F box protein belonging to the TIR1 subfamily. This protein forms SCF complexes with ASK1 and CUL1 and interacts with Aux/IAA proteins in an auxin-dependent manner. It also has sequence similarity to the yeast protein GRR1, which is involved in glucose repression.","AT3G51410",null,106.63,-2.6617,0.37862,-7.0301,{"v":2.06e-12,"d":"2.06E-12"},{"v":8.64e-11,"d":"8.64E-11"},"hypothetical protein (DUF241)."]
["AT5G60300","LecRK-I.9",1133.2,-1.0411,0.11704,-8.8956,{"v":5.81e-19,"d":"5.81E-19"},{"v":2.49e-17,"d":"2.49E-17"},"full_name=lectin receptor kinase I.9. Concanavalin A-like lectin protein kinase family protein. Lectin Receptor Kinase involved in protein-protein interactions with RGD-containing proteins as potential ligands. Role in cell wall-plasma membrane adhesion. Involved in Phytophthora resistance.","AT2G41560","ACA4",703.16,1.3027,0.15682,8.3074,{"v":9.78e-17,"d":"9.78E-17"},{"v":4.17e-15,"d":"4.17E-15"},"full_name=autoinhibited Ca(2+)-ATPase, isoform 4. autoinhibited Ca(2+)-ATPase, isoform 4. Encodes a calmodulin-regulated Ca(2+)-ATPase that improves salt tolerance in yeast. Localized to the vacuole. Lesion mimic phenotype when mutation in the gene is combined with a mutation in ACA11. Lesion mimic phenotype of double knockout can be suppressed by nutritional supplements that increase anion levels (e.g. 15 mM Nitrate, Chloride, or Phosphate).","AT5G14450",null,4360,-0.90458,0.12893,-7.0161,2.28E-12,{"v":9.53e-11,"d":"9.53E-11"},"GDSL-like Lipase/Acylhydrolase superfamily protein."]
["AT1G72160","PATL3",1148.7,-1.0445,0.11743,-8.8949,{"v":5.84e-19,"d":"5.84E-19"},{"v":2.5e-17,"d":"2.50E-17"},"Sec14p-like phosphatidylinositol transfer family protein.","AT5G09640","SCPL19",165.22,-3.3437,0.40271,-8.303,{"v":1.02e-16,"d":"1.02E-16"},4.32E-15,"full_name=serine carboxypeptidase-like 19. serine carboxypeptidase-like 19. encodes a serine carboxypeptidase-like (SCPL) protein. Mutants accumulate sinapoylglucose instead of sinapoylcholine, and have increased levels of choline and decreased activity of the enzyme sinapoylglucose:choline sinapoyltransferase.","AT2G03760","SOT12",343.88,1.5066,0.21507,7.0053,2.46E-12,{"v":1.03e-10,"d":"1.03E-10"},"full_name=sulphotransferase 12. sulfotransferase 12. Encodes a brassinosteroid sulfotransferase. In vitro experiements show that this enzyme has a preference for 24-epibrassinosteroids, particularly 24-epicathasterone, but does not act on castasterone and brassinolide. It also shows sulfating activity toward flavonoids. It is differentially expressed during development, being more abundant in young seedlings and actively growing cell cultures. Expression is induced in response to salicylic acid and methyl jasmonate and bacterial pathogens."]
["AT2G04030","CR88",6856.9,0.71956,0.08093,8.8911,{"v":6.05e-19,"d":"6.05E-19"},{"v":2.58e-17,"d":"2.58E-17"},"Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response and crucial for protein import into the chloroplast stroma. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR.","AT5G26850",null,759.96,1.1766,0.14182,8.2963,1.07E-16,{"v":4.56e-15,"d":"4.56E-15"},"Uncharacterized protein.","AT1G14520","MIOX1",382.12,1.3636,0.19471,7.0032,{"v":2.5e-12,"d":"2.50E-12"},1.04E-10,"full_name=myo-inositol oxygenase 1. myo-inositol oxygenase 1. Encodes MIOX1. Belongs to myo-inositol oxygenase gene family."]
["AT2G02120","PDF2.1",17054,-1.2185,0.13714,-8.8855,{"v":6.36e-19,"d":"6.36E-19"},{"v":2.71e-17,"d":"2.71E-17"},"Scorpion toxin-like knottin superfamily protein. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","AT2G28950","EXPA6",86.924,3.0707,0.37087,8.2798,1.23E-16,{"v":5.22e-15,"d":"5.22E-15"},"full_name=expansin A6. expansin A6. Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","AT1G56110","NOP56",1221,-1.1057,0.1581,-6.9939,{"v":2.67e-12,"d":"2.67E-12"},1.11E-10,"full_name=homolog of nucleolar protein NOP56. NOP56-like pre RNA processing ribonucleoprotein. NOP56-like protein"]
["AT1G52880","NAM",231.55,-1.9801,0.22344,-8.8621,7.86E-19,3.33E-17,"full_name=NO APICAL MERISTEM. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Transcription factor with a NAC domain. Homologous to the petunia gene NAM which is required for the development of the shoot. Expressed in the embryo.","AT2G32150",null,136.88,-2.7933,0.33754,-8.2754,{"v":1.28e-16,"d":"1.28E-16"},5.41E-15,"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein.","AT1G58030","CAT2",2363.4,0.87284,0.12482,6.9928,2.69E-12,1.12E-10,"full_name=cationic amino acid transporter 2. cationic amino acid transporter 2. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast."]
["AT1G20500",null,136.89,-3.5376,0.3998,-8.8484,{"v":8.88e-19,"d":"8.88E-19"},{"v":3.76e-17,"d":"3.76E-17"},"AMP-dependent synthetase and ligase family protein.","AT1G30380","PSAK",848.82,1.5429,0.18652,8.2724,{"v":1.31e-16,"d":"1.31E-16"},{"v":5.53e-15,"d":"5.53E-15"},"full_name=photosystem I subunit K. photosystem I subunit K. Encodes subunit K of photosystem I reaction center.","AT3G48000","ALDH2B4",3561.7,1.0135,0.14501,6.9894,2.76E-12,{"v":1.14e-10,"d":"1.14E-10"},"full_name=aldehyde dehydrogenase 2B4. aldehyde dehydrogenase 2B4. Encodes a putative (NAD+) aldehyde dehydrogenase."]
["AT3G24650","ABI3",4237.7,-1.0231,0.11564,-8.8471,{"v":8.98e-19,"d":"8.98E-19"},{"v":3.79e-17,"d":"3.79E-17"},"full_name=ABA INSENSITIVE 3. AP2/B3-like transcriptional factor family protein. Homologous to the maize transcription factor Viviparous-1. Full length ABI3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of ABI3 requires the B3 DNA-binding domain and an activation domain. In addition to the known N-terminal-located activation domain, a second transcription activation domain was found in the B1 region of ABI3. ABI3 is essential for seed maturation. Regulator of the transition between embryo maturation and early seedling development. Putative seed-specific transcriptional activator. ABI3 is a central regulator in ABA signaling and is unstable in vivo. It interacts with and can by polyubiquitinated by AIP2 in vivo. Based on double mutant analyses, ABI3 interacts genetically with both FUS3 and LEC1 and is involved in controlling accumulation of chlorophyll and anthocyanins, sensitivity to abscisic acid, and expression of the members of the 12S storage protein gene family. In addition, both FUS3 and LEC1 regulate positively the abundance of the ABI3 protein in the seed. Alternative splicing of ABI3 is developmentally regulated by SUA (AT3G54230).","AT3G51880","HMGB1",1117.2,-1.3109,0.15856,-8.2677,{"v":1.37e-16,"d":"1.37E-16"},5.75E-15,"full_name=high mobility group B1. high mobility group B1. Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. In interphase cells, HMGB1 is found throughout the nucleus, whereas in mitotic cells it is not chromatin-associated.","AT2G19750",null,685.11,-1.096,0.15714,-6.975,{"v":3.06e-12,"d":"3.06E-12"},1.26E-10,"Ribosomal protein S30 family protein."]
["AT2G17520","IRE1A",682.53,-1.3474,0.15233,-8.8455,{"v":9.11e-19,"d":"9.11E-19"},{"v":3.84e-17,"d":"3.84E-17"},"Endoribonuclease/protein kinase IRE1-like protein. Encodes a endoribonuclease/protein kinase IRE1-like protein that is predicted to form a type I transmembrane protein structure and contain kinase/endoribonuclease domains at their C-terminal halves. The transcript levels for several ER-stress responsive genes, including six protein disulfide isomerases (PDIs), BiP2, and AtbZIP60 are not affected in ire1-2 null mutants.","AT4G27410","RD26",307.06,-2.2243,0.27035,-8.2277,1.91E-16,{"v":8.01e-15,"d":"8.01E-15"},"full_name=RESPONSIVE TO DESICCATION 26. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.","AT5G64070","PI-4KBETA1",735.92,1.0746,0.15408,6.974,{"v":3.08e-12,"d":"3.08E-12"},1.27E-10,"full_name=phosphatidylinositol 4-OH kinase beta1. phosphatidylinositol 4-OH kinase beta1. Encodes a phosphatidylinositol 4-OH kinase, PI-4Kbeta1. Arabidopsis contains 12 PI-4Ks in three separate families: PI-4Kalphs, PI-4kbeta, and PI-4Kgamma. PI-4Kbeta1 is 83% identical to PI-4kbeta2 encoded by At5g09350. Interacts with the RabA4b GTPase. Important for polarized root hair growth as the loss of this gene and its close relative PI-4kbeta2, leads to the formation of abnormal root hairs."]
["AT4G38740","ROC1",6630.2,-1.131,0.12793,-8.841,{"v":9.48e-19,"d":"9.48E-19"},{"v":3.99e-17,"d":"3.99E-17"},"full_name=rotamase CYP 1. rotamase CYP 1. Encodes cytosolic cyclophilin ROC1.","AT4G18910","NIP1;2",218.26,-2.1176,0.25759,-8.2206,2.02E-16,{"v":8.48e-15,"d":"8.48E-15"},"full_name=NOD26-like intrinsic protein 1;2. NOD26-like intrinsic protein 1;2. Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells.","AT4G23630","BTI1",2422.2,1.1552,0.16592,6.9624,{"v":3.35e-12,"d":"3.35E-12"},{"v":1.37e-10,"d":"1.37E-10"},"full_name=VIRB2-interacting protein 1. VIRB2-interacting protein 1."]
["AT5G15410","DND1",556.7,-1.3481,0.15288,-8.8183,1.16E-18,{"v":4.87e-17,"d":"4.87E-17"},"full_name=DEFENSE NO DEATH 1. Cyclic nucleotide-regulated ion channel family protein. 'defense, no death' gene (DND1) encodes a mutated cyclic nucleotide-gated cation channel; Same as CNGC2 (article ID 229): Cyclic nucleotide gated channel, activated by cAMP, conducts K+ and other monovalent cations but excludes Na+, does not contain the GYG amino acid sequence found in other channels with this conductivity profile. Conducts Ca2+ into cells which is linked to the generation of NO and the NO signaling pathway involved in the innate immune response to pathogens.","AT1G58290","HEMA1",345.46,1.4772,0.17976,8.218,{"v":2.07e-16,"d":"2.07E-16"},{"v":8.65e-15,"d":"8.65E-15"},"Glutamyl-tRNA reductase family protein. Encodes a protein with glutamyl-tRNA reductase (GluTR) activity, catalyzing the NADPH-dependent reduction of Glu-tRNA(Glu) to glutamate 1-semialdehyde (GSA) with the release of free tRNA(Glu). It is involved in the early steps of chlorophyll biosynthesis.","AT1G55360",null,463.56,-1.2462,0.17903,-6.9608,{"v":3.38e-12,"d":"3.38E-12"},{"v":1.39e-10,"d":"1.39E-10"},"tRNA-splicing ligase (DUF239)."]
["AT1G02890",null,1767.8,-1.0804,0.12268,-8.8073,{"v":1.28e-18,"d":"1.28E-18"},{"v":5.36e-17,"d":"5.36E-17"},"AAA-type ATPase family protein.","AT4G16690","MES16",113.27,-2.8604,0.34861,-8.205,{"v":2.31e-16,"d":"2.31E-16"},{"v":9.61e-15,"d":"9.61E-15"},"full_name=methyl esterase 16. methyl esterase 16. Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on MeSA, MeGA4, or MEGA9 in vitro. Although MES16 is similar to MES17, a MeIAA hydrolase, two mes16 mutant lines (SALK_151578) and (SALK_139756) do not show altered sensitivity to MeIAA in root growth assays. MES16 transcripts appear to be more than 10-fold less abundant than those of MES17 in roots.","AT4G02880",null,554.44,1.2807,0.18401,6.9603,{"v":3.39e-12,"d":"3.39E-12"},{"v":1.39e-10,"d":"1.39E-10"},"ELKS/Rab6-interacting/CAST family protein."]
["AT3G52370","FLA15",127.03,-2.8546,0.32413,-8.8071,{"v":1.28e-18,"d":"1.28E-18"},{"v":5.36e-17,"d":"5.36E-17"},"full_name=FASCICLIN-like arabinogalactan protein 15 precursor. FASCICLIN-like arabinogalactan protein 15 precursor.","AT3G44330",null,927.09,1.0422,0.12713,8.1983,{"v":2.44e-16,"d":"2.44E-16"},{"v":1.01e-14,"d":"1.01E-14"},"M28 Zn-peptidase nicastrin.","AT1G03380","ATG18G",441.29,1.2832,0.18443,6.9577,{"v":3.46e-12,"d":"3.46E-12"},1.41E-10,"full_name=homolog of yeast autophagy 18 (ATG18) G. yeast autophagy 18 G-like protein."]
["AT1G09155","PP2-B15",164.38,-3.4953,0.39712,-8.8015,{"v":1.35e-18,"d":"1.35E-18"},{"v":5.63e-17,"d":"5.63E-17"},"full_name=phloem protein 2-B15. phloem protein 2-B15.","AT5G42900","COR27",633.78,1.4124,0.1723,8.1975,2.46E-16,1.02E-14,"full_name=cold regulated gene 27. cold regulated protein 27.","AT3G10740","ASD1",579.05,1.1495,0.16534,6.9527,{"v":3.58e-12,"d":"3.58E-12"},{"v":1.46e-10,"d":"1.46E-10"},"full_name=alpha-L-arabinofuranosidase 1. alpha-L-arabinofuranosidase 1. Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 51 of glycoside hydrolases. It may be involved in cell wall modification."]
["AT3G27200",null,456.56,-1.5422,0.17523,-8.8008,{"v":1.36e-18,"d":"1.36E-18"},{"v":5.65e-17,"d":"5.65E-17"},"Cupredoxin superfamily protein.","AT5G02260","EXPA9",448.25,1.3951,0.17047,8.184,{"v":2.75e-16,"d":"2.75E-16"},{"v":1.14e-14,"d":"1.14E-14"},"full_name=expansin A9. expansin A9. member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)","AT2G32210","ATHCYSTM6",67.519,3.2263,0.46447,6.9461,3.75E-12,{"v":1.52e-10,"d":"1.52E-10"},"cysteine-rich/transmembrane domain A-like protein."]
["AT5G59870","HTA6",287.71,1.8827,0.21409,8.7938,1.45E-18,{"v":6e-17,"d":"6.00E-17"},"full_name=histone H2A 6. histone H2A 6. Encodes HTA6, a histone H2A protein.","AT3G12800","SDRB",689.68,-1.2825,0.15692,-8.1731,{"v":3.01e-16,"d":"3.01E-16"},1.24E-14,"full_name=short-chain dehydrogenase-reductase B. short-chain dehydrogenase-reductase B.","AT4G27780","ACBP2",295.48,1.469,0.21154,6.9444,{"v":3.8E-12,"d":"3.80E-12"},{"v":1.54e-10,"d":"1.54E-10"},"full_name=acyl-CoA binding protein 2. acyl-CoA binding protein 2. Encodes acyl-CoA-binding protein with ankyrin repeats"]
["AT2G38870",null,888.27,-1.1255,0.128,-8.7929,{"v":1.46e-18,"d":"1.46E-18"},{"v":6.03e-17,"d":"6.03E-17"},"Serine protease inhibitor, potato inhibitor I-type family protein. Predicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860.","AT4G19030","NLM1",62.01,3.9175,0.47964,8.1676,{"v":3.15e-16,"d":"3.15E-16"},{"v":1.3E-14,"d":"1.30E-14"},"full_name=NOD26-like major intrinsic protein 1. NOD26-like major intrinsic protein 1. an aquaporin whose expression level is reduced by ABA, NaCl, dark, and dessication. is expressed at relatively low levels under normal conditions. Also functions in arsenite transport and tolerance.","AT1G30330","ARF6",410.73,-1.2888,0.18575,-6.9384,{"v":3.97e-12,"d":"3.97E-12"},{"v":1.6e-10,"d":"1.60E-10"},"full_name=auxin response factor 6. auxin response factor 6. Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167."]
["AT3G26790","FUS3",617.62,-1.9375,0.22045,-8.7888,{"v":1.51e-18,"d":"1.51E-18"},{"v":6.24e-17,"d":"6.24E-17"},"full_name=FUSCA 3. AP2/B3-like transcriptional factor family protein. Transcriptional factor with high similarity to the B3 region of the VP1/ABI3-like proteins. Full length FUS3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of FUS3 requires the B3 DNA-binding domain and an activation domain. FUS3 specifies cotyledon identity. Regulator of gene expression during late embryogenesis. Involved in the control foliar organ identity in Arabidopsis by regulating the synthesis of two hormones, abscisic acid and gibberellin. FUS3 together with LEC1 positively regulate the abundance of the ABI3 protein in the seed.","AT5G57660","COL5",161.71,2.0966,0.25675,8.1661,{"v":3.18e-16,"d":"3.18E-16"},{"v":1.31e-14,"d":"1.31E-14"},"full_name=CONSTANS-like 5. CONSTANS-like 5.","AT4G05100","MYB74",96.622,3.6022,0.51976,6.9306,{"v":4.19e-12,"d":"4.19E-12"},{"v":1.69e-10,"d":"1.69E-10"},"full_name=myb domain protein 74. myb domain protein 74. Member of the R2R3 factor gene family."]
["AT4G15160","PAC2",515.42,1.7858,0.20325,8.7861,1.55E-18,{"v":6.38e-17,"d":"6.38E-17"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT3G26650","GAPA",2629.6,0.85559,0.10489,8.1572,3.43E-16,1.41E-14,"full_name=glyceraldehyde 3-phosphate dehydrogenase A subunit. glyceraldehyde 3-phosphate dehydrogenase A subunit. Encodes one of the two subunits forming the photosynthetic glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and as such a constituent of the supramolecular complex with phosphoribulokinase (PRK) thought to be linked by a small peptide encoded by CP12-2. GapA-1 is coordinately expressed by light with PRK and CP12-2. The enzyme activity, tested in leaf protein extracts dropped significantly after external sucrose treatment for the photosynthetic GAPDH (NADPH-dependent) but not for the cytosolic GAPDH (NADH-dependent).","AT5G02760","APD7",74.229,-3.1412,0.45432,-6.9139,{"v":4.72e-12,"d":"4.72E-12"},{"v":1.9e-10,"d":"1.90E-10"},"Protein phosphatase 2C family protein."]
["AT4G18680",null,821.08,-1.8137,0.20656,-8.7805,1.63E-18,6.69E-17,"delay of germination protein.","AT5G18130",null,516.17,-2.0922,0.25665,-8.1517,{"v":3.59e-16,"d":"3.59E-16"},1.47E-14,"transmembrane protein.","ATMG00020","rrn26",2492.5,0.84673,0.12251,6.9114,{"v":4.8e-12,"d":"4.80E-12"},{"v":1.93e-10,"d":"1.93E-10"}]
["AT5G49820","RUS6",500.14,-1.4327,0.16319,-8.779,{"v":1.65e-18,"d":"1.65E-18"},{"v":6.77e-17,"d":"6.77E-17"},"full_name=ROOT UV-B SENSITIVE 6. root UVB sensitive protein (Protein of unknown function, DUF647).","AT3G22750",null,102.2,-3.139,0.38552,-8.1422,{"v":3.88e-16,"d":"3.88E-16"},1.59E-14,"Protein kinase superfamily protein.","AT3G02380","COL2",49.385,4.3861,0.63498,6.9076,{"v":4.93e-12,"d":"4.93E-12"},{"v":1.98e-10,"d":"1.98E-10"},"full_name=CONSTANS-like 2. CONSTANS-like 2. homologous to the flowering-time gene CONSTANS (CO) encoding zinc-finger proteins"]
["AT3G29590","AT5MAT",130.3,3.2546,0.37077,8.7779,1.67E-18,{"v":6.82e-17,"d":"6.82E-17"},"HXXXD-type acyl-transferase family protein. At3g29590 (At5MAT) encodes a malonyl-CoA:anthocyanidin 5-O-glucoside-6-O-malonyltransferase that is coordinately expressed with a epistatic 5-O-anthocyanidin glucosyltransferase (At4g14090). The enzyme is involved in the malonylation of anthocyanins in Arabidopsis.","AT4G34180","CYCLASE1",1283.5,-0.95091,0.1168,-8.1411,{"v":3.92e-16,"d":"3.92E-16"},{"v":1.6e-14,"d":"1.60E-14"},"Cyclase family protein.","AT5G24990",null,210.96,-1.7408,0.25237,-6.898,5.27E-12,2.11E-10,"enhanced disease resistance-like protein (DUF1336)."]
["AT2G27370","CASP3",110.95,-3.5116,0.40071,-8.7633,{"v":1.9e-18,"d":"1.90E-18"},{"v":7.75e-17,"d":"7.75E-17"},"full_name=Casparian strip membrane domain protein 3. Uncharacterized protein family (UPF0497).","AT5G54270","LHCB3",2190.7,1.7358,0.21328,8.1384,{"v":4e-16,"d":"4.00E-16"},{"v":1.63e-14,"d":"1.63E-14"},"full_name=light-harvesting chlorophyll B-binding protein 3. light-harvesting chlorophyll B-binding protein 3. Lhcb3 protein is a component of the main light harvesting chlorophyll a/b-protein complex of Photosystem II (LHC II).","AT4G33980","COR28",318.09,1.4549,0.21092,6.8976,{"v":5.29e-12,"d":"5.29E-12"},2.11E-10,"hypothetical protein."]
["AT1G63300",null,354.29,-1.8132,0.20693,-8.7622,{"v":1.92e-18,"d":"1.92E-18"},{"v":7.81e-17,"d":"7.81E-17"},"Myosin heavy chain-related protein.","AT3G45010","scpl48",669.13,-1.3601,0.16712,-8.1381,{"v":4.01e-16,"d":"4.01E-16"},{"v":1.63e-14,"d":"1.63E-14"},"full_name=serine carboxypeptidase-like 48. serine carboxypeptidase-like 48.","AT3G25870",null,204.21,2.5544,0.37057,6.8932,{"v":5.46e-12,"d":"5.46E-12"},2.17E-10,"hypothetical protein."]
["AT3G08030","ATHA2-1",4225.8,1.0628,0.12137,8.7571,{"v":2e-18,"d":"2.00E-18"},{"v":8.15e-17,"d":"8.15E-17"},"DNA-directed RNA polymerase subunit beta (Protein of unknown function, DUF642). The mRNA of this gene is expressed in viable seeds. Its detection in a dry seed lot has potential for use as a molecular marker for germination performance as absence of expression correlates with decreased germination.","AT5G14120",null,509.92,-1.5695,0.1932,-8.1235,{"v":4.53e-16,"d":"4.53E-16"},{"v":1.83e-14,"d":"1.83E-14"},"Major facilitator superfamily protein.","AT1G67870",null,154.9,2.0599,0.29887,6.8924,{"v":5.49e-12,"d":"5.49E-12"},2.18E-10,"glycine-rich protein."]
["AT1G08910","PIAL1",1857,-0.86083,0.098367,-8.7512,{"v":2.11e-18,"d":"2.11E-18"},{"v":8.57e-17,"d":"8.57E-17"},"zinc ion binding protein. Encodes an SP-RING domain containing protein that functions in sumolaytion and is involved in positive regulation of sulfur metabolism and stress response.","AT5G39850",null,583.4,-1.2557,0.15484,-8.1097,{"v":5.08e-16,"d":"5.08E-16"},{"v":2.05e-14,"d":"2.05E-14"},"Ribosomal protein S4.","AT3G03240",null,63.198,4.0366,0.58603,6.888,{"v":5.66e-12,"d":"5.66E-12"},2.24E-10,"alpha/beta-Hydrolases superfamily protein."]
["AT4G32290",null,364.36,-1.9258,0.22023,-8.7447,2.24E-18,{"v":9.06e-17,"d":"9.06E-17"},"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein.","AT3G17810","PYD1",1279.9,-1.0931,0.13481,-8.1084,{"v":5.13e-16,"d":"5.13E-16"},2.07E-14,"full_name=pyrimidine 1. pyrimidine 1. Encodes a protein predicted to have dihydropyrimidine dehydrogenase activity. Its activity has not been demonstrated in vivo, but, it is required for efficient uracil catabolism in Arabidopsis. It localizes to the plastid.","AT4G01000",null,1262,1.2578,0.18265,6.8866,{"v":5.71e-12,"d":"5.71E-12"},2.26E-10,"Ubiquitin-like superfamily protein."]
["AT1G75490",null,810.53,-1.6591,0.18988,-8.7376,2.38E-18,{"v":9.63e-17,"d":"9.63E-17"},"Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.","AT1G48130","PER1",193.48,-3.117,0.38457,-8.1052,{"v":5.26e-16,"d":"5.26E-16"},{"v":2.12e-14,"d":"2.12E-14"},"full_name=1-cysteine peroxiredoxin 1. 1-cysteine peroxiredoxin 1. encodes a protein similar to the 1-cysteine (1-Cys) peroxiredoxin family of antioxidants. Expression is limited to seed (aleurone and embryo) and is not induced by ABA or drought.","AT1G77180","SKIP",1310.8,1.2909,0.18746,6.8861,5.73E-12,2.26E-10,"full_name=SNW/Ski-interacting protein. chromatin protein family. Encodes a putative transcriptional factor. Shows transcriptional activator activity in yeast. Involved in response to abscisic acid, salt and osmotic stress."]
["AT1G15690","AVP1",13500,0.94445,0.10819,8.7294,{"v":2.56e-18,"d":"2.56E-18"},1.03E-16,"Inorganic H pyrophosphatase family protein. Encodes a H(+)-translocating (pyrophosphate-energized) inorganic pyrophosphatase (H(+)-PPase; EC 3.6.1.1) located in the vacuolar membrane. Expression is found in all tissues examined, including meristems and floral organ primordium. Expression is particularly enhanced in pollen, and is repressed by light. Over expression and loss of function phenotypes suggest AVP1 is involved in regulation of apoplastic pH and auxin transport. The effect on auxin transport likely involves effects of extracellular pH on subcellular localization of auxin efflux carriers such as PIN1.","AT1G08380","PSAO",1236.9,1.3771,0.16991,8.1048,5.28E-16,{"v":2.12e-14,"d":"2.12E-14"},"full_name=photosystem I subunit O. photosystem I subunit O. Encodes subunit O of photosystem I.","AT5G54190","PORA",1702.1,-0.91394,0.13276,-6.8843,{"v":5.81e-12,"d":"5.81E-12"},{"v":2.29e-10,"d":"2.29E-10"},"full_name=protochlorophyllide oxidoreductase A. protochlorophyllide oxidoreductase A. light-dependent NADPH:protochlorophyllide oxidoreductase A"]
["AT1G60730",null,767.22,-1.2034,0.13796,-8.7231,{"v":2.71e-18,"d":"2.71E-18"},1.09E-16,"NAD(P)-linked oxidoreductase superfamily protein.","AT2G45180","DRN1",75.687,6.6897,0.82551,8.1038,{"v":5.33e-16,"d":"5.33E-16"},{"v":2.14e-14,"d":"2.14E-14"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT5G05250",null,208.31,-1.7896,0.26018,-6.8782,{"v":6.06e-12,"d":"6.06E-12"},{"v":2.38e-10,"d":"2.38E-10"},"hypothetical protein."]
["AT1G64510","PRPS6",1476.3,0.93037,0.10677,8.7136,{"v":2.94e-18,"d":"2.94E-18"},{"v":1.18e-16,"d":"1.18E-16"},"Translation elongation factor EF1B/ribosomal protein S6 family protein.","AT5G25830","GATA12",98.734,2.905,0.35874,8.0979,{"v":5.59e-16,"d":"5.59E-16"},{"v":2.24e-14,"d":"2.24E-14"},"full_name=GATA transcription factor 12. GATA transcription factor 12. Encodes a member of the GATA factor family of zinc finger transcription factors.","AT5G62800",null,94.096,3.1846,0.46318,6.8755,{"v":6.18e-12,"d":"6.18E-12"},{"v":2.42e-10,"d":"2.42E-10"},"Protein with RING/U-box and TRAF-like domain."]
["AT4G14780",null,442.96,-1.6343,0.18762,-8.7109,{"v":3.01e-18,"d":"3.01E-18"},{"v":1.21e-16,"d":"1.21E-16"},"Protein kinase superfamily protein.","AT3G51860","CAX3",553.45,-1.3879,0.17166,-8.0848,{"v":6.22e-16,"d":"6.22E-16"},{"v":2.48e-14,"d":"2.48E-14"},"full_name=cation exchanger 3. cation exchanger 3.","AT1G15670","KMD2",190.05,-1.8785,0.27331,-6.8732,{"v":6.28e-12,"d":"6.28E-12"},{"v":2.46e-10,"d":"2.46E-10"},"Galactose oxidase/kelch repeat superfamily protein. Encodes a member of a family of F-box proteins, called the KISS ME DEADLY (KMD) family, that targets type-B ARR proteins for degradation and is involved in the negative regulation of the cytokinin response. Also named as KFB1, a member of a group of Kelch repeat F-box proteins that negatively regulate phenylpropanoid biosynthesis by targeting the phenypropanoid biosynthesis enzyme phenylalanine ammonia-lyase."]
["AT3G27160","GHS1",1060.2,1.0097,0.11595,8.7081,{"v":3.09e-18,"d":"3.09E-18"},1.23E-16,"full_name=GLUCOSE HYPERSENSITIVE 1. Ribosomal protein S21 family protein. GHS1 encodes plastid ribosomal protein S21","AT5G03795",null,91.423,-4.2218,0.52235,-8.0823,{"v":6.35e-16,"d":"6.35E-16"},2.53E-14,"Exostosin family protein.","AT3G12670","emb2742",1645,0.90227,0.13143,6.865,{"v":6.65e-12,"d":"6.65E-12"},{"v":2.6e-10,"d":"2.60E-10"},"full_name=embryo defective 2742. CTP synthase family protein."]
["AT1G27930","AGM1",129.39,2.699,0.30994,8.708,{"v":3.09e-18,"d":"3.09E-18"},1.23E-16,"glucuronoxylan 4-O-methyltransferase-like protein (DUF579). Function unknown. Interacts with eIF3.","AT5G66040","STR16",1131.2,-1.1135,0.1379,-8.0745,{"v":6.77e-16,"d":"6.77E-16"},{"v":2.69e-14,"d":"2.69E-14"},"full_name=sulfurtransferase protein 16. sulfurtransferase protein 16. Encodes a protein with thiosulfate sulfurtransferase/rhodanese activity in vitro, however, it is likely to use a substrate other than thiosulfate or 3-mercaptopyruvate in vivo.","AT1G47980",null,59.89,3.6745,0.53558,6.8608,{"v":6.85e-12,"d":"6.85E-12"},{"v":2.67e-10,"d":"2.67E-10"},"desiccation-like protein."]
["AT4G24040","TRE1",222.95,-2.1498,0.24717,-8.6976,{"v":3.39e-18,"d":"3.39E-18"},1.35E-16,"full_name=trehalase 1. trehalase 1. Encodes a trehalase, member of Glycoside Hydrolase Family 37.","AT4G19120","ERD3",243.25,1.6706,0.20705,8.0686,{"v":7.11e-16,"d":"7.11E-16"},{"v":2.82e-14,"d":"2.82E-14"},"full_name=early-responsive to dehydration 3. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT1G67300",null,810.75,1.0983,0.16026,6.8536,{"v":7.2E-12,"d":"7.20E-12"},{"v":2.8e-10,"d":"2.80E-10"},"Major facilitator superfamily protein."]
["AT5G13110","G6PD2",441.3,-1.6151,0.18572,-8.6962,{"v":3.43e-18,"d":"3.43E-18"},{"v":1.36e-16,"d":"1.36E-16"},"full_name=glucose-6-phosphate dehydrogenase 2. glucose-6-phosphate dehydrogenase 2. Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.","AT5G28540","BIP1",2949.4,0.82704,0.10251,8.0675,{"v":7.18e-16,"d":"7.18E-16"},{"v":2.84e-14,"d":"2.84E-14"},"heat shock protein 70 (Hsp 70) family protein. Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.","AT1G04820","TUA4",2202.8,-0.88927,0.13,-6.8405,{"v":7.89e-12,"d":"7.89E-12"},{"v":3.06e-10,"d":"3.06E-10"},"full_name=tubulin alpha-4 chain. tubulin alpha-4 chain. Encodes an alpha tubulin isoform that is expressed in roots, leaves and flowers."]
["AT5G45190",null,323.51,1.5958,0.18384,8.6807,{"v":3.93e-18,"d":"3.93E-18"},1.56E-16,"Cyclin family protein. Encodes a cyclin T partner CYCT1;5. Plays important roles in infection with Cauliflower mosaic virus (CaMV).","AT4G30650",null,1404.2,1.1485,0.14242,8.0641,{"v":7.38e-16,"d":"7.38E-16"},{"v":2.91e-14,"d":"2.91E-14"},"Low temperature and salt responsive protein family.","AT1G77330","ACO5",247.89,-1.5882,0.23292,-6.8187,{"v":9.19e-12,"d":"9.19E-12"},{"v":3.56e-10,"d":"3.56E-10"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor)"]
["AT5G13690","CYL1",1250,-0.9805,0.11302,-8.6752,{"v":4.13e-18,"d":"4.13E-18"},{"v":1.63e-16,"d":"1.63E-16"},"full_name=CYCLOPS 1. alpha-N-acetylglucosaminidase family / NAGLU family. Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.","AT2G16850","PIP2;8",145.84,2.1617,0.26828,8.0576,{"v":7.78e-16,"d":"7.78E-16"},{"v":3.07e-14,"d":"3.07E-14"},"full_name=plasma membrane intrinsic protein 2;8. plasma membrane intrinsic protein 2;8.","AT2G36640","ECP63",123.78,2.9048,0.42626,6.8145,{"v":9.46e-12,"d":"9.46E-12"},{"v":3.65e-10,"d":"3.65E-10"},"full_name=embryonic cell protein 63. embryonic cell protein 63. Encodes putative phosphotyrosine protein belonging to late embryogenesis abundant (LEA) protein in group 3 that might be involved in maturation and desiccation tolerance of seeds. RFLP and CAPS mapping place it on chromosome 4 but the nucleotide sequence maps it to chromosome 2."]
["AT3G63160","OEP6",8971,0.69438,0.080061,8.6731,{"v":4.21e-18,"d":"4.21E-18"},{"v":1.66e-16,"d":"1.66E-16"},"full_name=outer envelope protein 6. outer envelope membrane protein.","AT4G22810","AHL24",142.26,2.2931,0.28497,8.0469,{"v":8.49e-16,"d":"8.49E-16"},{"v":3.34e-14,"d":"3.34E-14"},"Putative AT-hook DNA-binding family protein.","AT5G45430",null,842.95,1.0173,0.14952,6.804,{"v":1.02e-11,"d":"1.02E-11"},{"v":3.92e-10,"d":"3.92E-10"},"Protein kinase superfamily protein."]
["AT5G23190","CYP86B1",358.48,-1.9908,0.22998,-8.6566,{"v":4.86e-18,"d":"4.86E-18"},{"v":1.92e-16,"d":"1.92E-16"},"full_name=cytochrome P450, family 86, subfamily B, polypeptide 1. cytochrome P450, family 86, subfamily B, polypeptide 1. cytochrome P450 CYP86B1, nuclear gene for chloroplast product. CYP86B1 is a very long chain fatty acid hydroxylase specifically involved in polyester monomer biosynthesis during the course of plant development.","AT4G23670",null,2167.4,3.4073,0.4247,8.0228,1.03E-15,{"v":4.06e-14,"d":"4.06E-14"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein.","AT2G24270","ALDH11A3",2418,0.9311,0.13712,6.7905,{"v":1.12e-11,"d":"1.12E-11"},{"v":4.3e-10,"d":"4.30E-10"},"full_name=aldehyde dehydrogenase 11A3. aldehyde dehydrogenase 11A3. Encodes a protein with non-phosphorylating NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity. The activity of the enzyme was determined from leaf extracts; the enzyme has not been purified to confirm activity."]
["AT5G51810","GA20OX2",287.36,-1.7912,0.20702,-8.6523,{"v":5.05e-18,"d":"5.05E-18"},{"v":1.98e-16,"d":"1.98E-16"},"full_name=gibberellin 20 oxidase 2. gibberellin 20 oxidase 2. Encodes gibberellin 20-oxidase. Involved in gibberellin biosynthesis. Up-regulated by far red light in elongating petioles. Not regulated by a circadian clock.","AT1G09750",null,322.63,1.7294,0.21558,8.0222,{"v":1.04e-15,"d":"1.04E-15"},{"v":4.07e-14,"d":"4.07E-14"},"Eukaryotic aspartyl protease family protein.","AT5G22440",null,1177.8,-0.99794,0.14705,-6.7863,{"v":1.15e-11,"d":"1.15E-11"},{"v":4.42e-10,"d":"4.42E-10"},"Ribosomal protein L1p/L10e family."]
["AT1G29050","TBL38",392.22,-1.6931,0.19592,-8.642,{"v":5.52e-18,"d":"5.52E-18"},2.17E-16,"full_name=TRICHOME BIREFRINGENCE-LIKE 38. TRICHOME BIREFRINGENCE-LIKE 38. Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT4G02280","SUS3",2826.6,-1.4191,0.17699,-8.0176,1.08E-15,{"v":4.22e-14,"d":"4.22E-14"},"full_name=sucrose synthase 3. sucrose synthase 3. Encodes a protein with sucrose synthase activity (SUS3). It appears to be important for sucrose metabolism in developing seeds, especially during the late maturation phase, about 18 days after flowering.","AT1G13280","AOC4",313.68,-1.4558,0.21462,-6.7832,{"v":1.18e-11,"d":"1.18E-11"},{"v":4.5E-10,"d":"4.50E-10"},"full_name=allene oxide cyclase 4. allene oxide cyclase 4. Encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is reduced during senescence, a process that involves jasmonic acid signalling pathway."]
["AT4G01310","PRPL5",2172,0.83814,0.097036,8.6374,{"v":5.75e-18,"d":"5.75E-18"},{"v":2.25e-16,"d":"2.25E-16"},"Ribosomal L5P family protein.","AT1G54000","GLL22",3182.7,1.1078,0.1383,8.0099,1.15E-15,{"v":4.48e-14,"d":"4.48E-14"},"full_name=GDSL lipase-like protein 22. GDSL-like Lipase/Acylhydrolase superfamily protein.","AT5G58900","DIV1",160.26,-1.9163,0.28278,-6.7767,1.23E-11,{"v":4.7e-10,"d":"4.70E-10"},"Homeodomain-like transcriptional regulator."]
["AT1G05510","OBAP1A",431.58,-2.685,0.31091,-8.6358,{"v":5.83e-18,"d":"5.83E-18"},{"v":2.28e-16,"d":"2.28E-16"},"naphthalene 1,2-dioxygenase subunit alpha (DUF1264). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT1G72070",null,165.19,2.1804,0.27225,8.0086,{"v":1.16e-15,"d":"1.16E-15"},{"v":4.52e-14,"d":"4.52E-14"},"Chaperone DnaJ-domain superfamily protein.","AT5G48160","OBE2",909.21,1.2535,0.18502,6.7745,1.25E-11,{"v":4.75e-10,"d":"4.75E-10"},"full_name=OBERON2. potyvirus VPg interacting protein (DUF1423). Encodes a nuclear PHD finger protein that is functionally redundant with OBE1 and plays an important role in the maintenance and/or establishment of the root and shoot apical meristems."]
["AT3G52960","PRXIIE",3994.5,-0.70915,0.082185,-8.6287,{"v":6.2e-18,"d":"6.20E-18"},{"v":2.42e-16,"d":"2.42E-16"},"Thioredoxin superfamily protein.","AT5G42050","NRP",2116.2,-1.0882,0.13596,-8.0043,{"v":1.2E-15,"d":"1.20E-15"},{"v":4.67e-14,"d":"4.67E-14"},"DCD (Development and Cell Death) domain protein.","AT3G18130","RACK1C_AT",697.26,-1.2173,0.17968,-6.7745,1.25E-11,{"v":4.75e-10,"d":"4.75E-10"},"full_name=receptor for activated C kinase 1C. receptor for activated C kinase 1C. Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1C has no phenotype on its own and probably acts redundantly with RACK1A and RACK1B."]
["AT1G05190","emb2394",2123.3,0.94539,0.10974,8.6149,{"v":7e-18,"d":"7.00E-18"},{"v":2.72e-16,"d":"2.72E-16"},"full_name=embryo defective 2394. Ribosomal protein L6 family.","AT5G56540","AGP14",79.463,-4.4995,0.56266,-7.9969,{"v":1.28e-15,"d":"1.28E-15"},{"v":4.94e-14,"d":"4.94E-14"},"full_name=arabinogalactan protein 14. arabinogalactan protein 14. Encodes arabinogalactan protein (AGP14). Mutants exhibit longer root hairs.","AT4G09650","ATPD",724.53,-1.0821,0.16,-6.7631,1.35E-11,{"v":5.13e-10,"d":"5.13E-10"},"full_name=ATP synthase delta-subunit gene. F-type H+-transporting ATPase subunit delta. Encodes the chloroplast ATPase delta-subunit."]
["AT1G30360","ERD4",1851.7,-0.89532,0.10394,-8.614,{"v":7.06e-18,"d":"7.06E-18"},{"v":2.74e-16,"d":"2.74E-16"},"full_name=early-responsive to dehydration 4. Early-responsive to dehydration stress protein (ERD4).","AT3G16190",null,740.7,-1.3778,0.17247,-7.9885,1.37E-15,5.28E-14,"Isochorismatase family protein.","AT5G13630","GUN5",1865.8,1.3195,0.19517,6.7607,1.37E-11,{"v":5.21e-10,"d":"5.21E-10"},"full_name=GENOMES UNCOUPLED 5. magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH). Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction."]
["AT1G29930","CAB1",10101,-1.0466,0.12157,-8.6097,{"v":7.33e-18,"d":"7.33E-18"},{"v":2.84e-16,"d":"2.84E-16"},"full_name=chlorophyll A/B binding protein 1. chlorophyll A/B binding protein 1. Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center.","AT1G32080","LrgB",188.59,2.0215,0.25307,7.9881,1.37E-15,{"v":5.29e-14,"d":"5.29E-14"},"membrane protein. Encodes a plant LrgAB/CidAB protein localized to the chloroplast envelope that is involved in chloroplast development, carbon partitioning and leaf senescence. The gene may have evolved from gene fusion of bacterial lrgA and lrgB.","AT5G36100",null,189.64,1.8202,0.26941,6.7565,1.41E-11,{"v":5.35e-10,"d":"5.35E-10"},"transmembrane protein."]
["AT1G75750","GASA1",444.34,2.3831,0.2774,8.5908,{"v":8.63e-18,"d":"8.63E-18"},3.34E-16,"full_name=GAST1 protein homolog 1. GAST1 protein homolog 1. GA-responsive GAST1 protein homolog regulated by BR and GA antagonistically. Possibly involved in cell elongation based on expression data","AT1G13990",null,271.67,-1.6973,0.21252,-7.9867,{"v":1.39e-15,"d":"1.39E-15"},{"v":5.34e-14,"d":"5.34E-14"},"plant/protein.","AT5G65550",null,77.998,2.7624,0.40905,6.7531,1.45E-11,{"v":5.47e-10,"d":"5.47E-10"},"UDP-Glycosyltransferase superfamily protein."]
["AT5G07190","ATS3",8072.5,-2.8282,0.32932,-8.5879,{"v":8.86e-18,"d":"8.86E-18"},{"v":3.42e-16,"d":"3.42E-16"},"full_name=seed gene 3. embryo-specific protein 3. Gene is expressed preferentially in the embryo and encodes a unique protein of unknown function.","AT5G65207",null,916.88,-1.3972,0.17508,-7.9808,{"v":1.45e-15,"d":"1.45E-15"},5.59E-14,"hypothetical protein.","AT5G59850",null,1531.2,-0.93492,0.1385,-6.7501,1.48E-11,{"v":5.57e-10,"d":"5.57E-10"},"Ribosomal protein S8 family protein."]
["AT5G42180","PER64",85.221,-3.5591,0.41593,-8.5568,1.16E-17,{"v":4.47e-16,"d":"4.47E-16"},"full_name=peroxidase 64. Peroxidase superfamily protein.","AT4G09650","ATPD",976.23,1.0385,0.13019,7.9768,{"v":1.5e-15,"d":"1.50E-15"},{"v":5.76e-14,"d":"5.76E-14"},"full_name=ATP synthase delta-subunit gene. F-type H+-transporting ATPase subunit delta. Encodes the chloroplast ATPase delta-subunit.","AT4G35790","PLDDELTA",1649.5,1.0311,0.15286,6.7455,1.52E-11,{"v":5.73e-10,"d":"5.73E-10"},"full_name=phospholipase D delta. phospholipase D delta. Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death."]
["AT5G46580","SOT1",1152.2,1.1182,0.13072,8.5539,1.19E-17,{"v":4.57e-16,"d":"4.57E-16"},"pentatricopeptide (PPR) repeat-containing protein.","AT5G14840",null,557.78,1.2283,0.15434,7.9583,{"v":1.74e-15,"d":"1.74E-15"},{"v":6.68e-14,"d":"6.68E-14"},"pseudogene. pseudogene of unknown protein","AT2G20560","DNAJ",443.44,4.0723,0.60394,6.7428,{"v":1.55e-11,"d":"1.55E-11"},{"v":5.83e-10,"d":"5.83E-10"},"DNAJ heat shock family protein."]
["AT4G04840","MSRB6",479.49,-2.1661,0.25378,-8.5356,{"v":1.39e-17,"d":"1.39E-17"},{"v":5.35e-16,"d":"5.35E-16"},"full_name=methionine sulfoxide reductase B6. methionine sulfoxide reductase B6.","AT4G15490","UGT84A3",262.61,-1.6696,0.21007,-7.9478,{"v":1.9e-15,"d":"1.90E-15"},{"v":7.25e-14,"d":"7.25E-14"},"UDP-Glycosyltransferase superfamily protein. Encodes a protein that might have sinapic acid:UDP-glucose glucosyltransferase activity.","AT3G21070","NADK1",358.82,1.4404,0.21368,6.7408,1.58E-11,{"v":5.9e-10,"d":"5.90E-10"},"full_name=NAD kinase 1. NAD kinase 1. Encodes a protein with NAD(H) kinase activity."]
["AT5G62800",null,279.53,-2.2965,0.26909,-8.5346,1.41E-17,{"v":5.39e-16,"d":"5.39E-16"},"Protein with RING/U-box and TRAF-like domain.","AT3G54050","HCEF1",796.76,1.0805,0.13608,7.94,{"v":2.02e-15,"d":"2.02E-15"},{"v":7.71e-14,"d":"7.71E-14"},"full_name=high cyclic electron flow 1. high cyclic electron flow 1. Encodes a chloroplastic fructose 1,6-bisphosphate phosphatase. also known as HCEF1 (High Cyclic Electron Flow 1). hcef1 mutants have constitutively elevated electron flow (CEFI) and plants with antisense suppression of this enzyme have higher levels of net leaf photosynthesis and increased sucrose biosynthesis.","AT3G23390","RPL36AA",1251.3,-0.94517,0.14029,-6.7375,{"v":1.61e-11,"d":"1.61E-11"},{"v":6.02e-10,"d":"6.02E-10"},"Zinc-binding ribosomal protein family protein."]
["AT1G29680",null,371.27,-2.234,0.26179,-8.5335,{"v":1.42e-17,"d":"1.42E-17"},{"v":5.43e-16,"d":"5.43E-16"},"histone acetyltransferase (DUF1264).","AT1G70810","CAR7",146.09,-2.3339,0.29402,-7.938,{"v":2.05e-15,"d":"2.05E-15"},{"v":7.82e-14,"d":"7.82E-14"},"Calcium-dependent lipid-binding (CaLB domain) family protein.","AT5G19120",null,191.84,-2.363,0.35116,-6.7292,{"v":1.71e-11,"d":"1.71E-11"},{"v":6.36e-10,"d":"6.36E-10"},"Eukaryotic aspartyl protease family protein."]
["AT4G28520","CRU3",838020,-1.0053,0.11793,-8.5251,1.53E-17,{"v":5.82e-16,"d":"5.82E-16"},"full_name=cruciferin 3. cruciferin 3. Encodes a 12S seed storage protein that is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT1G78600","LZF1",498.46,-1.3513,0.17038,-7.9314,{"v":2.17e-15,"d":"2.17E-15"},{"v":8.22e-14,"d":"8.22E-14"},"full_name=light-regulated zinc finger protein 1. light-regulated zinc finger protein 1.","AT1G33050",null,840.53,1.15,0.17091,6.7289,{"v":1.71e-11,"d":"1.71E-11"},{"v":6.36e-10,"d":"6.36E-10"},"hypothetical protein."]
["AT4G36700",null,6728.1,-4.4767,0.52548,-8.5194,{"v":1.6e-17,"d":"1.60E-17"},{"v":6.11e-16,"d":"6.11E-16"},"RmlC-like cupins superfamily protein.","AT3G08640","RER3",827.85,-1.0748,0.13551,-7.9314,{"v":2.17e-15,"d":"2.17E-15"},{"v":8.22e-14,"d":"8.22E-14"},"alphavirus core family protein (DUF3411).","AT1G78610","MSL6",674.39,1.2484,0.18553,6.7288,{"v":1.71e-11,"d":"1.71E-11"},{"v":6.36e-10,"d":"6.36E-10"},"full_name=mechanosensitive channel of small conductance-like 6. mechanosensitive channel of small conductance-like 6."]
["AT1G54860",null,1311.1,-3.4561,0.40637,-8.5049,{"v":1.82e-17,"d":"1.82E-17"},{"v":6.9e-16,"d":"6.90E-16"},"Glycoprotein membrane precursor GPI-anchored.","AT2G46330","AGP16",474.59,1.2557,0.15837,7.929,2.21E-15,{"v":8.36e-14,"d":"8.36E-14"},"full_name=arabinogalactan protein 16. arabinogalactan protein 16. Encodes arabinogalactan protein (AGP16).","AT3G16400","NSP1",4461.9,-0.80969,0.12034,-6.7285,{"v":1.71e-11,"d":"1.71E-11"},{"v":6.36e-10,"d":"6.36E-10"},"full_name=nitrile specifier protein 1. nitrile specifier protein 1. Encodes a nitrile-specifier protein NSP1 responsible for constitutive and herbivore-induced simple nitrile formation in rosette leaves. NSP1 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation."]
["AT5G56870","BGAL4",101.11,-3.223,0.37928,-8.4976,{"v":1.94e-17,"d":"1.94E-17"},7.34E-16,"full_name=beta-galactosidase 4. beta-galactosidase 4.","AT5G07220","BAG3",345.16,-1.7139,0.21688,-7.9026,{"v":2.73e-15,"d":"2.73E-15"},1.03E-13,"full_name=BCL-2-associated athanogene 3. BCL-2-associated athanogene 3. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.","AT1G17210","ILP1",1217.2,1.0674,0.15881,6.7213,{"v":1.8e-11,"d":"1.80E-11"},{"v":6.66e-10,"d":"6.66E-10"},"full_name=IAP-like protein 1. IAP-like protein 1."]
["AT5G19510",null,8565.9,0.72394,0.085206,8.4963,1.96E-17,{"v":7.4e-16,"d":"7.40E-16"},"Translation elongation factor EF1B/ribosomal protein S6 family protein.","AT4G15560","CLA1",924.55,1.0204,0.12914,7.9017,{"v":2.75e-15,"d":"2.75E-15"},1.04E-13,"full_name=CLOROPLASTOS ALTERADOS 1. Deoxyxylulose-5-phosphate synthase. Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis","AT4G14960","TUA6",3221.3,-0.93859,0.13967,-6.7203,{"v":1.81e-11,"d":"1.81E-11"},{"v":6.7e-10,"d":"6.70E-10"},"full_name=Tubulin alpha-6. Tubulin/FtsZ family protein. Encodes an alpha-tubulin isoform required for right handed helical growth."]
["AT5G43700","ATAUX2-11",974.3,0.99609,0.11733,8.4897,{"v":2.07e-17,"d":"2.07E-17"},{"v":7.82e-16,"d":"7.82E-16"},"full_name=AUXIN INDUCIBLE 2-11. AUX/IAA transcriptional regulator family protein. Auxin inducible protein similar to transcription factors.","AT2G23090",null,2131.5,-0.84555,0.10705,-7.8984,{"v":2.83e-15,"d":"2.83E-15"},1.06E-13,"Uncharacterized protein family SERF.","AT1G33700",null,58.883,3.2729,0.48738,6.7154,{"v":1.88e-11,"d":"1.88E-11"},{"v":6.91e-10,"d":"6.91E-10"},"Beta-glucosidase, GBA2 type family protein."]
["AT1G47980",null,364.84,-1.6855,0.1987,-8.4823,{"v":2.21e-17,"d":"2.21E-17"},{"v":8.32e-16,"d":"8.32E-16"},"desiccation-like protein.","AT3G06300","P4H2",244.33,1.6384,0.20758,7.8928,{"v":2.95e-15,"d":"2.95E-15"},{"v":1.11e-13,"d":"1.11E-13"},"full_name=prolyl 4-hydroxylase 2. P4H isoform 2. Encodes a prolyl-4 hydroxylase that can hydroxylate poly(L-proline)and other proline rich peptides, including those with sequences corresponding to those in arabinogalactan proteins and extensins.","AT4G11280","ACS6",53.944,3.5444,0.52821,6.7102,{"v":1.94e-11,"d":"1.94E-11"},{"v":7.15e-10,"d":"7.15E-10"},"full_name=1-aminocyclopropane-1-carboxylic acid (acc) synthase 6. 1-aminocyclopropane-1-carboxylic acid (acc) synthase 6. encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family"]
["AT5G47110","LIL3:2",2194,0.89113,0.10511,8.4783,{"v":2.28e-17,"d":"2.28E-17"},{"v":8.59e-16,"d":"8.59E-16"},"Chlorophyll A-B binding family protein.","AT5G12940",null,122.29,2.4478,0.31033,7.8877,3.08E-15,{"v":1.15e-13,"d":"1.15E-13"},"Leucine-rich repeat (LRR) family protein.","AT1G67365",null,156.02,2.0933,0.31219,6.7052,2.01E-11,{"v":7.38e-10,"d":"7.38E-10"},"Natural antisense transcript overlaps with AT1G67370. Potential natural antisense gene, locus overlaps with AT1G67370 Natural antisense transcript overlaps with AT1G67370"]
["AT5G52230","MBD13",589.46,-1.5496,0.18286,-8.4743,{"v":2.36e-17,"d":"2.36E-17"},{"v":8.87e-16,"d":"8.87E-16"},"full_name=methyl-CPG-binding domain protein 13. methyl-CPG-binding domain protein 13. Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.","AT3G44880","ACD1",558.17,-1.4652,0.18603,-7.8765,{"v":3.37e-15,"d":"3.37E-15"},{"v":1.26e-13,"d":"1.26E-13"},"full_name=ACCELERATED CELL DEATH 1. Pheophorbide a oxygenase family protein with Rieske 2Fe-2S domain-containing protein. Encodes a pheide a oxygenase (PAO). Accelerated cell death (acd1) mutants show rapid, spreading necrotic responses to both virulent and avirulent Pseudomonas syringae pv. maculicola or pv. tomato pathogens and to ethylene.","AT1G29340","PUB17",441.05,1.2663,0.18894,6.702,{"v":2.06e-11,"d":"2.06E-11"},{"v":7.53e-10,"d":"7.53E-10"},"full_name=plant U-box 17. plant U-box 17. Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity. It is required for cell death and full resistance specified by Arabidopsis RPM1 and RPS4 resistance proteins against Pseudomonas syringae pv tomato."]
["AT1G51060","HTA10",353.2,1.5393,0.18164,8.4741,{"v":2.37e-17,"d":"2.37E-17"},{"v":8.87e-16,"d":"8.87E-16"},"full_name=histone H2A 10. histone H2A 10. Encodes HTA10, a histone H2A protein.","AT1G23200","HMS",121.9,-6.9247,0.8792,-7.8762,{"v":3.38e-15,"d":"3.38E-15"},{"v":1.26e-13,"d":"1.26E-13"},"Plant invertase/pectin methylesterase inhibitor superfamily. Encodes a pectin methyl esterase involved in embryo development.","AT2G01570","RGA1",424.35,-1.3626,0.20336,-6.7005,{"v":2.08e-11,"d":"2.08E-11"},{"v":7.59e-10,"d":"7.59E-10"},"full_name=REPRESSOR OF GA1-3 1. GRAS family transcription factor family protein. Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development."]
["AT2G44260",null,374.74,-1.5032,0.17763,-8.4623,{"v":2.62e-17,"d":"2.62E-17"},{"v":9.8e-16,"d":"9.80E-16"},"DUF946 family protein (DUF946).","AT5G05890","UGT76C5",321.9,1.4815,0.18826,7.8699,{"v":3.55e-15,"d":"3.55E-15"},{"v":1.32e-13,"d":"1.32E-13"},"UDP-Glycosyltransferase superfamily protein.","AT3G02790","MBS1",446.96,-1.2748,0.19051,-6.6916,2.21E-11,{"v":8.04e-10,"d":"8.04E-10"},"zinc finger (C2H2 type) family protein."]
["AT1G11840","GLX1",23422,-0.61061,0.072193,-8.458,2.72E-17,1.01E-15,"full_name=glyoxalase I homolog. glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein. Encodes a glyoxalase I homolog ATGLX1.","AT1G54575",null,332.66,-1.5236,0.1936,-7.8698,{"v":3.55e-15,"d":"3.55E-15"},{"v":1.32e-13,"d":"1.32E-13"},"hypothetical protein.","AT1G44900","MCM2",231.31,-1.6188,0.24191,-6.6916,2.21E-11,{"v":8.04e-10,"d":"8.04E-10"},"full_name=MINICHROMOSOME MAINTENANCE 2. minichromosome maintenance (MCM2/3/5) family protein. Encodes MCM2 (MINICHROMOSOME MAINTENANCE 2), a protein essential to embryo development. Overexpression results in altered root meristem function."]
["AT4G36195",null,2616.5,-0.78033,0.092354,-8.4494,{"v":2.93e-17,"d":"2.93E-17"},1.09E-15,"Serine carboxypeptidase S28 family protein.","AT1G33750","TPS22",369.23,1.3752,0.17486,7.8643,{"v":3.71e-15,"d":"3.71E-15"},{"v":1.38e-13,"d":"1.38E-13"},"Terpenoid cyclases/Protein prenyltransferases superfamily protein.","AT4G26400","BTL05",439.83,1.2284,0.18374,6.6855,{"v":2.3e-11,"d":"2.30E-11"},{"v":8.35e-10,"d":"8.35E-10"},"RING/U-box superfamily protein."]
["AT1G07890","APX1",1458.4,0.96029,0.11372,8.444,{"v":3.07e-17,"d":"3.07E-17"},1.14E-15,"full_name=ascorbate peroxidase 1. ascorbate peroxidase 1. Encodes a cytosolic ascorbate peroxidase APX1. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.","AT2G44260",null,80.046,-3.8211,0.48595,-7.8631,{"v":3.75e-15,"d":"3.75E-15"},{"v":1.39e-13,"d":"1.39E-13"},"DUF946 family protein (DUF946).","AT2G18280","TLP2",1529.9,0.89866,0.13442,6.6855,{"v":2.3e-11,"d":"2.30E-11"},{"v":8.35e-10,"d":"8.35E-10"},"full_name=tubby like protein 2. tubby like protein 2. Member of TLP family"]
["AT5G62100","BAG2",341.08,-2.0164,0.23904,-8.4354,{"v":3.3E-17,"d":"3.30E-17"},{"v":1.22e-15,"d":"1.22E-15"},"full_name=BCL-2-associated athanogene 2. BCL-2-associated athanogene 2. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.","AT5G45950",null,60.97,6.0654,0.77214,7.8553,{"v":3.99e-15,"d":"3.99E-15"},1.47E-13,"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT5G03858",null,69.335,2.9801,0.44591,6.6832,{"v":2.34e-11,"d":"2.34E-11"},{"v":8.46e-10,"d":"8.46E-10"},"pseudogene. Pseudogene of AT5G03960; IQD12 (IQ-domain 12); calmodulin binding protein"]
["AT5G38195",null,107.4,-3.6835,0.43675,-8.4338,{"v":3.35e-17,"d":"3.35E-17"},1.24E-15,"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT3G15500","NAC3",148.9,-2.4375,0.31117,-7.8335,{"v":4.74e-15,"d":"4.74E-15"},{"v":1.75e-13,"d":"1.75E-13"},"full_name=NAC domain containing protein 3. NAC domain containing protein 3. Encodes an ATAF-like NAC-domain transcription factor that doesn't contain C-terminal sequences shared by CUC1, CUC2 and NAM. Note: this protein (AtNAC3) is not to be confused with the protein encoded by locus AT3G29035, which, on occasion, has also been referred to as AtNAC3.","AT1G18460","ALPHA/BETA-HYDROLASE",263.93,1.4846,0.22216,6.6827,2.35E-11,{"v":8.47e-10,"d":"8.47E-10"},"alpha/beta-Hydrolases superfamily protein."]
["AT1G04770","SDI2",1302,1.5216,0.18045,8.4322,3.39E-17,1.25E-15,"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT5G64260","EXL2",637.7,-1.5219,0.19435,-7.8306,{"v":4.86e-15,"d":"4.86E-15"},{"v":1.79e-13,"d":"1.79E-13"},"full_name=EXORDIUM like 2. EXORDIUM like 2.","AT5G67070","RALFL34",470.52,-1.4308,0.21421,-6.6792,{"v":2.4e-11,"d":"2.40E-11"},8.67E-10,"full_name=ralf-like 34. ralf-like 34. Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide."]
["AT3G23920","BAM1",2181.6,0.9898,0.11739,8.4316,{"v":3.41e-17,"d":"3.41E-17"},1.26E-15,"full_name=beta-amylase 1. beta-amylase 1. Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.","AT1G47960","C/VIF1",595.18,-1.4027,0.17915,-7.8299,{"v":4.88e-15,"d":"4.88E-15"},{"v":1.79e-13,"d":"1.79E-13"},"full_name=cell wall / vacuolar inhibitor of fructosidase 1. cell wall / vacuolar inhibitor of fructosidase 1. Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. This protein may inhibit their activity.","AT3G54590","HRGP1",182.59,2.4263,0.36351,6.6745,{"v":2.48e-11,"d":"2.48E-11"},{"v":8.93e-10,"d":"8.93E-10"},"full_name=hydroxyproline-rich glycoprotein. hydroxyproline-rich glycoprotein. Encodes a hydroxyproline-rich glycoprotein."]
["AT5G09650","PPa6",893.22,1.0944,0.12991,8.4246,{"v":3.62e-17,"d":"3.62E-17"},{"v":1.33e-15,"d":"1.33E-15"},"full_name=pyrophosphorylase 6. pyrophosphorylase 6. Encodes a protein with inorganic pyrophosphatase activity.","AT4G25810","XTR6",78.883,-4.0943,0.52386,-7.8157,{"v":5.47e-15,"d":"5.47E-15"},{"v":2e-13,"d":"2.00E-13"},"full_name=xyloglucan endotransglycosylase 6. xyloglucan endotransglycosylase 6. xyloglucan endotransglycosylase-related protein (XTR6)","AT4G13010","CEQORH",528.79,1.1378,0.17076,6.663,{"v":2.68e-11,"d":"2.68E-11"},{"v":9.64e-10,"d":"9.64E-10"},"Oxidoreductase, zinc-binding dehydrogenase family protein."]
["AT1G26230","Cpn60beta4",141.07,2.6765,0.31792,8.4188,{"v":3.8e-17,"d":"3.80E-17"},{"v":1.4e-15,"d":"1.40E-15"},"full_name=chaperonin-60beta4. TCP-1/cpn60 chaperonin family protein. Encodes a subunit of chloroplasts chaperonins that are involved in mediating the folding of newly synthesized, translocated, or stress-denatured proteins. Cpn60 subunits are: Cpn60alpha1 (At2g28000), AtCpn60alpha2 (At5g18820), AtCpn60beta1 (At1g55490), AtCpn60beta2 (At3g13470), AtCpn60beta3 (At5g56500), AtCpn60beta4 (At1g26230).","AT5G61130","PDCB1",224.9,1.9884,0.2549,7.8007,{"v":6.16e-15,"d":"6.16E-15"},2.25E-13,"full_name=plasmodesmata callose-binding protein 1. plasmodesmata callose-binding protein 1. Encodes a plasmodesmatal localized protein with callose binding activity. The function of PDCB1 is unknown but overexpression leads to the hyperaccumulation of callose.","AT5G19550","ASP2",1300,0.96063,0.1442,6.662,{"v":2.7E-11,"d":"2.70E-11"},{"v":9.69e-10,"d":"9.69E-10"},"full_name=aspartate aminotransferase 2. aspartate aminotransferase 2. Nitrogen metabolism. Major cytosolic isoenzyme controlling aspartate biosynthesis in the light."]
["AT5G66880","SNRK2.3",1370.2,1.144,0.1359,8.4177,{"v":3.84e-17,"d":"3.84E-17"},1.41E-15,"full_name=sucrose nonfermenting 1(SNF1)-related protein kinase 2.3. sucrose nonfermenting 1(SNF1)-related protein kinase 2.3. encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Enzyme involved in the ABA signaling during seed germination, dormancy and seedling growth.","AT5G57560","TCH4",534.98,-1.4428,0.18518,-7.7913,{"v":6.63e-15,"d":"6.63E-15"},{"v":2.42e-13,"d":"2.42E-13"},"full_name=Touch 4. Xyloglucan endotransglucosylase/hydrolase family protein. Encodes a cell wall-modifying enzyme, rapidly upregulated in response to environmental stimuli","AT1G19660","BBD2",654.44,1.0847,0.16284,6.6614,{"v":2.71e-11,"d":"2.71E-11"},{"v":9.7e-10,"d":"9.70E-10"},"Wound-responsive family protein."]
["AT2G22620","RGIL6",210.78,-2.028,0.24118,-8.4088,{"v":4.14e-17,"d":"4.14E-17"},{"v":1.51e-15,"d":"1.51E-15"},"Rhamnogalacturonate lyase family protein.","AT5G52640","HSP90.1",200.06,-1.9651,0.25222,-7.7912,{"v":6.64e-15,"d":"6.64E-15"},{"v":2.42e-13,"d":"2.42E-13"},"full_name=heat shock protein 90.1. heat shock-like protein. Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance.","AT3G46600",null,732.96,1.1783,0.17701,6.6566,{"v":2.8E-11,"d":"2.80E-11"},{"v":1e-09,"d":"1.00E-09"},"GRAS family transcription factor."]
["AT5G63350","AITR6",1236.1,-1.6282,0.19363,-8.4086,{"v":4.15e-17,"d":"4.15E-17"},{"v":1.51e-15,"d":"1.51E-15"},"von willebrand factor A domain protein.","AT1G62333",null,87.509,-5.4001,0.69316,-7.7906,{"v":6.67e-15,"d":"6.67E-15"},{"v":2.43e-13,"d":"2.43E-13"},"hypothetical protein.","AT4G13250","NYC1",458.08,1.1883,0.17852,6.6564,{"v":2.81e-11,"d":"2.81E-11"},{"v":1e-09,"d":"1.00E-09"},"full_name=NON-YELLOW COLORING 1. NAD(P)-binding Rossmann-fold superfamily protein. Encodes a chlorophyll b reductase involved in the degradation of chlorophyll b and LHCII (light harvesting complex II)."]
["AT1G06390","GSK1",918.71,-1.0151,0.12075,-8.4066,4.22E-17,1.54E-15,"full_name=GSK3/SHAGGY-like protein kinase 1. GSK3/SHAGGY-like protein kinase 1. encodes a GSK3/shaggy-like protein kinase. Gene expression is induced by NaCl and ABA but not KCl, suggesting that this gene may be involved in response to osmotic stress. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts.","AT5G52450",null,409.94,-1.3356,0.17165,-7.781,{"v":7.19e-15,"d":"7.19E-15"},2.61E-13,"MATE efflux family protein.","AT1G74940",null,79.06,-3.1765,0.47722,-6.6561,{"v":2.81e-11,"d":"2.81E-11"},{"v":1e-09,"d":"1.00E-09"},"cyclin-dependent kinase, putative (DUF581)."]
["AT5G25350","EBF2",2272.8,0.85125,0.10135,8.3992,{"v":4.5e-17,"d":"4.50E-17"},1.64E-15,"full_name=EIN3-binding F box protein 2. EIN3-binding F box protein 2. Arabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway.","AT2G24300",null,164.86,1.9469,0.25047,7.7731,{"v":7.66e-15,"d":"7.66E-15"},{"v":2.78e-13,"d":"2.78E-13"},"Calmodulin-binding protein.","AT2G22010","RKP",473.21,1.1653,0.17511,6.6546,2.84E-11,{"v":1.01E-9,"d":"1.01E-09"},"full_name=related to KPC1. related to KPC1. Encodes a protein predicted to act as a RING E3 ubiquitin ligase. It appears to regulate the stability of the KRP1/ICK1 cyclin dependent kinase inhibitor. Induced by beet severe curly virus (BSCTV) C4 protein."]
["AT2G23120",null,2481,-0.81368,0.09689,-8.398,{"v":4.54e-17,"d":"4.54E-17"},1.65E-15,"Late embryogenesis abundant protein, group 6.","AT1G13360",null,708.52,-1.5599,0.20094,-7.7632,{"v":8.28e-15,"d":"8.28E-15"},{"v":3e-13,"d":"3.00E-13"},"hypothetical protein.","AT3G04240","SEC",1141,1.0546,0.15853,6.6521,{"v":2.89e-11,"d":"2.89E-11"},{"v":1.02E-9,"d":"1.02E-09"},"full_name=secret agent. Tetratricopeptide repeat (TPR)-like superfamily protein. Has O-linked N-acetyl glucosamine transferase activity. Similar to Arabidopsis SPY gene."]
["AT5G50790","SWEET10",1176,-1.9794,0.23576,-8.3956,{"v":4.63e-17,"d":"4.63E-17"},{"v":1.68e-15,"d":"1.68E-15"},"Nodulin MtN3 family protein. Encodes a member of the SWEET sucrose efflux transporter family proteins.","AT2G19800","MIOX2",363.04,1.5897,0.20489,7.7589,8.57E-15,3.09E-13,"full_name=myo-inositol oxygenase 2. myo-inositol oxygenase 2. Encodes a myo-inositol oxygenase family gene.","AT5G16880",null,963.82,1.2582,0.18934,6.6451,{"v":3.03e-11,"d":"3.03E-11"},{"v":1.07E-9,"d":"1.07E-09"},"Target of Myb protein 1."]
["AT4G33150","LKR",5794.5,-0.6752,0.080432,-8.3946,4.67E-17,1.69E-15,"lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme. Encodes two proteins. One protein is the monofunctional saccharopine dehydrogenase involved in lysine degradation. The longer protein from the same LKR/SDH locus is bifunctional and also has saccharopine dehydrogenase activity. The monofunctional SDH functions mainly to enhance the flux of lysine catabolism. Gene expression is induced by abscisic acid, jasmonate, and under sucrose starvation.","AT1G11580","PMEPCRA",1682.1,1.2637,0.16293,7.756,{"v":8.76e-15,"d":"8.76E-15"},{"v":3.16e-13,"d":"3.16E-13"},"full_name=methylesterase PCR A. methylesterase PCR A.","AT5G60670","RPL12C",773.53,-1.3424,0.20204,-6.6445,3.04E-11,{"v":1.07E-9,"d":"1.07E-09"},"Ribosomal protein L11 family protein."]
["AT5G64190",null,626.33,-1.3231,0.15766,-8.3923,{"v":4.77e-17,"d":"4.77E-17"},{"v":1.72e-15,"d":"1.72E-15"},"neuronal PAS domain protein.","AT4G25570","ACYB-2",547.23,1.1905,0.15362,7.7495,{"v":9.22e-15,"d":"9.22E-15"},3.32E-13,"Cytochrome b561/ferric reductase transmembrane protein family. Encodes cytochrome b561.","AT5G45630",null,48.021,4.0251,0.60596,6.6425,3.08E-11,{"v":1.09E-9,"d":"1.09E-09"},"senescence regulator (Protein of unknown function, DUF584)."]
["AT1G78780",null,622.26,1.1552,0.13785,8.3801,5.29E-17,{"v":1.91e-15,"d":"1.91E-15"},"pathogenesis-related family protein.","AT1G61790","OST3/6",709.76,1.103,0.1425,7.7404,{"v":9.91e-15,"d":"9.91E-15"},3.56E-13,"Oligosaccharyltransferase complex/magnesium transporter family protein.","AT1G48090",null,883.09,1.077,0.16217,6.6414,{"v":3.11e-11,"d":"3.11E-11"},{"v":1.09E-9,"d":"1.09E-09"},"calcium-dependent lipid-binding family protein."]
["AT3G17390","MTO3",3474,0.79272,0.094615,8.3783,{"v":5.37e-17,"d":"5.37E-17"},{"v":1.93e-15,"d":"1.93E-15"},"full_name=METHIONINE OVER-ACCUMULATOR 3. S-adenosylmethionine synthetase family protein. S-adenosylmethionine synthetase","AT2G26910","ABCG32",548.1,1.1971,0.15467,7.7398,{"v":9.96e-15,"d":"9.96E-15"},{"v":3.57e-13,"d":"3.57E-13"},"full_name=ATP-binding cassette G32. pleiotropic drug resistance 4. Encodes a member of the PLEIOTROPIC DRUG RESISTANCE family of ATP binding cassette transporters. Required for the formation of a functional cuticle.","AT4G11110","SPA2",764.07,1.0709,0.16125,6.6412,{"v":3.11e-11,"d":"3.11E-11"},{"v":1.09E-9,"d":"1.09E-09"},"full_name=SPA1-related 2. SPA1-related 2. Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants."]
["AT3G13520","AGP12",460.36,-1.3405,0.16001,-8.3773,5.41E-17,1.94E-15,"full_name=arabinogalactan protein 12. arabinogalactan protein 12. Encodes a GPI-anchored arabinogalactan (AG) peptide with a short 'classical' backbone of 10 amino acids, seven of which are conserved among the 4 other Arabidopsis AG peptides. These peptides may be involved in cell signaling.","AT3G57780",null,643.37,-1.2504,0.16168,-7.7339,1.04E-14,{"v":3.73e-13,"d":"3.73E-13"},"nucleolar-like protein.","AT2G34770","FAH1",682.03,1.3985,0.21069,6.6378,{"v":3.18e-11,"d":"3.18E-11"},{"v":1.12e-09,"d":"1.12E-09"},"full_name=fatty acid hydroxylase 1. fatty acid hydroxylase 1. encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death."]
["AT5G04290","KTF1",1549.8,-0.90332,0.10791,-8.3709,{"v":5.72e-17,"d":"5.72E-17"},{"v":2.05e-15,"d":"2.05E-15"},"full_name=kow domain-containing transcription factor 1. kow domain-containing transcription factor 1. Encodes SPT5-Like, a member of the nuclear SPT5 (Suppressor of Ty insertion 5) RNA polymerase (RNAP) elongation factor family that is characterized by the presence of a carboxy-terminal extension with more than 40 WG/GW motifs. Interacts with AGO4. Required for RNA-directed DNA methylation.","AT5G19940","FBN6",815.18,1.0429,0.13494,7.7287,1.09E-14,{"v":3.88e-13,"d":"3.88E-13"},"Plastid-lipid associated protein PAP / fibrillin family protein.","AT3G14990","DJ1A",393.86,1.2493,0.18846,6.629,{"v":3.38e-11,"d":"3.38E-11"},{"v":1.18e-09,"d":"1.18E-09"},"full_name=DJ-1 homolog A. Class I glutamine amidotransferase-like superfamily protein. Encodes a homolog of animal DJ-1 superfamily protein. In the A. thaliana genome, three genes encoding close homologs of human DJ-1 were identified AT3G14990 (DJ1A), AT1G53280 (DJ1B) and AT4G34020 (DJ1C). Among the three homologs, DJ1C is essential for chloroplast development and viability. It exhibits glyoxalase activity towards glyoxal and methylglyoxal."]
["AT5G28060","RPS24B",4420.2,0.70422,0.084221,8.3616,{"v":6.19e-17,"d":"6.19E-17"},2.21E-15,"Ribosomal protein S24e family protein.","AT5G67490","SDHAF4",656.3,-1.6613,0.21511,-7.723,{"v":1.14e-14,"d":"1.14E-14"},{"v":4.05e-13,"d":"4.05E-13"},"succinate dehydrogenase assembly factor.","AT5G05750",null,435.35,1.2276,0.1853,6.6249,{"v":3.48e-11,"d":"3.48E-11"},{"v":1.21E-9,"d":"1.21E-09"},"DNAJ heat shock N-terminal domain-containing protein."]
["AT5G54060","UF3GT",89.862,4.1163,0.49229,8.3615,{"v":6.19e-17,"d":"6.19E-17"},2.21E-15,"full_name=UDP-glucose:flavonoid 3-o-glucosyltransferase. UDP-glucose:flavonoid 3-o-glucosyltransferase. Encodes a anthocyanin 3-O-glucoside: 2-O-xylosyl-transferase involved in anthocyanin modification that converts cyanidin 3-O-glucoside to cyanidin 3-O-xylosyl(1->2)glucoside. Its preferred sugar donor is UDP-xylose.","AT2G39310","JAL22",88.448,2.9482,0.3818,7.7218,1.15E-14,{"v":4.08e-13,"d":"4.08E-13"},"full_name=jacalin-related lectin 22. jacalin-related lectin 22.","AT1G08890",null,415.94,1.345,0.20321,6.6188,{"v":3.62e-11,"d":"3.62E-11"},{"v":1.26E-9,"d":"1.26E-09"},"Major facilitator superfamily protein."]
["AT5G22650","HD2B",5696.8,0.65686,0.078586,8.3584,{"v":6.36e-17,"d":"6.36E-17"},2.26E-15,"full_name=histone deacetylase 2B. histone deacetylase 2B. Encodes a member of a plant-specific class of histone deacetylases. Controls the development of adaxial/abaxial leaf polarity. Its mRNA is widely expressed in stems, leaves, flowers and young siliques. Plant lines expressing RNAi constructs directed against this gene showed a marked reduction in agrobacterium-mediated root transformation.","AT2G30570","PSBW",1714.2,0.99737,0.12923,7.7178,{"v":1.18e-14,"d":"1.18E-14"},{"v":4.2e-13,"d":"4.20E-13"},"full_name=photosystem II reaction center W. photosystem II reaction center W. Encodes PsbW, a protein similar to photosystem II reaction center subunit W. Loss of PsbW destabilizes the supramolecular organization of PSII.","AT4G03280","PETC",2740.4,0.8327,0.12593,6.6126,{"v":3.78e-11,"d":"3.78E-11"},{"v":1.31E-9,"d":"1.31E-09"},"full_name=photosynthetic electron transfer C. photosynthetic electron transfer C. Encodes the Rieske FeS center of cytochrome b6f complex. Gene is expressed in shoot but not in root. Mutant has reduced electron transport at saturating light intensities and Q-cycle activity is hypersensitive to acidification of the thylakoid lumen."]
["AT3G45310",null,2156,1.1662,0.1397,8.348,{"v":6.94e-17,"d":"6.94E-17"},{"v":2.47e-15,"d":"2.47E-15"},"Cysteine proteinases superfamily protein.","AT3G23175",null,63.18,3.5977,0.46634,7.7149,1.21E-14,{"v":4.29e-13,"d":"4.29E-13"},"HR-like lesion-inducing protein-like protein.","AT1G14740","TTA1",1122.9,1.0441,0.15794,6.6104,3.83E-11,{"v":1.33E-9,"d":"1.33E-09"},"full_name=TITANIA 1. class I heat shock protein, putative (DUF1423). Encodes a PHD-finger protein that, with TTA1, is redundantly required for MP-dependent embryonic root meristem initiation."]
["AT2G40370","LAC5",751.1,-2.0365,0.2443,-8.3359,{"v":7.69e-17,"d":"7.69E-17"},{"v":2.73e-15,"d":"2.73E-15"},"full_name=laccase 5. laccase 5. putative laccase, a member of laccase family of genes (17 members in Arabidopsis).","AT5G53970","TAT7",271.56,-1.9869,0.25769,-7.7104,1.25E-14,{"v":4.43e-13,"d":"4.43E-13"},"full_name=tyrosine aminotransferase 7. Tyrosine transaminase family protein. encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment","AT1G56510","WRR4",181.83,1.7043,0.25783,6.6103,3.83E-11,{"v":1.33E-9,"d":"1.33E-09"},"full_name=WHITE RUST RESISTANCE 4. Disease resistance protein (TIR-NBS-LRR class). TIR-NB-LRR protein that confers resistance to four races of Albugo candida."]
["AT5G20960","AO1",3037.7,-0.79554,0.095462,-8.3336,{"v":7.84e-17,"d":"7.84E-17"},{"v":2.78e-15,"d":"2.78E-15"},"full_name=aldehyde oxidase 1. aldehyde oxidase 1. Encodes aldehyde oxidase AA01.","AT1G19540",null,245.49,-1.9084,0.24787,-7.6991,{"v":1.37e-14,"d":"1.37E-14"},{"v":4.84e-13,"d":"4.84E-13"},"NmrA-like negative transcriptional regulator family protein.","AT4G37910","mtHsc70-1",1266.1,-0.9698,0.14691,-6.6015,{"v":4.07e-11,"d":"4.07E-11"},{"v":1.41e-09,"d":"1.41E-09"},"full_name=mitochondrial heat shock protein 70-1. mitochondrial heat shock protein 70-1."]
["AT5G39130",null,217.04,-2.0384,0.2449,-8.3233,{"v":8.55e-17,"d":"8.55E-17"},{"v":3.02e-15,"d":"3.02E-15"},"RmlC-like cupins superfamily protein.","AT4G34050","CCoAOMT1",1089.5,-1.1505,0.14966,-7.688,{"v":1.5e-14,"d":"1.50E-14"},{"v":5.27e-13,"d":"5.27E-13"},"full_name=caffeoyl coenzyme A O-methyltransferase 1. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT1G29970","RPL18AA",278.82,1.7963,0.27239,6.5948,4.26E-11,{"v":1.47e-09,"d":"1.47E-09"},"full_name=60S ribosomal protein L18A-1. 60S ribosomal protein L18A-1."]
["AT5G66470","ERA-1",465.55,1.4044,0.16875,8.3226,{"v":8.61e-17,"d":"8.61E-17"},{"v":3.04e-15,"d":"3.04E-15"},"GTP-binding protein Era-like protein.","AT3G10720",null,152.69,2.2531,0.29325,7.6834,1.55E-14,5.44E-13,"Plant invertase/pectin methylesterase inhibitor superfamily.","AT4G15910","DI21",10559,1.0124,0.15352,6.5948,4.26E-11,{"v":1.47e-09,"d":"1.47E-09"},"full_name=drought-induced 21. drought-induced 21. encodes a gene whose transcript level in root and leaves increases to progressive drought stress. The transcript level is also affected by changes of endogenous or exogenous abscisic acid level. It appears to be a member of plant-specific gene family that includes late embryo-abundant and zinc- IAA-induced proteins in other plants."]
["AT2G05100","LHCB2.1",276.25,-2.2069,0.26533,-8.3176,8.98E-17,{"v":3.16e-15,"d":"3.16E-15"},"full_name=photosystem II light harvesting complex gene 2.1. photosystem II light harvesting complex protein 2.1. Lhcb2.1 protein encoding a subunit of the light harvesting complex II. Member of a gene family with high degree of sequence similarity. Initially LHCB2.3 was considered as a separate gene but appears to be an allele of LHCB2.1.","AT5G58260","NdhN",149.72,2.1232,0.27639,7.6819,{"v":1.57e-14,"d":"1.57E-14"},{"v":5.5e-13,"d":"5.50E-13"},"full_name=NADH dehydrogenase-like complex N. oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor. Encodes subunit NDH-N of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly.","AT5G22000","RHF2A",1092.7,1.0454,0.15865,6.5889,{"v":4.43e-11,"d":"4.43E-11"},{"v":1.52e-09,"d":"1.52E-09"},"full_name=RING-H2 group F2A. RING-H2 group F2A. encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses."]
["AT4G23790","TBL24",312.84,-1.7803,0.21415,-8.3132,{"v":9.31e-17,"d":"9.31E-17"},{"v":3.27e-15,"d":"3.27E-15"},"full_name=TRICHOME BIREFRINGENCE-LIKE 24. TRICHOME BIREFRINGENCE-LIKE 24. Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT1G70410","BCA4",673.64,1.1952,0.15569,7.6768,{"v":1.63e-14,"d":"1.63E-14"},{"v":5.71e-13,"d":"5.71E-13"},"full_name=beta carbonic anhydrase 4. beta carbonic anhydrase 4. Encodes a putative beta-carbonic anhydrase betaCA4. Together with betaCA1 (At3g01500) regulates CO2-controlled stomatal movements in guard cells.","AT3G14360","ATOBL1",691.95,1.5118,0.22949,6.5876,{"v":4.47e-11,"d":"4.47E-11"},{"v":1.53e-09,"d":"1.53E-09"},"alpha/beta-Hydrolases superfamily protein."]
["AT5G07350","Tudor1",3299.9,-0.81835,0.098454,-8.3119,{"v":9.42e-17,"d":"9.42E-17"},{"v":3.3E-15,"d":"3.30E-15"},"full_name=TUDOR-SN protein 1. TUDOR-SN protein 1. RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.","AT3G61880","CYP78A9",84.52,-3.5447,0.4618,-7.676,{"v":1.64e-14,"d":"1.64E-14"},{"v":5.74e-13,"d":"5.74E-13"},"full_name=cytochrome p450 78a9. cytochrome p450 78a9. Encodes a cytochrome p450 monooxygenase. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis.","AT5G24120","SIGE",84.375,3.1074,0.47178,6.5866,{"v":4.5E-11,"d":"4.50E-11"},{"v":1.54e-09,"d":"1.54E-09"},"full_name=sigma factor E. sigma factor E. Encodes a specialized sigma factor that functions in regulation of plastid genes and is responsible for the light-dependent transcription at the psbD LRP. Activation of SIG5 is dependent upon blue light and mediated by cryptochromes."]
["AT5G67480","BT4",3897.4,-0.70978,0.085403,-8.3109,{"v":9.5e-17,"d":"9.50E-17"},{"v":3.33e-15,"d":"3.33E-15"},"full_name=BTB and TAZ domain protein 4. BTB and TAZ domain protein 4. BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.","AT3G25500","AFH1",435.66,1.2881,0.16801,7.6669,{"v":1.76e-14,"d":"1.76E-14"},6.15E-13,"full_name=formin homology 1. formin homology 1. Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event.","AT3G20210","DELTA-VPE",74.153,2.7147,0.41225,6.5851,{"v":4.55e-11,"d":"4.55E-11"},{"v":1.55E-9,"d":"1.55E-09"},"full_name=delta vacuolar processing enzyme. delta vacuolar processing enzyme. Encodes a vacuolar processing enzyme with caspase-1-like activity that is specifically expressed in inner integument of developing seeds. Mutants display abnormal seed coat development. It is speculated to be involved in cell death of limited cell layers, the purpose of which is to form a seed coat."]
["AT4G19160",null,808.6,1.2263,0.1476,8.3084,{"v":9.7e-17,"d":"9.70E-17"},{"v":3.39e-15,"d":"3.39E-15"},"transglutaminase family protein.","AT5G47330",null,127.4,2.2784,0.29733,7.6631,1.81E-14,{"v":6.32e-13,"d":"6.32E-13"},"alpha/beta-Hydrolases superfamily protein.","AT3G52870",null,427.21,1.2273,0.18645,6.5826,{"v":4.62e-11,"d":"4.62E-11"},{"v":1.58e-09,"d":"1.58E-09"},"IQ calmodulin-binding motif family protein."]
["AT2G21260",null,267.38,-1.7651,0.21275,-8.2968,1.07E-16,{"v":3.73e-15,"d":"3.73E-15"},"NAD(P)-linked oxidoreductase superfamily protein.","AT1G32920",null,345.48,-1.4768,0.19305,-7.6497,{"v":2.01e-14,"d":"2.01E-14"},{"v":7e-13,"d":"7.00E-13"},"hypothetical protein.","AT2G04780","FLA7",174.44,-1.7076,0.25946,-6.5814,{"v":4.66e-11,"d":"4.66E-11"},{"v":1.59e-09,"d":"1.59E-09"},"full_name=FASCICLIN-like arabinoogalactan 7. FASCICLIN-like arabinoogalactan 7. fasciclin-like arabinogalactan-protein 7 (Fla7)"]
["AT3G25760","AOC1",162.71,2.8093,0.33868,8.2949,1.09E-16,{"v":3.79e-15,"d":"3.79E-15"},"full_name=allene oxide cyclase 1. allene oxide cyclase 1. encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is induced during senescence, a process that involves jasmonic acid signalling pathway.","AT5G44417",null,63.501,6.0922,0.7968,7.6459,2.08E-14,{"v":7.2e-13,"d":"7.20E-13"},"pseudogene.","AT4G02890","UBQ14",1581.8,1.2358,0.18788,6.5777,{"v":4.78e-11,"d":"4.78E-11"},{"v":1.63E-9,"d":"1.63E-09"},"Ubiquitin family protein. Polyubiquitin gene containing 4 ubiquitin repeats."]
["AT4G29210","GGT4",366.02,1.8173,0.21953,8.2782,{"v":1.25e-16,"d":"1.25E-16"},{"v":4.35e-15,"d":"4.35E-15"},"full_name=gamma-glutamyl transpeptidase 4. gamma-glutamyl transpeptidase 4. The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in the vacuole and is most active in roots. The encoded enzyme is involved in the initial degradation of glutathione conjugates in this cell compartment. It is also induced by xenobiotics and contributes to xenobiotics metabolism. Note that conflicting nomenclature exists in the literature: At4g29210 is named as GGT3 in Plant J. 2007 Mar 49(5):878-88; At4g29210 is named as GGT4 and At1g69820 as GGT3 in Plant Physiol. 2007 Aug 144(4):1715-32.","AT1G45010",null,53.979,4.2194,0.55198,7.6443,{"v":2.1e-14,"d":"2.10E-14"},{"v":7.28e-13,"d":"7.28E-13"},"TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein.","AT1G08630","THA1",283.83,1.6447,0.25035,6.5698,{"v":5.04e-11,"d":"5.04E-11"},{"v":1.71e-09,"d":"1.71E-09"},"full_name=threonine aldolase 1. threonine aldolase 1. Encodes a threonine aldolase, involved in threonine degradation to glycine. Primarily expressed in seeds and seedlings."]
["AT3G15820","ROD1",235.06,-2.6628,0.32169,-8.2775,1.26E-16,{"v":4.37e-15,"d":"4.37E-15"},"full_name=REDUCED OLEATE DESATURATION 1. phosphatidic acid phosphatase-related / PAP2-like protein. Functions as phosphatidylcholine:diacylglycerol cholinephosphotransferase, a major reaction for the transfer of 18:1 into phosphatidylcholine for desaturation and also for the reverse transfer of 18:2 and 18:3 into the triacylglycerols synthesis pathway","AT2G45560","CYP76C1",600.86,-1.2383,0.16205,-7.6418,{"v":2.14e-14,"d":"2.14E-14"},{"v":7.41e-13,"d":"7.41E-13"},"full_name=cytochrome P450, family 76, subfamily C, polypeptide 1. cytochrome P450, family 76, subfamily C, polypeptide 1. cytochrome P450 monooxygenase","AT5G43630","TZP",351.05,1.674,0.25492,6.5668,{"v":5.14e-11,"d":"5.14E-11"},{"v":1.74E-9,"d":"1.74E-09"},"zinc knuckle (CCHC-type) family protein. Encodes a zinc knuckle protein that negatively regulates morning specific growth. The role of TZP in hypocotyl elongation was established through a QTL analysis of BayXSha RIL populations. The Bay-0 allele contains a deletion causing a frameshift mutation. TZP is under circadian control and acts to regulate morning-specific hypocotyl growth."]
["AT3G63490","EMB3126",2880.9,0.81806,0.098891,8.2724,{"v":1.31e-16,"d":"1.31E-16"},{"v":4.55e-15,"d":"4.55E-15"},"full_name=EMBRYO DEFECTIVE 3126. Ribosomal protein L1p/L10e family.","AT3G15260",null,779.14,-1.2845,0.16825,-7.6346,2.26E-14,7.81E-13,"Protein phosphatase 2C family protein.","AT3G09270","GSTU8",93.809,-2.4209,0.36896,-6.5614,{"v":5.33e-11,"d":"5.33E-11"},{"v":1.8E-9,"d":"1.80E-09"},"full_name=glutathione S-transferase TAU 8. glutathione S-transferase TAU 8. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002)."]
["AT5G40610","GPDHp",411.06,-1.994,0.24111,-8.27,{"v":1.34e-16,"d":"1.34E-16"},{"v":4.63e-15,"d":"4.63E-15"},"full_name=Glycerol-3-phosphate dehydrogenase plastidic. NAD-dependent glycerol-3-phosphate dehydrogenase family protein.","AT1G75830","LCR67",397.67,-1.9888,0.26051,-7.6344,2.27E-14,7.81E-13,"full_name=low-molecular-weight cysteine-rich 67. low-molecular-weight cysteine-rich 67. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","AT3G02230","RGP1",1564.2,-0.89818,0.13695,-6.5585,{"v":5.44e-11,"d":"5.44E-11"},{"v":1.83e-09,"d":"1.83E-09"},"full_name=reversibly glycosylated polypeptide 1. reversibly glycosylated polypeptide 1. RGP1 is a UDP-arabinose mutase that catalyzes the interconversion between the pyranose and furanose forms of UDP-L-arabinose. It appears to be required for proper cell wall formation. rgp1/rgp2 (at5g15650) double mutants have a male gametophyte lethal phenotype. RGP1 fusion proteins can be found in the cytosol and peripherally associated with the Golgi apparatus."]
["AT3G47800",null,1617.3,0.85406,0.10328,8.2693,1.35E-16,{"v":4.65e-15,"d":"4.65E-15"},"Galactose mutarotase-like superfamily protein.","AT3G16250","PnsB3",128.25,2.1724,0.28518,7.6176,{"v":2.58e-14,"d":"2.58E-14"},{"v":8.88e-13,"d":"8.88E-13"},"full_name=Photosynthetic NDH subcomplex B 3. NDH-dependent cyclic electron flow 1. encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP. Contains a 4Fe-4S cluster.","AT1G66280","BGLU22",1911.6,-0.87961,0.13412,-6.5583,{"v":5.44e-11,"d":"5.44E-11"},{"v":1.83e-09,"d":"1.83E-09"},"Glycosyl hydrolase superfamily protein."]
["AT1G72150","PATL1",2079.7,-1.3612,0.16473,-8.2627,{"v":1.42e-16,"d":"1.42E-16"},{"v":4.9e-15,"d":"4.90E-15"},"full_name=PATELLIN 1. PATELLIN 1. novel cell-plate-associated protein that is related in sequence to proteins involved in membrane trafficking in other eukaryotes","AT2G30766","FEP1",325.26,-2.2865,0.30035,-7.6127,2.68E-14,{"v":9.21e-13,"d":"9.21E-13"},"hypothetical protein.","AT4G30800",null,77.663,-2.5869,0.39448,-6.5577,{"v":5.47e-11,"d":"5.47E-11"},{"v":1.84e-09,"d":"1.84E-09"},"Nucleic acid-binding, OB-fold-like protein."]
["AT5G39050","PMAT1",465.84,1.3201,0.15981,8.2604,{"v":1.45e-16,"d":"1.45E-16"},{"v":4.99e-15,"d":"4.99E-15"},"full_name=phenolic glucoside malonyltransferase 1. HXXXD-type acyl-transferase family protein. Encodes a malonyltransferase that may play a role in phenolic xenobiotic detoxification.","AT5G65210","TGA1",326.91,-1.7185,0.22584,-7.6091,2.76E-14,{"v":9.46e-13,"d":"9.46E-13"},"full_name=TGACG sequence-specific binding protein 1. bZIP transcription factor family protein. Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.","AT2G36780",null,47.125,3.9949,0.60948,6.5546,{"v":5.58e-11,"d":"5.58E-11"},{"v":1.87E-9,"d":"1.87E-09"},"UDP-Glycosyltransferase superfamily protein."]
["AT3G56870",null,318.61,-1.5921,0.19275,-8.2598,{"v":1.46e-16,"d":"1.46E-16"},{"v":5.01e-15,"d":"5.01E-15"},"hypothetical protein.","AT3G52340","SPP2",587.06,-1.155,0.15185,-7.6063,{"v":2.82e-14,"d":"2.82E-14"},{"v":9.65e-13,"d":"9.65E-13"},"full_name=sucrose-6F-phosphate phosphohydrolase 2. sucrose-6F-phosphate phosphohydrolase 2. sucrose-phosphatase (SPP2)","AT4G27657",null,66.223,3.0135,0.46028,6.5471,{"v":5.87e-11,"d":"5.87E-11"},{"v":1.97E-9,"d":"1.97E-09"},"hypothetical protein."]
["AT5G43440",null,83.933,3.5281,0.42718,8.2591,1.47E-16,{"v":5.03e-15,"d":"5.03E-15"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. encodes a protein whose sequence is similar to ACC oxidase","AT5G53450","ORG1",1471,-0.96429,0.12678,-7.6058,2.83E-14,{"v":9.66e-13,"d":"9.66E-13"},"full_name=OBP3-responsive gene 1. OBP3-responsive protein 1.","AT3G23000","CIPK7",545.11,1.4007,0.21408,6.5428,{"v":6.04e-11,"d":"6.04E-11"},{"v":2.02e-09,"d":"2.02E-09"},"full_name=CBL-interacting protein kinase 7. CBL-interacting protein kinase 7. Encodes a serine/threonine protein kinase with similarities to CBL-interacting protein kinases, SNF1 and SOS2."]
["AT5G55220","TIG1",1490.8,1.181,0.14313,8.2516,1.56E-16,{"v":5.35e-15,"d":"5.35E-15"},"trigger factor type chaperone family protein.","AT1G79990",null,1246.6,0.91586,0.1205,7.6003,{"v":2.95e-14,"d":"2.95E-14"},{"v":1.01e-12,"d":"1.01E-12"},"coatomer subunit beta-2.","AT3G14720","MPK19",769.05,1.0908,0.16676,6.5414,{"v":6.09e-11,"d":"6.09E-11"},{"v":2.04E-9,"d":"2.04E-09"},"full_name=MAP kinase 19. MAP kinase 19. member of MAP Kinase"]
["AT5G16730",null,1368.1,-0.92485,0.11211,-8.2496,1.59E-16,{"v":5.43e-15,"d":"5.43E-15"},"weak chloroplast movement under blue light protein (DUF827). Encodes a microtubule-associated protein.","AT3G24170","GR1",1122.7,-0.93917,0.12365,-7.5954,{"v":3.07e-14,"d":"3.07E-14"},1.04E-12,"full_name=glutathione-disulfide reductase. glutathione-disulfide reductase. Encodes a cytosolic glutathione reductase.","AT5G11520","ASP3",1908.2,-0.84809,0.12975,-6.5361,{"v":6.31e-11,"d":"6.31E-11"},{"v":2.1e-09,"d":"2.10E-09"},"full_name=aspartate aminotransferase 3. aspartate aminotransferase 3. Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves."]
["AT1G25270","UMAMIT24",118.08,-2.7915,0.33886,-8.2379,{"v":1.75e-16,"d":"1.75E-16"},{"v":5.97e-15,"d":"5.97E-15"},"full_name=Usually multiple acids move in and out Transporters 24. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT1G80340","GA3OX2",194.7,2.2415,0.29514,7.5948,{"v":3.08e-14,"d":"3.08E-14"},1.05E-12,"full_name=gibberellin 3-oxidase 2. gibberellin 3-oxidase 2. Encodes a protein with gibberellin 3 &#946;-hydroxylase activity. The protein was heterologously expressed in E. coli and shown to catalyze the hydroxylation of both GA9 and GA20.","AT1G09200","H3.1",247.2,-1.5292,0.23398,-6.5355,{"v":6.34e-11,"d":"6.34E-11"},{"v":2.11E-9,"d":"2.11E-09"},"Histone superfamily protein."]
["AT2G14210","AGL44",78.286,-3.8914,0.47256,-8.2349,{"v":1.8e-16,"d":"1.80E-16"},{"v":6.11e-15,"d":"6.11E-15"},"full_name=AGAMOUS-like 44. AGAMOUS-like 44. MADS box gene, transcription factor","AT3G23890","TOPII",110.42,2.3672,0.31184,7.5912,3.17E-14,{"v":1.07e-12,"d":"1.07E-12"},"full_name=topoisomerase II. topoisomerase II. Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues.","AT2G41630","TFIIB",885.55,1.109,0.16973,6.534,{"v":6.41e-11,"d":"6.41E-11"},{"v":2.13e-09,"d":"2.13E-09"},"full_name=transcription factor IIB. transcription factor IIB. Encodes a transcription factor, TFIIB1, that plays important roles in pollen tube growth, guidance, and reception as well as endosperm development and is partially functionally different from AtTFIIB2 and AtTFIIB3/AtpBRP2."]
["AT2G27690","CYP94C1",346.09,-1.5826,0.19226,-8.232,{"v":1.84e-16,"d":"1.84E-16"},{"v":6.25e-15,"d":"6.25E-15"},"full_name=cytochrome P450, family 94, subfamily C, polypeptide 1. cytochrome P450, family 94, subfamily C, polypeptide 1. Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.","AT1G73680","ALPHA DOX2",424.1,-1.3856,0.18269,-7.5845,{"v":3.34e-14,"d":"3.34E-14"},1.13E-12,"full_name=alpha dioxygenase. alpha dioxygenase. Encodes an alpha dioxygenase. Recombinant protein catalyzes the conversion of a wide range of fatty acids into 2(R)-hydroperoxy derivatives.","AT1G76490","HMG1",1516.6,0.92169,0.14122,6.5266,{"v":6.73e-11,"d":"6.73E-11"},{"v":2.23E-9,"d":"2.23E-09"},"full_name=hydroxy methylglutaryl CoA reductase 1. hydroxy methylglutaryl CoA reductase 1. Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine"]
["AT4G37760","SQE3",456.3,-1.2846,0.15605,-8.2318,{"v":1.84e-16,"d":"1.84E-16"},{"v":6.25e-15,"d":"6.25E-15"},"full_name=squalene epoxidase 3. squalene epoxidase 3.","AT2G17280",null,605.04,-1.1138,0.14686,-7.5844,{"v":3.34e-14,"d":"3.34E-14"},1.13E-12,"Phosphoglycerate mutase family protein.","AT1G75170",null,184.11,1.8432,0.28253,6.5239,{"v":6.85e-11,"d":"6.85E-11"},{"v":2.27e-09,"d":"2.27E-09"},"Sec14p-like phosphatidylinositol transfer family protein."]
["AT3G27030",null,503.02,-1.3602,0.16544,-8.2217,{"v":2.01e-16,"d":"2.01E-16"},{"v":6.79e-15,"d":"6.79E-15"},"transmembrane protein.","AT1G36370","SHM7",689.7,-1.0921,0.14401,-7.5831,{"v":3.37e-14,"d":"3.37E-14"},1.14E-12,"full_name=serine hydroxymethyltransferase 7. serine hydroxymethyltransferase 7. Encodes a putative serine hydroxymethyltransferase.","AT2G14247",null,83.203,-2.9081,0.446,-6.5204,{"v":7.01e-11,"d":"7.01E-11"},{"v":2.32e-09,"d":"2.32E-09"},"Expressed protein."]
["AT1G76160","sks5",1344.2,-0.98558,0.11989,-8.2204,2.03E-16,{"v":6.85e-15,"d":"6.85E-15"},"full_name=SKU5 similar 5. SKU5 similar 5.","AT4G33820",null,76.149,-4.1898,0.55303,-7.576,{"v":3.56e-14,"d":"3.56E-14"},{"v":1.2e-12,"d":"1.20E-12"},"Glycosyl hydrolase superfamily protein.","AT3G24520","HSFC1",217.83,1.9811,0.30398,6.5171,{"v":7.17e-11,"d":"7.17E-11"},{"v":2.36e-09,"d":"2.36E-09"},"full_name=heat shock transcription factor C1. heat shock transcription factor C1. member of Heat Stress Transcription Factor (Hsf) family"]
["AT1G51140","FBH3",1016.2,0.99934,0.12177,8.2068,{"v":2.27e-16,"d":"2.27E-16"},{"v":7.66e-15,"d":"7.66E-15"},"full_name=FLOWERING BHLH 3. basic helix-loop-helix (bHLH) DNA-binding superfamily protein. Encodes a basic helix?loop?helix-type transcription factor involved in photoperiodism flowering.","AT4G36195",null,1118.3,-0.9542,0.12613,-7.5652,{"v":3.87e-14,"d":"3.87E-14"},{"v":1.3e-12,"d":"1.30E-12"},"Serine carboxypeptidase S28 family protein.","AT5G61000","RPA70D",129.58,-1.9557,0.30014,-6.516,{"v":7.22e-11,"d":"7.22E-11"},{"v":2.38e-09,"d":"2.38E-09"},"Replication factor-A protein 1-like protein."]
["AT3G15530",null,578.96,1.1792,0.14375,8.2033,{"v":2.34e-16,"d":"2.34E-16"},{"v":7.87e-15,"d":"7.87E-15"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT5G57030","LUT2",282.31,1.5518,0.20512,7.5651,{"v":3.88e-14,"d":"3.88E-14"},{"v":1.3e-12,"d":"1.30E-12"},"full_name=LUTEIN DEFICIENT 2. Lycopene beta/epsilon cyclase protein. Lutein-deficient 2 (LUT2) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Encodes lycopene epsilon cyclase","AT3G54580","EXT17",426.39,1.7199,0.26403,6.5139,{"v":7.32e-11,"d":"7.32E-11"},{"v":2.41e-09,"d":"2.41E-09"},"Proline-rich extensin-like family protein."]
["AT4G35090","CAT2",13020,0.77203,0.09412,8.2027,{"v":2.35e-16,"d":"2.35E-16"},{"v":7.9e-15,"d":"7.90E-15"},"full_name=catalase 2. catalase 2. Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2).","AT3G59780",null,806.62,1.0648,0.1409,7.5573,{"v":4.11e-14,"d":"4.11E-14"},1.38E-12,"Rhodanese/Cell cycle control phosphatase superfamily protein.","AT5G45130","RHA1",594.27,1.1427,0.17543,6.5136,7.34E-11,{"v":2.41e-09,"d":"2.41E-09"},"full_name=RAB homolog 1. Ras small GTP-binding family protein. small GTP binding protein"]
["AT4G28811",null,178.46,-2.1444,0.26147,-8.2013,{"v":2.38e-16,"d":"2.38E-16"},{"v":7.98e-15,"d":"7.98E-15"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT5G59590","UGT76E2",425.75,-1.4167,0.18754,-7.5542,{"v":4.21e-14,"d":"4.21E-14"},{"v":1.41e-12,"d":"1.41E-12"},"full_name=UDP-glucosyl transferase 76E2. UDP-glucosyl transferase 76E2.","AT5G66080","APD9",207.12,1.6557,0.25436,6.5093,{"v":7.55e-11,"d":"7.55E-11"},{"v":2.47e-09,"d":"2.47E-09"},"Protein phosphatase 2C family protein."]
["AT1G14520","MIOX1",5224.3,-0.71909,0.087682,-8.201,{"v":2.38e-16,"d":"2.38E-16"},{"v":7.98e-15,"d":"7.98E-15"},"full_name=myo-inositol oxygenase 1. myo-inositol oxygenase 1. Encodes MIOX1. Belongs to myo-inositol oxygenase gene family.","AT5G13420","TRA2",1150.7,-0.97792,0.12947,-7.5534,{"v":4.24e-14,"d":"4.24E-14"},{"v":1.41e-12,"d":"1.41E-12"},"full_name=transaldolase 2. Aldolase-type TIM barrel family protein.","AT2G37660",null,1515.3,-0.86684,0.13317,-6.5092,{"v":7.55e-11,"d":"7.55E-11"},{"v":2.47e-09,"d":"2.47E-09"},"NAD(P)-binding Rossmann-fold superfamily protein."]
["AT1G56650","PAP1",77.069,4.2423,0.51733,8.2004,{"v":2.4E-16,"d":"2.40E-16"},{"v":8.01e-15,"d":"8.01E-15"},"full_name=production of anthocyanin pigment 1. production of anthocyanin pigment 1. Encodes a putative MYB domain containing transcription factor involved in anthocyanin metabolism and radical scavenging. Essential for the sucrose-mediated expression of the dihydroflavonol reductase gene. Auxin and ethylene responsiveness of PAP1 transcription is lost in myb12 mutants.","AT1G02205","CER1",50.503,5.7599,0.76308,7.5482,{"v":4.41e-14,"d":"4.41E-14"},1.47E-12,"full_name=ECERIFERUM 1. Fatty acid hydroxylase superfamily. Expression of the CER1 gene associated with production of stem epicuticular wax and pollen fertility. Biochemical studies showed that cer1 mutants are blocked in the conversion of stem wax C30 aldehydes to C29 alkanes, and they also lack the secondary alcohols and ketones. These suggested the CER1 protein is an aldehyde decarbonylase, but the exact molecular function of this protein remains to be determined.","AT3G01650","RGLG1",267.62,1.4349,0.22056,6.5057,{"v":7.73e-11,"d":"7.73E-11"},{"v":2.52E-9,"d":"2.52E-09"},"full_name=RING domain ligase1. RING domain ligase1. Encodes RGLG1 (RING domain ligase 1), a RING domain ubiquitin E3 ligase that negatively regulates the drought stress response by mediating ERF53 transcriptional activity."]
["AT5G58070","TIL",6706.5,-0.85651,0.10445,-8.2001,{"v":2.4E-16,"d":"2.40E-16"},{"v":8.02e-15,"d":"8.02E-15"},"full_name=temperature-induced lipocalin. temperature-induced lipocalin. Encodes a temperature-induced lipocalin TIL1. Involved in thermotolerance. Peripherally associated with plasma membrane.","AT2G01850","EXGT-A3",293.41,-1.9427,0.25762,-7.5409,{"v":4.67e-14,"d":"4.67E-14"},{"v":1.55e-12,"d":"1.55E-12"},"full_name=endoxyloglucan transferase A3. endoxyloglucan transferase A3. EXGT-A3 has homology to xyloglucan endotransglucosylases/hydrolases (XTHs). Mutants in this gene show a lesion mimic phenotype associated with leaf maturation and a reduction in the number of tertiary veins. Individual tracheary elements in the mutants are shorter, but phloem transport activity is not severely affected. EXGT-A3 plays a role in xyloglucan degradation in the differentiating tracheary elements of rosette leaves.","AT1G04300","MUSE13",592.12,1.3999,0.21532,6.5014,{"v":7.96e-11,"d":"7.96E-11"},{"v":2.59e-09,"d":"2.59E-09"},"TRAF-like superfamily protein."]
["AT5G26600",null,850.84,-1.0483,0.12797,-8.1915,2.58E-16,{"v":8.59e-15,"d":"8.59E-15"},"Pyridoxal phosphate (PLP)-dependent transferases superfamily protein.","AT1G25530",null,335.58,-1.7351,0.23038,-7.5315,{"v":5.01e-14,"d":"5.01E-14"},1.66E-12,"Transmembrane amino acid transporter family protein.","AT1G42550","PMI1",677.73,1.3689,0.21065,6.4986,{"v":8.11e-11,"d":"8.11E-11"},{"v":2.63e-09,"d":"2.63E-09"},"full_name=PLASTID MOVEMENT IMPAIRED1. plastid movement impaired1. Encodes a plant-specific protein of unknown function that appears to be conserved among angiosperms."]
["AT5G05890","UGT76C5",128.29,2.6591,0.32464,8.1908,{"v":2.59e-16,"d":"2.59E-16"},{"v":8.62e-15,"d":"8.62E-15"},"UDP-Glycosyltransferase superfamily protein.","AT4G14780",null,88.283,-3.8159,0.50698,-7.5267,{"v":5.2e-14,"d":"5.20E-14"},{"v":1.72e-12,"d":"1.72E-12"},"Protein kinase superfamily protein.","AT1G69040","ACR4",620.56,-1.1298,0.17393,-6.4958,{"v":8.26e-11,"d":"8.26E-11"},{"v":2.68e-09,"d":"2.68E-09"},"full_name=ACT domain repeat 4. ACT domain repeat 4. ACT-domain containing protein involved in feedback regulation of amino acid metabolism"]
["AT2G45560","CYP76C1",1591.3,-0.91481,0.11177,-8.1845,{"v":2.74e-16,"d":"2.74E-16"},{"v":9.08e-15,"d":"9.08E-15"},"full_name=cytochrome P450, family 76, subfamily C, polypeptide 1. cytochrome P450, family 76, subfamily C, polypeptide 1. cytochrome P450 monooxygenase","AT2G04780","FLA7",238.92,1.5574,0.20708,7.5205,{"v":5.46e-14,"d":"5.46E-14"},{"v":1.8E-12,"d":"1.80E-12"},"full_name=FASCICLIN-like arabinoogalactan 7. FASCICLIN-like arabinoogalactan 7. fasciclin-like arabinogalactan-protein 7 (Fla7)","AT2G30800","HVT1",554.02,1.1068,0.17055,6.4893,{"v":8.62e-11,"d":"8.62E-11"},{"v":2.79e-09,"d":"2.79E-09"},"full_name=helicase in vascular tissue and tapetum. helicase in vascular tissue and tapetum. Has RNA or DNA helicase activity and expressed specifically in tapetum and vascular tissue. First identified member of a new group of the mle helicase group of the DEAH family."]
["AT5G20940",null,255.93,-1.8491,0.22597,-8.1831,{"v":2.77e-16,"d":"2.77E-16"},{"v":9.16e-15,"d":"9.16E-15"},"Glycosyl hydrolase family protein.","AT3G18050",null,150,2.1314,0.28346,7.5191,{"v":5.52e-14,"d":"5.52E-14"},{"v":1.82e-12,"d":"1.82E-12"},"GPI-anchored protein.","AT4G31860",null,286.67,1.4829,0.22871,6.4839,{"v":8.94e-11,"d":"8.94E-11"},{"v":2.89e-09,"d":"2.89E-09"},"Protein phosphatase 2C family protein."]
["AT3G21560","UGT84A2",4654.4,-0.97614,0.11937,-8.1777,{"v":2.89e-16,"d":"2.89E-16"},{"v":9.56e-15,"d":"9.56E-15"},"full_name=UDP-glucosyl transferase 84A2. UDP-Glycosyltransferase superfamily protein. Encodes a protein with sinapic acid:UDP-glucose glucosyltransferase activity. Mutants defective in this gene are hyper-fluorescent (which accumulate in their trichomes a compound that is likely to be 3',5'-dimethoxynaringenin chalcone or sinapoyltriacetic acid lactone, potential products of the concerted action of 4-coumarate CoA ligase and chalcone synthase on sinapic acid). Also shown to be required for Arabidopsis nonhost resistance to the Asian soybean rust pathogen Phakopsora pachyrhizi.","AT3G26380","APSE",905.56,-0.9769,0.1302,-7.5033,{"v":6.22e-14,"d":"6.22E-14"},{"v":2.05e-12,"d":"2.05E-12"},"Melibiase family protein.","AT1G07590",null,3043.6,0.87884,0.13579,6.4723,{"v":9.66e-11,"d":"9.66E-11"},{"v":3.12E-9,"d":"3.12E-09"},"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT1G47540",null,6333.3,-1.2046,0.14741,-8.1719,{"v":3.03e-16,"d":"3.03E-16"},{"v":1E-14,"d":"1.00E-14"},"Scorpion toxin-like knottin superfamily protein.","AT5G17230","PSY",340.8,1.3453,0.17931,7.5029,{"v":6.24e-14,"d":"6.24E-14"},{"v":2.05e-12,"d":"2.05E-12"},"full_name=PHYTOENE SYNTHASE. PHYTOENE SYNTHASE. Encodes phytoene synthase.","AT2G46260","LRB1",670.73,1.1828,0.18281,6.4702,{"v":9.79e-11,"d":"9.79E-11"},{"v":3.15e-09,"d":"3.15E-09"},"full_name=light-response BTB 1. BTB/POZ/Kelch-associated protein. Involvement in protein ubiquitylation is predicted based on physical interaction with CULLIN 3 proteins."]
["AT1G74210","GDPD5",723.91,-1.0794,0.13213,-8.1693,{"v":3.1e-16,"d":"3.10E-16"},1.02E-14,"full_name=glycerophosphodiester phosphodiesterase 5. PLC-like phosphodiesterases superfamily protein. Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family.","AT1G48920","NUC-L1",14711,-0.85543,0.11406,-7.4996,{"v":6.4e-14,"d":"6.40E-14"},{"v":2.1e-12,"d":"2.10E-12"},"full_name=nucleolin like 1. nucleolin like 1. Encodes ATNUC-L1 (NUCLEOLIN LIKE 1), the predominant form of the two nucleolin proteins found in Arabidopsis. This protein is involved in rRNA processing, ribosome biosynthesis, and vascular pattern formation. PARL1 localizes to the nucleolus and parl1 mutants accumulate elevated levels of the unspliced 35S pre-rRNA. parl1 mutants also have defects in cotyledon, leaf, sepal, and petal vein patterning and have reduced stature, reduced fertility, increased bushiness, and reduced root length. The sugar-induced expression of ribosome proteins is also reduced in parl1 mutants.","AT5G62340",null,118.71,-2.0194,0.31236,-6.4649,1.01E-10,{"v":3.26e-09,"d":"3.26E-09"},"Plant invertase/pectin methylesterase inhibitor superfamily protein."]
["AT1G12550","HPR3",224.9,-2.0804,0.25494,-8.1602,3.34E-16,{"v":1.1E-14,"d":"1.10E-14"},"full_name=hydroxypyruvate reductase 3. D-isomer specific 2-hydroxyacid dehydrogenase family protein. Encodes a hydroxypyruvate reductase that reduces HP to glycerate and shows even more activity with glyoxylate, a more upstream intermediate of the photorespiratory cycle. It is likely targeted to the chloroplast where it could provide a compensatory bypass for the reduction of HP and glyoxylate within this compartment.","AT1G64950","CYP89A5",578.26,-1.5222,0.20346,-7.4815,{"v":7.35e-14,"d":"7.35E-14"},2.41E-12,"full_name=cytochrome P450, family 89, subfamily A, polypeptide 5. cytochrome P450, family 89, subfamily A, polypeptide 5. member of CYP89A","AT4G10040","CYTC-2",170.08,1.7174,0.26578,6.4618,{"v":1.03e-10,"d":"1.03E-10"},{"v":3.32e-09,"d":"3.32E-09"},"full_name=cytochrome c-2. cytochrome c-2. Encodes cytochrome c. Promoter directs preferential expression in vascular tissues of cotyledons, leaves, roots, and hypocotyls, and in anthers."]
["AT5G24910","CYP714A1",290.74,-1.6898,0.20749,-8.1439,{"v":3.83e-16,"d":"3.83E-16"},1.26E-14,"full_name=cytochrome P450, family 714, subfamily A, polypeptide 1. cytochrome P450, family 714, subfamily A, polypeptide 1. Member of CYP714A. Encodes one of the two tandemly duplicated gene pair ELA1 (CYP714A1) and ELA2 (CYP714A2), homologs of the rice cytochrome P450 monooxygenase gene EUI1. Double mutation of ELA1 and ELA2 results in increased biomass and enlarged organs.","AT3G62980","TIR1",891.3,1.0307,0.13778,7.4809,{"v":7.38e-14,"d":"7.38E-14"},2.41E-12,"full_name=TRANSPORT INHIBITOR RESPONSE 1. F-box/RNI-like superfamily protein. Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation. Mutations in TIR1 block auxin stimulation of flavonoid synthesis.","AT3G07255",null,76.504,3.6838,0.57023,6.4602,1.05E-10,{"v":3.35e-09,"d":"3.35E-09"},"nuclear transport factor 2/RNA recognition motif protein."]
["AT3G07320",null,341.15,1.7168,0.21083,8.1429,{"v":3.86e-16,"d":"3.86E-16"},1.27E-14,"O-Glycosyl hydrolases family 17 protein.","AT1G31950",null,184.99,1.818,0.24302,7.4807,{"v":7.39e-14,"d":"7.39E-14"},2.41E-12,"Terpenoid cyclases/Protein prenyltransferases superfamily protein.","AT1G27150",null,391.75,1.2042,0.18663,6.4522,{"v":1.1e-10,"d":"1.10E-10"},{"v":3.53E-9,"d":"3.53E-09"},"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT5G38430","RBCS1B",648.04,1.2103,0.1487,8.1393,{"v":3.98e-16,"d":"3.98E-16"},{"v":1.3E-14,"d":"1.30E-14"},"full_name=Rubisco small subunit 1B. Ribulose bisphosphate carboxylase (small chain) family protein. Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410).","AT3G61270",null,57.213,4.2536,0.56881,7.4781,{"v":7.54e-14,"d":"7.54E-14"},2.46E-12,"O-glucosyltransferase rumi-like protein (DUF821).","AT4G34860","A/N-InvB",861.8,0.96289,0.14933,6.4482,1.13E-10,{"v":3.62e-09,"d":"3.62E-09"},"full_name=alkaline/neutral invertase B. Plant neutral invertase family protein."]
["AT4G31590","CSLC5",894.46,-1.5264,0.18756,-8.1384,{"v":4.01e-16,"d":"4.01E-16"},{"v":1.31e-14,"d":"1.31E-14"},"full_name=Cellulose-synthase-like C5. Cellulose-synthase-like C5. encodes a gene similar to cellulose synthase","AT3G16150","ASPGB1",122.45,2.1704,0.29071,7.4658,{"v":8.28e-14,"d":"8.28E-14"},2.69E-12,"full_name=asparaginase B1. N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein. Encodes an asparaginase that catalyzes the degradation of L-asparagine to L-aspartic acid and ammonia.","AT1G07728",null,273.19,1.3768,0.21362,6.445,1.16E-10,{"v":3.69e-09,"d":"3.69E-09"},"Natural antisense transcript overlaps with AT1G07725. Potential natural antisense gene, locus overlaps with AT1G07725 Natural antisense transcript overlaps with AT1G07725"]
["AT5G14260","SAFE1",991.6,0.99497,0.12227,8.1378,{"v":4.03e-16,"d":"4.03E-16"},{"v":1.31e-14,"d":"1.31E-14"},"Rubisco methyltransferase family protein.","AT1G03990",null,142.55,-2.9355,0.39339,-7.4621,{"v":8.51e-14,"d":"8.51E-14"},{"v":2.77e-12,"d":"2.77E-12"},"Long-chain fatty alcohol dehydrogenase family protein.","AT4G37560","IAMH2",251.55,1.4997,0.23274,6.4438,1.16E-10,{"v":3.71e-09,"d":"3.71E-09"},"Acetamidase/Formamidase family protein."]
["AT2G23640","RTNLB13",181.3,-2.146,0.26378,-8.1356,{"v":4.1e-16,"d":"4.10E-16"},1.34E-14,"full_name=Reticulan like protein B13. Reticulan like protein B13. Encodes RTNLB13, a reticulon protein integral to the endoplasmic reticulum (ER) membrane that have the ability to shape the ER into tubules.","AT1G52100",null,251.18,1.8506,0.2481,7.4592,{"v":8.7e-14,"d":"8.70E-14"},{"v":2.82e-12,"d":"2.82E-12"},"Mannose-binding lectin superfamily protein.","AT5G46580","SOT1",634.88,-1.0342,0.16079,-6.4321,1.26E-10,{"v":4e-09,"d":"4.00E-09"},"pentatricopeptide (PPR) repeat-containing protein."]
["AT5G63810","BGAL10",950.29,1.1397,0.14014,8.1326,{"v":4.2e-16,"d":"4.20E-16"},{"v":1.37e-14,"d":"1.37E-14"},"full_name=beta-galactosidase 10. beta-galactosidase 10. member of Glycoside Hydrolase Family 35","AT1G59870","PEN3",344.58,1.4632,0.19633,7.4528,{"v":9.14e-14,"d":"9.14E-14"},{"v":2.96e-12,"d":"2.96E-12"},"full_name=PENETRATION 3. ABC-2 and Plant PDR ABC-type transporter family protein. ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acid%E2%80%93dependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance.","AT3G53400",null,303.88,1.5942,0.24785,6.432,1.26E-10,{"v":4e-09,"d":"4.00E-09"},"peptide upstream protein."]
["AT5G08360",null,225.99,-2.0727,0.2549,-8.1314,{"v":4.24e-16,"d":"4.24E-16"},1.38E-14,"Stu1, putative (DUF789).","AT3G52930","FBA8",2949.2,0.77249,0.10374,7.4467,{"v":9.57e-14,"d":"9.57E-14"},3.09E-12,"full_name=fructose-bisphosphate aldolase 8. Aldolase superfamily protein.","AT5G03850",null,994.92,-1.0201,0.15862,-6.4316,1.26E-10,{"v":4e-09,"d":"4.00E-09"},"Nucleic acid-binding, OB-fold-like protein."]
["AT5G60360","ALP",2435.7,1.11,0.13654,8.1295,4.31E-16,{"v":1.4E-14,"d":"1.40E-14"},"full_name=aleurain-like protease. aleurain-like protease. Encodes a senescence-associated thiol protease.","AT1G70800","EHB1",73.726,-3.6941,0.49624,-7.4442,{"v":9.76e-14,"d":"9.76E-14"},{"v":3.15e-12,"d":"3.15E-12"},"full_name=ENHANCED BENDING 1. Calcium-dependent lipid-binding (CaLB domain) family protein. Encodes a novel NPH3/phototropin binding factor with a calcium binding domain that negatively affects hypocotyl bending under blue light conditions in Arabidopsis thaliana and may regulate phototropism.","AT4G15620","CASPL1E2",102.12,2.2511,0.35017,6.4287,{"v":1.29e-10,"d":"1.29E-10"},{"v":4.07e-09,"d":"4.07E-09"},"Uncharacterized protein family (UPF0497)."]
["AT4G08850","MIK2",129.67,2.5603,0.31496,8.129,{"v":4.33e-16,"d":"4.33E-16"},{"v":1.4E-14,"d":"1.40E-14"},"Leucine-rich repeat receptor-like protein kinase family protein.","AT4G27860","MEB1",1031.2,0.91308,0.12288,7.4304,{"v":1.08e-13,"d":"1.08E-13"},{"v":3.49e-12,"d":"3.49E-12"},"full_name=MEMBRANE OF ER BODY 1. vacuolar iron transporter (VIT) family protein.","AT2G05520","GRP-3",941.68,1.2367,0.19239,6.4284,{"v":1.29e-10,"d":"1.29E-10"},{"v":4.07e-09,"d":"4.07E-09"},"full_name=glycine-rich protein 3. glycine-rich protein 3. Encodes a glycine-rich protein that is expressed mainly in stems and leaves. mRNA levels are upregulated in response to ABA, salicylic acid and ethylene but downregulated in response to dessication."]
["AT5G14920","GASA14",319.6,2.0075,0.2471,8.1243,{"v":4.5e-16,"d":"4.50E-16"},{"v":1.45e-14,"d":"1.45E-14"},"Gibberellin-regulated family protein. Encodes a GASA domain containing protein that regulates increases in plant growth through GA-induced and DELLA-dependent signal transduction and that can increase abiotic stress resistance by reducing ROS accumulation.","AT4G38950",null,82.25,2.7725,0.3732,7.429,1.09E-13,{"v":3.52e-12,"d":"3.52E-12"},"ATP binding microtubule motor family protein.","AT5G55700","BAM4",337.7,1.3344,0.20774,6.4235,{"v":1.33e-10,"d":"1.33E-10"},{"v":4.2e-09,"d":"4.20E-09"},"full_name=beta-amylase 4. beta-amylase 4. In vitro assay indicates no beta-amylase activity of BAM4. However mutation in BAM4 impairs starch breakdown. BAM4 may play a regulatory role."]
["AT1G47395","FEP2",1697,-1.0807,0.13303,-8.1237,{"v":4.52e-16,"d":"4.52E-16"},{"v":1.46e-14,"d":"1.46E-14"},"hypothetical protein.","AT3G48460","SFAR4",92.38,2.5308,0.34088,7.4244,1.13E-13,{"v":3.64e-12,"d":"3.64E-12"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT2G46790","PRR9",114.12,2.219,0.34574,6.4182,{"v":1.38e-10,"d":"1.38E-10"},{"v":4.34e-09,"d":"4.34E-09"},"full_name=pseudo-response regulator 9. pseudo-response regulator 9. Pseudo-response regulator PRR9. Involved in clock function. PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR9. Interact with TOC1 in a yeast two-hybrid assay. Acts as transcriptional repressor of CCA1 and LHY."]
["AT3G62030","ROC4",2182.8,0.76599,0.094389,8.1152,{"v":4.85e-16,"d":"4.85E-16"},{"v":1.56e-14,"d":"1.56E-14"},"full_name=rotamase CYP 4. rotamase CYP 4. nuclear-encoded chloroplast stromal cyclophilin CYP20-3 (also known as ROC4). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT1G35580","CINV1",316.67,1.384,0.18665,7.415,{"v":1.22e-13,"d":"1.22E-13"},{"v":3.9e-12,"d":"3.90E-12"},"full_name=cytosolic invertase 1. cytosolic invertase 1. CINV1 / A/N-InvG is an alkaline/neutral invertase that breaks sucrose down into fructose and glucose (GH100). The exact localization of CINV1 remains under investigation but there is evidence that fluorescently-tagged CINV1 localizes to the cytoplasm. atinvg mutants have reduced root growth, reduced invertase activity, and increased expression of antioxidant genes under basal conditions. The levels of CINV1 / A/N-InvG transcripts rise in response to a hydrogen peroxide treatment. The protein has been shown to interact with PIP5K9.","AT2G30600",null,487.63,1.2598,0.19647,6.4125,1.43E-10,{"v":4.49E-9,"d":"4.49E-09"},"BTB/POZ domain-containing protein."]
["AT4G05180","PSBQ-2",961.33,-1.6759,0.20652,-8.115,{"v":4.86e-16,"d":"4.86E-16"},{"v":1.56e-14,"d":"1.56E-14"},"full_name=photosystem II subunit Q-2. photosystem II subunit Q-2. Encodes the PsbQ subunit of the oxygen evolving complex of photosystem II.","AT2G42690",null,46.748,4.3425,0.586,7.4104,{"v":1.26e-13,"d":"1.26E-13"},{"v":4.03e-12,"d":"4.03E-12"},"alpha/beta-Hydrolases superfamily protein.","AT5G46410","SSP4",328.17,1.3015,0.20297,6.4123,1.43E-10,{"v":4.49E-9,"d":"4.49E-09"},"full_name=SCP1-like small phosphatase 4. SCP1-like small phosphatase 4. Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4)."]
["AT4G19230","CYP707A1",502.99,-1.3804,0.17032,-8.1046,{"v":5.29e-16,"d":"5.29E-16"},{"v":1.7E-14,"d":"1.70E-14"},"full_name=cytochrome P450, family 707, subfamily A, polypeptide 1. cytochrome P450, family 707, subfamily A, polypeptide 1. Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.","AT4G34710","ADC2",10363,-0.74501,0.10056,-7.4083,{"v":1.28e-13,"d":"1.28E-13"},{"v":4.09e-12,"d":"4.09E-12"},"full_name=arginine decarboxylase 2. arginine decarboxylase 2. encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. ADC2 is stress-inducible (osmotic stress). Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Overexpression causes phenotypes similar to GA-deficient plants and these plants show reduced levels of GA due to lower expression levels of AtGA20ox1, AtGA3ox3 and AtGA3ox1.","AT4G16490",null,472.53,1.1485,0.17925,6.4077,{"v":1.48e-10,"d":"1.48E-10"},{"v":4.62e-09,"d":"4.62E-09"},"ARM repeat superfamily protein."]
["AT5G42250",null,194.63,2.1719,0.26808,8.1016,{"v":5.42e-16,"d":"5.42E-16"},1.74E-14,"Zinc-binding alcohol dehydrogenase family protein.","AT3G23470",null,212.05,1.7777,0.24082,7.3818,{"v":1.56e-13,"d":"1.56E-13"},{"v":4.98e-12,"d":"4.98E-12"},"Cyclopropane-fatty-acyl-phospholipid synthase.","AT5G61530",null,391.35,1.2644,0.19758,6.3993,1.56E-10,{"v":4.88e-09,"d":"4.88E-09"},"small G protein family protein / RhoGAP family protein."]
["AT5G02550",null,179.92,2.1823,0.26958,8.0952,{"v":5.72e-16,"d":"5.72E-16"},{"v":1.83e-14,"d":"1.83E-14"},"hypothetical protein.","AT5G16030",null,49.484,5.2283,0.70832,7.3812,{"v":1.57e-13,"d":"1.57E-13"},{"v":4.99e-12,"d":"4.99E-12"},"mental retardation GTPase activating protein.","AT1G64820",null,52.103,3.3213,0.51915,6.3975,1.58E-10,{"v":4.93e-09,"d":"4.93E-09"},"MATE efflux family protein."]
["AT3G61680","PLIP1",747.22,-1.6153,0.19972,-8.0875,{"v":6.09e-16,"d":"6.09E-16"},{"v":1.94e-14,"d":"1.94E-14"},"alpha/beta-Hydrolases superfamily protein.","AT1G21500",null,112.83,2.5466,0.34519,7.3774,1.61E-13,{"v":5.13e-12,"d":"5.13E-12"},"hypothetical protein.","AT3G17510","CIPK1",273.08,1.4196,0.22194,6.3962,{"v":1.59e-10,"d":"1.59E-10"},{"v":4.96e-09,"d":"4.96E-09"},"full_name=CBL-interacting protein kinase 1. CBL-interacting protein kinase 1. Encodes a CBL-interacting protein kinase. Specifically interacts with ECT1 and ECT2."]
["AT4G13170",null,1025.3,1.0184,0.12613,8.0743,{"v":6.78e-16,"d":"6.78E-16"},{"v":2.16e-14,"d":"2.16E-14"},"Ribosomal protein L13 family protein.","AT3G05500","LDAP3",939.41,-0.99005,0.13423,-7.376,{"v":1.63e-13,"d":"1.63E-13"},5.17E-12,"Rubber elongation factor protein (REF). Encodes a protein that associates with lipid droplet surfaces.","AT4G33220","PME44",147.2,-1.9857,0.31059,-6.3933,{"v":1.62e-10,"d":"1.62E-10"},{"v":5.05e-09,"d":"5.05E-09"},"full_name=pectin methylesterase 44. pectin methylesterase 44."]
["AT3G15356",null,93.436,3.7596,0.46582,8.0709,6.98E-16,{"v":2.22e-14,"d":"2.22E-14"},"Legume lectin family protein.","AT5G28300","GT2L",1498.7,-0.96449,0.13078,-7.3747,1.65E-13,5.22E-12,"Duplicated homeodomain-like superfamily protein. Encodes a Ca(2+)-dependent CaM-binding protein. AtGT2L specifically targets the nucleus and possesses both transcriptional activation and DNA-binding abilities, implicating its function as a nuclear transcription factor.","AT1G32400","TOM2A",196.98,1.6441,0.25748,6.3853,1.71E-10,{"v":5.31e-09,"d":"5.31E-09"},"full_name=tobamovirus multiplication 2A. tobamovirus multiplication 2A. TOM2A encodes a 280 amino acid putative four-pass transmembrane protein with a C-terminal farnesylation signal, essential for efficient multiplication of tobacco mosaic viruses."]
["AT1G03890",null,5679.5,-3.9358,0.48807,-8.0641,{"v":7.38e-16,"d":"7.38E-16"},2.34E-14,"RmlC-like cupins superfamily protein.","AT4G26540","RGFR3",307.83,1.4724,0.19989,7.3657,{"v":1.76e-13,"d":"1.76E-13"},{"v":5.57e-12,"d":"5.57E-12"},"Leucine-rich repeat receptor-like protein kinase family protein.","AT3G07230",null,452.82,-1.1782,0.18463,-6.3817,{"v":1.75e-10,"d":"1.75E-10"},{"v":5.43e-09,"d":"5.43E-09"},"wound-responsive protein-like protein."]
["AT1G01490","ATHMP01",718.68,-1.1343,0.14069,-8.0626,{"v":7.47e-16,"d":"7.47E-16"},{"v":2.37e-14,"d":"2.37E-14"},"Heavy metal transport/detoxification superfamily protein.","AT1G73210",null,176.45,-2.0684,0.28115,-7.3569,{"v":1.88e-13,"d":"1.88E-13"},{"v":5.94e-12,"d":"5.94E-12"},"hypothetical protein (DUF789).","AT1G67750",null,1103.1,-0.91249,0.14301,-6.3804,{"v":1.77e-10,"d":"1.77E-10"},{"v":5.46e-09,"d":"5.46E-09"},"Pectate lyase family protein."]
["AT3G17170","RFC3",1275.1,1.0412,0.12914,8.0622,{"v":7.5e-16,"d":"7.50E-16"},{"v":2.37e-14,"d":"2.37E-14"},"full_name=REGULATOR OF FATTY-ACID COMPOSITION 3. Translation elongation factor EF1B/ribosomal protein S6 family protein.","AT5G13710","SMT1",348.77,1.6025,0.21815,7.3461,{"v":2.04e-13,"d":"2.04E-13"},{"v":6.43e-12,"d":"6.43E-12"},"full_name=sterol methyltransferase 1. sterol methyltransferase 1. SMT1 controls the level of cholesterol in plants","AT4G23670",null,4467.5,1.0062,0.15778,6.3771,{"v":1.8E-10,"d":"1.80E-10"},{"v":5.57e-09,"d":"5.57E-09"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein."]
["AT5G09540",null,151.95,-2.354,0.29207,-8.0598,{"v":7.64e-16,"d":"7.64E-16"},2.41E-14,"Chaperone DnaJ-domain superfamily protein.","AT4G34135","UGT73B2",89.996,-3.0349,0.41341,-7.3412,{"v":2.12e-13,"d":"2.12E-13"},{"v":6.66e-12,"d":"6.66E-12"},"full_name=UDP-glucosyltransferase 73B2. UDP-glucosyltransferase 73B2. The At4g34135 gene encodes a flavonol 7-O-glucosyltransferase (EC 2.4.1.237) that glucosylates also with a 20 fold lower activity flavonols (kaempferol and quercetin) at the 3-O-position.","AT1G29980",null,404,-1.2538,0.19665,-6.3761,{"v":1.82e-10,"d":"1.82E-10"},{"v":5.6e-09,"d":"5.60E-09"},"choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642)."]
["AT5G09550","GDI",157.75,-2.6964,0.33485,-8.0525,{"v":8.11e-16,"d":"8.11E-16"},{"v":2.56e-14,"d":"2.56E-14"},"full_name=RAB GDP-dissociation inhibitor. GDP dissociation inhibitor family protein / Rab GTPase activator family protein.","AT3G23530",null,120.92,10.796,1.4706,7.341,{"v":2.12e-13,"d":"2.12E-13"},{"v":6.66e-12,"d":"6.66E-12"},"Cyclopropane-fatty-acyl-phospholipid synthase.","AT5G11420",null,660.95,-1.034,0.16224,-6.3732,{"v":1.85e-10,"d":"1.85E-10"},{"v":5.7e-09,"d":"5.70E-09"},"transmembrane protein, putative (Protein of unknown function, DUF642)."]
["AT1G09380","UMAMIT25",762.9,-1.6745,0.20801,-8.0504,8.25E-16,{"v":2.6E-14,"d":"2.60E-14"},"full_name=Usually multiple acids move in and out Transporters 25. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT3G13870","RHD3",871.21,0.95038,0.12954,7.3366,2.19E-13,{"v":6.87e-12,"d":"6.87E-12"},"full_name=ROOT HAIR DEFECTIVE 3. Root hair defective 3 GTP-binding protein (RHD3). required for regulated cell expansion and normal root hair development. Encodes an evolutionarily conserved protein with putative GTP-binding motifs that is implicated in the control of vesicle trafficking between the endoplasmic reticulum and the Golgi compartments.","AT1G68010","HPR",870.62,1.1197,0.1757,6.3725,1.86E-10,{"v":5.71e-09,"d":"5.71E-09"},"full_name=hydroxypyruvate reductase. hydroxypyruvate reductase. Encodes hydroxypyruvate reductase."]
["AT3G25260","NPF4.1",273.74,-1.7655,0.21982,-8.0312,{"v":9.65e-16,"d":"9.65E-16"},{"v":3.03e-14,"d":"3.03E-14"},"Major facilitator superfamily protein.","AT3G43960",null,46.944,4.499,0.61435,7.3231,{"v":2.42e-13,"d":"2.42E-13"},{"v":7.58e-12,"d":"7.58E-12"},"Cysteine proteinases superfamily protein. Encodes a putative cysteine proteinase. Mutants exhibit shorter root hairs under phosphate-deficient conditions.","AT5G35735",null,121.48,1.9763,0.31029,6.3693,{"v":1.9e-10,"d":"1.90E-10"},{"v":5.82e-09,"d":"5.82E-09"},"Auxin-responsive family protein."]
["AT5G58000","RTN21",490.18,-1.3632,0.16996,-8.0206,{"v":1.05e-15,"d":"1.05E-15"},{"v":3.3e-14,"d":"3.30E-14"},"Reticulon family protein.","AT5G19760",null,1773.3,0.99561,0.13598,7.3217,{"v":2.45e-13,"d":"2.45E-13"},{"v":7.65e-12,"d":"7.65E-12"},"Mitochondrial substrate carrier family protein. Encodes a novel mitochondrial carrier capable of transporting both dicarboxylates (such as malate, oxaloacetate, oxoglutarate, and maleate) and tricarboxylates (such as citrate, isocitrate, cis-aconitate, and trans-aconitate).","AT3G15790","MBD11",509.37,1.2714,0.1997,6.3666,{"v":1.93e-10,"d":"1.93E-10"},{"v":5.92e-09,"d":"5.92E-09"},"full_name=methyl-CPG-binding domain 11. methyl-CPG-binding domain 11. Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins."]
["AT3G53510","ABCG20",354.56,-1.8031,0.22481,-8.0206,{"v":1.05e-15,"d":"1.05E-15"},{"v":3.3e-14,"d":"3.30E-14"},"full_name=ATP-binding cassette G20. ABC-2 type transporter family protein. Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16).","AT1G19960",null,64.058,3.8602,0.52763,7.316,{"v":2.55e-13,"d":"2.55E-13"},{"v":7.97e-12,"d":"7.97E-12"},"transcription factor.","AT5G64940","ATH13",625.2,1.2865,0.20248,6.3535,{"v":2.1E-10,"d":"2.10E-10"},{"v":6.43e-09,"d":"6.43E-09"},"full_name=ABC2 homolog 13. ABC2 homolog 13. Encodes a member of ATH subfamily of ATP-binding cassette (ABC) proteins."]
["AT1G05150",null,1024.8,-1.1969,0.14936,-8.0137,{"v":1.11e-15,"d":"1.11E-15"},{"v":3.48e-14,"d":"3.48E-14"},"Calcium-binding tetratricopeptide family protein.","AT2G44460","BGLU28",352.09,-1.7808,0.24355,-7.3119,{"v":2.63e-13,"d":"2.63E-13"},{"v":8.2e-12,"d":"8.20E-12"},"full_name=beta glucosidase 28. beta glucosidase 28.","AT5G65207",null,605.83,1.1356,0.17874,6.3533,2.11E-10,{"v":6.43e-09,"d":"6.43E-09"},"hypothetical protein."]
["AT4G13850","GR-RBP2",3311.4,0.70639,0.088176,8.0112,1.14E-15,3.55E-14,"full_name=glycine-rich RNA-binding protein 2. glycine-rich RNA-binding protein 2. Encodes a glycine-rich RNA-binding protein. Gene expression is induced by cold.","AT1G21750","PDIL1-1",4262.1,0.76525,0.10474,7.3061,{"v":2.75e-13,"d":"2.75E-13"},{"v":8.55e-12,"d":"8.55E-12"},"full_name=PDI-like 1-1. PDI-like 1-1. Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.","AT5G42890","SCP2",2469.6,-0.96248,0.1516,-6.3486,2.17E-10,{"v":6.62e-09,"d":"6.62E-09"},"full_name=sterol carrier protein 2. sterol carrier protein 2."]
["AT2G31200","ADF6",1199.5,-1.077,0.13446,-8.01,1.15E-15,{"v":3.57e-14,"d":"3.57E-14"},"full_name=actin depolymerizing factor 6. actin depolymerizing factor 6. Encodes actin depolymerizing factor 6 (ADF6).","AT1G16920","RABA1b",469.32,1.1718,0.16047,7.3024,{"v":2.83e-13,"d":"2.83E-13"},{"v":8.77e-12,"d":"8.77E-12"},"full_name=RAB GTPase homolog A1B. RAB GTPase homolog A1B. small GTP-binding protein (Rab11)similar to YPT3/RAB11 proteins in yeast and mammals, respectively. YPT3/RAB11 is involved in intracellular protein trafficking.","AT4G27260","WES1",609.2,-1.1049,0.17409,-6.3468,{"v":2.2e-10,"d":"2.20E-10"},{"v":6.69e-09,"d":"6.69E-09"},"Auxin-responsive GH3 family protein. encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin. It is involved in camalexin biosynthesis via conjugating indole-3-carboxylic acid (ICA) and cysteine (Cys)."]
["AT2G36880","MAT3",1239.1,-0.90953,0.11385,-7.9886,1.37E-15,{"v":4.25e-14,"d":"4.25E-14"},"full_name=methionine adenosyltransferase 3. methionine adenosyltransferase 3.","AT2G29980","FAD3",2042.2,1.4572,0.20021,7.2784,{"v":3.38e-13,"d":"3.38E-13"},{"v":1.05e-11,"d":"1.05E-11"},"full_name=fatty acid desaturase 3. fatty acid desaturase 3. Endoplasmic reticulum enzyme responsible for the synthesis of 18:3 fatty acids from phospholipids. Uses cytochrome b5 as electron donor.","AT1G66760",null,235.84,1.6206,0.25536,6.3461,{"v":2.21e-10,"d":"2.21E-10"},{"v":6.71e-09,"d":"6.71E-09"},"MATE efflux family protein."]
["AT3G61890","HB-12",231.55,2.0346,0.25478,7.9856,{"v":1.4e-15,"d":"1.40E-15"},{"v":4.34e-14,"d":"4.34E-14"},"full_name=homeobox 12. homeobox 12. Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. Loss of function mutant has abnormally shaped leaves and stems.","AT5G57350","HA3",990.77,-1.2942,0.17782,-7.2783,{"v":3.38e-13,"d":"3.38E-13"},{"v":1.05e-11,"d":"1.05E-11"},"full_name=H(+)-ATPase 3. H[+]-ATPase 3. member of Plasma membrane H+-ATPase family","ATMG01080","atp9",41.215,4.4935,0.7083,6.344,2.24E-10,{"v":6.79e-09,"d":"6.79E-09"}]
["AT2G43460",null,2358.1,0.74117,0.092862,7.9813,{"v":1.45e-15,"d":"1.45E-15"},{"v":4.49e-14,"d":"4.49E-14"},"Ribosomal L38e protein family.","AT1G03890",null,273.78,-5.2218,0.71782,-7.2745,{"v":3.48e-13,"d":"3.48E-13"},{"v":1.07e-11,"d":"1.07E-11"},"RmlC-like cupins superfamily protein.","AT1G60960","IRT3",143.09,-1.8146,0.2861,-6.3426,2.26E-10,{"v":6.84e-09,"d":"6.84E-09"},"full_name=iron regulated transporter 3. iron regulated transporter 3. Encodes a plasma membrane localized zinc/iron transporter."]
["AT4G37470","KAI2",309.67,1.6119,0.20197,7.9809,{"v":1.45e-15,"d":"1.45E-15"},{"v":4.5e-14,"d":"4.50E-14"},"full_name=KARRIKIN INSENSITIVE 2. alpha/beta-Hydrolases superfamily protein. HTL belonging to the alpha/beta fold hydrolase superfamily. Mutant and over-expression studies indicates its involvement in seedling de-etiolation process.","AT1G67330","AGM2",218,2.5027,0.3442,7.2709,{"v":3.57e-13,"d":"3.57E-13"},{"v":1.1e-11,"d":"1.10E-11"},"glucuronoxylan 4-O-methyltransferase-like protein (DUF579).","AT2G22770","NAI1",331.08,-1.4568,0.23032,-6.3253,{"v":2.53e-10,"d":"2.53E-10"},{"v":7.64e-09,"d":"7.64E-09"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein. regulates the development of ER bodies. also involves in response to the endophytic fungus Piriformospora indica."]
["AT2G17990","AtCAP2",624.1,1.103,0.13822,7.98,{"v":1.46e-15,"d":"1.46E-15"},{"v":4.52e-14,"d":"4.52E-14"},"polyamine-modulated factor 1-binding protein.","AT3G05880","RCI2A",1532.1,-1.1209,0.15454,-7.2532,{"v":4.07e-13,"d":"4.07E-13"},1.25E-11,"full_name=RARE-COLD-INDUCIBLE 2A. Low temperature and salt responsive protein family. Induced by low temperatures, dehydration and salt stress and ABA. Encodes a small (54 amino acids), highly hydrophobic protein that bears two potential transmembrane domains.","AT1G43780","scpl44",178.58,-1.9428,0.30723,-6.3235,{"v":2.56e-10,"d":"2.56E-10"},{"v":7.72e-09,"d":"7.72E-09"},"full_name=serine carboxypeptidase-like 44. serine carboxypeptidase-like 44."]
["AT5G41520","RPS10B",3755,0.74319,0.093152,7.9783,1.48E-15,{"v":4.58e-14,"d":"4.58E-14"},"full_name=ribosomal protein S10e B. RNA binding Plectin/S10 domain-containing protein. The gene belongs to the three-member Arabidopsis gene family encoding the eukaryote-specific protein S10e of the small cytoplasmic ribosomal subunit.","AT1G65980","TPX1",4437.5,-0.74252,0.10256,-7.2397,{"v":4.5E-13,"d":"4.50E-13"},1.38E-11,"full_name=thioredoxin-dependent peroxidase 1. thioredoxin-dependent peroxidase 1. thioredoxin-dependent peroxidase","AT4G02410","LECRK-IV.3",48.802,3.4806,0.55069,6.3205,{"v":2.61e-10,"d":"2.61E-10"},{"v":7.85e-09,"d":"7.85E-09"},"Concanavalin A-like lectin protein kinase family protein."]
["AT3G17790","PAP17",1534.1,-1.4268,0.17904,-7.9689,{"v":1.6E-15,"d":"1.60E-15"},{"v":4.93e-14,"d":"4.93E-14"},"full_name=purple acid phosphatase 17. purple acid phosphatase 17. Expression is upregulated in the shoot of cax1/cax3 mutant and is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots.","AT3G28940",null,1196.3,-1.0185,0.14082,-7.2325,4.74E-13,1.46E-11,"AIG2-like (avirulence induced gene) family protein.","AT2G39420","MAGL8",303.82,1.4156,0.22405,6.3181,{"v":2.65e-10,"d":"2.65E-10"},{"v":7.96e-09,"d":"7.96E-09"},"alpha/beta-Hydrolases superfamily protein."]
["AT3G05320","OFT1",154.98,-2.1572,0.27085,-7.9644,1.66E-15,{"v":5.11e-14,"d":"5.11E-14"},"O-fucosyltransferase family protein.","AT2G40460",null,274.71,-5.1866,0.7176,-7.2276,{"v":4.92e-13,"d":"4.92E-13"},{"v":1.51e-11,"d":"1.51E-11"},"Major facilitator superfamily protein.","AT5G55750",null,57.147,3.031,0.4798,6.3171,{"v":2.67e-10,"d":"2.67E-10"},{"v":8e-09,"d":"8.00E-09"},"hydroxyproline-rich glycoprotein family protein."]
["AT1G26800","MPSR1",98.809,3.1022,0.38999,7.9545,{"v":1.8e-15,"d":"1.80E-15"},{"v":5.52e-14,"d":"5.52E-14"},"RING/U-box superfamily protein.","AT1G35680","RPL21C",1746.3,0.77706,0.10755,7.2254,{"v":5e-13,"d":"5.00E-13"},{"v":1.53e-11,"d":"1.53E-11"},"full_name=chloroplast ribosomal protein L21. Ribosomal protein L21. Encodes a chloroplast ribosomal protein L21 that is required for chloroplast development and embryogenesis.","AT4G29950",null,221.72,1.5453,0.24464,6.3167,{"v":2.67e-10,"d":"2.67E-10"},{"v":8.01e-09,"d":"8.01E-09"},"Ypt/Rab-GAP domain of gyp1p superfamily protein."]
["AT4G27430","CIP7",785.03,-1.0667,0.13421,-7.9479,{"v":1.9e-15,"d":"1.90E-15"},{"v":5.82e-14,"d":"5.82E-14"},"full_name=COP1-interacting protein 7. COP1-interacting protein 7. Positive regulator of light-regulated genes. Novel nuclear protein which requires light for its high level expression.","AT1G21310","EXT3",11425,1.228,0.17,7.2236,{"v":5.06e-13,"d":"5.06E-13"},{"v":1.55e-11,"d":"1.55E-11"},"full_name=extensin 3. extensin 3. Encodes extensin 3.","AT3G61890","HB-12",379.28,1.6344,0.25897,6.3111,{"v":2.77e-10,"d":"2.77E-10"},{"v":8.29e-09,"d":"8.29E-09"},"full_name=homeobox 12. homeobox 12. Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. Loss of function mutant has abnormally shaped leaves and stems."]
["AT4G02930",null,1815.9,0.87144,0.10969,7.9449,1.94E-15,{"v":5.95e-14,"d":"5.95E-14"},"GTP binding Elongation factor Tu family protein.","AT5G24380","YSL2",467.42,-1.273,0.17635,-7.2182,{"v":5.27e-13,"d":"5.27E-13"},{"v":1.61e-11,"d":"1.61E-11"},"full_name=YELLOW STRIPE like 2. YELLOW STRIPE like 2. closest Arabidopsis homolog of Zea maize metal-phytosiderophore/metal-nicotianamine transporter ZmYS1","AT5G58690","PLC5",102.81,2.1472,0.34026,6.3104,{"v":2.78e-10,"d":"2.78E-10"},{"v":8.32e-09,"d":"8.32E-09"},"full_name=phosphatidylinositol-speciwc phospholipase C5. phosphatidylinositol-speciwc phospholipase C5."]
["AT4G00360","CYP86A2",462,-1.2781,0.16091,-7.9429,{"v":1.97e-15,"d":"1.97E-15"},{"v":6.03e-14,"d":"6.03E-14"},"full_name=cytochrome P450, family 86, subfamily A, polypeptide 2. cytochrome P450, family 86, subfamily A, polypeptide 2. Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems.","AT4G10040","CYTC-2",217.35,-1.6329,0.22631,-7.2151,{"v":5.39e-13,"d":"5.39E-13"},1.64E-11,"full_name=cytochrome c-2. cytochrome c-2. Encodes cytochrome c. Promoter directs preferential expression in vascular tissues of cotyledons, leaves, roots, and hypocotyls, and in anthers.","AT4G17730","SYP23",1268.1,0.86334,0.13694,6.3044,{"v":2.89e-10,"d":"2.89E-10"},{"v":8.63e-09,"d":"8.63E-09"},"full_name=syntaxin of plants 23. syntaxin of plants 23. member of SYP2 Gene Family"]
["AT4G33740",null,956.16,-1.0285,0.12953,-7.9403,{"v":2.02e-15,"d":"2.02E-15"},{"v":6.15e-14,"d":"6.15E-14"},"myb-like protein X.","AT1G07180","NDA1",69.85,-3.6758,0.50963,-7.2127,{"v":5.49e-13,"d":"5.49E-13"},{"v":1.67e-11,"d":"1.67E-11"},"full_name=alternative NAD(P)H dehydrogenase 1. alternative NAD(P)H dehydrogenase 1. Internal NAD(P)H dehydrogenase in mitochondria. The predicted protein sequence has high homology with other designated NAD(P)H DHs from microorganisms; the capacity for matrix NAD(P)H oxidation via the rotenone-insensitive pathway is significantly reduced in the Atndi1 mutant plant line; the in vitro translation product of AtNDI1 is imported into isolated mitochondria and located on the inside of the inner membrane.","AT4G03420",null,139.53,2.029,0.32237,6.2939,{"v":3.1e-10,"d":"3.10E-10"},{"v":9.22e-09,"d":"9.22E-09"},"hypothetical protein (DUF789)."]
["AT1G75220","ERDL6",1035.4,-0.94601,0.1193,-7.9295,{"v":2.2e-15,"d":"2.20E-15"},{"v":6.7e-14,"d":"6.70E-14"},"full_name=ERD6-like 6. Major facilitator superfamily protein. Encodes a vacuolar glucose exporter that is induced in response to factors that activate vacuolar glucose pools like darkness, heat stress and wounding and repressed during conditions that trigger glucose accumulation in the vacuole like cold stress and external sugar supply.","AT1G06350","ADS4",77.895,2.8956,0.40221,7.1993,{"v":6.05e-13,"d":"6.05E-13"},{"v":1.84e-11,"d":"1.84E-11"},"full_name=delta 9 desaturase 4. Fatty acid desaturase family protein.","AT4G37550","IAMH1",833.43,1.0316,0.16392,6.2937,{"v":3.1e-10,"d":"3.10E-10"},{"v":9.22e-09,"d":"9.22E-09"},"Acetamidase/Formamidase family protein."]
["AT3G49300",null,98.696,-3.6291,0.45841,-7.9167,{"v":2.44e-15,"d":"2.44E-15"},{"v":7.42e-14,"d":"7.42E-14"},"proline-rich family protein.","AT4G04640","ATPC1",2139.2,0.78888,0.10958,7.1991,{"v":6.06e-13,"d":"6.06E-13"},{"v":1.84e-11,"d":"1.84E-11"},"ATPase, F1 complex, gamma subunit protein. One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase.","AT3G21200","PGR7",357.47,-1.3409,0.21326,-6.2875,{"v":3.23e-10,"d":"3.23E-10"},{"v":9.58e-09,"d":"9.58E-09"},"full_name=proton gradient regulation 7. proton gradient regulation 7."]
["AT2G21490","LEA",378.11,-2.5576,0.32308,-7.9164,2.45E-15,{"v":7.42e-14,"d":"7.42E-14"},"full_name=dehydrin LEA. dehydrin LEA.","AT3G61680","PLIP1",168.72,-2.3417,0.32536,-7.1972,6.15E-13,{"v":1.86e-11,"d":"1.86E-11"},"alpha/beta-Hydrolases superfamily protein.","AT5G24590","TIP",369.69,1.2114,0.19275,6.285,3.28E-10,{"v":9.72e-09,"d":"9.72E-09"},"full_name=TCV-interacting protein. TCV-interacting protein. Member of NAc protein family. Interacts with turnip crinkle virus (TCV) capsid protein. Transcription factor involved in regulating the defense response of Arabidopsis to TCV."]
["AT5G59690",null,759.32,1.0223,0.12924,7.9099,{"v":2.58e-15,"d":"2.58E-15"},{"v":7.81e-14,"d":"7.81E-14"},"Histone superfamily protein.","AT4G28250","EXPB3",46.018,4.0939,0.56896,7.1954,{"v":6.23e-13,"d":"6.23E-13"},{"v":1.88e-11,"d":"1.88E-11"},"full_name=expansin B3. expansin B3. putative beta-expansin/allergen protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","AT5G55470","NHX3",171.02,1.8495,0.29453,6.2794,{"v":3.4e-10,"d":"3.40E-10"},{"v":1.01e-08,"d":"1.01E-08"},"full_name=Na+/H+ (sodium hydrogen) exchanger 3. Na+/H+ (sodium hydrogen) exchanger 3. member of Sodium proton exchanger family"]
["AT2G37270","RPS5B",2623.2,0.71562,0.090508,7.9067,{"v":2.64e-15,"d":"2.64E-15"},{"v":8E-14,"d":"8.00E-14"},"full_name=ribosomal protein 5B. ribosomal protein 5B. One of two genes encoding the ribosomal protein S5. Expressed at a lower level compared to ATRPS5A.","AT4G16620","UMAMIT8",286.5,-1.742,0.24215,-7.1939,{"v":6.29e-13,"d":"6.29E-13"},{"v":1.9e-11,"d":"1.90E-11"},"full_name=Usually multiple acids move in and out Transporters 8. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT1G67580","CDKG2",575.4,1.1544,0.1839,6.2771,3.45E-10,{"v":1.02E-8,"d":"1.02E-08"},"Protein kinase superfamily protein."]
["AT2G44798",null,333.59,-2.8728,0.3635,-7.9032,2.72E-15,{"v":8.21e-14,"d":"8.21E-14"},"Natural antisense transcript overlaps with AT2G44800. Potential natural antisense gene, locus overlaps with AT2G44800 Natural antisense transcript overlaps with AT2G44800","AT3G10340","PAL4",86.569,-2.918,0.40576,-7.1913,{"v":6.42e-13,"d":"6.42E-13"},{"v":1.93e-11,"d":"1.93E-11"},"full_name=phenylalanine ammonia-lyase 4. phenylalanine ammonia-lyase 4. Encodes PAL4, a putative a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).","AT5G24930","COL4",482.29,1.1112,0.17737,6.2649,3.73E-10,{"v":1.1e-08,"d":"1.10E-08"},"full_name=CONSTANS-like 4. zinc finger CONSTANS-like protein."]
["AT4G03400","DFL2",355.8,1.585,0.20063,7.9002,{"v":2.78e-15,"d":"2.78E-15"},{"v":8.4e-14,"d":"8.40E-14"},"full_name=DWARF IN LIGHT 2. Auxin-responsive GH3 family protein. Encodes a GH3-related gene involved in red light-specific hypocotyl elongation. Analysis of sense and antisense transgenic plants suggests that DFL2 is located downstream of red light signal transduction and determines the degree of hypocotyl elongation.","AT4G24240","WRKY7",68.837,3.1077,0.43226,7.1894,{"v":6.51e-13,"d":"6.51E-13"},{"v":1.96e-11,"d":"1.96E-11"},"full_name=WRKY DNA-binding protein 7. WRKY DNA-binding protein 7. Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family.","AT3G45650","NAXT1",100.56,2.1255,0.33939,6.2627,{"v":3.78e-10,"d":"3.78E-10"},{"v":1.11E-8,"d":"1.11E-08"},"full_name=nitrate excretion transporter1. nitrate excretion transporter1. Encodes a nitrate efflux transporter NAXT1 (for NITRATE EXCRETION TRANSPORTER1). Localized to the plasma membrane. NAXT1 belongs to a subclass of seven NAXT members from the large NITRATE TRANSPORTER1/PEPTIDE TRANSPORTER family and is mainly expressed in the cortex of mature roots."]
["AT5G42780","HB27",107.13,-2.6335,0.33377,-7.8902,{"v":3.02e-15,"d":"3.02E-15"},{"v":9.09e-14,"d":"9.09E-14"},"full_name=homeobox protein 27. homeobox protein 27.","AT2G17420","NTRA",1190.5,1.0193,0.14182,7.1869,6.63E-13,1.99E-11,"full_name=NADPH-dependent thioredoxin reductase A. NADPH-dependent thioredoxin reductase A. NADPH-dependent thioredoxin reductase, major cytosolic isoform","AT1G13270","MAP1C",377.38,-1.2659,0.20213,-6.2625,{"v":3.79e-10,"d":"3.79E-10"},{"v":1.11E-8,"d":"1.11E-08"},"full_name=methionine aminopeptidase 1B. methionine aminopeptidase 1B. Encodes a methionine aminopeptidase formerly called MAP1B, renamed to MAP1C."]
["AT5G64740","CESA6",1966.4,-0.83998,0.10647,-7.8891,{"v":3.04e-15,"d":"3.04E-15"},{"v":9.15e-14,"d":"9.15E-14"},"full_name=cellulose synthase 6. cellulose synthase 6. Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.","AT1G33970","IAN9",711.42,-1.1048,0.15373,-7.1865,{"v":6.65e-13,"d":"6.65E-13"},1.99E-11,"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT3G12145","FLR1",134.07,-2.1488,0.34341,-6.2574,{"v":3.91e-10,"d":"3.91E-10"},{"v":1.15E-8,"d":"1.15E-08"},"full_name=FLOR1. Leucine-rich repeat (LRR) family protein. A novel leucine-rich repeat protein. Interacts directly with MADS domain transcription factor."]
["AT3G21300","TRM2A",279.78,1.5794,0.20022,7.8886,3.06E-15,{"v":9.17e-14,"d":"9.17E-14"},"RNA methyltransferase family protein.","AT3G58200",null,145.25,-2.2622,0.31482,-7.1856,{"v":6.69e-13,"d":"6.69E-13"},{"v":2e-11,"d":"2.00E-11"},"TRAF-like family protein.","AT5G01040","LAC8",118.19,-2.0433,0.32678,-6.2528,4.03E-10,{"v":1.18E-8,"d":"1.18E-08"},"full_name=laccase 8. laccase 8. putative laccase, knockout mutant showed early flowering"]
["AT1G24460","TNO1",1152.5,-1.036,0.1315,-7.8783,{"v":3.32e-15,"d":"3.32E-15"},{"v":9.95e-14,"d":"9.95E-14"},"full_name=TGN-localized SYP41 interacting protein. TGN-related, localized SYP41 interacting protein. Encodes a novel protein that co-immunoprecipitates with SYP41. It is involved in vacuolar trafficking and salt tolerance, potentially via a role in vesicle fusion and in maintaining TGN structure or identity. Mutants display delayed formation of the Brefeldin A (BFA) compartment in cotyledons upon application of BFA.","AT5G37790",null,123.09,2.1276,0.29621,7.1828,{"v":6.83e-13,"d":"6.83E-13"},{"v":2.04e-11,"d":"2.04E-11"},"Protein kinase superfamily protein.","AT4G30600",null,1073.4,0.90795,0.14529,6.2493,{"v":4.12e-10,"d":"4.12E-10"},{"v":1.21e-08,"d":"1.21E-08"},"signal recognition particle receptor alpha subunit family protein."]
["AT1G20970",null,1619,-0.99687,0.12663,-7.8722,{"v":3.48e-15,"d":"3.48E-15"},1.04E-13,"calponin-like domain protein.","AT3G29090","PME31",475.08,-1.1735,0.16373,-7.1671,{"v":7.66e-13,"d":"7.66E-13"},{"v":2.28e-11,"d":"2.28E-11"},"full_name=pectin methylesterase 31. pectin methylesterase 31. Encodes an atypical pectin methylesterase that does not require salt for its activity and has a blockwise mode of pectin demethylesterification.","AT5G65360","H3.1",229.66,-1.4319,0.22928,-6.2451,{"v":4.24e-10,"d":"4.24E-10"},{"v":1.24E-8,"d":"1.24E-08"},"Histone superfamily protein."]
["AT2G05810",null,292.83,-1.7731,0.22525,-7.8716,{"v":3.5e-15,"d":"3.50E-15"},{"v":1.05e-13,"d":"1.05E-13"},"ARM repeat superfamily protein.","AT1G21590",null,682.15,1.0062,0.14042,7.1654,{"v":7.75e-13,"d":"7.75E-13"},2.31E-11,"kinase with adenine nucleotide alpha hydrolases-like domain-containing protein.","AT2G18960","HA1",4694.5,0.74614,0.1196,6.2388,{"v":4.41e-10,"d":"4.41E-10"},{"v":1.29E-8,"d":"1.29E-08"},"full_name=H(+)-ATPase 1. H[+]-ATPase 1. Encodes a plasma membrane proton ATPase. Mutants have a reduced ability to close their stomata in response to drought and are affected in stomatal but not seed responsiveness to ABA."]
["AT5G28050","GSDA",747.2,-1.1431,0.14526,-7.8693,3.57E-15,1.06E-13,"Cytidine/deoxycytidylate deaminase family protein.","AT5G01210",null,397.54,-1.3329,0.18612,-7.1613,{"v":7.99e-13,"d":"7.99E-13"},{"v":2.38e-11,"d":"2.38E-11"},"HXXXD-type acyl-transferase family protein.","AT4G38660",null,56.677,-3.0229,0.4846,-6.238,{"v":4.43e-10,"d":"4.43E-10"},{"v":1.29E-8,"d":"1.29E-08"},"Pathogenesis-related thaumatin superfamily protein."]
["AT5G19290","MAGL16",734.95,-1.0157,0.12913,-7.8654,{"v":3.68e-15,"d":"3.68E-15"},{"v":1.1E-13,"d":"1.10E-13"},"alpha/beta-Hydrolases superfamily protein.","AT1G60160","KT12",520.32,1.387,0.19393,7.152,{"v":8.55e-13,"d":"8.55E-13"},{"v":2.53e-11,"d":"2.53E-11"},"Potassium transporter family protein.","AT3G06325",null,330.48,4.6072,0.73877,6.2364,4.48E-10,{"v":1.3e-08,"d":"1.30E-08"},"Natural antisense transcript overlaps with AT3G41762. Natural antisense transcript overlaps with AT3G41762"]
["AT4G21490","NDB3",72.957,3.799,0.48339,7.8592,{"v":3.87e-15,"d":"3.87E-15"},{"v":1.15e-13,"d":"1.15E-13"},"full_name=NAD(P)H dehydrogenase B3. NAD(P)H dehydrogenase B3.","AT4G24150","GRF8",617.56,-1.0952,0.15313,-7.1519,{"v":8.56e-13,"d":"8.56E-13"},{"v":2.53e-11,"d":"2.53E-11"},"full_name=growth-regulating factor 8. growth-regulating factor 8. Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower.","AT2G26190","IQM4",223.41,1.447,0.23207,6.2352,{"v":4.51e-10,"d":"4.51E-10"},{"v":1.31E-8,"d":"1.31E-08"},"calmodulin-binding family protein."]
["AT1G04220","KCS2",340.44,-1.5516,0.19748,-7.857,{"v":3.93e-15,"d":"3.93E-15"},{"v":1.17e-13,"d":"1.17E-13"},"full_name=3-ketoacyl-CoA synthase 2. 3-ketoacyl-CoA synthase 2. Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT3G08690","UBC11",508.13,-1.1822,0.1653,-7.1519,{"v":8.56e-13,"d":"8.56E-13"},{"v":2.53e-11,"d":"2.53E-11"},"full_name=ubiquitin-conjugating enzyme 11. ubiquitin-conjugating enzyme 11.","AT4G18280",null,100.74,2.1169,0.33958,6.2338,{"v":4.55e-10,"d":"4.55E-10"},{"v":1.32e-08,"d":"1.32E-08"},"glycine-rich cell wall protein-like protein."]
["AT4G01037","WTF1",1259.7,0.86136,0.10974,7.8492,{"v":4.19e-15,"d":"4.19E-15"},1.24E-13,"full_name=what's this factor?. Ubiquitin carboxyl-terminal hydrolase family protein.","AT3G28270","AFL1",44.22,4.8696,0.68093,7.1514,{"v":8.59e-13,"d":"8.59E-13"},{"v":2.54e-11,"d":"2.54E-11"},"transmembrane protein, putative (DUF677).","AT2G01020",null,1027.1,1.5608,0.25074,6.2246,{"v":4.83e-10,"d":"4.83E-10"},{"v":1.4E-8,"d":"1.40E-08"},"5.8SrRNA. 5.8SrRNA"]
["AT2G24270","ALDH11A3",3346.2,-0.96509,0.12297,-7.8485,{"v":4.21e-15,"d":"4.21E-15"},1.25E-13,"full_name=aldehyde dehydrogenase 11A3. aldehyde dehydrogenase 11A3. Encodes a protein with non-phosphorylating NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity. The activity of the enzyme was determined from leaf extracts; the enzyme has not been purified to confirm activity.","AT1G62380","ACO2",1093.5,-1.1052,0.15455,-7.1511,{"v":8.61e-13,"d":"8.61E-13"},{"v":2.54e-11,"d":"2.54E-11"},"full_name=ACC oxidase 2. ACC oxidase 2. Encodes a protein similar to 1-aminocyclopropane-1-carboxylic oxidase (ACC oxidase). Expression of the AtACO2 transcripts is affected by ethylene.","AT2G43360","BIO2",160.61,-1.6638,0.2674,-6.2221,{"v":4.91e-10,"d":"4.91E-10"},{"v":1.42E-8,"d":"1.42E-08"},"full_name=BIOTIN AUXOTROPH 2. Radical SAM superfamily protein. Catalyzes the conversion of dethiobiotin to biotin."]
["AT3G05500","LDAP3",2323,-0.88558,0.11286,-7.8466,{"v":4.27e-15,"d":"4.27E-15"},{"v":1.26e-13,"d":"1.26E-13"},"Rubber elongation factor protein (REF). Encodes a protein that associates with lipid droplet surfaces.","AT4G22880","LDOX",1473.8,1.0139,0.14186,7.1471,{"v":8.86e-13,"d":"8.86E-13"},{"v":2.61e-11,"d":"2.61E-11"},"full_name=leucoanthocyanidin dioxygenase. leucoanthocyanidin dioxygenase. encodes leucoanthocyanidin dioxygenase, which is involved in proanthocyanin biosynthesis. Mutant analysis suggests that this gene is also involved in vacuole formation.","AT5G05100","MUG13.4",691.94,0.99403,0.15983,6.2193,{"v":4.99e-10,"d":"4.99E-10"},{"v":1.44E-8,"d":"1.44E-08"},"Single-stranded nucleic acid binding R3H protein."]
["AT1G58270","ZW9",2753.1,0.79927,0.10186,7.8464,{"v":4.28e-15,"d":"4.28E-15"},{"v":1.26e-13,"d":"1.26E-13"},"TRAF-like family protein. ZW9 mRNA, complete cds","AT4G17550","G3Pp4",728.36,-1.0859,0.152,-7.1441,{"v":9.06e-13,"d":"9.06E-13"},{"v":2.66e-11,"d":"2.66E-11"},"full_name=glycerol-3-phosphate permease 4. Major facilitator superfamily protein. Encodes a member of the phosphate starvation-induced glycerol-3-phosphate permease gene family: AT3G47420(G3Pp1), AT4G25220(G3Pp2), AT1G30560(G3Pp3), AT4G17550(G3Pp4) and AT2G13100(G3Pp5).","AT5G19400","SMG7",635.9,1.0133,0.16296,6.2183,{"v":5.02e-10,"d":"5.02E-10"},{"v":1.45e-08,"d":"1.45E-08"},"Telomerase activating protein Est1. Encodes SMG7, a protein that possesses an evolutionarily conserved EST1 domain and exhibits strong homology to human SMG6 (EST1A) and SMG7 (EST1C) proteins. SMG7 plays an evolutionarily conserved role in nonsense-mediated RNA decay (NMD). Required for exit from meiosis. Hypomorphic smg7 alleles render mutant plants sterile by causing an unusual cell-cycle arrest in anaphase II that is characterized by delayed chromosome decondensation and aberrant rearrangement of the meiotic spindle. Disruption of SMG7 causes embryonic lethality."]
["AT5G01180","PTR5",138.41,-2.4549,0.31293,-7.8449,{"v":4.33e-15,"d":"4.33E-15"},{"v":1.27e-13,"d":"1.27E-13"},"full_name=peptide transporter 5. peptide transporter 5. Encodes a dipeptide transporter expressed in pollen and ovules during early seed development. GFP-tagged PTR5 localizes to the plasma membrane.","AT1G66390","MYB90",818.28,-1.1491,0.16088,-7.1424,{"v":9.17e-13,"d":"9.17E-13"},{"v":2.69e-11,"d":"2.69E-11"},"full_name=myb domain protein 90. myb domain protein 90. production of anthocyanin pigment 2 protein (PAP2)","AT4G01610","ATCATHB3",17523,0.73221,0.11776,6.2176,{"v":5.05e-10,"d":"5.05E-10"},{"v":1.45e-08,"d":"1.45E-08"},"Cysteine proteinases superfamily protein."]
["AT5G30510","RPS1",3410.3,0.69995,0.089225,7.8447,{"v":4.34e-15,"d":"4.34E-15"},{"v":1.27e-13,"d":"1.27E-13"},"full_name=ribosomal protein S1. ribosomal protein S1.","AT1G29090",null,104.36,10.581,1.4819,7.1406,{"v":9.29e-13,"d":"9.29E-13"},2.72E-11,"Cysteine proteinases superfamily protein.","AT4G22920","NYE1",221.98,1.6106,0.25909,6.2162,5.09E-10,{"v":1.46E-8,"d":"1.46E-08"},"full_name=NON-YELLOWING 1. non-yellowing 1. Similar to the tomato senescence-inducible chloroplast stay-green protein 1. It is upregulated during maximal senescence in the Arabidopsis life cycle, especially in senescent leaves. Acts antagonistically with SGR2 to balance chlorophyll catabolism in chloroplasts with the dismantling and remobilizing of other cellular components in senescing leaf cells."]
["AT1G24735",null,903.44,-1.0676,0.13609,-7.8447,{"v":4.34e-15,"d":"4.34E-15"},{"v":1.27e-13,"d":"1.27E-13"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT5G56150","UBC30",808.73,-1.1682,0.16383,-7.1306,{"v":9.99e-13,"d":"9.99E-13"},2.92E-11,"full_name=ubiquitin-conjugating enzyme 30. ubiquitin-conjugating enzyme 30.","AT3G48510",null,121.02,2.2685,0.36504,6.2144,{"v":5.15e-10,"d":"5.15E-10"},{"v":1.48E-8,"d":"1.48E-08"},"AtIII18x5-like protein."]
["AT2G36695",null,91.54,-2.9346,0.3742,-7.8425,4.42E-15,{"v":1.29e-13,"d":"1.29E-13"},"hypothetical protein.","AT5G42420","URGT3",467.62,1.1758,0.16496,7.1276,{"v":1.02e-12,"d":"1.02E-12"},{"v":2.98e-11,"d":"2.98E-11"},"Nucleotide-sugar transporter family protein.","AT4G35070",null,224.78,1.5782,0.25403,6.2126,{"v":5.21e-10,"d":"5.21E-10"},{"v":1.49e-08,"d":"1.49E-08"},"SBP (S-ribonuclease binding protein) family protein."]
["AT3G48500","PDE312",1669.3,0.92026,0.11734,7.8424,4.42E-15,{"v":1.29e-13,"d":"1.29E-13"},"full_name=PIGMENT DEFECTIVE 312. Nucleic acid-binding, OB-fold-like protein.","AT2G19900","NADP-ME1",1187.1,-3.3522,0.47044,-7.1257,1.04E-12,{"v":3.02e-11,"d":"3.02E-11"},"full_name=NADP-malic enzyme 1. NADP-malic enzyme 1. The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals. The enzyme is active in vitro and appears to function as a homohexamer or homooctamer. It is believed to be a cytosolic protein.","AT5G25190","ESE3",167,-1.9649,0.31644,-6.2094,{"v":5.32e-10,"d":"5.32E-10"},{"v":1.52E-8,"d":"1.52E-08"},"full_name=ethylene and salt inducible 3. Integrase-type DNA-binding superfamily protein. encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11."]
["AT4G00270","GeBP",724.79,-1.278,0.16306,-7.8377,4.59E-15,{"v":1.34e-13,"d":"1.34E-13"},"DNA-binding storekeeper protein-related transcriptional regulator.","AT5G50090",null,156.66,-3.1173,0.43786,-7.1195,1.08E-12,{"v":3.16e-11,"d":"3.16E-11"},"D-ribose-binding periplasmic protein.","AT1G80300","NTT1",1978.3,0.82568,0.13301,6.2078,{"v":5.37e-10,"d":"5.37E-10"},{"v":1.53e-08,"d":"1.53E-08"},"full_name=nucleotide transporter 1. nucleotide transporter 1. Encodes an ATP/ADP transporter."]
["AT1G30220","INT2",246.16,-1.8822,0.24034,-7.8313,4.83E-15,{"v":1.41e-13,"d":"1.41E-13"},"full_name=inositol transporter 2. inositol transporter 2. Inositol transporter presenting conserved extracellular loop domains homologs of plexins/semaphorin/integrin (PSI) domains from animal type I receptors.","AT1G56170","NF-YC2",174.28,-1.8804,0.26425,-7.1162,{"v":1.11e-12,"d":"1.11E-12"},{"v":3.23e-11,"d":"3.23E-11"},"full_name=nuclear factor Y, subunit C2. nuclear factor Y, subunit C2. Encodes a protein with similarity to a subunit of the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5B) and expressed in vegetative and reproductive tissues","AT5G61310",null,106.14,-2.122,0.34189,-6.2065,{"v":5.42e-10,"d":"5.42E-10"},{"v":1.54e-08,"d":"1.54E-08"},"Cytochrome c oxidase subunit Vc family protein."]
["AT2G36160",null,4011.3,0.68556,0.087638,7.8227,5.17E-15,{"v":1.51e-13,"d":"1.51E-13"},"Ribosomal protein S11 family protein.","AT4G35480","RHA3B",176.22,-1.8756,0.26388,-7.1079,1.18E-12,{"v":3.42e-11,"d":"3.42E-11"},"full_name=RING-H2 finger A3B. RING-H2 finger A3B. Encodes a putative RING-H2 finger protein RHA3b.","AT5G63980","SAL1",418.87,-1.1647,0.18768,-6.2057,{"v":5.44e-10,"d":"5.44E-10"},{"v":1.55E-8,"d":"1.55E-08"},"SAL1 phosphatase-like protein. Encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought (negative regulator of drought tolerance), and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration due to higher accumulation of the second messenger, inositol (1,4,5)- triphosphate (IP(3)). Involved in degradation of small mRNAs. Mutants also affect the accumulation of miRNA target cleavage products. Regulates light-dependent repression of hypocotyl elongation and flowering time via its 3'(2'),5'-bisphosphate nucleotidase activity."]
["AT4G37510",null,929.49,1.0093,0.12904,7.8216,{"v":5.22e-15,"d":"5.22E-15"},{"v":1.52e-13,"d":"1.52E-13"},"Ribonuclease III family protein.","AT4G32340",null,121.37,2.2385,0.31497,7.1069,1.19E-12,{"v":3.44e-11,"d":"3.44E-11"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT5G27395",null,190.84,-1.5914,0.25664,-6.201,{"v":5.61e-10,"d":"5.61E-10"},{"v":1.59E-8,"d":"1.59E-08"},"Mitochondrial inner membrane translocase complex, subunit Tim44-related protein."]
["AT5G41340","UBC4",672.85,-1.1,0.14063,-7.8215,{"v":5.22e-15,"d":"5.22E-15"},{"v":1.52e-13,"d":"1.52E-13"},"full_name=ubiquitin conjugating enzyme 4. ubiquitin conjugating enzyme 4. Belongs to Ubiquitin conjugating enzyme family. Gene expression is developmentally regulated.","AT3G52880","MDAR1",1508.9,0.78588,0.11067,7.101,1.24E-12,{"v":3.58e-11,"d":"3.58E-11"},"full_name=monodehydroascorbate reductase 1. monodehydroascorbate reductase 1. Encodes a peroxisomal monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2","AT2G46800","ZAT",1198.2,0.84683,0.13662,6.1984,{"v":5.7E-10,"d":"5.70E-10"},{"v":1.62e-08,"d":"1.62E-08"},"full_name=zinc transporter of Arabidopsis thaliana. zinc transporter. Encodes a member of the zinc transporter (ZAT) and cation diffusion facilitator (CDF) families. It is expressed throughout the plant, especially in dividing, differentiating and expanding cells. The protein is localized to the vacuolar membrane. Mediates Zn ion homeostasis."]
["AT2G42170",null,894.13,-0.93917,0.1201,-7.8196,{"v":5.3e-15,"d":"5.30E-15"},1.54E-13,"Actin family protein.","AT5G15580","LNG1",248.05,1.5821,0.22287,7.0988,{"v":1.26e-12,"d":"1.26E-12"},3.63E-11,"full_name=LONGIFOLIA1. longifolia1. Encodes LONGIFOLIA1 (LNG1). Regulates leaf morphology by promoting cell expansion in the leaf-length direction. The LNG1 homologue LNG2 (At3g02170) has similar function.","AT2G06950",null,761.91,-1.0518,0.16984,-6.1933,{"v":5.89e-10,"d":"5.89E-10"},{"v":1.67e-08,"d":"1.67E-08"},"transposable_element_gene."]
["AT2G04170",null,119.03,2.486,0.318,7.8175,{"v":5.39e-15,"d":"5.39E-15"},{"v":1.56e-13,"d":"1.56E-13"},"TRAF-like family protein.","AT1G27300",null,1190.4,-1.1801,0.16624,-7.0988,{"v":1.26e-12,"d":"1.26E-12"},3.63E-11,"transmembrane protein.","AT2G41230","ORS1",42.099,-4.2538,0.6869,-6.1928,{"v":5.91e-10,"d":"5.91E-10"},{"v":1.67e-08,"d":"1.67E-08"},"full_name=ORGAN SIZE RELATED 1. ORGAN SIZE-like protein. Encodes an ER-localized plant hormone-responsive gene and appears to act redundantly with ARGOS and ARL during organ growth."]
["AT1G60680",null,687.61,-1.4285,0.18288,-7.811,{"v":5.67e-15,"d":"5.67E-15"},{"v":1.64e-13,"d":"1.64E-13"},"NAD(P)-linked oxidoreductase superfamily protein.","AT3G44310","NIT1",5364.6,-0.82277,0.11591,-7.0981,1.27E-12,{"v":3.64e-11,"d":"3.64E-11"},"full_name=nitrilase 1. nitrilase 1. Mutants are resistant to indole-3-acetonitrile (IAN). NIT1 catalyzes the terminal activation step in indole-acetic acid biosynthesis. Predominantly expressed isoform of nitrilase isoenzyme family. Aggregation of NIT1 in cells directly abutting wound sites is one of the earliest events associated with wound and herbicide-induced cell death. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. It is also involved in the conversion of IAN to IAM (indole-3-acetamide) and other non-auxin-related metabolic processes.","AT4G10450",null,599.31,-1.085,0.17534,-6.1877,{"v":6.11e-10,"d":"6.11E-10"},{"v":1.72e-08,"d":"1.72E-08"},"Ribosomal protein L6 family."]
["AT2G27920","SCPL51",88.635,3.0986,0.39673,7.8105,{"v":5.7e-15,"d":"5.70E-15"},{"v":1.64e-13,"d":"1.64E-13"},"full_name=serine carboxypeptidase-like 51. serine carboxypeptidase-like 51.","AT1G67740","PSBY",1076.1,1.0063,0.14183,7.0953,1.29E-12,3.71E-11,"full_name=photosystem II BY. photosystem II BY. PsbY precursor (psbY) mRNA. This single nuclear gene is imported into the chloroplasts where it is processed into two integral membrane proteins with identical topology (PsbY-1 and PsbY-2). The protein appears to bind manganese but its role is not well understood.","AT1G74470",null,6453.5,1.0271,0.16626,6.1776,{"v":6.51e-10,"d":"6.51E-10"},{"v":1.84e-08,"d":"1.84E-08"},"Pyridine nucleotide-disulfide oxidoreductase family protein. Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate."]
["AT3G53890","EVR1",1457.6,0.80088,0.10255,7.8095,{"v":5.74e-15,"d":"5.74E-15"},1.66E-13,"Ribosomal protein S21e.","AT1G78290","SNRK2-8",224.72,1.6601,0.23403,7.0932,{"v":1.31e-12,"d":"1.31E-12"},{"v":3.76e-11,"d":"3.76E-11"},"full_name=SNF1-RELATED PROTEIN KINASE 2-8. Protein kinase superfamily protein. encodes a member of SNF1-related protein kinase (SnRK2) family whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress and dehydration.","AT3G51730",null,464.6,1.1096,0.17965,6.1765,{"v":6.55e-10,"d":"6.55E-10"},{"v":1.84e-08,"d":"1.84E-08"},"saposin B domain-containing protein."]
["AT4G37410","CYP81F4",623.28,2.1188,0.27139,7.8072,5.85E-15,{"v":1.68e-13,"d":"1.68E-13"},"full_name=cytochrome P450, family 81, subfamily F, polypeptide 4. cytochrome P450, family 81, subfamily F, polypeptide 4. member of CYP81F","AT4G00820","iqd17",445.28,1.2043,0.16989,7.0888,{"v":1.35e-12,"d":"1.35E-12"},{"v":3.88e-11,"d":"3.88E-11"},"full_name=IQ-domain 17. IQ-domain 17.","AT5G62570","CBP60A",202.35,1.5082,0.24425,6.1748,{"v":6.62e-10,"d":"6.62E-10"},{"v":1.86e-08,"d":"1.86E-08"},"Calmodulin binding protein-like protein."]
["AT1G80180","MASS1",268.37,-1.8139,0.23282,-7.7911,{"v":6.64e-15,"d":"6.64E-15"},{"v":1.91e-13,"d":"1.91E-13"},"hypothetical protein. Encodes a substrate of the MAPK kinases. Phenotypic analyses of Arabidopsis expressing phosphorylation site mutant forms of At1g80180.1 showed clustered stomata and higher stomatal index in cotyledons expressing the phosphomimetic form of At1g80180.1.","AT2G36780",null,62.682,-3.997,0.56415,-7.0849,{"v":1.39e-12,"d":"1.39E-12"},{"v":3.98e-11,"d":"3.98E-11"},"UDP-Glycosyltransferase superfamily protein.","AT5G61240",null,249.7,-1.3831,0.22405,-6.173,{"v":6.7e-10,"d":"6.70E-10"},{"v":1.88E-8,"d":"1.88E-08"},"Leucine-rich repeat (LRR) family protein."]
["AT3G58790","GAUT15",214.58,-1.8255,0.23435,-7.7895,{"v":6.73e-15,"d":"6.73E-15"},{"v":1.93e-13,"d":"1.93E-13"},"full_name=galacturonosyltransferase 15. galacturonosyltransferase 15. Encodes a protein with putative galacturonosyltransferase activity.","AT5G47720","AACT1",731.76,-1.0527,0.14864,-7.0824,1.42E-12,{"v":4.05e-11,"d":"4.05E-11"},"full_name=acetoacetyl-CoA thiolase 1. Thiolase family protein. Encodes a functional acetoacetyl-CoA thiolase that is functionally redundant with AACT2. Loss-of-function mutants show no apparent growth phenotypes.","AT3G54500","LNK2",301.07,1.4912,0.24158,6.1729,{"v":6.7e-10,"d":"6.70E-10"},{"v":1.88E-8,"d":"1.88E-08"},"agglutinin-like protein."]
["AT5G67060","HEC1",95.479,3.2639,0.41958,7.7788,{"v":7.32e-15,"d":"7.32E-15"},{"v":2.1e-13,"d":"2.10E-13"},"full_name=HECATE 1. basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT3G54340","AP3",66.884,-5.3126,0.75099,-7.0742,{"v":1.5e-12,"d":"1.50E-12"},{"v":4.29e-11,"d":"4.29E-11"},"full_name=APETALA 3. K-box region and MADS-box transcription factor family protein. Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies petal and stamen identities. Associates with PISTILLATA.","AT3G62700","ABCC14",1525.9,0.92305,0.14966,6.1676,{"v":6.94e-10,"d":"6.94E-10"},{"v":1.94e-08,"d":"1.94E-08"},"full_name=ATP-binding cassette C14. multidrug resistance-associated protein 10. member of MRP subfamily"]
["AT4G18100",null,9320.3,0.5788,0.074428,7.7766,{"v":7.45e-15,"d":"7.45E-15"},2.13E-13,"Ribosomal protein L32e.","AT2G44500",null,192.48,2.005,0.28357,7.0705,{"v":1.54e-12,"d":"1.54E-12"},{"v":4.4e-11,"d":"4.40E-11"},"O-fucosyltransferase family protein.","AT2G34020",null,174.42,-1.8498,0.3001,-6.1639,{"v":7.1e-10,"d":"7.10E-10"},{"v":1.98e-08,"d":"1.98E-08"},"Calcium-binding EF-hand family protein."]
["AT1G56340","CRT1a",1972.4,-0.78721,0.10125,-7.7753,{"v":7.53e-15,"d":"7.53E-15"},{"v":2.15e-13,"d":"2.15E-13"},"full_name=calreticulin 1a. calreticulin 1a. Encodes one of three Arabidopsis calreticulins. In CRT-deficient mouse fibroblasts, this protein restores ER Ca2+ levels.","AT5G51440","HSP23.5",68.618,-5.3529,0.75718,-7.0695,{"v":1.55e-12,"d":"1.55E-12"},{"v":4.43e-11,"d":"4.43E-11"},"HSP20-like chaperones superfamily protein.","AT4G01280","RVE5",331.15,1.3124,0.21297,6.1626,{"v":7.16e-10,"d":"7.16E-10"},{"v":2E-8,"d":"2.00E-08"},"Homeodomain-like superfamily protein."]
["AT3G02580","STE1",782.4,-0.97809,0.12583,-7.7733,{"v":7.65e-15,"d":"7.65E-15"},{"v":2.18e-13,"d":"2.18E-13"},"full_name=sterol 1. sterol 1. Brassinosteroid biosynthetic enzyme, catalyzes delta7 sterol C-5 desaturation step. Mutant has dwarf phenotype.","AT4G26740","ATS1",94.366,-3.4245,0.48453,-7.0677,{"v":1.58e-12,"d":"1.58E-12"},{"v":4.48e-11,"d":"4.48E-11"},"full_name=seed gene 1. peroxygenase 1. Encodes caleosin, a 27-kDa protein found within seed lipid bodies. Gene is expressed preferentially in the embryo, has similarity to a rice ABA-responsive gene, EFA27. Catalyze hydroperoxide-dependent mono-oxygenation reactions. Require calcium for peroxygenase activity. Probably deeply buried in lipid droplets or microsomes.","AT5G24150","SQP1",152.18,1.8743,0.30436,6.1582,{"v":7.36e-10,"d":"7.36E-10"},{"v":2.05e-08,"d":"2.05E-08"},"FAD/NAD(P)-binding oxidoreductase family protein. squalene monooxygenase gene homolog"]
["AT1G03600","PSB27",2735.9,-0.69813,0.089889,-7.7665,{"v":8.07e-15,"d":"8.07E-15"},{"v":2.3e-13,"d":"2.30E-13"},"photosystem II family protein.","AT1G53910","RAP2.12",968.53,-0.89847,0.12713,-7.0675,{"v":1.58e-12,"d":"1.58E-12"},{"v":4.48e-11,"d":"4.48E-11"},"full_name=related to AP2 12. related to AP2 12. Encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. Involved in oxygen sensing.","AT1G64900","CYP89A2",202.29,1.5566,0.25283,6.1568,{"v":7.42e-10,"d":"7.42E-10"},{"v":2.06e-08,"d":"2.06E-08"},"full_name=cytochrome P450, family 89, subfamily A, polypeptide 2. cytochrome P450, family 89, subfamily A, polypeptide 2. Encodes cytochrome P450 (CYP89A2)."]
["AT1G70310","SPDS2",2233.5,0.74302,0.095688,7.765,{"v":8.16e-15,"d":"8.16E-15"},{"v":2.32e-13,"d":"2.32E-13"},"full_name=spermidine synthase 2. spermidine synthase 2. Spermidine synthase.","AT1G29280","WRKY65",144.7,2.2601,0.31995,7.064,1.62E-12,4.58E-11,"full_name=WRKY DNA-binding protein 65. WRKY DNA-binding protein 65. member of WRKY Transcription Factor; Group II-e","AT5G64580","EMB3144",451.41,-1.1264,0.18305,-6.1534,{"v":7.58e-10,"d":"7.58E-10"},{"v":2.11E-8,"d":"2.11E-08"},"full_name=EMBRYO DEFECTIVE 3144. AAA-type ATPase family protein."]
["AT1G11330","RDA2",173.86,-2.0577,0.26554,-7.7494,{"v":9.23e-15,"d":"9.23E-15"},{"v":2.62e-13,"d":"2.62E-13"},"S-locus lectin protein kinase family protein.","AT2G43590",null,83.414,-6.3742,0.90277,-7.0608,1.66E-12,{"v":4.68e-11,"d":"4.68E-11"},"Chitinase family protein.","AT5G06980","LNK4",126.46,1.9385,0.31505,6.153,{"v":7.6e-10,"d":"7.60E-10"},{"v":2.11E-8,"d":"2.11E-08"},"hypothetical protein."]
["AT2G11910",null,1311.2,0.82331,0.10638,7.7392,{"v":1E-14,"d":"1.00E-14"},2.84E-13,"hypothetical protein.","AT4G36850",null,405.35,-1.2507,0.17715,-7.0598,1.67E-12,{"v":4.71e-11,"d":"4.71E-11"},"PQ-loop repeat family protein / transmembrane family protein.","AT2G34640","PTAC12",704.96,-1.1975,0.19464,-6.1524,{"v":7.63e-10,"d":"7.63E-10"},{"v":2.11E-8,"d":"2.11E-08"},"full_name=plastid transcriptionally active 12. plastid transcriptionally active 12. Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression."]
["AT1G09960","SUT4",934.33,-1.0937,0.14134,-7.7383,{"v":1.01e-14,"d":"1.01E-14"},2.85E-13,"full_name=sucrose transporter 4. sucrose transporter 4. low affinity (10mM) sucrose transporter in sieve elements (phloem)","AT1G20190","EXPA11",47.859,4.0505,0.57633,7.0282,{"v":2.09e-12,"d":"2.09E-12"},{"v":5.9e-11,"d":"5.90E-11"},"full_name=expansin 11. expansin 11. member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)","AT1G66500",null,91.683,2.5063,0.40748,6.1508,{"v":7.71e-10,"d":"7.71E-10"},{"v":2.13e-08,"d":"2.13E-08"},"Pre-mRNA cleavage complex II."]
["AT5G17700",null,1631.8,-0.97925,0.12664,-7.7323,1.06E-14,{"v":2.99e-13,"d":"2.99E-13"},"MATE efflux family protein.","AT4G32410","CESA1",2717.2,0.77379,0.11018,7.0231,{"v":2.17e-12,"d":"2.17E-12"},{"v":6.11e-11,"d":"6.11E-11"},"full_name=cellulose synthase 1. cellulose synthase 1. Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.","AT5G08560","WDR26",766.06,0.95394,0.15512,6.1499,{"v":7.75e-10,"d":"7.75E-10"},{"v":2.14E-8,"d":"2.14E-08"},"transducin family protein / WD-40 repeat family protein."]
["AT5G04200","MC9",270.7,-1.5756,0.20387,-7.7286,1.09E-14,3.07E-13,"full_name=metacaspase 9. metacaspase 9. Encodes a putative metacaspase. Arabidopsis contains three type I MCP genes (MCP1a-c) and six type II MCP genes (MCP2a%E2%80%93f): AtMCP1a/At5g64240, AtMCP1b/At1g02170, AtMCP1c/At4g25110, AtMCP2a/At1g79310, AtMCP2b/At1g79330, AtMCP2c/At1g79320, AtMCP2d/At1g79340, AtMCP2e/At1g16420, AtMCP2f/At5g04200.","AT2G46800","ZAT",1552.1,-0.78119,0.11132,-7.0175,{"v":2.26e-12,"d":"2.26E-12"},6.35E-11,"full_name=zinc transporter of Arabidopsis thaliana. zinc transporter. Encodes a member of the zinc transporter (ZAT) and cation diffusion facilitator (CDF) families. It is expressed throughout the plant, especially in dividing, differentiating and expanding cells. The protein is localized to the vacuolar membrane. Mediates Zn ion homeostasis.","AT2G22080",null,549.72,1.089,0.17711,6.1488,{"v":7.81e-10,"d":"7.81E-10"},{"v":2.15e-08,"d":"2.15E-08"},"transmembrane protein."]
["AT5G06460","UBA 2",1538.3,-0.84795,0.10973,-7.728,1.09E-14,3.08E-13,"full_name=ubiquitin activating enzyme 2. ubiquitin activating enzyme 2. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined.","AT2G17230","EXL5",1013,-1.0584,0.15091,-7.0135,{"v":2.32e-12,"d":"2.32E-12"},{"v":6.52e-11,"d":"6.52E-11"},"full_name=EXORDIUM like 5. EXORDIUM like 5.","AT2G31820",null,276.18,1.3502,0.21976,6.1439,{"v":8.05e-10,"d":"8.05E-10"},{"v":2.22E-8,"d":"2.22E-08"},"Ankyrin repeat family protein."]
["AT1G47400","FEP3",426.32,-1.4259,0.18463,-7.7231,{"v":1.14e-14,"d":"1.14E-14"},3.19E-13,"hypothetical protein.","AT4G19020","CMT2",230.64,1.4763,0.21057,7.0108,{"v":2.37e-12,"d":"2.37E-12"},{"v":6.64e-11,"d":"6.64E-11"},"full_name=chromomethylase 2. chromomethylase 2. Encodes a plant DNA methyltransferase that methylates mainly cytosines in CHH (H = any base but G) contexts. It is involved in heat tolerance.","AT1G28290","AGP31",1327.6,-0.85641,0.13949,-6.1397,{"v":8.27e-10,"d":"8.27E-10"},{"v":2.27e-08,"d":"2.27E-08"},"full_name=arabinogalactan protein 31. arabinogalactan protein 31. Encodes an atypical arabinogalactan protein that is localized to the plasma membrange. AGP31 is highly expressed in flowers and vascular tissue and is repressed by jasmonic acid. AGP31 may play a role in vascular tissue function during defense and development."]
["AT1G07040",null,914.89,-0.92664,0.12,-7.7223,{"v":1.14e-14,"d":"1.14E-14"},3.21E-13,"plant/protein.","AT2G40840","DPE2",5876.1,-0.73582,0.10497,-7.0097,{"v":2.39e-12,"d":"2.39E-12"},{"v":6.69e-11,"d":"6.69E-11"},"full_name=disproportionating enzyme 2. disproportionating enzyme 2. Encodes a cytosolic protein with transglucosidase and amylomaltase activity. It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins. On the other hand, arabinose and fructose were not efficiently used. Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of &#946;-maltose.","AT4G31320","SAUR37",124.48,-1.9736,0.32155,-6.1376,8.38E-10,{"v":2.3e-08,"d":"2.30E-08"},"SAUR-like auxin-responsive protein family."]
["AT4G12700",null,515.72,-1.2864,0.16664,-7.7196,1.17E-14,{"v":3.28e-13,"d":"3.28E-13"},"calcium ion-binding protein.","AT1G47980",null,72.16,-3.5219,0.50267,-7.0065,{"v":2.44e-12,"d":"2.44E-12"},{"v":6.83e-11,"d":"6.83E-11"},"desiccation-like protein.","AT2G10940",null,316.49,-1.3136,0.21405,-6.1369,{"v":8.41e-10,"d":"8.41E-10"},{"v":2.31e-08,"d":"2.31E-08"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein."]
["AT1G04270","RPS15",7942.6,0.58482,0.075776,7.7178,{"v":1.18e-14,"d":"1.18E-14"},3.32E-13,"full_name=cytosolic ribosomal protein S15. cytosolic ribosomal protein S15. Encodes cytosolic ribosomal protein S15.","AT5G07190","ATS3",783.11,-5.2265,0.74621,-7.0041,{"v":2.49e-12,"d":"2.49E-12"},{"v":6.94e-11,"d":"6.94E-11"},"full_name=seed gene 3. embryo-specific protein 3. Gene is expressed preferentially in the embryo and encodes a unique protein of unknown function.","AT3G01100","HYP1",416.07,1.5024,0.24489,6.1349,{"v":8.52e-10,"d":"8.52E-10"},{"v":2.33E-8,"d":"2.33E-08"},"full_name=hypothetical protein 1. hypothetical protein 1. unknown protein, has cDNAs and ESTs associated to it"]
["AT2G42600","PPC2",2008.1,-0.89282,0.11571,-7.716,{"v":1.2e-14,"d":"1.20E-14"},{"v":3.36e-13,"d":"3.36E-13"},"full_name=phosphoenolpyruvate carboxylase 2. phosphoenolpyruvate carboxylase 2. Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.","AT4G29690",null,341.97,1.283,0.18355,6.9901,{"v":2.75e-12,"d":"2.75E-12"},{"v":7.66e-11,"d":"7.66E-11"},"Alkaline-phosphatase-like family protein.","AT1G66390","MYB90",258.15,-1.4822,0.24169,-6.1328,{"v":8.63e-10,"d":"8.63E-10"},{"v":2.36E-8,"d":"2.36E-08"},"full_name=myb domain protein 90. myb domain protein 90. production of anthocyanin pigment 2 protein (PAP2)"]
["AT1G32470",null,380.76,1.3769,0.17854,7.7119,1.24E-14,{"v":3.46e-13,"d":"3.46E-13"},"Single hybrid motif superfamily protein.","AT2G30870","GSTF10",1145,1.0823,0.15492,6.9861,{"v":2.83e-12,"d":"2.83E-12"},{"v":7.86e-11,"d":"7.86E-11"},"full_name=glutathione S-transferase PHI 10. glutathione S-transferase PHI 10. early dehydration-induced gene ERD13 homologous to tobacco and maize glutathione S-transferases. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002)","AT1G01430","TBL25",97.653,-2.0893,0.34081,-6.1303,{"v":8.77e-10,"d":"8.77E-10"},{"v":2.39e-08,"d":"2.39E-08"},"full_name=TRICHOME BIREFRINGENCE-LIKE 25. TRICHOME BIREFRINGENCE-LIKE 25. Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication)."]
["AT1G29070","PRPL34",1108.7,0.91622,0.11883,7.7105,1.25E-14,{"v":3.5e-13,"d":"3.50E-13"},"Ribosomal protein L34.","AT5G20630","GER3",89.837,10.365,1.484,6.9849,{"v":2.85e-12,"d":"2.85E-12"},{"v":7.92e-11,"d":"7.92E-11"},"full_name=germin 3. germin 3. Encodes a germin-like protein. Its transcripts are more abundant in RNA from leaves collected in the evening, suggesting some kind of circadian regulation.","AT3G53280","CYP71B5",181.01,1.5747,0.25705,6.126,{"v":9.01e-10,"d":"9.01E-10"},{"v":2.45e-08,"d":"2.45E-08"},"full_name=cytochrome p450 71b5. cytochrome p450 71b5. cytochrome P450 monooxygenase"]
["AT2G17500","PILS5",62.867,4.5481,0.59005,7.7079,1.28E-14,3.56E-13,"Auxin efflux carrier family protein.","AT2G45290","TKL2",1051.5,-0.96522,0.13829,-6.9796,{"v":2.96e-12,"d":"2.96E-12"},{"v":8.22e-11,"d":"8.22E-11"},"Transketolase.","AT2G15090","KCS8",316.7,-1.3288,0.21699,-6.1238,{"v":9.13e-10,"d":"9.13E-10"},{"v":2.48E-8,"d":"2.48E-08"},"full_name=3-ketoacyl-CoA synthase 8. 3-ketoacyl-CoA synthase 8. Encodes KCS8, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids)."]
["AT1G08570","ACHT4",1227.2,-1.1824,0.15344,-7.7058,{"v":1.3E-14,"d":"1.30E-14"},{"v":3.62e-13,"d":"3.62E-13"},"full_name=atypical CYS HIS rich thioredoxin 4. atypical CYS HIS rich thioredoxin 4. Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.","AT4G34160","CYCD3;1",112.88,2.0613,0.2956,6.9733,{"v":3.1e-12,"d":"3.10E-12"},{"v":8.58e-11,"d":"8.58E-11"},"full_name=CYCLIN D3;1. CYCLIN D3;1. encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1.","AT5G54970",null,85.257,-2.2793,0.37256,-6.1181,{"v":9.47e-10,"d":"9.47E-10"},{"v":2.57e-08,"d":"2.57E-08"},"hypothetical protein."]
["AT2G02780",null,1015.3,-0.94157,0.12227,-7.7008,{"v":1.35e-14,"d":"1.35E-14"},{"v":3.76e-13,"d":"3.76E-13"},"Leucine-rich repeat protein kinase family protein.","AT3G24650","ABI3",1624.1,-0.94916,0.13617,-6.9703,{"v":3.16e-12,"d":"3.16E-12"},{"v":8.75e-11,"d":"8.75E-11"},"full_name=ABA INSENSITIVE 3. AP2/B3-like transcriptional factor family protein. Homologous to the maize transcription factor Viviparous-1. Full length ABI3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of ABI3 requires the B3 DNA-binding domain and an activation domain. In addition to the known N-terminal-located activation domain, a second transcription activation domain was found in the B1 region of ABI3. ABI3 is essential for seed maturation. Regulator of the transition between embryo maturation and early seedling development. Putative seed-specific transcriptional activator. ABI3 is a central regulator in ABA signaling and is unstable in vivo. It interacts with and can by polyubiquitinated by AIP2 in vivo. Based on double mutant analyses, ABI3 interacts genetically with both FUS3 and LEC1 and is involved in controlling accumulation of chlorophyll and anthocyanins, sensitivity to abscisic acid, and expression of the members of the 12S storage protein gene family. In addition, both FUS3 and LEC1 regulate positively the abundance of the ABI3 protein in the seed. Alternative splicing of ABI3 is developmentally regulated by SUA (AT3G54230).","AT3G30775","ERD5",209.96,1.672,0.27339,6.1158,{"v":9.61e-10,"d":"9.61E-10"},{"v":2.61e-08,"d":"2.61E-08"},"full_name=EARLY RESPONSIVE TO DEHYDRATION 5. Methylenetetrahydrofolate reductase family protein. Encodes a proline oxidase that is predicted to localize to the inner mitochondrial membrane, its mRNA expression induced by high levels of Al and by osmotic stress. The promoter contains an L-proline-inducible element."]
["AT1G43640","TLP5",149.35,-2.0556,0.26696,-7.6999,1.36E-14,3.78E-13,"full_name=tubby like protein 5. tubby like protein 5. Member of TLP family","AT3G63140","CSP41A",310.62,1.2932,0.18555,6.9693,{"v":3.19e-12,"d":"3.19E-12"},{"v":8.8e-11,"d":"8.80E-11"},"full_name=chloroplast stem-loop binding protein of 41 kDa. chloroplast stem-loop binding protein of 41 kDa. Encodes a protein with ribonuclease activity that is involved in plastid rRNA maturation.","AT4G12040","SAP7",594.07,1.2566,0.2055,6.1147,{"v":9.67e-10,"d":"9.67E-10"},{"v":2.61e-08,"d":"2.61E-08"},"full_name=stress-associated protein 7. A20/AN1-like zinc finger family protein."]
["AT1G11080","scpl31",251.32,-2.5127,0.32641,-7.6979,1.38E-14,{"v":3.83e-13,"d":"3.83E-13"},"full_name=serine carboxypeptidase-like 31. serine carboxypeptidase-like 31.","AT3G10660","CPK2",112.31,2.0987,0.30115,6.9691,{"v":3.19e-12,"d":"3.19E-12"},{"v":8.8e-11,"d":"8.80E-11"},"full_name=calmodulin-domain protein kinase cdpk isoform 2. calmodulin-domain protein kinase cdpk isoform 2. predicted to encode calcium-dependent protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal, to A prevented the meristoylation . The G to A mutation decreased AtCPK2 membrane association by approximately 50%.","AT1G06110","SKIP16",747.52,1.01,0.16517,6.1145,{"v":9.69e-10,"d":"9.69E-10"},{"v":2.61e-08,"d":"2.61E-08"},"full_name=SKP1/ASK-interacting protein 16. SKP1/ASK-interacting protein 16."]
["AT4G26420","GAMT1",190.46,-2.0122,0.26142,-7.6971,{"v":1.39e-14,"d":"1.39E-14"},{"v":3.85e-13,"d":"3.85E-13"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. A member of the Arabidopsis SABATH methyltransferase gene family. Encodes GAMT1, a methyltransferase that uses S-adenosine-L-methionine (SAM) as a methyl donor to methylate the carboxyl group of GAs, resulting in the methyl esters of GAs (MeGAs). Expressed most highly in the siliques during seed development.","AT1G06400","ARA-2",775.77,-1.0125,0.14529,-6.9687,{"v":3.2e-12,"d":"3.20E-12"},{"v":8.81e-11,"d":"8.81E-11"},"Ras-related small GTP-binding family protein. small GTP-binding protein (ara-2)","AT4G22214",null,109.02,-2.0248,0.33115,-6.1145,{"v":9.69e-10,"d":"9.69E-10"},{"v":2.61e-08,"d":"2.61E-08"},"Defensin-like (DEFL) family protein. Encodes a defensin-like (DEFL) family protein."]
["AT5G27410",null,588.92,1.0972,0.14258,7.6953,1.41E-14,{"v":3.9E-13,"d":"3.90E-13"},"D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein. D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). Note that the At5g27410.2 gene model (TAIR10) has been obsoleted due to the lack of experimental support.","AT4G25080","CHLM",867.25,0.8899,0.1278,6.9631,{"v":3.33e-12,"d":"3.33E-12"},{"v":9.16e-11,"d":"9.16E-11"},"full_name=magnesium-protoporphyrin IX methyltransferase. magnesium-protoporphyrin IX methyltransferase. Encodes a protein with methyltransferase activity responsible for the methylation of magnesium protoporphyrin IX. Mutants defective in this gene are affected in chlorophyll biosynthesis and show a reduction in the accumulation of a number of major thylakoid-associated proteins including components of PSI (LHCI), PSII (LHCII, D1, CP43) and the cytochrome b6f complex (Cytf). By contrast, no significant changes were detected for the proteins of the stroma and the chloroplast envelope.","AT5G10960","CAF1I",1428.5,0.86746,0.1419,6.113,{"v":9.78e-10,"d":"9.78E-10"},{"v":2.64e-08,"d":"2.64E-08"},"Polynucleotidyl transferase, ribonuclease H-like superfamily protein."]
["AT2G40080","ELF4",383.28,1.3125,0.17062,7.6925,1.44E-14,{"v":3.98e-13,"d":"3.98E-13"},"full_name=EARLY FLOWERING 4. EARLY FLOWERING-like protein (DUF1313). Encodes a novel nuclear 111 amino-acid phytochrome-regulated component of a negative feedback loop involving the circadian clock central oscillator components CCA1 and LHY. ELF4 is necessary for light-induced expression of both CCA1 and LHY, and conversely, CCA1 and LHY act negatively on light-induced ELF4 expression. ELF4 promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. It is involved in the phyB-mediated constant red light induced seedling de-etiolation process and may function to coregulate the expression of a subset of phyB-regulated genes.","AT1G54860",null,92.283,-3.328,0.4782,-6.9594,3.42E-12,{"v":9.39e-11,"d":"9.39E-11"},"Glycoprotein membrane precursor GPI-anchored.","AT4G17140",null,1155.9,0.9664,0.15818,6.1096,{"v":9.99e-10,"d":"9.99E-10"},{"v":2.69e-08,"d":"2.69E-08"},"pleckstrin homology (PH) domain-containing protein."]
["AT1G49520",null,236.88,-1.6161,0.21034,-7.6833,1.55E-14,4.27E-13,"SWIB complex BAF60b domain-containing protein.","AT1G63770",null,6900.9,-0.66177,0.095327,-6.9421,{"v":3.86e-12,"d":"3.86E-12"},1.06E-10,"Peptidase M1 family protein.","AT4G32460","BDX",1526.7,-1.3087,0.21422,-6.1091,{"v":1e-09,"d":"1.00E-09"},{"v":2.69e-08,"d":"2.69E-08"},"choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642)."]
["AT1G64140",null,3836.8,-0.98179,0.12789,-7.6771,{"v":1.63e-14,"d":"1.63E-14"},{"v":4.48e-13,"d":"4.48E-13"},"WRKY transcription factor.","AT3G28860","ABCB19",1137.2,0.82477,0.11884,6.9402,{"v":3.92e-12,"d":"3.92E-12"},{"v":1.07e-10,"d":"1.07E-10"},"full_name=ATP-binding cassette B19. ATP binding cassette subfamily B19. Encodes a member of the ATP-binding cassette (ABC) transporter family that is involved in auxin transport and is involved in postembryonic organ separation. Also known as AtMDR11 and PGP19. Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Acts upstream of phyA in regulating hypocotyl elongation and gravitropic response. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AtPGP1.","AT2G21490","LEA",97.282,2.6986,0.4421,6.1041,{"v":1.03E-9,"d":"1.03E-09"},{"v":2.77E-8,"d":"2.77E-08"},"full_name=dehydrin LEA. dehydrin LEA."]
["AT4G00100","RPS13A",4125,0.68718,0.089525,7.6758,{"v":1.64e-14,"d":"1.64E-14"},4.51E-13,"full_name=ribosomal protein S13A. ribosomal protein S13A. Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development","AT1G02816",null,279.41,-1.5478,0.22325,-6.9331,{"v":4.12e-12,"d":"4.12E-12"},1.13E-10,"pectinesterase (Protein of unknown function, DUF538).","AT1G49660","CXE5",279.98,1.5453,0.25321,6.103,{"v":1.04e-09,"d":"1.04E-09"},{"v":2.79e-08,"d":"2.79E-08"},"full_name=carboxyesterase 5. carboxyesterase 5. Encodes a protein with carboxylesterase whose activity was tested using pNA."]
["AT3G18780","ACT2",1316.6,0.95376,0.12426,7.6755,{"v":1.65e-14,"d":"1.65E-14"},{"v":4.52e-13,"d":"4.52E-13"},"full_name=actin 2. actin 2. Encodes an actin that is constitutively expressed in vegetative structures but not pollen. ACT2 is involved in tip growth of root hairs.","AT1G33800","GXMT1",145.92,1.9245,0.27758,6.9329,{"v":4.12e-12,"d":"4.12E-12"},1.13E-10,"full_name=glucuronoxylan methyltransferase 1. glucuronoxylan 4-O-methyltransferase-like protein (DUF579). Encodes a glucuronoxylan(GX)-speci&#64257;c 4-O-methyltransferase responsible for methylating GlcA residues in GX. Reduced methylation of GX ingxmt1-1 plants is correlated with altered lignin composition.","AT5G04530","KCS19",183.94,-1.681,0.27553,-6.1011,{"v":1.05e-09,"d":"1.05E-09"},{"v":2.82e-08,"d":"2.82E-08"},"full_name=3-ketoacyl-CoA synthase 19. 3-ketoacyl-CoA synthase 19. Encodes KCS19, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids)."]
["AT5G64260","EXL2",2182.5,-1.3416,0.17485,-7.6729,{"v":1.68e-14,"d":"1.68E-14"},{"v":4.6e-13,"d":"4.60E-13"},"full_name=EXORDIUM like 2. EXORDIUM like 2.","AT3G60070",null,306,1.7428,0.2515,6.9298,{"v":4.22e-12,"d":"4.22E-12"},1.15E-10,"Major facilitator superfamily protein.","AT4G25630","FIB2",735.89,-0.94615,0.15515,-6.0984,{"v":1.07E-9,"d":"1.07E-09"},{"v":2.86e-08,"d":"2.86E-08"},"full_name=fibrillarin 2. fibrillarin 2. encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.2f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated."]
["AT5G17050","UGT78D2",673.15,1.2205,0.15908,7.6724,{"v":1.69e-14,"d":"1.69E-14"},{"v":4.61e-13,"d":"4.61E-13"},"full_name=UDP-glucosyl transferase 78D2. UDP-glucosyl transferase 78D2. The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates.","AT4G17100",null,519.56,1.403,0.20265,6.9233,4.41E-12,{"v":1.2E-10,"d":"1.20E-10"},"poly(U)-specific endoribonuclease-B protein.","AT3G14840","LIK1",271.9,-1.3465,0.22112,-6.0896,{"v":1.13E-9,"d":"1.13E-09"},{"v":3.02e-08,"d":"3.02E-08"},"Leucine-rich repeat transmembrane protein kinase. Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception."]
["AT4G18670","LRX5",1169.1,-0.86184,0.11235,-7.6709,{"v":1.71e-14,"d":"1.71E-14"},{"v":4.66e-13,"d":"4.66E-13"},"Leucine-rich repeat (LRR) family protein.","AT4G16660","HSP70",1042,0.93651,0.13538,6.9174,{"v":4.6e-12,"d":"4.60E-12"},{"v":1.25e-10,"d":"1.25E-10"},"heat shock protein 70 (Hsp 70) family protein.","AT2G32400","GLR5",72.12,-2.4628,0.40443,-6.0896,{"v":1.13E-9,"d":"1.13E-09"},{"v":3.02e-08,"d":"3.02E-08"},"full_name=glutamate receptor 5. glutamate receptor 5. Glr5"]
["AT5G49690",null,80.412,3.4592,0.45109,7.6685,1.74E-14,4.74E-13,"UDP-Glycosyltransferase superfamily protein.","AT1G59700","GSTU16",171.34,-1.8491,0.26741,-6.9148,{"v":4.69e-12,"d":"4.69E-12"},1.27E-10,"full_name=glutathione S-transferase TAU 16. glutathione S-transferase TAU 16. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","AT5G04380",null,49.274,4.0267,0.66155,6.0869,{"v":1.15E-9,"d":"1.15E-09"},{"v":3.06e-08,"d":"3.06E-08"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein."]
["AT1G70090","LGT8",548.67,-1.109,0.14468,-7.6653,{"v":1.78e-14,"d":"1.78E-14"},{"v":4.86e-13,"d":"4.86E-13"},"full_name=glucosyl transferase family 8. glucosyl transferase family 8. Encodes a protein with putative galacturonosyltransferase activity.","AT3G15510","NAC2",69.752,-3.172,0.459,-6.9106,{"v":4.83e-12,"d":"4.83E-12"},{"v":1.31e-10,"d":"1.31E-10"},"full_name=NAC domain containing protein 2. NAC domain containing protein 2. Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2.","AT1G74100","SOT16",295.82,-1.4427,0.2371,-6.0848,{"v":1.17e-09,"d":"1.17E-09"},{"v":3.1E-8,"d":"3.10E-08"},"full_name=sulfotransferase 16. sulfotransferase 16. encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with different desulfoglucosinolates, the best substrate is indole-3-methyl-dsGS, followed by benzyl-dsGS. Expression was induced by wounding, jasmonate and ethylene stimulates."]
["AT1G48300","DGAT3",4866.9,-0.89022,0.11619,-7.6621,{"v":1.83e-14,"d":"1.83E-14"},4.97E-13,"full_name=diacylglycerol acyltransferase 3. diacylglycerol acyltransferase.","AT1G74500","BS1",60.634,3.0421,0.44044,6.9069,{"v":4.95e-12,"d":"4.95E-12"},1.34E-10,"full_name=activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1. activation-tagged BRI1(brassinosteroid-insensitive 1)-suppressor 1. Encodes a basic helix%E2%80%93loop%E2%80%93helix transcription factor that acts downstream of MP in root initiation. TMO7 protein moves to the hypophysis and to vascular cells, contributing to MP-dependent root formation. Promotes the correct definition of the hypophysis cell division plane.","AT4G28240","WIP1",201.03,-1.5073,0.24812,-6.0747,{"v":1.24e-09,"d":"1.24E-09"},{"v":3.3e-08,"d":"3.30E-08"},"Wound-responsive family protein."]
["AT5G03940","CPSRP54",1655.6,0.82657,0.10791,7.6601,{"v":1.86e-14,"d":"1.86E-14"},{"v":5.04e-13,"d":"5.04E-13"},"full_name=chloroplast signal recognition particle 54 kDa subunit. chloroplast signal recognition particle 54 kDa subunit. mutant has Yellow first leaves; Chloroplast Signal Recognition Particle Subunit","AT3G58120","BZIP61",77.624,2.5135,0.36439,6.8978,{"v":5.28e-12,"d":"5.28E-12"},1.43E-10,"Basic-leucine zipper (bZIP) transcription factor family protein. Encodes a member of the BZIP family of transcription factors. Forms heterodimers with the related protein AtbZIP34. Binds to G-boxes in vitro and is localized to the nucleus in onion epidermal cells.","AT1G23020","FRO3",369.95,-1.2255,0.20181,-6.0724,{"v":1.26E-9,"d":"1.26E-09"},{"v":3.34e-08,"d":"3.34E-08"},"full_name=ferric reduction oxidase 3. ferric reduction oxidase 3. Encodes a ferric chelate reductase whose transcription is regulated by FIT1. Expressed in the root, shoot, flower and cotyledon."]
["AT5G49910","cpHsc70-2",1693.1,0.98888,0.12923,7.6521,{"v":1.98e-14,"d":"1.98E-14"},{"v":5.36e-13,"d":"5.36E-13"},"full_name=chloroplast heat shock protein 70-2. chloroplast heat shock protein 70-2. Stromal heat shock protein involved in protein import into chloroplast.","AT3G05190",null,1635,-0.8169,0.11848,-6.8947,{"v":5.4e-12,"d":"5.40E-12"},{"v":1.46e-10,"d":"1.46E-10"},"D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein.","AT2G15960",null,408.42,1.3314,0.21933,6.0704,{"v":1.28e-09,"d":"1.28E-09"},{"v":3.38e-08,"d":"3.38E-08"},"stress-induced protein."]
["AT4G34200","EDA9",3365.6,0.67064,0.087653,7.6511,{"v":1.99e-14,"d":"1.99E-14"},{"v":5.39e-13,"d":"5.39E-13"},"full_name=embryo sac development arrest 9. D-3-phosphoglycerate dehydrogenase. Encodes a 3-phosphoglycerate dehydrogenase that is essential for embryo and pollen development.","AT1G72430","SAUR78",436.28,-1.9278,0.27965,-6.8935,{"v":5.44e-12,"d":"5.44E-12"},{"v":1.47e-10,"d":"1.47E-10"},"SAUR-like auxin-responsive protein family.","AT4G38600","KAK",1656.9,0.80775,0.13311,6.0681,{"v":1.29e-09,"d":"1.29E-09"},{"v":3.42e-08,"d":"3.42E-08"},"full_name=KAKTUS. HECT ubiquitin protein ligase family protein KAK. encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content."]
["AT3G04000",null,774.72,-0.96689,0.12645,-7.6462,2.07E-14,{"v":5.59e-13,"d":"5.59E-13"},"NAD(P)-binding Rossmann-fold superfamily protein. ChlADR is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on saturated and alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. The N-terminal region of this protein directs GFP to the chloroplast where where ChlADR likely helps to maintain the photosynthetic process by detoxifying reactive carbonyls formed during lipid peroxidation. In addition, this enzyme can also reduce cis-3-hexenal, a major plant volatile compound that contributes to green leaf odor, as well as methylglyoxal in vitro.","AT5G49360","BXL1",50.231,3.929,0.5703,6.8892,{"v":5.61e-12,"d":"5.61E-12"},1.51E-10,"full_name=beta-xylosidase 1. beta-xylosidase 1. Encodes a bifunctional {beta}-D-xylosidase/{alpha}-L-arabinofuranosidase required for pectic arabinan modification. Located in the extracellular matrix. Gene is expressed specifically in tissues undergoing secondary wall thickening. This is a member of glycosyl hydrolase family 3 and has six other closely related members.","AT2G42280","FBH4",150.01,-1.7325,0.28584,-6.0611,{"v":1.35e-09,"d":"1.35E-09"},{"v":3.56e-08,"d":"3.56E-08"},"full_name=FLOWERING BHLH 4. basic helix-loop-helix (bHLH) DNA-binding superfamily protein."]
["AT5G42890","SCP2",5583.3,0.71343,0.09333,7.6442,{"v":2.1e-14,"d":"2.10E-14"},{"v":5.67e-13,"d":"5.67E-13"},"full_name=sterol carrier protein 2. sterol carrier protein 2.","AT1G29980",null,1106.8,-0.939,0.13631,-6.8888,5.63E-12,1.51E-10,"choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642).","AT2G30860","GSTF9",2852.2,-0.75526,0.12461,-6.061,{"v":1.35e-09,"d":"1.35E-09"},{"v":3.56e-08,"d":"3.56E-08"},"full_name=glutathione S-transferase PHI 9. glutathione S-transferase PHI 9. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002)."]
["AT1G67740","PSBY",1376.3,-0.96211,0.12593,-7.6399,{"v":2.17e-14,"d":"2.17E-14"},{"v":5.86e-13,"d":"5.86E-13"},"full_name=photosystem II BY. photosystem II BY. PsbY precursor (psbY) mRNA. This single nuclear gene is imported into the chloroplasts where it is processed into two integral membrane proteins with identical topology (PsbY-1 and PsbY-2). The protein appears to bind manganese but its role is not well understood.","AT2G40520","NTP2",54.399,3.1548,0.45796,6.8888,5.63E-12,1.51E-10,"Nucleotidyltransferase family protein.","AT5G65380",null,1485.9,0.81807,0.13498,6.0606,{"v":1.36e-09,"d":"1.36E-09"},{"v":3.57e-08,"d":"3.57E-08"},"MATE efflux family protein."]
["AT3G61440","CYSC1",4667.3,-0.65779,0.086184,-7.6324,{"v":2.3E-14,"d":"2.30E-14"},{"v":6.2e-13,"d":"6.20E-13"},"full_name=cysteine synthase C1. cysteine synthase C1. Encodes a cysteine synthase isomer CysC1. The isomer is however less effective in cysteine biosynthesis. It is involved in beta-cyanoalanine biosynthesis, an intermediate of cyanide detoxification pathway.","AT4G02530","MPH2",668.59,0.95026,0.13795,6.8885,{"v":5.64e-12,"d":"5.64E-12"},1.51E-10,"chloroplast thylakoid lumen protein.","AT1G73620",null,108.06,-2.0519,0.33862,-6.0597,{"v":1.36e-09,"d":"1.36E-09"},{"v":3.58e-08,"d":"3.58E-08"},"Pathogenesis-related thaumatin superfamily protein."]
["AT1G48160",null,375.28,1.3214,0.17316,7.631,{"v":2.33e-14,"d":"2.33E-14"},{"v":6.26e-13,"d":"6.26E-13"},"signal recognition particle 19 kDa protein, putative / SRP19.","AT3G11170","FAD7",1326.5,0.95538,0.13878,6.8843,{"v":5.81e-12,"d":"5.81E-12"},{"v":1.55e-10,"d":"1.55E-10"},"full_name=fatty acid desaturase 7. fatty acid desaturase 7. Chloroplastic enzyme responsible for the synthesis of 16:3 and 18:3 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene expression is induced by wounding in shoot and root. The wound-response in shoot is independent of jasmonic acid mediated pathway whereas the root response is mediated by jasmonic acid.","AT3G04720","PR4",171.05,1.7283,0.28526,6.0588,{"v":1.37E-9,"d":"1.37E-09"},{"v":3.6e-08,"d":"3.60E-08"},"full_name=pathogenesis-related 4. pathogenesis-related 4. Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection."]
["AT5G36100",null,470.35,-1.3928,0.18256,-7.6293,{"v":2.36e-14,"d":"2.36E-14"},{"v":6.33e-13,"d":"6.33E-13"},"transmembrane protein.","AT3G30775","ERD5",320.17,-1.9182,0.27874,-6.8817,{"v":5.91e-12,"d":"5.91E-12"},1.58E-10,"full_name=EARLY RESPONSIVE TO DEHYDRATION 5. Methylenetetrahydrofolate reductase family protein. Encodes a proline oxidase that is predicted to localize to the inner mitochondrial membrane, its mRNA expression induced by high levels of Al and by osmotic stress. The promoter contains an L-proline-inducible element.","AT1G44350","ILL6",230.46,1.4326,0.23661,6.0547,{"v":1.41e-09,"d":"1.41E-09"},{"v":3.68e-08,"d":"3.68E-08"},"full_name=IAA-leucine resistant (ILR)-like gene 6. IAA-amino acid hydrolase ILR1-like 6. encodes a protein similar to IAA amino acid conjugate hydrolase."]
["AT2G47230","DUF6",329.35,-1.4436,0.18924,-7.6285,2.38E-14,{"v":6.36e-13,"d":"6.36E-13"},"full_name=DOMAIN OF UNKNOWN FUNCTION 724 6. agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 6). Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins.","AT5G58900","DIV1",226.45,1.5647,0.22737,6.8815,{"v":5.92e-12,"d":"5.92E-12"},1.58E-10,"Homeodomain-like transcriptional regulator.","AT3G28007","SWEET4",55.791,3.658,0.60449,6.0513,{"v":1.44E-9,"d":"1.44E-09"},{"v":3.76e-08,"d":"3.76E-08"},"Nodulin MtN3 family protein."]
["AT5G04660","CYP77A4",262.25,-1.7616,0.231,-7.6258,2.42E-14,{"v":6.49e-13,"d":"6.49E-13"},"full_name=cytochrome P450, family 77, subfamily A, polypeptide 4. cytochrome P450, family 77, subfamily A, polypeptide 4. encodes a protein with cytochrome P450 domain","AT5G62700","TUB3",3679.2,0.72514,0.10539,6.8804,{"v":5.97e-12,"d":"5.97E-12"},{"v":1.59e-10,"d":"1.59E-10"},"full_name=tubulin beta chain 3. tubulin beta chain 3. encodes tubulin beta-2/beta-3 chain","AT5G43700","ATAUX2-11",722.05,-0.99739,0.16491,-6.048,{"v":1.47e-09,"d":"1.47E-09"},{"v":3.83e-08,"d":"3.83E-08"},"full_name=AUXIN INDUCIBLE 2-11. AUX/IAA transcriptional regulator family protein. Auxin inducible protein similar to transcription factors."]
["AT3G02560",null,3447.2,0.66503,0.087353,7.6131,2.68E-14,{"v":7.15e-13,"d":"7.15E-13"},"Ribosomal protein S7e family protein.","AT3G26790","FUS3",114.1,-2.6173,0.3805,-6.8785,{"v":6.05e-12,"d":"6.05E-12"},{"v":1.61e-10,"d":"1.61E-10"},"full_name=FUSCA 3. AP2/B3-like transcriptional factor family protein. Transcriptional factor with high similarity to the B3 region of the VP1/ABI3-like proteins. Full length FUS3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of FUS3 requires the B3 DNA-binding domain and an activation domain. FUS3 specifies cotyledon identity. Regulator of gene expression during late embryogenesis. Involved in the control foliar organ identity in Arabidopsis by regulating the synthesis of two hormones, abscisic acid and gibberellin. FUS3 together with LEC1 positively regulate the abundance of the ABI3 protein in the seed.","AT3G45970","EXLA1",54.165,3.1186,0.51566,6.0478,{"v":1.47e-09,"d":"1.47E-09"},{"v":3.83e-08,"d":"3.83E-08"},"full_name=expansin-like A1. expansin-like A1. member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)"]
["AT4G31985",null,1779.9,0.7734,0.10164,7.6091,2.76E-14,{"v":7.36e-13,"d":"7.36E-13"},"Ribosomal protein L39 family protein.","AT4G10270","WIP4",1272.4,-0.88107,0.12831,-6.8666,{"v":6.57e-12,"d":"6.57E-12"},{"v":1.75e-10,"d":"1.75E-10"},"Wound-responsive family protein.","AT4G39210","APL3",7023.8,0.87039,0.144,6.0442,{"v":1.5E-9,"d":"1.50E-09"},{"v":3.91e-08,"d":"3.91E-08"},"Glucose-1-phosphate adenylyltransferase family protein. Encodes the large subunit of ADP-Glucose Pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL3 is the major large subunit isoform present in inflorescences, fruits and roots."]
["AT1G65290","mtACP2",1822.6,0.74652,0.098168,7.6045,{"v":2.86e-14,"d":"2.86E-14"},{"v":7.62e-13,"d":"7.62E-13"},"full_name=mitochondrial acyl carrier protein 2. mitochondrial acyl carrier protein 2. Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis.","AT3G50980","XERO1",300.98,-1.5551,0.22663,-6.8621,{"v":6.78e-12,"d":"6.78E-12"},{"v":1.8E-10,"d":"1.80E-10"},"full_name=dehydrin xero 1. dehydrin xero 1.","AT1G75490",null,86.469,2.2006,0.36427,6.0412,{"v":1.53e-09,"d":"1.53E-09"},{"v":3.98e-08,"d":"3.98E-08"},"Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought."]
["AT1G33110",null,268.46,1.6765,0.22052,7.6025,{"v":2.9e-14,"d":"2.90E-14"},{"v":7.73e-13,"d":"7.73E-13"},"MATE efflux family protein.","AT1G29670","GDSL1",39.735,4.8897,0.71266,6.8611,{"v":6.83e-12,"d":"6.83E-12"},1.81E-10,"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT4G19110",null,1956.8,0.77887,0.12897,6.039,{"v":1.55E-9,"d":"1.55E-09"},{"v":4.03e-08,"d":"4.03E-08"},"Protein kinase superfamily protein."]
["AT1G12200","FMO",1032.5,0.86787,0.11424,7.5972,{"v":3.03e-14,"d":"3.03E-14"},{"v":8.04e-13,"d":"8.04E-13"},"full_name=flavin monooxygenase. Flavin-binding monooxygenase family protein. Putative flavin monooxygenase.","AT4G12880","ENODL19",606.03,1.2591,0.18359,6.8584,{"v":6.96e-12,"d":"6.96E-12"},{"v":1.84e-10,"d":"1.84E-10"},"full_name=early nodulin-like protein 19. early nodulin-like protein 19.","AT4G25970","PSD3",743.76,0.9283,0.15375,6.0379,{"v":1.56E-9,"d":"1.56E-09"},{"v":4.05e-08,"d":"4.05E-08"},"full_name=phosphatidylserine decarboxylase 3. phosphatidylserine decarboxylase 3. Encodes the major form of the two non-mitochondrail phosphatidylserine decarboxylase. Located at the ER."]
["AT3G14350","SRF7",1014.4,-0.97054,0.12781,-7.5936,{"v":3.11e-14,"d":"3.11E-14"},{"v":8.25e-13,"d":"8.25E-13"},"full_name=STRUBBELIG-receptor family 7. STRUBBELIG-receptor family 7.","AT3G14930","HEME1",739.74,1.0117,0.14757,6.8557,{"v":7.1E-12,"d":"7.10E-12"},1.88E-10,"Uroporphyrinogen decarboxylase.","AT1G79920","Hsp70-15",1344.1,0.98148,0.16256,6.0374,{"v":1.57E-9,"d":"1.57E-09"},{"v":4.05e-08,"d":"4.05E-08"},"full_name=heat shock protein 70-15. Heat shock protein 70 (Hsp 70) family protein."]
["AT5G23420","HMGB6",288.71,1.4699,0.19362,7.5916,{"v":3.16e-14,"d":"3.16E-14"},{"v":8.37e-13,"d":"8.37E-13"},"full_name=high-mobility group box 6. high-mobility group box 6. Encodes HMGB6, a protein belonging to the subgroup of HMGB (high mobility group B) proteins. Localized in the nucleus. Binds to supercoiled DNA in vitro. HMGB6 is phosphorylated by protein kinase CK2alpha within its acidic C-terminal domain.","AT5G65810","CGR3",272.25,1.3443,0.19623,6.8504,{"v":7.36e-12,"d":"7.36E-12"},1.94E-10,"full_name=cotton Golgi-related 3. transmembrane protein. Encodes a Golgi apparatus-localized protein whose expression of the CGR3 gene is correlated with that of several cell wall biosynthetic genes and that may be involved in pectin modifications.","AT4G22220","ISU1",1589.8,0.85987,0.14245,6.0365,{"v":1.58e-09,"d":"1.58E-09"},{"v":4.07E-8,"d":"4.07E-08"},"SufE/NifU family protein. Encodes a mitochondrial protein similar to E.coli IscU. In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein."]
["AT1G27040","NPF4.5",123.27,-2.2659,0.29857,-7.5891,{"v":3.22e-14,"d":"3.22E-14"},8.52E-13,"Major facilitator superfamily protein.","AT3G13750","BGAL1",212.65,1.6194,0.23655,6.8462,{"v":7.58e-12,"d":"7.58E-12"},{"v":2e-10,"d":"2.00E-10"},"full_name=beta galactosidase 1. beta galactosidase 1. beta-galactosidase, glycosyl hydrolase family 35","AT1G67340",null,274.79,1.3056,0.21642,6.033,{"v":1.61E-9,"d":"1.61E-09"},{"v":4.16e-08,"d":"4.16E-08"},"HCP-like superfamily protein with MYND-type zinc finger."]
["AT3G11660","NHL1",120.46,-2.377,0.31326,-7.5879,3.25E-14,{"v":8.59e-13,"d":"8.59E-13"},"full_name=NDR1/HIN1-like 1. NDR1/HIN1-like 1. encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus. Localization of the gene product is similar to that of NHL3 (plasma membrane) but it is yet inconclusive.","AT3G22890","APS1",1990,-0.8135,0.11886,-6.8441,{"v":7.7e-12,"d":"7.70E-12"},2.02E-10,"full_name=ATP sulfurylase 1. ATP sulfurylase 1. encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis. It may also participate in selenium metabolism.","AT2G04350","LACS8",938.99,1.3189,0.21862,6.0328,{"v":1.61E-9,"d":"1.61E-09"},{"v":4.16e-08,"d":"4.16E-08"},"full_name=long-chain acyl-CoA synthetase 8. AMP-dependent synthetase and ligase family protein."]
["AT5G63420","emb2746",1043.6,1.0942,0.14422,7.5868,{"v":3.28e-14,"d":"3.28E-14"},{"v":8.64e-13,"d":"8.64E-13"},"full_name=embryo defective 2746. RNA-metabolising metallo-beta-lactamase family protein.","AT4G08170","ITPK3",417.78,-1.2982,0.18973,-6.8427,{"v":7.77e-12,"d":"7.77E-12"},{"v":2.04e-10,"d":"2.04E-10"},"Inositol 1,3,4-trisphosphate 5/6-kinase family protein.","AT3G48560","CSR1",2886.9,0.87016,0.14428,6.0308,{"v":1.63E-9,"d":"1.63E-09"},{"v":4.2e-08,"d":"4.20E-08"},"full_name=chlorsulfuron/imidazolinone resistant 1. chlorsulfuron/imidazolinone resistant 1. Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding."]
["AT1G30530","UGT78D1",1469.8,-1.0595,0.13965,-7.5867,{"v":3.28e-14,"d":"3.28E-14"},{"v":8.64e-13,"d":"8.64E-13"},"full_name=UDP-glucosyl transferase 78D1. UDP-glucosyl transferase 78D1. The At1g30530 gene encodes a UDP-rhamnose:flavonol-3-O-rhamnosyltransferase (UGT78D1) attaching a rhamnosyl residue to the 3-O-position of the flavonols kaempferol and quercetin","AT1G70670","CLO4",128.76,-2.186,0.31977,-6.8362,{"v":8.13e-12,"d":"8.13E-12"},{"v":2.13e-10,"d":"2.13E-10"},"full_name=caleosin 4. Caleosin-related family protein. The gene encodes a stress-responsive and OB-associated non-seed caleosin-like protein. It plays a negative regulator role in ABA signaling.","AT4G36420",null,294.18,-1.2459,0.2066,-6.0304,{"v":1.64e-09,"d":"1.64E-09"},{"v":4.21E-8,"d":"4.21E-08"},"Ribosomal protein L12 family protein."]
["AT5G24590","TIP",1022.6,-0.89217,0.11761,-7.5856,{"v":3.31e-14,"d":"3.31E-14"},{"v":8.7e-13,"d":"8.70E-13"},"full_name=TCV-interacting protein. TCV-interacting protein. Member of NAc protein family. Interacts with turnip crinkle virus (TCV) capsid protein. Transcription factor involved in regulating the defense response of Arabidopsis to TCV.","AT4G39050","KIN7.4",395.04,1.1846,0.17345,6.8295,8.52E-12,{"v":2.23e-10,"d":"2.23E-10"},"Kinesin motor family protein.","AT5G59730","EXO70H7",107.65,1.9742,0.32757,6.0266,{"v":1.67E-9,"d":"1.67E-09"},{"v":4.3e-08,"d":"4.30E-08"},"full_name=exocyst subunit exo70 family protein H7. exocyst subunit exo70 family protein H7. A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree."]
["AT2G36750","UGT73C1",69.458,3.7182,0.49021,7.5849,{"v":3.33e-14,"d":"3.33E-14"},{"v":8.74e-13,"d":"8.74E-13"},"full_name=UDP-glucosyl transferase 73C1. UDP-glucosyl transferase 73C1.","AT3G11410","PP2CA",1460.1,-1.2763,0.18697,-6.8264,{"v":8.71e-12,"d":"8.71E-12"},{"v":2.28e-10,"d":"2.28E-10"},"full_name=protein phosphatase 2CA. protein phosphatase 2CA. Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.","AT1G57990","PUP18",60.287,3.0041,0.49855,6.0257,{"v":1.68E-9,"d":"1.68E-09"},{"v":4.32e-08,"d":"4.32E-08"},"full_name=purine permease 18. purine permease 18. Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane."]
["AT4G15550","IAGLU",173.42,1.9964,0.26323,7.5844,{"v":3.34e-14,"d":"3.34E-14"},8.76E-13,"full_name=indole-3-acetate beta-D-glucosyltransferase. indole-3-acetate beta-D-glucosyltransferase. UDP-glucose:indole-3-acetate beta-D-glucosyltransferase","AT4G37870","PCK1",40960,-0.5712,0.083686,-6.8255,{"v":8.76e-12,"d":"8.76E-12"},{"v":2.29e-10,"d":"2.29E-10"},"full_name=phosphoenolpyruvate carboxykinase 1. phosphoenolpyruvate carboxykinase 1. Encodes a phosphoenolpyruvate carboxykinase that localizes to the cytosol.","AT1G51700","DOF1",74.775,2.384,0.39578,6.0237,{"v":1.71e-09,"d":"1.71E-09"},{"v":4.37e-08,"d":"4.37E-08"},"full_name=DOF zinc finger protein 1. DOF zinc finger protein 1. Encodes dof zinc finger protein (adof1)."]
["AT4G32410","CESA1",3416.3,-0.68649,0.090593,-7.5777,{"v":3.52e-14,"d":"3.52E-14"},{"v":9.21e-13,"d":"9.21E-13"},"full_name=cellulose synthase 1. cellulose synthase 1. Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.","AT3G06860","MFP2",10520,-0.65716,0.096281,-6.8254,{"v":8.77e-12,"d":"8.77E-12"},{"v":2.29e-10,"d":"2.29E-10"},"full_name=multifunctional protein 2. multifunctional protein 2. Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes.","AT2G24260","LRL1",784.03,1.4149,0.23502,6.0203,{"v":1.74E-9,"d":"1.74E-09"},{"v":4.45e-08,"d":"4.45E-08"},"full_name=LJRHL1-like 1. LJRHL1-like 1. Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1), At4g30980 (AtLRL2), and At5g58010 (AtLRL3)."]
["AT4G20260","PCAP1",607.49,-1.5469,0.20423,-7.5743,{"v":3.61e-14,"d":"3.61E-14"},{"v":9.45e-13,"d":"9.45E-13"},"full_name=plasma-membrane associated cation-binding protein 1. plasma-membrane associated cation-binding protein 1. Encodes a Ca2+ and Cu2+ binding protein. N-terminal myristylation on glycine 2 appears to enable it to associate tightly with the plasma membrane. Recombinant PCaP1 interacts strongly with phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2) and PtdIns (3,4,5)P3, and weakly with PtdIns(3,5)P2 and PtdIns(4,5). It also interacts with calmodulin (CaM) in a calcium-dependent manner. CaM does not interfere with PCaP1 membrane localization but does weaken interactions between it and the PtdInsPs. PCaP1 has an apparent Kd of 10 uM for Cu2+ and can bind six ions per protein. Transcript levels for PCaP1 first fall and then rise following exposure to CuCl2. Mannitol, sorbitol, and the flg22 oligopeptide also increase expression levels.","AT5G57090","EIR1",641.89,1.1457,0.16792,6.8232,{"v":8.91e-12,"d":"8.91E-12"},2.32E-10,"full_name=ETHYLENE INSENSITIVE ROOT 1. Auxin efflux carrier family protein. Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation resulted in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Protein turnover is affected by the proteasome and by endosomal cycling. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. Membrane sterol composition is essential for the acquisition of PIN2 polarity.","AT1G05894",null,62.76,2.8448,0.47343,6.0088,{"v":1.87E-9,"d":"1.87E-09"},{"v":4.77e-08,"d":"4.77E-08"},"hypothetical protein."]
["AT4G04890","PDF2",1824.5,-0.92453,0.1221,-7.5717,{"v":3.68e-14,"d":"3.68E-14"},{"v":9.63e-13,"d":"9.63E-13"},"full_name=protodermal factor 2. protodermal factor 2. Encodes a homeodomain protein that is expressed in the LI layer of the vegetative, floral and inflorescence meristems. Binds to the L1 box promoter element which is required in some proteins for L1 specific expression.","AT4G12910","scpl20",228.92,-1.6457,0.24143,-6.8166,{"v":9.32e-12,"d":"9.32E-12"},{"v":2.43e-10,"d":"2.43E-10"},"full_name=serine carboxypeptidase-like 20. serine carboxypeptidase-like 20.","AT5G56140",null,674.31,1.0212,0.17005,6.0052,{"v":1.91e-09,"d":"1.91E-09"},{"v":4.87e-08,"d":"4.87E-08"},"RNA-binding KH domain-containing protein."]
["AT5G65530","ATRLCK VI_A3",3603.2,-1.1716,0.15486,-7.5655,{"v":3.86e-14,"d":"3.86E-14"},{"v":1.01e-12,"d":"1.01E-12"},"Protein kinase superfamily protein. Encodes a protein kinase involved in mediating resistance to fungi and also trichome branch number. Kinase activity is increased by ROP6 which also affects its sub-cellular localization (becomes localized to the cell periphery_","AT4G04020","FIB",787.82,-1.103,0.16189,-6.8133,{"v":9.54e-12,"d":"9.54E-12"},{"v":2.48e-10,"d":"2.48E-10"},"full_name=fibrillin. fibrillin. Fibrillin precursor protein. The fibrillin preprotein, but not the mature protein interacts with ABI2. Regulated by abscisic acid response regulators. Involved in abscisic acid-mediated photoprotection.","AT4G24220","VEP1",1907,0.84169,0.14021,6.0031,{"v":1.94e-09,"d":"1.94E-09"},{"v":4.93e-08,"d":"4.93E-08"},"full_name=VEIN PATTERNING 1. NAD(P)-binding Rossmann-fold superfamily protein. encodes a progesterone-5beta-reductase-like protein. It has enone reductase activity against a wide range of substrates, including 3-oxo-&#916;-4,5-steroids in vitro. The in vivo substrates and product of this enzyme have not yet been elucidated but it is likely to participate in steroid metabolism. The protein contains a mammalian death domain involved in programmed cell death. The gene is expressed in the vascular system and mutants carrying a dominant mutation in the gene have defective vascular patterning. VEP1 gene expression is induced specifically by wounding."]
["AT1G47210","CYCA3;2",243.34,1.8924,0.25036,7.5585,4.08E-14,{"v":1.06e-12,"d":"1.06E-12"},"full_name=cyclin-dependent protein kinase 3;2. cyclin-dependent protein kinase 3;2.","AT5G42650","AOS",2082.8,-0.77881,0.11433,-6.8122,{"v":9.61e-12,"d":"9.61E-12"},{"v":2.49e-10,"d":"2.49E-10"},"full_name=allene oxide synthase. allene oxide synthase. Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity.","AT5G24380","YSL2",373.89,1.3973,0.23279,6.0023,{"v":1.95e-09,"d":"1.95E-09"},{"v":4.95E-8,"d":"4.95E-08"},"full_name=YELLOW STRIPE like 2. YELLOW STRIPE like 2. closest Arabidopsis homolog of Zea maize metal-phytosiderophore/metal-nicotianamine transporter ZmYS1"]
["AT4G24770","RBP31",4033.6,0.77161,0.10224,7.5471,4.45E-14,{"v":1.16e-12,"d":"1.16E-12"},"full_name=31-kDa RNA binding protein. 31-kDa RNA binding protein. Encodes a chloroplast RNA-binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Required for editing and stability of specific chloroplast mRNAs.","AT1G65880","BZO1",76.301,-4.8043,0.70616,-6.8035,{"v":1.02e-11,"d":"1.02E-11"},{"v":2.65e-10,"d":"2.65E-10"},"full_name=benzoyloxyglucosinolate 1. benzoyloxyglucosinolate 1. Encodes a benzoate-CoA ligase. Involved in the biosynthesis of benzoyloxyglucosinolate in Arabidopsis seeds.","AT1G50260","NTMC2T5.1",249,1.3852,0.23086,6.0002,{"v":1.97E-9,"d":"1.97E-09"},{"v":5.01e-08,"d":"5.01E-08"},"full_name=N-terminal-transmembrane-C2 domain type 5.1. N-terminal-transmembrane-C2 domain type 5.1."]
["AT1G59700","GSTU16",571.31,-1.1813,0.15657,-7.5446,{"v":4.54e-14,"d":"4.54E-14"},1.18E-12,"full_name=glutathione S-transferase TAU 16. glutathione S-transferase TAU 16. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","AT4G33530","KUP5",235.45,1.4791,0.21744,6.8026,{"v":1.03e-11,"d":"1.03E-11"},{"v":2.66e-10,"d":"2.66E-10"},"full_name=K+ uptake permease 5. K+ uptake permease 5. potassium transporter","AT1G47400","FEP3",55.492,-3.013,0.5023,-5.9985,{"v":1.99E-9,"d":"1.99E-09"},{"v":5.05e-08,"d":"5.05E-08"},"hypothetical protein."]
["AT5G58420",null,4694.3,0.63255,0.083892,7.5401,{"v":4.7e-14,"d":"4.70E-14"},{"v":1.22e-12,"d":"1.22E-12"},"Ribosomal protein S4 (RPS4A) family protein.","AT5G23810","AAP7",82.119,-2.6827,0.39488,-6.7937,{"v":1.09e-11,"d":"1.09E-11"},{"v":2.83e-10,"d":"2.83E-10"},"full_name=amino acid permease 7. amino acid permease 7. Encodes nonfunctional amino acid transporter. AAP7 is the most distantly related member of the AAP family, a group of well characterized amino acid transporters within the ATF1 superfamily. Expression of this gene has not been detected with RNA gel blots or promoter GUS studies.","AT4G33010","GLDP1",4649.5,0.7783,0.12975,5.9983,{"v":1.99E-9,"d":"1.99E-09"},{"v":5.05e-08,"d":"5.05E-08"},"full_name=glycine decarboxylase P-protein 1. glycine decarboxylase P-protein 1."]
["AT2G44410",null,1071.7,-1.0482,0.13914,-7.533,{"v":4.96e-14,"d":"4.96E-14"},1.29E-12,"RING/U-box superfamily protein.","AT1G68780",null,84.433,2.4316,0.35847,6.7833,{"v":1.17e-11,"d":"1.17E-11"},{"v":3.03e-10,"d":"3.03E-10"},"RNI-like superfamily protein.","AT1G48630","RACK1B_AT",857.15,-0.90719,0.1513,-5.996,{"v":2.02e-09,"d":"2.02E-09"},{"v":5.12e-08,"d":"5.12E-08"},"full_name=receptor for activated C kinase 1B. receptor for activated C kinase 1B. Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1B has no phenotype on its own and probably acts redundantly with RACK1A and RACK1C."]
["AT1G60950","FED A",1684.4,0.77482,0.10293,7.5279,{"v":5.15e-14,"d":"5.15E-14"},1.33E-12,"2Fe-2S ferredoxin-like superfamily protein. encodes a major leaf ferredoxin","AT1G53300","TTL1",316.31,1.3248,0.19581,6.7658,1.33E-11,{"v":3.42e-10,"d":"3.42E-10"},"full_name=tetratricopeptide-repeat thioredoxin-like 1. tetratricopetide-repeat thioredoxin-like 1. Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. The TTL family is required for osmotic stress tolerance and male sporogenesis.","AT3G54090","FLN1",400.09,-1.1755,0.1961,-5.9947,{"v":2.04E-9,"d":"2.04E-09"},{"v":5.15e-08,"d":"5.15E-08"},"full_name=fructokinase-like 1. fructokinase-like 1. Encodes a fructokinase-like protein (AT3G54090/FLN1, AT1G69200/FLN2), a member of the pfkB-carbohydrate kinase family. FLN1 and FLN2 are potential plastidial thioredoxin z (TRX z) targets. Mutants display mutant chloroplast development, general plant growth and development defects and defects in PEP-dependent transcription."]
["AT5G62740","HIR1",788.23,-1.0194,0.13546,-7.5253,{"v":5.26e-14,"d":"5.26E-14"},{"v":1.36e-12,"d":"1.36E-12"},"full_name=HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1. SPFH/Band 7/PHB domain-containing membrane-associated protein family.","AT2G34430","LHB1B1",463.98,2.0516,0.30333,6.7638,1.34E-11,{"v":3.46e-10,"d":"3.46E-10"},null,"AT4G03030",null,414.85,1.1867,0.19801,5.9933,{"v":2.06e-09,"d":"2.06E-09"},{"v":5.19e-08,"d":"5.19E-08"},"Galactose oxidase/kelch repeat superfamily protein."]
["AT1G21460","SWEET1",502.75,1.1658,0.155,7.5212,5.43E-14,{"v":1.4e-12,"d":"1.40E-12"},"Nodulin MtN3 family protein.","AT3G21690",null,422.91,-1.1434,0.16918,-6.7582,{"v":1.4E-11,"d":"1.40E-11"},3.59E-10,"MATE efflux family protein.","AT5G59870","HTA6",191.39,-1.4939,0.24952,-5.987,{"v":2.14e-09,"d":"2.14E-09"},{"v":5.38e-08,"d":"5.38E-08"},"full_name=histone H2A 6. histone H2A 6. Encodes HTA6, a histone H2A protein."]
["AT3G11700","FLA18",459.5,-1.2742,0.16944,-7.5202,{"v":5.47e-14,"d":"5.47E-14"},{"v":1.41e-12,"d":"1.41E-12"},"full_name=FASCICLIN-like arabinogalactan protein 18 precursor. FASCICLIN-like arabinogalactan protein 18 precursor.","AT3G45970","EXLA1",72.743,-3.1309,0.46333,-6.7575,{"v":1.4E-11,"d":"1.40E-11"},{"v":3.6E-10,"d":"3.60E-10"},"full_name=expansin-like A1. expansin-like A1. member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)","ATMG01360","cox1",47.94,3.2862,0.54898,5.986,{"v":2.15e-09,"d":"2.15E-09"},{"v":5.41e-08,"d":"5.41E-08"}]
["AT3G21055","PSBTN",1438.9,-0.88396,0.11757,-7.5184,{"v":5.54e-14,"d":"5.54E-14"},1.43E-12,"full_name=photosystem II subunit T. photosystem II subunit T. Encodes photosystem II 5 kD protein subunit PSII-T. This is a nuclear-encoded gene (PsbTn) which also has a plastid-encoded paralog (PsbTc).","AT5G26667","PYR6",510.51,1.1346,0.16791,6.7573,1.41E-11,{"v":3.6E-10,"d":"3.60E-10"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein. encodes a uridine 5'-monophosphate (UMP)/cytidine 5'-monophosphate (CMP) kinase.","AT5G10120",null,193.41,1.5971,0.26684,5.9851,{"v":2.16E-9,"d":"2.16E-09"},{"v":5.43e-08,"d":"5.43E-08"},"Ethylene insensitive 3 family protein."]
["AT4G30650",null,871.5,0.92152,0.12273,7.5086,{"v":5.98e-14,"d":"5.98E-14"},{"v":1.54e-12,"d":"1.54E-12"},"Low temperature and salt responsive protein family.","AT2G28150","SOK3",199.05,1.5922,0.23575,6.754,1.44E-11,{"v":3.68e-10,"d":"3.68E-10"},"UPSTREAM OF FLC protein (DUF966).","AT3G24650","ABI3",1172.7,0.86643,0.14511,5.9709,{"v":2.36e-09,"d":"2.36E-09"},{"v":5.92e-08,"d":"5.92E-08"},"full_name=ABA INSENSITIVE 3. AP2/B3-like transcriptional factor family protein. Homologous to the maize transcription factor Viviparous-1. Full length ABI3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of ABI3 requires the B3 DNA-binding domain and an activation domain. In addition to the known N-terminal-located activation domain, a second transcription activation domain was found in the B1 region of ABI3. ABI3 is essential for seed maturation. Regulator of the transition between embryo maturation and early seedling development. Putative seed-specific transcriptional activator. ABI3 is a central regulator in ABA signaling and is unstable in vivo. It interacts with and can by polyubiquitinated by AIP2 in vivo. Based on double mutant analyses, ABI3 interacts genetically with both FUS3 and LEC1 and is involved in controlling accumulation of chlorophyll and anthocyanins, sensitivity to abscisic acid, and expression of the members of the 12S storage protein gene family. In addition, both FUS3 and LEC1 regulate positively the abundance of the ABI3 protein in the seed. Alternative splicing of ABI3 is developmentally regulated by SUA (AT3G54230)."]
["AT5G57180","CIA2",406.18,1.7133,0.22829,7.5048,{"v":6.15e-14,"d":"6.15E-14"},{"v":1.58e-12,"d":"1.58E-12"},"full_name=chloroplast import apparatus 2. chloroplast import apparatus 2. Transcription regulator responsible for specific upregulation of the translocon genes atToc33 and atToc75 in leaves. Involved in protein import into chloroplast.","AT5G23750",null,68.148,-3.1334,0.46415,-6.7509,{"v":1.47e-11,"d":"1.47E-11"},{"v":3.76e-10,"d":"3.76E-10"},"Remorin family protein.","AT3G23920","BAM1",4178.5,2.391,0.40055,5.9692,{"v":2.38e-09,"d":"2.38E-09"},{"v":5.97e-08,"d":"5.97E-08"},"full_name=beta-amylase 1. beta-amylase 1. Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3."]
["AT2G40100","LHCB4.3",997.82,-1.4484,0.19303,-7.5033,{"v":6.22e-14,"d":"6.22E-14"},{"v":1.6E-12,"d":"1.60E-12"},"full_name=light harvesting complex photosystem II. light harvesting complex photosystem II. Lhcb4:3 protein (Lhcb4.3, light harvesting complex of photosystem II","AT1G54740",null,85.397,-2.6931,0.39932,-6.7442,1.54E-11,{"v":3.93e-10,"d":"3.93E-10"},"FANTASTIC four-like protein (DUF3049).","AT4G06746","RAP2.9",98.243,2.4481,0.41021,5.9678,{"v":2.41e-09,"d":"2.41E-09"},{"v":6.02e-08,"d":"6.02E-08"},"full_name=related to AP2 9. related to AP2 9. encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.9). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1 and RAP2.10."]
["AT5G25610","RD22",211.16,1.8,0.23997,7.5009,6.34E-14,1.62E-12,"full_name=RESPONSIVE TO DESSICATION 22. BURP domain-containing protein. responsive to dehydration 22 (RD22) mediated by ABA","AT4G02100",null,81.641,2.3689,0.35125,6.7441,1.54E-11,{"v":3.93e-10,"d":"3.93E-10"},"Heat shock protein DnaJ with tetratricopeptide repeat-containing protein.","AT1G28670","ARAB-1",61.443,-3.022,0.50647,-5.9668,{"v":2.42e-09,"d":"2.42E-09"},{"v":6.05e-08,"d":"6.05E-08"},"GDSL-like Lipase/Acylhydrolase superfamily protein. Arabidopsis thaliana lipase"]
["AT3G14680","CYP72A14",378.45,-1.301,0.17345,-7.5009,6.34E-14,1.62E-12,"full_name=cytochrome P450, family 72, subfamily A, polypeptide 14. cytochrome P450, family 72, subfamily A, polypeptide 14. putative cytochrome P450","AT2G38700","MVD1",312.11,1.2731,0.18885,6.7413,{"v":1.57e-11,"d":"1.57E-11"},{"v":4e-10,"d":"4.00E-10"},"full_name=mevalonate diphosphate decarboxylase 1. mevalonate diphosphate decarboxylase 1. Encodes mevalonate diphosphate decarboxylase, the enzyme that catalyzes the synthesis of isopentenyl diphosphate, used in sterol and isoprenoid biosynthesis. The protein appears to form a homodimeric complex. Incidentally, it was shown that the Arabidopsis MVD protein could also interact with its yeast homolog to form a heterodimer.","AT4G37410","CYP81F4",418.55,-1.131,0.18981,-5.9584,{"v":2.55e-09,"d":"2.55E-09"},{"v":6.36E-8,"d":"6.36E-08"},"full_name=cytochrome P450, family 81, subfamily F, polypeptide 4. cytochrome P450, family 81, subfamily F, polypeptide 4. member of CYP81F"]
["AT2G05710","ACO3",10158,0.8532,0.11375,7.5008,6.34E-14,1.62E-12,"full_name=aconitase 3. aconitase 3. Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT1G60010",null,195.03,1.6587,0.24607,6.7408,1.58E-11,{"v":4.01e-10,"d":"4.01E-10"},"D-ribose-binding periplasmic protein.","AT1G50630",null,330.59,1.6807,0.28227,5.9543,{"v":2.61e-09,"d":"2.61E-09"},{"v":6.51e-08,"d":"6.51E-08"},"extracellular ligand-gated ion channel protein (DUF3537)."]
["AT5G38650","UMP1B",1037.8,1.0869,0.14492,7.4996,{"v":6.4e-14,"d":"6.40E-14"},{"v":1.63e-12,"d":"1.63E-12"},"Proteasome maturation factor UMP1.","AT1G60730",null,240.51,-1.5138,0.2246,-6.7398,{"v":1.59e-11,"d":"1.59E-11"},4.03E-10,"NAD(P)-linked oxidoreductase superfamily protein.","AT4G39140",null,268.27,1.2835,0.21563,5.9521,{"v":2.65e-09,"d":"2.65E-09"},{"v":6.59e-08,"d":"6.59E-08"},"RING/U-box superfamily protein."]
["AT5G14910",null,1395.6,0.93444,0.12462,7.4982,{"v":6.47e-14,"d":"6.47E-14"},1.65E-12,"Heavy metal transport/detoxification superfamily protein.","AT4G32770","VTE1",759.74,-1.2697,0.18862,-6.7319,1.68E-11,{"v":4.25e-10,"d":"4.25E-10"},"full_name=VITAMIN E DEFICIENT 1. tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1). Tocopherol cyclase involved in tocopherol (vitamin E)synthesis. VTE1 over-expressing plants have increased tocopherol indicating VTE1 is a major limiting factor in tocopherol synthesis. Mutants defective in this gene accumulate high amounts of zeaxanthin in conditions of high light or low temperature. Plays a role in the adaptation to low temperature stress, notably phloem loading.","AT2G30970","ASP1",884.38,-0.932,0.1568,-5.9438,{"v":2.79e-09,"d":"2.79E-09"},{"v":6.92e-08,"d":"6.92E-08"},"full_name=aspartate aminotransferase 1. aspartate aminotransferase 1. ASPARTATE AMINOTRANSFERASE 1"]
["AT2G14520",null,647.8,-1.5091,0.20138,-7.4938,{"v":6.69e-14,"d":"6.69E-14"},{"v":1.7E-12,"d":"1.70E-12"},"CBS domain protein (DUF21).","AT1G27980","DPL1",222.78,-1.4969,0.2225,-6.7276,{"v":1.73e-11,"d":"1.73E-11"},{"v":4.37e-10,"d":"4.37E-10"},"full_name=dihydrosphingosine phosphate lyase. dihydrosphingosine phosphate lyase.","AT5G61410","RPE",2046.2,0.74173,0.12495,5.9363,{"v":2.92e-09,"d":"2.92E-09"},{"v":7.24E-8,"d":"7.24E-08"},"full_name=D-ribulose-5-phosphate-3-epimerase. D-ribulose-5-phosphate-3-epimerase. Arabidopsis thaliana ribulose-5-phosphate-3-epimerase mRNA"]
["AT4G04955","ALN",163.46,-1.9894,0.26551,-7.4929,{"v":6.74e-14,"d":"6.74E-14"},1.71E-12,"full_name=allantoinase. allantoinase. Encodes an allantoinase which is involved in allantoin degradation and assimilation. Gene expression was induced when allantoin was added to the medium. The insertion mutant, ataln m2-1, did not grow well on the MS medium where allantoin, instead of ammonium nitrate, was supplied.","AT4G34000","ABF3",140.97,2.0044,0.29815,6.7227,{"v":1.78e-11,"d":"1.78E-11"},{"v":4.51e-10,"d":"4.51E-10"},"full_name=abscisic acid responsive elements-binding factor 3. abscisic acid responsive elements-binding factor 3. Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.","AT4G02360",null,296.49,1.2576,0.21187,5.936,{"v":2.92e-09,"d":"2.92E-09"},{"v":7.24E-8,"d":"7.24E-08"},"transmembrane protein, putative (Protein of unknown function, DUF538)."]
["AT5G01840","OFP1",233.67,-1.6426,0.21932,-7.4895,{"v":6.92e-14,"d":"6.92E-14"},1.75E-12,"full_name=ovate family protein 1. ovate family protein 1. Encodes a member of the plant specific ovate protein family. Members of this family have been shown to bind to KNOX and BELL- like TALE class homeodomain proteins. This interaction may mediate relocalization of the TALE homeodomain from the nucleus to the cytoplasm. Functions as a transcriptional repressor that suppresses cell elongation.","AT2G02850","ARPN",86.696,-2.555,0.38012,-6.7216,{"v":1.8e-11,"d":"1.80E-11"},{"v":4.54e-10,"d":"4.54E-10"},"full_name=plantacyanin. plantacyanin. Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.","AT4G34555",null,242.12,-1.337,0.22526,-5.9353,{"v":2.93E-9,"d":"2.93E-09"},{"v":7.26e-08,"d":"7.26E-08"},"Ribosomal protein S25 family protein."]
["AT1G23290","RPL27AB",3359.6,0.63162,0.084366,7.4867,{"v":7.06e-14,"d":"7.06E-14"},1.79E-12,"Ribosomal protein L18e/L15 superfamily protein. Encodes a ribosomal protein L27A, a constituent of the large subunit of the ribosomal complex. Regulated by TCP20.","AT3G12960","SMP1",88.051,-3.0949,0.4606,-6.7193,{"v":1.83e-11,"d":"1.83E-11"},{"v":4.61e-10,"d":"4.61E-10"},"full_name=seed maturation protein 1. seed maturation protein.","AT1G61520","LHCA3",3906.2,1.0238,0.17255,5.9338,{"v":2.96e-09,"d":"2.96E-09"},{"v":7.32e-08,"d":"7.32E-08"},"full_name=photosystem I light harvesting complex gene 3. PSI type III chlorophyll a/b-binding protein. PSI type III chlorophyll a/b-binding protein (Lhca3*1)"]
["AT1G76490","HMG1",1571.9,-0.81492,0.10891,-7.4823,{"v":7.3e-14,"d":"7.30E-14"},1.85E-12,"full_name=hydroxy methylglutaryl CoA reductase 1. hydroxy methylglutaryl CoA reductase 1. Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine","AT3G17040","HCF107",179.56,1.5722,0.23432,6.7094,{"v":1.95e-11,"d":"1.95E-11"},{"v":4.92e-10,"d":"4.92E-10"},"full_name=high chlorophyll fluorescent 107. high chlorophyll fluorescent 107. It is a RNA tetratricopeptide repeat-containing protein required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. Localizes to the chloroplast membrane. Involved in regulating plastidial gene expression and biogenesis. It binds in the psbT?psbH intercistronic region and blocks the progression of 5&#8242; &#8594; 3&#8242; exoribonucleases, which defines the 5&#8242; end of processed psbH transcripts and also stabilizes the downstream RNA segment. In addition, HCF107 binding remodels the structure of the psbH 5&#8242; UTR in a way that can account for its ability to enhance psbH translation.","AT1G01580","FRO2",84.147,2.3549,0.39689,5.9333,{"v":2.97e-09,"d":"2.97E-09"},{"v":7.33e-08,"d":"7.33E-08"},"full_name=ferric reduction oxidase 2. ferric reduction oxidase 2. Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1."]
["AT3G52990",null,2659.4,-0.6642,0.088807,-7.4792,{"v":7.48e-14,"d":"7.48E-14"},{"v":1.89e-12,"d":"1.89E-12"},"Pyruvate kinase family protein.","AT3G21560","UGT84A2",1836.6,-0.92011,0.13716,-6.7082,1.97E-11,{"v":4.96e-10,"d":"4.96E-10"},"full_name=UDP-glucosyl transferase 84A2. UDP-Glycosyltransferase superfamily protein. Encodes a protein with sinapic acid:UDP-glucose glucosyltransferase activity. Mutants defective in this gene are hyper-fluorescent (which accumulate in their trichomes a compound that is likely to be 3',5'-dimethoxynaringenin chalcone or sinapoyltriacetic acid lactone, potential products of the concerted action of 4-coumarate CoA ligase and chalcone synthase on sinapic acid). Also shown to be required for Arabidopsis nonhost resistance to the Asian soybean rust pathogen Phakopsora pachyrhizi.","AT1G77170",null,146.43,1.6818,0.28356,5.9309,{"v":3.01e-09,"d":"3.01E-09"},{"v":7.43e-08,"d":"7.43E-08"},"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT5G57655",null,3891.4,-0.65131,0.08709,-7.4785,{"v":7.52e-14,"d":"7.52E-14"},{"v":1.9E-12,"d":"1.90E-12"},"xylose isomerase family protein.","AT1G60710","ATB2",1195.6,-1.0423,0.15548,-6.7038,2.03E-11,{"v":5.1E-10,"d":"5.10E-10"},"NAD(P)-linked oxidoreductase superfamily protein. Encodes ATB2.","AT1G34630",null,429.14,1.0731,0.18112,5.925,{"v":3.12E-9,"d":"3.12E-09"},{"v":7.69e-08,"d":"7.69E-08"},"transmembrane protein."]
["AT3G47650","BSD2",694.79,1.1891,0.15905,7.4761,{"v":7.65e-14,"d":"7.65E-14"},{"v":1.93e-12,"d":"1.93E-12"},"DnaJ/Hsp40 cysteine-rich domain superfamily protein.","AT5G36700","PGLP1",70.295,10.011,1.4942,6.7002,{"v":2.08e-11,"d":"2.08E-11"},{"v":5.22e-10,"d":"5.22E-10"},"full_name=2-phosphoglycolate phosphatase 1. 2-phosphoglycolate phosphatase 1.","AT1G07370","PCNA1",87.222,-2.1562,0.36416,-5.9209,{"v":3.2e-09,"d":"3.20E-09"},{"v":7.87e-08,"d":"7.87E-08"},"full_name=proliferating cellular nuclear antigen 1. proliferating cellular nuclear antigen 1. Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation. May be sumoylated."]
["AT4G36610",null,156.34,-2.1863,0.29245,-7.4758,{"v":7.67e-14,"d":"7.67E-14"},{"v":1.93e-12,"d":"1.93E-12"},"alpha/beta-Hydrolases superfamily protein.","AT1G20390",null,2464.8,1.135,0.16942,6.6998,2.09E-11,{"v":5.23e-10,"d":"5.23E-10"},"transposable_element_gene.","AT1G20010","TUB5",1142.1,-0.83292,0.14076,-5.9174,{"v":3.27e-09,"d":"3.27E-09"},{"v":8.03e-08,"d":"8.03E-08"},"full_name=tubulin beta-5 chain. tubulin beta-5 chain. beta tubulin"]
["AT2G27720",null,3457.5,0.64315,0.086044,7.4747,{"v":7.74e-14,"d":"7.74E-14"},{"v":1.94e-12,"d":"1.94E-12"},"60S acidic ribosomal protein family.","AT1G64650",null,864.11,1.0141,0.15148,6.6948,{"v":2.16e-11,"d":"2.16E-11"},{"v":5.4E-10,"d":"5.40E-10"},"Major facilitator superfamily protein.","AT3G63000","NPL41",515.38,1.0579,0.17879,5.917,{"v":3.28e-09,"d":"3.28E-09"},{"v":8.04e-08,"d":"8.04E-08"},"full_name=NPL4-like protein 1. NPL4-like protein 1."]
["AT5G53450","ORG1",3234.7,-0.63033,0.084479,-7.4613,{"v":8.57e-14,"d":"8.57E-14"},{"v":2.15e-12,"d":"2.15E-12"},"full_name=OBP3-responsive gene 1. OBP3-responsive protein 1.","AT1G19230","ATRBOHE",58.984,-3.8922,0.58151,-6.6933,{"v":2.18e-11,"d":"2.18E-11"},{"v":5.45e-10,"d":"5.45E-10"},"Riboflavin synthase-like superfamily protein.","AT5G38420","RBCS2B",2866.7,-0.83596,0.14141,-5.9117,{"v":3.39e-09,"d":"3.39E-09"},{"v":8.29e-08,"d":"8.29E-08"},"full_name=Rubisco small subunit 2B. Ribulose bisphosphate carboxylase (small chain) family protein. Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410)."]
["AT5G44410","ATBBE27",201.48,-1.7413,0.23352,-7.4568,{"v":8.86e-14,"d":"8.86E-14"},{"v":2.22e-12,"d":"2.22E-12"},"FAD-binding Berberine family protein.","AT1G51070","bHLH115",371.56,1.2982,0.194,6.6917,2.21E-11,{"v":5.51e-10,"d":"5.51E-10"},"full_name=basic Helix-Loop-Helix 115. basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT1G18330","EPR1",224,1.9508,0.33001,5.9114,{"v":3.39e-09,"d":"3.39E-09"},{"v":8.29e-08,"d":"8.29E-08"},"full_name=EARLY-PHYTOCHROME-RESPONSIVE1. Homeodomain-like superfamily protein. EARLY-PHYTOCHROME-RESPONSIVE1"]
["AT3G61990","OMTF3",2089,0.88795,0.11914,7.4533,{"v":9.11e-14,"d":"9.11E-14"},2.28E-12,"full_name=O-MTase family 3 protein. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. Encodes a protein methyltransferase. Involved in the methylation of plant transmembrane proteins.","AT4G13930","SHM4",1586.2,0.78555,0.1174,6.6913,2.21E-11,{"v":5.51e-10,"d":"5.51E-10"},"full_name=serine hydroxymethyltransferase 4. serine hydroxymethyltransferase 4. Encodes a serine hydroxymethyltransferase maximally expressed in root","AT5G66985",null,61.34,-3.2456,0.54905,-5.9113,{"v":3.39e-09,"d":"3.39E-09"},{"v":8.29e-08,"d":"8.29E-08"},"hypothetical protein."]
["AT5G53970","TAT7",1060.4,-1.46,0.1959,-7.4524,{"v":9.16e-14,"d":"9.16E-14"},{"v":2.29e-12,"d":"2.29E-12"},"full_name=tyrosine aminotransferase 7. Tyrosine transaminase family protein. encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment","AT4G26850","VTC2",1414.8,-0.8665,0.1295,-6.6912,2.21E-11,{"v":5.51e-10,"d":"5.51E-10"},"full_name=vitamin c defective 2. GDP-L-galactose phosphorylase 1. Encodes a novel protein involved in ascorbate biosynthesis, which was shown to catalyze the transfer of GMP from GDP-galactose to a variety of hexose-1-phosphate acceptors. Recessive mutation has a reduced amount of vitamin C, lower level of non-photochemical quenching, and reduced rate of conversion of violaxanthin to zeaxanthin in high light.","AT5G55280","FTSZ1-1",366.14,-1.2312,0.20842,-5.9075,{"v":3.47e-09,"d":"3.47E-09"},{"v":8.47e-08,"d":"8.47E-08"},"full_name=homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1. homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1. Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis. It is involved in chloroplast division."]
["AT2G44490","PEN2",95.808,2.9757,0.3999,7.4411,{"v":9.98e-14,"d":"9.98E-14"},{"v":2.49e-12,"d":"2.49E-12"},"full_name=PENETRATION 2. Glycosyl hydrolase superfamily protein. Encodes a glycosyl hydrolase that localizes to peroxisomes and acts as a component of an inducible preinvasion resistance mechanism. Required for mlo resistance.","AT1G12010","ACO3",429.78,-5.6815,0.84922,-6.6903,2.23E-11,{"v":5.54e-10,"d":"5.54E-10"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. Encodes a protein that appears to have 1-amino-cyclopropane-1-carboxylic acid oxidase activity based on mutant analyses.","AT2G18915","LKP2",203.86,1.4305,0.24229,5.9041,{"v":3.55e-09,"d":"3.55E-09"},{"v":8.64e-08,"d":"8.64E-08"},"full_name=LOV KELCH protein 2. LOV KELCH protein 2. encodes a member of F-box proteins that includes two other proteins in Arabidopsis (ZTL and FKF1). These proteins contain a unique structure containing a PAS domain at their N-terminus, an F-box motif, and 6 kelch repeats at their C-terminus. Overexpression results in arrhythmic phenotypes for a number of circadian clock outputs in both constant light and constant darkness, long hypocotyls under multiple fluences of both red and blue light, and a loss of photoperiodic control of flowering time. Although this the expression of this gene itself is not regulated by circadian clock, it physically interacts with Dof transcription factors that are transcriptionally regulated by circadian rhythm. LKP2 interacts with Di19, CO/COL family proteins."]
["AT4G32770","VTE1",1948.1,-0.83264,0.11193,-7.439,1.01E-13,{"v":2.53e-12,"d":"2.53E-12"},"full_name=VITAMIN E DEFICIENT 1. tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1). Tocopherol cyclase involved in tocopherol (vitamin E)synthesis. VTE1 over-expressing plants have increased tocopherol indicating VTE1 is a major limiting factor in tocopherol synthesis. Mutants defective in this gene accumulate high amounts of zeaxanthin in conditions of high light or low temperature. Plays a role in the adaptation to low temperature stress, notably phloem loading.","AT2G33330","PDLP3",157.42,2.2391,0.33469,6.6901,2.23E-11,{"v":5.54e-10,"d":"5.54E-10"},"full_name=plasmodesmata-located protein 3. plasmodesmata-located protein 3. Encodes a plasmodesmal protein that affects the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.","AT1G55450",null,67.196,2.4666,0.41781,5.9038,{"v":3.55e-09,"d":"3.55E-09"},{"v":8.64e-08,"d":"8.64E-08"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein."]
["AT1G30380","PSAK",879.43,-1.0761,0.14467,-7.4378,{"v":1.02e-13,"d":"1.02E-13"},{"v":2.55e-12,"d":"2.55E-12"},"full_name=photosystem I subunit K. photosystem I subunit K. Encodes subunit K of photosystem I reaction center.","AT5G12250","TUB6",1329.2,0.81168,0.12134,6.6895,{"v":2.24e-11,"d":"2.24E-11"},{"v":5.55e-10,"d":"5.55E-10"},"full_name=beta-6 tubulin. beta-6 tubulin. Encodes a beta-tubulin. Expression of TUB6 has been shown to decrease in response to cold treatment.","AT2G45670","LPEAT2",735.73,0.91955,0.15578,5.9027,{"v":3.58E-9,"d":"3.58E-09"},{"v":8.69e-08,"d":"8.69E-08"},"calcineurin B subunit-like protein."]
["AT3G16640","TCTP",21436,0.5409,0.07275,7.4351,{"v":1.05e-13,"d":"1.05E-13"},{"v":2.6e-12,"d":"2.60E-12"},"full_name=translationally controlled tumor protein. translationally controlled tumor protein. Encodes a protein homologous to translationally controlled tumor protein (TCTP) from Drosophila. In flies, TCTP functions guanine nucleotide exchange factor in the TOR signaling pathway. TCTP is expressed throughout the plant with highest levels seen in meristematic regions of the shoot and root. Loss of function alleles are not transmitted through the male gametophyte due to defects in pollen tube growth. Hypomorphs, generated through RNAi, are dwarf and have smaller cells. These plants also have defects in lateral and primary root growth as well as root hair growth. The phenotypes are similar to TOR mutants suggesting that TCTP functions in the is pathway in Arabidopsis as well.","AT3G20660","2024-10-04",216.56,-1.6622,0.24867,-6.6843,{"v":2.32e-11,"d":"2.32E-11"},{"v":5.75e-10,"d":"5.75E-10"},"full_name=organic cation/carnitine transporter4. organic cation/carnitine transporter4.","AT2G24550",null,115.6,1.883,0.31905,5.9019,{"v":3.59e-09,"d":"3.59E-09"},{"v":8.72E-8,"d":"8.72E-08"},"major centromere autoantigen B-like protein."]
["AT3G07770","Hsp89.1",2121.1,0.81182,0.1092,7.4342,{"v":1.05e-13,"d":"1.05E-13"},2.61E-12,"full_name=HEAT SHOCK PROTEIN 89.1. HEAT SHOCK PROTEIN 89.1.","AT5G45470",null,188.77,1.5563,0.23294,6.681,2.37E-11,{"v":5.87e-10,"d":"5.87E-10"},"transmembrane protein, putative (DUF594).","AT1G72150","PATL1",571.28,1.2997,0.22023,5.9015,{"v":3.6E-9,"d":"3.60E-09"},{"v":8.73e-08,"d":"8.73E-08"},"full_name=PATELLIN 1. PATELLIN 1. novel cell-plate-associated protein that is related in sequence to proteins involved in membrane trafficking in other eukaryotes"]
["AT3G51820","G4",825.74,1.0197,0.13721,7.4314,1.07E-13,2.66E-12,"UbiA prenyltransferase family protein. Encodes a protein with chlorophyll synthase activity. This enzyme has been shown to perform the esterification of chlorophyllide (a and b), the last step of chlorophyll biosynthesis. Although it can use either geranylgeranyl pyrophosphate (GGPP) or phytyl pyrophosphate (PhyPP) as substrates, the esterification reaction was faster with GGPP than with PhyPP.","AT1G63120","RBL2",380.44,-1.1857,0.17775,-6.6706,{"v":2.55e-11,"d":"2.55E-11"},6.29E-10,"full_name=RHOMBOID-like 2. RHOMBOID-like 2. AtRBL2 has been identified as a rhomboid protein involved in regulated intramembrane proteolysis (RIP). The enzyme has the proteolytic activity and substrate specificity comparable to the Drosophila Rho-1 protein.","AT5G61030","GR-RBP3",307.93,-1.2426,0.21058,-5.9009,{"v":3.61e-09,"d":"3.61E-09"},{"v":8.75e-08,"d":"8.75E-08"},"full_name=glycine-rich RNA-binding protein 3. glycine-rich RNA-binding protein 3. encodes a glycine-rich RNA binding protein. Gene expression is induced by cold."]
["AT1G23020","FRO3",1652.3,-0.93405,0.12576,-7.4273,{"v":1.11e-13,"d":"1.11E-13"},2.74E-12,"full_name=ferric reduction oxidase 3. ferric reduction oxidase 3. Encodes a ferric chelate reductase whose transcription is regulated by FIT1. Expressed in the root, shoot, flower and cotyledon.","AT5G62210",null,126.61,-2.1243,0.31846,-6.6704,{"v":2.55e-11,"d":"2.55E-11"},6.29E-10,"Embryo-specific protein 3, (ATS3).","AT2G22900","MUCI10",261.73,-1.2786,0.2167,-5.9003,{"v":3.63e-09,"d":"3.63E-09"},{"v":8.77e-08,"d":"8.77E-08"},"Galactosyl transferase GMA12/MNN10 family protein."]
["AT3G44820",null,271.37,-1.495,0.2013,-7.4268,{"v":1.11e-13,"d":"1.11E-13"},{"v":2.75e-12,"d":"2.75E-12"},"Phototropic-responsive NPH3 family protein.","AT2G21530",null,212.75,1.4716,0.22069,6.6684,{"v":2.59e-11,"d":"2.59E-11"},{"v":6.37e-10,"d":"6.37E-10"},"SMAD/FHA domain-containing protein.","AT3G48530","KING1",666.39,1.0391,0.17622,5.8965,{"v":3.71e-09,"d":"3.71E-09"},{"v":8.96e-08,"d":"8.96E-08"},"full_name=SNF1-related protein kinase regulatory subunit gamma 1. SNF1-related protein kinase regulatory subunit gamma 1."]
["AT5G48230","ACAT2",1134.5,-1.1213,0.15104,-7.4237,{"v":1.14e-13,"d":"1.14E-13"},{"v":2.81e-12,"d":"2.81E-12"},"full_name=acetoacetyl-CoA thiolase 2. acetoacetyl-CoA thiolase 2. Encodes an acetoacetyl-CoA thiolase that generates the bulk of the acetoacetyl-CoA precursor needed for the cytosolic localized, mevalonate-derived isoprenoids biosynthetic pathway. Loss-of-function mutants are embryo lethal.","AT4G18280",null,127.07,-2.0167,0.30267,-6.6632,{"v":2.68e-11,"d":"2.68E-11"},6.59E-10,"glycine-rich cell wall protein-like protein.","AT1G80380","GLYK",679.16,0.97017,0.16463,5.8929,{"v":3.79e-09,"d":"3.79E-09"},{"v":9.15e-08,"d":"9.15E-08"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein. encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle."]
["AT3G02470","SAMDC",14022,-0.65538,0.088439,-7.4105,{"v":1.26e-13,"d":"1.26E-13"},{"v":3.1e-12,"d":"3.10E-12"},"full_name=S-adenosylmethionine decarboxylase. S-adenosylmethionine decarboxylase. Encodes a S-adenosylmethionine decarboxylase involved in polyamine biosynthesis.","AT2G37360","ABCG2",69.892,-3.1122,0.46721,-6.6613,{"v":2.71e-11,"d":"2.71E-11"},{"v":6.66e-10,"d":"6.66E-10"},"full_name=ATP-binding cassette G2. ABC-2 type transporter family protein. Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16).","AT3G06680",null,224.25,-1.4285,0.24244,-5.8922,{"v":3.81e-09,"d":"3.81E-09"},{"v":9.17e-08,"d":"9.17E-08"},"Ribosomal L29e protein family."]
["AT1G78380","GSTU19",4761.6,0.81771,0.11039,7.4076,{"v":1.29e-13,"d":"1.29E-13"},3.17E-12,"full_name=glutathione S-transferase TAU 19. glutathione S-transferase TAU 19. Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.","AT4G09960","STK",55.358,-3.9778,0.59716,-6.6612,2.72E-11,{"v":6.66e-10,"d":"6.66E-10"},"full_name=SEEDSTICK. K-box region and MADS-box transcription factor family protein. Encodes a MADS box transcription factor expressed in the carpel and ovules. Plays a maternal role in fertilization and seed development.","AT1G43700","VIP1",511.65,1.115,0.18935,5.8883,{"v":3.9e-09,"d":"3.90E-09"},{"v":9.38e-08,"d":"9.38E-08"},"full_name=VIRE2-interacting protein 1. VIRE2-interacting protein 1. Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half. Involved in osmosensory response."]
["AT5G46290","KASI",1979.1,-1.0593,0.14304,-7.4059,{"v":1.3E-13,"d":"1.30E-13"},{"v":3.21e-12,"d":"3.21E-12"},"full_name=3-ketoacyl-acyl carrier protein synthase I. 3-ketoacyl-acyl carrier protein synthase I. Encodes beta-ketoacyl-[acyl carrier protein] synthase I (KASI). Crucial for fatty acid synthesis. Plays a role in chloroplast division and embryo development.","AT1G20070",null,157.72,1.8599,0.2793,6.6591,2.76E-11,{"v":6.75e-10,"d":"6.75E-10"},"hypothetical protein.","AT5G23300","PYRD",125.93,-1.7581,0.29887,-5.8824,{"v":4.04e-09,"d":"4.04E-09"},{"v":9.71e-08,"d":"9.71E-08"},"full_name=pyrimidine d. pyrimidine d. dihydroorotate dehydrogenase, catalyses fourth step of pyrimidine biosynthesis"]
["AT4G14320","RPL36AB",3081.6,0.66115,0.089331,7.4011,{"v":1.35e-13,"d":"1.35E-13"},3.32E-12,"Zinc-binding ribosomal protein family protein.","AT2G34910",null,40.197,4.5732,0.6874,6.6529,{"v":2.87e-11,"d":"2.87E-11"},{"v":7.03e-10,"d":"7.03E-10"},"root hair specific protein.","AT3G05200","ATL6",155.51,1.5939,0.27097,5.8821,{"v":4.05e-09,"d":"4.05E-09"},{"v":9.72e-08,"d":"9.72E-08"},"full_name=Arabidopsis toxicos en levadura 6. RING/U-box superfamily protein. Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6)."]
["AT5G56000","Hsp81.4",881.8,0.9078,0.12267,7.4005,1.36E-13,{"v":3.33e-12,"d":"3.33E-12"},"full_name=HEAT SHOCK PROTEIN 81.4. HEAT SHOCK PROTEIN 81.4.","AT5G47810","PFK2",646.01,-1.291,0.19409,-6.6511,{"v":2.9100000000000002E-11,"d":"2.91E-11"},{"v":7.11e-10,"d":"7.11E-10"},"full_name=phosphofructokinase 2. phosphofructokinase 2.","AT1G47128","RD21A",4389.9,0.8294,0.14104,5.8806,{"v":4.09e-09,"d":"4.09E-09"},{"v":9.79e-08,"d":"9.79E-08"},"full_name=responsive to dehydration 21A. Granulin repeat cysteine protease family protein. cysteine proteinase precursor-like protein/ dehydration stress-responsive gene (RD21). Has been shown to have peptide ligase activity and protease activity in vitro. RD21 is involved in immunity to the necrotrophic fungal pathogen Botrytis cinerea."]
["AT1G67750",null,310.67,1.4015,0.18943,7.3982,{"v":1.38e-13,"d":"1.38E-13"},{"v":3.38e-12,"d":"3.38E-12"},"Pectate lyase family protein.","AT1G32930","GALT31A",179.35,1.633,0.2456,6.649,{"v":2.95e-11,"d":"2.95E-11"},{"v":7.2E-10,"d":"7.20E-10"},"Galactosyltransferase family protein.","AT4G02930",null,905.54,-0.93306,0.15871,-5.8789,{"v":4.13e-09,"d":"4.13E-09"},{"v":9.88e-08,"d":"9.88E-08"},"GTP binding Elongation factor Tu family protein."]
["AT3G45030",null,2427.4,0.66431,0.089948,7.3854,{"v":1.52e-13,"d":"1.52E-13"},{"v":3.72e-12,"d":"3.72E-12"},"Ribosomal protein S10p/S20e family protein.","AT2G29500","HSP17.6B",260.62,-1.6222,0.24409,-6.6457,{"v":3.02e-11,"d":"3.02E-11"},{"v":7.36e-10,"d":"7.36E-10"},"HSP20-like chaperones superfamily protein.","AT5G61600","ERF104",49.237,3.1193,0.53089,5.8756,{"v":4.21e-09,"d":"4.21E-09"},{"v":1.01E-7,"d":"1.01E-07"},"full_name=ethylene response factor 104. ethylene response factor 104. encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5."]
["AT3G23400","FIB4",1464.6,-0.87509,0.11852,-7.3837,1.54E-13,{"v":3.76e-12,"d":"3.76E-12"},"full_name=fibrillin 4. Plastid-lipid associated protein PAP / fibrillin family protein. Encodes FIBRILLIN 4 (FIB4). The fibrillins are a large family of chloroplast proteins that have been linked with stress tolerance and disease resistance. FIBRILLIN 4 is required for plastoglobule development and stress resistance.","AT4G39510","CYP96A12",457.42,1.1968,0.18012,6.6445,3.04E-11,{"v":7.4e-10,"d":"7.40E-10"},"full_name=cytochrome P450, family 96, subfamily A, polypeptide 12. cytochrome P450, family 96, subfamily A, polypeptide 12. member of CYP96A","AT1G67100","LBD40",345.13,-1.8798,0.31998,-5.8749,{"v":4.23e-09,"d":"4.23E-09"},{"v":1.01E-7,"d":"1.01E-07"},"full_name=LOB domain-containing protein 40. LOB domain-containing protein 40."]
["AT1G52340","ABA2",271.42,-1.7614,0.23877,-7.3769,{"v":1.62e-13,"d":"1.62E-13"},{"v":3.95e-12,"d":"3.95E-12"},"full_name=ABA DEFICIENT 2. NAD(P)-binding Rossmann-fold superfamily protein. Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.","AT1G23720","EXT15",65.39,9.9079,1.492,6.6409,3.12E-11,{"v":7.58e-10,"d":"7.58E-10"},"Proline-rich extensin-like family protein.","AT2G41180","SIB2",78.885,2.3581,0.4015,5.8733,{"v":4.27e-09,"d":"4.27E-09"},{"v":1.02E-7,"d":"1.02E-07"},"full_name=sigma factor binding protein 2. VQ motif-containing protein."]
["AT1G78830",null,491.32,1.5651,0.2122,7.3757,{"v":1.63e-13,"d":"1.63E-13"},{"v":3.98e-12,"d":"3.98E-12"},"Curculin-like (mannose-binding) lectin family protein.","AT1G05170",null,248.43,1.345,0.20262,6.6382,{"v":3.17e-11,"d":"3.17E-11"},{"v":7.71e-10,"d":"7.71E-10"},"Galactosyltransferase family protein.","AT5G14120",null,333.28,1.2936,0.22026,5.8729,{"v":4.28e-09,"d":"4.28E-09"},{"v":1.02E-7,"d":"1.02E-07"},"Major facilitator superfamily protein."]
["AT4G32520","SHM3",1554.5,0.7656,0.10383,7.3736,1.66E-13,{"v":4.04e-12,"d":"4.04E-12"},"full_name=serine hydroxymethyltransferase 3. serine hydroxymethyltransferase 3. Encodes a serine hydroxymethyltransferase SHMT3 located in the plastid.","AT4G37930","SHM1",2069.9,0.79924,0.12044,6.6359,{"v":3.22e-11,"d":"3.22E-11"},{"v":7.82e-10,"d":"7.82E-10"},"full_name=serine transhydroxymethyltransferase 1. serine transhydroxymethyltransferase 1. Encodes a protein with mitochondrial serine hydroxymethyltransferase activity, which functions in the photorespiratory pathway, catalyzes the conversion of serine and tetrahydrofolate to glycine and 5,10-methylene tetrahydrofolate. Involved in controlling cell damage caused by abiotic stress, such as high light and salt and the hypersensitive defense response of plants.","AT1G16750",null,214.68,1.3719,0.23389,5.8656,{"v":4.48e-09,"d":"4.48E-09"},{"v":1.06E-7,"d":"1.06E-07"},"GPI-anchored adhesin-like protein, putative (Protein of unknown function, DUF547)."]
["AT3G12800","SDRB",1796.1,-0.85953,0.11663,-7.3695,1.71E-13,4.16E-12,"full_name=short-chain dehydrogenase-reductase B. short-chain dehydrogenase-reductase B.","AT2G26740","SEH",1116.5,-0.956,0.14413,-6.6327,{"v":3.3e-11,"d":"3.30E-11"},{"v":7.98e-10,"d":"7.98E-10"},"full_name=soluble epoxide hydrolase. soluble epoxide hydrolase. Encodes a soluble epoxide hydrolase whose expression is induced by auxin and water stress.","AT1G69260","AFP1",300.95,1.586,0.27083,5.856,{"v":4.74e-09,"d":"4.74E-09"},{"v":1.13e-07,"d":"1.13E-07"},"full_name=ABI five binding protein. ABI five binding protein."]
["AT5G64030",null,1302.5,-0.83567,0.11341,-7.3688,1.72E-13,{"v":4.18e-12,"d":"4.18E-12"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT3G05910","ATPAE12",636.94,0.96296,0.14523,6.6307,{"v":3.34e-11,"d":"3.34E-11"},8.08E-10,"Pectinacetylesterase family protein.","AT1G08650","PPCK1",999.14,1.3723,0.23434,5.8558,{"v":4.75e-09,"d":"4.75E-09"},{"v":1.13e-07,"d":"1.13E-07"},"full_name=phosphoenolpyruvate carboxylase kinase 1. phosphoenolpyruvate carboxylase kinase 1. Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light."]
["AT2G41340","RPB5D",448.87,-1.4911,0.2027,-7.356,1.89E-13,{"v":4.6e-12,"d":"4.60E-12"},"full_name=RNA polymerase II fifth largest subunit, D. RNA polymerase II fifth largest subunit, D. NRPE5-like protein of unknown function; homologous to budding yeast RPB5","AT5G24910","CYP714A1",54.27,-4.9815,0.7513,-6.6305,{"v":3.35e-11,"d":"3.35E-11"},8.08E-10,"full_name=cytochrome P450, family 714, subfamily A, polypeptide 1. cytochrome P450, family 714, subfamily A, polypeptide 1. Member of CYP714A. Encodes one of the two tandemly duplicated gene pair ELA1 (CYP714A1) and ELA2 (CYP714A2), homologs of the rice cytochrome P450 monooxygenase gene EUI1. Double mutation of ELA1 and ELA2 results in increased biomass and enlarged organs.","AT2G42540","COR15A",62.381,2.7031,0.46172,5.8546,{"v":4.78e-09,"d":"4.78E-09"},{"v":1.13e-07,"d":"1.13E-07"},"full_name=cold-regulated 15a. cold-regulated 15a. A cold-regulated gene whose product is targeted to the chloroplast. Cor15am protects stromal proteins from aggregation under various stress conditions. Constitutive expression increases freezing tolerance in protoplasts in vitro and chloroplasts in vivo. NMR and x-ray diffraction studies suggest that COR15a alters the intrinsic curvature of the inner membrane of chloroplast envelope. Late Embryogenesis abundant protein (LEA). Protects chloroplast membranes during freezing."]
["AT2G21130",null,660.62,1.01,0.13742,7.3497,{"v":1.99e-13,"d":"1.99E-13"},{"v":4.81e-12,"d":"4.81E-12"},"Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein.","AT3G48200",null,249.82,1.541,0.23253,6.627,{"v":3.42e-11,"d":"3.42E-11"},{"v":8.26e-10,"d":"8.26E-10"},"transmembrane protein.","AT4G17600","LIL3:1",808.15,-0.88725,0.15173,-5.8475,{"v":4.99e-09,"d":"4.99E-09"},{"v":1.18E-7,"d":"1.18E-07"},"Chlorophyll A-B binding family protein. Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1."]
["AT5G50600","HSD1",3226.2,-3.1015,0.42203,-7.3489,{"v":2e-13,"d":"2.00E-13"},{"v":4.83e-12,"d":"4.83E-12"},"full_name=hydroxysteroid dehydrogenase 1. hydroxysteroid dehydrogenase 1. Encodes a hydroxysteroid dehydrogenase shown to act as a NADP+-dependent 11&beta;-,17&beta;-hydroxysteroid dehydrogenase/17&beta;-ketosteroid reductase called HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination. To date, the endogenous substrates of this enzyme are not known.","AT2G37630","AS1",445.45,1.1455,0.17287,6.6265,{"v":3.44e-11,"d":"3.44E-11"},{"v":8.28e-10,"d":"8.28E-10"},"full_name=ASYMMETRIC LEAVES 1. myb-like HTH transcriptional regulator family protein. Encodes a MYB-domain protein involved in specification of the leaf proximodistal axis. Mutation results in lobed and dissected leaves with a characteristic asymmetry. Homologous to the Antirrhinum PHANTASTICA (PHAN) and maize ROUGH SHEATH2 (RS2) genes Asymmetric placement of auxin response at the distal leaf tip precedes visible asymmetric leaf growth. Acts alongside AXR1 to exclude BP expression in leaves and with PIN1 to repress BP and promote lateral organ growth. Interacts physically with AS2 to form a complex that binds to the BP promoter and silences BP. Also functions as a regulator of the plant immune response.","AT3G12490","CYSB",1915.8,0.7326,0.12535,5.8443,{"v":5.09e-09,"d":"5.09E-09"},{"v":1.2e-07,"d":"1.20E-07"},"full_name=cystatin B. cystatin B. Encodes a protein with cysteine proteinase inhibitor activity. Overexpression increases tolerance to abiotic stressors (i.e.salt,osmotic, cold stress)."]
["AT3G52850","VSR1",5843,-0.59654,0.08119,-7.3474,2.02E-13,{"v":4.88e-12,"d":"4.88E-12"},"full_name=vacuolar sorting receptor homolog 1. vacuolar sorting receptor homolog 1. Encodes the Vacuolar Sorting Receptor-1 (VSR-1)/Epidermal Growth Factor Receptor-like protein1(VSR-1/ATELP1). Binds vacuolar targeting signals. Involved in sorting seed storage proteins into vacuoles.","AT5G20740",null,36.135,4.7664,0.71978,6.6221,{"v":3.54e-11,"d":"3.54E-11"},{"v":8.52e-10,"d":"8.52E-10"},"Plant invertase/pectin methylesterase inhibitor superfamily protein.","AT1G18540",null,3691.2,-0.81998,0.14035,-5.8424,{"v":5.15e-09,"d":"5.15E-09"},{"v":1.21e-07,"d":"1.21E-07"},"Ribosomal protein L6 family protein."]
["AT4G30600",null,2132.8,-0.73922,0.10062,-7.3467,{"v":2.03e-13,"d":"2.03E-13"},{"v":4.9e-12,"d":"4.90E-12"},"signal recognition particle receptor alpha subunit family protein.","AT1G13950","ELF5A-1",39.797,4.7116,0.71158,6.6213,{"v":3.56e-11,"d":"3.56E-11"},{"v":8.56e-10,"d":"8.56E-10"},"full_name=eukaryotic elongation factor 5A-1. eukaryotic elongation factor 5A-1. Encodes eukaryotic translation initiation factor 5A (EIF-5A).In mammalian cells it functions as a shuttle protein that translocates mRNA from the nucleus to cytoplasmic ribosomes. Overexpression results in an increase in both primary and secondary xylem formation. In RNAi suppressed lines, xylem formation is reduced.","AT5G12950",null,154.85,-1.6536,0.28312,-5.8406,{"v":5.2e-09,"d":"5.20E-09"},{"v":1.23E-7,"d":"1.23E-07"},"proline-tRNA ligase (DUF1680)."]
["AT2G37220",null,11049,0.61952,0.084331,7.3463,{"v":2.04e-13,"d":"2.04E-13"},{"v":4.9e-12,"d":"4.90E-12"},"RNA-binding (RRM/RBD/RNP motifs) family protein. Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT4G03205","hemf2",182.67,1.6539,0.2502,6.6102,{"v":3.84e-11,"d":"3.84E-11"},{"v":9.21e-10,"d":"9.21E-10"},"Coproporphyrinogen III oxidase.","AT2G38400","AGT3",605.25,0.95747,0.16394,5.8402,{"v":5.21E-9,"d":"5.21E-09"},{"v":1.23E-7,"d":"1.23E-07"},"full_name=alanine:glyoxylate aminotransferase 3. alanine:glyoxylate aminotransferase 3. alanine:glyoxylate aminotransferase 2 homolog (AGT3) mRNA,"]
["AT1G21680",null,357.88,-1.6683,0.2271,-7.3463,{"v":2.04e-13,"d":"2.04E-13"},{"v":4.9e-12,"d":"4.90E-12"},"DPP6 N-terminal domain-like protein.","AT4G20020","MORF1",857.37,-0.85983,0.13013,-6.6075,{"v":3.91e-11,"d":"3.91E-11"},{"v":9.37e-10,"d":"9.37E-10"},"full_name=multiple organellar RNA editing factor 1. multiple organellar RNA editing factor. Encodes a protein involved in RNA editing in mitochondria.","AT5G07220","BAG3",230.45,1.4928,0.25569,5.8383,{"v":5.27e-09,"d":"5.27E-09"},{"v":1.24E-7,"d":"1.24E-07"},"full_name=BCL-2-associated athanogene 3. BCL-2-associated athanogene 3. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development."]
["AT1G14980","CPN10",1863.5,0.73256,0.099729,7.3455,{"v":2.05e-13,"d":"2.05E-13"},4.92E-12,"full_name=chaperonin 10. chaperonin 10. Encodes mitochondrial-localized chaperonin 10 that complements the E.coli groES mutant. Its mRNA is upregulated in response to heat shock treatment and is expressed uniformly in various organs.","AT2G25520",null,1136.3,0.9022,0.13659,6.6051,{"v":3.97e-11,"d":"3.97E-11"},{"v":9.51e-10,"d":"9.51E-10"},"Drug/metabolite transporter superfamily protein.","AT4G04960","LECRK-VII.1",146.08,1.6405,0.28099,5.838,{"v":5.28E-9,"d":"5.28E-09"},{"v":1.24E-7,"d":"1.24E-07"},"Concanavalin A-like lectin protein kinase family protein."]
["AT1G04778",null,104.79,-2.6214,0.35688,-7.3454,{"v":2.05e-13,"d":"2.05E-13"},4.92E-12,"hypothetical protein.","AT2G47800","ABCC4",765.84,-0.93059,0.14092,-6.6035,{"v":4.02e-11,"d":"4.02E-11"},{"v":9.6e-10,"d":"9.60E-10"},"full_name=ATP-binding cassette C4. multidrug resistance-associated protein 4. Encodes a plasma membrane localized ATPase transporter involved in multidrug transport. The expression of this gene is upregulated by herbicide safeners such as benoxacor, fluxofenim and fenclorim.","AT4G31210",null,364.46,-1.1729,0.20097,-5.8364,{"v":5.33e-09,"d":"5.33E-09"},{"v":1.25e-07,"d":"1.25E-07"},"DNA topoisomerase, type IA, core."]
["AT5G04380",null,206.07,-1.7758,0.24179,-7.3443,2.07E-13,{"v":4.96e-12,"d":"4.96E-12"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT3G11050","FER2",181.36,-1.728,0.26189,-6.5983,{"v":4.16e-11,"d":"4.16E-11"},{"v":9.93e-10,"d":"9.93E-10"},"full_name=ferritin 2. ferritin 2.","AT1G13990",null,182.57,1.4843,0.25439,5.8349,{"v":5.38E-9,"d":"5.38E-09"},{"v":1.26e-07,"d":"1.26E-07"},"plant/protein."]
["AT2G34420","LHB1B2",4445.4,-0.89208,0.12152,-7.3407,{"v":2.12e-13,"d":"2.12E-13"},{"v":5.09e-12,"d":"5.09E-12"},null,"AT3G23430","PHO1",64.733,-3.3869,0.51364,-6.5939,{"v":4.28e-11,"d":"4.28E-11"},{"v":1.02E-9,"d":"1.02E-09"},"full_name=phosphate 1. phosphate 1. Encodes a protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains. The mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. Its expression is repressed by phosphate (Pi) in shoots, and transiently induced by phosphite (Phi) in roots and shoots.","AT4G17230","SCL13",260.09,1.2895,0.22103,5.834,{"v":5.41e-09,"d":"5.41E-09"},{"v":1.27e-07,"d":"1.27E-07"},"full_name=SCARECROW-like 13. SCARECROW-like 13. Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family."]
["AT1G04660",null,1564.5,-4.4503,0.60645,-7.3383,{"v":2.16e-13,"d":"2.16E-13"},5.17E-12,"glycine-rich protein.","AT1G08320","TGA9",86.87,-2.66,0.4036,-6.5907,4.38E-11,{"v":1.04e-09,"d":"1.04E-09"},"full_name=TGACG (TGA) motif-binding protein 9. bZIP transcription factor family protein.","AT3G26240",null,222.04,1.4089,0.24161,5.8314,{"v":5.5e-09,"d":"5.50E-09"},{"v":1.28e-07,"d":"1.28E-07"},"Cysteine/Histidine-rich C1 domain family protein."]
["AT5G50700","HSD1",3226.7,-3.1004,0.42287,-7.3319,{"v":2.27e-13,"d":"2.27E-13"},{"v":5.42e-12,"d":"5.42E-12"},"full_name=hydroxysteroid dehydrogenase 1. hydroxysteroid dehydrogenase 1. Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination.","AT4G03320","Tic20-IV",161.66,-1.7244,0.26175,-6.5882,{"v":4.45e-11,"d":"4.45E-11"},{"v":1.06e-09,"d":"1.06E-09"},"full_name=translocon at the inner envelope membrane of chloroplasts 20-IV. translocon at the inner envelope membrane of chloroplasts 20-IV. Encodes a component of the TIC (translocon at the inner envelope membrane of chloroplasts) protein translocation machinery mediating the protein translocation across the inner envelope of plastids. The Arabidopsis genome encodes four Tic20 homologous proteins, AT1G04940(Tic20-I), AT2G47840(Tic20-II), AT4G03320(Tic20-IV) and AT5G55710(Tic20-V).","AT5G18110","NCBP",766.53,0.95179,0.16328,5.829,{"v":5.57e-09,"d":"5.57E-09"},{"v":1.3E-7,"d":"1.30E-07"},"full_name=novel cap-binding protein. Putative cap-binding protein."]
["AT2G36970",null,670.23,-1.0093,0.13772,-7.3284,{"v":2.33e-13,"d":"2.33E-13"},{"v":5.56e-12,"d":"5.56E-12"},"UDP-Glycosyltransferase superfamily protein.","AT5G06930",null,63.902,2.675,0.40604,6.5881,{"v":4.45e-11,"d":"4.45E-11"},{"v":1.06e-09,"d":"1.06E-09"},"nucleolar-like protein.","AT3G12630","SAP5",632.64,0.96417,0.16545,5.8274,{"v":5.63e-09,"d":"5.63E-09"},{"v":1.31E-7,"d":"1.31E-07"},"full_name=stress associated protein 5. A20/AN1-like zinc finger family protein. Encodes a protein with E3 ligase activity that acts as a positive regulator of stress responses in Arabidopsis."]
["AT5G24490",null,2243.1,0.70427,0.096108,7.3279,{"v":2.34e-13,"d":"2.34E-13"},{"v":5.57e-12,"d":"5.57E-12"},"30S ribosomal protein.","AT4G29520","SES1",146.02,1.7485,0.26566,6.5819,{"v":4.64e-11,"d":"4.64E-11"},{"v":1.1e-09,"d":"1.10E-09"},"nucleophosmin.","AT3G14440","NCED3",53.971,3.0375,0.52128,5.827,{"v":5.64e-09,"d":"5.64E-09"},{"v":1.31E-7,"d":"1.31E-07"},"full_name=nine-cis-epoxycarotenoid dioxygenase 3. nine-cis-epoxycarotenoid dioxygenase 3. Encodes 9-<i>cis</i>-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. Regulated in response to drought and salinity. Expressed in roots, flowers and seeds. Localized to the chloroplast stroma and thylakoid membrane."]
["AT1G68590","PSRP3/1",1297.6,1.0324,0.14091,7.3265,2.36E-13,{"v":5.62e-12,"d":"5.62E-12"},"full_name=plastid-speci&#64257;c ribosomal protein 3/1. Ribosomal protein PSRP-3/Ycf65.","AT5G22940","F8H",43.023,3.5787,0.54398,6.5787,{"v":4.75e-11,"d":"4.75E-11"},{"v":1.12e-09,"d":"1.12E-09"},"full_name=FRA8 homolog. glucuronoxylan glucuronosyltransferase, putative. Homolog of FRA8 (AT2G28110), a member of a member of glycosyltransferase family 47; exhibits high sequence similarity to tobacco (Nicotiana plumbaginifolia) pectin glucuronyltransferase.","AT4G27860","MEB1",756.8,-1.0094,0.17328,-5.8257,{"v":5.69E-9,"d":"5.69E-09"},{"v":1.32e-07,"d":"1.32E-07"},"full_name=MEMBRANE OF ER BODY 1. vacuolar iron transporter (VIT) family protein."]
["AT1G32990","PRPL11",1134.8,0.84881,0.11586,7.326,2.37E-13,5.63E-12,"full_name=plastid ribosomal protein l11. plastid ribosomal protein l11. mutant has Decreased effective quantum yield of photosystem II; Pale green plants; Reduced growth rate; Plastid Ribosomal Protein L11","AT2G34150","WAVE1",92.894,2.1344,0.32471,6.5732,{"v":4.92e-11,"d":"4.92E-11"},{"v":1.17e-09,"d":"1.17E-09"},"SCAR family protein. Encodes a member of the SCAR family.These proteins are part of a complex (WAVE) complex.The SCAR subunit activates the ARP2/3 complex which in turn act as a nucleator for actin filaments.","AT2G33330","PDLP3",120.06,-2.1044,0.36134,-5.8239,{"v":5.75e-09,"d":"5.75E-09"},{"v":1.33e-07,"d":"1.33E-07"},"full_name=plasmodesmata-located protein 3. plasmodesmata-located protein 3. Encodes a plasmodesmal protein that affects the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain."]
["AT1G23440",null,539.02,-1.2515,0.17084,-7.3254,2.38E-13,{"v":5.65e-12,"d":"5.65E-12"},"Peptidase C15, pyroglutamyl peptidase I-like protein.","AT3G41979",null,2729.8,-10.984,1.6724,-6.5677,{"v":5.11e-11,"d":"5.11E-11"},{"v":1.21E-9,"d":"1.21E-09"},"5.8SrRNA. 5.8SrRNA","AT4G23890","NdhS",383.25,1.217,0.209,5.8228,{"v":5.79e-09,"d":"5.79E-09"},{"v":1.34e-07,"d":"1.34E-07"},"full_name=NADH dehydrogenase-like complex S. NAD(P)H-quinone oxidoreductase subunit S."]
["AT2G38800",null,498.26,-1.3253,0.18092,-7.3253,2.38E-13,{"v":5.65e-12,"d":"5.65E-12"},"Plant calmodulin-binding protein-like protein.","AT4G20260","PCAP1",146.31,-2.0792,0.31658,-6.5676,{"v":5.11e-11,"d":"5.11E-11"},{"v":1.21E-9,"d":"1.21E-09"},"full_name=plasma-membrane associated cation-binding protein 1. plasma-membrane associated cation-binding protein 1. Encodes a Ca2+ and Cu2+ binding protein. N-terminal myristylation on glycine 2 appears to enable it to associate tightly with the plasma membrane. Recombinant PCaP1 interacts strongly with phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2) and PtdIns (3,4,5)P3, and weakly with PtdIns(3,5)P2 and PtdIns(4,5). It also interacts with calmodulin (CaM) in a calcium-dependent manner. CaM does not interfere with PCaP1 membrane localization but does weaken interactions between it and the PtdInsPs. PCaP1 has an apparent Kd of 10 uM for Cu2+ and can bind six ions per protein. Transcript levels for PCaP1 first fall and then rise following exposure to CuCl2. Mannitol, sorbitol, and the flg22 oligopeptide also increase expression levels.","AT4G16950","RPP5",209.24,1.4841,0.25508,5.818,{"v":5.95e-09,"d":"5.95E-09"},{"v":1.38e-07,"d":"1.38E-07"},"full_name=RECOGNITION OF PERONOSPORA PARASITICA 5. Disease resistance protein (TIR-NBS-LRR class) family. Contains a putative nucleotide binding site and leucine-rich repeats. Similar to the plant resistance genes N and L6, and to the toll and interleukin-1 receptors. Confers resistance to Peronospora parasitica."]
["AT4G15560","CLA1",1103.9,-0.82239,0.11234,-7.3208,{"v":2.47e-13,"d":"2.47E-13"},{"v":5.84e-12,"d":"5.84E-12"},"full_name=CLOROPLASTOS ALTERADOS 1. Deoxyxylulose-5-phosphate synthase. Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis","AT5G19220","APL1",342.01,1.2051,0.18375,6.5584,{"v":5.44e-11,"d":"5.44E-11"},{"v":1.28e-09,"d":"1.28E-09"},"full_name=ADP glucose pyrophosphorylase large subunit 1. ADP glucose pyrophosphorylase large subunit 1. Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL1 is the major large subunit isoform present in leaves. Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions.","AT5G06755",null,46.808,6.5549,1.1269,5.8169,{"v":6E-9,"d":"6.00E-09"},{"v":1.39e-07,"d":"1.39E-07"},"hypothetical protein."]
["AT3G29030","EXPA5",184.88,-2.4237,0.33107,-7.3206,{"v":2.47e-13,"d":"2.47E-13"},{"v":5.84e-12,"d":"5.84E-12"},"full_name=expansin A5. expansin A5. Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)","AT1G58270","ZW9",3768.2,0.85888,0.13101,6.5561,{"v":5.52e-11,"d":"5.52E-11"},{"v":1.3e-09,"d":"1.30E-09"},"TRAF-like family protein. ZW9 mRNA, complete cds","AT1G29930","CAB1",27163,0.99502,0.17111,5.815,{"v":6.06e-09,"d":"6.06E-09"},{"v":1.4e-07,"d":"1.40E-07"},"full_name=chlorophyll A/B binding protein 1. chlorophyll A/B binding protein 1. Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center."]
["AT2G26150","HSFA2",119.29,2.2154,0.30311,7.3088,{"v":2.7e-13,"d":"2.70E-13"},{"v":6.37e-12,"d":"6.37E-12"},"full_name=heat shock transcription factor A2. heat shock transcription factor A2. member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.","AT3G57520","SIP2",4001.5,-1.0796,0.16468,-6.5559,{"v":5.53e-11,"d":"5.53E-11"},{"v":1.3e-09,"d":"1.30E-09"},"full_name=seed imbibition 2. seed imbibition 2. SIP2 encodes a raffinose-specific alpha-galactosidase that catalyzes the breakdown of raffinose into alpha-galatose and sucrose. This enzyme may function in unloading raffinose from the phloem as part of sink metabolism. Although it was originally predicted to act as a raffinose synthase (RS), that activity was not observed for recombinant SIP2.","AT3G54130",null,225.31,1.336,0.22976,5.8147,{"v":6.08e-09,"d":"6.08E-09"},{"v":1.4e-07,"d":"1.40E-07"},"Josephin family protein."]
["AT2G05920","SBT1.8",3659.1,-0.68731,0.094055,-7.3075,2.72E-13,{"v":6.42e-12,"d":"6.42E-12"},"Subtilase family protein.","AT5G43750","PnsB5",165.46,1.6053,0.24488,6.5556,{"v":5.54e-11,"d":"5.54E-11"},{"v":1.3e-09,"d":"1.30E-09"},"full_name=Photosynthetic NDH subcomplex B 5. NAD(P)H dehydrogenase 18.","AT5G22460",null,226.84,1.3861,0.23848,5.8124,{"v":6.16e-09,"d":"6.16E-09"},{"v":1.42E-7,"d":"1.42E-07"},"alpha/beta-Hydrolases superfamily protein."]
["AT5G03380","ATHMP43",217.59,-1.661,0.22737,-7.3054,{"v":2.77e-13,"d":"2.77E-13"},{"v":6.51e-12,"d":"6.51E-12"},"Heavy metal transport/detoxification superfamily protein.","AT1G18730","PnsB4",251.67,1.3402,0.20446,6.5546,{"v":5.58e-11,"d":"5.58E-11"},{"v":1.31E-9,"d":"1.31E-09"},"full_name=Photosynthetic NDH subcomplex B 4. NDH dependent flow 6. likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located on the thylakoid membrane. Mutant has impaired NAD(P)H dehydrogenase activity.","AT4G29520","SES1",104.77,-2.0158,0.34692,-5.8107,{"v":6.22e-09,"d":"6.22E-09"},{"v":1.43E-7,"d":"1.43E-07"},"nucleophosmin."]
["AT1G62770","PMEI9",258.83,1.4653,0.20123,7.2819,{"v":3.29e-13,"d":"3.29E-13"},{"v":7.74e-12,"d":"7.74E-12"},"Plant invertase/pectin methylesterase inhibitor superfamily protein.","AT1G27760","SAT32",711.19,-0.93745,0.14317,-6.5478,5.84E-11,{"v":1.37E-9,"d":"1.37E-09"},"full_name=SALT-TOLERANCE 32. interferon-related developmental regulator family protein / IFRD protein family. Encodes a protein with similarity to human interferon-related developmental regulator (IFRD)that is involved in salt tolerance. Loss of function mutations are hypersensitive to salt stress and have reduced fertility. SAT32 is found in the cytoplasm but appears to translocate to the nucleus when plants are subject to salt stress.","AT4G30470",null,196.86,1.4638,0.25194,5.8103,{"v":6.24E-9,"d":"6.24E-09"},{"v":1.43E-7,"d":"1.43E-07"},"NAD(P)-binding Rossmann-fold superfamily protein."]
["AT5G63310","NDPK2",902.47,1.1633,0.15983,7.2786,{"v":3.37e-13,"d":"3.37E-13"},{"v":7.93e-12,"d":"7.93E-12"},"full_name=nucleoside diphosphate kinase 2. nucleoside diphosphate kinase 2. Maintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning.","AT4G24190","SHD",3216.6,0.71223,0.10888,6.5415,{"v":6.09e-11,"d":"6.09E-11"},{"v":1.43E-9,"d":"1.43E-09"},"full_name=SHEPHERD. Chaperone protein htpG family protein. encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.","AT1G29090",null,282.48,1.3908,0.23942,5.8089,{"v":6.29e-09,"d":"6.29E-09"},{"v":1.44e-07,"d":"1.44E-07"},"Cysteine proteinases superfamily protein."]
["AT2G05910",null,177.89,-2.0013,0.27497,-7.278,{"v":3.39e-13,"d":"3.39E-13"},{"v":7.95e-12,"d":"7.95E-12"},"LURP-one-like protein (DUF567).","AT2G39900","WLIM2a",121.3,1.8535,0.28351,6.5378,{"v":6.24e-11,"d":"6.24E-11"},{"v":1.46e-09,"d":"1.46E-09"},"full_name=WLIM2a. GATA type zinc finger transcription factor family protein. Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization.","AT4G27020",null,200.55,1.449,0.24944,5.8088,{"v":6.29e-09,"d":"6.29E-09"},{"v":1.44e-07,"d":"1.44E-07"},"inositol-1,4,5-trisphosphate 5-phosphatase."]
["AT2G32230","PRORP1",929.34,1.0327,0.14201,7.2721,{"v":3.54e-13,"d":"3.54E-13"},{"v":8.29e-12,"d":"8.29E-12"},"full_name=proteinaceous RNase P 1. proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs.","AT3G02875","ILR1",505.17,-1.0506,0.1608,-6.5335,{"v":6.42e-11,"d":"6.42E-11"},{"v":1.5E-9,"d":"1.50E-09"},"full_name=IAA-LEUCINE RESISTANT 1. Peptidase M20/M25/M40 family protein. Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors.","AT5G02244",null,41.148,-8.8253,1.5208,-5.803,{"v":6.52e-09,"d":"6.52E-09"},{"v":1.49E-7,"d":"1.49E-07"},"pseudogene. Pseudogene of AT3G57870; AHUS5 (SUMO CONJUGATION ENZYME 1); ubiquitin-protein ligase"]
["AT1G14130","DAO1",431.73,-1.2227,0.16814,-7.2718,3.55E-13,{"v":8.31e-12,"d":"8.31E-12"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT2G23450",null,235.15,-1.4054,0.21529,-6.528,{"v":6.66e-11,"d":"6.66E-11"},{"v":1.55E-9,"d":"1.55E-09"},"Protein kinase superfamily protein.","AT1G55680",null,1239.7,0.80536,0.13879,5.8029,{"v":6.52e-09,"d":"6.52E-09"},{"v":1.49E-7,"d":"1.49E-07"},"Transducin/WD40 repeat-like superfamily protein."]
["AT1G05010","EFE",102.03,2.5432,0.35028,7.2606,{"v":3.85e-13,"d":"3.85E-13"},{"v":9e-12,"d":"9.00E-12"},"full_name=ethylene-forming enzyme. ethylene-forming enzyme. Encodes 1-aminocyclopropane-1-carboxylate oxidase","AT1G49430","LACS2",295.55,1.559,0.23886,6.5268,{"v":6.72e-11,"d":"6.72E-11"},{"v":1.56E-9,"d":"1.56E-09"},"full_name=long-chain acyl-CoA synthetase 2. long-chain acyl-CoA synthetase 2. Encodes a long chain acyl-CoA synthetase that catalyzes the synthesis of omega-hydroxy fatty acyl-CoA intermediates in the pathway to cutin synthesis. Required for repression of lateral root formation.","AT2G39890","PROT1",128.97,-2.111,0.36389,-5.8012,{"v":6.59e-09,"d":"6.59E-09"},{"v":1.5e-07,"d":"1.50E-07"},"full_name=proline transporter 1. proline transporter 1. Encodes a proline transporter with affinity for gly betaine, proline and GABA. Protein is expressed in the vascular tissue, specifically the phloem."]
["AT5G40850","UPM1",596.85,-1.0126,0.13946,-7.2606,{"v":3.85e-13,"d":"3.85E-13"},{"v":9e-12,"d":"9.00E-12"},"full_name=urophorphyrin methylase 1. urophorphyrin methylase 1. Encodes a urophorphyrin III methylase that catalyzes S-adenosyl-L-methionine-dependent transmethylation in a multistep process involving the formation of a covalently linked complex with S-adenosyl-L-methionine.","AT5G62490","HVA22B",317.44,-2.1587,0.33124,-6.5171,{"v":7.17e-11,"d":"7.17E-11"},{"v":1.67E-9,"d":"1.67E-09"},"full_name=HVA22 homologue B. HVA22 homologue B. Part of the AtHVA22 family. Protein expression is ABA- and stress-inducible.","AT4G13850","GR-RBP2",1199.5,-0.80902,0.1395,-5.7993,{"v":6.66e-09,"d":"6.66E-09"},{"v":1.52e-07,"d":"1.52E-07"},"full_name=glycine-rich RNA-binding protein 2. glycine-rich RNA-binding protein 2. Encodes a glycine-rich RNA-binding protein. Gene expression is induced by cold."]
["AT5G35630","GS2",844.48,0.9637,0.13286,7.2537,{"v":4.05e-13,"d":"4.05E-13"},{"v":9.46e-12,"d":"9.46E-12"},"full_name=glutamine synthetase 2. glutamine synthetase 2. chloroplastic glutamine synthetase","AT2G23380","CLF",379.46,1.1375,0.17457,6.5161,{"v":7.22e-11,"d":"7.22E-11"},{"v":1.68E-9,"d":"1.68E-09"},"full_name=CURLY LEAF. SET domain-containing protein. Similar to the product of the Polycomb-group gene Enhancer of zeste. Required for stable repression of AG and AP3. Putative role in cell fate determination. Involved in the control of leaf morphogenesis. mutants exhibit curled, involute leaves. AGAMOUS and APETALA3 are ectopically expressed in the mutant.","AT1G28380","NSL1",137.05,1.6553,0.2855,5.798,{"v":6.71e-09,"d":"6.71E-09"},{"v":1.53e-07,"d":"1.53E-07"},"full_name=necrotic spotted lesions 1. MAC/Perforin domain-containing protein. This gene is predicted to encode a protein involved in negatively regulating salicylic acid-related defense responses and cell death programs. nsl1 mutants develop necrotic lesions spontaneously and show other features of a defense response, such as higher levels of SA and disease resistance-related transcripts, in the absence of a biotic stimulus. The NSL1 protein is predicted to have a MACPF domain, found in proteins that form a transmembrane pore in mammalian immune responses. NSL1 transcript levels do not appear to change in response to biotic stresses, but are elevated by cycloheximide in seedlings, and by sodium chloride in roots."]
["AT4G17600","LIL3:1",935.84,0.88825,0.12251,7.2505,4.15E-13,{"v":9.67e-12,"d":"9.67E-12"},"Chlorophyll A-B binding family protein. Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1.","AT2G43530",null,302.22,-1.5883,0.24379,-6.515,{"v":7.27e-11,"d":"7.27E-11"},{"v":1.69E-9,"d":"1.69E-09"},"scorpion toxin-like knottin superfamily protein. Encodes a defensin-like (DEFL) family protein.","AT2G39700","EXPA4",185.68,-1.61,0.27775,-5.7968,{"v":6.76e-09,"d":"6.76E-09"},{"v":1.54E-7,"d":"1.54E-07"},"full_name=expansin A4. expansin A4. putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana."]
["AT5G09870","CESA5",370.97,-1.2704,0.17525,-7.2493,{"v":4.19e-13,"d":"4.19E-13"},{"v":9.75e-12,"d":"9.75E-12"},"full_name=cellulose synthase 5. cellulose synthase 5. Encodes a cellulose synthase CESA5 that produces seed mucilage cellulose.","AT5G07510","GRP14",56.253,-5.3454,0.82089,-6.5117,{"v":7.43e-11,"d":"7.43E-11"},{"v":1.72e-09,"d":"1.72E-09"},"full_name=glycine-rich protein 14. glycine-rich protein 14. encodes a glycine-rich protein that is expressed in low abundance in stems and leaves, and very low abundance in flowers.","AT2G46270","GBF3",777.07,1.2068,0.20821,5.7962,{"v":6.78e-09,"d":"6.78E-09"},{"v":1.54E-7,"d":"1.54E-07"},"full_name=G-box binding factor 3. G-box binding factor 3. encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3%C2%A1%C2%AFs DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2."]
["AT5G48930","HCT",762.06,-1.015,0.14006,-7.2471,4.26E-13,{"v":9.89e-12,"d":"9.89E-12"},"full_name=hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase. hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase. At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth.","AT1G69526",null,98.425,2.7961,0.42961,6.5085,{"v":7.59e-11,"d":"7.59E-11"},{"v":1.76e-09,"d":"1.76E-09"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT5G57610",null,538.29,1.1132,0.19229,5.7892,{"v":7.07e-09,"d":"7.07E-09"},{"v":1.6E-7,"d":"1.60E-07"},"kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein."]
["AT3G44890","RPL9",1551.1,0.89531,0.12363,7.2418,{"v":4.43e-13,"d":"4.43E-13"},{"v":1.03e-11,"d":"1.03E-11"},"full_name=ribosomal protein L9. ribosomal protein L9. Plastid ribosomal protein CL9","AT3G44460","DPBF2",357.52,-5.4651,0.83973,-6.5082,{"v":7.61e-11,"d":"7.61E-11"},{"v":1.76e-09,"d":"1.76E-09"},"Basic-leucine zipper (bZIP) transcription factor family protein. basic leucine zipper transcription factor (BZIP67), identical to basic leucine zipper transcription factor GI:18656053 from (Arabidopsis thaliana); identical to cDNA basic leucine zipper transcription factor (atbzip67 gene) GI:18656052. Located in the nucleus and expressed during seed maturation in the cotyledons.","AT1G03990",null,85.711,2.5605,0.44235,5.7883,{"v":7.11e-09,"d":"7.11E-09"},{"v":1.61E-7,"d":"1.61E-07"},"Long-chain fatty alcohol dehydrogenase family protein."]
["AT5G26742","emb1138",7727.1,0.60691,0.083812,7.2414,{"v":4.44e-13,"d":"4.44E-13"},{"v":1.03e-11,"d":"1.03E-11"},"full_name=embryo defective 1138. DEAD box RNA helicase (RH3).","AT1G66240","ATX1",2019.9,-0.98854,0.15195,-6.5058,{"v":7.73e-11,"d":"7.73E-11"},{"v":1.78e-09,"d":"1.78E-09"},"full_name=homolog of anti-oxidant 1. homolog of anti-oxidant 1.","AT1G22160",null,406.89,1.2425,0.2149,5.782,{"v":7.38e-09,"d":"7.38E-09"},{"v":1.67E-7,"d":"1.67E-07"},"senescence-associated family protein (DUF581)."]
["AT4G11010","NDPK3",3652.3,0.67005,0.092532,7.2413,{"v":4.44e-13,"d":"4.44E-13"},{"v":1.03e-11,"d":"1.03E-11"},"full_name=nucleoside diphosphate kinase 3. nucleoside diphosphate kinase 3. nucleoside diphosphate kinase 3 (ndpk3), located to the inter-membrane space in mitochondria","AT3G47950","HA4",159.82,-1.7401,0.26761,-6.5022,{"v":7.91e-11,"d":"7.91E-11"},{"v":1.83e-09,"d":"1.83E-09"},"full_name=H(+)-ATPase 4. H[+]-ATPase 4. mutant has Slight reduction in root and shoot growth; Exaggerated defects in salt stress; Plasma Membrane H+ ATPase","AT4G33630","EX1",609.76,1.1262,0.1948,5.781,{"v":7.42e-09,"d":"7.42E-09"},{"v":1.68E-7,"d":"1.68E-07"},"full_name=EXECUTER1. UvrB/UvrC domain protein (DUF3506). Encodes one of the two plastid proteins EXECUTER (EX1, AT4G33630) and EX2 (AT1G27510). Mediates singlet oxygen induced programmed cell death."]
["AT5G18230","NOT3",1430.6,-0.82229,0.11365,-7.2356,{"v":4.64e-13,"d":"4.64E-13"},{"v":1.07e-11,"d":"1.07E-11"},"transcription regulator NOT2/NOT3/NOT5 family protein.","AT3G17820","GLN1.3",2515.5,-0.66052,0.10161,-6.5003,{"v":8.02e-11,"d":"8.02E-11"},{"v":1.85E-9,"d":"1.85E-09"},"full_name=glutamine synthetase 1.3. glutamine synthetase 1.3. encodes a cytosolic glutamine synthetase, the enzyme has low affinity with substrate ammonium","AT1G77000","SKP2B",213.82,1.395,0.24134,5.7804,{"v":7.45e-09,"d":"7.45E-09"},{"v":1.68E-7,"d":"1.68E-07"},"RNI-like superfamily protein. AtSKP2;2 is a homolog of human SKP2, the human F-box protein that recruits E2F1. Contains an F-box motif at the N-terminal region and a C-terminal Leu-rich repeat domain. Forms part of an E3-ubiquitin-ligase SCF (Skp1, cullin, F-box) complex and recruits phosphorylated AtE2Fc, a transcriptional factor that might play a role in cell division and during the transition from skotomorphogenesis to photomorphogenesis. AtSKP2;1 (At1g21410) and AtSKP2;2 (At1g77000) may be duplicated genes. AtSKP2b may also be involved in the degradation of KRP1/ICK1, a CDK inhibitor."]
["AT3G26180","CYP71B20",75.972,4.4421,0.61396,7.2352,{"v":4.65e-13,"d":"4.65E-13"},{"v":1.07e-11,"d":"1.07E-11"},"full_name=cytochrome P450, family 71, subfamily B, polypeptide 20. cytochrome P450, family 71, subfamily B, polypeptide 20. putative cytochrome P450","AT5G23190","CYP86B1",56.359,-5.3878,0.82898,-6.4993,{"v":8.07e-11,"d":"8.07E-11"},{"v":1.86E-9,"d":"1.86E-09"},"full_name=cytochrome P450, family 86, subfamily B, polypeptide 1. cytochrome P450, family 86, subfamily B, polypeptide 1. cytochrome P450 CYP86B1, nuclear gene for chloroplast product. CYP86B1 is a very long chain fatty acid hydroxylase specifically involved in polyester monomer biosynthesis during the course of plant development.","AT3G17840","RLK902",192.23,-1.4759,0.25536,-5.7798,{"v":7.48e-09,"d":"7.48E-09"},{"v":1.69e-07,"d":"1.69E-07"},"full_name=receptor-like kinase 902. receptor-like kinase 902. Encodes a receptor-like kinase found at the cell surface of various tissues. Its function remains unknown."]
["AT1G78820",null,110.49,2.7057,0.37413,7.2319,{"v":4.76e-13,"d":"4.76E-13"},{"v":1.1e-11,"d":"1.10E-11"},"D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein.","AT5G10120",null,246.51,-1.5169,0.2334,-6.499,8.09E-11,{"v":1.86E-9,"d":"1.86E-09"},"Ethylene insensitive 3 family protein.","AT3G29590","AT5MAT",232.61,-1.4031,0.24287,-5.7774,{"v":7.59e-09,"d":"7.59E-09"},{"v":1.71e-07,"d":"1.71E-07"},"HXXXD-type acyl-transferase family protein. At3g29590 (At5MAT) encodes a malonyl-CoA:anthocyanidin 5-O-glucoside-6-O-malonyltransferase that is coordinately expressed with a epistatic 5-O-anthocyanidin glucosyltransferase (At4g14090). The enzyme is involved in the malonylation of anthocyanins in Arabidopsis."]
["AT5G44610","MAP18",180.46,-2.428,0.33592,-7.2281,{"v":4.9e-13,"d":"4.90E-13"},{"v":1.13e-11,"d":"1.13E-11"},"full_name=microtubule-associated protein 18. microtubule-associated protein 18. Encodes a protein with seven repeated VEEKK motifs. RNAi and overexpression experiments suggest that the gene is not involved in cell division but might be consequential for cell shape of epidermal and cortical cells. The protein encoded by this gene binds to cortical microtubules and inhibits tubulin polymerization. Associates to the plasma membrane and interacts with calmodulin and phosphatidylinositol phosphates, indicating an involvement in cellular signal transduction. Expression is enhanced by abiotic and hormonal factors. Induced during senescence.","AT3G56370","IRK",174.68,1.7192,0.26466,6.496,{"v":8.25e-11,"d":"8.25E-11"},{"v":1.89e-09,"d":"1.89E-09"},"Leucine-rich repeat protein kinase family protein.","AT4G30370","IDF1",136.2,-2.2085,0.38239,-5.7755,{"v":7.67e-09,"d":"7.67E-09"},{"v":1.73E-7,"d":"1.73E-07"},"RING/U-box superfamily protein."]
["AT1G55920","SERAT2;1",176.59,1.7615,0.24392,7.2216,{"v":5.14e-13,"d":"5.14E-13"},{"v":1.18e-11,"d":"1.18E-11"},"full_name=serine acetyltransferase 2;1. serine acetyltransferase 2;1. Encodes a chloroplast/cytosol localized serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.","AT5G13400",null,85.441,2.7652,0.42588,6.493,{"v":8.42e-11,"d":"8.42E-11"},{"v":1.93e-09,"d":"1.93E-09"},"Major facilitator superfamily protein.","AT4G35630","PSAT",252.71,-1.2839,0.2228,-5.7627,{"v":8.28e-09,"d":"8.28E-09"},{"v":1.86E-7,"d":"1.86E-07"},"full_name=phosphoserine aminotransferase. phosphoserine aminotransferase. Encodes a phosphoserine aminotransferase which is involved in serine biosynthesis in the chloroplast which operates via the phosphorylated pathway."]
["AT5G66570","PSBO1",2582.3,-0.89511,0.124,-7.2188,{"v":5.24e-13,"d":"5.24E-13"},{"v":1.21e-11,"d":"1.21E-11"},"full_name=PS II oxygen-evolving complex 1. PS II oxygen-evolving complex 1. Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In <i>Arabidopsis thaliana</i> the PsbO proteins are encoded by two genes: <i>psbO1</i> and <i>psbO2</i>. PsbO1 is the major isoform in the wild-type. In plsp1-1 mutant plastids, the nonmature form of the protein localizes in the membrane.","AT3G07700","SIA1",393.81,-1.1143,0.17166,-6.4911,8.52E-11,{"v":1.95e-09,"d":"1.95E-09"},"Protein kinase superfamily protein.","AT1G36980",null,480.27,1.0095,0.17517,5.7626,{"v":8.28e-09,"d":"8.28E-09"},{"v":1.86E-7,"d":"1.86E-07"},"transmembrane 50A-like protein."]
["AT2G40330","PYL6",64.045,-3.8767,0.53713,-7.2174,{"v":5.3e-13,"d":"5.30E-13"},{"v":1.22e-11,"d":"1.22E-11"},"full_name=PYR1-like 6. PYR1-like 6. Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.","AT5G17330","GAD",88.685,2.4375,0.37569,6.4879,{"v":8.7e-11,"d":"8.70E-11"},{"v":1.99E-9,"d":"1.99E-09"},"full_name=glutamate decarboxylase. glutamate decarboxylase. Encodes one of two isoforms of glutamate decarboxylase.","AT2G14890","AGP9",899.44,-0.90526,0.15717,-5.7599,{"v":8.42e-09,"d":"8.42E-09"},{"v":1.89e-07,"d":"1.89E-07"},"full_name=arabinogalactan protein 9. arabinogalactan protein 9. putative proline-rich protein (At2g14890) mRNA, complete"]
["AT5G44120","CRA1",641900,-1.024,0.14193,-7.2147,{"v":5.41e-13,"d":"5.41E-13"},1.24E-11,"full_name=CRUCIFERINA. RmlC-like cupins superfamily protein. Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT5G35660",null,1155.6,-4.1421,0.63883,-6.4839,{"v":8.94e-11,"d":"8.94E-11"},{"v":2.04E-9,"d":"2.04E-09"},"Glycine-rich protein family.","AT1G51470","BGLU35",40.567,8.7814,1.5249,5.7588,{"v":8.47e-09,"d":"8.47E-09"},{"v":1.9e-07,"d":"1.90E-07"},"full_name=beta glucosidase 35. beta glucosidase 35. Encodes a myrosinase."]
["AT3G60160","ABCC9",91.665,-3.0592,0.4246,-7.2051,{"v":5.8e-13,"d":"5.80E-13"},1.33E-11,"full_name=ATP-binding cassette C9. multidrug resistance-associated protein 9. member of MRP subfamily","AT3G23190",null,56.582,9.7005,1.4964,6.4828,{"v":9.01e-11,"d":"9.01E-11"},{"v":2.05e-09,"d":"2.05E-09"},"HR-like lesion-inducing protein-like protein.","AT3G12930","DG238",304.03,-1.2047,0.20944,-5.7522,{"v":8.81e-09,"d":"8.81E-09"},{"v":1.97E-7,"d":"1.97E-07"},"Lojap-related protein."]
["AT5G52420","PRCE3",1241.5,-0.77263,0.10724,-7.2047,{"v":5.82e-13,"d":"5.82E-13"},1.33E-11,"transmembrane protein.","AT1G70490","ARFA1D",671.52,0.91284,0.14088,6.4798,{"v":9.19e-11,"d":"9.19E-11"},{"v":2.09E-9,"d":"2.09E-09"},"Ras-related small GTP-binding family protein. A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.","AT5G58430","EXO70B1",454.86,1.0973,0.19077,5.7522,{"v":8.81e-09,"d":"8.81E-09"},{"v":1.97E-7,"d":"1.97E-07"},"full_name=exocyst subunit exo70 family protein B1. exocyst subunit exo70 family protein B1. A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree."]
["AT5G58730","Mik",728.9,-1.2097,0.16792,-7.2041,{"v":5.84e-13,"d":"5.84E-13"},1.33E-11,"full_name=myo-inositol kinase. pfkB-like carbohydrate kinase family protein.","AT5G40510",null,34.477,4.918,0.75938,6.4764,{"v":9.4e-11,"d":"9.40E-11"},{"v":2.14e-09,"d":"2.14E-09"},"Sucrase/ferredoxin-like family protein.","AT3G47730","ABCA2",324.01,1.1811,0.20535,5.7519,{"v":8.82e-09,"d":"8.82E-09"},{"v":1.97E-7,"d":"1.97E-07"},"full_name=ATP-binding cassette A2. ATP-binding cassette A2. member of ATH subfamily"]
["AT1G75830","LCR67",558.44,1.5241,0.21163,7.2017,{"v":5.95e-13,"d":"5.95E-13"},1.36E-11,"full_name=low-molecular-weight cysteine-rich 67. low-molecular-weight cysteine-rich 67. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","AT1G65590","HEXO3",62.002,2.8058,0.43325,6.4761,{"v":9.41e-11,"d":"9.41E-11"},{"v":2.14e-09,"d":"2.14E-09"},"full_name=beta-hexosaminidase 3. beta-hexosaminidase 3. Encodes a protein with beta-hexosaminidase activity. Located on the plasma membrane.","AT5G16010",null,547.41,1.0198,0.17743,5.7479,{"v":9.04e-09,"d":"9.04E-09"},{"v":2.01e-07,"d":"2.01E-07"},"3-oxo-5-alpha-steroid 4-dehydrogenase family protein."]
["AT1G68470",null,225.52,-1.854,0.25754,-7.1987,{"v":6.08e-13,"d":"6.08E-13"},1.39E-11,"Exostosin family protein.","AT1G14830","DL1C",640.04,0.93421,0.14438,6.4705,{"v":9.77e-11,"d":"9.77E-11"},{"v":2.22e-09,"d":"2.22E-09"},"full_name=DYNAMIN-like 1C. DYNAMIN-like 1C. Encodes a dynamin-like protein that is involved in mitochondrial morphogenesis and pollen development. Protein is localized as speckles in the cytoplasm, partially co-localizes with mitochondrial markers, cell plate of dividing cells, and the tip of root hairs, root cap cells, and expanding part of trichoblasts.","AT5G61170",null,1407.6,-0.85803,0.1493,-5.7471,{"v":9.08e-09,"d":"9.08E-09"},{"v":2.02e-07,"d":"2.02E-07"},"Ribosomal protein S19e family protein."]
["AT4G11320","CP2",507.05,-1.3748,0.19129,-7.187,{"v":6.62e-13,"d":"6.62E-13"},{"v":1.51e-11,"d":"1.51E-11"},"Papain family cysteine protease.","AT2G02680",null,36.842,4.278,0.66153,6.4668,{"v":1E-10,"d":"1.00E-10"},{"v":2.27e-09,"d":"2.27E-09"},"Cysteine/Histidine-rich C1 domain family protein.","AT3G13200","EMB2769",1020.7,1.0485,0.1825,5.7455,{"v":9.17e-09,"d":"9.17E-09"},{"v":2.04E-7,"d":"2.04E-07"},"full_name=EMBRYO DEFECTIVE 2769. Cwf15 / Cwc15 cell cycle control family protein."]
["AT1G29120","UP9",652.25,1.0027,0.13953,7.1866,6.64E-13,{"v":1.51e-11,"d":"1.51E-11"},"Hydrolase-like protein family.","AT5G60120","TOE2",278.54,1.255,0.19424,6.461,1.04E-10,{"v":2.35e-09,"d":"2.35E-09"},"full_name=target of early activation tagged (EAT) 2. target of early activation tagged (EAT) 2.","AT5G35970",null,262.48,1.5348,0.26724,5.7434,{"v":9.28e-09,"d":"9.28E-09"},{"v":2.06e-07,"d":"2.06E-07"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein."]
["AT5G39160",null,218.07,-1.7746,0.24706,-7.1828,{"v":6.83e-13,"d":"6.83E-13"},{"v":1.55e-11,"d":"1.55E-11"},"RmlC-like cupins superfamily protein.","AT5G67260","CYCD3;2",858.06,1.1031,0.17078,6.459,1.05E-10,{"v":2.38e-09,"d":"2.38E-09"},"full_name=CYCLIN D3;2. CYCLIN D3;2. Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.","AT4G27560","UGT79B2",131.38,1.8216,0.31722,5.7425,{"v":9.33e-09,"d":"9.33E-09"},{"v":2.07e-07,"d":"2.07E-07"},"UDP-Glycosyltransferase superfamily protein."]
["AT3G44590","RPP2D",570.51,1.1112,0.15473,7.1815,{"v":6.9e-13,"d":"6.90E-13"},1.56E-11,"60S acidic ribosomal protein family.","AT5G10840","EMP1",1153.1,0.7879,0.122,6.458,1.06E-10,{"v":2.4E-9,"d":"2.40E-09"},"full_name=endomembrane protein 1. Endomembrane protein 70 protein family.","AT1G62710","BETA-VPE",994.32,0.94606,0.16476,5.7419,{"v":9.36e-09,"d":"9.36E-09"},{"v":2.07e-07,"d":"2.07E-07"},"full_name=beta vacuolar processing enzyme. beta vacuolar processing enzyme. Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins."]
["AT1G01120","KCS1",223.13,-1.8658,0.25984,-7.1807,{"v":6.94e-13,"d":"6.94E-13"},{"v":1.57e-11,"d":"1.57E-11"},"full_name=3-ketoacyl-CoA synthase 1. 3-ketoacyl-CoA synthase 1. Encodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis.","AT4G26400","BTL05",244.24,1.3558,0.2104,6.4439,1.16E-10,{"v":2.63e-09,"d":"2.63E-09"},"RING/U-box superfamily protein.","AT1G19565",null,38.109,3.6662,0.63869,5.7401,{"v":9.46E-9,"d":"9.46E-09"},{"v":2.09e-07,"d":"2.09E-07"},"hypothetical protein."]
["AT5G25770",null,487.95,-1.0836,0.15095,-7.1787,{"v":7.04e-13,"d":"7.04E-13"},{"v":1.59e-11,"d":"1.59E-11"},"alpha/beta-Hydrolases superfamily protein.","AT2G18450","SDH1-2",47.901,3.5851,0.55645,6.4428,{"v":1.17e-10,"d":"1.17E-10"},{"v":2.64E-9,"d":"2.64E-09"},"full_name=succinate dehydrogenase 1-2. succinate dehydrogenase 1-2. Nuclear encoded mitochondrial flavoprotein subunit of succinate dehydrogenase complex .","AT3G07310",null,490.31,-1.1652,0.20313,-5.7364,{"v":9.67e-09,"d":"9.67E-09"},{"v":2.14e-07,"d":"2.14E-07"},"phosphoserine aminotransferase, putative (DUF760)."]
["AT2G25737",null,374.23,-1.6548,0.23072,-7.1722,{"v":7.38e-13,"d":"7.38E-13"},{"v":1.67e-11,"d":"1.67E-11"},"Sulfite exporter TauE/SafE family protein.","AT5G49890","CLC-C",277.69,1.2619,0.19588,6.4419,{"v":1.18e-10,"d":"1.18E-10"},{"v":2.66e-09,"d":"2.66E-09"},"full_name=chloride channel C. chloride channel C. member of Anion channel protein family","AT1G07400","HSP17.8",41.492,3.3232,0.57963,5.7334,{"v":9.84e-09,"d":"9.84E-09"},{"v":2.17E-7,"d":"2.17E-07"},"HSP20-like chaperones superfamily protein."]
["AT1G03495",null,161.55,3.0825,0.42991,7.17,{"v":7.5e-13,"d":"7.50E-13"},{"v":1.69e-11,"d":"1.69E-11"},"HXXXD-type acyl-transferase family protein.","AT3G13790","ATBFRUCT1",55.567,9.6779,1.5031,6.4386,1.21E-10,{"v":2.71e-09,"d":"2.71E-09"},"Glycosyl hydrolases family 32 protein. Encodes a protein with invertase activity.","AT3G01590",null,367.71,1.4525,0.25338,5.7325,{"v":9.9e-09,"d":"9.90E-09"},{"v":2.18e-07,"d":"2.18E-07"},"Galactose mutarotase-like superfamily protein."]
["AT5G42100","BG_PPAP",743.35,-1.02,0.14227,-7.1692,{"v":7.55e-13,"d":"7.55E-13"},{"v":1.7e-11,"d":"1.70E-11"},"full_name=beta-1,3-glucanase_putative. beta-1,3-glucanase. encodes a plasmodesmal (Pd)-associated membrane protein involved in plasmodesmal callose degradation, i.e. beta-1,3-glucanase (EC 3.2.1.39), and functions in the gating of Pd","AT1G48330",null,58.631,2.8296,0.43963,6.4364,{"v":1.22e-10,"d":"1.22E-10"},{"v":2.75e-09,"d":"2.75E-09"},"SsrA-binding protein.","AT1G64040","TOPP3",518.52,0.97409,0.17005,5.7284,{"v":1.01e-08,"d":"1.01E-08"},{"v":2.23E-7,"d":"2.23E-07"},"full_name=type one serine/threonine protein phosphatase 3. type one serine/threonine protein phosphatase 3. Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers."]
["AT3G04260","PTAC3",1272.1,0.90521,0.12633,7.1654,{"v":7.75e-13,"d":"7.75E-13"},{"v":1.75e-11,"d":"1.75E-11"},"full_name=plastid transcriptionally active 3. plastid transcriptionally active 3.","AT1G22930",null,863.11,-0.89781,0.1395,-6.4361,{"v":1.23e-10,"d":"1.23E-10"},{"v":2.75e-09,"d":"2.75E-09"},"T-complex protein 11.","AT3G20440","EMB2729",191.11,-1.4395,0.25131,-5.7281,{"v":1.02E-8,"d":"1.02E-08"},{"v":2.23E-7,"d":"2.23E-07"},"full_name=EMBRYO DEFECTIVE 2729. Alpha amylase family protein. Encodes BE1, a putative glycoside hydrolase. Involved in organogenesis and somatic embryogenesis by regulating carbohydrate metabolism. Mutation in BE1 has pleotrophic effect on the whole plant development."]
["AT5G58770","cPT4",64.577,-3.3447,0.46698,-7.1624,{"v":7.93e-13,"d":"7.93E-13"},{"v":1.78e-11,"d":"1.78E-11"},"full_name=cis-prenyltransferase 4. Undecaprenyl pyrophosphate synthetase family protein.","AT3G51820","G4",1158.7,0.79532,0.12363,6.433,{"v":1.25e-10,"d":"1.25E-10"},{"v":2.8e-09,"d":"2.80E-09"},"UbiA prenyltransferase family protein. Encodes a protein with chlorophyll synthase activity. This enzyme has been shown to perform the esterification of chlorophyllide (a and b), the last step of chlorophyll biosynthesis. Although it can use either geranylgeranyl pyrophosphate (GGPP) or phytyl pyrophosphate (PhyPP) as substrates, the esterification reaction was faster with GGPP than with PhyPP.","AT1G10522","PRIN2",261.53,-1.3828,0.24146,-5.7267,{"v":1.02E-8,"d":"1.02E-08"},{"v":2.25e-07,"d":"2.25E-07"},"full_name=PLASTID REDOX INSENSITIVE 2. Serine/Threonine-kinase. Encodes PRIN2 (plastid redox insensitive 2). PRIN2 mutants are impaired in PEP (plastid-encoded RNA polymerase) activity and high light-dependent plastid redox signalling to the nucleus."]
["AT3G22310","PMH1",1502.4,0.76038,0.10619,7.1604,{"v":8.04e-13,"d":"8.04E-13"},{"v":1.81e-11,"d":"1.81E-11"},"full_name=putative mitochondrial RNA helicase 1. putative mitochondrial RNA helicase 1. Sequence similarity ot DEAD-box RNA helicases. Binds RNA and DNA. Involved in drought, salt and cold stress responses.","AT3G48690","CXE12",2693.6,-1.1565,0.1798,-6.432,1.26E-10,{"v":2.82e-09,"d":"2.82E-09"},"alpha/beta-Hydrolases superfamily protein. Encodes a protein with carboxylesterase whose activity was tested using both pNA and 2,4-D-methyl.","AT5G08260","scpl35",2839.7,-0.95349,0.1665,-5.7266,{"v":1.02E-8,"d":"1.02E-08"},{"v":2.25e-07,"d":"2.25E-07"},"full_name=serine carboxypeptidase-like 35. serine carboxypeptidase-like 35."]
["AT3G26380","APSE",2053.9,-0.69499,0.097101,-7.1574,{"v":8.22e-13,"d":"8.22E-13"},{"v":1.84e-11,"d":"1.84E-11"},"Melibiase family protein.","AT1G09850","XBCP3",118.03,2.39,0.37159,6.4319,1.26E-10,{"v":2.82e-09,"d":"2.82E-09"},"full_name=xylem bark cysteine peptidase 3. xylem bark cysteine peptidase 3. Arabidopsis thaliana papain-like cysteine peptidase","AT5G03555","NCS1",130.59,1.6891,0.29502,5.7254,{"v":1.03E-8,"d":"1.03E-08"},{"v":2.26e-07,"d":"2.26E-07"},"full_name=nucleobase cation symporter 1. permease, cytosine/purines, uracil, thiamine, allantoin family protein. Encodes PLUTO (plastidic nucleobase transporter), a member of the Nucleobase:Cation-Symporter1 protein family, capable of transporting purine and pyrimidine nucleobases."]
["AT5G09300",null,670.08,-0.98431,0.13763,-7.1519,{"v":8.56e-13,"d":"8.56E-13"},{"v":1.92e-11,"d":"1.92E-11"},"Thiamin diphosphate-binding fold (THDP-binding) superfamily protein.","AT5G02244",null,54.878,9.6542,1.5034,6.4215,1.35E-10,{"v":3.01e-09,"d":"3.01E-09"},"pseudogene. Pseudogene of AT3G57870; AHUS5 (SUMO CONJUGATION ENZYME 1); ubiquitin-protein ligase","AT2G25625","CV",92.288,2.606,0.45527,5.724,{"v":1.04E-8,"d":"1.04E-08"},{"v":2.28E-7,"d":"2.28E-07"},"histone deacetylase-like protein."]
["AT1G15100","RHA2A",307.34,-1.3742,0.19225,-7.1479,{"v":8.81e-13,"d":"8.81E-13"},1.97E-11,"full_name=RING-H2 finger A2A. RING-H2 finger A2A. Encodes a putative RING-H2 finger protein RHA2a.","AT4G37520",null,54.568,-3.6415,0.56728,-6.4193,{"v":1.37e-10,"d":"1.37E-10"},{"v":3.05E-9,"d":"3.05E-09"},"Peroxidase superfamily protein.","AT1G04680",null,196.33,-1.391,0.24312,-5.7213,{"v":1.06e-08,"d":"1.06E-08"},{"v":2.31e-07,"d":"2.31E-07"},"Pectin lyase-like superfamily protein."]
["AT1G22370","UGT85A5",332.58,1.3424,0.18787,7.1451,{"v":8.99e-13,"d":"8.99E-13"},2.01E-11,"full_name=UDP-glucosyl transferase 85A5. UDP-glucosyl transferase 85A5.","AT1G44350","ILL6",282.93,-1.2708,0.19809,-6.4152,1.41E-10,{"v":3.13e-09,"d":"3.13E-09"},"full_name=IAA-leucine resistant (ILR)-like gene 6. IAA-amino acid hydrolase ILR1-like 6. encodes a protein similar to IAA amino acid conjugate hydrolase.","AT4G29780",null,99.567,1.9269,0.33702,5.7173,{"v":1.08e-08,"d":"1.08E-08"},{"v":2.36E-7,"d":"2.36E-07"},"nuclease."]
["AT2G27360",null,418.13,-1.1633,0.16283,-7.1441,{"v":9.06e-13,"d":"9.06E-13"},{"v":2.02e-11,"d":"2.02E-11"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT5G07360",null,212.02,-1.5421,0.2405,-6.4121,{"v":1.44e-10,"d":"1.44E-10"},{"v":3.19e-09,"d":"3.19E-09"},"Amidase family protein.","AT5G66730","IDD1",432.93,1.0622,0.18584,5.7159,{"v":1.09E-8,"d":"1.09E-08"},{"v":2.38e-07,"d":"2.38E-07"},"full_name=INDETERMINATE DOMAIN 1. C2H2-like zinc finger protein."]
["AT2G39570","ACR9",586.88,-1.3318,0.18649,-7.141,{"v":9.27e-13,"d":"9.27E-13"},2.07E-11,"full_name=ACT domain repeats 9. ACT domain-containing protein. Encodes a ACT domain-containing protein. The ACT domain, named after bacterial aspartate kinase, chorismate mutase and TyrA (prephenate dehydrogenase), is a regulatory domain that serves as an amino acid-binding site in feedback-regulated amino acid metabolic enzymes.","AT4G30200","VEL1",551.05,1.0646,0.16623,6.4043,1.51E-10,{"v":3.36E-9,"d":"3.36E-09"},"full_name=vernalization5/VIN3-like 1. vernalization5/VIN3-like protein. Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.","AT3G27170","CLC-B",36.562,5.1104,0.89418,5.7153,{"v":1.1e-08,"d":"1.10E-08"},{"v":2.39e-07,"d":"2.39E-07"},"full_name=chloride channel B. chloride channel B. member of Anion channel protein family"]
["AT1G60970",null,389.98,-1.398,0.19601,-7.1321,{"v":9.89e-13,"d":"9.89E-13"},{"v":2.2e-11,"d":"2.20E-11"},"SNARE-like superfamily protein.","AT2G01590","CRR3",81.852,2.5927,0.40568,6.3911,1.65E-10,{"v":3.66e-09,"d":"3.66E-09"},"full_name=CHLORORESPIRATORY REDUCTION 3. chlororespiratory reduction 3. Likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located in the membrane fraction of chloroplast. Mutant has impaired NAD(P)H dehydrogenase activity.","AT2G31270","CDT1A",82.744,-2.194,0.38408,-5.7124,{"v":1.11E-8,"d":"1.11E-08"},{"v":2.42e-07,"d":"2.42E-07"},"full_name=homolog of yeast CDT1 A. CDT1-like protein A. Encodes a cyclin-dependent protein kinase. Involved in nuclear DNA replication and plastid division. Located in nucleus and chloroplast."]
["AT5G66580",null,210.36,-1.7622,0.24708,-7.132,{"v":9.89e-13,"d":"9.89E-13"},{"v":2.2e-11,"d":"2.20E-11"},"hypothetical protein.","AT3G06880",null,95.531,2.3535,0.36858,6.3853,1.71E-10,{"v":3.79e-09,"d":"3.79E-09"},"Transducin/WD40 repeat-like superfamily protein.","AT2G39310","JAL22",217.84,1.4446,0.25305,5.7089,{"v":1.14E-8,"d":"1.14E-08"},{"v":2.47e-07,"d":"2.47E-07"},"full_name=jacalin-related lectin 22. jacalin-related lectin 22."]
["AT3G46320",null,197.54,1.7058,0.23924,7.1303,{"v":1e-12,"d":"1.00E-12"},2.23E-11,"Histone superfamily protein.","AT5G47880","ERF1-1",1837.2,-0.8914,0.13981,-6.3759,{"v":1.82e-10,"d":"1.82E-10"},{"v":4.03e-09,"d":"4.03E-09"},"full_name=eukaryotic release factor 1-1. eukaryotic release factor 1-1. Encodes a eukaryotic release factor 1 homolog. Cosuppression of the gene's expression results affects cell elongation of the inflorescence stem, specifically the internodes, and radial cell division. Expression of the protein is primarily observed in the vascular system and in actively growing and elongating zones.","AT4G26760","MAP65-2",542.9,-0.98305,0.17227,-5.7066,{"v":1.15E-8,"d":"1.15E-08"},{"v":2.5e-07,"d":"2.50E-07"},"full_name=microtubule-associated protein 65-2. microtubule-associated protein 65-2."]
["AT2G01490","PAHX",664.07,1.163,0.16315,7.1284,{"v":1.02e-12,"d":"1.02E-12"},2.25E-11,"full_name=phytanoyl-CoA 2-hydroxylase. phytanoyl-CoA dioxygenase (PhyH) family protein. Encodes a phytanoyl-CoA 2-hydroxylase (PAHX).","AT3G54820","PIP2;5",407.93,-1.3923,0.21837,-6.3757,{"v":1.82e-10,"d":"1.82E-10"},{"v":4.03e-09,"d":"4.03E-09"},"full_name=plasma membrane intrinsic protein 2;5. plasma membrane intrinsic protein 2;5.","AT3G62310",null,834.51,0.88136,0.15445,5.7064,{"v":1.15E-8,"d":"1.15E-08"},{"v":2.5e-07,"d":"2.50E-07"},"RNA helicase family protein."]
["AT2G18193",null,66.469,3.2824,0.46051,7.1276,{"v":1.02e-12,"d":"1.02E-12"},{"v":2.26e-11,"d":"2.26E-11"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT3G14840","LIK1",379.63,1.1146,0.17495,6.3706,1.88E-10,{"v":4.16e-09,"d":"4.16E-09"},"Leucine-rich repeat transmembrane protein kinase. Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception.","AT5G20380","PHT4;5",387.45,1.0877,0.19067,5.7047,{"v":1.17e-08,"d":"1.17E-08"},{"v":2.52e-07,"d":"2.52E-07"},"full_name=phosphate transporter 4;5. phosphate transporter 4;5. Encodes an inorganic phosphate transporter (PHT4;5)."]
["AT1G15670","KMD2",700.82,1.0304,0.14459,7.1266,{"v":1.03e-12,"d":"1.03E-12"},{"v":2.28e-11,"d":"2.28E-11"},"Galactose oxidase/kelch repeat superfamily protein. Encodes a member of a family of F-box proteins, called the KISS ME DEADLY (KMD) family, that targets type-B ARR proteins for degradation and is involved in the negative regulation of the cytokinin response. Also named as KFB1, a member of a group of Kelch repeat F-box proteins that negatively regulate phenylpropanoid biosynthesis by targeting the phenypropanoid biosynthesis enzyme phenylalanine ammonia-lyase.","AT2G22510",null,77.67,-6.8595,1.0772,-6.3677,{"v":1.92e-10,"d":"1.92E-10"},{"v":4.23e-09,"d":"4.23E-09"},"hydroxyproline-rich glycoprotein family protein.","AT4G29380","VPS15",528.18,1.1175,0.19594,5.7033,{"v":1.17e-08,"d":"1.17E-08"},{"v":2.54e-07,"d":"2.54E-07"},"full_name=vacuolar protein sorting 15. protein kinase family protein / WD-40 repeat family protein. The gene encodes phosphatidylinositol 3- kinase involved in the development and germination of pollen through the biosynthesis of phosphatidylinositol 3-phosphate (PI3P)."]
["AT3G12520","SULTR4;2",275.34,1.8466,0.25921,7.1239,1.05E-12,{"v":2.32e-11,"d":"2.32E-11"},"full_name=sulfate transporter 4;2. sulfate transporter 4;2. Encodes a sulfate transporter that in induced under sulfate limitation.","AT1G49600","RBP47A",2793.8,0.72532,0.11399,6.3632,{"v":1.98e-10,"d":"1.98E-10"},{"v":4.35e-09,"d":"4.35E-09"},"full_name=RNA-binding protein 47A. RNA-binding protein 47A.","AT1G11650","RBP45B",2025.4,0.81643,0.14355,5.6876,{"v":1.29E-8,"d":"1.29E-08"},{"v":2.78e-07,"d":"2.78E-07"},"RNA-binding (RRM/RBD/RNP motifs) family protein. Encodes an RNA binding protein with three RNA recognition motifs."]
["AT5G65660",null,805.15,-0.9449,0.13274,-7.1185,1.09E-12,{"v":2.41e-11,"d":"2.41E-11"},"hydroxyproline-rich glycoprotein family protein.","AT2G21160",null,1908.2,0.6673,0.10499,6.3557,{"v":2.07e-10,"d":"2.07E-10"},{"v":4.57e-09,"d":"4.57E-09"},"Translocon-associated protein (TRAP), alpha subunit.","AT1G65090",null,190.29,1.6013,0.28168,5.6848,{"v":1.31E-8,"d":"1.31E-08"},{"v":2.83e-07,"d":"2.83E-07"},"nucleolin."]
["AT4G29510","PRMT11",1261.2,0.80028,0.11247,7.1157,{"v":1.11e-12,"d":"1.11E-12"},{"v":2.46e-11,"d":"2.46E-11"},"full_name=arginine methyltransferase 11. arginine methyltransferase 11. Has arginine N-methyltransferase activity. Modifies AtMBD7.","AT1G62500","DEG27",162.24,-2.0266,0.31892,-6.3545,2.09E-10,{"v":4.6e-09,"d":"4.60E-09"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT4G14620",null,133.46,-1.7195,0.30294,-5.676,{"v":1.38e-08,"d":"1.38E-08"},{"v":2.97e-07,"d":"2.97E-07"},"hypothetical protein (DUF506)."]
["AT4G24220","VEP1",6835.5,-0.5441,0.076534,-7.1092,{"v":1.17e-12,"d":"1.17E-12"},{"v":2.57e-11,"d":"2.57E-11"},"full_name=VEIN PATTERNING 1. NAD(P)-binding Rossmann-fold superfamily protein. encodes a progesterone-5beta-reductase-like protein. It has enone reductase activity against a wide range of substrates, including 3-oxo-&#916;-4,5-steroids in vitro. The in vivo substrates and product of this enzyme have not yet been elucidated but it is likely to participate in steroid metabolism. The protein contains a mammalian death domain involved in programmed cell death. The gene is expressed in the vascular system and mutants carrying a dominant mutation in the gene have defective vascular patterning. VEP1 gene expression is induced specifically by wounding.","AT5G16970","AER",961.21,-0.90494,0.14246,-6.3522,{"v":2.12e-10,"d":"2.12E-10"},{"v":4.66E-9,"d":"4.66E-09"},"full_name=alkenal reductase. alkenal reductase. encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls","AT1G17550","HAB2",721.38,0.95503,0.16827,5.6754,{"v":1.38e-08,"d":"1.38E-08"},{"v":2.98e-07,"d":"2.98E-07"},"full_name=homology to ABI2. homology to ABI2. Protein Phosphatase 2C"]
["AT3G61820",null,947.56,1.3074,0.18399,7.1056,{"v":1.2e-12,"d":"1.20E-12"},{"v":2.64e-11,"d":"2.64E-11"},"Eukaryotic aspartyl protease family protein.","AT5G57655",null,1881.3,-0.683,0.10761,-6.3469,{"v":2.2e-10,"d":"2.20E-10"},{"v":4.81e-09,"d":"4.81E-09"},"xylose isomerase family protein.","ATMG00080","rpl16",36.271,3.9481,0.69569,5.6751,{"v":1.39E-8,"d":"1.39E-08"},{"v":2.98e-07,"d":"2.98E-07"}]
["AT1G35680","RPL21C",1288.1,0.90914,0.12795,7.1052,{"v":1.2e-12,"d":"1.20E-12"},{"v":2.64e-11,"d":"2.64E-11"},"full_name=chloroplast ribosomal protein L21. Ribosomal protein L21. Encodes a chloroplast ribosomal protein L21 that is required for chloroplast development and embryogenesis.","AT5G43260",null,169.74,-1.6035,0.25264,-6.3468,{"v":2.2e-10,"d":"2.20E-10"},{"v":4.81e-09,"d":"4.81E-09"},"chaperone protein dnaJ-like protein.","AT3G16030","CES101",132.85,1.7629,0.31078,5.6725,{"v":1.41e-08,"d":"1.41E-08"},{"v":3.02e-07,"d":"3.02E-07"},"full_name=CALLUS EXPRESSION OF RBCS 101. lectin protein kinase family protein."]
["AT2G31360","ADS2",3171.8,-0.61216,0.086173,-7.1038,{"v":1.21e-12,"d":"1.21E-12"},{"v":2.67e-11,"d":"2.67E-11"},"full_name=16:0delta9 desaturase 2. 16:0delta9 desaturase 2. Encodes a protein homologous to delta 9 acyl-lipid desaturases of cyanobacteria and acyl-CoA desaturases of yeast and mammals. expression up-regulated by cold temperature. It is involved in the synthesis of the 24:1n-9 and 26:1n-9 components of seed lipids, sphingolipids and the membrane phospholipids phosphatidylserine (PS), and phosphatidylethanolamine (PE).","AT1G43910",null,90.297,2.2417,0.35321,6.3467,{"v":2.2e-10,"d":"2.20E-10"},{"v":4.81e-09,"d":"4.81E-09"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT5G57550","XTH25",160.32,1.8153,0.32017,5.6696,{"v":1.43e-08,"d":"1.43E-08"},{"v":3.07e-07,"d":"3.07E-07"},"full_name=xyloglucan endotransglucosylase/hydrolase 25. xyloglucan endotransglucosylase/hydrolase 25. xyloglucan endotransglycosylase-related protein (XTR3)"]
["AT3G30180","BR6OX2",172.28,-1.7981,0.25319,-7.1015,1.23E-12,{"v":2.71e-11,"d":"2.71E-11"},"full_name=brassinosteroid-6-oxidase 2. brassinosteroid-6-oxidase 2. Encodes a cytochrome p450 enzyme that catalyzes the last reaction in the production of brassinolide. It is capable of converting 6-deoxocastasterone into castasterone, a C-6 oxidation, as well as the further conversion of castasterone into brassinolide by a Baeyer-Villinger oxidation reaction at C-6, resulting in the formation of an unusual seven-membered lactone ring. The enzyme possesses high affinity for both C28- and C27-Brassinosteroids. The expression of the gene using a CYP85A2 promoter:LUC fusion construct was shown to be under circadian and light control.","AT5G58070","TIL",2777.4,-0.94423,0.14879,-6.3459,{"v":2.21e-10,"d":"2.21E-10"},{"v":4.83e-09,"d":"4.83E-09"},"full_name=temperature-induced lipocalin. temperature-induced lipocalin. Encodes a temperature-induced lipocalin TIL1. Involved in thermotolerance. Peripherally associated with plasma membrane.","AT1G42470","ATNPC1 - 1",408.11,1.0852,0.1916,5.664,{"v":1.48E-8,"d":"1.48E-08"},{"v":3.17e-07,"d":"3.17E-07"},"Patched family protein."]
["AT5G51490",null,81.245,-2.7378,0.38555,-7.1012,1.24E-12,{"v":2.71e-11,"d":"2.71E-11"},"Plant invertase/pectin methylesterase inhibitor superfamily.","AT4G17530","RAB1C",714.63,-0.96645,0.15237,-6.3429,2.25E-10,{"v":4.92e-09,"d":"4.92E-09"},"full_name=RAB GTPase homolog 1C. RAB GTPase homolog 1C. AtRabD2c encodes a Rab GTPase, which plays important roles in pollen development, germination and tube elongation.","AT3G62770","AtATG18a",261.14,1.2444,0.21973,5.6633,{"v":1.48E-8,"d":"1.48E-08"},{"v":3.18e-07,"d":"3.18E-07"},"full_name=autophagy 18a. Transducin/WD40 repeat-like superfamily protein. Required for autophagosome formation during nutrient deprivation and senescence."]
["AT5G39190","GER2",228.11,-1.7382,0.24488,-7.0984,{"v":1.26e-12,"d":"1.26E-12"},2.76E-11,"full_name=germin-like protein 2. germin-like protein 2. germin-like protein (GLP2a)","AT2G42000","AtMT4a",82.792,-9.3863,1.4812,-6.337,{"v":2.34e-10,"d":"2.34E-10"},{"v":5.11e-09,"d":"5.11E-09"},"full_name=Arabidopsis thaliana metallothionein 4a. plant EC metallothionein family protein. AtMT4a is a member of Type 4 metallothionein (MT) genes. It is involved in the early develoment of the embryo and in the accumulation of metal ions especially Zn in the seeds.","AT3G18680","PUMPKIN",1027.3,-0.84766,0.1497,-5.6623,{"v":1.49e-08,"d":"1.49E-08"},{"v":3.19e-07,"d":"3.19E-07"},"Amino acid kinase family protein."]
["AT1G15740",null,784.87,-0.96673,0.13622,-7.0966,1.28E-12,{"v":2.8E-11,"d":"2.80E-11"},"Leucine-rich repeat family protein.","AT3G23820","GAE6",205.87,1.4762,0.23308,6.3336,{"v":2.4E-10,"d":"2.40E-10"},{"v":5.22e-09,"d":"5.22E-09"},"full_name=UDP-D-glucuronate 4-epimerase 6. UDP-D-glucuronate 4-epimerase 6. UDP-D-glucuronate 4-epimerase","AT4G37460","SRFR1",658.38,0.89727,0.15857,5.6586,{"v":1.53e-08,"d":"1.53E-08"},{"v":3.26e-07,"d":"3.26E-07"},"full_name=SUPPRESSOR OF RPS4-RLD 1. Tetratricopeptide repeat (TPR)-like superfamily protein. Encodes a tetratricopeptide repeat domain containing protein that shows sequence similarity to those of transcriptional repressors in other organisms. Involved in mediating effector-triggered immunity."]
["AT5G05600","JOX2",1830.2,-0.99513,0.14025,-7.0953,1.29E-12,2.82E-11,"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT4G26050","PIRL8",74.527,-3.0845,0.48709,-6.3325,{"v":2.41e-10,"d":"2.41E-10"},{"v":5.25e-09,"d":"5.25E-09"},"full_name=plant intracellular ras group-related LRR 8. plant intracellular ras group-related LRR 8. Encodes PIRL8, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.","AT3G63060","EDL3",53.262,2.8745,0.50861,5.6517,{"v":1.59E-8,"d":"1.59E-08"},{"v":3.39E-7,"d":"3.39E-07"},"full_name=EID1-like 3. EID1-like 3. EDL3 is an F-box protein involved that mediated the regulation of abscisic acid signalling."]
["AT4G23010","UTR2",761.49,-1.186,0.16721,-7.0929,{"v":1.31e-12,"d":"1.31E-12"},{"v":2.87e-11,"d":"2.87E-11"},"full_name=UDP-galactose transporter 2. UDP-galactose transporter 2.","AT1G68380",null,58.597,-3.5625,0.5627,-6.3311,{"v":2.43e-10,"d":"2.43E-10"},{"v":5.29e-09,"d":"5.29E-09"},"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein.","AT2G31960","GSL03",1223.8,0.7905,0.13988,5.6513,{"v":1.59E-8,"d":"1.59E-08"},{"v":3.39E-7,"d":"3.39E-07"},"full_name=glucan synthase-like 3. glucan synthase-like 3. encodes a protein similar to callose synthase"]
["AT2G36145",null,638.01,-1.2661,0.17852,-7.0923,1.32E-12,{"v":2.87e-11,"d":"2.87E-11"},"hypothetical protein.","AT5G42860","CC2",76.692,2.3164,0.3659,6.3306,{"v":2.44e-10,"d":"2.44E-10"},{"v":5.3e-09,"d":"5.30E-09"},"late embryogenesis abundant protein, group 2.","AT4G12600",null,1091.9,-0.90593,0.16032,-5.6508,{"v":1.6e-08,"d":"1.60E-08"},{"v":3.4e-07,"d":"3.40E-07"},"Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein."]
["AT2G29190","PUM2",1066.8,1.0507,0.14818,7.0908,1.33E-12,{"v":2.9E-11,"d":"2.90E-11"},"full_name=pumilio 2. pumilio 2. Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.","AT5G52420","PRCE3",486.76,-1.3771,0.2177,-6.326,{"v":2.52e-10,"d":"2.52E-10"},{"v":5.46e-09,"d":"5.46E-09"},"transmembrane protein.","AT3G10020",null,1344.3,0.9391,0.16619,5.6507,{"v":1.6e-08,"d":"1.60E-08"},{"v":3.4e-07,"d":"3.40E-07"},"plant/protein."]
["AT2G27190","PAP12",685.91,0.98527,0.13897,7.0899,{"v":1.34e-12,"d":"1.34E-12"},2.92E-11,"full_name=purple acid phosphatase 12. purple acid phosphatase 12. Encodes a root-secreted purple acid phosphatase involved in extracellular phosphate-scavenging.","AT5G49460","ACLB-2",371.09,1.0828,0.1715,6.3136,{"v":2.73e-10,"d":"2.73E-10"},{"v":5.9e-09,"d":"5.90E-09"},"full_name=ATP citrate lyase subunit B 2. ATP citrate lyase subunit B 2. One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL)","AT1G58983",null,1506.8,-0.79216,0.14022,-5.6493,{"v":1.61e-08,"d":"1.61E-08"},{"v":3.42e-07,"d":"3.42E-07"},"Ribosomal protein S5 family protein."]
["AT1G43560","ty2",228.93,1.5591,0.21998,7.0874,1.37E-12,{"v":2.97e-11,"d":"2.97E-11"},"full_name=thioredoxin Y2. thioredoxin Y2.","AT4G26200","ACS7",50.276,-3.9779,0.6302,-6.3122,{"v":2.75e-10,"d":"2.75E-10"},{"v":5.95e-09,"d":"5.95E-09"},"full_name=1-amino-cyclopropane-1-carboxylate synthase 7. 1-amino-cyclopropane-1-carboxylate synthase 7. Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.","AT1G58684",null,1506.8,-0.79216,0.14022,-5.6493,{"v":1.61e-08,"d":"1.61E-08"},{"v":3.42e-07,"d":"3.42E-07"},"Ribosomal protein S5 family protein."]
["AT3G06530",null,1021.1,0.81426,0.11491,7.0861,1.38E-12,{"v":2.99e-11,"d":"2.99E-11"},"ARM repeat superfamily protein.","AT1G29680",null,52.088,-4.6366,0.73468,-6.3111,{"v":2.77e-10,"d":"2.77E-10"},{"v":5.99e-09,"d":"5.99E-09"},"histone acetyltransferase (DUF1264).","AT1G59359",null,1506.7,-0.79264,0.14033,-5.6483,{"v":1.62e-08,"d":"1.62E-08"},{"v":3.43e-07,"d":"3.43E-07"},"Ribosomal protein S5 family protein."]
["AT1G25350","OVA9",1675.8,-0.76161,0.10751,-7.0839,{"v":1.4e-12,"d":"1.40E-12"},3.04E-11,"full_name=ovule abortion 9. glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS.","AT4G18030",null,1054.6,0.79891,0.12664,6.3086,{"v":2.82e-10,"d":"2.82E-10"},{"v":6.08e-09,"d":"6.08E-09"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT1G23080","PIN7",277.67,-1.1913,0.21098,-5.6465,{"v":1.64e-08,"d":"1.64E-08"},{"v":3.46E-7,"d":"3.46E-07"},"full_name=PIN-FORMED 7. Auxin efflux carrier family protein. Encodes a novel component of auxin efflux that is located apically in the basal cell and is involved during embryogenesis in setting up the apical-basal axis in the embryo. It is also involved in pattern specification during root development. In roots, it is expressed at lateral and basal membranes of provascular cells in the meristem and elongation zone, whereas in the columella cells it coincides with the PIN3 domain. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. PINs are directly involved of in catalyzing cellular auxin efflux."]
["AT2G35470",null,101.59,-2.4782,0.34993,-7.0818,1.42E-12,3.08E-11,"ribosome maturation factor.","AT5G43760","KCS20",357.79,1.2476,0.1978,6.3074,2.84E-10,{"v":6.12e-09,"d":"6.12E-09"},"full_name=3-ketoacyl-CoA synthase 20. 3-ketoacyl-CoA synthase 20. Encodes KCS20, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT1G27330",null,239.25,-1.2848,0.22772,-5.6419,{"v":1.68e-08,"d":"1.68E-08"},{"v":3.55e-07,"d":"3.55E-07"},"Ribosome associated membrane protein RAMP4."]
["AT5G02960",null,6616,0.60756,0.085836,7.0781,1.46E-12,{"v":3.16e-11,"d":"3.16E-11"},"Ribosomal protein S12/S23 family protein.","AT3G13940",null,542.13,-0.97297,0.15434,-6.3042,{"v":2.9e-10,"d":"2.90E-10"},{"v":6.24E-9,"d":"6.24E-09"},"DNA binding / DNA-directed RNA polymerase.","AT1G48840",null,405.14,1.0804,0.19159,5.6392,{"v":1.71e-08,"d":"1.71E-08"},{"v":3.6e-07,"d":"3.60E-07"},"heat-inducible transcription repressor (DUF639)."]
["AT3G13080","ABCC3",516.91,1.2287,0.17381,7.0693,1.56E-12,{"v":3.36e-11,"d":"3.36E-11"},"full_name=ATP-binding cassette C3. multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.","AT2G15090","KCS8",402.15,1.586,0.25163,6.3029,{"v":2.92e-10,"d":"2.92E-10"},{"v":6.28e-09,"d":"6.28E-09"},"full_name=3-ketoacyl-CoA synthase 8. 3-ketoacyl-CoA synthase 8. Encodes KCS8, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT3G07090",null,457.37,1.0739,0.19044,5.6391,{"v":1.71e-08,"d":"1.71E-08"},{"v":3.6e-07,"d":"3.60E-07"},"PPPDE putative thiol peptidase family protein."]
["AT5G03140","LECRK-VIII.2",169.92,-2.0791,0.29419,-7.0674,{"v":1.58e-12,"d":"1.58E-12"},{"v":3.41e-11,"d":"3.41E-11"},"Concanavalin A-like lectin protein kinase family protein.","AT3G60330","HA7",67.933,2.965,0.47043,6.3028,{"v":2.92e-10,"d":"2.92E-10"},{"v":6.28e-09,"d":"6.28E-09"},"full_name=H(+)-ATPase 7. H[+]-ATPase 7.","AT1G71950","SPI-1",403.44,1.3917,0.24734,5.6266,{"v":1.84e-08,"d":"1.84E-08"},{"v":3.87e-07,"d":"3.87E-07"},"Proteinase inhibitor, propeptide."]
["AT4G26460",null,70.718,-3.1116,0.4405,-7.0637,1.62E-12,{"v":3.49e-11,"d":"3.49E-11"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT5G47110","LIL3:2",2808.4,0.65313,0.10363,6.3023,{"v":2.93e-10,"d":"2.93E-10"},{"v":6.29e-09,"d":"6.29E-09"},"Chlorophyll A-B binding family protein.","AT2G16060","HB1",468.79,1.5485,0.27541,5.6226,{"v":1.88E-8,"d":"1.88E-08"},{"v":3.96E-7,"d":"3.96E-07"},"full_name=hemoglobin 1. hemoglobin 1. Encodes a class 1 nonsymbiotic hemoglobin induced by low oxygen levels with very high oxygen affinity. It is not likely to be a hemoglobin transporter because of its extremely high affinity for oxygen. Overexpression impairs cold stress-induced nitric oxide (NO) production."]
["AT5G50170",null,996.78,-0.91401,0.12943,-7.0619,{"v":1.64e-12,"d":"1.64E-12"},{"v":3.53e-11,"d":"3.53E-11"},"C2 calcium/lipid-binding and GRAM domain containing protein.","AT3G61220","SDR1",187.51,-1.6129,0.25597,-6.3012,{"v":2.95e-10,"d":"2.95E-10"},{"v":6.33e-09,"d":"6.33E-09"},"full_name=short-chain dehydrogenase/reductase 1. NAD(P)-binding Rossmann-fold superfamily protein. CytADR/SDR1 is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. It can also act on menthone and neomenthol in vitro, but these do not represent likely endogenous activities of this enzyme in planta. GFP-tagged CytADR appears to localize to the cytosol where it likely plays a role in detoxifying reactive carbonyls. sdr1 mutants have altered responses to pathogens.","AT1G23800","ALDH2B7",215.08,1.6606,0.29564,5.617,{"v":1.94e-08,"d":"1.94E-08"},{"v":4.08E-7,"d":"4.08E-07"},"full_name=aldehyde dehydrogenase 2B7. aldehyde dehydrogenase 2B7. Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product."]
["AT1G11580","PMEPCRA",1985.4,-1.0523,0.14908,-7.0588,{"v":1.68e-12,"d":"1.68E-12"},{"v":3.61e-11,"d":"3.61E-11"},"full_name=methylesterase PCR A. methylesterase PCR A.","AT5G65683","WAVH2",128.54,1.8397,0.29218,6.2965,{"v":3.05e-10,"d":"3.05E-10"},{"v":6.52e-09,"d":"6.52E-09"},"full_name=WAV3 homolog 2. Zinc finger (C3HC4-type RING finger) family protein.","AT3G12360","ITN1",321.29,1.1878,0.21147,5.617,{"v":1.94e-08,"d":"1.94E-08"},{"v":4.08E-7,"d":"4.08E-07"},"full_name=INCREASED TOLERANCE TO NACL. Ankyrin repeat family protein. Encodes a protein with an ankyrin motif and transmembrane domains that is involved in salt tolerance. Expressed throughout the plant and localized to the plasma membrane. Loss of function mutations show an increased tolerance to salt based on assaying seedling growth in the presence of salt. In the mutants, induction of genes required for production of reactive oxygen species is reduced suggesting that itn1 promotes ROS production. It interacts with RCN1 in vivo and may regulate its subcellular localization."]
["AT2G41840",null,10504,0.51621,0.073136,7.0583,{"v":1.69e-12,"d":"1.69E-12"},{"v":3.62e-11,"d":"3.62E-11"},"Ribosomal protein S5 family protein.","AT1G78680","GGH2",164.27,1.7895,0.28426,6.2952,{"v":3.07e-10,"d":"3.07E-10"},{"v":6.56e-09,"d":"6.56E-09"},"full_name=gamma-glutamyl hydrolase 2. gamma-glutamyl hydrolase 2. The Arabidopsis protein AtGGH2 is a gamma-glutamyl hydrolase acting specifically on monoglutamates. The enzyme is involved in the tetrahydrofolate metabolism and located to the vacuole.","AT1G21660","AUXILIN-LIKE3",388.81,1.0494,0.18685,5.6162,{"v":1.95e-08,"d":"1.95E-08"},{"v":4.09e-07,"d":"4.09E-07"},"Chaperone DnaJ-domain superfamily protein."]
["AT2G18540",null,167.92,-2.4848,0.35226,-7.0538,{"v":1.74e-12,"d":"1.74E-12"},{"v":3.73e-11,"d":"3.73E-11"},"RmlC-like cupins superfamily protein.","AT2G22770","NAI1",460.83,1.2447,0.1978,6.2926,{"v":3.12e-10,"d":"3.12E-10"},{"v":6.67e-09,"d":"6.67E-09"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein. regulates the development of ER bodies. also involves in response to the endophytic fungus Piriformospora indica.","AT1G70680",null,46.956,-3.8618,0.68816,-5.6118,{"v":2E-8,"d":"2.00E-08"},{"v":4.19e-07,"d":"4.19E-07"},"Caleosin-related family protein."]
["AT2G35050",null,925.63,-0.88195,0.12515,-7.0474,{"v":1.82e-12,"d":"1.82E-12"},{"v":3.9e-11,"d":"3.90E-11"},"kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein.","AT5G10560",null,505.76,1.0148,0.16134,6.2895,{"v":3.18e-10,"d":"3.18E-10"},{"v":6.79e-09,"d":"6.79E-09"},"Glycosyl hydrolase family protein.","AT2G31585",null,422.45,1.3356,0.23822,5.6066,{"v":2.06e-08,"d":"2.06E-08"},{"v":4.32E-7,"d":"4.32E-07"},"other_RNA. Unknown gene"]
["AT1G20225",null,828.08,-0.88482,0.12558,-7.046,{"v":1.84e-12,"d":"1.84E-12"},{"v":3.94e-11,"d":"3.94E-11"},"Thioredoxin superfamily protein.","AT5G10720","HK5",120.49,1.9453,0.30946,6.286,{"v":3.26e-10,"d":"3.26E-10"},{"v":6.94e-09,"d":"6.94E-09"},"full_name=histidine kinase 5. histidine kinase 5. member of Histidine Kinase","AT1G21740",null,188.24,-1.4335,0.25602,-5.599,{"v":2.16e-08,"d":"2.16E-08"},{"v":4.5e-07,"d":"4.50E-07"},"DUF630 family protein, putative (DUF630 and DUF632)."]
["AT1G07420","SMO2-1",462.2,-1.1806,0.16756,-7.0456,1.85E-12,{"v":3.95e-11,"d":"3.95E-11"},"full_name=sterol 4-alpha-methyl-oxidase 2-1. sterol 4-alpha-methyl-oxidase 2-1. Arabidopsis thaliana sterol 4-alpha-methyl-oxidase mRNA","AT3G51410",null,151.28,2.1015,0.33437,6.285,3.28E-10,{"v":6.98e-09,"d":"6.98E-09"},"hypothetical protein (DUF241).","AT5G10390","HTR13",75.116,-2.2766,0.40673,-5.5974,{"v":2.18E-8,"d":"2.18E-08"},{"v":4.54e-07,"d":"4.54E-07"},"Histone superfamily protein."]
["AT3G41979",null,3558.3,11.752,1.6683,7.0447,{"v":1.86e-12,"d":"1.86E-12"},{"v":3.97e-11,"d":"3.97E-11"},"5.8SrRNA. 5.8SrRNA","AT3G24220","NCED6",54.456,-3.9042,0.62139,-6.2829,{"v":3.32e-10,"d":"3.32E-10"},{"v":7.06E-9,"d":"7.06E-09"},"full_name=nine-cis-epoxycarotenoid dioxygenase 6. nine-cis-epoxycarotenoid dioxygenase 6. A member of gene NCED-related gene family, encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene declines during the first 12h of imbibition.","AT2G20450",null,749.76,-1.0976,0.19612,-5.5967,{"v":2.19e-08,"d":"2.19E-08"},{"v":4.55e-07,"d":"4.55E-07"},"Ribosomal protein L14."]
["AT1G80050","APT2",99.871,-2.6803,0.38054,-7.0432,{"v":1.88e-12,"d":"1.88E-12"},{"v":4.01e-11,"d":"4.01E-11"},"full_name=adenine phosphoribosyl transferase 2. adenine phosphoribosyl transferase 2. Encodes an adenosine phosphoribosyl transferase(E.C:2.4.2.7), a constitutively expressed enzyme involved in the one-step salvage of adenine to AMP. This isozyme has high affinity for cytokinins and is likely to be localized to the cytosol.","AT5G51560",null,122.34,1.8822,0.29963,6.2817,{"v":3.35e-10,"d":"3.35E-10"},{"v":7.11e-09,"d":"7.11E-09"},"Leucine-rich repeat protein kinase family protein.","AT3G62530",null,1276.5,-0.99567,0.17801,-5.5934,{"v":2.23e-08,"d":"2.23E-08"},{"v":4.64e-07,"d":"4.64E-07"},"ARM repeat superfamily protein."]
["AT4G29070",null,706.92,-1.146,0.16275,-7.0414,{"v":1.9E-12,"d":"1.90E-12"},{"v":4.05e-11,"d":"4.05E-11"},"Phospholipase A2 family protein.","AT2G33520","ATHCYSTM7",51.666,-3.7049,0.59078,-6.2712,3.58E-10,{"v":7.6e-09,"d":"7.60E-09"},"cysteine-rich/transmembrane domain protein A.","AT1G70580","AOAT2",136.44,1.6087,0.28768,5.5919,{"v":2.25E-8,"d":"2.25E-08"},{"v":4.67e-07,"d":"4.67E-07"},"full_name=alanine-2-oxoglutarate aminotransferase 2. alanine-2-oxoglutarate aminotransferase 2. Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro."]
["AT2G23510","SDT",111.84,-3.2044,0.45549,-7.0351,{"v":1.99e-12,"d":"1.99E-12"},{"v":4.24e-11,"d":"4.24E-11"},"full_name=spermidine disinapoyl acyltransferase. spermidine disinapoyl acyltransferase.","AT2G34170","DEG21",71.905,2.3435,0.37373,6.2705,{"v":3.6E-10,"d":"3.60E-10"},{"v":7.63e-09,"d":"7.63E-09"},"hypothetical protein (DUF688).","AT2G04170",null,398.71,-1.1317,0.20244,-5.5902,{"v":2.27e-08,"d":"2.27E-08"},{"v":4.71e-07,"d":"4.71E-07"},"TRAF-like family protein."]
["AT5G13550","SULTR4;1",270.85,1.419,0.20175,7.0333,{"v":2.02e-12,"d":"2.02E-12"},{"v":4.29e-11,"d":"4.29E-11"},"full_name=sulfate transporter 4.1. sulfate transporter 4.1. Encodes a sulfate transporter.","AT2G38540","LP1",3657.3,1.0568,0.16866,6.2657,{"v":3.71e-10,"d":"3.71E-10"},{"v":7.86e-09,"d":"7.86E-09"},"full_name=lipid transfer protein 1. lipid transfer protein 1. Non-specific lipid transfer protein. Binds calmodulin in a Ca2+-independent manner. Localized to the cell wall. Specifically expressed in L1 epidermal layer. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.","AT4G03430","EMB2770",625.09,0.90946,0.16275,5.5881,{"v":2.3e-08,"d":"2.30E-08"},{"v":4.76e-07,"d":"4.76E-07"},"full_name=EMBRYO DEFECTIVE 2770. pre-mRNA splicing factor-like protein. Encodes a nuclear protein similar to the human U5 small ribonucleoprotein-associated 102-kD protein and to the yeast pre-mRNA splicing factors Prp1p and Prp6p. STA1 expression is upregulated by cold stress, and the sta1-1 mutant is defective in the splicing of the cold-induced COR15A gene. Luciferase imaging was used to isolate a recessive mutant, sta1-1, with enhanced stability of the normally unstable luciferase transcript. This mutation also causes the stabilization of some endogenous gene transcripts and has a range of developmental and stress response phenotypes."]
["AT5G14620","DRM2",583.19,-1.0132,0.14413,-7.0302,{"v":2.06e-12,"d":"2.06E-12"},4.38E-11,"full_name=domains rearranged methyltransferase 2. domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues.","AT1G23080","PIN7",381.66,1.0557,0.1685,6.2655,{"v":3.72e-10,"d":"3.72E-10"},{"v":7.86e-09,"d":"7.86E-09"},"full_name=PIN-FORMED 7. Auxin efflux carrier family protein. Encodes a novel component of auxin efflux that is located apically in the basal cell and is involved during embryogenesis in setting up the apical-basal axis in the embryo. It is also involved in pattern specification during root development. In roots, it is expressed at lateral and basal membranes of provascular cells in the meristem and elongation zone, whereas in the columella cells it coincides with the PIN3 domain. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. PINs are directly involved of in catalyzing cellular auxin efflux.","AT3G63520","CCD1",2202.4,0.78686,0.14083,5.5872,{"v":2.31e-08,"d":"2.31E-08"},{"v":4.78e-07,"d":"4.78E-07"},"full_name=carotenoid cleavage dioxygenase 1. carotenoid cleavage dioxygenase 1. Encodes a protein with 9-<i>cis</i>-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including &#946;-carotene, lutein, zeaxanthin, and all-<i>trans</i>-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-<i>cis</i>-double or allenic bonds."]
["AT1G34630",null,677.1,-1.241,0.17655,-7.029,2.08E-12,{"v":4.41e-11,"d":"4.41E-11"},"transmembrane protein.","AT2G03090","EXPA15",1232,1.3812,0.22047,6.2648,3.73E-10,{"v":7.88e-09,"d":"7.88E-09"},"full_name=expansin A15. expansin A15. member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","AT5G58380","SIP1",396.64,1.422,0.25465,5.5843,{"v":2.35e-08,"d":"2.35E-08"},{"v":4.86e-07,"d":"4.86E-07"},"full_name=SOS3-interacting protein 1. SOS3-interacting protein 1. Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase."]
["AT5G44280","RING1A",421.22,-1.2141,0.17274,-7.0288,2.08E-12,{"v":4.41e-11,"d":"4.41E-11"},"full_name=RING 1A. RING 1A. Encodes a nuclear localized protein with similarity to animal polycomb repressive core complex1 (PRC1) core component RING.Appears to function redundantly with ATRING1b, a close paralog. Both interact physically with CLF and LHP1 and appear to function together to repress class I KNOX gene expression.","AT2G01420","PIN4",169.22,1.5599,0.24906,6.2632,{"v":3.77e-10,"d":"3.77E-10"},{"v":7.96e-09,"d":"7.96E-09"},"full_name=PIN-FORMED 4. Auxin efflux carrier family protein. Encodes a putative auxin efflux carrier that is localized in developing and mature root meristems. It is involved in the maintenance of embryonic auxin gradients. A role for AtPIN4 in generating a sink for auxin below the quiescent center of the root meristem that is essential for auxin distribution and patterning is proposed. In the root, PIN4 is detected around the quiescent center and cells surrounding it, and localizes basally in provascular cells. PIN4 expression is upregulated in brassinosteroid-insensitive mutant (PMID 16141452).","AT1G11410",null,96.339,1.8909,0.33866,5.5835,{"v":2.36E-8,"d":"2.36E-08"},{"v":4.87e-07,"d":"4.87E-07"},"S-locus lectin protein kinase family protein."]
["AT3G53430",null,3477.9,0.64214,0.091361,7.0286,{"v":2.09e-12,"d":"2.09E-12"},{"v":4.41e-11,"d":"4.41E-11"},"Ribosomal protein L11 family protein.","AT1G31580","ECS1",66.243,2.5096,0.40083,6.2611,{"v":3.82e-10,"d":"3.82E-10"},{"v":8.06e-09,"d":"8.06E-09"},"ECS1. Encodes cell wall protein. ECS1 is not a Xcc750 resistance gene, but the genetic data indicate that ECS1 is linked to a locus influencing resistance to Xcc750.","AT5G62670","HA11",305.44,1.2398,0.22206,5.5832,{"v":2.36E-8,"d":"2.36E-08"},{"v":4.88e-07,"d":"4.88E-07"},"full_name=H(+)-ATPase 11. H[+]-ATPase 11."]
["AT1G31930","XLG3",940.41,-0.85505,0.1217,-7.026,2.13E-12,{"v":4.49e-11,"d":"4.49E-11"},"full_name=extra-large GTP-binding protein 3. extra-large GTP-binding protein 3. Encodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses.","AT5G39050","PMAT1",364.03,-1.2159,0.19429,-6.2581,{"v":3.9E-10,"d":"3.90E-10"},{"v":8.21e-09,"d":"8.21E-09"},"full_name=phenolic glucoside malonyltransferase 1. HXXXD-type acyl-transferase family protein. Encodes a malonyltransferase that may play a role in phenolic xenobiotic detoxification.","AT5G58720",null,752,0.89873,0.16107,5.5797,{"v":2.41e-08,"d":"2.41E-08"},{"v":4.97e-07,"d":"4.97E-07"},"smr (Small MutS Related) domain-containing protein."]
["AT2G45220","PME17",63.802,-3.7381,0.53214,-7.0246,{"v":2.15e-12,"d":"2.15E-12"},{"v":4.53e-11,"d":"4.53E-11"},"Plant invertase/pectin methylesterase inhibitor superfamily.","AT1G29400","ML5",729.3,-0.88298,0.14112,-6.2568,{"v":3.93e-10,"d":"3.93E-10"},{"v":8.27e-09,"d":"8.27E-09"},"full_name=MEI2-like protein 5. MEI2-like protein 5. A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.","AT5G65630","GTE7",748.14,-0.97626,0.17503,-5.5778,{"v":2.44E-8,"d":"2.44E-08"},{"v":5.02e-07,"d":"5.02E-07"},"full_name=global transcription factor group E7. global transcription factor group E7. This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation."]
["AT3G25860","LTA2",681.91,-0.95386,0.13583,-7.0226,2.18E-12,{"v":4.59e-11,"d":"4.59E-11"},"2-oxoacid dehydrogenases acyltransferase family protein. Nuclear encoded dihydrolipoamide S-acetyltransferase (LTA2) that encodes teh Pyruvate Decarboxylase E2 subunit. Mutant has embryo defect.","AT2G16430","PAP10",1599.4,-0.78716,0.12581,-6.2566,{"v":3.94e-10,"d":"3.94E-10"},{"v":8.27e-09,"d":"8.27E-09"},"full_name=purple acid phosphatase 10. purple acid phosphatase 10.","AT2G41190",null,2338.8,2.7211,0.48787,5.5774,{"v":2.44E-8,"d":"2.44E-08"},{"v":5.03e-07,"d":"5.03E-07"},"Transmembrane amino acid transporter family protein."]
["AT4G01026","PYL7",332.06,-1.3919,0.1982,-7.0226,2.18E-12,{"v":4.59e-11,"d":"4.59E-11"},"full_name=PYR1-like 7. PYR1-like 7. Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2. PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of ABI1 and ABI2.","AT1G01620","PIP1C",272.64,1.2972,0.20736,6.2556,{"v":3.96e-10,"d":"3.96E-10"},{"v":8.31e-09,"d":"8.31E-09"},"full_name=plasma membrane intrinsic protein 1C. plasma membrane intrinsic protein 1C. a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development.","AT1G64950","CYP89A5",381.57,1.2676,0.22735,5.5755,{"v":2.47e-08,"d":"2.47E-08"},{"v":5.08e-07,"d":"5.08E-07"},"full_name=cytochrome P450, family 89, subfamily A, polypeptide 5. cytochrome P450, family 89, subfamily A, polypeptide 5. member of CYP89A"]
["AT5G05270","CHIL",323.92,1.3971,0.199,7.0209,{"v":2.2e-12,"d":"2.20E-12"},{"v":4.64e-11,"d":"4.64E-11"},"full_name=chalcone isomerase like. Chalcone-flavanone isomerase family protein.","AT4G27850",null,39.512,3.6631,0.58609,6.2501,{"v":4.1e-10,"d":"4.10E-10"},{"v":8.6e-09,"d":"8.60E-09"},"Glycine-rich protein family.","AT4G18440",null,327.66,-1.225,0.21996,-5.5693,{"v":2.56e-08,"d":"2.56E-08"},{"v":5.25e-07,"d":"5.25E-07"},"L-Aspartase-like family protein."]
["AT1G14930",null,10554,-0.78258,0.11153,-7.0169,{"v":2.27e-12,"d":"2.27E-12"},{"v":4.77e-11,"d":"4.77E-11"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein.","AT3G62360",null,1479,0.70912,0.11355,6.245,{"v":4.24e-10,"d":"4.24E-10"},{"v":8.87e-09,"d":"8.87E-09"},"Carbohydrate-binding-like fold.","AT2G01250","RPL7B",4150.9,-0.67207,0.12067,-5.5693,{"v":2.56e-08,"d":"2.56E-08"},{"v":5.25e-07,"d":"5.25E-07"},"Ribosomal protein L30/L7 family protein."]
["AT1G63240",null,1177.6,-0.81372,0.11605,-7.0117,{"v":2.35e-12,"d":"2.35E-12"},{"v":4.94e-11,"d":"4.94E-11"},"hypothetical protein.","AT3G45780","PHOT1",1299.8,0.84388,0.13518,6.2428,{"v":4.3e-10,"d":"4.30E-10"},{"v":8.99e-09,"d":"8.99E-09"},"full_name=phototropin 1. phototropin 1. Blue-light photoreceptor. Contains a light activated serine-threonine kinase domain and LOV1 and LOV2 repeats. Mutants are defective in blue-light response. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT1 undergoes blue-light-dependent autophosphorylation. At least eight phosphorylation sites have been identified in PHOT1. Phosphorylation of serine851 in the activation loop of PHOT1 appears to be required for stomatal opening, chloroplast accumulation, leaf flattening, and phototropism, and phosphorylation of serine849 may also contribute to the regulation of these responses. Phosphorylation-dependent binding of 14-3-3 proteins to the Hinge1 region of PHOT1 appears to require serine350 and serine376.","AT2G30490","C4H",954.28,0.87909,0.15791,5.567,{"v":2.59E-8,"d":"2.59E-08"},{"v":5.31e-07,"d":"5.31E-07"},"full_name=cinnamate-4-hydroxylase. cinnamate-4-hydroxylase. Encodes a cinnamate-4-hydroxylase. Mutations in this gene impact phenylpropanoid metabolism, growth and development."]
["AT1G65880","BZO1",1564.1,-3.9311,0.56071,-7.0109,{"v":2.37e-12,"d":"2.37E-12"},4.97E-11,"full_name=benzoyloxyglucosinolate 1. benzoyloxyglucosinolate 1. Encodes a benzoate-CoA ligase. Involved in the biosynthesis of benzoyloxyglucosinolate in Arabidopsis seeds.","AT1G06570","PDS1",422.86,-1.2255,0.19655,-6.235,{"v":4.52e-10,"d":"4.52E-10"},{"v":9.44e-09,"d":"9.44E-09"},"full_name=phytoene desaturation 1. 4-hydroxyphenylpyruvate dioxygenase. Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants.","AT1G58380","XW6",650.22,-0.98586,0.17711,-5.5664,{"v":2.6e-08,"d":"2.60E-08"},{"v":5.33e-07,"d":"5.33E-07"},"Ribosomal protein S5 family protein."]
["AT1G79270","ECT8",241.88,1.8228,0.26017,7.0064,{"v":2.45e-12,"d":"2.45E-12"},{"v":5.12e-11,"d":"5.12E-11"},"full_name=evolutionarily conserved C-terminal region 8. evolutionarily conserved C-terminal region 8.","AT2G24610","CNGC14",116.59,1.9489,0.31258,6.2348,{"v":4.52e-10,"d":"4.52E-10"},{"v":9.44e-09,"d":"9.44E-09"},"full_name=cyclic nucleotide-gated channel 14. cyclic nucleotide-gated channel 14. member of Cyclic nucleotide gated channel family","AT5G67200",null,68.657,-2.3314,0.41889,-5.5657,{"v":2.61e-08,"d":"2.61E-08"},{"v":5.34e-07,"d":"5.34E-07"},"Leucine-rich repeat protein kinase family protein."]
["AT4G34290","SWIB3",738.57,0.92798,0.1325,7.0038,{"v":2.49e-12,"d":"2.49E-12"},5.21E-11,"SWIB/MDM2 domain superfamily protein.","AT4G18480","CHLI1",1951.6,0.77919,0.12514,6.2267,{"v":4.76e-10,"d":"4.76E-10"},{"v":9.93e-09,"d":"9.93E-09"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein. Encodes the CHLI subunit of magnesium chelatase which is required for chlorophyll biosynthesis. All four cysteine residues of the protein form two disulfide bonds (Cys102-Cys193 and Cys354-Cys396) under oxidized conditions but are fully reduced by reduction. It was suggested that the redox state of CHLI is regulated in vivo by the change of the redox environment in the chloroplasts probably via the Trx system.","AT4G08685","SAH7",154.68,-1.5057,0.27061,-5.564,{"v":2.64e-08,"d":"2.64E-08"},{"v":5.38e-07,"d":"5.38E-07"},"Pollen Ole e 1 allergen and extensin family protein. Encodes a protein, expressed in leaves, with similarity to pollen allergens."]
["AT1G04580","AO4",475.93,-1.1476,0.16389,-7.0025,{"v":2.52e-12,"d":"2.52E-12"},{"v":5.26e-11,"d":"5.26E-11"},"full_name=aldehyde oxidase 4. aldehyde oxidase 4. Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.","AT5G07470","PMSR3",1295.7,-0.92949,0.14928,-6.2263,4.78E-10,{"v":9.95e-09,"d":"9.95E-09"},"full_name=peptidemethionine sulfoxide reductase 3. peptidemethionine sulfoxide reductase 3. ubiquitous enzyme that repairs oxidatively damaged proteins","AT1G12805",null,194.02,-2.2941,0.41236,-5.5634,{"v":2.65e-08,"d":"2.65E-08"},{"v":5.4e-07,"d":"5.40E-07"},"nucleotide binding protein."]
["AT3G21380",null,115.68,-2.1441,0.30627,-7.0006,{"v":2.55e-12,"d":"2.55E-12"},{"v":5.32e-11,"d":"5.32E-11"},"Mannose-binding lectin superfamily protein.","AT5G56040","SKM2",250.54,1.2742,0.20471,6.2241,{"v":4.84e-10,"d":"4.84E-10"},{"v":1.01e-08,"d":"1.01E-08"},"Leucine-rich receptor-like protein kinase family protein.","AT5G54770","THI1",10257,0.78486,0.14111,5.562,{"v":2.67e-08,"d":"2.67E-08"},{"v":5.43e-07,"d":"5.43E-07"},"thiazole biosynthetic enzyme, chloroplast (ARA6) (THI1) (THI4). Encodes a thiamine biosynthetic gene that has a dual function in thiamine biosynthesis and mitochondrial DNA damage tolerance. It appears to be involved in producing the thiazole portion of thiamine (vitamin B1). A crystal structure of the protein reveals that it forms a 2-ring homo-octamer."]
["AT5G59130",null,146.09,2.825,0.40358,6.9998,2.56E-12,{"v":5.35e-11,"d":"5.35E-11"},"Subtilase family protein.","AT3G14590","NTMC2T6.2",237.35,-1.6453,0.26435,-6.2239,{"v":4.85e-10,"d":"4.85E-10"},{"v":1.01e-08,"d":"1.01E-08"},"Calcium-dependent lipid-binding (CaLB domain) family protein.","AT2G29570","PCNA2",155.48,-1.5139,0.27245,-5.5568,{"v":2.75e-08,"d":"2.75E-08"},{"v":5.59e-07,"d":"5.59E-07"},"full_name=proliferating cell nuclear antigen 2. proliferating cell nuclear antigen 2. Functionally interacts with POLH to repair DNA damaged by UVB damage. May be sumoylated."]
["AT1G52890","NAC019",3325.6,-1.0094,0.14431,-6.9941,{"v":2.67e-12,"d":"2.67E-12"},{"v":5.56e-11,"d":"5.56E-11"},"full_name=NAC domain containing protein 19. NAC domain containing protein 19. encodes a NAC transcription factor whose expression is induced by drought, high salt, and abscisic acid. This gene binds to ERD1 promoter in vitro.","AT1G65720",null,952.57,-0.94872,0.15246,-6.2228,{"v":4.88e-10,"d":"4.88E-10"},{"v":1.01e-08,"d":"1.01E-08"},"transmembrane protein.","AT5G64670",null,291.52,-1.1569,0.20829,-5.5544,{"v":2.79e-08,"d":"2.79E-08"},{"v":5.67e-07,"d":"5.67E-07"},"Ribosomal protein L18e/L15 superfamily protein."]
["AT2G30200","EMB3147",789.21,-0.97216,0.13901,-6.9934,{"v":2.68e-12,"d":"2.68E-12"},{"v":5.58e-11,"d":"5.58E-11"},"full_name=EMBRYO DEFECTIVE 3147. EMBRYO DEFECTIVE 3147.","AT3G01510","LSF1",89.989,2.1605,0.34733,6.2203,{"v":4.96e-10,"d":"4.96E-10"},{"v":1.03E-8,"d":"1.03E-08"},"full_name=like SEX4 1. like SEX4 1. Encodes a putative phosphatase, LSF1, required for normal starch turnover in leaves.","AT4G36180","MUL",264.35,-1.2178,0.2196,-5.5455,{"v":2.93e-08,"d":"2.93E-08"},{"v":5.95e-07,"d":"5.95E-07"},"Leucine-rich receptor-like protein kinase family protein."]
["AT5G48100","TT10",1780.5,-1.1423,0.16339,-6.9911,{"v":2.73e-12,"d":"2.73E-12"},{"v":5.67e-11,"d":"5.67E-11"},"full_name=TRANSPARENT TESTA 10. Laccase/Diphenol oxidase family protein. Encodes a protein that is similar to laccase-like polyphenol oxidases. Involved in lignin and flavonoids biosynthesis. It has four conserved copper binding domains. Expressed in developing testa, where it colocalizes with the flavonoid end products proanthocyanidins and flavonols. Mutant plants exhibited a delay in developmentally determined browning of the testa, characterized by the pale brown color of seed coat. The tt10 mutant seeds accumulate more epicatechin monomers and more soluble proanthocyanidins than wild-type seeds. Flavonol composition was also affected in tt10 seeds, which exhibited a higher ratio of quercetin rhamnoside monomers versus dimers than wild-type seeds.","AT3G13690",null,395.62,1.151,0.18513,6.2176,{"v":5.05e-10,"d":"5.05E-10"},{"v":1.05E-8,"d":"1.05E-08"},"kinase with adenine nucleotide alpha hydrolases-like domain-containing protein.","AT2G26430","RCY1",494.42,1.0431,0.18814,5.5442,{"v":2.95e-08,"d":"2.95E-08"},{"v":5.99E-7,"d":"5.99E-07"},"full_name=arginine-rich cyclin 1. arginine-rich cyclin 1. Encodes an ania-6a type arginine-rich cyclin which confers tolerance to LiCl and NaCl when expressed in yeast."]
["AT4G39730","PLAT1",5529.3,-0.5619,0.080418,-6.9873,{"v":2.8e-12,"d":"2.80E-12"},{"v":5.8200000000000003E-11,"d":"5.82E-11"},"full_name=PLAT domain protein 1. Lipase/lipooxygenase, PLAT/LH2 family protein.","AT3G52780","PAP20",80.9,-2.3905,0.38469,-6.214,{"v":5.16e-10,"d":"5.16E-10"},{"v":1.07E-8,"d":"1.07E-08"},"Purple acid phosphatases superfamily protein.","AT2G31350","GLX2-5",336.51,1.2365,0.22306,5.5432,{"v":2.97e-08,"d":"2.97E-08"},{"v":6.02e-07,"d":"6.02E-07"},"full_name=glyoxalase 2-5. glyoxalase 2-5. Encodes a mitochondrial glyoxalase 2 that can accommodate a number of different metal centers and with the predominant metal center being Fe(III)Zn(II)."]
["AT1G12010","ACO3",1895.5,-1.2877,0.1843,-6.9867,{"v":2.81e-12,"d":"2.81E-12"},5.84E-11,"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. Encodes a protein that appears to have 1-amino-cyclopropane-1-carboxylic acid oxidase activity based on mutant analyses.","AT1G05340","ATHCYSTM1",66.777,-2.7327,0.43977,-6.214,{"v":5.17e-10,"d":"5.17E-10"},{"v":1.07E-8,"d":"1.07E-08"},"cysteine-rich TM module stress tolerance protein.","AT1G10690","SMR8",64.487,2.3822,0.42985,5.542,{"v":2.99e-08,"d":"2.99E-08"},{"v":6.05e-07,"d":"6.05E-07"},"cyclin-dependent kinase inhibitor."]
["AT4G10120","ATSPS4F",163.67,-1.7743,0.25412,-6.982,{"v":2.91e-12,"d":"2.91E-12"},{"v":6.03e-11,"d":"6.03E-11"},"Sucrose-phosphate synthase family protein. Encodes a protein with putative sucrose-phosphate synthase activity.","AT3G20210","DELTA-VPE",81.296,-2.381,0.38339,-6.2103,{"v":5.29e-10,"d":"5.29E-10"},{"v":1.09E-8,"d":"1.09E-08"},"full_name=delta vacuolar processing enzyme. delta vacuolar processing enzyme. Encodes a vacuolar processing enzyme with caspase-1-like activity that is specifically expressed in inner integument of developing seeds. Mutants display abnormal seed coat development. It is speculated to be involved in cell death of limited cell layers, the purpose of which is to form a seed coat.","AT3G07780","OBE1",508.06,1.3312,0.24022,5.5418,{"v":2.99e-08,"d":"2.99E-08"},{"v":6.05e-07,"d":"6.05E-07"},"full_name=OBERON1. potyvirus VPg interacting protein (DUF1423). Encodes a nuclear PHD finger protein that is functionally redundant with OBE2 and plays an important role in the maintenance and/or establishment of the root and shoot apical meristems."]
["AT2G25980",null,631,1.0869,0.15568,6.9815,{"v":2.92e-12,"d":"2.92E-12"},{"v":6.04e-11,"d":"6.04E-11"},"Mannose-binding lectin superfamily protein.","AT5G07870",null,202.36,1.3976,0.22535,6.2022,{"v":5.57e-10,"d":"5.57E-10"},{"v":1.15E-8,"d":"1.15E-08"},"HXXXD-type acyl-transferase family protein.","AT1G15010",null,62.063,2.4473,0.44206,5.536,{"v":3.09e-08,"d":"3.09E-08"},{"v":6.25e-07,"d":"6.25E-07"},"mediator of RNA polymerase II transcription subunit."]
["AT1G79150","NOC3",977.44,0.83178,0.11916,6.9802,{"v":2.95e-12,"d":"2.95E-12"},{"v":6.09e-11,"d":"6.09E-11"},"binding protein.","AT2G27190","PAP12",952.11,0.78877,0.12719,6.2014,{"v":5.59e-10,"d":"5.59E-10"},{"v":1.15E-8,"d":"1.15E-08"},"full_name=purple acid phosphatase 12. purple acid phosphatase 12. Encodes a root-secreted purple acid phosphatase involved in extracellular phosphate-scavenging.","AT1G21400",null,221.64,1.5879,0.28685,5.5356,{"v":3.1E-8,"d":"3.10E-08"},{"v":6.26e-07,"d":"6.26E-07"},"Thiamin diphosphate-binding fold (THDP-binding) superfamily protein."]
["AT1G78500","PEN6",820.99,-3.7512,0.53752,-6.9788,{"v":2.98e-12,"d":"2.98E-12"},{"v":6.15e-11,"d":"6.15E-11"},"Terpenoid cyclases family protein. Encodes a protein with pentacyclic triterpene synthase activity. In addition to the compounds lupeol, &#945;-amyrin and bauerenol, this enzyme was also shown to produce two <i>seco</i>-triterpenes: &#945;- and &#946;-<i>seco</i>-amyrin.","AT1G01060","LHY",55.373,-3.2206,0.51975,-6.1964,{"v":5.78e-10,"d":"5.78E-10"},{"v":1.19e-08,"d":"1.19E-08"},"full_name=LATE ELONGATED HYPOCOTYL. Homeodomain-like superfamily protein. LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1","AT4G00620","EMB3127",198.95,-1.4036,0.25365,-5.5335,{"v":3.14e-08,"d":"3.14E-08"},{"v":6.33e-07,"d":"6.33E-07"},"full_name=EMBRYO DEFECTIVE 3127. Amino acid dehydrogenase family protein."]
["AT4G37930","SHM1",1533.9,0.8482,0.12161,6.9746,3.07E-12,{"v":6.33e-11,"d":"6.33E-11"},"full_name=serine transhydroxymethyltransferase 1. serine transhydroxymethyltransferase 1. Encodes a protein with mitochondrial serine hydroxymethyltransferase activity, which functions in the photorespiratory pathway, catalyzes the conversion of serine and tetrahydrofolate to glycine and 5,10-methylene tetrahydrofolate. Involved in controlling cell damage caused by abiotic stress, such as high light and salt and the hypersensitive defense response of plants.","AT5G62440","DOM1",674.12,-0.90191,0.14563,-6.1933,{"v":5.89e-10,"d":"5.89E-10"},{"v":1.21e-08,"d":"1.21E-08"},"EMB514 (DUF3223). Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division.","AT5G02260","EXPA9",356.31,-1.1057,0.19997,-5.5293,{"v":3.21e-08,"d":"3.21E-08"},{"v":6.47e-07,"d":"6.47E-07"},"full_name=expansin A9. expansin A9. member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)"]
["AT2G21590","APL4",483.31,1.54,0.22085,6.9731,{"v":3.1e-12,"d":"3.10E-12"},{"v":6.38e-11,"d":"6.38E-11"},"Glucose-1-phosphate adenylyltransferase family protein. Encodes the large subunit of ADP-glucose pyrophosphorylase, the enzyme which catalyzes the first and limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms of the large subunit (ApL1-4) have been described.","AT3G22231","PCC1",49.882,9.5143,1.5364,6.1925,{"v":5.92e-10,"d":"5.92E-10"},{"v":1.22E-8,"d":"1.22E-08"},"full_name=PATHOGEN AND CIRCADIAN CONTROLLED 1. pathogen and circadian controlled 1. Encodes a member of a novel 6 member Arabidopsis gene family. Expression of PCC1 is regulated by the circadian clock and is upregulated in response to both virulent and avirulent strains of Pseudomonas syringae pv. tomato.","AT1G27320","HK3",553.77,0.92264,0.16725,5.5164,{"v":3.46e-08,"d":"3.46E-08"},{"v":6.96e-07,"d":"6.96E-07"},"full_name=histidine kinase 3. histidine kinase 3. Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2."]
["AT5G01590","TIC56",1083.3,0.8033,0.1152,6.9731,{"v":3.1e-12,"d":"3.10E-12"},{"v":6.38e-11,"d":"6.38E-11"},"histone-lysine N-methyltransferase ATXR3-like protein.","AT1G21070","URGT2",234.71,1.4871,0.24017,6.1919,{"v":5.94e-10,"d":"5.94E-10"},{"v":1.22E-8,"d":"1.22E-08"},"Nucleotide-sugar transporter family protein.","AT1G16240","SYP51",571.93,1.0519,0.19081,5.513,{"v":3.53e-08,"d":"3.53E-08"},{"v":7.09e-07,"d":"7.09E-07"},"full_name=syntaxin of plants 51. syntaxin of plants 51. Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed."]
["AT3G57780",null,1570.7,-0.72929,0.10465,-6.969,{"v":3.19e-12,"d":"3.19E-12"},{"v":6.56e-11,"d":"6.56E-11"},"nucleolar-like protein.","AT1G03030",null,370.75,-1.1892,0.19206,-6.1919,{"v":5.94e-10,"d":"5.94E-10"},{"v":1.22E-8,"d":"1.22E-08"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT4G34220","RDK1",245.65,-1.2325,0.22358,-5.5126,{"v":3.54e-08,"d":"3.54E-08"},{"v":7.1e-07,"d":"7.10E-07"},"Leucine-rich repeat protein kinase family protein."]
["AT3G25110","FaTA",491.63,-1.2921,0.18543,-6.9679,3.22E-12,{"v":6.61e-11,"d":"6.61E-11"},"full_name=fatA acyl-ACP thioesterase. fatA acyl-ACP thioesterase. Encodes a FatA acyl-ACP thioesterase","AT3G13330","PA200",1078.8,-0.75481,0.12201,-6.1867,{"v":6.14e-10,"d":"6.14E-10"},{"v":1.26E-8,"d":"1.26E-08"},"full_name=proteasome activating protein 200. proteasome activating protein 200. Encodes a protein that interacts with the 26S proteasome. Mutants are phenotypically indistinguishable from wild type plants under a variety of growth conditions. Protein levels increase upon exposure of seedlings to MG132, a specific, potent, reversible, and cell-permeable proteasome inhibitor.","AT4G12560","CPR1",666.79,0.90921,0.16494,5.5122,{"v":3.54e-08,"d":"3.54E-08"},{"v":7.1e-07,"d":"7.10E-07"},"full_name=CONSTITUTIVE EXPRESSER OF PR GENES 1. F-box and associated interaction domains-containing protein. Encodes CPR1 (Constitutive Expresser of PR Genes 1, also known as CPR30), a F-Box protein that functions as a negative regulator of defense response and targets resistance proteins."]
["AT1G79530","GAPCP-1",1404.3,0.8116,0.1165,6.9663,{"v":3.25e-12,"d":"3.25E-12"},{"v":6.68e-11,"d":"6.68E-11"},"full_name=glyceraldehyde-3-phosphate dehydrogenase of plastid 1. glyceraldehyde-3-phosphate dehydrogenase of plastid 1. Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots.","AT4G37110",null,77.878,2.2659,0.36651,6.1823,{"v":6.32e-10,"d":"6.32E-10"},{"v":1.29E-8,"d":"1.29E-08"},"Zinc-finger domain of monoamine-oxidase A repressor R1.","AT4G36210",null,1182.9,0.84384,0.15312,5.5111,{"v":3.57e-08,"d":"3.57E-08"},{"v":7.14e-07,"d":"7.14E-07"},"transmembrane/coiled-coil protein (DUF726)."]
["AT2G36990","SIGF",647.63,0.94794,0.1362,6.9601,{"v":3.4e-12,"d":"3.40E-12"},{"v":6.97e-11,"d":"6.97E-11"},"full_name=RNApolymerase sigma-subunit F. RNApolymerase sigma-subunit F. Encodes a general sigma factor in chloroplasts and is probably responsible for the recognition of sigma 70 type standard bacteria-type multi-subunit RNA polymerase (PEP) promoters in young cotyledons. It is a substrate for regulatory phosphorylation by cpCK2, a nuclear-coded plastid-targeted casein kinase 2, that has been implicated as a key component in plant sigma factor phosphorylation and transcriptional regulation.","AT4G13850","GR-RBP2",2590.3,-0.62708,0.10144,-6.1816,{"v":6.35e-10,"d":"6.35E-10"},{"v":1.3e-08,"d":"1.30E-08"},"full_name=glycine-rich RNA-binding protein 2. glycine-rich RNA-binding protein 2. Encodes a glycine-rich RNA-binding protein. Gene expression is induced by cold.","AT1G48405",null,33.516,4.9753,0.90349,5.5067,{"v":3.66e-08,"d":"3.66E-08"},{"v":7.31e-07,"d":"7.31E-07"},"Kinase interacting (KIP1-like) family protein."]
["AT1G48540",null,701.43,-0.92072,0.13229,-6.9599,{"v":3.41e-12,"d":"3.41E-12"},{"v":6.97e-11,"d":"6.97E-11"},"Outer arm dynein light chain 1 protein.","AT1G33490",null,576.23,-0.9971,0.16137,-6.1791,{"v":6.45e-10,"d":"6.45E-10"},{"v":1.31E-8,"d":"1.31E-08"},"E3 ubiquitin-protein ligase.","AT3G12510",null,97.881,2.1514,0.39071,5.5063,{"v":3.67e-08,"d":"3.67E-08"},{"v":7.33e-07,"d":"7.33E-07"},"MADS-box family protein."]
["AT1G31070","GlcNAc1pUT1",608.05,-1.027,0.14758,-6.9584,{"v":3.44e-12,"d":"3.44E-12"},{"v":7.04e-11,"d":"7.04E-11"},"full_name=N-acetylglucosamine-1-phosphate uridylyltransferase 1. N-acetylglucosamine-1-phosphate uridylyltransferase 1. Encodes a protein that functions as an N-acetylglucosamine-1-phosphate uridylyltransferase that catalyzes the formation of UDP-N-acetylglucosamine (UDP-GlcNAc). This is an essential precursor for glycolipid and glycoprotein synthesis and is also used for regulatory protein modification in signaling pathways. The enzyme can also catalyze the reverse reaction using both UDP-GlcNAc and the less common UDP-N-acetylgalactosamine as substrates.","AT2G41800","TEB",155.63,1.5509,0.25106,6.1775,{"v":6.51e-10,"d":"6.51E-10"},{"v":1.33E-8,"d":"1.33E-08"},"imidazolonepropionase (Protein of unknown function, DUF642).","AT2G20515",null,111.42,-1.7254,0.31352,-5.5034,{"v":3.73e-08,"d":"3.73E-08"},{"v":7.44e-07,"d":"7.44E-07"},"pollen Ole e I family allergen protein."]
["AT4G02480",null,4655,-0.66609,0.095773,-6.9549,{"v":3.53e-12,"d":"3.53E-12"},{"v":7.21e-11,"d":"7.21E-11"},"AAA-type ATPase family protein.","AT3G18820","RAB7B",766.92,-0.86397,0.13993,-6.1743,{"v":6.65e-10,"d":"6.65E-10"},{"v":1.35E-8,"d":"1.35E-08"},"full_name=RAB GTPase homolog G3F. RAB GTPase homolog G3F.","AT1G53040",null,169.56,-1.4437,0.26303,-5.4888,{"v":4.05e-08,"d":"4.05E-08"},{"v":8.07e-07,"d":"8.07E-07"},"tRNA (met) cytidine acetyltransferase, putative (DUF616)."]
["AT5G13000","GSL12",2370,-0.64296,0.092453,-6.9544,{"v":3.54e-12,"d":"3.54E-12"},{"v":7.22e-11,"d":"7.22E-11"},"full_name=glucan synthase-like 12. glucan synthase-like 12. encodes a gene similar to callose synthase","AT1G22400","UGT85A1",251.56,1.9756,0.32024,6.169,{"v":6.87e-10,"d":"6.87E-10"},{"v":1.4E-8,"d":"1.40E-08"},"UDP-Glycosyltransferase superfamily protein.","AT1G15240","SNX3",617.47,0.93105,0.16969,5.4866,{"v":4.1e-08,"d":"4.10E-08"},{"v":8.16E-7,"d":"8.16E-07"},"phox (PX) domain-containing protein."]
["AT3G59910",null,970.81,-0.85734,0.12329,-6.9536,{"v":3.56e-12,"d":"3.56E-12"},7.26E-11,"Ankyrin repeat family protein.","AT1G23170",null,60.728,2.6098,0.42324,6.1663,{"v":6.99e-10,"d":"6.99E-10"},{"v":1.42E-8,"d":"1.42E-08"},"transmembrane protein (Protein of unknown function DUF2359, transmembrane).","AT5G67280","RLK",150.58,-1.5665,0.28552,-5.4863,{"v":4.1e-08,"d":"4.10E-08"},{"v":8.17e-07,"d":"8.17E-07"},"full_name=receptor-like kinase. receptor-like kinase."]
["AT5G47930",null,3188,0.61624,0.088783,6.941,{"v":3.89e-12,"d":"3.89E-12"},7.93E-11,"Zinc-binding ribosomal protein family protein.","AT5G55050",null,83.502,-2.5488,0.41339,-6.1657,{"v":7.02e-10,"d":"7.02E-10"},{"v":1.42E-8,"d":"1.42E-08"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT2G47890",null,203.41,1.3739,0.2505,5.4845,{"v":4.15e-08,"d":"4.15E-08"},{"v":8.24e-07,"d":"8.24E-07"},"B-box type zinc finger protein with CCT domain-containing protein."]
["AT1G14210",null,316.13,-1.3317,0.19187,-6.9406,{"v":3.9e-12,"d":"3.90E-12"},{"v":7.94e-11,"d":"7.94E-11"},"Ribonuclease T2 family protein.","AT5G14450",null,9436.8,-0.5755,0.093396,-6.162,7.18E-10,{"v":1.46E-8,"d":"1.46E-08"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT2G16890",null,45.142,3.0289,0.55257,5.4816,{"v":4.22e-08,"d":"4.22E-08"},{"v":8.37e-07,"d":"8.37E-07"},"UDP-Glycosyltransferase superfamily protein."]
["AT5G58110",null,1025.3,0.93763,0.13511,6.9395,{"v":3.93e-12,"d":"3.93E-12"},{"v":7.99e-11,"d":"7.99E-11"},"chaperone binding / ATPase activator.","AT2G22170","PLAT2",1152.5,0.81862,0.13294,6.1577,{"v":7.38e-10,"d":"7.38E-10"},{"v":1.49e-08,"d":"1.49E-08"},"full_name=PLAT domain protein 2. Lipase/lipooxygenase, PLAT/LH2 family protein.","AT4G08850","MIK2",204.75,1.3337,0.24347,5.4781,{"v":4.3e-08,"d":"4.30E-08"},{"v":8.53e-07,"d":"8.53E-07"},"Leucine-rich repeat receptor-like protein kinase family protein."]
["AT3G01370","CFM2",721.13,1.0292,0.14838,6.9366,{"v":4.02e-12,"d":"4.02E-12"},{"v":8.15e-11,"d":"8.15E-11"},"full_name=CRM family member 2. CRM family member 2. Encodes a protein containing a CRM domain that is involved in group I and group II intron splicing.","AT1G77100",null,69.601,-9.1372,1.4844,-6.1555,7.48E-10,{"v":1.51E-8,"d":"1.51E-08"},"peroxidase superfamily protein.","AT2G38410",null,291.12,1.1668,0.21308,5.476,{"v":4.35e-08,"d":"4.35E-08"},{"v":8.62e-07,"d":"8.62E-07"},"ENTH/VHS/GAT family protein."]
["AT1G52100",null,76.844,3.5793,0.5163,6.9327,{"v":4.13e-12,"d":"4.13E-12"},{"v":8.37e-11,"d":"8.37E-11"},"Mannose-binding lectin superfamily protein.","AT2G39210","PIC30",150.61,-1.7721,0.28823,-6.1482,{"v":7.84e-10,"d":"7.84E-10"},{"v":1.58e-08,"d":"1.58E-08"},"Major facilitator superfamily protein.","AT3G16800","EGR3",31.748,8.4243,1.5386,5.4754,{"v":4.37e-08,"d":"4.37E-08"},{"v":8.64e-07,"d":"8.64E-07"},"Protein phosphatase 2C family protein."]
["AT1G58440","XF1",399.91,-1.3816,0.19929,-6.9326,{"v":4.13e-12,"d":"4.13E-12"},{"v":8.37e-11,"d":"8.37E-11"},"FAD/NAD(P)-binding oxidoreductase family protein. Encodes a putative protein that has been speculated, based on sequence similarities, to have squalene monooxygenase activity.","AT1G13170","ORP1D",531.23,0.9213,0.15,6.1418,{"v":8.16e-10,"d":"8.16E-10"},{"v":1.65e-08,"d":"1.65E-08"},"full_name=OSBP(oxysterol binding protein)-related protein 1D. OSBP(oxysterol binding protein)-related protein 1D.","AT1G14980","CPN10",606.23,-1.0465,0.19118,-5.4739,{"v":4.4e-08,"d":"4.40E-08"},{"v":8.7e-07,"d":"8.70E-07"},"full_name=chaperonin 10. chaperonin 10. Encodes mitochondrial-localized chaperonin 10 that complements the E.coli groES mutant. Its mRNA is upregulated in response to heat shock treatment and is expressed uniformly in various organs."]
["AT2G46750","GulLO2",106.79,-2.4258,0.35004,-6.9301,4.21E-12,{"v":8.51e-11,"d":"8.51E-11"},"full_name=L -gulono-1,4-lactone ( L -GulL) oxidase 2. D-arabinono-1,4-lactone oxidase family protein. Encodes a homolog of rat L-gulono-1,4-lactone (L-GulL) oxidase that is involved in the biosynthesis of L-ascorbic acid.","AT4G14930",null,449.93,-1.1763,0.19196,-6.1279,{"v":8.9e-10,"d":"8.90E-10"},{"v":1.79e-08,"d":"1.79E-08"},"Survival protein SurE-like phosphatase/nucleotidase.","AT5G07290","ML4",686.05,0.90877,0.1661,5.4712,{"v":4.47e-08,"d":"4.47E-08"},{"v":8.83e-07,"d":"8.83E-07"},"full_name=MEI2-like 4. MEI2-like 4. AML4 A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML4 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM14. AML4 is expressed during embryo development (heart and torpedo stage) and in vegetative and floral apices."]
["AT1G26560","BGLU40",204.71,-1.6248,0.2346,-6.926,{"v":4.33e-12,"d":"4.33E-12"},{"v":8.75e-11,"d":"8.75E-11"},"full_name=beta glucosidase 40. beta glucosidase 40.","AT4G26650",null,468.05,0.96341,0.15726,6.1262,{"v":9e-10,"d":"9.00E-10"},{"v":1.81E-8,"d":"1.81E-08"},"RNA-binding (RRM/RBD/RNP motifs) family protein.","AT3G52800",null,269.71,1.2018,0.21968,5.4709,{"v":4.48e-08,"d":"4.48E-08"},{"v":8.83e-07,"d":"8.83E-07"},"A20/AN1-like zinc finger family protein."]
["AT5G20635","AGG3",209.35,-1.5358,0.22191,-6.9209,{"v":4.49e-12,"d":"4.49E-12"},{"v":9.06e-11,"d":"9.06E-11"},"full_name=Arabidopsis G protein gamma subunit 3. guanine nucleotide-binding protein subunit gamma. Encodes an atypical heterotrimeric G-protein gamma-subunit involved in guard cell K+-channel regulation and morphological development.","AT4G15550","IAGLU",138.35,-1.7267,0.28224,-6.1176,{"v":9.5e-10,"d":"9.50E-10"},{"v":1.91e-08,"d":"1.91E-08"},"full_name=indole-3-acetate beta-D-glucosyltransferase. indole-3-acetate beta-D-glucosyltransferase. UDP-glucose:indole-3-acetate beta-D-glucosyltransferase","AT5G09980","PROPEP4",90.443,-1.9031,0.34787,-5.4707,{"v":4.48e-08,"d":"4.48E-08"},{"v":8.83e-07,"d":"8.83E-07"},"full_name=elicitor peptide 4 precursor. elicitor peptide 4 precursor."]
["AT4G34260","FUC95A",1302.6,-0.82548,0.11934,-6.917,{"v":4.61e-12,"d":"4.61E-12"},{"v":9.3e-11,"d":"9.30E-11"},"1,2-alpha-L-fucosidase.","AT5G37370","ATSRL1",347.49,1.8108,0.29602,6.1169,{"v":9.54e-10,"d":"9.54E-10"},{"v":1.92E-8,"d":"1.92E-08"},"PRP38 family protein. encodes a putative splicing factor. Over-expression in yeast and Arabidopsis result in increased tolerance to high salt.","AT5G38560","PERK8",357.85,1.052,0.19244,5.4669,{"v":4.58E-8,"d":"4.58E-08"},{"v":9.02E-7,"d":"9.02E-07"},"full_name=proline-rich extensin-like receptor kinase 8. Protein kinase superfamily protein. Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807)."]
["AT2G46210","SLD2",157.64,-2.0425,0.29532,-6.9163,{"v":4.64e-12,"d":"4.64E-12"},{"v":9.34e-11,"d":"9.34E-11"},"full_name=sphingoid LCB desaturase 2. Fatty acid/sphingolipid desaturase.","AT4G36910","LEJ2",1857.3,-0.65296,0.10681,-6.1135,{"v":9.74e-10,"d":"9.74E-10"},{"v":1.96E-8,"d":"1.96E-08"},"full_name=LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2. Cystathionine beta-synthase (CBS) family protein. Encodes a single cystathionine beta-synthase domain-containing protein. Modulates development by regulating the thioredoxin system.","AT5G42950","EXA1",1170.2,0.89693,0.16409,5.4662,{"v":4.6e-08,"d":"4.60E-08"},{"v":9.04e-07,"d":"9.04E-07"},"GYF domain-containing protein."]
["AT2G29340",null,423.29,-1.2595,0.18211,-6.916,{"v":4.65e-12,"d":"4.65E-12"},9.35E-11,"NAD-dependent epimerase/dehydratase family protein.","AT1G68570","NPF3.1",184.4,-1.9006,0.31102,-6.111,{"v":9.9e-10,"d":"9.90E-10"},{"v":1.98e-08,"d":"1.98E-08"},"Major facilitator superfamily protein.","AT3G56070","ROC2",629.69,-0.88619,0.16216,-5.4649,{"v":4.63e-08,"d":"4.63E-08"},{"v":9.1e-07,"d":"9.10E-07"},"full_name=rotamase cyclophilin 2. rotamase cyclophilin 2. rotamase cyclophilin 2 (ROC2) exhibiting peptidyl-prolyl cis-trans isomerase activity involved in signal transduction."]
["AT1G01720","ATAF1",1046.9,-0.85023,0.12296,-6.9147,{"v":4.69e-12,"d":"4.69E-12"},{"v":9.42e-11,"d":"9.42E-11"},"NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA.","AT5G61030","GR-RBP3",796.25,-0.81751,0.13379,-6.1104,{"v":9.94e-10,"d":"9.94E-10"},{"v":1.99E-8,"d":"1.99E-08"},"full_name=glycine-rich RNA-binding protein 3. glycine-rich RNA-binding protein 3. encodes a glycine-rich RNA binding protein. Gene expression is induced by cold.","AT3G47500","CDF3",149.96,1.5478,0.28326,5.4641,{"v":4.65e-08,"d":"4.65E-08"},{"v":9.13e-07,"d":"9.13E-07"},"full_name=cycling DOF factor 3. cycling DOF factor 3. Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions."]
["AT5G59970",null,241.16,1.4318,0.20719,6.9107,{"v":4.82e-12,"d":"4.82E-12"},{"v":9.69e-11,"d":"9.69E-11"},"Histone superfamily protein.","AT4G39710","PnsL4",66.731,2.3869,0.39091,6.1061,{"v":1.02E-9,"d":"1.02E-09"},{"v":2.04e-08,"d":"2.04E-08"},"full_name=Photosynthetic NDH subcomplex L 4. FK506-binding protein 16-2.","AT5G05890","UGT76C5",254.28,-1.2104,0.22166,-5.4605,{"v":4.75e-08,"d":"4.75E-08"},{"v":9.31e-07,"d":"9.31E-07"},"UDP-Glycosyltransferase superfamily protein."]
["AT1G70580","AOAT2",550.16,-1.3082,0.18953,-6.9026,{"v":5.11e-12,"d":"5.11E-12"},1.02E-10,"full_name=alanine-2-oxoglutarate aminotransferase 2. alanine-2-oxoglutarate aminotransferase 2. Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.","AT1G29470",null,1728.4,0.68907,0.11291,6.1029,{"v":1.04e-09,"d":"1.04E-09"},{"v":2.08e-08,"d":"2.08E-08"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT2G46900",null,614.43,1.0348,0.18954,5.4597,{"v":4.77e-08,"d":"4.77E-08"},{"v":9.34e-07,"d":"9.34E-07"},"transcription factor-like protein."]
["AT3G54340","AP3",295.18,-1.2969,0.18797,-6.8996,5.22E-12,1.05E-10,"full_name=APETALA 3. K-box region and MADS-box transcription factor family protein. Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies petal and stamen identities. Associates with PISTILLATA.","AT5G20790",null,53.318,-3.1675,0.51925,-6.1002,{"v":1.06e-09,"d":"1.06E-09"},{"v":2.11E-8,"d":"2.11E-08"},"transmembrane protein.","AT1G18740","B1L",118.78,1.8068,0.33097,5.4591,{"v":4.79e-08,"d":"4.79E-08"},{"v":9.36e-07,"d":"9.36E-07"},"ROH1, putative (DUF793)."]
["AT4G27860","MEB1",709.64,0.94634,0.13721,6.8972,{"v":5.3e-12,"d":"5.30E-12"},1.06E-10,"full_name=MEMBRANE OF ER BODY 1. vacuolar iron transporter (VIT) family protein.","AT3G16990",null,316.1,-1.4748,0.24198,-6.0947,{"v":1.1e-09,"d":"1.10E-09"},{"v":2.19e-08,"d":"2.19E-08"},"heme oxygenase-like, multi-helical.","AT5G23420","HMGB6",147.48,-1.5212,0.27881,-5.456,{"v":4.87e-08,"d":"4.87E-08"},{"v":9.51e-07,"d":"9.51E-07"},"full_name=high-mobility group box 6. high-mobility group box 6. Encodes HMGB6, a protein belonging to the subgroup of HMGB (high mobility group B) proteins. Localized in the nucleus. Binds to supercoiled DNA in vitro. HMGB6 is phosphorylated by protein kinase CK2alpha within its acidic C-terminal domain."]
["AT5G08680",null,2112.5,0.77457,0.11232,6.8962,{"v":5.34e-12,"d":"5.34E-12"},{"v":1.07e-10,"d":"1.07E-10"},"ATP synthase alpha/beta family protein. Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.","AT2G14100","CYP705A13",58.197,3.1043,0.50992,6.0878,{"v":1.14E-9,"d":"1.14E-09"},{"v":2.28e-08,"d":"2.28E-08"},"full_name=cytochrome P450, family 705, subfamily A, polypeptide 13. cytochrome P450, family 705, subfamily A, polypeptide 13. a member of the cytochrome P450 family","AT5G11650","MAGL13",157.16,1.5012,0.2755,5.4489,{"v":5.07e-08,"d":"5.07E-08"},{"v":9.89e-07,"d":"9.89E-07"},"alpha/beta-Hydrolases superfamily protein."]
["AT1G19600",null,1141.7,0.78926,0.11446,6.8952,{"v":5.38e-12,"d":"5.38E-12"},{"v":1.07e-10,"d":"1.07E-10"},"pfkB-like carbohydrate kinase family protein.","AT5G13990","EXO70C2",36.672,4.0003,0.65715,6.0874,{"v":1.15E-9,"d":"1.15E-09"},{"v":2.28e-08,"d":"2.28E-08"},"full_name=exocyst subunit exo70 family protein C2. exocyst subunit exo70 family protein C2. A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.","AT1G63120","RBL2",280.27,1.1485,0.21081,5.4481,{"v":5.09e-08,"d":"5.09E-08"},{"v":9.93e-07,"d":"9.93E-07"},"full_name=RHOMBOID-like 2. RHOMBOID-like 2. AtRBL2 has been identified as a rhomboid protein involved in regulated intramembrane proteolysis (RIP). The enzyme has the proteolytic activity and substrate specificity comparable to the Drosophila Rho-1 protein."]
["AT1G26770","EXPA10",663.12,-1.4678,0.21301,-6.8906,{"v":5.56e-12,"d":"5.56E-12"},1.11E-10,"full_name=expansin A10. expansin A10. Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","AT1G04310","ERS2",284.54,-1.3685,0.22507,-6.08,{"v":1.2E-9,"d":"1.20E-09"},{"v":2.39e-08,"d":"2.39E-08"},"full_name=ethylene response sensor 2. ethylene response sensor 2. encodes an ethylene receptor related to bacterial two-component histidine kinases.","AT5G56030","HSP81-2",3551.3,0.7633,0.14013,5.4471,{"v":5.12e-08,"d":"5.12E-08"},{"v":9.97e-07,"d":"9.97E-07"},"full_name=heat shock protein 81-2. heat shock protein 81-2. A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c."]
["AT2G21370","XK-1",88.217,2.7573,0.40023,6.8892,{"v":5.61e-12,"d":"5.61E-12"},1.12E-10,"full_name=xylulose kinase-1. xylulose kinase-1. Although this gene has a sequence similar to xylulose kinases, several lines of experimental evidence suggest that it does not act on xylulose or deoxy-xylulose.","AT2G39350","ABCG1",113.29,1.7994,0.29626,6.0737,{"v":1.25E-9,"d":"1.25E-09"},{"v":2.48E-8,"d":"2.48E-08"},"full_name=ATP-binding cassette G1. ABC-2 type transporter family protein. Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16).","AT5G15450","CLPB3",1022.8,0.82748,0.15198,5.4445,{"v":5.19e-08,"d":"5.19E-08"},{"v":1.01e-06,"d":"1.01E-06"},"full_name=casein lytic proteinase B3. casein lytic proteinase B3. Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype."]
["AT4G27450",null,10224,-2.2377,0.32483,-6.8888,5.63E-12,1.12E-10,"aluminum induced protein with YGL and LRDR motifs.","AT1G35190",null,343.15,-1.2172,0.20042,-6.0733,{"v":1.25E-9,"d":"1.25E-09"},{"v":2.49e-08,"d":"2.49E-08"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT2G41900","OXS2",255.41,-1.2097,0.22232,-5.4414,{"v":5.29e-08,"d":"5.29E-08"},{"v":1.03e-06,"d":"1.03E-06"},"full_name=OXIDATIVE STRESS 2. CCCH-type zinc finger protein with ARM repeat domain-containing protein."]
["AT3G48110","EDD1",794.57,0.97759,0.14195,6.8871,{"v":5.7e-12,"d":"5.70E-12"},1.13E-10,"full_name=EMBRYO-DEFECTIVE-DEVELOPMENT 1. glycine-tRNA ligase. glycine-tRNA ligase","AT4G21445","CRR9",35.034,5.496,0.90501,6.0729,{"v":1.26E-9,"d":"1.26E-09"},{"v":2.49e-08,"d":"2.49E-08"},"receptor-interacting protein.","AT2G28910","CXIP4",1456.3,1.0065,0.18502,5.4399,{"v":5.33e-08,"d":"5.33E-08"},{"v":1.04E-6,"d":"1.04E-06"},"full_name=CAX interacting protein 4. CAX interacting protein 4. Encodes a CAX-interacting protein (CXIP4). The gene product is located in the nucleus of GFP-CXIP4-expressing yeast cells. When transiently expressed in the tobacco leaves, GFP-CXIP4 locates to the nucleus as well as in discrete areas of the cytoplasm (which do not overlap with mitochondria)."]
["AT1G64190","PGD1",904.96,-1.0024,0.14558,-6.8856,{"v":5.75e-12,"d":"5.75E-12"},{"v":1.14e-10,"d":"1.14E-10"},"6-phosphogluconate dehydrogenase family protein.","AT2G04520",null,1361.5,-0.71754,0.11816,-6.0728,{"v":1.26E-9,"d":"1.26E-09"},{"v":2.49e-08,"d":"2.49E-08"},"Nucleic acid-binding, OB-fold-like protein.","AT2G47400","CP12-1",2913.8,0.94847,0.17436,5.4396,{"v":5.34e-08,"d":"5.34E-08"},{"v":1.04E-6,"d":"1.04E-06"},"full_name=CP12 domain-containing protein 1. CP12 domain-containing protein 1. CP12-1 encodes a small peptide found in the chloroplast stroma. It belongs to the CP12 gene family thought to be involved in the formation of a supramolecular complex with glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK) embedded in the Calvin cycle."]
["AT4G12910","scpl20",293.02,1.7789,0.2584,6.8845,{"v":5.8e-12,"d":"5.80E-12"},1.15E-10,"full_name=serine carboxypeptidase-like 20. serine carboxypeptidase-like 20.","AT1G70210","CYCD1;1",146.71,1.663,0.27392,6.0711,{"v":1.27E-9,"d":"1.27E-09"},{"v":2.51E-8,"d":"2.51E-08"},"full_name=CYCLIN D1;1. CYCLIN D1;1. Encodes a D-type cyclin that physically interacts with CDC2A. Its expression is upregulated early during germination.","AT3G04790","EMB3119",310.9,-1.1185,0.20569,-5.4381,{"v":5.39E-8,"d":"5.39E-08"},{"v":1.04E-6,"d":"1.04E-06"},"full_name=EMBRYO DEFECTIVE 3119. Ribose 5-phosphate isomerase, type A protein."]
["AT3G57520","SIP2",5180.2,1.1191,0.16256,6.8843,{"v":5.81e-12,"d":"5.81E-12"},1.15E-10,"full_name=seed imbibition 2. seed imbibition 2. SIP2 encodes a raffinose-specific alpha-galactosidase that catalyzes the breakdown of raffinose into alpha-galatose and sucrose. This enzyme may function in unloading raffinose from the phloem as part of sink metabolism. Although it was originally predicted to act as a raffinose synthase (RS), that activity was not observed for recombinant SIP2.","AT5G46180","DELTA-OAT",2473.1,-0.68306,0.11254,-6.0695,{"v":1.28e-09,"d":"1.28E-09"},{"v":2.53e-08,"d":"2.53E-08"},"full_name=ornithine-delta-aminotransferase. ornithine-delta-aminotransferase. Encodes an ornithine delta-aminotransferase that is transcriptionally up-regulated in young seedlings and in response to salt stress. It is unlikely to play a role in salt-stress-induced proline accumulation, however, it appears to participate in arginine and ornithine catabolism.","AT5G04410","NAC2",686.77,0.84739,0.15589,5.4359,{"v":5.45e-08,"d":"5.45E-08"},{"v":1.06E-6,"d":"1.06E-06"},"full_name=NAC domain containing protein 2. NAC domain containing protein 2. NAC family member, functions as a transcriptional activator, regulates flavonoid biosynthesis under high light."]
["AT4G04770","ABCI8",853.2,0.8719,0.12666,6.8839,{"v":5.82e-12,"d":"5.82E-12"},1.15E-10,"full_name=ATP-binding cassette I8. ATP binding cassette protein 1. Encodes an iron-stimulated ATPase. A member of the NAP subfamily of ABC transporters. Involved in Fe-S cluster assembly. Similar to SufB. Involved in the regulation of iron homeostasis. Able to form homodimers. Interacts with AtNAP7 inside the chloroplast.","AT1G27210",null,229.41,1.3765,0.22682,6.0685,{"v":1.29e-09,"d":"1.29E-09"},{"v":2.55E-8,"d":"2.55E-08"},"ARM repeat superfamily protein.","AT1G56330","SAR1B",539.98,-0.92701,0.17056,-5.4351,{"v":5.48e-08,"d":"5.48E-08"},{"v":1.06E-6,"d":"1.06E-06"},"full_name=secretion-associated RAS 1B. secretion-associated RAS 1B. Encodes a small GTP-binding protein implicated in ER to cis-Golgi transport of other proteins. A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. The protein is found associated to the ER and free in the cytosol."]
["AT4G24130",null,274.61,-1.7349,0.25209,-6.8819,{"v":5.9e-12,"d":"5.90E-12"},{"v":1.17e-10,"d":"1.17E-10"},"DUF538 family protein (Protein of unknown function, DUF538).","AT1G55110","IDD7",536.76,-0.96834,0.15968,-6.0644,{"v":1.32E-9,"d":"1.32E-09"},{"v":2.61e-08,"d":"2.61E-08"},"full_name=indeterminate(ID)-domain 7. indeterminate(ID)-domain 7.","AT3G09850",null,674.8,0.94075,0.17322,5.4309,{"v":5.61e-08,"d":"5.61E-08"},{"v":1.08E-6,"d":"1.08E-06"},"D111/G-patch domain-containing protein."]
["AT5G61170",null,2388.4,0.63983,0.093081,6.8739,{"v":6.25e-12,"d":"6.25E-12"},{"v":1.23e-10,"d":"1.23E-10"},"Ribosomal protein S19e family protein.","AT5G20940",null,45.118,-3.9988,0.65948,-6.0636,{"v":1.33E-9,"d":"1.33E-09"},{"v":2.62E-8,"d":"2.62E-08"},"Glycosyl hydrolase family protein.","AT4G18970",null,263.8,-1.2042,0.22176,-5.4303,{"v":5.63e-08,"d":"5.63E-08"},{"v":1.09e-06,"d":"1.09E-06"},"GDSL-like Lipase/Acylhydrolase superfamily protein."]
["AT1G73120",null,2484.1,0.88453,0.12894,6.8603,{"v":6.87e-12,"d":"6.87E-12"},1.36E-10,"F-box/RNI superfamily protein.","AT1G08630","THA1",331.91,-1.3921,0.22963,-6.0624,{"v":1.34e-09,"d":"1.34E-09"},{"v":2.64e-08,"d":"2.64E-08"},"full_name=threonine aldolase 1. threonine aldolase 1. Encodes a threonine aldolase, involved in threonine degradation to glycine. Primarily expressed in seeds and seedlings.","AT2G19670","PRMT1A",64.676,-2.3401,0.43112,-5.4279,{"v":5.7e-08,"d":"5.70E-08"},{"v":1.1e-06,"d":"1.10E-06"},"full_name=protein arginine methyltransferase 1A. protein arginine methyltransferase 1A."]
["AT1G70200","RBD1",735.21,0.91984,0.13417,6.8558,{"v":7.09e-12,"d":"7.09E-12"},{"v":1.4e-10,"d":"1.40E-10"},"RNA-binding (RRM/RBD/RNP motifs) family protein.","AT1G15550","GA3OX1",37.382,3.6582,0.60353,6.0613,{"v":1.35e-09,"d":"1.35E-09"},{"v":2.65e-08,"d":"2.65E-08"},"full_name=gibberellin 3-oxidase 1. gibberellin 3-oxidase 1. Involved in later steps of the gibberellic acid biosynthetic pathway. Activated by AGAMOUS in a cal-1, ap1-1 background. Deletion of 208 bp from -1016 to -809 (&#916;-808) resulted in loss of GA-negative feedback (this sequence, which contains a 43-bp sequence GNFEI, was shown to be sufficient for GA-negative feedback).","AT5G57490","VDAC4",308.22,-1.1271,0.20766,-5.4275,{"v":5.72e-08,"d":"5.72E-08"},{"v":1.1e-06,"d":"1.10E-06"},"full_name=voltage dependent anion channel 4. voltage dependent anion channel 4. Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol."]
["AT5G67360","ARA12",7328.4,0.77009,0.11233,6.8553,{"v":7.12e-12,"d":"7.12E-12"},{"v":1.4e-10,"d":"1.40E-10"},"Subtilase family protein. Encodes a subtilisin-like serine protease essential for mucilage release from seed coats.","AT3G12145","FLR1",531.04,-1.3976,0.23063,-6.0602,{"v":1.36e-09,"d":"1.36E-09"},{"v":2.67e-08,"d":"2.67E-08"},"full_name=FLOR1. Leucine-rich repeat (LRR) family protein. A novel leucine-rich repeat protein. Interacts directly with MADS domain transcription factor.","AT1G47600","BGLU34",30.953,8.3915,1.5466,5.4259,{"v":5.77e-08,"d":"5.77E-08"},{"v":1.11E-6,"d":"1.11E-06"},"full_name=beta glucosidase 34. beta glucosidase 34. Encodes a myrosinase. Over-expression led to a glucosinolate profile change."]
["AT5G02450",null,3277.9,0.70145,0.10237,6.8523,{"v":7.27e-12,"d":"7.27E-12"},1.43E-10,"Ribosomal protein L36e family protein.","AT5G05170","CEV1",2676.3,0.63028,0.1041,6.0546,{"v":1.41e-09,"d":"1.41E-09"},{"v":2.76e-08,"d":"2.76E-08"},"full_name=CONSTITUTIVE EXPRESSION OF VSP 1. Cellulose synthase family protein. Encodes a cellulose synthase isomer. CESA3 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA3, along with CESA1 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. The xylem cells in primary root have reduced cell expansion and higher than normal lignification.","AT1G50250","FTSH1",673.94,0.90844,0.16743,5.4257,{"v":5.77e-08,"d":"5.77E-08"},{"v":1.11E-6,"d":"1.11E-06"},"full_name=FTSH protease 1. FTSH protease 1. encodes an FTSH protease that is localized to the chloroplast. Involved in the D1 repair cycle of Photosystem II. FtsH1 and FtsH5 are interchangeable in thylakoid membranes."]
["AT1G32700",null,574.36,-1.1054,0.16133,-6.852,{"v":7.28e-12,"d":"7.28E-12"},1.43E-10,"PLATZ transcription factor family protein.","AT1G03420","Sadhu4-2",95.665,2.0049,0.33122,6.053,{"v":1.42e-09,"d":"1.42E-09"},{"v":2.78e-08,"d":"2.78E-08"},"full_name=sadhu non-coding retrotransposon 4-2. transposable_element_gene. Member of Sadhu non-coding retrotransposon family","AT4G33550",null,103.13,1.799,0.3316,5.4253,{"v":5.79e-08,"d":"5.79E-08"},{"v":1.11E-6,"d":"1.11E-06"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein."]
["AT5G65360","H3.1",373.56,1.1789,0.17208,6.8509,{"v":7.34e-12,"d":"7.34E-12"},{"v":1.44e-10,"d":"1.44E-10"},"Histone superfamily protein.","AT1G01790","KEA1",218.85,1.304,0.21546,6.0521,{"v":1.43E-9,"d":"1.43E-09"},{"v":2.8e-08,"d":"2.80E-08"},"full_name=K+ efflux antiporter 1. K+ efflux antiporter 1. K efflux antiporter KEA1","AT4G34420",null,45.848,-2.9747,0.54858,-5.4225,{"v":5.88e-08,"d":"5.88E-08"},{"v":1.13E-6,"d":"1.13E-06"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein."]
["AT1G31950",null,58.394,3.3694,0.49202,6.8481,{"v":7.48e-12,"d":"7.48E-12"},{"v":1.47e-10,"d":"1.47E-10"},"Terpenoid cyclases/Protein prenyltransferases superfamily protein.","AT5G08160","PK3",537.72,0.93015,0.1538,6.0476,{"v":1.47e-09,"d":"1.47E-09"},{"v":2.87e-08,"d":"2.87E-08"},"full_name=serine/threonine protein kinase 3. serine/threonine protein kinase 3. Encodes a serine/threonine protein kinase.","AT5G64210","AOX2",123.95,1.7506,0.32302,5.4196,{"v":5.97e-08,"d":"5.97E-08"},{"v":1.14e-06,"d":"1.14E-06"},"full_name=alternative oxidase 2. alternative oxidase 2. encodes an isoform of alternative oxidase, which is expressed in rosettes, stems, and roots. Transcript accumulates in dry seeds and decreased upon germination and is not affected by actinomycin A. Protein is localized to mitochondria."]
["AT4G18440",null,825.17,0.95875,0.14013,6.8418,{"v":7.82e-12,"d":"7.82E-12"},{"v":1.53e-10,"d":"1.53E-10"},"L-Aspartase-like family protein.","AT5G52330",null,99.076,-2.016,0.33347,-6.0455,{"v":1.49E-9,"d":"1.49E-09"},{"v":2.91e-08,"d":"2.91E-08"},"TRAF-like superfamily protein.","AT3G23730","XTH16",61.93,-2.3993,0.44281,-5.4184,{"v":6.01e-08,"d":"6.01E-08"},{"v":1.15E-6,"d":"1.15E-06"},"full_name=xyloglucan endotransglucosylase/hydrolase 16. xyloglucan endotransglucosylase/hydrolase 16."]
["AT1G29400","ML5",1650.7,-0.74234,0.10851,-6.841,{"v":7.86e-12,"d":"7.86E-12"},{"v":1.54e-10,"d":"1.54E-10"},"full_name=MEI2-like protein 5. MEI2-like protein 5. A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.","AT1G17830",null,402.74,-1.104,0.18284,-6.0382,{"v":1.56E-9,"d":"1.56E-09"},{"v":3.04e-08,"d":"3.04E-08"},"hypothetical protein (DUF789).","AT3G24500","MBF1C",140.07,1.8856,0.34802,5.418,{"v":6.03e-08,"d":"6.03E-08"},{"v":1.15E-6,"d":"1.15E-06"},"full_name=multiprotein bridging factor 1C. multiprotein bridging factor 1C. One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is specifically elevated in response to pathogen infection, salinity, drought, heat, hydrogen peroxide, and application of abscisic acid or salicylic acid. Constitutive expression enhances the tolerance of transgenic plants to various biotic and abiotic stresses."]
["AT3G09500",null,4890.6,0.54252,0.079309,6.8406,{"v":7.88e-12,"d":"7.88E-12"},{"v":1.54e-10,"d":"1.54E-10"},"Ribosomal L29 family protein.","AT4G36040","J11",266.41,-1.2717,0.21069,-6.0358,{"v":1.58e-09,"d":"1.58E-09"},{"v":3.08e-08,"d":"3.08E-08"},"full_name=DnaJ11. Chaperone DnaJ-domain superfamily protein.","AT2G38010","ATNCER2",182.48,1.6064,0.29662,5.4158,{"v":6.1e-08,"d":"6.10E-08"},{"v":1.17E-6,"d":"1.17E-06"},"Neutral/alkaline non-lysosomal ceramidase."]
["AT5G01800",null,441.72,-1.0789,0.15775,-6.8392,{"v":7.96e-12,"d":"7.96E-12"},1.56E-10,"saposin B domain-containing protein.","AT4G03400","DFL2",286.17,-1.3155,0.21796,-6.0355,{"v":1.58e-09,"d":"1.58E-09"},{"v":3.08e-08,"d":"3.08E-08"},"full_name=DWARF IN LIGHT 2. Auxin-responsive GH3 family protein. Encodes a GH3-related gene involved in red light-specific hypocotyl elongation. Analysis of sense and antisense transgenic plants suggests that DFL2 is located downstream of red light signal transduction and determines the degree of hypocotyl elongation.","AT2G38230","PDX1.1",2607.7,1.0504,0.19398,5.4149,{"v":6.13E-8,"d":"6.13E-08"},{"v":1.17E-6,"d":"1.17E-06"},"full_name=pyridoxine biosynthesis 1.1. pyridoxine biosynthesis 1.1. Encodes a protein predicted to function in tandem with PDX2 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis."]
["AT3G53740",null,4073.6,0.73245,0.10713,6.837,{"v":8.09e-12,"d":"8.09E-12"},1.58E-10,"Ribosomal protein L36e family protein.","AT2G41730",null,48.643,-3.7583,0.62291,-6.0335,{"v":1.6e-09,"d":"1.60E-09"},{"v":3.12e-08,"d":"3.12E-08"},"calcium-binding site protein.","AT2G26440","PME12",137.16,-1.5532,0.2869,-5.4138,{"v":6.17e-08,"d":"6.17E-08"},{"v":1.18e-06,"d":"1.18E-06"},"Plant invertase/pectin methylesterase inhibitor superfamily."]
["AT3G05140","RBK2",60.441,-3.1778,0.4649,-6.8354,{"v":8.18e-12,"d":"8.18E-12"},{"v":1.59e-10,"d":"1.59E-10"},"full_name=ROP binding protein kinases 2. ROP binding protein kinases 2.","AT3G53670",null,943.22,1.0984,0.18211,6.0316,{"v":1.62E-9,"d":"1.62E-09"},{"v":3.15e-08,"d":"3.15E-08"},"hypothetical protein.","AT5G16550","LDIP",287.29,1.2552,0.23186,5.4135,{"v":6.18e-08,"d":"6.18E-08"},{"v":1.18e-06,"d":"1.18E-06"},"voltage-dependent L-type calcium channel subunit."]
["AT1G01470","LEA14",842.12,0.92085,0.13477,6.833,{"v":8.31e-12,"d":"8.31E-12"},{"v":1.62e-10,"d":"1.62E-10"},"full_name=LATE EMBRYOGENESIS ABUNDANT 14. Late embryogenesis abundant protein. Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against dessication.","AT5G63140","PAP29",114.49,1.8707,0.31034,6.0278,{"v":1.66e-09,"d":"1.66E-09"},{"v":3.23e-08,"d":"3.23E-08"},"full_name=purple acid phosphatase 29. purple acid phosphatase 29.","AT1G70300","KUP6",198.57,1.4333,0.26482,5.4123,{"v":6.22e-08,"d":"6.22E-08"},{"v":1.18e-06,"d":"1.18E-06"},"full_name=K+ uptake permease 6. K+ uptake permease 6. potassium transporter"]
["AT3G03710","RIF10",760.34,0.95771,0.1402,6.8309,{"v":8.44e-12,"d":"8.44E-12"},1.64E-10,"full_name=resistant to inhibition with FSM 10. polyribonucleotide nucleotidyltransferase. Encodes a chloroplast polynucleotide phosphorylase (PNPase). Involved in response to phosphorus (P) starvation. Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings.","AT1G24530",null,114.75,-1.9008,0.31567,-6.0215,{"v":1.73E-9,"d":"1.73E-09"},{"v":3.35e-08,"d":"3.35E-08"},"Transducin/WD40 repeat-like superfamily protein.","AT1G72970","HTH",390.69,-1.006,0.18596,-5.4097,{"v":6.31e-08,"d":"6.31E-08"},{"v":1.2e-06,"d":"1.20E-06"},"full_name=HOTHEAD. Glucose-methanol-choline (GMC) oxidoreductase family protein. Originally identified as a mutation that causes floral organs to fuse together. About 10-20% of mutants also have defects in ovules. Mutants have reduced fertility most likely as because of fusions that pistil emergence. The protein has similarity to the mandelonitrile lyase family of FAD containing oxidoreductases and is predicted to be secreted (SignalP).It is expressed in all tissue layers of roots, inflorescences, stems, leaves, and flowers and is also expressed in siliques. Expression is highest in inflorescence and flower tissue.Transmission of mutant alleles to the progeny shows non mendelian segregation- a percentage of mutant alleles revert back to a previous parental (e.g. grandparental) wild type allele. It has been suggested that an RNA template driven or other extra-DNA genomic mechanism may be responsible for the non-mendelian inheritance of HTH. Reversion events in alleles at other loci have also been observed to occur in plants with an hth mutant background indicating a genome wide effect."]
["AT2G19480","NAP1;2",3932.5,0.5647,0.082671,6.8307,{"v":8.45e-12,"d":"8.45E-12"},1.64E-10,"full_name=nucleosome assembly protein 1;2. nucleosome assembly protein 1;2. This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation.","AT3G02470","SAMDC",7007.5,-0.55513,0.092312,-6.0136,{"v":1.81E-9,"d":"1.81E-09"},{"v":3.51e-08,"d":"3.51E-08"},"full_name=S-adenosylmethionine decarboxylase. S-adenosylmethionine decarboxylase. Encodes a S-adenosylmethionine decarboxylase involved in polyamine biosynthesis.","AT5G65410","HB25",270.89,-1.1716,0.21669,-5.4068,{"v":6.42e-08,"d":"6.42E-08"},{"v":1.22E-6,"d":"1.22E-06"},"full_name=homeobox protein 25. homeobox protein 25. Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family."]
["AT4G28660","PSB28",1499.4,-0.80471,0.11785,-6.8283,{"v":8.59e-12,"d":"8.59E-12"},{"v":1.67e-10,"d":"1.67E-10"},"full_name=photosystem II reaction center PSB28 protein. photosystem II reaction center PSB28 protein. Similar to PsbW subunit of photosystem II.","AT1G14700","PAP3",128.72,2.0274,0.3373,6.0108,{"v":1.85E-9,"d":"1.85E-09"},{"v":3.57e-08,"d":"3.57E-08"},"full_name=purple acid phosphatase 3. purple acid phosphatase 3.","AT3G46230","HSP17.4",57.926,2.6531,0.49079,5.4058,{"v":6.45e-08,"d":"6.45E-08"},{"v":1.22E-6,"d":"1.22E-06"},"full_name=heat shock protein 17.4. heat shock protein 17.4. member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds"]
["AT2G45470","FLA8",1246.5,-0.78849,0.1155,-6.8267,{"v":8.69e-12,"d":"8.69E-12"},{"v":1.69e-10,"d":"1.69E-10"},"full_name=FASCICLIN-like arabinogalactan protein 8. FASCICLIN-like arabinogalactan protein 8.","AT1G74950","TIFY10B",607.57,-1.3327,0.22177,-6.0094,{"v":1.86E-9,"d":"1.86E-09"},{"v":3.6e-08,"d":"3.60E-08"},"TIFY domain/Divergent CCT motif family protein.","AT2G47850",null,289.47,1.1656,0.21566,5.4049,{"v":6.49e-08,"d":"6.49E-08"},{"v":1.23e-06,"d":"1.23E-06"},"Zinc finger C-x8-C-x5-C-x3-H type family protein."]
["AT3G15990","SULTR3;4",419.64,-1.4903,0.21835,-6.8255,{"v":8.76e-12,"d":"8.76E-12"},{"v":1.7e-10,"d":"1.70E-10"},"full_name=sulfate transporter 3;4. sulfate transporter 3;4. Encodes sulfate transporter Sultr3;4.","AT2G44160","MTHFR2",697.22,0.8653,0.14401,6.0087,{"v":1.87E-9,"d":"1.87E-09"},{"v":3.61e-08,"d":"3.61E-08"},"full_name=methylenetetrahydrofolate reductase 2. methylenetetrahydrofolate reductase 2. methylenetetrahydrofolate reductase MTHFR2 mRNA, complete","AT1G24735",null,318.61,1.2016,0.22246,5.4011,{"v":6.62e-08,"d":"6.62E-08"},{"v":1.25e-06,"d":"1.25E-06"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein."]
["AT5G09590","MTHSC70-2",2732.5,0.68735,0.10072,6.8243,{"v":8.84e-12,"d":"8.84E-12"},1.71E-10,"full_name=mitochondrial HSO70 2. mitochondrial HSO70 2. heat shock protein 70 (Hsc70-5); nuclear","AT3G09270","GSTU8",134.92,1.8206,0.303,6.0085,{"v":1.87E-9,"d":"1.87E-09"},{"v":3.61e-08,"d":"3.61E-08"},"full_name=glutathione S-transferase TAU 8. glutathione S-transferase TAU 8. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","AT4G16450",null,646.68,-0.86828,0.16078,-5.4006,{"v":6.64e-08,"d":"6.64E-08"},{"v":1.26E-6,"d":"1.26E-06"},"NADH-ubiquinone oxidoreductase."]
["AT1G43650","UMAMIT22",51.452,-4.1849,0.61331,-6.8235,{"v":8.89e-12,"d":"8.89E-12"},1.72E-10,"full_name=Usually multiple acids move in and out Transporters 22. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT3G52230",null,1117,-0.82958,0.13811,-6.0068,{"v":1.89e-09,"d":"1.89E-09"},{"v":3.64e-08,"d":"3.64E-08"},"hypothetical protein.","AT4G37740","GRF2",121.27,-1.6488,0.30584,-5.391,{"v":7.01e-08,"d":"7.01E-08"},{"v":1.32e-06,"d":"1.32E-06"},"full_name=growth-regulating factor 2. growth-regulating factor 2. Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower"]
["AT5G62220","GT18",304.83,1.3162,0.19292,6.8224,{"v":8.95e-12,"d":"8.95E-12"},1.73E-10,"full_name=glycosyltransferase 18. glycosyltransferase 18. Encodes a Golgi apparatus-localized galactosyltransferase involved in galactosyl-substitution of xyloglucan at position 2.","AT5G13490","AAC2",643.15,-0.90277,0.1503,-6.0063,{"v":1.9e-09,"d":"1.90E-09"},{"v":3.65e-08,"d":"3.65E-08"},"full_name=ADP/ATP carrier 2. ADP/ATP carrier 2. Encodes mitochondrial ADP/ATP carrier","AT4G28300","FLOE1",495.67,0.93141,0.17283,5.3891,{"v":7.08e-08,"d":"7.08E-08"},{"v":1.34e-06,"d":"1.34E-06"},"formin-like protein (DUF1421). Encodes a protein with 13.6% proline amino acids that is predicted to localize to the cell wall."]
["AT1G80310","MOT2",115.73,2.2063,0.32352,6.8199,{"v":9.11e-12,"d":"9.11E-12"},{"v":1.76e-10,"d":"1.76E-10"},"full_name=molybdate transporter 2. sulfate transmembrane transporter. MOT2 encodes a molybdate transporter which locates to the vacuolar membrane. Loss-of-function (knock out) mutants show elevated molydate levels in rosette leaves and in fully senescent leaves, but decreased MoO4 levels in seeds. Under conditions of molybdate deficiency leaves from mot2::tDNA mutants show strongly reduced nitrate reductase activity. The mot2 gene is slightly expressed in young and mature leaves, but strongly in senescing leaves. This observation points to a function of MOT2 in molybdate transfer from leaves to seeds during plant senescence.","AT3G15720",null,41.222,3.779,0.62924,6.0057,{"v":1.91e-09,"d":"1.91E-09"},{"v":3.66e-08,"d":"3.66E-08"},"Pectin lyase-like superfamily protein.","AT1G21410","SKP2A",121.11,1.6425,0.30496,5.3861,{"v":7.2e-08,"d":"7.20E-08"},{"v":1.36e-06,"d":"1.36E-06"},"F-box/RNI-like superfamily protein. AtSKP2;1 is a homolog of human SKP2, the human F-box protein that recruits E2F1. Contains an F-box motif at the N-terminal region and a C-terminal Leu-rich repeat domain. Forms part of an E3-ubiquitin-ligase SCF (Skp1, cullin, F-box) complex and recruits phosphorylated AtE2Fc, a transcriptional factor that might play a role in cell division and during the transition from skotomorphogenesis to photomorphogenesis. AtSKP2;1 (At1g21410) and AtSKP2;2 (At1g77000) may be duplicated genes."]
["AT3G02040","SRG3",341.44,-1.3577,0.19917,-6.8172,{"v":9.29e-12,"d":"9.29E-12"},1.79E-10,"full_name=senescence-related gene 3. senescence-related gene 3. Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family. Has glycerophosphodiester phosphodiesterase activity. Functions in maintaining cellular phosphate homeostasis under phosphate starvation.","AT3G55630","DFD",31.087,4.5438,0.75665,6.0052,{"v":1.91e-09,"d":"1.91E-09"},{"v":3.67e-08,"d":"3.67E-08"},"full_name=DHFS-FPGS homolog D. DHFS-FPGS homolog D. Encodes one of the three folylpolyglutamate synthetase isoforms (FPGSs): FPGS1 (At5g05980, plastidic), FPGS2 (At3g10160, mitochondrial) and FPGS3 (At3g55630, cytosolic).","AT3G06670","SMEK1",689.58,0.86126,0.15995,5.3845,{"v":7.27e-08,"d":"7.27E-08"},{"v":1.37E-6,"d":"1.37E-06"},"binding protein."]
["AT1G14170",null,389.9,-1.4831,0.21762,-6.815,9.43E-12,{"v":1.82e-10,"d":"1.82E-10"},"RNA-binding KH domain-containing protein.","AT2G36880","MAT3",900.04,0.79116,0.13186,6.0002,{"v":1.97E-9,"d":"1.97E-09"},{"v":3.78e-08,"d":"3.78E-08"},"full_name=methionine adenosyltransferase 3. methionine adenosyltransferase 3.","AT1G66270","BGLU21",6566.8,-0.72703,0.13519,-5.378,{"v":7.53e-08,"d":"7.53E-08"},{"v":1.42E-6,"d":"1.42E-06"},"Glycosyl hydrolase superfamily protein. BGLU21 encodes a beta-glucosidase that has a high level of activity against the naturally occuring secondary metabolite scopolin. Recombinant BGLU21 produced in insect cells shows lower levels of activity using the structurally similar substrates esculin (33%) and 4-MU-glucoside (9%). BGLU21 is glycosylated in planta and has a C-terminal ER retention signal. Transcript analysis as well as protein extraction and western blotting from various plant organs suggest that BGLU21 is only present in roots and seedlings. Transcript levels increase in response to cold, auxin (2,4-D), and methyl jasmonate treatments."]
["AT1G01540",null,792.88,-0.88811,0.13033,-6.8143,{"v":9.47e-12,"d":"9.47E-12"},{"v":1.82e-10,"d":"1.82E-10"},"Protein kinase superfamily protein.","AT1G14360","UTR3",223.51,1.3534,0.22566,5.9973,{"v":2.01e-09,"d":"2.01E-09"},{"v":3.84E-8,"d":"3.84E-08"},"full_name=UDP-galactose transporter 3. UDP-galactose transporter 3.","AT4G14420",null,397.42,-1.0121,0.18823,-5.3767,{"v":7.59e-08,"d":"7.59E-08"},{"v":1.43e-06,"d":"1.43E-06"},"HR-like lesion-inducing protein-like protein."]
["AT5G02100","UNE18",388.15,-1.2666,0.18602,-6.8091,{"v":9.82e-12,"d":"9.82E-12"},{"v":1.89e-10,"d":"1.89E-10"},"full_name=UNFERTILIZED EMBRYO SAC 18. Oxysterol-binding family protein. Encodes a protein that binds to beta-sitosterol and localizes to the ER. The WFDE motif in ORP3a appears to be important for a direct interaction with PVA12 [Plant VAMP-Associated protein 12]. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent.","AT5G49630","AAP6",181.42,1.776,0.29618,5.9962,{"v":2.02e-09,"d":"2.02E-09"},{"v":3.87e-08,"d":"3.87E-08"},"full_name=amino acid permease 6. amino acid permease 6. Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem.","AT5G49710",null,191.09,1.3146,0.24453,5.3761,{"v":7.61E-8,"d":"7.61E-08"},{"v":1.43e-06,"d":"1.43E-06"},"RING finger protein."]
["AT1G33970","IAN9",966.2,0.93093,0.13675,6.8076,{"v":9.92e-12,"d":"9.92E-12"},{"v":1.91e-10,"d":"1.91E-10"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT5G49990",null,761.4,-0.8213,0.13709,-5.9909,{"v":2.09E-9,"d":"2.09E-09"},{"v":3.99E-8,"d":"3.99E-08"},"Xanthine/uracil permease family protein.","AT5G24460",null,330.57,1.3747,0.2558,5.3742,{"v":7.69e-08,"d":"7.69E-08"},{"v":1.44E-6,"d":"1.44E-06"},"RING-H2 zinc finger protein."]
["AT2G40340","DREB2C",170.58,1.8733,0.27533,6.804,{"v":1.02e-11,"d":"1.02E-11"},1.95E-10,"Integrase-type DNA-binding superfamily protein. Encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.","AT2G40400","BPG3",162.12,1.5986,0.26749,5.9762,{"v":2.28E-9,"d":"2.28E-09"},{"v":4.36E-8,"d":"4.36E-08"},"DUF399 family protein, putative (DUF399 and DUF3411). Encodes a chloroplast localized protein of unknown function that is involved in regulation of chloroplast development.","AT1G51200",null,1653.7,0.69658,0.12965,5.3726,{"v":7.76e-08,"d":"7.76E-08"},{"v":1.45e-06,"d":"1.45E-06"},"A20/AN1-like zinc finger family protein."]
["AT5G20150","SPX1",815.82,-0.85632,0.12591,-6.8011,{"v":1.04e-11,"d":"1.04E-11"},{"v":1.99e-10,"d":"1.99E-10"},"full_name=SPX domain gene 1. SPX domain-containing protein 1. Expression is upregulated in the shoot of cax1/cax3 mutant. Additionally, its expression is responsive to both phosphate (Pi) and phosphite (Phi) in both roots and shoots.","AT4G23270","CRK19",41.935,3.2579,0.54532,5.9743,{"v":2.31e-09,"d":"2.31E-09"},{"v":4.41e-08,"d":"4.41E-08"},"full_name=cysteine-rich RLK (RECEPTOR-like protein kinase) 19. cysteine-rich RLK (RECEPTOR-like protein kinase) 19. Encodes a cysteine-rich receptor-like protein kinase.","AT2G06850","XTH4",425.81,-1.1246,0.20935,-5.3719,{"v":7.79e-08,"d":"7.79E-08"},{"v":1.46E-6,"d":"1.46E-06"},"full_name=xyloglucan endotransglucosylase/hydrolase 4. xyloglucan endotransglucosylase/hydrolase 4. endoxyloglucan transferase (EXGT-A1) gene"]
["AT2G27530","PGY1",8330.1,0.5025,0.073927,6.7973,{"v":1.07e-11,"d":"1.07E-11"},{"v":2.04e-10,"d":"2.04E-10"},"full_name=PIGGYBACK1. Ribosomal protein L1p/L10e family. Encodes ribosomal protein L10aP. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.","AT1G14130","DAO1",129.54,-1.7078,0.28606,-5.97,{"v":2.37e-09,"d":"2.37E-09"},{"v":4.52e-08,"d":"4.52E-08"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT5G20840","SAC4",494.16,1.0069,0.18745,5.3718,{"v":7.79e-08,"d":"7.79E-08"},{"v":1.46E-6,"d":"1.46E-06"},"Phosphoinositide phosphatase family protein."]
["AT4G30530","GGP1",933.44,0.87518,0.12878,6.7957,{"v":1.08e-11,"d":"1.08E-11"},{"v":2.06e-10,"d":"2.06E-10"},"full_name=gamma-glutamyl peptidase 1. Class I glutamine amidotransferase-like superfamily protein. Encodes a gamma-glutamyl peptidase, outside the GGT family, that can hydrolyze gamma-glutamyl peptide bonds.","AT5G45430",null,998.97,-0.75438,0.12638,-5.9693,{"v":2.38e-09,"d":"2.38E-09"},{"v":4.54e-08,"d":"4.54E-08"},"Protein kinase superfamily protein.","AT1G67856",null,29.635,4.8276,0.89885,5.3709,{"v":7.84e-08,"d":"7.84E-08"},{"v":1.46E-6,"d":"1.46E-06"},"RING/U-box superfamily protein."]
["AT4G13050","FATA2",177.99,-1.7536,0.2581,-6.7941,{"v":1.09e-11,"d":"1.09E-11"},{"v":2.08e-10,"d":"2.08E-10"},"Acyl-ACP thioesterase.","AT1G32870","NAC13",404.34,-1.163,0.19499,-5.9642,{"v":2.46e-09,"d":"2.46E-09"},{"v":4.68e-08,"d":"4.68E-08"},"full_name=NAC domain protein 13. NAC domain protein 13.","AT5G63130",null,38.088,3.3356,0.6211,5.3705,{"v":7.85e-08,"d":"7.85E-08"},{"v":1.46E-6,"d":"1.46E-06"},"Octicosapeptide/Phox/Bem1p family protein."]
["AT5G67080","MAPKKK19",64.183,4.0733,0.59961,6.7932,{"v":1.1e-11,"d":"1.10E-11"},2.09E-10,"full_name=mitogen-activated protein kinase kinase kinase 19. mitogen-activated protein kinase kinase kinase 19. member of MEKK subfamily","AT5G39610","NAC6",131.08,-1.7433,0.29238,-5.9625,{"v":2.48e-09,"d":"2.48E-09"},{"v":4.72e-08,"d":"4.72E-08"},"full_name=NAC domain containing protein 6. NAC domain containing protein 6. Encodes a NAC-domain transcription factor. Positively regulates aging-induced cell death and senescence in leaves. This gene is upregulated in response to salt stress in wildtype as well as NTHK1 transgenic lines although in the latter case the induction was drastically reduced. It was also upregulated by ABA, ACC and NAA treatment, although in the latter two cases, the induction occurred relatively late when compared with NaCl or ABA treatments. Note: this protein (AtNAC6) on occasion has also been referred to as AtNAC2, not to be confused with the AtNAC2 found at locus AT3G15510.","AT5G47810","PFK2",461.56,1.1884,0.22132,5.3696,{"v":7.89e-08,"d":"7.89E-08"},{"v":1.47e-06,"d":"1.47E-06"},"full_name=phosphofructokinase 2. phosphofructokinase 2."]
["AT5G41410","BEL1",81.304,-2.7677,0.40774,-6.7878,{"v":1.14e-11,"d":"1.14E-11"},2.17E-10,"full_name=BELL 1. POX (plant homeobox) family protein. Homeodomain protein required for ovule identity.Loss of function mutations show homeotic conversion of integuments to carpels.Forms heterodimers with STM and KNAT1. Interacts with AG-SEP heterodimers is thought to restrict WUS expression. BEL interacts with MADS box dimers composed of SEP1(or SEP3) and AG, SHP1, SHP2 and STK. The interaction of BEL1 with AG-SEP3 is required for proper integument development and specification of integument identity.","AT1G17500","ALA4",266.01,1.2548,0.21092,5.9493,{"v":2.69E-9,"d":"2.69E-09"},{"v":5.11e-08,"d":"5.11E-08"},"ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein.","AT1G49430","LACS2",227.54,-1.4122,0.26313,-5.367,{"v":8.01e-08,"d":"8.01E-08"},{"v":1.49e-06,"d":"1.49E-06"},"full_name=long-chain acyl-CoA synthetase 2. long-chain acyl-CoA synthetase 2. Encodes a long chain acyl-CoA synthetase that catalyzes the synthesis of omega-hydroxy fatty acyl-CoA intermediates in the pathway to cutin synthesis. Required for repression of lateral root formation."]
["AT1G61820","BGLU46",264.12,-1.4784,0.21785,-6.7866,{"v":1.15e-11,"d":"1.15E-11"},{"v":2.19e-10,"d":"2.19E-10"},"full_name=beta glucosidase 46. beta glucosidase 46.","AT5G55730","FLA1",176.25,1.4147,0.23781,5.9489,{"v":2.7e-09,"d":"2.70E-09"},{"v":5.12e-08,"d":"5.12E-08"},"full_name=FASCICLIN-like arabinogalactan 1. FASCICLIN-like arabinogalactan 1. Encodes fasciclin-like arabinogalactan-protein 1 (Fla1). fla1 mutants show defects in shoot regeneration.","AT5G37540",null,89.876,2.2367,0.41675,5.3669,{"v":8.01e-08,"d":"8.01E-08"},{"v":1.49e-06,"d":"1.49E-06"},"Eukaryotic aspartyl protease family protein."]
["AT2G33520","ATHCYSTM7",252.76,-1.6067,0.23684,-6.7839,{"v":1.17e-11,"d":"1.17E-11"},{"v":2.23e-10,"d":"2.23E-10"},"cysteine-rich/transmembrane domain protein A.","AT3G12120","FAD2",24182,-0.5954,0.10009,-5.9488,{"v":2.7e-09,"d":"2.70E-09"},{"v":5.12e-08,"d":"5.12E-08"},"full_name=fatty acid desaturase 2. fatty acid desaturase 2. Major enzyme responsible for the synthesis of 18:2 fatty acids in the endoplasmic reticulum. Contains His-rich motifs, which contribute to the interaction with the electron donor cytochrome b5. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.","AT3G25220","FKBP15-1",379.42,-1.0247,0.19102,-5.3641,{"v":8.13e-08,"d":"8.13E-08"},{"v":1.51e-06,"d":"1.51E-06"},"full_name=FK506-binding protein 15 kD-1. FK506-binding protein 15 kD-1. immunophilin (FKBP15-1)"]
["AT3G14450","CID9",406.91,-1.1604,0.17109,-6.7823,{"v":1.18e-11,"d":"1.18E-11"},2.25E-10,"full_name=CTC-interacting domain 9. CTC-interacting domain 9. RNA-binding protein, putative, contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies). Contains PAM PABC binding domain.","AT1G29240",null,218.28,1.3741,0.23106,5.9469,{"v":2.73e-09,"d":"2.73E-09"},{"v":5.18e-08,"d":"5.18E-08"},"transcription initiation factor TFIID subunit, putative (DUF688).","AT5G47610","ATL79",103.27,1.7759,0.33134,5.3598,{"v":8.33e-08,"d":"8.33E-08"},{"v":1.55E-6,"d":"1.55E-06"},"RING/U-box superfamily protein."]
["AT3G28150","TBL22",100.2,-2.9639,0.43705,-6.7815,{"v":1.19e-11,"d":"1.19E-11"},2.26E-10,"full_name=TRICHOME BIREFRINGENCE-LIKE 22. TRICHOME BIREFRINGENCE-LIKE 22. Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. A putative xyloglucan O-acetyltransferase. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT3G47650","BSD2",1009.9,0.7925,0.13342,5.9399,{"v":2.85e-09,"d":"2.85E-09"},{"v":5.39E-8,"d":"5.39E-08"},"DnaJ/Hsp40 cysteine-rich domain superfamily protein.","AT4G36250","ALDH3F1",926.47,-0.83495,0.15584,-5.3576,{"v":8.43e-08,"d":"8.43E-08"},{"v":1.56e-06,"d":"1.56E-06"},"full_name=aldehyde dehydrogenase 3F1. aldehyde dehydrogenase 3F1. Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures."]
["AT3G23790","AAE16",519.29,1.0078,0.14864,6.7801,{"v":1.2e-11,"d":"1.20E-11"},{"v":2.28e-10,"d":"2.28E-10"},"full_name=acyl activating enzyme 16. AMP-dependent synthetase and ligase family protein.","AT1G56330","SAR1B",740.84,0.80977,0.13655,5.9304,{"v":3.02e-09,"d":"3.02E-09"},{"v":5.71e-08,"d":"5.71E-08"},"full_name=secretion-associated RAS 1B. secretion-associated RAS 1B. Encodes a small GTP-binding protein implicated in ER to cis-Golgi transport of other proteins. A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. The protein is found associated to the ER and free in the cytosol.","AT1G01470","LEA14",1583.1,2.3438,0.4375,5.3572,{"v":8.45e-08,"d":"8.45E-08"},{"v":1.57E-6,"d":"1.57E-06"},"full_name=LATE EMBRYOGENESIS ABUNDANT 14. Late embryogenesis abundant protein. Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against dessication."]
["AT2G44470","BGLU29",137.87,-2.0587,0.30432,-6.7652,1.33E-11,{"v":2.52e-10,"d":"2.52E-10"},"full_name=beta glucosidase 29. beta glucosidase 29.","AT2G23010","SCPL9",482.11,1.0759,0.1819,5.915,{"v":3.32e-09,"d":"3.32E-09"},{"v":6.25e-08,"d":"6.25E-08"},"full_name=serine carboxypeptidase-like 9. serine carboxypeptidase-like 9.","AT3G25910","SIZ1",1867,0.78986,0.14761,5.3508,{"v":8.75e-08,"d":"8.75E-08"},{"v":1.61E-6,"d":"1.61E-06"},"MAP kinase kinase kinase, putative (DUF1644)."]
["AT4G34670",null,9644.5,0.4944,0.073185,6.7555,1.42E-11,{"v":2.68e-10,"d":"2.68E-10"},"Ribosomal protein S3Ae.","AT1G15570","CYCA2;3",91.57,1.9888,0.33672,5.9063,{"v":3.5e-09,"d":"3.50E-09"},{"v":6.55e-08,"d":"6.55E-08"},"full_name=CYCLIN A2;3. CYCLIN A2;3. A2-type cyclin. Negatively regulates endocycles and acts as a key regulator of ploidy levels in Arabidopsis endoreduplication. Interacts physically with CDKA;1. Expressed preferentially in trichomes and young developing tissues.","AT1G08230",null,167.13,1.844,0.34502,5.3447,{"v":9.06e-08,"d":"9.06E-08"},{"v":1.66E-6,"d":"1.66E-06"},"Transmembrane amino acid transporter family protein. Codes for a H+-driven, high affinity gamma-aminobutyric acid (GABA) transporter. Localized at the plasma membrane. In planta, AtGAT1 expression was highest in flowers and under conditions of elevated GABA concentrations such as wounding or senescence."]
["AT5G62530","ALDH12A1",2154.4,-0.63057,0.093471,-6.7461,1.52E-11,2.85E-10,"full_name=aldehyde dehydrogenase 12A1. aldehyde dehydrogenase 12A1. Encodes mitochondrial Delta-pyrroline-5- carboxylate dehydrogenase. Involved in the catabolism of proline to glutamate. Involved in protection from proline toxicity. Induced at pathogen infection sites. P5CDH and SRO5 (an overlapping gene in the sense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.","AT1G10360","GSTU18",58.797,2.4408,0.41364,5.9009,{"v":3.62e-09,"d":"3.62E-09"},{"v":6.75e-08,"d":"6.75E-08"},"full_name=glutathione S-transferase TAU 18. glutathione S-transferase TAU 18. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","AT1G09750",null,268.46,-1.1819,0.22142,-5.338,{"v":9.4e-08,"d":"9.40E-08"},{"v":1.72E-6,"d":"1.72E-06"},"Eukaryotic aspartyl protease family protein."]
["AT3G55760","LESV",314.21,1.265,0.18754,6.7452,{"v":1.53e-11,"d":"1.53E-11"},{"v":2.86e-10,"d":"2.86E-10"},"hypothetical protein.","AT5G17920","ATMS1",10938,0.61257,0.10389,5.8966,{"v":3.71e-09,"d":"3.71E-09"},{"v":6.92e-08,"d":"6.92E-08"},"full_name=methionine synthesis 1. Cobalamin-independent synthase family protein. Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.","AT5G66052",null,486.99,1.563,0.29295,5.3353,{"v":9.54e-08,"d":"9.54E-08"},{"v":1.74e-06,"d":"1.74E-06"},"transmembrane protein."]
["AT1G63660",null,780.98,1.4265,0.21205,6.7271,{"v":1.73e-11,"d":"1.73E-11"},{"v":3.22e-10,"d":"3.22E-10"},"GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase.","AT1G01500",null,240.04,-1.2573,0.2138,-5.8807,{"v":4.08E-9,"d":"4.08E-09"},{"v":7.57e-08,"d":"7.57E-08"},"Erythronate-4-phosphate dehydrogenase family protein.","AT1G32230","RCD1",1575.2,0.72969,0.13707,5.3236,{"v":1.02E-7,"d":"1.02E-07"},{"v":1.85e-06,"d":"1.85E-06"},"full_name=RADICAL-INDUCED CELL DEATH1. WWE protein-protein interaction domain protein family. Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm."]
["AT4G04760",null,163.44,-1.8535,0.27583,-6.7197,{"v":1.82e-11,"d":"1.82E-11"},{"v":3.38e-10,"d":"3.38E-10"},"Major facilitator superfamily protein.","AT3G51740","IMK2",80.719,2.0518,0.34913,5.8768,{"v":4.18E-9,"d":"4.18E-09"},{"v":7.73e-08,"d":"7.73E-08"},"full_name=inflorescence meristem receptor-like kinase 2. inflorescence meristem receptor-like kinase 2. encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors.","AT2G20610","SUR1",272.26,-1.2362,0.23243,-5.3187,{"v":1.05E-7,"d":"1.05E-07"},{"v":1.89e-06,"d":"1.89E-06"},"full_name=SUPERROOT 1. Tyrosine transaminase family protein. Confers auxin overproduction. Mutants have an over-proliferation of lateral roots. Encodes a C-S lyase involved in converting S-alkylthiohydroximate to thiohydroximate in glucosinolate biosynthesis."]
["AT5G13790","AGL15",319.89,-1.3075,0.19461,-6.7185,{"v":1.84e-11,"d":"1.84E-11"},{"v":3.4e-10,"d":"3.40E-10"},"full_name=AGAMOUS-like 15. AGAMOUS-like 15. AGL15 (AGAMOUS-Like 15) is a member of the MADS domain family of regulatory factors. Although AGL15 is preferentially expressed during embryogenesis, AGL15 is also expressed in leaf primordia, shoot apical meristems and young floral buds, suggesting that AGL15 may play a role during post-germinative development. Transgenic plants that ectopically express AGL15 show delays in the transition to flowering, perianth abscission and senescence and fruit and seed maturation. Role in embryogenesis and gibberellic acid catabolism. Targets B3 domain transcription factors that are key regulators of embryogenesis.","AT2G45210","SAUR36",49.78,-3.5274,0.60033,-5.8757,{"v":4.21e-09,"d":"4.21E-09"},{"v":7.77e-08,"d":"7.77E-08"},"full_name=SMALL AUXIN UPREGULATED 36. SAUR-like auxin-responsive protein family.","AT1G16860","SHOU4L",516.52,0.92762,0.17446,5.3172,{"v":1.05E-7,"d":"1.05E-07"},{"v":1.91e-06,"d":"1.91E-06"},"Ubiquitin-specific protease family C19-related protein."]
["AT1G14290","SBH2",143.77,-2.1429,0.31927,-6.7118,{"v":1.92e-11,"d":"1.92E-11"},{"v":3.55e-10,"d":"3.55E-10"},"full_name=sphingoid base hydroxylase 2. sphingoid base hydroxylase 2. Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth.","AT4G17940",null,1128.4,-0.84552,0.14409,-5.8678,{"v":4.42E-9,"d":"4.42E-09"},{"v":8.12e-08,"d":"8.12E-08"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT3G60030","SPL12",797.64,0.90098,0.16964,5.3113,{"v":1.09E-7,"d":"1.09E-07"},{"v":1.96e-06,"d":"1.96E-06"},"full_name=squamosa promoter-binding protein-like 12. squamosa promoter-binding protein-like 12."]
["AT1G32920",null,460.91,1.3605,0.20288,6.706,{"v":2e-11,"d":"2.00E-11"},{"v":3.68e-10,"d":"3.68E-10"},"hypothetical protein.","AT4G33260","CDC20.2",62.592,2.3653,0.40374,5.8584,{"v":4.67e-09,"d":"4.67E-09"},{"v":8.56e-08,"d":"8.56E-08"},"full_name=cell division cycle 20.2. Transducin family protein / WD-40 repeat family protein. Encodes a CDC20 protein that interacts with APC subunits, components of the mitochondrial checkpoint complex and mitotic cyclin substrates and is indispensable for normal plant development and fertility.","AT4G10020","HSD5",354.63,1.1492,0.21647,5.3088,{"v":1.1e-07,"d":"1.10E-07"},{"v":1.98e-06,"d":"1.98E-06"},"full_name=hydroxysteroid dehydrogenase 5. hydroxysteroid dehydrogenase 5. Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5."]
["AT1G20020","FNR2",290.59,1.3169,0.19685,6.6902,2.23E-11,{"v":4.08e-10,"d":"4.08E-10"},"full_name=ferredoxin-NADP(+)-oxidoreductase 2. ferredoxin-NADP[+]-oxidoreductase 2. Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the stroma","AT5G54390","HL",969.23,-0.82983,0.14191,-5.8478,{"v":4.98e-09,"d":"4.98E-09"},{"v":9.08e-08,"d":"9.08E-08"},"full_name=HAL2-like. HAL2-like protein. Encodes a 3'-phosphoadenosine-5'-phosphate (PAP) phosphatase that is sensitive to physiological concentrations of Na+. It does not also act as inositol polyphosphate 1-phosphatases, which other members of the HAL2-like family do. It is proposed that AHL acts in concert with sulphotransferases to prevent both the toxicity of PAP on RNA processing enzymes as well as the product inhibition of PAP on sulphate conjugation.","AT3G01490","CBC1",215.02,1.6549,0.31209,5.3028,{"v":1.14E-7,"d":"1.14E-07"},{"v":2.04E-6,"d":"2.04E-06"},"Protein kinase superfamily protein."]
["AT2G27040","AGO4",1710.7,-0.7047,0.10552,-6.6785,{"v":2.41e-11,"d":"2.41E-11"},{"v":4.4e-10,"d":"4.40E-10"},"full_name=ARGONAUTE 4. Argonaute family protein. AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens.","AT2G24280",null,625.96,0.86778,0.14883,5.8307,{"v":5.52E-9,"d":"5.52E-09"},{"v":1e-07,"d":"1.00E-07"},"alpha/beta-Hydrolases superfamily protein.","AT5G64270",null,1118,0.73467,0.13877,5.294,{"v":1.2e-07,"d":"1.20E-07"},{"v":2.13e-06,"d":"2.13E-06"},"splicing factor."]
["AT3G08520",null,1711.2,0.70545,0.10565,6.6774,{"v":2.43e-11,"d":"2.43E-11"},{"v":4.43e-10,"d":"4.43E-10"},"Ribosomal protein L41 family.","AT1G53470","MSL4",247.75,1.4043,0.24116,5.8231,{"v":5.78e-09,"d":"5.78E-09"},{"v":1.05E-7,"d":"1.05E-07"},"full_name=mechanosensitive channel of small conductance-like 4. mechanosensitive channel of small conductance-like 4.","AT5G51820","PGM",1924.8,0.70912,0.1341,5.2881,{"v":1.24E-7,"d":"1.24E-07"},{"v":2.2e-06,"d":"2.20E-06"},"full_name=phosphoglucomutase. phosphoglucomutase. Encodes a plastid isoform of the enzyme phosphoglucomutase involved in controlling photosynthetic carbon flow. Effective petiole movement against the direction of the gravity requires functional PGM activity that is required for full development of amyloplasts."]
["AT1G48570",null,831.85,1.1018,0.16577,6.6465,{"v":3E-11,"d":"3.00E-11"},{"v":5.44e-10,"d":"5.44E-10"},"zinc finger (Ran-binding) family protein.","AT2G20630","PIA1",227.31,1.2695,0.21832,5.815,{"v":6.06e-09,"d":"6.06E-09"},{"v":1.09E-7,"d":"1.09E-07"},"full_name=PP2C induced by AVRRPM1. PP2C induced by AVRRPM1.","AT4G27870",null,1331.9,0.7132,0.13502,5.2823,{"v":1.28e-07,"d":"1.28E-07"},{"v":2.26E-6,"d":"2.26E-06"},"Vacuolar iron transporter (VIT) family protein."]
["AT4G22850",null,206.76,-1.5055,0.22701,-6.6319,{"v":3.31e-11,"d":"3.31E-11"},5.98E-10,"SNARE associated Golgi protein family.","AT1G68520","BBX14",32.669,8.9111,1.536,5.8014,{"v":6.57e-09,"d":"6.57E-09"},{"v":1.18E-7,"d":"1.18E-07"},"full_name=B-box domain protein 14. B-box type zinc finger protein with CCT domain-containing protein.","AT1G28400",null,91.713,-1.9024,0.36048,-5.2775,{"v":1.31E-7,"d":"1.31E-07"},{"v":2.31e-06,"d":"2.31E-06"},"GATA zinc finger protein."]
["AT5G40670",null,457.51,1.3396,0.20204,6.6304,{"v":3.35e-11,"d":"3.35E-11"},{"v":6.04e-10,"d":"6.04E-10"},"PQ-loop repeat family protein / transmembrane family protein.","AT5G49800",null,39.117,3.5896,0.61887,5.8002,{"v":6.62e-09,"d":"6.62E-09"},{"v":1.19e-07,"d":"1.19E-07"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein.","AT2G16660",null,161.36,-1.4683,0.27833,-5.2753,{"v":1.33e-07,"d":"1.33E-07"},{"v":2.33e-06,"d":"2.33E-06"},"Major facilitator superfamily protein."]
["AT4G17520","HLN",3651,0.55509,0.083809,6.6233,3.51E-11,{"v":6.31e-10,"d":"6.31E-10"},"Hyaluronan / mRNA binding family.","AT1G78050","PGM",115.58,-1.9468,0.336,-5.7942,{"v":6.87e-09,"d":"6.87E-09"},{"v":1.23E-7,"d":"1.23E-07"},"full_name=phosphoglycerate/bisphosphoglycerate mutase. phosphoglycerate/bisphosphoglycerate mutase.","AT2G21330","FBA1",1916.7,0.84162,0.15968,5.2706,{"v":1.36E-7,"d":"1.36E-07"},{"v":2.38e-06,"d":"2.38E-06"},"full_name=fructose-bisphosphate aldolase 1. fructose-bisphosphate aldolase 1."]
["AT5G17980","MCTP16",112.48,-2.5435,0.38472,-6.6112,{"v":3.81e-11,"d":"3.81E-11"},{"v":6.82e-10,"d":"6.82E-10"},"C2 calcium/lipid-binding plant phosphoribosyltransferase family protein.","AT4G25900",null,32.341,5.3703,0.93038,5.7721,{"v":7.83e-09,"d":"7.83E-09"},{"v":1.4e-07,"d":"1.40E-07"},"Galactose mutarotase-like superfamily protein.","AT1G12360","KEU",638.32,0.8519,0.16174,5.267,{"v":1.39e-07,"d":"1.39E-07"},{"v":2.42e-06,"d":"2.42E-06"},"full_name=keule. Sec1/munc18-like (SM) proteins superfamily. encodes a Sec1 protein and expressed throughout the plant. physically interacts with Syntaxin1 and is required for cytokinesis."]
["AT2G45290","TKL2",2411.2,-0.72774,0.11022,-6.6027,{"v":4.04e-11,"d":"4.04E-11"},{"v":7.21e-10,"d":"7.21E-10"},"Transketolase.","AT4G15396","CYP702A6",41.211,-4.2693,0.74106,-5.761,{"v":8.36e-09,"d":"8.36E-09"},{"v":1.49E-7,"d":"1.49E-07"},"full_name=cytochrome P450, family 702, subfamily A, polypeptide 6. cytochrome P450, family 702, subfamily A, polypeptide 6. a member of the cytochrome P450 family. molecular function unknown.","AT1G22370","UGT85A5",312.24,1.2143,0.23087,5.2595,{"v":1.44e-07,"d":"1.44E-07"},{"v":2.52E-6,"d":"2.52E-06"},"full_name=UDP-glucosyl transferase 85A5. UDP-glucosyl transferase 85A5."]
["AT3G19500",null,203.75,-1.7442,0.26444,-6.5958,{"v":4.23e-11,"d":"4.23E-11"},{"v":7.53e-10,"d":"7.53E-10"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT4G34120","LEJ1",326.55,1.5189,0.26387,5.7561,{"v":8.61e-09,"d":"8.61E-09"},{"v":1.53e-07,"d":"1.53E-07"},"full_name=LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 1. Cystathionine beta-synthase (CBS) family protein. Encodes a single cystathionine beta-Synthase domain-containing protein. Modulates development by regulating the thioredoxin system.","AT1G07150","MAPKKK13",86.744,1.8805,0.35791,5.2541,{"v":1.49E-7,"d":"1.49E-07"},{"v":2.59e-06,"d":"2.59E-06"},"full_name=mitogen-activated protein kinase kinase kinase 13. mitogen-activated protein kinase kinase kinase 13. member of MEKK subfamily"]
["AT3G23430","PHO1",294.99,-1.4907,0.2264,-6.5842,{"v":4.57e-11,"d":"4.57E-11"},{"v":8.1e-10,"d":"8.10E-10"},"full_name=phosphate 1. phosphate 1. Encodes a protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains. The mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. Its expression is repressed by phosphate (Pi) in shoots, and transiently induced by phosphite (Phi) in roots and shoots.","AT1G07050","FITNESS",30.887,8.8265,1.5383,5.7378,{"v":9.59e-09,"d":"9.59E-09"},{"v":1.69e-07,"d":"1.69E-07"},"CCT motif family protein.","AT1G54690","GAMMA-H2AX",164,-1.4223,0.27096,-5.2493,{"v":1.53e-07,"d":"1.53E-07"},{"v":2.64e-06,"d":"2.64E-06"},"full_name=gamma histone variant H2AX. gamma histone variant H2AX. Encodes HTA3, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (&#947;-H2AX) occurs around the break site. %01H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse &#947;-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no &#947;-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of &#947;-H2AX to a maximum of >50 diffuse foci. The level of &#947;H2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10%E2%80%9320 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin."]
["AT1G20340","DRT112",1953.5,-0.68304,0.10398,-6.5692,{"v":5.06e-11,"d":"5.06E-11"},{"v":8.94e-10,"d":"8.94E-10"},"full_name=DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112. Cupredoxin superfamily protein. recombination and DNA-damage resistance protein (DRT112) One of two Arabidopsis plastocyanin genes. Predominant form, expressed 10x higher than PETE1. PETE2 is thought to be post-transcriptionally regulated via copper accumulation and is involved in copper homeostasis. Mutation of this gene does not have obvious effect on photosynthesis. In plsp1-1 mutant plastids, the nonmature form of the protein localizes in the membrane.","AT1G02930","GSTF6",1313.6,1.0721,0.18698,5.7337,{"v":9.83e-09,"d":"9.83E-09"},{"v":1.73E-7,"d":"1.73E-07"},"full_name=glutathione S-transferase 6. glutathione S-transferase 6. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).","AT5G04080","ATHCYSTM12",164.19,1.4111,0.26911,5.2436,{"v":1.58e-07,"d":"1.58E-07"},{"v":2.72e-06,"d":"2.72E-06"},"cysteine-rich TM module stress tolerance protein."]
["AT5G55730","FLA1",268.57,-1.714,0.26125,-6.5609,{"v":5.35e-11,"d":"5.35E-11"},{"v":9.43e-10,"d":"9.43E-10"},"full_name=FASCICLIN-like arabinogalactan 1. FASCICLIN-like arabinogalactan 1. Encodes fasciclin-like arabinogalactan-protein 1 (Fla1). fla1 mutants show defects in shoot regeneration.","AT4G17240",null,60.937,2.317,0.40435,5.7303,{"v":1E-8,"d":"1.00E-08"},{"v":1.76e-07,"d":"1.76E-07"},"structural maintenance of chromosomes protein.","AT4G16160","ATOEP16-2",523.11,1.352,0.25793,5.2419,{"v":1.59e-07,"d":"1.59E-07"},{"v":2.73e-06,"d":"2.73E-06"},"Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein. Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family. Two OEP16 genes are closely related to each other and are conserved in all land plants, OEP16-2, also named OEP16-S, and OEP16-1 (renamed OEP16-L) are result of the gene duplication event that occurred prior to divergence of bryophytes and seed plants. Predominantly expressed in seed and is not inducible by cold treatment. atOEP16-S gained an additional exon. The promoter region of atOEP16-S (but not atOEP16-L) contains multiple G-box ABA-responsive elements. The atOEP16-S promoter conferred developmentally regulated seed- and pollen-specific GUS expression in tobacco."]
["AT5G63700",null,358.96,-1.1577,0.17687,-6.5454,{"v":5.93e-11,"d":"5.93E-11"},{"v":1.04e-09,"d":"1.04E-09"},"zinc ion binding / DNA binding protein.","AT3G43800","GSTU27",212.97,1.3648,0.23834,5.7262,{"v":1.03E-8,"d":"1.03E-08"},{"v":1.8E-7,"d":"1.80E-07"},"full_name=glutathione S-transferase tau 27. glutathione S-transferase tau 27. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","AT3G28860","ABCB19",858.47,-0.79503,0.15171,-5.2403,{"v":1.6E-7,"d":"1.60E-07"},{"v":2.75e-06,"d":"2.75E-06"},"full_name=ATP-binding cassette B19. ATP binding cassette subfamily B19. Encodes a member of the ATP-binding cassette (ABC) transporter family that is involved in auxin transport and is involved in postembryonic organ separation. Also known as AtMDR11 and PGP19. Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Acts upstream of phyA in regulating hypocotyl elongation and gravitropic response. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AtPGP1."]
["AT3G05630","PLDP2",332.05,-1.4339,0.21937,-6.5363,{"v":6.31e-11,"d":"6.31E-11"},{"v":1.1e-09,"d":"1.10E-09"},"full_name=phospholipase D P2. phospholipase D P2. Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. Regulates vesicle trafficking. Required for auxin transport and distribution and hence auxin responses. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Plays a major role in phosphatidic acid production during phosphate deprivation. Induced upon Pi starvation in both shoots and roots. Involved in hydrolyzing phosphatidylcholine and phosphatidylethanolamine to produce diacylglycerol for digalactosyldiacylglycerol synthesis and free Pi to sustain other Pi-requiring processes. Does not appear to be involved in root hair patterning. Expression is upregulated in the shoot of cax1/cax3 mutant and is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots.","AT3G25260","NPF4.1",47.708,-8.5916,1.5027,-5.7175,{"v":1.08e-08,"d":"1.08E-08"},{"v":1.88e-07,"d":"1.88E-07"},"Major facilitator superfamily protein.","AT2G22890",null,89.559,-1.8189,0.34761,-5.2327,{"v":1.67E-7,"d":"1.67E-07"},{"v":2.85e-06,"d":"2.85E-06"},"Kua-ubiquitin conjugating enzyme hybrid localization domain-containing protein."]
["AT4G38100","CURT1D",530.21,1.0003,0.15321,6.529,{"v":6.62e-11,"d":"6.62E-11"},{"v":1.15E-9,"d":"1.15E-09"},"CURVATURE THYLAKOID 1D-like protein.","AT4G27720",null,417.56,1.0192,0.17867,5.7042,{"v":1.17e-08,"d":"1.17E-08"},{"v":2.03E-7,"d":"2.03E-07"},"Major facilitator superfamily protein.","AT1G64740","TUA1",155.15,1.4856,0.28425,5.2263,{"v":1.73E-7,"d":"1.73E-07"},{"v":2.94e-06,"d":"2.94E-06"},"full_name=alpha-1 tubulin. alpha-1 tubulin. alpha-tubulin expressed primarily in stamens and mature pollen"]
["AT1G68380",null,254.09,-1.3708,0.21008,-6.525,{"v":6.8e-11,"d":"6.80E-11"},{"v":1.18e-09,"d":"1.18E-09"},"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein.","AT1G66150","TMK1",375.88,1.0098,0.17716,5.6999,{"v":1.2E-8,"d":"1.20E-08"},{"v":2.08e-07,"d":"2.08E-07"},"full_name=transmembrane kinase 1. transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1)","AT1G09390",null,108.48,-1.7108,0.32757,-5.2225,{"v":1.77e-07,"d":"1.77E-07"},{"v":3e-06,"d":"3.00E-06"},"GDSL-like Lipase/Acylhydrolase superfamily protein."]
["AT2G03350",null,372.55,-1.2847,0.19695,-6.5233,{"v":6.88e-11,"d":"6.88E-11"},{"v":1.19E-9,"d":"1.19E-09"},"DUF538 family protein (Protein of unknown function, DUF538).","AT5G19250",null,46.295,3.611,0.63371,5.6982,{"v":1.21e-08,"d":"1.21E-08"},{"v":2.09e-07,"d":"2.09E-07"},"Glycoprotein membrane precursor GPI-anchored.","AT2G36460","FBA6",2431.1,0.71525,0.13702,5.2201,{"v":1.79E-7,"d":"1.79E-07"},{"v":3.03e-06,"d":"3.03E-06"},"full_name=fructose-bisphosphate aldolase 6. Aldolase superfamily protein."]
["AT1G48800",null,42.214,-4.8223,0.74074,-6.5101,{"v":7.51e-11,"d":"7.51E-11"},{"v":1.3e-09,"d":"1.30E-09"},"Terpenoid cyclases/Protein prenyltransferases superfamily protein.","AT3G46640","PCL1",524.6,0.86943,0.15315,5.6769,{"v":1.37E-8,"d":"1.37E-08"},{"v":2.36E-7,"d":"2.36E-07"},"full_name=PHYTOCLOCK 1. Homeodomain-like superfamily protein. Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter.","AT1G53645",null,282.16,-1.1334,0.2177,-5.2064,{"v":1.93e-07,"d":"1.93E-07"},{"v":3.24e-06,"d":"3.24E-06"},"hydroxyproline-rich glycoprotein family protein."]
["AT4G22756","SMO1-2",426.22,-1.0513,0.16173,-6.5003,{"v":8.02e-11,"d":"8.02E-11"},{"v":1.38E-9,"d":"1.38E-09"},"full_name=sterol C4-methyl oxidase 1-2. sterol C4-methyl oxidase 1-2. Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. More specifically functions as a 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha- methyl oxidase.","AT5G54200","WDD1",200.31,1.2511,0.22053,5.6729,{"v":1.4E-8,"d":"1.40E-08"},{"v":2.41E-7,"d":"2.41E-07"},"Transducin/WD40 repeat-like superfamily protein.","AT5G16600","MYB43",83.323,1.9689,0.37869,5.1992,{"v":2e-07,"d":"2.00E-07"},{"v":3.36E-6,"d":"3.36E-06"},"full_name=myb domain protein 43. myb domain protein 43. Encodes a putative transcription factor (MYB43)."]
["AT5G63260",null,490.2,-1.0653,0.16393,-6.4984,{"v":8.12e-11,"d":"8.12E-11"},{"v":1.39E-9,"d":"1.39E-09"},"Zinc finger C-x8-C-x5-C-x3-H type family protein.","AT3G11130","CHC1",1965.4,0.6534,0.11542,5.6611,{"v":1.5e-08,"d":"1.50E-08"},{"v":2.57e-07,"d":"2.57E-07"},"Clathrin, heavy chain.","AT1G60790","TBL2",206.83,1.3233,0.25471,5.1954,{"v":2.04E-7,"d":"2.04E-07"},{"v":3.43e-06,"d":"3.43E-06"},"full_name=TRICHOME BIREFRINGENCE-LIKE 2. trichome birefringence-like protein (DUF828). Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication)."]
["AT1G20480",null,106.16,-2.1486,0.3308,-6.495,{"v":8.3e-11,"d":"8.30E-11"},{"v":1.42e-09,"d":"1.42E-09"},"AMP-dependent synthetase and ligase family protein.","AT4G32060","MICU",769.5,0.79173,0.13994,5.6577,{"v":1.53e-08,"d":"1.53E-08"},{"v":2.62e-07,"d":"2.62E-07"},"calcium-binding EF hand family protein.","AT3G06730","TRX z",186.38,-1.3342,0.25689,-5.1938,{"v":2.06e-07,"d":"2.06E-07"},{"v":3.45E-6,"d":"3.45E-06"},"full_name=Thioredoxin z. Thioredoxin z. Encodes a plastidial thioredoxin (TRX) isoform that defines a branch of plastidial TRXs lying between x- and y-type TRXs and thus was named TRX z. Possesses disulfide reductase activity in vitro. TRX z was previously named as Trx p (thioredoxin putative and plastidic) before its thioredoxin activity was confirmed (Meng et al., PNAS 2010, 107:3900). Knockout mutant of TRX z has a severe albino phenotype and is inhibited in chloroplast development. Two fructokinase-like proteins (FLN1 and FLN2), members of the pfkB-carbohydrate kinase family, are potential TRX z targets."]
["AT5G01500","TAAC",637.19,-0.89723,0.13837,-6.4844,{"v":8.91e-11,"d":"8.91E-11"},{"v":1.52e-09,"d":"1.52E-09"},"full_name=thylakoid ATP/ADP carrier. thylakoid ATP/ADP carrier. encodes an ATP/ADP carrier that is located to the thylakoid membrane involved in providing ATP during thylakoid biogenesis and turnover","AT5G61820",null,225.84,-1.6033,0.28393,-5.6467,{"v":1.64e-08,"d":"1.64E-08"},{"v":2.78e-07,"d":"2.78E-07"},"stress up-regulated Nod 19 protein.","AT2G21590","APL4",447.29,1.1598,0.22374,5.1838,{"v":2.17E-7,"d":"2.17E-07"},{"v":3.62e-06,"d":"3.62E-06"},"Glucose-1-phosphate adenylyltransferase family protein. Encodes the large subunit of ADP-glucose pyrophosphorylase, the enzyme which catalyzes the first and limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms of the large subunit (ApL1-4) have been described."]
["AT5G50360","AITR5",2527,-2.1544,0.33252,-6.4791,{"v":9.23e-11,"d":"9.23E-11"},{"v":1.57E-9,"d":"1.57E-09"},"von willebrand factor A domain protein.","AT5G53160","RCAR3",153.71,1.7387,0.30837,5.6383,{"v":1.72e-08,"d":"1.72E-08"},{"v":2.91E-7,"d":"2.91E-07"},"full_name=regulatory components of ABA receptor 3. regulatory components of ABA receptor 3. Encodes RCAR3, a regulatory component of ABA receptor. Interacts with protein phosphatase 2Cs ABI1 and ABI2. Stimulates ABA signaling.","AT1G64670","BDG1",192.35,-1.3197,0.25489,-5.1774,{"v":2.25e-07,"d":"2.25E-07"},{"v":3.74e-06,"d":"3.74E-06"},"full_name=BODYGUARD1. alpha/beta-Hydrolases superfamily protein. Encodes a epidermally expressed extracellular protein that likely functions as an alpha-beta hydrolase and is required for normal cuticle formation. Homozygous mutant plants are dwarfed and have abnormal leaves, collapsed cells, reduced numbers of trichomes. The specific role of BDG is unclear: it may function in cutin biosynthesis or as a cross-linking enzyme in the cell wall itself."]
["AT1G73920",null,368.47,-1.2613,0.19485,-6.4734,{"v":9.58e-11,"d":"9.58E-11"},{"v":1.62E-9,"d":"1.62E-09"},"alpha/beta-Hydrolases superfamily protein.","AT1G79230","MST1",1257.6,-0.66263,0.11762,-5.6337,{"v":1.76e-08,"d":"1.76E-08"},{"v":2.97e-07,"d":"2.97E-07"},"full_name=mercaptopyruvate sulfurtransferase 1. mercaptopyruvate sulfurtransferase 1. encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification.","AT3G06210",null,199.56,1.2785,0.24738,5.168,{"v":2.37e-07,"d":"2.37E-07"},{"v":3.91e-06,"d":"3.91E-06"},"ARM repeat superfamily protein."]
["AT3G25920","RPL15",3537.7,0.57421,0.088811,6.4656,1.01E-10,{"v":1.7e-09,"d":"1.70E-09"},"full_name=ribosomal protein L15. ribosomal protein L15. encodes a plastid ribosomal protein CL15, a constituent of the large subunit of the ribosomal complex","AT5G18860","NSH3",86.455,1.8646,0.33116,5.6304,{"v":1.8e-08,"d":"1.80E-08"},{"v":3.02e-07,"d":"3.02E-07"},"full_name=nucleoside hydrolase 3. inosine-uridine preferring nucleoside hydrolase family protein. Encodes a purine nucleoside hydrolase active in the apoplast. It might play a role in salvaging extracellular ATP. NSH3 transcript levels rise in response to jasmonic acid and wounding.","AT5G13570","DCP2",282.14,1.1839,0.22943,5.1602,{"v":2.47e-07,"d":"2.47E-07"},{"v":4.07E-6,"d":"4.07E-06"},"full_name=decapping 2. decapping 2. Encodes DCP2 with mRNA decapping activity. DCP2 forms a mRNA decapping complex with DCP1 (At1g08370) and VCS (VARICOSE) (At3g13300). Recombinant DCP2 is enzymatically active in vitro, generating from capped mRNAs m7GDP, and 5%E2%80%99-phosphorylated mRNAs. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP1."]
["AT2G47780","LDAP2",2008.6,0.68587,0.1061,6.4642,1.02E-10,{"v":1.72e-09,"d":"1.72E-09"},"Rubber elongation factor protein (REF).","AT3G15980",null,637.02,0.87842,0.15608,5.6281,{"v":1.82e-08,"d":"1.82E-08"},{"v":3.06e-07,"d":"3.06E-07"},"Coatomer, beta' subunit.","AT1G18720",null,439.54,-0.92929,0.18016,-5.1581,{"v":2.5e-07,"d":"2.50E-07"},{"v":4.11e-06,"d":"4.11E-06"},"ER membrane protein, putative (DUF962)."]
["AT2G31060","EMB2785",1356.3,0.81267,0.12581,6.4592,1.05E-10,{"v":1.77e-09,"d":"1.77E-09"},"full_name=EMBRYO DEFECTIVE 2785. elongation factor family protein.","AT4G28750","PSAE-1",1456.8,1.1173,0.1989,5.6175,{"v":1.94e-08,"d":"1.94E-08"},{"v":3.25e-07,"d":"3.25E-07"},"full_name=PSA E1 KNOCKOUT. Photosystem I reaction centre subunit IV / PsaE protein. mutant has Decreased effective quantum yield of photosystem II; Pale green plants; Reduced growth rate; Subunit E of Photosystem I","AT1G15690","AVP1",9966.7,-0.71057,0.13802,-5.1482,{"v":2.63e-07,"d":"2.63E-07"},{"v":4.32e-06,"d":"4.32E-06"},"Inorganic H pyrophosphatase family protein. Encodes a H(+)-translocating (pyrophosphate-energized) inorganic pyrophosphatase (H(+)-PPase; EC 3.6.1.1) located in the vacuolar membrane. Expression is found in all tissues examined, including meristems and floral organ primordium. Expression is particularly enhanced in pollen, and is repressed by light. Over expression and loss of function phenotypes suggest AVP1 is involved in regulation of apoplastic pH and auxin transport. The effect on auxin transport likely involves effects of extracellular pH on subcellular localization of auxin efflux carriers such as PIN1."]
["AT2G04100",null,203.66,1.4472,0.22449,6.4467,{"v":1.14e-10,"d":"1.14E-10"},{"v":1.91e-09,"d":"1.91E-09"},"MATE efflux family protein.","AT5G06330",null,43.538,-3.3082,0.59041,-5.6032,{"v":2.1e-08,"d":"2.10E-08"},{"v":3.5e-07,"d":"3.50E-07"},"Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family.","AT2G43160",null,1270.4,0.78781,0.15331,5.1387,{"v":2.77e-07,"d":"2.77E-07"},{"v":4.52e-06,"d":"4.52E-06"},"ENTH/VHS family protein."]
["AT2G38960","ERO2",427.37,-1.0255,0.15913,-6.4446,1.16E-10,{"v":1.94e-09,"d":"1.94E-09"},"full_name=endoplasmic reticulum oxidoreductins 2. endoplasmic reticulum oxidoreductins 2. endoplasmic reticulum oxidoreductin","AT1G27770","ACA1",348.52,1.0533,0.18802,5.6021,{"v":2.12e-08,"d":"2.12E-08"},{"v":3.52e-07,"d":"3.52E-07"},"full_name=autoinhibited Ca2+-ATPase 1. autoinhibited Ca2+-ATPase 1. Encodes a chloroplast envelope Ca2+-ATPase with an N-terminal autoinhibitor.","AT1G09010",null,882.69,0.78588,0.153,5.1365,{"v":2.8e-07,"d":"2.80E-07"},{"v":4.57e-06,"d":"4.57E-06"},"glycoside hydrolase family 2 protein."]
["AT5G50770","HSD6",618.44,-0.90722,0.14106,-6.4316,1.26E-10,{"v":2.1e-09,"d":"2.10E-09"},"full_name=hydroxysteroid dehydrogenase 6. hydroxysteroid dehydrogenase 6. Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.","AT2G21850",null,39.219,2.9185,0.52178,5.5933,{"v":2.23e-08,"d":"2.23E-08"},{"v":3.69e-07,"d":"3.69E-07"},"Cysteine/Histidine-rich C1 domain family protein.","AT3G58640",null,739.98,0.89632,0.17464,5.1322,{"v":2.86e-07,"d":"2.86E-07"},{"v":4.65e-06,"d":"4.65E-06"},"Mitogen activated protein kinase kinase kinase-like protein."]
["AT3G27360","H3.1",156.44,2.1549,0.33527,6.4275,{"v":1.3e-10,"d":"1.30E-10"},{"v":2.15e-09,"d":"2.15E-09"},"Histone superfamily protein.","AT4G21850","MSRB9",62.3,2.2417,0.4012,5.5875,{"v":2.3e-08,"d":"2.30E-08"},{"v":3.81e-07,"d":"3.81E-07"},"full_name=methionine sulfoxide reductase B9. methionine sulfoxide reductase B9.","AT5G58160","FH13",437.71,0.96798,0.18892,5.1238,{"v":3e-07,"d":"3.00E-07"},{"v":4.85e-06,"d":"4.85E-06"},"actin binding protein."]
["AT4G27420","ABCG9",68.964,-2.6895,0.41881,-6.4219,1.35E-10,{"v":2.22e-09,"d":"2.22E-09"},"full_name=ATP-binding cassette G9. ABC-2 type transporter family protein.","AT1G60970",null,102.47,-2.01,0.35994,-5.5843,{"v":2.35e-08,"d":"2.35E-08"},{"v":3.86e-07,"d":"3.86E-07"},"SNARE-like superfamily protein.","AT1G76700",null,219.63,1.2501,0.24439,5.1149,{"v":3.14e-07,"d":"3.14E-07"},{"v":5.06e-06,"d":"5.06E-06"},"DNAJ heat shock N-terminal domain-containing protein."]
["AT1G73040",null,67.334,2.8371,0.44204,6.4183,{"v":1.38e-10,"d":"1.38E-10"},{"v":2.27e-09,"d":"2.27E-09"},"Mannose-binding lectin superfamily protein.","AT1G44000","SGRL",145.44,1.4853,0.26629,5.5777,{"v":2.44E-8,"d":"2.44E-08"},{"v":4e-07,"d":"4.00E-07"},"STAY-GREEN-like protein.","AT4G20440","smB",204.3,-1.5086,0.29519,-5.1106,{"v":3.21e-07,"d":"3.21E-07"},{"v":5.17e-06,"d":"5.17E-06"},"full_name=small nuclear ribonucleoprotein associated protein B. small nuclear ribonucleoprotein associated protein B."]
["AT1G19440","KCS4",590.03,-0.9429,0.14694,-6.4168,{"v":1.39e-10,"d":"1.39E-10"},{"v":2.29e-09,"d":"2.29E-09"},"full_name=3-ketoacyl-CoA synthase 4. 3-ketoacyl-CoA synthase 4. Encodes KCS4, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","AT5G42800","DFR",2915.1,0.84015,0.15076,5.5727,{"v":2.51E-8,"d":"2.51E-08"},{"v":4.11e-07,"d":"4.11E-07"},"full_name=dihydroflavonol 4-reductase. dihydroflavonol 4-reductase. dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins. Not expressed in roots (qRT-PCR).","AT1G06350","ADS4",62.16,-2.2565,0.44168,-5.1089,{"v":3.24e-07,"d":"3.24E-07"},{"v":5.2e-06,"d":"5.20E-06"},"full_name=delta 9 desaturase 4. Fatty acid desaturase family protein."]
["AT5G39080",null,54.862,4.0712,0.63471,6.4143,1.42E-10,{"v":2.32e-09,"d":"2.32E-09"},"HXXXD-type acyl-transferase family protein.","AT1G47570",null,882.83,0.80419,0.14439,5.5697,{"v":2.55E-8,"d":"2.55E-08"},{"v":4.17e-07,"d":"4.17E-07"},"RING/U-box superfamily protein.","AT1G33260",null,138.39,1.5856,0.31043,5.1076,{"v":3.26e-07,"d":"3.26E-07"},{"v":5.23e-06,"d":"5.23E-06"},"Protein kinase superfamily protein."]
["AT1G25275",null,257.47,1.4504,0.22657,6.4016,{"v":1.54e-10,"d":"1.54E-10"},{"v":2.51e-09,"d":"2.51E-09"},"thionin-like protein.","AT5G63310","NDPK2",1263.7,0.71691,0.12903,5.5561,{"v":2.76e-08,"d":"2.76E-08"},{"v":4.48e-07,"d":"4.48E-07"},"full_name=nucleoside diphosphate kinase 2. nucleoside diphosphate kinase 2. Maintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning.","AT2G19810","OZF1",455.13,0.94308,0.18497,5.0984,{"v":3.43e-07,"d":"3.43E-07"},{"v":5.46e-06,"d":"5.46E-06"},"full_name=Oxidation-related Zinc Finger 1. CCCH-type zinc finger family protein. Encodes Oxidation-related Zinc Finger 1 (OZF1), a plasma membrane protein involved in oxidative stress."]
["AT2G39390",null,1575.1,0.65084,0.10172,6.3985,1.57E-10,{"v":2.56e-09,"d":"2.56E-09"},"Ribosomal L29 family protein.","AT1G52245",null,67.929,2.0784,0.37414,5.5553,{"v":2.77E-8,"d":"2.77E-08"},{"v":4.5e-07,"d":"4.50E-07"},"dynein light chain LC6, flagellar outer arm-like protein.","AT2G36080","ABS2",455.03,-0.96746,0.18991,-5.0942,{"v":3.5e-07,"d":"3.50E-07"},{"v":5.57E-6,"d":"5.57E-06"},"full_name=ABNORMAL SHOOT 2. AP2/B3-like transcriptional factor family protein. Encodes a plant-specific B3 DNA-binding domain transcription factor. Has transcription repressor activity."]
["AT1G09420","G6PD4",1112.4,-0.8141,0.1274,-6.3903,1.66E-10,{"v":2.69E-9,"d":"2.69E-09"},"full_name=glucose-6-phosphate dehydrogenase 4. glucose-6-phosphate dehydrogenase 4. Encodes a protein similar to glucose-6-phosphate dehydrogenase but, based on amino acid differences in the active site and lack of activity, does not encode a functional G6PDH. The amino acid sequence for the consensus sequence of the G6PDH active site (DHYLGKE) differs in three places in this protein. gc exon splice site at 20574 is based on protein alignment, and is not confirmed experimentally.","AT2G06520","PSBX",2212.3,0.92248,0.16635,5.5455,{"v":2.93e-08,"d":"2.93E-08"},{"v":4.74e-07,"d":"4.74E-07"},"full_name=photosystem II subunit X. photosystem II subunit X. Encodes a protein with sequence similarity to the spinach photosystem II subunit PsbX.","AT3G17090","PP2C.D2",904.76,0.8097,0.15911,5.0888,{"v":3.6e-07,"d":"3.60E-07"},{"v":5.72e-06,"d":"5.72E-06"},"Protein phosphatase 2C family protein."]
["AT5G45390","CLPP4",1735,0.6481,0.1016,6.3789,{"v":1.78e-10,"d":"1.78E-10"},{"v":2.89e-09,"d":"2.89E-09"},"full_name=CLP protease P4. CLP protease P4. One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).","AT5G42200","ATL23",66.459,-2.5542,0.46131,-5.5368,{"v":3.08e-08,"d":"3.08E-08"},{"v":4.97e-07,"d":"4.97E-07"},"RING/U-box superfamily protein.","AT2G46550",null,925.37,0.73545,0.1447,5.0827,{"v":3.72E-7,"d":"3.72E-07"},{"v":5.88e-06,"d":"5.88E-06"},"transmembrane protein."]
["AT1G22160",null,121.64,2.0257,0.31804,6.3695,{"v":1.9e-10,"d":"1.90E-10"},{"v":3.06e-09,"d":"3.06E-09"},"senescence-associated family protein (DUF581).","AT3G56940","CRD1",3163.4,0.58038,0.10495,5.53,{"v":3.2e-08,"d":"3.20E-08"},{"v":5.15e-07,"d":"5.15E-07"},"full_name=COPPER RESPONSE DEFECT 1. dicarboxylate diiron protein, putative (Crd1). Encodes a putative ZIP protein with varying mRNA accumulation in leaves, stems and roots. Has a consensus carboxylate-bridged di-iron binding site.","AT2G26900","BASS2",688.95,-0.82606,0.16279,-5.0745,{"v":3.89E-7,"d":"3.89E-07"},{"v":6.12e-06,"d":"6.12E-06"},"full_name=bile acid:sodium symporter family protein 2. Sodium Bile acid symporter family."]
["AT1G18540",null,8107.3,0.46993,0.073789,6.3686,{"v":1.91e-10,"d":"1.91E-10"},{"v":3.08e-09,"d":"3.08E-09"},"Ribosomal protein L6 family protein.","AT5G15350","ENODL17",85.925,2.1167,0.38279,5.5295,{"v":3.21e-08,"d":"3.21E-08"},{"v":5.16e-07,"d":"5.16E-07"},"full_name=early nodulin-like protein 17. early nodulin-like protein 17.","AT2G16400","BLH7",211.63,-1.2272,0.24186,-5.0742,{"v":3.89E-7,"d":"3.89E-07"},{"v":6.13e-06,"d":"6.13E-06"},"full_name=BEL1-like homeodomain 7. BEL1-like homeodomain 7."]
["AT5G67620",null,80.072,-2.4051,0.3781,-6.361,{"v":2e-10,"d":"2.00E-10"},{"v":3.22E-9,"d":"3.22E-09"},"DUF4228 domain protein.","AT5G45940","NUDT11",72.222,2.0742,0.37625,5.5128,{"v":3.53e-08,"d":"3.53E-08"},{"v":5.64e-07,"d":"5.64E-07"},"full_name=nudix hydrolase homolog 11. nudix hydrolase homolog 11. Encodes a CoA pyrophosphatase, also has ppGpp pyrophosphohydrolase and exhibits minor activity of NADH pyrophosphatase. Most strongly expressed in embryo cotyledon and hypocotyl, flower, and phloem of vascular tissue. Over-expression mutant had a bigger plant with wider rosette.","AT5G39990","GLCAT14A",134.34,-1.5696,0.31016,-5.0605,{"v":4.18e-07,"d":"4.18E-07"},{"v":6.55E-6,"d":"6.55E-06"},"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein. Encodes GlcAT14A, a beta-glucuronosyltransferase involved in the biosynthesis of type II arabinogalactan. The protein was localized to the Golgi apparatus when transiently expressed in Nicotiana benthamiana. Plays a role in cell elongation during seedling growth."]
["AT3G02875","ILR1",1253.7,-0.86305,0.13589,-6.3513,{"v":2.14e-10,"d":"2.14E-10"},{"v":3.42e-09,"d":"3.42E-09"},"full_name=IAA-LEUCINE RESISTANT 1. Peptidase M20/M25/M40 family protein. Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors.","AT3G15357",null,289.96,-1.0649,0.19334,-5.5079,{"v":3.63e-08,"d":"3.63E-08"},{"v":5.79e-07,"d":"5.79E-07"},"phosphopantothenoylcysteine decarboxylase subunit.","AT1G13740","AFP2",155.13,1.4693,0.29064,5.0554,{"v":4.3e-07,"d":"4.30E-07"},{"v":6.71e-06,"d":"6.71E-06"},"full_name=ABI five binding protein 2. ABI five binding protein 2. Encodes a member of a small plant-specific gene family whose members interact with ABI5 and appear to be involved in mediating stress responses. AFP2 mutants affect a number of ABA mediated processes such as germination and response to osmotic and sugar stress. AFP2 nuclear localization is stress dependent."]
["AT2G44650","CHL-CPN10",741.34,0.83637,0.13184,6.3438,2.24E-10,{"v":3.58E-9,"d":"3.58E-09"},"full_name=chloroplast chaperonin 10. chloroplast chaperonin 10. Encodes a chloroplast-localized chaperonin 10 whose mRNA is expressed in leaves and stems but not roots.","AT1G35710",null,35.007,3.0937,0.56191,5.5057,{"v":3.68e-08,"d":"3.68E-08"},{"v":5.85e-07,"d":"5.85E-07"},"kinase family with leucine-rich repeat domain-containing protein.","AT5G20520","WAV2",558.82,0.84154,0.16652,5.0535,{"v":4.34E-7,"d":"4.34E-07"},{"v":6.76e-06,"d":"6.76E-06"},"full_name=WAVY GROWTH 2. alpha/beta-Hydrolases superfamily protein. Encodes a Bem46-like protein. WAV2 negatively regulates root bending when roots alter their growth direction. It's not involved in sensing environmental stimuli (e.g. gravity, light, water, touch)."]
["AT3G58660",null,1272.9,0.69751,0.11005,6.3384,2.32E-10,{"v":3.7E-9,"d":"3.70E-09"},"Ribosomal protein L1p/L10e family.","AT4G04840","MSRB6",81.268,-2.2302,0.40557,-5.4989,{"v":3.82e-08,"d":"3.82E-08"},{"v":6.07e-07,"d":"6.07E-07"},"full_name=methionine sulfoxide reductase B6. methionine sulfoxide reductase B6.","AT1G20190","EXPA11",135.12,1.592,0.31537,5.048,{"v":4.46E-7,"d":"4.46E-07"},{"v":6.95e-06,"d":"6.95E-06"},"full_name=expansin 11. expansin 11. member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)"]
["AT5G51550","EXL3",723.86,-0.90737,0.14329,-6.3325,{"v":2.41e-10,"d":"2.41E-10"},{"v":3.83e-09,"d":"3.83E-09"},"full_name=EXORDIUM like 3. EXORDIUM like 3.","AT5G25770",null,166.14,-1.3692,0.24938,-5.4905,{"v":4.01e-08,"d":"4.01E-08"},{"v":6.34e-07,"d":"6.34E-07"},"alpha/beta-Hydrolases superfamily protein.","AT2G16720","MYB7",60.956,2.3168,0.45977,5.039,{"v":4.68e-07,"d":"4.68E-07"},{"v":7.25E-6,"d":"7.25E-06"},"full_name=myb domain protein 7. myb domain protein 7. Encodes a member of MYB3R- and R2R3- type MYB- encoding gene family that acts as a repressor of flavonol biosynthesis. AtMYB7 gene expression is induced by salt treatment."]
["AT5G14570","NRT2.7",884.37,1.0841,0.17143,6.324,2.55E-10,{"v":4.03e-09,"d":"4.03E-09"},"full_name=high affinity nitrate transporter 2.7. high affinity nitrate transporter 2.7. Encodes ATNRT2.7, a nitrate transporter that controls nitrate content in seeds. Expression is detected in reproductive organs and peaks in seeds. Localized to the vacuolar membrane.","AT4G38740","ROC1",2483.8,-0.83548,0.15225,-5.4876,{"v":4.07E-8,"d":"4.07E-08"},{"v":6.42e-07,"d":"6.42E-07"},"full_name=rotamase CYP 1. rotamase CYP 1. Encodes cytosolic cyclophilin ROC1.","AT4G35920","MCA1",283.24,1.0779,0.21424,5.0315,{"v":4.87e-07,"d":"4.87E-07"},{"v":7.51e-06,"d":"7.51E-06"},"full_name=mid1-complementing activity 1. PLAC8 family protein. Encodes an integral plasma membrane protein. Functionally complements the yeast mid1 mutant, a deficiency of Ca2+ influx. Involved in Ca2+ influx and mechanical sensing in roots. An over-expression line showed increased Ca2+ uptake than the wild type plant. The primary root of a knock-out mutant failed to penetrate a harder agar medium from a softer medium."]
["AT5G53400","BOB1",1122.6,0.70446,0.11155,6.3154,2.69E-10,{"v":4.25E-9,"d":"4.25E-09"},"full_name=BOBBER1. HSP20-like chaperones superfamily protein. Encodes BOBBER1 (BOB1), a non-canonical small heat shock protein required for both development and thermotolerance. BOB1 is cytoplasmic at basal temperatures but forms heat shock granules containing canonical small heat shock proteins at high temperatures.","AT3G61560","RTNLB6",122.93,1.6949,0.30922,5.4812,{"v":4.22e-08,"d":"4.22E-08"},{"v":6.63e-07,"d":"6.63E-07"},"Reticulon family protein.","AT3G14220",null,1534.8,-0.68456,0.13609,-5.0302,{"v":4.9e-07,"d":"4.90E-07"},{"v":7.54e-06,"d":"7.54E-06"},"GDSL-like Lipase/Acylhydrolase superfamily protein."]
["AT5G21150","AGO9",135.62,-1.7715,0.28066,-6.3121,{"v":2.75e-10,"d":"2.75E-10"},{"v":4.34e-09,"d":"4.34E-09"},"full_name=ARGONAUTE 9. Argonaute family protein. AGO9-dependent sRNA silencing is crucial to specify cell fate in the Arabidopsis ovule. AGO9 is expressed in reproductive companion cells but not in the associated male or female gametes or their precursors. Therefore, AGO9 acts non-cell autonomously to silencing the activity of TEs activity in the female gametophyte.","AT4G04750",null,107,1.9364,0.35361,5.4761,{"v":4.35e-08,"d":"4.35E-08"},{"v":6.82e-07,"d":"6.82E-07"},"Major facilitator superfamily protein.","AT2G07690","MCM5",178.3,-1.2785,0.25421,-5.0291,{"v":4.93e-07,"d":"4.93E-07"},{"v":7.57e-06,"d":"7.57E-06"},"full_name=MINICHROMOSOME MAINTENANCE 5. Minichromosome maintenance (MCM2/3/5) family protein. Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin."]
["AT5G64350","FKBP12",2185.6,0.61243,0.097146,6.3043,{"v":2.9e-10,"d":"2.90E-10"},{"v":4.54e-09,"d":"4.54E-09"},"full_name=FK506-binding protein 12. FK506-binding protein 12. Encodes FK506-binding protein 12 (FKBP12 or FKP12). FKP12 overexpression dramatically enhances rapamycin sensitivity, whereas rapamycin inhibition is relieved in transgenic plants deficient in FKP12.","AT5G22340",null,602.74,0.78199,0.14316,5.4623,{"v":4.7e-08,"d":"4.70E-08"},{"v":7.34e-07,"d":"7.34E-07"},"NF-kappa-B inhibitor-like protein.","AT3G62980","TIR1",1174.5,0.69318,0.13792,5.0259,{"v":5.01e-07,"d":"5.01E-07"},{"v":7.67e-06,"d":"7.67E-06"},"full_name=TRANSPORT INHIBITOR RESPONSE 1. F-box/RNI-like superfamily protein. Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation. Mutations in TIR1 block auxin stimulation of flavonoid synthesis."]
["AT2G41550",null,374.55,-1.0696,0.16986,-6.2969,{"v":3.04e-10,"d":"3.04E-10"},{"v":4.75e-09,"d":"4.75E-09"},"Rho termination factor.","AT1G53100",null,38.252,-3.552,0.65103,-5.456,{"v":4.87e-08,"d":"4.87E-08"},{"v":7.58e-07,"d":"7.58E-07"},"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein.","AT3G61430","PIP1A",226.28,1.3318,0.26509,5.0238,{"v":5.06E-7,"d":"5.06E-07"},{"v":7.73e-06,"d":"7.73E-06"},"full_name=plasma membrane intrinsic protein 1A. plasma membrane intrinsic protein 1A. a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development."]
["AT3G56910","PSRP5",1258.5,0.74767,0.11881,6.2928,{"v":3.12e-10,"d":"3.12E-10"},{"v":4.87e-09,"d":"4.87E-09"},"full_name=plastid-specific 50S ribosomal protein 5. plastid-specific 50S ribosomal protein 5.","AT4G21550","VAL3",97.099,-2.0079,0.36817,-5.4537,{"v":4.93e-08,"d":"4.93E-08"},{"v":7.67e-07,"d":"7.67E-07"},"full_name=VP1/ABI3-like 3. VP1/ABI3-like 3.","AT4G05150",null,475.86,0.99254,0.19771,5.0203,{"v":5.16e-07,"d":"5.16E-07"},{"v":7.86e-06,"d":"7.86E-06"},"Octicosapeptide/Phox/Bem1p family protein."]
["AT4G21860","MSRB2",2146.2,-0.66771,0.10639,-6.2758,{"v":3.48e-10,"d":"3.48E-10"},{"v":5.41e-09,"d":"5.41E-09"},"full_name=methionine sulfoxide reductase B 2. methionine sulfoxide reductase B 2.","AT1G42970","GAPB",2179,0.60565,0.11117,5.4481,{"v":5.09e-08,"d":"5.09E-08"},{"v":7.89e-07,"d":"7.89E-07"},"full_name=glyceraldehyde-3-phosphate dehydrogenase B subunit. glyceraldehyde-3-phosphate dehydrogenase B subunit. Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase that can use both NADH and NADPH to reduce 1,3-diphosphate glycerate. It forms A2B2 heterotetramers with GapA forms of the GADPH enzyme. These complexes are active in the light under reducing conditions, but show reduced NADPH-dependent activity in response to oxidized thioredoxins and increased NAD(H)/NADP(H) ratios due to the formation of inactive A8B8 hexadecamers.","AT5G44635","MCM6",90.518,-1.8801,0.3749,-5.0149,{"v":5.31e-07,"d":"5.31E-07"},{"v":8.06e-06,"d":"8.06E-06"},"full_name=MINICHROMOSOME MAINTENANCE 6. minichromosome maintenance (MCM2/3/5) family protein."]
["AT3G48730","GSA2",1271.3,0.75294,0.12018,6.2652,{"v":3.72e-10,"d":"3.72E-10"},{"v":5.77e-09,"d":"5.77E-09"},"full_name=glutamate-1-semialdehyde 2,1-aminomutase 2. glutamate-1-semialdehyde 2,1-aminomutase 2.","AT3G26810","AFB2",447.57,0.87178,0.16031,5.438,{"v":5.39E-8,"d":"5.39E-08"},{"v":8.32e-07,"d":"8.32E-07"},"full_name=auxin signaling F-box 2. auxin signaling F-box 2.","AT1G24100","UGT74B1",102.89,-1.6725,0.33399,-5.0076,{"v":5.51E-7,"d":"5.51E-07"},{"v":8.34e-06,"d":"8.34E-06"},"full_name=UDP-glucosyl transferase 74B1. UDP-glucosyl transferase 74B1. Encodes a UDP-glucose:thiohydroximate S-glucosyltransferase, involved in glucosinolate biosynthesis"]
["AT2G22470","AGP2",307.73,1.3915,0.22239,6.2571,{"v":3.92e-10,"d":"3.92E-10"},{"v":6.06e-09,"d":"6.06E-09"},"full_name=arabinogalactan protein 2. arabinogalactan protein 2. Encodes arabinogalactan-protein (AGP2).","AT5G47640","NF-YB2",159.15,1.5828,0.29145,5.4308,{"v":5.61e-08,"d":"5.61E-08"},{"v":8.64e-07,"d":"8.64E-07"},"full_name=nuclear factor Y, subunit B2. nuclear factor Y, subunit B2.","AT3G22440",null,2515,0.66498,0.13313,4.995,{"v":5.88e-07,"d":"5.88E-07"},{"v":8.88e-06,"d":"8.88E-06"},"FRIGIDA-like protein."]
["AT3G15357",null,369.48,1.1777,0.18848,6.2484,{"v":4.15e-10,"d":"4.15E-10"},{"v":6.39e-09,"d":"6.39E-09"},"phosphopantothenoylcysteine decarboxylase subunit.","AT5G34850","PAP26",1009.1,0.67872,0.12519,5.4217,{"v":5.91E-8,"d":"5.91E-08"},{"v":9.06e-07,"d":"9.06E-07"},"full_name=purple acid phosphatase 26. purple acid phosphatase 26. Encodes a root-secreted purple acid phosphatase precursor involved in extracellular phosphate-scavenging.","AT5G20080",null,422.08,-0.90598,0.1818,-4.9833,{"v":6.25e-07,"d":"6.25E-07"},{"v":9.4e-06,"d":"9.40E-06"},"FAD/NAD(P)-binding oxidoreductase."]
["AT4G10380","NIP5;1",229.01,1.3457,0.21559,6.2423,{"v":4.31e-10,"d":"4.31E-10"},{"v":6.63e-09,"d":"6.63E-09"},"full_name=NOD26-like intrinsic protein 5;1. NOD26-like intrinsic protein 5;1. Boric acid channel. Essential for efficient boron uptake and plant development under boron limitation. Also functions in arsenite transport and tolerance. Localized preferentially in outer membrane domains of root cells.","AT1G17940",null,306.88,-1.1016,0.2034,-5.4158,{"v":6.1e-08,"d":"6.10E-08"},{"v":9.34e-07,"d":"9.34E-07"},"Endosomal targeting BRO1-like domain-containing protein.","AT1G22190","RAP2.4",252.95,1.1482,0.23069,4.9772,{"v":6.45e-07,"d":"6.45E-07"},{"v":9.68e-06,"d":"9.68E-06"},"Integrase-type DNA-binding superfamily protein. The gene encodes a putative transcription factor belongings to the abiotic stress-associated DREB A-6 clade."]
["AT1G09790","COBL6",55.96,-3.3838,0.5429,-6.2328,{"v":4.58e-10,"d":"4.58E-10"},{"v":7.03e-09,"d":"7.03E-09"},"full_name=COBRA-like protein 6 precursor. COBRA-like protein 6 precursor.","AT5G40390","SIP1",82.832,2.0479,0.37824,5.4143,{"v":6.15e-08,"d":"6.15E-08"},{"v":9.4E-7,"d":"9.40E-07"},"full_name=seed imbibition 1-like. Raffinose synthase family protein. Encodes a protein which might be involved in the formation of verbascose. A T-DNA insertion mutant was shown to have a decreased amount of verbascose (as well as mannitol) whereas the levels of raffinose and stachyose remained unchanged.","AT5G02350",null,97.144,-1.7163,0.34566,-4.9653,{"v":6.86e-07,"d":"6.86E-07"},{"v":1.03E-5,"d":"1.03E-05"},"Cysteine/Histidine-rich C1 domain family protein."]
["AT4G14695","MPC2",53.132,-3.2307,0.5185,-6.2309,4.64E-10,{"v":7.1e-09,"d":"7.10E-09"},"Uncharacterized protein family (UPF0041).","AT5G45930","CHLI2",531.75,0.81219,0.15024,5.406,{"v":6.45e-08,"d":"6.45E-08"},{"v":9.83e-07,"d":"9.83E-07"},"full_name=magnesium chelatase i2. magnesium chelatase i2. encodes a second Chl I gene (CHLI2), a subunit of magnesium chelatase which is required for chlorophyll biosynthesis. Has ATPase activity, regulated by TRX-f. Involved in the assembly of the Mg chelatase complex.","AT3G19860","bHLH121",521.52,0.92788,0.18697,4.9628,{"v":6.95e-07,"d":"6.95E-07"},{"v":1.04E-5,"d":"1.04E-05"},"full_name=basic Helix-Loop-Helix 121. basic helix-loop-helix (bHLH) DNA-binding superfamily protein."]
["AT1G69620","RPL34",4842.1,0.54907,0.088233,6.2229,{"v":4.88e-10,"d":"4.88E-10"},{"v":7.43e-09,"d":"7.43E-09"},"full_name=ribosomal protein L34. ribosomal protein L34. putative 60S ribosomal protein L34","AT4G02290","GH9B13",33.184,3.2034,0.59503,5.3836,{"v":7.3e-08,"d":"7.30E-08"},{"v":1.11E-6,"d":"1.11E-06"},"full_name=glycosyl hydrolase 9B13. glycosyl hydrolase 9B13.","AT3G56950","SIP2;1",84.786,-1.7682,0.35664,-4.9579,{"v":7.13e-07,"d":"7.13E-07"},{"v":1.06E-5,"d":"1.06E-05"},"full_name=small and basic intrinsic protein 2;1. small and basic intrinsic protein 2;1. One of the Major Intrinsic Proteins(MIPs) which facilitate the passive transport of small molecules across membranes.Belongs to a family of plant aquaporins.Similar to yeast and radish aquaporins. Located on ER."]
["AT2G43680","IQD14",2151.9,-0.60437,0.097218,-6.2166,5.08E-10,{"v":7.72e-09,"d":"7.72E-09"},"full_name=IQ-domain 14. IQ-domain 14.","AT1G73250","GER1",81.607,1.9732,0.36669,5.3812,{"v":7.4e-08,"d":"7.40E-08"},{"v":1.12e-06,"d":"1.12E-06"},"full_name=GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1. GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1. encodes a bifunctional 3, 5-epimerase-4-reductase in L-fucose synthesis and converts GDP-D-mannose to GDP-L-fucose in vitro along with MUR1 (GDP-D-mannose 4,6-dehydratase). It is expressed in all tissues examined, but most abundantly in roots and flowers.","AT5G48655",null,359.7,1.0118,0.20413,4.9565,{"v":7.18e-07,"d":"7.18E-07"},{"v":1.07e-05,"d":"1.07E-05"},"RING/U-box superfamily protein."]
["AT5G61590","DEWAX",766.87,-0.82342,0.13253,-6.2132,{"v":5.19e-10,"d":"5.19E-10"},{"v":7.87e-09,"d":"7.87E-09"},"Integrase-type DNA-binding superfamily protein. encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.","AT1G77370",null,402.42,-0.92799,0.17262,-5.3758,{"v":7.62e-08,"d":"7.62E-08"},{"v":1.15E-6,"d":"1.15E-06"},"Glutaredoxin family protein.","AT3G24040",null,135.27,-1.4025,0.2835,-4.9472,{"v":7.53e-07,"d":"7.53E-07"},{"v":1.11E-5,"d":"1.11E-05"},"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein."]
["AT3G07390","AIR12",452.95,1.0703,0.17254,6.2031,{"v":5.54e-10,"d":"5.54E-10"},{"v":8.37e-09,"d":"8.37E-09"},"full_name=Auxin-Induced in Root cultures 12. auxin-induced in root cultures-like protein. isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular.","AT3G54880",null,63.814,2.0862,0.38861,5.3683,{"v":7.95e-08,"d":"7.95E-08"},{"v":1.2e-06,"d":"1.20E-06"},"zinc finger protein.","AT4G13495",null,1170,-0.72065,0.14584,-4.9412,{"v":7.76e-07,"d":"7.76E-07"},{"v":1.15E-5,"d":"1.15E-05"},"other_RNA. Unknown gene"]
["AT3G48740","SWEET11",378.71,-1.3017,0.21015,-6.194,{"v":5.86e-10,"d":"5.86E-10"},{"v":8.83e-09,"d":"8.83E-09"},"Nodulin MtN3 family protein. Encodes a member of the SWEET sucrose efflux transporter family proteins.","AT1G78380","GSTU19",3815.2,-0.64477,0.1205,-5.351,{"v":8.75e-08,"d":"8.75E-08"},{"v":1.31E-6,"d":"1.31E-06"},"full_name=glutathione S-transferase TAU 19. glutathione S-transferase TAU 19. Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.","AT5G08570",null,1177.9,0.67997,0.13778,4.9351,{"v":8.01e-07,"d":"8.01E-07"},{"v":1.18e-05,"d":"1.18E-05"},"Pyruvate kinase family protein."]
["AT2G41730",null,59.598,6.8444,1.1064,6.1863,{"v":6.16e-10,"d":"6.16E-10"},{"v":9.25e-09,"d":"9.25E-09"},"calcium-binding site protein.","AT2G18710","SCY1",804.92,0.85514,0.15996,5.346,{"v":8.99e-08,"d":"8.99E-08"},{"v":1.35E-6,"d":"1.35E-06"},"full_name=SECY homolog 1. SECY homolog 1. Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid.","AT2G17230","EXL5",374.54,-0.9404,0.19076,-4.9296,{"v":8.24e-07,"d":"8.24E-07"},{"v":1.21e-05,"d":"1.21E-05"},"full_name=EXORDIUM like 5. EXORDIUM like 5."]
["AT3G61220","SDR1",561.77,-1.035,0.16746,-6.1807,{"v":6.38e-10,"d":"6.38E-10"},{"v":9.58e-09,"d":"9.58E-09"},"full_name=short-chain dehydrogenase/reductase 1. NAD(P)-binding Rossmann-fold superfamily protein. CytADR/SDR1 is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. It can also act on menthone and neomenthol in vitro, but these do not represent likely endogenous activities of this enzyme in planta. GFP-tagged CytADR appears to localize to the cytosol where it likely plays a role in detoxifying reactive carbonyls. sdr1 mutants have altered responses to pathogens.","AT5G67400","RHS19",22.846,8.3914,1.5703,5.3437,{"v":9.11e-08,"d":"9.11E-08"},{"v":1.36e-06,"d":"1.36E-06"},"full_name=root hair specific 19. root hair specific 19.","AT1G05680","UGT74E2",127.98,1.478,0.29996,4.9274,{"v":8.33e-07,"d":"8.33E-07"},{"v":1.22E-5,"d":"1.22E-05"},"full_name=Uridine diphosphate glycosyltransferase 74E2. Uridine diphosphate glycosyltransferase 74E2. Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment."]
["AT4G37910","mtHsc70-1",3431.7,0.55228,0.089476,6.1724,{"v":6.73e-10,"d":"6.73E-10"},{"v":1.01e-08,"d":"1.01E-08"},"full_name=mitochondrial heat shock protein 70-1. mitochondrial heat shock protein 70-1.","AT1G04420",null,525.2,0.80788,0.15123,5.342,{"v":9.19e-08,"d":"9.19E-08"},{"v":1.37E-6,"d":"1.37E-06"},"NAD(P)-linked oxidoreductase superfamily protein.","AT5G43760","KCS20",277.3,-1.0945,0.22246,-4.9198,{"v":8.66e-07,"d":"8.66E-07"},{"v":1.27E-5,"d":"1.27E-05"},"full_name=3-ketoacyl-CoA synthase 20. 3-ketoacyl-CoA synthase 20. Encodes KCS20, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids)."]
["AT1G07440",null,152.16,1.6878,0.27385,6.1631,{"v":7.13e-10,"d":"7.13E-10"},{"v":1.06e-08,"d":"1.06E-08"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT2G43780",null,367.5,-0.95556,0.17898,-5.339,{"v":9.35e-08,"d":"9.35E-08"},{"v":1.39E-6,"d":"1.39E-06"},"cytochrome oxidase assembly protein.","AT3G47800",null,776.87,-0.77579,0.15791,-4.9129,{"v":8.97e-07,"d":"8.97E-07"},{"v":1.3e-05,"d":"1.30E-05"},"Galactose mutarotase-like superfamily protein."]
["AT5G07180","ERL2",351.36,-1.083,0.17584,-6.1593,{"v":7.31e-10,"d":"7.31E-10"},{"v":1.09E-8,"d":"1.09E-08"},"full_name=ERECTA-like 2. ERECTA-like 2. Encodes a receptor-like kinase that, together with ER and ERL1 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is also important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. When heterozygous in an er/erl1 null background, plants are female sterile due to cell division defect in the integuments.","AT3G63200","PLP9",437.21,-1.037,0.19429,-5.3373,{"v":9.44e-08,"d":"9.44E-08"},{"v":1.4e-06,"d":"1.40E-06"},"full_name=PATATIN-like protein 9. PATATIN-like protein 9.","AT1G08420","BSL2",597.71,0.80607,0.1641,4.9121,{"v":9.01e-07,"d":"9.01E-07"},{"v":1.31E-5,"d":"1.31E-05"},"full_name=BRI1 suppressor 1 (BSU1)-like 2. BRI1 suppressor 1 (BSU1)-like 2."]
["AT5G65220","PRPL29",2111.5,0.698,0.11356,6.1467,{"v":7.91e-10,"d":"7.91E-10"},{"v":1.17e-08,"d":"1.17E-08"},"Ribosomal L29 family protein.","AT1G77690","LAX3",25.492,5.5428,1.0389,5.3351,{"v":9.55e-08,"d":"9.55E-08"},{"v":1.41e-06,"d":"1.41E-06"},"full_name=like AUX1 3. like AUX1 3. Encodes an auxin influx carrier LAX3 (Like Aux1) that promotes lateral root emergence. Auxin-induced expression of LAX3 in turn induces a selection of cell-wall-remodelling enzymes, which are likely to promote cell separation in advance of developing lateral root primordia.","AT5G35460",null,573.2,0.90852,0.18505,4.9096,{"v":9.13e-07,"d":"9.13E-07"},{"v":1.32e-05,"d":"1.32E-05"},"membrane protein."]
["AT4G35240",null,486.94,-0.94861,0.15464,-6.1343,{"v":8.55e-10,"d":"8.55E-10"},{"v":1.26E-8,"d":"1.26E-08"},"DNA-directed RNA polymerase subunit beta, putative (DUF630 and DUF632).","AT2G23150","NRAMP3",507.68,-0.86457,0.16218,-5.3311,{"v":9.76E-8,"d":"9.76E-08"},{"v":1.44E-6,"d":"1.44E-06"},"full_name=natural resistance-associated macrophage protein 3. natural resistance-associated macrophage protein 3. Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp4, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination.","AT5G06550","JMJ22",125.28,-1.4907,0.30382,-4.9067,{"v":9.26e-07,"d":"9.26E-07"},{"v":1.34E-5,"d":"1.34E-05"},"transferring glycosyl group transferase. Encodes a HR demethylase that acts as a positive regulator of seed germination in the PHYB-PIL5-SOM pathway."]
["AT1G04830",null,758.5,-0.88169,0.14405,-6.1207,{"v":9.32e-10,"d":"9.32E-10"},{"v":1.37E-8,"d":"1.37E-08"},"Ypt/Rab-GAP domain of gyp1p superfamily protein.","AT2G02710","PLPB",329.65,-1.0062,0.1889,-5.3264,{"v":1e-07,"d":"1.00E-07"},{"v":1.47e-06,"d":"1.47E-06"},"full_name=PAS/LOV protein B. PAS/LOV protein B. Encodes a putative blue light receptor protein.","AT4G33930",null,25.688,5.0255,1.0262,4.8972,{"v":9.72e-07,"d":"9.72E-07"},{"v":1.4E-5,"d":"1.40E-05"},"Cupredoxin superfamily protein. Encodes a protein with 14.6% glycine residues, similar to hyphally regulated protein from Candida albicans, PIR2:S58135"]
["AT5G42980","TRX3",16237,-0.47606,0.077795,-6.1194,{"v":9.39e-10,"d":"9.39E-10"},{"v":1.38e-08,"d":"1.38E-08"},"full_name=thioredoxin 3. thioredoxin 3. encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.","AT3G07320",null,585.05,0.9393,0.17644,5.3237,{"v":1.02E-7,"d":"1.02E-07"},{"v":1.49e-06,"d":"1.49E-06"},"O-Glycosyl hydrolases family 17 protein.","AT3G03341",null,249.64,3.9293,0.80264,4.8955,{"v":9.81e-07,"d":"9.81E-07"},{"v":1.41e-05,"d":"1.41E-05"},"cold-regulated protein."]
["AT2G24590","RSZ22a",515.68,0.90354,0.14771,6.1172,{"v":9.53e-10,"d":"9.53E-10"},{"v":1.4E-8,"d":"1.40E-08"},"full_name=RS-containing zinc finger protein 22a. RNA recognition motif and CCHC-type zinc finger domains containing protein. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926.","AT5G25460","DGR2",3746,0.63715,0.11979,5.3188,{"v":1.04E-7,"d":"1.04E-07"},{"v":1.53E-6,"d":"1.53E-06"},"full_name=DUF642 L-GalL responsive gene 2. transmembrane protein, putative (Protein of unknown function, DUF642).","AT2G35760","CASPL2B2",42.849,2.7009,0.55193,4.8936,{"v":9.9e-07,"d":"9.90E-07"},{"v":1.42E-5,"d":"1.42E-05"},"Uncharacterized protein family (UPF0497)."]
["AT1G12600",null,168.4,-2.0386,0.33401,-6.1035,{"v":1.04e-09,"d":"1.04E-09"},{"v":1.52E-8,"d":"1.52E-08"},"UDP-N-acetylglucosamine (UAA) transporter family.","AT3G49670","BAM2",79.59,1.828,0.34447,5.3066,{"v":1.12E-7,"d":"1.12E-07"},{"v":1.63e-06,"d":"1.63E-06"},"full_name=BARELY ANY MERISTEM 2. Leucine-rich receptor-like protein kinase family protein. Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM1,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM2 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs.","AT1G52000",null,336.66,-0.95685,0.19582,-4.8863,{"v":1.03e-06,"d":"1.03E-06"},{"v":1.47E-5,"d":"1.47E-05"},"Mannose-binding lectin superfamily protein."]
["AT4G00810","RPP1B",1117.7,0.76294,0.12503,6.102,{"v":1.05e-09,"d":"1.05E-09"},{"v":1.53e-08,"d":"1.53E-08"},"60S acidic ribosomal protein family.","AT1G61840",null,26.504,4.5525,0.85942,5.2971,{"v":1.18E-7,"d":"1.18E-07"},{"v":1.71e-06,"d":"1.71E-06"},"Cysteine/Histidine-rich C1 domain family protein.","AT3G13225","FNBP4",478.43,0.84437,0.17281,4.8861,{"v":1.03e-06,"d":"1.03E-06"},{"v":1.47E-5,"d":"1.47E-05"},"WW domain-containing protein."]
["AT5G23310","FSD3",985.77,0.85534,0.14026,6.0983,{"v":1.07E-9,"d":"1.07E-09"},{"v":1.56e-08,"d":"1.56E-08"},"full_name=Fe superoxide dismutase 3. Fe superoxide dismutase 3. Fe superoxide dismutase","AT3G56880",null,451.46,-0.89425,0.16891,-5.2942,{"v":1.2e-07,"d":"1.20E-07"},{"v":1.73E-6,"d":"1.73E-06"},"VQ motif-containing protein.","AT3G04740","SWP",463.61,0.91535,0.1875,4.8819,{"v":1.05e-06,"d":"1.05E-06"},{"v":1.49E-5,"d":"1.49E-05"},"full_name=STRUWWELPETER. RNA polymerase II transcription mediator. encodes a protein with similarities to subunits of the Mediator complex, required for RNA polymerase II recruitment at target promoters in response to specific activators. Lines carrying loss of function mutations in the gene have reduced cell numbers in aerial organs. On the other hand, lines overexpressing the gene have increased number of small cells in clusters, suggesting cell division is more unsynchronized in the overexpressors.Required for expression of CBF-controlled cold-responsive genes. Required for recruitment of the Mediator complex and RNA polymerase II to CBF-controlled cold-responsive genes. Required for expression of some dark-upregulated genes."]
["AT4G28760","TRM20",1316.9,-0.75315,0.12367,-6.0899,{"v":1.13E-9,"d":"1.13E-09"},{"v":1.64e-08,"d":"1.64E-08"},"full_name=TON1 Recruiting Motif 20. methyl-coenzyme M reductase II subunit gamma, putative (DUF3741).","AT4G02940","ALKBH10B",493,-0.86493,0.16392,-5.2765,{"v":1.32e-07,"d":"1.32E-07"},{"v":1.9E-6,"d":"1.90E-06"},"oxidoreductase, 2OG-Fe(II) oxygenase family protein.","AT3G28290","AT14A",147.48,23.339,4.7851,4.8774,{"v":1.08E-6,"d":"1.08E-06"},{"v":1.52E-5,"d":"1.52E-05"},"transmembrane protein, putative (DUF677). Encodes a protein with sequence similarity to integrins. Localized to the cytoplasm and plasma membrane. Expressed in all tissues assayed."]
["AT2G30500","NET4B",1969.6,-0.6631,0.10916,-6.0744,{"v":1.24e-09,"d":"1.24E-09"},{"v":1.8e-08,"d":"1.80E-08"},"full_name=Networked 4B. Kinase interacting (KIP1-like) family protein.","AT5G58010","LRL3",23.094,8.4026,1.594,5.2713,{"v":1.35E-7,"d":"1.35E-07"},{"v":1.95E-6,"d":"1.95E-06"},"full_name=LJRHL1-like 3. LJRHL1-like 3. Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1), At4g30980 (AtLRL2), and At5g58010 (AtLRL3).","AT5G26760","RIMA",379.24,0.92578,0.18995,4.8737,{"v":1.1e-06,"d":"1.10E-06"},{"v":1.55e-05,"d":"1.55E-05"},"RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein."]
["AT4G27090","RPL14B",8811.2,0.64243,0.10584,6.0695,{"v":1.28e-09,"d":"1.28E-09"},{"v":1.85E-8,"d":"1.85E-08"},"Ribosomal protein L14.","AT5G45680","FKBP13",270.95,1.2078,0.22954,5.262,{"v":1.43E-7,"d":"1.43E-07"},{"v":2.05e-06,"d":"2.05E-06"},"full_name=FK506-binding protein 13. FK506-binding protein 13. Peptidyl-Prolyl Isomerase located in chloroplast thylakoid lumen","AT3G47370",null,866.31,-0.76055,0.15637,-4.8639,{"v":1.15E-6,"d":"1.15E-06"},{"v":1.62e-05,"d":"1.62E-05"},"Ribosomal protein S10p/S20e family protein."]
["AT2G34790","MEE23",292.14,-1.9134,0.31531,-6.0683,{"v":1.29e-09,"d":"1.29E-09"},{"v":1.86e-08,"d":"1.86E-08"},"full_name=MATERNAL EFFECT EMBRYO ARREST 23. FAD-binding Berberine family protein.","AT4G00460","ROPGEF3",30.744,3.5584,0.67637,5.261,{"v":1.43E-7,"d":"1.43E-07"},{"v":2.06e-06,"d":"2.06E-06"},"full_name=ROP (rho of plants) guanine nucleotide exchange factor 3. RHO guanyl-nucleotide exchange factor 3. Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.","AT2G18440","GUT15",5542,0.73937,0.1521,4.8611,{"v":1.17E-6,"d":"1.17E-06"},{"v":1.64e-05,"d":"1.64E-05"},"other_RNA. Encodes a noncoding RNA, a member of an emerging class of transcripts that lack significant open reading frames and encode RNA as their final product."]
["AT5G15780",null,11988,-0.45936,0.075801,-6.0601,{"v":1.36e-09,"d":"1.36E-09"},{"v":1.96E-8,"d":"1.96E-08"},"Pollen Ole e 1 allergen and extensin family protein.","AT4G10560","MEE53",42.171,2.6144,0.49734,5.2567,{"v":1.47e-07,"d":"1.47E-07"},{"v":2.1e-06,"d":"2.10E-06"},"full_name=maternal effect embryo arrest 53. Cysteine/Histidine-rich C1 domain family protein.","AT4G11660","AT-HSFB2B",208.87,1.1853,0.24431,4.8516,{"v":1.22E-6,"d":"1.22E-06"},{"v":1.72e-05,"d":"1.72E-05"},"winged-helix DNA-binding transcription factor family protein. member of Heat Stress Transcription Factor (Hsf) family"]
["AT4G28570",null,86.005,2.1916,0.36196,6.0549,{"v":1.41e-09,"d":"1.41E-09"},{"v":2.01e-08,"d":"2.01E-08"},"Long-chain fatty alcohol dehydrogenase family protein.","AT4G26220","CCOAOMT7",37.933,-4.2162,0.80289,-5.2513,{"v":1.51e-07,"d":"1.51E-07"},{"v":2.15e-06,"d":"2.15E-06"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. Encodes a caffeoyl-coenzyme A O-methyltransferase (CCoAOMT)-like protein with a strong preference for methylating the para position of flavanones and dihydroflavonols, whereas flavones and flavonols are methylated in the meta-position.","AT1G78500","PEN6",39.436,3.2945,0.68025,4.843,{"v":1.28E-6,"d":"1.28E-06"},{"v":1.79e-05,"d":"1.79E-05"},"Terpenoid cyclases family protein. Encodes a protein with pentacyclic triterpene synthase activity. In addition to the compounds lupeol, &#945;-amyrin and bauerenol, this enzyme was also shown to produce two <i>seco</i>-triterpenes: &#945;- and &#946;-<i>seco</i>-amyrin."]
["AT1G80270","PPR596",541.81,1.1246,0.1859,6.0498,{"v":1.45E-9,"d":"1.45E-09"},{"v":2.07E-8,"d":"2.07E-08"},"full_name=PENTATRICOPEPTIDE REPEAT 596. PENTATRICOPEPTIDE REPEAT 596.","AT2G27690","CYP94C1",83.689,-1.9428,0.37021,-5.2478,{"v":1.54E-7,"d":"1.54E-07"},{"v":2.19e-06,"d":"2.19E-06"},"full_name=cytochrome P450, family 94, subfamily C, polypeptide 1. cytochrome P450, family 94, subfamily C, polypeptide 1. Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.","AT4G13530",null,251.35,1.3733,0.28361,4.8423,{"v":1.28E-6,"d":"1.28E-06"},{"v":1.79e-05,"d":"1.79E-05"},"transmembrane protein."]
["AT3G52380","CP33",2066.4,0.62049,0.10263,6.0457,{"v":1.49E-9,"d":"1.49E-09"},{"v":2.12e-08,"d":"2.12E-08"},"full_name=chloroplast RNA-binding protein 33. chloroplast RNA-binding protein 33. chloroplast RNA-binding protein","AT1G08520","ALB1",1257.6,0.72546,0.13834,5.2439,{"v":1.57e-07,"d":"1.57E-07"},{"v":2.23e-06,"d":"2.23E-06"},"full_name=ALBINA 1. ALBINA 1. Encodes the CHLD subunit of the Mg-chelatase enzyme involved in chlorophyll biosynthesis. Lines carrying recessive mutations of this locus are white and seedling lethal.","AT2G03090","EXPA15",1858.4,0.83584,0.17285,4.8355,{"v":1.33E-6,"d":"1.33E-06"},{"v":1.85e-05,"d":"1.85E-05"},"full_name=expansin A15. expansin A15. member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana."]
["AT1G65340","CYP96A3",68.059,2.9652,0.49079,6.0416,{"v":1.53e-09,"d":"1.53E-09"},{"v":2.17e-08,"d":"2.17E-08"},"full_name=cytochrome P450, family 96, subfamily A, polypeptide 3. cytochrome P450, family 96, subfamily A, polypeptide 3. member of CYP96A","AT5G19690","STT3A",1373,0.68864,0.13155,5.2347,{"v":1.65e-07,"d":"1.65E-07"},{"v":2.34E-6,"d":"2.34E-06"},"full_name=staurosporin and temperature sensitive 3-like A. staurosporin and temperature sensitive 3-like A. encodes an oligosaccharyl transferase involved response to high salt. Mutants are hypersensitive to high salt conditions","AT3G60630","HAM2",216.1,-1.1766,0.24351,-4.8319,{"v":1.35E-6,"d":"1.35E-06"},{"v":1.88E-5,"d":"1.88E-05"},"full_name=HAIRY MERISTEM 2. GRAS family transcription factor. Belongs to one of the LOM (LOST MERISTEMS) genes: AT2G45160 (LOM1), AT3G60630 (LOM2) and AT4G00150 (LOM3). LOM1 and LOM2 promote cell differentiation at the periphery of shoot meristems and help to maintain their polar organization."]
["AT3G56050",null,561.13,-1.0008,0.16593,-6.0314,{"v":1.63E-9,"d":"1.63E-09"},{"v":2.3e-08,"d":"2.30E-08"},"Protein kinase family protein.","AT1G55920","SERAT2;1",132.19,-1.9292,0.36914,-5.2262,{"v":1.73E-7,"d":"1.73E-07"},{"v":2.44e-06,"d":"2.44E-06"},"full_name=serine acetyltransferase 2;1. serine acetyltransferase 2;1. Encodes a chloroplast/cytosol localized serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.","AT4G24830",null,531.55,-0.82666,0.17128,-4.8264,{"v":1.39E-6,"d":"1.39E-06"},{"v":1.92e-05,"d":"1.92E-05"},"arginosuccinate synthase family."]
["AT5G07460","PMSR2",507.64,-0.94766,0.15727,-6.0259,{"v":1.68E-9,"d":"1.68E-09"},{"v":2.38e-08,"d":"2.38E-08"},"full_name=peptidemethionine sulfoxide reductase 2. peptidemethionine sulfoxide reductase 2. ubiquitous enzyme that repairs oxidatively damaged proteins. Methionine sulfoxide reductase activity. Mutant lacking reductase activity showed increased protein oxidation, nitration and glycation of specific amino acid residues during darkness.","AT3G07770","Hsp89.1",1728.6,-0.57727,0.11057,-5.2209,{"v":1.78e-07,"d":"1.78E-07"},{"v":2.51e-06,"d":"2.51E-06"},"full_name=HEAT SHOCK PROTEIN 89.1. HEAT SHOCK PROTEIN 89.1.","AT2G34070","TBL37",171.45,1.2668,0.26279,4.8207,{"v":1.43e-06,"d":"1.43E-06"},{"v":1.97e-05,"d":"1.97E-05"},"full_name=TRICHOME BIREFRINGENCE-LIKE 37. TRICHOME BIREFRINGENCE-LIKE 37. Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication)."]
["AT2G35130","PPR_66",242.86,1.3464,0.22347,6.025,{"v":1.69E-9,"d":"1.69E-09"},{"v":2.39e-08,"d":"2.39E-08"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT5G14740","CA2",20.738,8.2527,1.5817,5.2177,{"v":1.81e-07,"d":"1.81E-07"},{"v":2.55e-06,"d":"2.55E-06"},"full_name=carbonic anhydrase 2. carbonic anhydrase 2. Encodes a beta carbonic anhydrase likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform.","AT2G42790","CSY3",5438.9,0.5789,0.12011,4.8197,{"v":1.44E-6,"d":"1.44E-06"},{"v":1.98E-5,"d":"1.98E-05"},"full_name=citrate synthase 3. citrate synthase 3. Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development."]
["AT5G15230","GASA4",441.26,1.0543,0.17527,6.0155,{"v":1.79E-9,"d":"1.79E-09"},{"v":2.52e-08,"d":"2.52E-08"},"full_name=GAST1 protein homolog 4. GAST1 protein homolog 4. Encodes gibberellin-regulated protein GASA4. Promotes GA responses and exhibits redox activity.","AT3G03620",null,94.501,-2.5339,0.48628,-5.2107,{"v":1.88e-07,"d":"1.88E-07"},{"v":2.64e-06,"d":"2.64E-06"},"MATE efflux family protein.","AT5G15780",null,2863.3,0.71398,0.14817,4.8186,{"v":1.45e-06,"d":"1.45E-06"},{"v":1.99e-05,"d":"1.99E-05"},"Pollen Ole e 1 allergen and extensin family protein."]
["AT4G25170",null,1875.1,0.66556,0.11075,6.0094,{"v":1.86E-9,"d":"1.86E-09"},{"v":2.62E-8,"d":"2.62E-08"},"Uncharacterized conserved protein (UCP012943).","AT1G06000","UGT89C1",274.1,-1.0321,0.19818,-5.2078,{"v":1.91E-7,"d":"1.91E-07"},{"v":2.67e-06,"d":"2.67E-06"},"UDP-Glycosyltransferase superfamily protein. encodes a flavonol-7-O-rhamnosyltransferase involved in the formation of rhamnosylated flavonols","AT2G48100",null,764.69,0.77569,0.16108,4.8155,{"v":1.47e-06,"d":"1.47E-06"},{"v":2.01e-05,"d":"2.01E-05"},"Exonuclease family protein."]
["AT1G73210",null,570.74,-1.0498,0.17489,-6.0025,{"v":1.94e-09,"d":"1.94E-09"},{"v":2.72e-08,"d":"2.72E-08"},"hypothetical protein (DUF789).","AT3G44260","CAF1a",70.365,-2.5908,0.49898,-5.1922,{"v":2.08e-07,"d":"2.08E-07"},{"v":2.89e-06,"d":"2.89E-06"},"full_name=CCR4- associated factor 1a. Polynucleotidyl transferase, ribonuclease H-like superfamily protein. Encodes one of the homologs of the yeast CCR4-associated factor 1: AT3G44260 (CAF1a), AT5G22250 (CAF1b). Has mRNA deadenylation activity. Also plays a role in plant defense responses.","AT2G38540","LP1",4963.1,0.74779,0.15556,4.8073,{"v":1.53E-6,"d":"1.53E-06"},{"v":2.09E-5,"d":"2.09E-05"},"full_name=lipid transfer protein 1. lipid transfer protein 1. Non-specific lipid transfer protein. Binds calmodulin in a Ca2+-independent manner. Localized to the cell wall. Specifically expressed in L1 epidermal layer. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15."]
["AT2G40290",null,974.49,0.72531,0.1209,5.9994,{"v":1.98e-09,"d":"1.98E-09"},{"v":2.77E-8,"d":"2.77E-08"},"Eukaryotic translation initiation factor 2 subunit 1. Encodes an eIF2alpha homolog that can be phosphorylated by GCN2 in vitro.","AT5G22810",null,105.84,-1.7883,0.34468,-5.1883,{"v":2.12e-07,"d":"2.12E-07"},{"v":2.95e-06,"d":"2.95E-06"},"GDSL-like lipase/acylhydrolase superfamily protein.","AT2G34030",null,25.845,5.636,1.1727,4.8062,{"v":1.54e-06,"d":"1.54E-06"},{"v":2.1e-05,"d":"2.10E-05"},"Calcium-binding EF-hand family protein."]
["AT1G61570","TIM13",758.05,0.7893,0.13164,5.9957,{"v":2.03e-09,"d":"2.03E-09"},{"v":2.82e-08,"d":"2.82E-08"},"full_name=translocase of the inner mitochondrial membrane 13. translocase of the inner mitochondrial membrane 13. Encodes a putative small zinc finger-like protein (TIM13); nucleus-encoded gene whose product is found in the mitochondrial inner membrane space.","AT1G50260","NTMC2T5.1",285.19,-1.0683,0.20605,-5.1845,{"v":2.17E-7,"d":"2.17E-07"},{"v":3e-06,"d":"3.00E-06"},"full_name=N-terminal-transmembrane-C2 domain type 5.1. N-terminal-transmembrane-C2 domain type 5.1.","AT3G22840","ELIP1",5471.4,3.6078,0.75155,4.8004,{"v":1.58e-06,"d":"1.58E-06"},{"v":2.15e-05,"d":"2.15E-05"},"full_name=EARLY LIGHT-INDUCABLE PROTEIN. Chlorophyll A-B binding family protein. Encodes an early light-inducible protein."]
["AT1G28520","VOZ1",782.3,-0.77268,0.12912,-5.9841,{"v":2.18e-09,"d":"2.18E-09"},{"v":3.02e-08,"d":"3.02E-08"},"full_name=vascular plant one zinc finger protein. vascular plant one zinc finger protein.","AT2G40435",null,147.5,-1.3604,0.26304,-5.1717,{"v":2.32e-07,"d":"2.32E-07"},{"v":3.21e-06,"d":"3.21E-06"},"transcription factor SCREAM-like protein.","AT3G59770","SAC9",732.61,0.80754,0.16858,4.7902,{"v":1.67e-06,"d":"1.67E-06"},{"v":2.26E-5,"d":"2.26E-05"},"full_name=SUPPRESSOR OF ACTIN 9. sacI homology domain-containing protein / WW domain-containing protein. Encodes a phosphoinositide phosphatase. The sac9 null mutant accumulates elevated levels of PtdIns(4,5)P2 and Ins(1,4,5)P3. The mutant plants have characteristics of constitutive stress responses."]
["AT2G28650","EXO70H8",141.7,-2.4112,0.4034,-5.9771,{"v":2.27e-09,"d":"2.27E-09"},{"v":3.14e-08,"d":"3.14E-08"},"full_name=exocyst subunit exo70 family protein H8. exocyst subunit exo70 family protein H8. A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.","AT5G40950","RPL27",1636.1,0.58141,0.1125,5.1681,{"v":2.36E-7,"d":"2.36E-07"},{"v":3.26e-06,"d":"3.26E-06"},"full_name=ribosomal protein large subunit 27. ribosomal protein large subunit 27.","AT5G52650",null,1702.2,-0.63478,0.13284,-4.7785,{"v":1.77E-6,"d":"1.77E-06"},{"v":2.39e-05,"d":"2.39E-05"},"RNA binding Plectin/S10 domain-containing protein."]
["AT5G11520","ASP3",5227.3,0.60234,0.10081,5.9751,{"v":2.3e-09,"d":"2.30E-09"},{"v":3.17e-08,"d":"3.17E-08"},"full_name=aspartate aminotransferase 3. aspartate aminotransferase 3. Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves.","AT5G57180","CIA2",679.12,0.88593,0.17164,5.1616,{"v":2.45e-07,"d":"2.45E-07"},{"v":3.37e-06,"d":"3.37E-06"},"full_name=chloroplast import apparatus 2. chloroplast import apparatus 2. Transcription regulator responsible for specific upregulation of the translocon genes atToc33 and atToc75 in leaves. Involved in protein import into chloroplast.","AT1G27970","NTF2B",267.42,-1.0936,0.22889,-4.7778,{"v":1.77E-6,"d":"1.77E-06"},{"v":2.39e-05,"d":"2.39E-05"},"full_name=nuclear transport factor 2B. nuclear transport factor 2B. Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport."]
["AT1G14320","SAC52",10220,0.47383,0.079328,5.9731,{"v":2.33E-9,"d":"2.33E-09"},{"v":3.21e-08,"d":"3.21E-08"},"full_name=SUPPRESSOR OF ACAULIS 52. Ribosomal protein L16p/L10e family protein. Encodes a ribosomal protein L10 and may be involved in translation regulation. Semi-dominant mutations in SAC552 can suppress defects in acaulis5, which encodes a thermospermine synthase, by enhancing translation of acl5 and itself.","AT2G47750","GH3.9",29.801,-7.9129,1.5358,-5.1524,{"v":2.57e-07,"d":"2.57E-07"},{"v":3.53e-06,"d":"3.53E-06"},"full_name=putative indole-3-acetic acid-amido synthetase GH3.9. putative indole-3-acetic acid-amido synthetase GH3.9. Encodes GH3.9, a member of the GH3 family auxin-responsive genes. gh3.9-1 mutants had greater primary root length, increased sensitivity to indole-3-acetic acid (IAA)-mediated root growth inhibition, but no obvious effects on apical dominance or leaf morphology.","AT1G61340","FBS1",532.77,3.1457,0.65901,4.7734,{"v":1.81E-6,"d":"1.81E-06"},{"v":2.44E-5,"d":"2.44E-05"},"full_name=F-box stress induced 1. F-box family protein. Encodes a F-box protein induced by various biotic or abiotic stress."]
["AT5G20160",null,1959.9,0.75528,0.12654,5.9688,{"v":2.39e-09,"d":"2.39E-09"},{"v":3.29e-08,"d":"3.29E-08"},"Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein.","AT3G22330","PMH2",982.9,-0.64292,0.12481,-5.1511,{"v":2.59e-07,"d":"2.59E-07"},{"v":3.55e-06,"d":"3.55E-06"},"full_name=putative mitochondrial RNA helicase 2. putative mitochondrial RNA helicase 2. DEAD-box protein required for efficient group II intron splicing in mitochondria.","AT1G74210","GDPD5",168.84,-1.2317,0.25815,-4.7712,{"v":1.83e-06,"d":"1.83E-06"},{"v":2.46e-05,"d":"2.46E-05"},"full_name=glycerophosphodiester phosphodiesterase 5. PLC-like phosphodiesterases superfamily protein. Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family."]
["AT2G25280",null,627.67,-0.87889,0.1477,-5.9506,{"v":2.67e-09,"d":"2.67E-09"},{"v":3.66e-08,"d":"3.66E-08"},"AmmeMemoRadiSam system protein B.","AT2G20370","MUR3",299.53,0.96077,0.18684,5.1422,{"v":2.72E-7,"d":"2.72E-07"},{"v":3.71e-06,"d":"3.71E-06"},"full_name=MURUS 3. Exostosin family protein. Encodes a xyloglucan galactosyltransferase located in the membrane of Golgi stacks that is involved in the biosynthesis of fucose. It is also involved in endomembrane organization. It is suggested that it is a dual-function protein that is responsible for actin organization and the synthesis of cell wall materials.","AT4G34440","PERK5",18.312,7.6302,1.602,4.763,{"v":1.91e-06,"d":"1.91E-06"},{"v":2.55E-5,"d":"2.55E-05"},"full_name=proline-rich extensin-like receptor kinase 5. Protein kinase superfamily protein. Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807)."]
["AT1G23200","HMS",475.85,-1.0074,0.16953,-5.9423,{"v":2.81E-9,"d":"2.81E-09"},{"v":3.84E-8,"d":"3.84E-08"},"Plant invertase/pectin methylesterase inhibitor superfamily. Encodes a pectin methyl esterase involved in embryo development.","AT3G15520",null,246.53,1.1722,0.22806,5.1401,{"v":2.75e-07,"d":"2.75E-07"},{"v":3.74e-06,"d":"3.74E-06"},"Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein.","AT1G23780",null,540.69,1.1329,0.23824,4.7554,{"v":1.98e-06,"d":"1.98E-06"},{"v":2.64e-05,"d":"2.64E-05"},"F-box family protein."]
["AT5G02260","EXPA9",217.46,1.5193,0.25578,5.9399,{"v":2.85e-09,"d":"2.85E-09"},{"v":3.89e-08,"d":"3.89E-08"},"full_name=expansin A9. expansin A9. member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)","AT5G03630","ATMDAR2",1036.3,0.72034,0.14034,5.1327,{"v":2.86e-07,"d":"2.86E-07"},{"v":3.88e-06,"d":"3.88E-06"},"Pyridine nucleotide-disulfide oxidoreductase family protein.","AT2G45430","AHL22",145.2,-1.3273,0.2794,-4.7506,{"v":2.03E-6,"d":"2.03E-06"},{"v":2.7e-05,"d":"2.70E-05"},"full_name=AT-hook motif nuclear-localized protein 22. AT-hook motif nuclear-localized protein 22. Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis."]
["AT4G38540",null,241.19,1.2584,0.21229,5.9279,{"v":3.07e-09,"d":"3.07E-09"},{"v":4.17e-08,"d":"4.17E-08"},"FAD/NAD(P)-binding oxidoreductase family protein.","AT1G80330","GA3OX4",28.283,3.4731,0.67697,5.1303,{"v":2.89e-07,"d":"2.89E-07"},{"v":3.92e-06,"d":"3.92E-06"},"full_name=gibberellin 3-oxidase 4. gibberellin 3-oxidase 4. Encodes a protein with gibberellin 3-oxidase activity. The enzyme, expressed and purified in E.coli, was shown to catalyze the 3&#946;-hydroxylation of GA20 into GA29.","AT4G14090",null,545.96,-0.87138,0.18366,-4.7445,{"v":2.09e-06,"d":"2.09E-06"},{"v":2.78e-05,"d":"2.78E-05"},"UDP-Glycosyltransferase superfamily protein. The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring."]
["AT5G66080","APD9",71.313,2.4005,0.40524,5.9236,{"v":3.15e-09,"d":"3.15E-09"},{"v":4.27e-08,"d":"4.27E-08"},"Protein phosphatase 2C family protein.","AT1G67760",null,51.732,2.553,0.49817,5.1247,{"v":2.98e-07,"d":"2.98E-07"},{"v":4.02e-06,"d":"4.02E-06"},"TCP-1/cpn60 chaperonin family protein.","AT1G11175",null,153.49,1.4858,0.3139,4.7333,{"v":2.21E-6,"d":"2.21E-06"},{"v":2.92e-05,"d":"2.92E-05"},"other_RNA."]
["AT5G61520",null,50.707,3.5008,0.59133,5.9202,{"v":3.22E-9,"d":"3.22E-09"},{"v":4.35e-08,"d":"4.35E-08"},"Major facilitator superfamily protein.","AT5G24530","DMR6",164.41,1.436,0.28055,5.1187,{"v":3.08e-07,"d":"3.08E-07"},{"v":4.15e-06,"d":"4.15E-06"},"full_name=DOWNY MILDEW RESISTANT 6. 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew.","AT5G43260",null,118.75,1.4763,0.31216,4.7292,{"v":2.25e-06,"d":"2.25E-06"},{"v":2.98e-05,"d":"2.98E-05"},"chaperone protein dnaJ-like protein."]
["AT2G42890","ML2",618.81,-0.86778,0.1466,-5.9196,{"v":3.23e-09,"d":"3.23E-09"},{"v":4.36E-8,"d":"4.36E-08"},"full_name=MEI2-like 2. MEI2-like 2. A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML2 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. AML2 is expressed during early embryo development (heart and torpedo stage) and predominantly in vegetative organs; no significant accumulation was detected in floral apices.","AT3G07270",null,224.23,1.1293,0.22081,5.1143,{"v":3.15E-7,"d":"3.15E-07"},{"v":4.24e-06,"d":"4.24E-06"},"GTP cyclohydrolase I.","AT4G35800","NRPB1",1176.4,0.74706,0.15797,4.7292,{"v":2.25e-06,"d":"2.25E-06"},{"v":2.98e-05,"d":"2.98E-05"},"full_name=RNA polymerase II large subunit. RNA polymerase II large subunit. Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit."]
["AT4G16760","ACX1",2421.2,0.74463,0.12593,5.9131,{"v":3.36E-9,"d":"3.36E-09"},{"v":4.52e-08,"d":"4.52E-08"},"full_name=acyl-CoA oxidase 1. acyl-CoA oxidase 1. Encodes a medium to long-chain acyl-CoA oxidase. Catalyzes the first step of fatty acid beta-oxidation. Involved in jasmonate biosynthesis. Gene expression is induced by wounding, drought stress, abscisic acid, and jasmonate.","AT1G70580","AOAT2",166.43,-1.4323,0.28103,-5.0967,{"v":3.46E-7,"d":"3.46E-07"},{"v":4.64e-06,"d":"4.64E-06"},"full_name=alanine-2-oxoglutarate aminotransferase 2. alanine-2-oxoglutarate aminotransferase 2. Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.","AT2G41700","ABCA1",305.32,0.96484,0.20438,4.7209,{"v":2.35e-06,"d":"2.35E-06"},{"v":3.09e-05,"d":"3.09E-05"},"full_name=ATP-binding cassette A1. ATP-binding cassette A1."]
["AT5G38830",null,836.63,-0.73902,0.12506,-5.9092,{"v":3.44e-09,"d":"3.44E-09"},{"v":4.62e-08,"d":"4.62E-08"},"Cysteinyl-tRNA synthetase, class Ia family protein.","AT3G56240","CCH",363.05,-1.1457,0.22521,-5.0872,{"v":3.63e-07,"d":"3.63E-07"},{"v":4.87E-6,"d":"4.87E-06"},"full_name=copper chaperone. copper chaperone. CCH protein belongs to a family of eukaryotic proteins that participate in intracellular copper homeostasis by delivering this metal to the secretory pathway; mainly located along the vascular bundles of senescing leaves and petioles as well as in stem sieve elements; hypothesized to have a role in copper mobilization from decaying organs towards reproductive structures, as a result of metalloprotein breakdown. The plant-specific C-terminal domain of the CCH protein forms amyloid-like fibrils in vitro.","AT2G06925","PLA2-ALPHA",99.468,-1.8749,0.39781,-4.7131,{"v":2.44e-06,"d":"2.44E-06"},{"v":3.2e-05,"d":"3.20E-05"},"Phospholipase A2 family protein. Encodes a secretory phospholipase A2 enzyme, which specifically hydrolyzes the sn-2 position of phospholipids. The enzyme has a preference towards linoleoyl acyl chain over palmitoyl acyl chain. It also has a slight preference for phosphatidylcholine over phosphatidylethanolamine."]
["AT5G66090",null,513.4,-0.89318,0.15131,-5.903,{"v":3.57e-09,"d":"3.57E-09"},{"v":4.79e-08,"d":"4.79E-08"},"cell wall integrity/stress response component.","AT5G25350","EBF2",1688.4,-0.97559,0.19183,-5.0859,{"v":3.66e-07,"d":"3.66E-07"},{"v":4.89e-06,"d":"4.89E-06"},"full_name=EIN3-binding F box protein 2. EIN3-binding F box protein 2. Arabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway.","AT2G01470","STL2P",715.74,0.72834,0.15458,4.7117,{"v":2.46e-06,"d":"2.46E-06"},{"v":3.22e-05,"d":"3.22E-05"},"full_name=SEC12P-like 2 protein. SEC12P-like 2 protein. Sec12p-like protein (GTP exchange protein) that functionally complements yeast sec12 null mutant. Protein is localized to the ER."]
["AT5G04750",null,1623.1,-0.68504,0.1161,-5.9004,{"v":3.63e-09,"d":"3.63E-09"},{"v":4.85e-08,"d":"4.85E-08"},"F1F0-ATPase inhibitor protein.","AT3G20250","PUM5",569.14,-0.80424,0.15834,-5.0793,{"v":3.79e-07,"d":"3.79E-07"},{"v":5.05e-06,"d":"5.05E-06"},"full_name=pumilio 5. pumilio 5. Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.","AT1G78370","GSTU20",507.88,-0.7992,0.16992,-4.7033,{"v":2.56e-06,"d":"2.56E-06"},{"v":3.34e-05,"d":"3.34E-05"},"full_name=glutathione S-transferase TAU 20. glutathione S-transferase TAU 20. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002)."]
["AT4G32940","GAMMA-VPE",1408.3,-0.79665,0.13525,-5.8902,{"v":3.86e-09,"d":"3.86E-09"},{"v":5.14e-08,"d":"5.14E-08"},"full_name=gamma vacuolar processing enzyme. gamma vacuolar processing enzyme. Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death.","AT4G27070","TSB2",355.88,-0.96929,0.19096,-5.0758,{"v":3.86e-07,"d":"3.86E-07"},{"v":5.13E-6,"d":"5.13E-06"},"full_name=tryptophan synthase beta-subunit 2. tryptophan synthase beta-subunit 2. Tryptophan synthase beta. Expressed at low levels in all tissues.","AT1G76020",null,89.971,1.6871,0.35936,4.6946,{"v":2.67e-06,"d":"2.67E-06"},{"v":3.48e-05,"d":"3.48E-05"},"Thioredoxin superfamily protein."]
["AT4G35190","LOG5",94.768,2.503,0.42538,5.8843,{"v":4e-09,"d":"4.00E-09"},{"v":5.32E-8,"d":"5.32E-08"},"full_name=LONELY GUY 5. Putative lysine decarboxylase family protein.","AT5G10510","AIL6",451,-0.92474,0.18267,-5.0623,{"v":4.14e-07,"d":"4.14E-07"},{"v":5.49E-6,"d":"5.49E-06"},"full_name=AINTEGUMENTA-like 6. AINTEGUMENTA-like 6. Encodes an AP2-domain transcription factor involved in root stem cell identity and root development. It is also required to maintain high levels of PIN1 expression at the periphery of the meristem and modulate local auxin production in the central region of the SAM which underlies phyllotactic transitions.","AT2G32120","HSP70T-2",61.657,2.1206,0.45211,4.6904,{"v":2.73e-06,"d":"2.73E-06"},{"v":3.54E-5,"d":"3.54E-05"},"full_name=heat-shock protein 70T-2. heat-shock protein 70T-2."]
["AT3G62700","ABCC14",3139.4,-0.50345,0.085572,-5.8833,{"v":4.02e-09,"d":"4.02E-09"},{"v":5.35e-08,"d":"5.35E-08"},"full_name=ATP-binding cassette C14. multidrug resistance-associated protein 10. member of MRP subfamily","AT5G12010",null,290.6,-0.97621,0.193,-5.058,{"v":4.24e-07,"d":"4.24E-07"},{"v":5.61e-06,"d":"5.61E-06"},"nuclease.","AT3G63320",null,17.477,7.5662,1.6133,4.6899,{"v":2.73e-06,"d":"2.73E-06"},{"v":3.55e-05,"d":"3.55E-05"},"Protein phosphatase 2C family protein."]
["AT3G48270","CYP71A26",1186.5,-0.73093,0.12435,-5.8781,{"v":4.15e-09,"d":"4.15E-09"},{"v":5.5e-08,"d":"5.50E-08"},"full_name=cytochrome P450, family 71, subfamily A, polypeptide 26. cytochrome P450, family 71, subfamily A, polypeptide 26. putative cytochrome P450","AT4G01150","CURT1A",2471.3,0.60342,0.11947,5.0508,{"v":4.4e-07,"d":"4.40E-07"},{"v":5.81e-06,"d":"5.81E-06"},"CURVATURE THYLAKOID 1A-like protein.","AT1G53320","TLP7",1030.2,0.67026,0.1431,4.6839,{"v":2.81e-06,"d":"2.81E-06"},{"v":3.64e-05,"d":"3.64E-05"},"full_name=tubby like protein 7. tubby like protein 7. Member of TLP family"]
["AT4G34190","2024-09-01",771.12,0.81346,0.13885,5.8584,{"v":4.67e-09,"d":"4.67E-09"},{"v":6.17e-08,"d":"6.17E-08"},"full_name=stress enhanced protein 1. stress enhanced protein 1. Encodes a stress enhanced protein that localizes to the thylakoid membrane and whose mRNA is upregulated in response to high light intensity. It may be involved in chlorophyll binding.","AT1G30120","PDH-E1 BETA",337.13,0.95181,0.18865,5.0455,{"v":4.52e-07,"d":"4.52E-07"},{"v":5.95e-06,"d":"5.95E-06"},"full_name=pyruvate dehydrogenase E1 beta. pyruvate dehydrogenase E1 beta. Encodes a putative plastid pyruvate dehydrogenase E1 beta subunit that is distinct from the mitochondrial pyruvate dehydrogenase E1 beta subunit.","AT5G62000","ARF2",1700.5,0.66009,0.14109,4.6785,{"v":2.89e-06,"d":"2.89E-06"},{"v":3.72e-05,"d":"3.72E-05"},"full_name=auxin response factor 2. auxin response factor 2. Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation."]
["AT5G59590","UGT76E2",1119.8,-0.82511,0.14089,-5.8565,{"v":4.73E-9,"d":"4.73E-09"},{"v":6.23e-08,"d":"6.23E-08"},"full_name=UDP-glucosyl transferase 76E2. UDP-glucosyl transferase 76E2.","AT4G24000","CSLG2",27.613,-7.8053,1.5478,-5.0428,{"v":4.59e-07,"d":"4.59E-07"},{"v":6.02E-6,"d":"6.02E-06"},"full_name=cellulose synthase like G2. cellulose synthase like G2. encodes a protein similar to cellulose synthase","AT1G07040",null,313.28,0.98279,0.21012,4.6773,{"v":2.91e-06,"d":"2.91E-06"},{"v":3.74e-05,"d":"3.74E-05"},"plant/protein."]
["AT5G04770","CAT6",67.358,-2.4405,0.41718,-5.8501,{"v":4.91e-09,"d":"4.91E-09"},{"v":6.46e-08,"d":"6.46E-08"},"full_name=cationic amino acid transporter 6. cationic amino acid transporter 6. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. Expressed in sink tissues. Induced during infestation of roots by the plant parasitic root-knot nematode, Meloidogyne incognita. Localized in the plasma membrane.","AT2G15960",null,494.51,-1.1289,0.22412,-5.0369,{"v":4.73e-07,"d":"4.73E-07"},{"v":6.2e-06,"d":"6.20E-06"},"stress-induced protein.","AT1G75710",null,190.95,-1.1362,0.24295,-4.6769,{"v":2.91e-06,"d":"2.91E-06"},{"v":3.74e-05,"d":"3.74E-05"},"C2H2-like zinc finger protein."]
["AT5G58930","OPL4",1352.1,-0.7287,0.12486,-5.8363,{"v":5.34e-09,"d":"5.34E-09"},{"v":7e-08,"d":"7.00E-08"},"hypothetical protein (DUF740).","AT4G09020","ISA3",4757.7,-0.55072,0.10942,-5.0331,{"v":4.83e-07,"d":"4.83E-07"},{"v":6.3e-06,"d":"6.30E-06"},"full_name=isoamylase 3. isoamylase 3. Encodes an isoamylase-like protein. Mutant studies show that the gene is strongly involved in starch breakdown. A GUS-protein fusion product was shown to localize to the surface of chloroplastic structures reminiscent of starch granules. In the mutants, the chloroplastic &#945;-amylase AMY3 is upregulated.","AT2G46680","HB-7",1513.6,2.1701,0.46503,4.6665,{"v":3.06e-06,"d":"3.06E-06"},{"v":3.92e-05,"d":"3.92E-05"},"full_name=homeobox 7. homeobox 7. encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response."]
["AT5G13710","SMT1",379.98,-1.2441,0.21339,-5.8302,{"v":5.53e-09,"d":"5.53E-09"},{"v":7.24E-8,"d":"7.24E-08"},"full_name=sterol methyltransferase 1. sterol methyltransferase 1. SMT1 controls the level of cholesterol in plants","AT5G10300","MES5",341.39,-1.1265,0.22441,-5.02,{"v":5.17e-07,"d":"5.17E-07"},{"v":6.73e-06,"d":"6.73E-06"},"full_name=methyl esterase 5. methyl esterase 5. Encodes a protein with R-selective hydroxynitrile lyase activity. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.","AT4G25240","SKS1",29.934,-3.0809,0.66187,-4.6548,{"v":3.24e-06,"d":"3.24E-06"},{"v":4.14e-05,"d":"4.14E-05"},"full_name=SKU5 similar 1. SKU5 similar 1. Encodes GPI-anchored SKU5-like protein."]
["AT4G01430","UMAMIT29",128.16,-1.7375,0.2986,-5.8187,{"v":5.93E-9,"d":"5.93E-09"},{"v":7.74e-08,"d":"7.74E-08"},"full_name=Usually multiple acids move in and out Transporters 29. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT3G26450",null,65.2,2.3789,0.47434,5.0151,{"v":5.3e-07,"d":"5.30E-07"},{"v":6.89e-06,"d":"6.89E-06"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein.","AT5G01720","RAE1",148.77,1.2773,0.27478,4.6486,{"v":3.34e-06,"d":"3.34E-06"},{"v":4.26e-05,"d":"4.26E-05"},"RNI-like superfamily protein."]
["AT5G08280","HEMC",2569.6,0.66428,0.11417,5.8185,{"v":5.94e-09,"d":"5.94E-09"},{"v":7.74e-08,"d":"7.74E-08"},"full_name=hydroxymethylbilane synthase. hydroxymethylbilane synthase. Encodes a protein with porphobilinogen deaminase activity. This protein is targeted to the chloroplast. Mutants spontaneously develop chlorotic leaf lesions in the absence of pathogen attack, resembling the phenotype of lesion-mimic mutants.","AT1G02450","NIMIN1",25.405,3.5293,0.70402,5.0131,{"v":5.36e-07,"d":"5.36E-07"},{"v":6.96e-06,"d":"6.96E-06"},"full_name=NIM1-interacting 1. NIM1-interacting 1. NIMIN1 modulates PR gene expression according the following model: NPR1 forms a ternary complex with NIMIN1 and TGA factors upon SAR induction that binds to a positive regulatory cis-element of the PR-1 promoter, termed LS7. This leads to PR-1 gene induction. NIMIN1 decreases transcriptional activation, possibly through its EAR motif, which results in fine-tuning of PR-1 gene expression.","AT1G53670","MSRB1",280.31,1.044,0.22461,4.6479,{"v":3.35e-06,"d":"3.35E-06"},{"v":4.27e-05,"d":"4.27E-05"},"full_name=methionine sulfoxide reductase B 1. methionine sulfoxide reductase B 1."]
["AT5G16810",null,562.05,-0.88369,0.15209,-5.8105,{"v":6.23e-09,"d":"6.23E-09"},{"v":8.1e-08,"d":"8.10E-08"},"Protein kinase superfamily protein.","AT1G06850","bZIP52",74.687,1.7571,0.35099,5.0061,{"v":5.55e-07,"d":"5.55E-07"},{"v":7.19e-06,"d":"7.19E-06"},"full_name=basic leucine-zipper 52. basic leucine-zipper 52.","AT1G18090",null,87.638,-1.6957,0.3657,-4.6369,{"v":3.54E-6,"d":"3.54E-06"},{"v":4.49E-5,"d":"4.49E-05"},"5'-3' exonuclease family protein."]
["AT3G47470","LHCA4",3047.6,-0.66208,0.11399,-5.808,{"v":6.32e-09,"d":"6.32E-09"},{"v":8.2e-08,"d":"8.20E-08"},"full_name=light-harvesting chlorophyll-protein complex I subunit A4. light-harvesting chlorophyll-protein complex I subunit A4. Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins.","AT1G68890","PHYLLO",433.53,0.92135,0.18431,4.9988,{"v":5.77e-07,"d":"5.77E-07"},{"v":7.45e-06,"d":"7.45E-06"},"full_name=PHYLLO. 2-oxoglutarate decarboxylase/hydro-lyase/magnesium ion-binding protein. Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis.","AT3G12610","DRT100",350.47,-0.89983,0.19412,-4.6354,{"v":3.56e-06,"d":"3.56E-06"},{"v":4.51e-05,"d":"4.51E-05"},"full_name=DNA-DAMAGE REPAIR/TOLERATION 100. Leucine-rich repeat (LRR) family protein. Plays role in DNA-damage repair/toleration. Partially complements RecA- phenotypes."]
["AT5G18500",null,434.35,-1.0145,0.17493,-5.7994,{"v":6.65E-9,"d":"6.65E-09"},{"v":8.6e-08,"d":"8.60E-08"},"Protein kinase superfamily protein.","AT1G78420","LARGE IN CHINESE",539.8,-0.76854,0.15403,-4.9897,{"v":6.05e-07,"d":"6.05E-07"},{"v":7.78e-06,"d":"7.78E-06"},"RING/U-box superfamily protein.","AT5G09510",null,1547.2,-0.6837,0.14787,-4.6236,{"v":3.77e-06,"d":"3.77E-06"},{"v":4.76e-05,"d":"4.76E-05"},"Ribosomal protein S19 family protein."]
["AT4G27260","WES1",1375.9,0.60422,0.10426,5.7955,{"v":6.81e-09,"d":"6.81E-09"},{"v":8.79E-8,"d":"8.79E-08"},"Auxin-responsive GH3 family protein. encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin. It is involved in camalexin biosynthesis via conjugating indole-3-carboxylic acid (ICA) and cysteine (Cys).","AT4G22214",null,143.24,2.1203,0.42518,4.9867,{"v":6.14e-07,"d":"6.14E-07"},{"v":7.89e-06,"d":"7.89E-06"},"Defensin-like (DEFL) family protein. Encodes a defensin-like (DEFL) family protein.","AT2G34310",null,494.19,0.96953,0.20975,4.6223,{"v":3.79e-06,"d":"3.79E-06"},{"v":4.78e-05,"d":"4.78E-05"},"hypothetical protein."]
["AT2G04050",null,37.737,4.825,0.83318,5.791,{"v":7e-09,"d":"7.00E-09"},{"v":9.01e-08,"d":"9.01E-08"},"MATE efflux family protein.","AT1G22160",null,236.52,1.1087,0.22249,4.983,{"v":6.26e-07,"d":"6.26E-07"},{"v":8.03e-06,"d":"8.03E-06"},"senescence-associated family protein (DUF581).","AT5G46760","MYC3",458.33,0.98522,0.21324,4.6203,{"v":3.83e-06,"d":"3.83E-06"},{"v":4.82e-05,"d":"4.82E-05"},"Basic helix-loop-helix (bHLH) DNA-binding family protein. MYC3 is a JAZ-interacting transcription factor that act together with MYC2 and MYC4 to activate JA-responses."]
["AT1G11360",null,494.23,-0.88973,0.15387,-5.7825,{"v":7.36e-09,"d":"7.36E-09"},{"v":9.44e-08,"d":"9.44E-08"},"Adenine nucleotide alpha hydrolases-like superfamily protein.","AT3G28380","ABCB17",17.941,8.0487,1.6165,4.9791,{"v":6.39e-07,"d":"6.39E-07"},{"v":8.16e-06,"d":"8.16E-06"},"full_name=ATP-binding cassette B17. P-glycoprotein 17.","AT2G16850","PIP2;8",122.84,-1.4365,0.31113,-4.617,{"v":3.89E-6,"d":"3.89E-06"},{"v":4.88E-5,"d":"4.88E-05"},"full_name=plasma membrane intrinsic protein 2;8. plasma membrane intrinsic protein 2;8."]
["AT1G53840","PME1",803.77,-0.97436,0.16867,-5.7768,{"v":7.61E-9,"d":"7.61E-09"},{"v":9.74e-08,"d":"9.74E-08"},"full_name=pectin methylesterase 1. pectin methylesterase 1. encodes a pectin methylesterase","AT2G34790","MEE23",57.221,-2.1848,0.4397,-4.9688,{"v":6.74e-07,"d":"6.74E-07"},{"v":8.59e-06,"d":"8.59E-06"},"full_name=MATERNAL EFFECT EMBRYO ARREST 23. FAD-binding Berberine family protein.","AT4G15210","BAM5",189.3,-1.6467,0.35709,-4.6115,{"v":4e-06,"d":"4.00E-06"},{"v":4.99E-5,"d":"4.99E-05"},"full_name=beta-amylase 5. beta-amylase 5. cytosolic beta-amylase expressed in rosette leaves and inducible by sugar. RAM1 mutants have reduced beta amylase in leaves and stems."]
["AT1G07380","ATNCER1",486.93,-0.8843,0.1531,-5.7759,{"v":7.65e-09,"d":"7.65E-09"},{"v":9.79e-08,"d":"9.79E-08"},"Neutral/alkaline non-lysosomal ceramidase.","AT5G14040","PHT3;1",3514.9,0.57487,0.1157,4.9685,{"v":6.75E-7,"d":"6.75E-07"},{"v":8.6e-06,"d":"8.60E-06"},"full_name=phosphate transporter 3;1. phosphate transporter 3;1. Encodes a mitochondrial phosphate transporter. Modulates plant responses to salt stress.","AT5G16900",null,27.132,3.4326,0.7445,4.6106,{"v":4.01e-06,"d":"4.01E-06"},{"v":5.01e-05,"d":"5.01E-05"},"Leucine-rich repeat protein kinase family protein."]
["AT1G68490",null,490.94,0.95725,0.16611,5.7628,{"v":8.27e-09,"d":"8.27E-09"},{"v":1.06E-7,"d":"1.06E-07"},"translocase subunit seca.","AT5G27760","ATHIGD2",386.35,-1.0038,0.20239,-4.9596,{"v":7.06E-7,"d":"7.06E-07"},{"v":8.97e-06,"d":"8.97E-06"},"Hypoxia-responsive family protein.","AT5G38410","RBCS3B",5035.2,-0.80143,0.17412,-4.6029,{"v":4.17e-06,"d":"4.17E-06"},{"v":5.19e-05,"d":"5.19E-05"},"full_name=Rubisco small subunit 3B. Ribulose bisphosphate carboxylase (small chain) family protein. Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410). Functions to yield sufficient Rubisco content for leaf photosynthetic capacity."]
["AT5G56369",null,39.891,-8.8121,1.5299,-5.7597,{"v":8.43E-9,"d":"8.43E-09"},{"v":1.07e-07,"d":"1.07E-07"},"Defensin-like (DEFL) family protein. Encodes a defensin-like (DEFL) family protein.","AT2G43060","IBH1",29.282,-4.0526,0.8186,-4.9507,{"v":7.39e-07,"d":"7.39E-07"},{"v":9.38E-6,"d":"9.38E-06"},"full_name=ILI1 binding bHLH 1. ILI1 binding bHLH 1.","AT3G46450",null,397.11,0.99517,0.21648,4.597,{"v":4.29e-06,"d":"4.29E-06"},{"v":5.33e-05,"d":"5.33E-05"},"SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein."]
["AT5G55490","GEX1",85.393,-2.0048,0.34894,-5.7455,{"v":9.17e-09,"d":"9.17E-09"},{"v":1.16e-07,"d":"1.16E-07"},"full_name=gamete expressed protein 1. gamete expressed protein 1. Encodes a transmembrane domain containing protein that is expressed in pollen germ cells.","AT4G23800","3xHMG-box2",114.19,1.6763,0.33911,4.9431,{"v":7.69e-07,"d":"7.69E-07"},{"v":9.71e-06,"d":"9.71E-06"},"full_name=3xHigh Mobility Group-box2. HMG (high mobility group) box protein. Encodes a protein containing three copies of the HMG (high mobility group)-box domain. The two Arabidopsis 3xHMG-box proteins are: AT4G11080 (3xHMG-box1) and AT4G23800 (3xHMG-box2). Interacts with mitotic and meiotic chromosomes.","AT5G66940","ATDOF5.8",30.534,3.0411,0.66278,4.5885,{"v":4.47e-06,"d":"4.47E-06"},{"v":5.53e-05,"d":"5.53E-05"},"Dof-type zinc finger DNA-binding family protein."]
["AT4G36930","SPT",353.65,-0.98858,0.17212,-5.7436,{"v":9.27e-09,"d":"9.27E-09"},{"v":1.17E-7,"d":"1.17E-07"},"full_name=SPATULA. basic helix-loop-helix (bHLH) DNA-binding superfamily protein. Encodes a transcription factor of the bHLH protein family. Mutants have abnormal, unfused carpels and reduced seed dormancy.","AT1G02340","HFR1",37.922,2.5814,0.52271,4.9386,{"v":7.87e-07,"d":"7.87E-07"},{"v":9.92e-06,"d":"9.92E-06"},"full_name=LONG HYPOCOTYL IN FAR-RED. basic helix-loop-helix (bHLH) DNA-binding superfamily protein. Encodes a light-inducible, nuclear bHLH protein involved in phytochrome signaling. Mutants exhibit a long-hypocotyl phenotype only under far-red light but not under red light and are defective in other phytochrome A-related responses. Mutants also show blue light response defects. HFR1 interacts with COP1, co-localizes to the nuclear specks and is ubiquinated by COP1.","AT1G28200","FIP1",276.06,1.0968,0.23907,4.5877,{"v":4.48e-06,"d":"4.48E-06"},{"v":5.54e-05,"d":"5.54E-05"},"full_name=FH interacting protein 1. FH interacting protein 1. VirF-interacting protein FIP1"]
["AT5G18650","MIEL1",579.69,0.90657,0.15797,5.7387,{"v":9.54e-09,"d":"9.54E-09"},{"v":1.21e-07,"d":"1.21E-07"},"CHY-type/CTCHY-type/RING-type Zinc finger protein. Encodes a RING-type E3 ubiquitin ligase that interacts with and ubiquitinates MYB30, leads to MYB30 proteasomal degradation and downregulation of its transcriptional activity. Since MYB30 is a positive regulator of Arabidopsis HR and defence responses, MIEL1 is involved in the negative regulation of these processes.","AT5G27660","DEG14",475.57,-0.78201,0.15864,-4.9293,{"v":8.25e-07,"d":"8.25E-07"},{"v":1.04E-5,"d":"1.04E-05"},"full_name=degradation of periplasmic proteins 14. Trypsin family protein with PDZ domain-containing protein. Encodes a protein with similarity to human PARK13, a mitochondrial protease implicated in Parkinson disease. DEG14 is induced by heat stress and involved in degradation of misfolded proteins.","AT4G20880",null,200.72,1.2468,0.27186,4.5861,{"v":4.52e-06,"d":"4.52E-06"},{"v":5.57e-05,"d":"5.57E-05"},"ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2)."]
["AT5G56680","SYNC1",1110.6,0.66104,0.11536,5.7304,{"v":1E-8,"d":"1.00E-08"},{"v":1.26e-07,"d":"1.26E-07"},"Class II aminoacyl-tRNA and biotin synthetases superfamily protein. Encodes a putative cytosolic asparaginyl-tRNA synthetase.","AT3G48670","IDN2",1124.5,-0.63887,0.12971,-4.9255,{"v":8.41e-07,"d":"8.41E-07"},{"v":1.06E-5,"d":"1.06E-05"},"full_name=INVOLVED IN DE NOVO 2. XH/XS domain-containing protein. Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.","AT5G23380",null,292.58,0.96019,0.20954,4.5823,{"v":4.6E-6,"d":"4.60E-06"},{"v":5.65e-05,"d":"5.65E-05"},"hypothetical protein (DUF789)."]
["AT4G00020","BRCA2(IV)",114.1,1.7566,0.3069,5.7238,{"v":1.04E-8,"d":"1.04E-08"},{"v":1.31E-7,"d":"1.31E-07"},"full_name=BREAST CANCER 2 like 2A. BREAST CANCER 2 like 2A. Ortholog of breast cancer susceptibility protein 2. Essential at meiosis. Interacts with either AtRad51 or AtDmc1 and ATDSS1(I). Involved in embryo sac development and defense gene transcription during plant immune responses.","AT1G21000","PLATZ1",1011,-0.71151,0.14453,-4.923,{"v":8.52e-07,"d":"8.52E-07"},{"v":1.07e-05,"d":"1.07E-05"},"PLATZ transcription factor family protein.","AT4G00180","YAB3",278.89,-1.0116,0.22104,-4.5766,{"v":4.73e-06,"d":"4.73E-06"},{"v":5.79e-05,"d":"5.79E-05"},"full_name=YABBY3. Plant-specific transcription factor YABBY family protein. YABBY gene family member, likely has transcription factor activity, involved in specifying abaxial cell fate. Along with FIL, involved in patterning of the fruit. GUS reporter gene expression in seedlings is observed in the young leaves and as the leaf matures, expression is restricted to the abaxial tissues of leaves, expression is also observed on either side of the leaf margin in the younger tissues of leaf blades."]
["AT2G47130","SDR3",185.67,1.3386,0.23387,5.7235,{"v":1.04E-8,"d":"1.04E-08"},{"v":1.31E-7,"d":"1.31E-07"},"full_name=short-chain dehydrogenase/reductase 2. NAD(P)-binding Rossmann-fold superfamily protein. Encodes a short-chain dehydrogenase/reductase that is not involved in ABA biosynthesis but plays an important role in plant defense response to bacteria.","AT4G10690",null,806.45,-0.66834,0.13576,-4.9228,{"v":8.53e-07,"d":"8.53E-07"},{"v":1.07e-05,"d":"1.07E-05"},"transposable_element_gene.","AT3G17205","UPL6",443.5,0.83117,0.18168,4.5749,{"v":4.76e-06,"d":"4.76E-06"},{"v":5.84e-05,"d":"5.84E-05"},"full_name=ubiquitin protein ligase 6. ubiquitin protein ligase 6."]
["AT3G08943",null,552.6,0.82712,0.14469,5.7166,{"v":1.09E-8,"d":"1.09E-08"},{"v":1.36E-7,"d":"1.36E-07"},"ARM repeat superfamily protein.","AT4G34580","COW1",16.822,7.9537,1.6163,4.9209,{"v":8.61e-07,"d":"8.61E-07"},{"v":1.07e-05,"d":"1.07E-05"},"full_name=CAN OF WORMS1. Sec14p-like phosphatidylinositol transfer family protein. Encodes COW1 (can of worms1), a phosphatidylinositol transfer protein essential for root hair tip growth. The N-terminus of the COW1 protein is 32% identical to an essential phosphatidylinositol transfer protein (PITP), the yeast Sec14 protein (sec14p) while the C-terminus is 34.5% identical to a late nodulin of Lotus japonicus, Nlj16. Expression of COW1 complements the growth defect associated with Sec14p dysfunction in yeast. GFP fused to the COW1 protein specifically accumulates at the site of root hair outgrowth.","AT2G31380","STH",39.927,2.5026,0.5475,4.571,{"v":4.86e-06,"d":"4.86E-06"},{"v":5.93e-05,"d":"5.93E-05"},"full_name=salt tolerance homologue. salt tolerance homologue. a B-box zinc finger protein that interacts with COP1. contains a novel 11 amino acid motif at the C-terminus (also found at the N-terminus of HY5) that is involved in the COP1 interaction."]
["AT1G28330","DYL1",3979.4,0.54404,0.095307,5.7082,{"v":1.14E-8,"d":"1.14E-08"},{"v":1.43E-7,"d":"1.43E-07"},"full_name=dormancy-associated protein-like 1. dormancy-associated protein-like 1. dormancy-associated protein (DRM1)","AT2G34870","MEE26",55.229,-2.3929,0.48693,-4.9142,{"v":8.91e-07,"d":"8.91E-07"},{"v":1.11E-5,"d":"1.11E-05"},"full_name=maternal effect embryo arrest 26. hydroxyproline-rich glycoprotein family protein.","AT3G07870","FBX92",98.61,1.731,0.37895,4.568,{"v":4.93e-06,"d":"4.93E-06"},{"v":6.01e-05,"d":"6.01E-05"},"F-box and associated interaction domains-containing protein."]
["AT1G24360","KR",1456.3,-0.72513,0.12718,-5.7014,{"v":1.19e-08,"d":"1.19E-08"},{"v":1.48E-7,"d":"1.48E-07"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT3G14540","TPS19",24.259,3.8139,0.77729,4.9066,{"v":9.27e-07,"d":"9.27E-07"},{"v":1.15E-5,"d":"1.15E-05"},"Terpenoid cyclases/Protein prenyltransferases superfamily protein.","AT4G17170","RABB1C",336.29,0.88782,0.19483,4.5569,{"v":5.19e-06,"d":"5.19E-06"},{"v":6.31e-05,"d":"6.31E-05"},"full_name=RAB GTPase homolog B1C. RAB GTPase homolog B1C. member of RAB gene family"]
["AT1G62990","KNAT7",153.37,-1.5119,0.26553,-5.6941,{"v":1.24E-8,"d":"1.24E-08"},{"v":1.54E-7,"d":"1.54E-07"},"full_name=KNOTTED-like homeobox of Arabidopsis thaliana 7. homeobox knotted-like protein. Encodes a homeodomain transcription factor of the Knotted family. May be involved in secondary cell wall biosynthesis. Mutants have moderately irregular xylem development. Expression of this gene is upregulated by SND1 and MYB46.","AT4G12650","TMN12",1743.8,0.53083,0.10823,4.9049,{"v":9.35e-07,"d":"9.35E-07"},{"v":1.16e-05,"d":"1.16E-05"},"Endomembrane protein 70 protein family.","AT5G39590","OXR5",578.08,0.83614,0.18351,4.5564,{"v":5.2e-06,"d":"5.20E-06"},{"v":6.32e-05,"d":"6.32E-05"},"TLD-domain containing nucleolar protein."]
["AT3G15350",null,162.32,1.5167,0.26664,5.6884,{"v":1.28E-8,"d":"1.28E-08"},{"v":1.59e-07,"d":"1.59E-07"},"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein.","AT4G37030",null,37.99,-2.9795,0.6087,-4.8948,{"v":9.84e-07,"d":"9.84E-07"},{"v":1.22E-5,"d":"1.22E-05"},"membrane protein.","AT3G54390",null,114.77,1.4099,0.30992,4.5492,{"v":5.39e-06,"d":"5.39E-06"},{"v":6.52e-05,"d":"6.52E-05"},"sequence-specific DNA binding transcription factor."]
["AT5G23900",null,2389.6,0.54617,0.096069,5.6852,{"v":1.31E-8,"d":"1.31E-08"},{"v":1.62e-07,"d":"1.62E-07"},"Ribosomal protein L13e family protein.","AT5G64330","NPH3",377.26,0.94278,0.19272,4.892,{"v":9.98e-07,"d":"9.98E-07"},{"v":1.23e-05,"d":"1.23E-05"},"full_name=NON-PHOTOTROPIC HYPOCOTYL 3. Phototropic-responsive NPH3 family protein. Involved in blue light response signaling pathway; interacts with the blue light photoreceptor NPH1. Null mutations abolish phototrophic responses of etiolated seedlings to low fluence blue light. Protein contains multiple protein-protein interaction domains.","AT1G78080","RAP2.4",596.23,-0.76544,0.16838,-4.546,{"v":5.47e-06,"d":"5.47E-06"},{"v":6.6e-05,"d":"6.60E-05"},"full_name=related to AP2 4. related to AP2 4. Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. Role in mediating light and ethylene signaling."]
["AT5G11160","APT5",164.84,-1.4129,0.24891,-5.6762,{"v":1.38e-08,"d":"1.38E-08"},{"v":1.7e-07,"d":"1.70E-07"},"full_name=adenine phosphoribosyltransferase 5. adenine phosphoribosyltransferase 5.","AT5G14200","IMD1",24.356,-7.6242,1.5608,-4.8847,{"v":1.04E-6,"d":"1.04E-06"},{"v":1.27E-5,"d":"1.27E-05"},"full_name=isopropylmalate dehydrogenase 1. isopropylmalate dehydrogenase 1. The AtIMD1 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids. Encodes methylthioalkylmalate dehydrogenase. Involved in glucosinolate biosynthesis, in methionine chain elongation.","AT3G16370",null,250.09,-1.1039,0.24311,-4.5408,{"v":5.61e-06,"d":"5.61E-06"},{"v":6.75e-05,"d":"6.75E-05"},"GDSL-like Lipase/Acylhydrolase superfamily protein."]
["AT2G40150","TBL28",59.879,-2.7558,0.48558,-5.6753,{"v":1.38e-08,"d":"1.38E-08"},{"v":1.71e-07,"d":"1.71E-07"},"full_name=TRICHOME BIREFRINGENCE-LIKE 28. TRICHOME BIREFRINGENCE-LIKE 28. Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT4G26420","GAMT1",30.123,-4.4703,0.91527,-4.8841,{"v":1.04E-6,"d":"1.04E-06"},{"v":1.28e-05,"d":"1.28E-05"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. A member of the Arabidopsis SABATH methyltransferase gene family. Encodes GAMT1, a methyltransferase that uses S-adenosine-L-methionine (SAM) as a methyl donor to methylate the carboxyl group of GAs, resulting in the methyl esters of GAs (MeGAs). Expressed most highly in the siliques during seed development.","AT1G21120","IGMT2",15.526,7.3925,1.6289,4.5383,{"v":5.67e-06,"d":"5.67E-06"},{"v":6.83e-05,"d":"6.83E-05"},"full_name=indole glucosinolate O-methyltransferase 2. O-methyltransferase family protein."]
["AT1G21900","p24delta5",479.95,-0.88674,0.15635,-5.6715,{"v":1.42E-8,"d":"1.42E-08"},{"v":1.74E-7,"d":"1.74E-07"},"full_name=p24 subfamily delta 5. emp24/gp25L/p24 family/GOLD family protein. Encodes an ER-localized p24 protein. Interacts with p24beta2 at ER export sites for ER exit and coupled transport to the Golgi apparatus. Once in the Golgi, p24delta5 interacts very efficiently with the COPI machinery for retrograde transport back to the ER.","AT3G28007","SWEET4",45.981,-2.879,0.59017,-4.8782,{"v":1.07e-06,"d":"1.07E-06"},{"v":1.31E-5,"d":"1.31E-05"},"Nodulin MtN3 family protein.","AT3G59580","NLP9",83.093,1.7622,0.38866,4.534,{"v":5.79e-06,"d":"5.79E-06"},{"v":6.95e-05,"d":"6.95E-05"},"Plant regulator RWP-RK family protein."]
["AT4G26540","RGFR3",144.01,1.4986,0.26458,5.6641,{"v":1.48E-8,"d":"1.48E-08"},{"v":1.81e-07,"d":"1.81E-07"},"Leucine-rich repeat receptor-like protein kinase family protein.","AT3G17780",null,264.75,0.94779,0.19467,4.8687,{"v":1.12e-06,"d":"1.12E-06"},{"v":1.37e-05,"d":"1.37E-05"},"B-cell receptor-associated-like protein.","AT3G57880","MCTP3",298.7,0.94332,0.20821,4.5307,{"v":5.88e-06,"d":"5.88E-06"},{"v":7.03e-05,"d":"7.03E-05"},"Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein."]
["AT4G21326","SBT3.12",212.08,-1.252,0.22117,-5.6605,{"v":1.51E-8,"d":"1.51E-08"},{"v":1.85E-7,"d":"1.85E-07"},"full_name=subtilase 3.12. subtilase 3.12.","AT4G29040","RPT2a",1842.6,-0.55287,0.11376,-4.86,{"v":1.17E-6,"d":"1.17E-06"},{"v":1.43E-5,"d":"1.43E-05"},"full_name=regulatory particle AAA-ATPase 2A. regulatory particle AAA-ATPase 2A. RPT2a encodes the 26S proteasome subunit. It is required for root meristem maintenance, and regulates gametogenesis. RPT2a is also shown to regulate gene silencing via DNA methylation.","AT4G30610","BRS1",40.198,-2.4341,0.53773,-4.5267,{"v":5.99e-06,"d":"5.99E-06"},{"v":7.16e-05,"d":"7.16E-05"},"full_name=BRI1 SUPPRESSOR 1. alpha/beta-Hydrolases superfamily protein. Encodes a secreted glycosylated serine carboxypeptidase with broad substrate preference that is involved in brassinosteroid signalling via BRI1. It is proteolytically processed in vivo by a separate as yet unidentified protease."]
["AT2G45820","Rem1.3",1699,-0.5865,0.10366,-5.658,{"v":1.53e-08,"d":"1.53E-08"},{"v":1.87e-07,"d":"1.87E-07"},"Remorin family protein.","AT1G08810","MYB60",30.507,-3.5757,0.736,-4.8583,{"v":1.18e-06,"d":"1.18E-06"},{"v":1.44e-05,"d":"1.44E-05"},"full_name=myb domain protein 60. myb domain protein 60. putative transcription factor of the R2R3-MYB gene family. Transcript increases under conditions that promote stomatal opening (white and blue light, abi1-1 mutation) and decreases under conditions that trigger stomatal closure (ABA, desiccation, darkness), with the exception of elevated CO2. Expressed exclusively in guard cells of all tissues. It is required for light-induced opening of stomata. Mutant shows reduced stomatal aperture which helps to limit water loss during drought.","AT1G07310",null,224.07,1.0295,0.22765,4.522,{"v":6.13e-06,"d":"6.13E-06"},{"v":7.31e-05,"d":"7.31E-05"},"Calcium-dependent lipid-binding (CaLB domain) family protein."]
["AT1G18800","NRP2",1476.4,0.59466,0.10531,5.6466,{"v":1.64e-08,"d":"1.64E-08"},{"v":1.99E-7,"d":"1.99E-07"},"full_name=NAP1-related protein 2. NAP1-related protein 2. Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo.","AT2G34620","MTERF10",37.278,2.5677,0.52966,4.8479,{"v":1.25e-06,"d":"1.25E-06"},{"v":1.51e-05,"d":"1.51E-05"},"Mitochondrial transcription termination factor family protein.","AT4G12420","SKU5",334.05,-0.9719,0.21524,-4.5155,{"v":6.32e-06,"d":"6.32E-06"},{"v":7.51e-05,"d":"7.51E-05"},"Cupredoxin superfamily protein. Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues."]
["AT1G19150","Lhca6",48.853,2.8587,0.50641,5.645,{"v":1.65e-08,"d":"1.65E-08"},{"v":2.01e-07,"d":"2.01E-07"},"full_name=photosystem I light harvesting complex gene 6. PSI type II chlorophyll a/b-binding protein (Lhca2*1). PSI type II chlorophyll a/b-binding protein (Lhca2*1) mRNA,","AT1G33590",null,166.69,1.244,0.25682,4.844,{"v":1.27e-06,"d":"1.27E-06"},{"v":1.54e-05,"d":"1.54E-05"},"Leucine-rich repeat (LRR) family protein.","AT2G21820",null,1174.8,3.4806,0.7712,4.5132,{"v":6.39e-06,"d":"6.39E-06"},{"v":7.57e-05,"d":"7.57E-05"},"seed maturation protein."]
["AT2G15480","UGT73B5",247.92,1.3113,0.23244,5.6412,{"v":1.69e-08,"d":"1.69E-08"},{"v":2.05E-7,"d":"2.05E-07"},"full_name=UDP-glucosyl transferase 73B5. UDP-glucosyl transferase 73B5.","AT1G21770",null,356.96,-1.0236,0.21142,-4.8415,{"v":1.29e-06,"d":"1.29E-06"},{"v":1.55e-05,"d":"1.55E-05"},"Acyl-CoA N-acyltransferases (NAT) superfamily protein.","AT2G20815","QWRF3",49.937,2.1986,0.48745,4.5105,{"v":6.47e-06,"d":"6.47E-06"},{"v":7.65e-05,"d":"7.65E-05"},"full_name=QWRF domain containing 3. QWRF motif protein (DUF566)."]
["AT5G49190","SUS2",541.26,-2.9886,0.52988,-5.6402,{"v":1.7E-8,"d":"1.70E-08"},{"v":2.06e-07,"d":"2.06E-07"},"full_name=sucrose synthase 2. sucrose synthase 2. Encodes a sucrose synthase (SUS2). The activity of the enzyme could not be assayed as proved to be insoluble (PMID 17257168). However, analyses of an sus2 mutant revealed a deficiency in sucrose synthase activity 12 and 15 days after flowering. There are some reports that SUS2 transcript levels are increased in leaves specifically by O(2) deficiency whereas other reports indicate that SUS2 is expressed only in seeds. Immulocalization shows that SUS2 is present in the cytosol of developing seeds, but, it also associated with plastids, though not located within them.","AT1G50900","GDC1",456.83,0.9147,0.18893,4.8415,{"v":1.29e-06,"d":"1.29E-06"},{"v":1.55e-05,"d":"1.55E-05"},"full_name=Grana Deficient Chloroplast 1. Ankyrin repeat family protein. Encodes GDC1 (Grana Deficient Chloroplast 1), an ankyrin domain containing protein required fro chloroplast thylakoid grana formation.","AT5G43930","RTP5",353.4,0.89206,0.19781,4.5096,{"v":6.49e-06,"d":"6.49E-06"},{"v":7.68e-05,"d":"7.68E-05"},"Transducin family protein / WD-40 repeat family protein."]
["AT4G17560",null,1348.9,0.69751,0.12374,5.6371,{"v":1.73e-08,"d":"1.73E-08"},{"v":2.09e-07,"d":"2.09E-07"},"Ribosomal protein L19 family protein.","AT2G39080","EMB2799",344.99,0.9462,0.1957,4.835,{"v":1.33E-6,"d":"1.33E-06"},{"v":1.6e-05,"d":"1.60E-05"},"full_name=EMBRYO DEFECTIVE 2799. NAD(P)-binding Rossmann-fold superfamily protein.","AT5G66770",null,88.499,-1.5646,0.34724,-4.5059,{"v":6.61e-06,"d":"6.61E-06"},{"v":7.79e-05,"d":"7.79E-05"},"GRAS family transcription factor."]
["AT5G59220","HAI1",336.36,-1.1545,0.20512,-5.6284,{"v":1.82e-08,"d":"1.82E-08"},{"v":2.19e-07,"d":"2.19E-07"},"full_name=highly ABA-induced PP2C gene 1. PP2C protein (Clade A protein phosphatases type 2C). Encodes a member of the PP2C family (Clade A protein phosphatases type 2C). Functions as a negative regulator of osmotic stress and ABA signaling.","AT1G30135","JAZ8",23.287,-7.5594,1.5654,-4.8291,{"v":1.37E-6,"d":"1.37E-06"},{"v":1.65e-05,"d":"1.65E-05"},"full_name=jasmonate-zim-domain protein 8. jasmonate-zim-domain protein 8.","AT5G13510","EMB3136",872.06,-0.66739,0.14822,-4.5026,{"v":6.71e-06,"d":"6.71E-06"},{"v":7.89e-05,"d":"7.89E-05"},"full_name=EMBRYO DEFECTIVE 3136. Ribosomal protein L10 family protein."]
["AT1G17820",null,80.812,7.2803,1.2944,5.6246,{"v":1.86e-08,"d":"1.86E-08"},{"v":2.23E-7,"d":"2.23E-07"},"testis-expressed sequence 2-like protein (DUF2404).","AT4G21870",null,24.306,3.6102,0.749,4.82,{"v":1.44E-6,"d":"1.44E-06"},{"v":1.72e-05,"d":"1.72E-05"},"HSP20-like chaperones superfamily protein.","AT1G64680",null,457.82,0.91817,0.20394,4.5023,{"v":6.72E-6,"d":"6.72E-06"},{"v":7.89e-05,"d":"7.89E-05"},"beta-carotene isomerase D27."]
["AT5G65750",null,4494.6,-0.50353,0.089555,-5.6226,{"v":1.88E-8,"d":"1.88E-08"},{"v":2.26e-07,"d":"2.26E-07"},"2-oxoglutarate dehydrogenase, E1 component.","AT5G11450","PPD5",841.39,0.63695,0.1324,4.811,{"v":1.5E-6,"d":"1.50E-06"},{"v":1.79e-05,"d":"1.79E-05"},"full_name=PsbP domain protein 5. PsbP domain protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein).","AT1G53680","GSTU28",44.519,2.2558,0.50158,4.4974,{"v":6.88e-06,"d":"6.88E-06"},{"v":8.06e-05,"d":"8.06E-05"},"full_name=glutathione S-transferase TAU 28. glutathione S-transferase TAU 28. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002)."]
["AT5G40770","PHB3",1876.1,0.54866,0.097658,5.6182,{"v":1.93e-08,"d":"1.93E-08"},{"v":2.31e-07,"d":"2.31E-07"},"full_name=prohibitin 3. prohibitin 3. prohibitin 3","AT1G77710","CCP2",1010.7,-0.6575,0.1368,-4.8064,{"v":1.54e-06,"d":"1.54E-06"},{"v":1.83e-05,"d":"1.83E-05"},"full_name=conserved in ciliated species and in the land plants 2. ubiquitin-fold modifier.","AT5G02610",null,901.17,-0.71769,0.15967,-4.4949,{"v":6.96e-06,"d":"6.96E-06"},{"v":8.14E-5,"d":"8.14E-05"},"Ribosomal L29 family protein."]
["AT1G07320","RPL4",1207.8,0.62819,0.11195,5.6114,{"v":2.01e-08,"d":"2.01E-08"},{"v":2.39e-07,"d":"2.39E-07"},"full_name=ribosomal protein L4. ribosomal protein L4. encodes a plastid ribosomal protein L4","AT1G32990","PRPL11",1419.9,0.62482,0.13015,4.8009,{"v":1.58e-06,"d":"1.58E-06"},{"v":1.88E-5,"d":"1.88E-05"},"full_name=plastid ribosomal protein l11. plastid ribosomal protein l11. mutant has Decreased effective quantum yield of photosystem II; Pale green plants; Reduced growth rate; Plastid Ribosomal Protein L11","AT4G12580",null,39.101,2.5016,0.5573,4.4888,{"v":7.16e-06,"d":"7.16E-06"},{"v":8.34e-05,"d":"8.34E-05"},"hypothetical protein."]
["AT3G20230",null,1021.2,0.68729,0.12261,5.6053,{"v":2.08e-08,"d":"2.08E-08"},{"v":2.47e-07,"d":"2.47E-07"},"Ribosomal L18p/L5e family protein.","AT3G22660","EBP2",1192,-0.63433,0.13225,-4.7963,{"v":1.62e-06,"d":"1.62E-06"},{"v":1.92e-05,"d":"1.92E-05"},"rRNA processing protein-like protein.","AT5G16960",null,21.864,5.3868,1.2007,4.4865,{"v":7.24e-06,"d":"7.24E-06"},{"v":8.41e-05,"d":"8.41E-05"},"Zinc-binding dehydrogenase family protein."]
["AT4G27410","RD26",1095.3,-1.2152,0.21685,-5.6038,{"v":2.1e-08,"d":"2.10E-08"},{"v":2.49e-07,"d":"2.49E-07"},"full_name=RESPONSIVE TO DESICCATION 26. NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes a NAC transcription factor induced in response to dessication. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.","AT1G14120","ATDAO2",31.669,2.7624,0.576,4.7958,{"v":1.62e-06,"d":"1.62E-06"},{"v":1.92e-05,"d":"1.92E-05"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT1G28660",null,112.4,-1.5069,0.3361,-4.4835,{"v":7.34E-6,"d":"7.34E-06"},{"v":8.53E-5,"d":"8.53E-05"},"GDSL-like Lipase/Acylhydrolase superfamily protein."]
["AT5G08400",null,363.73,0.99981,0.1786,5.5982,{"v":2.17e-08,"d":"2.17E-08"},{"v":2.57e-07,"d":"2.57E-07"},"structural maintenance of chromosomes-like protein, putative (DUF3531).","AT5G49850",null,15.248,7.8109,1.6306,4.7901,{"v":1.67e-06,"d":"1.67E-06"},{"v":1.97e-05,"d":"1.97E-05"},"Mannose-binding lectin superfamily protein.","AT3G21560","UGT84A2",1269.5,0.7348,0.16409,4.478,{"v":7.54e-06,"d":"7.54E-06"},{"v":8.73e-05,"d":"8.73E-05"},"full_name=UDP-glucosyl transferase 84A2. UDP-Glycosyltransferase superfamily protein. Encodes a protein with sinapic acid:UDP-glucose glucosyltransferase activity. Mutants defective in this gene are hyper-fluorescent (which accumulate in their trichomes a compound that is likely to be 3',5'-dimethoxynaringenin chalcone or sinapoyltriacetic acid lactone, potential products of the concerted action of 4-coumarate CoA ligase and chalcone synthase on sinapic acid). Also shown to be required for Arabidopsis nonhost resistance to the Asian soybean rust pathogen Phakopsora pachyrhizi."]
["AT5G06110","ATGLSA2",1254.3,0.68019,0.1217,5.5891,{"v":2.28e-08,"d":"2.28E-08"},{"v":2.7e-07,"d":"2.70E-07"},"DnaJ and myb-like DNA-binding domain-containing protein.","AT1G76580",null,235.07,-1.0294,0.21527,-4.7819,{"v":1.74e-06,"d":"1.74E-06"},{"v":2.05E-5,"d":"2.05E-05"},"Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein.","AT2G29530","TIM10",450.28,-0.80937,0.18096,-4.4727,{"v":7.72e-06,"d":"7.72E-06"},{"v":8.92E-5,"d":"8.92E-05"},"Tim10/DDP family zinc finger protein. Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus. Together with AtTIM9, AtTIM10 is non-redundantly essential for maintaining mitochondrial function of early embryo proper cells and endosperm free-nuclei."]
["AT3G48140",null,175.01,-1.3581,0.24328,-5.5825,{"v":2.37E-8,"d":"2.37E-08"},{"v":2.8e-07,"d":"2.80E-07"},"B12D protein.","AT2G18560",null,25.118,3.3532,0.70202,4.7764,{"v":1.78e-06,"d":"1.78E-06"},{"v":2.1e-05,"d":"2.10E-05"},"UDP-Glycosyltransferase superfamily protein.","AT2G07725",null,20.916,4.7917,1.0726,4.4672,{"v":7.92e-06,"d":"7.92E-06"},{"v":9.13e-05,"d":"9.13E-05"},"Ribosomal L5P family protein."]
["AT3G23170","PRP",571.04,2.8014,0.50234,5.5768,{"v":2.45e-08,"d":"2.45E-08"},{"v":2.89e-07,"d":"2.89E-07"},"hypothetical protein.","AT3G56410",null,31.448,3.1459,0.6587,4.776,{"v":1.79E-6,"d":"1.79E-06"},{"v":2.1e-05,"d":"2.10E-05"},"hypothetical protein (DUF3133).","AT2G26800","HMGCOA",154.96,1.2013,0.26903,4.4651,{"v":8e-06,"d":"8.00E-06"},{"v":9.21e-05,"d":"9.21E-05"},"Aldolase superfamily protein. Mutant has increased seed ile, leu and val as well as his and arg."]
["AT3G21540",null,667.29,0.7387,0.13255,5.5731,{"v":2.5e-08,"d":"2.50E-08"},{"v":2.94e-07,"d":"2.94E-07"},"transducin family protein / WD-40 repeat family protein.","AT1G77410","BGAL16",72.34,-1.871,0.39268,-4.7646,{"v":1.89e-06,"d":"1.89E-06"},{"v":2.22e-05,"d":"2.22E-05"},"full_name=beta-galactosidase 16. beta-galactosidase 16.","AT3G25770","AOC2",566.46,-0.97839,0.21937,-4.4599,{"v":8.2e-06,"d":"8.20E-06"},{"v":9.41e-05,"d":"9.41E-05"},"full_name=allene oxide cyclase 2. allene oxide cyclase 2. Encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is induced during senescence, a process that involves jasmonic acid signalling pathway. Note: Nomenclature for Arabidopsis allene oxide cyclase 2 (AOC2, AT3G25770) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC2 (AT3G25770) is also referred to as AOC3 in He et al. 2002 Plant Physiology, 128:876-884."]
["AT5G05170","CEV1",3278.9,-0.47595,0.085507,-5.5662,{"v":2.6e-08,"d":"2.60E-08"},{"v":3.05e-07,"d":"3.05E-07"},"full_name=CONSTITUTIVE EXPRESSION OF VSP 1. Cellulose synthase family protein. Encodes a cellulose synthase isomer. CESA3 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA3, along with CESA1 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. The xylem cells in primary root have reduced cell expansion and higher than normal lignification.","AT5G01500","TAAC",255.91,-0.99233,0.20894,-4.7493,{"v":2.04E-6,"d":"2.04E-06"},{"v":2.38e-05,"d":"2.38E-05"},"full_name=thylakoid ATP/ADP carrier. thylakoid ATP/ADP carrier. encodes an ATP/ADP carrier that is located to the thylakoid membrane involved in providing ATP during thylakoid biogenesis and turnover","AT1G21780",null,286.83,1.0371,0.23299,4.4512,{"v":8.54e-06,"d":"8.54E-06"},{"v":9.78e-05,"d":"9.78E-05"},"BTB/POZ domain-containing protein. BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B."]
["AT1G73480","MAGL4",498.39,0.85951,0.15452,5.5626,{"v":2.66E-8,"d":"2.66E-08"},{"v":3.11e-07,"d":"3.11E-07"},"alpha/beta-Hydrolases superfamily protein.","AT1G20950",null,630.24,0.77576,0.16346,4.7458,{"v":2.08E-6,"d":"2.08E-06"},{"v":2.42e-05,"d":"2.42E-05"},"Phosphofructokinase family protein.","AT2G20140","RPT2b",349.15,-0.85782,0.1928,-4.4493,{"v":8.61e-06,"d":"8.61E-06"},{"v":9.84e-05,"d":"9.84E-05"},"full_name=regulatory particle AAA-ATPase 2b. AAA-type ATPase family protein. Encodes one of the two RPT2 (26S proteasome subunit RPT2) paralogs: RPT2a (At4g29040) and RPT2b (At2g20140). RPT2b can not complement the rpt2a mutant phenotype. rpt2a rpt2b double mutants are embryo lethal."]
["AT5G54080","HGO",715.57,-0.74092,0.1332,-5.5624,{"v":2.66E-8,"d":"2.66E-08"},{"v":3.11e-07,"d":"3.11E-07"},"full_name=homogentisate 1,2-dioxygenase. homogentisate 1,2-dioxygenase. Encodes a homogentisate 1,2-dioxygenase that can convert homogentisate to malylacetoacetate and is likely to be involved in tyrosine catabolism.","AT3G14130","HAOX1",313.08,-1.0191,0.21475,-4.7455,{"v":2.08E-6,"d":"2.08E-06"},{"v":2.42e-05,"d":"2.42E-05"},"Aldolase-type TIM barrel family protein.","AT4G24800","ECIP1",1175.6,0.61215,0.1376,4.4487,{"v":8.64e-06,"d":"8.64E-06"},{"v":9.85e-05,"d":"9.85E-05"},"full_name=EIN2 C-terminus Interacting Protein 1. MA3 domain-containing protein."]
["AT1G19180","JAZ1",3068.1,-0.80838,0.14547,-5.5569,{"v":2.75e-08,"d":"2.75E-08"},{"v":3.2e-07,"d":"3.20E-07"},"full_name=jasmonate-zim-domain protein 1. jasmonate-zim-domain protein 1. JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.","AT5G43600","UAH",728.67,-0.72594,0.15302,-4.744,{"v":2.1e-06,"d":"2.10E-06"},{"v":2.43e-05,"d":"2.43E-05"},"full_name=ureidoglycolate amidohydrolase. ureidoglycolate amidohydrolase. Encodes a protein with ureidoglycolate amidohydrolase activity in vitro. It is 27% identical and 43% similar to the E. coli allantoate amidohydrolase (AAH), but, in vitro assays with purified protein and allantoate as a substrate do not show any increase in ammonium concentration, indicating that there this enzyme has no AAH activity.","AT1G71500","PSB33",696.33,0.692,0.15557,4.4482,{"v":8.66e-06,"d":"8.66E-06"},{"v":9.86e-05,"d":"9.86E-05"},"Rieske (2Fe-2S) domain-containing protein. Encodes PSB33, a protein conserved in the plastid lineage. PSB33 is associated with the chloroplast thylakoid membrane and provides stability to Photosystem II."]
["AT1G30230","eEF-1Bb1",7149.7,0.47117,0.084821,5.5548,{"v":2.78e-08,"d":"2.78E-08"},{"v":3.23e-07,"d":"3.23E-07"},"full_name=eukaryotic elongation factor 1B beta 1. translation elongation factor EF1B/ribosomal protein S6 family protein. Encodes a guanine nucleotide exchange factor that plays an important role in translation elongation. It is localized in the plasma membrane and cytosol. Mutants display ectopic lignin deposition as well as cell expansion defects","AT3G14420","GOX1",1736.3,0.61297,0.12931,4.7402,{"v":2.14e-06,"d":"2.14E-06"},{"v":2.47e-05,"d":"2.47E-05"},"full_name=glycolate oxidase 1. Aldolase-type TIM barrel family protein. Encodes a glycolate oxidase that modulates reactive oxygen species-mediated signal transduction during nonhost resistance.","AT1G05840",null,279.22,0.97881,0.22033,4.4425,{"v":8.89e-06,"d":"8.89E-06"},{"v":1.01E-4,"d":"1.01E-04"},"Eukaryotic aspartyl protease family protein."]
["AT1G47570",null,667.71,0.76285,0.13742,5.5511,{"v":2.84E-8,"d":"2.84E-08"},{"v":3.29e-07,"d":"3.29E-07"},"RING/U-box superfamily protein.","AT2G34810","ATBBE16",45.622,2.2913,0.48425,4.7316,{"v":2.23e-06,"d":"2.23E-06"},{"v":2.57e-05,"d":"2.57E-05"},"FAD-binding Berberine family protein.","AT2G37200","CASPL5A1",396.74,1.0628,0.23988,4.4306,{"v":9.4e-06,"d":"9.40E-06"},{"v":1.06E-4,"d":"1.06E-04"},"Uncharacterized protein family (UPF0497)."]
["AT4G20880",null,383.49,-1.001,0.18038,-5.5495,{"v":2.87e-08,"d":"2.87E-08"},{"v":3.32e-07,"d":"3.32E-07"},"ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2).","AT4G21800","QQT2",345.85,-0.91984,0.19455,-4.7279,{"v":2.27e-06,"d":"2.27E-06"},{"v":2.62E-5,"d":"2.62E-05"},"full_name=quatre-quart2. P-loop containing nucleoside triphosphate hydrolases superfamily protein. Encodes QQT2. Required for early embryo development. qqt1 mutant lines are embryo-defective. Participates in the organization of microtubules during cell division. Interacts with QQT1 (encoded by AT5G22370).","AT3G19100","TAGK2",735.01,0.70733,0.15969,4.4295,{"v":9.44e-06,"d":"9.44E-06"},{"v":1.07E-4,"d":"1.07E-04"},"Protein kinase superfamily protein."]
["AT1G53510","MPK18",1107.7,-0.61665,0.11119,-5.5457,{"v":2.93e-08,"d":"2.93E-08"},{"v":3.38e-07,"d":"3.38E-07"},"full_name=mitogen-activated protein kinase 18. mitogen-activated protein kinase 18. member of MAP Kinase","AT4G04620","ATG8B",192.62,-1.1183,0.23684,-4.7216,{"v":2.34E-6,"d":"2.34E-06"},{"v":2.69E-5,"d":"2.69E-05"},"full_name=autophagy 8b. Ubiquitin-like superfamily protein.","AT1G07210",null,439.42,-0.88368,0.19979,-4.4231,{"v":9.73E-6,"d":"9.73E-06"},{"v":1.1E-4,"d":"1.10E-04"},"Ribosomal protein S18."]
["AT1G78060",null,1329.7,0.88288,0.15934,5.541,{"v":3.01e-08,"d":"3.01E-08"},{"v":3.47e-07,"d":"3.47E-07"},"Glycosyl hydrolase family protein.","AT5G48890","LATE",19.765,4.1059,0.8704,4.7172,{"v":2.39E-6,"d":"2.39E-06"},{"v":2.75e-05,"d":"2.75E-05"},"full_name=LATE FLOWERING. C2H2-like zinc finger protein. Encodes a C(2) H(2) -type zinc-finger transcriptional regulator and is expressed in the leaf vasculature and the vegetative shoot apical meristem and controls the transition to flowering.","AT3G27870","ALA8",309.44,0.99221,0.22447,4.4202,{"v":9.86e-06,"d":"9.86E-06"},{"v":1.11E-4,"d":"1.11E-04"},"ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein."]
["AT4G16490",null,846.42,-0.90517,0.16352,-5.5354,{"v":3.1E-8,"d":"3.10E-08"},{"v":3.58E-7,"d":"3.58E-07"},"ARM repeat superfamily protein.","AT1G05870",null,212.74,1.0209,0.2166,4.7131,{"v":2.44e-06,"d":"2.44E-06"},{"v":2.8E-5,"d":"2.80E-05"},"hypothetical protein (DUF1685).","AT3G48730","GSA2",1016.4,-0.65585,0.14854,-4.4154,{"v":1.01E-5,"d":"1.01E-05"},{"v":1.13E-4,"d":"1.13E-04"},"full_name=glutamate-1-semialdehyde 2,1-aminomutase 2. glutamate-1-semialdehyde 2,1-aminomutase 2."]
["AT2G41650",null,822.65,0.68889,0.12448,5.5343,{"v":3.12e-08,"d":"3.12E-08"},{"v":3.59e-07,"d":"3.59E-07"},"hypothetical protein.","AT4G26520","FBA7",118.62,1.4169,0.30079,4.7107,{"v":2.47e-06,"d":"2.47E-06"},{"v":2.83E-5,"d":"2.83E-05"},"full_name=fructose-bisphosphate aldolase 7. Aldolase superfamily protein.","AT5G26280",null,1063.5,-0.64241,0.1456,-4.4122,{"v":1.02e-05,"d":"1.02E-05"},{"v":1.15E-4,"d":"1.15E-04"},"TRAF-like family protein."]
["AT2G39210","PIC30",201.59,1.6181,0.29254,5.5313,{"v":3.18E-8,"d":"3.18E-08"},{"v":3.65E-7,"d":"3.65E-07"},"Major facilitator superfamily protein.","AT1G75820","CLV1",219.61,1.0014,0.21278,4.7064,{"v":2.52E-6,"d":"2.52E-06"},{"v":2.88e-05,"d":"2.88E-05"},"full_name=CLAVATA 1. Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain.","AT3G25900","HMT-1",149.1,1.3388,0.30362,4.4094,{"v":1.04E-5,"d":"1.04E-05"},{"v":1.16E-4,"d":"1.16E-04"},"Homocysteine S-methyltransferase family protein."]
["AT4G29840","MTO2",2297.6,0.50961,0.092178,5.5286,{"v":3.23e-08,"d":"3.23E-08"},{"v":3.69e-07,"d":"3.69E-07"},"full_name=METHIONINE OVER-ACCUMULATOR 2. Pyridoxal-5'-phosphate-dependent enzyme family protein. threonine synthase","AT3G25780","AOC3",206,-1.0867,0.23144,-4.6954,{"v":2.66e-06,"d":"2.66E-06"},{"v":3.03e-05,"d":"3.03E-05"},"full_name=allene oxide cyclase 3. allene oxide cyclase 3. Encodes allene oxide cyclase, one of the enzymes involved in jasmonic acid biosynthesis. One of four genes in Arabidopsis that encode this enzyme. mRNA expression is upregulated in senescing leaves. Note: Nomenclature for Arabidopsis allene oxide cyclase 3 (AOC3, AT3G25780) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC3 (AT3G25780) is also referred to as AOC2 in He et al. 2002 Plant Physiology, 128:876-884.","AT4G32285","CAP1",703.34,0.68443,0.15533,4.4063,{"v":1.05e-05,"d":"1.05E-05"},{"v":1.17E-4,"d":"1.17E-04"},"ENTH/ANTH/VHS superfamily protein."]
["AT2G45190","AFO",911.5,-0.68352,0.1237,-5.5255,{"v":3.29e-08,"d":"3.29E-08"},{"v":3.75e-07,"d":"3.75E-07"},"full_name=ABNORMAL FLORAL ORGANS. Plant-specific transcription factor YABBY family protein. Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS).","AT2G41740","VLN2",387.17,0.78694,0.16776,4.6909,{"v":2.72e-06,"d":"2.72E-06"},{"v":3.09e-05,"d":"3.09E-05"},"full_name=villin 2. villin 2. Encodes a protein with high homology to animal villin.","AT3G10530",null,210.29,-1.055,0.2396,-4.4031,{"v":1.07e-05,"d":"1.07E-05"},{"v":0.000119,"d":"1.19E-04"},"Transducin/WD40 repeat-like superfamily protein."]
["AT3G07460",null,259.73,-1.107,0.20059,-5.5186,{"v":3.42e-08,"d":"3.42E-08"},{"v":3.9e-07,"d":"3.90E-07"},"transmembrane protein, putative (Protein of unknown function, DUF538).","AT2G01350","QPT",1197.5,-0.69711,0.14867,-4.6888,{"v":2.75e-06,"d":"2.75E-06"},{"v":3.12e-05,"d":"3.12E-05"},"full_name=quinolinate phoshoribosyltransferase. quinolinate phoshoribosyltransferase. At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.","AT1G75960",null,28.646,2.9526,0.67132,4.3982,{"v":1.09e-05,"d":"1.09E-05"},{"v":1.21E-4,"d":"1.21E-04"},"AMP-dependent synthetase and ligase family protein."]
["AT1G55810","UKL3",133.69,-1.8574,0.33681,-5.5148,{"v":3.49e-08,"d":"3.49E-08"},{"v":3.97e-07,"d":"3.97E-07"},"full_name=uridine kinase-like 3. uridine kinase-like 3. One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.","AT1G47970",null,838.42,-0.65017,0.13908,-4.6747,{"v":2.94e-06,"d":"2.94E-06"},{"v":3.33e-05,"d":"3.33E-05"},"nucleolin.","AT4G15770",null,352.32,-0.84936,0.19331,-4.3939,{"v":1.11E-5,"d":"1.11E-05"},{"v":0.000123,"d":"1.23E-04"},"RNA binding protein."]
["AT2G22780","PMDH1",5622.9,0.48114,0.08729,5.512,{"v":3.55E-8,"d":"3.55E-08"},{"v":4.02e-07,"d":"4.02E-07"},"full_name=peroxisomal NAD-malate dehydrogenase 1. peroxisomal NAD-malate dehydrogenase 1. encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.","AT1G80820","CCR2",27.789,-4.6991,1.0062,-4.6701,{"v":3.01E-6,"d":"3.01E-06"},{"v":3.4E-5,"d":"3.40E-05"},"full_name=cinnamoyl coa reductase. cinnamoyl coa reductase. Encodes an cinnamoyl CoA reductase isoform. Involved in lignin biosynthesis.","AT1G51745","SL1",328.14,0.94419,0.21522,4.3871,{"v":1.15E-5,"d":"1.15E-05"},{"v":1.27E-4,"d":"1.27E-04"},"Tudor/PWWP/MBT superfamily protein."]
["AT3G05937",null,119.06,1.6109,0.29233,5.5106,{"v":3.58e-08,"d":"3.58E-08"},{"v":4.05e-07,"d":"4.05E-07"},"hypothetical protein.","AT5G09220","AAP2",173.03,1.143,0.24481,4.6687,{"v":3.03e-06,"d":"3.03E-06"},{"v":3.42e-05,"d":"3.42E-05"},"full_name=amino acid permease 2. amino acid permease 2. member of AAAP family","AT3G46780","PTAC16",903.61,0.87453,0.19952,4.3832,{"v":1.17E-5,"d":"1.17E-05"},{"v":0.000129,"d":"1.29E-04"},"full_name=plastid transcriptionally active 16. plastid transcriptionally active 16."]
["AT4G38770","PRP4",56.759,-2.4445,0.44415,-5.5037,{"v":3.72e-08,"d":"3.72E-08"},{"v":4.2E-7,"d":"4.20E-07"},"full_name=proline-rich protein 4. proline-rich protein 4. Encodes one of four proline-rich proteins in Arabidopsis which are predicted to localize to the cell wall. Transcripts are most abundant in aerial organs of the plant.","AT5G14920","GASA14",565.71,0.91296,0.19563,4.6668,{"v":3.06e-06,"d":"3.06E-06"},{"v":3.44e-05,"d":"3.44E-05"},"Gibberellin-regulated family protein. Encodes a GASA domain containing protein that regulates increases in plant growth through GA-induced and DELLA-dependent signal transduction and that can increase abiotic stress resistance by reducing ROS accumulation.","AT1G33110",null,383.01,0.85774,0.19577,4.3813,{"v":1.18e-05,"d":"1.18E-05"},{"v":0.00013,"d":"1.30E-04"},"MATE efflux family protein."]
["AT4G18390","TCP2",252.5,1.2752,0.23187,5.4994,{"v":3.81e-08,"d":"3.81E-08"},{"v":4.3e-07,"d":"4.30E-07"},"full_name=TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2. TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2.","AT4G39970",null,225.18,0.98206,0.2107,4.6609,{"v":3.15e-06,"d":"3.15E-06"},{"v":3.54E-5,"d":"3.54E-05"},"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein.","AT2G37190",null,1928.1,-0.64563,0.14745,-4.3787,{"v":1.19E-5,"d":"1.19E-05"},{"v":0.000131,"d":"1.31E-04"},"Ribosomal protein L11 family protein."]
["AT5G13870","XTH5",225.26,1.5941,0.29052,5.4871,{"v":4.09e-08,"d":"4.09E-08"},{"v":4.59e-07,"d":"4.59E-07"},"full_name=xyloglucan endotransglucosylase/hydrolase 5. xyloglucan endotransglucosylase/hydrolase 5. EXGT-A4, endoxyloglucan transferase,","AT1G18910","BTSL2",66.733,1.851,0.39744,4.6573,{"v":3.2e-06,"d":"3.20E-06"},{"v":3.59e-05,"d":"3.59E-05"},"zinc ion binding protein.","AT2G32230","PRORP1",894.94,-0.65152,0.14908,-4.3701,{"v":1.24E-5,"d":"1.24E-05"},{"v":1.36E-4,"d":"1.36E-04"},"full_name=proteinaceous RNase P 1. proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs."]
["AT1G77840",null,914.31,0.64962,0.11859,5.4781,{"v":4.3e-08,"d":"4.30E-08"},{"v":4.83e-07,"d":"4.83E-07"},"Translation initiation factor IF2/IF5.","AT5G65280","GCL1",304.8,-1.077,0.23153,-4.6515,{"v":3.29e-06,"d":"3.29E-06"},{"v":3.68E-5,"d":"3.68E-05"},"full_name=GCR2-like 1. GCR2-like 1. Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor. Loss of function mutations in GCL1 show no ABA response defects based on assays of seed germination and seedling development.GCL1 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase.","AT5G07090",null,3656.5,-0.59918,0.13717,-4.3681,{"v":1.25e-05,"d":"1.25E-05"},{"v":1.37E-4,"d":"1.37E-04"},"Ribosomal protein S4 (RPS4A) family protein."]
["AT1G02500","SAM1",2264.2,-0.58619,0.10712,-5.4724,{"v":4.44e-08,"d":"4.44E-08"},{"v":4.98e-07,"d":"4.98E-07"},"full_name=S-adenosylmethionine synthetase 1. S-adenosylmethionine synthetase 1. encodes a S-adenosylmethionine synthetase. SAM1 is regulated by protein S-nitrosylation. The covalent binding of nitric oxide (NO) to the Cys114 residue inhibits the enzyme activity.","AT1G31070","GlcNAc1pUT1",419.43,0.79407,0.17073,4.6511,{"v":3.3e-06,"d":"3.30E-06"},{"v":3.69e-05,"d":"3.69E-05"},"full_name=N-acetylglucosamine-1-phosphate uridylyltransferase 1. N-acetylglucosamine-1-phosphate uridylyltransferase 1. Encodes a protein that functions as an N-acetylglucosamine-1-phosphate uridylyltransferase that catalyzes the formation of UDP-N-acetylglucosamine (UDP-GlcNAc). This is an essential precursor for glycolipid and glycoprotein synthesis and is also used for regulatory protein modification in signaling pathways. The enzyme can also catalyze the reverse reaction using both UDP-GlcNAc and the less common UDP-N-acetylgalactosamine as substrates.","AT1G36390","CGE2",181.01,-1.1732,0.26864,-4.3672,{"v":1.26E-5,"d":"1.26E-05"},{"v":0.000138,"d":"1.38E-04"},"Co-chaperone GrpE family protein."]
["AT1G77580","VETH3",477.3,-0.86573,0.15839,-5.466,{"v":4.6e-08,"d":"4.60E-08"},{"v":5.14e-07,"d":"5.14E-07"},"filament-like protein (DUF869).","AT3G58660",null,999.59,-0.60572,0.13056,-4.6393,{"v":3.5e-06,"d":"3.50E-06"},{"v":3.89e-05,"d":"3.89E-05"},"Ribosomal protein L1p/L10e family.","AT4G01037","WTF1",520.52,-0.79776,0.18291,-4.3615,{"v":1.29E-5,"d":"1.29E-05"},{"v":0.000141,"d":"1.41E-04"},"full_name=what's this factor?. Ubiquitin carboxyl-terminal hydrolase family protein."]
["AT3G18130","RACK1C_AT",1346.2,0.59105,0.10818,5.4634,{"v":4.67e-08,"d":"4.67E-08"},{"v":5.21e-07,"d":"5.21E-07"},"full_name=receptor for activated C kinase 1C. receptor for activated C kinase 1C. Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1C has no phenotype on its own and probably acts redundantly with RACK1A and RACK1B.","AT1G56110","NOP56",2644.2,-0.46555,0.10037,-4.6382,{"v":3.51e-06,"d":"3.51E-06"},{"v":3.9e-05,"d":"3.90E-05"},"full_name=homolog of nucleolar protein NOP56. NOP56-like pre RNA processing ribonucleoprotein. NOP56-like protein","AT2G44580",null,59.905,-1.9677,0.45185,-4.3547,{"v":1.33E-5,"d":"1.33E-05"},{"v":1.45E-4,"d":"1.45E-04"},"zinc ion binding protein."]
["AT5G19530","ACL5",410.59,-1.1335,0.20782,-5.4543,{"v":4.92e-08,"d":"4.92E-08"},{"v":5.47e-07,"d":"5.47E-07"},"full_name=ACAULIS 5. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function.","AT1G23480","CSLA03",13.986,7.6804,1.6574,4.634,{"v":3.59e-06,"d":"3.59E-06"},{"v":3.98e-05,"d":"3.98E-05"},"full_name=cellulose synthase-like A3. cellulose synthase-like A3. encodes a gene similar to cellulose synthase","AT1G75860",null,283.41,0.90842,0.20868,4.3531,{"v":1.34E-5,"d":"1.34E-05"},{"v":1.46E-4,"d":"1.46E-04"},"DNA ligase."]
["AT4G17610","TRM3",290.8,1.0467,0.19192,5.4535,{"v":4.94e-08,"d":"4.94E-08"},{"v":5.49e-07,"d":"5.49E-07"},"tRNA/rRNA methyltransferase (SpoU) family protein.","AT5G08680",null,2491.9,0.52665,0.11369,4.6321,{"v":3.62e-06,"d":"3.62E-06"},{"v":4.01e-05,"d":"4.01E-05"},"ATP synthase alpha/beta family protein. Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level.","AT1G53570","MAP3KA",292.77,0.89418,0.20544,4.3526,{"v":1.35e-05,"d":"1.35E-05"},{"v":1.46E-4,"d":"1.46E-04"},"full_name=mitogen-activated protein kinase kinase kinase 3. mitogen-activated protein kinase kinase kinase 3. MEK kinase (MAP3Ka)"]
["AT1G05350",null,359.47,-0.97909,0.17972,-5.4478,{"v":5.1E-8,"d":"5.10E-08"},{"v":5.66e-07,"d":"5.66E-07"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT3G10520","HB2",178.28,1.1346,0.24513,4.6287,{"v":3.68e-06,"d":"3.68E-06"},{"v":4.07E-5,"d":"4.07E-05"},"full_name=haemoglobin 2. hemoglobin 2. Encodes a class 2 non-symbiotic hemoglobin. Over-expression of AHb2 in seeds led to a 40% increase in the total fatty acid content of developing and mature seeds in three subsequent generations. This was mainly due to an increase in the poly-unsaturated C18:2 (omega-6) linoleic and C18:3 (omega-3) alpha-linolenic acids.","AT3G55580","TCF1",13.635,7.2086,1.6574,4.3494,{"v":1.37e-05,"d":"1.37E-05"},{"v":0.000148,"d":"1.48E-04"},"Regulator of chromosome condensation (RCC1) family protein."]
["AT3G14990","DJ1A",658.22,-0.90707,0.16664,-5.4433,{"v":5.23e-08,"d":"5.23E-08"},{"v":5.79e-07,"d":"5.79E-07"},"full_name=DJ-1 homolog A. Class I glutamine amidotransferase-like superfamily protein. Encodes a homolog of animal DJ-1 superfamily protein. In the A. thaliana genome, three genes encoding close homologs of human DJ-1 were identified AT3G14990 (DJ1A), AT1G53280 (DJ1B) and AT4G34020 (DJ1C). Among the three homologs, DJ1C is essential for chloroplast development and viability. It exhibits glyoxalase activity towards glyoxal and methylglyoxal.","AT1G27480",null,56.21,1.8656,0.40339,4.6248,{"v":3.75e-06,"d":"3.75E-06"},{"v":4.13e-05,"d":"4.13E-05"},"alpha/beta-Hydrolases superfamily protein.","AT1G64060","RBOH F",112.28,1.3449,0.30935,4.3474,{"v":1.38E-5,"d":"1.38E-05"},{"v":0.000149,"d":"1.49E-04"},"full_name=respiratory burst oxidase protein F. respiratory burst oxidase protein F. Interacts with AtrbohD gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site."]
["AT1G30320",null,123.49,1.5496,0.28508,5.4355,{"v":5.46e-08,"d":"5.46E-08"},{"v":6.03e-07,"d":"6.03E-07"},"Remorin family protein.","AT3G43600","AAO2",295.22,0.93096,0.20146,4.621,{"v":3.82e-06,"d":"3.82E-06"},{"v":4.2e-05,"d":"4.20E-05"},"full_name=aldehyde oxidase 2. aldehyde oxidase 2. Encodes an aldehyde oxidase. AAO2 does not appear to act on abscisic aldehyde in vitro but it is possible that it may function in abscisic acid biosynthesis when the activity of At2g27150 (AAO3), the primary abscisic aldehyde oxidase, is lost.","AT2G31880","SOBIR1",171.59,1.1901,0.27394,4.3443,{"v":1.4E-5,"d":"1.40E-05"},{"v":0.000151,"d":"1.51E-04"},"full_name=SUPPRESSOR OF BIR1 1. Leucine-rich repeat protein kinase family protein. Encodes a putative leucine rich repeat transmembrane protein that is expressed in response to Pseudomonas syringae. Expression of SRRLK may be required for silencing via lsiRNAs. Regulates cell death and innate immunity."]
["AT5G16110",null,938.11,-0.82198,0.15154,-5.424,{"v":5.83e-08,"d":"5.83E-08"},{"v":6.42e-07,"d":"6.42E-07"},"hypothetical protein.","AT1G29965","RPL18AD",627.11,-0.72154,0.1562,-4.6194,{"v":3.85e-06,"d":"3.85E-06"},{"v":4.22e-05,"d":"4.22E-05"},"Ribosomal protein L18ae/LX family protein.","AT3G48500","PDE312",810.8,-0.78292,0.18049,-4.3377,{"v":1.44e-05,"d":"1.44E-05"},{"v":1.55E-4,"d":"1.55E-04"},"full_name=PIGMENT DEFECTIVE 312. Nucleic acid-binding, OB-fold-like protein."]
["AT1G30880",null,1465.4,0.64028,0.11811,5.4212,{"v":5.92e-08,"d":"5.92E-08"},{"v":6.51e-07,"d":"6.51E-07"},"hypothetical protein.","AT2G15480","UGT73B5",200.82,-1.0476,0.22681,-4.6187,{"v":3.86e-06,"d":"3.86E-06"},{"v":4.23e-05,"d":"4.23E-05"},"full_name=UDP-glucosyl transferase 73B5. UDP-glucosyl transferase 73B5.","AT2G28790",null,388.99,-0.80916,0.18656,-4.3374,{"v":1.44e-05,"d":"1.44E-05"},{"v":1.55E-4,"d":"1.55E-04"},"Pathogenesis-related thaumatin superfamily protein."]
["AT4G24275",null,400.96,0.88266,0.16294,5.4169,{"v":6.06E-8,"d":"6.06E-08"},{"v":6.65e-07,"d":"6.65E-07"},"hypothetical protein. Identified as a screen for stress-responsive genes.","AT3G05920","ATHMP24",13.453,7.6271,1.6546,4.6096,{"v":4.03e-06,"d":"4.03E-06"},{"v":4.41e-05,"d":"4.41E-05"},"Heavy metal transport/detoxification superfamily protein.","AT3G01420","DOX1",27.884,-3.6257,0.83673,-4.3331,{"v":1.47E-5,"d":"1.47E-05"},{"v":0.000157,"d":"1.57E-04"},"Peroxidase superfamily protein. Encodes an alpha-dioxygenase involved in protection against oxidative stress and cell death. Induced in response to Salicylic acid and oxidative stress. Independent of NPR1 in induction by salicylic acid."]
["AT3G04300",null,37.97,-3.5838,0.66227,-5.4113,{"v":6.26e-08,"d":"6.26E-08"},{"v":6.85e-07,"d":"6.85E-07"},"RmlC-like cupins superfamily protein.","AT1G13750","PAP1",99.856,1.502,0.32617,4.605,{"v":4.13e-06,"d":"4.13E-06"},{"v":4.5e-05,"d":"4.50E-05"},"Purple acid phosphatases superfamily protein. Encodes a purple acid phosphatase whose expression is responsive to both phosphate (Pi) and phosphite (Phi) in roots.","AT1G03910","CTN",801.76,0.80465,0.18598,4.3265,{"v":1.52E-5,"d":"1.52E-05"},{"v":0.000162,"d":"1.62E-04"},"cactus-binding carboxy-terminal, cactin. Encodes the Arabidopsis homolog of a conserved eukaryotic protein without known functional domains. The protein that localizes to nuclear speckles and colocalizes with known splicing proteins."]
["AT2G03470",null,466.94,-1.0177,0.1882,-5.4074,{"v":6.39e-08,"d":"6.39E-08"},{"v":7e-07,"d":"7.00E-07"},"ELM2 domain-containing protein.","AT5G39080",null,145.56,1.4077,0.30571,4.6046,{"v":4.13e-06,"d":"4.13E-06"},{"v":4.5e-05,"d":"4.50E-05"},"HXXXD-type acyl-transferase family protein.","AT2G19870",null,201.38,-1.0583,0.24464,-4.3262,{"v":1.52E-5,"d":"1.52E-05"},{"v":0.000162,"d":"1.62E-04"},"tRNA/rRNA methyltransferase (SpoU) family protein."]
["AT2G20570","GPRI1",305.61,1.0126,0.18736,5.4049,{"v":6.49e-08,"d":"6.49E-08"},{"v":7.08e-07,"d":"7.08E-07"},"full_name=GBF's pro-rich region-interacting factor 1. GBF's pro-rich region-interacting factor 1. Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.","AT5G27930","EGR2",211.86,0.98568,0.2142,4.6016,{"v":4.19e-06,"d":"4.19E-06"},{"v":4.56e-05,"d":"4.56E-05"},"Protein phosphatase 2C family protein.","AT3G06880",null,77.972,-1.7122,0.39602,-4.3237,{"v":1.53e-05,"d":"1.53E-05"},{"v":1.63E-4,"d":"1.63E-04"},"Transducin/WD40 repeat-like superfamily protein."]
["AT3G60245",null,9217.1,0.42649,0.078996,5.3989,{"v":6.71e-08,"d":"6.71E-08"},{"v":7.3E-7,"d":"7.30E-07"},"Zinc-binding ribosomal protein family protein.","AT1G72150","PATL1",666.15,-1.0227,0.22233,-4.6,{"v":4.23e-06,"d":"4.23E-06"},{"v":4.58e-05,"d":"4.58E-05"},"full_name=PATELLIN 1. PATELLIN 1. novel cell-plate-associated protein that is related in sequence to proteins involved in membrane trafficking in other eukaryotes","AT3G45770",null,773.78,0.75586,0.17491,4.3215,{"v":1.55e-05,"d":"1.55E-05"},{"v":1.65E-4,"d":"1.65E-04"},"Polyketide synthase, enoylreductase family protein."]
["AT2G06850","XTH4",153.76,1.474,0.27333,5.3925,{"v":6.95e-08,"d":"6.95E-08"},{"v":7.54E-7,"d":"7.54E-07"},"full_name=xyloglucan endotransglucosylase/hydrolase 4. xyloglucan endotransglucosylase/hydrolase 4. endoxyloglucan transferase (EXGT-A1) gene","AT4G26080","ABI1",1623.2,-0.64487,0.14038,-4.5936,{"v":4.36e-06,"d":"4.36E-06"},{"v":4.71E-5,"d":"4.71E-05"},"full_name=ABA INSENSITIVE 1. Protein phosphatase 2C family protein. Involved in abscisic acid (ABA) signal transduction. Negative regulator of ABA promotion of stomatal closure.","AT1G05590","HEXO2",73.313,-1.6497,0.38241,-4.3139,{"v":1.6e-05,"d":"1.60E-05"},{"v":0.00017,"d":"1.70E-04"},"full_name=beta-hexosaminidase 2. beta-hexosaminidase 2. Encodes a protein with &#946;-hexosaminidase activity (the enzyme is active with p-nitrophenyl-&#946;-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-&#946;-N-acetylgalactosaminide). Chitotriose-PA was digested almost completely overnight by a 50% ammonium sulfate fraction of a supernatant yeast expressing AtHEX3."]
["AT1G25560","TEM1",222.88,1.2465,0.23128,5.3896,{"v":7.06e-08,"d":"7.06E-08"},{"v":7.65e-07,"d":"7.65E-07"},"full_name=TEMPRANILLO 1. AP2/B3 transcription factor family protein. Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. Novel transcriptional regulator involved in ethylene signaling. Promoter bound by EIN3. EDF1 in turn, binds to promoter elements in ethylene responsive genes.","AT2G14960","GH3.1",31.456,-3.0981,0.67458,-4.5926,{"v":4.38e-06,"d":"4.38E-06"},{"v":4.72e-05,"d":"4.72E-05"},"Auxin-responsive GH3 family protein. encodes a protein similar to IAA-amido synthases. Lines carrying an insertion in this gene are hypersensitive to auxin.","AT4G13990",null,130.46,1.336,0.30987,4.3115,{"v":1.62e-05,"d":"1.62E-05"},{"v":0.000172,"d":"1.72E-04"},"Exostosin family protein."]
["AT5G43810","AGO10",773.08,-0.67727,0.12571,-5.3875,{"v":7.15e-08,"d":"7.15E-08"},{"v":7.73e-07,"d":"7.73E-07"},"full_name=ARGONAUTE 10. Stabilizer of iron transporter SufD / Polynucleotidyl transferase. Encodes Argonaute10, a member of the EIF2C (elongation initiation factor 2c)/ Argonaute class of proteins. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes, controls the relative organization of central zone and peripheral zone cells in meristems. Acts in embryonic provascular tissue potentiating WUSCHEL function during meristem development in the embryo. AGO10 specifically sequesters miR166/165 to regulate shoot apical meristem development.","AT1G27330",null,353.35,0.83471,0.18178,4.5918,{"v":4.39e-06,"d":"4.39E-06"},{"v":4.74E-5,"d":"4.74E-05"},"Ribosome associated membrane protein RAMP4.","AT2G32560",null,96.478,-1.6878,0.39217,-4.3036,{"v":1.68e-05,"d":"1.68E-05"},{"v":0.000177,"d":"1.77E-04"},"F-box family protein."]
["AT2G44860","RPL24C",1779,0.52033,0.096622,5.3853,{"v":7.23e-08,"d":"7.23E-08"},{"v":7.81e-07,"d":"7.81E-07"},"Ribosomal protein L24e family protein.","AT5G04380",null,39.71,-3.2258,0.70335,-4.5864,{"v":4.51E-6,"d":"4.51E-06"},{"v":4.85E-5,"d":"4.85E-05"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT1G65280",null,713.75,0.90135,0.20952,4.3019,{"v":1.69e-05,"d":"1.69E-05"},{"v":0.000179,"d":"1.79E-04"},"DNAJ heat shock N-terminal domain-containing protein."]
["AT5G33320","CUE1",920.82,-0.63696,0.11829,-5.3848,{"v":7.25e-08,"d":"7.25E-08"},{"v":7.82e-07,"d":"7.82E-07"},"full_name=CAB UNDEREXPRESSED 1. Glucose-6-phosphate/phosphate translocator-like protein. Encodes a plastid inner envelope protein PPT (phosphoenolpyruvate/phosphate translocator) that catalyzes the transport of phosphoenolpyruvate and phosphate across the inner envelope membrane of plastids.","AT3G56590",null,225.37,0.97014,0.21156,4.5856,{"v":4.53e-06,"d":"4.53E-06"},{"v":4.87e-05,"d":"4.87E-05"},"hydroxyproline-rich glycoprotein family protein.","AT5G14680",null,333.28,0.8925,0.20757,4.2998,{"v":1.71e-05,"d":"1.71E-05"},{"v":0.00018,"d":"1.80E-04"},"Adenine nucleotide alpha hydrolases-like superfamily protein."]
["AT1G33120",null,6159.4,0.41686,0.07744,5.383,{"v":7.32e-08,"d":"7.32E-08"},{"v":7.89e-07,"d":"7.89E-07"},"Ribosomal protein L6 family.","AT2G27510","FD3",435.62,-0.80658,0.17593,-4.5847,{"v":4.55e-06,"d":"4.55E-06"},{"v":4.88E-5,"d":"4.88E-05"},"full_name=ferredoxin 3. ferredoxin 3.","AT3G43810","CAM7",710.29,-0.75419,0.17546,-4.2984,{"v":1.72e-05,"d":"1.72E-05"},{"v":0.000181,"d":"1.81E-04"},"full_name=calmodulin 7. calmodulin 7. EF hand domain protein encodes a calmodulin. Can functionally complement a yeast CaM mutant."]
["AT1G18840","IQD30",1725.1,-0.80851,0.15031,-5.3789,{"v":7.49e-08,"d":"7.49E-08"},{"v":8.05e-07,"d":"8.05E-07"},"full_name=IQ-domain 30. IQ-domain 30.","AT3G08860","PYD4",201.98,-1.3744,0.30035,-4.5761,{"v":4.74e-06,"d":"4.74E-06"},{"v":5.07e-05,"d":"5.07E-05"},"full_name=PYRIMIDINE 4. PYRIMIDINE 4. Encodes a protein that is predicted to have beta-alanine aminotransferase activity.","AT3G30460",null,27.225,2.9789,0.69374,4.2939,{"v":1.76e-05,"d":"1.76E-05"},{"v":1.84E-4,"d":"1.84E-04"},"RING/U-box superfamily protein."]
["AT2G20490","NOP10",832.68,0.70051,0.13036,5.3736,{"v":7.72e-08,"d":"7.72E-08"},{"v":8.27e-07,"d":"8.27E-07"},"nucleolar RNA-binding Nop10p family protein.","AT1G71500","PSB33",572.61,0.70444,0.15406,4.5724,{"v":4.82e-06,"d":"4.82E-06"},{"v":5.15e-05,"d":"5.15E-05"},"Rieske (2Fe-2S) domain-containing protein. Encodes PSB33, a protein conserved in the plastid lineage. PSB33 is associated with the chloroplast thylakoid membrane and provides stability to Photosystem II.","AT1G52220","CURT1C",286.4,-1.0177,0.23723,-4.2899,{"v":1.79e-05,"d":"1.79E-05"},{"v":0.000187,"d":"1.87E-04"},"CURVATURE THYLAKOID protein."]
["AT4G16780","HB-2",202.68,-1.1846,0.22063,-5.3689,{"v":7.92e-08,"d":"7.92E-08"},{"v":8.47E-7,"d":"8.47E-07"},"full_name=homeobox protein 2. homeobox protein 2. Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin.","AT1G03530","NAF1",460.55,-0.75903,0.16606,-4.5707,{"v":4.86e-06,"d":"4.86E-06"},{"v":5.18e-05,"d":"5.18E-05"},"full_name=nuclear assembly factor 1. nuclear assembly factor 1.","AT4G05400",null,172.42,-1.1048,0.25773,-4.2866,{"v":1.81e-05,"d":"1.81E-05"},{"v":0.000189,"d":"1.89E-04"},"copper ion binding protein."]
["AT3G23800","SBP3",140.05,1.5684,0.29223,5.3671,{"v":8e-08,"d":"8.00E-08"},{"v":8.55e-07,"d":"8.55E-07"},"full_name=selenium-binding protein 3. selenium-binding protein 3.","AT2G35820",null,370.84,-0.89771,0.19647,-4.5692,{"v":4.9e-06,"d":"4.90E-06"},{"v":5.21e-05,"d":"5.21E-05"},"ureidoglycolate hydrolase.","AT5G39850",null,192.05,-1.0346,0.2415,-4.284,{"v":1.84E-5,"d":"1.84E-05"},{"v":1.92E-4,"d":"1.92E-04"},"Ribosomal protein S4."]
["AT5G27760","ATHIGD2",918.14,-0.78805,0.14711,-5.3568,{"v":8.47e-08,"d":"8.47E-08"},{"v":9.02E-7,"d":"9.02E-07"},"Hypoxia-responsive family protein.","AT4G19390",null,423.84,-0.81728,0.17902,-4.5652,{"v":4.99e-06,"d":"4.99E-06"},{"v":5.29e-05,"d":"5.29E-05"},"Uncharacterized protein family (UPF0114).","AT1G62810","CuAO1",672.41,0.67189,0.15697,4.2803,{"v":1.87e-05,"d":"1.87E-05"},{"v":1.94E-4,"d":"1.94E-04"},"full_name=COPPER AMINE OXIDASE1. Copper amine oxidase family protein. Encodes COPPER AMINE OXIDASE1 (CuAO1). Contributes to abscisic acid- and polyamine-induced nitric oxide biosynthesis and abscisic acid signal transduction."]
["AT5G62300",null,4441.4,0.42805,0.079918,5.3562,{"v":8.5e-08,"d":"8.50E-08"},{"v":9.03e-07,"d":"9.03E-07"},"Ribosomal protein S10p/S20e family protein.","AT1G52280","RABG3d",136.15,1.1862,0.26033,4.5564,{"v":5.2e-06,"d":"5.20E-06"},{"v":5.51e-05,"d":"5.51E-05"},"full_name=RAB GTPase homolog G3D. RAB GTPase homolog G3D.","AT1G46554",null,230.07,1.2172,0.28476,4.2744,{"v":1.92e-05,"d":"1.92E-05"},{"v":0.000199,"d":"1.99E-04"},"other_RNA."]
["AT2G22800","HAT9",184.52,-1.2932,0.24147,-5.3558,{"v":8.52e-08,"d":"8.52E-08"},{"v":9.04e-07,"d":"9.04E-07"},"Homeobox-leucine zipper protein family. Encodes homeobox protein HAT9.","AT1G47210","CYCA3;2",395.57,0.76142,0.16735,4.5499,{"v":5.37e-06,"d":"5.37E-06"},{"v":5.68e-05,"d":"5.68E-05"},"full_name=cyclin-dependent protein kinase 3;2. cyclin-dependent protein kinase 3;2.","AT1G05270",null,408.27,0.85048,0.19904,4.2729,{"v":1.93e-05,"d":"1.93E-05"},{"v":0.0002,"d":"2.00E-04"},"TraB family protein."]
["AT5G49030","OVA2",890.39,0.67062,0.12524,5.3546,{"v":8.58e-08,"d":"8.58E-08"},{"v":9.09E-7,"d":"9.09E-07"},"full_name=ovule abortion 2. tRNA synthetase class I (I, L, M and V) family protein.","AT4G14710","ATARD2",1117.3,-0.68214,0.1501,-4.5446,{"v":5.5e-06,"d":"5.50E-06"},{"v":5.81e-05,"d":"5.81E-05"},"RmlC-like cupins superfamily protein.","AT5G04660","CYP77A4",47.593,2.1589,0.50552,4.2706,{"v":1.95E-5,"d":"1.95E-05"},{"v":2.02E-4,"d":"2.02E-04"},"full_name=cytochrome P450, family 77, subfamily A, polypeptide 4. cytochrome P450, family 77, subfamily A, polypeptide 4. encodes a protein with cytochrome P450 domain"]
["AT5G51100","FSD2",560.45,0.83021,0.15516,5.3507,{"v":8.76e-08,"d":"8.76E-08"},{"v":9.27e-07,"d":"9.27E-07"},"full_name=Fe superoxide dismutase 2. Fe superoxide dismutase 2. Fe superoxide dismutase whose mRNA levels are increased in response to exposure to UV-B.","AT3G22400","LOX5",28.232,-3.2688,0.71992,-4.5405,{"v":5.61e-06,"d":"5.61E-06"},{"v":5.91E-5,"d":"5.91E-05"},"PLAT/LH2 domain-containing lipoxygenase family protein. Encodes lipoxygenase5 (LOX5). LOX5 activity in roots facilitates green peach aphid colonization of Arabidopsis foliage by promoting green peach aphid feeding from sieve element and water consumption from xylem.","AT5G53670",null,23.272,6.5108,1.5259,4.2668,{"v":1.98E-5,"d":"1.98E-05"},{"v":2.05E-4,"d":"2.05E-04"},"transmembrane protein."]
["AT4G11820","HMGS",715.4,-0.81231,0.15187,-5.3487,{"v":8.86e-08,"d":"8.86E-08"},{"v":9.35e-07,"d":"9.35E-07"},"full_name=HYDROXYMETHYLGLUTARYL-COA SYNTHASE. hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase. Encodes a protein with hydroxymethylglutaryl-CoA synthase activity which was characterized by phenotypical complementation of the S. cerevisiae mutant.","AT2G30670",null,12.776,7.5527,1.6651,4.5358,{"v":5.74e-06,"d":"5.74E-06"},{"v":6.03e-05,"d":"6.03E-05"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT5G49645",null,427.58,1.0457,0.24525,4.2639,{"v":2.01e-05,"d":"2.01E-05"},{"v":0.000207,"d":"2.07E-04"},"hypothetical protein."]
["AT5G62440","DOM1",933.9,0.66849,0.12507,5.3449,{"v":9.05e-08,"d":"9.05E-08"},{"v":9.53e-07,"d":"9.53E-07"},"EMB514 (DUF3223). Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division.","AT1G10670","ACLA-1",1122.3,0.58482,0.12897,4.5344,{"v":5.78e-06,"d":"5.78E-06"},{"v":6.06e-05,"d":"6.06E-05"},"full_name=ATP-citrate lyase A-1. ATP-citrate lyase A-1. One of the three genes encoding subunit A of the trimeric protein ATP Citrate Lyase. Antisense ACLA-1 plants cause a reduction in cytosolic acetyl-CoA metabolism and have upregulation of stress-related genes and down-regulation of primary metabolism and growth genes, suggesting the mutation restricts normal growth and developmental processes and puts the plant into a state of stress.","AT2G38000",null,279.61,0.99455,0.23343,4.2605,{"v":2.04e-05,"d":"2.04E-05"},{"v":0.00021,"d":"2.10E-04"},"chaperone protein dnaJ-like protein."]
["AT4G21105",null,1199,0.59781,0.11189,5.3429,{"v":9.15e-08,"d":"9.15E-08"},{"v":9.62e-07,"d":"9.62E-07"},"cytochrome-c oxidase/ electron carrier.","AT1G72440","EDA25",799.06,-0.65092,0.14366,-4.5311,{"v":5.87e-06,"d":"5.87E-06"},{"v":6.15e-05,"d":"6.15E-05"},"full_name=embryo sac development arrest 25. CCAAT-binding factor. Encodes SLOW WALKER2 (SWA2), a NOC1/Mak21 homologue. Essential for coordinated cell cycle progression during female gametophyte development.","AT1G18250","ATLP-1",48.327,-2.067,0.48584,-4.2544,{"v":2.1e-05,"d":"2.10E-05"},{"v":0.000215,"d":"2.15E-04"},"Pathogenesis-related thaumatin superfamily protein. encodes a thaumatin-like protein"]
["AT2G47250",null,1044.6,0.61746,0.11573,5.3353,{"v":9.54e-08,"d":"9.54E-08"},{"v":1e-06,"d":"1.00E-06"},"RNA helicase family protein.","AT4G28890","ATL42",26.548,-3.6109,0.79772,-4.5265,{"v":6e-06,"d":"6.00E-06"},{"v":6.26e-05,"d":"6.26E-05"},"RING/U-box superfamily protein.","AT4G35940",null,197.66,1.1271,0.26504,4.2527,{"v":2.11e-05,"d":"2.11E-05"},{"v":0.000216,"d":"2.16E-04"},"hypothetical protein."]
["AT5G63980","SAL1",967.7,0.81797,0.15351,5.3284,{"v":9.91e-08,"d":"9.91E-08"},{"v":1.04E-6,"d":"1.04E-06"},"SAL1 phosphatase-like protein. Encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought (negative regulator of drought tolerance), and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration due to higher accumulation of the second messenger, inositol (1,4,5)- triphosphate (IP(3)). Involved in degradation of small mRNAs. Mutants also affect the accumulation of miRNA target cleavage products. Regulates light-dependent repression of hypocotyl elongation and flowering time via its 3'(2'),5'-bisphosphate nucleotidase activity.","AT5G49270","SHV2",13.01,7.5754,1.6763,4.5192,{"v":6.21e-06,"d":"6.21E-06"},{"v":6.47e-05,"d":"6.47E-05"},"full_name=SHAVEN 2. COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family. Involved in successfully establishing tip growth in root hairs.","AT2G34750",null,988.35,0.61009,0.1435,4.2515,{"v":2.12E-5,"d":"2.12E-05"},{"v":0.000217,"d":"2.17E-04"},"RNA polymerase I specific transcription initiation factor RRN3 protein."]
["AT2G40700","RH17",627.67,0.74682,0.14029,5.3234,{"v":1.02E-7,"d":"1.02E-07"},{"v":1.06E-6,"d":"1.06E-06"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT4G14730","LFG1",18.15,-7.1992,1.5941,-4.5161,{"v":6.3e-06,"d":"6.30E-06"},{"v":6.55e-05,"d":"6.55E-05"},"Bax inhibitor-1 family protein.","AT4G26370",null,645.03,-0.68227,0.16069,-4.2459,{"v":2.18e-05,"d":"2.18E-05"},{"v":2.22E-4,"d":"2.22E-04"},"antitermination NusB domain-containing protein."]
["AT2G25430","PICALM4A",803.02,-0.67143,0.12614,-5.3231,{"v":1.02E-7,"d":"1.02E-07"},{"v":1.07e-06,"d":"1.07E-06"},"epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-like protein.","AT5G38980",null,20.898,3.5705,0.79062,4.5161,{"v":6.3e-06,"d":"6.30E-06"},{"v":6.55e-05,"d":"6.55E-05"},"transmembrane protein.","AT3G08970","ATERDJ3A",99.123,1.4177,0.33395,4.2454,{"v":2.18e-05,"d":"2.18E-05"},{"v":2.22E-4,"d":"2.22E-04"},"DNAJ heat shock N-terminal domain-containing protein. J domain protein localized in ER lumen. Can compensate for the growth defect in jem1 scj1 mutant yeast. Also shows similarity to HSP40 proteins and is induced by heat stress. At high temperatures, mutant alleles are not transmitted through the pollen due to defects in pollen tube growth."]
["AT3G47960","GTR1",815.15,0.66268,0.12459,5.3188,{"v":1.04E-7,"d":"1.04E-07"},{"v":1.09e-06,"d":"1.09E-06"},"full_name=GLUCOSINOLATE TRANSPORTER-1. Major facilitator superfamily protein. Encodes a high-affinity, proton-dependent glucosinolate-specific transporter that is crucial for the transport of both methionine- and tryptophan-derived glucosinolates to seeds.","AT4G09600","GASA3",34.951,-2.7988,0.62023,-4.5126,{"v":6.4e-06,"d":"6.40E-06"},{"v":6.64e-05,"d":"6.64E-05"},"full_name=GAST1 protein homolog 3. GAST1 protein homolog 3. One of GASA gene family which is related to a GA-stimulated transcript (GAST) from tomato.","AT3G18050",null,130.39,-1.2533,0.29532,-4.2437,{"v":2.2e-05,"d":"2.20E-05"},{"v":2.24E-4,"d":"2.24E-04"},"GPI-anchored protein."]
["AT1G71260","ATWHY2",658.73,0.78569,0.14786,5.3136,{"v":1.07e-07,"d":"1.07E-07"},{"v":1.12e-06,"d":"1.12E-06"},"full_name=WHIRLY 2. WHIRLY 2. Encodes WHY2, a homolog of the potato p24 protein. It shares the conserved KGKAAL domain, a putative DNA-binding domain, with potato p24 and is localized to mitochondria and not the nucleus. WHY2 is a member of the Whirly family proteins present mainly in the plant kingdom performing various activities related to DNA metabolism. Crystal structure of Solanum tuberosum WHY2, a close homolog of Arabidopsis WHY2, reveal that Whirly proteins bind to single strand DNA to promote accurate repair of DNA double-strand breaks over an error-prone repair pathway.","AT5G58350","WNK4",86.075,-1.5446,0.34257,-4.509,{"v":6.51e-06,"d":"6.51E-06"},{"v":6.74e-05,"d":"6.74E-05"},"full_name=with no lysine (K) kinase 4. with no lysine (K) kinase 4. Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.","AT5G52550",null,282.64,0.92075,0.21712,4.2408,{"v":2.23E-5,"d":"2.23E-05"},{"v":0.000226,"d":"2.26E-04"},"stress response NST1-like protein."]
["AT5G15750",null,579.44,0.80663,0.15192,5.3095,{"v":1.1e-07,"d":"1.10E-07"},{"v":1.14e-06,"d":"1.14E-06"},"Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.","AT4G32250","KOC1",531.91,-0.71619,0.15911,-4.5012,{"v":6.76e-06,"d":"6.76E-06"},{"v":6.98e-05,"d":"6.98E-05"},"Protein kinase superfamily protein.","AT3G61520",null,69.974,-1.6423,0.38805,-4.2322,{"v":2.31e-05,"d":"2.31E-05"},{"v":2.34E-4,"d":"2.34E-04"},"Pentatricopeptide repeat (PPR) superfamily protein."]
["AT1G31830","PUT2",696.05,-0.803,0.1513,-5.3072,{"v":1.11E-7,"d":"1.11E-07"},{"v":1.15E-6,"d":"1.15E-06"},"full_name=POLYAMINE UPTAKE TRANSPORTER 2. Amino acid permease family protein. Encodes POLYAMINE UPTAKE TRANSPORTER 2, an amino acid permease family protein.","AT3G14310","PME3",790.22,0.59199,0.13158,4.4992,{"v":6.82e-06,"d":"6.82E-06"},{"v":7.03e-05,"d":"7.03E-05"},"full_name=pectin methylesterase 3. pectin methylesterase 3. encodes a pectin methylesterase, targeted by a cellulose binding protein (CBP) from the parasitic nematode Heterodera schachtii during parasitism.","AT3G13960","GRF5",595.85,-0.78734,0.18614,-4.2298,{"v":2.34E-5,"d":"2.34E-05"},{"v":0.000236,"d":"2.36E-04"},"full_name=growth-regulating factor 5. growth-regulating factor 5. Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower."]
["AT2G32720","CB5-B",862.83,-0.68767,0.12968,-5.303,{"v":1.14E-7,"d":"1.14E-07"},{"v":1.18e-06,"d":"1.18E-06"},"full_name=cytochrome B5 isoform B. cytochrome B5 isoform B. member of Cytochromes b5","AT1G12050","FAH",608.57,-0.66375,0.14763,-4.496,{"v":6.93e-06,"d":"6.93E-06"},{"v":7.13e-05,"d":"7.13E-05"},"fumarylacetoacetase. Encodes a fumarylacetoacetase that converts fumarylacetoacetate to acetoacetate and fumarate and is likely to be involved in tyrosine catabolism.","AT1G26580",null,750.9,-0.65125,0.15398,-4.2295,{"v":2.34E-5,"d":"2.34E-05"},{"v":0.000236,"d":"2.36E-04"},"ELM2 domain protein."]
["AT1G22930",null,1780,-0.51422,0.097033,-5.2995,{"v":1.16e-07,"d":"1.16E-07"},{"v":1.2e-06,"d":"1.20E-06"},"T-complex protein 11.","AT1G53750","RPT1A",2466,-0.45531,0.10132,-4.4936,{"v":7e-06,"d":"7.00E-06"},{"v":7.2e-05,"d":"7.20E-05"},"full_name=regulatory particle triple-A 1A. regulatory particle triple-A 1A. 26S proteasome AAA-ATPase subunit RPT1a (RPT1a) mRNA,","AT2G09990",null,986.78,-0.61984,0.14659,-4.2283,{"v":2.35e-05,"d":"2.35E-05"},{"v":0.000237,"d":"2.37E-04"},"Ribosomal protein S5 domain 2-like superfamily protein."]
["AT4G39660","AGT2",934.76,-0.71535,0.1352,-5.2909,{"v":1.22e-07,"d":"1.22E-07"},{"v":1.25e-06,"d":"1.25E-06"},"full_name=alanine:glyoxylate aminotransferase 2. alanine:glyoxylate aminotransferase 2. alanine:glyoxylate aminotransferase 2 homolog (AGT2) mRNA,","AT3G30842","ABCG38",52.62,-3.0609,0.6814,-4.4921,{"v":7.05e-06,"d":"7.05E-06"},{"v":7.22e-05,"d":"7.22E-05"},"full_name=ATP-binding cassette G38. pleiotropic drug resistance 10.","AT1G75190",null,130.04,-1.4277,0.33792,-4.2249,{"v":2.39e-05,"d":"2.39E-05"},{"v":0.00024,"d":"2.40E-04"},"hypothetical protein."]
["AT1G06410","TPS7",1385.1,-0.59228,0.112,-5.2881,{"v":1.24E-7,"d":"1.24E-07"},{"v":1.27e-06,"d":"1.27E-06"},"full_name=trehalose-phosphatase/synthase 7. trehalose-phosphatase/synthase 7. Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants.","AT3G45300","IVD",416.62,-0.774,0.17232,-4.4918,{"v":7.06e-06,"d":"7.06E-06"},{"v":7.23e-05,"d":"7.23E-05"},"full_name=isovaleryl-CoA-dehydrogenase. isovaleryl-CoA-dehydrogenase. Encodes isovaleryl-coenzyme a dehydrogenase. Mutants have increases in 12 seed free amino acids, accumulation of seed homomethionine and 3-isovaleroyloxypropyl-glucosinolate, with a concomitant decrease in seed 3-benzoyloxypropyl-glucosinolate.","AT3G53990","ATUSP",1702.4,0.82694,0.19575,4.2245,{"v":2.4e-05,"d":"2.40E-05"},{"v":0.00024,"d":"2.40E-04"},"Adenine nucleotide alpha hydrolases-like superfamily protein."]
["AT1G79850","RPS17",1562.8,0.66198,0.12526,5.2846,{"v":1.26e-07,"d":"1.26E-07"},{"v":1.29e-06,"d":"1.29E-06"},"full_name=ribosomal protein S17. ribosomal protein S17. nuclear-encoded 30S chloroplast ribosomal protein S17","AT2G43580",null,17.728,-7.1657,1.5993,-4.4806,{"v":7.44e-06,"d":"7.44E-06"},{"v":7.6e-05,"d":"7.60E-05"},"Chitinase family protein.","AT3G03900","APK3",129.12,1.2892,0.30561,4.2185,{"v":2.46e-05,"d":"2.46E-05"},{"v":0.000246,"d":"2.46E-04"},"full_name=adenosine-5'-phosphosulfate (APS) kinase 3. adenosine-5'-phosphosulfate (APS) kinase 3. Provides activated sulfate for the sulfation of secondary metabolites, including the glucosinolates. Redundant with APK4."]
["AT3G48990","AAE3",14018,0.63305,0.11993,5.2786,{"v":1.3E-7,"d":"1.30E-07"},{"v":1.33E-6,"d":"1.33E-06"},"full_name=ACYL-ACTIVATING ENZYME 3. AMP-dependent synthetase and ligase family protein. Encodes an oxalyl-CoA synthetase and is required for oxalate degradation, for normal seed development, and for defense against an oxalate-producing fungal pathogen.","AT1G17745","PGDH",95.068,1.606,0.35867,4.4777,{"v":7.54e-06,"d":"7.54E-06"},{"v":7.69e-05,"d":"7.69E-05"},"full_name=3-phosphoglycerate dehydrogenase. D-3-phosphoglycerate dehydrogenase. encodes a 3-Phosphoglycerate dehydrogenase","AT4G24840","COG2",463.54,0.73539,0.17445,4.2155,{"v":2.49e-05,"d":"2.49E-05"},{"v":0.000249,"d":"2.49E-04"},"oligomeric golgi complex subunit-like protein."]
["AT2G41990","CC3",72.332,-2.0261,0.38422,-5.2733,{"v":1.34e-07,"d":"1.34E-07"},{"v":1.37E-6,"d":"1.37E-06"},"late embryogenesis abundant protein.","AT1G26180",null,231.87,0.97897,0.21877,4.4748,{"v":7.65e-06,"d":"7.65E-06"},{"v":7.78e-05,"d":"7.78E-05"},"membrane protein.","AT2G47110","UBQ6",2778.7,-0.68647,0.1631,-4.209,{"v":2.57e-05,"d":"2.57E-05"},{"v":0.000256,"d":"2.56E-04"},"full_name=ubiquitin 6. ubiquitin 6. polyubiquitin gene"]
["AT4G31890",null,226.76,-1.2184,0.23115,-5.2711,{"v":1.36E-7,"d":"1.36E-07"},{"v":1.38e-06,"d":"1.38E-06"},"ARM repeat superfamily protein.","AT3G22235","ATHCYSTM8",42.954,2.3041,0.51507,4.4733,{"v":7.7e-06,"d":"7.70E-06"},{"v":7.82e-05,"d":"7.82E-05"},"cysteine-rich TM module stress tolerance protein.","AT3G47470","LHCA4",5087.4,0.8951,0.21284,4.2055,{"v":2.61e-05,"d":"2.61E-05"},{"v":0.000259,"d":"2.59E-04"},"full_name=light-harvesting chlorophyll-protein complex I subunit A4. light-harvesting chlorophyll-protein complex I subunit A4. Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins."]
["AT5G15700",null,422.04,0.87991,0.16703,5.2678,{"v":1.38e-07,"d":"1.38E-07"},{"v":1.41e-06,"d":"1.41E-06"},"DNA/RNA polymerases superfamily protein. Nucleus encoded plastid RNA polymerase. Localized in mitochondria and chloroplast.","AT3G03130",null,30.665,2.7834,0.62243,4.4719,{"v":7.75e-06,"d":"7.75E-06"},{"v":7.86E-5,"d":"7.86E-05"},"lisH domain-like protein.","AT4G18910","NIP1;2",111.7,1.4033,0.33369,4.2052,{"v":2.61e-05,"d":"2.61E-05"},{"v":0.000259,"d":"2.59E-04"},"full_name=NOD26-like intrinsic protein 1;2. NOD26-like intrinsic protein 1;2. Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells."]
["AT2G45160","HAM1",544.07,-0.81921,0.15564,-5.2635,{"v":1.41e-07,"d":"1.41E-07"},{"v":1.44E-6,"d":"1.44E-06"},"full_name=HAIRY MERISTEM 1. GRAS family transcription factor. Belongs to one of the LOM (LOST MERISTEMS) genes: AT2G45160 (LOM1), AT3G60630 (LOM2) and AT4G00150 (LOM3). LOM1 and LOM2 promote cell differentiation at the periphery of shoot meristems and help to maintain their polar organization.","AT1G03310","DBE1",1127.8,-0.53906,0.12066,-4.4674,{"v":7.92e-06,"d":"7.92E-06"},{"v":8.02e-05,"d":"8.02E-05"},"full_name=debranching enzyme 1. debranching enzyme 1. Encodes a protein with strong similarity to isoamylase (EC:3.2.1.68) however lacks critical residues known to be important for activity. Appears to co localize with ISA1 in the chloroplast isoamylase complex. Mutations in this gene cause the loss of detectable isoamylase activity and the disruption of normal starch structure. It has been postulated that AtISA2 interacts with AtISA1 to form the Iso1 complex.","AT1G35190",null,231.93,0.99617,0.23697,4.2038,{"v":2.63e-05,"d":"2.63E-05"},{"v":0.00026,"d":"2.60E-04"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein."]
["AT2G32970",null,765.36,-0.66144,0.12568,-5.2627,{"v":1.42E-7,"d":"1.42E-07"},{"v":1.44E-6,"d":"1.44E-06"},"G1/S-specific cyclin-E protein.","AT5G61510",null,634.69,-0.66157,0.14825,-4.4624,{"v":8.11e-06,"d":"8.11E-06"},{"v":8.19e-05,"d":"8.19E-05"},"GroES-like zinc-binding alcohol dehydrogenase family protein.","AT3G03790",null,614.17,0.71564,0.17031,4.2019,{"v":2.65E-5,"d":"2.65E-05"},{"v":0.000262,"d":"2.62E-04"},"ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein."]
["AT3G28130","UMAMIT44",158.67,1.4865,0.28261,5.2599,{"v":1.44e-07,"d":"1.44E-07"},{"v":1.46E-6,"d":"1.46E-06"},"full_name=Usually multiple acids move in and out Transporters 44. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT2G47170","ARF1A1C",1618.1,0.54912,0.12315,4.4591,{"v":8.23e-06,"d":"8.23E-06"},{"v":8.31e-05,"d":"8.31E-05"},"Ras-related small GTP-binding family protein. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. Members of this family are known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.","AT2G32070","CAF1K",341.06,-0.8185,0.19496,-4.1984,{"v":2.69E-5,"d":"2.69E-05"},{"v":0.000266,"d":"2.66E-04"},"Polynucleotidyl transferase, ribonuclease H-like superfamily protein."]
["AT5G40650","SDH2-2",310.95,0.9749,0.18582,5.2464,{"v":1.55E-7,"d":"1.55E-07"},{"v":1.57E-6,"d":"1.57E-06"},"full_name=succinate dehydrogenase 2-2. succinate dehydrogenase 2-2. One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth.","AT3G08880","MUN",98.104,1.3672,0.30708,4.4521,{"v":8.5e-06,"d":"8.50E-06"},{"v":8.56e-05,"d":"8.56E-05"},"plectin-like protein.","AT1G05380",null,421.55,0.8244,0.19661,4.1931,{"v":2.75e-05,"d":"2.75E-05"},{"v":0.000271,"d":"2.71E-04"},"Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein."]
["AT3G14362","RTFL10",137.76,1.5665,0.29878,5.2429,{"v":1.58e-07,"d":"1.58E-07"},{"v":1.59E-6,"d":"1.59E-06"},"full_name=ROTUNDIFOLIA like 10. ROTUNDIFOLIA like 10.","AT3G47860","CHL",424.56,0.75486,0.16988,4.4435,{"v":8.85E-6,"d":"8.85E-06"},{"v":8.89e-05,"d":"8.89E-05"},"full_name=chloroplastic lipocalin. chloroplastic lipocalin. Encodes a chloroplastic lipocalin AtCHL. Located in thylakoid lumen. Involved in the protection of thylakoidal membrane lipids against reactive oxygen species, especially singlet oxygen, produced upon excess light.","AT5G50810","TIM8",222.07,-1.1747,0.2805,-4.188,{"v":2.81e-05,"d":"2.81E-05"},{"v":0.000277,"d":"2.77E-04"},"full_name=translocase inner membrane subunit 8. translocase inner membrane subunit 8. Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus."]
["AT5G55400","ATFIM4",614.46,0.92318,0.17617,5.2403,{"v":1.6E-7,"d":"1.60E-07"},{"v":1.61E-6,"d":"1.61E-06"},"Actin binding Calponin homology (CH) domain-containing protein.","AT4G10265","WIP3",604.39,-0.7297,0.16437,-4.4395,{"v":9.02E-6,"d":"9.02E-06"},{"v":9.04e-05,"d":"9.04E-05"},"Wound-responsive family protein.","AT1G28960","NUDX15",287.92,0.86644,0.20737,4.1783,{"v":2.94E-5,"d":"2.94E-05"},{"v":0.000289,"d":"2.89E-04"},"full_name=nudix hydrolase homolog 15. nudix hydrolase homolog 15. Encodes a ppGpp pyrophosphohydrolase."]
["AT5G58900","DIV1",98.304,1.6735,0.3194,5.2397,{"v":1.61E-7,"d":"1.61E-07"},{"v":1.62e-06,"d":"1.62E-06"},"Homeodomain-like transcriptional regulator.","AT1G61260",null,121.24,1.2425,0.27992,4.4387,{"v":9.05e-06,"d":"9.05E-06"},{"v":9.06e-05,"d":"9.06E-05"},"cotton fiber (DUF761).","AT3G21790",null,540.97,0.77477,0.18547,4.1773,{"v":2.95e-05,"d":"2.95E-05"},{"v":2.9E-4,"d":"2.90E-04"},"UDP-Glycosyltransferase superfamily protein."]
["AT4G00370","ANTR2",585.57,0.79616,0.15214,5.2331,{"v":1.67E-7,"d":"1.67E-07"},{"v":1.67e-06,"d":"1.67E-06"},"Major facilitator superfamily protein. Encodes an inorganic phosphate transporter (PHT4;4) that can transport ascorbate and is located in the chloroplast envelope membrane. It has been shown to play a role in the xanthophyll cycle during photosynthesis and may be required for tolerance to strong light stress.","AT3G15730","PLDALPHA1",4178.9,0.48668,0.1097,4.4366,{"v":9.14e-06,"d":"9.14E-06"},{"v":9.13e-05,"d":"9.13E-05"},"full_name=phospholipase D alpha 1. phospholipase D alpha 1. Encodes phospholipase D alpha 1 (PLD alpha 1). Positive regulator of abscisic acid (ABA) mediated stomatal movements. PLD alpha 1 plays an important role in seed deterioration and aging in Arabidopsis.","AT3G03960",null,863.52,-0.6176,0.14798,-4.1734,{"v":3e-05,"d":"3.00E-05"},{"v":0.000294,"d":"2.94E-04"},"TCP-1/cpn60 chaperonin family protein."]
["AT5G54470","BBX29",99.095,-1.986,0.37957,-5.2322,{"v":1.67E-7,"d":"1.67E-07"},{"v":1.68E-6,"d":"1.68E-06"},"full_name=B-box domain protein 29. B-box type zinc finger family protein.","AT5G06460","UBA 2",694.28,-0.62202,0.14031,-4.4331,{"v":9.29e-06,"d":"9.29E-06"},{"v":9.26e-05,"d":"9.26E-05"},"full_name=ubiquitin activating enzyme 2. ubiquitin activating enzyme 2. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined.","AT2G03140",null,638.7,0.71119,0.17045,4.1725,{"v":3.01E-5,"d":"3.01E-05"},{"v":0.000294,"d":"2.94E-04"},"alpha/beta-Hydrolases superfamily protein."]
["AT5G14320","EMB3137",2026.5,0.49744,0.09509,5.2312,{"v":1.68E-7,"d":"1.68E-07"},{"v":1.68E-6,"d":"1.68E-06"},"full_name=EMBRYO DEFECTIVE 3137. Ribosomal protein S13/S18 family.","AT5G13740","ZIF1",492.74,-0.72415,0.16336,-4.4328,{"v":9.3e-06,"d":"9.30E-06"},{"v":9.26e-05,"d":"9.26E-05"},"full_name=zinc induced facilitator 1. zinc induced facilitator 1. Encodes ZIF1 (ZINC-INDUCED FACILITATOR1), a member of the Major Facilitator Superfamily (MFS) of membrane proteins which are found in all organisms and transport a wide range of small, organic molecules. Involved in a mechanism of Zn sequestration, possibly by transport of a Zn ligand or Zn-ligand complex into vacuoles.","AT2G20940",null,69.163,-1.657,0.3972,-4.1718,{"v":3.02e-05,"d":"3.02E-05"},{"v":0.000295,"d":"2.95E-04"},"transmembrane protein, putative (DUF1279)."]
["AT4G31120","SKB1",903.12,0.6217,0.11889,5.2294,{"v":1.7e-07,"d":"1.70E-07"},{"v":1.7E-6,"d":"1.70E-06"},"full_name=SHK1 binding protein 1. SHK1 binding protein 1. Involved in vernalization. Required for epigenetic silencing of FLC, and for vernalization-mediated histone modification.","AT5G05140",null,296.72,-0.91095,0.20573,-4.4279,{"v":9.52e-06,"d":"9.52E-06"},{"v":9.46e-05,"d":"9.46E-05"},"Transcription elongation factor (TFIIS) family protein.","AT2G45380",null,542.77,0.77733,0.18642,4.1699,{"v":3.05e-05,"d":"3.05E-05"},{"v":0.000297,"d":"2.97E-04"},"myeloid leukemia factor."]
["AT4G27990","YLMG1-2",502.47,-0.81362,0.1557,-5.2255,{"v":1.74E-7,"d":"1.74E-07"},{"v":1.73E-6,"d":"1.73E-06"},"YGGT family protein.","AT2G25770",null,62.722,-2.168,0.49033,-4.4216,{"v":9.8e-06,"d":"9.80E-06"},{"v":9.71e-05,"d":"9.71E-05"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein.","AT5G48870","SAD1",182.41,-1.0381,0.24913,-4.1669,{"v":3.09e-05,"d":"3.09E-05"},{"v":0.0003,"d":"3.00E-04"},"full_name=SUPERSENSITIVE TO ABA AND DROUGHT 1. Small nuclear ribonucleoprotein family protein. SAD1 encodes a polypeptide similar to multifunctional Sm-like snRNP proteins that are required for mRNA splicing, export, and degradation. Mutation in this gene increases plant sensitivity to drought stress and ABA in seed germination, root growth, and the expression of some stress-responsive genes."]
["AT5G39210","CRR7",127.41,1.5154,0.29004,5.2248,{"v":1.74E-7,"d":"1.74E-07"},{"v":1.73E-6,"d":"1.73E-06"},"full_name=CHLORORESPIRATORY REDUCTION 7. chlororespiratory reduction 7. Encodes a protein of the chloroplastic NAD(P)H dehydrogenase complex (NDH Complex) involved in respiration, photosystem I (PSI) cyclic electron transport and CO2 uptake. The product of this gene appears to be essential for the stable formation of the NDH Complex.","AT4G39260","CCR1",2038.3,-0.63129,0.14291,-4.4175,{"v":9.98e-06,"d":"9.98E-06"},{"v":9.88e-05,"d":"9.88E-05"},"full_name=cold, circadian rhythm, and RNA binding 1. cold, circadian rhythm, and RNA binding 1. Encodes a glycine-rich protein with RNA binding domain at the N-terminus. Protein is structurally similar to proteins induced by stress in other plants. Gene expression is induced by cold. Transcript undergoes circadian oscillations that is depressed by overexpression of AtGRP7. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).","AT3G16780","RPL19B",905.68,-0.82191,0.19747,-4.1623,{"v":3.15E-5,"d":"3.15E-05"},{"v":0.000306,"d":"3.06E-04"},"Ribosomal protein L19e family protein."]
["AT4G38210","EXPA20",633.93,0.82269,0.15768,5.2173,{"v":1.82e-07,"d":"1.82E-07"},{"v":1.8e-06,"d":"1.80E-06"},"full_name=expansin A20. expansin A20. expansin -like protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","AT4G16563",null,29.228,-3.1405,0.71124,-4.4156,{"v":1.01E-5,"d":"1.01E-05"},{"v":9.95e-05,"d":"9.95E-05"},"Eukaryotic aspartyl protease family protein.","AT5G66110","HIPP27",30.601,2.5333,0.60934,4.1573,{"v":3.22e-05,"d":"3.22E-05"},{"v":0.000312,"d":"3.12E-04"},"full_name=heavy metal associated isoprenylated plant protein 27. Heavy metal transport/detoxification superfamily protein."]
["AT2G37130",null,31.259,-4.7088,0.90288,-5.2153,{"v":1.84e-07,"d":"1.84E-07"},{"v":1.82e-06,"d":"1.82E-06"},"Peroxidase superfamily protein.","AT5G03660",null,881.95,-0.67074,0.15201,-4.4125,{"v":1.02e-05,"d":"1.02E-05"},{"v":1.01E-4,"d":"1.01E-04"},"transcriptional activator (DUF662).","AT3G03440",null,84.415,1.5437,0.37136,4.1569,{"v":3.23e-05,"d":"3.23E-05"},{"v":0.000312,"d":"3.12E-04"},"ARM repeat superfamily protein."]
["AT4G30960","SIP3",5606.7,-0.42785,0.082134,-5.2092,{"v":1.9e-07,"d":"1.90E-07"},{"v":1.87e-06,"d":"1.87E-06"},"full_name=SOS3-interacting protein 3. SOS3-interacting protein 3. Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance.","AT3G10450","SCPL7",320.47,-0.84467,0.19159,-4.4088,{"v":1.04E-5,"d":"1.04E-05"},{"v":1.02E-4,"d":"1.02E-04"},"full_name=serine carboxypeptidase-like 7. serine carboxypeptidase-like 7.","AT4G17520","HLN",1771.3,-0.70046,0.16871,-4.1517,{"v":3.3e-05,"d":"3.30E-05"},{"v":0.000318,"d":"3.18E-04"},"Hyaluronan / mRNA binding family."]
["AT1G58684",null,2956.9,0.47221,0.090692,5.2067,{"v":1.92E-7,"d":"1.92E-07"},{"v":1.9E-6,"d":"1.90E-06"},"Ribosomal protein S5 family protein.","AT5G42060",null,305.65,-0.87272,0.19828,-4.4015,{"v":1.07e-05,"d":"1.07E-05"},{"v":1.06E-4,"d":"1.06E-04"},"DEK, chromatin associated protein.","AT5G45950",null,57.683,-1.8211,0.43869,-4.1511,{"v":3.31e-05,"d":"3.31E-05"},{"v":3.19E-4,"d":"3.19E-04"},"GDSL-like Lipase/Acylhydrolase superfamily protein."]
["AT5G63960","GIS5",301.4,1.0252,0.19709,5.2018,{"v":1.97E-7,"d":"1.97E-07"},{"v":1.94e-06,"d":"1.94E-06"},"DNA polymerase delta subunit 1.","AT5G05010",null,1521.4,0.53154,0.12078,4.4009,{"v":1.08E-5,"d":"1.08E-05"},{"v":1.06E-4,"d":"1.06E-04"},"clathrin adaptor complexes medium subunit family protein.","AT1G14390",null,35.544,-2.7198,0.65533,-4.1503,{"v":3.32e-05,"d":"3.32E-05"},{"v":3.19E-4,"d":"3.19E-04"},"Leucine-rich repeat protein kinase family protein."]
["AT1G67840","CSK",202.42,1.2694,0.24415,5.1993,{"v":2e-07,"d":"2.00E-07"},{"v":1.97e-06,"d":"1.97E-06"},"full_name=chloroplast sensor kinase. chloroplast sensor kinase. Encodes a chloroplast sensor kinase (CSK) that shares common ancestors with cyanobacterial histidine sensor kinases. CSK is synthesised in the cytosol and imported into the chloroplast as a protein precusor. CSK is autophosphorylated and required for control of transcription of chloroplast genes by the redox state of an electron carrier connecting photosystems I and II.","AT2G46660","CYP78A6",102.99,-1.4713,0.3345,-4.3984,{"v":1.09e-05,"d":"1.09E-05"},{"v":1.07E-4,"d":"1.07E-04"},"full_name=cytochrome P450, family 78, subfamily A, polypeptide 6. cytochrome P450, family 78, subfamily A, polypeptide 6. Encodes a member of CYP78A cytochrome P450 monooxygenase protein family that is required in the sporophytic tissue of the mother plant to promote seed growth.","AT5G46250","LARP6a",530.19,0.75228,0.18142,4.1466,{"v":3.37e-05,"d":"3.37E-05"},{"v":0.000324,"d":"3.24E-04"},"full_name=La related protein 6a. RNA-binding protein."]
["AT5G62000","ARF2",2882.6,-0.52499,0.10101,-5.1972,{"v":2.02e-07,"d":"2.02E-07"},{"v":1.99E-6,"d":"1.99E-06"},"full_name=auxin response factor 2. auxin response factor 2. Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation.","AT1G68510","LBD42",16.481,-7.0589,1.6066,-4.3938,{"v":1.11E-5,"d":"1.11E-05"},{"v":0.000109,"d":"1.09E-04"},"full_name=LOB domain-containing protein 42. LOB domain-containing protein 42.","AT5G06630","EXT9",25.539,3.5399,0.85434,4.1434,{"v":3.42e-05,"d":"3.42E-05"},{"v":3.28E-4,"d":"3.28E-04"},"proline-rich extensin-like family protein."]
["AT1G22430",null,478.97,-0.82526,0.15884,-5.1954,{"v":2.04E-7,"d":"2.04E-07"},{"v":2e-06,"d":"2.00E-06"},"GroES-like zinc-binding dehydrogenase family protein.","AT2G16070","PDV2",335.93,-0.82583,0.18814,-4.3895,{"v":1.14e-05,"d":"1.14E-05"},{"v":1.11E-4,"d":"1.11E-04"},"full_name=PLASTID DIVISION2. plastid division2. An integral outer envelope membrane protein (its homolog in A thaliana PDV1), component of the plastid division machinery. Similar to ARC6, PDV2 localizes to a continuous ring at the division site in wild-type plants. PDV1 and PDV2 are required for localization of ARC5 at the chloroplast division site.","AT2G34380","SEIPIN3",90.727,1.4064,0.33977,4.1393,{"v":3.48e-05,"d":"3.48E-05"},{"v":0.000333,"d":"3.33E-04"},"Putative adipose-regulatory protein (Seipin)."]
["AT1G54570","PES1",1201.9,0.57092,0.10995,5.1924,{"v":2.08e-07,"d":"2.08E-07"},{"v":2.03E-6,"d":"2.03E-06"},"full_name=phytyl ester synthase 1. Esterase/lipase/thioesterase family protein. Encodes a protein with phytyl ester synthesis and diacylglycerol acyltransferase activities that is involved in the deposition of free phytol and free fatty acids in the form of phytyl esters in chloroplasts, a process involved in maintaining the integrity of the photosynthetic membrane during abiotic stress and senescence.","AT5G01800",null,302.39,0.83219,0.18998,4.3804,{"v":1.18e-05,"d":"1.18E-05"},{"v":1.15E-4,"d":"1.15E-04"},"saposin B domain-containing protein.","AT3G06435",null,119.98,-1.7558,0.42482,-4.1329,{"v":3.58e-05,"d":"3.58E-05"},{"v":0.000342,"d":"3.42E-04"},"Expressed protein."]
["AT5G19190",null,50.717,2.6549,0.51155,5.19,{"v":2.1E-7,"d":"2.10E-07"},{"v":2.05e-06,"d":"2.05E-06"},"hypothetical protein.","AT3G09950",null,22.707,-4.4483,1.0169,-4.3745,{"v":1.22E-5,"d":"1.22E-05"},{"v":1.18E-4,"d":"1.18E-04"},"hypothetical protein.","AT5G14240",null,586.42,0.71581,0.17327,4.1311,{"v":3.61e-05,"d":"3.61E-05"},{"v":0.000344,"d":"3.44E-04"},"Thioredoxin superfamily protein."]
["AT4G02400",null,1141.2,0.57751,0.11132,5.188,{"v":2.13e-07,"d":"2.13E-07"},{"v":2.07e-06,"d":"2.07E-06"},"U3 ribonucleoprotein (Utp) family protein.","AT3G10420","SPD1",460.31,-0.85069,0.19455,-4.3727,{"v":1.23e-05,"d":"1.23E-05"},{"v":0.000119,"d":"1.19E-04"},"full_name=SEEDLING PLASTID DEVELOPMENT 1. P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT4G21323",null,50.491,2.1009,0.50867,4.1303,{"v":3.62e-05,"d":"3.62E-05"},{"v":0.000345,"d":"3.45E-04"},"Subtilase family protein."]
["AT3G28220",null,1114.2,-0.76596,0.14765,-5.1876,{"v":2.13e-07,"d":"2.13E-07"},{"v":2.07e-06,"d":"2.07E-06"},"TRAF-like family protein.","AT5G62170","TRM25",89.674,1.4107,0.32293,4.3684,{"v":1.25e-05,"d":"1.25E-05"},{"v":1.21E-4,"d":"1.21E-04"},"full_name=TON1 Recruiting Motif 25. LOW protein: M-phase inducer phosphatase-like protein.","AT3G22460","OASA2",11.623,6.9652,1.6872,4.1283,{"v":3.66e-05,"d":"3.66E-05"},{"v":0.000347,"d":"3.47E-04"},"full_name=O-acetylserine (thiol) lyase (OAS-TL) isoform A2. O-acetylserine (thiol) lyase (OAS-TL) isoform A2. Encodes a member of a family of genes with O-acetylserine(thiol)lyase activity."]
["AT3G10530",null,683.41,0.80381,0.1551,5.1826,{"v":2.19e-07,"d":"2.19E-07"},{"v":2.12E-6,"d":"2.12E-06"},"Transducin/WD40 repeat-like superfamily protein.","AT2G44660",null,132.87,1.1674,0.2676,4.3625,{"v":1.29E-5,"d":"1.29E-05"},{"v":0.000124,"d":"1.24E-04"},"ALG6, ALG8 glycosyltransferase family.","AT4G36730","GBF1",337.97,0.86721,0.21035,4.1228,{"v":3.74e-05,"d":"3.74E-05"},{"v":0.000354,"d":"3.54E-04"},"full_name=G-box binding factor 1. G-box binding factor 1. member of a gene family encoding basic leucine zipper proteins (GBFs) which bind the G-box"]
["AT3G18010","WOX1",34.735,-3.1252,0.60319,-5.1812,{"v":2.2e-07,"d":"2.20E-07"},{"v":2.14e-06,"d":"2.14E-06"},"full_name=WUSCHEL related homeobox 1. WUSCHEL related homeobox 1. Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. Its mRNA is expressed in the initiating vascular primordium of the cotyledons during heart and torpedo stages.","AT4G10260","FRK4",42.842,-2.5573,0.58646,-4.3606,{"v":1.3e-05,"d":"1.30E-05"},{"v":1.25E-4,"d":"1.25E-04"},"pfkB-like carbohydrate kinase family protein.","AT1G27050",null,48.733,-1.9176,0.46538,-4.1206,{"v":3.78e-05,"d":"3.78E-05"},{"v":0.000358,"d":"3.58E-04"},"homeobox leucine zipper protein. Encodes a protein with a RNA recognition motif. Previously annotated as ATHB54, a homeodomain leucine zipper (HD-Zip) family protein. In the TAIR10 genome release (2010), this locus was split into two loci: AT1G27045 (containing homeodomain and leucine zipper domains) and AT1G27050 (containing a RNA recognition motif). AT1G27045 is now named ATHB54. Note that Affymetrix ATH1 Probe Set linked to symbol ATHB54 is in fact directed against the product of the AT1G27050 locus (the mRNA coding for the RNA-recognition-motif protein)."]
["AT2G37770","ChlAKR",616.31,-0.82168,0.1587,-5.1777,{"v":2.25e-07,"d":"2.25E-07"},{"v":2.17E-6,"d":"2.17E-06"},"full_name=Chloroplastic aldo-keto reductase. NAD(P)-linked oxidoreductase superfamily protein. Encodes an NADPH-dependent aldo-keto reductase that can act on a wide variety of substrates in vitro including saturated and unsaturated aldehydes, steroids, and sugars. GFP-tagged AKR4C9 localizes to the chloroplast where it may play a role in detoxifying reactive carbonyl compounds that threaten to impair the photosynthetic process. Transcript levels for this gene are up-regulated in response to cold, salt, and drought stress.","AT3G21055","PSBTN",1063.7,0.80402,0.18448,4.3583,{"v":1.31E-5,"d":"1.31E-05"},{"v":1.26E-4,"d":"1.26E-04"},"full_name=photosystem II subunit T. photosystem II subunit T. Encodes photosystem II 5 kD protein subunit PSII-T. This is a nuclear-encoded gene (PsbTn) which also has a plastid-encoded paralog (PsbTc).","AT4G24960","HVA22D",235.41,0.93511,0.22724,4.1152,{"v":3.87e-05,"d":"3.87E-05"},{"v":0.000365,"d":"3.65E-04"},"full_name=HVA22 homologue D. HVA22 homologue D. Homologous to a eukaryote specific ABA- and stress-inducible gene first isolated from barley. Groups in one subfamily with ATHVA22E. Along with other members of the ATHVA22 family, it may be involved in regulation of autophagy during development."]
["AT4G02060","PRL",303.3,1.1338,0.21915,5.1736,{"v":2.3e-07,"d":"2.30E-07"},{"v":2.22e-06,"d":"2.22E-06"},"full_name=PROLIFERA. Minichromosome maintenance (MCM2/3/5) family protein. Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.","AT3G06510","SFR2",659.78,-0.64668,0.14842,-4.357,{"v":1.32e-05,"d":"1.32E-05"},{"v":1.27E-4,"d":"1.27E-04"},"full_name=SENSITIVE TO FREEZING 2. Glycosyl hydrolase superfamily protein. Encodes a protein with beta-glucosidase and galactosyltransferase activity, mutants show increased sensitivity to freezing. Though it is classified as a family I glycosyl hydrolase, it has no hydrolase activity in vitro.","AT3G10030",null,319.4,0.8276,0.20121,4.1131,{"v":3.9e-05,"d":"3.90E-05"},{"v":3.68E-4,"d":"3.68E-04"},"aspartate/glutamate/uridylate kinase family protein."]
["AT2G23930","SNRNP-G",1028.5,0.6068,0.11738,5.1694,{"v":2.35E-7,"d":"2.35E-07"},{"v":2.26E-6,"d":"2.26E-06"},"full_name=probable small nuclear ribonucleoprotein G. Putative small nuclear ribonucleoprotein G.","AT2G21270","UFD1",782.35,-0.58786,0.13507,-4.3524,{"v":1.35e-05,"d":"1.35E-05"},{"v":0.000129,"d":"1.29E-04"},"full_name=ubiquitin fusion degradation 1. ubiquitin fusion degradation 1.","AT2G32180","PTAC18",210.44,-0.98072,0.2388,-4.1069,{"v":4.01e-05,"d":"4.01E-05"},{"v":3.77E-4,"d":"3.77E-04"},"full_name=plastid transcriptionally active 18. plastid transcriptionally active 18."]
["AT1G77100",null,271.82,-0.99331,0.19241,-5.1624,{"v":2.44e-07,"d":"2.44E-07"},{"v":2.34E-6,"d":"2.34E-06"},"peroxidase superfamily protein.","AT1G20840","TMT1",478.36,0.6727,0.15482,4.3449,{"v":1.39e-05,"d":"1.39E-05"},{"v":0.000133,"d":"1.33E-04"},"full_name=tonoplast monosaccharide transporter1. tonoplast monosaccharide transporter1. The protein encoded by this gene is found in the tonoplast (vacuole membrane) of Arabidopsis cells. The gene is expressed at highest levels in juvenile (sink) and adult (source) leaves, followed by flower tissues.","AT4G31985",null,977.09,-0.61551,0.15013,-4.0999,{"v":4.13e-05,"d":"4.13E-05"},{"v":3.88E-4,"d":"3.88E-04"},"Ribosomal protein L39 family protein."]
["AT5G10010","HIT4",816.72,0.6715,0.13008,5.162,{"v":2.44e-07,"d":"2.44E-07"},{"v":2.35e-06,"d":"2.35E-06"},"myosin-H heavy protein.","AT5G37500","GORK",106.31,1.2905,0.29713,4.3434,{"v":1.4E-5,"d":"1.40E-05"},{"v":1.34E-4,"d":"1.34E-04"},"full_name=gated outwardly-rectifying K+ channel. gated outwardly-rectifying K+ channel. Encodes a guard cell outward potassium channel. Belongs to the Shaker family K+ channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mutants have increased water consumption and limited stomatal closure in response to abscisic and jasmonic acids. It forms a heteromeric K(out) channels with SKOR. The gene is expressed ubiquitously in root and the vasculature and guard cells of leaves. Expression is suppressed during agrobacterium-induced tumor formation and increased in response to water deprivation and cold.","AT3G05690","NF-YA2",68.016,-1.7208,0.41978,-4.0993,{"v":4.14e-05,"d":"4.14E-05"},{"v":0.000389,"d":"3.89E-04"},"full_name=nuclear factor Y, subunit A2. nuclear factor Y, subunit A2. Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues."]
["AT2G02740","WHY3",352.23,0.92581,0.17949,5.1581,{"v":2.5e-07,"d":"2.50E-07"},{"v":2.39E-6,"d":"2.39E-06"},"full_name=WHIRLY 3. ssDNA-binding transcriptional regulator. Encodes a homolog of the potato p24 protein. It shares the conserved KGKAAL domain, a putative DNA-binding domain, with potato p24 and is localized to the plastid and not the nucleus.","AT5G65660",null,328.14,-0.84692,0.19524,-4.338,{"v":1.44e-05,"d":"1.44E-05"},{"v":1.37E-4,"d":"1.37E-04"},"hydroxyproline-rich glycoprotein family protein.","AT1G10370","ERD9",102.23,1.3254,0.32347,4.0974,{"v":4.18E-5,"d":"4.18E-05"},{"v":0.000391,"d":"3.91E-04"},"full_name=EARLY-RESPONSIVE TO DEHYDRATION 9. Glutathione S-transferase family protein. Encodes GSTU17 (Glutathione S-Transferase U17). Functions as a negative component of stress-mediated signal transduction pathways in drought and salt stress responses."]
["AT1G30510","RFNR2",501.23,-0.77454,0.15042,-5.1491,{"v":2.62e-07,"d":"2.62E-07"},{"v":2.5e-06,"d":"2.50E-06"},"full_name=root FNR 2. root FNR 2. Encodes a root-type ferredoxin:NADP(H) oxidoreductase.","AT1G27340","LCR",356.74,0.74972,0.1732,4.3287,{"v":1.5E-5,"d":"1.50E-05"},{"v":0.000143,"d":"1.43E-04"},"full_name=LEAF CURLING RESPONSIVENESS. Galactose oxidase/kelch repeat superfamily protein. Encodes a putative F-box protein that is involved in the regulation of leaf morphology.","AT5G40740","2024-08-06",266.41,0.89229,0.21801,4.093,{"v":4.26e-05,"d":"4.26E-05"},{"v":0.000398,"d":"3.98E-04"},"full_name=augmin subunit 6. HAUS augmin-like complex subunit."]
["AT1G07985",null,1861.2,0.72588,0.14099,5.1486,{"v":2.62e-07,"d":"2.62E-07"},{"v":2.51e-06,"d":"2.51E-06"},"Expressed protein.","AT4G29780",null,108.03,-1.546,0.35725,-4.3275,{"v":1.51e-05,"d":"1.51E-05"},{"v":1.44E-4,"d":"1.44E-04"},"nuclease.","AT3G19290","ABF4",257.5,0.93994,0.22978,4.0905,{"v":4.3e-05,"d":"4.30E-05"},{"v":0.000401,"d":"4.01E-04"},"full_name=ABRE binding factor 4. ABRE binding factor 4. bZIP transcription factor with specificity for abscisic acid-responsive elements (ABRE). Mediate ABA-dependent stress responses."]
["AT3G04720","PR4",805.52,0.76076,0.14785,5.1454,{"v":2.67E-7,"d":"2.67E-07"},{"v":2.55e-06,"d":"2.55E-06"},"full_name=pathogenesis-related 4. pathogenesis-related 4. Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection.","AT4G08520",null,537.05,0.63997,0.14794,4.3258,{"v":1.52E-5,"d":"1.52E-05"},{"v":1.44E-4,"d":"1.44E-04"},"SNARE-like superfamily protein.","AT5G35670","iqd33",33.596,-2.3584,0.57674,-4.0892,{"v":4.33e-05,"d":"4.33E-05"},{"v":0.000403,"d":"4.03E-04"},"full_name=IQ-domain 33. IQ-domain 33."]
["AT3G11964","RRP5",1597.1,0.64017,0.1245,5.1419,{"v":2.72E-7,"d":"2.72E-07"},{"v":2.59e-06,"d":"2.59E-06"},"RIBOSOMAL RNA PROCESSING 5. Encodes a nucleolar protein that is a ribosome biogenesis co-factor. Mutants display aberrant RNA processing and female gametophyte development.","AT2G42680","MBF1A",861.05,-0.74722,0.17285,-4.323,{"v":1.54e-05,"d":"1.54E-05"},{"v":1.46E-4,"d":"1.46E-04"},"full_name=multiprotein bridging factor 1A. multiprotein bridging factor 1A. One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated.","AT4G04830","MSRB5",202.18,-1.1709,0.28645,-4.0875,{"v":4.36e-05,"d":"4.36E-05"},{"v":0.000405,"d":"4.05E-04"},"full_name=methionine sulfoxide reductase B5. methionine sulfoxide reductase B5."]
["AT4G30880",null,55.544,-2.2528,0.43867,-5.1357,{"v":2.81e-07,"d":"2.81E-07"},{"v":2.67e-06,"d":"2.67E-06"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT1G18650","PDCB3",103.69,1.2938,0.29956,4.3191,{"v":1.57e-05,"d":"1.57E-05"},{"v":0.000148,"d":"1.48E-04"},"full_name=plasmodesmata callose-binding protein 3. plasmodesmata callose-binding protein 3. Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.","AT3G52630","RPA3A",54.199,-1.8052,0.442,-4.0841,{"v":4.42e-05,"d":"4.42E-05"},{"v":0.00041,"d":"4.10E-04"},"Nucleic acid-binding, OB-fold-like protein."]
["AT2G32080","PUR ALPHA-1",516.87,-0.76829,0.14962,-5.1349,{"v":2.82e-07,"d":"2.82E-07"},{"v":2.68e-06,"d":"2.68E-06"},"full_name=purin-rich alpha 1. purin-rich alpha 1. similar to the conserved animal nuclear protein PUR alpha which was implicated in the control of gene transcription and DNA replication","AT1G43640","TLP5",24.214,-3.464,0.80221,-4.318,{"v":1.57e-05,"d":"1.57E-05"},{"v":0.000149,"d":"1.49E-04"},"full_name=tubby like protein 5. tubby like protein 5. Member of TLP family","AT1G54740",null,43.615,2.0297,0.49704,4.0836,{"v":4.43e-05,"d":"4.43E-05"},{"v":0.000411,"d":"4.11E-04"},"FANTASTIC four-like protein (DUF3049)."]
["AT3G57610","ADSS",930.03,0.65985,0.12861,5.1306,{"v":2.89e-07,"d":"2.89E-07"},{"v":2.74E-6,"d":"2.74E-06"},"full_name=adenylosuccinate synthase. adenylosuccinate synthase. encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate)","AT2G44610","RAB6A",835.68,0.62498,0.14487,4.3142,{"v":1.6e-05,"d":"1.60E-05"},{"v":0.000151,"d":"1.51E-04"},"Ras-related small GTP-binding family protein. Encodes a GTP-binding protein with similarity to yeast YPT6 . RAB6 can complement the yeast YTP mutant.","AT3G63070","HULK3",411.26,0.79593,0.19498,4.0822,{"v":4.46E-5,"d":"4.46E-05"},{"v":0.000413,"d":"4.13E-04"},"Tudor/PWWP/MBT domain-containing protein. HUA and HUA-LIKE (HULK) genes act redundantly to regulate a subset of essential genes, with some (or all) family members also having specific functions."]
["AT1G28640",null,25.733,-4.6881,0.91615,-5.1172,{"v":3.1E-7,"d":"3.10E-07"},{"v":2.93e-06,"d":"2.93E-06"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT1G61520","LHCA3",2811.6,0.65177,0.15121,4.3103,{"v":1.63E-5,"d":"1.63E-05"},{"v":1.54E-4,"d":"1.54E-04"},"full_name=photosystem I light harvesting complex gene 3. PSI type III chlorophyll a/b-binding protein. PSI type III chlorophyll a/b-binding protein (Lhca3*1)","AT4G37040","MAP1D",155.72,-1.1153,0.27346,-4.0784,{"v":4.53e-05,"d":"4.53E-05"},{"v":0.000418,"d":"4.18E-04"},"full_name=methionine aminopeptidase 1D. methionine aminopeptidase 1D. encodes a methionine aminopeptidase"]
["AT3G02310","2024-09-02",158.84,-1.6444,0.32171,-5.1114,{"v":3.2e-07,"d":"3.20E-07"},{"v":3.02e-06,"d":"3.02E-06"},"full_name=SEPALLATA 2. K-box region and MADS-box transcription factor family protein. MADS-box protein, binds K domain of AG in vivo","AT4G35000","APX3",1430.1,0.56343,0.13073,4.3098,{"v":1.63E-5,"d":"1.63E-05"},{"v":1.54E-4,"d":"1.54E-04"},"full_name=ascorbate peroxidase 3. ascorbate peroxidase 3. Encodes a microsomal ascorbate peroxidase APX3. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. The APX3 protein interacts with AKR2 (ankyrin-containing protein that interacts with AFT1) and AFT1, a 14-3-3 protein.","AT5G50240","PIMT2",86.347,1.8244,0.44798,4.0725,{"v":4.65e-05,"d":"4.65E-05"},{"v":0.000429,"d":"4.29E-04"},"full_name=protein-l-isoaspartate methyltransferase 2. protein-l-isoaspartate methyltransferase 2. L-isoaspartyl methyltransferase 2 (PIMT2)gene, alternatively spliced."]
["AT4G12750",null,588.99,0.71853,0.1408,5.103,{"v":3.34E-7,"d":"3.34E-07"},{"v":3.15e-06,"d":"3.15E-06"},"Homeodomain-like transcriptional regulator.","AT1G21880","LYM1",850.67,-0.55918,0.12978,-4.3088,{"v":1.64e-05,"d":"1.64E-05"},{"v":1.54E-4,"d":"1.54E-04"},"full_name=lysm domain GPI-anchored protein 1 precursor. lysm domain GPI-anchored protein 1 precursor. Encodes a lysin-motif protein mediating bacterial peptidoglycan sensing and immunity to bacterial infection. Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant.","AT3G26290","CYP71B26",421.85,0.95733,0.23513,4.0716,{"v":4.67e-05,"d":"4.67E-05"},{"v":0.00043,"d":"4.30E-04"},"full_name=cytochrome P450, family 71, subfamily B, polypeptide 26. cytochrome P450, family 71, subfamily B, polypeptide 26. putative cytochrome P450"]
["AT4G32650","KAT3",105.22,1.6062,0.31528,5.0944,{"v":3.5e-07,"d":"3.50E-07"},{"v":3.29e-06,"d":"3.29E-06"},"full_name=potassium channel in Arabidopsis thaliana 3. potassium channel protein. Encodes KAT3, a member of the Shaker family of voltage-gated potassium channel subunits. Does not form functional potassium channel on its own. Involved in down-regulating AKT1 and KAT1 channel activity by forming heteromers with AKT1 or KAT1. The Shaker family K+ ion channels include five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inwardly rectifying conductance): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).","AT5G09550","GDI",16.319,-7.0407,1.6355,-4.3049,{"v":1.67e-05,"d":"1.67E-05"},{"v":0.000157,"d":"1.57E-04"},"full_name=RAB GDP-dissociation inhibitor. GDP dissociation inhibitor family protein / Rab GTPase activator family protein.","AT4G17770","TPS5",178.74,-1.0339,0.25426,-4.0663,{"v":4.78e-05,"d":"4.78E-05"},{"v":0.000439,"d":"4.39E-04"},"full_name=trehalose phosphatase/synthase 5. trehalose phosphatase/synthase 5. Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain. Phosphorylated TPS5 extracted from Arabidopsis cells binds directly to 14-3-3 isoforms."]
["AT2G40430","SMO4",1483.3,0.52683,0.10355,5.0878,{"v":3.62e-07,"d":"3.62E-07"},{"v":3.4e-06,"d":"3.40E-06"},"Nop53 protein.","AT2G28305","LOG1",60.521,1.7951,0.41736,4.3012,{"v":1.7E-5,"d":"1.70E-05"},{"v":0.000159,"d":"1.59E-04"},"full_name=LONELY GUY 1. Putative lysine decarboxylase family protein.","AT2G43120","PRN2",76.206,1.4906,0.36722,4.0591,{"v":4.93e-05,"d":"4.93E-05"},{"v":0.000451,"d":"4.51E-04"},"RmlC-like cupins superfamily protein. Encodes a member of the functionally diverse cupin protein superfamily that is involved in susceptibility to the bacterial plant pathogen Ralstonia solanacearum. It stabilizes the papain-like cysteine protease XCP2."]
["AT4G09960","STK",237.65,-1.3156,0.25909,-5.0779,{"v":3.82e-07,"d":"3.82E-07"},{"v":3.58E-6,"d":"3.58E-06"},"full_name=SEEDSTICK. K-box region and MADS-box transcription factor family protein. Encodes a MADS box transcription factor expressed in the carpel and ovules. Plays a maternal role in fertilization and seed development.","AT5G37800","RSL1",10.89,7.3262,1.7038,4.2999,{"v":1.71e-05,"d":"1.71E-05"},{"v":0.000159,"d":"1.59E-04"},"full_name=RHD SIX-LIKE 1. RHD SIX-LIKE 1.","AT3G51150",null,193.56,1.0446,0.25755,4.056,{"v":4.99E-5,"d":"4.99E-05"},{"v":4.57E-4,"d":"4.57E-04"},"ATP binding microtubule motor family protein."]
["AT3G54650","FBL17",412.72,0.83589,0.16465,5.0767,{"v":3.84E-7,"d":"3.84E-07"},{"v":3.59e-06,"d":"3.59E-06"},"RNI-like superfamily protein.","AT5G10130",null,101.05,1.3779,0.32054,4.2987,{"v":1.72e-05,"d":"1.72E-05"},{"v":0.00016,"d":"1.60E-04"},"Pollen Ole e 1 allergen and extensin family protein.","AT2G33180",null,153.64,-1.0973,0.27056,-4.0556,{"v":5e-05,"d":"5.00E-05"},{"v":4.57E-4,"d":"4.57E-04"},"hypothetical protein."]
["AT5G15020","SNL2",1023.5,-0.58129,0.11458,-5.0731,{"v":3.91e-07,"d":"3.91E-07"},{"v":3.66e-06,"d":"3.66E-06"},"full_name=SIN3-like 2. SIN3-like 2. Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).","AT2G29180",null,447.8,0.72552,0.16891,4.2952,{"v":1.75e-05,"d":"1.75E-05"},{"v":0.000162,"d":"1.62E-04"},"transmembrane protein.","AT2G32060",null,1275,-0.56131,0.1386,-4.0499,{"v":5.13E-5,"d":"5.13E-05"},{"v":0.000468,"d":"4.68E-04"},"Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein."]
["AT2G46510","AIB",273.6,-0.99972,0.19725,-5.0684,{"v":4.01E-7,"d":"4.01E-07"},{"v":3.74e-06,"d":"3.74E-06"},"full_name=ABA-inducible BHLH-type transcription factor. ABA-inducible BHLH-type transcription factor. Encodes a nuclear localized BLH domain containing transcriptional activator involved in response to ABA. Overexpression confers enhanced ABA responsiveness while loss of function mutants are ABA sensitive.","AT1G55340",null,361.99,0.76199,0.17767,4.2887,{"v":1.8E-5,"d":"1.80E-05"},{"v":0.000167,"d":"1.67E-04"},"hypothetical protein (DUF1639).","AT3G48195","SNX5",271.89,0.92861,0.2294,4.0479,{"v":5.17e-05,"d":"5.17E-05"},{"v":0.00047,"d":"4.70E-04"},"Phox (PX) domain-containing protein."]
["AT5G16620","TIC40",1743.1,0.55194,0.109,5.0638,{"v":4.11e-07,"d":"4.11E-07"},{"v":3.83e-06,"d":"3.83E-06"},"full_name=translocon at the inner envelope membrane of chloroplasts 40. hydroxyproline-rich glycoprotein family protein. chloroplast protein import (Tic40)","AT1G76180","ERD14",813.08,1.0559,0.24625,4.2878,{"v":1.8E-5,"d":"1.80E-05"},{"v":0.000167,"d":"1.67E-04"},"full_name=EARLY RESPONSE TO DEHYDRATION 14. Dehydrin family protein. Encodes a dehydrin protein whose expression is induced early on in response to dehydration stress. This gene's expression to cold occurs in two waves, with early induction occurring within 1 h and secondary induction occurring 5 h after the beginning of cold stress. Expression is also induced in response to ABA but not in response to 2,4-D, BA, and GA3. ERD14 protein is capable of binding Ca2+, especially when the protein is phosphorylated.","AT3G02480","ABR",5692.4,1.8003,0.44488,4.0466,{"v":5.2e-05,"d":"5.20E-05"},{"v":0.000472,"d":"4.72E-04"},"Late embryogenesis abundant protein (LEA) family protein."]
["AT3G52180","SEX4",2180.3,0.52135,0.10301,5.0614,{"v":4.16e-07,"d":"4.16E-07"},{"v":3.87e-06,"d":"3.87E-06"},"full_name=STARCH-EXCESS 4. dual specificity protein phosphatase (DsPTP1) family protein. Encodes a plant-specific glucan phosphatase that contains a noncatalytic carbohydrate-binding module as well as a dual specificity protein phosphatase domain. SEX4 can dephosphorylate C6- and C3-glucosyl residues on native starch grains and related maltodextrin compounds in vitro. This protein interacts with the plant SnRK AKIN11, binds starch, and is localized in the chloroplast. sex4 mutants have elevated levels of starch.","AT5G02810","PRR7",864.71,-0.60561,0.14135,-4.2845,{"v":1.83e-05,"d":"1.83E-05"},{"v":0.00017,"d":"1.70E-04"},"full_name=pseudo-response regulator 7. pseudo-response regulator 7. PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR7 expression levels. Acts as transcriptional repressor of CCA1 and LHY.","AT5G23450","LCBK1",748.16,0.69915,0.17283,4.0454,{"v":5.22e-05,"d":"5.22E-05"},{"v":0.000474,"d":"4.74E-04"},"full_name=long-chain base (LCB) kinase 1. long-chain base (LCB) kinase 1. Encodes a sphingosine kinase that specifically phosphorylates D-erythro-dihydrosphingosine (DHS), but not N-acetyl-DHS or D-threo-DHS. It also also phosphorylates D-erythro-sphingosine, trans-4, trans-8-sphingadienine and phytosphingosine."]
["AT2G01910","ATMAP65-6",479.53,-0.8292,0.16406,-5.0541,{"v":4.32E-7,"d":"4.32E-07"},{"v":4.01e-06,"d":"4.01E-06"},"Microtubule associated protein (MAP65/ASE1) family protein. Binds microtubules. Induces a crisscross mesh of microtubules, not bundles. Not involved in microtubule polymerization nor nucleation. Localizes to mitochondria.","AT2G16400","BLH7",306.54,0.85952,0.20081,4.2803,{"v":1.87e-05,"d":"1.87E-05"},{"v":0.000172,"d":"1.72E-04"},"full_name=BEL1-like homeodomain 7. BEL1-like homeodomain 7.","AT5G13450","ATP5",1731.6,-0.5369,0.13293,-4.039,{"v":5.37e-05,"d":"5.37E-05"},{"v":4.86E-4,"d":"4.86E-04"},"full_name=delta subunit of Mt ATP synthase. delta subunit of Mt ATP synthase."]
["AT1G74970","RPS9",1354.7,0.66073,0.13085,5.0494,{"v":4.43e-07,"d":"4.43E-07"},{"v":4.11e-06,"d":"4.11E-06"},"full_name=ribosomal protein S9. ribosomal protein S9. ribosomal protein S9, nuclear encoded component of the chloroplast ribosome","AT1G17080",null,374.54,-0.75052,0.17543,-4.2781,{"v":1.89e-05,"d":"1.89E-05"},{"v":1.74E-4,"d":"1.74E-04"},"Ribosomal protein L18ae family.","AT1G07350","SR45a",436.44,0.71899,0.17806,4.0379,{"v":5.39e-05,"d":"5.39E-05"},{"v":0.000488,"d":"4.88E-04"},"full_name=serine/arginine rich-like protein 45a. RNA-binding (RRM/RBD/RNP motifs) family protein. Encodes a serine/arginine rich-like protein, SR45a. Involved in the regulation of stress-responsive alternative splicing."]
["AT1G71000",null,23.276,7.9402,1.5745,5.0431,{"v":4.58E-7,"d":"4.58E-07"},{"v":4.23e-06,"d":"4.23E-06"},"Chaperone DnaJ-domain superfamily protein.","AT3G13640","ABCE1",22.913,-5.0849,1.1892,-4.2761,{"v":1.9e-05,"d":"1.90E-05"},{"v":1.75E-4,"d":"1.75E-04"},"full_name=ATP-binding cassette E1. RNAse l inhibitor protein 1. member of RLI subfamily","AT3G13860","HSP60-3A",328.61,-0.80881,0.20042,-4.0355,{"v":5.45e-05,"d":"5.45E-05"},{"v":0.000491,"d":"4.91E-04"},"full_name=heat shock protein 60-3A. heat shock protein 60-3A."]
["AT3G57080","NRPE5",410.72,-0.87617,0.17389,-5.0387,{"v":4.69e-07,"d":"4.69E-07"},{"v":4.32e-06,"d":"4.32E-06"},"Eukaryotic rpb5 RNA polymerase subunit family protein. Non-catalytic subunit unique to Nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB5.","AT1G07610","MT1C",56.569,-1.9164,0.44851,-4.2728,{"v":1.93e-05,"d":"1.93E-05"},{"v":0.000177,"d":"1.77E-04"},"full_name=metallothionein 1C. metallothionein 1C. one of the five metallothioneins (MTs) genes identified in Arabidopsis. MTs are cysteine-rich proteins required for heavy metal tolerance.","AT5G16830","SYP21",203.41,0.96196,0.23855,4.0325,{"v":5.52E-5,"d":"5.52E-05"},{"v":0.000497,"d":"4.97E-04"},"full_name=syntaxin of plants 21. syntaxin of plants 21. member of SYP2 Gene Family. Over-expression of the gene in tobacco protoplasts leads to a disruption of vacuolar transport from the prevacuolar compartment (PVC) to the vacuole, but not from the Golgi apparatus to the plasma membrane."]
["AT3G10450","SCPL7",707.04,-0.70642,0.14021,-5.0383,{"v":4.7E-7,"d":"4.70E-07"},{"v":4.33E-6,"d":"4.33E-06"},"full_name=serine carboxypeptidase-like 7. serine carboxypeptidase-like 7.","AT2G15050","LTP",60.69,1.6616,0.389,4.2716,{"v":1.94e-05,"d":"1.94E-05"},{"v":0.000178,"d":"1.78E-04"},"full_name=lipid transfer protein. lipid transfer protein. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.","AT5G55710","Tic20-V",199.44,-0.99476,0.24681,-4.0305,{"v":5.57e-05,"d":"5.57E-05"},{"v":0.000501,"d":"5.01E-04"},"full_name=translocon at the inner envelope membrane of chloroplasts 20-V. TIC 20-v-like protein. Encodes a component of the TIC (translocon at the inner envelope membrane of chloroplasts) protein translocation machinery mediating the protein translocation across the inner envelope of plastids. The Arabidopsis genome encodes four Tic20 homologous proteins, AT1G04940(Tic20-I), AT2G47840(Tic20-II), AT4G03320(Tic20-IV) and AT5G55710(Tic20-V)."]
["AT3G55750",null,4358.9,0.4343,0.086233,5.0363,{"v":4.75E-7,"d":"4.75E-07"},{"v":4.37e-06,"d":"4.37E-06"},"Ribosomal protein L35Ae family protein.","AT5G20860",null,14.99,-6.9223,1.6224,-4.2668,{"v":1.98E-5,"d":"1.98E-05"},{"v":0.000182,"d":"1.82E-04"},"Plant invertase/pectin methylesterase inhibitor superfamily.","AT4G10610","CID12",716.06,0.64735,0.16073,4.0276,{"v":5.64e-05,"d":"5.64E-05"},{"v":0.000506,"d":"5.06E-04"},"full_name=CTC-interacting domain 12. CTC-interacting domain 12. RNA-binding protein, putative. Member of a family of proteins having an PABC binding domain (PAM motif)."]
["AT5G41670","PGD3",1086,-0.60238,0.11994,-5.0223,{"v":5.1e-07,"d":"5.10E-07"},{"v":4.69E-6,"d":"4.69E-06"},"6-phosphogluconate dehydrogenase family protein.","AT5G63660","PDF2.5",10.59,7.2854,1.7092,4.2625,{"v":2.02E-5,"d":"2.02E-05"},{"v":1.85E-4,"d":"1.85E-04"},"Scorpion toxin-like knottin superfamily protein. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","AT3G44110","J3",2709.3,0.67616,0.16798,4.0254,{"v":5.69e-05,"d":"5.69E-05"},{"v":0.00051,"d":"5.10E-04"},"DNAJ homologue 3. homologous to the co-chaperon DNAJ protein from E coli"]
["AT3G03650","EDA5",103.39,-1.776,0.35365,-5.0218,{"v":5.12e-07,"d":"5.12E-07"},{"v":4.69E-6,"d":"4.69E-06"},"full_name=embryo sac development arrest 5. Exostosin family protein.","AT5G17190",null,1168.4,-0.53686,0.12596,-4.2622,{"v":2.02E-5,"d":"2.02E-05"},{"v":1.85E-4,"d":"1.85E-04"},"B-cell receptor-associated-like protein.","AT1G22985","CRF7",50.332,1.8305,0.45496,4.0233,{"v":5.74e-05,"d":"5.74E-05"},{"v":0.000514,"d":"5.14E-04"},"full_name=cytokinin response factor 7. Integrase-type DNA-binding superfamily protein. encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily."]
["AT2G23540",null,153.77,-1.2619,0.25147,-5.0182,{"v":5.22e-07,"d":"5.22E-07"},{"v":4.78E-6,"d":"4.78E-06"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT5G35100",null,210.32,1.8805,0.44148,4.2594,{"v":2.05E-5,"d":"2.05E-05"},{"v":0.000187,"d":"1.87E-04"},"Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein.","AT2G34460",null,302.96,0.86243,0.21454,4.02,{"v":5.82e-05,"d":"5.82E-05"},{"v":0.00052,"d":"5.20E-04"},"NAD(P)-binding Rossmann-fold superfamily protein."]
["AT4G02050","STP7",347.76,-0.87598,0.17468,-5.0148,{"v":5.31e-07,"d":"5.31E-07"},{"v":4.85e-06,"d":"4.85E-06"},"full_name=sugar transporter protein 7. sugar transporter protein 7.","AT1G61570","TIM13",606.71,-0.62269,0.14649,-4.2507,{"v":2.13e-05,"d":"2.13E-05"},{"v":1.94E-4,"d":"1.94E-04"},"full_name=translocase of the inner mitochondrial membrane 13. translocase of the inner mitochondrial membrane 13. Encodes a putative small zinc finger-like protein (TIM13); nucleus-encoded gene whose product is found in the mitochondrial inner membrane space.","AT2G25140","CLPB4",181.91,1.0667,0.26542,4.0188,{"v":5.85e-05,"d":"5.85E-05"},{"v":0.000521,"d":"5.21E-04"},"full_name=casein lytic proteinase B4. casein lytic proteinase B4. Encodes ClpB4, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Targeted to the mitochondrion, also referred to as ClpB-m. Transcripts of ClpB4 accumulate dramatically at high temperatures, suggesting that it may be involved in response to heat stress."]
["AT2G24430","NAC038",177.5,-1.5129,0.30197,-5.0099,{"v":5.45e-07,"d":"5.45E-07"},{"v":4.96e-06,"d":"4.96E-06"},"full_name=NAC domain containing protein 38. NAC domain containing protein 38.","AT2G24820","TIC55-II",863.99,-0.59427,0.13992,-4.2472,{"v":2.16E-5,"d":"2.16E-05"},{"v":0.000197,"d":"1.97E-04"},"full_name=translocon at the inner envelope membrane of chloroplasts 55-II. translocon at the inner envelope membrane of chloroplasts 55-II.","AT4G24450","PWD",120.37,1.2713,0.31647,4.0172,{"v":5.89e-05,"d":"5.89E-05"},{"v":0.000524,"d":"5.24E-04"},"full_name=phosphoglucan, water dikinase. phosphoglucan, water dikinase."]
["AT2G38230","PDX1.1",3305.5,0.57136,0.11411,5.007,{"v":5.53e-07,"d":"5.53E-07"},{"v":5.03e-06,"d":"5.03E-06"},"full_name=pyridoxine biosynthesis 1.1. pyridoxine biosynthesis 1.1. Encodes a protein predicted to function in tandem with PDX2 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis.","AT5G37600","GSR 1",1497.5,-0.51046,0.12027,-4.2443,{"v":2.19E-5,"d":"2.19E-05"},{"v":0.000199,"d":"1.99E-04"},"full_name=glutamine synthase clone R1. hypothetical protein. encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium","AT5G11110","SPS2F",631.42,2.9871,0.74393,4.0153,{"v":5.94E-5,"d":"5.94E-05"},{"v":0.000528,"d":"5.28E-04"},"full_name=sucrose phosphate synthase 2F. sucrose phosphate synthase 2F. Encodes a protein with putative sucrose-phosphate synthase activity.Involved in pollen exine formation."]
["AT4G15890","CAP-D3",94.435,1.6417,0.32807,5.0042,{"v":5.61e-07,"d":"5.61E-07"},{"v":5.1e-06,"d":"5.10E-06"},"binding protein.","AT4G18425","DMP4",60.809,-1.7486,0.41238,-4.2402,{"v":2.23E-5,"d":"2.23E-05"},{"v":2.02E-4,"d":"2.02E-04"},"transmembrane protein, putative (DUF679).","AT1G27510","EX2",716.63,0.69674,0.17356,4.0143,{"v":5.96e-05,"d":"5.96E-05"},{"v":0.000529,"d":"5.29E-04"},"full_name=EXECUTER 2. UvrB/UvrC domain protein (DUF3506). Encodes one of the two plastid proteins EXECUTER (EX1, AT4G33630) and EX2 (AT1G27510). Mediates singlet oxygen induced programmed cell death."]
["AT1G65010",null,731.56,-0.64019,0.12797,-5.0027,{"v":5.65e-07,"d":"5.65E-07"},{"v":5.13E-6,"d":"5.13E-06"},"WEB family protein (DUF827). Encodes a microtubule-associated protein. Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication).","AT1G14080","FUT6",10.525,7.2712,1.716,4.2373,{"v":2.26E-5,"d":"2.26E-05"},{"v":2.05E-4,"d":"2.05E-04"},"full_name=fucosyltransferase 6. fucosyltransferase 6. Encodes an alpha-(1,2)-fucosyltransferase.","AT3G51510",null,413.53,0.76127,0.18968,4.0134,{"v":5.99e-05,"d":"5.99E-05"},{"v":5.31E-4,"d":"5.31E-04"},"transmembrane protein."]
["AT2G38170","CAX1",492.17,-0.84924,0.16999,-4.9958,{"v":5.86e-07,"d":"5.86E-07"},{"v":5.31E-6,"d":"5.31E-06"},"full_name=cation exchanger 1. cation exchanger 1. Encodes a high affinity vacuolar calcium antiporter. The residue His 338 is critical to Ca2+ transport activity. Disruption of CAX1 reduces manganese and zinc of shoot tissue and results in a decrease in the activity of vacuolar V-type proton ATPase.","AT3G12710",null,95.249,1.7314,0.4094,4.2291,{"v":2.35e-05,"d":"2.35E-05"},{"v":2.12E-4,"d":"2.12E-04"},"DNA glycosylase superfamily protein.","AT2G33630",null,402.26,0.79266,0.19781,4.0071,{"v":6.15e-05,"d":"6.15E-05"},{"v":0.000543,"d":"5.43E-04"},"NAD(P)-binding Rossmann-fold superfamily protein."]
["AT1G49730",null,304.68,-1.2588,0.25203,-4.9946,{"v":5.9e-07,"d":"5.90E-07"},{"v":5.33e-06,"d":"5.33E-06"},"Protein kinase superfamily protein.","AT5G19780","TUA5",1575.4,0.48427,0.11453,4.2282,{"v":2.36e-05,"d":"2.36E-05"},{"v":2.12E-4,"d":"2.12E-04"},"full_name=tubulin alpha-5. tubulin alpha-5. Encodes an isoform of alpha tubulin. Closely related to adjacent gene TUA3 suggesting recent duplication.","AT5G17490","RGL3",375.65,-0.80388,0.20089,-4.0015,{"v":6.29e-05,"d":"6.29E-05"},{"v":0.000556,"d":"5.56E-04"},"full_name=RGA-like protein 3. RGA-like protein 3. DELLA subfamily member involved in GA signal transduction"]
["AT2G36620","RPL24A",3059.7,0.50522,0.10127,4.9891,{"v":6.07e-07,"d":"6.07E-07"},{"v":5.48E-6,"d":"5.48E-06"},"full_name=ribosomal protein L24. ribosomal protein L24. RPL24A encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B (AT3G53020).","AT2G43710","SSI2",754.77,-0.63394,0.15019,-4.2211,{"v":2.43e-05,"d":"2.43E-05"},{"v":0.000219,"d":"2.19E-04"},"full_name=suppressor of SA insensitive 2. Plant stearoyl-acyl-carrier-protein desaturase family protein. Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates.","AT2G15000",null,134.34,-1.1459,0.28658,-3.9986,{"v":6.37e-05,"d":"6.37E-05"},{"v":5.62E-4,"d":"5.62E-04"},"caspase-6 protein."]
["AT1G04920","SPS3F",292.7,-1.0083,0.20223,-4.9859,{"v":6.17e-07,"d":"6.17E-07"},{"v":5.56e-06,"d":"5.56E-06"},"full_name=sucrose phosphate synthase 3F. sucrose phosphate synthase 3F. Encodes a protein with putative sucrose-phosphate synthase activity.","AT4G14040","SBP2",190.39,-0.9843,0.23334,-4.2182,{"v":2.46e-05,"d":"2.46E-05"},{"v":0.000221,"d":"2.21E-04"},"full_name=selenium-binding protein 2. selenium-binding protein 2.","AT1G36160","ACC1",1392.5,0.5364,0.13426,3.9952,{"v":6.46e-05,"d":"6.46E-05"},{"v":0.000569,"d":"5.69E-04"},"full_name=acetyl-CoA carboxylase 1. acetyl-CoA carboxylase 1. Encodes acetyl-CoA carboxylase. Mutant displays uncoordinated cell divisions which are enhanced by cytokinins. Mutant also has aberrant organization of the apical region in the embryo and abnormal root and shoot development and is deficient in freezing tolerance after cold acclimation. Essential for very long chain fatty acid elongation."]
["AT1G62610",null,546.52,-1.1474,0.23023,-4.9835,{"v":6.24e-07,"d":"6.24E-07"},{"v":5.62e-06,"d":"5.62E-06"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT5G09710",null,15.526,5.3202,1.2632,4.2115,{"v":2.54e-05,"d":"2.54E-05"},{"v":0.000227,"d":"2.27E-04"},"Magnesium transporter CorA-like family protein. (Araport11)truncated, transcript detected in seedling, leaf, flower, and pollen RNAseq datasets used in Araport11","AT1G26630","FBR12",4840.6,-0.47071,0.11785,-3.9942,{"v":6.49e-05,"d":"6.49E-05"},{"v":0.00057,"d":"5.70E-04"},"full_name=FUMONISIN B1-RESISTANT12. Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein. Eukaryotic translation initiation factor 5A-2. Involved in programmed cell death triggered as a response to pseudomonas syringae infection. Loss of function mutants are more resistant to infection."]
["AT1G62080","TBA3",7213.7,-6.4819,1.3009,-4.9826,{"v":6.27e-07,"d":"6.27E-07"},{"v":5.64e-06,"d":"5.64E-06"},"transmembrane protein.","AT4G08690",null,196.52,0.98996,0.23512,4.2104,{"v":2.55E-5,"d":"2.55E-05"},{"v":0.000228,"d":"2.28E-04"},"Sec14p-like phosphatidylinositol transfer family protein.","AT4G13930","SHM4",1269.6,-0.54229,0.13579,-3.9936,{"v":6.51e-05,"d":"6.51E-05"},{"v":5.71E-4,"d":"5.71E-04"},"full_name=serine hydroxymethyltransferase 4. serine hydroxymethyltransferase 4. Encodes a serine hydroxymethyltransferase maximally expressed in root"]
["AT3G15000","RIP1",4951.4,0.45356,0.091122,4.9775,{"v":6.44E-7,"d":"6.44E-07"},{"v":5.78e-06,"d":"5.78E-06"},"full_name=RNA-editing factor interacting protein 1. cobalt ion binding protein. Encodes RIP1 (RNA-editing factor interacting protein 1). Involved in chloroplast and mitochondrial RNA editing.","AT3G02790","MBS1",1045.2,-0.5685,0.13519,-4.2051,{"v":2.61e-05,"d":"2.61E-05"},{"v":2.33E-4,"d":"2.33E-04"},"zinc finger (C2H2 type) family protein.","AT1G73390",null,375.37,0.89691,0.22489,3.9882,{"v":6.66e-05,"d":"6.66E-05"},{"v":0.000583,"d":"5.83E-04"},"Endosomal targeting BRO1-like domain-containing protein."]
["AT1G62060","TBA2",734.45,-6.6295,1.3326,-4.9749,{"v":6.53e-07,"d":"6.53E-07"},{"v":5.85e-06,"d":"5.85E-06"},"transmembrane protein.","AT3G47080",null,286.93,-0.84807,0.20198,-4.1987,{"v":2.68e-05,"d":"2.68E-05"},{"v":0.000239,"d":"2.39E-04"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT4G32190","PII1",123.21,1.2208,0.30648,3.9832,{"v":6.8e-05,"d":"6.80E-05"},{"v":0.000594,"d":"5.94E-04"},"Myosin heavy chain-related protein."]
["AT3G05120","GID1A",442.31,-0.77538,0.15593,-4.9726,{"v":6.61E-7,"d":"6.61E-07"},{"v":5.91e-06,"d":"5.91E-06"},"full_name=GA INSENSITIVE DWARF1A. alpha/beta-Hydrolases superfamily protein. Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4. The DELLA region alone can interact with GID1A in GA-dependent manner in a Y2H assay.","AT2G30150",null,31.847,2.6319,0.62723,4.1961,{"v":2.72E-5,"d":"2.72E-05"},{"v":2.42E-4,"d":"2.42E-04"},"UDP-Glycosyltransferase superfamily protein.","AT3G61600","POB1",579.41,0.65534,0.16462,3.9809,{"v":6.86E-5,"d":"6.86E-05"},{"v":0.0006,"d":"6.00E-04"},"full_name=POZ/BTB containin G-protein 1. POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1. Involvement in protein ubiquitylation is predicted based on physical interaction with CULLIN 3 proteins."]
["AT5G61430","NAC100",65.969,-1.9393,0.39013,-4.9709,{"v":6.66e-07,"d":"6.66E-07"},{"v":5.95e-06,"d":"5.95E-06"},"full_name=NAC domain containing protein 100. NAC domain containing protein 100.","AT3G30214",null,63.624,1.6512,0.39389,4.1922,{"v":2.76E-5,"d":"2.76E-05"},{"v":0.000246,"d":"2.46E-04"},"pseudogene. pseudogene of unknown protein","AT1G34190","NAC017",626.32,0.75552,0.18987,3.9792,{"v":6.91e-05,"d":"6.91E-05"},{"v":0.000603,"d":"6.03E-04"},"full_name=NAC domain containing protein 17. NAC domain containing protein 17."]
["AT1G75730",null,275.09,-1.0116,0.20379,-4.9639,{"v":6.91e-07,"d":"6.91E-07"},{"v":6.16e-06,"d":"6.16E-06"},"hypothetical protein.","AT3G13470","Cpn60beta2",2253.4,0.46187,0.11039,4.1839,{"v":2.87E-5,"d":"2.87E-05"},{"v":0.000254,"d":"2.54E-04"},"full_name=chaperonin-60beta2. TCP-1/cpn60 chaperonin family protein. Encodes a subunit of chloroplasts chaperonins that are involved in mediating the folding of newly synthesized, translocated, or stress-denatured proteins. Cpn60 subunits are: Cpn60alpha1 (At2g28000), AtCpn60alpha2 (At5g18820), AtCpn60beta1 (At1g55490), AtCpn60beta2 (At3g13470), AtCpn60beta3 (At5g56500), AtCpn60beta4 (At1g26230).","AT4G24020","NLP7",337.93,0.79339,0.19954,3.976,{"v":7.01e-05,"d":"7.01E-05"},{"v":0.00061,"d":"6.10E-04"},"full_name=NIN like protein 7. NIN like protein 7. Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor."]
["AT4G36130",null,3197.4,0.44389,0.089493,4.9601,{"v":7.05e-07,"d":"7.05E-07"},{"v":6.27e-06,"d":"6.27E-06"},"Ribosomal protein L2 family.","AT1G10400",null,9.9919,7.2001,1.7224,4.1803,{"v":2.91e-05,"d":"2.91E-05"},{"v":0.000258,"d":"2.58E-04"},"UDP-Glycosyltransferase superfamily protein.","AT4G34740","ASE2",199.68,0.9422,0.23729,3.9707,{"v":7.17e-05,"d":"7.17E-05"},{"v":0.000622,"d":"6.22E-04"},"full_name=GLN phosphoribosyl pyrophosphate amidotransferase 2. GLN phosphoribosyl pyrophosphate amidotransferase 2. Encodes glutamine 5-phosphoribosylpyrophosphate amidotransferase. Mutants are deficient in leaf, but not cotyledon, plastid and palisade cell development. Mutants exhibit defective chloroplast development under non-low light, suggesting that the defect in chloroplast development is caused by photo-oxidative damage. Plays role in differential development of vascular-associated cells. Demonstrates a cell-specific difference in chloroplast development.Mutant leaves are highly reticulate with a green vascular pattern."]
["AT4G10690",null,1064.9,0.62775,0.12667,4.9559,{"v":7.2e-07,"d":"7.20E-07"},{"v":6.39e-06,"d":"6.39E-06"},"transposable_element_gene.","AT3G03890",null,491.92,-0.72585,0.17378,-4.1768,{"v":2.96e-05,"d":"2.96E-05"},{"v":2.61E-4,"d":"2.61E-04"},"FMN binding protein.","AT3G14370","WAG2",52.712,-1.8352,0.46243,-3.9686,{"v":7.23e-05,"d":"7.23E-05"},{"v":0.000627,"d":"6.27E-04"},"Protein kinase superfamily protein. The WAG2 and its homolog, WAG1 each encodes protein-serine/threonine kinase that are nearly 70% identical to PsPK3 protein. All three together with CsPK3 belong to PsPK3-type kinases. At the N-terminus, all four possess a serine/threonine-rich domain. They are closely related to Arabidopsis kinases PINOID. wag1/wag2 double mutants exhibit a pronounced wavy root phenotype when grown vertically on agar plates (while wild-type plants develop wavy roots only on plates inclined to angles less than 90 degrees), indicating an overlapping role for WAG1 and WAG2 as suppressors of root waving. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons."]
["AT5G22010","RFC1",684.53,-0.67555,0.13634,-4.955,{"v":7.23E-7,"d":"7.23E-07"},{"v":6.42e-06,"d":"6.42E-06"},"full_name=replication factor C1. replication factor C1. Encodes RFC1, the largest subunit of replication factor C. Mediates genomic stability and transcriptional gene silencing.","AT3G06868",null,92.571,1.303,0.31202,4.1759,{"v":2.97E-5,"d":"2.97E-05"},{"v":0.000262,"d":"2.62E-04"},"vitellogenin-like protein.","AT1G27770","ACA1",462.65,0.6986,0.17605,3.9683,{"v":7.24e-05,"d":"7.24E-05"},{"v":0.000627,"d":"6.27E-04"},"full_name=autoinhibited Ca2+-ATPase 1. autoinhibited Ca2+-ATPase 1. Encodes a chloroplast envelope Ca2+-ATPase with an N-terminal autoinhibitor."]
["AT4G29870",null,450.04,-0.76924,0.15535,-4.9517,{"v":7.36e-07,"d":"7.36E-07"},{"v":6.52e-06,"d":"6.52E-06"},"Oligosaccharyltransferase complex/magnesium transporter family protein.","AT2G47780","LDAP2",2385.6,0.59857,0.14337,4.175,{"v":2.98e-05,"d":"2.98E-05"},{"v":2.63E-4,"d":"2.63E-04"},"Rubber elongation factor protein (REF).","AT5G24950","CYP71A15",23.043,2.8956,0.73068,3.9629,{"v":7.4e-05,"d":"7.40E-05"},{"v":0.00064,"d":"6.40E-04"},"full_name=cytochrome P450, family 71, subfamily A, polypeptide 15. cytochrome P450, family 71, subfamily A, polypeptide 15. putative cytochrome P450"]
["AT4G08390","SAPX",467.56,0.77716,0.15709,4.9472,{"v":7.53e-07,"d":"7.53E-07"},{"v":6.65e-06,"d":"6.65E-06"},"full_name=stromal ascorbate peroxidase. stromal ascorbate peroxidase. Encodes a chloroplastic stromal ascorbate peroxidase sAPX. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.","AT4G21450",null,326.79,0.75082,0.17989,4.1739,{"v":2.99e-05,"d":"2.99E-05"},{"v":0.000264,"d":"2.64E-04"},"PapD-like superfamily protein.","AT1G12580","PEPKR1",362.31,0.84879,0.21456,3.956,{"v":7.62e-05,"d":"7.62E-05"},{"v":0.000658,"d":"6.58E-04"},"full_name=phosphoenolpyruvate carboxylase-related kinase 1. phosphoenolpyruvate carboxylase-related kinase 1."]
["AT2G01470","STL2P",1168.5,-0.56222,0.11382,-4.9394,{"v":7.83e-07,"d":"7.83E-07"},{"v":6.92e-06,"d":"6.92E-06"},"full_name=SEC12P-like 2 protein. SEC12P-like 2 protein. Sec12p-like protein (GTP exchange protein) that functionally complements yeast sec12 null mutant. Protein is localized to the ER.","AT4G15510","PPD1",139.73,1.2834,0.30762,4.1721,{"v":3.02e-05,"d":"3.02E-05"},{"v":0.000265,"d":"2.65E-04"},"full_name=PsbP-Domain Protein1. Photosystem II reaction center PsbP family protein. A nuclear-encoded thylakoid lumenal protein that is associated with photosystem I (PSI) but is not an integral subunit of PSI. It is an PSI assembly factor that assists the proper folding and integration of PsaB and PsaA into the thylakoid membrane. It is involved in the assembly of PSI reaction center heterodimer core.","AT2G26210",null,299.25,0.8528,0.21569,3.9539,{"v":7.69e-05,"d":"7.69E-05"},{"v":0.000663,"d":"6.63E-04"},"Ankyrin repeat family protein."]
["AT1G09500",null,791.74,-0.78419,0.1588,-4.9383,{"v":7.88e-07,"d":"7.88E-07"},{"v":6.95e-06,"d":"6.95E-06"},"NAD(P)-binding Rossmann-fold superfamily protein. similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase","AT3G26170","CYP71B19",68.75,1.8985,0.45526,4.1701,{"v":3.04E-5,"d":"3.04E-05"},{"v":0.000267,"d":"2.67E-04"},"full_name=cytochrome P450, family 71, subfamily B, polypeptide 19. cytochrome P450, family 71, subfamily B, polypeptide 19. putative cytochrome P450","AT3G08850","RAPTOR1",663.86,0.6416,0.16237,3.9515,{"v":7.77e-05,"d":"7.77E-05"},{"v":6.69E-4,"d":"6.69E-04"},"Regulatory-associated protein of TOR 1. Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive."]
["AT2G15000",null,374.11,0.94914,0.19264,4.9271,{"v":8.34e-07,"d":"8.34E-07"},{"v":7.34E-6,"d":"7.34E-06"},"caspase-6 protein.","AT2G24290",null,239.64,0.88597,0.21262,4.1669,{"v":3.09e-05,"d":"3.09E-05"},{"v":0.000271,"d":"2.71E-04"},"ubiquitin-associated protein (DUF1068).","AT5G43060","RD21B",562.78,-0.65648,0.1664,-3.9453,{"v":7.97e-05,"d":"7.97E-05"},{"v":0.000685,"d":"6.85E-04"},"full_name=esponsive to dehydration 21B. Granulin repeat cysteine protease family protein."]
["AT3G52300","ATPQ",2612.4,0.56169,0.11417,4.9199,{"v":8.66e-07,"d":"8.66E-07"},{"v":7.6e-06,"d":"7.60E-06"},"full_name=ATP synthase D chain, mitochondrial. ATP synthase D chain.","AT5G66560",null,149.78,1.1975,0.28776,4.1613,{"v":3.16e-05,"d":"3.16E-05"},{"v":0.000277,"d":"2.77E-04"},"Phototropic-responsive NPH3 family protein.","AT5G63640",null,316.96,0.80217,0.20341,3.9436,{"v":8.03E-5,"d":"8.03E-05"},{"v":0.000688,"d":"6.88E-04"},"ENTH/VHS/GAT family protein."]
["AT1G76550",null,255.35,-1.1795,0.24004,-4.9136,{"v":8.94e-07,"d":"8.94E-07"},{"v":7.84e-06,"d":"7.84E-06"},"Phosphofructokinase family protein.","AT2G41475","ATS3A",468.69,0.7801,0.18753,4.1599,{"v":3.18E-5,"d":"3.18E-05"},{"v":0.000278,"d":"2.78E-04"},"Embryo-specific protein 3, (ATS3).","AT3G22210",null,102.15,-1.2688,0.32185,-3.9422,{"v":8.08e-05,"d":"8.08E-05"},{"v":0.000691,"d":"6.91E-04"},"transmembrane protein."]
["AT1G22410",null,974.64,-0.61604,0.12544,-4.9109,{"v":9.06e-07,"d":"9.06E-07"},{"v":7.93e-06,"d":"7.93E-06"},"Class-II DAHP synthetase family protein.","AT2G38250",null,13.855,-6.8074,1.6379,-4.1561,{"v":3.24e-05,"d":"3.24E-05"},{"v":0.000282,"d":"2.82E-04"},"Homeodomain-like superfamily protein.","AT3G12520","SULTR4;2",146.45,-1.2016,0.3051,-3.9383,{"v":8.2e-05,"d":"8.20E-05"},{"v":0.000701,"d":"7.01E-04"},"full_name=sulfate transporter 4;2. sulfate transporter 4;2. Encodes a sulfate transporter that in induced under sulfate limitation."]
["AT1G02280","TOC33",1522.7,0.51773,0.10549,4.908,{"v":9.2e-07,"d":"9.20E-07"},{"v":8.05e-06,"d":"8.05E-06"},"full_name=translocon at the outer envelope membrane of chloroplasts 33. translocon at the outer envelope membrane of chloroplasts 33. Encodes a GTP-binding GTP-ase. Component of the chloroplast protein import machinery. Required for import of POR B into plastids. Toc33 phosphorylation may not play an important role in vivo.","AT1G69810","WRKY36",10.382,7.2481,1.7446,4.1546,{"v":3.26E-5,"d":"3.26E-05"},{"v":0.000284,"d":"2.84E-04"},"full_name=WRKY DNA-binding protein 36. WRKY DNA-binding protein 36. member of WRKY Transcription Factor; Group II-b","AT5G65140","TPPJ",106.1,1.2452,0.31624,3.9376,{"v":8.23e-05,"d":"8.23E-05"},{"v":0.000703,"d":"7.03E-04"},"full_name=trehalose-6-phosphate phosphatase J. Haloacid dehalogenase-like hydrolase (HAD) superfamily protein."]
["AT5G65710","HSL2",138.23,-1.3736,0.28019,-4.9023,{"v":9.47E-7,"d":"9.47E-07"},{"v":8.27e-06,"d":"8.27E-06"},"full_name=HAESA-like 2. HAESA-like 2. Encodes a protein controlling the separation step of floral organ abscission.","AT4G02230",null,2982.8,-0.56615,0.1364,-4.1507,{"v":3.31e-05,"d":"3.31E-05"},{"v":0.000288,"d":"2.88E-04"},"Ribosomal protein L19e family protein.","AT2G03390",null,646.08,0.62669,0.15919,3.9369,{"v":8.26e-05,"d":"8.26E-05"},{"v":0.000704,"d":"7.04E-04"},"uvrB/uvrC motif-containing protein."]
["AT1G21050",null,86.58,-1.6867,0.34422,-4.9001,{"v":9.58e-07,"d":"9.58E-07"},{"v":8.34e-06,"d":"8.34E-06"},"MIZU-KUSSEI-like protein (Protein of unknown function, DUF617).","AT5G14570","NRT2.7",750.76,-0.66447,0.1602,-4.1477,{"v":3.36e-05,"d":"3.36E-05"},{"v":0.000291,"d":"2.91E-04"},"full_name=high affinity nitrate transporter 2.7. high affinity nitrate transporter 2.7. Encodes ATNRT2.7, a nitrate transporter that controls nitrate content in seeds. Expression is detected in reproductive organs and peaks in seeds. Localized to the vacuolar membrane.","AT1G03090","MCCA",288.5,0.82101,0.20881,3.9318,{"v":8.43e-05,"d":"8.43E-05"},{"v":0.000717,"d":"7.17E-04"},"methylcrotonyl-CoA carboxylase alpha chain. MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion."]
["AT1G43710","EMB1075",1265.8,-0.58888,0.12019,-4.8997,{"v":9.6e-07,"d":"9.60E-07"},{"v":8.35e-06,"d":"8.35E-06"},"full_name=embryo defective 1075. Pyridoxal phosphate (PLP)-dependent transferases superfamily protein. Encodes a serine decarboxylase that is involved in ethanolamine metabolism and is crucial for plant growth.","AT3G01420","DOX1",365.87,-3.2628,0.78684,-4.1467,{"v":3.37e-05,"d":"3.37E-05"},{"v":2.92E-4,"d":"2.92E-04"},"Peroxidase superfamily protein. Encodes an alpha-dioxygenase involved in protection against oxidative stress and cell death. Induced in response to Salicylic acid and oxidative stress. Independent of NPR1 in induction by salicylic acid.","AT4G02260","RSH1",586.7,0.66714,0.16973,3.9307,{"v":8.47e-05,"d":"8.47E-05"},{"v":0.000719,"d":"7.19E-04"},"full_name=RELA/SPOT homolog 1. RELA/SPOT homolog 1."]
["AT1G23640",null,24.352,-8.0994,1.656,-4.891,{"v":1e-06,"d":"1.00E-06"},{"v":8.72e-06,"d":"8.72E-06"},"OBP32pep protein.","AT5G41290",null,9.7708,7.1654,1.7304,4.1409,{"v":3.46e-05,"d":"3.46E-05"},{"v":2.99E-4,"d":"2.99E-04"},"Receptor-like protein kinase-related family protein.","AT1G03680","THM1",648.68,-0.65375,0.16644,-3.9279,{"v":8.57e-05,"d":"8.57E-05"},{"v":7.27E-4,"d":"7.27E-04"},"full_name=thioredoxin M-type 1. thioredoxin M-type 1. encodes a chloroplast thioredoxin similar to prokaryotic thioredoxins."]
["AT5G05690","CPD",967.89,-0.79905,0.16353,-4.8864,{"v":1.03e-06,"d":"1.03E-06"},{"v":8.9e-06,"d":"8.90E-06"},"full_name=CONSTITUTIVE PHOTOMORPHOGENIC DWARF. Cytochrome P450 superfamily protein. Encodes a member of the CP90A family, a cytochrome P450 monooxygenase which converts 6-deoxocathasterone to 6-deoxoteasterone in the late C6 oxidation pathway and cathasterone to teasterone in the early C6 oxidation pathway of brassinolide biosynthesis. Expressed in cotyledons and leaves. Mutants display de-etiolation and derepression of light-induced genes in the dark, dwarfism, male sterility and activation of stress-regulated genes in the light. The expression of the gene using a CPD promoter:LUC fusion construct was shown to be under circadian and light control. Additionally, the circadian regulation was shown to be independent of BR levels as it remains unchanged in <i>bri1</i> mutant lines. CPD appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through a BRI1-mediated signaling pathway that affects FLC expression levels, as uncovered by double mutant analyses.","AT5G16390","CAC1",518.86,0.67632,0.16354,4.1354,{"v":3.54E-5,"d":"3.54E-05"},{"v":0.000306,"d":"3.06E-04"},"full_name=chloroplastic acetylcoenzyme A carboxylase 1. chloroplastic acetylcoenzyme A carboxylase 1. Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex.","AT5G18460",null,150.57,-1.1779,0.30047,-3.9202,{"v":8.85e-05,"d":"8.85E-05"},{"v":0.000749,"d":"7.49E-04"},"carboxyl-terminal peptidase (DUF239)."]
["AT1G64740","TUA1",289.65,-1.0184,0.20855,-4.8831,{"v":1.04E-6,"d":"1.04E-06"},{"v":9.03e-06,"d":"9.03E-06"},"full_name=alpha-1 tubulin. alpha-1 tubulin. alpha-tubulin expressed primarily in stamens and mature pollen","AT5G23575",null,1925.1,0.50191,0.12142,4.1337,{"v":3.57E-5,"d":"3.57E-05"},{"v":0.000308,"d":"3.08E-04"},"Transmembrane CLPTM1 family protein.","AT3G63500","TTA2",716.54,0.7484,0.19103,3.9176,{"v":8.94e-05,"d":"8.94E-05"},{"v":0.000755,"d":"7.55E-04"},"full_name=TITANIA 2. fibronectin type III domain protein (DUF1423). Encodes a PHD-finger protein that, with TTA2, is redundantly required for MP-dependent embryonic root meristem initiation."]
["AT3G06430","PPR2",852.93,0.59632,0.12212,4.8831,{"v":1.04E-6,"d":"1.04E-06"},{"v":9.03e-06,"d":"9.03E-06"},"full_name=pentatricopeptide repeat 2. Tetratricopeptide repeat (TPR)-like superfamily protein. Encodes PPR2, a pentatricopeptide repeat protein. Binds to plastid 23S rRNA and plays an important role in the first mitotic division during gametogenesis and in cell proliferation during embryogenesis.","AT4G13030",null,243.39,-0.9048,0.2189,-4.1334,{"v":3.57E-5,"d":"3.57E-05"},{"v":0.000308,"d":"3.08E-04"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT2G35300","LEA18",278.65,3.339,0.85244,3.917,{"v":8.96e-05,"d":"8.96E-05"},{"v":0.000757,"d":"7.57E-04"},"full_name=late embryogenesis abundant 18. Late embryogenesis abundant protein, group 1 protein. Encodes LEA4-2/LEA18, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment."]
["AT1G02305","ATCATHB2",2925.1,-0.49373,0.10123,-4.8772,{"v":1.08E-6,"d":"1.08E-06"},{"v":9.29e-06,"d":"9.29E-06"},"Cysteine proteinases superfamily protein.","AT5G65590","SCAP1",135.56,-1.2345,0.29882,-4.1312,{"v":3.61e-05,"d":"3.61E-05"},{"v":3.1E-4,"d":"3.10E-04"},"Dof-type zinc finger DNA-binding family protein. Encodes a plant-specific Dof-type transcription factor expressed in maturing guard cells, but not in guard mother cells. It regulates essential processes of stomatal guard cell maturation and functions as a key transcription factor regulating the final stages of guard cell differentiation.","AT3G18580","SSB2",74.323,-1.4763,0.37711,-3.9149,{"v":9.05e-05,"d":"9.05E-05"},{"v":0.000762,"d":"7.62E-04"},"Nucleic acid-binding, OB-fold-like protein."]
["AT1G04730","CTF18",143.77,1.2887,0.26428,4.8763,{"v":1.08E-6,"d":"1.08E-06"},{"v":9.32e-06,"d":"9.32E-06"},"full_name=CHROMOSOME TRANSMISSION FIDELITY 18. P-loop containing nucleoside triphosphate hydrolases superfamily protein. Necessary for sister chromatid cohesion. Acts in synergy with ETG1.","AT3G12780","PGK1",2678.3,0.48629,0.11774,4.1301,{"v":3.63e-05,"d":"3.63E-05"},{"v":0.000311,"d":"3.11E-04"},"full_name=phosphoglycerate kinase 1. phosphoglycerate kinase 1. nuclear phosphoglycerate kinase (PGK1)","AT3G14200",null,236.59,0.91714,0.23471,3.9075,{"v":9.33e-05,"d":"9.33E-05"},{"v":7.85E-4,"d":"7.85E-04"},"Chaperone DnaJ-domain superfamily protein."]
["AT1G06640",null,434.15,-1.282,0.26318,-4.8712,{"v":1.11E-6,"d":"1.11E-06"},{"v":9.54e-06,"d":"9.54E-06"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase","AT2G46390","SDH8",1273.1,-0.92044,0.2231,-4.1257,{"v":3.7e-05,"d":"3.70E-05"},{"v":0.000317,"d":"3.17E-04"},"full_name=succinate dehydrogenase 8. succinate dehydrogenase subunit. predicted to encode subunit 8 of mitochondrial complex II and to participate in the respiratory chain","AT2G39460","RPL23AA",3815,-0.68415,0.1752,-3.9049,{"v":9.43e-05,"d":"9.43E-05"},{"v":0.000791,"d":"7.91E-04"},"full_name=ribosomal protein L23AA. ribosomal protein L23AA. Encodes a 60S ribosomal protein L23aA (AtrpL23aA). Paralog of RLPL23aB."]
["AT5G14130",null,21.324,-7.9087,1.6255,-4.8654,{"v":1.14e-06,"d":"1.14E-06"},{"v":9.81e-06,"d":"9.81E-06"},"Peroxidase superfamily protein.","AT3G25770","AOC2",1310.4,-0.68707,0.16668,-4.1222,{"v":3.75e-05,"d":"3.75E-05"},{"v":3.21E-4,"d":"3.21E-04"},"full_name=allene oxide cyclase 2. allene oxide cyclase 2. Encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is induced during senescence, a process that involves jasmonic acid signalling pathway. Note: Nomenclature for Arabidopsis allene oxide cyclase 2 (AOC2, AT3G25770) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC2 (AT3G25770) is also referred to as AOC3 in He et al. 2002 Plant Physiology, 128:876-884.","AT1G55920","SERAT2;1",85.012,1.643,0.42098,3.9028,{"v":9.51e-05,"d":"9.51E-05"},{"v":0.000797,"d":"7.97E-04"},"full_name=serine acetyltransferase 2;1. serine acetyltransferase 2;1. Encodes a chloroplast/cytosol localized serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system."]
["AT1G31480","SGR2",391.89,-0.90397,0.1859,-4.8625,{"v":1.16e-06,"d":"1.16E-06"},{"v":9.94e-06,"d":"9.94E-06"},"full_name=SHOOT GRAVITROPISM 2. shoot gravitropism 2 (SGR2). encodes a novel protein that may be part of a gene family represented by bovine phosphatidic acid-preferring phospholipase A1 (PA-PLA1)containing a putative transmembrane domain. SGR2 is involved in the formation and function of the vacuole.","AT5G01620","TBL35",71.655,1.4849,0.36046,4.1194,{"v":3.8e-05,"d":"3.80E-05"},{"v":0.000325,"d":"3.25E-04"},"full_name=TRICHOME BIREFRINGENCE-LIKE 35. TRICHOME BIREFRINGENCE-LIKE 35. Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","AT1G19490",null,162.74,1.0284,0.26365,3.9007,{"v":9.59E-5,"d":"9.59E-05"},{"v":8.03E-4,"d":"8.03E-04"},"Basic-leucine zipper (bZIP) transcription factor family protein."]
["AT1G20950",null,474.1,0.833,0.17165,4.8528,{"v":1.22E-6,"d":"1.22E-06"},{"v":1.04E-5,"d":"1.04E-05"},"Phosphofructokinase family protein.","AT1G22550","NPF5.16",34.781,2.2264,0.54145,4.112,{"v":3.92e-05,"d":"3.92E-05"},{"v":0.000334,"d":"3.34E-04"},"Major facilitator superfamily protein.","AT4G16520","ATG8F",710.01,0.86817,0.22268,3.8988,{"v":9.67e-05,"d":"9.67E-05"},{"v":0.000807,"d":"8.07E-04"},"full_name=autophagy 8f. Ubiquitin-like superfamily protein."]
["AT3G24240","RGFR1",1064.8,0.54473,0.11231,4.8503,{"v":1.23e-06,"d":"1.23E-06"},{"v":1.05e-05,"d":"1.05E-05"},"Leucine-rich repeat receptor-like protein kinase family protein.","AT2G38800",null,162.28,-1.0301,0.2507,-4.1088,{"v":3.98e-05,"d":"3.98E-05"},{"v":3.39E-4,"d":"3.39E-04"},"Plant calmodulin-binding protein-like protein.","AT1G32130","IWS1",770.25,0.69967,0.1795,3.8978,{"v":9.71e-05,"d":"9.71E-05"},{"v":0.00081,"d":"8.10E-04"},"Transcription elongation factor (TFIIS) family protein. The C-terminal portion of this protein has high homology to the C-termini of the IWS1 (Interacts With Spt6) proteins found in yeast and humans. Interacts with transcription factor BES1. Involved in brassinosteroid-regulated gene expression."]
["AT1G30680","ATH",593.06,0.724,0.1493,4.8494,{"v":1.24E-6,"d":"1.24E-06"},{"v":1.06E-5,"d":"1.06E-05"},"toprim domain-containing protein.","AT3G20790",null,239.41,0.84186,0.20492,4.1082,{"v":3.99e-05,"d":"3.99E-05"},{"v":3.39E-4,"d":"3.39E-04"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT3G23070","CFM3A",344.17,-0.78156,0.20057,-3.8968,{"v":9.75e-05,"d":"9.75E-05"},{"v":0.000813,"d":"8.13E-04"},"full_name=CRM family member 3A. CRM family member 3A. Encodes a CRM domain protein CFM3a, involved in group IIB intron splicing in chloroplasts."]
["AT5G27200","ACP5",32.588,-3.273,0.67536,-4.8463,{"v":1.26E-6,"d":"1.26E-06"},{"v":1.07e-05,"d":"1.07E-05"},"full_name=acyl carrier protein 5. acyl carrier protein 5. encodes an acyl carrier protein","AT2G24150","HHP3",526.13,0.78585,0.19137,4.1063,{"v":4.02e-05,"d":"4.02E-05"},{"v":0.000341,"d":"3.41E-04"},"full_name=heptahelical protein 3. heptahelical protein 3. heptahelical transmembrane protein HHP3","AT5G62390","BAG7",1330.8,-0.64465,0.16554,-3.8941,{"v":9.86e-05,"d":"9.86E-05"},{"v":0.00082,"d":"8.20E-04"},"full_name=BCL-2-associated athanogene 7. BCL-2-associated athanogene 7. A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. Localized to the ER. Necessary for the proper maintenance of the unfolded protein response during heat and cold tolerance."]
["AT1G29280","WRKY65",36.006,3.1677,0.65399,4.8437,{"v":1.27e-06,"d":"1.27E-06"},{"v":1.08E-5,"d":"1.08E-05"},"full_name=WRKY DNA-binding protein 65. WRKY DNA-binding protein 65. member of WRKY Transcription Factor; Group II-e","AT5G67030","ABA1",1176.8,-0.75977,0.18527,-4.1009,{"v":4.12e-05,"d":"4.12E-05"},{"v":0.000349,"d":"3.49E-04"},"full_name=ABA DEFICIENT 1. zeaxanthin epoxidase (ZEP) (ABA1). Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.","AT5G08720","HCF145",221.7,0.90476,0.23278,3.8868,{"v":1.02E-4,"d":"1.02E-04"},{"v":0.000844,"d":"8.44E-04"},"polyketide cyclase/dehydrase/lipid transporter."]
["AT1G10930","RECQ4A",325.34,0.98507,0.20369,4.8361,{"v":1.32e-06,"d":"1.32E-06"},{"v":1.12e-05,"d":"1.12E-05"},"DNA helicase (RECQl4A). DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination.","AT1G72570","AIL1",171.85,-1.0645,0.25986,-4.0965,{"v":4.19e-05,"d":"4.19E-05"},{"v":0.000355,"d":"3.55E-04"},"Integrase-type DNA-binding superfamily protein.","AT4G14270",null,2111.2,0.67802,0.17462,3.8828,{"v":1.03E-4,"d":"1.03E-04"},{"v":0.000857,"d":"8.57E-04"},"polyadenylate-binding protein interacting protein. Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins."]
["AT1G03106",null,1124.2,-0.72811,0.15071,-4.8313,{"v":1.36e-06,"d":"1.36E-06"},{"v":1.15E-5,"d":"1.15E-05"},"hypothetical protein.","AT2G45430","AHL22",214.27,0.87686,0.21418,4.094,{"v":4.24e-05,"d":"4.24E-05"},{"v":3.59E-4,"d":"3.59E-04"},"full_name=AT-hook motif nuclear-localized protein 22. AT-hook motif nuclear-localized protein 22. Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.","AT4G34480",null,181.93,1.0284,0.26492,3.8818,{"v":0.000104,"d":"1.04E-04"},{"v":0.000859,"d":"8.59E-04"},"O-Glycosyl hydrolases family 17 protein."]
["AT5G47220","ERF2",343.93,0.87544,0.18154,4.8223,{"v":1.42E-6,"d":"1.42E-06"},{"v":1.2E-5,"d":"1.20E-05"},"full_name=ethylene responsive element binding factor 2. ethylene responsive element binding factor 2. Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box%E2%80%93dependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.","AT4G38410",null,111.92,1.2437,0.304,4.091,{"v":4.29e-05,"d":"4.29E-05"},{"v":0.000362,"d":"3.62E-04"},"Dehydrin family protein.","AT3G15720",null,34.644,-2.3204,0.5984,-3.8776,{"v":1.06E-4,"d":"1.06E-04"},{"v":0.000872,"d":"8.72E-04"},"Pectin lyase-like superfamily protein."]
["AT4G31320","SAUR37",41.954,2.7529,0.5716,4.8161,{"v":1.46E-6,"d":"1.46E-06"},{"v":1.24E-5,"d":"1.24E-05"},"SAUR-like auxin-responsive protein family.","AT3G13080","ABCC3",698.39,0.60324,0.14755,4.0883,{"v":4.35E-5,"d":"4.35E-05"},{"v":0.000366,"d":"3.66E-04"},"full_name=ATP-binding cassette C3. multidrug resistance-associated protein 3. encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.","AT2G41475","ATS3A",327.19,-1.063,0.27427,-3.8756,{"v":1.06E-4,"d":"1.06E-04"},{"v":0.000878,"d":"8.78E-04"},"Embryo-specific protein 3, (ATS3)."]
["AT1G11530","CXXS1",79.7,-1.8375,0.38187,-4.8119,{"v":1.5E-6,"d":"1.50E-06"},{"v":1.26E-5,"d":"1.26E-05"},"full_name=C-terminal cysteine residue is changed to a serine 1. C-terminal cysteine residue is changed to a serine 1. Encodes a monocysteinic thioredoxin, thioredoxin in which the second cysteine of the redox site is replaced by a serine, with low disulfide reductase but efficient disulfide isomerase activity.","AT5G52440","HCF106",889.62,0.61598,0.15081,4.0844,{"v":4.42e-05,"d":"4.42E-05"},{"v":0.000372,"d":"3.72E-04"},"full_name=HIGH CHLOROPHYLL FLUORESCENCE 106. Bacterial sec-independent translocation protein mttA/Hcf106. HCF106; nuclear gene for chloroplast. Thylakoid membrane delta pH translocation pathway component protein; related to Escherichia coli TatA and TatB","AT5G07340",null,463.55,-0.73403,0.18947,-3.874,{"v":1.07E-4,"d":"1.07E-04"},{"v":0.000882,"d":"8.82E-04"},"Calreticulin family protein."]
["AT3G58570","RH52",743.48,-0.67482,0.14026,-4.8113,{"v":1.5E-6,"d":"1.50E-06"},{"v":1.27E-5,"d":"1.27E-05"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT3G17185","TAS3",104.66,1.3433,0.32893,4.084,{"v":4.43e-05,"d":"4.43E-05"},{"v":0.000372,"d":"3.72E-04"},"other_RNA. Encodes a trans-acting siRNA (tasi-RNA) that regulates the expression of auxin response factor genes (ARF2, ARF4, ETT). One of 3 genomic loci that encode the TAS3 siRNA.","AT5G52580",null,370.15,0.77364,0.19971,3.8739,{"v":1.07E-4,"d":"1.07E-04"},{"v":0.000882,"d":"8.82E-04"},"RabGAP/TBC domain-containing protein."]
["AT5G45160","RL2",966.61,-0.61464,0.12781,-4.8089,{"v":1.52e-06,"d":"1.52E-06"},{"v":1.28e-05,"d":"1.28E-05"},"full_name=RHD-like2. Root hair defective 3 GTP-binding protein (RHD3).","AT3G19050","POK2",33.886,2.4209,0.59328,4.0805,{"v":4.49E-5,"d":"4.49E-05"},{"v":3.77E-4,"d":"3.77E-04"},"full_name=phragmoplast orienting kinesin 2. phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls.","AT4G30330","PCP-LIKE",115.59,-1.1675,0.30173,-3.8694,{"v":0.000109,"d":"1.09E-04"},{"v":0.000897,"d":"8.97E-04"},"Small nuclear ribonucleoprotein family protein."]
["AT1G79390",null,634.88,0.65132,0.13561,4.8028,{"v":1.57E-6,"d":"1.57E-06"},{"v":1.32e-05,"d":"1.32E-05"},"centrosomal protein.","AT3G60630","HAM2",315.01,0.79031,0.19382,4.0776,{"v":4.55e-05,"d":"4.55E-05"},{"v":0.000381,"d":"3.81E-04"},"full_name=HAIRY MERISTEM 2. GRAS family transcription factor. Belongs to one of the LOM (LOST MERISTEMS) genes: AT2G45160 (LOM1), AT3G60630 (LOM2) and AT4G00150 (LOM3). LOM1 and LOM2 promote cell differentiation at the periphery of shoot meristems and help to maintain their polar organization.","AT5G54270","LHCB3",5183.2,1.6336,0.42248,3.8666,{"v":1.1E-4,"d":"1.10E-04"},{"v":0.000905,"d":"9.05E-04"},"full_name=light-harvesting chlorophyll B-binding protein 3. light-harvesting chlorophyll B-binding protein 3. Lhcb3 protein is a component of the main light harvesting chlorophyll a/b-protein complex of Photosystem II (LHC II)."]
["AT1G73000","PYL3",63.427,-2.0332,0.42394,-4.7959,{"v":1.62e-06,"d":"1.62E-06"},{"v":1.36E-5,"d":"1.36E-05"},"full_name=PYR1-like 3. PYR1-like 3. Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.","AT4G32940","GAMMA-VPE",650.04,-0.62458,0.15326,-4.0754,{"v":4.59e-05,"d":"4.59E-05"},{"v":0.000384,"d":"3.84E-04"},"full_name=gamma vacuolar processing enzyme. gamma vacuolar processing enzyme. Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death.","AT1G21790",null,60.407,1.616,0.41824,3.8639,{"v":1.12E-4,"d":"1.12E-04"},{"v":0.000914,"d":"9.14E-04"},"TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein."]
["AT3G18090","NRPD2B",200.72,-1.2976,0.27061,-4.7952,{"v":1.63e-06,"d":"1.63E-06"},{"v":1.36E-5,"d":"1.36E-05"},"full_name=nuclear RNA polymerase D2B. nuclear RNA polymerase D2B. Encodes a subunit of RNA polymerase IV (aka RNA polymerase D). NRPD2b is closely related to NRPD2a, but has lower levels of transcription and does not affect endogenous siRNA when mutated.","AT1G05210",null,19.004,3.072,0.75402,4.0742,{"v":4.62e-05,"d":"4.62E-05"},{"v":3.86E-4,"d":"3.86E-04"},"Transmembrane protein 97, Putative.","AT2G32380",null,78.24,-1.3941,0.36118,-3.8598,{"v":1.13E-4,"d":"1.13E-04"},{"v":0.000928,"d":"9.28E-04"},"Transmembrane protein 97, Putative."]
["AT1G51745","SL1",529.65,-0.80721,0.16854,-4.7895,{"v":1.67e-06,"d":"1.67E-06"},{"v":1.4E-5,"d":"1.40E-05"},"Tudor/PWWP/MBT superfamily protein.","AT5G42080","DL1",1303.8,0.59967,0.1474,4.0684,{"v":4.73e-05,"d":"4.73E-05"},{"v":0.000394,"d":"3.94E-04"},"full_name=dynamin-like protein. dynamin-like protein. Encodes a dynamin-like protein related to phragmoplastin. Mutations in this gene, in combination with mutation in ADL1E, result in defects in embryogenesis, cell plate formation and trichome branching. Also controls vascular patterning in combination with VAN3 and GNOM. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.","AT3G14680","CYP72A14",18.765,4.0615,1.0549,3.85,{"v":1.18E-4,"d":"1.18E-04"},{"v":0.000964,"d":"9.64E-04"},"full_name=cytochrome P450, family 72, subfamily A, polypeptide 14. cytochrome P450, family 72, subfamily A, polypeptide 14. putative cytochrome P450"]
["AT3G04170",null,646.5,-6.0151,1.2566,-4.7868,{"v":1.69e-06,"d":"1.69E-06"},{"v":1.42E-5,"d":"1.42E-05"},"RmlC-like cupins superfamily protein.","AT1G78660","GGH1",476,0.93796,0.23068,4.0661,{"v":4.78e-05,"d":"4.78E-05"},{"v":0.000398,"d":"3.98E-04"},"full_name=gamma-glutamyl hydrolase 1. gamma-glutamyl hydrolase 1. The Arabidopsis protein AtGGH1 is a gamma-glutamyl hydrolase cleaving pentaglutamates to yield di- and triglutamates. The enzyme is involved in the tetrahydrofolate metabolism and located to the vacuole.","AT1G22600",null,47.344,1.8678,0.48589,3.844,{"v":1.21E-4,"d":"1.21E-04"},{"v":0.000987,"d":"9.87E-04"},"Late embryogenesis abundant protein (LEA) family protein."]
["AT5G09660","PMDH2",512.67,0.85934,0.1797,4.7822,{"v":1.73E-6,"d":"1.73E-06"},{"v":1.45E-5,"d":"1.45E-05"},"full_name=peroxisomal NAD-malate dehydrogenase 2. peroxisomal NAD-malate dehydrogenase 2. encodes a microbody NAD-dependent malate dehydrogenase encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.","AT1G79470",null,320.43,-0.74321,0.18294,-4.0625,{"v":4.86e-05,"d":"4.86E-05"},{"v":0.000403,"d":"4.03E-04"},"Aldolase-type TIM barrel family protein.","AT5G42900","COR27",900.7,0.68317,0.17792,3.8397,{"v":0.000123,"d":"1.23E-04"},0.0010021,"full_name=cold regulated gene 27. cold regulated protein 27."]
["AT4G20020","MORF1",1210.3,0.56367,0.11792,4.78,{"v":1.75E-6,"d":"1.75E-06"},{"v":1.46e-05,"d":"1.46E-05"},"full_name=multiple organellar RNA editing factor 1. multiple organellar RNA editing factor. Encodes a protein involved in RNA editing in mitochondria.","AT3G21540",null,526.71,-0.62356,0.15351,-4.062,{"v":4.87e-05,"d":"4.87E-05"},{"v":0.000404,"d":"4.04E-04"},"transducin family protein / WD-40 repeat family protein.","AT5G59130",null,647.98,-0.67892,0.17682,-3.8397,{"v":0.000123,"d":"1.23E-04"},0.0010021,"Subtilase family protein."]
["AT3G11410","PP2CA",3614.2,-0.74771,0.15668,-4.7723,{"v":1.82e-06,"d":"1.82E-06"},{"v":1.52E-5,"d":"1.52E-05"},"full_name=protein phosphatase 2CA. protein phosphatase 2CA. Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.","AT2G16370","THY-1",198.14,0.97648,0.24052,4.0599,{"v":4.91e-05,"d":"4.91E-05"},{"v":0.000407,"d":"4.07E-04"},"full_name=thymidylate synthase 1. thymidylate synthase 1. Encodes a bifunctional dihydrofolate reductase - thymidylate synthase gene. This is unique in Arabidopsis and protozoa. Other organisms have independent genes for this function.","AT1G78570","RHM1",1046.9,0.61399,0.15996,3.8384,{"v":0.000124,"d":"1.24E-04"},1.0057E-3,"full_name=rhamnose biosynthesis 1. rhamnose biosynthesis 1. Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in <i>E. coli</i>."]
["AT2G44120",null,5232.4,0.42037,0.088112,4.7708,{"v":1.83e-06,"d":"1.83E-06"},{"v":1.52E-5,"d":"1.52E-05"},"Ribosomal protein L30/L7 family protein.","AT2G43880",null,9.2373,7.0888,1.7475,4.0566,{"v":4.98e-05,"d":"4.98E-05"},{"v":0.000412,"d":"4.12E-04"},"Pectin lyase-like superfamily protein.","AT2G40590",null,581.13,-0.72208,0.18818,-3.8371,{"v":1.25E-4,"d":"1.25E-04"},1.0088E-3,"Ribosomal protein S26e family protein."]
["AT2G40030","NRPD1B",411.17,-0.89272,0.18755,-4.7598,{"v":1.94e-06,"d":"1.94E-06"},{"v":1.61e-05,"d":"1.61E-05"},"full_name=nuclear RNA polymerase D1B. nuclear RNA polymerase D1B. Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing.","AT1G44170","ALDH3H1",437.06,-0.66264,0.16367,-4.0487,{"v":5.15e-05,"d":"5.15E-05"},{"v":0.000425,"d":"4.25E-04"},"full_name=aldehyde dehydrogenase 3H1. aldehyde dehydrogenase 3H1. Encodes an aldehyde dehydrogenase induced by ABA and dehydration that can oxidize saturated aliphatic aldehydes. It is also able to oxidize beta-unsaturated aldehydes, but not aromatic aldehydes. Activity of ALDH3H1 is NAD +-dependent.","AT2G30770","CYP71A13",103.39,-1.2189,0.31774,-3.836,{"v":1.25E-4,"d":"1.25E-04"},0.0010116,"full_name=cytochrome P450, family 71, subfamily A, polypeptide 13. cytochrome P450 family 71 polypeptide. putative cytochrome P450"]
["AT3G14630","CYP72A9",18.04,-7.6671,1.611,-4.7592,{"v":1.94e-06,"d":"1.94E-06"},{"v":1.61e-05,"d":"1.61E-05"},"full_name=cytochrome P450, family 72, subfamily A, polypeptide 9. cytochrome P450, family 72, subfamily A, polypeptide 9. putative cytochrome P450","AT5G40340","PDP3",598.82,-1.0527,0.26005,-4.0481,{"v":5.16e-05,"d":"5.16E-05"},{"v":4.26E-4,"d":"4.26E-04"},"Tudor/PWWP/MBT superfamily protein.","AT2G43210",null,477.93,0.67783,0.17681,3.8336,{"v":1.26E-4,"d":"1.26E-04"},0.0010205,"Ubiquitin-like superfamily protein."]
["AT2G01770","VIT1",101.57,-1.7382,0.36535,-4.7575,{"v":1.96e-06,"d":"1.96E-06"},{"v":1.62e-05,"d":"1.62E-05"},"full_name=vacuolar iron transporter 1. vacuolar iron transporter 1. Encodes an iron transporter required for iron sequestration into vacuoles. Expressed in developing embryo and seed. Localized in the vacuolar membrane.","AT1G11000","MLO4",76.684,1.5277,0.37768,4.045,{"v":5.23e-05,"d":"5.23E-05"},{"v":0.000431,"d":"4.31E-04"},"full_name=MILDEW RESISTANCE LOCUS O 4. Seven transmembrane MLO family protein. A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO4 belongs to the clade I, with AtMLO11 and AtMLO14. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of root, cotyledons and young leaves, it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).","AT4G00860","ATOZI1",482.14,-0.74299,0.19399,-3.8301,{"v":0.000128,"d":"1.28E-04"},1.0337E-3,"monopolar spindle protein (DUF1138). putative pathogenesis-related protein whose transcript level is induced in response to ozone and pathogenic Pseudomonas strains."]
["AT1G28580",null,647.7,0.75589,0.15906,4.7524,{"v":2.01e-06,"d":"2.01E-06"},{"v":1.66E-5,"d":"1.66E-05"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT1G54957",null,12.705,-6.6846,1.6553,-4.0383,{"v":5.38E-5,"d":"5.38E-05"},{"v":0.000442,"d":"4.42E-04"},"transmembrane protein.","AT3G61100",null,53.838,-1.668,0.4358,-3.8276,{"v":0.000129,"d":"1.29E-04"},0.0010422,"Putative endonuclease or glycosyl hydrolase."]
["AT5G03150","JKD",210.28,-1.1242,0.23681,-4.7472,{"v":2.06e-06,"d":"2.06E-06"},{"v":1.7E-5,"d":"1.70E-05"},"full_name=JACKDAW. C2H2-like zinc finger protein. JKD is a nuclear-localized putative transcription factor with three zinc finger domains. jkd mutants show a number of root patterning defects including ectopic periclinal divisions in the cortex, increased cell numbers in the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. jkd mutants also have a reduced number of meristematic cells in their roots. JKD can interact with the SCR and SHR proteins implicated in root patterning, as well as another zinc finger transcription factor, MAGPIE. All of these interactions require the first zinc finger in JKD according to a Y2H assay. There are also transcriptional interactions among these proteins. The initiation of JKD transcription does not appear to depend on SCR and SHR, but later expression in the post-embryonic QC cells and ground tissue initials is reduced in scr and shr mutants. JKD also appears to be required for SCR transcription beginning in the embryo. There is also some evidence that JKD plays a role in promoting the movement of SHR into the nucleus, particularly in QC cells, but this may be indirect.","AT3G14550","GGPS3",46.026,1.7915,0.444,4.0348,{"v":5.46e-05,"d":"5.46E-05"},{"v":0.000448,"d":"4.48E-04"},"full_name=geranylgeranyl pyrophosphate synthase 3. geranylgeranyl pyrophosphate synthase 3. Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots.","AT5G41070","DRB5",199.22,-0.97008,0.25353,-3.8263,{"v":0.00013,"d":"1.30E-04"},1.0456E-3,"full_name=dsRNA-binding protein 5. dsRNA-binding protein 5. Encodes a double-stranded RNA binding protein."]
["AT5G39740","RPL5B",8926.1,0.38942,0.082044,4.7465,{"v":2.07e-06,"d":"2.07E-06"},{"v":1.7E-5,"d":"1.70E-05"},"full_name=ribosomal protein L5 B. ribosomal protein L5 B. Encodes a ribosomal protein RPL5B that is involved in ribosome biogenesis and plays a role in organ size control by promoting cell proliferation and preventing compensation in normal leaf development.","AT3G04630","WDL1",202.81,0.87729,0.21759,4.0318,{"v":5.53e-05,"d":"5.53E-05"},{"v":0.000454,"d":"4.54E-04"},"full_name=WVD2-like 1. WVD2-like 1. Member of a small gene family which have a KLEEK domain which may be involved in protein- protein interactions. Over expression of WDL1 results in abnormal root development.","AT1G68050","FKF1",440.69,0.77344,0.20215,3.8261,{"v":0.00013,"d":"1.30E-04"},0.0010458,"full_name=flavin-binding, kelch repeat, f box 1. flavin-binding, kelch repeat, f box 1. Encodes FKF1, a flavin-binding kelch repeat F box protein, is clock-controlled, regulates transition to flowering. Forms a complex with GI on the CO promoter to regulate CO expression."]
["AT5G04740","ACR12",455.9,0.7424,0.15663,4.7399,{"v":2.14e-06,"d":"2.14E-06"},{"v":1.76e-05,"d":"1.76E-05"},"full_name=ACT domain repeats 12. ACT domain-containing protein. Encodes a ACT domain-containing protein. The ACT domain, named after bacterial aspartate kinase, chorismate mutase and TyrA (prephenate dehydrogenase), is a regulatory domain that serves as an amino acid-binding site in feedback-regulated amino acid metabolic enzymes.","AT4G31650",null,360.11,0.69814,0.17324,4.03,{"v":5.58e-05,"d":"5.58E-05"},{"v":4.57E-4,"d":"4.57E-04"},"Transcriptional factor B3 family protein.","AT5G10910","CMAL",160.28,-1.0563,0.27628,-3.8234,{"v":0.000132,"d":"1.32E-04"},0.0010557,"mraW methylase family protein."]
["AT3G09350","Fes1A",354.68,0.81274,0.17178,4.7312,{"v":2.23e-06,"d":"2.23E-06"},{"v":1.83e-05,"d":"1.83E-05"},"full_name=Fes1A. Fes1A. Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70. Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance. Does not have nucleotide exchange factor activity in vitro.","AT2G46790","PRR9",98.718,-1.4054,0.34887,-4.0285,{"v":5.61e-05,"d":"5.61E-05"},{"v":0.000459,"d":"4.59E-04"},"full_name=pseudo-response regulator 9. pseudo-response regulator 9. Pseudo-response regulator PRR9. Involved in clock function. PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR9. Interact with TOC1 in a yeast two-hybrid assay. Acts as transcriptional repressor of CCA1 and LHY.","AT3G56330","TRM1C",44.231,-1.9207,0.50263,-3.8213,{"v":0.000133,"d":"1.33E-04"},1.0628E-3,"N2,N2-dimethylguanosine tRNA methyltransferase."]
["AT4G37430","CYP91A2",700.25,-0.74867,0.15842,-4.7259,{"v":2.29e-06,"d":"2.29E-06"},{"v":1.87e-05,"d":"1.87E-05"},"full_name=cytochrome P450, family 91, subfamily A, polypeptide 2. cytochrome P450, family 91, subfamily A, polypeptide 2. Encodes a member of the CYP81F cytochrome P450 monooxygenase subfamily.","AT1G01250",null,48.139,-1.9607,0.48721,-4.0244,{"v":5.71e-05,"d":"5.71E-05"},{"v":4.66E-4,"d":"4.66E-04"},"Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.","AT5G39720","AIG2L",17.97,4.0018,1.0488,3.8156,{"v":1.36E-4,"d":"1.36E-04"},1.0857E-3,"full_name=avirulence induced gene 2 like protein. avirulence induced protein 2 like protein."]
["AT5G28750",null,428.69,0.77726,0.16457,4.723,{"v":2.32e-06,"d":"2.32E-06"},{"v":1.9e-05,"d":"1.90E-05"},"Bacterial sec-independent translocation protein mttA/Hcf106.","AT4G33360","FLDH",135.5,1.1766,0.29256,4.0218,{"v":5.78e-05,"d":"5.78E-05"},{"v":0.000471,"d":"4.71E-04"},"full_name=farnesol dehydrogenase. NAD(P)-binding Rossmann-fold superfamily protein. Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.","AT5G06440",null,334.26,0.75751,0.19857,3.8148,{"v":1.36E-4,"d":"1.36E-04"},0.0010879,"polyketide cyclase/dehydrase/lipid transport superfamily protein."]
["AT3G17020",null,2351.3,-0.42513,0.09003,-4.7221,{"v":2.33e-06,"d":"2.33E-06"},{"v":1.91E-5,"d":"1.91E-05"},"Adenine nucleotide alpha hydrolases-like superfamily protein.","AT1G55490","CPN60B",8343.6,0.44372,0.11048,4.0161,{"v":5.92e-05,"d":"5.92E-05"},{"v":0.000481,"d":"4.81E-04"},"full_name=chaperonin 60 beta. chaperonin 60 beta. encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. The protein has molecular chaperone activity for suppressing protein aggregation in vitro.","AT5G32440",null,686.5,0.64645,0.16959,3.8118,{"v":0.000138,"d":"1.38E-04"},0.0010996,"Ubiquitin system component Cue protein."]
["AT1G43675",null,63.875,1.9142,0.40565,4.7188,{"v":2.37e-06,"d":"2.37E-06"},{"v":1.93e-05,"d":"1.93E-05"},"transposable_element_gene. similarity to non-LTR retroelement protein","AT5G45580",null,55.451,1.8277,0.45583,4.0096,{"v":6.08e-05,"d":"6.08E-05"},{"v":0.000494,"d":"4.94E-04"},"Homeodomain-like superfamily protein.","AT5G08430",null,286.64,0.80585,0.2117,3.8065,{"v":0.000141,"d":"1.41E-04"},0.0011211,"SWIB/MDM2 and Plus-3 and GYF domain-containing protein."]
["AT5G54970",null,184.83,1.3074,0.27746,4.7122,{"v":2.45e-06,"d":"2.45E-06"},{"v":1.99e-05,"d":"1.99E-05"},"hypothetical protein.","AT3G11730","ATFP8",621.34,-0.58325,0.14552,-4.0079,{"v":6.13e-05,"d":"6.13E-05"},{"v":0.000496,"d":"4.96E-04"},"Ras-related small GTP-binding family protein. Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. It has also been identified as an isoprenylated protein.","AT1G13960","WRKY4",261.93,0.96906,0.2552,3.7973,{"v":1.46E-4,"d":"1.46E-04"},0.0011618,"full_name=WRKY DNA-binding protein 4. WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4)."]
["AT4G23750","CRF2",514.02,1.0168,0.21586,4.7106,{"v":2.47e-06,"d":"2.47E-06"},{"v":2.01e-05,"d":"2.01E-05"},"full_name=cytokinin response factor 2. cytokinin response factor 2. encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Monopteros target gene.","AT4G22820","SAP9",314.53,-0.77215,0.1928,-4.005,{"v":6.2e-05,"d":"6.20E-05"},{"v":0.000502,"d":"5.02E-04"},"A20/AN1-like zinc finger family protein.","AT1G17680",null,308.64,0.76898,0.20252,3.797,{"v":1.46E-4,"d":"1.46E-04"},0.0011628,"tetratricopeptide repeat (TPR)-containing protein."]
["AT1G12080",null,33.093,-4.316,0.91668,-4.7083,{"v":2.5e-06,"d":"2.50E-06"},{"v":2.03e-05,"d":"2.03E-05"},"Vacuolar calcium-binding protein-like protein.","AT5G14210",null,279.67,0.78827,0.19688,4.0037,{"v":6.24e-05,"d":"6.24E-05"},{"v":5.04E-4,"d":"5.04E-04"},"Leucine-rich repeat protein kinase family protein.","AT5G49700","AHL17",193.99,-0.91458,0.24121,-3.7916,{"v":0.00015,"d":"1.50E-04"},0.0011865,"Putative AT-hook DNA-binding family protein."]
["AT3G44320","NIT3",254.35,0.96099,0.2043,4.7038,{"v":2.55e-06,"d":"2.55E-06"},{"v":2.07e-05,"d":"2.07E-05"},"full_name=nitrilase 3. nitrilase 3. This enzyme catalyzes the hydrolysis of indole-3-acetonitrile (IAN) to indole-3-acetic acid (IAA) (EC 3.5.5.1) and IAN to indole-3-acetamide (IAM) at lower levels. It is the only one of the four Arabidopsis nitrilases whose mRNA levels are strongly induced when plants experience sulphur deprivation. This enzyme likely participates in other non-auxin-related metabolic pathways.","AT4G24330",null,776.73,0.52566,0.13144,3.9994,{"v":6.35e-05,"d":"6.35E-05"},{"v":5.13E-4,"d":"5.13E-04"},"hypothetical protein (DUF1682).","AT2G42620","MAX2",199.02,0.97897,0.25831,3.7899,{"v":0.000151,"d":"1.51E-04"},1.1925E-3,"full_name=MORE AXILLARY BRANCHES 2. RNI-like superfamily protein. The mutations at MAX2 cause increased hypocotyl and petiole elongation in light-grown seedlings. Positional cloning identifies MAX2 as a member of the F-box leucine-rich repeat family of proteins. MAX2 is identical to ORE9, a proposed regulator of leaf senescence. Involved in positive regulation of light responses."]
["AT1G23310","GGT1",1653.7,0.47031,0.10001,4.7025,{"v":2.57E-6,"d":"2.57E-06"},{"v":2.08e-05,"d":"2.08E-05"},"full_name=glutamate:glyoxylate aminotransferase. glutamate:glyoxylate aminotransferase. Identified by cloning the gene that corresponded to a purified protein having glyoxylate aminotransferase activity. Localized to the peroxisome and thought to be involved in photorespiration/ metabolic salvage pathway.","AT5G62610",null,337.2,0.73363,0.18348,3.9984,{"v":6.38e-05,"d":"6.38E-05"},{"v":0.000514,"d":"5.14E-04"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT2G28290","SYD",1063.9,0.5998,0.15831,3.7888,{"v":0.000151,"d":"1.51E-04"},0.0011962,"full_name=SPLAYED. P-loop containing nucleoside triphosphate hydrolases superfamily protein. Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity."]
["AT5G01630","BRCA2B",120.22,1.3401,0.28513,4.7,{"v":2.6e-06,"d":"2.60E-06"},{"v":2.1e-05,"d":"2.10E-05"},"full_name=BRCA2-like B. BRCA2-like B. Ortholog of breast cancer susceptibility protein 2. Essential at meiosis. Interacts with with both Rad51 and Dss1(I) or both Dmc1 and Dss1(I) in a tripartite complex.","AT1G05450",null,12.559,-6.664,1.6673,-3.9969,{"v":6.42e-05,"d":"6.42E-05"},{"v":0.000517,"d":"5.17E-04"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein. Encodes a Protease inhibitor/seed storage/LTP family protein","AT1G78510","SPS1",203.08,0.93227,0.24614,3.7876,{"v":0.000152,"d":"1.52E-04"},1.201E-3,"full_name=solanesyl diphosphate synthase 1. solanesyl diphosphate synthase 1. Encodes one of the two paralogous solanesyl diphosphate synthases - SPS1 (At1g78510) and SPS2 (At1g17050) - that assemble the side-chain of plastoquinone-9 in plastids."]
["AT1G43780","scpl44",19.141,7.6617,1.6327,4.6927,{"v":2.7E-6,"d":"2.70E-06"},{"v":2.17e-05,"d":"2.17E-05"},"full_name=serine carboxypeptidase-like 44. serine carboxypeptidase-like 44.","AT5G10550","GTE2",756.55,0.70145,0.17571,3.9921,{"v":6.55e-05,"d":"6.55E-05"},{"v":0.000526,"d":"5.26E-04"},"full_name=global transcription factor group E2. global transcription factor group E2. This gene is predicted to encode a bromodomain-containing protein. A plant line expressing RNAi constructs targeted against GTE7 shows some resistance to agrobacterium-mediated root transformation.","AT3G51895","SULTR3;1",74.884,1.5082,0.39859,3.7837,{"v":1.55E-4,"d":"1.55E-04"},0.0012165,"full_name=sulfate transporter 3;1. sulfate transporter 3;1. Encodes a chloroplast-localized sulfate transporter."]
["AT3G52240",null,483.37,-0.77616,0.16545,-4.6913,{"v":2.72e-06,"d":"2.72E-06"},{"v":2.19E-5,"d":"2.19E-05"},"transcriptional regulator ATRX.","AT5G52960",null,350.79,0.92602,0.23205,3.9905,{"v":6.59e-05,"d":"6.59E-05"},{"v":0.000529,"d":"5.29E-04"},"tRNA dimethylallyltransferase.","AT3G06740","GATA15",52.521,-1.7063,0.45137,-3.7803,{"v":0.000157,"d":"1.57E-04"},1.2319E-3,"full_name=GATA transcription factor 15. GATA transcription factor 15. Encodes a member of the GATA factor family of zinc finger transcription factors."]
["AT1G78915",null,103.96,1.4336,0.30582,4.6876,{"v":2.76e-06,"d":"2.76E-06"},{"v":2.22e-05,"d":"2.22E-05"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT3G07500","FRF2",104.89,-1.2369,0.31013,-3.9883,{"v":6.66e-05,"d":"6.66E-05"},{"v":0.000533,"d":"5.33E-04"},"Far-red impaired responsive (FAR1) family protein.","AT5G51810","GA20OX2",55.34,-1.6619,0.43986,-3.7782,{"v":0.000158,"d":"1.58E-04"},1.2404E-3,"full_name=gibberellin 20 oxidase 2. gibberellin 20 oxidase 2. Encodes gibberellin 20-oxidase. Involved in gibberellin biosynthesis. Up-regulated by far red light in elongating petioles. Not regulated by a circadian clock."]
["AT1G61340","FBS1",91.768,1.5828,0.33778,4.6861,{"v":2.79E-6,"d":"2.79E-06"},{"v":2.24e-05,"d":"2.24E-05"},"full_name=F-box stress induced 1. F-box family protein. Encodes a F-box protein induced by various biotic or abiotic stress.","AT5G44190","GLK2",375.72,-0.74504,0.18685,-3.9873,{"v":6.68e-05,"d":"6.68E-05"},{"v":0.000535,"d":"5.35E-04"},"full_name=GOLDEN2-like 2. GOLDEN2-like 2. Encodes GLK2, Golden2-like 2, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK1, Golden2-like 1, is encoded by At2g20570. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.","AT3G54680",null,415.79,0.76315,0.20205,3.777,{"v":0.000159,"d":"1.59E-04"},1.2454E-3,"proteophosphoglycan-like protein."]
["AT1G21410","SKP2A",284.88,-1.0299,0.21991,-4.6834,{"v":2.82e-06,"d":"2.82E-06"},{"v":2.26E-5,"d":"2.26E-05"},"F-box/RNI-like superfamily protein. AtSKP2;1 is a homolog of human SKP2, the human F-box protein that recruits E2F1. Contains an F-box motif at the N-terminal region and a C-terminal Leu-rich repeat domain. Forms part of an E3-ubiquitin-ligase SCF (Skp1, cullin, F-box) complex and recruits phosphorylated AtE2Fc, a transcriptional factor that might play a role in cell division and during the transition from skotomorphogenesis to photomorphogenesis. AtSKP2;1 (At1g21410) and AtSKP2;2 (At1g77000) may be duplicated genes.","AT3G46060","RABE1c",905,0.57755,0.14497,3.9839,{"v":6.78e-05,"d":"6.78E-05"},{"v":0.000542,"d":"5.42E-04"},"RAB GTPase homolog 8A. small GTP-binding protein (ara-3)","AT4G26620",null,316.65,0.79911,0.21169,3.775,{"v":0.00016,"d":"1.60E-04"},1.2537E-3,"Sucrase/ferredoxin-like family protein."]
["AT3G01520",null,1109.6,-0.58279,0.12455,-4.6791,{"v":2.88E-6,"d":"2.88E-06"},{"v":2.31e-05,"d":"2.31E-05"},"Adenine nucleotide alpha hydrolases-like superfamily protein.","AT2G37450","UMAMIT13",122.74,1.0992,0.27628,3.9786,{"v":6.93e-05,"d":"6.93E-05"},{"v":5.53E-4,"d":"5.53E-04"},"full_name=Usually multiple acids move in and out Transporters 13. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT3G13470","Cpn60beta2",1650.5,-0.54604,0.1448,-3.771,{"v":1.63E-4,"d":"1.63E-04"},1.271E-3,"full_name=chaperonin-60beta2. TCP-1/cpn60 chaperonin family protein. Encodes a subunit of chloroplasts chaperonins that are involved in mediating the folding of newly synthesized, translocated, or stress-denatured proteins. Cpn60 subunits are: Cpn60alpha1 (At2g28000), AtCpn60alpha2 (At5g18820), AtCpn60beta1 (At1g55490), AtCpn60beta2 (At3g13470), AtCpn60beta3 (At5g56500), AtCpn60beta4 (At1g26230)."]
["AT3G46780","PTAC16",165.89,-1.396,0.29877,-4.6724,{"v":2.98e-06,"d":"2.98E-06"},{"v":2.38e-05,"d":"2.38E-05"},"full_name=plastid transcriptionally active 16. plastid transcriptionally active 16.","AT1G11190","BFN1",67.09,-1.8033,0.45337,-3.9776,{"v":6.96e-05,"d":"6.96E-05"},{"v":0.000555,"d":"5.55E-04"},"full_name=bifunctional nuclease i. bifunctional nuclease i. Encodes a bifunctional nuclease that acts on both RNA and DNA involved in nucleic acid degradation to facilitate nucleotide and phosphate recovery during senescence. It has mismatch-specific endonuclease activity with wide recognition of single base mismatches as well as the ability to cleave indel types of mismatches (heteroduplexes with loops).","AT1G71030","MYBL2",46.514,-1.7803,0.47237,-3.7689,{"v":1.64E-4,"d":"1.64E-04"},1.2802E-3,"full_name=MYB-like 2. MYB-like 2. Encodes a putative myb family transcription factor. In contrast to most other myb-like proteins its myb domain consists of a single repeat. A proline-rich region potentially involved in transactivation is found in the C-terminal part of the protein. Its transcript accumulates mainly in leaves."]
["AT3G24630","TRM34",175.14,-1.1792,0.25242,-4.6717,{"v":2.99e-06,"d":"2.99E-06"},{"v":2.39e-05,"d":"2.39E-05"},"full_name=TON1 Recruiting Motif 34. hypothetical protein.","AT2G33070","NSP2",185.53,-3.7031,0.93131,-3.9762,{"v":7e-05,"d":"7.00E-05"},{"v":0.000557,"d":"5.57E-04"},"full_name=nitrile specifier protein 2. nitrile specifier protein 2. Encodes a nitrile-specifier protein NSP2. NSP2 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation.","AT5G23860","TUB8",62.349,-1.5229,0.40427,-3.767,{"v":1.65E-4,"d":"1.65E-04"},0.0012891,"full_name=tubulin beta 8. tubulin beta 8. beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers."]
["AT1G01910","GET3A",703.27,-0.6045,0.12965,-4.6624,{"v":3.13e-06,"d":"3.13E-06"},{"v":2.49e-05,"d":"2.49E-05"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT4G14615",null,1152.7,-0.51137,0.12879,-3.9707,{"v":7.17e-05,"d":"7.17E-05"},{"v":0.000569,"d":"5.69E-04"},"sporulation-specific protein.","AT5G19330","ARIA",889.77,0.55588,0.14771,3.7632,{"v":0.000168,"d":"1.68E-04"},0.0013052,"full_name=ARM repeat protein interacting with ABF2. ARM repeat protein interacting with ABF2. Encodes an armadillo repeat protein involved in the abscisic acid response. The protein interacts with a transcription factor, ABF2, which controls ABA-dependent gene expression via the G-box-type ABA-responsive elements."]
["AT3G58530",null,182.57,1.1488,0.2466,4.6587,{"v":3.18E-6,"d":"3.18E-06"},{"v":2.53e-05,"d":"2.53E-05"},"RNI-like superfamily protein.","AT2G36380","ABCG34",1402.7,-0.55972,0.1411,-3.9668,{"v":7.28e-05,"d":"7.28E-05"},{"v":0.000578,"d":"5.78E-04"},"full_name=ATP-binding cassette G34. pleiotropic drug resistance 6.","AT5G20160",null,836.06,-0.62249,0.16552,-3.7608,{"v":0.000169,"d":"1.69E-04"},0.0013163,"Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein."]
["AT3G44340","CEF",1328.4,-0.56012,0.12032,-4.655,{"v":3.24e-06,"d":"3.24E-06"},{"v":2.58E-5,"d":"2.58E-05"},"full_name=clone eighty-four. hypothetical protein. homologous to yeast and animal Sec24 proteins; expression in yeast cells enhances their survival under oxidative stress conditions.","AT1G56190","CPGK2",620.15,0.55964,0.14118,3.9641,{"v":7.37e-05,"d":"7.37E-05"},{"v":0.000584,"d":"5.84E-04"},"Phosphoglycerate kinase family protein.","AT1G14410","WHY1",214.95,-0.96563,0.2569,-3.7587,{"v":0.000171,"d":"1.71E-04"},1.3262E-3,"full_name=WHIRLY 1. ssDNA-binding transcriptional regulator. Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length."]
["AT3G03060","SBA1",326.61,0.93417,0.20081,4.652,{"v":3.29e-06,"d":"3.29E-06"},{"v":2.61e-05,"d":"2.61E-05"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT4G38800","MTN1",1361.5,0.47528,0.11999,3.9611,{"v":7.46e-05,"d":"7.46E-05"},{"v":0.00059,"d":"5.90E-04"},"full_name=methylthioadenosine nucleosidase 1. methylthioadenosine nucleosidase 1. Encodes one of the 5'-methylthioadenosine nucleosidases (AT4G38800/MTN1; AT4G34840/MTN2). Double mutant, mtn1-1mtn2-1, retains approximately 14% of the MTN enzyme activity present in the wild type and displays a pleiotropic phenotype that includes altered vasculature and impaired fertility.","AT5G66680","DGL1",951.09,-0.5492,0.14621,-3.7561,{"v":1.73E-4,"d":"1.73E-04"},0.0013383,"full_name=DEFECTIVE GLYCOSYLATION. dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein. Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins."]
["AT2G43750","OASB",2186.4,0.47892,0.10302,4.6488,{"v":3.34e-06,"d":"3.34E-06"},{"v":2.65E-5,"d":"2.65E-05"},"full_name=O-acetylserine (thiol) lyase B. O-acetylserine (thiol) lyase B. Arabidopsis thaliana O-acetylserine (thiol) lyase (OAS-TL) isoform oasB, the key enzyme for fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. Required for pollen tube growth and/or fertilization.","AT1G74690","IQD31",914.09,0.51782,0.13083,3.9578,{"v":7.56e-05,"d":"7.56E-05"},{"v":0.000597,"d":"5.97E-04"},"full_name=IQ-domain 31. IQ-domain 31. Encodes a microtubule-associated protein.","AT5G24200",null,31.05,-2.2174,0.59095,-3.7522,{"v":1.75E-4,"d":"1.75E-04"},0.0013569,"alpha/beta-Hydrolases superfamily protein."]
["AT5G44785","OSB3",698.3,0.60799,0.13089,4.6451,{"v":3.4e-06,"d":"3.40E-06"},{"v":2.69E-5,"d":"2.69E-05"},"full_name=organellar single-stranded DNA binding protein 3. organellar single-stranded DNA binding protein 3.","AT3G26932","DRB3",422.26,0.76394,0.1933,3.9521,{"v":7.75E-5,"d":"7.75E-05"},{"v":6.11E-4,"d":"6.11E-04"},"full_name=dsRNA-binding protein 3. dsRNA-binding protein 3.","AT1G76130","AMY2",82.166,1.3216,0.35244,3.75,{"v":0.000177,"d":"1.77E-04"},0.0013669,"full_name=alpha-amylase-like 2. alpha-amylase-like 2. alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative, strong similarity to alpha-amylase GI:7532799 from (Malus x domestica);contains Pfam profile PF00128: Alpha amylase, catalytic domain. Predicted to be secreted based on SignalP analysis."]
["AT1G07920","ELONGATION FACTOR-TU FAMILY",9944.6,0.3549,0.076454,4.6421,{"v":3.45E-6,"d":"3.45E-06"},{"v":2.73E-5,"d":"2.73E-05"},"GTP binding Elongation factor Tu family protein.","AT3G25040","ERD2B",455.72,0.78206,0.19798,3.9501,{"v":7.81e-05,"d":"7.81E-05"},{"v":0.000615,"d":"6.15E-04"},"full_name=endoplasmic reticulum retention defective 2B. endoplasmic reticulum retention defective 2B. Encodes ERD2b. a homolog of the yeast endoplasmic reticulum retention receptor ERD2. Mutations in ERD2b compromise EFR but not FLS2 signaling.","AT3G11420",null,260.35,0.82022,0.21881,3.7485,{"v":0.000178,"d":"1.78E-04"},0.0013716,"beta-1,3-N-acetylglucosaminyltransferase lunatic protein, putative (DUF604)."]
["AT5G58370","ENGB-3",240.11,0.94842,0.20444,4.6392,{"v":3.5e-06,"d":"3.50E-06"},{"v":2.76E-5,"d":"2.76E-05"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT5G16110",null,645.29,0.57208,0.14492,3.9475,{"v":7.9e-05,"d":"7.90E-05"},{"v":0.000621,"d":"6.21E-04"},"hypothetical protein.","AT3G09770","LOG2",375.66,0.70554,0.18835,3.7459,{"v":0.00018,"d":"1.80E-04"},1.3854E-3,"full_name=LOSS OF GDU 2. RING/U-box superfamily protein. Encodes a ubiquitin E3 ligase LOG2 (LOSS OF GDU2). Required for GLUTAMINE DUMPER1(GDU1)-induced amino secretion."]
["AT1G33810",null,356.01,0.843,0.18191,4.6342,{"v":3.58E-6,"d":"3.58E-06"},{"v":2.83E-5,"d":"2.83E-05"},"zinc finger/BTB domain protein.","AT3G60930",null,246.05,1.03,0.26104,3.9456,{"v":7.96e-05,"d":"7.96E-05"},{"v":0.000625,"d":"6.25E-04"},"transposable_element_gene.","AT1G77760","NIA1",173.89,1.0529,0.28113,3.7451,{"v":0.00018,"d":"1.80E-04"},0.0013879,"full_name=nitrate reductase 1. nitrate reductase 1. Encodes the cytosolic minor isoform of nitrate reductase (NR). Involved in the first step of nitrate assimilation, it contributes about 15% of the nitrate reductase activity in shoots. Similar to molybdopterin oxidoreductases at the N-terminus, and to FAD/NAD-binding cytochrome reductases at the C-terminus. Cofactors: FAD, heme iron (cytochrome B-557), and molybdenum-pterin."]
["AT1G17650","GLYR2",728.49,0.59445,0.12836,4.631,{"v":3.64e-06,"d":"3.64E-06"},{"v":2.86e-05,"d":"2.86E-05"},"full_name=glyoxylate reductase 2. glyoxylate reductase 2. Glyoxylate reductase located in chloroplasts.","AT2G37260","TTG2",294.13,0.89133,0.22623,3.94,{"v":8.15e-05,"d":"8.15E-05"},{"v":0.000639,"d":"6.39E-04"},"full_name=TRANSPARENT TESTA GLABRA 2. WRKY family transcription factor family protein. Encodes a protein similar to WRKY transcription factors that is expressed in the seed integument and endosperm. Mutants are defective in proanthocyanidin synthesis and seed mucilate deposition. Seeds are yellow colored. Seed size is also affected; seeds are reduced in size but only when the mutant allele is transmitted through the female parent.Loss of function alleles are associated with a reduction in interploidy lethality.","AT3G09560","PAH1",321.3,0.75223,0.20099,3.7427,{"v":0.000182,"d":"1.82E-04"},0.0013986,"full_name=PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1. Lipin family protein. The PAH1 gene encodes a phosphatidate phosphohydrolase. Mutant analysis revealed its involvement in galactolipid synthesis pathway, and the membrane lipid remodeling. The pah1pah2 double-mutant showed enhanced Al-susceptibility under low-P conditions, but there was no significant differences in Al tolerance between pah1pah2 and wild type when they were grown in a solution containing 35 &#956;M Pi."]
["AT3G55360","CER10",911.74,-0.55192,0.11925,-4.6283,{"v":3.69e-06,"d":"3.69E-06"},{"v":2.9E-5,"d":"2.90E-05"},"full_name=ECERIFERUM 10. 3-oxo-5-alpha-steroid 4-dehydrogenase family protein. Enoyl-CoA reductase is involved in all very long chain fatty acids (VLCFA) elongation reactions that are required for cuticular wax, storage lipid and sphingolipid metabolism. The protein is located in the ER, but in contrast to its yeast homolog TSC13 is not particularly enriched in the nuclear envelope-vacuole junction. Mutants in this gene show abnormal organ morphology and stem glossiness. Cells in all tissues are only about 1/3 of the size of wild type cells. The morphological changes are most likely to result from the reduction in the VLCFA content of sphingolipids. Mutants also show abnormalities in the endocytic membrane organization and transport.","AT3G27090",null,758.11,0.53944,0.13718,3.9324,{"v":8.41e-05,"d":"8.41E-05"},{"v":0.000658,"d":"6.58E-04"},"DCD (Development and Cell Death) domain protein.","AT3G02190",null,154.47,-1.0344,0.27673,-3.7379,{"v":0.000186,"d":"1.86E-04"},1.4227E-3,"Ribosomal protein L39 family protein."]
["AT2G43030","PRPL3",2589.4,0.42032,0.090848,4.6266,{"v":3.72E-6,"d":"3.72E-06"},{"v":2.92e-05,"d":"2.92E-05"},"Ribosomal protein L3 family protein.","AT2G18440","GUT15",4790.6,0.45496,0.11571,3.9321,{"v":8.42E-5,"d":"8.42E-05"},{"v":0.000659,"d":"6.59E-04"},"other_RNA. Encodes a noncoding RNA, a member of an emerging class of transcripts that lack significant open reading frames and encode RNA as their final product.","AT3G15357",null,101.05,-1.2007,0.32127,-3.7372,{"v":0.000186,"d":"1.86E-04"},1.4261E-3,"phosphopantothenoylcysteine decarboxylase subunit."]
["AT1G14360","UTR3",239.7,-0.93798,0.20289,-4.6231,{"v":3.78e-06,"d":"3.78E-06"},{"v":2.96e-05,"d":"2.96E-05"},"full_name=UDP-galactose transporter 3. UDP-galactose transporter 3.","AT5G15410","DND1",183.92,-0.91724,0.23346,-3.9289,{"v":8.53E-5,"d":"8.53E-05"},{"v":0.000666,"d":"6.66E-04"},"full_name=DEFENSE NO DEATH 1. Cyclic nucleotide-regulated ion channel family protein. 'defense, no death' gene (DND1) encodes a mutated cyclic nucleotide-gated cation channel; Same as CNGC2 (article ID 229): Cyclic nucleotide gated channel, activated by cAMP, conducts K+ and other monovalent cations but excludes Na+, does not contain the GYG amino acid sequence found in other channels with this conductivity profile. Conducts Ca2+ into cells which is linked to the generation of NO and the NO signaling pathway involved in the innate immune response to pathogens.","AT1G12500",null,62.08,-1.5485,0.41459,-3.735,{"v":0.000188,"d":"1.88E-04"},0.0014365,"Nucleotide-sugar transporter family protein."]
["AT5G65590","SCAP1",348.83,-0.8498,0.1839,-4.6209,{"v":3.82e-06,"d":"3.82E-06"},{"v":2.99e-05,"d":"2.99E-05"},"Dof-type zinc finger DNA-binding family protein. Encodes a plant-specific Dof-type transcription factor expressed in maturing guard cells, but not in guard mother cells. It regulates essential processes of stomatal guard cell maturation and functions as a key transcription factor regulating the final stages of guard cell differentiation.","AT5G40760","G6PD6",467.41,-0.76583,0.19499,-3.9274,{"v":8.59e-05,"d":"8.59E-05"},{"v":6.69E-4,"d":"6.69E-04"},"full_name=glucose-6-phosphate dehydrogenase 6. glucose-6-phosphate dehydrogenase 6. Encodes a cytosolic glucose-6-phosphate dehydrogenase that is insensitive to reduction by DTT and whose mRNA is expressed ubiquitously.","AT5G55180",null,138.77,1.2588,0.33733,3.7316,{"v":0.00019,"d":"1.90E-04"},1.4537E-3,"O-Glycosyl hydrolases family 17 protein."]
["AT1G45616","RLP6",56.723,1.9586,0.42421,4.6171,{"v":3.89E-6,"d":"3.89E-06"},{"v":3.04E-5,"d":"3.04E-05"},"full_name=receptor like protein 6. receptor like protein 6.","AT5G60530",null,17.573,3.9959,1.0191,3.921,{"v":8.82e-05,"d":"8.82E-05"},{"v":0.000686,"d":"6.86E-04"},"late embryogenesis abundant protein-related / LEA protein-like protein.","AT5G57010",null,8.7181,6.5591,1.7603,3.7261,{"v":1.94E-4,"d":"1.94E-04"},1.4828E-3,"calmodulin-binding family protein."]
["AT1G57720",null,6472.1,0.3858,0.08361,4.6143,{"v":3.94e-06,"d":"3.94E-06"},{"v":3.08e-05,"d":"3.08E-05"},"Translation elongation factor EF1B, gamma chain.","AT1G21740",null,293.07,0.72977,0.18624,3.9185,{"v":8.91e-05,"d":"8.91E-05"},{"v":0.000692,"d":"6.92E-04"},"DUF630 family protein, putative (DUF630 and DUF632).","AT5G04470","SIM",75.738,-1.4198,0.38123,-3.7242,{"v":0.000196,"d":"1.96E-04"},1.4927E-3,"full_name=SIAMESE. cyclin-dependent protein kinase inhibitor. Encodes a novel nuclear 14-kD protein containing a cyclin binding motif and a motif found in ICK/KRP cell cycle inhibitor proteins. It is required for coordinating cell division and cell differentiation during the development of Arabidopsis trichomes, playing a key role in the mitosis-to-endoreduplication transition. It interacts with D-type cyclins in vivo."]
["AT4G20010","PTAC9",388.15,0.79558,0.1725,4.6121,{"v":3.99e-06,"d":"3.99E-06"},{"v":3.11e-05,"d":"3.11E-05"},"full_name=plastid transcriptionally active 9. plastid transcriptionally active 9.","AT5G49680",null,110.47,1.1309,0.28872,3.9169,{"v":8.97e-05,"d":"8.97E-05"},{"v":6.96E-4,"d":"6.96E-04"},"SABRE-like protein. Conserved among eukaryotes, similar to Arabidopsis SABRE. The phenotype of the kip/sab double mutant suggests related functions for both genes, however, the KIP protein is mostly required for tip-growth. Predicted to be targeted to the secretory pathway. mRNA was detected in all organs, with most abundance in pollen and roots.","AT1G61860","PBL41",29.005,2.3984,0.64445,3.7216,{"v":0.000198,"d":"1.98E-04"},0.0015063,"Protein kinase superfamily protein."]
["AT5G23010","MAM1",16.249,-7.5161,1.6302,-4.6105,{"v":4.02e-06,"d":"4.02E-06"},{"v":3.12e-05,"d":"3.12E-05"},"full_name=methylthioalkylmalate synthase 1. methylthioalkylmalate synthase 1. Encodes a methylthioalkylmalate synthase, catalyzes the condensation reactions of the first two rounds of methionine chain elongation in the biosynthesis of methionine-derived glucosinolates.","AT4G20830","ATBBE19",309.43,-0.75546,0.19312,-3.9118,{"v":9.16e-05,"d":"9.16E-05"},{"v":0.00071,"d":"7.10E-04"},"FAD-binding Berberine family protein.","AT4G26000","PEP",393.83,0.70454,0.18947,3.7185,{"v":0.0002,"d":"2.00E-04"},0.0015215,"full_name=PEPPER. RNA-binding KH domain-containing protein. Encodes a novel Arabidopsis gene encoding a polypeptide with K-homology (KH) RNA-binding modules, which acts on vegetative growth and pistil development. Genetic studies suggest that PEP interacts with element(s) of the CLAVATA signaling pathway."]
["AT2G30080","ZIP6",70.942,-1.7166,0.37267,-4.6061,{"v":4.1e-06,"d":"4.10E-06"},{"v":3.19e-05,"d":"3.19E-05"},"ZIP metal ion transporter family. member of Fe(II) transporter isolog family. Gene expression is not regulated by iron, copper, or zinc deficiency or excess.","AT5G41140",null,139.32,1.0381,0.2656,3.9085,{"v":9.29e-05,"d":"9.29E-05"},{"v":7.18E-4,"d":"7.18E-04"},"Myosin heavy chain-related protein.","AT3G53900","UPP",167.08,-0.96876,0.26079,-3.7148,{"v":2.03E-4,"d":"2.03E-04"},0.0015418,"full_name=uracil phosphoribosyltransferase. uracil phosphoribosyltransferase. Encodes UPP, a plastidial uracil phosphoribosyltransferase (UPRT) involved in uracil salvage. Loss-of-function mutation causes dramatic growth retardation, a pale-green to albino phenotype, abnormal root morphology and chloroplastic disorders."]
["AT2G24490","RPA2",162.65,1.172,0.25449,4.6052,{"v":4.12e-06,"d":"4.12E-06"},{"v":3.2e-05,"d":"3.20E-05"},"full_name=replicon protein A2. replicon protein A2. Encodes a component of Replication Protein A. Component of transcriptional gene silencing which does not affect endogenous small RNA accumulation nor DNA methylation. Localized in the nucleus. Involved in DNA repair. Interacts physically with ROS1.","AT5G14060","CARAB-AK-LYS",363.68,0.68242,0.1746,3.9084,{"v":9.29e-05,"d":"9.29E-05"},{"v":7.18E-4,"d":"7.18E-04"},"Aspartate kinase family protein. lysine-sensitive aspartate kinase","AT2G38170","CAX1",507.68,0.68937,0.18562,3.714,{"v":2.04E-4,"d":"2.04E-04"},0.001546,"full_name=cation exchanger 1. cation exchanger 1. Encodes a high affinity vacuolar calcium antiporter. The residue His 338 is critical to Ca2+ transport activity. Disruption of CAX1 reduces manganese and zinc of shoot tissue and results in a decrease in the activity of vacuolar V-type proton ATPase."]
["AT3G59100","GSL11",238.26,1.0028,0.21787,4.6025,{"v":4.17e-06,"d":"4.17E-06"},{"v":3.24e-05,"d":"3.24E-05"},"full_name=glucan synthase-like 11. glucan synthase-like 11. encodes a protein similar to callose synthase","AT5G11720","AGLU1",418.42,0.68226,0.17478,3.9036,{"v":9.48E-5,"d":"9.48E-05"},{"v":0.000732,"d":"7.32E-04"},"Glycosyl hydrolases family 31 protein.","AT1G55320","AAE18",205.83,0.88617,0.2387,3.7125,{"v":2.05E-4,"d":"2.05E-04"},0.001553,"full_name=acyl-activating enzyme 18. acyl-activating enzyme 18. Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins."]
["AT3G04930",null,593.17,-0.71387,0.15526,-4.598,{"v":4.27e-06,"d":"4.27E-06"},{"v":3.3e-05,"d":"3.30E-05"},"DNA-binding storekeeper protein-related transcriptional regulator.","AT5G50420",null,134.27,1.0688,0.27407,3.8999,{"v":9.63e-05,"d":"9.63E-05"},{"v":0.000742,"d":"7.42E-04"},"O-fucosyltransferase family protein.","AT4G31790",null,168.9,-1.015,0.27351,-3.7109,{"v":0.000207,"d":"2.07E-04"},1.5597E-3,"Tetrapyrrole (Corrin/Porphyrin) Methylase."]
["AT5G46740","UBP21",144.61,1.2407,0.26995,4.596,{"v":4.31e-06,"d":"4.31E-06"},{"v":3.33e-05,"d":"3.33E-05"},"full_name=ubiquitin-specific protease 21. ubiquitin-specific protease 21. Encodes a ubiquitin-specific protease.","AT1G28410",null,161.6,0.9417,0.2416,3.8978,{"v":9.71e-05,"d":"9.71E-05"},{"v":0.000747,"d":"7.47E-04"},"myosin heavy chain-like protein.","AT3G54540","ABCF4",939.33,0.5599,0.15094,3.7094,{"v":0.000208,"d":"2.08E-04"},1.5669E-3,"full_name=ATP-binding cassette F4. general control non-repressible 4. member of GCN subfamily"]
["AT1G12320",null,83.896,1.6163,0.35182,4.5942,{"v":4.34E-6,"d":"4.34E-06"},{"v":3.35e-05,"d":"3.35E-05"},"ankyrin repeat/KH domain protein (DUF1442).","AT1G12600",null,29.17,-2.7711,0.71148,-3.8948,{"v":9.83e-05,"d":"9.83E-05"},{"v":0.000756,"d":"7.56E-04"},"UDP-N-acetylglucosamine (UAA) transporter family.","AT1G53470","MSL4",372.05,0.82182,0.22159,3.7087,{"v":0.000208,"d":"2.08E-04"},0.0015702,"full_name=mechanosensitive channel of small conductance-like 4. mechanosensitive channel of small conductance-like 4."]
["AT1G33560","ADR1",250.17,-0.92241,0.20092,-4.591,{"v":4.41e-06,"d":"4.41E-06"},{"v":3.4E-5,"d":"3.40E-05"},"full_name=ACTIVATED DISEASE RESISTANCE 1. Disease resistance protein (CC-NBS-LRR class) family. Encodes a NBS-LRR disease resistance protein that possesses N-terminal kinase subdomains. Activation tagged mutant of ADR1 showed elevated levels of SA and reactive oxygen species in addition to number of defense gene transcripts. Exhibits resistance to number of microbial pathogens.","AT2G25870","ATYBEY",573.06,0.57901,0.14887,3.8893,{"v":1.01E-4,"d":"1.01E-04"},{"v":0.000771,"d":"7.71E-04"},"haloacid dehalogenase-like hydrolase family protein.","AT4G35260","IDH1",321.96,-0.74905,0.20218,-3.7049,{"v":2.12E-4,"d":"2.12E-04"},0.0015902,"full_name=isocitrate dehydrogenase 1. isocitrate dehydrogenase 1. Encodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase."]
["AT3G24040",null,257.61,-0.91392,0.19919,-4.5882,{"v":4.47e-06,"d":"4.47E-06"},{"v":3.44e-05,"d":"3.44E-05"},"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein.","AT3G25980","MAD2",33.612,2.071,0.53256,3.8887,{"v":1.01E-4,"d":"1.01E-04"},{"v":0.000772,"d":"7.72E-04"},"full_name=MITOTIC ARREST-DEFICIENT 2. DNA-binding HORMA family protein. Encodes MAD2 (MITOTIC ARREST-DEFICIENT 2). May have the spindle assembly checkpoint protein functions conserved from yeast to humans.","AT1G03600","PSB27",1205.6,0.56083,0.15145,3.703,{"v":2.13E-4,"d":"2.13E-04"},0.0015993,"photosystem II family protein."]
["AT4G35750",null,1415.9,-0.62641,0.13657,-4.5867,{"v":4.5e-06,"d":"4.50E-06"},{"v":3.46e-05,"d":"3.46E-05"},"SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein.","AT5G50960","NBP35",498.13,-0.67432,0.17347,-3.8871,{"v":1.01E-4,"d":"1.01E-04"},{"v":0.000777,"d":"7.77E-04"},"full_name=nucleotide binding protein 35. nucleotide binding protein 35. Highly similar to Saccharomyces cerevisiae NBP35, locus YGL091C. Cytosolic protein that homodimerizes and can assemble both 4Fe-4S - type and 2Fe-2S - type clusters on its amino terminal and carboxy therminal respectively. Null mutants are embryo lethal.","AT1G50010","TUA2",2372.5,-0.50529,0.13647,-3.7025,{"v":2.13E-4,"d":"2.13E-04"},1.6017E-3,"full_name=tubulin alpha-2 chain. tubulin alpha-2 chain. Encodes alpha-2,4 tubulin. TUA2 and TUA4 encode identical proteins."]
["AT2G25540","CESA10",209.43,-0.99513,0.2172,-4.5816,{"v":4.61e-06,"d":"4.61E-06"},{"v":3.54E-5,"d":"3.54E-05"},"full_name=cellulose synthase 10. cellulose synthase A catalytic subunit 3 UDP-forming-like protein. cellulose synthase","AT2G27430",null,50.59,1.6657,0.42868,3.8857,{"v":1.02E-4,"d":"1.02E-04"},{"v":0.00078,"d":"7.80E-04"},"ARM repeat superfamily protein.","AT1G07070",null,182.37,-0.91048,0.24594,-3.702,{"v":2.14E-4,"d":"2.14E-04"},1.6033E-3,"Ribosomal protein L35Ae family protein."]
["AT2G47940","DEG2",1587.9,0.49457,0.10806,4.5771,{"v":4.72e-06,"d":"4.72E-06"},{"v":3.61e-05,"d":"3.61E-05"},"full_name=degradation of periplasmic proteins 2. DEGP protease 2. Encodes DegP2 protease (DEGP2); nuclear gene for chloroplast product.","AT5G63380",null,31.454,2.1173,0.54542,3.8819,{"v":0.000104,"d":"1.04E-04"},{"v":0.000791,"d":"7.91E-04"},"AMP-dependent synthetase and ligase family protein. Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At5g63380 preferentially activates fatty acids with increased chain length (C9:0 to C8:0) and thus shares characteristics with long-chain fatty acyl-CoA synthases. Also able to catalyze the conversion of OPDA to its CoA ester and is therefore thought to be involved in the peroxisomal &#946;-oxidation steps of jasmonic acid biosynthesis.","AT4G13170",null,565.98,-0.75229,0.20343,-3.698,{"v":0.000217,"d":"2.17E-04"},0.0016258,"Ribosomal protein L13 family protein."]
["AT1G26880",null,2280.4,0.42587,0.09308,4.5753,{"v":4.76e-06,"d":"4.76E-06"},{"v":3.64e-05,"d":"3.64E-05"},"Ribosomal protein L34e superfamily protein.","AT5G21160","LARP1a",943.01,-0.52828,0.13633,-3.8751,{"v":1.07E-4,"d":"1.07E-04"},{"v":8.12E-4,"d":"8.12E-04"},"full_name=La related protein 1a. LA RNA-binding protein. Encodes a protein with sequence similarity to mRNA binding proteins from humans. LARP1a is involved in mRNA degradation in response to heat stress. Upon heat stress LARP1a interacts with XRN4 and appears to be responsible for addressing XRN4 to the polysome. LARP1/XRN4 double mutants are impaired in thermotolerance and lower levels of heat induced RNA turnover.","AT4G32160",null,319.42,0.74799,0.20238,3.6959,{"v":0.000219,"d":"2.19E-04"},1.6362E-3,"Phox (PX) domain-containing protein."]
["AT1G31730","AP4E",1339.8,-0.51137,0.11183,-4.5729,{"v":4.81e-06,"d":"4.81E-06"},{"v":3.68E-5,"d":"3.68E-05"},"Adaptin family protein.","AT3G56100","MRLK",25.565,2.5391,0.65535,3.8744,{"v":1.07E-4,"d":"1.07E-04"},{"v":0.000813,"d":"8.13E-04"},"full_name=meristematic receptor-like kinase. meristematic receptor-like kinase. Protein kinase expressed in meristematic cells. Phosphorylates AGL24.","AT3G53110","LOS4",959.32,0.56565,0.15311,3.6943,{"v":0.000221,"d":"2.21E-04"},0.0016444,"full_name=LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4. P-loop containing nucleoside triphosphate hydrolases superfamily protein. Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA."]
["AT3G62690","ATL5",114.24,-1.408,0.30796,-4.572,{"v":4.83e-06,"d":"4.83E-06"},{"v":3.69e-05,"d":"3.69E-05"},"full_name=AtL5. AtL5. Encodes a RING-H2 zinc finger protein related to ATL2. The ATL gene family is represented by fifteen sequences that contain, in addition to the RING, a transmembrane domain which is located in most of them towards the N-terminal end.","AT4G28410","RSA1",70.054,1.5096,0.38969,3.8737,{"v":1.07E-4,"d":"1.07E-04"},{"v":0.000815,"d":"8.15E-04"},"Tyrosine transaminase family protein.","AT3G62760","ATGSTF13",76.356,-1.3525,0.36626,-3.6926,{"v":2.22E-4,"d":"2.22E-04"},0.0016541,"Glutathione S-transferase family protein. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002)."]
["AT5G59340","WOX2",22.5,-4.9699,1.0884,-4.5663,{"v":4.96e-06,"d":"4.96E-06"},{"v":3.78e-05,"d":"3.78E-05"},"full_name=WUSCHEL related homeobox 2. WUSCHEL related homeobox 2. Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. WOX2 has a putative Zinc finger domain downstream of the homeodomain. Transcripts are expressed in the egg cell, the zygote and the apical cell lineage and are reduced in met3-1 early embryos. This gene is necessary for cell divisions that form the apical embryo domain.","AT4G31830",null,557.87,-2.517,0.65035,-3.8703,{"v":0.000109,"d":"1.09E-04"},{"v":8.25E-4,"d":"8.25E-04"},"transmembrane protein.","AT1G03905","ABCI19",80.066,1.3544,0.36693,3.6911,{"v":2.23E-4,"d":"2.23E-04"},1.6596E-3,"full_name=ATP-binding cassette I19. P-loop containing nucleoside triphosphate hydrolases superfamily protein."]
["AT4G36220","FAH1",4359.1,-0.42538,0.093205,-4.5639,{"v":5.02e-06,"d":"5.02E-06"},{"v":3.82E-5,"d":"3.82E-05"},"full_name=ferulic acid 5-hydroxylase 1. ferulic acid 5-hydroxylase 1. encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.","AT1G56220",null,4004,-0.37634,0.097307,-3.8675,{"v":1.1E-4,"d":"1.10E-04"},{"v":0.000833,"d":"8.33E-04"},"Dormancy/auxin associated family protein.","AT1G09660",null,257.05,-0.84146,0.2281,-3.6889,{"v":0.000225,"d":"2.25E-04"},1.6722E-3,"RNA-binding KH domain-containing protein."]
["AT3G61770","VPS30",137.82,1.3569,0.29731,4.5637,{"v":5.03e-06,"d":"5.03E-06"},{"v":3.82E-5,"d":"3.82E-05"},"Acid phosphatase/vanadium-dependent haloperoxidase-related protein.","AT2G41430","ERD15",2326,0.42453,0.10981,3.866,{"v":1.11E-4,"d":"1.11E-04"},{"v":0.000837,"d":"8.37E-04"},"full_name=EARLY RESPONSIVE TO DEHYDRATION 15. dehydration-induced protein (ERD15). Encodes hydrophilic protein lacking Cys residues that is expressed in response to drought stress, light stress and treatment with plant-growth-promoting rhizobacteria (Paenibacillus polymyxa), possibly revealing a connection between responses to biotic and abiotic stress. Also identified as a CTC Interacting Domain (CID) protein in a yeast two hybrid screen using the PAB2 protein as bait. Contains PAM2 like domain which mediates interaction with PABC domain in PAB2.","AT3G21720","ICL",83156,0.42909,0.11644,3.685,{"v":0.000229,"d":"2.29E-04"},1.6964E-3,"full_name=isocitrate lyase. isocitrate lyase. Encodes a glyoxylate cycle enzyme isocitrate lyase (ICL)."]
["AT4G10450",null,1144,0.58523,0.12826,4.5629,{"v":5.04E-6,"d":"5.04E-06"},{"v":3.83e-05,"d":"3.83E-05"},"Ribosomal protein L6 family.","AT1G64860","SIGA",314.83,0.70697,0.18292,3.8649,{"v":1.11E-4,"d":"1.11E-04"},{"v":0.00084,"d":"8.40E-04"},"full_name=sigma factor A. sigma factor A. Subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme","AT5G65270","RABA4a",165.18,-0.97048,0.26378,-3.6791,{"v":2.34E-4,"d":"2.34E-04"},0.0017341,"full_name=RAB GTPase homolog A4A. RAB GTPase homolog A4A."]
["AT5G13510","EMB3136",1202.8,0.5298,0.11616,4.5609,{"v":5.09e-06,"d":"5.09E-06"},{"v":3.86e-05,"d":"3.86E-05"},"full_name=EMBRYO DEFECTIVE 3136. Ribosomal protein L10 family protein.","AT1G49050","APCB1",107.33,1.1212,0.29028,3.8624,{"v":1.12E-4,"d":"1.12E-04"},{"v":0.000847,"d":"8.47E-04"},"Eukaryotic aspartyl protease family protein.","AT5G16840","BPA1",661.89,0.57591,0.15663,3.677,{"v":0.000236,"d":"2.36E-04"},0.0017455,"full_name=binding partner of acd11 1. binding partner of acd11 1."]
["AT4G32760",null,1080.9,-0.55716,0.12224,-4.5577,{"v":5.17e-06,"d":"5.17E-06"},{"v":3.91e-05,"d":"3.91E-05"},"ENTH/VHS/GAT family protein.","AT1G23950",null,352.84,-0.897,0.23244,-3.8591,{"v":0.000114,"d":"1.14E-04"},{"v":0.000858,"d":"8.58E-04"},"hypothetical protein (DUF626).","AT3G15880","WSIP2",742.11,0.61236,0.1666,3.6755,{"v":0.000237,"d":"2.37E-04"},0.0017531,"full_name=WUS-interacting protein 2. WUS-interacting protein 2."]
["AT3G24480",null,162.73,-1.1058,0.24319,-4.5471,{"v":5.44e-06,"d":"5.44E-06"},{"v":4.11e-05,"d":"4.11E-05"},"Leucine-rich repeat (LRR) family protein.","AT2G43910","HOL1",97.685,1.1731,0.30428,3.8553,{"v":1.16E-4,"d":"1.16E-04"},{"v":0.000869,"d":"8.69E-04"},"full_name=HARMLESS TO OZONE LAYER 1. HARMLESS TO OZONE LAYER 1.","AT5G43560","MUSE14",511.02,0.65515,0.17859,3.6685,{"v":0.000244,"d":"2.44E-04"},1.7981E-3,"TRAF-like superfamily protein."]
["AT5G02970",null,300.08,-0.98824,0.2176,-4.5417,{"v":5.58e-06,"d":"5.58E-06"},{"v":4.21E-5,"d":"4.21E-05"},"alpha/beta-Hydrolases superfamily protein.","AT3G15240",null,323.82,0.69044,0.17916,3.8537,{"v":1.16E-4,"d":"1.16E-04"},{"v":0.000874,"d":"8.74E-04"},"Serine/threonine-protein kinase WNK (With No Lysine)-like protein.","AT3G11960",null,448.6,0.65162,0.17777,3.6655,{"v":0.000247,"d":"2.47E-04"},1.817E-3,"Cleavage and polyadenylation specificity factor (CPSF) A subunit protein."]
["AT5G60410","SIZ1",960.23,-0.52729,0.11613,-4.5405,{"v":5.61e-06,"d":"5.61E-06"},{"v":4.23e-05,"d":"4.23E-05"},"DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein. Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling","AT5G06860","PGIP1",118.92,-1.1538,0.29961,-3.851,{"v":1.18E-4,"d":"1.18E-04"},{"v":8.83E-4,"d":"8.83E-04"},"full_name=polygalacturonase inhibiting protein 1. polygalacturonase inhibiting protein 1. Encodes a polygalacturonase inhibiting protein involved in defense response. PGIPs inhibit the function of cell wall pectin degrading enzymes such as those produced by fungal pathogens. PGIP1 is induced by fungal infection. Suppressed in the proton sensitive stop1-mutant, but the transcription level was recovered by transformation of STOP2. Knockout mutant showed severe damage in the root tip in low Ca and low pH medium.","AT3G15530",null,282.99,-0.9357,0.25533,-3.6647,{"v":0.000248,"d":"2.48E-04"},0.0018218,"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein."]
["AT3G24830",null,6422.5,0.39262,0.08656,4.5358,{"v":5.74e-06,"d":"5.74E-06"},{"v":4.32E-5,"d":"4.32E-05"},"Ribosomal protein L13 family protein.","AT1G02730","CSLD5",65.89,1.4393,0.37398,3.8485,{"v":0.000119,"d":"1.19E-04"},{"v":0.00089,"d":"8.90E-04"},"full_name=cellulose synthase-like D5. cellulose synthase-like D5. Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.","AT5G01700",null,32.364,2.1508,0.58714,3.6631,{"v":0.000249,"d":"2.49E-04"},1.8295E-3,"Protein phosphatase 2C family protein."]
["AT2G40920",null,292.4,0.8665,0.19132,4.5292,{"v":5.92e-06,"d":"5.92E-06"},{"v":4.45e-05,"d":"4.45E-05"},"F-box and associated interaction domains-containing protein.","AT5G54800","GPT1",618.16,-0.64073,0.16656,-3.8468,{"v":1.2E-4,"d":"1.20E-04"},{"v":0.000895,"d":"8.95E-04"},"full_name=glucose 6-phosphate/phosphate translocator 1. glucose 6-phosphate/phosphate translocator 1. Encodes glucose6-Phosphate/phosphate transporter 1. Essential for pollen maturation and embryo sac development.","AT3G12830","SAUR72",31.943,2.1051,0.57496,3.6613,{"v":0.000251,"d":"2.51E-04"},0.0018397,"SAUR-like auxin-responsive protein family."]
["AT4G22217",null,19.893,7.7186,1.7046,4.528,{"v":5.95e-06,"d":"5.95E-06"},{"v":4.47e-05,"d":"4.47E-05"},"defensin-like protein. Encodes a defensin-like (DEFL) family protein.","AT5G47490",null,406.78,0.66942,0.17402,3.8468,{"v":1.2E-4,"d":"1.20E-04"},{"v":0.000895,"d":"8.95E-04"},"RGPR-like protein.","AT5G26860","LON1",416.84,-0.72154,0.19708,-3.6611,{"v":0.000251,"d":"2.51E-04"},0.0018401,"full_name=lon protease 1. lon protease 1. Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins."]
["AT1G19220","ARF19",159.95,-1.3195,0.2915,-4.5266,{"v":6e-06,"d":"6.00E-06"},{"v":4.49E-5,"d":"4.49E-05"},"full_name=auxin response factor 19. auxin response factor 19. Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.","AT4G04460","PASPA3",39.082,-2.0256,0.52707,-3.8431,{"v":1.21E-4,"d":"1.21E-04"},{"v":0.000907,"d":"9.07E-04"},"Saposin-like aspartyl protease family protein.","AT5G35200","PICALM3",220.4,0.83435,0.22809,3.658,{"v":0.000254,"d":"2.54E-04"},0.0018596,"ENTH/ANTH/VHS superfamily protein."]
["AT3G15590",null,1136.1,0.52841,0.11686,4.5219,{"v":6.13e-06,"d":"6.13E-06"},{"v":4.58e-05,"d":"4.58E-05"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT1G80370","CYCA2;4",19.185,2.8289,0.73644,3.8413,{"v":1.22E-4,"d":"1.22E-04"},{"v":0.000912,"d":"9.12E-04"},"full_name=Cyclin A2;4. Cyclin A2;4. Encodes a A2-type cyclin. Contributes to the fine-tuning of local proliferation during plant development.","AT2G46450","CNGC12",353.33,-0.77482,0.21191,-3.6564,{"v":0.000256,"d":"2.56E-04"},0.001868,"full_name=cyclic nucleotide-gated channel 12. cyclic nucleotide-gated channel 12. Member of Cyclic nucleotide gated channel family.Positive regulator of resistance against avirulent fungal pathogen.Suppresses the phenotype conferred by cpr22 in a dosage-dependent manner."]
["AT1G73010","PS2",421.89,0.81013,0.1792,4.5209,{"v":6.16e-06,"d":"6.16E-06"},{"v":4.6E-5,"d":"4.60E-05"},"full_name=phosphate starvation-induced gene 2. inorganic pyrophosphatase 1. Encodes PPsPase1, a pyrophosphate-specific phosphatase catalyzing the specific cleavage of pyrophosphate (Km 38.8 uM) with an alkaline catalytic pH optimum. Expression is upregulated in the shoot of cax1/cax3 mutant.","AT4G01730",null,18.88,2.9227,0.76146,3.8383,{"v":0.000124,"d":"1.24E-04"},{"v":0.000921,"d":"9.21E-04"},"DHHC-type zinc finger family protein.","AT5G41685",null,318.77,-0.83025,0.22748,-3.6498,{"v":0.000262,"d":"2.62E-04"},1.9134E-3,"Mitochondrial outer membrane translocase complex, subunit Tom7."]
["AT1G28340","RLP4",852.54,-0.56918,0.12597,-4.5185,{"v":6.23e-06,"d":"6.23E-06"},{"v":4.65e-05,"d":"4.65E-05"},"full_name=receptor like protein 4. receptor like protein 4.","AT1G30500","NF-YA7",237.4,-0.89276,0.23272,-3.8362,{"v":1.25E-4,"d":"1.25E-04"},{"v":0.000928,"d":"9.28E-04"},"full_name=nuclear factor Y, subunit A7. nuclear factor Y, subunit A7.","AT3G20395","ATL92",38.438,-2.1987,0.60289,-3.647,{"v":0.000265,"d":"2.65E-04"},0.001932,"RING/U-box superfamily protein."]
["AT5G15090","VDAC3",3355.8,0.40602,0.089912,4.5158,{"v":6.31e-06,"d":"6.31E-06"},{"v":4.7e-05,"d":"4.70E-05"},"full_name=voltage dependent anion channel 3. voltage dependent anion channel 3. Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. Purified VDAC3 is shown to have voltage-dependent anion channel activity.","AT1G62750","SCO1",2081.6,0.45263,0.11804,3.8344,{"v":1.26E-4,"d":"1.26E-04"},{"v":0.000934,"d":"9.34E-04"},"full_name=SNOWY COTYLEDON 1. Translation elongation factor EFG/EF2 protein. Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants.","AT3G24080",null,365.56,-0.97878,0.26848,-3.6457,{"v":0.000267,"d":"2.67E-04"},0.0019404,"KRR1 family protein."]
["AT3G06435",null,450.51,-0.81548,0.18079,-4.5106,{"v":6.46E-6,"d":"6.46E-06"},{"v":4.81e-05,"d":"4.81E-05"},"Expressed protein.","AT5G57050","ABI2",643.72,-0.75974,0.19831,-3.8311,{"v":0.000128,"d":"1.28E-04"},{"v":0.000945,"d":"9.45E-04"},"full_name=ABA INSENSITIVE 2. Protein phosphatase 2C family protein. Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.","AT5G62370",null,34.579,-2.0086,0.55118,-3.6442,{"v":0.000268,"d":"2.68E-04"},0.0019477,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT4G15210","BAM5",5836.9,-0.48977,0.1087,-4.5055,{"v":6.62e-06,"d":"6.62E-06"},{"v":4.92e-05,"d":"4.92E-05"},"full_name=beta-amylase 5. beta-amylase 5. cytosolic beta-amylase expressed in rosette leaves and inducible by sugar. RAM1 mutants have reduced beta amylase in leaves and stems.","AT4G14500",null,419.2,0.67534,0.17646,3.8272,{"v":0.00013,"d":"1.30E-04"},{"v":9.59E-4,"d":"9.59E-04"},"Polyketide cyclase/dehydrase and lipid transport superfamily protein.","AT1G09740",null,78.969,1.3167,0.36148,3.6424,{"v":2.7E-4,"d":"2.70E-04"},0.0019581,"Adenine nucleotide alpha hydrolases-like superfamily protein."]
["AT3G22620","LTPG20",75.147,-1.8813,0.41757,-4.5053,{"v":6.63E-6,"d":"6.63E-06"},{"v":4.92e-05,"d":"4.92E-05"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT2G44200",null,258.61,-0.78521,0.2052,-3.8266,{"v":0.00013,"d":"1.30E-04"},{"v":0.000961,"d":"9.61E-04"},"pre-mRNA splicing factor domain-containing protein.","AT5G60210","RIP5",247.45,-0.86188,0.23664,-3.6421,{"v":2.7E-4,"d":"2.70E-04"},0.0019595,"full_name=ROP interactive partner 5. ROP interactive partner 5. Encodes RIP5 (ROP interactive partner 5), a putative Rho protein effector, interacting specifically with the active form of ROPs (Rho proteins of plants)."]
["AT1G07310",null,488.74,-0.7058,0.15682,-4.5007,{"v":6.77e-06,"d":"6.77E-06"},{"v":5.02E-5,"d":"5.02E-05"},"Calcium-dependent lipid-binding (CaLB domain) family protein.","AT3G46670","UGT76E11",229.93,-0.81721,0.21362,-3.8256,{"v":0.00013,"d":"1.30E-04"},{"v":0.000963,"d":"9.63E-04"},"full_name=UDP-glucosyl transferase 76E11. UDP-glucosyl transferase 76E11.","AT4G14980",null,56.195,-1.8698,0.51352,-3.6412,{"v":0.000271,"d":"2.71E-04"},0.0019627,"Cysteine/Histidine-rich C1 domain family protein."]
["AT4G35770","SEN1",70.496,2.2766,0.50641,4.4955,{"v":6.94e-06,"d":"6.94E-06"},{"v":5.14e-05,"d":"5.14E-05"},"full_name=SENESCENCE 1. Rhodanese/Cell cycle control phosphatase superfamily protein. Senescence-associated gene that is strongly induced by phosphate starvation. Transcripts are differentially regulated at the level of mRNA stability at different times of day. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant.","AT3G23760",null,131.03,1.0646,0.27836,3.8245,{"v":0.000131,"d":"1.31E-04"},{"v":0.000966,"d":"9.66E-04"},"transferring glycosyl group transferase.","AT3G55770","WLIM2b",825.68,0.54948,0.15093,3.6407,{"v":2.72E-4,"d":"2.72E-04"},0.0019645,"full_name=WLIM2b. GATA type zinc finger transcription factor family protein. Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization."]
["AT1G53920","GLIP5",33.271,2.6259,0.58453,4.4922,{"v":7.05e-06,"d":"7.05E-06"},{"v":5.21e-05,"d":"5.21E-05"},"full_name=GDSL-motif lipase 5. GDSL-motif lipase 5. Contains lipase signature motif and GDSL domain.","AT5G37720","ALY4",539.26,-0.61568,0.16111,-3.8215,{"v":0.000133,"d":"1.33E-04"},{"v":9.77E-4,"d":"9.77E-04"},"full_name=ALWAYS EARLY 4. ALWAYS EARLY 4.","AT1G28360","ERF12",81.149,1.3317,0.36621,3.6365,{"v":0.000276,"d":"2.76E-04"},1.9941E-3,"full_name=ERF domain protein 12. ERF domain protein 12. encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ERF12). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole."]
["AT4G33520","PAA1",352.58,0.93353,0.20786,4.4912,{"v":7.08E-6,"d":"7.08E-06"},{"v":5.23e-05,"d":"5.23E-05"},"full_name=P-type ATP-ase 1. P-type ATP-ase 1. Encodes a putative metal-transporting P-type ATPase.","AT1G01680","PUB54",36.514,2.2975,0.60163,3.8188,{"v":1.34E-4,"d":"1.34E-04"},{"v":0.000987,"d":"9.87E-04"},"full_name=plant U-box 54. plant U-box 54.","AT5G44290",null,322.38,0.71754,0.19741,3.6348,{"v":0.000278,"d":"2.78E-04"},0.0020056,"Protein kinase superfamily protein."]
["AT4G21070","BRCA1",80.077,1.6027,0.35717,4.4872,{"v":7.22e-06,"d":"7.22E-06"},{"v":5.32e-05,"d":"5.32E-05"},"full_name=breast cancer susceptibility1. breast cancer susceptibility1. Encodes AtBRCA1, an ortholog of the human breast cancer susceptibility gene 1. Contains one N-terminal RING finger, two C-terminal BRCT and the p300/CBP interacting domain. Strongly induced by gamma rays, consistent with a putative role in DNA repair and in cell cycle control.","AT3G12860",null,239.91,-0.89524,0.23452,-3.8173,{"v":1.35E-4,"d":"1.35E-04"},{"v":0.00099,"d":"9.90E-04"},"NOP56-like pre RNA processing ribonucleoprotein.","AT3G56310","AGAL3",747.27,0.55826,0.15384,3.6288,{"v":0.000285,"d":"2.85E-04"},2.0482E-3,"Melibiase family protein."]
["AT5G54960","PDC2",1692.6,-0.4881,0.10881,-4.486,{"v":7.26e-06,"d":"7.26E-06"},{"v":5.34e-05,"d":"5.34E-05"},"full_name=pyruvate decarboxylase-2. pyruvate decarboxylase-2. pyruvate decarboxylase-2","AT1G34110","RGI5",285.09,0.72218,0.18925,3.8159,{"v":1.36E-4,"d":"1.36E-04"},{"v":0.000995,"d":"9.95E-04"},"Leucine-rich receptor-like protein kinase family protein.","AT2G07695",null,13.589,4.1053,1.1318,3.6273,{"v":0.000286,"d":"2.86E-04"},2.0574E-3,"Cytochrome C oxidase subunit II-like, transmembrane domain-containing protein."]
["AT2G18220","NOC2",746.06,0.63846,0.1424,4.4836,{"v":7.34E-6,"d":"7.34E-06"},{"v":5.4e-05,"d":"5.40E-05"},"Noc2p family.","AT1G03130","PSAD-2",998.75,0.70084,0.18377,3.8137,{"v":1.37E-4,"d":"1.37E-04"},0.0010029,"full_name=photosystem I subunit D-2. photosystem I subunit D-2. Encodes a protein predicted by sequence similarity with spinach PsaD to be photosystem I reaction center subunit II (PsaD2)","AT3G19440",null,39.076,-1.9478,0.53701,-3.6271,{"v":0.000287,"d":"2.87E-04"},0.0020581,"Pseudouridine synthase family protein."]
["AT1G14700","PAP3",37.032,2.9967,0.66852,4.4825,{"v":7.38e-06,"d":"7.38E-06"},{"v":5.42e-05,"d":"5.42E-05"},"full_name=purple acid phosphatase 3. purple acid phosphatase 3.","AT3G08550","KOB1",350.77,0.66115,0.17347,3.8114,{"v":0.000138,"d":"1.38E-04"},0.0010112,"full_name=KOBITO. elongation defective 1 protein / ELD1 protein. mutant is Dwarfed and shows defects in cell elongation; Cellulose deficient; Plasma Membrane Protein","AT1G52280","RABG3d",101.66,-1.1907,0.32858,-3.6239,{"v":2.9E-4,"d":"2.90E-04"},0.0020809,"full_name=RAB GTPase homolog G3D. RAB GTPase homolog G3D."]
["AT5G55630","KCO1",250.05,-0.94611,0.21133,-4.4768,{"v":7.58e-06,"d":"7.58E-06"},{"v":5.55e-05,"d":"5.55E-05"},"full_name=TWO PORE K CHANNEL. Outward rectifying potassium channel protein. Encodes AtTPK1 (KCO1), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK1 is targeted to the vacuolar membrane. Forms homomeric ion channels in vivo. Voltage-independent and Ca2+-activated K+ channel. Activated by 14-3-3 proteins.","AT1G74490","PBL29",20.348,2.6728,0.70193,3.8077,{"v":0.00014,"d":"1.40E-04"},0.0010242,"Protein kinase superfamily protein.","AT4G04692",null,543.63,0.95002,0.2623,3.6219,{"v":2.92E-4,"d":"2.92E-04"},2.0926E-3,"pseudogene. pseudogene of unknown protein"]
["AT1G51400",null,534.02,-0.71416,0.15968,-4.4726,{"v":7.73e-06,"d":"7.73E-06"},{"v":5.66E-5,"d":"5.66E-05"},"Photosystem II 5 kD protein.","AT3G51280",null,31.276,2.1108,0.55478,3.8048,{"v":0.000142,"d":"1.42E-04"},0.0010347,"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT5G04370","NAMT1",43.341,1.8571,0.51302,3.62,{"v":0.000295,"d":"2.95E-04"},0.0021052,"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. A member of the Arabidopsis SABATH methyltransferase gene family. Encodes NAMT1, a methyltransferase that methylates nicotinic acid."]
["AT2G32440","KAO2",325.37,0.8026,0.17958,4.4693,{"v":7.85e-06,"d":"7.85E-06"},{"v":5.74e-05,"d":"5.74E-05"},"full_name=ent-kaurenoic acid hydroxylase 2. ent-kaurenoic acid hydroxylase 2. ent-kaurenoic acid hydroxylase (KAO2)","AT5G20500",null,695.02,0.54587,0.14358,3.802,{"v":1.44E-4,"d":"1.44E-04"},0.0010453,"Glutaredoxin family protein.","AT2G36900","MEMB11",318.81,0.78283,0.21638,3.6179,{"v":0.000297,"d":"2.97E-04"},2.1197E-3,"full_name=membrin 11. membrin 11. member of Membrin Gene Family"]
["AT5G60850","OBP4",159.64,-1.1142,0.24972,-4.4618,{"v":8.13e-06,"d":"8.13E-06"},{"v":5.94E-5,"d":"5.94E-05"},"full_name=OBF binding protein 4. OBF binding protein 4. Encodes a zinc finger protein.","AT4G14365","XBAT34",26.337,2.4247,0.63804,3.8003,{"v":1.45E-4,"d":"1.45E-04"},0.0010519,"full_name=XB3 ortholog 4 in Arabidopsis thaliana. hypothetical protein.","AT3G26780","MEF14",416.9,-0.68931,0.19061,-3.6164,{"v":2.99E-4,"d":"2.99E-04"},2.1308E-3,"full_name=mitochondrial editing factor 14. Phosphoglycerate mutase family protein. Encodes MEF14 (mitochondrial editing factor 14), a PPR (pentatricopeptide repeat proteins) protein required for RNA editing at site matR-1895 in mitochondria."]
["AT3G57290","EIF3E",2160.9,0.42108,0.094517,4.455,{"v":8.39e-06,"d":"8.39E-06"},{"v":6.11e-05,"d":"6.11E-05"},"full_name=eukaryotic translation initiation factor 3E. eukaryotic translation initiation factor 3E. Encodes a protein that is found in not only the eif3 complex but also in association with subunits of the COP9 signalosome. eIF3e appears to be subjected to proteasome-dependent degradation that requires the PCI domain of eIF3e. The level of eIF3e present in cells appears to affect the rate of translation.","AT2G47540",null,7.8193,6.8421,1.8031,3.7946,{"v":0.000148,"d":"1.48E-04"},1.0735E-3,"Pollen Ole e 1 allergen and extensin family protein.","AT5G01775",null,39.622,-1.9904,0.55134,-3.6101,{"v":0.000306,"d":"3.06E-04"},0.0021782]
["AT5G11060","KNAT4",79.359,1.7636,0.39605,4.4529,{"v":8.47e-06,"d":"8.47E-06"},{"v":6.17e-05,"d":"6.17E-05"},"full_name=KNOTTED1-like homeobox gene 4. homeobox protein knotted-1-like 4. A member of Class II KN1-like homeodomain transcription factors (together with KNAT3 and KNAT5), with greatest homology to the maize knox1 homeobox protein. Expression regulated by light. Detected in all tissues examined, but most prominent in leaves and young siliques. Transient expression of GFP translational fusion protein suggests bipartite localization in nucleus and cytoplasm. KNAT4 promoter activity showed cell-type specific pattern along longitudinal root axis; GUS expression pattern started at the elongation zone, predominantly in the phloem and pericycle cells, extending to endodermis toward the base of the root.","AT4G34890","XDH1",640.39,-0.57102,0.15063,-3.7909,{"v":0.00015,"d":"1.50E-04"},1.0884E-3,"full_name=xanthine dehydrogenase 1. xanthine dehydrogenase 1. Encodes a xanthine dehydrogenase, involved in purine catabolism. Ubiquitously expressed, but the transcript level is altered during aging, senescence, salt and cold stress, ABA treatment, and dark treatment. RNAi lines that suppress both XDH1 and XDH2 produce small plants with reduced fertility and accelerated leaf senescence. Role in drought tolerance.","AT1G62500","DEG27",28.367,-2.339,0.64852,-3.6067,{"v":3.1E-4,"d":"3.10E-04"},2.2044E-3,"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein."]
["AT3G54090","FLN1",833.85,0.58069,0.13042,4.4523,{"v":8.49E-6,"d":"8.49E-06"},{"v":6.18e-05,"d":"6.18E-05"},"full_name=fructokinase-like 1. fructokinase-like 1. Encodes a fructokinase-like protein (AT3G54090/FLN1, AT1G69200/FLN2), a member of the pfkB-carbohydrate kinase family. FLN1 and FLN2 are potential plastidial thioredoxin z (TRX z) targets. Mutants display mutant chloroplast development, general plant growth and development defects and defects in PEP-dependent transcription.","AT3G23490","CYN",958.2,-0.63655,0.168,-3.7891,{"v":0.000151,"d":"1.51E-04"},0.0010958,"full_name=cyanase. cyanase. Encodes a cyanase that catalyzes the bicarbonate-dependent breakdown of cyanate to ammonia and bicarbonate. CYN forms a hexadecamer and is believed to be a cytosolic protein. Long-term exposure to NaCl increases CYN transcript levels. It is also expressed at higher levels in flowers relative to stems, roots, and seedlings.","AT3G53870",null,3390.2,-0.49413,0.13703,-3.6061,{"v":0.000311,"d":"3.11E-04"},0.0022073,"Ribosomal protein S3 family protein."]
["AT1G49600","RBP47A",2374.6,0.45919,0.10322,4.4487,{"v":8.64e-06,"d":"8.64E-06"},{"v":6.28e-05,"d":"6.28E-05"},"full_name=RNA-binding protein 47A. RNA-binding protein 47A.","AT5G41350",null,177.9,-0.92029,0.24298,-3.7875,{"v":0.000152,"d":"1.52E-04"},0.0011013,"RING/U-box superfamily protein.","AT3G24180",null,738.36,0.69243,0.19208,3.6048,{"v":0.000312,"d":"3.12E-04"},2.2158E-3,"Beta-glucosidase, GBA2 type family protein."]
["AT1G73080","PEPR1",785.79,-0.6117,0.13763,-4.4444,{"v":8.81e-06,"d":"8.81E-06"},{"v":6.39e-05,"d":"6.39E-05"},"full_name=PEP1 receptor 1. PEP1 receptor 1. Encodes a leucine-rich repeat receptor kinase. Functions as a receptor for AtPep1 to amplify innate immunity response to pathogen attacks.","AT3G08700","UBC12",10.631,-6.4283,1.6989,-3.7837,{"v":1.55E-4,"d":"1.55E-04"},0.0011162,"full_name=ubiquitin-conjugating enzyme 12. ubiquitin-conjugating enzyme 12.","AT4G14870","SECE1",148.25,-1.044,0.28992,-3.601,{"v":0.000317,"d":"3.17E-04"},0.0022444,"secE/sec61-gamma protein transport protein. Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid."]
["AT5G64580","EMB3144",800.83,0.58676,0.13218,4.4391,{"v":9.03e-06,"d":"9.03E-06"},{"v":6.54e-05,"d":"6.54E-05"},"full_name=EMBRYO DEFECTIVE 3144. AAA-type ATPase family protein.","AT1G74300",null,77.538,-1.3443,0.35561,-3.7803,{"v":0.000157,"d":"1.57E-04"},1.1298E-3,"alpha/beta-Hydrolases superfamily protein.","AT3G23890","TOPII",100.14,-1.1596,0.32222,-3.5989,{"v":0.00032,"d":"3.20E-04"},0.0022595,"full_name=topoisomerase II. topoisomerase II. Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues."]
["AT3G12960","SMP1",306.49,-0.99283,0.22369,-4.4384,{"v":9.06e-06,"d":"9.06E-06"},{"v":6.56e-05,"d":"6.56E-05"},"full_name=seed maturation protein 1. seed maturation protein.","AT2G25270",null,77.694,1.3483,0.35684,3.7783,{"v":0.000158,"d":"1.58E-04"},1.1377E-3,"transmembrane protein.","AT3G48115",null,374.9,0.9745,0.27094,3.5967,{"v":0.000322,"d":"3.22E-04"},0.002276,"other_RNA. Unknown gene"]
["AT3G21200","PGR7",642.4,0.6113,0.13801,4.4294,{"v":9.45e-06,"d":"9.45E-06"},{"v":6.83e-05,"d":"6.83E-05"},"full_name=proton gradient regulation 7. proton gradient regulation 7.","AT2G31800",null,257.89,0.77005,0.2039,3.7766,{"v":0.000159,"d":"1.59E-04"},1.1436E-3,"Integrin-linked protein kinase family.","AT3G62860","MAGL12",311.22,-0.75192,0.20925,-3.5934,{"v":0.000326,"d":"3.26E-04"},0.0023015,"alpha/beta-Hydrolases superfamily protein."]
["AT2G25490","EBF1",1097.3,0.54276,0.12257,4.4281,{"v":9.51e-06,"d":"9.51E-06"},{"v":6.86E-5,"d":"6.86E-05"},"full_name=EIN3-binding F box protein 1. EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3.","AT2G33510","CFL1",73.963,1.5027,0.39798,3.7757,{"v":0.00016,"d":"1.60E-04"},0.0011468,"ATP-dependent RNA helicase.","AT3G24503","ALDH2C4",631.2,0.6518,0.18143,3.5926,{"v":0.000327,"d":"3.27E-04"},0.0023069,"full_name=aldehyde dehydrogenase 2C4. aldehyde dehydrogenase 2C4. Arabidopsis thaliana aldehyde dehydrogenase AtALDH1a mRNA. a sinapaldehyde dehydrogenase catalyzes both the oxidation of coniferylaldehyde and sinapaldehyde forming ferulic acid and sinapic acid, respectively"]
["AT2G43020","PAO2",746.57,-0.58837,0.13298,-4.4245,{"v":9.67e-06,"d":"9.67E-06"},{"v":6.97E-5,"d":"6.97E-05"},"full_name=polyamine oxidase 2. polyamine oxidase 2. Encodes a polyamine oxidase.","AT1G78995",null,28.926,2.1998,0.58303,3.7731,{"v":0.000161,"d":"1.61E-04"},0.0011578,"hypothetical protein.","AT5G63550",null,153.19,-0.99612,0.27765,-3.5877,{"v":0.000334,"d":"3.34E-04"},0.0023475,"DEK domain-containing chromatin associated protein."]
["AT5G56980",null,231.91,-0.97035,0.21967,-4.4173,{"v":9.99e-06,"d":"9.99E-06"},{"v":7.19e-05,"d":"7.19E-05"},"cotton fiber protein.","AT1G44760",null,407.61,0.63888,0.16947,3.7697,{"v":1.63E-4,"d":"1.63E-04"},1.1707E-3,"Adenine nucleotide alpha hydrolases-like superfamily protein.","AT4G35750",null,794.79,-0.66099,0.1845,-3.5827,{"v":0.00034,"d":"3.40E-04"},2.3874E-3,"SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein."]
["AT3G07650","COL9",176.36,-1.3427,0.3042,-4.4139,{"v":1.02e-05,"d":"1.02E-05"},{"v":7.3e-05,"d":"7.30E-05"},"full_name=CONSTANS-like 9. CONSTANS-like 9. This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO.","AT1G79390",null,489.85,-0.62645,0.16629,-3.7672,{"v":1.65E-4,"d":"1.65E-04"},0.0011817,"centrosomal protein.","AT5G56500","Cpn60beta3",284.19,-0.766,0.21395,-3.5803,{"v":0.000343,"d":"3.43E-04"},0.002409,"full_name=chaperonin-60beta3. TCP-1/cpn60 chaperonin family protein. Encodes a subunit of chloroplasts chaperonins that are involved in mediating the folding of newly synthesized, translocated, or stress-denatured proteins. Cpn60 subunits are: Cpn60alpha1 (At2g28000), AtCpn60alpha2 (At5g18820), AtCpn60beta1 (At1g55490), AtCpn60beta2 (At3g13470), AtCpn60beta3 (At5g56500), AtCpn60beta4 (At1g26230)."]
["AT1G62200","PTR6",156.83,-1.1728,0.26602,-4.4087,{"v":1.04E-5,"d":"1.04E-05"},{"v":7.46e-05,"d":"7.46E-05"},"full_name=peptide transporter 6. Major facilitator superfamily protein.","AT3G46820","TOPP5",121.52,1.0276,0.27284,3.7664,{"v":1.66E-4,"d":"1.66E-04"},0.0011836,"full_name=type one serine/threonine protein phosphatase 5. type one serine/threonine protein phosphatase 5. Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers.","AT5G08139",null,128.09,1.1145,0.31137,3.5792,{"v":0.000345,"d":"3.45E-04"},0.0024144,"RING/U-box superfamily protein."]
["AT5G57240","ORP4C",182.06,1.0602,0.24073,4.4043,{"v":1.06E-5,"d":"1.06E-05"},{"v":7.6e-05,"d":"7.60E-05"},"full_name=OSBP(oxysterol binding protein)-related protein 4C. OSBP(oxysterol binding protein)-related protein 4C.","AT3G57220",null,166.77,0.99385,0.26394,3.7655,{"v":1.66E-4,"d":"1.66E-04"},0.0011866,"Glycosyl transferase family 4 protein.","AT4G03560","TPC1",1193.4,0.4984,0.13932,3.5773,{"v":0.000347,"d":"3.47E-04"},0.002429,"full_name=two-pore channel 1. two-pore channel 1. Encodes a depolarization-activated Ca(2+) channel. Anti-sense experiments with this gene as well as Sucrose-H(+) symporters and complementation of yeast sucrose uptake mutant cch1 suggest that this protein mediates a voltage-activated Ca(2+ )influx. Mutants lack detectable SV channel activity suggesting TPC1 is essential component of the SV channel. Patch clamp analysis of loss of function mutation indicates TPC1 does not affect Ca2+ signaling in response to abiotic and biotic stress."]
["AT4G35520","MLH3",37.785,2.4297,0.55198,4.4018,{"v":1.07e-05,"d":"1.07E-05"},{"v":7.68e-05,"d":"7.68E-05"},"full_name=MUTL protein homolog 3. MUTL protein homolog 3. DNA mismatch repair protein similar to MutL. Required for normal levels of meiotic crossovers","AT5G44650","CEST",851,0.49074,0.13057,3.7585,{"v":0.000171,"d":"1.71E-04"},1.2182E-3,"full_name=chloroplast protein-enhancing stress tolerance. death domain associated protein. Encodes a nucleus-encoded thylakoid protein, cooperates with the plastid-encoded Ycf3 protein in photosystem i assembly. Also induces tolerance to multiple environmental stresses and reduces photooxidative damage.","AT1G29910","CAB3",8104.9,1.3472,0.37683,3.575,{"v":3.5E-4,"d":"3.50E-04"},2.4456E-3,"full_name=chlorophyll A/B binding protein 3. chlorophyll A/B binding protein 3. member of Chlorophyll a/b-binding protein family"]
["AT4G31510",null,333.22,-0.99639,0.22647,-4.3996,{"v":1.08E-5,"d":"1.08E-05"},{"v":7.75E-5,"d":"7.75E-05"},"major centromere autoantigen B-like protein.","AT2G20515",null,175.11,0.90473,0.24097,3.7546,{"v":1.74E-4,"d":"1.74E-04"},0.001236,"pollen Ole e I family allergen protein.","AT3G08680",null,299.91,-0.74687,0.20915,-3.571,{"v":0.000356,"d":"3.56E-04"},0.0024812,"Leucine-rich repeat protein kinase family protein."]
["AT4G20850","TPP2",11980,-0.33301,0.075732,-4.3972,{"v":1.1E-5,"d":"1.10E-05"},{"v":7.83e-05,"d":"7.83E-05"},"full_name=tripeptidyl peptidase ii. tripeptidyl peptidase ii. Tripeptidyl Peptidase II. Ser protease that assembles into a large oligomeric complex containing two proteins of 153 and 142 kD that are derived from a single TPP2 gene, with the smaller version missing part of the C-terminal end. Not essential, based on the lack of phenotype of a T-DNA disruption mutant.","AT4G36580","SBA4",174.16,-0.94682,0.25224,-3.7536,{"v":1.74E-4,"d":"1.74E-04"},1.2396E-3,"AAA-type ATPase family protein.","AT5G52300","LTI65",5665.5,3.7851,1.0605,3.5691,{"v":0.000358,"d":"3.58E-04"},2.4968E-3,"full_name=LOW-TEMPERATURE-INDUCED 65. CAP160 protein. encodes a protein that is induced in expression in response to water deprivation such as cold, high-salt, and dessication. The response appears to be via abscisic acid. The promoter region contains two ABA-responsive elements (ABREs) that are required for the dehydration-responsive expression of rd29B as cis-acting elements. Protein is a member of a gene family with other members found plants, animals and fungi."]
["AT2G42620","MAX2",322.45,-0.88488,0.20129,-4.3961,{"v":1.1E-5,"d":"1.10E-05"},{"v":7.86E-5,"d":"7.86E-05"},"full_name=MORE AXILLARY BRANCHES 2. RNI-like superfamily protein. The mutations at MAX2 cause increased hypocotyl and petiole elongation in light-grown seedlings. Positional cloning identifies MAX2 as a member of the F-box leucine-rich repeat family of proteins. MAX2 is identical to ORE9, a proposed regulator of leaf senescence. Involved in positive regulation of light responses.","AT2G45360",null,69.147,-1.9431,0.5179,-3.7519,{"v":1.75E-4,"d":"1.75E-04"},0.0012467,"ankyrin repeat/KH domain protein (DUF1442).","AT1G51540",null,169.91,-0.90934,0.25484,-3.5683,{"v":3.59E-4,"d":"3.59E-04"},0.0025016,"Galactose oxidase/kelch repeat superfamily protein."]
["AT3G16390","NSP3",13.91,-7.2921,1.6607,-4.3909,{"v":1.13E-5,"d":"1.13E-05"},{"v":8.03E-5,"d":"8.03E-05"},"full_name=nitrile specifier protein 3. nitrile specifier protein 3. Encodes a nitrile-specifier protein NSP3. NSP3 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation.","AT1G18640","PSP",211.8,0.82788,0.22104,3.7454,{"v":0.00018,"d":"1.80E-04"},0.0012762,"full_name=3-phosphoserine phosphatase. 3-phosphoserine phosphatase. Encodes a 3-phosphoserine phosphatase acting in the last step of serine biosynthesis within the chloroplast. Essential for embryo, pollen and root development.","AT1G67730","KCR1",633.09,-0.70346,0.19755,-3.5609,{"v":0.00037,"d":"3.70E-04"},0.0025678,"full_name=beta-ketoacyl reductase 1. beta-ketoacyl reductase 1. Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene."]
["AT3G04380","SUVR4",135.82,-1.2411,0.28268,-4.3903,{"v":1.13E-5,"d":"1.13E-05"},{"v":8.05e-05,"d":"8.05E-05"},"SET-domain containing protein lysine methyltransferase family protein. Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.","AT4G26140","BGAL12",36.417,1.898,0.50676,3.7454,{"v":0.00018,"d":"1.80E-04"},0.0012762,"full_name=beta-galactosidase 12. beta-galactosidase 12. putative beta-galactosidase","AT3G55360","CER10",438.27,-0.69616,0.19552,-3.5606,{"v":0.00037,"d":"3.70E-04"},2.5699E-3,"full_name=ECERIFERUM 10. 3-oxo-5-alpha-steroid 4-dehydrogenase family protein. Enoyl-CoA reductase is involved in all very long chain fatty acids (VLCFA) elongation reactions that are required for cuticular wax, storage lipid and sphingolipid metabolism. The protein is located in the ER, but in contrast to its yeast homolog TSC13 is not particularly enriched in the nuclear envelope-vacuole junction. Mutants in this gene show abnormal organ morphology and stem glossiness. Cells in all tissues are only about 1/3 of the size of wild type cells. The morphological changes are most likely to result from the reduction in the VLCFA content of sphingolipids. Mutants also show abnormalities in the endocytic membrane organization and transport."]
["AT2G41220","GLU2",2538.6,-0.4113,0.093796,-4.3851,{"v":1.16e-05,"d":"1.16E-05"},{"v":8.24e-05,"d":"8.24E-05"},"full_name=glutamate synthase 2. glutamate synthase 2. Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression is most abundant in root.","AT4G04770","ABCI8",716.85,-0.52228,0.13952,-3.7435,{"v":0.000182,"d":"1.82E-04"},1.2841E-3,"full_name=ATP-binding cassette I8. ATP binding cassette protein 1. Encodes an iron-stimulated ATPase. A member of the NAP subfamily of ABC transporters. Involved in Fe-S cluster assembly. Similar to SufB. Involved in the regulation of iron homeostasis. Able to form homodimers. Interacts with AtNAP7 inside the chloroplast.","AT1G12240","ATBETAFRUCT4",105.03,-1.1409,0.32061,-3.5585,{"v":0.000373,"d":"3.73E-04"},0.0025862,"Glycosyl hydrolases family 32 protein. Encodes a vacuolar invertase betaFruct4. betaFruct4 is transported from the endoplasmic reticulum through the intermediate compartments as a membrane protein. The N-terminal cytoplasmic domain contains multiple sequence motifs that are involved at various stages in the trafficking of betaFruct4 from the ER to the central vacuole."]
["AT2G48140","EDA4",63.248,-1.864,0.42532,-4.3825,{"v":1.17E-5,"d":"1.17E-05"},{"v":8.32e-05,"d":"8.32E-05"},"full_name=embryo sac development arrest 4. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT1G13340","ISTL6",54.408,-1.827,0.4885,-3.74,{"v":1.84E-4,"d":"1.84E-04"},0.0013,"Regulator of Vps4 activity in the MVB pathway protein.","AT5G04000",null,108.17,1.4431,0.40571,3.557,{"v":0.000375,"d":"3.75E-04"},0.0025976,"hypothetical protein."]
["AT3G09270","GSTU8",46.535,2.3266,0.53153,4.3772,{"v":1.2E-5,"d":"1.20E-05"},{"v":8.51e-05,"d":"8.51E-05"},"full_name=glutathione S-transferase TAU 8. glutathione S-transferase TAU 8. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","AT4G27520","ENODL2",445.44,-0.88927,0.23796,-3.737,{"v":0.000186,"d":"1.86E-04"},0.0013129,"full_name=early nodulin-like protein 2. early nodulin-like protein 2.","AT4G19960","KUP9",290.01,0.75917,0.2137,3.5525,{"v":0.000382,"d":"3.82E-04"},2.637E-3,"full_name=K+ uptake permease 9. K+ uptake permease 9. Encodes a potassium ion transmembrane transporter. Also mediates cesium uptake when expressed in E. coli."]
["AT5G60730","GET3C",70.362,1.7623,0.40298,4.3731,{"v":1.22E-5,"d":"1.22E-05"},{"v":8.66e-05,"d":"8.66E-05"},"Anion-transporting ATPase.","AT1G77450","NAC032",233.8,-1.2166,0.32561,-3.7363,{"v":0.000187,"d":"1.87E-04"},1.3154E-3,"full_name=NAC domain containing protein 32. NAC domain containing protein 32.","AT3G19990",null,276.91,0.7524,0.21196,3.5497,{"v":3.86E-4,"d":"3.86E-04"},0.0026618,"E3 ubiquitin-protein ligase."]
["AT2G39705","RTFL8",266.86,0.95517,0.21853,4.3709,{"v":1.24E-5,"d":"1.24E-05"},{"v":8.74e-05,"d":"8.74E-05"},"full_name=ROTUNDIFOLIA like 8. ROTUNDIFOLIA like 8.","AT5G53750",null,84.055,-1.2774,0.34199,-3.7352,{"v":0.000188,"d":"1.88E-04"},1.3197E-3,"CBS domain-containing protein.","AT5G13060","ABAP1",39.554,-1.8062,0.50896,-3.5489,{"v":0.000387,"d":"3.87E-04"},0.0026678,"full_name=ARMADILLO BTB protein 1. ARMADILLO BTB protein 1. Encodes a novel Armadillo BTB protein that intreacts with the pre-replication complex and several transcription factors. Overexpression results in decreased cell proliferation and loss of function results in increased cell proliferation suggesting a role in negative regulation of cellular proliferation."]
["AT5G49665",null,496.45,0.73705,0.16866,4.3701,{"v":1.24E-5,"d":"1.24E-05"},{"v":8.76e-05,"d":"8.76E-05"},"Zinc finger (C3HC4-type RING finger) family protein.","AT2G48140","EDA4",10.371,-6.3936,1.7122,-3.7342,{"v":0.000188,"d":"1.88E-04"},0.0013236,"full_name=embryo sac development arrest 4. Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT1G19540",null,119.15,1.0613,0.2992,3.5471,{"v":0.00039,"d":"3.90E-04"},0.0026829,"NmrA-like negative transcriptional regulator family protein."]
["AT1G50430","DWF5",650.23,-0.65986,0.15106,-4.3683,{"v":1.25e-05,"d":"1.25E-05"},{"v":8.83e-05,"d":"8.83E-05"},"full_name=DWARF 5. Ergosterol biosynthesis ERG4/ERG24 family. Mutants are defective in Brassinosteroid biosynthesis (delta7-sterol-C7 reduction step) and have a dwarf phenotype.","AT1G08230",null,175.4,-1.3804,0.36974,-3.7335,{"v":0.000189,"d":"1.89E-04"},1.3262E-3,"Transmembrane amino acid transporter family protein. Codes for a H+-driven, high affinity gamma-aminobutyric acid (GABA) transporter. Localized at the plasma membrane. In planta, AtGAT1 expression was highest in flowers and under conditions of elevated GABA concentrations such as wounding or senescence.","AT1G64720","CP5",5987.9,0.49213,0.13877,3.5464,{"v":0.000391,"d":"3.91E-04"},0.0026875,"Polyketide cyclase/dehydrase and lipid transport superfamily protein. membrane related protein CP5"]
["AT1G01305",null,27.327,-2.9555,0.67681,-4.3668,{"v":1.26E-5,"d":"1.26E-05"},{"v":8.88e-05,"d":"8.88E-05"},"hypothetical protein.","AT5G24130",null,10.225,-6.3683,1.7066,-3.7315,{"v":0.00019,"d":"1.90E-04"},1.335E-3,"polypyrimidine tract-binding-like protein.","AT5G54180","PTAC15",41.809,-1.8546,0.52302,-3.5459,{"v":0.000391,"d":"3.91E-04"},2.6898E-3,"full_name=plastid transcriptionally active 15. plastid transcriptionally active 15."]
["AT1G15110","PSS1",432.79,-0.82643,0.1895,-4.3611,{"v":1.29E-5,"d":"1.29E-05"},{"v":9.1e-05,"d":"9.10E-05"},"full_name=phosphatidylserine synthase 1. phosphatidyl serine synthase family protein. PSS1 encodes a base-exchange-type Phosphatidylserine (PS) synthase. Mutant analysis revealed its role in pollen maturation.","AT2G33790","AGP30",7.4419,6.7718,1.8159,3.7291,{"v":1.92E-4,"d":"1.92E-04"},1.3452E-3,"full_name=arabinogalactan protein 30. arabinogalactan protein 30. pollen Ole e 1 allergen protein containing 14.6% proline residues, similar to arabinogalactan protein (Daucus carota) GI:11322245, SP:Q03211 Pistil-specific extensin-like protein precursor (PELP) {Nicotiana tabacum}; contains Pfam profile PF01190: Pollen proteins Ole e I family","AT4G27130",null,2118.1,0.52716,0.14877,3.5434,{"v":0.000395,"d":"3.95E-04"},0.0027108,"Translation initiation factor SUI1 family protein."]
["AT1G21560",null,379.4,-0.72881,0.1673,-4.3563,{"v":1.32e-05,"d":"1.32E-05"},{"v":9.29e-05,"d":"9.29E-05"},"hypothetical protein.","AT4G02450","P23-1",2162,-0.42075,0.11291,-3.7264,{"v":1.94E-4,"d":"1.94E-04"},1.358E-3,"HSP20-like chaperones superfamily protein.","AT5G62620","GALT6",172.75,0.91121,0.25724,3.5422,{"v":3.97E-4,"d":"3.97E-04"},2.7177E-3,"Galactosyltransferase family protein."]
["AT5G19750",null,288.78,0.97043,0.22296,4.3524,{"v":1.35e-05,"d":"1.35E-05"},{"v":9.44e-05,"d":"9.44E-05"},"Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein.","AT4G15140",null,7.3638,6.7587,1.8155,3.7228,{"v":0.000197,"d":"1.97E-04"},1.3755E-3,"hypothetical protein.","AT5G45010","DSS1(V)",231.32,-0.83206,0.23499,-3.5409,{"v":0.000399,"d":"3.99E-04"},2.7285E-3,"full_name=DSS1 homolog on chromosome V. DSS1 homolog on chromosome V."]
["AT1G28030",null,13.644,-7.2643,1.6691,-4.3521,{"v":1.35e-05,"d":"1.35E-05"},{"v":9.45e-05,"d":"9.45E-05"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT2G32440","KAO2",419.41,0.71809,0.19292,3.7223,{"v":0.000197,"d":"1.97E-04"},0.0013776,"full_name=ent-kaurenoic acid hydroxylase 2. ent-kaurenoic acid hydroxylase 2. ent-kaurenoic acid hydroxylase (KAO2)","AT5G51220",null,152.27,-0.98626,0.27863,-3.5397,{"v":0.000401,"d":"4.01E-04"},0.00274,"ubiquinol-cytochrome C chaperone family protein."]
["AT4G22580",null,159.87,-1.1352,0.26103,-4.3489,{"v":1.37e-05,"d":"1.37E-05"},{"v":9.56e-05,"d":"9.56E-05"},"Exostosin family protein.","AT4G18370","DEG5",190.36,0.95876,0.25783,3.7186,{"v":0.0002,"d":"2.00E-04"},0.0013949,"full_name=degradation of periplasmic proteins 5. DEGP protease 5. Encodes DEG5. Forms a hexamer with DEG8 in the thylakoid lumen. Involved in the cleavage of photodamaged D2 protein of photosystem II (PSII).","AT1G54710","ATG18H",275.25,0.77972,0.22041,3.5376,{"v":0.000404,"d":"4.04E-04"},2.7553E-3,"full_name=homolog of yeast autophagy 18 (ATG18) H. autophagy 18h-like protein."]
["AT1G16850",null,4470,-0.3944,0.090723,-4.3473,{"v":1.38E-5,"d":"1.38E-05"},{"v":9.62e-05,"d":"9.62E-05"},"transmembrane protein.","AT1G71410","SCYL2B",555.86,0.61569,0.16583,3.7127,{"v":2.05E-4,"d":"2.05E-04"},1.426E-3,"ARM repeat superfamily protein.","AT2G26220",null,24.197,-2.4318,0.68787,-3.5353,{"v":0.000407,"d":"4.07E-04"},2.7764E-3,"pseudogene."]
["AT2G39700","EXPA4",70.318,1.7329,0.39886,4.3448,{"v":1.39e-05,"d":"1.39E-05"},{"v":9.73e-05,"d":"9.73E-05"},"full_name=expansin A4. expansin A4. putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","AT2G18890",null,7.9491,6.8784,1.8533,3.7115,{"v":0.000206,"d":"2.06E-04"},0.001432,"Protein kinase superfamily protein.","AT4G34050","CCoAOMT1",415.76,-0.645,0.18249,-3.5344,{"v":0.000409,"d":"4.09E-04"},0.0027842,"full_name=caffeoyl coenzyme A O-methyltransferase 1. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein."]
["AT3G12360","ITN1",571.47,-0.66044,0.15204,-4.3438,{"v":1.4E-5,"d":"1.40E-05"},{"v":9.76e-05,"d":"9.76E-05"},"full_name=INCREASED TOLERANCE TO NACL. Ankyrin repeat family protein. Encodes a protein with an ankyrin motif and transmembrane domains that is involved in salt tolerance. Expressed throughout the plant and localized to the plasma membrane. Loss of function mutations show an increased tolerance to salt based on assaying seedling growth in the presence of salt. In the mutants, induction of genes required for production of reactive oxygen species is reduced suggesting that itn1 promotes ROS production. It interacts with RCN1 in vivo and may regulate its subcellular localization.","AT1G08910","PIAL1",850.26,-0.54587,0.14728,-3.7063,{"v":0.00021,"d":"2.10E-04"},1.4601E-3,"zinc ion binding protein. Encodes an SP-RING domain containing protein that functions in sumolaytion and is involved in positive regulation of sulfur metabolism and stress response.","AT5G27120",null,1018.2,-0.71467,0.20228,-3.5331,{"v":0.000411,"d":"4.11E-04"},0.0027944,"NOP56-like pre RNA processing ribonucleoprotein. SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; has similarity to MAR binding NOP58 protein"]
["AT4G34380",null,15.669,7.3741,1.6994,4.3394,{"v":1.43E-5,"d":"1.43E-05"},{"v":9.94e-05,"d":"9.94E-05"},"Transducin/WD40 repeat-like superfamily protein.","AT4G20480",null,595.59,-0.64237,0.17344,-3.7036,{"v":2.13E-4,"d":"2.13E-04"},0.0014729,"Putative endonuclease or glycosyl hydrolase.","AT4G16830","ATRGGA",1278.1,0.50125,0.14202,3.5293,{"v":4.17E-4,"d":"4.17E-04"},2.8292E-3,"Hyaluronan / mRNA binding family."]
["AT1G04990",null,400.19,-0.89432,0.20634,-4.3342,{"v":1.46e-05,"d":"1.46E-05"},{"v":1.02E-4,"d":"1.02E-04"},"Zinc finger C-x8-C-x5-C-x3-H type family protein.","AT4G04700","CPK27",28.464,2.1224,0.57361,3.7,{"v":0.000216,"d":"2.16E-04"},1.4916E-3,"full_name=calcium-dependent protein kinase 27. calcium-dependent protein kinase 27. member of Calcium Dependent Protein Kinase","AT3G56370","IRK",150.24,-1.0187,0.28889,-3.5261,{"v":0.000422,"d":"4.22E-04"},0.0028591,"Leucine-rich repeat protein kinase family protein."]
["AT1G77590","LACS9",251.37,-0.93579,0.21605,-4.3314,{"v":1.48e-05,"d":"1.48E-05"},{"v":1.03E-4,"d":"1.03E-04"},"full_name=long chain acyl-CoA synthetase 9. long chain acyl-CoA synthetase 9. Encodes major plastidic long chain acyl-CoA synthetase with a slight substrate preference of oleic acid over any of the other fatty acids.","AT5G16980",null,335.12,-0.78887,0.21344,-3.696,{"v":0.000219,"d":"2.19E-04"},0.0015135,"Zinc-binding dehydrogenase family protein.","AT5G66780",null,2879.8,2.2024,0.6249,3.5243,{"v":0.000425,"d":"4.25E-04"},0.0028738,"late embryogenesis abundant protein."]
["AT5G58140","PHOT2",531.37,0.79541,0.18365,4.3312,{"v":1.48e-05,"d":"1.48E-05"},{"v":1.03E-4,"d":"1.03E-04"},"full_name=phototropin 2. phototropin 2. Membrane-bound protein serine/threonine kinase that functions as blue light photoreceptor in redundancy with PHO1. Involved in stomatal opening, chloroplast movement and phototropism. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT2 possesses two LOV (LOV1 and LOV2, for light-oxygen-voltage-sensing) domains involved in FMN-binding and a C-terminus forming a serine/threonine kinase domain. LOV2 acts as an inhibitor of phototropin kinase in the dark, and light cancels the inhibition through cysteine-FMN adduct formation. LOV1 in contrast acts as an attenuator of photoactivation. Localized to the Golgi apparatus under the induction of blue light.","AT4G27270",null,65.856,1.4275,0.38639,3.6944,{"v":0.00022,"d":"2.20E-04"},1.5222E-3,"Quinone reductase family protein.","AT2G23980","CNGC6",366.69,0.68831,0.1953,3.5243,{"v":0.000425,"d":"4.25E-04"},0.0028738,"full_name=cyclic nucleotide-gated channel 6. cyclic nucleotide-gated channel 6. Encodes a cyclic GMP-activated non-selective cation channel in the plasma membrane of guard cells."]
["AT1G68810","ABS5",115.7,-1.3665,0.31597,-4.3246,{"v":1.53e-05,"d":"1.53E-05"},{"v":1.06E-4,"d":"1.06E-04"},"basic helix-loop-helix (bHLH) DNA-binding superfamily protein.","AT1G67830","FXG1",157.77,0.92538,0.2506,3.6927,{"v":2.22E-4,"d":"2.22E-04"},1.529E-3,"full_name=alpha-fucosidase 1. alpha-fucosidase 1. Encodes a protein with &#945;-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFXG1 was able to remove the t-fucosyl residues of XXFG xyloglucan oligosaccharides.","AT1G55110","IDD7",356.15,0.69164,0.19641,3.5215,{"v":0.000429,"d":"4.29E-04"},0.0028984,"full_name=indeterminate(ID)-domain 7. indeterminate(ID)-domain 7."]
["AT4G02725",null,396.35,0.70817,0.16376,4.3243,{"v":1.53e-05,"d":"1.53E-05"},{"v":1.06E-4,"d":"1.06E-04"},"spindle pole body-associated protein.","AT3G17210","HS1",604.37,0.53533,0.14506,3.6905,{"v":2.24E-4,"d":"2.24E-04"},1.5417E-3,"full_name=heat stable protein 1. heat stable protein 1. Encodes a heat stable protein with antimicrobial and antifungal activity.","AT4G08520",null,401.02,-0.65166,0.18506,-3.5213,{"v":0.000429,"d":"4.29E-04"},2.8988E-3,"SNARE-like superfamily protein."]
["AT5G51670",null,74.608,-1.5918,0.36842,-4.3205,{"v":1.56E-5,"d":"1.56E-05"},{"v":1.07E-4,"d":"1.07E-04"},"hypothetical protein (DUF668).","AT1G60787",null,7.6762,6.8112,1.8489,3.684,{"v":0.00023,"d":"2.30E-04"},0.0015783,"cysteine/histidine-rich C1 domain protein.","AT3G50340",null,76.341,-1.2809,0.36423,-3.5167,{"v":4.37E-4,"d":"4.37E-04"},0.0029439,"hypothetical protein."]
["AT4G21670","CPL1",521.32,0.63205,0.14638,4.3178,{"v":1.58e-05,"d":"1.58E-05"},{"v":0.000109,"d":"1.09E-04"},"full_name=C-terminal domain phosphatase-like 1. C-terminal domain phosphatase-like 1. encodes a a novel transcriptional repressor harboring two double-stranded RNA-binding domains and a region homologous to the catalytic domain of RNA polymerase II C-terminal domain phosphatases found in yeast and in animals that regulate gene transcription. Protein exhibits innate phosphatase activity in vitro. Mutants exhibit hyperresponsiveness to ABA, cold, and NaCl.","AT5G63470","NF-YC4",157.02,0.99996,0.27161,3.6816,{"v":2.32E-4,"d":"2.32E-04"},0.0015921,"full_name=nuclear factor Y, subunit C4. nuclear factor Y, subunit C4.","ATMG01320","nad2",12.973,4.0481,1.1518,3.5147,{"v":0.00044,"d":"4.40E-04"},0.0029626]
["AT1G47550","SEC3A",1109.7,-0.48221,0.11172,-4.3161,{"v":1.59E-5,"d":"1.59E-05"},{"v":0.000109,"d":"1.09E-04"},"full_name=exocyst complex component sec3A. exocyst complex component sec3A. Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.","AT2G02990","RNS1",252.85,-3.7853,1.0284,-3.6809,{"v":2.32E-4,"d":"2.32E-04"},0.0015947,"full_name=ribonuclease 1. ribonuclease 1. Encodes a member of the ribonuclease T2 family that responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in roots.","AT1G60550","ECHID",629.62,0.59788,0.17017,3.5135,{"v":0.000442,"d":"4.42E-04"},2.9743E-3,"full_name=enoyl-CoA hydratase/isomerase D. enoyl-CoA hydratase/isomerase D."]
["AT5G64050","ERS",1010.5,0.52327,0.12133,4.3127,{"v":1.61e-05,"d":"1.61E-05"},{"v":1.11E-4,"d":"1.11E-04"},"full_name=glutamate tRNA synthetase. glutamate tRNA synthetase. Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.","AT4G27670","HSP21",9.8041,-6.3083,1.7145,-3.6793,{"v":2.34E-4,"d":"2.34E-04"},1.6022E-3,"full_name=heat shock protein 21. heat shock protein 21. Encodes Hsp21, a chloroplast located small heat shock protein. A structure model of Hsp21, obtained by homology modeling, single-particle electron microscopy, and lysine-specific chemical crosslinking, shows that the Hsp21 subunits are arranged in two hexameric discs, rotated by 25 degree in relation to each other.","AT4G28100",null,156.18,-0.93443,0.26636,-3.5082,{"v":0.000451,"d":"4.51E-04"},0.0030295,"transmembrane protein."]
["AT3G02820",null,84.302,1.5068,0.34966,4.3093,{"v":1.64e-05,"d":"1.64E-05"},{"v":1.12E-4,"d":"1.12E-04"},"zinc knuckle (CCHC-type) family protein.","AT1G18850","PCP2",282.3,-0.73409,0.1997,-3.676,{"v":0.000237,"d":"2.37E-04"},0.00162,"hypothetical protein.","AT4G24972","TPD1",45.022,1.8439,0.52597,3.5056,{"v":0.000456,"d":"4.56E-04"},0.003053,"full_name=TAPETUM DETERMINANT 1. tapetum determinant 1. Encodes a novel small protein which is similar to proteins of unknown function from other plant species. TPD1 is involved in cell specification during anther and pollen development. Identified in a screen for male steriles. Mutants lack tapetal cells and have an increased number of microsporocytes. Expressed in flower buds, leaves and young seedlings. In anthers, TPD1 is expressed throughout pollen development in parietal cells and sporocytes. Physically interacts with the LRR kinase EMS1 and that interaction results in phosphorylation of TPD1."]
["AT2G43580",null,88.942,-1.5011,0.34864,-4.3056,{"v":1.67e-05,"d":"1.67E-05"},{"v":0.000114,"d":"1.14E-04"},"Chitinase family protein.","AT5G43470","RPP8",186.7,0.84943,0.23123,3.6735,{"v":0.000239,"d":"2.39E-04"},0.0016346,"full_name=RECOGNITION OF PERONOSPORA PARASITICA 8. Disease resistance protein (CC-NBS-LRR class) family. Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus.","AT5G14040","PHT3;1",2749.6,-0.42835,0.12231,-3.5022,{"v":0.000461,"d":"4.61E-04"},0.0030888,"full_name=phosphate transporter 3;1. phosphate transporter 3;1. Encodes a mitochondrial phosphate transporter. Modulates plant responses to salt stress."]
["AT3G19990",null,778.58,-0.56006,0.13014,-4.3037,{"v":1.68e-05,"d":"1.68E-05"},{"v":1.15E-4,"d":"1.15E-04"},"E3 ubiquitin-protein ligase.","AT4G13495",null,1687,0.4405,0.11994,3.6727,{"v":0.00024,"d":"2.40E-04"},0.0016384,"other_RNA. Unknown gene","AT1G15050","IAA34",26.798,2.2857,0.65294,3.5006,{"v":4.64E-4,"d":"4.64E-04"},0.0031052,"full_name=indole-3-acetic acid inducible 34. indole-3-acetic acid inducible 34. Belongs to auxin inducible gene family."]
["AT1G32160",null,440.85,0.7095,0.16514,4.2964,{"v":1.74e-05,"d":"1.74E-05"},{"v":0.000119,"d":"1.19E-04"},"beta-casein (DUF760).","AT3G13110","SERAT2;2",291.91,-0.73325,0.19985,-3.6689,{"v":0.000244,"d":"2.44E-04"},0.001661,"full_name=serine acetyltransferase 2;2. serine acetyltransferase 2;2. Encodes a mitochondrial serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.","AT5G46740","UBP21",84.342,-1.2232,0.34952,-3.4997,{"v":4.66E-4,"d":"4.66E-04"},0.0031126,"full_name=ubiquitin-specific protease 21. ubiquitin-specific protease 21. Encodes a ubiquitin-specific protease."]
["AT1G66470","RHD6",76.151,1.5304,0.35653,4.2924,{"v":1.77E-5,"d":"1.77E-05"},{"v":1.21E-4,"d":"1.21E-04"},"full_name=ROOT HAIR DEFECTIVE6. ROOT HAIR DEFECTIVE6.","AT1G11860",null,2520.3,0.37449,0.1022,3.6642,{"v":0.000248,"d":"2.48E-04"},1.688E-3,"Glycine cleavage T-protein family.","AT1G78420","LARGE IN CHINESE",385.05,0.65323,0.18673,3.4982,{"v":0.000468,"d":"4.68E-04"},0.0031239,"RING/U-box superfamily protein."]
["AT5G13060","ABAP1",56.173,1.8994,0.44252,4.2921,{"v":1.77E-5,"d":"1.77E-05"},{"v":1.21E-4,"d":"1.21E-04"},"full_name=ARMADILLO BTB protein 1. ARMADILLO BTB protein 1. Encodes a novel Armadillo BTB protein that intreacts with the pre-replication complex and several transcription factors. Overexpression results in decreased cell proliferation and loss of function results in increased cell proliferation suggesting a role in negative regulation of cellular proliferation.","AT5G50170",null,396.84,-1.0068,0.27479,-3.6639,{"v":0.000248,"d":"2.48E-04"},1.6891E-3,"C2 calcium/lipid-binding and GRAM domain containing protein.","AT1G07705","NOT2A",157.71,-0.94209,0.26937,-3.4973,{"v":0.00047,"d":"4.70E-04"},0.0031314,"NOT2 / NOT3 / NOT5 family."]
["AT3G29320","PHS1",3136.6,-0.41819,0.097486,-4.2898,{"v":1.79e-05,"d":"1.79E-05"},{"v":1.22E-4,"d":"1.22E-04"},"full_name=alpha-glucan phosphorylase 1. Glycosyl transferase, family 35. Encodes a plastidic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for maltooligosaccharides, such as maltoheptaose.","AT2G20940",null,194.53,-0.84014,0.2294,-3.6624,{"v":0.00025,"d":"2.50E-04"},1.6971E-3,"transmembrane protein, putative (DUF1279).","AT1G47200","WPP2",253.34,-0.76684,0.21934,-3.4961,{"v":0.000472,"d":"4.72E-04"},3.1427E-3,"full_name=WPP domain protein 2. WPP domain protein 2. WPP family members contains an NE targeting domain. This domain, called the WPP domain after a highly conserved Trp-Pro-Pro motif, is necessary for NE targeting of WPP1. RNAi suppression of WPP2 resulted in reduced mitotic activity."]
["AT3G53560",null,1549.4,-0.53157,0.12401,-4.2865,{"v":1.82e-05,"d":"1.82E-05"},{"v":0.000124,"d":"1.24E-04"},"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT1G35320",null,235.89,0.86594,0.23649,3.6617,{"v":0.000251,"d":"2.51E-04"},1.6991E-3,"transmembrane protein.","AT1G19770","PUP14",194.95,0.96148,0.27522,3.4934,{"v":0.000477,"d":"4.77E-04"},0.0031696,"full_name=purine permease 14. purine permease 14. Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane."]
["AT1G22170",null,149.39,-1.3357,0.31222,-4.278,{"v":1.89e-05,"d":"1.89E-05"},{"v":0.000128,"d":"1.28E-04"},"Phosphoglycerate mutase family protein.","AT1G30450","CCC1",452.98,0.63522,0.17375,3.656,{"v":0.000256,"d":"2.56E-04"},0.0017341,"full_name=cation-chloride co-transporter 1. cation-chloride co-transporter 1. member of Cation-chloride co-transporter family","AT1G72610","GER1",320.79,-0.81225,0.23259,-3.4922,{"v":0.000479,"d":"4.79E-04"},0.0031784,"full_name=germin-like protein 1. germin-like protein 1. germin-like protein (GLP1)"]
["AT1G24310","NUP54",338.5,0.75661,0.17704,4.2737,{"v":1.92e-05,"d":"1.92E-05"},{"v":0.000131,"d":"1.31E-04"},"nuclear pore complex protein.","AT5G59910","HTB4",2336.3,-0.37432,0.10244,-3.6539,{"v":0.000258,"d":"2.58E-04"},1.7461E-3,"Histone superfamily protein.","AT4G32330","WDL5",502.91,-0.60599,0.17358,-3.4911,{"v":0.000481,"d":"4.81E-04"},0.0031883,"TPX2 (targeting protein for Xklp2) protein family."]
["AT1G68890","PHYLLO",302.05,0.87829,0.2056,4.2718,{"v":1.94e-05,"d":"1.94E-05"},{"v":0.000132,"d":"1.32E-04"},"full_name=PHYLLO. 2-oxoglutarate decarboxylase/hydro-lyase/magnesium ion-binding protein. Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis.","AT2G28650","EXO70H8",17.587,-5.673,1.5526,-3.6539,{"v":0.000258,"d":"2.58E-04"},1.7461E-3,"full_name=exocyst subunit exo70 family protein H8. exocyst subunit exo70 family protein H8. A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.","AT1G50030","TOR",707.49,0.5515,0.15801,3.4904,{"v":0.000482,"d":"4.82E-04"},0.0031959,"full_name=target of rapamycin. target of rapamycin. Related to TOR proteins from yeast and mammals, regulators of cell growth in response to nutrient availability. TOR proteins belong to the family of phosphatidylinositol 3-kinase and are targets of the antiproliferative drug rapamycin. AtTOR binds the yeast FKBP12 protein in the presence of Rapamycin, is involved in embryogenesis and is expressed in embryos, endosperm and meristems."]
["AT3G53500","RS2Z32",1410.5,0.48139,0.11282,4.2668,{"v":1.98E-5,"d":"1.98E-05"},{"v":1.34E-4,"d":"1.34E-04"},"full_name=arginine/serine-rich zinc knuckle-containing protein 32. RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain-containing protein. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926.","AT4G19230","CYP707A1",333.39,1.08,0.29576,3.6516,{"v":2.61E-4,"d":"2.61E-04"},0.0017589,"full_name=cytochrome P450, family 707, subfamily A, polypeptide 1. cytochrome P450, family 707, subfamily A, polypeptide 1. Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.","AT1G59124",null,409.67,0.6514,0.18683,3.4866,{"v":0.000489,"d":"4.89E-04"},0.0032355,"Disease resistance protein (CC-NBS-LRR class) family."]
["AT3G14210","ESM1",191.26,-3.1831,0.74629,-4.2652,{"v":2e-05,"d":"2.00E-05"},{"v":1.35E-4,"d":"1.35E-04"},"full_name=epithiospecifier modifier 1. GDSL-like lipase/acylhydrolase superfamily protein. A semidominant QTL which has an epistatic effect on the Epithiospecifier gene. Represses nitrile formation and favors isothiocyanate production during glucosinolate hydrolysis. The functional allele deters the insect herbivory T. ni.","AT4G19185","UMAMIT2",108.3,1.0767,0.29494,3.6506,{"v":0.000262,"d":"2.62E-04"},1.7641E-3,"full_name=Usually multiple acids move in and out Transporters 2. nodulin MtN21 /EamA-like transporter family protein. nodulin MtN21-like transporter family protein","AT5G16630","RAD4",215.31,0.87864,0.25203,3.4862,{"v":0.00049,"d":"4.90E-04"},0.0032371,"DNA repair protein Rad4 family."]
["AT1G05260","RCI3",99.818,-1.4837,0.34825,-4.2606,{"v":2.04e-05,"d":"2.04E-05"},{"v":0.000138,"d":"1.38E-04"},"full_name=RARE COLD INDUCIBLE GENE 3. Peroxidase superfamily protein. Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.","AT3G18060",null,437.52,0.59064,0.16192,3.6478,{"v":0.000264,"d":"2.64E-04"},1.7817E-3,"transducin family protein / WD-40 repeat family protein.","AT2G24980","EXT6",42.742,2.0858,0.59863,3.4843,{"v":0.000493,"d":"4.93E-04"},0.0032579,"full_name=extensin 6. Proline-rich extensin-like family protein."]
["AT1G79750","NADP-ME4",5018.5,-0.33563,0.078912,-4.2532,{"v":2.11e-05,"d":"2.11E-05"},{"v":0.000142,"d":"1.42E-04"},"full_name=NADP-malic enzyme 4. NADP-malic enzyme 4. The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed.","AT5G47020",null,788.31,-0.55187,0.1516,-3.6404,{"v":2.72E-4,"d":"2.72E-04"},0.0018305,"MraZ.","AT5G49665",null,318.89,-0.70873,0.20348,-3.483,{"v":0.000496,"d":"4.96E-04"},0.0032673,"Zinc finger (C3HC4-type RING finger) family protein."]
["AT3G07970","QRT2",32.984,-2.583,0.60766,-4.2506,{"v":2.13e-05,"d":"2.13E-05"},{"v":1.44E-4,"d":"1.44E-04"},"full_name=QUARTET 2. Pectin lyase-like superfamily protein. Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.","AT3G44100",null,506.17,-0.56023,0.15394,-3.6392,{"v":0.000273,"d":"2.73E-04"},1.8361E-3,"MD-2-related lipid recognition domain-containing protein.","AT5G44090",null,547.72,0.64529,0.18538,3.4809,{"v":0.0005,"d":"5.00E-04"},3.2881E-3,"Calcium-binding EF-hand family protein."]
["AT3G03950","ECT1",568.86,0.60001,0.14125,4.2478,{"v":2.16E-5,"d":"2.16E-05"},{"v":1.45E-4,"d":"1.45E-04"},"full_name=evolutionarily conserved C-terminal region 1. evolutionarily conserved C-terminal region 1. Physically interacts with CIPK1. Located in the nucleus.","AT3G23300",null,602.13,0.52832,0.1454,3.6335,{"v":0.00028,"d":"2.80E-04"},0.0018749,"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT4G14130","XTH15",7.4805,-6.3735,1.8318,-3.4793,{"v":0.000503,"d":"5.03E-04"},0.0033036,"full_name=xyloglucan endotransglucosylase/hydrolase 15. xyloglucan endotransglucosylase/hydrolase 15. xyloglucan endotransglycosylase-related protein (XTR7)"]
["AT4G22790","RHC1",54.73,-2.0044,0.47191,-4.2474,{"v":2.16E-5,"d":"2.16E-05"},{"v":1.46E-4,"d":"1.46E-04"},"MATE efflux family protein. Encodes a plasma membrane localized MATE type transporter that is involved in CO2 signaling during stomatal aperture regulation. RHC1 regulates HT1 which phosphorylates OST1, a kinase that regulates the SLAC1 anion channel and thus stomatal closing.","AT3G10010","DML2",187.58,-0.8719,0.24,-3.633,{"v":0.00028,"d":"2.80E-04"},0.0018779,"full_name=demeter-like 2. demeter-like 2. Encodes a protein with DNA glycosylase activity that is involved in maintaining methylation marks.","AT1G64660","MGL",1018.5,0.58292,0.16755,3.479,{"v":0.000503,"d":"5.03E-04"},0.0033056,"full_name=methionine gamma-lyase. methionine gamma-lyase. Encodes a functional methionine gamma-lyase, a cytosolic enzyme catalyzes the degradation of methionine into methanethiol, alpha-ketobutyrate and ammonia. The catabolism of excess methionine is important to methionine homeostasis."]
["AT4G38970","FBA2",2740.3,-0.46513,0.10958,-4.2449,{"v":2.19E-5,"d":"2.19E-05"},{"v":1.47E-4,"d":"1.47E-04"},"full_name=fructose-bisphosphate aldolase 2. fructose-bisphosphate aldolase 2. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","AT2G38340","DREB19",29.93,-2.6289,0.72418,-3.6301,{"v":0.000283,"d":"2.83E-04"},0.001896,"full_name=dehydration response element-binding protein 19. Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.","AT4G20070","AAH",143.77,0.98637,0.28358,3.4783,{"v":0.000505,"d":"5.05E-04"},0.0033098,"full_name=allantoate amidohydrolase. allantoate amidohydrolase. The gene encoding Arabidopsis thaliana Allantoate Amidohydrolase (AtAAH)which catalyzes the allantoate deiminase reaction (EC 3.5.3.9)is expressed in all parts of the plant being consistent with a function in purine turnover in Arabidopsis."]
["AT1G74310","HSP101",337.67,0.74277,0.17518,4.2402,{"v":2.23E-5,"d":"2.23E-05"},{"v":0.00015,"d":"1.50E-04"},"full_name=heat shock protein 101. heat shock protein 101. Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.","AT1G59650","CW14",133.99,0.9544,0.26326,3.6253,{"v":0.000289,"d":"2.89E-04"},0.0019286,"CW14 protein (DUF1336). Encodes CW14.","AT1G64500",null,58.642,1.5438,0.4443,3.4747,{"v":0.000511,"d":"5.11E-04"},0.0033485,"Glutaredoxin family protein. A member of a protein family found in plants and animals that contain conserved C-terminal glutaredoxin-like and putative zinc-binding cysteine-rich domains. It is involved in light stimulated actin bundling and chloroplast movement."]
["AT3G46900","COPT2",78.079,-1.6025,0.37806,-4.2388,{"v":2.25e-05,"d":"2.25E-05"},{"v":0.000151,"d":"1.51E-04"},"full_name=copper transporter 2. copper transporter 2. encodes a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast","AT5G55450","ATLTP4.4",16.022,2.958,0.81635,3.6234,{"v":0.000291,"d":"2.91E-04"},0.0019412,"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT1G62540","FMO GS-OX2",12.808,4.5746,1.3168,3.474,{"v":5.13E-4,"d":"5.13E-04"},3.3544E-3,"full_name=flavin-monooxygenase glucosinolate S-oxygenase 2. flavin-monooxygenase glucosinolate S-oxygenase 2. belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates"]
["AT1G09690",null,6105.9,0.41586,0.098151,4.237,{"v":2.27E-5,"d":"2.27E-05"},{"v":0.000152,"d":"1.52E-04"},"Translation protein SH3-like family protein.","AT4G34138","UGT73B1",41.176,1.8702,0.51638,3.6218,{"v":0.000293,"d":"2.93E-04"},1.9509E-3,"full_name=UDP-glucosyl transferase 73B1. UDP-glucosyl transferase 73B1.","AT4G15260",null,155.53,0.92588,0.26665,3.4722,{"v":0.000516,"d":"5.16E-04"},0.003373,"UDP-Glycosyltransferase superfamily protein."]
["AT1G21910","DREB26",27.125,2.9539,0.69826,4.2303,{"v":2.33e-05,"d":"2.33E-05"},{"v":1.56E-4,"d":"1.56E-04"},"full_name=dehydration response element-binding protein 26. Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.","AT2G26900","BASS2",1013.4,0.4671,0.12909,3.6183,{"v":0.000297,"d":"2.97E-04"},1.9743E-3,"full_name=bile acid:sodium symporter family protein 2. Sodium Bile acid symporter family.","AT5G06640","EXT10",36.667,2.134,0.615,3.4699,{"v":0.000521,"d":"5.21E-04"},0.0033971,"full_name=extensin 10. Proline-rich extensin-like family protein."]
["AT2G24820","TIC55-II",1593.9,-0.4322,0.10222,-4.2282,{"v":2.36e-05,"d":"2.36E-05"},{"v":0.000157,"d":"1.57E-04"},"full_name=translocon at the inner envelope membrane of chloroplasts 55-II. translocon at the inner envelope membrane of chloroplasts 55-II.","AT3G16810","PUM24",604.39,-0.54373,0.15032,-3.6172,{"v":0.000298,"d":"2.98E-04"},0.0019802,"full_name=pumilio 24. pumilio 24. Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.","AT5G35320",null,175.22,0.87985,0.25387,3.4658,{"v":0.000529,"d":"5.29E-04"},0.0034442,"DBH-like monooxygenase."]
["AT1G25425","CLE43",66.497,1.6291,0.38554,4.2254,{"v":2.38e-05,"d":"2.38E-05"},{"v":0.000159,"d":"1.59E-04"},"full_name=CLAVATA3/ESR-RELATED 43. CLAVATA3/ESR-RELATED 43.","AT1G46768","RAP2.1",77.405,-1.4722,0.40718,-3.6157,{"v":0.0003,"d":"3.00E-04"},0.0019888,"full_name=related to AP2 1. related to AP2 1. encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.1). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.9 and RAP2.10.","AT4G30510","ATG18B",131.72,1.034,0.29849,3.4642,{"v":0.000532,"d":"5.32E-04"},0.0034596,"full_name=homolog of yeast autophagy 18 (ATG18) B. yeast autophagy 18 B-like protein."]
["AT1G01140","CIPK9",400.78,0.754,0.17851,4.2238,{"v":2.4e-05,"d":"2.40E-05"},{"v":0.00016,"d":"1.60E-04"},"full_name=CBL-interacting protein kinase 9. CBL-interacting protein kinase 9. Encodes a CBL-interacting protein kinase with similarity to SOS2","AT1G74160","TRM4",343.65,0.64084,0.17725,3.6154,{"v":0.0003,"d":"3.00E-04"},1.9903E-3,"full_name=TON1 Recruiting Motif 4. LONGIFOLIA protein.","AT2G31560",null,75.074,1.2868,0.37152,3.4636,{"v":0.000533,"d":"5.33E-04"},3.467E-3,"signal transducer/transcription protein, putative (DUF1685)."]
["AT1G72710","CKL2",2592.2,-0.38224,0.090571,-4.2203,{"v":2.44E-5,"d":"2.44E-05"},{"v":0.000162,"d":"1.62E-04"},"full_name=casein kinase 1-like protein 2. casein kinase 1-like protein 2. Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus.","AT2G21830",null,132.52,0.99409,0.27511,3.6134,{"v":0.000302,"d":"3.02E-04"},0.0020026,"Cysteine/Histidine-rich C1 domain family protein.","AT3G62570",null,104.4,-1.0852,0.31363,-3.4602,{"v":0.00054,"d":"5.40E-04"},3.506E-3,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT1G25260","RDP",1382.3,0.47809,0.11332,4.2189,{"v":2.45e-05,"d":"2.45E-05"},{"v":1.63E-4,"d":"1.63E-04"},"Ribosomal protein L10 family protein.","AT2G25810","TIP4;1",11.389,4.8485,1.3424,3.6117,{"v":0.000304,"d":"3.04E-04"},0.0020137,"full_name=tonoplast intrinsic protein 4;1. tonoplast intrinsic protein 4;1.","AT1G77800","PRE2",400.38,0.70032,0.20251,3.4582,{"v":5.44E-4,"d":"5.44E-04"},0.0035276,"PHD finger family protein."]
["AT4G27710","CYP709B3",592.8,0.58442,0.1386,4.2165,{"v":2.48E-5,"d":"2.48E-05"},{"v":1.65E-4,"d":"1.65E-04"},"full_name=cytochrome P450, family 709, subfamily B, polypeptide 3. cytochrome P450, family 709, subfamily B, polypeptide 3. member of CYP709B","AT5G44000",null,326.11,-0.71782,0.19889,-3.6092,{"v":0.000307,"d":"3.07E-04"},2.0287E-3,"Glutathione S-transferase family protein.","AT1G23750",null,236.02,-0.7766,0.22488,-3.4534,{"v":0.000554,"d":"5.54E-04"},0.0035838,"Nucleic acid-binding, OB-fold-like protein."]
["AT3G49560","HP30",1390.8,0.51121,0.12125,4.2163,{"v":2.48E-5,"d":"2.48E-05"},{"v":1.65E-4,"d":"1.65E-04"},"Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein.","AT3G49570","LSU3",81.863,-1.2683,0.3515,-3.6082,{"v":0.000308,"d":"3.08E-04"},0.0020356,"full_name=RESPONSE TO LOW SULFUR 3. response to low sulfur 3.","AT1G33980","UPF3",478.46,0.60552,0.17535,3.4532,{"v":0.000554,"d":"5.54E-04"},0.0035847,"Smg-4/UPF3 family protein. Involved in mRNA surveillance, detects exported mRNAs with truncated open reading frames and initiates nonsense-mediated mRNA decay (NMD)"]
["AT4G18730","RPL16B",3780.8,0.46203,0.10976,4.2094,{"v":2.56e-05,"d":"2.56E-05"},{"v":0.000169,"d":"1.69E-04"},"full_name=ribosomal protein L16B. ribosomal protein L16B. encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root and shoot apical meristems and in lateral root primordia. Expression in lateral root primordia is induced by auxin.","AT2G26730",null,148.09,0.9482,0.26295,3.606,{"v":0.000311,"d":"3.11E-04"},2.0504E-3,"Leucine-rich repeat protein kinase family protein.","AT2G47960","TRAPPC13",486.08,0.69935,0.20272,3.4498,{"v":0.000561,"d":"5.61E-04"},3.6262E-3,"trafficking protein particle complex subunit-like protein."]
["AT1G48910","YUC10",23.159,-3.5107,0.83469,-4.206,{"v":2.6e-05,"d":"2.60E-05"},{"v":0.000172,"d":"1.72E-04"},"full_name=YUCCA 10. Flavin-containing monooxygenase family protein. A paternally expressed imprinted gene.","AT1G05490","chr31",24.408,-2.4936,0.692,-3.6034,{"v":0.000314,"d":"3.14E-04"},0.0020674,"full_name=chromatin remodeling 31. chromatin remodeling 31.","AT2G31400","GUN1",1289.4,-0.46811,0.1358,-3.4471,{"v":0.000567,"d":"5.67E-04"},0.0036551,"full_name=genomes uncoupled 1. s uncoupled 1. Encodes a a chloroplast-localized pentatricopeptide-repeat protein involved in regulation of nuclear gene expression."]
["AT5G62400",null,68.666,-2.0104,0.47836,-4.2027,{"v":2.64e-05,"d":"2.64E-05"},{"v":1.74E-4,"d":"1.74E-04"},"transmembrane protein.","AT4G33380",null,443.41,0.60961,0.16926,3.6015,{"v":0.000316,"d":"3.16E-04"},0.0020792,"dimethylallyl, adenosine tRNA methylthiotransferase.","AT1G52030","MBP2",67.592,-1.3682,0.39717,-3.4449,{"v":5.71E-4,"d":"5.71E-04"},0.0036792,"full_name=myrosinase-binding protein 2. myrosinase-binding protein 2. Similar to myrosinase binding proteins which may be involved in metabolizing glucosinolates and forming defense compounds to protect against herbivory. Also similar to lectins and other agglutinating factors. Expressed only in flowers."]
["AT5G48600","SMC3",149.72,1.144,0.27236,4.2003,{"v":2.67e-05,"d":"2.67E-05"},{"v":1.76E-4,"d":"1.76E-04"},"full_name=structural maintenance of chromosome 3. structural maintenance of chromosome 3. member of SMC subfamily","AT4G29070",null,267.27,-0.77494,0.21526,-3.6,{"v":0.000318,"d":"3.18E-04"},2.0899E-3,"Phospholipase A2 family protein.","AT2G45620","URT1",731.57,0.62935,0.18289,3.4412,{"v":0.000579,"d":"5.79E-04"},0.0037273,"Nucleotidyltransferase family protein."]
["AT1G03530","NAF1",631.29,0.57582,0.13721,4.1965,{"v":2.71e-05,"d":"2.71E-05"},{"v":0.000179,"d":"1.79E-04"},"full_name=nuclear assembly factor 1. nuclear assembly factor 1.","AT4G18700","CIPK12",1123.1,-0.45062,0.12521,-3.5988,{"v":0.00032,"d":"3.20E-04"},0.0020977,"full_name=CBL-interacting protein kinase 12. CBL-interacting protein kinase 12. Encodes CBL-interacting protein kinase 12 (CIPK12).","AT1G78680","GGH2",268.37,0.85923,0.24986,3.4388,{"v":0.000584,"d":"5.84E-04"},0.0037574,"full_name=gamma-glutamyl hydrolase 2. gamma-glutamyl hydrolase 2. The Arabidopsis protein AtGGH2 is a gamma-glutamyl hydrolase acting specifically on monoglutamates. The enzyme is involved in the tetrahydrofolate metabolism and located to the vacuole."]
["AT4G37690","GT6",89.927,-1.3835,0.32979,-4.195,{"v":2.73E-5,"d":"2.73E-05"},{"v":0.00018,"d":"1.80E-04"},"Galactosyl transferase GMA12/MNN10 family protein.","AT1G60090","BGLU4",777.73,0.61142,0.16993,3.598,{"v":3.21E-4,"d":"3.21E-04"},2.1021E-3,"full_name=beta glucosidase 4. beta glucosidase 4.","AT1G71850",null,60.719,-1.4386,0.41839,-3.4383,{"v":0.000585,"d":"5.85E-04"},0.0037607,"Ubiquitin carboxyl-terminal hydrolase family protein."]
["AT5G37670","HSP15.7",45.307,2.056,0.49074,4.1895,{"v":2.8E-5,"d":"2.80E-05"},{"v":1.84E-4,"d":"1.84E-04"},"HSP20-like chaperones superfamily protein.","AT1G80890","OEP9.2",179.08,-0.86627,0.24112,-3.5927,{"v":0.000327,"d":"3.27E-04"},0.0021406,"GAG1At protein.","AT1G23030","PUB11",43.289,-1.7259,0.50238,-3.4354,{"v":0.000592,"d":"5.92E-04"},3.7932E-3,"ARM repeat superfamily protein."]
["AT1G10490",null,627.01,0.5722,0.13658,4.1893,{"v":2.8E-5,"d":"2.80E-05"},{"v":1.84E-4,"d":"1.84E-04"},"GNAT acetyltransferase (DUF699).","AT1G74460",null,9.1721,-6.2132,1.7301,-3.5913,{"v":0.000329,"d":"3.29E-04"},0.0021507,"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT3G26280","CYP71B4",25.863,2.238,0.65193,3.4329,{"v":0.000597,"d":"5.97E-04"},0.0038264,"full_name=cytochrome P450, family 71, subfamily B, polypeptide 4. cytochrome P450, family 71, subfamily B, polypeptide 4. cytochrome P450 monooxygenase"]
["AT3G57260","BGL2",12.658,7.0579,1.6855,4.1875,{"v":2.82e-05,"d":"2.82E-05"},{"v":1.85E-4,"d":"1.85E-04"},"full_name=beta-1,3-glucanase 2. beta-1,3-glucanase 2. beta 1,3-glucanase","AT5G05365","ATHMP44",51.581,-1.7231,0.4799,-3.5906,{"v":3.3E-4,"d":"3.30E-04"},0.0021542,"Heavy metal transport/detoxification superfamily protein.","ATMG00730","COX3",14.375,3.3697,0.98213,3.431,{"v":0.000601,"d":"6.01E-04"},0.0038488,"Encodes cytochrome c oxidase subunit 3."]
["AT3G03550","ATL51",175.34,1.0084,0.24094,4.1853,{"v":2.85e-05,"d":"2.85E-05"},{"v":0.000186,"d":"1.86E-04"},"RING/U-box superfamily protein.","AT2G45710",null,548.55,-0.55996,0.15606,-3.5882,{"v":0.000333,"d":"3.33E-04"},0.0021707,"Zinc-binding ribosomal protein family protein.","AT3G24315","AtSec20",273.15,0.72103,0.21028,3.429,{"v":0.000606,"d":"6.06E-04"},0.0038699,"Sec20 family protein."]
["AT5G67590","FRO1",876.59,0.51826,0.12395,4.1813,{"v":2.9E-5,"d":"2.90E-05"},{"v":0.000189,"d":"1.89E-04"},"full_name=FROSTBITE1. NADH-ubiquinone oxidoreductase-like protein. Mutant leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Encode a protein with high similarity to the 18-kD Fe-S subunit of complex I (NADH dehydrogenase, EC 1.6.5.3) in the mitochondrial electron transfer chain.","AT2G03680","SPR1",901.86,0.55422,0.15461,3.5847,{"v":0.000338,"d":"3.38E-04"},2.1974E-3,"full_name=SPIRAL1. spiral1. The SPR1 gene encodes a plant-specific 12-kD protein which has a repeated motif at both ends, separated by a predicted rod-like domain, suggesting that it may act as an intermolecular linker. Ubiquitously expressed and belongs to a six-member gene family in Arabidopsis; expressed in transgenic seedlings localized to microtubules within the cortical array, preprophase band, phragmoplast, and mitotic spindle.","AT2G28740","HIS4",223.33,-0.81548,0.23809,-3.4251,{"v":0.000615,"d":"6.15E-04"},0.0039212,"full_name=histone H4. histone H4. histone 4"]
["AT5G20050",null,106.56,-1.2995,0.31095,-4.1793,{"v":2.92e-05,"d":"2.92E-05"},{"v":0.000191,"d":"1.91E-04"},"Protein kinase superfamily protein.","AT5G18520","Cand7",884.23,0.4961,0.13844,3.5835,{"v":3.39E-4,"d":"3.39E-04"},2.2047E-3,"full_name=candidate G-protein Coupled Receptor 7. Lung seven transmembrane receptor family protein. Encodes a candidate G-protein Coupled Receptor that is involved in the regulation of root growth by bacterial N-acyl-homoserine lactones (AHLs) and plays a role in mediating interactions between plants and microbes.","AT3G23400","FIB4",548.04,0.62049,0.1812,3.4243,{"v":0.000616,"d":"6.16E-04"},0.0039288,"full_name=fibrillin 4. Plastid-lipid associated protein PAP / fibrillin family protein. Encodes FIBRILLIN 4 (FIB4). The fibrillins are a large family of chloroplast proteins that have been linked with stress tolerance and disease resistance. FIBRILLIN 4 is required for plastoglobule development and stress resistance."]
["AT2G38180",null,149.15,-1.0699,0.25607,-4.1782,{"v":2.94E-5,"d":"2.94E-05"},{"v":1.92E-4,"d":"1.92E-04"},"SGNH hydrolase-type esterase superfamily protein.","AT3G62290","ARFA1E",5435.3,0.38916,0.10862,3.5828,{"v":0.00034,"d":"3.40E-04"},0.0022094,"full_name=ADP-ribosylation factor A1E. ADP-ribosylation factor A1E. A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.","AT1G56090",null,135.79,0.95591,0.2792,3.4238,{"v":0.000618,"d":"6.18E-04"},0.0039333,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT3G10420","SPD1",1014.5,-0.70119,0.16799,-4.174,{"v":2.99e-05,"d":"2.99E-05"},{"v":1.95E-4,"d":"1.95E-04"},"full_name=SEEDLING PLASTID DEVELOPMENT 1. P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT3G01060",null,119.23,-1.0258,0.2865,-3.5806,{"v":0.000343,"d":"3.43E-04"},0.0022254,"lysine-tRNA ligase.","AT5G39080",null,219.26,0.82392,0.24077,3.422,{"v":0.000622,"d":"6.22E-04"},0.0039557,"HXXXD-type acyl-transferase family protein."]
["AT3G06420","ATG8H",281.58,-0.80768,0.19359,-4.172,{"v":3.02e-05,"d":"3.02E-05"},{"v":0.000196,"d":"1.96E-04"},"full_name=autophagy 8h. Ubiquitin-like superfamily protein.","AT1G32550","FdC2",201.89,0.80026,0.22364,3.5783,{"v":0.000346,"d":"3.46E-04"},0.0022422,"full_name=ferredoxin C 2. 2Fe-2S ferredoxin-like superfamily protein. Encodes FdC2, a ferredoxin protein capable of alternative electron partitioning. FdC1 level increases in conditions of acceptor limitation at PSI.","AT2G22720",null,642.04,0.62057,0.1815,3.4192,{"v":0.000628,"d":"6.28E-04"},0.0039912,"SPT2 chromatin protein."]
["AT1G08630","THA1",807.15,-0.6564,0.15748,-4.1682,{"v":3.07e-05,"d":"3.07E-05"},{"v":0.0002,"d":"2.00E-04"},"full_name=threonine aldolase 1. threonine aldolase 1. Encodes a threonine aldolase, involved in threonine degradation to glycine. Primarily expressed in seeds and seedlings.","AT2G35500","SKL2",349.26,0.6576,0.18389,3.576,{"v":0.000349,"d":"3.49E-04"},0.00226,"full_name=shikimate kinase-like 2. shikimate kinase like 2. Encodes a protein with some sequence similarity to shikimate kinases, but a truncated form of this protein (lacking a putative N-terminal chloroplast transit peptide) does not have shikimate kinase activity in vitro.","AT3G60350","ARABIDILLO-2",286.34,0.73368,0.2146,3.4188,{"v":6.29E-4,"d":"6.29E-04"},0.003994,"full_name=ARABIDILLO-2. ARABIDILLO-2. ARABIDILLO-2 and its homolog, ARABIDILLO -1, are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-2 promote lateral root development. Mutant plants form fewer lateral roots, while ARABIDILLO-2-overexpressing lines produce more lateral roots than wild-type seedlings."]
["AT1G72680","CAD1",938.53,-0.48921,0.11754,-4.1621,{"v":3.15E-5,"d":"3.15E-05"},{"v":2.05E-4,"d":"2.05E-04"},"full_name=cinnamyl-alcohol dehydrogenase. cinnamyl-alcohol dehydrogenase.","AT5G54000",null,9.0748,-6.1992,1.7351,-3.5727,{"v":0.000353,"d":"3.53E-04"},0.0022849,"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT2G16700","ADF5",75.426,1.314,0.38474,3.4152,{"v":0.000637,"d":"6.37E-04"},0.0040402,"full_name=actin depolymerizing factor 5. actin depolymerizing factor 5. Encodes actin depolymerizing factor 5 (ADF5)."]
["AT1G02560","CLPP5",2365,0.41861,0.10062,4.1605,{"v":3.18E-5,"d":"3.18E-05"},{"v":0.000206,"d":"2.06E-04"},"full_name=nuclear encoded CLP protease 5. nuclear encoded CLP protease 5. One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).","AT1G78830",null,455.11,-0.69739,0.19535,-3.57,{"v":3.57E-4,"d":"3.57E-04"},0.0023057,"Curculin-like (mannose-binding) lectin family protein.","AT4G21520",null,74.592,-1.2504,0.3665,-3.4118,{"v":0.000645,"d":"6.45E-04"},0.0040846,"Transducin/WD40 repeat-like superfamily protein."]
["AT1G57790","ATFDR1",144.6,-1.0978,0.26396,-4.1589,{"v":3.2e-05,"d":"3.20E-05"},{"v":0.000207,"d":"2.07E-04"},"F-box family protein.","AT5G58210",null,230.21,-0.80433,0.2254,-3.5684,{"v":3.59E-4,"d":"3.59E-04"},0.0023164,"hydroxyproline-rich glycoprotein family protein.","AT5G02820","RHL2",177.5,-0.89795,0.26342,-3.4089,{"v":0.000652,"d":"6.52E-04"},0.0041226,"full_name=ROOT HAIRLESS 2. Spo11/DNA topoisomerase VI, subunit A protein. Involved in the patterning and shape of leaf trichomes. Encodes the DNA topoisomerase VI SPO11-3, involved in endoreduplication"]
["AT1G52660",null,30.043,-2.7427,0.65969,-4.1576,{"v":3.22e-05,"d":"3.22E-05"},{"v":0.000208,"d":"2.08E-04"},"P-loop containing nucleoside triphosphate hydrolases superfamily protein.","AT5G24660","LSU2",34.652,-2.0385,0.57133,-3.568,{"v":0.00036,"d":"3.60E-04"},0.0023196,"full_name=RESPONSE TO LOW SULFUR 2. response to low sulfur 2.","AT5G45350",null,325.15,0.77376,0.22699,3.4088,{"v":0.000652,"d":"6.52E-04"},0.0041226,"proline-rich family protein."]
["AT4G39850","ABCD1",1280.4,0.49993,0.12039,4.1525,{"v":3.29E-5,"d":"3.29E-05"},{"v":2.13E-4,"d":"2.13E-04"},"full_name=ATP-binding cassette D1. peroxisomal ABC transporter 1. Encodes a peroxisomal protein of the ATP binding cassette (ABC) transporter class (PMP subfamily) with significant identity to the human X-linked adrenoleukodystrophy protein (ALDP). The gene product promotes germination and represses embryo dormancy. ABI3, ABA1, FUS3 and LEC1 are epistatic to this gene. Mutants accumulate fatty acyl CoA suggesting a defect in uptake of fatty acyl CoA into the peroxisome.","AT3G19450","ATCAD4",168.95,0.89974,0.25233,3.5657,{"v":0.000363,"d":"3.63E-04"},0.0023369,"GroES-like zinc-binding alcohol dehydrogenase family protein. Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates.","AT5G11450","PPD5",643.47,-0.56157,0.16486,-3.4065,{"v":0.000658,"d":"6.58E-04"},0.0041523,"full_name=PsbP domain protein 5. PsbP domain protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein)."]
["AT1G66250",null,194.51,-0.95734,0.23094,-4.1455,{"v":3.39e-05,"d":"3.39E-05"},{"v":0.000219,"d":"2.19E-04"},"O-Glycosyl hydrolases family 17 protein.","AT2G44860","RPL24C",1379.5,-0.4783,0.13432,-3.561,{"v":0.000369,"d":"3.69E-04"},0.0023751,"Ribosomal protein L24e family protein.","ATMG00510","nad7",7.2061,6.2966,1.8492,3.4052,{"v":0.000661,"d":"6.61E-04"},0.0041659]
["AT1G52320",null,460.06,-0.65942,0.15927,-4.1402,{"v":3.47e-05,"d":"3.47E-05"},{"v":2.24E-4,"d":"2.24E-04"},"kinesin-like protein.","AT1G67100","LBD40",1522.1,-1.6816,0.47237,-3.5599,{"v":0.000371,"d":"3.71E-04"},2.3823E-3,"full_name=LOB domain-containing protein 40. LOB domain-containing protein 40.","AT5G17910",null,264.91,0.74278,0.21821,3.4039,{"v":0.000664,"d":"6.64E-04"},0.0041804,"cardiomyopathy-associated protein."]
["AT4G18280",null,354.56,-0.73864,0.17851,-4.1377,{"v":3.51e-05,"d":"3.51E-05"},{"v":0.000226,"d":"2.26E-04"},"glycine-rich cell wall protein-like protein.","AT5G13030","SELO",969.85,-0.46884,0.13173,-3.5589,{"v":0.000372,"d":"3.72E-04"},0.0023895,"selenoprotein O.","AT4G02790","EMB3129",378.83,-0.68826,0.20223,-3.4034,{"v":0.000666,"d":"6.66E-04"},0.0041863,"full_name=EMBRYO DEFECTIVE 3129. GTP-binding family protein."]
["AT2G37870",null,682.5,0.68687,0.16629,4.1306,{"v":3.62e-05,"d":"3.62E-05"},{"v":2.33E-4,"d":"2.33E-04"},"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT2G42960",null,189.38,0.97115,0.27295,3.558,{"v":0.000374,"d":"3.74E-04"},0.0023938,"Protein kinase superfamily protein.","AT2G27440",null,6.9866,6.2426,1.8348,3.4023,{"v":0.000668,"d":"6.68E-04"},0.0041959,"pseudogene. pseudogene of rac GTPase activating protein"]
["AT4G34110","PAB2",7155.2,0.35644,0.086319,4.1294,{"v":3.64e-05,"d":"3.64E-05"},{"v":2.34E-4,"d":"2.34E-04"},"full_name=poly(A) binding protein 2. poly(A) binding protein 2. Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins.","AT1G32700",null,208.78,-1.0075,0.28342,-3.5549,{"v":0.000378,"d":"3.78E-04"},0.0024192,"PLATZ transcription factor family protein.","AT5G58410",null,570.16,0.55477,0.16316,3.4002,{"v":0.000673,"d":"6.73E-04"},0.0042217,"HEAT/U-box domain-containing protein."]
["AT4G21450",null,412.06,-0.66966,0.16225,-4.1274,{"v":3.67e-05,"d":"3.67E-05"},{"v":0.000235,"d":"2.35E-04"},"PapD-like superfamily protein.","AT1G19380",null,51.736,-1.5973,0.44976,-3.5513,{"v":0.000383,"d":"3.83E-04"},0.0024481,"sugar, putative (DUF1195).","AT4G21860","MSRB2",931.61,0.57092,0.16799,3.3987,{"v":0.000677,"d":"6.77E-04"},0.0042401,"full_name=methionine sulfoxide reductase B 2. methionine sulfoxide reductase B 2."]
["AT3G11620",null,139.38,-1.09,0.2644,-4.1227,{"v":3.74e-05,"d":"3.74E-05"},{"v":0.00024,"d":"2.40E-04"},"alpha/beta-Hydrolases superfamily protein.","AT4G26780","AR192",346.59,-0.71704,0.20191,-3.5513,{"v":0.000383,"d":"3.83E-04"},0.0024481,"Co-chaperone GrpE family protein. unknown function","AT5G20020","RAN2",1001.9,-0.62511,0.18404,-3.3966,{"v":0.000682,"d":"6.82E-04"},4.2705E-3,"full_name=RAS-related GTP-binding nuclear protein 2. RAS-related GTP-binding nuclear protein 2. A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression."]
["AT1G53645",null,636.87,0.59616,0.14482,4.1166,{"v":3.84e-05,"d":"3.84E-05"},{"v":0.000246,"d":"2.46E-04"},"hydroxyproline-rich glycoprotein family protein.","AT1G30530","UGT78D1",607.83,-0.58549,0.16505,-3.5473,{"v":0.000389,"d":"3.89E-04"},0.0024822,"full_name=UDP-glucosyl transferase 78D1. UDP-glucosyl transferase 78D1. The At1g30530 gene encodes a UDP-rhamnose:flavonol-3-O-rhamnosyltransferase (UGT78D1) attaching a rhamnosyl residue to the 3-O-position of the flavonols kaempferol and quercetin","AT2G03800","GEK1",72.206,-1.267,0.37328,-3.3941,{"v":0.000688,"d":"6.88E-04"},0.0043036,"full_name=GEKO1. D-aminoacyl-tRNA deacylase. encodes a D-aminoacyl-tRNA deacylase. Involved in detoxification of D-aminoacyl-tRNA. Mutants also show ethanol-hypersensitive phenotype."]
["AT5G64100","PRX69",19.082,5.178,1.2591,4.1126,{"v":3.91e-05,"d":"3.91E-05"},{"v":0.00025,"d":"2.50E-04"},"Peroxidase superfamily protein.","AT1G28100",null,115.83,0.99583,0.28099,3.544,{"v":0.000394,"d":"3.94E-04"},0.0025094,"hypothetical protein.","AT3G49810","ATPUB30",123.46,-1.0705,0.31565,-3.3915,{"v":0.000695,"d":"6.95E-04"},0.0043382,"ARM repeat superfamily protein. Encodes a protein with E3 ubiquitin ligase activity that is involved in negative regulation of salt stress tolerance during germination."]
["AT3G56360",null,1851,-0.44697,0.10881,-4.1079,{"v":3.99e-05,"d":"3.99E-05"},{"v":0.000255,"d":"2.55E-04"},"hypothetical protein.","AT1G34060","TAR4",32.466,-2.178,0.61478,-3.5427,{"v":0.000396,"d":"3.96E-04"},0.0025186,"Pyridoxal phosphate (PLP)-dependent transferases superfamily protein.","AT2G20770","GCL2",123.8,0.99695,0.29417,3.389,{"v":0.000701,"d":"7.01E-04"},4.3723E-3,"full_name=GCR2-like 2. GCR2-like 2. Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor.GCL2 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase."]
["AT2G31160","LSH3",195.68,-0.96865,0.23586,-4.1068,{"v":4.01e-05,"d":"4.01E-05"},{"v":0.000256,"d":"2.56E-04"},"full_name=LIGHT SENSITIVE HYPOCOTYLS 3. LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640).","AT2G04110",null,50.097,1.591,0.44923,3.5416,{"v":0.000398,"d":"3.98E-04"},2.5274E-3,"pseudogene. pseudogene of unknown protein","AT3G63130","RANGAP1",324.55,-0.67707,0.19989,-3.3872,{"v":0.000706,"d":"7.06E-04"},0.0043979,"full_name=RAN GTPase activating protein 1. RAN GTPase activating protein 1. Encodes a RAN GTPase activating protein involved in nuclear import, cell plate formation and mitotic spindle formation."]
["AT2G41800","TEB",69.145,1.5605,0.38001,4.1064,{"v":4.02e-05,"d":"4.02E-05"},{"v":0.000256,"d":"2.56E-04"},"imidazolonepropionase (Protein of unknown function, DUF642).","AT1G68470",null,49.302,-1.6795,0.47441,-3.5401,{"v":0.0004,"d":"4.00E-04"},2.539E-3,"Exostosin family protein.","AT2G31170","SYCO ARATH",224.76,-0.78977,0.23335,-3.3845,{"v":0.000713,"d":"7.13E-04"},4.437E-3,"full_name=cysteinyl t-RNA synthetase. Cysteinyl-tRNA synthetase, class Ia family protein. Encodes the cysteinyl t-RNA synthetase SYCO ARATH (SYCO), which is expressed and required in the central cell but not in the antipodals. SYCO, localized to the mitochondria, is necessary for mitochondrial cristae integrity. Mutation of this gene affects the lifespan of adjacent accessory cells."]
["AT2G29300",null,205.58,-0.95187,0.23229,-4.0977,{"v":4.17e-05,"d":"4.17E-05"},{"v":0.000266,"d":"2.66E-04"},"NAD(P)-binding Rossmann-fold superfamily protein.","AT2G47120",null,9.6584,-6.2825,1.7761,-3.5372,{"v":0.000404,"d":"4.04E-04"},0.0025632,"NAD(P)-binding Rossmann-fold superfamily protein.","AT1G30960","ERA-2",79.915,-1.2844,0.37962,-3.3834,{"v":0.000716,"d":"7.16E-04"},0.0044465,"GTP-binding family protein."]
["AT2G31660","SAD2",868.81,0.52882,0.12911,4.0959,{"v":4.21E-5,"d":"4.21E-05"},{"v":0.000267,"d":"2.67E-04"},"full_name=SUPER SENSITIVE TO ABA AND DROUGHT2. ARM repeat superfamily protein. SAD2 (super sensitive to ABA and drought 2) encodes an importin beta-domain family protein likely to be involved in nuclear transport in ABA signaling. Subcellular localization of GFP-tagged SAD2 showed a predominantly nuclear localization, consistent with a role for SAD2 in nuclear transport. Mutation of SAD2 in Arabidopsis alters abscisic acid sensitivity. SAD2 was ubiquitously expressed at low levels in all tissues except flowers. SAD2 expression was not induced by ABA or stress. Loss of function mutations in SAD2 exhibit increased tolerance for UV stress, increased production of UV protective secondary metabolites and suppression of nuclear localization of MYB4 (a repressor of UV stress response genes). Regulates microRNA activity.","AT2G36990","SIGF",777.72,0.46543,0.13172,3.5333,{"v":0.00041,"d":"4.10E-04"},0.002597,"full_name=RNApolymerase sigma-subunit F. RNApolymerase sigma-subunit F. Encodes a general sigma factor in chloroplasts and is probably responsible for the recognition of sigma 70 type standard bacteria-type multi-subunit RNA polymerase (PEP) promoters in young cotyledons. It is a substrate for regulatory phosphorylation by cpCK2, a nuclear-coded plastid-targeted casein kinase 2, that has been implicated as a key component in plant sigma factor phosphorylation and transcriptional regulation.","AT5G19780","TUA5",1186.4,-0.47065,0.1392,-3.3811,{"v":0.000722,"d":"7.22E-04"},0.0044772,"full_name=tubulin alpha-5. tubulin alpha-5. Encodes an isoform of alpha tubulin. Closely related to adjacent gene TUA3 suggesting recent duplication."]
["AT1G74270",null,1317.5,0.49604,0.1212,4.0928,{"v":4.26e-05,"d":"4.26E-05"},{"v":0.000271,"d":"2.71E-04"},"Ribosomal protein L35Ae family protein.","AT3G58780","SHP1",25.016,-3.421,0.96823,-3.5332,{"v":0.00041,"d":"4.10E-04"},0.002597,"full_name=SHATTERPROOF 1. K-box region and MADS-box transcription factor family protein. One of two genes (SHP1 and SHP2) that are required for fruit dehiscence. The two genes control dehiscence zone differentiation and promote the lignification of adjacent cells.","AT1G21880","LYM1",427.13,-0.60619,0.17934,-3.3801,{"v":0.000725,"d":"7.25E-04"},0.0044915,"full_name=lysm domain GPI-anchored protein 1 precursor. lysm domain GPI-anchored protein 1 precursor. Encodes a lysin-motif protein mediating bacterial peptidoglycan sensing and immunity to bacterial infection. Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant."]
["AT2G36870","XTH32",33.962,-2.3582,0.57673,-4.089,{"v":4.33e-05,"d":"4.33E-05"},{"v":0.000275,"d":"2.75E-04"},"full_name=xyloglucan endotransglucosylase/hydrolase 32. xyloglucan endotransglucosylase/hydrolase 32. Encodes a xyloglucan endotransglycosylase/hydrolase.","AT3G60240","EIF4G",1343.7,-0.4294,0.12165,-3.5297,{"v":0.000416,"d":"4.16E-04"},0.0026285,"full_name=eukaryotic translation initiation factor 4G. eukaryotic translation initiation factor 4G. protein synthesis initiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication.","AT4G27650","PEL1",247.49,0.79279,0.23462,3.3791,{"v":7.27E-4,"d":"7.27E-04"},0.0045038,"full_name=PELOTA. Eukaryotic release factor 1 (eRF1) family protein. Encodes Arabidopsis homolog of Drosophila pelota protein."]
["AT1G79440","ALDH5F1",1677.5,-0.43124,0.1055,-4.0875,{"v":4.36e-05,"d":"4.36E-05"},{"v":0.000276,"d":"2.76E-04"},"full_name=aldehyde dehydrogenase 5F1. aldehyde dehydrogenase 5F1. Encodes a mitochondrial succinic semialdehyde dehydrogenase (SSADH). Nomenclature according to Kirch, et al (2004).","AT5G45480",null,123.16,0.9758,0.27666,3.527,{"v":0.00042,"d":"4.20E-04"},0.0026526,"transmembrane protein, putative (DUF594).","AT5G06700","TBR",226.01,-0.76733,0.22718,-3.3776,{"v":0.000731,"d":"7.31E-04"},0.0045233,"trichome birefringence-like protein (DUF828). Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). A tbr mutant is impaired in its ability to deposit secondary wall cellulose in specific cell types, most notably in trichomes."]
["AT4G35160","ASMT",1733.2,-0.39875,0.097647,-4.0835,{"v":4.44e-05,"d":"4.44E-05"},{"v":0.00028,"d":"2.80E-04"},"O-methyltransferase family protein.","AT1G16520","NAIP2",496.34,0.60085,0.17057,3.5226,{"v":0.000427,"d":"4.27E-04"},0.0026915,"interactor of constitutive active ROPs protein.","AT5G25240",null,21.432,2.5719,0.76256,3.3727,{"v":0.000744,"d":"7.44E-04"},0.0045949,"stress induced protein."]
["AT1G20730",null,115.82,-1.9372,0.47445,-4.083,{"v":4.45e-05,"d":"4.45E-05"},{"v":2.81E-4,"d":"2.81E-04"},"transport/golgi organization-like protein, putative (DUF833).","AT3G49990",null,633.67,-0.54572,0.15495,-3.5219,{"v":4.28E-4,"d":"4.28E-04"},2.6974E-3,"Low temperature viability protein.","AT5G58020","RTF2",204.2,0.78977,0.23437,3.3698,{"v":0.000752,"d":"7.52E-04"},0.0046416,"RTF2 RING-finger protein."]
["AT1G53270","ABCG10",98.573,-1.4553,0.35664,-4.0806,{"v":4.49E-5,"d":"4.49E-05"},{"v":0.000284,"d":"2.84E-04"},"full_name=ATP-binding cassette G10. ABC-2 type transporter family protein.","AT2G22540","SVP",10.472,4.8315,1.3733,3.5182,{"v":0.000434,"d":"4.34E-04"},0.0027318,"full_name=SHORT VEGETATIVE PHASE. K-box region and MADS-box transcription factor family protein. Encodes a nuclear protein that acts as a floral repressor and that functions within the thermosensory pathway. SVP represses FT expression via direct binding to the vCArG III motif in the FT promoter.","AT5G07430",null,8.197,-6.4905,1.9265,-3.3691,{"v":7.54E-4,"d":"7.54E-04"},0.0046477,"Pectin lyase-like superfamily protein."]
["AT5G24200",null,11.62,6.9352,1.702,4.0747,{"v":4.61e-05,"d":"4.61E-05"},{"v":2.9E-4,"d":"2.90E-04"},"alpha/beta-Hydrolases superfamily protein.","AT1G10910","EMB3103",346.79,0.61972,0.17628,3.5155,{"v":0.000439,"d":"4.39E-04"},0.0027554,"full_name=EMBRYO DEFECTIVE 3103. Pentatricopeptide repeat (PPR) superfamily protein.","AT3G10525","LGO",49.112,-1.5445,0.45871,-3.367,{"v":0.00076,"d":"7.60E-04"},0.004675,"full_name=LOSS OF GIANT CELLS FROM ORGANS. LOSS OF GIANT CELLS FROM ORGANS. Encodes LGO (loss of giant cells from organs) required for endoreduplication in sepal giant cell formation. Giant cells in both leaves and sepals are absent in lgo mutants. LGO is a member of a plant specific cell cycle inhibitor family SIAMESE and was originally named as SMR1(SIAMESE RELATED 1)."]
["AT1G29630",null,127.51,1.1302,0.27752,4.0725,{"v":4.65e-05,"d":"4.65E-05"},{"v":0.000293,"d":"2.93E-04"},"5'-3' exonuclease family protein.","AT5G24655","LSU4",15.856,-5.5481,1.5803,-3.5108,{"v":0.000447,"d":"4.47E-04"},0.0028013,"full_name=RESPONSE TO LOW SULFUR 4. response to low sulfur 4.","AT1G77940",null,2153.8,-0.52742,0.15672,-3.3653,{"v":0.000765,"d":"7.65E-04"},0.0046978,"Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein."]
["AT3G53460","CP29",7884.2,0.4861,0.11937,4.0721,{"v":4.66e-05,"d":"4.66E-05"},{"v":0.000293,"d":"2.93E-04"},"full_name=chloroplast RNA-binding protein 29. chloroplast RNA-binding protein 29. Encodes a nuclear gene with a consensus RNA-binding domain that is localized to the chloroplast.","AT5G49170",null,17.423,2.8044,0.79894,3.5102,{"v":0.000448,"d":"4.48E-04"},2.807E-3,"hypothetical protein.","AT4G19860",null,615.28,0.55916,0.16616,3.3652,{"v":0.000765,"d":"7.65E-04"},0.0046992,"alpha/beta-Hydrolases superfamily protein. Encodes a cytosolic calcium-independent phospholipase A."]
["AT3G15354","SPA3",94.712,1.3411,0.32968,4.068,{"v":4.74E-5,"d":"4.74E-05"},{"v":0.000298,"d":"2.98E-04"},"full_name=SPA1-related 3. SPA1-related 3. Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA3 (and SPA4) predominantly regulates elongation growth in adult plants.","AT1G56230",null,109.65,1.0057,0.28673,3.5074,{"v":0.000453,"d":"4.53E-04"},0.0028328,"enolase (DUF1399).","AT5G03860","MLS",20708,-0.38323,0.11396,-3.3629,{"v":0.000771,"d":"7.71E-04"},0.0047308,"full_name=malate synthase. malate synthase. Encodes a protein with malate synthase activity."]
["AT1G79040","PSBR",6775.2,-0.31625,0.077771,-4.0664,{"v":4.77e-05,"d":"4.77E-05"},{"v":0.0003,"d":"3.00E-04"},"full_name=photosystem II subunit R. photosystem II subunit R. Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ.","AT2G02580","CYP71B9",8.6373,-6.1263,1.7471,-3.5065,{"v":0.000454,"d":"4.54E-04"},0.0028389,"full_name=cytochrome P450, family 71, subfamily B, polypeptide 9. cytochrome P450, family 71, subfamily B, polypeptide 9. member of CYP71B","AT1G62300","WRKY6",113.09,1.0388,0.30898,3.3619,{"v":0.000774,"d":"7.74E-04"},0.0047433,"WRKY family transcription factor. Encodes a transcription factor WRKY6. Regulates Phosphate1 (Pho1) expression in response to low phosphate (Pi) stress."]
["AT1G12640","LPLAT1",483.21,-0.61087,0.15026,-4.0653,{"v":4.8e-05,"d":"4.80E-05"},{"v":3.01E-4,"d":"3.01E-04"},"full_name=lysophospholipid acyltransferase 1. MBOAT (membrane bound O-acyl transferase) family protein. Encodes a lysophosphatidylcholine acyltransferase (LPCAT). Participates in the Lands cycle in developing seeds.","AT2G22200",null,15.141,3.0092,0.85911,3.5027,{"v":0.000461,"d":"4.61E-04"},0.0028746,"Integrase-type DNA-binding superfamily protein. encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.","AT3G01270",null,16.495,-3.0547,0.90964,-3.3581,{"v":7.85E-4,"d":"7.85E-04"},0.0047994,"Pectate lyase family protein."]
["AT3G23490","CYN",1919.4,-0.60307,0.14841,-4.0634,{"v":4.84e-05,"d":"4.84E-05"},{"v":0.000303,"d":"3.03E-04"},"full_name=cyanase. cyanase. Encodes a cyanase that catalyzes the bicarbonate-dependent breakdown of cyanate to ammonia and bicarbonate. CYN forms a hexadecamer and is believed to be a cytosolic protein. Long-term exposure to NaCl increases CYN transcript levels. It is also expressed at higher levels in flowers relative to stems, roots, and seedlings.","AT3G03310","LCAT3",246.56,-0.7802,0.22285,-3.5011,{"v":0.000463,"d":"4.63E-04"},2.8901E-3,"full_name=lecithin:cholesterol acyltransferase 3. lecithin:cholesterol acyltransferase 3.","AT5G52950",null,60.7,-1.3619,0.40573,-3.3567,{"v":0.000789,"d":"7.89E-04"},4.8214E-3,"LIM domain protein."]
["AT1G04380",null,63.992,-1.5821,0.38973,-4.0594,{"v":4.92e-05,"d":"4.92E-05"},{"v":0.000308,"d":"3.08E-04"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. encodes a protein similar to a 2-oxoglutarate-dependent dioxygenase","AT1G08560","SYP111",77.141,1.486,0.4246,3.4998,{"v":4.66E-4,"d":"4.66E-04"},0.0029002,"full_name=syntaxin of plants 111. syntaxin of plants 111. member of SYP11 syntaxin Gene Family","AT4G14385",null,235.21,0.7634,0.2275,3.3556,{"v":0.000792,"d":"7.92E-04"},0.0048333,"histone acetyltransferase subunit NuA4-domain protein."]
["AT1G74460",null,52.194,-1.7483,0.43076,-4.0587,{"v":4.93e-05,"d":"4.93E-05"},{"v":0.000308,"d":"3.08E-04"},"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT4G27960","UBC9",625.45,-0.50369,0.14396,-3.4988,{"v":0.000467,"d":"4.67E-04"},0.0029076,"full_name=ubiquitin conjugating enzyme 9. ubiquitin conjugating enzyme 9. ubiquitin conjugating enzyme","AT5G51990","CBF4",11.912,4.46,1.3304,3.3523,{"v":0.000801,"d":"8.01E-04"},0.0048872,"full_name=C-repeat-binding factor 4. C-repeat-binding factor 4. encodes a member of the DREB subfamily A-1 of ERF/AP2 transcription factor family (CBF4). The protein contains one AP2 domain. There are six members in this subfamily, including CBF1, CBF2, and CBF3. This gene is involved in response to drought stress and abscisic acid treatment, but not to low temperature."]
["AT5G56670",null,2910.4,0.445,0.10973,4.0555,{"v":5e-05,"d":"5.00E-05"},{"v":0.000312,"d":"3.12E-04"},"Ribosomal protein S30 family protein.","AT5G56100",null,244.55,-0.72453,0.20718,-3.497,{"v":0.00047,"d":"4.70E-04"},2.9234E-3,"glycine-rich protein / oleosin.","AT1G02120","VAD1",554.98,0.62424,0.18632,3.3503,{"v":0.000807,"d":"8.07E-04"},0.0049161,"full_name=VASCULAR ASSOCIATED DEATH1. GRAM domain family protein. Encodes VAD1 (Vascular Associated Death1), a regulator of cell death and defense responses in vascular tissues. VAD1 is a putative membrane associated protein and contains a GRAM domain. vad1 is a lesion mimic mutant that exhibits light conditional appearance of propagative HR (hypersensitive response)-like lesions along the vascular system."]
["AT3G08885",null,31.314,2.4306,0.59946,4.0546,{"v":5.02E-5,"d":"5.02E-05"},{"v":0.000313,"d":"3.13E-04"},"pseudogene.","AT1G16860","SHOU4L",393.64,0.60381,0.1727,3.4963,{"v":0.000472,"d":"4.72E-04"},0.0029303,"Ubiquitin-specific protease family C19-related protein.","AT1G61690",null,336.24,0.72433,0.21628,3.3491,{"v":0.000811,"d":"8.11E-04"},0.004936,"phosphoinositide binding protein."]
["AT5G59480",null,108.65,-1.2205,0.30133,-4.0504,{"v":5.11e-05,"d":"5.11E-05"},{"v":0.000318,"d":"3.18E-04"},"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein.","AT4G35580","NTL9",402.02,-0.63851,0.18276,-3.4937,{"v":0.000476,"d":"4.76E-04"},0.0029549,"full_name=NAC transcription factor-like 9. NAC transcription factor-like 9. Encodes a calmodulin-binding NAC protein (CBNAC). Contains calmodulin-binding domain in the C-terminus of the protein. Functions as a calmodulin-regulated transcriptional repressor.","AT1G48420","D-CDES",461.15,0.59308,0.17716,3.3478,{"v":0.000815,"d":"8.15E-04"},0.0049531,"full_name=D-cysteine desulfhydrase. D-cysteine desulfhydrase. Encodes an enzyme that decomposes D-cysteine into pyruvate, H2S, and NH3. Only D-cysteine but not L-cysteine was converted by D-CDes to pyruvate, H2S, and NH3. There is conflicting evidence on its 1-aminocyclopropane-1-carboxylate deaminase activity. Involved in regulating ethylene levels."]
["AT4G09900","MES12",331.49,0.88469,0.21864,4.0464,{"v":5.2e-05,"d":"5.20E-05"},{"v":0.000323,"d":"3.23E-04"},"full_name=methyl esterase 12. methyl esterase 12. Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.","AT5G18280","APY2",396.6,0.59888,0.1716,3.49,{"v":0.000483,"d":"4.83E-04"},0.0029916,"full_name=apyrase 2. apyrase 2. Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination.","AT5G66460","MAN7",372.21,0.66224,0.19797,3.3452,{"v":0.000822,"d":"8.22E-04"},0.0049902,"full_name=endo-beta-mannase 7. Glycosyl hydrolase superfamily protein. Encodes a endo-beta-mannanase involved in seed germination."]
["AT2G20670",null,60.537,-2.054,0.50772,-4.0456,{"v":5.22e-05,"d":"5.22E-05"},{"v":0.000324,"d":"3.24E-04"},"sugar phosphate exchanger, putative (DUF506).","AT5G47900",null,97.842,1.0846,0.31081,3.4896,{"v":4.84E-4,"d":"4.84E-04"},2.9933E-3,"heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624).","AT4G21210","RP1",273.36,-0.71124,0.21274,-3.3432,{"v":0.000828,"d":"8.28E-04"},0.0050213,"full_name=PPDK regulatory protein. PPDK regulatory protein. Encodes a PPDK regulatory protein that has both protein kinase and protein phosphatase activities towards PPDK (pyruvate orthophosphate dikinase)."]
["AT2G05300",null,114.75,-1.2018,0.29709,-4.0453,{"v":5.23e-05,"d":"5.23E-05"},{"v":0.000324,"d":"3.24E-04"},"pseudogene. pseudogene of the F-box protein family","AT1G70440","SRO3",8.5401,-6.1114,1.7519,-3.4885,{"v":4.86E-4,"d":"4.86E-04"},0.0030037,"full_name=similar to RCD one 3. similar to RCD one 3. Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.","AT4G16970",null,35.023,-1.8343,0.54883,-3.3422,{"v":0.000831,"d":"8.31E-04"},0.0050362,"Protein kinase superfamily protein."]
["AT2G01570","RGA1",778.99,0.60156,0.14889,4.0402,{"v":5.34e-05,"d":"5.34E-05"},{"v":0.000331,"d":"3.31E-04"},"full_name=REPRESSOR OF GA1-3 1. GRAS family transcription factor family protein. Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.","AT4G01700",null,24.229,2.2177,0.63626,3.4856,{"v":0.000491,"d":"4.91E-04"},0.0030307,"Chitinase family protein.","AT3G15780",null,80.002,1.2037,0.36052,3.3388,{"v":0.000841,"d":"8.41E-04"},0.0050883,"transmembrane protein."]
["AT4G10840","KLCR1",840.67,-0.50347,0.12466,-4.0386,{"v":5.38E-5,"d":"5.38E-05"},{"v":0.000333,"d":"3.33E-04"},"full_name=kinesin light chain-related 1. Tetratricopeptide repeat (TPR)-like superfamily protein.","AT1G63690","SPPL2",614.7,0.50648,0.1454,3.4834,{"v":4.95E-4,"d":"4.95E-04"},0.0030524,"full_name=SIGNAL PEPTIDE PEPTIDASE-LIKE 2. SIGNAL PEPTIDE PEPTIDASE-LIKE 2.","AT3G54440",null,897.03,0.51375,0.15394,3.3373,{"v":0.000846,"d":"8.46E-04"},5.1116E-3,"glycoside hydrolase family 2 protein."]
["AT2G46660","CYP78A6",144.05,1.122,0.27817,4.0334,{"v":5.5e-05,"d":"5.50E-05"},{"v":0.00034,"d":"3.40E-04"},"full_name=cytochrome P450, family 78, subfamily A, polypeptide 6. cytochrome P450, family 78, subfamily A, polypeptide 6. Encodes a member of CYP78A cytochrome P450 monooxygenase protein family that is required in the sporophytic tissue of the mother plant to promote seed growth.","AT5G10100","TPPI",113.6,1.0226,0.29393,3.4791,{"v":0.000503,"d":"5.03E-04"},0.0030974,"full_name=trehalose-6-phosphate phosphatase I. Haloacid dehalogenase-like hydrolase (HAD) superfamily protein.","AT5G25630",null,861.1,0.53268,0.15975,3.3345,{"v":0.000855,"d":"8.55E-04"},0.0051545,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT4G10030","ABHD11",152.74,-1.1369,0.28193,-4.0325,{"v":5.52E-5,"d":"5.52E-05"},{"v":0.000341,"d":"3.41E-04"},"alpha/beta-Hydrolases superfamily protein.","AT2G21590","APL4",460.39,-0.57634,0.16566,-3.479,{"v":0.000503,"d":"5.03E-04"},0.0030981,"Glucose-1-phosphate adenylyltransferase family protein. Encodes the large subunit of ADP-glucose pyrophosphorylase, the enzyme which catalyzes the first and limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms of the large subunit (ApL1-4) have been described.","AT3G23830","GRP4",526.64,-0.58943,0.17677,-3.3345,{"v":0.000855,"d":"8.55E-04"},0.0051545,"full_name=glycine-rich RNA-binding protein 4. glycine-rich RNA-binding protein 4. encodes a glycine-rich RNA binding protein. Gene expression is induced by cold and reduced by ionic (salt) and non-ionic (mannitol) osmotic stress. Lines overexpressing the gene are slightly more tolerant to osmotic stress during germination."]
["AT3G06570",null,125.02,-1.2632,0.31342,-4.0304,{"v":5.57e-05,"d":"5.57E-05"},{"v":0.000344,"d":"3.44E-04"},"Galactose oxidase/kelch repeat superfamily protein.","AT3G15650",null,72.304,-1.3497,0.38839,-3.4751,{"v":0.000511,"d":"5.11E-04"},3.1389E-3,"alpha/beta-Hydrolases superfamily protein.","AT5G08580",null,234.3,-0.79423,0.23842,-3.3312,{"v":0.000865,"d":"8.65E-04"},5.2093E-3,"Calcium-binding EF hand family protein."]
["AT2G25830",null,355.29,0.72136,0.17913,4.0271,{"v":5.65e-05,"d":"5.65E-05"},{"v":3.48E-4,"d":"3.48E-04"},"YebC-like protein.","AT4G09970",null,89.944,1.1424,0.32911,3.4711,{"v":0.000518,"d":"5.18E-04"},0.0031812,"transmembrane protein.","AT5G21326","CIPK26",240.6,0.73428,0.22055,3.3293,{"v":0.000871,"d":"8.71E-04"},0.0052339,"full_name=calcineurin B-like protein (CBL)-interacting protein kinase 26. Ca2+regulated serine-threonine protein kinase family protein."]
["AT4G13460","SUVH9",536.01,-0.61982,0.15399,-4.025,{"v":5.7e-05,"d":"5.70E-05"},{"v":0.000351,"d":"3.51E-04"},"full_name=SU(VAR)3-9 homolog 9. SU(VAR)3-9 homolog 9. Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.","AT1G13980","GN",474.27,0.55499,0.15998,3.4692,{"v":5.22E-4,"d":"5.22E-04"},0.0032007,"full_name=GNOM. sec7 domain-containing protein. Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions.","AT5G01890","PXC2",160.62,-0.86992,0.26132,-3.3289,{"v":0.000872,"d":"8.72E-04"},0.0052389,"Leucine-rich receptor-like protein kinase family protein."]
["AT2G20370","MUR3",348.11,-0.69915,0.17384,-4.0219,{"v":5.77E-5,"d":"5.77E-05"},{"v":0.000355,"d":"3.55E-04"},"full_name=MURUS 3. Exostosin family protein. Encodes a xyloglucan galactosyltransferase located in the membrane of Golgi stacks that is involved in the biosynthesis of fucose. It is also involved in endomembrane organization. It is suggested that it is a dual-function protein that is responsible for actin organization and the synthesis of cell wall materials.","AT1G09810","ECT11",175.78,-0.86138,0.2484,-3.4678,{"v":0.000525,"d":"5.25E-04"},3.2155E-3,"full_name=evolutionarily conserved C-terminal region 11. evolutionarily conserved C-terminal region 11.","AT4G01100","ADNT1",2412.5,0.45456,0.13656,3.3286,{"v":0.000873,"d":"8.73E-04"},0.0052419,"full_name=adenine nucleotide transporter 1. adenine nucleotide transporter 1."]
["AT1G11175",null,203.22,-0.93323,0.23234,-4.0167,{"v":5.9e-05,"d":"5.90E-05"},{"v":0.000362,"d":"3.62E-04"},"other_RNA.","AT3G48820","SIA2",192.88,0.77982,0.22508,3.4647,{"v":5.31E-4,"d":"5.31E-04"},0.0032465,"Glycosyltransferase family 29 (sialyltransferase) family protein. Encodes a homolog of the animal sialyltransferases but sialyltransferase activity was not detected (Plant Biology 2009, 11:284). Located in the Golgi apparatus.","AT5G22510","INV-E",619.86,0.55349,0.16646,3.325,{"v":0.000884,"d":"8.84E-04"},0.0052997,"full_name=alkaline/neutral invertase E. alkaline/neutral invertase. Encodes a chloroplast-targeted alkaline/neutral invertase that is implicated in the development of the photosynthetic apparatus and nitrogen assimilation in seedlings to control the sucrose to hexose ratio."]
["AT3G06640",null,99.85,1.3358,0.33275,4.0143,{"v":5.96e-05,"d":"5.96E-05"},{"v":0.000366,"d":"3.66E-04"},"PAS domain-containing protein tyrosine kinase family protein.","AT3G54180","CDKB1;1",51.807,1.4836,0.42853,3.4621,{"v":0.000536,"d":"5.36E-04"},0.0032745,"full_name=cyclin-dependent kinase B1;1. cyclin-dependent kinase B1;1. Arabidopsis homolog of yeast cdc2, a protein kinase (cyclin-dependent kinase) that plays a central role in control of the mitotic cell cycle.","AT3G63120","CYCP1;1",129.11,-0.99665,0.2999,-3.3233,{"v":0.00089,"d":"8.90E-04"},0.0053272,"full_name=cyclin p1;1. cyclin p1;1."]
["AT4G02230",null,4174.7,0.32884,0.081999,4.0103,{"v":6.06e-05,"d":"6.06E-05"},{"v":0.000371,"d":"3.71E-04"},"Ribosomal protein L19e family protein.","AT4G29060","emb2726",4823,0.43159,0.12481,3.458,{"v":5.44E-4,"d":"5.44E-04"},0.0033198,"full_name=embryo defective 2726. elongation factor Ts family protein.","AT1G67810","SUFE2",312.35,-0.67807,0.20412,-3.3218,{"v":0.000894,"d":"8.94E-04"},0.0053475,"full_name=sulfur E2. sulfur E2. Encodes a protein capable of stimulating the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. SufE2:GFP localizes to the chloroplasts where it is likely to play a role in iron-sulfur cluster assembly. Transcript levels for this gene are high in the pollen relative to other organs based on RT-PCR analysis."]
["AT5G58700","PLC4",179.6,0.9719,0.24245,4.0087,{"v":6.11e-05,"d":"6.11E-05"},{"v":0.000374,"d":"3.74E-04"},"full_name=phosphatidylinositol-speciwc phospholipase C4. phosphatidylinositol-speciwc phospholipase C4.","AT4G25030","ATNHR2B",303.74,0.67547,0.19541,3.4567,{"v":0.000547,"d":"5.47E-04"},3.3352E-3,"Serine/Threonine-kinase.","AT5G13030","SELO",743.24,0.52174,0.15709,3.3214,{"v":0.000896,"d":"8.96E-04"},0.0053549,"selenoprotein O."]
["AT4G23940","FtsHi1",875.39,0.54742,0.1366,4.0074,{"v":6.14e-05,"d":"6.14E-05"},{"v":0.000375,"d":"3.75E-04"},"full_name=FTSH inactive protease 1. FtsH extracellular protease family. Encodes FtsHi1. Localizes to the chloroplast envelope membrane. Functions in chloroplast biogenesis and division.","AT1G55850","CSLE1",911.11,-0.49822,0.14418,-3.4556,{"v":0.000549,"d":"5.49E-04"},0.0033447,"full_name=cellulose synthase like E1. cellulose synthase like E1. encodes a protein similar to cellulose synthase","AT4G19640","ARA7",390.64,0.64984,0.19576,3.3196,{"v":9.01E-4,"d":"9.01E-04"},0.00538,"Ras-related small GTP-binding family protein. Encodes Ara7."]
["AT3G51510",null,830.21,-0.49814,0.12436,-4.0058,{"v":6.18e-05,"d":"6.18E-05"},{"v":0.000378,"d":"3.78E-04"},"transmembrane protein.","AT1G17130","CWC16B",517.87,-0.57345,0.16602,-3.4542,{"v":0.000552,"d":"5.52E-04"},0.0033576,"coiled-coil protein (DUF572).","AT3G55460","SCL30",703.23,0.53723,0.16193,3.3176,{"v":0.000908,"d":"9.08E-04"},0.005413,"full_name=SC35-like splicing factor 30. SC35-like splicing factor 30. encodes an SC35-like splicing factor that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926."]
["AT1G49390",null,94.178,-1.3108,0.32749,-4.0026,{"v":6.27e-05,"d":"6.27E-05"},{"v":0.000382,"d":"3.82E-04"},"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT4G16340","SPK1",482.92,0.54082,0.15672,3.4509,{"v":0.000559,"d":"5.59E-04"},0.0033935,"full_name=SPIKE1. guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein. Encodes SPIKE1 (SPK1), the lone DOCK family guanine nucleotide exchange factor (GEF) in Arabidopsis. SPK1 is a peripheral membrane protein that accumulates at, and promotes the formation of, a specialized domain of the endoplasmic reticulum (ER) termed the ER exit site (ERES). SPK1 promotes polarized growth and cell-cell adhesion in the leaf epidermis. Mutant has seedling lethal; cotyledon, leaf-shape, trichome defects.","AT3G26900","SKL1",453.37,0.60941,0.18389,3.3141,{"v":0.00092,"d":"9.20E-04"},0.0054735,"full_name=shikimate kinase-like 1. shikimate kinase like 1. Encodes a protein with some sequence similarity to shikimate kinases, but a truncated form of this protein (lacking a putative N-terminal chloroplast transit peptide) does not have shikimate kinase activity in vitro. skl1-3 mutants have a variegated phenotype and skl1-8 mutants have an albino phenotype consistent with the observation of chloroplast defects in these mutants."]
["AT1G51500","ABCG12",445.81,-0.67251,0.16803,-4.0022,{"v":6.27e-05,"d":"6.27E-05"},{"v":0.000382,"d":"3.82E-04"},"full_name=ATP-binding cassette G12. ABC-2 type transporter family protein. Encodes an ABC transporter involved in cuticular wax biosynthesis. Lines carrying recessive mutations in this locus have weakly glaucous stem surface, and relative elevated secondary alcohols and ketones.","AT3G18440","ALMT9",291.02,-0.66038,0.19139,-3.4504,{"v":0.00056,"d":"5.60E-04"},0.0033974,"full_name=aluminum-activated malate transporter 9. aluminum-activated malate transporter 9. Belongs to the aluminum-activated malate transporter family. Encodes a vacuolar malate channel. Expressed in all parts of plants. Almost exclusively expressed in mesophyll cells of leaves.","AT4G11600","GPX6",1235.1,0.5978,0.18043,3.3132,{"v":0.000922,"d":"9.22E-04"},0.0054861,"full_name=glutathione peroxidase 6. glutathione peroxidase 6. Encodes glutathione peroxidase."]
["AT4G17040","CLPR4",1767.1,0.43354,0.10837,4.0004,{"v":6.32e-05,"d":"6.32E-05"},{"v":0.000385,"d":"3.85E-04"},"full_name=CLP protease R subunit 4. CLP protease R subunit 4. HON5 (At4g17040) encodes the ClpR4 subunit of the chloroplast-localized Clp protease complex. hon mutations disturb plastid protein homeostasis, thereby activating plastid signaling and inducing stress acclimatization.","AT5G42280",null,60.068,1.4111,0.40901,3.4501,{"v":0.00056,"d":"5.60E-04"},0.0033976,"Cysteine/Histidine-rich C1 domain family protein.","AT3G45210",null,21.738,2.4739,0.74694,3.3121,{"v":0.000926,"d":"9.26E-04"},0.005503,"transcription initiation factor TFIID subunit (Protein of unknown function, DUF584)."]
["AT5G10860","CBSX3",4426.3,0.35806,0.089618,3.9954,{"v":6.46e-05,"d":"6.46E-05"},{"v":0.000393,"d":"3.93E-04"},"full_name=CBS domain containing protein 3. Cystathionine beta-synthase (CBS) family protein. Encodes a single cystathionine beta-Synthase domain-containing protein. Modulates development by regulating the thioredoxin system.","AT5G22580",null,99.019,-1.1685,0.33892,-3.4479,{"v":0.000565,"d":"5.65E-04"},3.421E-3,"Stress responsive A/B Barrel Domain-containing protein.","AT5G10695",null,44.043,1.6752,0.50614,3.3097,{"v":0.000934,"d":"9.34E-04"},0.0055411,"methionyl-tRNA synthetase."]
["AT3G48360","BT2",11.804,-7.0557,1.7684,-3.9899,{"v":6.61e-05,"d":"6.61E-05"},{"v":0.000401,"d":"4.01E-04"},"full_name=BTB and TAZ domain protein 2. BTB and TAZ domain protein 2. encodes a protein (BT2) that is an essential component of the TAC1-mediated telomerase activation pathway. Acts redundantly with BT3 and BT1 during female gametophyte development and with BT3 during male gametophyte development. BT2 also mediates multiple responses to nutrients, stresses, and hormones.","AT4G02500","XT2",1109.8,0.4837,0.14039,3.4453,{"v":0.00057,"d":"5.70E-04"},3.4489E-3,"full_name=UDP-xylosyltransferase 2. UDP-xylosyltransferase 2. Encodes a protein with xylosyltransferase activity, which is specific for UDP-xylose as donor substrate and for oligosaccharides with a degree of polymerization >4. Although the enzyme utilizes either cellopentaose or cellohexaose, its activity is four-fold higher with cellohexaose as an acceptor compared to cellopentaose. The enzyme is able to add several xylosyl residues to the acceptor forming mono-, di- and trixylosylated polysaccharides.","AT1G05205",null,145.47,-1.0104,0.30542,-3.3083,{"v":0.000939,"d":"9.39E-04"},0.005562,"hexokinase-1 protein."]
["AT4G37240",null,34.292,-2.1779,0.54601,-3.9888,{"v":6.64e-05,"d":"6.64E-05"},{"v":0.000403,"d":"4.03E-04"},"HTH-type transcriptional regulator.","AT2G15280","RTNLB10",91.332,1.1723,0.34029,3.445,{"v":5.71E-4,"d":"5.71E-04"},0.0034518,"Reticulon family protein.","AT1G53090","SPA4",76.037,1.343,0.40601,3.3077,{"v":9.41E-4,"d":"9.41E-04"},0.0055716,"full_name=SPA1-related 4. SPA1-related 4. Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA4 (and SPA3) predominantly regulates elongation growth in adult plants."]
["AT4G32285","CAP1",1231.6,-0.45107,0.11313,-3.9873,{"v":6.68e-05,"d":"6.68E-05"},{"v":0.000405,"d":"4.05E-04"},"ENTH/ANTH/VHS superfamily protein.","AT5G17780",null,175.19,-1.0083,0.29293,-3.4421,{"v":0.000577,"d":"5.77E-04"},0.003485,"alpha/beta-Hydrolases superfamily protein.","AT3G46510","PUB13",446.68,0.61243,0.18524,3.3061,{"v":0.000946,"d":"9.46E-04"},0.0055967,"full_name=plant U-box 13. plant U-box 13. Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29. Involved in ubiquitination of pattern recognition receptor FLS2."]
["AT1G05460","SDE3",465.54,-0.64412,0.1618,-3.9808,{"v":6.87e-05,"d":"6.87E-05"},{"v":0.000416,"d":"4.16E-04"},"full_name=SILENCING DEFECTIVE. P-loop containing nucleoside triphosphate hydrolases superfamily protein. Encodes a protein with similarity to RNA helicases. Mutants are defective in post-transcriptional gene silencing.","AT2G28520","VHA-A1",370.19,0.59592,0.17331,3.4385,{"v":0.000585,"d":"5.85E-04"},0.0035269,"full_name=vacuolar proton ATPase A1. vacuolar proton ATPase A1. Vacuolar proton ATPase subunit VHA-a isoform 1. Localized in the trans-Golgi network.","AT4G19840","PP2-A1",334.96,0.69698,0.21084,3.3057,{"v":0.000947,"d":"9.47E-04"},0.0055974,"full_name=phloem protein 2-A1. phloem protein 2-A1. encodes a phloem lectin, similar to phloem lectin in cucumber and celery. Gene is expressed in the phloem, predominantly in the companion cells."]
["AT4G16830","ATRGGA",1678.6,0.40814,0.10264,3.9766,{"v":6.99e-05,"d":"6.99E-05"},{"v":0.000422,"d":"4.22E-04"},"Hyaluronan / mRNA binding family.","AT4G24040","TRE1",40.074,-1.8182,0.52932,-3.435,{"v":0.000593,"d":"5.93E-04"},3.5672E-3,"full_name=trehalase 1. trehalase 1. Encodes a trehalase, member of Glycoside Hydrolase Family 37.","AT1G24310","NUP54",207.61,-0.78656,0.23836,-3.2999,{"v":0.000967,"d":"9.67E-04"},0.0057062,"nuclear pore complex protein."]
["AT4G29160","SNF7.1",1008.5,-0.49209,0.12378,-3.9756,{"v":7.02e-05,"d":"7.02E-05"},{"v":0.000424,"d":"4.24E-04"},"SNF7 family protein.","AT4G26530","FBA5",15.119,3.0195,0.87944,3.4334,{"v":0.000596,"d":"5.96E-04"},0.0035858,"full_name=fructose-bisphosphate aldolase 5. Aldolase superfamily protein.","AT5G59400",null,31.662,1.8997,0.5759,3.2986,{"v":0.000972,"d":"9.72E-04"},0.0057268,"PGR5-like A protein."]
["AT2G41530","SFGH",1506.2,-0.4454,0.11209,-3.9735,{"v":7.08E-5,"d":"7.08E-05"},{"v":0.000427,"d":"4.27E-04"},"full_name=S-formylglutathione hydrolase. S-formylglutathione hydrolase. Encodes a protein with S-formylglutathione hydrolase activity.","AT5G14500",null,167.66,-0.8745,0.25499,-3.4296,{"v":0.000605,"d":"6.05E-04"},0.0036322,"aldose 1-epimerase family protein.","AT5G49830","EXO84B",364.88,0.62807,0.19043,3.2981,{"v":0.000973,"d":"9.73E-04"},0.0057318,"full_name=exocyst complex component 84B. exocyst complex component 84B. Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion."]
["AT1G01220","FKGP",295.96,0.76906,0.19362,3.9721,{"v":7.12e-05,"d":"7.12E-05"},{"v":0.000429,"d":"4.29E-04"},"full_name=L-fucokinase/GDP-L-fucose pyrophosphorylase. L-fucokinase/GDP-L-fucose pyrophosphorylase. Encodes a bifunctional enzyme that has both L-fucokinase and GDP-L-fucose pyrophosphorylase activities. It catalyzes the two steps of the L-fucose salvage pathway for the generation of activated GDP-L-fucose. This pathway seems to be of minor importance for cell wall polysaccharide biosynthesis compared to the de novo GDP-L-fucose biosynthesis pathway in Arabidopsis.","AT4G02540",null,350.87,0.67669,0.19736,3.4287,{"v":0.000607,"d":"6.07E-04"},0.0036406,"Cysteine/Histidine-rich C1 domain family protein.","AT4G15248","BBX30",11.21,5.423,1.6459,3.2948,{"v":0.000985,"d":"9.85E-04"},0.0057936,"full_name=B-box domain protein 30. B-box type zinc finger family protein."]
["AT1G74850","PTAC2",733.98,0.52043,0.13109,3.9701,{"v":7.18e-05,"d":"7.18E-05"},{"v":0.000433,"d":"4.33E-04"},"full_name=plastid transcriptionally active 2. plastid transcriptionally active 2. Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression.","AT2G04378",null,650.2,0.5106,0.14901,3.4265,{"v":6.11E-4,"d":"6.11E-04"},0.0036673,"Beta-galactosidase related protein.","AT5G54470","BBX29",14.696,3.505,1.0641,3.2937,{"v":0.000989,"d":"9.89E-04"},0.005812,"full_name=B-box domain protein 29. B-box type zinc finger family protein."]
["AT2G19490","RECA2",192.81,0.93166,0.23484,3.9673,{"v":7.27e-05,"d":"7.27E-05"},{"v":4.37E-4,"d":"4.37E-04"},"full_name=A. thaliana recA homolog 2. recA DNA recombination family protein.","AT4G33110",null,590.33,0.50537,0.14771,3.4214,{"v":0.000623,"d":"6.23E-04"},0.0037333,"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT2G42400","VOZ2",229.97,0.78504,0.23848,3.2919,{"v":0.000995,"d":"9.95E-04"},0.0058446,"full_name=vascular plant one zinc finger protein 2. vascular plant one zinc finger protein 2."]
["AT1G07270","CDC6B",10.958,6.8559,1.7292,3.9648,{"v":7.35e-05,"d":"7.35E-05"},{"v":0.000441,"d":"4.41E-04"},"Cell division control, Cdc6.","AT2G36695",null,8.1512,-6.0417,1.7668,-3.4196,{"v":0.000627,"d":"6.27E-04"},0.0037531,"hypothetical protein.","AT5G20650","COPT5",235.88,-0.83303,0.25323,-3.2897,1.0031E-3,0.0058838,"full_name=copper transporter 5. copper transporter 5. Encodes COPT5, a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast. Plays an important role in the plant response to environmental copper scarcity, probably by remobilizing copper from prevacuolar vesicles, which could act as internal stores or recycling vesicles to provide the metal cofactor to key copper-dependent processes such as photosynthesis."]
["AT1G05790",null,559.63,-0.58542,0.14775,-3.9623,{"v":7.42e-05,"d":"7.42E-05"},{"v":0.000445,"d":"4.45E-04"},"lipase class 3 family protein.","AT4G13430","IIL1",1960.8,-0.41024,0.12009,-3.4161,{"v":0.000635,"d":"6.35E-04"},3.7954E-3,"full_name=isopropyl malate isomerase large subunit 1. isopropyl malate isomerase large subunit 1. Encodes a methylthioalkylmalate isomerase involved in glucosinolate biosynthesis.","AT1G31730","AP4E",824.09,0.50799,0.15452,3.2875,0.0010108,0.0059192,"Adaptin family protein."]
["AT4G25880","PUM6",654.76,0.5438,0.13732,3.96,{"v":7.5e-05,"d":"7.50E-05"},{"v":0.000449,"d":"4.49E-04"},"full_name=pumilio 6. pumilio 6. Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.","AT3G51240","F3H",1902.4,-0.71429,0.20919,-3.4145,{"v":0.000639,"d":"6.39E-04"},3.8146E-3,"full_name=flavanone 3-hydroxylase. flavanone 3-hydroxylase. Encodes flavanone 3-hydroxylase that is coordinately expressed with chalcone synthase and chalcone isomerases. Regulates flavonoid biosynthesis. Not responsive to auxin or ethylene stimulus (qRT-PCR).","AT1G15940","PDS5E",463.52,0.61652,0.18762,3.286,0.0010163,0.0059464,"Tudor/PWWP/MBT superfamily protein."]
["AT3G07680","p24beta2",964.72,-0.52507,0.13261,-3.9594,{"v":7.52e-05,"d":"7.52E-05"},{"v":0.00045,"d":"4.50E-04"},"full_name=p24 subfamily beta 2. emp24/gp25L/p24 family/GOLD family protein. Encodes an Golgi-localized p24 protein. Interacts with p24delta5 at ER export sites for ER exit and coupled transport to the Golgi apparatus.","AT3G19480","3-PGDH",25.979,2.2904,0.67107,3.413,{"v":0.000643,"d":"6.43E-04"},3.8333E-3,"D-3-phosphoglycerate dehydrogenase.","AT2G34357",null,459.31,-0.58703,0.17867,-3.2856,0.0010177,0.0059506,"ARM repeat superfamily protein."]
["AT5G20810","SAUR70",75.069,-1.4521,0.36762,-3.9502,{"v":7.81e-05,"d":"7.81E-05"},{"v":0.000467,"d":"4.67E-04"},"SAUR-like auxin-responsive protein family.","AT2G21130",null,551.29,-0.66869,0.19622,-3.4078,{"v":0.000655,"d":"6.55E-04"},0.0038992,"Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein.","AT3G09210","PTAC13",440.81,-0.66479,0.20249,-3.283,1.0271E-3,0.0059928,"full_name=plastid transcriptionally active 13. plastid transcriptionally active 13."]
["AT3G20130","CYP705A22",102.69,1.2826,0.32504,3.946,{"v":7.95e-05,"d":"7.95E-05"},{"v":4.75E-4,"d":"4.75E-04"},"full_name=cytochrome P450, family 705, subfamily A, polypeptide 22. cytochrome P450, family 705, subfamily A, polypeptide 22. Encodes a member of the CYP705A family of cytochrome P450 enzymes. Mutants show altered gravitropic responses.","AT1G69520",null,31.96,1.8074,0.53066,3.4059,{"v":0.000659,"d":"6.59E-04"},0.0039234,"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT5G04510","PDK1",329.65,-0.68589,0.20908,-3.2806,1.036E-3,0.0060403,"full_name=3'-phosphoinositide-dependent protein kinase 1. 3'-phosphoinositide-dependent protein kinase 1. Encodes 3-phosphoinositide-dependent protein kinase that contains pleckstrin homology domain and binds 3-phosphoinositides. It activates the protein kinase AGC2-1 in a phosphatidic acid dependent manner. Phosphorylates S6K1. Interacts with PID, and transphosphorylation by PDK1 increases PID autophosphorylation."]
["AT1G76620","PDE339",159.96,-1.017,0.25776,-3.9456,{"v":7.96e-05,"d":"7.96E-05"},{"v":4.75E-4,"d":"4.75E-04"},"Serine/Threonine-kinase, putative (Protein of unknown function, DUF547).","AT4G17170","RABB1C",391.35,-0.57307,0.1684,-3.4031,{"v":0.000666,"d":"6.66E-04"},0.0039617,"full_name=RAB GTPase homolog B1C. RAB GTPase homolog B1C. member of RAB gene family","AT1G77030","RH29",436.75,-0.71601,0.21832,-3.2797,0.0010392,0.0060553,"putative DEAD-box ATP-dependent RNA helicase 29."]
["AT1G01520","ASG4",17.599,3.665,0.9301,3.9404,{"v":8.13e-05,"d":"8.13E-05"},{"v":0.000485,"d":"4.85E-04"},"full_name=ALTERED SEED GERMINATION 4. Homeodomain-like superfamily protein.","AT4G34230","CAD5",142.77,-0.92962,0.27347,-3.3993,{"v":0.000676,"d":"6.76E-04"},0.0040131,"full_name=cinnamyl alcohol dehydrogenase 5. cinnamyl alcohol dehydrogenase 5. Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use sinapyl, caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates.","AT1G80630",null,176.39,0.83724,0.25543,3.2777,0.0010464,6.0916E-3,"RNI-like superfamily protein."]
["AT1G72230",null,99.213,-1.7305,0.43931,-3.9392,{"v":8.17e-05,"d":"8.17E-05"},{"v":0.000487,"d":"4.87E-04"},"Cupredoxin superfamily protein.","AT3G20910","NF-YA9",199.7,-0.77575,0.22826,-3.3985,{"v":6.78E-4,"d":"6.78E-04"},0.0040196,"full_name=nuclear factor Y, subunit A9. nuclear factor Y, subunit A9.","AT2G37570","SLT1",116.61,-0.97675,0.29817,-3.2758,1.0535E-3,0.0061252,"full_name=sodium- and lithium-tolerant 1. HSP20-like chaperones superfamily protein. encodes a protein that can complement the salt-sensitive phenotype of a calcineurin (CaN)-deficient yeast mutant. This gene occurs in a single-copy and is 75% identical to tobacco SLT1 gene."]
["AT1G16840",null,506.34,-0.65989,0.16781,-3.9325,{"v":8.41e-05,"d":"8.41E-05"},{"v":0.0005,"d":"5.00E-04"},"hypothetical protein.","AT1G55130","TMN6",211.63,0.88276,0.2601,3.3939,{"v":0.000689,"d":"6.89E-04"},0.0040815,"full_name=transmembrane nine 6. Endomembrane protein 70 protein family. Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.","AT1G01350",null,266.36,0.70809,0.21639,3.2722,0.0010671,0.0061943,"Zinc finger (CCCH-type/C3HC4-type RING finger) family protein."]
["AT2G46280","TRIP-1",3000.8,0.50008,0.12725,3.9298,{"v":8.5e-05,"d":"8.50E-05"},{"v":0.000505,"d":"5.05E-04"},"full_name=TGF-beta receptor interacting protein 1. TGF-beta receptor interacting protein 1. Encodes a homolog of mammalian TGF-beta receptor interacting protein. Co-immunoprecipitates with BRI1 and can be phosphorylated in vitro by BRI1 at specific sites (Thr-14, Thr-89, and either Thr-197 or Ser-198). May therefore be a cytoplasmic BRI1 substrate and involved in brassinosteroid regulated plant growth and development.The encoded protein has two DWD motifs. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase","AT3G20260",null,281.89,0.73418,0.2164,3.3927,{"v":0.000692,"d":"6.92E-04"},0.0040953,"DUF1666 family protein (DUF1666).","AT5G44780","MORF4",53.539,-1.5102,0.46175,-3.2706,0.0010732,0.0062236,"full_name=multiple organellar RNA editing factor 4. high molecular weight subunit-like glutenin."]
["AT1G29470",null,1983.1,-0.3738,0.095173,-3.9275,{"v":8.58e-05,"d":"8.58E-05"},{"v":0.000509,"d":"5.09E-04"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT5G49870",null,5.9327,6.4502,1.9019,3.3914,{"v":0.000695,"d":"6.95E-04"},0.0041124,"Mannose-binding lectin superfamily protein.","AT1G68720","TADA",350.07,-0.64071,0.19591,-3.2704,0.001074,0.0062244,"full_name=tRNA arginine adenosine deaminase. tRNA arginine adenosine deaminase. Encodes the chloroplastic A-to-I tRNA editing enzyme."]
["AT1G31040","ORE15",64.702,1.8387,0.46846,3.9251,{"v":8.67e-05,"d":"8.67E-05"},{"v":0.000514,"d":"5.14E-04"},"PLATZ transcription factor family protein.","AT3G18280","TED4",318.66,-0.64733,0.19106,-3.388,{"v":0.000704,"d":"7.04E-04"},0.0041552,"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein.","AT3G17430",null,186.66,-0.90935,0.27842,-3.2661,1.0903E-3,0.0063073,"Nucleotide-sugar transporter family protein. Nucleotide/sugar transporter family protein"]
["AT1G70000","MYBD",177.33,0.95857,0.24437,3.9227,{"v":8.76e-05,"d":"8.76E-05"},{"v":0.000518,"d":"5.18E-04"},"myb-like transcription factor family protein.","AT4G13560","UNE15",110.28,1.1246,0.33208,3.3864,{"v":0.000708,"d":"7.08E-04"},0.0041764,"full_name=unfertilized embryo sac 15. Late embryogenesis abundant protein (LEA) family protein.","AT3G18760",null,163.16,-0.98525,0.30187,-3.2638,0.0010993,0.0063531,"Translation elongation factor EF1B/ribosomal protein S6 family protein."]
["AT1G53780",null,1604.2,0.40933,0.10449,3.9175,{"v":8.95e-05,"d":"8.95E-05"},{"v":0.000529,"d":"5.29E-04"},"26S proteasome regulatory complex ATPase.","AT1G15020","QSOX1",252.82,0.66981,0.19789,3.3849,{"v":0.000712,"d":"7.12E-04"},0.0041943,"full_name=quiescin-sulfhydryl oxidase 1. quiescin-sulfhydryl oxidase 1. Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the quiescin-sulfhydryl oxidase (QSOX) family, which possess an Erv1-like domain at the COOH terminus in addition to a TRX domain.","AT2G39140","SVR1",351.73,-0.64743,0.19852,-3.2613,1.1091E-3,0.0064016,"full_name=SUPPRESSOR OF VARIEGATION 1. pseudouridine synthase family protein. Suppressor of var2 variegation phenotype. Chloroplast localized. Loss of function mutant has defects in chloroplast protein translation and rRNA processing. Similar in sequence to pseudouridine synthase proteins."]
["AT5G60170",null,1245.3,-0.43627,0.11138,-3.9169,{"v":8.97e-05,"d":"8.97E-05"},{"v":0.00053,"d":"5.30E-04"},"RNA binding (RRM/RBD/RNP motifs) family protein.","AT1G71840",null,720.74,-0.48731,0.14398,-3.3846,{"v":0.000713,"d":"7.13E-04"},0.0041974,"transducin family protein / WD-40 repeat family protein.","AT2G20710",null,43.112,-1.6269,0.49889,-3.2611,0.00111,0.0064049,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT2G35330","PIR1",670.42,-0.54236,0.13852,-3.9154,{"v":9.02e-05,"d":"9.02E-05"},{"v":0.000533,"d":"5.33E-04"},"RING/U-box superfamily protein.","AT5G42290",null,61.259,-1.8094,0.53526,-3.3805,{"v":0.000723,"d":"7.23E-04"},0.0042544,"transcription activator-like protein.","AT1G66520","pde194",63.366,-1.4159,0.43467,-3.2575,1.124E-3,0.0064768,"full_name=pigment defective 194. formyltransferase."]
["AT5G46760","MYC3",697.77,-0.5576,0.1425,-3.9129,{"v":9.12e-05,"d":"9.12E-05"},{"v":0.000538,"d":"5.38E-04"},"Basic helix-loop-helix (bHLH) DNA-binding family protein. MYC3 is a JAZ-interacting transcription factor that act together with MYC2 and MYC4 to activate JA-responses.","AT1G07400","HSP17.8",27.657,-2.1685,0.64187,-3.3785,{"v":0.000729,"d":"7.29E-04"},0.0042812,"HSP20-like chaperones superfamily protein.","AT2G34810","ATBBE16",37.131,-1.7134,0.52623,-3.2561,0.0011296,0.0065016,"FAD-binding Berberine family protein."]
["AT5G55970",null,252.15,0.85938,0.21981,3.9096,{"v":9.24e-05,"d":"9.24E-05"},{"v":5.44E-4,"d":"5.44E-04"},"RING/U-box superfamily protein.","AT4G18140","SSP4b",48.269,1.6931,0.50166,3.3751,{"v":0.000738,"d":"7.38E-04"},0.0043272,"full_name=SCP1-like small phosphatase 4b. SCP1-like small phosphatase 4b. Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4).","AT3G52230",null,780.2,0.66127,0.2033,3.2527,0.0011433,0.0065703,"hypothetical protein."]
["AT5G08620","STRS2",534.73,0.56433,0.14441,3.9078,{"v":9.31E-5,"d":"9.31E-05"},{"v":0.000548,"d":"5.48E-04"},"full_name=STRESS RESPONSE SUPPRESSOR 2. DEA(D/H)-box RNA helicase family protein. Similar in sequence to DEAD-box RNA helicases. Binds RNA. Involved in drought, salt and cold stress responses.","AT5G45630",null,23.06,-2.3786,0.70531,-3.3725,{"v":7.45E-4,"d":"7.45E-04"},0.0043642,"senescence regulator (Protein of unknown function, DUF584).","AT2G47000","ABCB4",304.89,-0.65736,0.20218,-3.2513,0.0011487,0.0065954,"full_name=ATP-binding cassette B4. ATP binding cassette subfamily B4. Encodes an auxin efflux transmembrane transporter that is a member of the multidrug resistance P-glycoprotein (MDR/PGP) subfamily of ABC transporters. Functions in the basipetal redirection of auxin from the root tip. Exhibits apolar plasma membrane localization in the root cap and polar localization in tissues above and is involved in root hair elongation."]
["AT3G01720","ATSERGT1",564.77,-0.60986,0.15618,-3.9049,{"v":9.43e-05,"d":"9.43E-05"},{"v":0.000554,"d":"5.54E-04"},"peptidyl serine alpha-galactosyltransferase.","AT3G13120","PRPS10",1984,0.49613,0.14712,3.3722,{"v":0.000746,"d":"7.46E-04"},0.0043651,"Ribosomal protein S10p/S20e family protein.","AT2G46810","MYC70",65.327,-1.3014,0.40046,-3.2498,1.1547E-3,6.6257E-3,"basic helix-loop-helix (bHLH) DNA-binding superfamily protein."]
["AT4G11120",null,672.29,0.56957,0.14595,3.9025,{"v":9.52e-05,"d":"9.52E-05"},{"v":0.000559,"d":"5.59E-04"},"translation elongation factor Ts (EF-Ts).","AT5G15750",null,471.02,-0.57814,0.17153,-3.3705,{"v":0.00075,"d":"7.50E-04"},0.0043867,"Alpha-L RNA-binding motif/Ribosomal protein S4 family protein.","AT1G05940","CAT9",327.3,0.66503,0.2047,3.2489,0.0011586,0.006638,"full_name=cationic amino acid transporter 9. cationic amino acid transporter 9. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters."]
["AT3G20050","TCP-1",2581.2,0.38925,0.099801,3.9003,{"v":9.61e-05,"d":"9.61E-05"},{"v":0.000563,"d":"5.63E-04"},"full_name=T-complex protein 1 alpha subunit. T-complex protein 1 alpha subunit. Encodes a putative cytoplasmic chaperonin that is similar to mouse Tcp-1 (t complex polypeptide 1).","AT1G18070","EF-1&#945;",2104.9,-0.34953,0.10378,-3.3679,{"v":0.000757,"d":"7.57E-04"},0.0044215,"Translation elongation factor EF1A/initiation factor IF2gamma family protein.","AT2G28810",null,88.777,-1.1072,0.34104,-3.2464,0.0011686,0.006687,"Dof-type zinc finger DNA-binding family protein."]
["AT1G50380",null,1186.8,-0.43737,0.11216,-3.8996,{"v":9.64e-05,"d":"9.64E-05"},{"v":0.000565,"d":"5.65E-04"},"Prolyl oligopeptidase family protein.","AT1G72930","TIR",10.036,4.6535,1.3818,3.3677,{"v":0.000758,"d":"7.58E-04"},0.0044239,"full_name=toll/interleukin-1 receptor-like. toll/interleukin-1 receptor-like protein. Toll/interleukin-1 receptor-like protein (TIR) mRNA,","AT1G33520","MOS2",604.63,0.73507,0.22644,3.2462,1.1696E-3,0.0066902,"full_name=modifier of snc1, 2. D111/G-patch domain-containing protein. Has single homolog in Arabidopsis, also homologs in human, mouse and C. elegans; contains one G-patch domain (known to mediate RNA-protein interactions) and two KOW domains (may bind RNA and/or protein); localized to the nucleus; mutant suppresses high SA levels and constitutive disease resistance in snc1 npr1 background; required for basal resistance against Pseudomonas syringae maculicola ES4326 and R gene-mediated resistance specified by RPM1, PPS4 and RPP4;"]
["AT3G13540","MYB5",51.849,-1.9415,0.49853,-3.8944,{"v":9.84e-05,"d":"9.84E-05"},{"v":0.000576,"d":"5.76E-04"},"full_name=myb domain protein 5. myb domain protein 5. Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).","AT2G38360","PRA1.B4",144.88,0.8517,0.25302,3.3662,{"v":0.000762,"d":"7.62E-04"},0.004443,"full_name=prenylated RAB acceptor 1.B4. prenylated RAB acceptor 1.B4.","AT5G66070","ATARRE",38.615,1.7581,0.54191,3.2443,1.1776E-3,0.0067278,"RING/U-box superfamily protein."]
["AT5G23850",null,296.04,-0.80122,0.20583,-3.8926,{"v":9.92e-05,"d":"9.92E-05"},{"v":5.8E-4,"d":"5.80E-04"},"O-glucosyltransferase rumi-like protein (DUF821).","AT1G50380",null,664.47,-0.47256,0.1405,-3.3634,{"v":0.00077,"d":"7.70E-04"},0.0044826,"Prolyl oligopeptidase family protein.","AT5G41810",null,80.234,1.2659,0.39051,3.2418,1.1879E-3,0.0067785,"Avr9/Cf-9 rapidly elicited protein."]
["AT2G28110","FRA8",69.289,-1.5022,0.38621,-3.8895,{"v":1E-4,"d":"1.00E-04"},{"v":0.000586,"d":"5.86E-04"},"full_name=FRAGILE FIBER 8. Exostosin family protein. Homolog to AT5G22940, a member of glycosyltransferase family 47 that is involved in secondary cell wall biosynthesis. It exhibits high sequence similarity to tobacco (Nicotiana plumbaginifolia) pectin glucuronyltransferase. Protein has a domain that shares significant similarity with the pfam03016 domain. It is expressed specifically in developing vessels and fiber cells, and FRA8 is targeted to Golgi. Mutants have irregular xylem formation, reduced cellulose levels and plants are smaller than normal siblings.","AT5G53400","BOB1",925.12,-0.44255,0.13161,-3.3625,{"v":0.000772,"d":"7.72E-04"},0.0044897,"full_name=BOBBER1. HSP20-like chaperones superfamily protein. Encodes BOBBER1 (BOB1), a non-canonical small heat shock protein required for both development and thermotolerance. BOB1 is cytoplasmic at basal temperatures but forms heat shock granules containing canonical small heat shock proteins at high temperatures.","AT3G26300","CYP71B34",463.54,0.58108,0.17944,3.2383,0.0012023,0.00685,"full_name=cytochrome P450, family 71, subfamily B, polypeptide 34. cytochrome P450, family 71, subfamily B, polypeptide 34. putative cytochrome P450"]
["AT5G10040",null,38.271,-2.2733,0.58484,-3.8871,{"v":1.01E-4,"d":"1.01E-04"},{"v":0.000591,"d":"5.91E-04"},"transmembrane protein.","AT1G62780",null,1107.7,0.42278,0.12577,3.3615,{"v":0.000775,"d":"7.75E-04"},0.0045031,"dimethylallyl, adenosine tRNA methylthiotransferase.","AT3G53220",null,17.717,-3.1211,0.96452,-3.2359,1.2124E-3,0.0069011,"Thioredoxin superfamily protein."]
["AT1G21350",null,143.21,1.0255,0.2639,3.886,{"v":1.02E-4,"d":"1.02E-04"},{"v":0.000594,"d":"5.94E-04"},"Thioredoxin superfamily protein.","AT1G14518",null,7.7946,-5.9799,1.7806,-3.3584,{"v":0.000784,"d":"7.84E-04"},0.004551,"other_RNA. Unknown gene","AT4G07408",null,21.928,2.2766,0.70382,3.2346,0.001218,6.9286E-3,"hypothetical protein. This gene encodes a small protein and has either evidence of transcription or purifying selection."]
["AT4G26780","AR192",463.2,0.63466,0.16347,3.8825,{"v":1.03E-4,"d":"1.03E-04"},{"v":0.000601,"d":"6.01E-04"},"Co-chaperone GrpE family protein. unknown function","AT1G33240","GTL1",505.56,0.5869,0.17494,3.3549,{"v":7.94E-4,"d":"7.94E-04"},0.0046015,"full_name=GT-2-like 1. GT-2-like 1. Encodes a plant transcriptional activator that contains two separate, but similar, trihelix DNA-binding domains, similar to GT-2. Gene is expressed in all aerial parts of the plant, with higher level of expression in siliques. At-GTL2 was thought to be a duplicated copy of this gene but is likely to be a cloning artefact, the result of a chimeric clone. Regulates ploidy-dependent cell growth in trichome.","AT5G52850",null,27.701,-2.1402,0.66195,-3.2331,0.0012244,0.0069542,"Pentatricopeptide repeat (PPR) superfamily protein."]
["AT4G12800","PSAL",4494.2,-0.44247,0.11401,-3.881,{"v":0.000104,"d":"1.04E-04"},{"v":0.000605,"d":"6.05E-04"},"full_name=photosystem I subunit l. photosystem I subunit l. Encodes subunit L of photosystem I reaction center.","AT4G17560",null,1478.3,0.39267,0.11708,3.3538,{"v":0.000797,"d":"7.97E-04"},0.0046185,"Ribosomal protein L19 family protein.","AT3G60440",null,116.83,-0.9637,0.29814,-3.2323,0.0012279,0.0069721,"Phosphoglycerate mutase family protein."]
["AT5G07360",null,331.51,0.7123,0.18359,3.8799,{"v":1.05E-4,"d":"1.05E-04"},{"v":0.000607,"d":"6.07E-04"},"Amidase family protein.","AT2G23510","SDT",8.5402,-6.1046,1.8207,-3.3529,{"v":0.0008,"d":"8.00E-04"},0.0046296,"full_name=spermidine disinapoyl acyltransferase. spermidine disinapoyl acyltransferase.","AT1G05347",null,17.718,2.7859,0.86233,3.2307,1.2351E-3,0.0070062,"Natural antisense transcript overlaps with AT1G17860. Natural antisense transcript overlaps with AT1G17860"]
["AT5G03650","SBE2.2",1500.6,0.46797,0.1208,3.8738,{"v":1.07E-4,"d":"1.07E-04"},{"v":0.000622,"d":"6.22E-04"},"full_name=starch branching enzyme 2.2. starch branching enzyme 2.2. Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.","AT3G54690","SETH3",213.8,0.74766,0.22311,3.3512,{"v":0.000805,"d":"8.05E-04"},0.0046507,"Sugar isomerase (SIS) family protein.","AT4G18460",null,43.597,-1.5664,0.48519,-3.2284,1.245E-3,0.0070518,"D-Tyr-tRNA(Tyr) deacylase family protein."]
["AT5G56150","UBC30",1683.6,-0.3843,0.099342,-3.8685,{"v":1.1E-4,"d":"1.10E-04"},{"v":0.000635,"d":"6.35E-04"},"full_name=ubiquitin-conjugating enzyme 30. ubiquitin-conjugating enzyme 30.","AT2G44650","CHL-CPN10",871.39,0.48155,0.14378,3.3492,{"v":0.00081,"d":"8.10E-04"},0.0046781,"full_name=chloroplast chaperonin 10. chloroplast chaperonin 10. Encodes a chloroplast-localized chaperonin 10 whose mRNA is expressed in leaves and stems but not roots.","AT1G34640",null,95.307,-1.0641,0.32991,-3.2255,1.2576E-3,0.0071144,"peptidase."]
["AT3G54110","PUMP1",1366.9,0.52192,0.13497,3.867,{"v":1.1E-4,"d":"1.10E-04"},{"v":6.38E-4,"d":"6.38E-04"},"full_name=plant uncoupling mitochondrial protein 1. plant uncoupling mitochondrial protein 1. Member of Uncoupling protein PUMP2 family. Encodes a mitochondrial uncoupling protein AtUCP1 involved in maintain the redox poise of the mitochondrial electron transport chain to facilitate photosynthetic metabolism. Disruption of UCP1 results in a photosynthetic phenotype. Specifically there is a restriction in photorespiration with a decrease in the rate of oxidation of photorespiratory glycine in the mitochondrion. This change leads to an associated reduced photosynthetic carbon assimilation rate.","AT4G33980","COR28",303.3,-0.74189,0.22153,-3.3489,{"v":0.000811,"d":"8.11E-04"},4.6793E-3,"hypothetical protein.","AT3G04520","THA2",201.2,-0.78679,0.2441,-3.2232,1.2676E-3,0.0071644,"full_name=threonine aldolase 2. threonine aldolase 2. Encodes a threonine aldolase, involved in threonine degradation to glycine. Expressed in vascular tissue through out the plant."]
["AT1G54360","TAF6B",607.59,-0.52799,0.13667,-3.8633,{"v":1.12E-4,"d":"1.12E-04"},{"v":0.000647,"d":"6.47E-04"},"full_name=TBP-ASSOCIATED FACTOR 6B. TBP-ASSOCIATED FACTOR 6B. Encodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6.","AT5G02200","FHL",151.74,1.083,0.32354,3.3474,{"v":0.000816,"d":"8.16E-04"},0.0046995,"full_name=far-red-elongated hypocotyl1-like. far-red-elongated hypocotyl1-like protein. Encodes a small plant-specific protein with both nuclear localization and nuclear export signals that is specifically required, together with FHY1, for the light-regulated nuclear accumulation of phyA.","AT5G47590",null,6.2295,6.061,1.8814,3.2216,1.2749E-3,7.1988E-3,"Heat shock protein HSP20/alpha crystallin family."]
["AT4G15630","CASPL1E1",369.23,-0.70522,0.1827,-3.86,{"v":1.13E-4,"d":"1.13E-04"},{"v":0.000655,"d":"6.55E-04"},"Uncharacterized protein family (UPF0497).","AT4G39800","MIPS1",418,-0.96007,0.28713,-3.3437,{"v":0.000827,"d":"8.27E-04"},0.0047553,"full_name=D-myo-Inositol 3-Phosphate Synthase 1. myo-inositol-1-phosphate synthase 1. ** Referred to as MIPS2 in Mitsuhashi et al 2008. myo-inositol-1-phosphate synthase isoform 1.Expressed in leaf, root and silique. Immunolocalization experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.","AT3G03640","BGLU25",3039.7,0.4532,0.14083,3.218,0.0012907,0.0072775,"full_name=beta glucosidase 25. beta glucosidase 25. Encodes beta-glucosidase (GLUC)."]
["AT3G21520","DMP1",43.444,2.0951,0.54284,3.8595,{"v":0.000114,"d":"1.14E-04"},{"v":0.000656,"d":"6.56E-04"},"full_name=DUF679 domain membrane protein 1. transmembrane protein, putative (DUF679 domain membrane protein 1). Encodes a protein is directly or indirectly involved in membrane fission during breakdown of the ER and the tonoplast during leaf senescence and in membrane fusion during vacuole biogenesis in roots.","AT1G26560","BGLU40",113.31,0.96296,0.28812,3.3422,{"v":0.000831,"d":"8.31E-04"},0.004778,"full_name=beta glucosidase 40. beta glucosidase 40.","AT3G16450","JAL33",1423.4,0.46326,0.1441,3.2149,1.305E-3,0.0073509,"full_name=Jacalin-related lectin 33. Mannose-binding lectin superfamily protein."]
["AT3G05560",null,3701.2,0.4181,0.10835,3.8589,{"v":0.000114,"d":"1.14E-04"},{"v":0.000657,"d":"6.57E-04"},"Ribosomal L22e protein family.","AT5G17620","2024-08-07",144.79,0.85082,0.25486,3.3384,{"v":8.43E-4,"d":"8.43E-04"},0.0048404,"full_name=augmin subunit 7. nuclear matrix protein.","AT4G12570","UPL5",238.31,0.71401,0.22218,3.2136,1.3109E-3,0.0073793,"full_name=ubiquitin protein ligase 5. ubiquitin protein ligase 5. Knock-out mutants showed accelerated senescence of leaves."]
["AT2G45840",null,19.403,-3.4062,0.88334,-3.8561,{"v":1.15E-4,"d":"1.15E-04"},{"v":0.000664,"d":"6.64E-04"},"O-glucosyltransferase rumi-like protein (DUF821).","AT5G03610",null,120.06,-0.95451,0.28613,-3.3359,{"v":0.00085,"d":"8.50E-04"},0.0048775,"GDSL-like Lipase/Acylhydrolase superfamily protein.","AT3G60300",null,1339,0.48693,0.15156,3.2129,1.3142E-3,0.0073915,"RWD domain-containing protein."]
["AT1G22570",null,59.785,1.654,0.42926,3.8531,{"v":1.17E-4,"d":"1.17E-04"},{"v":0.000671,"d":"6.71E-04"},"Major facilitator superfamily protein.","AT5G64813","LIP1",315.39,0.61818,0.18544,3.3336,{"v":0.000857,"d":"8.57E-04"},0.0049122,"full_name=Light Insensitive Period1. Ras-related small GTP-binding family protein. The LIP1 gene encodes a small GTPase that influences the light input pathway of the plant circadian network. An MBP:LIP1 fusion protein has GTP hydrolyzing abilities in vitro. In plants, LIP1 seems to play a negative role in regulating circadian period that can be suppressed by light. LIP1 also seems to negatively affect light-pulse-dependent resetting of the clock, especially during the first portion of the subjective evening. LIP1 expression levels are not significantly affected by the circadian clock in seedlings grown under LL conditions. The levels of the YFP:LIP1 protein expressed under the control of the 35S promoter, shows a low amplitude variation, with protein levels peaking near the beginning of subjective night under LL conditions. In hypocotyl epidermal cells of dark and light-grown seedlings, a YFP:LIP1 fusion protein can be seen in the cytoplasm and the nucleus, and does not cluster in nuclear speckles. LIP1 may also be involved in photomorphogenesis.","AT4G27030","FADA",29.362,1.8999,0.59174,3.2108,1.3238E-3,0.0074345,"full_name=fatty acid desaturase A. fatty acid desaturase A. Encodes an unusual palmitate desaturase that is highly substrate specific. It introduces a delta-3 trans double bond at palmitate at the sn-2 position of phosphatidylglycerol."]
["AT4G13495",null,1643.4,0.39797,0.10338,3.8494,{"v":1.18E-4,"d":"1.18E-04"},{"v":0.00068,"d":"6.80E-04"},"other_RNA. Unknown gene","AT5G66420",null,689.39,-0.50099,0.15042,-3.3305,{"v":0.000867,"d":"8.67E-04"},0.0049609,"TIM-barrel signal transduction protein.","AT1G08540","SIG2",513.98,-0.57284,0.17854,-3.2085,0.0013344,0.0074845,"full_name=RNApolymerase sigma subunit 2. RNApolymerase sigma subunit 2. Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light."]
["AT4G39380",null,47.408,1.7983,0.46754,3.8463,{"v":1.2E-4,"d":"1.20E-04"},{"v":0.000688,"d":"6.88E-04"},"TSL-kinase interacting-like protein.","AT1G28570",null,43.275,5.1704,1.5539,3.3274,{"v":0.000877,"d":"8.77E-04"},0.0050122,"SGNH hydrolase-type esterase superfamily protein.","AT5G01350",null,766.32,0.51754,0.1615,3.2047,1.3521E-3,0.0075768,"UvrABC system C protein."]
["AT3G62840",null,1482,0.39701,0.10324,3.8454,{"v":1.2E-4,"d":"1.20E-04"},{"v":0.00069,"d":"6.90E-04"},"Small nuclear ribonucleoprotein family protein.","AT3G48730","GSA2",1440.2,0.4394,0.13213,3.3256,{"v":0.000882,"d":"8.82E-04"},0.0050426,"full_name=glutamate-1-semialdehyde 2,1-aminomutase 2. glutamate-1-semialdehyde 2,1-aminomutase 2.","AT1G33240","GTL1",375.94,-0.61632,0.19235,-3.2042,0.0013543,0.0075849,"full_name=GT-2-like 1. GT-2-like 1. Encodes a plant transcriptional activator that contains two separate, but similar, trihelix DNA-binding domains, similar to GT-2. Gene is expressed in all aerial parts of the plant, with higher level of expression in siliques. At-GTL2 was thought to be a duplicated copy of this gene but is likely to be a cloning artefact, the result of a chimeric clone. Regulates ploidy-dependent cell growth in trichome."]
["AT4G13345","MEE55",171.56,-1.1887,0.30949,-3.8409,{"v":0.000123,"d":"1.23E-04"},{"v":0.000702,"d":"7.02E-04"},"full_name=maternal effect embryo arrest 55. Serinc-domain containing serine and sphingolipid biosynthesis protein.","AT5G01300",null,567.19,-2.5016,0.75273,-3.3234,{"v":0.000889,"d":"8.89E-04"},0.0050719,"PEBP (phosphatidylethanolamine-binding protein) family protein.","AT2G36370",null,110.8,0.99501,0.31095,3.1999,0.0013746,0.0076844,"ubiquitin-protein ligase."]
["AT1G48050","KU80",438.97,-0.6182,0.16101,-3.8396,{"v":0.000123,"d":"1.23E-04"},{"v":0.000705,"d":"7.05E-04"},"Ku80 family protein. Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity. Binds double stranded DNA breaks as a heterodimer with Ku70, involved in non-homologous end joining repair. Mutants are defective in T-DNA integration. Over expression confers increased resistance to DNA damage agents and increased susceptibility to T-DNA transformation.","AT2G24500","FZF",583.48,-0.49,0.14753,-3.3214,{"v":0.000896,"d":"8.96E-04"},0.0051052,"Zinc finger protein 622. Encodes a C2H2 zinc finger protein FZF.","AT5G25830","GATA12",95.893,-1.0881,0.34018,-3.1987,0.0013806,0.0077113,"full_name=GATA transcription factor 12. GATA transcription factor 12. Encodes a member of the GATA factor family of zinc finger transcription factors."]
["AT1G47405",null,14.419,-4.859,1.2656,-3.8392,{"v":0.000123,"d":"1.23E-04"},{"v":0.000706,"d":"7.06E-04"},"transposable_element_gene.","AT5G01870",null,101.28,1.5449,0.46538,3.3196,{"v":9.01E-4,"d":"9.01E-04"},0.0051336,"Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.","AT1G21110","IGMT3",14.29,3.7884,1.1847,3.1978,0.001385,0.0077311,"full_name=indole glucosinolate O-methyltransferase 3. O-methyltransferase family protein."]
["AT4G16745",null,85.055,-1.3724,0.35755,-3.8383,{"v":0.000124,"d":"1.24E-04"},{"v":0.000708,"d":"7.08E-04"},"Exostosin family protein.","AT1G05010","EFE",96.686,-1.1642,0.35084,-3.3184,{"v":0.000905,"d":"9.05E-04"},0.0051526,"full_name=ethylene-forming enzyme. ethylene-forming enzyme. Encodes 1-aminocyclopropane-1-carboxylate oxidase","AT2G32860","BGLU33",6.0704,6.0276,1.8859,3.1961,1.3928E-3,0.0077639,"full_name=beta glucosidase 33. beta glucosidase 33."]
["AT2G02130","LCR68",635.86,-0.65208,0.17005,-3.8346,{"v":1.26E-4,"d":"1.26E-04"},{"v":0.000717,"d":"7.17E-04"},"full_name=low-molecular-weight cysteine-rich 68. low-molecular-weight cysteine-rich 68. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","AT5G11680",null,392.27,-0.59016,0.17796,-3.3162,{"v":0.000912,"d":"9.12E-04"},0.0051859,"classical AGP protein.","AT1G34300",null,171.27,0.84545,0.26467,3.1943,0.0014017,0.0078074,"lectin protein kinase family protein."]
["AT2G48010","RKF3",209.17,-0.827,0.21582,-3.832,{"v":1.27E-4,"d":"1.27E-04"},{"v":0.000724,"d":"7.24E-04"},"full_name=receptor-like kinase in in flowers 3. receptor-like kinase in in flowers 3. receptor-like serine/threonine kinase (RKF3)","AT1G27040","NPF4.5",17.717,-3.3406,1.0078,-3.3147,{"v":0.000917,"d":"9.17E-04"},5.208E-3,"Major facilitator superfamily protein.","AT4G25500","RS40",766.04,0.63219,0.19816,3.1904,1.421E-3,0.0079055,"full_name=arginine/serine-rich splicing factor 40. arginine/serine-rich splicing factor 35. encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926."]
["AT2G38905",null,38.226,-2.0288,0.53018,-3.8267,{"v":0.00013,"d":"1.30E-04"},{"v":0.000739,"d":"7.39E-04"},"Low temperature and salt responsive protein family.","AT1G16350",null,1483.9,-0.36982,0.11165,-3.3124,{"v":0.000925,"d":"9.25E-04"},0.0052438,"Aldolase-type TIM barrel family protein.","AT1G04140",null,919.76,0.45993,0.14423,3.1888,0.0014286,0.0079356,"Transducin family protein / WD-40 repeat family protein."]
["AT1G74750",null,67.308,1.5319,0.40044,3.8256,{"v":0.00013,"d":"1.30E-04"},{"v":0.000742,"d":"7.42E-04"},"Pentatricopeptide repeat (PPR) superfamily protein.","AT3G30300",null,1385.5,0.38196,0.11547,3.308,{"v":0.00094,"d":"9.40E-04"},0.0053217,"O-fucosyltransferase family protein.","AT1G52100",null,384.68,0.69015,0.21648,3.188,0.0014324,0.0079497,"Mannose-binding lectin superfamily protein."]
["AT3G59660","BAGP1",285.52,-0.79109,0.20688,-3.8239,{"v":0.000131,"d":"1.31E-04"},{"v":0.000746,"d":"7.46E-04"},"C2 domain-containing protein / GRAM domain-containing protein.","AT4G16980",null,26.59,1.9615,0.59306,3.3075,{"v":9.41E-4,"d":"9.41E-04"},0.0053284,"arabinogalactan-protein family.","AT3G61790","SINAT3",239.1,0.73177,0.22955,3.1878,1.4338E-3,7.9527E-3,"Protein with RING/U-box and TRAF-like domain."]
["AT3G15070","TEAR2",235.81,-0.78552,0.20559,-3.8209,{"v":0.000133,"d":"1.33E-04"},{"v":0.000755,"d":"7.55E-04"},"RING/U-box superfamily protein.","AT5G54490","PBP1",16.727,2.7823,0.84185,3.305,{"v":9.5E-4,"d":"9.50E-04"},0.0053711,"full_name=pinoid-binding protein 1. pinoid-binding protein 1. Encodes a PINOID (PID)-binding protein containing putative EF-hand calcium-binding motifs. The interaction is dependent on the presence of calcium. mRNA expression is up-regulated by auxin. Not a phosphorylation target of PID, likely acts upstream of PID to regulate the activity of this protein in response to changes in calcium levels.","AT3G13560",null,86.291,-1.0883,0.34157,-3.1862,1.4418E-3,0.0079886,"O-Glycosyl hydrolases family 17 protein."]
["AT2G40610","EXPA8",9.984,6.7222,1.7599,3.8197,{"v":1.34E-4,"d":"1.34E-04"},{"v":0.000757,"d":"7.57E-04"},"full_name=expansin A8. expansin A8. member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","AT5G22300","NIT4",7.4706,-5.918,1.7923,-3.302,{"v":0.00096,"d":"9.60E-04"},0.0054194,"full_name=nitrilase 4. nitrilase 4. encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway.","AT5G18570","EMB269",328.02,-0.70999,0.22309,-3.1825,0.00146,0.0080766,"full_name=EMBRYO DEFECTIVE 269. GTP1/OBG family protein. Encodes AtObgC, a plant ortholog of bacterial Obg. AtObgC is a chloroplast-targeting GTPase essential for early embryogenesis. Mutations in this locus result in embryo lethality. The protein is dually localized in the stroma and the inner envelope membrane and is involved in thylakoid membrane biogenesis and functions primarily in plastid ribosome biogenesis during chloroplast development."]
["AT1G04690","KAB1",1775.4,-0.39362,0.10305,-3.8197,{"v":1.34E-4,"d":"1.34E-04"},{"v":0.000757,"d":"7.57E-04"},"full_name=potassium channel beta subunit 1. potassium channel beta subunit 1.","AT5G20230","BCB",21.257,-2.4136,0.73102,-3.3017,{"v":0.000961,"d":"9.61E-04"},0.0054231,"full_name=blue-copper-binding protein. blue-copper-binding protein. Al-stress-induced gene","AT5G08300",null,484.56,-0.55014,0.17288,-3.1823,1.4612E-3,0.0080808,"Succinyl-CoA ligase, alpha subunit."]
["AT1G13740","AFP2",228.94,-0.97852,0.25635,-3.8172,{"v":1.35E-4,"d":"1.35E-04"},{"v":0.000764,"d":"7.64E-04"},"full_name=ABI five binding protein 2. ABI five binding protein 2. Encodes a member of a small plant-specific gene family whose members interact with ABI5 and appear to be involved in mediating stress responses. AFP2 mutants affect a number of ABA mediated processes such as germination and response to osmotic and sugar stress. AFP2 nuclear localization is stress dependent.","AT5G07500","PEI1",17.765,-2.9616,0.89807,-3.2978,{"v":0.000974,"d":"9.74E-04"},0.0054918,"Zinc finger C-x8-C-x5-C-x3-H type family protein. Encodes an embryo-specific zinc finger transcription factor required for heart-stage embryo formation.","AT1G29770",null,12.419,3.4695,1.0906,3.1812,0.0014664,0.0080999,"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein."]
["AT3G56330","TRM1C",76.962,1.5979,0.41902,3.8135,{"v":1.37E-4,"d":"1.37E-04"},{"v":0.000774,"d":"7.74E-04"},"N2,N2-dimethylguanosine tRNA methyltransferase.","AT5G22920","RZPF34",50.765,1.5473,0.46952,3.2956,{"v":0.000982,"d":"9.82E-04"},0.005529,"CHY-type/CTCHY-type/RING-type Zinc finger protein. Encodes a protein with sequence similarity to RING, zinc finger proteins. Loss of function mutations show reduced (15%) stomatal aperture under non stress conditions.","AT3G19895",null,130.42,0.92568,0.29128,3.178,0.0014829,0.0081809,"RING/U-box superfamily protein."]
["AT1G45231","TGS1",161.46,0.9259,0.24297,3.8107,{"v":0.000139,"d":"1.39E-04"},{"v":0.000782,"d":"7.82E-04"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT2G39450","MTP11",118.62,0.95311,0.28944,3.2929,{"v":0.000992,"d":"9.92E-04"},0.0055738,"Cation efflux family protein. Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn<sup>2+</sup> and Cu<sup>2+</sup> tolerance.","AT5G37600","GSR 1",781.69,-0.53401,0.16815,-3.1758,0.0014944,0.008232,"full_name=glutamine synthase clone R1. hypothetical protein. encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium"]
["AT2G03120","SPP",1201.9,-0.45524,0.11958,-3.807,{"v":0.000141,"d":"1.41E-04"},{"v":0.000793,"d":"7.93E-04"},"full_name=signal peptide peptidase. signal peptide peptidase. homologous to Signal Peptide Peptidases (SPP), required for pollen development and pollen germination. No homozygotes could be recovered from a T-DNA insertion mutant.","AT5G64680",null,352.29,-0.60754,0.18456,-3.2918,{"v":0.000996,"d":"9.96E-04"},0.0055907,"mediator-associated protein.","AT3G50740","UGT72E1",29.202,1.8733,0.59,3.1751,0.0014979,0.0082438,"full_name=UDP-glucosyl transferase 72E1. UDP-glucosyl transferase 72E1. UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism."]
["AT2G47470","UNE5",2788.9,-0.58062,0.15256,-3.8059,{"v":0.000141,"d":"1.41E-04"},{"v":0.000796,"d":"7.96E-04"},"full_name=UNFERTILIZED EMBRYO SAC 5. thioredoxin family protein. Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.","AT1G26960","AtHB23",49.397,1.3795,0.41933,3.2898,1.0026E-3,0.005627,"full_name=homeobox protein 23. homeobox protein 23. Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.","AT5G03150","JKD",98.142,-1.0651,0.33567,-3.1731,1.5083E-3,0.0082963,"full_name=JACKDAW. C2H2-like zinc finger protein. JKD is a nuclear-localized putative transcription factor with three zinc finger domains. jkd mutants show a number of root patterning defects including ectopic periclinal divisions in the cortex, increased cell numbers in the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. jkd mutants also have a reduced number of meristematic cells in their roots. JKD can interact with the SCR and SHR proteins implicated in root patterning, as well as another zinc finger transcription factor, MAGPIE. All of these interactions require the first zinc finger in JKD according to a Y2H assay. There are also transcriptional interactions among these proteins. The initiation of JKD transcription does not appear to depend on SCR and SHR, but later expression in the post-embryonic QC cells and ground tissue initials is reduced in scr and shr mutants. JKD also appears to be required for SCR transcription beginning in the embryo. There is also some evidence that JKD plays a role in promoting the movement of SHR into the nucleus, particularly in QC cells, but this may be indirect."]
["AT3G09210","PTAC13",707.3,0.51544,0.13549,3.8041,{"v":0.000142,"d":"1.42E-04"},{"v":0.000801,"d":"8.01E-04"},"full_name=plastid transcriptionally active 13. plastid transcriptionally active 13.","AT3G20960","CYP705A33",20.74,2.3417,0.71196,3.2891,0.0010051,0.0056363,"full_name=cytochrome P450, family 705, subfamily A, polypeptide 33. cytochrome P450, family 705, subfamily A, polypeptide 33. member of CYP705A","AT2G23340","DEAR3",44.836,1.5943,0.50257,3.1724,0.0015121,0.0083096,"full_name=DREB and EAR motif protein 3. DREB and EAR motif protein 3. encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10."]
["AT3G26590",null,9.7637,-6.7818,1.7838,-3.8018,{"v":1.44E-4,"d":"1.44E-04"},{"v":0.000807,"d":"8.07E-04"},"MATE efflux family protein.","AT3G50360","CEN2",628.5,-0.51681,0.1573,-3.2854,0.0010182,0.0056995,"full_name=centrin2. centrin2.","AT3G55920","CYP21-2",84.936,-1.0934,0.34509,-3.1684,0.0015327,0.0084081,"Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein."]
["AT3G27080","TOM20-3",526.12,0.5679,0.14943,3.8005,{"v":1.44E-4,"d":"1.44E-04"},{"v":0.000811,"d":"8.11E-04"},"full_name=translocase of outer membrane 20 kDa subunit 3. translocase of outer membrane 20 kDa subunit 3. Component of the TOM complex involved in transport of nuclear-encoded mitochondrial proteins","AT5G26670","ATPAE10",31.035,2.4218,0.73743,3.2841,1.023E-3,0.0057244,"Pectinacetylesterase family protein.","AT1G33040","NACA5",423.65,-0.61568,0.19436,-3.1678,1.5359E-3,0.008421,"full_name=nascent polypeptide-associated complex subunit alpha-like protein 5. nascent polypeptide-associated complex subunit alpha-like protein 5."]
["AT5G42090",null,1644.7,-0.38341,0.10102,-3.7952,{"v":0.000148,"d":"1.48E-04"},{"v":0.000828,"d":"8.28E-04"},"Lung seven transmembrane receptor family protein.","AT2G39130",null,269.26,0.70073,0.2138,3.2775,0.0010472,0.005853,"Transmembrane amino acid transporter family protein.","AT5G17770","CBR",378.27,-0.63082,0.19925,-3.1659,1.5458E-3,0.0084675,"full_name=NADH:cytochrome B5 reductase 1. NADH:cytochrome B5 reductase 1. Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor."]
["AT5G24600",null,86.438,-1.3714,0.36141,-3.7946,{"v":0.000148,"d":"1.48E-04"},{"v":0.000829,"d":"8.29E-04"},"TRP-like ion channel protein (Protein of unknown function, DUF599).","AT3G11800",null,395.61,-0.55747,0.17026,-3.2742,1.0596E-3,0.0059155,"Expp1 protein.","AT1G15140","#ERROR!",224.89,-0.76443,0.24154,-3.1649,1.5516E-3,0.0084888,"FAD/NAD(P)-binding oxidoreductase."]
["AT1G04940","Tic20-I",691.84,0.53646,0.14146,3.7924,{"v":0.000149,"d":"1.49E-04"},{"v":0.000835,"d":"8.35E-04"},"full_name=translocon at the inner envelope membrane of chloroplasts 20-I. translocon at the inner envelope membrane of chloroplasts 20. Tic20 is believed to function as a component of the protein-conducting channel at the inner envelope membrane. Genes AT1G04940 and AT1G04945 were switched for the TAIR7 genome release to give consistency with MIPs annotation. The Arabidopsis genome encodes four Tic20 homologous proteins, AT1G04940(Tic20-I), AT2G47840(Tic20-II), AT4G03320(Tic20-IV) and AT5G55710(Tic20-V).","AT5G47150",null,7.3085,-5.886,1.799,-3.2718,0.0010686,0.0059582,"YDG/SRA domain-containing protein.","AT2G42030","MUSE2",315.62,0.70047,0.2214,3.1639,0.0015568,0.0085075,"RING/U-box superfamily protein."]
["AT5G65640","bHLH093",2641.8,-0.71068,0.18741,-3.7921,{"v":0.000149,"d":"1.49E-04"},{"v":0.000836,"d":"8.36E-04"},"full_name=beta HLH protein 93. beta HLH protein 93.","AT3G14690","CYP72A15",702.8,-0.49072,0.14999,-3.2716,1.0696E-3,0.0059621,"full_name=cytochrome P450, family 72, subfamily A, polypeptide 15. cytochrome P450, family 72, subfamily A, polypeptide 15. putative cytochrome P450","AT5G53710",null,10.081,4.2535,1.3445,3.1635,0.0015588,0.0085133,"hypothetical protein."]
["AT4G35920","MCA1",387.36,-0.64098,0.16924,-3.7873,{"v":0.000152,"d":"1.52E-04"},{"v":0.000851,"d":"8.51E-04"},"full_name=mid1-complementing activity 1. PLAC8 family protein. Encodes an integral plasma membrane protein. Functionally complements the yeast mid1 mutant, a deficiency of Ca2+ influx. Involved in Ca2+ influx and mechanical sensing in roots. An over-expression line showed increased Ca2+ uptake than the wild type plant. The primary root of a knock-out mutant failed to penetrate a harder agar medium from a softer medium.","AT1G15120",null,932.15,0.57644,0.17643,3.2673,0.0010859,0.0060425,"Ubiquinol-cytochrome C reductase hinge protein.","AT4G08870","ARGAH2",342.22,-0.66044,0.20886,-3.1621,0.0015664,0.008542,"full_name=arginine amidohydrolase 2. Arginase/deacetylase superfamily protein. Encodes one of the two arginase in the genome. Gene expression is enhanced by methyl jasmonate treatment. It is involved in the defense response to B.cinerea."]
["AT3G56490","HIT3",928.16,0.45173,0.11933,3.7856,{"v":0.000153,"d":"1.53E-04"},{"v":0.000856,"d":"8.56E-04"},"full_name=HIS triad family protein 3. HIS triad family protein 3. Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.","AT5G43100",null,364.29,0.56572,0.17325,3.2652,1.0937E-3,0.0060768,"Eukaryotic aspartyl protease family protein.","AT5G14750","MYB66",87.736,-1.4402,0.45579,-3.1598,0.0015786,0.0086008,"full_name=myb domain protein 66. myb domain protein 66. Encodes a MyB-related protein containing R2 and R3 repeats, involved in root and hypocotyl epidermal cell fate determination. Loss of function mutations make extra root hairs. Nuclear localized protein is a positive regulator for expression of CAPRICE (CPC)."]
["AT4G19500",null,686.43,-0.52893,0.1398,-3.7835,{"v":1.55E-4,"d":"1.55E-04"},{"v":0.000862,"d":"8.62E-04"},"nucleoside-triphosphatase/transmembrane receptor/nucleotide binding/ATP binding protein.","AT1G18000",null,14.279,2.7783,0.85086,3.2652,1.0937E-3,0.0060768,"Major facilitator superfamily protein.","AT5G52510","SCL8",193.16,0.82964,0.26265,3.1587,1.5846E-3,0.0086285,"full_name=SCARECROW-like 8. SCARECROW-like 8."]
["AT3G48490",null,56.839,1.6218,0.42887,3.7815,{"v":1.56E-4,"d":"1.56E-04"},{"v":0.000869,"d":"8.69E-04"},"hypothetical protein.","AT1G80850",null,43.055,1.5881,0.48705,3.2607,0.0011115,0.0061705,"DNA glycosylase superfamily protein.","AT5G02450",null,1975.9,-0.47906,0.15179,-3.1561,0.001599,8.6996E-3,"Ribosomal protein L36e family protein."]
["AT5G64620","C/VIF2",177.51,-0.93505,0.24738,-3.7798,{"v":0.000157,"d":"1.57E-04"},{"v":0.000873,"d":"8.73E-04"},"full_name=cell wall / vacuolar inhibitor of fructosidase 2. cell wall / vacuolar inhibitor of fructosidase 2. Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling.","AT5G22070","RSE1",569.1,0.4724,0.145,3.258,1.122E-3,0.0062192,"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein.","AT1G04810",null,782.09,0.48926,0.15529,3.1506,0.0016291,0.00885,"26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit."]
["AT5G07250","RBL3",124.34,-1.0931,0.28947,-3.7763,{"v":0.000159,"d":"1.59E-04"},{"v":0.000885,"d":"8.85E-04"},"full_name=RHOMBOID-like protein 3. RHOMBOID-like protein 3.","AT5G11890","EMB3135",204.01,0.71307,0.21911,3.2543,0.0011365,0.0062925,"full_name=EMBRYO DEFECTIVE 3135. harpin-induced protein.","AT3G29030","EXPA5",66.207,1.2239,0.38877,3.1482,0.0016429,0.008912,"full_name=expansin A5. expansin A5. Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)"]
["AT5G66675",null,110.19,1.1782,0.31217,3.7744,{"v":0.00016,"d":"1.60E-04"},{"v":0.000891,"d":"8.91E-04"},"transmembrane protein, putative (DUF677).","AT4G24570","DIC2",61.666,-1.4002,0.43039,-3.2534,1.1405E-3,0.0063069,"full_name=dicarboxylate carrier 2. dicarboxylate carrier 2. Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470).","AT2G37100",null,42.893,-1.5445,0.49088,-3.1463,0.0016532,0.0089601,"protamine P1 family protein."]
["AT4G17540",null,208.59,0.86833,0.23008,3.774,{"v":0.000161,"d":"1.61E-04"},{"v":8.92E-4,"d":"8.92E-04"},"dynamin.","AT5G04870","CPK1",447.74,0.51448,0.15815,3.2532,1.1412E-3,0.0063089,"full_name=calcium dependent protein kinase 1. calcium dependent protein kinase 1. A calcium-dependent protein kinase that can phosphorylate phenylalanine ammonia lyase (PAL), a key enzyme in pathogen defense.","AT1G03970","GBF4",209.88,0.84271,0.26797,3.1448,0.001662,0.0090023,"full_name=G-box binding factor 4. G-box binding factor 4. encodes a basic leucine zipper G-box binding factor that can bind to G-box motifs only as heterodimers with GBF2 or GBF3. A single amino acid change can confer G-box binding as homodimers."]
["AT5G18600","ROXY10",16.105,-3.6463,0.9668,-3.7715,{"v":0.000162,"d":"1.62E-04"},{"v":0.000899,"d":"8.99E-04"},"Thioredoxin superfamily protein.","AT1G21370",null,172.68,0.79421,0.24437,3.25,0.0011541,0.0063692,"transmembrane protein.","AT1G33250",null,192.52,0.75643,0.24063,3.1435,1.6692E-3,0.009028,"beta-1,3-n-acetylglucosaminyltransferase radical fringe protein, putative (DUF604)."]
["AT1G62820","CML14",231.14,-0.78307,0.20765,-3.7711,{"v":1.63E-4,"d":"1.63E-04"},{"v":0.0009,"d":"9.00E-04"},"Calcium-binding EF-hand family protein.","AT5G54040",null,9.3166,4.0182,1.2366,3.2494,1.1566E-3,0.0063775,"Cysteine/Histidine-rich C1 domain family protein.","AT1G15730",null,282.42,-0.66166,0.21062,-3.1415,1.6811E-3,9.0846E-3,"Cobalamin biosynthesis CobW-like protein."]
["AT3G25140","QUA1",942.39,-0.46056,0.12216,-3.7702,{"v":1.63E-4,"d":"1.63E-04"},{"v":0.000902,"d":"9.02E-04"},"full_name=QUASIMODO 1. Nucleotide-diphospho-sugar transferases superfamily protein. Quasimodo1, encodes a glycosyltransferase, involved in homogalacturonan biosynthesis; mutant shows cell adhesion defect and lower wall uronic acid content.","AT1G03770","RING1B",207.25,-0.73997,0.2279,-3.2469,1.1668E-3,0.0064299,"full_name=RING 1B. RING 1B. Encodes a nuclear localized protein with similarity to animal polycomb repressive core complex1 (PRC1) core component RING.Appears to function redundantly with ATRING1a, a close paralog. Both interact physically with CLF and LHP1 and appear to function together to repress class I KNOX gene expression.","AT2G46225","ABIL1",168.93,-0.8541,0.27193,-3.1409,0.0016843,0.0090965,"full_name=ABI-1-like 1. ABI-1-like 1. Encodes a subunit of the WAVE complex. The WAVE complex is required for activation of ARP2/3 complex which functions in actin microfilament nucleation and branching. One of four ABI-like proteins."]
["AT3G52290","IQD3",150.97,-1.0258,0.27222,-3.7683,{"v":1.64E-4,"d":"1.64E-04"},{"v":0.000908,"d":"9.08E-04"},"full_name=IQ-domain 3. IQ-domain 3.","AT2G26460","SMU2",257.98,-0.67949,0.20936,-3.2455,0.0011724,0.0064548,"full_name=SUPPRESSORS OF MEC-8 AND UNC-52 2. RED family protein. Encodes SMU2, a protein involved in RNA splicing.","AT3G06530",null,520.64,-0.60068,0.19131,-3.1398,0.0016904,9.1214E-3,"ARM repeat superfamily protein."]
["AT1G13450","GT-1",434.69,-0.71133,0.18883,-3.767,{"v":1.65E-4,"d":"1.65E-04"},{"v":0.000912,"d":"9.12E-04"},"full_name=GT-1. Homeodomain-like superfamily protein. Encodes GT-1, a plant transcription factor that binds to one of the cis-acting elements, BoxII, which resides within the upstream promoter region of light-responsive genes. GT-1 was assumed to act as a molecular switch modulated through Ca(2+)-dependent phosphorylation/dephosphorylation in response to light signals.","AT5G20360","Phox3",162.17,0.79026,0.24387,3.2404,0.0011935,0.0065616,"full_name=Phox3. Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein. Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","AT5G19280","KAPP",328.34,0.64986,0.20716,3.1371,0.0017065,0.0091948,"full_name=kinase associated protein phosphatase. kinase associated protein phosphatase. kinase associated protein phosphatase composed of three domains: an amino-terminal signal anchor, a kinase interaction (KI) domain, and a type 2C protein phosphatase catalytic region"]
["AT5G43460",null,654.58,0.50384,0.13383,3.7649,{"v":0.000167,"d":"1.67E-04"},{"v":9.19E-4,"d":"9.19E-04"},"HR-like lesion-inducing protein-like protein.","AT1G58520","RXW8",66.072,1.284,0.39652,3.2382,1.2028E-3,0.0066069,"GDSL-like lipase/acylhydrolase superfamily protein.","AT5G14390",null,388.13,0.63819,0.20354,3.1355,0.0017157,0.0092365,"alpha/beta-Hydrolases superfamily protein."]
["AT1G14890",null,203.77,0.88503,0.23528,3.7617,{"v":0.000169,"d":"1.69E-04"},{"v":0.000929,"d":"9.29E-04"},"Plant invertase/pectin methylesterase inhibitor superfamily protein.","AT4G27530",null,47.342,-1.7296,0.53475,-3.2343,1.2193E-3,0.006688,"hypothetical protein.","AT5G48470","PRDA1",190.93,-0.96918,0.30949,-3.1315,0.001739,0.0093482,"hypothetical protein."]
["AT2G42960",null,124.16,1.0482,0.27882,3.7595,{"v":0.00017,"d":"1.70E-04"},{"v":0.000937,"d":"9.37E-04"},"Protein kinase superfamily protein.","AT5G36220","CYP81D1",72.687,-1.1892,0.36807,-3.231,0.0012337,0.0067611,"full_name=cytochrome P450, family 81, subfamily D, polypeptide 1. cytochrome p450 81d1. member of CYP81D family of cytochrome p450s. This gene was originally called CYP91A1, but was later renamed to CYP81D1.","AT5G35560",null,292.94,0.66398,0.2122,3.129,0.001754,0.0094204,"DENN (AEX-3) domain-containing protein."]
["AT5G56100",null,320.82,0.70812,0.18841,3.7585,{"v":0.000171,"d":"1.71E-04"},{"v":0.00094,"d":"9.40E-04"},"glycine-rich protein / oleosin.","AT3G62870",null,9943.3,-0.33688,0.10432,-3.2292,0.0012414,0.0067994,"Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein.","AT2G35050",null,430.86,0.56988,0.18215,3.1286,1.7561E-3,0.0094264,"kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein."]
["AT1G47620","CYP96A8",14.766,4.1742,1.1116,3.7553,{"v":1.73E-4,"d":"1.73E-04"},{"v":0.000951,"d":"9.51E-04"},"full_name=cytochrome P450, family 96, subfamily A, polypeptide 8. cytochrome P450, family 96, subfamily A, polypeptide 8. member of CYP96A","AT5G26220","GGCT2;1",86.9,-1.2163,0.3769,-3.2272,0.0012502,0.0068413,"ChaC-like family protein.","AT1G51670","HTT5",5.7524,5.9587,1.9062,3.126,1.7718E-3,0.0095022,"hypothetical protein."]
["AT1G69520",null,9.268,6.6116,1.7616,3.7532,{"v":1.75E-4,"d":"1.75E-04"},{"v":0.000957,"d":"9.57E-04"},"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein.","AT1G01240",null,273.2,-0.67268,0.20888,-3.2204,0.0012803,0.0069929,"transmembrane protein.","AT3G51260","PAD1",537.68,-0.57226,0.18318,-3.124,1.784E-3,0.009551,"full_name=20S proteasome alpha subunit PAD1. 20S proteasome alpha subunit PAD1. 20S proteosomal alpha subunits. Interacts with SnRK, SKP1/ASK1 during proteasomal binding of an SCF ubiquitin ligase."]
["AT3G11290",null,313.32,-0.70664,0.18843,-3.7501,{"v":0.000177,"d":"1.77E-04"},{"v":0.000969,"d":"9.69E-04"},"Myb/SANT-like DNA-binding domain protein.","AT2G27080","NHL13",20.722,-2.3696,0.73592,-3.2199,1.2825E-3,0.0070019,"Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family.","AT1G27680","APL2",403.99,-0.66176,0.21196,-3.122,0.001796,0.0096097,"full_name=ADPGLC-PPase large subunit. ADPGLC-PPase large subunit. ADP-glucose pyrophosphorylase catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms of the large subunit (ApL1-4) have been described.Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions."]
["AT4G17790",null,307.87,-0.77032,0.20555,-3.7476,{"v":0.000179,"d":"1.79E-04"},{"v":0.000978,"d":"9.78E-04"},"SNARE associated Golgi protein family.","AT3G57390","AGL18",120.71,-0.98238,0.30526,-3.2182,0.00129,0.0070368,"full_name=AGAMOUS-like 18. AGAMOUS-like 18. encodes a MADS-box containing protein likely to be a transcription factor that is expressed in endosperm and developing gametophytes. The protein sequence is most similar to that of AGL15, which is expressed in developing embryos.","AT1G29400","ML5",472.19,0.54052,0.17322,3.1205,0.0018057,0.0096534,"full_name=MEI2-like protein 5. MEI2-like protein 5. A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices."]
["AT3G59810","LSM6A",327.45,0.66177,0.17675,3.7441,{"v":0.000181,"d":"1.81E-04"},{"v":0.00099,"d":"9.90E-04"},"full_name=SM-like 6A. Small nuclear ribonucleoprotein family protein.","AT1G45120",null,95.046,1.1024,0.34291,3.2149,0.0013048,0.0071092,"transposable_element_gene.","AT5G51850","TRM24",33.957,-1.8188,0.58321,-3.1186,0.0018172,0.0097034,"full_name=TON1 Recruiting Motif 24. hypothetical protein."]
["AT5G47230","ERF5",18.808,3.2417,0.86695,3.7392,{"v":1.85E-4,"d":"1.85E-04"},1.0083E-3,"full_name=ethylene responsive element binding factor 5. ethylene responsive element binding factor 5. encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-5). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.","AT2G31920","CORD7",10.649,3.3764,1.0505,3.214,0.001309,0.0071219,"elongation factor 1-delta, putative (DUF936).","AT5G08530","CI51",2056.7,0.39654,0.12722,3.1169,1.8277E-3,0.0097456,"full_name=51 kDa subunit of complex I. 51 kDa subunit of complex I."]
["AT1G08380","PSAO",1075,-0.48103,0.12869,-3.7381,{"v":1.85E-4,"d":"1.85E-04"},0.001012,"full_name=photosystem I subunit O. photosystem I subunit O. Encodes subunit O of photosystem I.","AT2G43240",null,103.54,0.9463,0.29454,3.2128,0.0013145,0.0071457,"Nucleotide-sugar transporter family protein.","AT4G29260","VSP3",125.51,-0.92171,0.29577,-3.1163,1.8314E-3,0.0097568,"HAD superfamily, subfamily IIIB acid phosphatase."]
["AT5G52300","LTI65",1172.6,0.67596,0.18094,3.7358,{"v":0.000187,"d":"1.87E-04"},1.0207E-3,"full_name=LOW-TEMPERATURE-INDUCED 65. CAP160 protein. encodes a protein that is induced in expression in response to water deprivation such as cold, high-salt, and dessication. The response appears to be via abscisic acid. The promoter region contains two ABA-responsive elements (ABREs) that are required for the dehydration-responsive expression of rd29B as cis-acting elements. Protein is a member of a gene family with other members found plants, animals and fungi.","AT1G20220","ATALBA2",938.61,-0.46077,0.14351,-3.2107,0.001324,7.1931E-3,"Alba DNA/RNA-binding protein.","AT2G33520","ATHCYSTM7",17.867,2.4491,0.78597,3.116,0.0018332,0.0097606,"cysteine-rich/transmembrane domain protein A."]
["AT4G02450","P23-1",2899,0.33223,0.088954,3.7349,{"v":0.000188,"d":"1.88E-04"},0.0010235,"HSP20-like chaperones superfamily protein.","AT5G07810",null,71.509,1.2056,0.37582,3.2078,0.0013374,0.0072598,"SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein.","AT2G22330","CYP79B3",167.11,-0.9128,0.29305,-3.1148,1.8406E-3,0.0097917,"full_name=cytochrome P450, family 79, subfamily B, polypeptide 3. cytochrome P450, family 79, subfamily B, polypeptide 3. Encodes a cytochrome P450. Involved in tryptophan metabolism. Converts Trp to indole-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates."]
["AT2G20585","NFD6",236.97,0.76766,0.2058,3.7301,{"v":0.000191,"d":"1.91E-04"},0.0010412,"full_name=NUCLEAR FUSION DEFECTIVE 6. nuclear fusion defective 6.","AT1G69270","RPK1",140.85,0.83681,0.26106,3.2054,1.3488E-3,0.0073086,"full_name=receptor-like protein kinase 1. receptor-like protein kinase 1. RPK1 is a leucine-rich receptor-like kinase located in the plasma membrane which is upregulated by abscisic acid, dehydration, high salt, low temperature, but not by other plant hormones. RPK1 knock-out and antisense plants show an ABA-insensitive phenotype. RPK1 plays a role in ABA-controlled cell proliferation and is a regulator of the ABA signal transduction pathway. Overexpression of the LRR domain has a dominant negative effect on RPK1. Mutations in RPK1 uncouple cotyledon anlagen and primordia by modulating epidermal cell shape and polarity.","AT1G30040","GA2OX2",75.723,1.2208,0.3922,3.1125,1.8549E-3,0.0098505,"full_name=gibberellin 2-oxidase. gibberellin 2-oxidase. Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities."]
["AT1G04210",null,763.08,0.48554,0.13022,3.7286,{"v":1.93E-4,"d":"1.93E-04"},1.0467E-3,"Leucine-rich repeat protein kinase family protein. Encodes a putative Raf-related kinase.","AT5G64840","ABCF5",1217.8,-0.42108,0.13139,-3.2049,1.3511E-3,0.0073173,"full_name=ATP-binding cassette F5. general control non-repressible 5. member of GCN subfamily","AT3G51890","CLC3",66.718,1.2084,0.38828,3.1122,0.001857,0.009856,"Clathrin light chain protein."]
["AT4G33010","GLDP1",5487.3,0.409,0.10974,3.727,{"v":1.94E-4,"d":"1.94E-04"},0.0010527,"full_name=glycine decarboxylase P-protein 1. glycine decarboxylase P-protein 1.","AT3G46500",null,37.274,1.5929,0.49728,3.2032,0.0013592,0.0073545,"2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.","AT4G17830","ATNAOD",334.02,-0.61157,0.19667,-3.1096,0.0018733,0.009934,"Peptidase M20/M25/M40 family protein."]
["AT3G07610","IBM1",386.91,0.63495,0.17048,3.7245,{"v":0.000196,"d":"1.96E-04"},0.0010617,"full_name=increase in bonsai methylation 1. Transcription factor jumonji (jmjC) domain-containing protein. IBM1 likely encodes a protein with histone H3mK9 demethylation activity. It may preferentially demethylate H3mK9 at low-copy loci to protect them from silencing by nearby heterochromatin by preventing the spread of cytosine methylation. BONSAI (At1g73177) is hypermethylated in ibm1 mutants. ibm1 mutants have morphological defects that become apparent at the F3 generation, including small narrow leaves, arrested flower development, and faulty pollen development. These phenotypes cannot result solely from the BONSAI hypermethylation. Aberrant phenotypes in ibm1 mutants in both DNA methylation and plant development can be suppressed by mutations in the KYP H3K9 methyltransferase or he CMT3 non CG-cytosine methylase.","AT1G27080","NRT1.6",7.2276,-5.8653,1.8322,-3.2012,0.0013684,0.0073959,"full_name=nitrate transporter 1.6. nitrate transporter 1.6. Encodes a protein with low-affinity nitrate transporter activity that is expressed in the vascular tissue of the funiculus and the silique. This plasma membrane-localized enzyme is predicted to have 12 transmembrane domains. Plants lacking NRT1.6 have reduced levels of nitrate in their seeds and have increased levels of early embryonic developmental defects and seed abortion.","AT1G72520","LOX4",5.7927,5.98,1.9245,3.1074,1.8877E-3,0.0099991,"full_name=lipoxygenase 4. PLAT/LH2 domain-containing lipoxygenase family protein."]
["AT5G58740","NMIG1",1063.4,-0.43505,0.11682,-3.724,{"v":0.000196,"d":"1.96E-04"},1.0627E-3,"HSP20-like chaperones superfamily protein.","AT5G01785",null,11.061,3.2025,1.0014,3.1982,1.3831E-3,0.0074669]
["AT2G16400","BLH7",367.08,-0.6583,0.17678,-3.7239,{"v":0.000196,"d":"1.96E-04"},0.0010629,"full_name=BEL1-like homeodomain 7. BEL1-like homeodomain 7.","AT2G17020",null,316.75,0.60681,0.18984,3.1965,0.0013911,0.0075081,"F-box/RNI-like superfamily protein."]
["AT2G36500",null,61.949,-1.4817,0.39815,-3.7215,{"v":0.000198,"d":"1.98E-04"},0.0010717,"CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein.","AT4G00680","ADF8",76.446,1.0821,0.3386,3.1958,1.3947E-3,0.0075184,"full_name=actin depolymerizing factor 8. actin depolymerizing factor 8."]
["AT1G02300","ATCATHB1",80.678,1.3783,0.37063,3.7187,{"v":0.0002,"d":"2.00E-04"},0.0010821,"Cysteine proteinases superfamily protein.","AT1G19660","BBD2",663.14,-0.45354,0.14197,-3.1946,0.0014003,0.0075382,"Wound-responsive family protein."]
["AT1G69270","RPK1",186.21,-0.86267,0.23204,-3.7178,{"v":0.000201,"d":"2.01E-04"},0.0010855,"full_name=receptor-like protein kinase 1. receptor-like protein kinase 1. RPK1 is a leucine-rich receptor-like kinase located in the plasma membrane which is upregulated by abscisic acid, dehydration, high salt, low temperature, but not by other plant hormones. RPK1 knock-out and antisense plants show an ABA-insensitive phenotype. RPK1 plays a role in ABA-controlled cell proliferation and is a regulator of the ABA signal transduction pathway. Overexpression of the LRR domain has a dominant negative effect on RPK1. Mutations in RPK1 uncouple cotyledon anlagen and primordia by modulating epidermal cell shape and polarity.","AT4G01410",null,184.07,-0.78126,0.24462,-3.1938,0.0014044,0.0075541,"Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family."]
["AT2G25900","ATCTH",328.04,-0.89316,0.2403,-3.7168,{"v":2.02E-4,"d":"2.02E-04"},0.0010889,"Zinc finger C-x8-C-x5-C-x3-H type family protein. Encodes a protein with two tandem-arrayed CCCH-type zinc fingers that binds RNA and is involved in RNA turnover.","AT1G66470","RHD6",122.82,0.87363,0.27361,3.193,0.0014079,7.5683E-3,"full_name=ROOT HAIR DEFECTIVE6. ROOT HAIR DEFECTIVE6."]
["AT4G39040","CFM4",931.87,0.51096,0.13754,3.7151,{"v":2.03E-4,"d":"2.03E-04"},0.0010944,"RNA-binding CRS1 / YhbY (CRM) domain protein.","AT3G01540","DRH1",2908.8,0.36313,0.11379,3.1913,0.0014163,0.0076022,"full_name=DEAD box RNA helicase 1. DEAD box RNA helicase 1. RNA HELICASE DRH1"]
["AT4G01810","ATSEC23A",600.88,-0.50914,0.13717,-3.7116,{"v":0.000206,"d":"2.06E-04"},0.0011081,"Sec23/Sec24 protein transport family protein.","AT1G14730",null,33.464,-1.8045,0.56581,-3.1892,1.4265E-3,0.0076483,"Cytochrome b561/ferric reductase transmembrane protein family."]
["AT1G02380",null,143.45,-1.0525,0.28373,-3.7097,{"v":0.000208,"d":"2.08E-04"},0.0011157,"transmembrane protein.","AT5G15400","MUSE3",646.97,-0.46474,0.14581,-3.1874,0.0014355,0.0076881,"U-box domain-containing protein."]
["AT4G27340","TRM5B",329.91,0.7688,0.2073,3.7087,{"v":0.000208,"d":"2.08E-04"},1.1198E-3,"Met-10+ like family protein.","AT4G36680","RPPR7",368.52,-0.57523,0.1805,-3.1869,1.4383E-3,0.0077005,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT1G75780","TUB1",83.109,1.3882,0.37459,3.7059,{"v":0.000211,"d":"2.11E-04"},0.001131,"full_name=tubulin beta-1 chain. tubulin beta-1 chain. beta tubulin gene downregulated by phytochrome A (phyA)-mediated far-red light high-irradiance and the phytochrome B (phyB)-mediated red light high-irradiance responses","AT1G25490","RCN1",1044.3,0.40327,0.12667,3.1835,1.4551E-3,0.0077819,"full_name=ROOTS CURL IN NPA. ARM repeat superfamily protein. One of three genes encoding phosphoprotein phosphatase 2A regulatory subunit A; Recessive ethylene-response mutant EER1 displays increased ethylene sensitivity in the hypocotyl and stem"]
["AT5G43780","APS4",919.61,-0.43588,0.11773,-3.7024,{"v":2.14E-4,"d":"2.14E-04"},1.1451E-3,"Pseudouridine synthase/archaeosine transglycosylase-like family protein. sulfate adenylyltransferase, ATP sulfurylase","AT5G57710","SMAX1",462.02,-0.57603,0.18115,-3.1798,1.4739E-3,0.0078712,"Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein. SMAX1 (SUPPRESSOR OF MAX2 1) is a member of an eight-gene family in Arabidopsis that has weak similarity to AtHSP101, a ClpB chaperonin required for thermotolerance. SMAX1 is an important component of KAR/SL signaling during seed germination and seedling growth, but is not necessary for all MAX2-dependent responses."]
["AT4G12250","GAE5",345.49,-0.63775,0.17236,-3.7,{"v":0.000216,"d":"2.16E-04"},0.0011551,"full_name=UDP-D-glucuronate 4-epimerase 5. UDP-D-glucuronate 4-epimerase 5. UDP-D-glucuronate 4-epimerase","AT1G08860","BON3",6.9196,-5.8043,1.8265,-3.1778,1.4839E-3,0.0079179,"full_name=BONZAI 3. Calcium-dependent phospholipid-binding Copine family protein. Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Overexpression of this gene suppresses bon1-1 phenotypes. Double mutant analyses with bon1-1 suggest that BON1 and BON3 have overlapping functions in maintaining cellular homeostasis and inhibiting cell death."]
["AT4G33865",null,1920.3,0.46422,0.12552,3.6983,{"v":0.000217,"d":"2.17E-04"},0.001162,"Ribosomal protein S14p/S29e family protein.","AT1G80090","CBSX4",6.871,-5.7949,1.8239,-3.1772,1.4869E-3,0.0079294,"full_name=CBS domain containing protein 4. Cystathionine beta-synthase (CBS) family protein."]
["AT2G42710",null,452.16,0.6245,0.16893,3.6968,{"v":0.000218,"d":"2.18E-04"},1.1672E-3,"Ribosomal protein L1p/L10e family.","AT3G01970","WRKY45",6.9519,-5.8168,1.8331,-3.1733,0.0015074,8.0272E-3,"full_name=WRKY DNA-binding protein 45. WRKY DNA-binding protein 45. member of WRKY Transcription Factor; Group I"]
["AT1G31817","NFD3",497.23,0.5648,0.15289,3.6942,{"v":0.000221,"d":"2.21E-04"},0.0011782,"full_name=NUCLEAR FUSION DEFECTIVE 3. Ribosomal L18p/L5e family protein.","AT3G61130","GAUT1",699.24,0.43174,0.1362,3.17,1.5245E-3,0.0081116,"full_name=galacturonosyltransferase 1. galacturonosyltransferase 1. Encodes a protein with putative galacturonosyltransferase activity."]
["AT5G50930","MHF1",40.871,1.8207,0.49329,3.6909,{"v":2.23E-4,"d":"2.23E-04"},0.001192,"Histone superfamily protein. Encodes a protein with similarity to mammalian MHF1 that acts in the same pathway as FANCM to restrain class II meiotic crossing over.","AT5G57760",null,224.85,-0.8143,0.25707,-3.1676,0.0015368,0.0081655,"hypothetical protein."]
["AT3G01970","WRKY45",9.0747,6.5841,1.7849,3.6887,{"v":0.000225,"d":"2.25E-04"},0.0012011,"full_name=WRKY DNA-binding protein 45. WRKY DNA-binding protein 45. member of WRKY Transcription Factor; Group I","AT3G01740",null,447.57,-0.51434,0.16242,-3.1668,0.0015414,0.0081829,"Mitochondrial ribosomal protein L37."]
["AT2G39050","EULS3",159.29,1.0277,0.2787,3.6876,{"v":0.000226,"d":"2.26E-04"},1.2059E-3,"full_name=Euonymus lectin S3. hydroxyproline-rich glycoprotein family protein. Encodes a nucleocytoplasmic lectin that is capable of binding carbohydrates.","AT5G40690",null,39.663,-1.5701,0.49606,-3.1651,1.5501E-3,0.0082248,"histone-lysine N-methyltransferase trithorax-like protein."]
["AT3G44600","CYP71",751.75,0.46786,0.12695,3.6853,{"v":0.000228,"d":"2.28E-04"},0.0012156,"full_name=cyclophilin 71. cyclophilin71. Cyclophilin71 is a WD40 domain cyclophilin, which functions in gene repression, organogenesis and meristem development. CYP71 physically interacts with histone H3.","AT2G45200","GOS12",339.66,0.55827,0.1764,3.1648,1.552E-3,0.0082276,"full_name=golgi snare 12. golgi snare 12. Encodes a member of the GOS1 (Golgi SNARE) gene family."]
["AT1G18610",null,150.85,-0.94317,0.25623,-3.681,{"v":2.32E-4,"d":"2.32E-04"},0.0012345,"Galactose oxidase/kelch repeat superfamily protein.","AT1G09794",null,71.097,-1.2217,0.38634,-3.1621,1.5662E-3,0.008289,"Cox19 family protein (CHCH motif)."]
["AT5G23220","NIC3",34.766,2.6957,0.73262,3.6796,{"v":2.34E-4,"d":"2.34E-04"},1.2403E-3,"full_name=nicotinamidase 3. nicotinamidase 3.","AT1G70460","PERK13",24.825,1.9201,0.60738,3.1613,0.0015706,0.0083078,"full_name=proline-rich extensin-like receptor kinase 13. root hair specific 10. Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807)."]
["AT5G46540","ABCB7",8.7434,-6.6224,1.8002,-3.6787,{"v":2.34E-4,"d":"2.34E-04"},0.0012437,"full_name=ATP-binding cassette B7. P-glycoprotein 7.","AT1G06530","PMD2",921.8,-0.49964,0.1581,-3.1603,1.5761E-3,0.0083294,"full_name=peroxisomal and mitochondrial division factor 2. Tropomyosin-like protein. Encodes PEROXISOMAL AND MITOCHONDRIAL DIVISION FACTOR2. Involved in mitochondrial morphogenesis."]
["AT1G22790",null,426.56,-0.58198,0.15832,-3.6761,{"v":0.000237,"d":"2.37E-04"},1.2549E-3,"Low affinity potassium transport system protein.","AT1G03250",null,289.06,-0.6076,0.19264,-3.1541,0.0016101,0.0084976,"R3H domain protein."]
["AT5G56740","HAG2",424.11,0.58544,0.15932,3.6746,{"v":0.000238,"d":"2.38E-04"},1.261E-3,"full_name=histone acetyltransferase of the GNAT family 2. histone acetyltransferase of the GNAT family 2. Encodes an enzyme with histone acetyltransferase activity. Histone H4 is the primary substrate for the enzyme. Prior acetylation of lysine 12 of histone H4 reduces radioactive acetylation by HAG2. HAG2 acetylates histone H4 lysine 12.","AT4G26690","SHV3",193.12,0.80661,0.25603,3.1505,1.6298E-3,0.0085916,"full_name=SHAVEN 3. PLC-like phosphodiesterase family protein. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development."]
["AT3G20210","DELTA-VPE",238.8,-0.75245,0.20484,-3.6734,{"v":0.000239,"d":"2.39E-04"},0.0012658,"full_name=delta vacuolar processing enzyme. delta vacuolar processing enzyme. Encodes a vacuolar processing enzyme with caspase-1-like activity that is specifically expressed in inner integument of developing seeds. Mutants display abnormal seed coat development. It is speculated to be involved in cell death of limited cell layers, the purpose of which is to form a seed coat.","AT5G52050","DTX50",15.002,-2.9719,0.94388,-3.1486,0.0016403,0.0086398,"MATE efflux family protein."]
["AT1G78590","NADK3",268.14,-0.71477,0.19461,-3.6728,{"v":0.00024,"d":"2.40E-04"},1.268E-3,"full_name=NAD(H) kinase 3. NAD(H) kinase 3. Encodes a NADH kinase which can synthesize NADPH from NADH; also utilizes NAD+ as substrate although NADH is the preferred substrate.","AT5G57700",null,95.642,0.99743,0.31681,3.1483,0.0016421,0.0086398,"BNR/Asp-box repeat family protein."]
["AT1G05000","PFA-DSP1",141.84,-1.0339,0.28154,-3.6722,{"v":0.00024,"d":"2.40E-04"},0.0012697,"full_name=plant and fungi atypical dual-speci&#64257;city phosphatase 1. Phosphotyrosine protein phosphatases superfamily protein. Encodes an atypical dual-speci&#64257;city phosphatase.","AT2G35010","TO1",391.77,-0.53917,0.17126,-3.1482,1.6427E-3,0.0086398,"full_name=thioredoxin O1. thioredoxin O1."]
["AT1G75850","VPS35B",557.38,-0.51986,0.14169,-3.669,{"v":0.000244,"d":"2.44E-04"},0.0012838,"full_name=VPS35 homolog B. VPS35 homolog B.","AT5G11250","BURNOUT1",39.573,1.5212,0.48346,3.1464,1.6527E-3,0.0086766,"Disease resistance protein (TIR-NBS-LRR class)."]
["AT3G43980",null,412.65,0.61316,0.16714,3.6685,{"v":0.000244,"d":"2.44E-04"},0.0012853,"Ribosomal protein S14p/S29e family protein.","AT5G11310","SOAR1",146.76,-0.83087,0.26408,-3.1463,0.0016533,0.0086766,"Pentatricopeptide repeat (PPR) superfamily protein. altering expression of ABA-responsive genes, critical negative regulator of ABA signaling, downstream of ABAR/CHLH and upstream of ABI5, altering expression of ABI5, ubiquitously expressed with the highest expression level in seeds, ABA response in seed germination and post-germination growth, AT1G65800"]
["AT3G20935","CYP705A28",41.69,1.8073,0.49281,3.6674,{"v":0.000245,"d":"2.45E-04"},0.0012895,"full_name=cytochrome P450, family 705, subfamily A, polypeptide 28. cytochrome P450, family 705, subfamily A, polypeptide 28.","AT3G04080","APY1",264.26,0.63846,0.20305,3.1443,0.0016648,8.7297E-3,"full_name=apyrase 1. apyrase 1. Encodes an Golgi-localized integral membrane enzyme with nucleoside diphosphate activity that when mutated in combination with ATAPY2 causes a complete inhibition of pollen germination."]
["AT5G52910","ATIM",77.481,1.2955,0.35356,3.6642,{"v":0.000248,"d":"2.48E-04"},0.0013042,"full_name=TIMELESS. timeless family protein. homolog of Drosophila timeless","AT3G05200","ATL6",143.06,-0.82566,0.26275,-3.1424,1.6756E-3,0.0087742,"full_name=Arabidopsis toxicos en levadura 6. RING/U-box superfamily protein. Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6)."]
["AT2G04390","DS17",2288.8,0.33905,0.092572,3.6626,{"v":0.00025,"d":"2.50E-04"},0.0013117,"Ribosomal S17 family protein.","AT1G25480","ALMT4",98.558,0.97232,0.30963,3.1403,0.0016878,0.0088309,"aluminum activated malate transporter family protein."]
["AT2G06010","ORG4",551.75,-0.58058,0.15853,-3.6624,{"v":0.00025,"d":"2.50E-04"},1.3123E-3,"full_name=OBP3-responsive gene 4. OBP3-responsive protein 4 (ORG4). encodes a novel protein whose expression level is induced in lines overexpressing salicylic-acid (SA)-inducible Arabidopsis DNA binding with one finger (Dof) transcription factor, called OBF-binding protein 3.","AT3G51770","ETO1",337.2,0.55174,0.17579,3.1387,1.6968E-3,0.0088742,"full_name=ETHYLENE OVERPRODUCER 1. tetratricopeptide repeat (TPR)-containing protein. Encodes a negative regulator of 1-aminocyclopropane-1-carboxylic acid synthase5(ACS5), which catalyze the rate-limiting step in ethylene biosynthesis. ETO1 directly interacts with ACS5 and inhibits its enzyme activity and targets it for degradation via proteasome-dependent pathway. It also interacts with CUL3 (a component of ubiquitin ligase complexes). eto1 (and eto3) mutations elevate ethylene biosynthesis by affecting the posttranscriptional regulation of ACS"]
["AT4G23100","GSH1",2544.4,-0.37312,0.10198,-3.6588,{"v":0.000253,"d":"2.53E-04"},0.0013291,"full_name=glutamate-cysteine ligase. glutamate-cysteine ligase. Encodes the enzyme glutamate-cysteine ligase catalyzing the first, and rate-limiting, step of glutathione biosynthesis. Required for cell proliferation at the root tip. Involved in susceptibility to the bacterial pathogen Pseudomonas syringae. Mutants are phytoalexin defective.","AT2G36870","XTH32",21.618,2.0322,0.64783,3.137,1.707E-3,0.008919,"full_name=xyloglucan endotransglucosylase/hydrolase 32. xyloglucan endotransglucosylase/hydrolase 32. Encodes a xyloglucan endotransglycosylase/hydrolase."]
["AT1G03770","RING1B",424.56,-0.59565,0.16304,-3.6534,{"v":0.000259,"d":"2.59E-04"},0.0013554,"full_name=RING 1B. RING 1B. Encodes a nuclear localized protein with similarity to animal polycomb repressive core complex1 (PRC1) core component RING.Appears to function redundantly with ATRING1a, a close paralog. Both interact physically with CLF and LHP1 and appear to function together to repress class I KNOX gene expression.","AT5G38720","RRP7",307.32,-0.73877,0.23564,-3.1351,1.7177E-3,0.0089623,"ribosomal RNA-processing 7 protein."]
["AT2G42975",null,154.13,-0.93156,0.25512,-3.6515,{"v":2.61E-4,"d":"2.61E-04"},1.3645E-3,"myosin-G heavy chain-like protein.","AT3G05320","OFT1",27.351,-1.9552,0.62386,-3.134,0.0017244,0.00899,"O-fucosyltransferase family protein."]
["AT1G74690","IQD31",1153.2,-0.43284,0.1186,-3.6496,{"v":2.63E-4,"d":"2.63E-04"},0.0013739,"full_name=IQ-domain 31. IQ-domain 31. Encodes a microtubule-associated protein.","AT1G12845",null,213.71,-0.82611,0.26363,-3.1335,0.0017271,0.008999,"transmembrane protein."]
["AT3G53380","LECRK-VIII.1",173.14,-0.89426,0.24519,-3.6471,{"v":0.000265,"d":"2.65E-04"},0.0013853,"Concanavalin A-like lectin protein kinase family protein.","AT4G38932",null,247.89,0.79515,0.25396,3.131,0.0017424,0.0090661,"Natural antisense transcript overlaps with AT4G38930. Potential natural antisense gene, locus overlaps with AT4G38930 Natural antisense transcript overlaps with AT4G38930"]
["AT3G16990",null,735.11,-0.51144,0.14029,-3.6456,{"v":0.000267,"d":"2.67E-04"},1.392E-3,"heme oxygenase-like, multi-helical.","AT5G54470","BBX29",16.875,-3.2648,1.043,-3.1301,1.7473E-3,0.0090815,"full_name=B-box domain protein 29. B-box type zinc finger family protein."]
["AT3G12080","emb2738",1503.4,0.48096,0.13209,3.6411,{"v":0.000271,"d":"2.71E-04"},1.415E-3,"full_name=embryo defective 2738. GTP-binding family protein.","AT4G00930","CIP4.1",293.1,-0.61773,0.19743,-3.1288,1.7549E-3,0.0091112,"full_name=COP1-interacting protein 4.1. COP1-interacting protein 4.1. Encodes COP1-interacting protein CIP4.1."]
["AT1G58200","MSL3",684.46,-0.48465,0.13313,-3.6404,{"v":2.72E-4,"d":"2.72E-04"},0.0014182,"full_name=MSCS-like 3. MSCS-like 3. A member of MscS-like gene family, structurally very similar to MSL2, comprising of an N-terminal chloroplast transit peptide, five trans-membrane helices and a C-terminal cytoplasmic domain. Mutant plants showed abnormalities in the size and shape of plastids. MSL3-GFP was localized to discrete foci on the plastid envelope and co-localize with the plastid division protein AtMinE. MSL3 was capable of increasing the osmotic-shock survival of a mutant bacterial strain lacking MS-ion-channel activity.","AT1G74970","RPS9",1489.7,0.42582,0.13612,3.1283,1.7583E-3,0.0091231,"full_name=ribosomal protein S9. ribosomal protein S9. ribosomal protein S9, nuclear encoded component of the chloroplast ribosome"]
["AT1G78270","UGT85A4",185.54,-0.9136,0.25129,-3.6357,{"v":0.000277,"d":"2.77E-04"},0.001443,"full_name=UDP-glucosyl transferase 85A4. UDP-glucosyl transferase 85A4.","AT3G21140",null,299.69,-0.63861,0.20416,-3.1281,0.0017596,0.0091231,"Pyridoxamine 5'-phosphate oxidase family protein."]
["AT4G28840","TIE1",8.2495,-6.5382,1.7994,-3.6336,{"v":0.00028,"d":"2.80E-04"},1.4529E-3,"mediator of RNA polymerase II transcription subunit.","AT5G05440","PYL5",72.4,-1.1482,0.3673,-3.126,1.7721E-3,0.0091751,"full_name=PYRABACTIN RESISTANCE 1-LIKE 5. Polyketide cyclase/dehydrase and lipid transport superfamily protein. Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2."]
["AT3G12760",null,949.57,0.47776,0.13152,3.6326,{"v":2.81E-4,"d":"2.81E-04"},1.4575E-3,"defective in cullin neddylation protein.","AT2G31751",null,42.215,-1.6034,0.51321,-3.1242,0.0017827,0.0092225,"Natural antisense transcript overlaps with AT2G31750. Potential natural antisense gene, locus overlaps with AT2G31750 Natural antisense transcript overlaps with AT2G31750"]
["AT3G21700","SGP2",63.1,1.4089,0.38795,3.6317,{"v":0.000282,"d":"2.82E-04"},0.0014614,"Ras-related small GTP-binding family protein. Monomeric G protein. Expressed in root epidermal cells that are destined to become atrichoblasts. Also expressed during pollen development and in the pollen tube tip.","AT3G07510",null,151.05,0.79449,0.25457,3.121,1.8027E-3,0.0093206,"maternal effect embryo arrest protein."]
["AT3G59040","PPR287",699.17,0.49343,0.1361,3.6254,{"v":0.000289,"d":"2.89E-04"},0.0014955,"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT3G10840",null,91.871,1.0095,0.32372,3.1184,1.8184E-3,0.0093889,"alpha/beta-Hydrolases superfamily protein."]
["AT1G30200",null,353.87,-0.63686,0.17577,-3.6233,{"v":0.000291,"d":"2.91E-04"},0.0015059,"F-box family protein.","AT1G04200",null,231.65,0.65925,0.21151,3.1168,1.8281E-3,0.0094289,"dyggve-melchior-clausen syndrome protein."]
["AT4G00740","QUA3",774.06,-0.45446,0.12548,-3.6217,{"v":0.000293,"d":"2.93E-04"},0.0015136,"full_name=QUASIMODO 3. S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. Encodes a Golgi-localized type II membrane pectin methyltransferase regulating cell wall biosynthesis in suspension cells.","AT2G19170","SLP3",122.92,0.86943,0.27905,3.1157,0.0018351,0.0094547,"full_name=subtilisin-like serine protease 3. subtilisin-like serine protease 3. Encodes a novel subtilisin-like serine protease."]
["AT1G62750","SCO1",2047.2,0.35048,0.096788,3.6211,{"v":0.000293,"d":"2.93E-04"},0.0015163,"full_name=SNOWY COTYLEDON 1. Translation elongation factor EFG/EF2 protein. Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants.","AT2G46000",null,334.66,0.55076,0.17681,3.115,0.0018394,0.0094691,"LDL receptor wingless signaling/trafficking chaperone."]
["AT2G28120","OTU",46.131,-1.7905,0.4946,-3.6201,{"v":0.000294,"d":"2.94E-04"},1.5206E-3,"Major facilitator superfamily protein.","AT5G55850","NOI",420.92,-0.55958,0.17967,-3.1144,1.8429E-3,0.0094817,"RPM1-interacting protein 4 (RIN4) family protein. NOI protein"]
["AT2G47110","UBQ6",6218.5,0.2991,0.082635,3.6195,{"v":0.000295,"d":"2.95E-04"},0.0015234,"full_name=ubiquitin 6. ubiquitin 6. polyubiquitin gene","AT4G31550","WRKY11",447.4,-0.59324,0.1906,-3.1124,0.0018557,0.0095383,"full_name=WRKY DNA-binding protein 11. WRKY DNA-binding protein 11. member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae."]
["AT3G02400","FHA3",115.26,-1.0522,0.29114,-3.614,{"v":0.000302,"d":"3.02E-04"},0.0015537,"SMAD/FHA domain-containing protein.","AT1G20090","ROP2",158.85,0.82751,0.26612,3.1095,0.0018738,9.6171E-3,"full_name=RHO-related protein from plants 2. RHO-related protein from plants 2. Member of the Rho GTPase family. Functions to organize the microtubular cytoskeleton in combination with RIC1 and RIC4. These interactions affect pavement cell morphogenesis and pollen tube growth. ROP2 expression is stimulated by brassinosteroid treatment. Inhibit light-induced stomatal opening."]
["AT2G17220","Kin3",221.99,0.78055,0.21618,3.6107,{"v":0.000305,"d":"3.05E-04"},1.5727E-3,"full_name=kinase 3. Protein kinase superfamily protein. Encodes a putative serine/threonine-specific protein kinase kin3. Protein is N-myristoylated.","AT3G02830","ZFN1",399.43,0.51519,0.16579,3.1074,1.8873E-3,0.009681,"full_name=zinc finger protein 1. zinc finger protein 1. Encodes a zinc finger protein that binds to PORA mRNA in vivo and recruits the Pfr form of phytochrome to the 5&#8242;-UTR of PORA mRNA to regulate translation of the mRNA."]
["AT3G55340","PHIP1",324.6,0.64032,0.17745,3.6084,{"v":0.000308,"d":"3.08E-04"},0.0015851,"full_name=phragmoplastin interacting protein 1. phragmoplastin interacting protein 1. Plant-specific protein. Interacts with phragmoplastin, Rop1 and Rop2. Involved in cell plate formation.","AT5G24120","SIGE",50.797,-1.7215,0.55438,-3.1052,1.9015E-3,9.7459E-3,"full_name=sigma factor E. sigma factor E. Encodes a specialized sigma factor that functions in regulation of plastid genes and is responsible for the light-dependent transcription at the psbD LRP. Activation of SIG5 is dependent upon blue light and mediated by cryptochromes."]
["AT5G64370","BETA-UP",550.65,-0.54274,0.15049,-3.6064,{"v":3.1E-4,"d":"3.10E-04"},0.0015955,"full_name=beta-ureidopropionase. beta-ureidopropionase. PYD3 encodes a beta-ureidopropionase which, when expressed in E. coli, has been shown to convert beta-ureidopropionate into beta-alanine. It localizes to the cytosol and plays an important role in uracil degradation.","AT3G06840",null,11.932,3.0155,0.97157,3.1037,0.0019109,0.0097807,"hypothetical protein."]
["AT1G29800",null,168.57,-0.85421,0.23699,-3.6044,{"v":0.000313,"d":"3.13E-04"},1.606E-3,"RING/FYVE/PHD-type zinc finger family protein.","AT5G61380","TOC1",972.45,0.48459,0.15623,3.1018,0.0019235,9.8347E-3,"full_name=TIMING OF CAB EXPRESSION 1. CCT motif -containing response regulator protein. Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization."]
["AT1G80340","GA3OX2",53.454,2.2466,0.62332,3.6043,{"v":0.000313,"d":"3.13E-04"},0.0016062,"full_name=gibberellin 3-oxidase 2. gibberellin 3-oxidase 2. Encodes a protein with gibberellin 3 &#946;-hydroxylase activity. The protein was heterologously expressed in E. coli and shown to catalyze the hydroxylation of both GA9 and GA20.","AT3G63450",null,166.93,0.758,0.24439,3.1016,1.9249E-3,0.0098382,"RNA-binding (RRM/RBD/RNP motifs) family protein."]
["AT5G01530","LHCB4.1",1907.3,-0.40882,0.11349,-3.6023,{"v":0.000315,"d":"3.15E-04"},0.0016168,"full_name=light harvesting complex photosystem II. light harvesting complex photosystem II.","AT5G52580",null,451.96,-0.56928,0.18362,-3.1003,1.9334E-3,9.8718E-3,"RabGAP/TBC domain-containing protein."]
["AT1G74670","GASA6",417.27,-0.66065,0.18352,-3.6,{"v":0.000318,"d":"3.18E-04"},0.00163,"full_name=GA-stimulated Arabidopsis 6. Gibberellin-regulated family protein.","AT3G23700","SRRP1",683.85,0.44635,0.144,3.0996,0.0019377,0.0098856,"Nucleic acid-binding proteins superfamily."]
["AT5G02030","RPL",114.83,-1.0537,0.29295,-3.5967,{"v":0.000322,"d":"3.22E-04"},1.6478E-3,"full_name=REPLUMLESS. POX (plant homeobox) family protein. Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. Its localization to the nucleus is dependent on the coexpression of either STM or BP.","AT2G34357",null,860.97,-0.42457,0.13709,-3.0971,0.0019542,0.0099537,"ARM repeat superfamily protein."]
["AT4G36680","RPPR7",483.11,0.56311,0.15663,3.5953,{"v":0.000324,"d":"3.24E-04"},0.0016563,"Tetratricopeptide repeat (TPR)-like superfamily protein.","AT4G34380",null,12.385,-5.1541,1.6648,-3.096,0.0019617,0.0099868,"Transducin/WD40 repeat-like superfamily protein."]
["AT5G64330","NPH3",269,0.74176,0.20638,3.5942,{"v":0.000325,"d":"3.25E-04"},1.6615E-3,"full_name=NON-PHOTOTROPIC HYPOCOTYL 3. Phototropic-responsive NPH3 family protein. Involved in blue light response signaling pathway; interacts with the blue light photoreceptor NPH1. Null mutations abolish phototrophic responses of etiolated seedlings to low fluence blue light. Protein contains multiple protein-protein interaction domains."]
["AT4G36580","SBA4",239.87,0.73762,0.20544,3.5904,{"v":3.3E-4,"d":"3.30E-04"},1.684E-3,"AAA-type ATPase family protein."]
["AT1G15950","CCR1",994.77,-0.43156,0.12029,-3.5878,{"v":0.000334,"d":"3.34E-04"},1.6991E-3,"full_name=cinnamoyl coa reductase 1. cinnamoyl coa reductase 1. Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis."]
["AT5G57565",null,138.69,-1.4229,0.39686,-3.5854,0.00033654,1.714E-3,"Protein kinase superfamily protein."]
["AT2G15900","SNX4",497.15,-0.55806,0.15573,-3.5835,{"v":3.39E-4,"d":"3.39E-04"},1.7255E-3,"phox domain-containing protein."]
["AT3G12915",null,83.228,1.3751,0.38398,3.581,{"v":0.000342,"d":"3.42E-04"},1.7393E-3,"Ribosomal protein S5/Elongation factor G/III/V family protein."]
["AT1G35180",null,14.267,-4.3029,1.2023,-3.5789,{"v":0.000345,"d":"3.45E-04"},1.7519E-3,"TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein."]
["AT5G58440","SNX2a",431.63,-0.56529,0.15797,-3.5784,{"v":0.000346,"d":"3.46E-04"},0.0017547,"full_name=sorting nexin 2A. sorting nexin 2A."]
["AT1G14200","SNIPER1",107.55,1.0784,0.30171,3.5744,{"v":0.000351,"d":"3.51E-04"},1.779E-3,"RING/U-box superfamily protein."]
["AT5G24460",null,567.54,-0.52806,0.14789,-3.5706,{"v":0.000356,"d":"3.56E-04"},0.001803,"RING-H2 zinc finger protein."]
["AT4G13110",null,188.87,-0.84359,0.23633,-3.5695,{"v":0.000358,"d":"3.58E-04"},0.0018086,"BSD domain-containing protein."]
["AT4G02370",null,529.92,-0.53475,0.14981,-3.5695,{"v":0.000358,"d":"3.58E-04"},0.0018086,"pectinesterase (Protein of unknown function, DUF538)."]
["AT1G12910","ATAN11",444.05,-0.5915,0.16589,-3.5657,{"v":0.000363,"d":"3.63E-04"},0.0018329,"full_name=ANTHOCYANIN11. Transducin/WD40 repeat-like superfamily protein. Encodes LIGHT-REGULATED WD1 (LWD1), a clock proteins regulating circadian period length and photoperiodic flowering."]
["AT3G54690","SETH3",275.79,-0.71885,0.20178,-3.5626,{"v":0.000367,"d":"3.67E-04"},1.8525E-3,"Sugar isomerase (SIS) family protein."]
["AT2G43150","EXT21",64.404,-1.4831,0.41649,-3.5609,{"v":0.00037,"d":"3.70E-04"},0.0018623,"Proline-rich extensin-like family protein."]
["AT3G14110","FLU",1263.6,0.38927,0.10932,3.5608,{"v":0.00037,"d":"3.70E-04"},0.0018626,"full_name=FLUORESCENT IN BLUE LIGHT. Tetratricopeptide repeat (TPR)-like superfamily protein. Encodes a novel coiled-coil, TPR domain containing protein that is localized to the chloroplast membrane and is involved in chlorophyll biosynthesis. Mutants accumulate protochlorophyllide, an intermediate in the chlorophyll biosynthesis pathway, in dark and release singlet oxygen in plastids in a controlled and non-invasive manner upon a dark/light shift."]
["AT5G27470",null,1136.9,0.39009,0.10969,3.5562,{"v":0.000376,"d":"3.76E-04"},1.892E-3,"seryl-tRNA synthetase / serine-tRNA ligase."]
["AT5G01075","TWS1",91.474,-1.4869,0.41882,-3.5502,{"v":0.000385,"d":"3.85E-04"},0.0019347,"Glycosyl hydrolase family 35 protein."]
["AT3G14740",null,49.957,1.89,0.53292,3.5465,{"v":0.00039,"d":"3.90E-04"},1.9594E-3,"RING/FYVE/PHD zinc finger superfamily protein."]
["AT2G47690",null,343.62,0.61741,0.17412,3.5459,{"v":0.000391,"d":"3.91E-04"},0.0019638,"NADH-ubiquinone oxidoreductase-like protein."]
["AT4G20830","ATBBE19",617.93,-0.52352,0.14773,-3.5439,{"v":0.000394,"d":"3.94E-04"},0.0019767,"FAD-binding Berberine family protein."]
["AT3G12280","RBR1",903.66,0.50555,0.1427,3.5426,{"v":0.000396,"d":"3.96E-04"},0.0019844,"full_name=retinoblastoma-related 1. retinoblastoma-related 1. Encodes a retinoblastoma homologue RETINOBLASTOMA-RELATED protein (RBR or RBR1). RBR controls nuclear proliferation in the female gametophyte. Also required for correct differentiation of male gametophytic cell types. Regulates stem cell maintenance in Arabidopsis roots. Involved in the determination of cell cycle arrest in G1 phase after sucrose starvation. RBR1 is also involved in regulation of imprinted genes. Together with MSI1 it represses the expression of MET1. This in turn activates expression of the imprinted genes FIS2 and FWA. Functions as a positive regulator of the developmental switch from embryonic heterotrophic growth to autotrophic growth"]
["AT5G16400","TRXF2",304.98,-0.77471,0.21879,-3.5408,{"v":0.000399,"d":"3.99E-04"},0.0019944,"full_name=thioredoxin F2. thioredoxin F2. Encodes an f-type thioredoxin (Trx-f2) localized in chloroplast stroma."]
["AT1G07540","TRFL2",14.987,-4.2276,1.1941,-3.5403,{"v":0.0004,"d":"4.00E-04"},0.0019978,"full_name=TRF-like 2. TRF-like 2. Arabidopsis thaliana telomere-binding protein, putative (At1g07540)"]
["AT3G02290",null,193.89,-0.84575,0.23899,-3.5388,{"v":0.000402,"d":"4.02E-04"},0.0020074,"RING/U-box superfamily protein."]
["AT1G16515",null,89.5,-1.2229,0.3459,-3.5353,{"v":0.000407,"d":"4.07E-04"},2.0317E-3,"transmembrane protein."]
["AT5G62270","GCD1",898.69,0.42551,0.12054,3.5299,{"v":0.000416,"d":"4.16E-04"},0.0020716,"full_name=GAMETE CELL DEFECTIVE 1. ribosomal protein L20."]
["AT3G20500","PAP18",1442.3,-0.39077,0.11073,-3.5291,{"v":4.17E-4,"d":"4.17E-04"},0.0020768,"full_name=purple acid phosphatase 18. purple acid phosphatase 18."]
["AT2G15490","UGT73B4",204.27,0.9349,0.26504,3.5274,{"v":0.00042,"d":"4.20E-04"},0.0020885,"full_name=UDP-glycosyltransferase 73B4. UDP-glycosyltransferase 73B4."]
["AT3G56130","BLP3",489.65,-0.54074,0.15337,-3.5257,{"v":0.000422,"d":"4.22E-04"},0.0021,"biotin/lipoyl attachment domain-containing protein."]
["AT1G36070",null,269.9,-0.84458,0.23971,-3.5234,{"v":4.26E-4,"d":"4.26E-04"},2.1151E-3,"Transducin/WD40 repeat-like superfamily protein."]
["AT5G27460",null,154.29,-0.94495,0.26821,-3.5231,{"v":0.000427,"d":"4.27E-04"},0.0021163,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT1G28190",null,16.557,3.9036,1.1084,3.5218,{"v":0.000429,"d":"4.29E-04"},2.1248E-3,"hypothetical protein."]
["AT1G33780",null,427.89,-0.66286,0.18837,-3.5189,{"v":0.000433,"d":"4.33E-04"},0.0021458,"electron transporter, putative (DUF179)."]
["AT3G11800",null,731.95,-0.4654,0.13236,-3.5162,{"v":0.000438,"d":"4.38E-04"},0.002165,"Expp1 protein."]
["AT5G38690","DDR1",197.21,0.77623,0.2208,3.5156,{"v":0.000439,"d":"4.39E-04"},0.0021699,"Zinc-finger domain of monoamine-oxidase A repressor R1 protein."]
["AT2G38820",null,443.25,-0.65566,0.18656,-3.5144,{"v":0.000441,"d":"4.41E-04"},0.0021778,"DNA-directed RNA polymerase subunit beta-beta protein, putative (DUF506)."]
["AT2G43410","FPA",456.92,0.61809,0.17628,3.5063,{"v":0.000454,"d":"4.54E-04"},0.002242,"RNA binding protein. FPA is a gene that regulates flowering time in Arabidopsis via a pathway that is independent of daylength (the autonomous pathway). Mutations in FPA result in extremely delayed flowering. Double mutants with FCA have reduced fertility and single/double mutants have defects in siRNA mediated chromatin silencing."]
["AT5G46230",null,136.99,-1.0425,0.29733,-3.506,{"v":4.55E-4,"d":"4.55E-04"},0.0022427,"hypothetical protein (Protein of unknown function, DUF538)."]
["AT1G73940",null,726.76,0.4815,0.1374,3.5045,{"v":0.000458,"d":"4.58E-04"},0.0022547,"tumor necrosis factor receptor family protein."]
["AT2G13610","ABCG5",273.67,-0.75556,0.21574,-3.5022,{"v":0.000462,"d":"4.62E-04"},2.271E-3,"full_name=ATP-binding cassette G5. ABC-2 type transporter family protein."]
["AT1G26620",null,226.39,-0.76206,0.21766,-3.5011,{"v":0.000463,"d":"4.63E-04"},2.2778E-3,"T-box transcription factor, putative (DUF863)."]
["AT1G29880",null,1586.2,0.3568,0.10193,3.5004,{"v":0.000465,"d":"4.65E-04"},0.0022822,"glycyl-tRNA synthetase / glycine-tRNA ligase."]
["AT4G37460","SRFR1",942.14,-0.41957,0.1199,-3.4994,{"v":4.66E-4,"d":"4.66E-04"},2.2902E-3,"full_name=SUPPRESSOR OF RPS4-RLD 1. Tetratricopeptide repeat (TPR)-like superfamily protein. Encodes a tetratricopeptide repeat domain containing protein that shows sequence similarity to those of transcriptional repressors in other organisms. Involved in mediating effector-triggered immunity."]
["AT4G00220","JLO",57.567,-1.657,0.47369,-3.498,{"v":0.000469,"d":"4.69E-04"},0.0022995,"full_name=JAGGED LATERAL ORGANS. Lateral organ boundaries (LOB) domain family protein. Encodes a protein containing a LOB domain that is expressed in embryos, flower primordium and lateral floral organ boundaries. Overexpression is correlated with activation of STM and KNAT1 and down regulation of PIN1 and reduced auxin transport levels. Ectopic expression in plants results in premature termination of the shoot apical meristem and small, lobed leaves. A maternally expressed imprinted gene."]
["AT4G08900","ARGAH1",582.54,0.49458,0.14143,3.497,{"v":0.00047,"d":"4.70E-04"},0.0023049,"full_name=arginine amidohydrolase 1. arginase. Encodes an arginase, likely to be involved in polyamine biosynthesis in pollen."]
["AT1G18150","ATMPK8",299.91,0.71637,0.20502,3.4941,{"v":0.000476,"d":"4.76E-04"},0.0023286,"Protein kinase superfamily protein. Encodes mitogen-activated protein kinase 8 (MPK8). MPK8 connects protein phosphorylation, Ca2+, and ROS in the wound-signaling pathway."]
["AT3G20430",null,273.45,0.67133,0.1922,3.4929,{"v":0.000478,"d":"4.78E-04"},0.0023375,"phosphorylated adapter RNA export-like protein."]
["AT4G30220","RUXF",779.68,0.47036,0.13481,3.4891,{"v":0.000485,"d":"4.85E-04"},0.0023672,"full_name=small nuclear ribonucleoprotein F. small nuclear ribonucleoprotein F."]
["AT3G61380","TRM14",48.528,-1.6057,0.46028,-3.4886,{"v":4.86E-4,"d":"4.86E-04"},0.0023703,"full_name=TON1 Recruiting Motif 14. Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein."]
["AT1G31290","AGO3",32.575,-2.1638,0.6204,-3.4877,{"v":0.000487,"d":"4.87E-04"},0.0023773,"full_name=ARGONAUTE 3. ARGONAUTE 3."]
["AT2G32180","PTAC18",294.3,0.67403,0.19335,3.4861,{"v":0.00049,"d":"4.90E-04"},2.3896E-3,"full_name=plastid transcriptionally active 18. plastid transcriptionally active 18."]
["AT3G26780","MEF14",482.85,0.52449,0.15054,3.4841,{"v":0.000494,"d":"4.94E-04"},0.0024046,"full_name=mitochondrial editing factor 14. Phosphoglycerate mutase family protein. Encodes MEF14 (mitochondrial editing factor 14), a PPR (pentatricopeptide repeat proteins) protein required for RNA editing at site matR-1895 in mitochondria."]
["AT3G55460","SCL30",1003.4,0.40848,0.11729,3.4827,{"v":0.000496,"d":"4.96E-04"},2.415E-3,"full_name=SC35-like splicing factor 30. SC35-like splicing factor 30. encodes an SC35-like splicing factor that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926."]
["AT1G16240","SYP51",838.12,-0.4593,0.13197,-3.4803,{"v":0.000501,"d":"5.01E-04"},0.0024338,"full_name=syntaxin of plants 51. syntaxin of plants 51. Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed."]
["AT1G30960","ERA-2",156.65,0.85787,0.24666,3.4779,{"v":0.000505,"d":"5.05E-04"},0.0024542,"GTP-binding family protein."]
["AT3G16310",null,615.37,0.47688,0.13722,3.4752,{"v":0.00051,"d":"5.10E-04"},0.0024767,"mitotic phosphoprotein N' end (MPPN) family protein."]
["AT5G07820",null,173.52,0.88025,0.25357,3.4714,{"v":0.000518,"d":"5.18E-04"},0.0025085,"Plant calmodulin-binding protein-like protein."]
["AT5G37130",null,879.61,0.41619,0.12001,3.468,{"v":0.000524,"d":"5.24E-04"},0.0025386,"Protein prenylyltransferase superfamily protein."]
["AT1G45249","ABF2",443.63,0.55083,0.15888,3.4668,{"v":0.000527,"d":"5.27E-04"},0.0025489,"full_name=abscisic acid responsive elements-binding factor 2. abscisic acid responsive elements-binding factor 2. Leucine zipper transcription factor that binds to the abscisic acid (ABA)%E2%80%93responsive element (ABRE) motif in the promoter region of ABA-inducible genes. Enhances drought tolerance in vegetative tissues. Required for normal glucose response. Localized in the nucleus. Expressed constitutively in roots, leaf vascular tissues, and hydathodes or in all tissues under stress conditions. It's phosphorylated by a ABA-activated 42-KDa kinase. Overexpression of the phosphorylated active form of AREB1 expressed many ABA-inducible genes, such as RD29B, without ABA treatment."]
["AT3G58780","SHP1",96.152,-1.1558,0.33355,-3.4652,{"v":0.00053,"d":"5.30E-04"},0.0025621,"full_name=SHATTERPROOF 1. K-box region and MADS-box transcription factor family protein. One of two genes (SHP1 and SHP2) that are required for fruit dehiscence. The two genes control dehiscence zone differentiation and promote the lignification of adjacent cells."]
["AT5G06560","MYOB7",494.28,0.51569,0.14894,3.4624,{"v":0.000535,"d":"5.35E-04"},2.5861E-3,"myosin-binding protein (Protein of unknown function, DUF593)."]
["AT4G25120","SRS2",57.529,1.4129,0.40867,3.4574,{"v":0.000545,"d":"5.45E-04"},0.0026309,"full_name=SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2. P-loop containing nucleoside triphosphate hydrolases superfamily protein. Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase. The Arabidopsis SRS2 is a functional 3%E2%80%99- to 5%E2%80%99-helicase. Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing."]
["AT3G14130","HAOX1",686.44,-0.59531,0.1722,-3.457,{"v":0.000546,"d":"5.46E-04"},0.0026333,"Aldolase-type TIM barrel family protein."]
["AT1G13710","CYP78A5",104.17,-1.064,0.30795,-3.455,{"v":0.00055,"d":"5.50E-04"},0.0026516,"full_name=cytochrome P450, family 78, subfamily A, polypeptide 5. cytochrome P450, family 78, subfamily A, polypeptide 5. Encodes the cytochrome P450 CYP78A5 monooxygenase. Contributes to the generation of a growth-stimulating signal distinct from the classical phytohormones that prevents proliferation arrest, promoting organ growth."]
["AT5G48030","GFA2",587.31,0.57526,0.16666,3.4516,{"v":0.000557,"d":"5.57E-04"},0.002681,"full_name=gametophytic factor 2. gametophytic factor 2. encodes a mitochondrially targeted DNAJ protein involved in female gametophyte development."]
["AT4G09720","RABG3A",310.94,0.62659,0.18169,3.4486,{"v":0.000563,"d":"5.63E-04"},2.7085E-3,"full_name=RAB GTPase homolog G3A. RAB GTPase homolog G3A."]
["AT2G18570",null,3828.1,-0.36446,0.10569,-3.4484,{"v":0.000564,"d":"5.64E-04"},0.0027098,"UDP-Glycosyltransferase superfamily protein."]
["AT5G55200","MGE1",210.34,0.78037,0.22653,3.4449,{"v":5.71E-4,"d":"5.71E-04"},2.7426E-3,"full_name=mitochondrial GrpE 1. Co-chaperone GrpE family protein."]
["AT2G30930",null,103.56,-1.1119,0.3231,-3.4414,{"v":0.000579,"d":"5.79E-04"},0.002776,"hypothetical protein."]
["AT1G71015",null,7.5139,6.3061,1.8339,3.4386,{"v":0.000585,"d":"5.85E-04"},0.002802,"plastid movement impaired protein."]
["AT3G02780","IPP2",1646.3,0.34042,0.099009,3.4382,{"v":0.000586,"d":"5.86E-04"},0.0028033,"full_name=isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2. isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2. Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway."]
["AT5G04560","DME",678.88,-0.50302,0.1464,-3.4358,{"v":0.000591,"d":"5.91E-04"},0.0028255,"full_name=DEMETER. HhH-GPD base excision DNA repair family protein. Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele."]
["AT4G10760","MTA",564.23,0.48903,0.14243,3.4334,{"v":0.000596,"d":"5.96E-04"},0.0028488,"full_name=mRNAadenosine methylase. mRNAadenosine methylase."]
["AT1G10960","FD1",1301.7,-0.36527,0.1064,-3.433,{"v":0.000597,"d":"5.97E-04"},0.0028516,"full_name=ferredoxin 1. ferredoxin 1."]
["AT5G47750","D6PKL2",821.14,-0.45051,0.13128,-3.4318,{"v":0.0006,"d":"6.00E-04"},0.0028616,"full_name=D6 protein kinase like 2. D6 protein kinase like 2."]
["AT1G01680","PUB54",7.9722,6.3996,1.866,3.4296,{"v":0.000604,"d":"6.04E-04"},0.0028817,"full_name=plant U-box 54. plant U-box 54."]
["AT1G52980","AtNug2",2476.3,0.30714,0.089603,3.4278,{"v":0.000608,"d":"6.08E-04"},0.0028975,"full_name=nuclear/nucleolar GTPase 2. GTP-binding family protein. Encodes a GTPase that belongs to the subfamily of YlqF/YawG GTPases. Functions in Pre-60S ribosomal subunit maturation."]
["AT3G46450",null,757.48,-0.83209,0.24282,-3.4267,{"v":6.11E-4,"d":"6.11E-04"},0.0029065,"SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein."]
["AT3G07570",null,153.93,-0.85965,0.25095,-3.4256,{"v":0.000613,"d":"6.13E-04"},2.9172E-3,"Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein."]
["AT5G03860","MLS",50858,0.31779,0.092864,3.4221,{"v":0.000621,"d":"6.21E-04"},0.0029507,"full_name=malate synthase. malate synthase. Encodes a protein with malate synthase activity."]
["AT4G02890","UBQ14",2443.8,-0.51508,0.15061,-3.42,{"v":0.000626,"d":"6.26E-04"},2.9719E-3,"Ubiquitin family protein. Polyubiquitin gene containing 4 ubiquitin repeats."]
["AT4G30440","GAE1",3086.5,0.64508,0.18866,3.4193,{"v":0.000628,"d":"6.28E-04"},0.0029772,"full_name=UDP-D-glucuronate 4-epimerase 1. UDP-D-glucuronate 4-epimerase 1. UDP-D-glucuronate 4-epimerase"]
["AT4G37000","ACD2",586.23,-0.56674,0.16585,-3.4171,{"v":0.000633,"d":"6.33E-04"},0.0029997,"full_name=ACCELERATED CELL DEATH 2. accelerated cell death 2 (ACD2). Mutants have spontaneous spreading cell death lesions and constitutive activation of defenses in the absence of pathogen infection. Its product was shown to display red chlorophyll catabolite reductase (RCCR), which catalyzes one step in the breakdown of the porphyrin component of chlorophyll. The enzyme was further assessed to be a Type-1 (pFCC-1-producing) RCCR.Upon P. syringae infection, ACD2 localization shifts from being largely in chloroplasts to partitioning to chloroplasts, mitochondria, and to a small extent, cytosol. Overexpression of ACD2 delayed cell death and the replication of P. syringae."]
["AT2G40220","ABI4",765.28,-0.44953,0.13169,-3.4136,{"v":0.000641,"d":"6.41E-04"},3.0347E-3,"full_name=ABA INSENSITIVE 4. Integrase-type DNA-binding superfamily protein. Encodes a member of the DREB subfamily A-3 of ERF/AP2 transcription factor family (ABI4). The protein contains one AP2 domain. There is only one member in this family. Involved in abscisic acid (ABA) signal transduction, ABA-mediated glucose response, and hexokinase-dependent sugar responses. Acts downstream of GUN1 in retrograde signaling. Expressed most abundantly in developing siliques and to a lesser degree in seedlings."]
["AT1G50840","POLGAMMA2",567.75,0.48549,0.14233,3.4111,{"v":0.000647,"d":"6.47E-04"},3.0596E-3,"full_name=polymerase gamma 2. polymerase gamma 2. DNA Polymerase gamma2. Dual targeting to mitochondria and plastids due to alternative translation initiation."]
["AT3G58060","MTP8",2241.5,-0.34617,0.1015,-3.4106,{"v":0.000648,"d":"6.48E-04"},0.0030632,"Cation efflux family protein."]
["AT1G24320",null,10.607,6.8127,1.9993,3.4076,{"v":0.000655,"d":"6.55E-04"},0.0030941,"Six-hairpin glycosidases superfamily protein."]
["AT1G65380","CLV2",152.01,-0.89407,0.26247,-3.4063,{"v":0.000658,"d":"6.58E-04"},0.0031063,"full_name=clavata 2. Leucine-rich repeat (LRR) family protein. Receptor-like protein containing leucine-rich repeats. Regulates both meristem and organ development in Arabidopsis."]
["AT5G62560","PUB41",122.81,-0.97758,0.28726,-3.4031,{"v":0.000666,"d":"6.66E-04"},0.0031393,"RING/U-box superfamily protein with ARM repeat domain-containing protein."]
["AT2G35500","SKL2",289.02,0.6591,0.19386,3.3999,{"v":0.000674,"d":"6.74E-04"},0.0031738,"full_name=shikimate kinase-like 2. shikimate kinase like 2. Encodes a protein with some sequence similarity to shikimate kinases, but a truncated form of this protein (lacking a putative N-terminal chloroplast transit peptide) does not have shikimate kinase activity in vitro."]
["AT2G41810",null,12.653,4.5653,1.3431,3.3992,{"v":0.000676,"d":"6.76E-04"},0.0031808,"imidazolonepropionase (Protein of unknown function, DUF642)."]
["AT5G47870","RAD52-2",368.92,-0.61819,0.18193,-3.398,{"v":0.000679,"d":"6.79E-04"},0.0031918,"full_name=radiation sensitive 51-2. cobalt ion-binding protein."]
["AT1G55190","PRA7",400.64,-0.56597,0.16669,-3.3954,{"v":0.000685,"d":"6.85E-04"},0.0032186,"PRA1 (Prenylated rab acceptor) family protein."]
["AT3G04710","TPR10",379.86,0.57725,0.1702,3.3917,{"v":0.000695,"d":"6.95E-04"},0.0032585,"full_name=tetratricopeptide repeat 10. ankyrin repeat family protein. Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones."]
["AT2G05220",null,2788.8,0.30338,0.089516,3.3891,{"v":0.000701,"d":"7.01E-04"},0.0032868,"Ribosomal S17 family protein."]
["AT5G64530","XND1",44.544,-1.562,0.46099,-3.3884,{"v":0.000703,"d":"7.03E-04"},0.0032944,"full_name=xylem NAC domain 1. xylem NAC domain 1."]
["AT1G56190","CPGK2",770.29,-0.43629,0.12887,-3.3856,{"v":0.00071,"d":"7.10E-04"},0.0033242,"Phosphoglycerate kinase family protein."]
["AT3G12560","TRFL9",507.99,-0.54378,0.16068,-3.3842,{"v":0.000714,"d":"7.14E-04"},0.003337,"full_name=TRF-like 9. TRF-like 9. Encodes a telomeric DNA-binding protein."]
["AT4G38160","pde191",537.57,0.50067,0.14798,3.3834,{"v":0.000716,"d":"7.16E-04"},0.0033466,"full_name=pigment defective 191. Mitochondrial transcription termination factor family protein."]
["AT1G66350","RGL1",111.98,-0.98707,0.29195,-3.3809,{"v":0.000722,"d":"7.22E-04"},0.0033729,"full_name=RGA-like 1. RGA-like 1. Negative regulator of GA responses, member of GRAS family of transcription factors. Also belongs to the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. RGL1 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Involved in flower and fruit development."]
["AT1G27460","NPGR1",694.52,-0.46761,0.13838,-3.3791,{"v":7.27E-4,"d":"7.27E-04"},0.0033927,"full_name=no pollen germination related 1. no pollen germination related 1. encodes a calmodulin-binding protein that is expressed in pollen, suspension culture cells, flowers, and fruits."]
["AT1G07790","HTB1",319.01,0.62502,0.18534,3.3722,{"v":0.000746,"d":"7.46E-04"},0.0034739,"Histone superfamily protein. Encodes a histone 2B (H2B) protein."]
["AT1G08890",null,263.52,0.70565,0.20933,3.371,{"v":0.000749,"d":"7.49E-04"},0.0034863,"Major facilitator superfamily protein."]
["AT5G49830","EXO84B",483.24,-0.51728,0.15351,-3.3697,{"v":0.000753,"d":"7.53E-04"},3.5011E-3,"full_name=exocyst complex component 84B. exocyst complex component 84B. Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion."]
["AT5G63920","TOP3A",173.82,0.84616,0.25138,3.3661,{"v":0.000762,"d":"7.62E-04"},3.5442E-3,"full_name=topoisomerase 3alpha. topoisomerase 3alpha. Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates."]
["AT3G54640","TSA1",416.14,0.57601,0.17117,3.3651,{"v":0.000765,"d":"7.65E-04"},0.0035556,"full_name=tryptophan synthase alpha chain. tryptophan synthase alpha chain. Catalyzes the conversion of indole-3-glycerolphosphate to indole, the penultimate reaction in the biosynthesis of tryptophan. Functions as a heterocomplex with tryptophan synthase beta subunit (TSA2)."]
["AT1G79160",null,182.45,-0.77801,0.23129,-3.3638,{"v":0.000769,"d":"7.69E-04"},0.0035693,"filamentous hemagglutinin transporter."]
["AT3G57090","BIGYIN",516.02,0.52611,0.15646,3.3626,{"v":0.000772,"d":"7.72E-04"},0.0035811,"Tetratricopeptide repeat (TPR)-like superfamily protein. Encodes a protein with similarity to yeast FIS proteins. These membrane anchored proteins bind DRP proteins and function during organelle division. FIS1B is expressed ubiquitously and appears to be involved in peroxisome division."]
["AT5G17270",null,457.59,0.52066,0.15497,3.3598,{"v":0.00078,"d":"7.80E-04"},0.0036128,"Protein prenylyltransferase superfamily protein."]
["AT1G14840","MAP70-4",306.06,-0.63244,0.18842,-3.3565,{"v":0.000789,"d":"7.89E-04"},3.6527E-3,"full_name=microtubule-associated proteins 70-4. microtubule-associated proteins 70-4. Encodes a microtubule associated protein (MAP70-4). Expressed in all tissues."]
["AT4G39140",null,415.7,-0.56665,0.16883,-3.3564,{"v":0.00079,"d":"7.90E-04"},3.6527E-3,"RING/U-box superfamily protein."]
["AT1G58520","RXW8",32.163,1.856,0.55318,3.3551,{"v":0.000793,"d":"7.93E-04"},0.0036658,"GDSL-like lipase/acylhydrolase superfamily protein."]
["AT1G45332",null,642.95,0.45004,0.13417,3.3542,{"v":0.000796,"d":"7.96E-04"},0.0036753,"Translation elongation factor EFG/EF2 protein."]
["AT2G37410","TIM17-2",1933.3,0.32356,0.096472,3.354,{"v":0.000797,"d":"7.97E-04"},0.0036761,"full_name=translocase inner membrane subunit 17-2. translocase inner membrane subunit 17-2. Mitochondrial inner membrane translocase. Together with AtTIM17-1, TIM17-2 has a long C-terminal extension not present in other TIMs. The extension is located in the outer membrane and so TIM17-2 links the inner and outer mitochondrial membranes. The C-terminal region is essential for protein import into mitochondria via the general import pathway but is not necessary for import via the carrier pathway."]
["AT2G35190","NPSN11",102.85,1.0806,0.32252,3.3504,{"v":0.000807,"d":"8.07E-04"},0.0037209,"full_name=novel plant snare 11. Putative plant snare 11. plant-specific SNARE located in cell plate of dividing cells. cofractionates with the cytokinesis-specific syntaxin, KNOLLE, which is required for the formation of the cell plate."]
["AT1G34030",null,2688,0.31691,0.094633,3.3489,{"v":0.000811,"d":"8.11E-04"},3.7372E-3,"Ribosomal protein S13/S18 family."]
["AT5G55660",null,1483.6,-0.36068,0.10774,-3.3477,{"v":0.000815,"d":"8.15E-04"},3.7488E-3,"DEK domain-containing chromatin associated protein."]
["AT1G11185","SORF2",23.747,-2.2473,0.67188,-3.3448,{"v":0.000823,"d":"8.23E-04"},3.7843E-3,"other_RNA. Unknown gene"]
["AT5G56090","COX15",271.22,0.66971,0.20023,3.3446,{"v":0.000824,"d":"8.24E-04"},0.0037864,"full_name=cytochrome c oxidase 15. cytochrome c oxidase 15. Encodes a homolog of COX15. Microarray analysis show a 3.2 fold increase in transcription after treatment with rotenone, an electron transport chain inhibitor."]
["AT5G15740","RRT1",517.14,-1.7308,0.51792,-3.3419,{"v":0.000832,"d":"8.32E-04"},0.0038185,"O-fucosyltransferase family protein."]
["AT5G53550","YSL3",453.15,0.57985,0.17351,3.3418,{"v":0.000832,"d":"8.32E-04"},0.0038185,"full_name=YELLOW STRIPE like 3. YELLOW STRIPE like 3."]
["AT5G20230","BCB",29.278,1.9767,0.59222,3.3379,{"v":0.000844,"d":"8.44E-04"},0.0038675,"full_name=blue-copper-binding protein. blue-copper-binding protein. Al-stress-induced gene"]
["AT4G32330","WDL5",1031.2,-0.41869,0.12545,-3.3374,{"v":0.000846,"d":"8.46E-04"},0.0038727,"TPX2 (targeting protein for Xklp2) protein family."]
["AT5G07725",null,19.211,2.5323,0.75918,3.3355,{"v":0.000851,"d":"8.51E-04"},0.0038955]
["AT5G08750",null,399.18,-0.87189,0.26159,-3.3331,{"v":0.000859,"d":"8.59E-04"},0.0039261,"RING/FYVE/PHD zinc finger superfamily protein."]
["AT1G73980","TTM1",917.45,-0.59503,0.17859,-3.3319,{"v":0.000863,"d":"8.63E-04"},0.0039383,"Phosphoribulokinase / Uridine kinase family."]
["AT3G20240",null,267.46,0.6655,0.19992,3.3288,{"v":0.000872,"d":"8.72E-04"},0.0039792,"Mitochondrial substrate carrier family protein."]
["AT3G60770",null,4991.2,0.26766,0.080427,3.3281,{"v":0.000875,"d":"8.75E-04"},3.9879E-3,"Ribosomal protein S13/S15."]
["AT1G05730",null,62.785,1.3945,0.41916,3.327,{"v":0.000878,"d":"8.78E-04"},0.0040004,"FAM136A-like protein (DUF842)."]
["AT5G12140","CYS1",1183.5,0.37555,0.11303,3.3225,{"v":8.92E-4,"d":"8.92E-04"},0.004059,"full_name=cystatin-1. cystatin-1. Encodes a cystatin."]
["AT5G55140",null,474.19,0.50003,0.15053,3.3218,{"v":0.000894,"d":"8.94E-04"},0.004068,"ribosomal protein L30 family protein."]
["AT1G20010","TUB5",280.35,0.71361,0.21488,3.321,{"v":0.000897,"d":"8.97E-04"},4.0764E-3,"full_name=tubulin beta-5 chain. tubulin beta-5 chain. beta tubulin"]
["AT2G17020",null,268.96,0.63916,0.19277,3.3157,{"v":0.000914,"d":"9.14E-04"},0.0041492,"F-box/RNI-like superfamily protein."]
["AT2G37560","ORC2",39.275,1.6394,0.49453,3.3151,{"v":0.000916,"d":"9.16E-04"},0.004154,"full_name=origin recognition complex second largest subunit 2. origin recognition complex second largest subunit 2. Origin Recognition Complex subunit 2. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts strongly with all ORC subunits."]
["AT4G28490","HAE",38.628,-1.6768,0.50602,-3.3137,{"v":0.000921,"d":"9.21E-04"},4.1725E-3,"full_name=HAESA. Leucine-rich receptor-like protein kinase family protein. Member of Receptor kinase-like protein family. Controls the separation step of floral organ abscission."]
["AT3G44290","NAC060",545.99,-0.51691,0.15601,-3.3134,{"v":0.000922,"d":"9.22E-04"},4.1744E-3,"full_name=NAC domain containing protein 60. NAC domain containing protein 60."]
["AT3G23560","ALF5",469.46,-0.52748,0.1593,-3.3112,{"v":0.000929,"d":"9.29E-04"},0.0042038,"full_name=ABERRANT LATERAL ROOT FORMATION 5. MATE efflux family protein. Member of the multidrug and toxic compound extrusion (MATE) family, protects roots from inhibitory compounds."]
["AT5G16050","GRF5",1454,0.50815,0.1535,3.3103,{"v":0.000932,"d":"9.32E-04"},0.0042148,"full_name=general regulatory factor 5. general regulatory factor 5. Encodes GF14 upsilon chain, a 14-3-3 gene family member."]
["AT1G54730",null,488.78,-0.65557,0.19811,-3.309,{"v":0.000936,"d":"9.36E-04"},0.0042311,"Major facilitator superfamily protein."]
["AT2G32880",null,55.842,-1.4033,0.42427,-3.3075,{"v":9.41E-4,"d":"9.41E-04"},0.0042494,"TRAF-like family protein."]
["AT2G06005","FIP1",254.34,-0.67331,0.20367,-3.306,{"v":0.000947,"d":"9.47E-04"},4.2689E-3,"full_name=FRIGIDA interacting protein 1. FRIGIDA interacting protein 1. Encodes one of the FRI interacting proteins: FRIGIDA INTERACTING PROTEIN 1 (FIP1)/At2g06005, FIP2/ At4g17060. FRI (At4G00650) is a major determinant of natural variation in Arabidopsis flowering time."]
["AT3G02690",null,358.39,-0.59177,0.17907,-3.3046,{"v":0.000951,"d":"9.51E-04"},0.0042859,"nodulin MtN21 /EamA-like transporter family protein. Nucleotide/sugar transporter family protein"]
["AT4G30210","ATR2",1157.7,-0.37649,0.11396,-3.3037,{"v":0.000954,"d":"9.54E-04"},0.0042986,"full_name=P450 reductase 2. P450 reductase 2. Encodes NADPH-cytochrome P450 reductase that catalyzes the first oxidative step of the phenylpropanoid general pathway."]
["AT4G10430",null,637.99,-0.56918,0.17245,-3.3006,{"v":0.000965,"d":"9.65E-04"},0.00434,"TMPIT-like protein."]
["AT3G63050",null,37.776,-1.7872,0.54168,-3.2994,{"v":0.000969,"d":"9.69E-04"},0.0043549,"hypothetical protein."]
["AT4G22220","ISU1",2604.1,0.32447,0.098354,3.299,{"v":0.00097,"d":"9.70E-04"},0.0043591,"SufE/NifU family protein. Encodes a mitochondrial protein similar to E.coli IscU. In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein."]
["AT3G56750",null,646.76,-0.4576,0.13895,-3.2933,{"v":0.00099,"d":"9.90E-04"},0.0044463,"plant/protein."]
["AT1G71696","SOL1",125.28,0.94776,0.28801,3.2907,{"v":0.000999,"d":"9.99E-04"},0.0044816,"full_name=SUPPRESSOR OF LLP1 1. carboxypeptidase D. Encodes a Putative Zn2+ carboxypeptidase, 4 splice variants have been identified but not characterized for different functions and/or expression patterns.SOL1 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol1 partially suppresses the short root phenotype caused by CLE19 overexpression."]
["AT3G30841",null,292.45,-0.60693,0.18455,-3.2887,0.0010066,0.0045097,"Cofactor-independent phosphoglycerate mutase."]
["AT1G30240",null,276.92,0.63548,0.19349,3.2842,1.0226E-3,0.0045769,"proline-, glutamic acid/leucine-rich protein."]
["AT2G32450",null,210.43,-0.70535,0.21482,-3.2834,1.0256E-3,0.0045896,"Calcium-binding tetratricopeptide family protein."]
["AT1G15510","ECB2",214.05,0.71726,0.21868,3.2799,0.0010384,4.64E-3,"full_name=EARLY CHLOROPLAST BIOGENESIS2. Tetratricopeptide repeat (TPR)-like superfamily protein. Encodes a pentatricopeptide repeat protein required for chloroplast transcript accD RNA editing and early chloroplast biogenesis."]
["AT5G16980",null,651.37,-0.43654,0.13312,-3.2792,0.0010408,0.0046498,"Zinc-binding dehydrogenase family protein."]
["AT1G23400","CAF2",636.51,0.45937,0.1403,3.2743,1.0593E-3,0.0047258,"RNA-binding CRS1 / YhbY (CRM) domain-containing protein. Promotes the splicing of chloroplast group II introns."]
["AT2G23390",null,381.29,0.55761,0.17037,3.273,1.0642E-3,0.0047451,"acyl-CoA."]
["AT5G43760","KCS20",220.88,0.74985,0.22928,3.2704,0.001074,0.0047854,"full_name=3-ketoacyl-CoA synthase 20. 3-ketoacyl-CoA synthase 20. Encodes KCS20, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids)."]
["AT5G50970",null,127.85,0.88855,0.27183,3.2688,0.0010801,0.004808,"transducin family protein / WD-40 repeat family protein."]
["AT5G03430",null,501.28,0.49264,0.15082,3.2663,1.0895E-3,0.0048444,"phosphoadenosine phosphosulfate (PAPS) reductase family protein."]
["AT1G48450",null,887.5,0.39973,0.1224,3.2659,1.0911E-3,0.0048479,"alanine-tRNA ligase, putative (DUF760)."]
["AT3G48090","EDS1",12.89,3.9769,1.2178,3.2657,1.0919E-3,4.8493E-3,"full_name=enhanced disease susceptibility 1. alpha/beta-Hydrolases superfamily protein. Component of R gene-mediated disease resistance in Arabidopsis thaliana with homology to eukaryotic lipases."]
["AT3G26930",null,7.0091,6.2018,1.8999,3.2643,1.0972E-3,4.8696E-3,"Protein with RNI-like/FBD-like domain."]
["AT5G39550","VIM3",78.096,1.1931,0.36572,3.2623,1.1053E-3,0.0048985,"full_name=VARIANT IN METHYLATION 3. Zinc finger (C3HC4-type RING finger) family protein. Encodes the VIM3/ORTH1 protein that is similar to VIM1. This protein has an N-terminal PHD domain and two RING domains surrounding an SRA domain. The protein has been shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the former. This protein functions as an E3 ubiquitin ligase in vitro with members of the UBC8 family E2s. Either of the two RING domains present in the protein can promote ubiquitylation in vitro, but, not the PHD domain. Over-expression of ORTH1/VIM3 leads to decreased levels of FWA methylation, increased levels of FWA transcripts, and delayed flowering. Cen180 repeats are also hypomethylated in plants overexpressing this protein."]
["AT5G64280","DiT2.2",448.67,-0.53523,0.16409,-3.2617,0.0011073,0.004905,"full_name=dicarboxylate transporter 2.2. dicarboxylate transporter 2.2."]
["AT4G19100","PAM68",240.93,0.69015,0.21172,3.2598,0.001115,0.0049356,"full_name=photosynthesis affected mutant 68. PAM68-like protein (DUF3464)."]
["AT5G60620","GPAT9",663.16,-0.43404,0.13324,-3.2575,0.0011239,0.0049704,"full_name=glycerol-3-phosphate acyltransferase 9. glycerol-3-phosphate acyltransferase 9. Glycerol-3-phosphate acyltransferase localized to the ER. Similar to mammalian cells involved in storage oil formation."]
["AT3G02370",null,56.298,1.3714,0.42132,3.2549,0.0011342,5.0101E-3,"tRNA-splicing endonuclease subunit."]
["AT3G18240",null,444.59,0.5343,0.16424,3.2532,0.001141,0.0050367,"Ribosomal protein S24/S35."]
["AT2G43590",null,165.84,0.89022,0.27367,3.2529,1.1423E-3,0.0050402,"Chitinase family protein."]
["AT2G42210","OEP16-3",1218.5,0.35577,0.1094,3.252,1.1459E-3,5.0523E-3,"Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein. Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family."]
["AT3G55090","ABCG16",28.266,-2.0782,0.63939,-3.2502,1.1531E-3,0.0050806,"full_name=ATP-binding cassette G16. ABC-2 type transporter family protein. Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16)."]
["AT2G45440","DHDPS2",1459.2,0.39143,0.12052,3.2479,0.0011625,0.0051185,"full_name=dihydrodipicolinate synthase. dihydrodipicolinate synthase. Encodes a protein that likely has dihydropicolinate synthase activity based on its mutant phenotype of decreased lysine levels and increased aspartate levels. The mutant also has increased levels of threonine. The enzyme is predicted to localize to the chloroplast."]
["AT3G05655",null,13.334,3.2213,0.99223,3.2466,1.1681E-3,0.0051369]
["AT1G23560",null,24.254,-2.2609,0.69665,-3.2454,0.0011728,0.0051532,"OBP32pep, putative (DUF220)."]
["AT5G17710","EMB1241",828.65,0.67032,0.20664,3.2439,0.0011789,0.0051748,"full_name=embryo defective 1241. Co-chaperone GrpE family protein."]
["AT4G35630","PSAT",804.55,0.4656,0.14361,3.242,0.0011869,0.0052088,"full_name=phosphoserine aminotransferase. phosphoserine aminotransferase. Encodes a phosphoserine aminotransferase which is involved in serine biosynthesis in the chloroplast which operates via the phosphorylated pathway."]
["AT2G18876",null,80.547,1.2574,0.38832,3.2382,0.001203,0.0052745,"Afadin/alpha-actinin-binding protein. Encodes a microtubule-associated protein."]
["AT5G61670","ATOR",262.71,-0.64093,0.19812,-3.2351,0.0012161,5.326E-3,"orange protein. Encodes a close homolog of the Cauliflower OR (Orange) protein. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons."]
["AT3G04360",null,22.342,-2.175,0.67238,-3.2348,0.0012173,0.0053286,"Calcium-dependent lipid-binding (CaLB domain) family protein."]
["AT5G57110","ACA8",1577.7,-0.34793,0.10759,-3.2337,0.0012218,5.3447E-3,"full_name=autoinhibited Ca2+ -ATPase, isoform 8. autoinhibited Ca2+ -ATPase, isoform 8. Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane."]
["AT4G26690","SHV3",240.72,-0.69571,0.2153,-3.2313,1.2324E-3,0.0053849,"full_name=SHAVEN 3. PLC-like phosphodiesterase family protein. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development."]
["AT2G24230",null,63.699,-1.6144,0.49979,-3.2302,1.2369E-3,0.0053993,"Leucine-rich repeat protein kinase family protein."]
["AT3G14050","RSH2",386.42,0.61008,0.18902,3.2276,1.2484E-3,0.0054444,"full_name=RELA/SPOT homolog 2. RELA/SPOT homolog 2."]
["AT2G40660",null,871.26,0.40069,0.12416,3.2273,0.0012498,0.0054495,"Nucleic acid-binding, OB-fold-like protein."]
["AT5G52840",null,1664.6,0.32265,0.10008,3.2239,1.2645E-3,0.0055084,"NADH-ubiquinone oxidoreductase-like protein."]
["AT4G24820",null,2034.4,0.30421,0.094459,3.2205,1.2795E-3,0.0055673,"26S proteasome regulatory subunit Rpn7."]
["AT1G71760",null,6.7335,6.1443,1.9085,3.2194,0.0012846,0.0055873,"hypothetical protein."]
["AT3G58430",null,49.79,1.4373,0.4468,3.2169,0.001296,0.0056314,"MATH domain/coiled-coil protein."]
["AT4G33130",null,95.429,-1.0166,0.31642,-3.2129,1.3142E-3,0.0057065,"rho GTPase-activating protein."]
["AT1G68050","FKF1",708.33,0.47942,0.14929,3.2114,0.0013209,0.005729,"full_name=flavin-binding, kelch repeat, f box 1. flavin-binding, kelch repeat, f box 1. Encodes FKF1, a flavin-binding kelch repeat F box protein, is clock-controlled, regulates transition to flowering. Forms a complex with GI on the CO promoter to regulate CO expression."]
["AT2G45570","CYP76C2",6.9985,6.2126,1.9363,3.2085,0.0013344,5.7824E-3,"full_name=cytochrome P450, family 76, subfamily C, polypeptide 2. cytochrome P450, family 76, subfamily C, polypeptide 2. member of CYP76C"]
["AT2G35620","FEI2",266.86,-0.68142,0.21248,-3.207,0.0013413,5.8084E-3,"full_name=FEI 2. Leucine-rich repeat protein kinase family protein. Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots."]
["AT4G34419",null,671.32,0.44035,0.13735,3.2061,0.0013454,0.0058232,"hypothetical protein."]
["AT1G61110","NAC025",18.504,-2.4733,0.77167,-3.2051,0.0013501,0.0058396,"full_name=NAC domain containing protein 25. NAC domain containing protein 25."]
["AT5G55930","OPT1",43.783,-1.4831,0.46301,-3.2032,1.3591E-3,0.0058704,"full_name=oligopeptide transporter 1. oligopeptide transporter 1. oligopeptide transporter"]
["AT5G12370","SEC10",1087,-0.4556,0.14229,-3.2019,0.0013654,0.0058952,"full_name=exocyst complex component sec10. exocyst complex component sec10."]
["AT3G66658","ALDH22A1",287.05,-0.61264,0.19145,-3.2,1.3744E-3,0.0059297,"full_name=aldehyde dehydrogenase 22A1. aldehyde dehydrogenase 22A1. Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures."]
["AT4G17470",null,14.352,3.6845,1.1534,3.1945,0.0014007,0.0060365,"alpha/beta-Hydrolases superfamily protein."]
["AT2G20820",null,1852.4,0.37837,0.11848,3.1936,1.4053E-3,0.0060509,"hypothetical protein."]
["AT5G17920","ATMS1",10306,0.2778,0.087032,3.1919,0.0014133,0.0060812,"full_name=methionine synthesis 1. Cobalamin-independent synthase family protein. Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide."]
["AT1G27880",null,55.897,1.3892,0.4355,3.1898,0.0014236,6.1227E-3,"DEAD/DEAH box RNA helicase family protein."]
["AT3G57630","EXAD",97.608,1.0358,0.32478,3.1891,0.0014274,0.0061346,"exostosin family protein."]
["AT1G09750",null,149.67,0.89971,0.28234,3.1866,0.0014393,0.0061777,"Eukaryotic aspartyl protease family protein."]
["AT4G12060","CLPT2",560.96,0.45704,0.1435,3.1849,0.0014481,0.0062123,"Double Clp-N motif protein."]
["AT3G05545",null,869.7,-0.42828,0.13456,-3.1829,1.4583E-3,0.006252,"RING/U-box superfamily protein."]
["AT1G04040",null,69.654,1.2543,0.39428,3.1811,1.467E-3,0.0062837,"HAD superfamily, subfamily IIIB acid phosphatase."]
["AT4G03180",null,513.33,0.47337,0.14891,3.179,0.0014779,0.0063246,"rRNA-processing protein."]
["AT4G30350","SMXL2",138.06,-0.84618,0.26625,-3.1781,1.4824E-3,0.0063422,"Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein. Encodes a member of an eight-gene family (SMAX1 and SMAX1-like) that has weak similarity to AtHSP101, a ClpB chaperonin required for thermotolerance."]
["AT4G21380","RK3",57.083,-1.4068,0.44296,-3.1759,1.4939E-3,6.3856E-3,"full_name=receptor kinase 3. receptor kinase 3. encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels."]
["AT3G19860","bHLH121",686.7,-0.42442,0.13382,-3.1715,0.0015167,0.0064758,"full_name=basic Helix-Loop-Helix 121. basic helix-loop-helix (bHLH) DNA-binding superfamily protein."]
["AT5G21990","TPR7",895.4,-0.40946,0.12919,-3.1696,1.5267E-3,0.0065135,"full_name=tetratricopeptide repeat 7. Tetratricopeptide repeat (TPR)-like superfamily protein. Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808). Functions as a chaperone receptor at the chloroplast outer envelope, mediating Hsp70-dependent protein targeting to chloroplasts. It has been localized to the ER membrane, interacts with the Sec translocon, and has a potential function in post-translational protein transport into the ER."]
["AT2G47520","ERF71",47.398,-1.769,0.55833,-3.1684,1.5329E-3,0.0065377,"full_name=ethylene response factor 71. Integrase-type DNA-binding superfamily protein. encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12."]
["AT3G50620",null,119.86,-1.138,0.35951,-3.1656,0.0015479,0.0065928,"P-loop containing nucleoside triphosphate hydrolases superfamily protein."]
["AT2G06925","PLA2-ALPHA",308.04,-0.6078,0.19221,-3.1621,0.0015664,0.0066669,"Phospholipase A2 family protein. Encodes a secretory phospholipase A2 enzyme, which specifically hydrolyzes the sn-2 position of phospholipids. The enzyme has a preference towards linoleoyl acyl chain over palmitoyl acyl chain. It also has a slight preference for phosphatidylcholine over phosphatidylethanolamine."]
["AT5G65070","MAF4",108.07,-0.95153,0.30115,-3.1597,0.0015794,0.0067165,"full_name=MADS AFFECTING FLOWERING 4. K-box region and MADS-box transcription factor family protein. Encodes MADS-box containing FLC paralog. Five splice variants have been identified but not characterized with respect to expression patterns and/or differing function. Overexpression of the gene in the Landsberg ecotype leads to a delay in flowering, transcript levels of MAF4 are reduced after a 6 week vernalization."]
["AT1G30330","ARF6",944.85,-0.40101,0.12693,-3.1593,0.0015817,0.0067247,"full_name=auxin response factor 6. auxin response factor 6. Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167."]
["AT1G50920","NOG1-1",3666.3,0.261,0.08264,3.1583,1.5868E-3,0.0067394,"Nucleolar GTP-binding protein."]
["AT4G21610","LOL2",279.14,0.70855,0.2245,3.1561,0.001599,0.0067845,"full_name=lsd one like 2. lsd one like 2. Contains the same novel zinc finger motif with LSD1, a negative regulator of cell death and defense response. Due to differential splicing, it encodes two different proteins, one of which contains an additional, putative DNA binding motif. Northern analysis demonstrated that LOL2 transcripts containing the additional DNA binding motif are predominantly upregulated after treatment with both virulent and avirulent Pseudomonas syringae pv maculicola strains."]
["AT5G15550","ATPEP2",793.89,0.39533,0.12533,3.1544,0.0016081,0.0068186,"Transducin/WD40 repeat-like superfamily protein."]
["AT3G01480","CYP38",564.59,0.46997,0.14901,3.1539,0.0016108,0.006827,"full_name=cyclophilin 38. cyclophilin 38. Encodes a chloroplast cyclophilin functioning in the assembly and maintenance of photosystem II (PSII) supercomplexes."]
["AT4G21570",null,1205.3,0.35023,0.11115,3.151,0.0016269,0.0068891,"organic solute transporter ostalpha protein (DUF300)."]
["AT3G14330","CREF3",312.34,0.58342,0.18519,3.1504,0.0016303,0.0069018,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT5G50960","NBP35",699.25,0.42063,0.13362,3.1479,0.0016444,0.0069601,"full_name=nucleotide binding protein 35. nucleotide binding protein 35. Highly similar to Saccharomyces cerevisiae NBP35, locus YGL091C. Cytosolic protein that homodimerizes and can assemble both 4Fe-4S - type and 2Fe-2S - type clusters on its amino terminal and carboxy therminal respectively. Null mutants are embryo lethal."]
["AT3G02220",null,899.69,0.38358,0.12186,3.1477,0.0016457,0.0069637,"small acidic-like protein."]
["AT1G75760",null,286.33,-0.62591,0.19887,-3.1474,0.0016472,0.0069687,"ER lumen protein retaining receptor family protein."]
["AT5G46410","SSP4",339.14,-0.54677,0.17377,-3.1465,1.6523E-3,6.9879E-3,"full_name=SCP1-like small phosphatase 4. SCP1-like small phosphatase 4. Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4)."]
["AT3G04630","WDL1",240.69,-0.65819,0.20918,-3.1465,0.0016525,6.9879E-3,"full_name=WVD2-like 1. WVD2-like 1. Member of a small gene family which have a KLEEK domain which may be involved in protein- protein interactions. Over expression of WDL1 results in abnormal root development."]
["AT3G13570","SCL30A",760.16,0.40088,0.12743,3.146,1.6553E-3,0.0069984,"full_name=SC35-like splicing factor 30A. SC35-like splicing factor 30A. encodes an SC35-like splicing factor of 30 kD that is localized to the nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926."]
["AT4G10060","GLUCOSYLCERAMIDASE",535.4,0.5187,0.16489,3.1458,1.6566E-3,7.0012E-3,"Beta-glucosidase, GBA2 type family protein."]
["AT5G24080",null,45.48,-1.4417,0.45829,-3.1457,1.6569E-3,7.0012E-3,"Protein kinase superfamily protein."]
["AT3G08690","UBC11",1055,-0.36698,0.11666,-3.1457,0.0016571,7.0012E-3,"full_name=ubiquitin-conjugating enzyme 11. ubiquitin-conjugating enzyme 11."]
["AT1G06700",null,1153.7,-0.36421,0.11581,-3.145,1.6611E-3,0.0070166,"Protein kinase superfamily protein."]
["AT3G56040","UGP3",284.52,-0.59299,0.18858,-3.1445,0.0016636,0.0070256,"full_name=UDP-glucose pyrophosphorylase 3. UDP-glucose pyrophosphorylase 3."]
["AT3G63530","BB",114.31,0.92658,0.29473,3.1438,0.0016675,0.0070395,"full_name=BIG BROTHER. RING/U-box superfamily protein. Encodes a novel E3 ubiquitin ligase that acts as a central negative regulator of Arabidopsis floral organ size. Organ size is limited by restricting the period of proliferative growth, rather than the rate of growth and appears to act in a novel pathway, independent of ANT and JAG. Both mRNA and protein are expressed in all actively growing regions of the plant and the vasculature and the protein is rapidly turned over by proteasome-mediated degradation."]
["AT3G11420",null,393.32,0.53336,0.16965,3.1438,1.6677E-3,0.0070395,"beta-1,3-N-acetylglucosaminyltransferase lunatic protein, putative (DUF604)."]
["AT5G06130","ATOR-LIKE",1142.9,0.41151,0.1309,3.1436,0.0016686,0.0070419,"chaperone protein dnaJ-like protein."]
["AT3G15790","MBD11",733.46,-0.40394,0.1285,-3.1434,1.67E-3,0.0070462,"full_name=methyl-CPG-binding domain 11. methyl-CPG-binding domain 11. Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins."]
["AT4G27820","BGLU9",158.24,0.76841,0.24446,3.1433,0.0016706,0.0070462,"full_name=beta glucosidase 9. beta glucosidase 9."]
["AT4G27380",null,600.62,0.43709,0.13906,3.1433,1.6707E-3,0.0070462,"hypothetical protein."]
["AT2G14220",null,89.494,-1.0119,0.32201,-3.1424,0.0016754,0.0070643,"transposable_element_gene."]
["AT1G67280","ATGLYI6",2413.1,0.29589,0.09417,3.142,1.6779E-3,0.007073,"Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein."]
["AT1G08610",null,210.86,0.68453,0.21789,3.1416,0.00168,0.0070791,"Pentatricopeptide repeat (PPR) superfamily protein."]
["AT4G20325",null,135.08,0.8258,0.26285,3.1416,0.0016801,0.0070791,"ribonuclease H2 subunit B."]
["AT1G67080","ABA4",242.05,0.68325,0.21754,3.1408,0.001685,0.0070985,"full_name=abscisic acid (ABA)-deficient 4. abscisic acid (aba)-deficient 4. Encodes a protein involved in the photoprotection of PSII. An aba4-1 mutant completely lacks neoxanthin,a component of the chromophore of the peripheral antenna system in PSII. ABA4 is required for neoxanthin biosynthesis, an intermediary step in abscisic acid biosynthesis, but no catalytic activity has been detected for the ABA4 protein."]
["AT4G33090","APM1",2110.3,-0.29399,0.09363,-3.1399,1.6902E-3,0.0071187,"full_name=aminopeptidase M1. aminopeptidase M1. encodes an aminopeptidase, a ortholog of mouse microsomal AP (EC 3.4.11.2)."]
["AT2G32487",null,29.516,-1.8586,0.59222,-3.1384,0.0016985,0.007152,"hypothetical protein."]
["AT5G64380",null,173.13,0.74626,0.23784,3.1376,0.0017035,0.0071708,"Inositol monophosphatase family protein."]
["AT1G61670",null,713.58,-0.46474,0.14812,-3.1375,1.704E-3,0.0071708,"Lung seven transmembrane receptor family protein."]
["AT1G09540","MYB61",28.877,-2.3224,0.74023,-3.1374,1.7043E-3,0.0071708,"full_name=myb domain protein 61. myb domain protein 61. Encodes putative transcription factor. Mutants lack of mucilage extrusion from the seeds during imbibition. Reduced quantities of mucilage are deposited during the development of the seed coat epidermis in myb61 mutants. Expressed in guard cells,loss of function mutations show an increase in stomatal pore opening suggesting a role in ABA independent regulation of stomatal pore size."]
["AT5G18930","BUD2",30.35,-1.7623,0.56171,-3.1374,0.0017045,0.0071708,"full_name=BUSHY AND DWARF 2. Adenosylmethionine decarboxylase family protein."]
["AT3G24500","MBF1C",114.8,0.93727,0.29878,3.137,1.7067E-3,0.0071788,"full_name=multiprotein bridging factor 1C. multiprotein bridging factor 1C. One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is specifically elevated in response to pathogen infection, salinity, drought, heat, hydrogen peroxide, and application of abscisic acid or salicylic acid. Constitutive expression enhances the tolerance of transgenic plants to various biotic and abiotic stresses."]
["AT5G41690",null,41.283,-1.5937,0.50816,-3.1362,0.0017114,7.1966E-3,"RNA-binding (RRM/RBD/RNP motifs) family protein."]
["AT3G25290",null,624.47,-0.44921,0.14326,-3.1356,1.7151E-3,0.0072106,"Auxin-responsive family protein."]
["AT1G55350","DEK1",787.69,-0.45616,0.14552,-3.1347,1.7204E-3,0.0072315,"full_name=DEFECTIVE KERNEL 1. calpain-type cysteine protease family. Similar to maize DEK1, a gene encoding a membrane protein of the calpain gene superfamily required for aleurone cell development in the endosperm of maize grains. A key component of the embryonic L1 cell-layer specification pathway. It localizes to membranes and undergoes intramolecular autolytic cleavage events that release the calpain domain into the cytoplasm."]
["AT5G20650","COPT5",824.75,-0.49674,0.15847,-3.1345,1.7212E-3,0.0072331,"full_name=copper transporter 5. copper transporter 5. Encodes COPT5, a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast. Plays an important role in the plant response to environmental copper scarcity, probably by remobilizing copper from prevacuolar vesicles, which could act as internal stores or recycling vesicles to provide the metal cofactor to key copper-dependent processes such as photosynthesis."]
["AT2G34430","LHB1B1",316.51,-0.75842,0.24204,-3.1335,0.0017276,0.0072582]
["AT3G05936",null,59.907,1.2418,0.39631,3.1334,0.0017279,0.0072582,"hypothetical protein."]
["AT2G31410",null,1463.8,0.32616,0.1041,3.1332,1.7288E-3,0.0072604,"coiled-coil protein."]
["AT5G41220","GSTT3",325.3,-0.60197,0.19214,-3.1329,0.001731,0.0072679,"full_name=glutathione S-transferase THETA 3. glutathione S-transferase THETA 3. Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002)."]
["AT4G22233",null,19.518,-2.294,0.73233,-3.1324,0.0017336,0.0072771,"Natural antisense transcript overlaps with AT4G22235. Potential natural antisense gene, locus overlaps with AT4G22235 Natural antisense transcript overlaps with AT4G22235"]
["AT2G32580",null,469.13,-0.47428,0.15141,-3.1324,0.001734,0.0072772,"transmembrane protein, putative (DUF1068)."]
["AT2G24945",null,50.177,1.4566,0.46502,3.1323,0.0017344,0.0072772,"transmembrane protein."]
["AT5G64070","PI-4KBETA1",850.69,-0.38567,0.12313,-3.1322,0.0017351,0.0072785,"full_name=phosphatidylinositol 4-OH kinase beta1. phosphatidylinositol 4-OH kinase beta1. Encodes a phosphatidylinositol 4-OH kinase, PI-4Kbeta1. Arabidopsis contains 12 PI-4Ks in three separate families: PI-4Kalphs, PI-4kbeta, and PI-4Kgamma. PI-4Kbeta1 is 83% identical to PI-4kbeta2 encoded by At5g09350. Interacts with the RabA4b GTPase. Important for polarized root hair growth as the loss of this gene and its close relative PI-4kbeta2, leads to the formation of abnormal root hairs."]
["AT3G23870","ENOR3L2",11.206,-3.942,1.2586,-3.1321,0.0017355,0.0072785,"magnesium transporter NIPA (DUF803)."]
["AT5G19320","RANGAP2",361.67,0.54571,0.17425,3.1317,0.0017378,0.0072868,"full_name=RAN GTPase activating protein 2. RAN GTPase activating protein 2. Encodes RAN GTPase activating protein 2. The protein is localized to the nuclear envelope during interphase."]
["AT3G01670","SEOa",58.647,-1.2422,0.39669,-3.1315,0.001739,0.0072903,"full_name=sieve element occlusion a. sieve element occlusion protein. Encodes a protein localized to phloem filaments that is required for phloem filament formation."]
["AT1G66410","CAM4",5083.1,-0.26838,0.085724,-3.1307,0.0017439,0.0073089,"full_name=calmodulin 4. calmodulin 4. encodes a calmodulin"]
["AT5G45750","RABA1c",219.88,0.75675,0.24177,3.13,0.0017482,0.0073256,"full_name=RAB GTPase homolog A1C. RAB GTPase homolog A1C."]
["AT1G75670",null,215.53,0.67347,0.21529,3.1283,0.0017585,0.0073661,"DNA-directed RNA polymerase."]
["AT2G24790","COL3",803.37,0.44861,0.14341,3.1282,1.7587E-3,0.0073661,"full_name=CONSTANS-like 3. CONSTANS-like 3. Positive regulator of photomorphogenesis that acts downstream of COP1 but can promote lateral root development independently of COP1 and also function as a daylength-sensitive regulator of shoot branching."]
["AT2G20710",null,88.308,1.0429,0.33359,3.1263,0.0017704,0.0074134,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT5G04440",null,670.56,0.42261,0.13519,3.126,1.7722E-3,0.0074194,"RAP release 2, galactose-binding-like domain protein, putative (DUF1997)."]
["AT1G49640",null,26.131,-1.9067,0.61003,-3.1256,0.0017746,0.0074263,"alpha/beta-Hydrolases superfamily protein."]
["AT1G68260","ALT3",190.46,-0.74207,0.23742,-3.1256,0.0017746,0.0074263,"Thioesterase superfamily protein."]
["AT5G59080",null,29.564,-1.786,0.57186,-3.1233,0.0017887,0.0074834,"hypothetical protein."]
["AT5G47090",null,565.49,-0.48604,0.15566,-3.1225,1.7932E-3,0.0075008,"coiled-coil protein."]
["AT2G19385",null,295.24,0.57549,0.18434,3.122,1.7963E-3,0.007512,"zinc ion binding protein."]
["AT3G04550","RAF1",1725.3,0.36348,0.11647,3.1209,1.8031E-3,0.0075389,"rubisco accumulation factor-like protein."]
["AT3G61620","RRP41",287.24,0.59035,0.18917,3.1207,1.804E-3,0.0075408,"3'-5'-exoribonuclease family protein. exonuclease RRP41 (RRP41)"]
["AT3G58040","SINAT2",306.13,-0.57481,0.18423,-3.1201,0.001808,0.007556,"full_name=seven in absentia of Arabidopsis 2. seven in absentia of Arabidopsis 2. Encodes a RING finger domain containing protein that interacts with AtRAP2.2."]
["AT4G38890",null,788.31,0.40589,0.1301,3.1199,0.0018091,0.0075589,"FMN-linked oxidoreductases superfamily protein."]
["AT5G40960",null,31.04,-2.0381,0.65336,-3.1194,0.0018121,0.0075697,"transmembrane protein, putative (DUF 3339)."]
["AT1G55900","TIM50",514.66,0.45858,0.14701,3.1193,0.0018126,0.0075703,"Haloacid dehalogenase-like hydrolase (HAD) superfamily protein. component of a translocase in the mitochondrial inner membrane"]
["AT2G26290","ARSK1",18.118,-2.3915,0.76708,-3.1177,1.8227E-3,0.0076087,"full_name=root-specific kinase 1. root-specific kinase 1."]
["AT4G24560","UBP16",572.23,-0.44751,0.14354,-3.1177,0.0018228,0.0076087,"full_name=ubiquitin-specific protease 16. ubiquitin-specific protease 16. Encodes a ubiquitin-specific protease. There is no evidence for a phenotype in ubp16-1 mutants, however, double mutant analysis with ubp15 mutants reveals a role for UBP16 in plant development and cell proliferation."]
["AT3G57530","CPK32",348.86,0.59759,0.19168,3.1176,1.823E-3,0.0076087,"full_name=calcium-dependent protein kinase 32. calcium-dependent protein kinase 32. Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro"]
["AT2G46450","CNGC12",668.32,-0.42433,0.13612,-3.1174,0.0018245,0.0076119,"full_name=cyclic nucleotide-gated channel 12. cyclic nucleotide-gated channel 12. Member of Cyclic nucleotide gated channel family.Positive regulator of resistance against avirulent fungal pathogen.Suppresses the phenotype conferred by cpr22 in a dosage-dependent manner."]
["AT5G24840","TRM8A",254.75,0.61762,0.19812,3.1174,1.8246E-3,0.0076119,"tRNA (guanine-N-7) methyltransferase."]
["AT5G57270",null,145.2,0.85806,0.27531,3.1168,1.8285E-3,0.0076256,"Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein."]
["AT2G31585",null,430.98,-0.6009,0.1928,-3.1167,1.8288E-3,0.0076256,"other_RNA. Unknown gene"]
["AT2G34570","MEE21",374.02,0.52788,0.16937,3.1167,1.8291E-3,0.0076256,"full_name=maternal effect embryo arrest 21. PIN domain-like family protein."]
["AT5G43320","ckl8",1086.1,-0.36762,0.11796,-3.1165,1.83E-3,0.0076277,"full_name=casein kinase I-like 8. casein kinase I-like 8."]
["AT1G53180",null,54.264,1.3643,0.43784,3.1159,0.0018336,0.0076409,"hypothetical protein."]
["AT1G67210","ZCCHC8B",87.142,1.0313,0.33101,3.1157,1.8353E-3,0.0076465,"Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein."]
["AT2G36610","HB22",5.9158,-6.0588,1.9447,-3.1155,1.8361E-3,7.6479E-3,"full_name=homeobox protein 22. homeobox protein 22. Encodes a homeodomain leucine zipper class I (HD-Zip I) protein."]
["AT3G62460",null,150.37,0.82801,0.26583,3.1148,0.0018409,0.0076665,"Putative endonuclease or glycosyl hydrolase."]
["AT4G21320","HSA32",289.09,-0.57919,0.18599,-3.1141,1.8452E-3,0.0076825,"full_name=HEAT-STRESS-ASSOCIATED 32. Aldolase-type TIM barrel family protein. Encodes heat-stress-associated 32-kD protein. Up-regulated by heat shock. Thermotolerance in a knockout mutant was compromised following a long recovery period (> 24 h) after acclimation heat shock treatment."]
["AT1G43700","VIP1",887.06,-0.37116,0.1192,-3.1137,0.0018478,0.0076918,"full_name=VIRE2-interacting protein 1. VIRE2-interacting protein 1. Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half. Involved in osmosensory response."]
["AT4G13860",null,5.9889,5.9805,1.9209,3.1133,1.8498E-3,0.0076984,"RNA-binding (RRM/RBD/RNP motifs) family protein."]
["AT3G55440","TPI",5694.7,-0.30013,0.096427,-3.1126,1.8548E-3,7.7164E-3,"full_name=triosephosphate isomerase. triosephosphate isomerase. Encodes triosephosphate isomerase."]
["AT1G15120",null,835.18,0.49879,0.16025,3.1125,0.001855,7.7164E-3,"Ubiquinol-cytochrome C reductase hinge protein."]
["AT1G04260","MPI7",298.03,-0.60848,0.19559,-3.111,0.0018643,0.0077538,"full_name=CAMV movement protein interacting protein 7. CAMV movement protein interacting protein 7. Encodes protein that interacts with CaMV movement protein. Colocalizes in the cytoplasm with the movement protein. Has similarity to mammalian proteins (such as the rat PRA1) which have been described as rab acceptors."]
["AT2G06255","ELF4-L3",68.263,-1.2384,0.39815,-3.1103,1.869E-3,0.0077712,"full_name=ELF4-like 3. ELF4-like 3."]
["AT5G13520",null,412.38,0.49863,0.16038,3.109,0.0018772,0.0078039,"peptidase M1 family protein."]
["AT2G34360",null,194.55,0.70556,0.22698,3.1084,1.8808E-3,0.0078169,"MATE efflux family protein."]
["AT2G41110","CAM2",180.71,0.76301,0.24548,3.1082,1.8821E-3,0.0078184,"full_name=calmodulin 2. calmodulin 2. Encodes a touch-inducible calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6."]
["AT5G23050","AAE17",670.05,0.41766,0.13438,3.1082,1.8824E-3,0.0078184,"full_name=acyl-activating enzyme 17. acyl-activating enzyme 17."]
["AT3G17090","PP2C.D2",995.92,-0.37345,0.12015,-3.1082,0.0018826,0.0078184,"Protein phosphatase 2C family protein."]
["AT1G17620",null,452.17,-0.49572,0.15949,-3.1081,1.8828E-3,0.0078184,"Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family."]
["AT1G61720","BAN",31.007,-1.7559,0.56526,-3.1064,0.0018941,0.0078635,"full_name=BANYULS. NAD(P)-binding Rossmann-fold superfamily protein. Negative regulator of flavonoid biosynthesis, mutants accumulate flavonoid pigments in their seed coat, putative oxidoreductase. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium."]
["AT1G72175",null,192.37,-0.72072,0.23202,-3.1062,0.0018948,0.0078649,"E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232)."]
["AT4G23460",null,739.64,-0.40434,0.13022,-3.105,0.0019029,0.0078951,"Adaptin family protein."]
["AT4G23620",null,271.71,0.66651,0.21466,3.105,0.0019029,0.0078951,"Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein."]
["AT1G55690",null,287.28,-0.6789,0.21867,-3.1047,1.9049E-3,0.0079018,"Sec14p-like phosphatidylinositol transfer family protein."]
["AT3G25640",null,17.593,-2.6509,0.85391,-3.1045,1.9061E-3,0.0079047,"MIZU-KUSSEI-like protein (Protein of unknown function, DUF617)."]
["AT3G15360","TRX-M4",887.01,0.37431,0.12059,3.1039,0.0019101,0.0079196,"full_name=thioredoxin M-type 4. thioredoxin M-type 4. encodes a prokaryotic thioredoxin"]
["AT1G60610",null,576.55,-0.43357,0.13971,-3.1035,0.0019128,0.007929,"SBP (S-ribonuclease binding protein) family protein."]
["AT5G54810","TSB1",2898.2,-0.33295,0.10729,-3.1033,0.0019137,7.9311E-3,"full_name=tryptophan synthase beta-subunit 1. tryptophan synthase beta-subunit 1. A.thaliana tryptophan synthase beta subunit (trpB)"]
["AT1G74780",null,276.09,-0.59146,0.19063,-3.1027,0.0019178,0.0079463,"Nodulin-like / Major Facilitator Superfamily protein."]
["AT1G34180","NAC016",51.595,-1.4495,0.46723,-3.1023,1.9203E-3,0.0079548,"full_name=NAC domain containing protein 16. NAC domain containing protein 16."]
["AT1G19450",null,452.9,-0.48329,0.15579,-3.1021,1.9215E-3,0.007958,"Major facilitator superfamily protein."]
["AT2G42750","DJC77",641.97,-0.41444,0.13362,-3.1016,1.9245E-3,0.007969,"DNAJ heat shock N-terminal domain-containing protein."]
["AT3G11100","VFP3",534.94,-0.55278,0.17829,-3.1005,1.9317E-3,0.007997,"sequence-specific DNA binding transcription factor."]
["AT2G38700","MVD1",301.98,-0.61349,0.1979,-3.1,1.9353E-3,0.0080103,"full_name=mevalonate diphosphate decarboxylase 1. mevalonate diphosphate decarboxylase 1. Encodes mevalonate diphosphate decarboxylase, the enzyme that catalyzes the synthesis of isopentenyl diphosphate, used in sterol and isoprenoid biosynthesis. The protein appears to form a homodimeric complex. Incidentally, it was shown that the Arabidopsis MVD protein could also interact with its yeast homolog to form a heterodimer."]
["AT1G77145",null,74.104,-1.2732,0.41074,-3.0998,0.0019365,0.0080132,"transmembrane protein, putative (DUF506)."]
["AT1G16690",null,116.16,0.90218,0.29107,3.0995,0.0019385,0.0080183,"Enhancer of polycomb-like transcription factor protein."]
["AT1G08840","emb2411",154.5,0.77765,0.2509,3.0995,0.0019385,0.0080183,"full_name=embryo defective 2411. DNA replication helicase."]
["AT1G26670","VTI1B",659.98,-0.5148,0.16611,-3.0992,0.0019401,8.0231E-3,"Vesicle transport v-SNARE family protein. member of VTI1 Gene Family. Normally localizes to the transgolgi network and plasma membrane. A dominant mutation (zip1) alters the subcellular localization of VTI12 and suppresses loss of function mutation (zag1) of VTI11. Interacts with members of the SYP family. Involved in protein trafficking to protein storage vacuoles."]
["AT2G29370",null,6.16,-6.1174,1.9745,-3.0981,1.9475E-3,0.0080517,"NAD(P)-binding Rossmann-fold superfamily protein."]
["AT4G38940",null,74.72,-1.1023,0.35582,-3.098,1.9482E-3,0.0080528,"Galactose oxidase/kelch repeat superfamily protein."]
["AT5G05440","PYL5",174.45,-0.7425,0.23971,-3.0974,1.9521E-3,8.0675E-3,"full_name=PYRABACTIN RESISTANCE 1-LIKE 5. Polyketide cyclase/dehydrase and lipid transport superfamily protein. Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2."]
["AT1G27140","GSTU14",102.45,1.044,0.33712,3.0969,0.0019555,0.0080794,"full_name=glutathione S-transferase tau 14. glutathione S-transferase tau 14. Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002)."]
["AT1G22985","CRF7",68.208,-1.1386,0.36768,-3.0967,0.0019568,0.0080814,"full_name=cytokinin response factor 7. Integrase-type DNA-binding superfamily protein. encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily."]
["AT3G10180",null,38.023,1.7397,0.5618,3.0967,0.0019568,0.0080814,"P-loop containing nucleoside triphosphate hydrolases superfamily protein."]
["AT4G05010","FBS3",57.482,-1.5193,0.49068,-3.0963,0.0019595,0.0080909,"full_name=F-box stress induced 3. F-box family protein."]
["AT1G68220",null,507.96,-0.49805,0.1609,-3.0953,1.9662E-3,0.0081166,"aerobic coproporphyrinogen-III oxidase (DUF1218)."]
["AT5G36910","THI2.2",42.591,-2.1821,0.70502,-3.095,0.0019679,0.0081211,"full_name=thionin 2.2. thionin 2.2. Encodes a thionin that is expressed at a low basal level in seedlings and shows circadian variation. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660."]
["AT1G03900","ABCI18",1063.7,0.38169,0.12333,3.095,0.0019684,0.0081211,"full_name=ATP-binding cassette I18. non-intrinsic ABC protein 4. member of NAP family, an heterogeneous subfamily of the ATP-binding Cassette (ABC) superfamily of membrane transporters. The NAPs proteins are characterized by having only one nucleotide-binding folds (NBFs) domain."]
["AT3G61050","NTMC2T4",1087,-0.37006,0.11957,-3.0949,1.9686E-3,0.0081211,"Calcium-dependent lipid-binding (CaLB domain) family protein. Encodes a novel transcriptional regulator, a calcium-dependent lipid-binding protein containing a C2 domain, that binds specifically to the promoter of THAS1 (thalianol synthase 1). It can bind ceramide and is involved in drought and salt tolerance."]
["AT4G39010","GH9B18",66.715,-1.1879,0.38394,-3.094,1.9751E-3,0.0081462,"full_name=glycosyl hydrolase 9B18. glycosyl hydrolase 9B18."]
["AT2G16760",null,44.525,-1.4714,0.47582,-3.0923,0.0019859,0.008189,"Calcium-dependent phosphotriesterase superfamily protein."]
["AT1G74420","FUT3",95.139,-0.97711,0.3161,-3.0912,0.0019937,0.0082193,"full_name=fucosyltransferase 3. fucosyltransferase 3. Predicted fucosyltransferase, based on similarity to FUT1, but not functionally redundantwith FUT1."]
["AT5G51830","FRK1",370.66,-0.58836,0.19041,-3.09,0.0020013,0.008249,"pfkB-like carbohydrate kinase family protein."]
["AT3G49140",null,678.02,0.4571,0.14795,3.0896,0.0020045,0.0082602,"Pentatricopeptide repeat (PPR) superfamily protein."]
["AT3G19770","VPS9A",341.91,-0.5695,0.18433,-3.0895,2.0049E-3,0.0082602,"Vacuolar sorting protein 9 (VPS9) domain-containing protein. Guanine nucleotide exchange factor VPS9a. Can activate all Rab5 members to GTP-bound forms in vitro. Required for embryogenesis. Regulates the localization of ARA7 and ARA6. Involved in postembryonic root development."]
["AT1G07230","NPC1",603.23,-0.43351,0.14034,-3.0891,0.0020078,0.0082705,"full_name=non-specific phospholipase C1. non-specific phospholipase C1."]
["AT1G22885",null,26.682,-1.9894,0.64408,-3.0888,0.00201,0.0082775,"transmembrane protein."]
["AT4G36840",null,141.58,-0.89542,0.28995,-3.0882,0.002014,0.0082924,"Galactose oxidase/kelch repeat superfamily protein."]
["AT5G56970","CKX3",68.478,-1.1532,0.37346,-3.0878,0.0020166,0.0083012,"full_name=cytokinin oxidase 3. cytokinin oxidase 3. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins."]
["AT4G37280","MRG1",394.42,-0.561,0.18175,-3.0867,2.0241E-3,8.3304E-3,"MRG family protein."]
["AT5G17550","PEX19-2",1503.1,0.37477,0.12144,3.086,0.0020284,0.0083463,"full_name=peroxin 19-2. peroxin 19-2."]
["AT2G29680","CDC6",50.699,1.3988,0.45334,3.0855,0.0020324,0.0083606,"full_name=cell division control 6. cell division control 6. Encodes cell division control protein 6 (CDC6)."]
["AT4G08840","PUM11",13.507,2.9469,0.95549,3.0842,2.0412E-3,0.0083951,"full_name=pumilio 11. pumilio 11. Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts."]
["AT5G03190","CPUORF47",1003.3,-0.42878,0.13906,-3.0834,2.0463E-3,0.0084144,"full_name=conserved peptide upstream open reading frame 47. peptide upstream protein. Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF47 represents a conserved upstream opening reading frame relative to major ORF AT5G03190.1"]
["AT3G10690","GYRA",1409.6,0.34806,0.11291,3.0826,0.0020519,0.0084354,"full_name=DNA GYRASE A. DNA GYRASE A."]
["AT1G74100","SOT16",812.32,0.54111,0.17554,3.0825,0.0020525,0.0084361,"full_name=sulfotransferase 16. sulfotransferase 16. encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with different desulfoglucosinolates, the best substrate is indole-3-methyl-dsGS, followed by benzyl-dsGS. Expression was induced by wounding, jasmonate and ethylene stimulates."]
["AT5G22450",null,766.06,0.46155,0.14979,3.0814,0.0020606,8.4671E-3,"spectrin beta chain, brain."]
["AT1G72610","GER1",11.83,3.3844,1.0984,3.0813,0.0020609,8.4671E-3,"full_name=germin-like protein 1. germin-like protein 1. germin-like protein (GLP1)"]
["AT1G45050","ATUBC2-1",321.98,-0.62629,0.20329,-3.0808,0.0020648,0.0084811,"Ubiquitin-conjugating enzyme family protein. member of ubiquitin-conjugating E2-proteins"]
["AT5G16370","AAE5",797.26,-0.46415,0.15071,-3.0799,0.0020709,0.0085043,"full_name=acyl activating enzyme 5. acyl activating enzyme 5."]
["AT1G71690",null,5.6716,-5.9976,1.9476,-3.0794,0.002074,0.0085151,"glucuronoxylan 4-O-methyltransferase-like protein (DUF579)."]
["AT1G74640",null,155.32,0.75695,0.24585,3.0789,0.0020776,0.0085283,"alpha/beta-Hydrolases superfamily protein."]
["AT5G01260",null,161.42,0.76276,0.24775,3.0788,0.0020786,0.0085303,"Carbohydrate-binding-like fold."]
["AT2G44910","HB4",53.404,-1.2856,0.41758,-3.0786,0.0020798,0.0085332,"full_name=homeobox-leucine zipper protein 4. homeobox-leucine zipper protein 4. Encodes a homeodomain protein whose expression displays a dependence on phyB for both red and far-red light response. Also involved in the shade avoidance syndrome."]
["AT4G13210",null,25.335,-2.0181,0.65555,-3.0785,0.0020802,0.0085332,"Pectin lyase-like superfamily protein."]
["AT5G62290",null,331.63,0.54529,0.17717,3.0777,0.0020858,0.0085544,"nucleotide-sensitive chloride conductance regulator (ICln) family protein."]
["AT3G11710","ATKRS-1",2047.8,0.30827,0.10017,3.0774,0.0020881,0.0085622,"full_name=lysyl-tRNA synthetase 1. lysyl-tRNA synthetase 1."]
["AT3G04340","emb2458",1641.7,0.36161,0.11751,3.0773,2.0888E-3,0.0085631,"full_name=embryo defective 2458. FtsH extracellular protease family."]
["AT5G58650","PSY1",73.381,-1.1383,0.36995,-3.0768,0.0020921,0.0085724,"full_name=plant peptide containing sulfated tyrosine 1. plant peptide containing sulfated tyrosine 1. Encodes PSY1, an18-aa tyrosine-sulfated glycopeptide that promotes cellular proliferation and expansion. PSY1 is widely expressed in various tissues, including shoot apical meristem, and is highly up-regulated by wounding. Perception of PSY1 depends on At1g72300, a leucine-rich repeat receptor kinase (LRR-RK)."]
["AT5G27890",null,311.49,0.55202,0.17941,3.0768,0.0020923,0.0085724,"hypothetical protein."]
["AT2G02570","SPF30",1217.8,-0.33673,0.10944,-3.0768,0.0020925,0.0085724,"nucleic acid binding/RNA binding protein."]
["AT4G37660",null,213.65,0.66044,0.21471,3.076,0.0020981,0.0085936,"Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein."]
["AT5G17370",null,116.81,0.88717,0.28845,3.0757,0.0021003,0.008601,"Transducin/WD40 repeat-like superfamily protein."]
["AT3G57390","AGL18",271.15,-0.67537,0.2196,-3.0754,2.1021E-3,0.0086065,"full_name=AGAMOUS-like 18. AGAMOUS-like 18. encodes a MADS-box containing protein likely to be a transcription factor that is expressed in endosperm and developing gametophytes. The protein sequence is most similar to that of AGL15, which is expressed in developing embryos."]
["AT3G29190",null,5.677,-5.9988,1.9509,-3.0749,0.0021058,0.0086197,"Terpenoid cyclases/Protein prenyltransferases superfamily protein."]
["AT1G27370","SPL10",156.69,0.7579,0.24652,3.0744,2.1094E-3,0.0086324,"full_name=squamosa promoter binding protein-like 10. squamosa promoter binding protein-like 10. In conjunction with SPL11 and SPL2, SPL10 redundantly controls proper development of lateral organs in association with shoot maturation in the reproductive phase. SPL10 also controls lamina shape during vegetative development."]
["AT5G63240",null,20.454,-2.3129,0.75236,-3.0742,0.0021107,0.0086339,"Carbohydrate-binding X8 domain superfamily protein."]
["AT3G60830","ARP7",272.39,0.60813,0.19782,3.0742,0.0021107,0.0086339,"full_name=actin-related protein 7. actin-related protein 7. Encodes an actin-related protein required for normal embryogenesis, plant architecture and floral organ abscission."]
["AT5G19170",null,40.172,1.4866,0.48358,3.0741,0.0021111,0.0086339,"NEP-interacting protein, putative (DUF239)."]
["AT3G27670","RST1",342.49,0.58873,0.19154,3.0737,0.0021144,0.0086454,"full_name=RESURRECTION1. ARM repeat superfamily protein. A novel protein, did not show high similarity to any protein of known function; reveals a novel genetic connection between lipid synthesis and embryo development. Expressed in all tissues examined including leaves, flowers, roots, stems, and siliques, but accumulation levels were not correlated with the degree to which different organs appeared affected by the mutation. Mutant plants showed alterations in the cuticular wax profiles and embryo development."]
["AT2G41670","SIN2",153.75,0.80901,0.26325,3.0731,0.0021184,0.0086601,"P-loop containing nucleoside triphosphate hydrolases superfamily protein. Encodes SIN2 (SHORT INTEGUMENTS 2), a mitochondrial DAR GTPase. SIN2 is hypothesized to function in mitochondrial ribosome assembly. sin2 mutants produce ovules with short integuments due to early cessation of cell division in these structures."]
["AT1G16470","PAB1",1078.1,0.35572,0.11577,3.0726,0.0021223,0.008674,"full_name=proteasome subunit PAB1. proteasome subunit PAB1. Encodes 20S proteasome subunit PAB1 (PAB1)."]
["AT2G38280","FAC1",1154.6,0.3493,0.11372,3.0714,0.0021303,0.008705,"full_name=EMBRYONIC FACTOR1. AMP deaminase, putative / myoadenylate deaminase. Encodes a protein with in vitro AMP deaminase activity that is involved in embryogenesis. Homozygous mutant embryos fail to develop past the zygote stage."]
["AT4G28080","REC2",3888.6,-0.28858,0.093996,-3.0702,0.0021395,8.7405E-3,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT5G08170","EMB1873",268.09,-0.59218,0.19291,-3.0697,2.1424E-3,0.0087505,"full_name=EMBRYO DEFECTIVE 1873. porphyromonas-type peptidyl-arginine deiminase family protein."]
["AT5G13820","TBP1",238.07,-0.62936,0.20503,-3.0696,0.0021433,0.0087524,"full_name=telomeric DNA binding protein 1. telomeric DNA binding protein 1. Encodes a protein that specifically binds plant telomeric DNA repeats. It has a single Myb telomeric DNA-binding domain in C-terminus that prefers the sequence TTTAGGG."]
["AT3G01330","DEL3",15.477,2.7,0.87988,3.0686,0.0021505,0.0087792,"full_name=DP-E2F-like protein 3. DP-E2F-like protein 3. Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway."]
["AT3G17770",null,1016.5,-0.38551,0.12563,-3.0686,2.1508E-3,0.0087792,"Dihydroxyacetone kinase."]
["AT5G02710",null,358.96,0.56602,0.18448,3.0683,0.0021531,0.0087865,"zinc/iron-chelating domain protein."]
["AT5G16120","MAGL15",1141.2,-0.38251,0.12468,-3.068,2.1549E-3,0.0087919,"alpha/beta-Hydrolases superfamily protein."]
["AT1G20760","ATEH1",684.92,-0.40257,0.13125,-3.0671,0.0021613,0.0088161,"Calcium-binding EF hand family protein."]
["AT1G03090","MCCA",523.72,-0.50111,0.1634,-3.0668,0.0021637,0.0088241,"methylcrotonyl-CoA carboxylase alpha chain. MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion."]
["AT5G22570","WRKY38",5.8422,5.9424,1.9381,3.0662,0.0021682,0.0088405,"full_name=WRKY DNA-binding protein 38. WRKY DNA-binding protein 38. member of WRKY Transcription Factor; Group III"]
["AT3G61320","BEST",186.12,0.73367,0.23931,3.0658,0.0021709,0.0088496,"Bestrophin-like protein."]
["AT5G67030","ABA1",1749,0.30152,0.098389,3.0645,0.0021801,0.0088851,"full_name=ABA DEFICIENT 1. zeaxanthin epoxidase (ZEP) (ABA1). Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do."]
["AT5G41600","BTI3",416.19,-0.50705,0.1655,-3.0637,0.0021859,0.0089071,"full_name=VIRB2-interacting protein 3. VIRB2-interacting protein 3."]
["AT2G34357",null,1150.1,0.35039,0.11439,3.0632,0.00219,0.0089218,"ARM repeat superfamily protein."]
["AT5G43250","NF-YC13",93.218,1.1319,0.36958,3.0628,0.002193,0.0089323,"full_name=nuclear factor Y, subunit C13. nuclear factor Y, subunit C13."]
["AT1G27320","HK3",910.89,-0.38193,0.12473,-3.062,0.0021985,0.0089528,"full_name=histidine kinase 3. histidine kinase 3. Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2."]
["AT1G33040","NACA5",776.27,0.39061,0.12758,3.0617,0.0022007,0.0089597,"full_name=nascent polypeptide-associated complex subunit alpha-like protein 5. nascent polypeptide-associated complex subunit alpha-like protein 5."]
["AT1G24430",null,30.557,-2.1812,0.71256,-3.0611,0.0022054,0.0089767,"HXXXD-type acyl-transferase family protein."]
["AT5G20850","RAD51",20.591,2.2375,0.73115,3.0603,0.0022115,0.0089995,"full_name=RAS associated with diabetes protein 51. RAS associated with diabetes protein 51. Encodes a homolog of yeast RAD51. Its mRNA is most abundant in early flower buds and is expressed at high levels in exponentially growing cells in suspension cultures and is induced in response to gamma radiation. Also involved in defense gene transcription during plant immune responses."]
["AT5G57960","HFLX",416.85,0.51578,0.16857,3.0598,0.0022148,0.0090095,"GTP-binding protein, HflX."]
["AT3G54050","HCEF1",572.69,0.48368,0.15808,3.0598,0.0022149,0.0090095,"full_name=high cyclic electron flow 1. high cyclic electron flow 1. Encodes a chloroplastic fructose 1,6-bisphosphate phosphatase. also known as HCEF1 (High Cyclic Electron Flow 1). hcef1 mutants have constitutively elevated electron flow (CEFI) and plants with antisense suppression of this enzyme have higher levels of net leaf photosynthesis and increased sucrose biosynthesis."]
["AT1G13635",null,5.6607,-5.9951,1.9595,-3.0595,0.0022167,0.0090151,"DNA glycosylase superfamily protein."]
["AT1G03160","FZL",511.11,0.48723,0.15927,3.0591,0.0022198,0.0090255,"full_name=FZO-like. FZO-like protein. A new plant-specific member of the dynamin superfamily; defines a new protein class within the dynamin superfamily of membrane remodeling GTPases that regulates organization of the thylakoid network in plants. Targeted to chloroplasts and associated with thylakoid and envelope membranes as punctate structures. Knockout mutants have abnormalities in chloroplast and thylakoid morphology, including disorganized grana stacks and alterations in the relative proportions of grana and stroma thylakoids. Overexpression of FZL-GFP also conferred defects in thylakoid organization."]
["AT5G15070","ATVIP2",151.11,0.76706,0.25076,3.0589,2.2212E-3,0.0090296,"Phosphoglycerate mutase-like family protein."]
["AT5G13750","ZIFL1",40.789,1.5192,0.4967,3.0585,0.0022243,0.00904,"full_name=zinc induced facilitator-like 1. zinc induced facilitator-like 1."]
["AT3G48250","BIR6",256.39,0.66214,0.2165,3.0584,0.0022254,0.0090425,"full_name=Buthionine sulfoximine-insensitive roots 6. Pentatricopeptide repeat (PPR) superfamily protein. Encodes a pentatricopeptide repeat protein implicated in splicing of intron 1 of mitochondrial nad7 transcripts."]
["AT5G53850","DEP1",1010.6,0.4082,0.13348,3.0582,0.0022265,0.0090453,"haloacid dehalogenase-like hydrolase family protein. Encodes a trifunctional dehydratase / enolase / phosphatase involved in the methionine salvage."]
["AT5G62930",null,328.47,-0.54352,0.17773,-3.0581,0.0022278,0.0090485,"SGNH hydrolase-type esterase superfamily protein."]
["AT1G10600","AMSH2",294.6,-0.90873,0.29729,-3.0567,0.0022378,0.0090872,"full_name=associated molecule with the SH3 domain of STAM 2. associated molecule with the SH3 domain of STAM 2."]
["AT2G31350","GLX2-5",674.96,-0.40838,0.13361,-3.0565,0.0022391,0.0090903,"full_name=glyoxalase 2-5. glyoxalase 2-5. Encodes a mitochondrial glyoxalase 2 that can accommodate a number of different metal centers and with the predominant metal center being Fe(III)Zn(II)."]
["AT1G61065",null,183.99,-0.74843,0.24487,-3.0564,0.0022398,0.0090915,"1,3-beta-glucan synthase component (DUF1218)."]
["AT5G13210",null,12.296,3.0926,1.0119,3.0561,0.0022421,0.0090988,"Uncharacterized conserved protein UCP015417, vWA."]
["AT2G24500","FZF",786.95,0.37929,0.12412,3.0559,2.2442E-3,0.0091054,"Zinc finger protein 622. Encodes a C2H2 zinc finger protein FZF."]
["AT5G20040","IPT9",320.18,0.54991,0.17998,3.0554,0.0022473,0.0091146,"full_name=isopentenyltransferase 9. isopentenyltransferase 9. Encodes tRNA isopentenyltransferase AtIPT9."]
["AT4G26700","FIM1",1183.3,-0.33378,0.10924,-3.0554,0.0022474,0.0091146,"full_name=fimbrin 1. fimbrin 1. fimbrin-like protein"]
["AT5G07430",null,13.507,3.5886,1.1746,3.0552,0.0022492,0.0091198,"Pectin lyase-like superfamily protein."]
["AT1G24100","UGT74B1",450.46,-0.56936,0.18642,-3.0542,0.0022565,0.0091473,"full_name=UDP-glucosyl transferase 74B1. UDP-glucosyl transferase 74B1. Encodes a UDP-glucose:thiohydroximate S-glucosyltransferase, involved in glucosinolate biosynthesis"]
["AT3G01490","CBC1",214.51,0.79955,0.26187,3.0533,2.2637E-3,0.0091744,"Protein kinase superfamily protein."]
["AT4G18880","HSF A4A",93.895,0.993,0.32524,3.0531,0.0022646,0.0091764,"full_name=heat shock transcription factor A4A. heat shock transcription factor A4A. Encodes a member of Heat Stress Transcription Factor(Hsf) family that is a substrate of the MPK3/MPK6 signaling and regulates stress responses."]
["AT5G61410","RPE",2459.8,-0.28047,0.091872,-3.0528,0.0022671,0.0091843,"full_name=D-ribulose-5-phosphate-3-epimerase. D-ribulose-5-phosphate-3-epimerase. Arabidopsis thaliana ribulose-5-phosphate-3-epimerase mRNA"]
["AT3G04880","DRT102",425.69,-0.48469,0.15877,-3.0527,0.002268,0.0091862,"full_name=DNA-DAMAGE-REPAIR/TOLERATION 2. DNA-damage-repair/toleration protein (DRT102). encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes)."]
["AT1G10270","GRP23",336.62,0.59431,0.19477,3.0513,0.0022784,0.0092263,"full_name=glutamine-rich protein 23. glutamine-rich protein 23."]
["AT5G40970",null,97.061,-0.94545,0.30986,-3.0512,2.2794E-3,9.2283E-3,"hypothetical protein (DUF 3339)."]
["AT3G58200",null,397.26,-0.6172,0.20245,-3.0487,2.2986E-3,0.0093042,"TRAF-like family protein."]
["AT4G09890",null,33.346,-1.7122,0.56164,-3.0486,0.0022995,0.0093056,"mediator of RNA polymerase II transcription subunit, putative (DUF3511)."]
["AT2G34660","ABCC2",1034.2,0.39564,0.12979,3.0484,0.0023009,0.0093095,"full_name=ATP-binding cassette C2. multidrug resistance-associated protein 2. encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. An ABCC-type arsenite-phytochelatin transporter. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim."]
["AT2G20390",null,347.63,0.52562,0.17245,3.0479,0.0023044,0.0093214,"cytochrome oxidase complex assembly protein."]
["AT5G02630","Cand6",87.96,1.0113,0.33188,3.0471,0.0023103,0.0093435,"full_name=candidate G-protein Coupled Receptor 6. Lung seven transmembrane receptor family protein."]
["AT1G62240",null,351.43,-2.977,0.97707,-3.0469,0.0023123,0.0093494,"hypothetical protein."]
["AT1G21190","LSM3A",470.37,0.46301,0.152,3.046,0.002319,0.0093745,"full_name=SM-like 3A. Small nuclear ribonucleoprotein family protein."]
["AT1G34380","OEX2",133.23,0.86344,0.28358,3.0447,0.0023288,9.41E-3,"5'-3' exonuclease family protein."]
["AT1G26160",null,421.25,-0.48149,0.15814,-3.0447,0.0023293,9.41E-3,"Metal-dependent phosphohydrolase."]
["AT3G29230",null,237.06,0.66489,0.21838,3.0447,0.0023293,9.41E-3,"Tetratricopeptide repeat (TPR)-like superfamily protein."]
["AT3G18420","SG1",1030.2,0.35969,0.11814,3.0446,0.0023297,9.41E-3,"Protein prenylyltransferase superfamily protein."]
["AT3G01400",null,219.41,-0.71707,0.2356,-3.0435,0.0023382,0.0094424,"ARM repeat superfamily protein."]
["AT1G26690",null,176.16,-0.76795,0.25233,-3.0434,0.0023391,0.0094438,"emp24/gp25L/p24 family/GOLD family protein."]
["AT2G01110","APG2",701.73,0.46166,0.15169,3.0433,0.0023396,0.0094438,"full_name=ALBINO AND PALE GREEN 2. Sec-independent periplasmic protein translocase. mutant is Albino and pale green; Chloroplast Protein Translocation (tatC). Core subunit of the chloroplast Tat translocase. Integral chloroplast thylakoid membrane protein."]
["AT5G62720","ATNITR2;1",648.56,-0.47551,0.15629,-3.0425,0.0023462,0.0094683,"Integral membrane HPP family protein."]
["AT3G09980","ACIP1",569.87,-0.43036,0.14146,-3.0422,2.3487E-3,0.0094765,"ankyrin repeat 30A-like protein (DUF662). Encodes ACIP1, a microtubules-associated protein required for bacterial immunity."]
["AT2G37060","NF-YB8",39.462,-1.5011,0.49346,-3.0421,0.0023493,0.0094768,"full_name=nuclear factor Y, subunit B8. nuclear factor Y, subunit B8."]
["AT4G27000","ATRBP45C",1899.5,0.30714,0.10098,3.0417,0.0023521,0.0094862,"RNA-binding (RRM/RBD/RNP motifs) family protein."]
["AT3G18410",null,1047.4,0.38797,0.12756,3.0416,0.0023535,0.0094886,"NADH dehydrogenase ubiquinone 1 beta subcomplex subunit 10-B-like protein (Complex I subunit NDUFS6)."]
["AT3G28040",null,228.04,-0.69266,0.22773,-3.0415,0.0023537,0.0094886,"Leucine-rich receptor-like protein kinase family protein."]
["AT1G31860","AT-IE",468.84,0.48989,0.16113,3.0404,0.002363,0.0095239,"histidine biosynthesis bifunctional protein (HISIE). encodes a bifunctional protein that has phosphoribosyl-ATP pyrophosphohydrolase (PRA-PH) and phosphoribosyl-AMP cyclohydrolase (PRA-CH) activities."]
["AT4G16141","GATA17L",509.82,0.46325,0.15239,3.04,0.0023662,0.0095348,"GATA type zinc finger transcription factor family protein."]
["AT1G03970","GBF4",415.76,-0.48532,0.15966,-3.0398,0.0023675,0.0095382,"full_name=G-box binding factor 4. G-box binding factor 4. encodes a basic leucine zipper G-box binding factor that can bind to G-box motifs only as heterodimers with GBF2 or GBF3. A single amino acid change can confer G-box binding as homodimers."]
["AT4G12735",null,9.7343,5.2032,1.7136,3.0364,2.3939E-3,9.6425E-3,"hypothetical protein."]
["AT4G12620","ORC1B",77.099,1.1253,0.3706,3.0363,0.0023951,0.0096451,"full_name=origin of replication complex 1B. origin of replication complex 1B. Origin Recognition Complex subunit 1b. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with ORC2 and ORC5. Highly expressed in proliferating cells. Expression levels are independent of light regime."]
["AT2G27590",null,138.46,0.86634,0.28541,3.0354,0.0024021,0.0096713,"S-adenosyl-L-methionine-dependent methyltransferases superfamily protein."]
["AT1G09560","GLP5",455.75,0.48963,0.16131,3.0353,0.0024027,0.0096717,"full_name=germin-like protein 5. germin-like protein 5. Encodes a plasodesmata-located protein involved in regulating primary root growth by controlling phloem-mediated allocation of resources between the primary and lateral root meristems."]
["AT1G22030",null,69.919,-1.1602,0.38253,-3.033,0.0024214,0.0097449,"BPS1-like protein."]
["AT3G56720",null,1111.7,0.40781,0.13448,3.0326,0.0024247,0.0097562,"pre-mRNA-splicing factor."]
["AT2G40830","RHC1A",180.44,7.1164,2.347,3.0321,0.0024284,0.0097689,"full_name=RING-H2 finger C1A. RING-H2 finger C1A. Encodes a putative RING-H2 finger protein RHC1a."]
["AT3G02710",null,464.77,0.47402,0.15636,3.0316,0.002433,0.0097853,"ARM repeat superfamily protein. Encodes a protein with a putative role in mRNA splicing."]
["AT5G56250","HAP8",222.66,-0.65519,0.21615,-3.0311,0.0024365,0.0097971,"full_name=HAPLESS 8. hapless 8."]
["AT2G45310","GAE4",20.549,2.228,0.73521,3.0305,0.0024416,0.0098158,"full_name=UDP-D-glucuronate 4-epimerase 4. UDP-D-glucuronate 4-epimerase 4. UDP-D-glucuronate 4-epimerase"]
["AT5G06320","NHL3",426.78,0.5454,0.18002,3.0297,0.0024479,0.0098389,"full_name=NDR1/HIN1-like 3. NDR1/HIN1-like 3. encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and Pseudomonas syringae pv. tomato DC3000. The gene product is localized to the plasma membrane."]
["AT3G11850","MYOB8",342.57,0.52414,0.17303,3.0293,0.0024514,0.0098508,"myosin-binding protein (Protein of unknown function, DUF593)."]
["AT1G47900",null,521.54,-0.53287,0.17591,-3.0292,0.0024519,0.0098508,"filament-like protein (DUF869)."]
["AT4G19700","RING",399.12,-0.63067,0.20824,-3.0285,0.0024573,0.0098705,"SBP (S-ribonuclease binding protein) family protein. Encodes BOI (Botrytis Susceptible 1 Interactor). Has E3 ubiquitin ligase activity. Interacts with and ubiquitinates BOS1 (Botrytis Susceptible 1). It prevents caspase activation and attenuates cell death."]
["AT1G14920","GAI",1118.9,0.3488,0.11519,3.0281,0.0024611,0.0098838,"full_name=GIBBERELLIC ACID INSENSITIVE. GRAS family transcription factor family protein. Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA."]
["AT1G74800","GALT5",187.69,0.69479,0.22946,3.0279,0.0024623,0.0098862,"Galactosyltransferase family protein."]
["AT3G48660",null,184.59,-0.76368,0.25233,-3.0265,2.4738E-3,0.0099303,"transmembrane protein, putative (DUF 3339)."]
["AT1G05490","chr31",83.21,-1.0569,0.3494,-3.0249,0.002487,0.0099798,"full_name=chromatin remodeling 31. chromatin remodeling 31."]
["AT1G74650","MYB31",78.153,1.0431,0.34485,3.0249,0.0024872,0.0099798,"full_name=myb domain protein 31. myb domain protein 31. Member of the R2R3 factor gene family."]
["AT1G22610","MCTP6",424.85,-0.48563,0.16055,-3.0247,0.0024886,0.0099833,"C2 calcium/lipid-binding plant phosphoribosyltransferase family protein."]
["AT3G44620",null,250.87,0.72151,0.23856,3.0244,0.0024915,0.0099929,"protein-tyrosine phosphatase."]

{"sheet":"Supplemental Data Set 3","index":3,"n_rows":2362,"n_cols":31,"rows_kept":2362,"merged":[[0,0,0,17],[2,0,2,6],[2,8,2,14],[2,16,2,22],[2,24,2,30]]}
["Supplemental Data Set 3. Gene Ontology (GO) term enrichment for downregulated and upregulated differentially expressed (DE) genes at 20 and 22 days after pollination (DAP)"]
[]
["GO for downregulated alpha_0.01 in DE abi3-6 20-22DAP",{"$nulls":7},"GO for downregulated alpha_0.01 in DE Col-0 20-22DAP",{"$nulls":7},"GO for upregulated alpha_0.01 in DE abi3-6 20-22DAP",{"$nulls":7},"GO for upregulated alpha_0.01 in DE Col-0 20-22DAP"]
["GO.ID","Term","Annotated","Significant","Expected","raw.p.value","padj",null,"GO.ID","Term","Annotated","Significant","Expected","raw.p.value","padj",null,"GO.ID","Term","Annotated","Significant","Expected","raw.p.value","padj",null,"GO.ID","Term","Annotated","Significant","Expected","raw.p.value","padj"]
["GO:0006412","translation",575,173,68.26,{"v":0,"d":"0.00E+00"},0,null,"GO:0009408","response to heat",321,112,{"v":59.57,"d":"5.96E+01"},{"v":9e-09,"d":"9.00E-09"},{"v":1.98E-5,"d":"1.98E-05"},null,"GO:0009414","response to water deprivation",1041,{"v":424,"d":"4.24E+02"},176.47,0,0,null,"GO:0006355","regulation of DNA-templated transcription",1393,375,275.87,{"v":2.8e-09,"d":"2.80E-09"},{"v":6.16e-06,"d":"6.16E-06"}]
["GO:0016070","RNA metabolic process",4334,591,514.48,{"v":1.3e-10,"d":"1.30E-10"},{"v":1.53e-07,"d":"1.53E-07"},null,"GO:0009414","response to water deprivation",881,225,{"v":163.5,"d":"1.64E+02"},{"v":2E-8,"d":"2.00E-08"},{"v":2.2e-05,"d":"2.20E-05"},null,"GO:0009737","response to abscisic acid",1018,{"v":367,"d":"3.67E+02"},172.57,0,0,null,"GO:0009651","response to salt stress",537,155,106.35,{"v":5.4e-07,"d":"5.40E-07"},{"v":0.000594,"d":"5.94E-04"}]
["GO:0006270","DNA replication initiation",26,14,3.09,{"v":2.5e-07,"d":"2.50E-07"},{"v":0.000196,"d":"1.96E-04"},null,"GO:0051259","protein complex oligomerization",45,21,{"v":8.35,"d":"8.35E+00"},{"v":8e-08,"d":"8.00E-08"},{"v":5.86e-05,"d":"5.86E-05"},null,"GO:0009651","response to salt stress",615,233,104.25,0,0,null,"GO:0031146","SCF-dependent proteasomal ubiquitin-dependent protein catabolic process",56,26,11.09,{"v":6e-06,"d":"6.00E-06"},3.738E-3]
["GO:0000028","ribosomal small subunit assembly",27,14,3.21,{"v":4.7E-7,"d":"4.70E-07"},{"v":0.000277,"d":"2.77E-04"},null,"GO:0010150","leaf senescence",226,67,{"v":41.94,"d":"4.19E+01"},{"v":1.5E-6,"d":"1.50E-06"},8.25E-4,null,"GO:0006970","response to osmotic stress",900,354,152.56,{"v":2.1E-25,"d":"2.10E-25"},1.24E-22,null,"GO:0006606","protein import into nucleus",47,23,9.31,{"v":6.8e-06,"d":"6.80E-06"},3.738E-3]
["GO:0030490","maturation of SSU-rRNA",52,21,6.17,{"v":9e-07,"d":"9.00E-07"},{"v":0.000424,"d":"4.24E-04"},null,"GO:0009737","response to abscisic acid",852,214,{"v":158.12,"d":"1.58E+02"},{"v":3.5e-06,"d":"3.50E-06"},1.539E-3,null,"GO:0071456","cellular response to hypoxia",201,88,34.07,{"v":3.2e-19,"d":"3.20E-19"},{"v":1.51e-16,"d":"1.51E-16"},null,"GO:2000028","regulation of photoperiodism, flowering",78,32,15.45,{"v":2.1e-05,"d":"2.10E-05"},9.11E-3]
["GO:0019761","glucosinolate biosynthetic process",86,25,10.21,{"v":1.4E-5,"d":"1.40E-05"},0.005011,null,"GO:0042542","response to hydrogen peroxide",61,26,{"v":11.32,"d":"1.13E+01"},{"v":1.2E-5,"d":"1.20E-05"},4.398E-3,null,"GO:0009409","response to cold",561,187,95.1,{"v":7e-17,"d":"7.00E-17"},2.75E-14,null,"GO:0006364","rRNA processing",233,78,46.14,{"v":2.6e-05,"d":"2.60E-05"},9.11E-3]
["GO:0043412","macromolecule modification",2607,250,309.47,{"v":1.6e-05,"d":"1.60E-05"},0.005011,null,"GO:0048316","seed development",1012,211,{"v":187.82,"d":"1.88E+02"},{"v":2.2e-05,"d":"2.20E-05"},0.006911,null,"GO:0009611","response to wounding",727,211,123.24,{"v":1.2E-16,"d":"1.20E-16"},{"v":4.04e-14,"d":"4.04E-14"},null,"GO:0009739","response to gibberellin",86,28,17.03,{"v":2.9E-5,"d":"2.90E-05"},9.11E-3]
["GO:0051301","cell division",538,109,63.86,{"v":1.7E-5,"d":"1.70E-05"},0.005011,null,"GO:0006457","protein folding",172,68,{"v":31.92,"d":"3.19E+01"},{"v":3.8e-05,"d":"3.80E-05"},0.010445,null,"GO:0044248","cellular catabolic process",1434,392,243.08,{"v":3.5e-16,"d":"3.50E-16"},1.03E-13,null,"GO:0010114","response to red light",65,27,12.87,{"v":4.8e-05,"d":"4.80E-05"},0.013194]
["GO:0000727","double-strand break repair via break-induced replication",11,7,1.31,{"v":7e-05,"d":"7.00E-05"},0.01834,null,"GO:0005975","carbohydrate metabolic process",631,135,{"v":117.11,"d":"1.17E+02"},{"v":1.1E-4,"d":"1.10E-04"},0.026877,null,"GO:1901701","cellular response to oxygen-containing compound",1157,329,196.13,{"v":1.3E-14,"d":"1.30E-14"},{"v":3.41e-12,"d":"3.41E-12"},null,"GO:0009755","hormone-mediated signaling pathway",748,208,148.13,{"v":9.3e-05,"d":"9.30E-05"},0.022723]
["GO:0045490","pectin catabolic process",39,14,4.63,{"v":8.8e-05,"d":"8.80E-05"},0.02075,null,"GO:0006970","response to osmotic stress",786,184,{"v":145.87,"d":"1.46E+02"},{"v":0.00013,"d":"1.30E-04"},0.028587,null,"GO:0050832","defense response to fungus",643,183,109,{"v":4E-14,"d":"4.00E-14"},9.43E-12,null,"GO:0009414","response to water deprivation",881,218,174.47,{"v":1.1E-4,"d":"1.10E-04"},0.024189]
["GO:0002181","cytoplasmic translation",78,24,9.26,{"v":0.00016,"d":"1.60E-04"},0.034298,null,"GO:0006790","sulfur compound metabolic process",381,103,{"v":70.71,"d":"7.07E+01"},{"v":0.00019,"d":"1.90E-04"},0.037983,null,"GO:0006979","response to oxidative stress",573,179,97.13,{"v":4.9e-14,"d":"4.90E-14"},{"v":1.05e-11,"d":"1.05E-11"},null,"GO:0010035","response to inorganic substance",1453,353,287.75,{"v":0.00016,"d":"1.60E-04"},0.031985]
["GO:0044085","cellular component biogenesis",1629,264,193.37,{"v":0.00019,"d":"1.90E-04"},0.034584,null,"GO:0006979","response to oxidative stress",475,134,{"v":88.15,"d":"8.82E+01"},{"v":0.00034,"d":"3.40E-04"},0.062305,null,"GO:1901565","organonitrogen compound catabolic process",959,265,162.57,{"v":1.5e-13,"d":"1.50E-13"},{"v":2.95e-11,"d":"2.95E-11"},null,"GO:0007265","Ras protein signal transduction",11,8,2.18,{"v":0.00022,"d":"2.20E-04"},0.040315]
["GO:0042273","ribosomal large subunit biogenesis",73,27,8.67,{"v":0.00021,"d":"2.10E-04"},0.034584,null,"GO:0009409","response to cold",447,106,{"v":82.96,"d":"8.30E+01"},{"v":0.00054,"d":"5.40E-04"},0.091343,null,"GO:0009408","response to heat",346,121,58.65,{"v":7.1E-12,"d":"7.10E-12"},{"v":1.29e-09,"d":"1.29E-09"},null,"GO:0006635","fatty acid beta-oxidation",40,18,7.92,{"v":0.00026,"d":"2.60E-04"},0.04398]
["GO:1901259","chloroplast rRNA processing",24,10,2.85,{"v":0.00022,"d":"2.20E-04"},0.034584,null,"GO:0042026","protein refolding",35,15,{"v":6.5,"d":"6.50E+00"},{"v":0.00078,"d":"7.80E-04"},0.116822,null,"GO:0042742","defense response to bacterium",798,202,135.27,{"v":3.7e-11,"d":"3.70E-11"},{"v":6.23e-09,"d":"6.23E-09"},null,"GO:0048573","photoperiodism, flowering",185,68,36.64,{"v":0.00039,"d":"3.90E-04"},0.061258]
["GO:1901566","organonitrogen compound biosynthetic process",1743,356,206.91,{"v":0.00022,"d":"2.20E-04"},0.034584,null,"GO:0019915","lipid storage",22,11,{"v":4.08,"d":"4.08E+00"},{"v":0.00082,"d":"8.20E-04"},0.116822,null,"GO:0009416","response to light stimulus",1980,534,335.64,{"v":1.5E-10,"d":"1.50E-10"},{"v":2.36E-8,"d":"2.36E-08"},null,"GO:0006886","intracellular protein transport",440,108,87.14,{"v":0.00042,"d":"4.20E-04"},0.061572]
["GO:0006268","DNA unwinding involved in DNA replication",13,7,1.54,{"v":2.9E-4,"d":"2.90E-04"},0.042739,null,"GO:0000103","sulfate assimilation",19,10,{"v":3.53,"d":"3.53E+00"},{"v":0.00085,"d":"8.50E-04"},0.116822,null,"GO:0009768","photosynthesis, light harvesting in photosystem I",23,17,3.9,{"v":2.7e-09,"d":"2.70E-09"},{"v":3.98e-07,"d":"3.98E-07"},null,"GO:0009751","response to salicylic acid",221,67,43.77,{"v":0.00046,"d":"4.60E-04"},0.063221]
["GO:0000910","cytokinesis",190,40,22.55,{"v":3.1E-4,"d":"3.10E-04"},0.042999,null,"GO:0009644","response to high light intensity",51,19,{"v":9.47,"d":"9.47E+00"},0.0013,0.160038,null,"GO:0035970","peptidyl-threonine dephosphorylation",43,24,7.29,{"v":8.3e-09,"d":"8.30E-09"},{"v":1.15E-6,"d":"1.15E-06"},null,"GO:1901701","cellular response to oxygen-containing compound",970,247,192.1,{"v":0.00067,"d":"6.70E-04"},0.086666]
["GO:0010197","polar nucleus fusion",26,10,3.09,{"v":0.00048,"d":"4.80E-04"},0.06288,null,"GO:0006995","cellular response to nitrogen starvation",23,11,{"v":4.27,"d":"4.27E+00"},1.31E-3,0.160038,null,"GO:0031347","regulation of defense response",682,168,115.61,{"v":1.8e-08,"d":"1.80E-08"},{"v":2.36e-06,"d":"2.36E-06"},null,"GO:0009733","response to auxin",255,77,50.5,{"v":0.00075,"d":"7.50E-04"},0.091625]
["GO:0009059","macromolecule biosynthetic process",3808,555,452.04,{"v":0.00053,"d":"5.30E-04"},0.065776,null,"GO:0061077","chaperone-mediated protein folding",55,24,{"v":10.21,"d":"1.02E+01"},1.41E-3,0.163189,null,"GO:0009644","response to high light intensity",63,33,10.68,{"v":4.1e-08,"d":"4.10E-08"},{"v":5.09e-06,"d":"5.09E-06"},null,"GO:0009908","flower development",451,120,89.32,1E-3,0.107856]
["GO:0006364","rRNA processing",237,70,28.13,{"v":0.00073,"d":"7.30E-04"},0.086067,null,"GO:0009611","response to wounding",546,126,{"v":101.33,"d":"1.01E+02"},1.49E-3,0.163826,null,"GO:0071396","cellular response to lipid",824,230,139.68,{"v":1.1e-07,"d":"1.10E-07"},{"v":1.3e-05,"d":"1.30E-05"},null,"GO:0050832","defense response to fungus",497,127,98.42,1E-3,0.107856]
["GO:0034976","response to endoplasmic reticulum stress",114,23,13.53,{"v":0.0008,"d":"8.00E-04"},0.089829,null,"GO:0051085","chaperone cofactor-dependent protein refolding",41,16,{"v":7.61,"d":"7.61E+00"},1.75E-3,0.18325,null,"GO:0009753","response to jasmonic acid",536,140,90.86,{"v":3.5e-07,"d":"3.50E-07"},{"v":3.93E-5,"d":"3.93E-05"},null,"GO:0048367","shoot system development",1199,324,237.45,0.00103,0.107856]
["GO:1903046","meiotic cell cycle process",267,40,31.69,{"v":0.00085,"d":"8.50E-04"},0.091105,null,"GO:0042440","pigment metabolic process",291,71,{"v":54.01,"d":"5.40E+01"},1.9E-3,0.189914,null,"GO:0071482","cellular response to light stimulus",171,72,28.99,{"v":6.8e-07,"d":"6.80E-07"},{"v":7.29e-05,"d":"7.29E-05"},null,"GO:0007623","circadian rhythm",131,46,25.94,0.0013,0.129941]
["GO:0042545","cell wall modification",99,28,11.75,{"v":9.1E-4,"d":"9.10E-04"},0.093295,null,"GO:0006334","nucleosome assembly",24,11,{"v":4.45,"d":"4.45E+00"},0.00202,0.189994,null,"GO:0010604","positive regulation of macromolecule metabolic process",710,172,120.36,{"v":8.6e-07,"d":"8.60E-07"},{"v":8.82e-05,"d":"8.82E-05"},null,"GO:0010604","positive regulation of macromolecule metabolic process",637,159,126.15,0.00136,0.130028]
["GO:0048316","seed development",1113,177,132.12,{"v":0.00098,"d":"9.80E-04"},0.095263,null,"GO:0010043","response to zinc ion",38,15,{"v":7.05,"d":"7.05E+00"},0.00211,0.189994,null,"GO:0009269","response to desiccation",25,15,4.24,{"v":1.6e-06,"d":"1.60E-06"},{"v":0.000148,"d":"1.48E-04"},null,"GO:0009611","response to wounding",546,136,108.13,0.00143,0.131024]
["GO:0003002","regionalization",232,48,27.54,1.01E-3,0.095263,null,"GO:0010431","seed maturation",90,27,16.7,2.16E-3,0.189994,null,"GO:0006082","organic acid metabolic process",1838,413,311.57,{"v":1.6e-06,"d":"1.60E-06"},{"v":0.000148,"d":"1.48E-04"},null,"GO:0051168","nuclear export",64,23,12.67,0.00152,0.133699]
["GO:0009742","brassinosteroid mediated signaling pathway",64,16,7.6,0.00126,0.111787,null,"GO:0010117","photoprotection",12,7,2.23,2.48E-3,0.204426,null,"GO:0009631","cold acclimation",50,23,8.48,{"v":1.7E-6,"d":"1.70E-06"},{"v":0.000148,"d":"1.48E-04"},null,"GO:0009624","response to nematode",56,21,11.09,0.0016,0.135323]
["GO:0000278","mitotic cell cycle",257,36,30.51,0.00128,0.111787,null,"GO:0034976","response to endoplasmic reticulum stress",109,32,20.23,0.00251,0.204426,null,"GO:0010035","response to inorganic substance",1761,595,298.52,{"v":1.7E-6,"d":"1.70E-06"},{"v":0.000148,"d":"1.48E-04"},null,"GO:0071456","cellular response to hypoxia",166,49,32.87,0.0017,0.138456]
["GO:0048229","gametophyte development",406,52,48.2,0.00138,0.115461,null,"GO:0032787","monocarboxylic acid metabolic process",530,118,98.36,2.96E-3,0.225208,null,"GO:0045893","positive regulation of DNA-templated transcription",330,85,55.94,{"v":2e-06,"d":"2.00E-06"},{"v":1.63E-4,"d":"1.63E-04"},null,"GO:0042742","defense response to bacterium",645,153,127.73,0.00213,0.163459]
["GO:0010120","camalexin biosynthetic process",16,7,1.9,1.42E-3,0.115461,null,"GO:0051603","proteolysis involved in protein catabolic process",447,99,82.96,2.97E-3,0.225208,null,"GO:0009751","response to salicylic acid",291,81,49.33,{"v":2e-06,"d":"2.00E-06"},{"v":1.63E-4,"d":"1.63E-04"},null,"GO:0000462","maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)",36,15,7.13,0.00219,0.163459]
["GO:0006261","DNA-templated DNA replication",131,39,15.55,1.49E-3,0.117114,null,"GO:0010286","heat acclimation",59,20,10.95,0.00422,0.295491,null,"GO:0007623","circadian rhythm",160,59,27.12,{"v":2.9e-06,"d":"2.90E-06"},{"v":0.000228,"d":"2.28E-04"},null,"GO:0009612","response to mechanical stimulus",14,8,2.77,0.00223,0.163459]
["GO:0042254","ribosome biogenesis",330,104,39.17,1.56E-3,0.118615,null,"GO:0031930","mitochondria-nucleus signaling pathway",10,6,1.86,4.3E-3,0.295491,null,"GO:0009639","response to red or far red light",373,106,63.23,{"v":5.2e-06,"d":"5.20E-06"},{"v":0.000396,"d":"3.96E-04"},null,"GO:0031056","regulation of histone modification",44,15,8.71,0.00238,0.168826]
["GO:0000226","microtubule cytoskeleton organization",175,20,20.77,0.00163,0.118615,null,"GO:0010344","seed oilbody biogenesis",10,6,1.86,4.3E-3,0.295491,null,"GO:0009755","hormone-mediated signaling pathway",887,220,150.36,{"v":5.7e-06,"d":"5.70E-06"},{"v":0.00042,"d":"4.20E-04"},null,"GO:0009555","pollen development",245,74,48.52,0.00251,0.172484]
["GO:0090329","regulation of DNA-templated DNA replication",38,13,4.51,1.66E-3,0.118615,null,"GO:0006857","oligopeptide transport",13,7,2.41,0.00452,0.301196,null,"GO:0002213","defense response to insect",60,26,10.17,{"v":8.1e-06,"d":"8.10E-06"},{"v":0.000579,"d":"5.79E-04"},null,"GO:0031167","rRNA methylation",23,8,4.55,0.0029,0.193245]
["GO:0030154","cell differentiation",987,159,117.16,1.73E-3,0.119981,null,"GO:0034599","cellular response to oxidative stress",64,19,11.88,0.00566,0.366069,null,"GO:0051607","defense response to virus",57,23,9.66,{"v":1e-05,"d":"1.00E-05"},{"v":0.000694,"d":"6.94E-04"},null,"GO:0048366","leaf development",444,128,87.93,0.00309,0.196025]
["GO:0019219","regulation of nucleobase-containing compound metabolic process",2319,261,275.28,1.9E-3,0.125105,null,"GO:0006879","intracellular iron ion homeostasis",20,9,3.71,0.00599,0.376343,null,"GO:0009266","response to temperature stimulus",1142,352,193.59,{"v":1.2E-5,"d":"1.20E-05"},{"v":0.000808,"d":"8.08E-04"},null,"GO:0001666","response to hypoxia",225,70,44.56,0.00312,0.196025]
["GO:0000272","polysaccharide catabolic process",72,22,8.55,1.91E-3,0.125105,null,"GO:0034605","cellular response to heat",69,22,12.81,0.00681,0.408093,null,"GO:0009738","abscisic acid-activated signaling pathway",229,78,38.82,{"v":1.3e-05,"d":"1.30E-05"},{"v":0.000851,"d":"8.51E-04"},null,"GO:0048581","negative regulation of post-embryonic development",103,31,20.4,0.00343,0.206231]
["GO:0009793","embryo development ending in seed dormancy",654,104,77.63,0.00212,0.131202,null,"GO:0010020","chloroplast fission",24,10,4.45,0.00736,0.408093,null,"GO:0009637","response to blue light",162,60,27.46,{"v":1.4E-5,"d":"1.40E-05"},{"v":8.92E-4,"d":"8.92E-04"},null,"GO:0010218","response to far red light",34,14,6.73,3.47E-3,0.206231]
["GO:0006260","DNA replication",148,46,17.57,0.00213,0.131202,null,"GO:0016115","terpenoid catabolic process",14,7,2.6,7.6E-3,0.408093,null,"GO:0010162","seed dormancy process",53,20,8.98,{"v":2.1e-05,"d":"2.10E-05"},0.001303,null,"GO:0016558","protein import into peroxisome matrix",12,7,2.38,0.00367,0.212377]
["GO:0016998","cell wall macromolecule catabolic process",17,7,2.02,0.00217,0.131202,null,"GO:0046395","carboxylic acid catabolic process",137,40,25.43,0.00782,0.408093,null,"GO:0071215","cellular response to abscisic acid stimulus",291,102,49.33,{"v":2.9E-5,"d":"2.90E-05"},1.753E-3,null,"GO:0010152","pollen maturation",15,8,2.97,3.96E-3,0.223283]
["GO:0006526","arginine biosynthetic process",13,6,1.54,0.00227,0.133817,null,"GO:0098869","cellular oxidant detoxification",21,10,3.9,0.00794,0.408093,null,"GO:0045892","negative regulation of DNA-templated transcription",171,50,28.99,{"v":3.8e-05,"d":"3.80E-05"},0.00224,null,"GO:0006970","response to osmotic stress",786,220,155.66,0.00456,0.250686]
["GO:0000076","DNA replication checkpoint signaling",16,6,1.9,0.00243,0.139755,null,"GO:0009098","leucine biosynthetic process",11,6,2.04,0.00798,0.408093,null,"GO:0097305","response to alcohol",1127,401,191.04,{"v":4e-05,"d":"4.00E-05"},2.251E-3,null,"GO:2000241","regulation of reproductive process",470,136,93.08,4.79E-3,0.253078]
["GO:1900376","regulation of secondary metabolite biosynthetic process",22,8,2.61,0.00267,0.149901,null,"GO:0071484","cellular response to light intensity",11,6,2.04,0.00798,0.408093,null,"GO:0032787","monocarboxylic acid metabolic process",651,153,110.35,{"v":4.1E-5,"d":"4.10E-05"},2.251E-3,null,"GO:0000122","negative regulation of transcription by RNA polymerase II",25,11,4.95,0.0051,0.253078]
["GO:0000462","maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)",37,11,4.39,0.0029,0.159028,null,"GO:0016998","cell wall macromolecule catabolic process",11,6,2.04,0.00798,0.408093,null,"GO:0010114","response to red light",91,33,15.43,{"v":4.2e-05,"d":"4.20E-05"},2.251E-3,null,"GO:0006096","glycolytic process",39,15,7.72,0.00544,0.253078]
["GO:0000463","maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)",18,7,2.14,0.00319,0.170955,null,"GO:0009615","response to virus",77,23,14.29,0.00837,0.413412,null,"GO:0071484","cellular response to light intensity",13,9,2.2,{"v":4.2e-05,"d":"4.20E-05"},2.251E-3,null,"GO:0009648","photoperiodism",255,90,50.5,0.00549,0.253078]
["GO:0009629","response to gravity",96,19,11.4,0.0035,0.174885,null,"GO:0044248","cellular catabolic process",1323,296,245.53,0.00846,0.413412,null,"GO:0007165","signal transduction",1906,451,323.1,{"v":4.6E-5,"d":"4.60E-05"},0.00241,null,"GO:0009851","auxin biosynthetic process",21,9,4.16,0.00603,0.253078]
["GO:0006325","chromatin organization",277,35,32.88,0.00352,0.174885,null,"GO:0006508","proteolysis",623,140,115.62,0.00876,0.418766,null,"GO:0019752","carboxylic acid metabolic process",1365,299,231.39,{"v":6.6e-05,"d":"6.60E-05"},0.003383,null,"GO:0006102","isocitrate metabolic process",10,6,1.98,0.00603,0.253078]
["GO:1902969","mitotic DNA replication",10,5,1.19,0.00353,0.174885,null,"GO:0071456","cellular response to hypoxia",166,43,30.81,0.01161,0.541126,null,"GO:0009889","regulation of biosynthetic process",2279,483,386.33,{"v":9.3e-05,"d":"9.30E-05"},4.666E-3,null,"GO:0018216","peptidyl-arginine methylation",10,6,1.98,0.00603,0.253078]
["GO:0045491","xylan metabolic process",38,10,4.51,0.00356,0.174885,null,"GO:0006541","glutamine metabolic process",15,7,2.78,0.01199,0.541126,null,"GO:0042594","response to starvation",176,57,29.83,{"v":1E-4,"d":"1.00E-04"},0.004812,null,"GO:0033356","UDP-L-arabinose metabolic process",10,6,1.98,0.00603,0.253078]
["GO:0009888","tissue development",1609,242,191,3.79E-3,0.182384,null,"GO:0030163","protein catabolic process",506,116,93.91,0.01207,0.541126,null,"GO:0009617","response to bacterium",1004,259,170.19,{"v":1E-4,"d":"1.00E-04"},0.004812,null,"GO:0010928","regulation of auxin mediated signaling pathway",30,13,5.94,0.00616,0.253078]
["GO:0051726","regulation of cell cycle",232,39,27.54,0.00475,0.217912,null,"GO:0030003","intracellular monoatomic cation homeostasis",121,31,22.46,0.01234,0.541126,null,"GO:0010150","leaf senescence",258,73,43.73,{"v":1.1E-4,"d":"1.10E-04"},0.004894,null,"GO:0010468","regulation of gene expression",2563,641,507.57,0.00619,0.253078]
["GO:0042343","indole glucosinolate metabolic process",34,10,4.04,0.00484,0.217912,null,"GO:0002213","defense response to insect",47,16,8.72,0.01255,0.541126,null,"GO:2000241","regulation of reproductive process",499,116,84.59,{"v":1.1E-4,"d":"1.10E-04"},0.004894,null,"GO:0010228","vegetative to reproductive phase transition of meristem",411,128,81.39,0.00633,0.253078]
["GO:0007049","cell cycle",780,138,92.59,0.00486,0.217912,null,"GO:0006952","defense response",1566,312,290.63,0.01311,0.554402,null,"GO:0002237","response to molecule of bacterial origin",105,32,17.8,{"v":1.1E-4,"d":"1.10E-04"},0.004894,null,"GO:0140352","export from cell",110,36,21.78,0.00637,0.253078]
["GO:0032543","mitochondrial translation",29,9,3.44,0.00501,0.217912,null,"GO:0010033","response to organic substance",2951,643,547.67,0.0143,0.583549,null,"GO:0042542","response to hydrogen peroxide",62,23,10.51,{"v":1.1E-4,"d":"1.10E-04"},0.004894,null,"GO:0009313","oligosaccharide catabolic process",16,8,3.17,6.45E-3,0.253078]
["GO:0061077","chaperone-mediated protein folding",57,17,6.77,5.28E-3,0.217912,null,"GO:0035266","meristem growth",68,11,12.62,0.01433,0.583549,null,"GO:0071483","cellular response to blue light",39,18,6.61,{"v":1.2E-4,"d":"1.20E-04"},0.00524,null,"GO:0019750","chloroplast localization",21,7,4.16,0.00646,0.253078]
["GO:0010026","trichome differentiation",79,14,9.38,0.00536,0.217912,null,"GO:0009620","response to fungus",646,130,119.89,0.01492,0.588233,null,"GO:0006833","water transport",33,15,5.59,{"v":0.00013,"d":"1.30E-04"},0.005474,null,"GO:0055082","intracellular chemical homeostasis",158,41,31.29,0.00648,0.253078]
["GO:0052544","defense response by callose deposition in cell wall",15,6,1.78,0.00536,0.217912,null,"GO:2000022","regulation of jasmonic acid mediated signaling pathway",30,11,5.57,0.01498,0.588233,null,"GO:0009648","photoperiodism",273,78,46.28,{"v":0.00013,"d":"1.30E-04"},0.005474,null,"GO:0071712","ER-associated misfolded protein catabolic process",16,8,3.17,0.00655,0.253078]
["GO:0006271","DNA strand elongation involved in DNA replication",15,6,1.78,0.00536,0.217912,null,"GO:0009699","phenylpropanoid biosynthetic process",44,17,8.17,0.01779,0.6586,null,"GO:0042631","cellular response to water deprivation",30,14,5.09,{"v":0.00015,"d":"1.50E-04"},0.006205,null,"GO:1902531","regulation of intracellular signal transduction",40,15,7.92,0.00656,0.253078]
["GO:0010600","regulation of auxin biosynthetic process",15,6,1.78,0.00536,0.217912,null,"GO:0006515","protein quality control for misfolded or incompletely synthesized proteins",32,10,5.94,0.01796,0.6586,null,"GO:1901575","organic substance catabolic process",1599,415,271.05,{"v":2.9E-4,"d":"2.90E-04"},0.01159,null,"GO:0010565","regulation of cellular ketone metabolic process",96,30,19.01,0.00705,0.264625]
["GO:0007005","mitochondrion organization",173,36,20.54,0.00575,0.229805,null,"GO:0046185","aldehyde catabolic process",16,7,2.97,0.01796,0.6586,null,"GO:0009966","regulation of signal transduction",389,101,65.94,{"v":2.9E-4,"d":"2.90E-04"},0.01159,null,"GO:0071396","cellular response to lipid",697,177,138.03,0.0071,0.264625]
["GO:0009130","pyrimidine nucleoside monophosphate biosynthetic process",16,7,1.9,0.00607,0.23464,null,"GO:0032259","methylation",197,21,36.56,0.01797,0.6586,null,"GO:0046512","sphingosine biosynthetic process",10,7,1.7,{"v":0.0003,"d":"3.00E-04"},0.011597,null,"GO:0009737","response to abscisic acid",852,212,168.73,0.00802,0.293933]
["GO:0042026","protein refolding",35,10,4.15,0.00607,0.23464,null,"GO:0042545","cell wall modification",78,16,14.48,0.01871,0.665375,null,"GO:0007035","vacuolar acidification",10,7,1.7,{"v":0.0003,"d":"3.00E-04"},0.011597,null,"GO:0009966","regulation of signal transduction",345,102,68.32,0.00884,0.318146]
["GO:0006457","protein folding",174,42,20.66,0.00741,0.281819,null,"GO:0071215","cellular response to abscisic acid stimulus",256,60,47.51,0.01876,0.665375,null,"GO:0015996","chlorophyll catabolic process",39,16,6.61,{"v":3.3E-4,"d":"3.30E-04"},0.012551,null,"GO:0051707","response to other organism",1590,378,314.88,0.00897,0.318146]
["GO:0006633","fatty acid biosynthetic process",146,35,17.33,0.0077,0.287381,null,"GO:0009753","response to jasmonic acid",394,86,73.12,0.02028,0.707869,null,"GO:0036211","protein modification process",1901,344,322.25,{"v":0.00038,"d":"3.80E-04"},0.014223,null,"GO:0008284","positive regulation of cell population proliferation",20,9,3.96,0.0093,0.324009]
["GO:0043085","positive regulation of catalytic activity",71,9,8.43,0.0078,0.287381,null,"GO:0009693","ethylene biosynthetic process",20,8,3.71,0.02104,0.712088,null,"GO:0042128","nitrate assimilation",13,8,2.2,{"v":0.00039,"d":"3.90E-04"},0.014369,null,"GO:0009553","embryo sac development",114,31,22.58,0.00943,0.324009]
["GO:0051085","chaperone cofactor-dependent protein refolding",42,11,4.99,0.00833,0.297698,null,"GO:0009704","de-etiolation",13,6,2.41,0.02115,0.712088,null,"GO:0010286","heat acclimation",62,22,10.51,{"v":0.00041,"d":"4.10E-04"},0.014648,null,"GO:0045229","external encapsulating structure organization",202,38,40,0.01003,0.339323]
["GO:0016554","cytidine to uridine editing",21,7,2.49,0.00845,0.297698,null,"GO:0009062","fatty acid catabolic process",44,12,8.17,0.02196,0.712088,null,"GO:0006623","protein targeting to vacuole",36,15,6.1,{"v":0.00041,"d":"4.10E-04"},0.014648,null,"GO:0002183","cytoplasmic translational initiation",17,8,3.37,0.01025,0.341511]
["GO:0048532","anatomical structure arrangement",135,27,16.03,0.0087,0.297698,null,"GO:0009838","abscission",16,6,2.97,0.02198,0.712088,null,"GO:0016036","cellular response to phosphate starvation",63,22,10.68,{"v":0.00043,"d":"4.30E-04"},0.015133,null,"GO:0032922","circadian regulation of gene expression",11,6,2.18,0.01107,0.342858]
["GO:0010158","abaxial cell fate specification",12,5,1.42,0.00905,0.297698,null,"GO:0006206","pyrimidine nucleobase metabolic process",16,4,2.97,0.02202,0.712088,null,"GO:0009723","response to ethylene",215,62,36.45,{"v":0.00052,"d":"5.20E-04"},0.018032,null,"GO:0010120","camalexin biosynthetic process",11,6,2.18,0.01107,0.342858]
["GO:0006189","de novo' IMP biosynthetic process",12,5,1.42,0.00905,0.297698,null,"GO:0009407","toxin catabolic process",24,9,4.45,0.02302,0.731695,null,"GO:0009646","response to absence of light",48,18,8.14,{"v":0.00053,"d":"5.30E-04"},0.018112,null,"GO:0090110","COPII-coated vesicle cargo loading",11,6,2.18,0.01107,0.342858]
["GO:0009684","indoleacetic acid biosynthetic process",12,5,1.42,0.00905,0.297698,null,"GO:0046113","nucleobase catabolic process",10,5,1.86,0.02415,0.731695,null,"GO:0034605","cellular response to heat",75,25,12.71,{"v":0.00055,"d":"5.50E-04"},0.018527,null,"GO:0051177","meiotic sister chromatid cohesion",11,6,2.18,0.01107,0.342858]
["GO:0002182","cytoplasmic translational elongation",12,5,1.42,0.00905,0.297698,null,"GO:0071265","L-methionine biosynthetic process",10,5,1.86,0.02415,0.731695,null,"GO:0005985","sucrose metabolic process",36,17,6.1,{"v":0.00059,"d":"5.90E-04"},0.019595,null,"GO:0000338","protein deneddylation",11,6,2.18,0.01107,0.342858]
["GO:0043933","protein-containing complex organization",594,72,70.51,0.00909,0.297698,null,"GO:0009809","lignin biosynthetic process",28,10,5.2,0.02418,0.731695,null,"GO:0010205","photoinhibition",11,7,1.86,{"v":0.0007,"d":"7.00E-04"},0.022925,null,"GO:0035556","intracellular signal transduction",307,81,60.8,0.01171,0.352744]
["GO:0016053","organic acid biosynthetic process",592,106,70.27,0.00986,0.317693,null,"GO:1901615","organic hydroxy compound metabolic process",270,53,50.11,0.02429,0.731695,null,"GO:0009642","response to light intensity",345,115,58.48,{"v":0.00071,"d":"7.10E-04"},0.022934,null,"GO:1990961","xenobiotic detoxification by transmembrane export across the plasma membrane",24,10,4.75,0.01171,0.352744]
["GO:0090558","plant epidermis development",505,76,59.95,0.00997,0.317693,null,"GO:0006749","glutathione metabolic process",32,11,5.94,0.02475,0.735476,null,"GO:1902074","response to salt",1211,467,205.28,{"v":0.00073,"d":"7.30E-04"},0.023261,null,"GO:0044248","cellular catabolic process",1323,333,262,0.01203,0.357486]
["GO:0010675","regulation of cellular carbohydrate metabolic process",53,13,6.29,0.0107,0.336408,null,"GO:0042744","hydrogen peroxide catabolic process",21,8,3.9,0.02858,0.837966,null,"GO:1901361","organic cyclic compound catabolic process",300,73,50.85,{"v":0.00088,"d":"8.80E-04"},0.027667,null,"GO:0048364","root development",689,172,136.45,0.01283,0.376176]
["GO:0009682","induced systemic resistance",22,7,2.61,0.01115,0.345943,null,"GO:0071310","cellular response to organic substance",1258,232,233.47,0.02989,0.864844,null,"GO:0051453","regulation of intracellular pH",28,16,4.75,0.00126,0.038892,null,"GO:0006006","glucose metabolic process",41,17,8.12,0.01334,0.383697]
["GO:0009658","chloroplast organization",219,35,26,0.0117,0.355816,null,"GO:0043094","cellular metabolic compound salvage",70,15,12.99,0.03138,0.896164,null,"GO:0009649","entrainment of circadian clock",18,9,3.05,0.00127,0.038892,null,"GO:0009909","regulation of flower development",134,41,26.54,0.01354,0.383697]
["GO:0071669","plant-type cell wall organization or biogenesis",460,76,54.61,0.01177,0.355816,null,"GO:0051336","regulation of hydrolase activity",66,15,12.25,0.0344,0.921688,null,"GO:1990961","xenobiotic detoxification by transmembrane export across the plasma membrane",32,13,5.42,1.31E-3,0.039602,null,"GO:0050793","regulation of developmental process",1122,285,222.2,0.01361,0.383697]
["GO:0048639","positive regulation of developmental growth",13,5,1.54,0.01328,0.383904,null,"GO:0030162","regulation of proteolysis",38,8,7.05,0.03445,0.921688,null,"GO:0009063","amino acid catabolic process",82,26,13.9,0.00163,0.048652,null,"GO:0010150","leaf senescence",226,63,44.76,0.01405,0.391088]
["GO:0006458","de novo' protein folding",47,14,5.58,0.01376,0.383904,null,"GO:0008202","steroid metabolic process",49,10,9.09,0.03445,0.921688,null,"GO:0042430","indole-containing compound metabolic process",146,34,24.75,0.00171,0.050402,null,"GO:0051173","positive regulation of nitrogen compound metabolic process",562,139,111.3,0.01488,0.409014]
["GO:0006221","pyrimidine nucleotide biosynthetic process",32,11,3.8,0.01378,0.383904,null,"GO:0006511","ubiquitin-dependent protein catabolic process",386,76,71.64,0.03464,0.921688,null,"GO:0006355","regulation of DNA-templated transcription",1705,370,289.02,0.00176,0.051236,null,"GO:0043200","response to amino acid",18,8,3.56,0.0153,0.415367]
["GO:0016049","cell growth",563,91,66.83,0.01395,0.383904,null,"GO:0006536","glutamate metabolic process",18,7,3.34,0.03553,0.921688,null,"GO:0042440","pigment metabolic process",379,91,64.25,0.00188,0.054061,null,"GO:0006418","tRNA aminoacylation for protein translation",47,16,9.31,0.0155,0.415665]
["GO:0000154","rRNA modification",37,11,4.39,0.01402,0.383904,null,"GO:0006744","ubiquinone biosynthetic process",18,7,3.34,0.03553,0.921688,null,"GO:0019915","lipid storage",19,9,3.22,0.00206,0.058524,null,"GO:0051171","regulation of nitrogen compound metabolic process",2391,593,473.51,0.01603,0.422413]
["GO:0051702","biological process involved in interaction with symbiont",71,5,8.43,0.01416,0.383904,null,"GO:0010243","response to organonitrogen compound",144,30,26.72,0.03671,0.921688,null,"GO:0009645","response to low light intensity stimulus",30,12,5.09,0.00234,0.065687,null,"GO:0010073","meristem maintenance",144,42,28.52,0.01617,0.422413]
["GO:0010015","root morphogenesis",523,75,62.08,0.01431,0.383904,null,"GO:0006672","ceramide metabolic process",24,8,4.45,0.03759,0.921688,null,"GO:2000243","positive regulation of reproductive process",55,16,9.32,0.00258,0.071572,null,"GO:0045787","positive regulation of cell cycle",31,8,6.14,0.01636,0.422413]
["GO:0043255","regulation of carbohydrate biosynthetic process",52,11,6.17,0.0144,0.383904,null,"GO:0009065","glutamine family amino acid catabolic process",11,5,2.04,0.03762,0.921688,null,"GO:0055062","phosphate ion homeostasis",20,9,3.39,0.00319,0.087465,null,"GO:0002237","response to molecule of bacterial origin",75,23,14.85,0.01652,0.422413]
["GO:0000027","ribosomal large subunit assembly",23,7,2.73,0.01442,0.383904,null,"GO:0009625","response to insect",11,5,2.04,0.03762,0.921688,null,"GO:0010119","regulation of stomatal movement",98,31,16.61,3.31E-3,0.088491,null,"GO:0009968","negative regulation of signal transduction",88,25,17.43,0.01697,0.426806]
["GO:0009625","response to insect",23,7,2.73,0.01442,0.383904,null,"GO:0080092","regulation of pollen tube growth",22,8,4.08,0.03781,0.921688,null,"GO:0019439","aromatic compound catabolic process",277,66,46.96,3.31E-3,0.088491,null,"GO:1900056","negative regulation of leaf senescence",15,7,2.97,0.01708,0.426806]
["GO:0042762","regulation of sulfur metabolic process",28,9,3.32,0.01449,0.383904,null,"GO:0016051","carbohydrate biosynthetic process",284,50,52.71,0.03793,0.921688,null,"GO:1901606","alpha-amino acid catabolic process",77,24,13.05,0.00334,0.088491,null,"GO:0045935","positive regulation of nucleobase-containing compound metabolic process",396,95,78.42,0.01806,0.429492]
["GO:0071103","DNA conformation change",34,12,4.04,0.01511,0.390095,null,"GO:0009813","flavonoid biosynthetic process",66,17,12.25,0.03845,0.921688,null,"GO:0034644","cellular response to UV",17,8,2.88,0.00385,0.10087,null,"GO:0006402","mRNA catabolic process",101,28,20,0.01833,0.429492]
["GO:0000470","maturation of LSU-rRNA",27,11,3.21,0.01511,0.390095,null,"GO:0006082","organic acid metabolic process",1487,330,275.97,0.0386,0.921688,null,"GO:0098771","inorganic ion homeostasis",206,52,34.92,0.004,0.103648,null,"GO:0048575","short-day photoperiodism, flowering",12,6,2.38,0.01847,0.429492]
["GO:0048878","chemical homeostasis",356,27,42.26,0.01522,0.390095,null,"GO:0045037","protein import into chloroplast stroma",30,10,5.57,0.03891,0.921688,null,"GO:0098542","defense response to other organism",1702,426,288.51,0.00406,0.10406,null,"GO:0010225","response to UV-C",12,6,2.38,0.01847,0.429492]
["GO:0034654","nucleobase-containing compound biosynthetic process",2245,269,266.5,0.01686,0.427483,null,"GO:0009651","response to salt stress",537,112,99.66,0.03898,0.921688,null,"GO:0009788","negative regulation of abscisic acid-activated signaling pathway",52,17,8.81,4.13E-3,0.104715,null,"GO:0140014","mitotic nuclear division",59,15,11.68,0.01847,0.429492]
["GO:0001708","cell fate specification",36,12,4.27,0.01816,0.454652,null,"GO:0010224","response to UV-B",51,15,9.47,0.04005,0.931219,null,"GO:0009787","regulation of abscisic acid-activated signaling pathway",119,41,20.17,0.00457,0.114639,null,"GO:0031669","cellular response to nutrient levels",130,33,25.74,0.01864,0.429492]
["GO:0071555","cell wall organization",218,49,25.88,0.01835,0.454652,null,"GO:0044550","secondary metabolite biosynthetic process",165,52,30.62,0.04023,0.931219,null,"GO:0031669","cellular response to nutrient levels",157,47,26.61,0.00487,0.119567,null,"GO:0000288","nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay",33,10,6.54,0.01874,0.429492]
["GO:0005975","carbohydrate metabolic process",775,109,92,0.01851,0.454652,null,"GO:0044093","positive regulation of molecular function",72,17,13.36,0.0439,1,null,"GO:0009688","abscisic acid biosynthetic process",24,11,4.07,0.00494,0.119567,null,"GO:0016571","histone methylation",49,13,9.7,0.01875,0.429492]
["GO:0006749","glutathione metabolic process",41,10,4.87,0.01919,0.466495,null,"GO:0010608","post-transcriptional regulation of gene expression",183,28,33.96,0.04441,1,null,"GO:0016236","macroautophagy",40,11,6.78,4.96E-3,0.119567,null,"GO:0045893","positive regulation of DNA-templated transcription",276,69,54.66,0.01926,0.436626]
["GO:0006414","translational elongation",47,14,5.58,0.02045,0.478073,null,"GO:0009642","response to light intensity",281,70,52.15,0.04639,1,null,"GO:0010200","response to chitin",11,6,1.86,0.00502,0.119567,null,"GO:0097305","response to alcohol",942,238,186.55,0.02028,0.455058]
["GO:0009617","response to bacterium",1004,88,119.18,0.02047,0.478073,null,"GO:0008652","amino acid biosynthetic process",159,39,29.51,0.04707,1,null,"GO:0009643","photosynthetic acclimation",11,6,1.86,0.00502,0.119567,null,"GO:0055088","lipid homeostasis",37,13,7.33,0.02121,0.471119]
["GO:0080022","primary root development",30,8,3.56,0.02068,0.478073,null,"GO:0019852","L-ascorbic acid metabolic process",19,5,3.53,0.04745,1,null,"GO:0006914","autophagy",82,27,13.9,0.00524,0.123559,null,"GO:0009630","gravitropism",65,21,12.87,0.02149,0.472565]
["GO:0009407","toxin catabolic process",30,8,3.56,0.02068,0.478073,null,"GO:0019752","carboxylic acid metabolic process",1135,244,210.64,0.04837,1,null,"GO:0042752","regulation of circadian rhythm",62,23,10.51,0.00576,0.133106,null,"GO:2000067","regulation of root morphogenesis",16,7,3.17,0.02526,0.549968]
["GO:0080156","mitochondrial mRNA modification",30,8,3.56,0.02068,0.478073,null,"GO:0009415","response to water",953,244,176.87,0.05185,1,null,"GO:0071472","cellular response to salt stress",37,13,6.27,0.00586,0.133106,null,"GO:0036211","protein modification process",1669,378,330.53,0.02576,0.555355]
["GO:0000724","double-strand break repair via homologous recombination",90,23,10.68,0.02138,0.489457,null,"GO:0090615","mitochondrial mRNA processing",12,5,2.23,0.05487,1,null,"GO:0006900","vesicle budding from membrane",41,12,6.95,0.00591,0.133106,null,"GO:1903047","mitotic cell cycle process",133,33,26.34,0.02632,0.561919]
["GO:2000104","negative regulation of DNA-templated DNA replication",10,4,1.19,0.02304,0.512531,null,"GO:0055070","copper ion homeostasis",12,5,2.23,0.05487,1,null,"GO:0042538","hyperosmotic salinity response",58,18,9.83,0.00597,0.133106,null,"GO:0046777","protein autophosphorylation",129,35,25.55,0.02666,0.563705]
["GO:0006545","glycine biosynthetic process",10,4,1.19,0.02304,0.512531,null,"GO:0051262","protein tetramerization",12,5,2.23,0.05487,1,null,"GO:0033993","response to lipid",2216,617,375.65,0.00601,0.133106,null,"GO:0006807","nitrogen compound metabolic process",7947,1692,1573.81,0.02803,0.583142]
["GO:0043462","regulation of ATP-dependent activity",10,4,1.19,0.02304,0.512531,null,"GO:0006636","unsaturated fatty acid biosynthetic process",16,6,2.97,0.05992,1,null,"GO:0048573","photoperiodism, flowering",203,52,34.41,0.00603,0.133106,null,"GO:0009911","positive regulation of flower development",27,10,5.35,0.02844,0.583142]
["GO:0009718","anthocyanin-containing compound biosynthetic process",34,8,4.04,0.0247,0.525379,null,"GO:0009889","regulation of biosynthetic process",1878,308,348.54,0.06131,1,null,"GO:0035556","intracellular signal transduction",353,78,59.84,0.00604,0.133106,null,"GO:0044275","cellular carbohydrate catabolic process",38,15,7.53,0.02846,0.583142]
["GO:0009944","polarity specification of adaxial/abaxial axis",20,6,2.37,0.02472,0.525379,null,"GO:0009083","branched-chain amino acid catabolic process",20,7,3.71,0.06175,1,null,"GO:0032870","cellular response to hormone stimulus",1095,284,185.62,0.0065,0.141917,null,"GO:0080186","developmental vegetative growth",13,6,2.57,0.02864,0.583142]
["GO:0000162","tryptophan biosynthetic process",20,6,2.37,0.02472,0.525379,null,"GO:0019761","glucosinolate biosynthetic process",50,14,9.28,0.0671,1,null,"GO:0009789","positive regulation of abscisic acid-activated signaling pathway",46,15,7.8,0.00703,0.150698,null,"GO:0042343","indole glucosinolate metabolic process",20,8,3.96,0.03034,0.595693]
["GO:0006275","regulation of DNA replication",44,16,5.22,0.02503,0.525379,null,"GO:0045491","xylan metabolic process",24,7,4.45,0.06773,1,null,"GO:0010218","response to far red light",46,15,7.8,0.00703,0.150698,null,"GO:0006094","gluconeogenesis",20,8,3.96,0.03034,0.595693]
["GO:0006563","L-serine metabolic process",30,9,3.56,0.02522,0.525379,null,"GO:0009880","embryonic pattern specification",20,6,3.71,0.06775,1,null,"GO:0010189","vitamin E biosynthetic process",15,7,2.54,0.00724,0.153801,null,"GO:0006012","galactose metabolic process",20,8,3.96,0.03034,0.595693]
["GO:0031425","chloroplast RNA processing",25,8,2.97,0.02524,0.525379,null,"GO:2000030","regulation of response to red or far red light",44,7,8.17,0.06802,1,null,"GO:0051173","positive regulation of nitrogen compound metabolic process",636,153,107.81,0.0074,0.155796,null,"GO:0006833","water transport",20,8,3.96,0.03034,0.595693]
["GO:0042793","plastid transcription",15,5,1.78,0.02533,0.525379,null,"GO:0007165","signal transduction",1607,276,298.24,0.06903,1,null,"GO:0043069","negative regulation of programmed cell death",30,11,5.09,0.00763,0.159217,null,"GO:0006000","fructose metabolic process",10,5,1.98,0.03147,0.60704]
["GO:0050658","RNA transport",52,6,6.17,0.0254,0.525379,null,"GO:0045490","pectin catabolic process",33,10,6.12,0.07093,1,null,"GO:0032958","inositol phosphate biosynthetic process",12,6,2.03,8.6E-3,0.174817,null,"GO:0001709","cell fate determination",10,5,1.98,0.03147,0.60704]
["GO:0009695","jasmonic acid biosynthetic process",26,7,3.09,0.02822,0.578633,null,"GO:0043086","negative regulation of catalytic activity",29,9,5.38,0.07397,1,null,"GO:0032922","circadian regulation of gene expression",12,6,2.03,8.6E-3,0.174817,null,"GO:0044786","cell cycle DNA replication",44,13,8.71,0.03213,0.614381]
["GO:0009826","unidimensional cell growth",343,51,40.72,0.02977,0.598219,null,"GO:0019748","secondary metabolic process",370,103,68.67,0.07545,1,null,"GO:0006020","inositol metabolic process",12,6,2.03,8.6E-3,0.174817,null,"GO:0010311","lateral root formation",39,13,7.72,0.03281,0.621358]
["GO:0032875","regulation of DNA endoreduplication",32,8,3.8,0.03003,0.598219,null,"GO:0010038","response to metal ion",159,40,29.51,0.0756,1,null,"GO:0009891","positive regulation of biosynthetic process",434,109,73.57,0.00892,0.179772,null,"GO:0098771","inorganic ion homeostasis",172,43,34.06,0.03306,0.621358]
["GO:0010089","xylem development",32,8,3.8,0.03003,0.598219,null,"GO:0009970","cellular response to sulfate starvation",13,5,2.41,0.07595,1,null,"GO:0046903","secretion",72,19,12.21,0.00921,0.182695,null,"GO:0042273","ribosomal large subunit biogenesis",74,19,14.65,0.03401,0.633797]
["GO:0015995","chlorophyll biosynthetic process",96,18,11.4,0.03019,0.598219,null,"GO:0070542","response to fatty acid",417,95,77.39,0.07645,1,null,"GO:0071218","cellular response to misfolded protein",22,9,3.73,0.00922,0.182695,null,"GO:0048278","vesicle docking",28,10,5.55,0.03572,0.65861]
["GO:0009934","regulation of meristem structural organization",21,6,2.49,0.03122,0.613473,null,"GO:0042548","regulation of photosynthesis, light reaction",25,8,4.64,0.07657,1,null,"GO:0009638","phototropism",23,9,3.9,0.00957,0.186514,null,"GO:0032774","RNA biosynthetic process",1645,429,325.77,0.0362,0.65861]
["GO:1905392","plant organ morphogenesis",737,113,87.49,0.03189,0.62146,null,"GO:1902074","response to salt",1016,257,188.56,0.078,1,null,"GO:0032507","maintenance of protein location in cell",24,6,4.07,0.00964,0.186514,null,"GO:0031326","regulation of cellular biosynthetic process",1785,458,353.5,0.03624,0.65861]
["GO:0032042","mitochondrial DNA metabolic process",11,4,1.31,0.03287,0.622811,null,"GO:0009395","phospholipid catabolic process",17,6,3.16,0.07856,1,null,"GO:0000288","nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay",33,7,5.59,0.00965,0.186514,null,"GO:0009736","cytokinin-activated signaling pathway",46,17,9.11,0.03807,0.673825]
["GO:0009262","deoxyribonucleotide metabolic process",11,4,1.31,0.03287,0.622811,null,"GO:0045910","negative regulation of DNA recombination",17,6,3.16,0.07856,1,null,"GO:0010193","response to ozone",27,10,4.58,0.00997,0.191132,null,"GO:0019319","hexose biosynthetic process",22,10,4.36,0.0391,0.673825]
["GO:0048589","developmental growth",1058,150,125.59,0.03323,0.622811,null,"GO:0006098","pentose-phosphate shunt",28,7,5.2,0.07868,1,null,"GO:0071310","cellular response to organic substance",1507,388,255.46,0.01054,0.199204,null,"GO:0016131","brassinosteroid metabolic process",14,7,2.77,0.03914,0.673825]
["GO:0052546","cell wall pectin metabolic process",32,8,3.8,0.03327,0.622811,null,"GO:0045814","negative regulation of gene expression, epigenetic",52,9,9.65,0.07881,1,null,"GO:0009744","response to sucrose",70,20,11.87,0.01056,0.199204,null,"GO:0080050","regulation of seed development",21,6,4.16,0.0392,0.673825]
["GO:0051240","positive regulation of multicellular organismal process",93,15,11.04,0.03328,0.622811,null,"GO:1901606","alpha-amino acid catabolic process",64,19,11.88,0.07939,1,null,"GO:0010227","floral organ abscission",16,7,2.71,0.01101,0.201618,null,"GO:1905037","autophagosome organization",31,5,6.14,0.03928,0.673825]
["GO:0043086","negative regulation of catalytic activity",33,8,3.92,0.03565,0.65371,null,"GO:0048638","regulation of developmental growth",211,43,39.16,0.08122,1,null,"GO:0016119","carotene metabolic process",16,7,2.71,0.01101,0.201618,null,"GO:0009891","positive regulation of biosynthetic process",355,92,70.3,0.04072,0.673825]
["GO:0006351","DNA-templated transcription",1935,217,229.7,0.03586,0.65371,null,"GO:0033108","mitochondrial respiratory chain complex assembly",39,14,7.24,0.08157,1,null,"GO:0019253","reductive pentose-phosphate cycle",16,7,2.71,0.01101,0.201618,null,"GO:0031667","response to nutrient levels",184,51,36.44,0.04118,0.673825]
["GO:0048364","root development",964,143,114.43,0.036,0.65371,null,"GO:0042759","long-chain fatty acid biosynthetic process",26,7,4.83,0.08192,1,null,"GO:0048586","regulation of long-day photoperiodism, flowering",26,8,4.41,0.01103,0.201618,null,"GO:0009738","abscisic acid-activated signaling pathway",205,56,40.6,0.04153,0.673825]
["GO:0009314","response to radiation",2075,199,246.32,0.03604,0.65371,null,"GO:0006829","zinc ion transport",16,5,2.97,0.08193,1,null,"GO:0010029","regulation of seed germination",89,28,15.09,0.01184,0.214759,null,"GO:0000956","nuclear-transcribed mRNA catabolic process",61,18,12.08,0.04174,0.673825]
["GO:0009832","plant-type cell wall biogenesis",238,36,28.25,0.03736,0.67248,null,"GO:0060548","negative regulation of cell death",34,6,6.31,0.0821,1,null,"GO:0009657","plastid organization",293,57,49.67,0.01233,0.220375,null,"GO:0000919","cell plate assembly",14,6,2.77,0.04191,0.673825]
["GO:0071367","cellular response to brassinosteroid stimulus",67,18,7.95,0.03861,0.679803,null,"GO:1901699","cellular response to nitrogen compound",39,6,7.24,0.08217,1,null,"GO:0010492","maintenance of shoot apical meristem identity",20,8,3.39,0.0124,0.220375,null,"GO:0080036","regulation of cytokinin-activated signaling pathway",14,6,2.77,0.04191,0.673825]
["GO:0051050","positive regulation of transport",22,6,2.61,0.03874,0.679803,null,"GO:1903313","positive regulation of mRNA metabolic process",59,8,10.95,0.0823,1,null,"GO:0031349","positive regulation of defense response",98,20,16.61,0.01243,0.220375,null,"GO:0043328","protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorti...",14,6,2.77,0.04191,0.673825]
["GO:0090627","plant epidermal cell differentiation",195,25,23.15,0.03887,0.679803,null,"GO:0009628","response to abiotic stimulus",3381,730,627.48,0.08354,1,null,"GO:0006995","cellular response to nitrogen starvation",28,10,4.75,0.0132,0.232281,null,"GO:0006108","malate metabolic process",14,6,2.77,0.04191,0.673825]
["GO:2001251","negative regulation of chromosome organization",13,3,1.54,0.03892,0.679803,null,"GO:0006869","lipid transport",65,17,12.06,0.08426,1,null,"GO:0044242","cellular lipid catabolic process",97,31,16.44,0.01347,0.234104,null,"GO:0036260","RNA capping",14,6,2.77,0.04191,0.673825]
["GO:0010114","response to red light",91,16,10.8,0.03947,0.681238,null,"GO:0043436","oxoacid metabolic process",1403,308,260.38,0.08789,1,null,"GO:0031146","SCF-dependent proteasomal ubiquitin-dependent protein catabolic process",58,17,9.83,0.01358,0.234104,null,"GO:0010540","basipetal auxin transport",14,6,2.77,0.04191,0.673825]
["GO:0032774","RNA biosynthetic process",1976,220,234.57,0.03958,0.681238,null,"GO:0048868","pollen tube development",166,39,30.81,0.08821,1,null,"GO:0006560","proline metabolic process",13,6,2.2,0.01371,0.234104,null,"GO:0002239","response to oomycetes",45,11,8.91,0.04198,0.673825]
["GO:0009116","nucleoside metabolic process",23,6,2.73,0.04039,0.684494,null,"GO:0009738","abscisic acid-activated signaling pathway",205,44,38.05,0.08843,1,null,"GO:0005986","sucrose biosynthetic process",13,6,2.2,0.01371,0.234104,null,"GO:0009606","tropism",106,35,20.99,0.04533,0.715408]
["GO:0046189","phenol-containing compound biosynthetic process",27,5,3.21,0.04046,0.684494,null,"GO:0046467","membrane lipid biosynthetic process",82,18,15.22,0.09044,1,null,"GO:0090693","plant organ senescence",299,86,50.69,0.0138,0.234104,null,"GO:0090567","reproductive shoot system development",479,131,94.86,0.04614,0.715408]
["GO:0006767","water-soluble vitamin metabolic process",64,6,7.6,0.04064,0.684494,null,"GO:0071398","cellular response to fatty acid",136,26,25.24,0.09057,1,null,"GO:0009873","ethylene-activated signaling pathway",66,19,11.19,0.01491,0.250517,null,"GO:0006890","retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum",29,10,5.74,0.04626,0.715408]
["GO:0009956","radial pattern formation",28,7,3.32,0.04122,0.689339,null,"GO:0006760","folic acid-containing compound metabolic process",31,6,5.75,0.0906,1,null,"GO:0006749","glutathione metabolic process",41,13,6.95,0.01498,0.250517,null,"GO:0009627","systemic acquired resistance",55,15,10.89,0.04627,0.715408]
["GO:0019941","modification-dependent protein catabolic process",408,20,48.43,0.04208,0.698765,null,"GO:0070988","demethylation",42,8,7.79,0.0906,1,null,"GO:0071705","nitrogen compound transport",745,128,126.29,0.01517,0.251907,null,"GO:0016036","cellular response to phosphate starvation",53,16,10.5,0.04704,0.715408]
["GO:0006222","UMP biosynthetic process",12,4,1.42,0.04478,0.729516,null,"GO:0009943","adaxial/abaxial axis specification",21,4,3.9,0.09061,1,null,"GO:0090333","regulation of stomatal closure",37,12,6.27,0.01584,0.255577,null,"GO:0009097","isoleucine biosynthetic process",11,5,2.18,0.04847,0.715408]
["GO:0006949","syncytium formation",12,4,1.42,0.04478,0.729516,null,"GO:0034284","response to monosaccharide",65,8,12.06,0.09087,1,null,"GO:0009773","photosynthetic electron transport in photosystem I",17,7,2.88,0.01603,0.255577,null,"GO:0009051","pentose-phosphate shunt, oxidative branch",11,5,2.18,0.04847,0.715408]
["GO:0007062","sister chromatid cohesion",39,6,4.63,0.04486,0.729516,null,"GO:0006721","terpenoid metabolic process",154,34,28.58,0.093,1,null,"GO:0051017","actin filament bundle assembly",17,7,2.88,0.01603,0.255577,null,"GO:0042128","nitrate assimilation",11,5,2.18,0.04847,0.715408]
["GO:0048527","lateral root development",112,19,13.3,0.04869,0.786377,null,"GO:1901700","response to oxygen-containing compound",2288,520,424.63,0.09301,1,null,"GO:1900057","positive regulation of leaf senescence",17,7,2.88,0.01603,0.255577,null,"GO:0000479","endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)",11,5,2.18,0.04847,0.715408]
["GO:0051302","regulation of cell division",62,12,7.36,0.05239,0.831195,null,"GO:0006950","response to stress",3799,841,705.05,0.09618,1,null,"GO:0007034","vacuolar transport",103,35,17.46,0.01623,0.255577,null,"GO:0031053","primary miRNA processing",11,5,2.18,0.04847,0.715408]
["GO:0060560","developmental growth involved in morphogenesis",426,65,50.57,0.05326,0.831195,null,"GO:0043648","dicarboxylic acid metabolic process",76,20,14.1,0.09641,1,null,"GO:0000184","nuclear-transcribed mRNA catabolic process, nonsense-mediated decay",10,5,1.7,0.01657,0.255577,null,"GO:0016973","poly(A)+ mRNA export from nucleus",11,5,2.18,0.04847,0.715408]
["GO:0009955","adaxial/abaxial pattern specification",42,11,4.99,0.05328,0.831195,null,"GO:0046149","pigment catabolic process",46,14,8.54,0.09646,1,null,"GO:0006545","glycine biosynthetic process",10,5,1.7,0.01657,0.255577,null,"GO:0055062","phosphate ion homeostasis",18,7,3.56,0.0488,0.715408]
["GO:2000904","regulation of starch metabolic process",18,5,2.14,0.05358,0.831195,null,"GO:0033617","mitochondrial cytochrome c oxidase assembly",10,4,1.86,0.09681,1,null,"GO:0071324","cellular response to disaccharide stimulus",10,5,1.7,0.01657,0.255577,null,"GO:0009585","red, far-red light phototransduction",18,7,3.56,0.0488,0.715408]
["GO:0042761","very long-chain fatty acid biosynthetic process",18,5,2.14,0.05358,0.831195,null,"GO:0019430","removal of superoxide radicals",10,4,1.86,0.09681,1,null,"GO:0034389","lipid droplet organization",10,5,1.7,0.01657,0.255577,null,"GO:0009892","negative regulation of metabolic process",857,211,169.72,0.05055,0.729376]
["GO:0009641","shade avoidance",18,5,2.14,0.05358,0.831195,null,"GO:0010072","primary shoot apical meristem specification",10,4,1.86,0.09681,1,null,"GO:2000379","positive regulation of reactive oxygen species metabolic process",10,5,1.7,0.01657,0.255577,null,"GO:1902074","response to salt",1016,254,201.21,0.05168,0.729376]
["GO:0009699","phenylpropanoid biosynthetic process",66,12,7.83,0.05749,0.847165,null,"GO:0031667","response to nutrient levels",184,42,34.15,0.10005,1,null,"GO:0006887","exocytosis",46,13,7.8,0.0166,0.255577,null,"GO:0009640","photomorphogenesis",97,27,19.21,0.05206,0.729376]
["GO:0009958","positive gravitropism",30,7,3.56,0.05758,0.847165,null,"GO:0060586","multicellular organismal-level iron ion homeostasis",18,6,3.34,0.10007,1,null,"GO:1903506","regulation of nucleic acid-templated transcription",1740,381,294.96,0.01674,0.255577,null,"GO:0051094","positive regulation of developmental process",101,34,20,0.05226,0.729376]
["GO:0042435","indole-containing compound biosynthetic process",94,25,11.16,0.05762,0.847165,null,"GO:0016119","carotene metabolic process",18,6,3.34,0.10007,1,null,"GO:0140352","export from cell",130,36,22.04,0.0168,0.255577,null,"GO:0034470","ncRNA processing",397,112,78.62,0.05253,0.729376]
["GO:0006626","protein targeting to mitochondrion",51,13,6.05,0.05838,0.847165,null,"GO:0055075","potassium ion homeostasis",14,5,2.6,0.10075,1,null,"GO:0006636","unsaturated fatty acid biosynthetic process",21,8,3.56,0.01711,0.257578,null,"GO:0007165","signal transduction",1607,408,318.25,0.05315,0.729376]
["GO:0042304","regulation of fatty acid biosynthetic process",13,4,1.54,0.05878,0.847165,null,"GO:0009060","aerobic respiration",102,20,18.93,0.10092,1,null,"GO:0071395","cellular response to jasmonic acid stimulus",164,39,27.8,0.01715,0.257578,null,"GO:0071705","nitrogen compound transport",694,170,137.44,0.05395,0.729376]
["GO:1901403","positive regulation of tetrapyrrole metabolic process",13,4,1.54,0.05878,0.847165,null,"GO:0015994","chlorophyll metabolic process",180,42,33.41,0.102,1,null,"GO:0051603","proteolysis involved in protein catabolic process",472,103,80.01,0.01756,0.262066,null,"GO:0044743","protein transmembrane import into intracellular organelle",46,13,9.11,0.05436,0.729376]
["GO:0019856","pyrimidine nucleobase biosynthetic process",13,4,1.54,0.05878,0.847165,null,"GO:0043604","amide biosynthetic process",623,69,115.62,0.10526,1,null,"GO:0001666","response to hypoxia",271,107,45.94,0.01789,0.265312,null,"GO:0010104","regulation of ethylene-activated signaling pathway",23,8,4.55,0.05439,0.729376]
["GO:0010586","miRNA metabolic process",13,4,1.54,0.05878,0.847165,null,"GO:0065008","regulation of biological quality",408,70,75.72,0.10922,1,null,"GO:0090421","embryonic meristem initiation",18,8,3.05,0.01865,0.273733,null,"GO:0000041","transition metal ion transport",52,12,10.3,0.05449,0.729376]
["GO:0006782","protoporphyrinogen IX biosynthetic process",13,4,1.54,0.05878,0.847165,null,"GO:0048510","regulation of timing of transition from vegetative to reproductive phase",27,8,5.01,0.11208,1,null,"GO:0009902","chloroplast relocation",17,6,2.88,0.01869,0.273733,null,"GO:0031109","microtubule polymerization or depolymerization",25,5,4.95,0.05459,0.729376]
["GO:0010315","auxin export across the plasma membrane",13,4,1.54,0.05878,0.847165,null,"GO:0008152","metabolic process",10217,1790,1896.16,0.11287,1,null,"GO:0033036","macromolecule localization",933,169,158.16,0.02009,0.291008,null,"GO:1901698","response to nitrogen compound",191,51,37.83,0.05497,0.729376]
["GO:0046112","nucleobase biosynthetic process",21,7,2.49,0.05893,0.847165,null,"GO:0044282","small molecule catabolic process",183,51,33.96,0.11293,1,null,"GO:0045927","positive regulation of growth",38,11,6.44,0.02058,0.291008,null,"GO:0051453","regulation of intracellular pH",26,9,5.15,0.05596,0.729376]
["GO:0016571","histone methylation",53,8,6.29,0.05913,0.847165,null,"GO:0015996","chlorophyll catabolic process",36,10,6.68,0.1159,1,null,"GO:0009696","salicylic acid metabolic process",40,11,6.78,0.02059,0.291008,null,"GO:0051252","regulation of RNA metabolic process",1670,441,330.72,0.05623,0.729376]
["GO:0006955","immune response",245,26,29.08,0.05928,0.847165,null,"GO:0019760","glucosinolate metabolic process",132,34,24.5,0.12175,1,null,"GO:0010117","photoprotection",14,6,2.37,0.02061,0.291008,null,"GO:0042773","ATP synthesis coupled electron transport",48,12,9.51,0.05637,0.729376]
["GO:0019760","glucosinolate metabolic process",211,48,25.05,0.0701,0.983231,null,"GO:0009751","response to salicylic acid",221,42,41.02,0.12291,1,null,"GO:0048015","phosphatidylinositol-mediated signaling",14,6,2.37,0.02061,0.291008,null,"GO:0006458","de novo' protein folding",46,7,9.11,0.0566,0.729376]
["GO:0033260","nuclear DNA replication",14,7,1.66,0.0715,0.983231,null,"GO:0009267","cellular response to starvation",113,29,20.97,0.12295,1,null,"GO:0005992","trehalose biosynthetic process",14,6,2.37,0.02061,0.291008,null,"GO:0010029","regulation of seed germination",81,27,16.04,0.05737,0.729376]
["GO:0009685","gibberellin metabolic process",26,6,3.09,0.07165,0.983231,null,"GO:0048609","multicellular organismal reproductive process",170,41,31.55,0.12327,1,null,"GO:0042548","regulation of photosynthesis, light reaction",29,14,4.92,0.02226,0.312435,null,"GO:0071472","cellular response to salt stress",30,10,5.94,0.05749,0.729376]
["GO:0072350","tricarboxylic acid metabolic process",14,4,1.66,0.07169,0.983231,null,"GO:0009845","seed germination",157,33,29.14,0.12343,1,null,"GO:0010183","pollen tube guidance",26,9,4.41,0.02269,0.31504,null,"GO:0016226","iron-sulfur cluster assembly",30,10,5.94,0.05749,0.729376]
["GO:1901463","regulation of tetrapyrrole biosynthetic process",31,6,3.68,0.07169,0.983231,null,"GO:0022900","electron transport chain",94,23,17.45,0.12369,1,null,"GO:0006536","glutamate metabolic process",22,8,3.73,0.02298,0.31504,null,"GO:0010628","positive regulation of gene expression",58,17,11.49,0.0577,0.729376]
["GO:0071941","nitrogen cycle metabolic process",17,4,2.02,0.07171,0.983231,null,"GO:0043455","regulation of secondary metabolic process",51,15,9.47,0.12382,1,null,"GO:0009612","response to mechanical stimulus",22,8,3.73,0.02298,0.31504,null,"GO:0006099","tricarboxylic acid cycle",42,13,8.32,0.05781,0.729376]
["GO:0048826","cotyledon morphogenesis",18,4,2.14,0.07172,0.983231,null,"GO:2000034","regulation of seed maturation",19,5,3.53,0.12414,1,null,"GO:0009959","negative gravitropism",22,8,3.73,0.02298,0.31504,null,"GO:0032787","monocarboxylic acid metabolic process",530,129,104.96,0.05787,0.729376]
["GO:0032776","DNA methylation on cytosine",14,4,1.66,0.07482,0.996755,null,"GO:0045047","protein targeting to ER",36,7,6.68,0.12426,1,null,"GO:0010565","regulation of cellular ketone metabolic process",119,31,20.17,0.02448,0.333664,null,"GO:0009266","response to temperature stimulus",958,208,189.72,0.05836,0.729376]
["GO:0035999","tetrahydrofolate interconversion",14,4,1.66,0.07482,0.996755,null,"GO:0019953","sexual reproduction",99,18,18.37,0.12434,1,null,"GO:0046165","alcohol biosynthetic process",71,31,12.04,0.02563,0.345796,null,"GO:0002098","tRNA wobble uridine modification",15,6,2.97,0.05846,0.729376]
["GO:0006448","regulation of translational elongation",14,4,1.66,0.07482,0.996755,null,"GO:0010030","positive regulation of seed germination",19,6,3.53,0.12434,1,null,"GO:0055085","transmembrane transport",674,140,114.25,0.02588,0.345796,null,"GO:0006360","transcription by RNA polymerase I",15,6,2.97,0.05846,0.729376]
["GO:1902584","positive regulation of response to water deprivation",14,4,1.66,0.07482,0.996755,null,"GO:0022603","regulation of anatomical structure morphogenesis",119,22,22.09,0.12477,1,null,"GO:0051651","maintenance of location in cell",45,13,7.63,0.02612,0.345796,null,"GO:0009084","glutamine family amino acid biosynthetic process",28,7,5.55,0.05859,0.729376]
["GO:0045039","protein insertion into mitochondrial inner membrane",14,4,1.66,0.07482,0.996755,null,"GO:0009850","auxin metabolic process",44,8,8.17,0.12479,1,null,"GO:0009051","pentose-phosphate shunt, oxidative branch",11,5,1.86,0.02621,0.345796,null,"GO:0040008","regulation of growth",269,53,53.27,0.05874,0.729376]
["GO:0045036","protein targeting to chloroplast",54,12,6.41,0.07922,1,null,"GO:0071482","cellular response to light stimulus",149,34,27.65,0.12715,1,null,"GO:0006814","sodium ion transport",11,5,1.86,0.02621,0.345796,null,"GO:0043161","proteasome-mediated ubiquitin-dependent protein catabolic process",203,62,40.2,0.05904,0.729376]
["GO:0009965","leaf morphogenesis",103,18,12.23,0.07962,1,null,"GO:0046686","response to cadmium ion",55,14,10.21,0.12787,1,null,"GO:0002833","positive regulation of response to biotic stimulus",89,17,15.09,0.02625,0.345796,null,"GO:1901565","organonitrogen compound catabolic process",885,203,175.26,0.06089,0.74595]
["GO:0006334","nucleosome assembly",26,6,3.09,0.07963,1,null,"GO:0007049","cell cycle",569,60,105.6,0.12849,1,null,"GO:0070588","calcium ion transmembrane transport",44,13,7.46,0.02701,0.353831,null,"GO:0080090","regulation of primary metabolic process",2454,608,485.98,0.06106,0.74595]
["GO:0043414","macromolecule methylation",189,30,22.44,0.08049,1,null,"GO:0010109","regulation of photosynthesis",43,13,7.98,0.1286,1,null,"GO:0006470","protein dephosphorylation",146,49,24.75,0.02789,0.36334,null,"GO:0071215","cellular response to abscisic acid stimulus",256,71,50.7,0.06297,0.758243]
["GO:0034440","lipid oxidation",57,11,6.77,0.08082,1,null,"GO:0006629","lipid metabolic process",1005,196,186.52,0.12884,1,null,"GO:0071489","cellular response to red or far red light",57,19,9.66,0.02858,0.364441,null,"GO:1905393","plant organ formation",89,30,17.63,0.06355,0.758243]
["GO:0010104","regulation of ethylene-activated signaling pathway",25,7,2.97,0.08084,1,null,"GO:0009084","glutamine family amino acid biosynthetic process",28,8,5.2,0.12894,1,null,"GO:0048017","inositol lipid-mediated signaling",16,8,2.71,0.02866,0.364441,null,"GO:0008104","protein localization",641,159,126.94,0.06378,0.758243]
["GO:0031167","rRNA methylation",23,6,2.73,0.08091,1,null,"GO:0006360","transcription by RNA polymerase I",15,5,2.78,0.12903,1,null,"GO:0009895","negative regulation of catabolic process",21,8,3.56,0.02867,0.364441,null,"GO:0048443","stamen development",59,17,11.68,0.06426,0.758243]
["GO:0000466","maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)",20,4,2.37,0.08107,1,null,"GO:0080163","regulation of protein serine/threonine phosphatase activity",15,5,2.78,0.12903,1,null,"GO:0051238","sequestering of metal ion",12,4,2.03,0.02872,0.364441,null,"GO:0010229","inflorescence development",19,7,3.76,0.06448,0.758243]
["GO:1901699","cellular response to nitrogen compound",47,5,5.58,0.08129,1,null,"GO:2000142","regulation of DNA-templated transcription initiation",11,4,2.04,0.13063,1,null,"GO:1905037","autophagosome organization",32,6,5.42,0.02875,0.364441,null,"GO:0010030","positive regulation of seed germination",19,7,3.76,0.06448,0.758243]
["GO:0071214","cellular response to abiotic stimulus",255,27,30.27,0.08155,1,null,"GO:0010120","camalexin biosynthetic process",11,4,2.04,0.13063,1,null,"GO:0032501","multicellular organismal process",4317,717,731.8,0.02916,0.364441,null,"GO:0010492","maintenance of shoot apical meristem identity",19,7,3.76,0.06448,0.758243]
["GO:0009790","embryo development",711,114,84.4,0.08291,1,null,"GO:0034389","lipid droplet organization",11,4,2.04,0.13063,1,null,"GO:0009750","response to fructose",15,6,2.54,0.02952,0.364441,null,"GO:0031347","regulation of defense response",556,126,110.11,0.06548,0.761971]
["GO:0071695","anatomical structure maturation",311,41,36.92,0.08726,1,null,"GO:0043605","amide catabolic process",11,4,2.04,0.13063,1,null,"GO:1903426","regulation of reactive oxygen species biosynthetic process",15,6,2.54,0.02952,0.364441,null,"GO:0010224","response to UV-B",51,15,10.1,0.06549,0.761971]
["GO:0010075","regulation of meristem growth",60,11,7.12,0.09239,1,null,"GO:1900376","regulation of secondary metabolite biosynthetic process",11,4,2.04,0.13063,1,null,"GO:0016115","terpenoid catabolic process",15,6,2.54,0.02952,0.364441,null,"GO:0009832","plant-type cell wall biogenesis",176,39,34.85,0.06773,0.765493]
["GO:0006535","cysteine biosynthetic process from serine",15,4,1.78,0.09281,1,null,"GO:0000038","very long-chain fatty acid metabolic process",23,6,4.27,0.13066,1,null,"GO:0046685","response to arsenic-containing substance",15,6,2.54,0.02952,0.364441,null,"GO:0080022","primary root development",23,8,4.55,0.06794,0.765493]
["GO:0006620","post-translational protein targeting to endoplasmic reticulum membrane",15,4,1.78,0.09281,1,null,"GO:1901264","carbohydrate derivative transport",46,7,8.54,0.13111,1,null,"GO:0050826","response to freezing",23,8,3.9,0.03014,0.370157,null,"GO:0022618","ribonucleoprotein complex assembly",120,23,23.76,0.06843,0.765493]
["GO:0016115","terpenoid catabolic process",15,4,1.78,0.09281,1,null,"GO:0030968","endoplasmic reticulum unfolded protein response",28,8,5.2,0.13266,1,null,"GO:0009785","blue light signaling pathway",19,7,3.22,0.03049,0.371203,null,"GO:0006520","amino acid metabolic process",435,94,86.15,0.06894,0.765493]
["GO:0008033","tRNA processing",95,12,11.28,0.09301,1,null,"GO:0065003","protein-containing complex assembly",475,107,88.15,0.1345,1,null,"GO:0034614","cellular response to reactive oxygen species",31,8,5.25,0.03054,0.371203,null,"GO:0016071","mRNA metabolic process",491,108,97.24,0.06916,0.765493]
["GO:0006465","signal peptide processing",21,5,2.49,0.09469,1,null,"GO:0006518","peptide metabolic process",597,64,110.8,0.13761,1,null,"GO:0031647","regulation of protein stability",36,13,6.1,0.03228,0.388172,null,"GO:1901605","alpha-amino acid metabolic process",292,58,57.83,0.06987,0.765493]
["GO:0015979","photosynthesis",249,28,29.56,0.10229,1,null,"GO:0009266","response to temperature stimulus",958,252,177.79,0.13783,1,null,"GO:0006865","amino acid transport",51,12,8.65,0.03241,0.388172,null,"GO:0071035","nuclear polyadenylation-dependent rRNA catabolic process",12,5,2.38,0.0699,0.765493]
["GO:0052543","callose deposition in cell wall",25,9,2.97,0.10539,1,null,"GO:0032981","mitochondrial respiratory chain complex I assembly",24,7,4.45,0.14176,1,null,"GO:0031330","negative regulation of cellular catabolic process",19,6,3.22,0.03243,0.388172,null,"GO:0042753","positive regulation of circadian rhythm",12,5,2.38,0.0699,0.765493]
["GO:0043648","dicarboxylic acid metabolic process",82,13,9.73,0.10572,1,null,"GO:0030433","ubiquitin-dependent ERAD pathway",42,11,7.79,0.1418,1,null,"GO:0009664","plant-type cell wall organization",143,25,24.24,0.03264,0.388713,null,"GO:0031126","sno(s)RNA 3'-end processing",12,5,2.38,0.0699,0.765493]
["GO:1901658","glycosyl compound catabolic process",25,6,2.97,0.10575,1,null,"GO:0016485","protein processing",52,14,9.65,0.14357,1,null,"GO:0009615","response to virus",89,33,15.09,0.03322,0.393632,null,"GO:0006949","syncytium formation",12,5,2.38,0.0699,0.765493]
["GO:2000030","regulation of response to red or far red light",47,8,5.58,0.10583,1,null,"GO:0009639","response to red or far red light",299,57,55.49,0.14725,1,null,"GO:0009626","plant-type hypersensitive response",68,16,11.53,0.03532,0.416423,null,"GO:0016132","brassinosteroid biosynthetic process",12,5,2.38,0.0699,0.765493]
["GO:0080001","mucilage extrusion from seed coat",10,3,1.19,0.1059,1,null,"GO:0005985","sucrose metabolic process",32,10,5.94,0.15082,1,null,"GO:0044270","cellular nitrogen compound catabolic process",253,57,42.89,0.03584,0.419678,null,"GO:0031331","positive regulation of cellular catabolic process",87,19,17.23,0.06997,0.765493]
["GO:0010239","chloroplast mRNA processing",10,3,1.19,0.1059,1,null,"GO:0050826","response to freezing",20,6,3.71,0.15117,1,null,"GO:0042592","homeostatic process",411,102,69.67,0.03608,0.419678,null,"GO:0048825","cotyledon development",31,10,6.14,0.07036,0.765949]
["GO:0051176","positive regulation of sulfur metabolic process",10,3,1.19,0.1059,1,null,"GO:0016554","cytidine to uridine editing",20,6,3.71,0.15117,1,null,"GO:0051239","regulation of multicellular organismal process",626,137,106.12,0.03613,0.419678,null,"GO:0009620","response to fungus",646,164,127.93,0.07459,0.807997]
["GO:0030308","negative regulation of cell growth",10,3,1.19,0.1059,1,null,"GO:0009627","systemic acquired resistance",55,12,10.21,0.15521,1,null,"GO:0050821","protein stabilization",28,9,4.75,0.03656,0.422591,null,"GO:0031047","RNA-mediated gene silencing",102,26,20.2,0.07805,0.822619]
["GO:0010582","floral meristem determinacy",10,3,1.19,0.1059,1,null,"GO:0009056","catabolic process",1719,387,319.03,0.15705,1,null,"GO:0008300","isoprenoid catabolic process",20,9,3.39,0.03702,0.423529,null,"GO:0015698","inorganic anion transport",48,13,9.51,0.07831,0.822619]
["GO:1902183","regulation of shoot apical meristem development",10,3,1.19,0.1059,1,null,"GO:0006873","intracellular monoatomic ion homeostasis",125,33,23.2,0.1582,1,null,"GO:0009313","oligosaccharide catabolic process",17,8,2.88,0.03704,0.423529,null,"GO:0006896","Golgi to vacuole transport",16,6,3.17,0.07838,0.822619]
["GO:1901002","positive regulation of response to salt stress",10,3,1.19,0.1059,1,null,"GO:0019395","fatty acid oxidation",44,11,8.17,0.1589,1,null,"GO:0042773","ATP synthesis coupled electron transport",47,9,7.97,0.03718,0.423529,null,"GO:0071333","cellular response to glucose stimulus",16,6,3.17,0.07838,0.822619]
["GO:0031048","RNA-mediated heterochromatin formation",10,3,1.19,0.1059,1,null,"GO:0009685","gibberellin metabolic process",19,6,3.53,0.15894,1,null,"GO:0009056","catabolic process",1879,492,318.52,0.0378,0.428521,null,"GO:0009642","response to light intensity",281,64,55.65,0.07852,0.822619]
["GO:0006880","intracellular sequestering of iron ion",10,3,1.19,0.1059,1,null,"GO:0051606","detection of stimulus",55,12,10.21,0.159,1,null,"GO:0010017","red or far-red light signaling pathway",52,15,8.81,0.03852,0.429311,null,"GO:0045892","negative regulation of DNA-templated transcription",143,41,28.32,0.07871,0.822619]
["GO:0007017","microtubule-based process",216,25,25.64,0.1062,1,null,"GO:0030198","extracellular matrix organization",14,4,2.6,0.15904,1,null,"GO:0006817","phosphate ion transport",25,10,4.24,0.03863,0.429311,null,"GO:0010556","regulation of macromolecule biosynthetic process",1618,425,320.43,0.07997,0.822619]
["GO:0045037","protein import into chloroplast stroma",28,6,3.32,0.10658,1,null,"GO:0022904","respiratory electron transport chain",52,11,9.65,0.15905,1,null,"GO:0030388","fructose 1,6-bisphosphate metabolic process",12,5,2.03,0.03878,0.429311,null,"GO:0006289","nucleotide-excision repair",40,12,7.92,0.08211,0.822619]
["GO:0010557","positive regulation of macromolecule biosynthetic process",358,35,42.5,0.10706,1,null,"GO:0071616","acyl-CoA biosynthetic process",21,4,3.9,0.15917,1,null,"GO:0046352","disaccharide catabolic process",12,5,2.03,0.03878,0.429311,null,"GO:0061640","cytoskeleton-dependent cytokinesis",44,13,8.71,0.0827,0.822619]
["GO:0090354","regulation of auxin metabolic process",20,8,2.37,0.10992,1,null,"GO:0046903","secretion",62,7,11.51,0.15964,1,null,"GO:0016558","protein import into peroxisome matrix",12,5,2.03,0.03878,0.429311,null,"GO:0098754","detoxification",90,22,17.82,0.08284,0.822619]
["GO:0051204","protein insertion into mitochondrial membrane",19,6,2.26,0.1101,1,null,"GO:0051248","negative regulation of protein metabolic process",93,10,17.26,0.15991,1,null,"GO:0022603","regulation of anatomical structure morphogenesis",134,21,22.72,0.03902,0.429949,null,"GO:0050826","response to freezing",20,7,3.96,0.08286,0.822619]
["GO:0090626","plant epidermis morphogenesis",98,14,11.63,0.11023,1,null,"GO:0019693","ribose phosphate metabolic process",192,24,35.63,0.16036,1,null,"GO:0043436","oxoacid metabolic process",1734,378,293.94,0.03937,0.431788,null,"GO:0010078","maintenance of root meristem identity",20,7,3.96,0.08286,0.822619]
["GO:0071398","cellular response to fatty acid",169,22,20.06,0.11027,1,null,"GO:1900426","positive regulation of defense response to bacterium",16,5,2.97,0.16044,1,null,"GO:0046686","response to cadmium ion",65,17,11.02,0.04004,0.433509,null,"GO:0007034","vacuolar transport",100,23,19.8,0.08292,0.822619]
["GO:0009185","ribonucleoside diphosphate metabolic process",54,5,6.41,0.11059,1,null,"GO:0071483","cellular response to blue light",33,7,6.12,0.16066,1,null,"GO:0043200","response to amino acid",20,7,3.39,0.04023,0.433509,null,"GO:0043666","regulation of phosphoprotein phosphatase activity",24,7,4.75,0.08301,0.822619]
["GO:0007276","gamete generation",57,5,6.77,0.11062,1,null,"GO:0009063","amino acid catabolic process",71,22,13.18,0.16562,1,null,"GO:0031056","regulation of histone modification",47,11,7.97,0.04027,0.433509,null,"GO:0032880","regulation of protein localization",24,6,4.75,0.08309,0.822619]
["GO:0045824","negative regulation of innate immune response",22,5,2.61,0.11115,1,null,"GO:0051607","defense response to virus",49,12,9.09,0.16699,1,null,"GO:0010115","regulation of abscisic acid biosynthetic process",16,6,2.71,0.04063,0.433509,null,"GO:0010118","stomatal movement",124,34,24.56,0.08398,0.822619]
["GO:0000103","sulfate assimilation",22,5,2.61,0.11115,1,null,"GO:0071470","cellular response to osmotic stress",42,10,7.79,0.16844,1,null,"GO:0046854","phosphatidylinositol phosphate biosynthetic process",16,6,2.71,0.04063,0.433509,null,"GO:0006406","mRNA export from nucleus",35,13,6.93,0.08451,0.822619]
["GO:0006399","tRNA metabolic process",158,24,18.76,0.11214,1,null,"GO:0032958","inositol phosphate biosynthetic process",12,4,2.23,0.16851,1,null,"GO:0006896","Golgi to vacuole transport",16,6,2.71,0.04063,0.433509,null,"GO:0009826","unidimensional cell growth",292,63,57.83,0.08465,0.822619]
["GO:0048564","photosystem I assembly",16,4,1.9,0.11264,1,null,"GO:1905156","negative regulation of photosynthesis",12,4,2.23,0.16851,1,null,"GO:0006096","glycolytic process",47,13,7.97,0.04492,0.476758,null,"GO:0016032","viral process",24,8,4.75,0.0849,0.822619]
["GO:0010105","negative regulation of ethylene-activated signaling pathway",16,4,1.9,0.11264,1,null,"GO:0010143","cutin biosynthetic process",12,4,2.23,0.16851,1,null,"GO:0015986","proton motive force-driven ATP synthesis",29,9,4.92,0.04529,0.476758,null,"GO:0010187","negative regulation of seed germination",24,8,4.75,0.0849,0.822619]
["GO:1900865","chloroplast RNA modification",16,4,1.9,0.11264,1,null,"GO:0098656","monoatomic anion transmembrane transport",12,4,2.23,0.16851,1,null,"GO:0070417","cellular response to cold",29,9,4.92,0.04529,0.476758,null,"GO:0006891","intra-Golgi vesicle-mediated transport",32,10,6.34,0.0849,0.822619]
["GO:0045168","cell-cell signaling involved in cell fate commitment",16,4,1.9,0.11264,1,null,"GO:0072348","sulfur compound transport",12,4,2.23,0.16851,1,null,"GO:0000302","response to reactive oxygen species",137,43,23.22,0.04732,0.495389,null,"GO:0009967","positive regulation of signal transduction",67,20,13.27,0.08491,0.822619]
["GO:0010497","plasmodesmata-mediated intercellular transport",16,4,1.9,0.11264,1,null,"GO:0005986","sucrose biosynthetic process",12,4,2.23,0.16851,1,null,"GO:0030003","intracellular monoatomic cation homeostasis",142,42,24.07,0.04748,0.495389,null,"GO:0015986","proton motive force-driven ATP synthesis",28,9,5.55,0.08541,0.822619]
["GO:0043067","regulation of programmed cell death",77,8,9.14,0.11314,1,null,"GO:0016558","protein import into peroxisome matrix",12,4,2.23,0.16851,1,null,"GO:0010118","stomatal movement",150,47,25.43,0.04881,0.507022,null,"GO:0030488","tRNA methylation",28,9,5.55,0.08541,0.822619]
["GO:0009825","multidimensional cell growth",35,7,4.15,0.11379,1,null,"GO:0010206","photosystem II repair",12,4,2.23,0.16851,1,null,"GO:0010431","seed maturation",94,31,15.93,0.04947,0.511624,null,"GO:0019222","regulation of metabolic process",3386,807,670.56,0.09107,0.822619]
["GO:0006810","transport",1968,187,233.62,0.11461,1,null,"GO:0050665","hydrogen peroxide biosynthetic process",12,4,2.23,0.16851,1,null,"GO:0098659","inorganic cation import across plasma membrane",19,7,3.22,0.05062,0.516393,null,"GO:0000003","reproduction",2213,492,438.26,0.09149,0.822619]
["GO:0044271","cellular nitrogen compound biosynthetic process",3399,531,403.49,0.11705,1,null,"GO:0045995","regulation of embryonic development",12,4,2.23,0.16851,1,null,"GO:0042398","cellular modified amino acid biosynthetic process",24,6,4.07,0.05072,0.516393,null,"GO:0006357","regulation of transcription by RNA polymerase II",272,70,53.87,0.09164,0.822619]
["GO:1901657","glycosyl compound metabolic process",241,56,28.61,0.11714,1,null,"GO:0000398","mRNA splicing, via spliceosome",214,46,39.72,0.16954,1,null,"GO:0006629","lipid metabolic process",1253,258,212.4,0.05173,0.516393,null,"GO:0009415","response to water",953,237,188.73,0.09447,0.822619]
["GO:0009559","embryo sac central cell differentiation",27,11,3.21,0.1183,1,null,"GO:0043562","cellular response to nitrogen levels",31,14,5.75,0.17126,1,null,"GO:0010109","regulation of photosynthesis",49,21,8.31,0.0533,0.516393,null,"GO:0090693","plant organ senescence",263,74,52.08,0.09527,0.822619]
["GO:0046040","IMP metabolic process",15,6,1.78,0.11851,1,null,"GO:0071214","cellular response to abiotic stimulus",215,48,39.9,0.17127,1,null,"GO:0071470","cellular response to osmotic stress",50,18,8.48,0.05397,0.516393,null,"GO:0032984","protein-containing complex disassembly",63,18,12.48,0.09533,0.822619]
["GO:0035670","plant-type ovary development",45,9,5.34,0.11855,1,null,"GO:0071241","cellular response to inorganic substance",24,5,4.45,0.17234,1,null,"GO:0051259","protein complex oligomerization",47,12,7.97,0.05398,0.516393,null,"GO:0006897","endocytosis",73,22,14.46,0.09535,0.822619]
["GO:0009173","pyrimidine ribonucleoside monophosphate metabolic process",13,5,1.54,0.11856,1,null,"GO:1901565","organonitrogen compound catabolic process",885,207,164.25,0.18314,1,null,"GO:0009071","serine family amino acid catabolic process",17,6,2.88,0.05405,0.516393,null,"GO:0046034","ATP metabolic process",73,27,14.46,0.09556,0.822619]
["GO:0051247","positive regulation of protein metabolic process",84,13,9.97,0.11858,1,null,"GO:0097237","cellular response to toxic substance",34,14,6.31,0.18512,1,null,"GO:0045828","positive regulation of isoprenoid metabolic process",17,6,2.88,0.05405,0.516393,null,"GO:0048508","embryonic meristem development",23,7,4.55,0.09568,0.822619]
["GO:0009147","pyrimidine nucleoside triphosphate metabolic process",19,5,2.26,0.1186,1,null,"GO:0033559","unsaturated fatty acid metabolic process",17,7,3.16,0.18538,1,null,"GO:0005983","starch catabolic process",17,6,2.88,0.05405,0.516393,null,"GO:0009970","cellular response to sulfate starvation",13,5,2.57,0.09568,0.822619]
["GO:0033559","unsaturated fatty acid metabolic process",22,5,2.61,0.11862,1,null,"GO:0099587","inorganic ion import across plasma membrane",17,5,3.16,0.18552,1,null,"GO:0048571","long-day photoperiodism",57,18,9.66,0.05406,0.516393,null,"GO:0007064","mitotic sister chromatid cohesion",13,5,2.57,0.09568,0.822619]
["GO:1902750","negative regulation of cell cycle G2/M phase transition",13,3,1.54,0.11867,1,null,"GO:0072524","pyridine-containing compound metabolic process",61,13,11.32,0.18553,1,null,"GO:0071365","cellular response to auxin stimulus",112,20,18.99,0.05421,0.516393,null,"GO:0006379","mRNA cleavage",13,5,2.57,0.09568,0.822619]
["GO:0045839","negative regulation of mitotic nuclear division",11,2,1.31,0.11872,1,null,"GO:0034204","lipid translocation",13,4,2.41,0.18554,1,null,"GO:1903008","organelle disassembly",31,10,5.25,0.05431,0.516393,null,"GO:0010375","stomatal complex patterning",13,5,2.57,0.09568,0.822619]
["GO:0051644","plastid localization",23,2,2.73,0.1188,1,null,"GO:0019363","pyridine nucleotide biosynthetic process",14,4,2.6,0.18555,1,null,"GO:0032984","protein-containing complex disassembly",68,16,11.53,0.05433,0.516393,null,"GO:0006857","oligopeptide transport",13,5,2.57,0.09568,0.822619]
["GO:0002376","immune system process",247,27,29.32,0.1189,1,null,"GO:0046471","phosphatidylglycerol metabolic process",11,3,2.04,0.18558,1,null,"GO:0009812","flavonoid metabolic process",174,36,29.5,0.0544,0.516393,null,"GO:0035970","peptidyl-threonine dephosphorylation",41,12,8.12,0.09607,0.822619]
["GO:0097237","cellular response to toxic substance",41,2,4.87,0.11893,1,null,"GO:1903825","organic acid transmembrane transport",46,9,8.54,0.18561,1,null,"GO:0032527","protein exit from endoplasmic reticulum",13,5,2.2,0.05444,0.516393,null,"GO:0009581","detection of external stimulus",26,10,5.15,0.09619,0.822619]
["GO:0000819","sister chromatid segregation",82,6,9.73,0.11898,1,null,"GO:1903052","positive regulation of proteolysis involved in protein catabolic process",25,5,4.64,0.18562,1,null,"GO:1990641","response to iron ion starvation",13,5,2.2,0.05444,0.516393,null,"GO:0009582","detection of abiotic stimulus",26,10,5.15,0.09619,0.822619]
["GO:0034050","programmed cell death induced by symbiont",69,3,8.19,0.11906,1,null,"GO:0034030","ribonucleoside bisphosphate biosynthetic process",34,6,6.31,0.18566,1,null,"GO:2000068","regulation of defense response to insect",13,5,2.2,0.05444,0.516393,null,"GO:0060147","regulation of post-transcriptional gene silencing",16,7,3.17,0.09628,0.822619]
["GO:0009834","plant-type secondary cell wall biogenesis",73,10,8.67,0.12097,1,null,"GO:0034033","purine nucleoside bisphosphate biosynthetic process",34,6,6.31,0.18566,1,null,"GO:0035435","phosphate ion transmembrane transport",13,5,2.2,0.05444,0.516393,null,"GO:0009308","amine metabolic process",84,19,16.64,0.0964,0.822619]
["GO:0030968","endoplasmic reticulum unfolded protein response",29,6,3.44,0.12161,1,null,"GO:0043903","regulation of biological process involved in symbiotic interaction",24,4,4.45,0.18567,1,null,"GO:0009970","cellular response to sulfate starvation",13,5,2.2,0.05444,0.516393,null,"GO:0060548","negative regulation of cell death",34,9,6.73,0.0964,0.822619]
["GO:0051179","localization",2324,221,275.88,0.12245,1,null,"GO:0071367","cellular response to brassinosteroid stimulus",53,9,9.84,0.1857,1,null,"GO:0006882","intracellular zinc ion homeostasis",13,5,2.2,0.05444,0.516393,null,"GO:0090421","embryonic meristem initiation",16,5,3.17,0.09644,0.822619]
["GO:0009828","plant-type cell wall loosening",23,5,2.73,0.12887,1,null,"GO:0098660","inorganic ion transmembrane transport",149,26,27.65,0.18576,1,null,"GO:0032103","positive regulation of response to external stimulus",91,17,15.43,0.05453,0.516393,null,"GO:2000026","regulation of multicellular organismal development",432,128,85.55,0.09645,0.822619]
["GO:0009693","ethylene biosynthetic process",23,5,2.73,0.12887,1,null,"GO:0009124","nucleoside monophosphate biosynthetic process",39,4,7.24,0.18586,1,null,"GO:0046777","protein autophosphorylation",148,33,25.09,0.05512,0.519892,null,"GO:0014070","response to organic cyclic compound",542,140,107.34,0.09677,0.822619]
["GO:0042274","ribosomal small subunit biogenesis",81,34,9.62,0.12994,1,null,"GO:0009812","flavonoid metabolic process",120,28,22.27,0.18719,1,null,"GO:0072583","clathrin-dependent endocytosis",26,8,4.41,0.06026,0.56461,null,"GO:0019752","carboxylic acid metabolic process",1135,261,224.77,0.09688,0.822619]
["GO:0045489","pectin biosynthetic process",59,11,7,0.13055,1,null,"GO:0009767","photosynthetic electron transport chain",35,9,6.5,0.18814,1,null,"GO:0030163","protein catabolic process",537,120,91.03,0.06034,0.56461,null,"GO:0042254","ribosome biogenesis",327,101,64.76,0.09884,0.822619]
["GO:1905428","regulation of plant organ formation",11,3,1.31,0.13329,1,null,"GO:0051179","localization",2078,329,385.65,0.19011,1,null,"GO:0009640","photomorphogenesis",106,21,17.97,0.06293,0.586518,null,"GO:0016579","protein deubiquitination",67,18,13.27,0.09968,0.822619]
["GO:0042436","indole-containing compound catabolic process",11,3,1.31,0.13329,1,null,"GO:0033993","response to lipid",1751,391,324.97,0.19287,1,null,"GO:0015994","chlorophyll metabolic process",220,56,37.29,0.06448,0.59213,null,"GO:0031325","positive regulation of cellular metabolic process",514,127,101.79,0.10045,0.822619]
["GO:0018216","peptidyl-arginine methylation",11,3,1.31,0.13329,1,null,"GO:0009657","plastid organization",275,56,51.04,0.19389,1,null,"GO:0046034","ATP metabolic process",82,25,13.9,0.06451,0.59213,null,"GO:0036293","response to decreased oxygen levels",230,72,45.55,0.10047,0.822619]
["GO:0000479","endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)",11,3,1.31,0.13329,1,null,"GO:0042430","indole-containing compound metabolic process",112,24,20.79,0.19427,1,null,"GO:0033500","carbohydrate homeostasis",29,10,4.92,0.06485,0.59213,null,"GO:0042430","indole-containing compound metabolic process",112,30,22.18,0.10091,0.822619]
["GO:0009636","response to toxic substance",133,18,15.79,0.1341,1,null,"GO:0006383","transcription by RNA polymerase III",26,7,4.83,0.19429,1,null,"GO:1901663","quinone biosynthetic process",34,8,5.76,0.06502,0.59213,null,"GO:0006163","purine nucleotide metabolic process",217,61,42.97,0.10102,0.822619]
["GO:0006298","mismatch repair",17,4,2.02,0.13414,1,null,"GO:0030150","protein import into mitochondrial matrix",26,7,4.83,0.19429,1,null,"GO:0010030","positive regulation of seed germination",22,7,3.73,0.06523,0.59213,null,"GO:0034504","protein localization to nucleus",50,25,9.9,0.10122,0.822619]
["GO:0043173","nucleotide salvage",17,4,2.02,0.13414,1,null,"GO:0009649","entrainment of circadian clock",17,5,3.16,0.19456,1,null,"GO:0010555","response to mannitol",22,7,3.73,0.06523,0.59213,null,"GO:0051170","import into nucleus",50,25,9.9,0.10122,0.822619]
["GO:0006241","CTP biosynthetic process",17,4,2.02,0.13414,1,null,"GO:0098781","ncRNA transcription",17,5,3.16,0.19456,1,null,"GO:0010224","response to UV-B",64,16,10.85,0.06529,0.59213,null,"GO:0071395","cellular response to jasmonic acid stimulus",133,30,26.34,0.10148,0.822619]
["GO:0007155","cell adhesion",17,4,2.02,0.13414,1,null,"GO:0042537","benzene-containing compound metabolic process",49,9,9.09,0.19497,1,null,"GO:1902600","proton transmembrane transport",31,9,5.25,0.06666,0.601915,null,"GO:2001006","regulation of cellulose biosynthetic process",17,6,3.37,0.10162,0.822619]
["GO:0015718","monocarboxylic acid transport",27,5,3.21,0.13418,1,null,"GO:0009058","biosynthetic process",4837,806,897.69,0.20078,1,null,"GO:0051246","regulation of protein metabolic process",342,58,57.97,0.06711,0.601915,null,"GO:0009956","radial pattern formation",17,6,3.37,0.10162,0.822619]
["GO:0010109","regulation of photosynthesis",49,6,5.82,0.13447,1,null,"GO:0000160","phosphorelay signal transduction system",75,16,13.92,0.20956,1,null,"GO:0006869","lipid transport",84,20,14.24,0.06725,0.601915,null,"GO:0021700","developmental maturation",276,61,54.66,0.10178,0.822619]
["GO:0045333","cellular respiration",127,14,15.08,0.13469,1,null,"GO:0030148","sphingolipid biosynthetic process",34,8,6.31,0.20963,1,null,"GO:0044550","secondary metabolite biosynthetic process",250,46,42.38,0.06739,0.601915,null,"GO:2000113","negative regulation of cellular macromolecule biosynthetic process",76,19,15.05,0.10194,0.822619]
["GO:0010078","maintenance of root meristem identity",30,6,3.56,0.13761,1,null,"GO:0016024","CDP-diacylglycerol biosynthetic process",13,4,2.41,0.20965,1,null,"GO:0061024","membrane organization",226,44,38.31,0.06957,0.608078,null,"GO:0010927","cellular component assembly involved in morphogenesis",27,9,5.35,0.10196,0.822619]
["GO:0042546","cell wall biogenesis",377,56,44.75,0.14222,1,null,"GO:0009074","aromatic amino acid family catabolic process",13,4,2.41,0.20965,1,null,"GO:0009395","phospholipid catabolic process",18,6,3.05,0.06984,0.608078,null,"GO:0042726","flavin-containing compound metabolic process",15,6,2.97,0.102,0.822619]
["GO:0043604","amide biosynthetic process",641,182,76.09,0.14234,1,null,"GO:0051347","positive regulation of transferase activity",13,4,2.41,0.20965,1,null,"GO:1900056","negative regulation of leaf senescence",18,6,3.05,0.06984,0.608078,null,"GO:0044247","cellular polysaccharide catabolic process",17,6,3.37,0.10202,0.822619]
["GO:0062012","regulation of small molecule metabolic process",171,20,20.3,0.14297,1,null,"GO:0046688","response to copper ion",13,4,2.41,0.20965,1,null,"GO:0046185","aldehyde catabolic process",18,6,3.05,0.06984,0.608078,null,"GO:0072595","maintenance of protein localization in organelle",14,5,2.77,0.10205,0.822619]
["GO:0043603","amide metabolic process",733,195,87.01,0.14396,1,null,"GO:0007155","cell adhesion",13,4,2.41,0.20965,1,null,"GO:0045935","positive regulation of nucleobase-containing compound metabolic process",462,109,78.32,0.07066,0.608078,null,"GO:0031125","rRNA 3'-end processing",14,5,2.77,0.10205,0.822619]
["GO:0048481","plant ovule development",44,8,5.22,0.14428,1,null,"GO:0140115","export across plasma membrane",48,7,8.91,0.21034,1,null,"GO:0042180","cellular ketone metabolic process",181,48,30.68,0.0717,0.608078,null,"GO:0046463","acylglycerol biosynthetic process",16,5,3.17,0.10208,0.822619]
["GO:0032502","developmental process",5204,684,617.75,0.147,1,null,"GO:1901575","organic substance catabolic process",1456,327,270.22,0.21093,1,null,"GO:0009867","jasmonic acid mediated signaling pathway",139,30,23.56,0.07225,0.608078,null,"GO:0051445","regulation of meiotic cell cycle",15,4,2.97,0.10213,0.822619]
["GO:0016126","sterol biosynthetic process",24,5,2.85,0.14779,1,null,"GO:0044087","regulation of cellular component biogenesis",77,14,14.29,0.212,1,null,"GO:0046149","pigment catabolic process",49,20,8.31,0.0727,0.608078,null,"GO:0046488","phosphatidylinositol metabolic process",67,13,13.27,0.10221,0.822619]
["GO:0006631","fatty acid metabolic process",279,53,33.12,0.14814,1,null,"GO:0035970","peptidyl-threonine dephosphorylation",41,10,7.61,0.21808,1,null,"GO:0072348","sulfur compound transport",14,5,2.37,0.07324,0.608078,null,"GO:0006766","vitamin metabolic process",86,14,17.03,0.10239,0.822619]
["GO:0044283","small molecule biosynthetic process",878,137,104.22,0.14857,1,null,"GO:0006778","porphyrin-containing compound metabolic process",225,52,41.76,0.2207,1,null,"GO:0043328","protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorti...",14,5,2.37,0.07324,0.608078,null,"GO:0007127","meiosis I",54,6,10.69,0.1025,0.822619]
["GO:0009165","nucleotide biosynthetic process",153,30,18.16,0.15149,1,null,"GO:0006787","porphyrin-containing compound catabolic process",45,13,8.35,0.22386,1,null,"GO:0005977","glycogen metabolic process",14,5,2.37,0.07324,0.608078,null,"GO:0072583","clathrin-dependent endocytosis",29,9,5.74,0.10302,0.823518]
["GO:0072527","pyrimidine-containing compound metabolic process",52,14,6.17,0.152,1,null,"GO:0042398","cellular modified amino acid biosynthetic process",22,4,4.08,0.22468,1,null,"GO:0010187","negative regulation of seed germination",27,8,4.58,0.07339,0.608078,null,"GO:0000398","mRNA splicing, via spliceosome",214,51,42.38,0.10349,0.823518]
["GO:0019395","fatty acid oxidation",48,8,5.7,0.15269,1,null,"GO:0044262","cellular carbohydrate metabolic process",283,51,52.52,0.22493,1,null,"GO:0052542","defense response by callose deposition",25,7,4.24,0.0734,0.608078,null,"GO:0042762","regulation of sulfur metabolic process",21,7,4.16,0.10392,0.823518]
["GO:0006641","triglyceride metabolic process",22,3,2.61,0.15293,1,null,"GO:0071370","cellular response to gibberellin stimulus",48,7,8.91,0.22499,1,null,"GO:0019740","nitrogen utilization",10,4,1.7,0.07344,0.608078,null,"GO:0045595","regulation of cell differentiation",25,8,4.95,0.10411,0.823518]
["GO:0034661","ncRNA catabolic process",24,3,2.85,0.15296,1,null,"GO:0072528","pyrimidine-containing compound biosynthetic process",38,5,7.05,0.22501,1,null,"GO:0009757","hexose mediated signaling",10,4,1.7,0.07344,0.608078,null,"GO:0006974","cellular response to DNA damage stimulus",313,55,61.99,0.10485,0.826398]
["GO:0071456","cellular response to hypoxia",201,29,23.86,0.15434,1,null,"GO:0043488","regulation of mRNA stability",59,8,10.95,0.22517,1,null,"GO:0046739","transport of virus in multicellular host",10,4,1.7,0.07344,0.608078,null,"GO:1901135","carbohydrate derivative metabolic process",711,136,140.8,0.10643,0.835856]
["GO:0010305","leaf vascular tissue pattern formation",31,6,3.68,0.15454,1,null,"GO:0090693","plant organ senescence",263,76,48.81,0.22884,1,null,"GO:0010037","response to carbon dioxide",10,4,1.7,0.07344,0.608078,null,"GO:0009753","response to jasmonic acid",394,90,78.03,0.1097,0.858471]
["GO:0042023","DNA endoreduplication",50,12,5.94,0.15631,1,null,"GO:0080090","regulation of primary metabolic process",2454,389,455.43,0.22919,1,null,"GO:0031930","mitochondria-nucleus signaling pathway",10,4,1.7,0.07344,0.608078,null,"GO:0009723","response to ethylene",188,50,37.23,0.11075,0.863614]
["GO:0009152","purine ribonucleotide biosynthetic process",97,17,11.51,0.15642,1,null,"GO:0006573","valine metabolic process",18,5,3.34,0.2309,1,null,"GO:0015740","C4-dicarboxylate transport",10,4,1.7,0.07344,0.608078,null,"GO:0009863","salicylic acid mediated signaling pathway",73,19,14.46,0.11118,0.863904]
["GO:0033044","regulation of chromosome organization",43,9,5.1,0.15675,1,null,"GO:0009808","lignin metabolic process",33,12,6.12,0.23283,1,null,"GO:0014070","response to organic cyclic compound",716,158,121.37,0.07351,0.608078,null,"GO:0009744","response to sucrose",55,15,10.89,0.11306,0.875419]
["GO:0019827","stem cell population maintenance",83,12,9.85,0.1571,1,null,"GO:0016102","diterpenoid biosynthetic process",20,6,3.71,0.23332,1,null,"GO:0072528","pyrimidine-containing compound biosynthetic process",42,6,7.12,0.07371,0.608078,null,"GO:0060560","developmental growth involved in morphogenesis",364,80,72.09,0.1143,0.881915]
["GO:0000966","RNA 5'-end processing",18,4,2.14,0.15716,1,null,"GO:0044273","sulfur compound catabolic process",15,4,2.78,0.23346,1,null,"GO:0006898","receptor-mediated endocytosis",29,10,4.92,0.07627,0.608078,null,"GO:0022412","cellular process involved in reproduction in multicellular organism",40,10,7.92,0.11736,0.88693]
["GO:0010143","cutin biosynthetic process",18,4,2.14,0.15716,1,null,"GO:0043244","regulation of protein-containing complex disassembly",15,3,2.78,0.2336,1,null,"GO:0046467","membrane lipid biosynthetic process",85,18,14.41,0.07634,0.608078,null,"GO:0046512","sphingosine biosynthetic process",10,4,1.98,0.11737,0.88693]
["GO:0048449","floral organ formation",18,4,2.14,0.15716,1,null,"GO:0033500","carbohydrate homeostasis",24,3,4.45,0.23383,1,null,"GO:0071491","cellular response to red light",13,5,2.2,0.07638,0.608078,null,"GO:1900368","regulation of post-transcriptional gene silencing by RNA",10,4,1.98,0.11737,0.88693]
["GO:0030307","positive regulation of cell growth",18,4,2.14,0.15716,1,null,"GO:0010054","trichoblast differentiation",101,16,18.74,0.234,1,null,"GO:0046488","phosphatidylinositol metabolic process",73,14,12.37,0.07644,0.608078,null,"GO:0046365","monosaccharide catabolic process",10,4,1.98,0.11737,0.88693]
["GO:0045727","positive regulation of translation",18,4,2.14,0.15716,1,null,"GO:0051241","negative regulation of multicellular organismal process",108,11,20.04,0.23487,1,null,"GO:0045862","positive regulation of proteolysis",29,6,4.92,0.07647,0.608078,null,"GO:0080112","seed growth",10,4,1.98,0.11737,0.88693]
["GO:0010411","xyloglucan metabolic process",38,7,4.51,0.15756,1,null,"GO:0009832","plant-type cell wall biogenesis",176,36,32.66,0.23498,1,null,"GO:0033875","ribonucleoside bisphosphate metabolic process",60,11,10.17,0.07648,0.608078,null,"GO:1901879","regulation of protein depolymerization",10,4,1.98,0.11737,0.88693]
["GO:0032107","regulation of response to nutrient levels",12,3,1.42,0.16279,1,null,"GO:0009617","response to bacterium",807,159,149.77,0.24089,1,null,"GO:0034032","purine nucleoside bisphosphate metabolic process",60,11,10.17,0.07648,0.608078,null,"GO:0009893","positive regulation of metabolic process",761,195,150.71,0.12097,0.901239]
["GO:0031118","rRNA pseudouridine synthesis",12,3,1.42,0.16279,1,null,"GO:0042180","cellular ketone metabolic process",152,32,28.21,0.24371,1,null,"GO:2000113","negative regulation of cellular macromolecule biosynthetic process",78,14,13.22,0.07648,0.608078,null,"GO:0048527","lateral root development",89,28,17.63,0.12107,0.901239]
["GO:0000304","response to singlet oxygen",12,3,1.42,0.16279,1,null,"GO:0015718","monocarboxylic acid transport",23,6,4.27,0.24428,1,null,"GO:0045937","positive regulation of phosphate metabolic process",16,3,2.71,0.07651,0.608078,null,"GO:0072330","monocarboxylic acid biosynthetic process",191,37,37.83,0.124,0.901239]
["GO:0006086","acetyl-CoA biosynthetic process from pyruvate",12,3,1.42,0.16279,1,null,"GO:0006631","fatty acid metabolic process",219,51,40.64,0.24441,1,null,"GO:0006664","glycolipid metabolic process",53,9,8.98,0.07652,0.608078,null,"GO:0006468","protein phosphorylation",666,152,131.89,0.1242,0.901239]
["GO:0006022","aminoglycan metabolic process",12,3,1.42,0.16279,1,null,"GO:0044272","sulfur compound biosynthetic process",172,45,31.92,0.24492,1,null,"GO:0009415","response to water",1130,443,191.55,0.07659,0.608078,null,"GO:1901700","response to oxygen-containing compound",2288,556,453.11,0.12453,0.901239]
["GO:0006401","RNA catabolic process",128,10,15.19,0.16398,1,null,"GO:0043068","positive regulation of programmed cell death",24,6,4.45,0.25318,1,null,"GO:0051170","import into nucleus",50,7,8.48,0.07659,0.608078,null,"GO:0006887","exocytosis",39,12,7.72,0.12524,0.901239]
["GO:0051321","meiotic cell cycle",292,45,34.66,0.16573,1,null,"GO:0046246","terpene biosynthetic process",14,4,2.6,0.25322,1,null,"GO:0006796","phosphate-containing compound metabolic process",1552,318,263.09,0.07768,0.614663,null,"GO:0009741","response to brassinosteroid",67,16,13.27,0.12548,0.901239]
["GO:0032259","methylation",214,35,25.4,0.16592,1,null,"GO:1900057","positive regulation of leaf senescence",14,4,2.6,0.25322,1,null,"GO:0051252","regulation of RNA metabolic process",1996,433,338.35,0.07898,0.622859,null,"GO:0090333","regulation of stomatal closure",26,8,5.15,0.12551,0.901239]
["GO:0009294","DNA-mediated transformation",25,5,2.97,0.1678,1,null,"GO:0010115","regulation of abscisic acid biosynthetic process",14,4,2.6,0.25322,1,null,"GO:0045324","late endosome to vacuole transport",44,14,7.46,0.08756,0.678118,null,"GO:0010082","regulation of root meristem growth",26,8,5.15,0.12551,0.901239]
["GO:0030150","protein import into mitochondrial matrix",25,5,2.97,0.1678,1,null,"GO:0034644","cellular response to UV",14,4,2.6,0.25322,1,null,"GO:0009628","response to abiotic stimulus",4055,1138,687.38,0.08758,0.678118,null,"GO:0010115","regulation of abscisic acid biosynthetic process",14,5,2.77,0.12556,0.901239]
["GO:0071395","cellular response to jasmonic acid stimulus",164,20,19.47,0.16817,1,null,"GO:0031408","oxylipin biosynthetic process",14,4,2.6,0.25322,1,null,"GO:0000165","MAPK cascade",19,6,3.22,0.088,0.678118,null,"GO:0071216","cellular response to biotic stimulus",14,5,2.77,0.12556,0.901239]
["GO:0048588","developmental cell growth",197,27,23.39,0.17193,1,null,"GO:0006108","malate metabolic process",14,4,2.6,0.25322,1,null,"GO:0009074","aromatic amino acid family catabolic process",19,6,3.22,0.088,0.678118,null,"GO:0006122","mitochondrial electron transport, ubiquinol to cytochrome c",14,5,2.77,0.12556,0.901239]
["GO:1901605","alpha-amino acid metabolic process",363,61,43.09,0.17506,1,null,"GO:0019646","aerobic electron transport chain",42,9,7.79,0.25326,1,null,"GO:0009833","plant-type primary cell wall biogenesis",19,6,3.22,0.088,0.678118,null,"GO:0046685","response to arsenic-containing substance",14,5,2.77,0.12556,0.901239]
["GO:0006281","DNA repair",322,51,38.22,0.17759,1,null,"GO:0009741","response to brassinosteroid",67,13,12.43,0.2534,1,null,"GO:0010506","regulation of autophagy",19,6,3.22,0.088,0.678118,null,"GO:0006002","fructose 6-phosphate metabolic process",14,5,2.77,0.12556,0.901239]
["GO:0001558","regulation of cell growth",91,15,10.8,0.18095,1,null,"GO:0048571","long-day photoperiodism",51,6,9.47,0.2543,1,null,"GO:0006012","galactose metabolic process",19,6,3.22,0.088,0.678118,null,"GO:0046164","alcohol catabolic process",14,5,2.77,0.12556,0.901239]
["GO:0009827","plant-type cell wall modification",42,9,4.99,0.18099,1,null,"GO:0071365","cellular response to auxin stimulus",90,9,16.7,0.25525,1,null,"GO:0009627","systemic acquired resistance",82,18,13.9,0.08902,0.683743,null,"GO:0071446","cellular response to salicylic acid stimulus",95,26,18.81,0.12676,0.901239]
["GO:0000160","phosphorelay signal transduction system",85,13,10.09,0.18124,1,null,"GO:0071805","potassium ion transmembrane transport",33,8,6.12,0.25935,1,null,"GO:0006511","ubiquitin-dependent protein catabolic process",401,87,67.98,0.08931,0.683743,null,"GO:0048586","regulation of long-day photoperiodism, flowering",22,7,4.36,0.12757,0.901239]
["GO:0010223","secondary shoot formation",19,4,2.26,0.18151,1,null,"GO:1903506","regulation of nucleic acid-templated transcription",1422,232,263.91,0.26474,1,null,"GO:0009687","abscisic acid metabolic process",39,16,6.61,0.09432,0.709089,null,"GO:0006536","glutamate metabolic process",18,6,3.56,0.12802,0.901239]
["GO:0007010","cytoskeleton organization",286,32,33.95,0.18236,1,null,"GO:0002221","pattern recognition receptor signaling pathway",19,5,3.53,0.26896,1,null,"GO:0016032","viral process",27,9,4.58,0.09487,0.709089,null,"GO:0009638","phototropism",18,6,3.56,0.12802,0.901239]
["GO:0033014","tetrapyrrole biosynthetic process",141,27,16.74,0.18845,1,null,"GO:0006465","signal peptide processing",19,5,3.53,0.26896,1,null,"GO:0061077","chaperone-mediated protein folding",57,13,9.66,0.095,0.709089,null,"GO:0000463","maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)",18,6,3.56,0.12802,0.901239]
["GO:0009593","detection of chemical stimulus",26,5,3.09,0.18879,1,null,"GO:0010506","regulation of autophagy",19,5,3.53,0.26896,1,null,"GO:0019762","glucosinolate catabolic process",15,5,2.54,0.0951,0.709089,null,"GO:0055046","microgametogenesis",33,8,6.54,0.12818,0.901239]
["GO:0008356","asymmetric cell division",26,5,3.09,0.18879,1,null,"GO:0008643","carbohydrate transport",35,7,6.5,0.26922,1,null,"GO:0010100","negative regulation of photomorphogenesis",15,5,2.54,0.0951,0.709089,null,"GO:0033044","regulation of chromosome organization",36,8,7.13,0.12828,0.901239]
["GO:0009845","seed germination",168,25,19.94,0.18983,1,null,"GO:0006366","transcription by RNA polymerase II",329,54,61.06,0.27126,1,null,"GO:0019853","L-ascorbic acid biosynthetic process",15,5,2.54,0.0951,0.709089,null,"GO:0009789","positive regulation of abscisic acid-activated signaling pathway",39,11,7.72,0.13327,0.933314]
["GO:0046395","carboxylic acid catabolic process",156,21,18.52,0.19379,1,null,"GO:0051239","regulation of multicellular organismal process",564,95,104.67,0.27521,1,null,"GO:0050688","regulation of defense response to virus",15,5,2.54,0.0951,0.709089,null,"GO:0006979","response to oxidative stress",475,99,94.07,0.13525,0.940664]
["GO:0090615","mitochondrial mRNA processing",13,3,1.54,0.194,1,null,"GO:0010193","response to ozone",24,6,4.45,0.27846,1,null,"GO:0006108","malate metabolic process",15,5,2.54,0.0951,0.709089,null,"GO:0006470","protein dephosphorylation",138,37,27.33,0.13612,0.940664]
["GO:1990641","response to iron ion starvation",13,3,1.54,0.194,1,null,"GO:0010197","polar nucleus fusion",24,6,4.45,0.27846,1,null,"GO:0012501","programmed cell death",155,38,26.27,0.09569,0.709089,null,"GO:0090558","plant epidermis development",324,73,64.16,0.13716,0.940664]
["GO:0007004","telomere maintenance via telomerase",13,3,1.54,0.194,1,null,"GO:0032875","regulation of DNA endoreduplication",24,6,4.45,0.27846,1,null,"GO:0009733","response to auxin",321,63,54.41,0.09652,0.709089,null,"GO:0006511","ubiquitin-dependent protein catabolic process",386,106,76.44,0.13893,0.940664]
["GO:0071577","zinc ion transmembrane transport",13,3,1.54,0.194,1,null,"GO:0000387","spliceosomal snRNP assembly",24,6,4.45,0.27846,1,null,"GO:0031348","negative regulation of defense response",73,15,12.37,0.09729,0.709089,null,"GO:0010286","heat acclimation",59,16,11.68,0.13928,0.940664]
["GO:0080163","regulation of protein serine/threonine phosphatase activity",13,3,1.54,0.194,1,null,"GO:0098657","import into cell",27,8,5.01,0.27876,1,null,"GO:0048581","negative regulation of post-embryonic development",122,26,20.68,0.0975,0.709089,null,"GO:0033036","macromolecule localization",889,208,176.06,0.14221,0.940664]
["GO:0000902","cell morphogenesis",494,71,58.64,0.19601,1,null,"GO:0042364","water-soluble vitamin biosynthetic process",49,9,9.09,0.27895,1,null,"GO:0010228","vegetative to reproductive phase transition of meristem",446,101,75.6,0.09791,0.709089,null,"GO:0033014","tetrapyrrole biosynthetic process",119,29,23.57,0.1433,0.940664]
["GO:0000959","mitochondrial RNA metabolic process",69,17,8.19,0.19659,1,null,"GO:0009768","photosynthesis, light harvesting in photosystem I",10,3,1.86,0.27913,1,null,"GO:0071369","cellular response to ethylene stimulus",73,22,12.37,0.09913,0.709089,null,"GO:0042752","regulation of circadian rhythm",55,16,10.89,0.14338,0.940664]
["GO:0048366","leaf development",523,53,62.08,0.19701,1,null,"GO:0030026","intracellular manganese ion homeostasis",10,3,1.86,0.27913,1,null,"GO:2001057","reactive nitrogen species metabolic process",20,11,3.39,0.0993,0.709089,null,"GO:0031401","positive regulation of protein modification process",30,9,5.94,0.14446,0.940664]
["GO:0042759","long-chain fatty acid biosynthetic process",33,9,3.92,0.19717,1,null,"GO:2000068","regulation of defense response to insect",10,3,1.86,0.27913,1,null,"GO:0006544","glycine metabolic process",17,8,2.88,0.09951,0.709089,null,"GO:0033692","cellular polysaccharide biosynthetic process",142,31,28.12,0.14448,0.940664]
["GO:0009066","aspartate family amino acid metabolic process",60,11,7.12,0.19735,1,null,"GO:0016575","histone deacetylation",10,3,1.86,0.27913,1,null,"GO:0090056","regulation of chlorophyll metabolic process",34,10,5.76,0.09958,0.709089,null,"GO:0032535","regulation of cellular component size",37,10,7.33,0.1445,0.940664]
["GO:0007275","multicellular organism development",4059,513,481.83,0.1974,1,null,"GO:0006814","sodium ion transport",10,3,1.86,0.27913,1,null,"GO:0042759","long-chain fatty acid biosynthetic process",33,8,5.59,0.09973,0.709089,null,"GO:0090150","establishment of protein localization to membrane",98,13,19.41,0.14556,0.940664]
["GO:0060548","negative regulation of cell death",37,5,4.39,0.19786,1,null,"GO:0010154","fruit development",1046,219,194.13,0.27938,1,null,"GO:0010337","regulation of salicylic acid metabolic process",19,5,3.22,0.09978,0.709089,null,"GO:0009788","negative regulation of abscisic acid-activated signaling pathway",44,12,8.71,0.14593,0.940664]
["GO:0009744","response to sucrose",70,11,8.31,0.20377,1,null,"GO:0044281","small molecule metabolic process",2194,448,407.18,0.28128,1,null,"GO:0006646","phosphatidylethanolamine biosynthetic process",11,4,1.86,0.10043,0.709089,null,"GO:1902600","proton transmembrane transport",27,8,5.35,0.149,0.940664]
["GO:0009624","response to nematode",70,11,8.31,0.20377,1,null,"GO:0009834","plant-type secondary cell wall biogenesis",44,10,8.17,0.28438,1,null,"GO:0009819","drought recovery",11,4,1.86,0.10043,0.709089,null,"GO:0000278","mitotic cell cycle",184,47,36.44,0.15067,0.940664]
["GO:0009657","plastid organization",293,46,34.78,0.20456,1,null,"GO:0001666","response to hypoxia",225,56,41.76,0.28699,1,null,"GO:0010072","primary shoot apical meristem specification",11,4,1.86,0.10043,0.709089,null,"GO:0006906","vesicle fusion",40,11,7.92,0.15267,0.940664]
["GO:0000373","Group II intron splicing",27,5,3.21,0.21065,1,null,"GO:0046148","pigment biosynthetic process",158,30,29.32,0.2911,1,null,"GO:0042436","indole-containing compound catabolic process",11,4,1.86,0.10043,0.709089,null,"GO:2000243","positive regulation of reproductive process",50,17,9.9,0.1527,0.940664]
["GO:0006826","iron ion transport",27,5,3.21,0.21065,1,null,"GO:0045828","positive regulation of isoprenoid metabolic process",15,4,2.78,0.29837,1,null,"GO:0030656","regulation of vitamin metabolic process",11,4,1.86,0.10043,0.709089,null,"GO:0007166","cell surface receptor signaling pathway",23,7,4.55,0.15366,0.940664]
["GO:0031328","positive regulation of cellular biosynthetic process",404,41,47.96,0.21893,1,null,"GO:0010105","negative regulation of ethylene-activated signaling pathway",15,4,2.78,0.29837,1,null,"GO:0006672","ceramide metabolic process",24,6,4.07,0.10045,0.709089,null,"GO:0010380","regulation of chlorophyll biosynthetic process",23,7,4.55,0.15366,0.940664]
["GO:0010311","lateral root formation",49,8,5.82,0.2205,1,null,"GO:0010223","secondary shoot formation",15,4,2.78,0.29837,1,null,"GO:0140694","non-membrane-bounded organelle assembly",130,13,22.04,0.1007,0.709089,null,"GO:0009294","DNA-mediated transformation",23,7,4.55,0.15366,0.940664]
["GO:0010073","meristem maintenance",203,32,24.1,0.2209,1,null,"GO:0009686","gibberellin biosynthetic process",15,4,2.78,0.29837,1,null,"GO:0045229","external encapsulating structure organization",253,42,42.89,0.10074,0.709089,null,"GO:0046395","carboxylic acid catabolic process",137,39,27.13,0.15525,0.940664]
["GO:0009260","ribonucleotide biosynthetic process",120,24,14.24,0.2224,1,null,"GO:0042775","mitochondrial ATP synthesis coupled electron transport",43,9,7.98,0.29842,1,null,"GO:0043455","regulation of secondary metabolic process",75,18,12.71,0.10409,0.730489,null,"GO:0042274","ribosomal small subunit biogenesis",80,25,15.84,0.15566,0.940664]
["GO:0090696","post-embryonic plant organ development",159,28,18.87,0.22246,1,null,"GO:0043067","regulation of programmed cell death",70,14,12.99,0.29843,1,null,"GO:0009057","macromolecule catabolic process",791,164,134.09,0.10638,0.744344,null,"GO:0071310","cellular response to organic substance",1258,328,249.13,0.15579,0.940664]
["GO:0007006","mitochondrial membrane organization",26,9,3.09,0.2228,1,null,"GO:0098661","inorganic anion transmembrane transport",26,5,4.83,0.29863,1,null,"GO:0006081","cellular aldehyde metabolic process",51,14,8.65,0.10809,0.752341,null,"GO:0048585","negative regulation of response to stimulus",198,49,39.21,0.1559,0.940664]
["GO:0071806","protein transmembrane transport",89,16,10.56,0.22285,1,null,"GO:0051651","maintenance of location in cell",38,6,7.05,0.29894,1,null,"GO:0048278","vesicle docking",31,8,5.25,0.10846,0.752341,null,"GO:0006739","NADP metabolic process",39,14,7.72,0.15609,0.940664]
["GO:1901987","regulation of cell cycle phase transition",68,12,8.07,0.223,1,null,"GO:0006399","tRNA metabolic process",158,11,29.32,0.30326,1,null,"GO:0034308","primary alcohol metabolic process",20,6,3.39,0.10848,0.752341,null,"GO:0010449","root meristem growth",37,12,7.33,0.15632,0.940664]
["GO:0007007","inner mitochondrial membrane organization",16,5,1.9,0.22309,1,null,"GO:0006826","iron ion transport",20,5,3.71,0.30823,1,null,"GO:0006352","DNA-templated transcription initiation",73,18,12.37,0.11648,0.805454,null,"GO:0009850","auxin metabolic process",44,16,8.71,0.15639,0.940664]
["GO:0019216","regulation of lipid metabolic process",79,12,9.38,0.22314,1,null,"GO:0009066","aspartate family amino acid metabolic process",55,13,10.21,0.30894,1,null,"GO:0009567","double fertilization forming a zygote and endosperm",25,7,4.24,0.11695,0.806339,null,"GO:1901264","carbohydrate derivative transport",46,12,9.11,0.15659,0.940664]
["GO:0043039","tRNA aminoacylation",49,8,5.82,0.22318,1,null,"GO:0019747","regulation of isoprenoid metabolic process",29,8,5.38,0.30897,1,null,"GO:0050896","response to stimulus",7641,1785,1295.27,0.11839,0.809223,null,"GO:0070897","transcription preinitiation complex assembly",22,7,4.36,0.15662,0.940664]
["GO:0000469","cleavage involved in rRNA processing",25,5,2.97,0.2232,1,null,"GO:0015914","phospholipid transport",18,5,3.34,0.30913,1,null,"GO:0090332","stomatal closure",53,17,8.98,0.11907,0.809223,null,"GO:0006596","polyamine biosynthetic process",11,4,2.18,0.15675,0.940664]
["GO:0031407","oxylipin metabolic process",20,4,2.37,0.22324,1,null,"GO:0046474","glycerophospholipid biosynthetic process",88,17,16.33,0.30929,1,null,"GO:0045926","negative regulation of growth",26,7,4.41,0.11981,0.809223,null,"GO:0006346","DNA methylation-dependent heterochromatin formation",11,4,2.18,0.15675,0.940664]
["GO:0071265","L-methionine biosynthetic process",12,3,1.42,0.22325,1,null,"GO:1900140","regulation of seedling development",87,16,16.15,0.30943,1,null,"GO:0006541","glutamine metabolic process",16,5,2.71,0.11985,0.809223,null,"GO:0019288","isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway",11,4,2.18,0.15675,0.940664]
["GO:0051304","chromosome separation",17,3,2.02,0.22331,1,null,"GO:0046470","phosphatidylcholine metabolic process",18,3,3.34,0.30946,1,null,"GO:0071712","ER-associated misfolded protein catabolic process",16,5,2.71,0.11985,0.809223,null,"GO:0005992","trehalose biosynthetic process",11,4,2.18,0.15675,0.940664]
["GO:0120254","olefinic compound metabolic process",70,9,8.31,0.22334,1,null,"GO:0032102","negative regulation of response to external stimulus",38,6,7.05,0.30958,1,null,"GO:0055075","potassium ion homeostasis",16,5,2.71,0.11985,0.809223,null,"GO:0007584","response to nutrient",11,4,2.18,0.15675,0.940664]
["GO:0016577","histone demethylation",14,2,1.66,0.22337,1,null,"GO:0002832","negative regulation of response to biotic stimulus",38,6,7.05,0.30958,1,null,"GO:0010959","regulation of metal ion transport",16,5,2.71,0.11985,0.809223,null,"GO:0000578","embryonic axis specification",11,4,2.18,0.15675,0.940664]
["GO:0034219","carbohydrate transmembrane transport",21,2,2.49,0.22346,1,null,"GO:0046394","carboxylic acid biosynthetic process",457,100,84.81,0.30999,1,null,"GO:0010053","root epidermal cell differentiation",147,24,24.92,0.12029,0.809223,null,"GO:1902369","negative regulation of RNA catabolic process",11,4,2.18,0.15675,0.940664]
["GO:0043467","regulation of generation of precursor metabolites and energy",31,3,3.68,0.22348,1,null,"GO:0006354","DNA-templated transcription elongation",49,5,9.09,0.31008,1,null,"GO:1901698","response to nitrogen compound",215,49,36.45,0.12053,0.809223,null,"GO:0046352","disaccharide catabolic process",11,4,2.18,0.15675,0.940664]
["GO:0140962","multicellular organismal-level chemical homeostasis",26,2,3.09,0.22352,1,null,"GO:0006109","regulation of carbohydrate metabolic process",68,8,12.62,0.31017,1,null,"GO:0032259","methylation",214,16,36.28,0.1208,0.809223,null,"GO:1901001","negative regulation of response to salt stress",11,4,2.18,0.15675,0.940664]
["GO:0031323","regulation of cellular metabolic process",2920,333,346.62,0.2251,1,null,"GO:0050821","protein stabilization",25,6,4.64,0.31362,1,null,"GO:0009084","glutamine family amino acid biosynthetic process",30,8,5.09,0.12232,0.814776,null,"GO:0010315","auxin export across the plasma membrane",11,4,2.18,0.15675,0.940664]
["GO:0007267","cell-cell signaling",30,7,3.56,0.22603,1,null,"GO:0010207","photosystem II assembly",25,6,4.64,0.31362,1,null,"GO:0009407","toxin catabolic process",30,8,5.09,0.12232,0.814776,null,"GO:0010332","response to gamma radiation",11,4,2.18,0.15675,0.940664]
["GO:0009089","lysine biosynthetic process via diaminopimelate",14,3,1.66,0.2265,1,null,"GO:0048024","regulation of mRNA splicing, via spliceosome",25,6,4.64,0.31362,1,null,"GO:0006721","terpenoid metabolic process",203,47,34.41,0.1237,0.821647,null,"GO:0043455","regulation of secondary metabolic process",51,14,10.1,0.15704,0.940664]
["GO:0006570","tyrosine metabolic process",14,3,1.66,0.2265,1,null,"GO:0062012","regulation of small molecule metabolic process",133,24,24.68,0.31428,1,null,"GO:0009624","response to nematode",70,16,11.87,0.12479,0.826558,null,"GO:0010564","regulation of cell cycle process",104,23,20.6,0.15732,0.940664]
["GO:0006301","postreplication repair",14,3,1.66,0.2265,1,null,"GO:0008219","cell death",180,37,33.41,0.31577,1,null,"GO:0042026","protein refolding",35,9,5.93,0.12562,0.829725,null,"GO:0072329","monocarboxylic acid catabolic process",59,24,11.68,0.15733,0.940664]
["GO:0098656","monoatomic anion transmembrane transport",14,3,1.66,0.2265,1,null,"GO:0016226","iron-sulfur cluster assembly",30,7,5.57,0.31653,1,null,"GO:0009853","photorespiration",45,11,7.63,0.12838,0.835215,null,"GO:0002221","pattern recognition receptor signaling pathway",19,6,3.76,0.15735,0.940664]
["GO:0070475","rRNA base methylation",14,3,1.66,0.2265,1,null,"GO:0045454","cell redox homeostasis",35,8,6.5,0.31795,1,null,"GO:0006644","phospholipid metabolic process",192,42,32.55,0.13029,0.835215,null,"GO:0048768","root hair cell tip growth",19,6,3.76,0.15735,0.940664]
["GO:0090068","positive regulation of cell cycle process",24,4,2.85,0.22654,1,null,"GO:0006635","fatty acid beta-oxidation",40,9,7.42,0.31839,1,null,"GO:0044275","cellular carbohydrate catabolic process",41,16,6.95,0.13035,0.835215,null,"GO:0030490","maturation of SSU-rRNA",51,20,10.1,0.15775,0.940664]
["GO:0045010","actin nucleation",27,4,3.21,0.22662,1,null,"GO:0010162","seed dormancy process",52,11,9.65,0.31848,1,null,"GO:0010941","regulation of cell death",100,22,16.95,0.13086,0.835215,null,"GO:0010015","root morphogenesis",370,91,73.27,0.15807,0.940664]
["GO:0048507","meristem development",504,75,59.83,0.22708,1,null,"GO:0051234","establishment of localization",1784,281,331.09,0.31887,1,null,"GO:0048638","regulation of developmental growth",216,40,36.62,0.13089,0.835215,null,"GO:0009617","response to bacterium",807,191,159.82,0.15854,0.940664]
["GO:0006568","tryptophan metabolic process",48,11,5.7,0.23215,1,null,"GO:0040034","regulation of development, heterochronic",38,11,7.05,0.33415,1,null,"GO:0009556","microsporogenesis",21,6,3.56,0.13115,0.835215,null,"GO:0048574","long-day photoperiodism, flowering",37,12,7.33,0.15865,0.940664]
["GO:0006636","unsaturated fatty acid biosynthetic process",21,4,2.49,0.23341,1,null,"GO:0043547","positive regulation of GTPase activity",31,7,5.75,0.33475,1,null,"GO:0002221","pattern recognition receptor signaling pathway",21,6,3.56,0.13115,0.835215,null,"GO:0031425","chloroplast RNA processing",25,7,4.95,0.1591,0.940664]
["GO:0061640","cytoskeleton-dependent cytokinesis",60,7,7.12,0.23384,1,null,"GO:0009694","jasmonic acid metabolic process",31,7,5.75,0.33475,1,null,"GO:0080183","response to photooxidative stress",12,4,2.03,0.13125,0.835215,null,"GO:0000054","ribosomal subunit export from nucleus",15,5,2.97,0.1591,0.940664]
["GO:0048869","cellular developmental process",1116,172,132.48,0.23435,1,null,"GO:0000289","nuclear-transcribed mRNA poly(A) tail shortening",11,3,2.04,0.33482,1,null,"GO:0080113","regulation of seed growth",12,4,2.03,0.13125,0.835215,null,"GO:0019253","reductive pentose-phosphate cycle",15,5,2.97,0.1591,0.940664]
["GO:0010087","phloem or xylem histogenesis",119,21,14.13,0.23624,1,null,"GO:0006560","proline metabolic process",11,3,2.04,0.33482,1,null,"GO:0110156","methylguanosine-cap decapping",12,4,2.03,0.13125,0.835215,null,"GO:0019217","regulation of fatty acid metabolic process",15,5,2.97,0.1591,0.940664]
["GO:0009723","response to ethylene",215,30,25.52,0.23918,1,null,"GO:0032922","circadian regulation of gene expression",11,3,2.04,0.33482,1,null,"GO:0060321","acceptance of pollen",12,4,2.03,0.13125,0.835215,null,"GO:0010223","secondary shoot formation",15,5,2.97,0.1591,0.940664]
["GO:0009168","purine ribonucleoside monophosphate biosynthetic process",22,7,2.61,0.24339,1,null,"GO:0070370","cellular heat acclimation",11,3,2.04,0.33482,1,null,"GO:0034765","regulation of monoatomic ion transmembrane transport",12,4,2.03,0.13125,0.835215,null,"GO:0046854","phosphatidylinositol phosphate biosynthetic process",15,5,2.97,0.1591,0.940664]
["GO:0065004","protein-DNA complex assembly",64,10,7.6,0.24375,1,null,"GO:0042128","nitrate assimilation",11,3,2.04,0.33482,1,null,"GO:0009698","phenylpropanoid metabolic process",93,17,15.76,0.13134,0.835215,null,"GO:0010389","regulation of G2/M transition of mitotic cell cycle",15,5,2.97,0.1591,0.940664]
["GO:1901401","regulation of tetrapyrrole metabolic process",49,8,5.82,0.24379,1,null,"GO:1902369","negative regulation of RNA catabolic process",11,3,2.04,0.33482,1,null,"GO:0006084","acetyl-CoA metabolic process",31,6,5.25,0.13141,0.835215,null,"GO:0045927","positive regulation of growth",31,8,6.14,0.15913,0.940664]
["GO:0019747","regulation of isoprenoid metabolic process",34,6,4.04,0.24383,1,null,"GO:0031118","rRNA pseudouridine synthesis",11,3,2.04,0.33482,1,null,"GO:0006468","protein phosphorylation",829,151,140.53,0.13308,0.841948,null,"GO:0098661","inorganic anion transmembrane transport",26,7,5.15,0.15913,0.940664]
["GO:0098781","ncRNA transcription",18,4,2.14,0.24384,1,null,"GO:0031145","anaphase-promoting complex-dependent catabolic process",11,3,2.04,0.33482,1,null,"GO:0080134","regulation of response to stress",797,193,135.1,0.13372,0.841948,null,"GO:0015996","chlorophyll catabolic process",36,10,7.13,0.15969,0.941443]
["GO:0009206","purine ribonucleoside triphosphate biosynthetic process",37,6,4.39,0.24389,1,null,"GO:1902456","regulation of stomatal opening",11,3,2.04,0.33482,1,null,"GO:0006873","intracellular monoatomic ion homeostasis",146,44,24.75,0.13443,0.841948,null,"GO:0009409","response to cold",447,102,88.52,0.16101,0.946687]
["GO:0045047","protein targeting to ER",37,6,4.39,0.24389,1,null,"GO:0006020","inositol metabolic process",11,3,2.04,0.33482,1,null,"GO:0055080","monoatomic cation homeostasis",183,47,31.02,0.13469,0.841948,null,"GO:0009790","embryo development",631,134,124.96,0.16528,0.969202]
["GO:0032880","regulation of protein localization",23,4,2.73,0.24395,1,null,"GO:0000105","histidine biosynthetic process",11,3,2.04,0.33482,1,null,"GO:0044255","cellular lipid metabolic process",959,201,162.57,0.13494,0.841948,null,"GO:0000910","cytokinesis",132,32,26.14,0.16669,0.974871]
["GO:0010962","regulation of glucan biosynthetic process",27,4,3.21,0.24404,1,null,"GO:0006972","hyperosmotic response",57,11,10.58,0.33494,1,null,"GO:0021700","developmental maturation",330,66,55.94,0.13517,0.841948,null,"GO:0003333","amino acid transmembrane transport",28,8,5.55,0.17444,0.979044]
["GO:0003333","amino acid transmembrane transport",43,7,5.1,0.24412,1,null,"GO:1901000","regulation of response to salt stress",32,6,5.94,0.33502,1,null,"GO:0051345","positive regulation of hydrolase activity",38,11,6.44,0.13564,0.841948,null,"GO:0006414","translational elongation",44,9,8.71,0.17497,0.979044]
["GO:0009630","gravitropism",86,14,10.21,0.24995,1,null,"GO:0046283","anthocyanin-containing compound metabolic process",43,8,7.98,0.33503,1,null,"GO:0006730","one-carbon metabolic process",18,6,3.05,0.13577,0.841948,null,"GO:0009058","biosynthetic process",4837,1059,957.91,0.17573,0.979044]
["GO:0009967","positive regulation of signal transduction",82,12,9.73,0.2505,1,null,"GO:0070897","transcription preinitiation complex assembly",22,4,4.08,0.33505,1,null,"GO:1990069","stomatal opening",19,6,3.22,0.13578,0.841948,null,"GO:0009416","response to light stimulus",1626,395,322.01,0.17678,0.979044]
["GO:0000911","cytokinesis by cell plate formation",66,10,7.83,0.25341,1,null,"GO:0010876","lipid localization",89,29,16.52,0.33543,1,null,"GO:0010496","intercellular transport",20,3,3.39,0.13604,0.841948,null,"GO:0050896","response to stimulus",6287,1425,1245.06,0.17695,0.979044]
["GO:0043170","macromolecule metabolic process",8651,1126,1026.94,0.25477,1,null,"GO:0071824","protein-DNA complex subunit organization",65,17,12.06,0.33627,1,null,"GO:1901615","organic hydroxy compound metabolic process",333,88,56.45,0.13725,0.847213,null,"GO:0071369","cellular response to ethylene stimulus",66,20,13.07,0.17718,0.979044]
["GO:0010091","trichome branching",29,5,3.44,0.25655,1,null,"GO:0010769","regulation of cell morphogenesis involved in differentiation",24,9,4.45,0.33631,1,null,"GO:0016310","phosphorylation",912,173,154.6,0.13829,0.851275,null,"GO:0051156","glucose 6-phosphate metabolic process",32,12,6.34,0.17731,0.979044]
["GO:0070417","cellular response to cold",29,5,3.44,0.25655,1,null,"GO:0120254","olefinic compound metabolic process",59,15,10.95,0.33637,1,null,"GO:0006950","response to stress",4574,1190,775.36,0.13863,0.851275,null,"GO:0006412","translation",562,132,111.3,0.17755,0.979044]
["GO:0090698","post-embryonic plant morphogenesis",171,27,20.3,0.25902,1,null,"GO:0051253","negative regulation of RNA metabolic process",158,32,29.32,0.33652,1,null,"GO:0006090","pyruvate metabolic process",78,19,13.22,0.13973,0.852769,null,"GO:0048284","organelle fusion",70,17,13.86,0.17757,0.979044]
["GO:1901136","carbohydrate derivative catabolic process",47,10,5.58,0.2597,1,null,"GO:0009895","negative regulation of catabolic process",21,6,3.9,0.33658,1,null,"GO:0006575","cellular modified amino acid metabolic process",51,14,8.65,0.13978,0.852769,null,"GO:0006873","intracellular monoatomic ion homeostasis",125,27,24.75,0.17766,0.979044]
["GO:0009750","response to fructose",15,3,1.78,0.25992,1,null,"GO:0031407","oxylipin metabolic process",16,5,2.97,0.33659,1,null,"GO:0010962","regulation of glucan biosynthetic process",27,7,4.58,0.1401,0.852769,null,"GO:0031099","regeneration",14,5,2.77,0.17767,0.979044]
["GO:0006521","regulation of cellular amino acid metabolic process",15,3,1.78,0.25992,1,null,"GO:0001763","morphogenesis of a branching structure",17,5,3.16,0.33661,1,null,"GO:0006790","sulfur compound metabolic process",515,104,87.3,0.14032,0.852769,null,"GO:0120255","olefinic compound biosynthetic process",47,11,9.31,0.17772,0.979044]
["GO:0030026","intracellular manganese ion homeostasis",15,3,1.78,0.25992,1,null,"GO:1903507","negative regulation of nucleic acid-templated transcription",145,28,26.91,0.33669,1,null,"GO:0006497","protein lipidation",101,14,17.12,0.14072,0.853002,null,"GO:0034728","nucleosome organization",28,5,5.55,0.17795,0.979044]
["GO:0009862","systemic acquired resistance, salicylic acid mediated signaling pathway",15,3,1.78,0.25992,1,null,"GO:0032272","negative regulation of protein polymerization",12,3,2.23,0.33673,1,null,"GO:0009892","negative regulation of metabolic process",948,192,160.7,0.14204,0.858796,null,"GO:1900864","mitochondrial RNA modification",35,5,6.93,0.1781,0.979044]
["GO:0010262","somatic embryogenesis",15,3,1.78,0.25992,1,null,"GO:0005991","trehalose metabolic process",13,3,2.41,0.33675,1,null,"GO:1901605","alpha-amino acid metabolic process",363,79,61.53,0.14244,0.859012,null,"GO:0097435","supramolecular fiber organization",133,23,26.34,0.17825,0.979044]
["GO:0019762","glucosinolate catabolic process",15,3,1.78,0.25992,1,null,"GO:0048017","inositol lipid-mediated signaling",14,3,2.6,0.33677,1,null,"GO:0009636","response to toxic substance",133,34,22.55,0.14577,0.87323,null,"GO:0044238","primary metabolic process",8489,1798,1681.14,0.17959,0.979044]
["GO:0032544","plastid translation",22,4,2.61,0.26058,1,null,"GO:0009085","lysine biosynthetic process",15,3,2.78,0.33679,1,null,"GO:0043603","amide metabolic process",733,71,124.25,0.1466,0.87323,null,"GO:0006413","translational initiation",54,18,10.69,0.18093,0.979044]
["GO:0009686","gibberellin biosynthetic process",22,4,2.61,0.26058,1,null,"GO:0043631","RNA polyadenylation",26,5,4.83,0.33679,1,null,"GO:0045333","cellular respiration",127,26,21.53,0.14689,0.87323,null,"GO:0098662","inorganic cation transmembrane transport",124,31,24.56,0.18099,0.979044]
["GO:0009612","response to mechanical stimulus",22,4,2.61,0.26058,1,null,"GO:1901336","lactone biosynthetic process",16,3,2.97,0.33681,1,null,"GO:0072329","monocarboxylic acid catabolic process",63,15,10.68,0.14692,0.87323,null,"GO:0010119","regulation of stomatal movement",73,19,14.46,0.18172,0.979044]
["GO:0006099","tricarboxylic acid cycle",44,7,5.22,0.26301,1,null,"GO:0042559","pteridine-containing compound biosynthetic process",15,2,2.78,0.3369,1,null,"GO:0006879","intracellular iron ion homeostasis",27,7,4.58,0.14722,0.87323,null,"GO:0006378","mRNA polyadenylation",24,7,4.75,0.18197,0.979044]
["GO:0071472","cellular response to salt stress",37,6,4.39,0.2717,1,null,"GO:0046189","phenol-containing compound biosynthetic process",17,2,3.16,0.33694,1,null,"GO:0032968","positive regulation of transcription elongation by RNA polymerase II",17,5,2.88,0.14727,0.87323,null,"GO:0032875","regulation of DNA endoreduplication",24,7,4.75,0.18197,0.979044]
["GO:0051510","regulation of unidimensional cell growth",55,8,6.53,0.27175,1,null,"GO:0055074","calcium ion homeostasis",39,6,7.24,0.33695,1,null,"GO:0044272","sulfur compound biosynthetic process",238,44,40.34,0.14739,0.87323,null,"GO:0046686","response to cadmium ion",55,14,10.89,0.18612,0.979044]
["GO:0008610","lipid biosynthetic process",722,89,85.71,0.2753,1,null,"GO:0090696","post-embryonic plant organ development",131,23,24.31,0.33696,1,null,"GO:0031327","negative regulation of cellular biosynthetic process",309,78,52.38,0.15078,0.891076,null,"GO:0005985","sucrose metabolic process",32,9,6.34,0.18915,0.979044]
["GO:0009741","response to brassinosteroid",97,23,11.51,0.27681,1,null,"GO:0051702","biological process involved in interaction with symbiont",61,8,11.32,0.33718,1,null,"GO:0001101","response to acid chemical",1150,450,194.94,0.15368,0.905944,null,"GO:0006879","intracellular iron ion homeostasis",20,6,3.96,0.18928,0.979044]
["GO:0009926","auxin polar transport",88,12,10.45,0.28233,1,null,"GO:0015931","nucleobase-containing compound transport",93,12,17.26,0.3374,1,null,"GO:0006006","glucose metabolic process",45,12,7.63,0.15548,0.914269,null,"GO:0006826","iron ion transport",20,6,3.96,0.18928,0.979044]
["GO:0006996","organelle organization",1416,204,168.09,0.28549,1,null,"GO:0044770","cell cycle phase transition",64,6,11.88,0.33746,1,null,"GO:0051093","negative regulation of developmental process",165,38,27.97,0.15879,0.920813,null,"GO:0031328","positive regulation of cellular biosynthetic process",335,84,66.34,0.19063,0.979044]
["GO:0045814","negative regulation of gene expression, epigenetic",60,10,7.12,0.28781,1,null,"GO:0048438","floral whorl development",129,17,23.94,0.33759,1,null,"GO:0071805","potassium ion transmembrane transport",37,10,6.27,0.16011,0.920813,null,"GO:0030433","ubiquitin-dependent ERAD pathway",42,11,8.32,0.19544,0.979044]
["GO:0048528","post-embryonic root development",124,21,14.72,0.28944,1,null,"GO:0051668","localization within membrane",122,13,22.64,0.33789,1,null,"GO:0010207","photosystem II assembly",27,7,4.58,0.16039,0.920813,null,"GO:0044030","regulation of DNA methylation",16,5,3.17,0.1958,0.979044]
["GO:0035266","meristem growth",81,15,9.62,0.28963,1,null,"GO:0006633","fatty acid biosynthetic process",106,24,19.67,0.33902,1,null,"GO:0010380","regulation of chlorophyll biosynthetic process",27,7,4.58,0.16039,0.920813,null,"GO:0048449","floral organ formation",16,5,3.17,0.1958,0.979044]
["GO:0009808","lignin metabolic process",45,7,5.34,0.2904,1,null,"GO:0051171","regulation of nitrogen compound metabolic process",2391,378,443.74,0.33927,1,null,"GO:0009749","response to glucose",65,16,11.02,0.16064,0.920813,null,"GO:0080134","regulation of response to stress",661,150,130.9,0.196,0.979044]
["GO:0000018","regulation of DNA recombination",26,4,3.09,0.29055,1,null,"GO:0009860","pollen tube growth",114,27,21.16,0.33954,1,null,"GO:0080090","regulation of primary metabolic process",2925,573,495.83,0.16257,0.920813,null,"GO:0048509","regulation of meristem development",43,9,8.52,0.19607,0.979044]
["GO:0031348","negative regulation of defense response",73,12,8.67,0.29236,1,null,"GO:0015698","inorganic anion transport",48,10,8.91,0.34433,1,null,"GO:0010033","response to organic substance",3639,974,616.87,0.16264,0.920813,null,"GO:0009117","nucleotide metabolic process",259,70,51.29,0.19614,0.979044]
["GO:0046483","heterocycle metabolic process",5728,792,679.95,0.29268,1,null,"GO:0098659","inorganic cation import across plasma membrane",16,4,2.97,0.34435,1,null,"GO:0006955","immune response",245,47,41.53,0.16482,0.920813,null,"GO:0070482","response to oxygen levels",231,73,45.75,0.19622,0.979044]
["GO:0033013","tetrapyrrole metabolic process",302,37,35.85,0.2939,1,null,"GO:0045892","negative regulation of DNA-templated transcription",143,27,26.54,0.34528,1,null,"GO:0005975","carbohydrate metabolic process",775,149,131.37,0.16494,0.920813,null,"GO:0009259","ribonucleotide metabolic process",183,48,36.24,0.19729,0.979044]
["GO:0090481","pyrimidine nucleotide-sugar transmembrane transport",16,3,1.9,0.29391,1,null,"GO:0046890","regulation of lipid biosynthetic process",50,11,9.28,0.34801,1,null,"GO:0009694","jasmonic acid metabolic process",39,9,6.61,0.1653,0.920813,null,"GO:0090697","post-embryonic plant organ morphogenesis",82,25,16.24,0.1975,0.979044]
["GO:0006360","transcription by RNA polymerase I",16,3,1.9,0.29391,1,null,"GO:0010089","xylem development",21,5,3.9,0.3482,1,null,"GO:0006596","polyamine biosynthetic process",13,4,2.2,0.16539,0.920813,null,"GO:0000377","RNA splicing, via transesterification reactions with bulged adenosine as nucleophile",241,56,47.73,0.19752,0.979044]
["GO:2000038","regulation of stomatal complex development",16,3,1.9,0.29391,1,null,"GO:0042762","regulation of sulfur metabolic process",21,5,3.9,0.3482,1,null,"GO:0010206","photosystem II repair",13,4,2.2,0.16539,0.920813,null,"GO:0035459","vesicle cargo loading",12,7,2.38,0.19778,0.979044]
["GO:0048354","mucilage biosynthetic process involved in seed coat development",16,3,1.9,0.29391,1,null,"GO:0080156","mitochondrial mRNA modification",31,7,5.75,0.3492,1,null,"GO:0009065","glutamine family amino acid catabolic process",13,4,2.2,0.16539,0.920813,null,"GO:0042593","glucose homeostasis",19,8,3.76,0.19781,0.979044]
["GO:0010959","regulation of metal ion transport",16,3,1.9,0.29391,1,null,"GO:0012501","programmed cell death",135,25,25.05,0.34968,1,null,"GO:0006379","mRNA cleavage",13,4,2.2,0.16539,0.920813,null,"GO:0042743","hydrogen peroxide metabolic process",41,12,8.12,0.19783,0.979044]
["GO:0010227","floral organ abscission",16,3,1.9,0.29391,1,null,"GO:0048437","floral organ development",165,25,30.62,0.35028,1,null,"GO:0010044","response to aluminum ion",13,4,2.2,0.16539,0.920813,null,"GO:0043628","regulatory ncRNA 3'-end processing",21,8,4.16,0.19783,0.979044]
["GO:0052325","cell wall pectin biosynthetic process",16,3,1.9,0.29391,1,null,"GO:0009416","response to light stimulus",1626,322,301.77,0.35085,1,null,"GO:1901403","positive regulation of tetrapyrrole metabolic process",13,4,2.2,0.16539,0.920813,null,"GO:0062197","cellular response to chemical stress",102,24,20.2,0.19783,0.979044]
["GO:0006355","regulation of DNA-templated transcription",1705,185,202.4,0.29548,1,null,"GO:0009658","chloroplast organization",205,45,38.05,0.35619,1,null,"GO:0040020","regulation of meiotic nuclear division",13,4,2.2,0.16539,0.920813,null,"GO:0051174","regulation of phosphorus metabolic process",83,20,16.44,0.19785,0.979044]
["GO:0006629","lipid metabolic process",1253,152,148.74,0.29757,1,null,"GO:0016310","phosphorylation",736,93,136.59,0.36542,1,null,"GO:0032879","regulation of localization",121,22,20.51,0.16543,0.920813,null,"GO:2000112","regulation of cellular macromolecule biosynthetic process",141,31,27.92,0.19788,0.979044]
["GO:0010218","response to far red light",46,7,5.46,0.30189,1,null,"GO:0006725","cellular aromatic compound metabolic process",5162,781,958.01,0.36649,1,null,"GO:0005984","disaccharide metabolic process",57,26,9.66,0.16861,0.920813,null,"GO:0060341","regulation of cellular localization",30,9,5.94,0.19788,0.979044]
["GO:0034614","cellular response to reactive oxygen species",31,5,3.68,0.30452,1,null,"GO:0098542","defense response to other organism",1363,265,252.96,0.36917,1,null,"GO:0062197","cellular response to chemical stress",115,33,19.49,0.16877,0.920813,null,"GO:0032885","regulation of polysaccharide biosynthetic process",27,8,5.35,0.19791,0.979044]
["GO:0010629","negative regulation of gene expression",299,27,35.49,0.30819,1,null,"GO:0072330","monocarboxylic acid biosynthetic process",191,41,35.45,0.3696,1,null,"GO:2000028","regulation of photoperiodism, flowering",89,22,15.09,0.16887,0.920813,null,"GO:0042327","positive regulation of phosphorylation",11,4,2.18,0.19797,0.979044]
["GO:0040007","growth",1360,191,161.44,0.31042,1,null,"GO:0071396","cellular response to lipid",697,142,129.36,0.37335,1,null,"GO:0034285","response to disaccharide",72,21,12.21,0.16905,0.920813,null,"GO:0034250","positive regulation of amide metabolic process",17,5,3.37,0.19798,0.979044]
["GO:0009561","megagametogenesis",66,17,7.83,0.31158,1,null,"GO:0010628","positive regulation of gene expression",58,11,10.76,0.37557,1,null,"GO:0046351","disaccharide biosynthetic process",28,13,4.75,0.16908,0.920813,null,"GO:0042727","flavin-containing compound biosynthetic process",12,4,2.38,0.19798,0.979044]
["GO:0033037","polysaccharide localization",42,11,4.99,0.31481,1,null,"GO:0033036","macromolecule localization",889,138,164.99,0.377,1,null,"GO:0009259","ribonucleotide metabolic process",203,40,34.41,0.16924,0.920813,null,"GO:0051306","mitotic sister chromatid separation",11,2,2.18,0.1981,0.979044]
["GO:1900864","mitochondrial RNA modification",33,9,3.92,0.31493,1,null,"GO:0070887","cellular response to chemical stimulus",1581,311,293.42,0.37974,1,null,"GO:0019685","photosynthesis, dark reaction",17,8,2.88,0.16927,0.920813,null,"GO:0032200","telomere organization",25,4,4.95,0.19816,0.979044]
["GO:0009220","pyrimidine ribonucleotide biosynthetic process",27,8,3.21,0.31497,1,null,"GO:0019941","modification-dependent protein catabolic process",393,78,72.94,0.38247,1,null,"GO:0140056","organelle localization by membrane tethering",42,12,7.12,0.16928,0.920813,null,"GO:0009559","embryo sac central cell differentiation",25,4,4.95,0.19816,0.979044]
["GO:0090151","establishment of protein localization to mitochondrial membrane",22,7,2.61,0.31503,1,null,"GO:0006767","water-soluble vitamin metabolic process",61,14,11.32,0.38294,1,null,"GO:0042593","glucose homeostasis",23,7,3.9,0.16938,0.920813,null,"GO:0043549","regulation of kinase activity",28,3,5.55,0.19826,0.979044]
["GO:0042401","biogenic amine biosynthetic process",36,8,4.27,0.31512,1,null,"GO:0009070","serine family amino acid biosynthetic process",32,7,5.94,0.38325,1,null,"GO:0042181","ketone biosynthetic process",35,9,5.93,0.16938,0.920813,null,"GO:0006505","GPI anchor metabolic process",29,2,5.74,0.19835,0.979044]
["GO:0034620","cellular response to unfolded protein",32,7,3.8,0.31519,1,null,"GO:0006534","cysteine metabolic process",22,5,4.08,0.38327,1,null,"GO:0034250","positive regulation of amide metabolic process",19,6,3.22,0.1694,0.920813,null,"GO:0051274","beta-glucan biosynthetic process",61,16,12.08,0.19836,0.979044]
["GO:0032881","regulation of polysaccharide metabolic process",41,8,4.87,0.3152,1,null,"GO:0090056","regulation of chlorophyll metabolic process",30,6,5.57,0.38336,1,null,"GO:0042060","wound healing",23,6,3.9,0.16944,0.920813,null,"GO:0010393","galacturonan metabolic process",93,14,18.42,0.19839,0.979044]
["GO:0009142","nucleoside triphosphate biosynthetic process",53,9,6.29,0.31526,1,null,"GO:0006865","amino acid transport",35,6,6.5,0.38354,1,null,"GO:0009700","indole phytoalexin biosynthetic process",17,4,2.88,0.1695,0.920813,null,"GO:0009240","isopentenyl diphosphate biosynthetic process",19,7,3.76,0.19846,0.979044]
["GO:1901991","negative regulation of mitotic cell cycle phase transition",25,4,2.97,0.31548,1,null,"GO:0071322","cellular response to carbohydrate stimulus",50,8,9.28,0.38369,1,null,"GO:0046471","phosphatidylglycerol metabolic process",12,3,2.03,0.16951,0.920813,null,"GO:0031647","regulation of protein stability",33,9,6.54,0.19858,0.979044]
["GO:0045862","positive regulation of proteolysis",29,4,3.44,0.31555,1,null,"GO:0031401","positive regulation of protein modification process",30,4,5.57,0.38374,1,null,"GO:0071025","RNA surveillance",16,2,2.71,0.1696,0.920813,null,"GO:0035265","organ growth",19,6,3.76,0.19861,0.979044]
["GO:0031125","rRNA 3'-end processing",14,2,1.66,0.31558,1,null,"GO:0010557","positive regulation of macromolecule biosynthetic process",300,53,55.68,0.38397,1,null,"GO:0009860","pollen tube growth",102,21,17.29,0.16987,0.920813,null,"GO:0005982","starch metabolic process",63,14,12.48,0.19872,0.979044]
["GO:0010927","cellular component assembly involved in morphogenesis",28,3,3.32,0.31567,1,null,"GO:0010017","red or far-red light signaling pathway",45,10,8.35,0.38528,1,null,"GO:0009620","response to fungus",843,220,142.9,0.17343,0.937954,null,"GO:0016236","macroautophagy",39,8,7.72,0.1989,0.979044]
["GO:0055074","calcium ion homeostasis",49,4,5.82,0.31587,1,null,"GO:0044242","cellular lipid catabolic process",93,29,17.26,0.38758,1,null,"GO:0048574","long-day photoperiodism, flowering",44,13,7.46,0.17639,0.948827,null,"GO:0071241","cellular response to inorganic substance",24,4,4.75,0.19905,0.979044]
["GO:0010476","gibberellin mediated signaling pathway",51,4,6.05,0.3159,1,null,"GO:0051260","protein homooligomerization",22,5,4.08,0.38843,1,null,"GO:0071333","cellular response to glucose stimulus",18,5,3.05,0.17705,0.948827,null,"GO:0010074","maintenance of meristem identity",45,14,8.91,0.19955,0.979044]
["GO:0045492","xylan biosynthetic process",24,4,2.85,0.31642,1,null,"GO:1990748","cellular detoxification",33,13,6.12,0.38877,1,null,"GO:0045727","positive regulation of translation",18,5,3.05,0.17705,0.948827,null,"GO:0002238","response to molecule of fungal origin",12,4,2.38,0.20017,0.979044]
["GO:0016310","phosphorylation",912,78,108.26,0.31679,1,null,"GO:0042886","amide transport",25,10,4.64,0.38914,1,null,"GO:0000422","autophagy of mitochondrion",18,5,3.05,0.17705,0.948827,null,"GO:2000023","regulation of lateral root development",12,4,2.38,0.20017,0.979044]
["GO:0009627","systemic acquired resistance",82,12,9.73,0.32138,1,null,"GO:2001141","regulation of RNA biosynthetic process",1429,234,265.21,0.38998,1,null,"GO:0009739","response to gibberellin",108,17,18.31,0.18021,0.961765,null,"GO:0048658","anther wall tapetum development",12,4,2.38,0.20017,0.979044]
["GO:0006418","tRNA aminoacylation for protein translation",47,7,5.58,0.32177,1,null,"GO:0009875","pollen-pistil interaction",24,6,4.45,0.39006,1,null,"GO:0046700","heterocycle catabolic process",252,55,42.72,0.18028,0.961765,null,"GO:0006189","de novo' IMP biosynthetic process",12,4,2.38,0.20017,0.979044]
["GO:0006417","regulation of translation",118,15,14.01,0.32815,1,null,"GO:0006563","L-serine metabolic process",25,6,4.64,0.39011,1,null,"GO:0009828","plant-type cell wall loosening",23,6,3.9,0.18244,0.966727,null,"GO:0050665","hydrogen peroxide biosynthetic process",12,4,2.38,0.20017,0.979044]
["GO:0051555","flavonol biosynthetic process",17,3,2.02,0.32815,1,null,"GO:0048575","short-day photoperiodism, flowering",12,3,2.23,0.39025,1,null,"GO:0090630","activation of GTPase activity",23,6,3.9,0.18244,0.966727,null,"GO:0018107","peptidyl-threonine phosphorylation",12,4,2.38,0.20017,0.979044]
["GO:0045828","positive regulation of isoprenoid metabolic process",17,3,2.02,0.32815,1,null,"GO:0080001","mucilage extrusion from seed coat",12,3,2.23,0.39025,1,null,"GO:0006094","gluconeogenesis",23,6,3.9,0.18244,0.966727,null,"GO:0070076","histone lysine demethylation",12,4,2.38,0.20017,0.979044]
["GO:0009071","serine family amino acid catabolic process",17,3,2.02,0.32815,1,null,"GO:0010227","floral organ abscission",12,3,2.23,0.39025,1,null,"GO:0034641","cellular nitrogen compound metabolic process",6078,866,1030.31,0.18436,0.969086,null,"GO:1901703","protein localization involved in auxin polar transport",12,4,2.38,0.20017,0.979044]
["GO:2000023","regulation of lateral root development",17,3,2.02,0.32815,1,null,"GO:0005977","glycogen metabolic process",12,3,2.23,0.39025,1,null,"GO:0008643","carbohydrate transport",42,10,7.12,0.18474,0.969086,null,"GO:0010310","regulation of hydrogen peroxide metabolic process",12,4,2.38,0.20017,0.979044]
["GO:0005983","starch catabolic process",17,3,2.02,0.32815,1,null,"GO:0045332","phospholipid translocation",12,3,2.23,0.39025,1,null,"GO:0009880","embryonic pattern specification",20,5,3.39,0.18492,0.969086,null,"GO:0048015","phosphatidylinositol-mediated signaling",12,4,2.38,0.20017,0.979044]
["GO:0071365","cellular response to auxin stimulus",112,14,13.3,0.32823,1,null,"GO:0062014","negative regulation of small molecule metabolic process",12,3,2.23,0.39025,1,null,"GO:0015850","organic hydroxy compound transport",20,5,3.39,0.18492,0.969086,null,"GO:0009875","pollen-pistil interaction",24,6,4.75,0.20024,0.979044]
["GO:1901135","carbohydrate derivative metabolic process",871,131,103.39,0.3324,1,null,"GO:0019375","galactolipid biosynthetic process",12,3,2.23,0.39025,1,null,"GO:0009086","methionine biosynthetic process",21,5,3.56,0.18494,0.969086,null,"GO:0009856","pollination",214,43,42.38,0.20035,0.979044]
["GO:0009070","serine family amino acid biosynthetic process",38,10,4.51,0.33565,1,null,"GO:0060321","acceptance of pollen",12,3,2.23,0.39025,1,null,"GO:1901700","response to oxygen-containing compound",2791,827,473.12,0.18819,0.983929,null,"GO:0009889","regulation of biosynthetic process",1878,482,371.92,0.20614,1]
["GO:0048598","embryonic morphogenesis",28,6,3.32,0.33629,1,null,"GO:0051240","positive regulation of multicellular organismal process",77,15,14.29,0.39027,1,null,"GO:0009846","pollen germination",59,13,10,0.18975,0.98989,null,"GO:0009646","response to absence of light",38,10,7.53,0.20617,1]
["GO:0044093","positive regulation of molecular function",81,11,9.62,0.33658,1,null,"GO:0010167","response to nitrate",17,4,3.16,0.39044,1,null,"GO:0009863","salicylic acid mediated signaling pathway",90,20,15.26,0.19314,1,null,"GO:0007033","vacuole organization",69,15,13.66,0.20653,1]
["GO:0033314","mitotic DNA replication checkpoint signaling",10,2,1.19,0.33671,1,null,"GO:0034308","primary alcohol metabolic process",17,4,3.16,0.39044,1,null,"GO:0006520","amino acid metabolic process",524,102,88.83,0.19429,1,null,"GO:0051254","positive regulation of RNA metabolic process",362,88,71.69,0.20848,1]
["GO:1902905","positive regulation of supramolecular fiber organization",10,2,1.19,0.33671,1,null,"GO:0009269","response to desiccation",17,4,3.16,0.39044,1,null,"GO:0043161","proteasome-mediated ubiquitin-dependent protein catabolic process",210,45,35.6,0.19477,1,null,"GO:0009965","leaf morphogenesis",81,20,16.04,0.21028,1]
["GO:0000731","DNA synthesis involved in DNA repair",10,2,1.19,0.33671,1,null,"GO:0006306","DNA methylation",37,6,6.87,0.39065,1,null,"GO:0048519","negative regulation of biological process",1368,282,231.9,0.19576,1,null,"GO:0042594","response to starvation",138,33,27.33,0.2113,1]
["GO:0051495","positive regulation of cytoskeleton organization",10,2,1.19,0.33671,1,null,"GO:1905039","carboxylic acid transmembrane transport",45,8,8.35,0.39078,1,null,"GO:0071407","cellular response to organic cyclic compound",271,51,45.94,0.19656,1,null,"GO:0023052","signaling",1631,415,323,0.21233,1]
["GO:0033157","regulation of intracellular protein transport",10,2,1.19,0.33671,1,null,"GO:1901362","organic cyclic compound biosynthetic process",2415,400,448.2,0.39446,1,null,"GO:0006952","defense response",1953,472,331.06,0.20031,1,null,"GO:0051607","defense response to virus",49,11,9.7,0.21244,1]
["GO:0046739","transport of virus in multicellular host",10,2,1.19,0.33671,1,null,"GO:0042435","indole-containing compound biosynthetic process",79,17,14.66,0.39807,1,null,"GO:0016050","vesicle organization",99,26,16.78,0.20082,1,null,"GO:0042542","response to hydrogen peroxide",61,15,12.08,0.21422,1]
["GO:2000037","regulation of stomatal complex patterning",10,2,1.19,0.33671,1,null,"GO:0002181","cytoplasmic translation",77,12,14.29,0.40027,1,null,"GO:0048584","positive regulation of response to stimulus",239,56,40.51,0.20107,1,null,"GO:0006796","phosphate-containing compound metabolic process",1326,311,262.6,0.21464,1]
["GO:0071267","L-methionine salvage",10,2,1.19,0.33671,1,null,"GO:0048767","root hair elongation",57,11,10.58,0.40961,1,null,"GO:0006625","protein targeting to peroxisome",17,7,2.88,0.2014,1,null,"GO:0044270","cellular nitrogen compound catabolic process",235,55,46.54,0.21588,1]
["GO:0009554","megasporogenesis",10,2,1.19,0.33671,1,null,"GO:0042742","defense response to bacterium",645,123,119.7,0.41425,1,null,"GO:0006906","vesicle fusion",44,10,7.46,0.20142,1,null,"GO:0048827","phyllome development",617,166,122.19,0.21597,1]
["GO:0010065","primary meristem tissue development",10,2,1.19,0.33671,1,null,"GO:0051128","regulation of cellular component organization",241,32,44.73,0.42076,1,null,"GO:0072593","reactive oxygen species metabolic process",117,26,19.83,0.20144,1,null,"GO:0071704","organic substance metabolic process",9667,2018,1914.43,0.21833,1]
["GO:0019740","nitrogen utilization",10,2,1.19,0.33671,1,null,"GO:0009072","aromatic amino acid metabolic process",98,18,18.19,0.42196,1,null,"GO:0000956","nuclear-transcribed mRNA catabolic process",61,16,10.34,0.20153,1,null,"GO:0007052","mitotic spindle organization",21,6,4.16,0.22343,1]
["GO:0006102","isocitrate metabolic process",10,2,1.19,0.33671,1,null,"GO:0080022","primary root development",23,5,4.27,0.42847,1,null,"GO:0015914","phospholipid transport",17,4,2.88,0.20174,1,null,"GO:1990110","callus formation",21,6,4.16,0.22343,1]
["GO:0009303","rRNA transcription",10,2,1.19,0.33671,1,null,"GO:0009567","double fertilization forming a zygote and endosperm",23,5,4.27,0.42847,1,null,"GO:0045732","positive regulation of protein catabolic process",28,5,4.75,0.20184,1,null,"GO:0010091","trichome branching",21,6,4.16,0.22343,1]
["GO:0051090","regulation of DNA-binding transcription factor activity",10,2,1.19,0.33671,1,null,"GO:0071897","DNA biosynthetic process",23,5,4.27,0.42847,1,null,"GO:0061136","regulation of proteasomal protein catabolic process",30,5,5.09,0.20188,1,null,"GO:0009306","protein secretion",21,6,4.16,0.22343,1]
["GO:0051055","negative regulation of lipid biosynthetic process",10,2,1.19,0.33671,1,null,"GO:0009788","negative regulation of abscisic acid-activated signaling pathway",44,9,8.17,0.43261,1,null,"GO:0009225","nucleotide-sugar metabolic process",51,7,8.65,0.20206,1,null,"GO:0008380","RNA splicing",297,69,58.82,0.22862,1]
["GO:0043101","purine-containing compound salvage",10,2,1.19,0.33671,1,null,"GO:0006486","protein glycosylation",115,19,21.34,0.43346,1,null,"GO:0006570","tyrosine metabolic process",14,4,2.37,0.20225,1,null,"GO:0009873","ethylene-activated signaling pathway",62,18,12.28,0.23016,1]
["GO:0031930","mitochondria-nucleus signaling pathway",10,2,1.19,0.33671,1,null,"GO:0009833","plant-type primary cell wall biogenesis",18,4,3.34,0.43602,1,null,"GO:0010225","response to UV-C",14,4,2.37,0.20225,1,null,"GO:0009631","cold acclimation",39,10,7.72,0.23132,1]
["GO:0009166","nucleotide catabolic process",10,2,1.19,0.33671,1,null,"GO:0009585","red, far-red light phototransduction",18,4,3.34,0.43602,1,null,"GO:1902584","positive regulation of response to water deprivation",14,4,2.37,0.20225,1,null,"GO:0090332","stomatal closure",43,13,8.52,0.23439,1]
["GO:0090114","COPII-coated vesicle budding",21,3,2.49,0.33678,1,null,"GO:0006568","tryptophan metabolic process",37,7,6.87,0.43618,1,null,"GO:0046620","regulation of organ growth",14,4,2.37,0.20225,1,null,"GO:0006098","pentose-phosphate shunt",28,10,5.55,0.2344,1]
["GO:0016073","snRNA metabolic process",26,3,3.09,0.33691,1,null,"GO:0043255","regulation of carbohydrate biosynthetic process",45,5,8.35,0.43722,1,null,"GO:0035999","tetrahydrofolate interconversion",14,4,2.37,0.20225,1,null,"GO:0040029","epigenetic regulation of gene expression",133,31,26.34,0.23462,1]
["GO:0009739","response to gibberellin",108,12,12.82,0.34285,1,null,"GO:0006520","amino acid metabolic process",435,87,80.73,0.43755,1,null,"GO:0035825","homologous recombination",62,5,10.51,0.20249,1,null,"GO:0042537","benzene-containing compound metabolic process",49,12,9.7,0.23489,1]
["GO:0070542","response to fatty acid",565,70,67.07,0.34405,1,null,"GO:0033554","cellular response to stress",962,201,178.54,0.43842,1,null,"GO:0071826","ribonucleoprotein complex subunit organization",124,15,21.02,0.20256,1,null,"GO:0010167","response to nitrate",17,5,3.37,0.23504,1]
["GO:0010638","positive regulation of organelle organization",35,6,4.15,0.34445,1,null,"GO:0048827","phyllome development",617,116,114.51,0.44109,1,null,"GO:0000398","mRNA splicing, via spliceosome",211,40,35.77,0.20447,1,null,"GO:0008285","negative regulation of cell population proliferation",17,5,3.37,0.23504,1]
["GO:0010088","phloem development",25,4,2.97,0.34473,1,null,"GO:0072593","reactive oxygen species metabolic process",103,21,19.12,0.44409,1,null,"GO:0055082","intracellular chemical homeostasis",186,54,31.53,0.20454,1,null,"GO:0006415","translational termination",17,5,3.37,0.23504,1]
["GO:0051173","positive regulation of nitrogen compound metabolic process",636,59,75.5,0.34728,1,null,"GO:0006526","arginine biosynthetic process",13,3,2.41,0.44443,1,null,"GO:0009072","aromatic amino acid metabolic process",126,23,21.36,0.20508,1,null,"GO:0051276","chromosome organization",155,30,30.7,0.23558,1]
["GO:0010082","regulation of root meristem growth",33,5,3.92,0.35366,1,null,"GO:0010196","nonphotochemical quenching",13,3,2.41,0.44443,1,null,"GO:0006366","transcription by RNA polymerase II",358,67,60.69,0.20789,1,null,"GO:0098542","defense response to other organism",1363,315,269.93,0.24174,1]
["GO:0010051","xylem and phloem pattern formation",80,13,9.5,0.35784,1,null,"GO:0006535","cysteine biosynthetic process from serine",13,3,2.41,0.44443,1,null,"GO:0043043","peptide biosynthetic process",580,42,98.32,0.20848,1,null,"GO:0009926","auxin polar transport",77,24,15.25,0.24224,1]
["GO:0010817","regulation of hormone levels",219,35,26,0.35986,1,null,"GO:0035195","miRNA-mediated gene silencing",13,3,2.41,0.44443,1,null,"GO:0071446","cellular response to salicylic acid stimulus",119,27,20.17,0.20873,1,null,"GO:0051726","regulation of cell cycle",163,37,32.28,0.24338,1]
["GO:0050829","defense response to Gram-negative bacterium",18,3,2.14,0.36235,1,null,"GO:0050688","regulation of defense response to virus",13,3,2.41,0.44443,1,null,"GO:0009585","red, far-red light phototransduction",19,5,3.22,0.20885,1,null,"GO:0009825","multidimensional cell growth",26,7,5.15,0.2442,1]
["GO:0031408","oxylipin biosynthetic process",18,3,2.14,0.36235,1,null,"GO:0046513","ceramide biosynthetic process",13,3,2.41,0.44443,1,null,"GO:0006893","Golgi to plasma membrane transport",19,5,3.22,0.20885,1,null,"GO:2000012","regulation of auxin polar transport",26,7,5.15,0.2442,1]
["GO:0006144","purine nucleobase metabolic process",18,3,2.14,0.36235,1,null,"GO:1900425","negative regulation of defense response to bacterium",13,3,2.41,0.44443,1,null,"GO:0090407","organophosphate biosynthetic process",322,57,54.58,0.21053,1,null,"GO:0006955","immune response",211,46,41.79,0.24602,1]
["GO:0018130","heterocycle biosynthetic process",2664,337,316.24,0.36368,1,null,"GO:0019359","nicotinamide nucleotide biosynthetic process",13,3,2.41,0.44443,1,null,"GO:0010243","response to organonitrogen compound",159,36,26.95,0.22013,1,null,"GO:0009812","flavonoid metabolic process",120,22,23.76,0.24647,1]
["GO:0009749","response to glucose",65,9,7.72,0.365,1,null,"GO:0019321","pentose metabolic process",13,3,2.41,0.44443,1,null,"GO:0033554","cellular response to stress",1112,257,188.5,0.22699,1,null,"GO:0009828","plant-type cell wall loosening",13,4,2.57,0.24661,1]
["GO:1901362","organic cyclic compound biosynthetic process",2927,372,347.46,0.36708,1,null,"GO:0007292","female gamete generation",13,3,2.41,0.44443,1,null,"GO:0048580","regulation of post-embryonic development",414,92,70.18,0.22876,1,null,"GO:0009396","folic acid-containing compound biosynthetic process",13,4,2.57,0.24661,1]
["GO:0080147","root hair cell development",98,13,11.63,0.37292,1,null,"GO:0080186","developmental vegetative growth",13,3,2.41,0.44443,1,null,"GO:0009893","positive regulation of metabolic process",857,202,145.27,0.22914,1,null,"GO:0051701","biological process involved in interaction with host",13,4,2.57,0.24661,1]
["GO:0009813","flavonoid biosynthetic process",98,17,11.63,0.37657,1,null,"GO:0010497","plasmodesmata-mediated intercellular transport",13,3,2.41,0.44443,1,null,"GO:0046395","carboxylic acid catabolic process",156,43,26.44,0.23021,1,null,"GO:0019321","pentose metabolic process",13,4,2.57,0.24661,1]
["GO:0046394","carboxylic acid biosynthetic process",565,98,67.07,0.37743,1,null,"GO:0006816","calcium ion transport",47,9,8.72,0.44451,1,null,"GO:0006885","regulation of pH",38,19,6.44,0.23088,1,null,"GO:1902182","shoot apical meristem development",13,4,2.57,0.24661,1]
["GO:2000022","regulation of jasmonic acid mediated signaling pathway",34,5,4.04,0.37839,1,null,"GO:0009744","response to sucrose",55,11,10.21,0.44526,1,null,"GO:0006787","porphyrin-containing compound catabolic process",49,19,8.31,0.23118,1,null,"GO:0007292","female gamete generation",13,4,2.57,0.24661,1]
["GO:0042446","hormone biosynthetic process",45,13,5.34,0.38021,1,null,"GO:0032984","protein-containing complex disassembly",63,9,11.69,0.44527,1,null,"GO:0098657","import into cell",30,10,5.09,0.23213,1,null,"GO:0006338","chromatin remodeling",121,28,23.96,0.24664,1]
["GO:0006635","fatty acid beta-oxidation",42,6,4.99,0.3811,1,null,"GO:0061024","membrane organization",222,24,41.2,0.44906,1,null,"GO:0019252","starch biosynthetic process",35,8,5.93,0.23217,1,null,"GO:0030148","sphingolipid biosynthetic process",34,8,6.73,0.24664,1]
["GO:0001522","pseudouridine synthesis",23,5,2.73,0.38153,1,null,"GO:0044270","cellular nitrogen compound catabolic process",235,40,43.61,0.44997,1,null,"GO:0009629","response to gravity",96,20,16.27,0.23233,1,null,"GO:1903008","organelle disassembly",31,7,6.14,0.24672,1]
["GO:0010192","mucilage biosynthetic process",27,5,3.21,0.38164,1,null,"GO:0022622","root system development",702,106,130.28,0.45112,1,null,"GO:0009308","amine metabolic process",114,22,19.32,0.2325,1,null,"GO:0009867","jasmonic acid mediated signaling pathway",116,24,22.97,0.24775,1]
["GO:0032956","regulation of actin cytoskeleton organization",33,5,3.92,0.38182,1,null,"GO:0006551","leucine metabolic process",19,8,3.53,0.45287,1,null,"GO:0009240","isopentenyl diphosphate biosynthetic process",21,5,3.56,0.2327,1,null,"GO:0048519","negative regulation of biological process",1210,304,239.63,0.24918,1]
["GO:0002218","activation of innate immune response",43,6,5.1,0.38186,1,null,"GO:0098739","import across plasma membrane",25,7,4.64,0.4533,1,null,"GO:0006598","polyamine catabolic process",10,3,1.7,0.23272,1,null,"GO:0019439","aromatic compound catabolic process",254,58,50.3,0.25549,1]
["GO:0009094","L-phenylalanine biosynthetic process",11,2,1.31,0.38191,1,null,"GO:0031330","negative regulation of cellular catabolic process",19,5,3.53,0.45349,1,null,"GO:1900368","regulation of post-transcriptional gene silencing by RNA",10,3,1.7,0.23272,1,null,"GO:0008283","cell population proliferation",60,19,11.88,0.25554,1]
["GO:0010444","guard mother cell differentiation",11,2,1.31,0.38191,1,null,"GO:1903338","regulation of cell wall organization or biogenesis",23,5,4.27,0.45364,1,null,"GO:0051055","negative regulation of lipid biosynthetic process",10,3,1.7,0.23272,1,null,"GO:0042592","homeostatic process",350,91,69.31,0.25577,1]
["GO:0000712","resolution of meiotic recombination intermediates",11,2,1.31,0.38191,1,null,"GO:0055085","transmembrane transport",576,110,106.9,0.45372,1,null,"GO:0019320","hexose catabolic process",10,3,1.7,0.23272,1,null,"GO:0007031","peroxisome organization",38,13,7.53,0.25583,1]
["GO:0006655","phosphatidylglycerol biosynthetic process",11,2,1.31,0.38191,1,null,"GO:0048232","male gamete generation",38,7,7.05,0.4538,1,null,"GO:0006116","NADH oxidation",10,3,1.7,0.23272,1,null,"GO:0009880","embryonic pattern specification",20,7,3.96,0.25627,1]
["GO:0009861","jasmonic acid and ethylene-dependent systemic resistance",11,2,1.31,0.38191,1,null,"GO:0042362","fat-soluble vitamin biosynthetic process",21,3,3.9,0.45397,1,null,"GO:0006102","isocitrate metabolic process",10,3,1.7,0.23272,1,null,"GO:0009251","glucan catabolic process",23,7,4.55,0.25638,1]
["GO:0006349","regulation of gene expression by genomic imprinting",11,2,1.31,0.38191,1,null,"GO:0048359","mucilage metabolic process involved in seed coat development",21,3,3.9,0.45397,1,null,"GO:0061817","endoplasmic reticulum-plasma membrane tethering",10,3,1.7,0.23272,1,null,"GO:0009698","phenylpropanoid metabolic process",64,15,12.67,0.2564,1]
["GO:0048363","mucilage pectin metabolic process",11,2,1.31,0.38191,1,null,"GO:0016236","macroautophagy",39,6,7.24,0.45404,1,null,"GO:0009445","putrescine metabolic process",10,3,1.7,0.23272,1,null,"GO:0050684","regulation of mRNA processing",34,9,6.73,0.25641,1]
["GO:0044843","cell cycle G1/S phase transition",11,2,1.31,0.38191,1,null,"GO:0051130","positive regulation of cellular component organization",41,3,7.61,0.45474,1,null,"GO:0007041","lysosomal transport",10,3,1.7,0.23272,1,null,"GO:0010208","pollen wall assembly",24,7,4.75,0.25641,1]
["GO:0000578","embryonic axis specification",11,2,1.31,0.38191,1,null,"GO:0009150","purine ribonucleotide metabolic process",161,19,29.88,0.45605,1,null,"GO:0010161","red light signaling pathway",10,3,1.7,0.23272,1,null,"GO:0000466","maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)",20,6,3.96,0.25645,1]
["GO:0009608","response to symbiont",11,2,1.31,0.38191,1,null,"GO:0009117","nucleotide metabolic process",259,36,48.07,0.45631,1,null,"GO:1990573","potassium ion import across plasma membrane",10,3,1.7,0.23272,1,null,"GO:0008299","isoprenoid biosynthetic process",129,22,25.55,0.25745,1]
["GO:0030656","regulation of vitamin metabolic process",11,2,1.31,0.38191,1,null,"GO:0009561","megagametogenesis",54,12,10.02,0.45686,1,null,"GO:0046113","nucleobase catabolic process",10,3,1.7,0.23272,1,null,"GO:0071496","cellular response to external stimulus",163,41,32.28,0.25762,1]
["GO:0046654","tetrahydrofolate biosynthetic process",11,2,1.31,0.38191,1,null,"GO:0010183","pollen tube guidance",29,6,5.38,0.45737,1,null,"GO:0050684","regulation of mRNA processing",35,7,5.93,0.23276,1,null,"GO:0045165","cell fate commitment",45,15,8.91,0.25799,1]
["GO:0046128","purine ribonucleoside metabolic process",11,2,1.31,0.38191,1,null,"GO:0021700","developmental maturation",276,58,51.22,0.45898,1,null,"GO:0043484","regulation of RNA splicing",35,7,5.93,0.23276,1,null,"GO:0009225","nucleotide-sugar metabolic process",42,12,8.32,0.25832,1]
["GO:0040034","regulation of development, heterochronic",42,4,4.99,0.38232,1,null,"GO:0009765","photosynthesis, light harvesting",25,8,4.64,0.45946,1,null,"GO:0009937","regulation of gibberellic acid mediated signaling pathway",24,4,4.07,0.23295,1,null,"GO:0009894","regulation of catabolic process",149,33,29.51,0.25835,1]
["GO:0031668","cellular response to extracellular stimulus",197,19,23.39,0.38316,1,null,"GO:0034620","cellular response to unfolded protein",31,9,5.75,0.45948,1,null,"GO:2000242","negative regulation of reproductive process",69,9,11.7,0.23338,1,null,"GO:0065001","specification of axis polarity",23,7,4.55,0.25849,1]
["GO:0140053","mitochondrial gene expression",65,16,7.72,0.39556,1,null,"GO:0016106","sesquiterpenoid biosynthetic process",26,7,4.83,0.45962,1,null,"GO:0031667","response to nutrient levels",233,75,39.5,0.23433,1,null,"GO:0006544","glycine metabolic process",15,4,2.97,0.25869,1]
["GO:0006779","porphyrin-containing compound biosynthetic process",106,20,12.58,0.3957,1,null,"GO:0006766","vitamin metabolic process",86,18,15.96,0.45964,1,null,"GO:0042364","water-soluble vitamin biosynthetic process",51,12,8.65,0.23983,1,null,"GO:0032386","regulation of intracellular transport",15,4,2.97,0.25869,1]
["GO:0000963","mitochondrial RNA processing",32,6,3.8,0.39579,1,null,"GO:0010942","positive regulation of cell death",27,7,5.01,0.45965,1,null,"GO:0006535","cysteine biosynthetic process from serine",15,4,2.54,0.24121,1,null,"GO:0006900","vesicle budding from membrane",45,13,8.91,0.25871,1]
["GO:0001676","long-chain fatty acid metabolic process",50,10,5.94,0.39624,1,null,"GO:0071941","nitrogen cycle metabolic process",14,4,2.6,0.45972,1,null,"GO:0006353","DNA-templated transcription termination",15,4,2.54,0.24121,1,null,"GO:0006903","vesicle targeting",16,4,3.17,0.25872,1]
["GO:0009074","aromatic amino acid family catabolic process",19,3,2.26,0.39625,1,null,"GO:0016116","carotenoid metabolic process",36,8,6.68,0.45974,1,null,"GO:1902456","regulation of stomatal opening",15,4,2.54,0.24121,1,null,"GO:0071826","ribonucleoprotein complex subunit organization",125,25,24.75,0.2588,1]
["GO:0009585","red, far-red light phototransduction",19,3,2.26,0.39625,1,null,"GO:0035304","regulation of protein dephosphorylation",27,6,5.01,0.45978,1,null,"GO:0016122","xanthophyll metabolic process",15,4,2.54,0.24121,1,null,"GO:0048285","organelle fission",176,35,34.85,0.25881,1]
["GO:0006760","folic acid-containing compound metabolic process",34,8,4.04,0.39625,1,null,"GO:0045089","positive regulation of innate immune response",50,10,9.28,0.45982,1,null,"GO:0046283","anthocyanin-containing compound metabolic process",61,11,10.34,0.24137,1,null,"GO:0051246","regulation of protein metabolic process",308,67,61,0.25916,1]
["GO:0007029","endoplasmic reticulum organization",31,4,3.68,0.39639,1,null,"GO:1902904","negative regulation of supramolecular fiber organization",13,3,2.41,0.45983,1,null,"GO:2000070","regulation of response to water deprivation",34,9,5.76,0.24194,1,null,"GO:0010099","regulation of photomorphogenesis",35,9,6.93,0.25926,1]
["GO:0006730","one-carbon metabolic process",18,5,2.14,0.39643,1,null,"GO:0051494","negative regulation of cytoskeleton organization",13,3,2.41,0.45983,1,null,"GO:0046856","phosphatidylinositol dephosphorylation",20,5,3.39,0.24231,1,null,"GO:0051260","protein homooligomerization",22,6,4.36,0.25938,1]
["GO:1902532","negative regulation of intracellular signal transduction",20,5,2.37,0.39647,1,null,"GO:0034312","diol biosynthetic process",13,3,2.41,0.45983,1,null,"GO:0010167","response to nitrate",20,5,3.39,0.24231,1,null,"GO:0010305","leaf vascular tissue pattern formation",22,6,4.36,0.25938,1]
["GO:0070828","heterochromatin organization",41,7,4.87,0.39654,1,null,"GO:0030833","regulation of actin filament polymerization",13,3,2.41,0.45983,1,null,"GO:0009850","auxin metabolic process",56,11,9.49,0.24234,1,null,"GO:0009958","positive gravitropism",22,6,4.36,0.25938,1]
["GO:0006555","methionine metabolic process",25,5,2.97,0.39656,1,null,"GO:0051788","response to misfolded protein",25,5,4.64,0.45986,1,null,"GO:0009718","anthocyanin-containing compound biosynthetic process",34,7,5.76,0.2424,1,null,"GO:0044087","regulation of cellular component biogenesis",77,15,15.25,0.25989,1]
["GO:0031099","regeneration",19,4,2.26,0.39661,1,null,"GO:0035510","DNA dealkylation",27,5,5.01,0.45991,1,null,"GO:0006874","intracellular calcium ion homeostasis",46,10,7.8,0.24396,1,null,"GO:0009910","negative regulation of flower development",45,11,8.91,0.26799,1]
["GO:0009062","fatty acid catabolic process",46,7,5.46,0.39664,1,null,"GO:0006664","glycolipid metabolic process",51,9,9.47,0.45998,1,null,"GO:0009909","regulation of flower development",156,26,26.44,0.2485,1,null,"GO:0046907","intracellular transport",651,150,128.92,0.27102,1]
["GO:0009396","folic acid-containing compound biosynthetic process",15,3,1.78,0.39669,1,null,"GO:0019932","second-messenger-mediated signaling",36,6,6.68,0.46001,1,null,"GO:0055088","lipid homeostasis",41,9,6.95,0.25065,1,null,"GO:0009845","seed germination",157,44,31.09,0.27112,1]
["GO:0009119","ribonucleoside metabolic process",15,3,1.78,0.39669,1,null,"GO:0030705","cytoskeleton-dependent intracellular transport",20,3,3.71,0.46001,1,null,"GO:0009967","positive regulation of signal transduction",82,23,13.9,0.2552,1,null,"GO:0035196","miRNA processing",29,10,5.74,0.27549,1]
["GO:0034504","protein localization to nucleus",51,7,6.05,0.39673,1,null,"GO:0006898","receptor-mediated endocytosis",32,5,5.94,0.46004,1,null,"GO:0042221","response to chemical",4174,1128,707.56,0.25576,1,null,"GO:0043255","regulation of carbohydrate biosynthetic process",45,13,8.91,0.27553,1]
["GO:0007093","mitotic cell cycle checkpoint signaling",29,4,3.44,0.3968,1,null,"GO:0043162","ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway",17,2,3.16,0.46007,1,null,"GO:0097659","nucleic acid-templated transcription",1970,414,333.94,0.25757,1,null,"GO:0009955","adaxial/abaxial pattern specification",39,11,7.72,0.27573,1]
["GO:0007091","metaphase/anaphase transition of mitotic cell cycle",21,3,2.49,0.3968,1,null,"GO:0042168","heme metabolic process",24,3,4.45,0.46011,1,null,"GO:0009658","chloroplast organization",219,42,37.12,0.25862,1,null,"GO:0031507","heterochromatin formation",31,9,6.14,0.27584,1]
["GO:0046434","organophosphate catabolic process",39,5,4.63,0.39683,1,null,"GO:0009250","glucan biosynthetic process",107,15,19.86,0.46057,1,null,"GO:0036293","response to decreased oxygen levels",279,109,47.29,0.26143,1,null,"GO:0009944","polarity specification of adaxial/abaxial axis",18,5,3.56,0.2762,1]
["GO:0010965","regulation of mitotic sister chromatid separation",14,2,1.66,0.39683,1,null,"GO:0048523","negative regulation of cellular process",544,93,100.96,0.46073,1,null,"GO:0065008","regulation of biological quality",480,86,81.37,0.26404,1,null,"GO:0009833","plant-type primary cell wall biogenesis",18,5,3.56,0.2762,1]
["GO:0071368","cellular response to cytokinin stimulus",65,8,7.72,0.39684,1,null,"GO:0072522","purine-containing compound biosynthetic process",113,14,20.97,0.46086,1,null,"GO:0010629","negative regulation of gene expression",299,50,50.69,0.26501,1,null,"GO:0009556","microsporogenesis",18,5,3.56,0.2762,1]
["GO:0072595","maintenance of protein localization in organelle",15,2,1.78,0.39685,1,null,"GO:0006753","nucleoside phosphate metabolic process",269,37,49.92,0.46168,1,null,"GO:0071496","cellular response to external stimulus",203,64,34.41,0.26603,1,null,"GO:0000380","alternative mRNA splicing, via spliceosome",18,5,3.56,0.2762,1]
["GO:0008064","regulation of actin polymerization or depolymerization",17,2,2.02,0.39689,1,null,"GO:0043603","amide metabolic process",706,92,131.03,0.46218,1,null,"GO:0009767","photosynthetic electron transport chain",54,20,9.15,0.26842,1,null,"GO:0060586","multicellular organismal-level iron ion homeostasis",18,5,3.56,0.2762,1]
["GO:0016131","brassinosteroid metabolic process",17,2,2.02,0.39689,1,null,"GO:0022402","cell cycle process",446,46,82.77,0.465,1,null,"GO:0042908","xenobiotic transport",38,15,6.44,0.26903,1,null,"GO:0009959","negative gravitropism",18,5,3.56,0.2762,1]
["GO:0032271","regulation of protein polymerization",19,2,2.26,0.39693,1,null,"GO:0009411","response to UV",90,23,16.7,0.46595,1,null,"GO:0120255","olefinic compound biosynthetic process",53,17,8.98,0.2691,1,null,"GO:0048588","developmental cell growth",190,36,37.63,0.27854,1]
["GO:0051345","positive regulation of hydrolase activity",38,2,4.51,0.39729,1,null,"GO:0034654","nucleobase-containing compound biosynthetic process",1881,296,349.09,0.46678,1,null,"GO:0009117","nucleotide metabolic process",282,55,47.8,0.26921,1,null,"GO:0046394","carboxylic acid biosynthetic process",457,82,90.5,0.28964,1]
["GO:0043487","regulation of RNA stability",64,4,7.6,0.39746,1,null,"GO:0071695","anatomical structure maturation",258,55,47.88,0.4668,1,null,"GO:0051241","negative regulation of multicellular organismal process",128,28,21.7,0.26934,1,null,"GO:0043170","macromolecule metabolic process",7591,1586,1503.31,0.29003,1]
["GO:0032940","secretion by cell",66,3,7.83,0.39766,1,null,"GO:0031323","regulation of cellular metabolic process",2443,383,453.39,0.4712,1,null,"GO:0006665","sphingolipid metabolic process",49,14,8.31,0.26943,1,null,"GO:0009734","auxin-activated signaling pathway",76,24,15.05,0.29105,1]
["GO:1905393","plant organ formation",116,20,13.77,0.39929,1,null,"GO:0097305","response to alcohol",942,231,174.82,0.47121,1,null,"GO:0098661","inorganic anion transmembrane transport",34,10,5.76,0.26964,1,null,"GO:0042538","hyperosmotic salinity response",46,11,9.11,0.29393,1]
["GO:0010187","negative regulation of seed germination",27,4,3.21,0.40133,1,null,"GO:0010035","response to inorganic substance",1453,362,269.66,0.47281,1,null,"GO:0015919","peroxisomal membrane transport",18,7,3.05,0.26968,1,null,"GO:0048571","long-day photoperiodism",51,16,10.1,0.29394,1]
["GO:0043650","dicarboxylic acid biosynthetic process",27,4,3.21,0.40133,1,null,"GO:1901701","cellular response to oxygen-containing compound",970,184,180.02,0.47658,1,null,"GO:0044273","sulfur compound catabolic process",21,7,3.56,0.26975,1,null,"GO:0009750","response to fructose",14,4,2.77,0.29503,1]
["GO:0010380","regulation of chlorophyll biosynthetic process",27,4,3.21,0.40133,1,null,"GO:0072523","purine-containing compound catabolic process",19,4,3.53,0.48057,1,null,"GO:0019395","fatty acid oxidation",48,11,8.14,0.26983,1,null,"GO:1900057","positive regulation of leaf senescence",14,4,2.77,0.29503,1]
["GO:0048437","floral organ development",200,27,23.74,0.40206,1,null,"GO:0006284","base-excision repair",19,4,3.53,0.48057,1,null,"GO:1901570","fatty acid derivative biosynthetic process",40,8,6.78,0.27006,1,null,"GO:0005983","starch catabolic process",14,4,2.77,0.29503,1]
["GO:0014070","response to organic cyclic compound",716,77,84.99,0.40773,1,null,"GO:0010555","response to mannitol",19,4,3.53,0.48057,1,null,"GO:0051261","protein depolymerization",36,7,6.1,0.27011,1,null,"GO:0009682","induced systemic resistance",14,4,2.77,0.29503,1]
["GO:0009698","phenylpropanoid metabolic process",93,17,11.04,0.42434,1,null,"GO:0019674","NAD metabolic process",19,4,3.53,0.48057,1,null,"GO:0048825","cotyledon development",44,7,7.46,0.27152,1,null,"GO:0042793","plastid transcription",14,4,2.77,0.29503,1]
["GO:0010948","negative regulation of cell cycle process",54,11,6.41,0.4247,1,null,"GO:0009787","regulation of abscisic acid-activated signaling pathway",102,19,18.93,0.4807,1,null,"GO:0015995","chlorophyll biosynthetic process",96,21,16.27,0.27222,1,null,"GO:0016115","terpenoid catabolic process",14,4,2.77,0.29503,1]
["GO:0010449","root meristem growth",45,7,5.34,0.42546,1,null,"GO:1901136","carbohydrate derivative catabolic process",39,7,7.24,0.48079,1,null,"GO:0006635","fatty acid beta-oxidation",42,9,7.12,0.27471,1,null,"GO:0010374","stomatal complex development",41,9,8.12,0.29511,1]
["GO:0009098","leucine biosynthetic process",12,2,1.42,0.42574,1,null,"GO:0006164","purine nucleotide biosynthetic process",110,13,20.41,0.48302,1,null,"GO:0042537","benzene-containing compound metabolic process",61,16,10.34,0.27599,1,null,"GO:0061077","chaperone-mediated protein folding",55,8,10.89,0.29599,1]
["GO:0006346","DNA methylation-dependent heterochromatin formation",12,2,1.42,0.42574,1,null,"GO:0071472","cellular response to salt stress",30,6,5.57,0.49258,1,null,"GO:0048508","embryonic meristem development",32,9,5.42,0.27652,1,null,"GO:0015718","monocarboxylic acid transport",23,6,4.55,0.29669,1]
["GO:0048658","anther wall tapetum development",12,2,1.42,0.42574,1,null,"GO:1901663","quinone biosynthetic process",32,10,5.94,0.4956,1,null,"GO:0006367","transcription initiation at RNA polymerase II promoter",32,7,5.42,0.27702,1,null,"GO:0009888","tissue development",1119,240,221.6,0.30203,1]
["GO:0045338","farnesyl diphosphate metabolic process",12,2,1.42,0.42574,1,null,"GO:0010112","regulation of systemic acquired resistance",14,3,2.6,0.49658,1,null,"GO:0008284","positive regulation of cell population proliferation",21,5,3.56,0.27705,1,null,"GO:0010605","negative regulation of macromolecule metabolic process",573,144,113.48,0.3117,1]
["GO:0016559","peroxisome fission",12,2,1.42,0.42574,1,null,"GO:0080036","regulation of cytokinin-activated signaling pathway",14,3,2.6,0.49658,1,null,"GO:0002239","response to oomycetes",63,11,10.68,0.27733,1,null,"GO:0018105","peptidyl-serine phosphorylation",80,18,15.84,0.31287,1]
["GO:0031126","sno(s)RNA 3'-end processing",12,2,1.42,0.42574,1,null,"GO:0035999","tetrahydrofolate interconversion",14,3,2.6,0.49658,1,null,"GO:0006811","monoatomic ion transport",270,60,45.77,0.27875,1,null,"GO:0045087","innate immune response",189,41,37.43,0.31406,1]
["GO:0030388","fructose 1,6-bisphosphate metabolic process",12,2,1.42,0.42574,1,null,"GO:0071216","cellular response to biotic stimulus",14,3,2.6,0.49658,1,null,"GO:0006972","hyperosmotic response",69,21,11.7,0.2808,1,null,"GO:0032879","regulation of localization",104,25,20.6,0.31557,1]
["GO:0001934","positive regulation of protein phosphorylation",12,2,1.42,0.42574,1,null,"GO:0010039","response to iron ion",14,3,2.6,0.49658,1,null,"GO:0008299","isoprenoid biosynthetic process",161,34,27.29,0.28128,1,null,"GO:0043648","dicarboxylic acid metabolic process",76,19,15.05,0.31566,1]
["GO:1901001","negative regulation of response to salt stress",12,2,1.42,0.42574,1,null,"GO:0006122","mitochondrial electron transport, ubiquinol to cytochrome c",14,3,2.6,0.49658,1,null,"GO:0046474","glycerophospholipid biosynthetic process",96,19,16.27,0.28134,1,null,"GO:0006084","acetyl-CoA metabolic process",27,7,5.35,0.31613,1]
["GO:0080183","response to photooxidative stress",12,2,1.42,0.42574,1,null,"GO:0046685","response to arsenic-containing substance",14,3,2.6,0.49658,1,null,"GO:0006739","NADP metabolic process",43,13,7.29,0.28148,1,null,"GO:0009687","abscisic acid metabolic process",33,8,6.54,0.31617,1]
["GO:0002252","immune effector process",12,2,1.42,0.42574,1,null,"GO:0051017","actin filament bundle assembly",14,3,2.6,0.49658,1,null,"GO:0009060","aerobic respiration",106,20,17.97,0.2815,1,null,"GO:0032956","regulation of actin cytoskeleton organization",29,7,5.74,0.31621,1]
["GO:0010103","stomatal complex morphogenesis",31,4,3.68,0.4258,1,null,"GO:0002239","response to oomycetes",45,7,8.35,0.49705,1,null,"GO:0010105","negative regulation of ethylene-activated signaling pathway",16,4,2.71,0.28167,1,null,"GO:0071491","cellular response to red light",10,3,1.98,0.31626,1]
["GO:0010212","response to ionizing radiation",26,3,3.09,0.42591,1,null,"GO:0009593","detection of chemical stimulus",25,5,4.64,0.50652,1,null,"GO:0032511","late endosome to vacuole transport via multivesicular body sorting pathway",25,8,4.24,0.28184,1,null,"GO:0009901","anther dehiscence",10,3,1.98,0.31626,1]
["GO:0009809","lignin biosynthetic process",36,5,4.27,0.42767,1,null,"GO:1900150","regulation of defense response to fungus",25,5,4.64,0.50652,1,null,"GO:0002758","innate immune response-activating signaling pathway",32,9,5.42,0.28188,1,null,"GO:0009903","chloroplast avoidance movement",10,3,1.98,0.31626,1]
["GO:0009933","meristem structural organization",87,15,10.33,0.4278,1,null,"GO:0030244","cellulose biosynthetic process",52,7,9.65,0.50758,1,null,"GO:0043547","positive regulation of GTPase activity",34,9,5.76,0.28194,1,null,"GO:0009757","hexose mediated signaling",10,3,1.98,0.31626,1]
["GO:2000070","regulation of response to water deprivation",34,7,4.04,0.42889,1,null,"GO:0009733","response to auxin",255,40,47.33,0.5085,1,null,"GO:0016441","post-transcriptional gene silencing",60,12,10.17,0.28221,1,null,"GO:0006655","phosphatidylglycerol biosynthetic process",10,3,1.98,0.31626,1]
["GO:0071241","cellular response to inorganic substance",28,4,3.32,0.42934,1,null,"GO:0045893","positive regulation of DNA-templated transcription",276,49,51.22,0.51016,1,null,"GO:0031053","primary miRNA processing",11,3,1.86,0.28234,1,null,"GO:0006621","protein retention in ER lumen",10,3,1.98,0.31626,1]
["GO:0009962","regulation of flavonoid biosynthetic process",34,5,4.04,0.42954,1,null,"GO:0051093","negative regulation of developmental process",141,15,26.17,0.51061,1,null,"GO:0009094","L-phenylalanine biosynthetic process",11,3,1.86,0.28234,1,null,"GO:2000068","regulation of defense response to insect",10,3,1.98,0.31626,1]
["GO:0072523","purine-containing compound catabolic process",20,3,2.37,0.42965,1,null,"GO:0050801","monoatomic ion homeostasis",168,42,31.18,0.5169,1,null,"GO:0090110","COPII-coated vesicle cargo loading",11,3,1.86,0.28234,1,null,"GO:0006646","phosphatidylethanolamine biosynthetic process",10,3,1.98,0.31626,1]
["GO:0010233","phloem transport",20,3,2.37,0.42965,1,null,"GO:0009698","phenylpropanoid metabolic process",64,21,11.88,0.51729,1,null,"GO:0009608","response to symbiont",11,3,1.86,0.28234,1,null,"GO:0010262","somatic embryogenesis",10,3,1.98,0.31626,1]
["GO:0010014","meristem initiation",38,5,4.51,0.4297,1,null,"GO:0006091","generation of precursor metabolites and energy",331,70,61.43,0.51737,1,null,"GO:0016973","poly(A)+ mRNA export from nucleus",11,3,1.86,0.28234,1,null,"GO:0019762","glucosinolate catabolic process",10,3,1.98,0.31626,1]
["GO:0048646","anatomical structure formation involved in morphogenesis",215,34,25.52,0.43496,1,null,"GO:0048522","positive regulation of cellular process",695,98,128.98,0.51803,1,null,"GO:0070370","cellular heat acclimation",11,3,1.86,0.28234,1,null,"GO:0030837","negative regulation of actin filament polymerization",10,3,1.98,0.31626,1]
["GO:0009664","plant-type cell wall organization",143,24,16.98,0.44439,1,null,"GO:0009086","methionine biosynthetic process",19,7,3.53,0.51851,1,null,"GO:0015866","ADP transport",11,3,1.86,0.28234,1,null,"GO:0071038","nuclear polyadenylation-dependent tRNA catabolic process",10,3,1.98,0.31626,1]
["GO:0044281","small molecule metabolic process",2654,338,315.05,0.4466,1,null,"GO:0000302","response to reactive oxygen species",122,38,22.64,0.51888,1,null,"GO:0015867","ATP transport",11,3,1.86,0.28234,1,null,"GO:0001934","positive regulation of protein phosphorylation",10,3,1.98,0.31626,1]
["GO:0016485","protein processing",58,10,6.89,0.45093,1,null,"GO:0009688","abscisic acid biosynthetic process",23,6,4.27,0.51888,1,null,"GO:0006075","(1->3)-beta-D-glucan biosynthetic process",11,3,1.86,0.28234,1,null,"GO:0006074","(1->3)-beta-D-glucan metabolic process",10,3,1.98,0.31626,1]
["GO:0090333","regulation of stomatal closure",37,5,4.39,0.45204,1,null,"GO:0002218","activation of innate immune response",38,7,7.05,0.51927,1,null,"GO:0009083","branched-chain amino acid catabolic process",23,4,3.9,0.28253,1,null,"GO:0034765","regulation of monoatomic ion transmembrane transport",10,3,1.98,0.31626,1]
["GO:0045595","regulation of cell differentiation",37,5,4.39,0.45204,1,null,"GO:0009251","glucan catabolic process",23,4,4.27,0.51931,1,null,"GO:0048767","root hair elongation",72,13,12.21,0.28972,1,null,"GO:0046128","purine ribonucleoside metabolic process",10,3,1.98,0.31626,1]
["GO:0010099","regulation of photomorphogenesis",37,5,4.39,0.45204,1,null,"GO:0010208","pollen wall assembly",24,4,4.45,0.51935,1,null,"GO:0015979","photosynthesis",249,73,42.21,0.29004,1,null,"GO:0071407","cellular response to organic cyclic compound",214,52,42.38,0.31634,1]
["GO:0009553","embryo sac development",138,27,16.38,0.45238,1,null,"GO:0052543","callose deposition in cell wall",20,3,3.71,0.51941,1,null,"GO:0019760","glucosinolate metabolic process",211,37,35.77,0.29102,1,null,"GO:0048582","positive regulation of post-embryonic development",65,22,12.87,0.31647,1]
["GO:0010564","regulation of cell cycle process",143,24,16.98,0.45442,1,null,"GO:0006338","chromatin remodeling",121,25,22.46,0.52021,1,null,"GO:0080135","regulation of cellular response to stress",84,13,14.24,0.29369,1,null,"GO:0016073","snRNA metabolic process",26,4,5.15,0.3167,1]
["GO:0015986","proton motive force-driven ATP synthesis",29,4,3.44,0.45698,1,null,"GO:0071554","cell wall organization or biogenesis",543,99,100.77,0.52255,1,null,"GO:0044282","small molecule catabolic process",203,54,34.41,0.29719,1,null,"GO:0009787","regulation of abscisic acid-activated signaling pathway",102,28,20.2,0.31683,1]
["GO:1901137","carbohydrate derivative biosynthetic process",482,75,57.22,0.45844,1,null,"GO:0090630","activation of GTPase activity",20,4,3.71,0.52366,1,null,"GO:0000122","negative regulation of transcription by RNA polymerase II",27,6,4.58,0.30254,1,null,"GO:0006164","purine nucleotide biosynthetic process",110,26,21.78,0.31782,1]
["GO:0009791","post-embryonic development",2302,296,273.26,0.46097,1,null,"GO:0009718","anthocyanin-containing compound biosynthetic process",20,4,3.71,0.52366,1,null,"GO:2000031","regulation of salicylic acid mediated signaling pathway",27,6,4.58,0.30254,1,null,"GO:0006259","DNA metabolic process",468,76,92.68,0.31804,1]
["GO:0010016","shoot system morphogenesis",226,34,26.83,0.46114,1,null,"GO:0009695","jasmonic acid biosynthetic process",20,4,3.71,0.52366,1,null,"GO:0016117","carotenoid biosynthetic process",27,6,4.58,0.30254,1,null,"GO:0001708","cell fate specification",30,8,5.94,0.31842,1]
["GO:0002221","pattern recognition receptor signaling pathway",21,3,2.49,0.46236,1,null,"GO:0045292","mRNA cis splicing, via spliceosome",20,4,3.71,0.52366,1,null,"GO:0062013","positive regulation of small molecule metabolic process",27,6,4.58,0.30254,1,null,"GO:0031537","regulation of anthocyanin metabolic process",19,5,3.76,0.31864,1]
["GO:0032436","positive regulation of proteasomal ubiquitin-dependent protein catabolic process",21,3,2.49,0.46236,1,null,"GO:0032436","positive regulation of proteasomal ubiquitin-dependent protein catabolic process",20,4,3.71,0.52366,1,null,"GO:1901564","organonitrogen compound metabolic process",4995,902,846.73,0.30286,1,null,"GO:0062013","positive regulation of small molecule metabolic process",19,5,3.76,0.31864,1]
["GO:0008361","regulation of cell size",21,3,2.49,0.46236,1,null,"GO:0007267","cell-cell signaling",20,4,3.71,0.52366,1,null,"GO:0045934","negative regulation of nucleobase-containing compound metabolic process",222,56,37.63,0.30857,1,null,"GO:0019674","NAD metabolic process",19,5,3.76,0.31864,1]
["GO:0010027","thylakoid membrane organization",54,7,6.41,0.4634,1,null,"GO:0009648","photoperiodism",255,40,47.33,0.52551,1,null,"GO:0034599","cellular response to oxidative stress",69,16,11.7,0.30928,1,null,"GO:0006893","Golgi to plasma membrane transport",19,5,3.76,0.31864,1]
["GO:0090567","reproductive shoot system development",566,64,67.19,0.46364,1,null,"GO:0033014","tetrapyrrole biosynthetic process",119,20,22.09,0.52791,1,null,"GO:0120254","olefinic compound metabolic process",70,23,11.87,0.30929,1,null,"GO:0044237","cellular metabolic process",8769,1871,1736.59,0.3207,1]
["GO:0051052","regulation of DNA metabolic process",123,24,14.6,0.46683,1,null,"GO:0015995","chlorophyll biosynthetic process",76,14,14.1,0.53273,1,null,"GO:0022411","cellular component disassembly",98,24,16.61,0.30965,1,null,"GO:0019684","photosynthesis, light reaction",121,15,23.96,0.32148,1]
["GO:0044242","cellular lipid catabolic process",97,15,11.51,0.46706,1,null,"GO:0006810","transport",1755,276,325.71,0.53559,1,null,"GO:0072524","pyridine-containing compound metabolic process",66,18,11.19,0.30971,1,null,"GO:0071417","cellular response to organonitrogen compound",33,8,6.54,0.3237,1]
["GO:0000038","very long-chain fatty acid metabolic process",31,7,3.68,0.4671,1,null,"GO:0002237","response to molecule of bacterial origin",75,14,13.92,0.53737,1,null,"GO:0006740","NADPH regeneration",32,10,5.42,0.30992,1,null,"GO:0009226","nucleotide-sugar biosynthetic process",33,8,6.54,0.3237,1]
["GO:0065009","regulation of molecular function",193,28,22.91,0.46759,1,null,"GO:0009636","response to toxic substance",106,29,19.67,0.54364,1,null,"GO:0009583","detection of light stimulus",21,6,3.56,0.31013,1,null,"GO:1901575","organic substance catabolic process",1456,345,288.34,0.33024,1]
["GO:0016553","base conversion or substitution editing",26,8,3.09,0.46763,1,null,"GO:0090333","regulation of stomatal closure",26,5,4.83,0.54393,1,null,"GO:0019374","galactolipid metabolic process",14,4,2.37,0.31021,1,null,"GO:0006914","autophagy",80,19,15.84,0.33433,1]
["GO:0031325","positive regulation of cellular metabolic process",599,56,71.11,0.46778,1,null,"GO:0016117","carotenoid biosynthetic process",26,5,4.83,0.54393,1,null,"GO:0071417","cellular response to organonitrogen compound",38,8,6.44,0.31023,1,null,"GO:0016192","vesicle-mediated transport",462,112,91.49,0.33603,1]
["GO:0048575","short-day photoperiodism, flowering",13,2,1.54,0.46787,1,null,"GO:0010182","sugar mediated signaling pathway",36,6,6.68,0.54424,1,null,"GO:0052482","defense response by cell wall thickening",17,4,2.88,0.31026,1,null,"GO:0019318","hexose metabolic process",71,30,14.06,0.33729,1]
["GO:0042128","nitrate assimilation",13,2,1.54,0.46787,1,null,"GO:0006413","translational initiation",54,8,10.02,0.54495,1,null,"GO:0010921","regulation of phosphatase activity",24,5,4.07,0.31028,1,null,"GO:0042221","response to chemical",3410,812,675.31,0.33753,1]
["GO:0032527","protein exit from endoplasmic reticulum",13,2,1.54,0.46787,1,null,"GO:0009071","serine family amino acid catabolic process",15,3,2.78,0.54613,1,null,"GO:2000069","regulation of post-embryonic root development",19,4,3.22,0.31029,1,null,"GO:0045944","positive regulation of transcription by RNA polymerase II",81,18,16.04,0.33829,1]
["GO:0031110","regulation of microtubule polymerization or depolymerization",13,2,1.54,0.46787,1,null,"GO:0006620","post-translational protein targeting to endoplasmic reticulum membrane",15,3,2.78,0.54613,1,null,"GO:0031407","oxylipin metabolic process",20,4,3.39,0.31031,1,null,"GO:0033365","protein localization to organelle",272,61,53.87,0.33875,1]
["GO:0051606","detection of stimulus",59,10,7,0.46797,1,null,"GO:0050829","defense response to Gram-negative bacterium",15,3,2.78,0.54613,1,null,"GO:0015851","nucleobase transport",15,3,2.54,0.31032,1,null,"GO:0015919","peroxisomal membrane transport",18,9,3.56,0.33905,1]
["GO:0043094","cellular metabolic compound salvage",78,12,9.26,0.46801,1,null,"GO:0019253","reductive pentose-phosphate cycle",15,3,2.78,0.54613,1,null,"GO:2000060","positive regulation of ubiquitin-dependent protein catabolic process",23,4,3.9,0.31036,1,null,"GO:0046942","carboxylic acid transport",76,20,15.05,0.33913,1]
["GO:1902182","shoot apical meristem development",15,4,1.78,0.4681,1,null,"GO:0019217","regulation of fatty acid metabolic process",15,3,2.78,0.54613,1,null,"GO:0043903","regulation of biological process involved in symbiotic interaction",29,5,4.92,0.31036,1,null,"GO:0006119","oxidative phosphorylation",54,14,10.69,0.3394,1]
["GO:0098754","detoxification",115,13,13.65,0.46817,1,null,"GO:0010267","ta-siRNA processing",15,3,2.78,0.54613,1,null,"GO:0008202","steroid metabolic process",59,10,10,0.31037,1,null,"GO:0019747","regulation of isoprenoid metabolic process",29,9,5.74,0.33941,1]
["GO:0120251","hydrocarbon biosynthetic process",45,7,5.34,0.4682,1,null,"GO:2000024","regulation of leaf development",15,3,2.78,0.54613,1,null,"GO:0016101","diterpenoid metabolic process",37,6,6.27,0.31039,1,null,"GO:0019220","regulation of phosphate metabolic process",82,19,16.24,0.33949,1]
["GO:0015780","nucleotide-sugar transmembrane transport",21,4,2.49,0.46823,1,null,"GO:0045492","xylan biosynthetic process",15,3,2.78,0.54613,1,null,"GO:0000303","response to superoxide",14,2,2.37,0.3104,1,null,"GO:1901699","cellular response to nitrogen compound",39,10,7.72,0.33957,1]
["GO:0007088","regulation of mitotic nuclear division",16,3,1.9,0.4683,1,null,"GO:0010048","vernalization response",15,3,2.78,0.54613,1,null,"GO:0009668","plastid membrane organization",56,9,9.49,0.31041,1,null,"GO:0006650","glycerophospholipid metabolic process",121,26,23.96,0.33961,1]
["GO:0018958","phenol-containing compound metabolic process",52,7,6.17,0.46835,1,null,"GO:2000652","regulation of secondary cell wall biogenesis",15,3,2.78,0.54613,1,null,"GO:0051668","localization within membrane",125,16,21.19,0.31087,1,null,"GO:0009168","purine ribonucleoside monophosphate biosynthetic process",20,6,3.96,0.33961,1]
["GO:0110053","regulation of actin filament organization",22,3,2.61,0.46842,1,null,"GO:0007140","male meiotic nuclear division",15,3,2.78,0.54613,1,null,"GO:0015698","inorganic anion transport",71,20,12.04,0.31089,1,null,"GO:0046112","nucleobase biosynthetic process",18,5,3.56,0.33971,1]
["GO:0034655","nucleobase-containing compound catabolic process",158,14,18.76,0.46928,1,null,"GO:0015850","organic hydroxy compound transport",15,3,2.78,0.54613,1,null,"GO:0040029","epigenetic regulation of gene expression",147,24,24.92,0.31124,1,null,"GO:0046474","glycerophospholipid biosynthetic process",88,17,17.43,0.34002,1]
["GO:0009789","positive regulation of abscisic acid-activated signaling pathway",46,6,5.46,0.46933,1,null,"GO:0035194","RNA-mediated post-transcriptional gene silencing",41,7,7.61,0.54635,1,null,"GO:0051254","positive regulation of RNA metabolic process",424,103,71.87,0.31195,1,null,"GO:0006525","arginine metabolic process",19,3,3.76,0.34008,1]
["GO:0022607","cellular component assembly",822,88,97.58,0.46959,1,null,"GO:0045927","positive regulation of growth",31,4,5.75,0.54666,1,null,"GO:0000103","sulfate assimilation",22,5,3.73,0.31269,1,null,"GO:0000272","polysaccharide catabolic process",62,11,12.28,0.34017,1]
["GO:0042592","homeostatic process",411,34,48.79,0.47115,1,null,"GO:0098771","inorganic ion homeostasis",172,42,31.92,0.55415,1,null,"GO:1990110","callus formation",22,5,3.73,0.31269,1,null,"GO:0009066","aspartate family amino acid metabolic process",55,9,10.89,0.34027,1]
["GO:0006259","DNA metabolic process",556,97,66,0.47153,1,null,"GO:0031326","regulation of cellular biosynthetic process",1785,288,331.28,0.55575,1,null,"GO:0010928","regulation of auxin mediated signaling pathway",35,7,5.93,0.31275,1,null,"GO:1901576","organic substance biosynthetic process",4575,999,906.02,0.34227,1]
["GO:0009606","tropism",149,22,17.69,0.47452,1,null,"GO:0009637","response to blue light",133,25,24.68,0.55949,1,null,"GO:0010311","lateral root formation",49,10,8.31,0.31282,1,null,"GO:0048444","floral organ morphogenesis",31,9,6.14,0.34399,1]
["GO:0010154","fruit development",1152,182,136.75,0.47797,1,null,"GO:0006643","membrane lipid metabolic process",102,23,18.93,0.55956,1,null,"GO:1901576","organic substance biosynthetic process",5490,906,930.64,0.31389,1,null,"GO:0009735","response to cytokinin",77,25,15.25,0.344,1]
["GO:0000904","cell morphogenesis involved in differentiation",224,28,26.59,0.48377,1,null,"GO:0006555","methionine metabolic process",23,8,4.27,0.55961,1,null,"GO:0015718","monocarboxylic acid transport",27,6,4.58,0.32294,1,null,"GO:2000070","regulation of response to water deprivation",26,7,5.15,0.34425,1]
["GO:0051707","response to other organism",1988,183,235.99,0.48396,1,null,"GO:0017004","cytochrome complex assembly",14,5,2.6,0.55981,1,null,"GO:0006415","translational termination",17,4,2.88,0.32302,1,null,"GO:0052546","cell wall pectin metabolic process",28,7,5.55,0.34435,1]
["GO:0009645","response to low light intensity stimulus",30,4,3.56,0.48416,1,null,"GO:0043087","regulation of GTPase activity",35,8,6.5,0.55994,1,null,"GO:0006807","nitrogen compound metabolic process",9029,1441,1530.55,0.32466,1,null,"GO:0045828","positive regulation of isoprenoid metabolic process",15,4,2.97,0.34446,1]
["GO:0006606","protein import into nucleus",47,6,5.58,0.49093,1,null,"GO:1902532","negative regulation of intracellular signal transduction",19,5,3.53,0.55994,1,null,"GO:0046394","carboxylic acid biosynthetic process",565,102,95.78,0.32568,1,null,"GO:0009071","serine family amino acid catabolic process",15,4,2.97,0.34446,1]
["GO:0090351","seedling development",197,29,23.39,0.4924,1,null,"GO:1990069","stomatal opening",15,4,2.78,0.55998,1,null,"GO:0006725","cellular aromatic compound metabolic process",5925,881,1004.38,0.32845,1,null,"GO:0006541","glutamine metabolic process",15,4,2.97,0.34446,1]
["GO:0008285","negative regulation of cell population proliferation",22,3,2.61,0.49422,1,null,"GO:0071369","cellular response to ethylene stimulus",66,13,12.25,0.56005,1,null,"GO:0048585","negative regulation of response to stimulus",221,50,37.46,0.33027,1,null,"GO:0006353","DNA-templated transcription termination",15,4,2.97,0.34446,1]
["GO:0010030","positive regulation of seed germination",22,3,2.61,0.49422,1,null,"GO:0000394","RNA splicing, via endonucleolytic cleavage and ligation",14,3,2.6,0.5601,1,null,"GO:0031331","positive regulation of cellular catabolic process",88,17,14.92,0.33246,1,null,"GO:0010105","negative regulation of ethylene-activated signaling pathway",15,4,2.97,0.34446,1]
["GO:0031400","negative regulation of protein modification process",22,3,2.61,0.49422,1,null,"GO:0031099","regeneration",14,3,2.6,0.5601,1,null,"GO:1901001","negative regulation of response to salt stress",12,3,2.03,0.3327,1,null,"GO:2000024","regulation of leaf development",15,4,2.97,0.34446,1]
["GO:0010555","response to mannitol",22,3,2.61,0.49422,1,null,"GO:0046417","chorismate metabolic process",14,3,2.6,0.5601,1,null,"GO:0090158","endoplasmic reticulum membrane organization",12,3,2.03,0.3327,1,null,"GO:0010584","pollen exine formation",15,4,2.97,0.34446,1]
["GO:0007163","establishment or maintenance of cell polarity",22,3,2.61,0.49422,1,null,"GO:0047484","regulation of response to osmotic stress",36,7,6.68,0.56011,1,null,"GO:0009684","indoleacetic acid biosynthetic process",12,3,2.03,0.3327,1,null,"GO:0008361","regulation of cell size",15,4,2.97,0.34446,1]
["GO:0010162","seed dormancy process",53,7,6.29,0.49969,1,null,"GO:0045834","positive regulation of lipid metabolic process",26,5,4.83,0.56013,1,null,"GO:0018107","peptidyl-threonine phosphorylation",12,3,2.03,0.3327,1,null,"GO:0007140","male meiotic nuclear division",15,4,2.97,0.34446,1]
["GO:0022622","root system development",978,145,116.1,0.49972,1,null,"GO:0046519","sphingoid metabolic process",16,3,2.97,0.56015,1,null,"GO:0033962","P-body assembly",12,3,2.03,0.3327,1,null,"GO:0010183","pollen tube guidance",29,7,5.74,0.34696,1]
["GO:0008380","RNA splicing",294,24,34.9,0.50502,1,null,"GO:0009900","dehiscence",14,2,2.6,0.56024,1,null,"GO:0019375","galactolipid biosynthetic process",12,3,2.03,0.3327,1,null,"GO:0009561","megagametogenesis",54,11,10.69,0.34729,1]
["GO:0048467","gynoecium development",75,12,8.9,0.50734,1,null,"GO:0090354","regulation of auxin metabolic process",15,2,2.78,0.56027,1,null,"GO:0006949","syncytium formation",12,3,2.03,0.3327,1,null,"GO:0015995","chlorophyll biosynthetic process",76,19,15.05,0.35205,1]
["GO:0033043","regulation of organelle organization",144,20,17.09,0.50739,1,null,"GO:0030048","actin filament-based movement",16,2,2.97,0.5603,1,null,"GO:0014074","response to purine-containing compound",12,3,2.03,0.3327,1,null,"GO:0051253","negative regulation of RNA metabolic process",158,47,31.29,0.35521,1]
["GO:0046890","regulation of lipid biosynthetic process",62,10,7.36,0.50746,1,null,"GO:0099515","actin filament-based transport",16,2,2.97,0.5603,1,null,"GO:0000304","response to singlet oxygen",12,3,2.03,0.3327,1,null,"GO:0045934","negative regulation of nucleobase-containing compound metabolic process",188,52,37.23,0.35531,1]
["GO:0065008","regulation of biological quality",480,59,56.98,0.50764,1,null,"GO:0140053","mitochondrial gene expression",65,11,12.06,0.56031,1,null,"GO:2000142","regulation of DNA-templated transcription initiation",12,3,2.03,0.3327,1,null,"GO:0090696","post-embryonic plant organ development",131,40,25.94,0.35539,1]
["GO:0006820","monoatomic anion transport",28,5,3.32,0.50773,1,null,"GO:0007091","metaphase/anaphase transition of mitotic cell cycle",17,2,3.16,0.56033,1,null,"GO:0009933","meristem structural organization",87,20,14.75,0.3335,1,null,"GO:1903507","negative regulation of nucleic acid-templated transcription",145,42,28.72,0.35548,1]
["GO:0031507","heterochromatin formation",37,6,4.39,0.50775,1,null,"GO:0006661","phosphatidylinositol biosynthetic process",47,7,8.72,0.56041,1,null,"GO:0046889","positive regulation of lipid biosynthetic process",28,6,4.75,0.33474,1,null,"GO:0009144","purine nucleoside triphosphate metabolic process",83,28,16.44,0.35567,1]
["GO:0006306","DNA methylation",46,7,5.46,0.50777,1,null,"GO:0050777","negative regulation of immune response",25,2,4.64,0.56054,1,null,"GO:0008104","protein localization",657,105,111.37,0.33576,1,null,"GO:0009791","post-embryonic development",2024,480,400.83,0.3557,1]
["GO:0009938","negative regulation of gibberellic acid mediated signaling pathway",14,2,1.66,0.5081,1,null,"GO:0043487","regulation of RNA stability",63,9,11.69,0.56055,1,null,"GO:0006767","water-soluble vitamin metabolic process",64,15,10.85,0.33767,1,null,"GO:0009914","hormone transport",95,30,18.81,0.35571,1]
["GO:0016024","CDP-diacylglycerol biosynthetic process",14,2,1.66,0.5081,1,null,"GO:0070828","heterochromatin organization",35,3,6.5,0.56067,1,null,"GO:0009581","detection of external stimulus",28,8,4.75,0.33782,1,null,"GO:0071368","cellular response to cytokinin stimulus",48,18,9.51,0.35601,1]
["GO:0031540","regulation of anthocyanin biosynthetic process",14,2,1.66,0.5081,1,null,"GO:0009156","ribonucleoside monophosphate biosynthetic process",35,3,6.5,0.56067,1,null,"GO:0009582","detection of abiotic stimulus",28,8,4.75,0.33782,1,null,"GO:0015931","nucleobase-containing compound transport",93,25,18.42,0.35621,1]
["GO:2000033","regulation of seed dormancy process",14,2,1.66,0.5081,1,null,"GO:0048284","organelle fusion",70,9,12.99,0.56074,1,null,"GO:0006534","cysteine metabolic process",25,7,4.24,0.3379,1,null,"GO:0070588","calcium ion transmembrane transport",34,8,6.73,0.35628,1]
["GO:0005977","glycogen metabolic process",14,2,1.66,0.5081,1,null,"GO:0030029","actin filament-based process",88,11,16.33,0.56094,1,null,"GO:0015748","organophosphate ester transport",43,10,7.29,0.33791,1,null,"GO:0071489","cellular response to red or far red light",49,15,9.7,0.35636,1]
["GO:0032506","cytokinetic process",14,2,1.66,0.5081,1,null,"GO:0000280","nuclear division",136,9,25.24,0.56255,1,null,"GO:0006558","L-phenylalanine metabolic process",18,5,3.05,0.33803,1,null,"GO:0000469","cleavage involved in rRNA processing",25,9,4.95,0.35649,1]
["GO:0046620","regulation of organ growth",14,2,1.66,0.5081,1,null,"GO:0019438","aromatic compound biosynthetic process",2308,381,428.34,0.566,1,null,"GO:0009900","dehiscence",23,5,3.9,0.33817,1,null,"GO:0009637","response to blue light",133,29,26.34,0.35654,1]
["GO:0051781","positive regulation of cell division",14,2,1.66,0.5081,1,null,"GO:0009739","response to gibberellin",86,14,15.96,0.57525,1,null,"GO:0009067","aspartate family amino acid biosynthetic process",44,8,7.46,0.33826,1,null,"GO:0001678","intracellular glucose homeostasis",18,7,3.56,0.35656,1]
["GO:0010588","cotyledon vascular tissue pattern formation",14,2,1.66,0.5081,1,null,"GO:0048584","positive regulation of response to stimulus",205,35,38.05,0.57572,1,null,"GO:0072525","pyridine-containing compound biosynthetic process",21,4,3.56,0.33828,1,null,"GO:0010921","regulation of phosphatase activity",26,8,5.15,0.35662,1]
["GO:0015770","sucrose transport",14,2,1.66,0.5081,1,null,"GO:0048588","developmental cell growth",190,43,35.26,0.57716,1,null,"GO:0045787","positive regulation of cell cycle",33,6,5.59,0.33828,1,null,"GO:0001763","morphogenesis of a branching structure",17,6,3.37,0.35665,1]
["GO:0010540","basipetal auxin transport",14,2,1.66,0.5081,1,null,"GO:1901564","organonitrogen compound metabolic process",4414,735,819.19,0.57747,1,null,"GO:0006605","protein targeting",222,36,37.63,0.33862,1,null,"GO:0005991","trehalose metabolic process",13,5,2.57,0.35667,1]
["GO:0046164","alcohol catabolic process",14,2,1.66,0.5081,1,null,"GO:0044260","cellular macromolecule metabolic process",1996,266,370.43,0.57755,1,null,"GO:0050793","regulation of developmental process",1266,239,214.61,0.3414,1,null,"GO:0045937","positive regulation of phosphate metabolic process",13,5,2.57,0.35667,1]
["GO:1990542","mitochondrial transmembrane transport",56,9,6.65,0.50995,1,null,"GO:1901659","glycosyl compound biosynthetic process",60,16,11.14,0.57816,1,null,"GO:0010038","response to metal ion",187,42,31.7,0.34622,1,null,"GO:0019682","glyceraldehyde-3-phosphate metabolic process",13,5,2.57,0.35667,1]
["GO:0006720","isoprenoid metabolic process",244,22,28.96,0.51014,1,null,"GO:0043484","regulation of RNA splicing",35,8,6.5,0.5789,1,null,"GO:0040008","regulation of growth",289,59,48.99,0.34629,1,null,"GO:2000069","regulation of post-embryonic root development",14,5,2.77,0.35669,1]
["GO:0048767","root hair elongation",72,9,8.55,0.51215,1,null,"GO:0009903","chloroplast avoidance movement",10,2,1.86,0.5792,1,null,"GO:0008219","cell death",205,49,34.75,0.34701,1,null,"GO:0048017","inositol lipid-mediated signaling",14,5,2.77,0.35669,1]
["GO:0009733","response to auxin",321,39,38.1,0.51517,1,null,"GO:0010405","arabinogalactan protein metabolic process",10,2,1.86,0.5792,1,null,"GO:0051260","protein homooligomerization",23,5,3.9,0.34887,1,null,"GO:0009895","negative regulation of catabolic process",21,6,4.16,0.35673,1]
["GO:0065003","protein-containing complex assembly",518,65,61.49,0.52135,1,null,"GO:0006545","glycine biosynthetic process",10,2,1.86,0.5792,1,null,"GO:0009813","flavonoid biosynthetic process",98,19,16.61,0.35114,1,null,"GO:0006576","biogenic amine metabolic process",58,13,11.49,0.35677,1]
["GO:0033036","macromolecule localization",933,97,110.75,0.52203,1,null,"GO:0007041","lysosomal transport",10,2,1.86,0.5792,1,null,"GO:0022618","ribonucleoprotein complex assembly",119,13,20.17,0.35125,1,null,"GO:0140029","exocytic process",13,4,2.57,0.35678,1]
["GO:0010043","response to zinc ion",40,5,4.75,0.52314,1,null,"GO:0006388","tRNA splicing, via endonucleolytic cleavage and ligation",10,2,1.86,0.5792,1,null,"GO:0042343","indole glucosinolate metabolic process",34,7,5.76,0.35154,1,null,"GO:0018022","peptidyl-lysine methylation",50,11,9.9,0.35681,1]
["GO:1905039","carboxylic acid transmembrane transport",66,10,7.83,0.52444,1,null,"GO:0006655","phosphatidylglycerol biosynthetic process",10,2,1.86,0.5792,1,null,"GO:0030307","positive regulation of cell growth",18,4,3.05,0.36472,1,null,"GO:0051049","regulation of transport",86,18,17.03,0.35683,1]
["GO:0048582","positive regulation of post-embryonic development",77,10,9.14,0.5249,1,null,"GO:0033157","regulation of intracellular protein transport",10,2,1.86,0.5792,1,null,"GO:0010039","response to iron ion",18,4,3.05,0.36472,1,null,"GO:0015851","nucleobase transport",14,3,2.77,0.35691,1]
["GO:0034968","histone lysine methylation",43,5,5.1,0.52523,1,null,"GO:0006646","phosphatidylethanolamine biosynthetic process",10,2,1.86,0.5792,1,null,"GO:2001006","regulation of cellulose biosynthetic process",18,4,3.05,0.36472,1,null,"GO:0008037","cell recognition",35,7,6.93,0.35693,1]
["GO:0005985","sucrose metabolic process",36,4,4.27,0.52529,1,null,"GO:0010262","somatic embryogenesis",10,2,1.86,0.5792,1,null,"GO:0000380","alternative mRNA splicing, via spliceosome",18,4,3.05,0.36472,1,null,"GO:1901568","fatty acid derivative metabolic process",30,6,5.94,0.35693,1]
["GO:0000725","recombinational repair",96,24,11.4,0.52924,1,null,"GO:0010215","cellulose microfibril organization",10,2,1.86,0.5792,1,null,"GO:2000904","regulation of starch metabolic process",18,4,3.05,0.36472,1,null,"GO:0019344","cysteine biosynthetic process",15,3,2.97,0.35693,1]
["GO:0006109","regulation of carbohydrate metabolic process",75,16,8.9,0.53027,1,null,"GO:0019762","glucosinolate catabolic process",10,2,1.86,0.5792,1,null,"GO:0007033","vacuole organization",72,14,12.21,0.36473,1,null,"GO:0016101","diterpenoid metabolic process",26,5,5.15,0.35695,1]
["GO:0044092","negative regulation of molecular function",39,9,4.63,0.53078,1,null,"GO:0030837","negative regulation of actin filament polymerization",10,2,1.86,0.5792,1,null,"GO:0010182","sugar mediated signaling pathway",39,10,6.61,0.36656,1,null,"GO:0052482","defense response by cell wall thickening",13,2,2.57,0.357,1]
["GO:0071897","DNA biosynthetic process",29,6,3.44,0.53112,1,null,"GO:0046512","sphingosine biosynthetic process",10,2,1.86,0.5792,1,null,"GO:0030244","cellulose biosynthetic process",58,10,9.83,0.3676,1,null,"GO:0019374","galactolipid metabolic process",14,2,2.77,0.35702,1]
["GO:0090502","RNA phosphodiester bond hydrolysis, endonucleolytic",18,4,2.14,0.53125,1,null,"GO:0009423","chorismate biosynthetic process",10,2,1.86,0.5792,1,null,"GO:0048367","shoot system development",1436,260,243.42,0.37893,1,null,"GO:0032434","regulation of proteasomal ubiquitin-dependent protein catabolic process",22,3,4.36,0.35708,1]
["GO:0044273","sulfur compound catabolic process",21,4,2.49,0.53132,1,null,"GO:0071577","zinc ion transmembrane transport",10,2,1.86,0.5792,1,null,"GO:2000026","regulation of multicellular organismal development",498,108,84.42,0.38006,1,null,"GO:0140013","meiotic nuclear division",83,15,16.44,0.35709,1]
["GO:0048359","mucilage metabolic process involved in seed coat development",22,4,2.61,0.53134,1,null,"GO:0034052","positive regulation of plant-type hypersensitive response",10,2,1.86,0.5792,1,null,"GO:0048527","lateral root development",112,23,18.99,0.38032,1,null,"GO:0030036","actin cytoskeleton organization",79,13,15.64,0.35722,1]
["GO:1902930","regulation of alcohol biosynthetic process",22,3,2.61,0.53152,1,null,"GO:1901002","positive regulation of response to salt stress",10,2,1.86,0.5792,1,null,"GO:0009875","pollen-pistil interaction",25,7,4.24,0.38245,1,null,"GO:0061982","meiosis I cell cycle process",56,7,11.09,0.35738,1]
["GO:1901570","fatty acid derivative biosynthetic process",40,5,4.75,0.53155,1,null,"GO:0009969","xyloglucan biosynthetic process",10,2,1.86,0.5792,1,null,"GO:1901679","nucleotide transmembrane transport",13,3,2.2,0.38289,1,null,"GO:0045292","mRNA cis splicing, via spliceosome",20,5,3.96,0.36177,1]
["GO:0043244","regulation of protein-containing complex disassembly",17,2,2.02,0.5316,1,null,"GO:0080112","seed growth",10,2,1.86,0.5792,1,null,"GO:0048575","short-day photoperiodism, flowering",13,3,2.2,0.38289,1,null,"GO:0031327","negative regulation of cellular biosynthetic process",270,72,53.47,0.367,1]
["GO:0034762","regulation of transmembrane transport",18,2,2.14,0.53162,1,null,"GO:0002252","immune effector process",10,2,1.86,0.5792,1,null,"GO:1901371","regulation of leaf morphogenesis",13,3,2.2,0.38289,1,null,"GO:0009890","negative regulation of biosynthetic process",283,75,56.04,0.37193,1]
["GO:0045132","meiotic chromosome segregation",57,6,6.77,0.53174,1,null,"GO:0060966","regulation of gene silencing by RNA",20,3,3.71,0.57938,1,null,"GO:0007265","Ras protein signal transduction",13,3,2.2,0.38289,1,null,"GO:0030244","cellulose biosynthetic process",52,13,10.3,0.37312,1]
["GO:0048871","multicellular organismal-level homeostasis",32,3,3.8,0.53174,1,null,"GO:0042147","retrograde transport, endosome to Golgi",27,5,5.01,0.57994,1,null,"GO:0035195","miRNA-mediated gene silencing",13,3,2.2,0.38289,1,null,"GO:0050821","protein stabilization",25,6,4.95,0.37367,1]
["GO:0006354","DNA-templated transcription elongation",47,3,5.58,0.53207,1,null,"GO:0061025","membrane fusion",53,4,9.84,0.58051,1,null,"GO:0043254","regulation of protein-containing complex assembly",32,5,5.42,0.38316,1,null,"GO:1900150","regulation of defense response to fungus",25,6,4.95,0.37367,1]
["GO:0006665","sphingolipid metabolic process",49,3,5.82,0.53212,1,null,"GO:0032879","regulation of localization",104,12,19.3,0.58084,1,null,"GO:0006406","mRNA export from nucleus",35,8,5.93,0.38491,1,null,"GO:0048024","regulation of mRNA splicing, via spliceosome",25,6,4.95,0.37367,1]
["GO:0046903","secretion",72,4,8.55,0.53244,1,null,"GO:0007017","microtubule-based process",165,18,30.62,0.58201,1,null,"GO:0010025","wax biosynthetic process",34,6,5.76,0.38546,1,null,"GO:0032870","cellular response to hormone stimulus",915,248,181.2,0.37484,1]
["GO:0070085","glycosylation",134,11,15.91,0.53251,1,null,"GO:0048509","regulation of meristem development",43,11,7.98,0.59188,1,null,"GO:0044281","small molecule metabolic process",2654,557,449.89,0.39586,1,null,"GO:0000460","maturation of 5.8S rRNA",31,9,6.14,0.37562,1]
["GO:0006643","membrane lipid metabolic process",104,4,12.35,0.53315,1,null,"GO:1901617","organic hydroxy compound biosynthetic process",155,29,28.77,0.59252,1,null,"GO:0009890","negative regulation of biosynthetic process",321,81,54.41,0.39944,1,null,"GO:0010087","phloem or xylem histogenesis",84,16,16.64,0.37591,1]
["GO:0006807","nitrogen compound metabolic process",9029,1152,1071.81,0.53322,1,null,"GO:0043650","dicarboxylic acid biosynthetic process",26,5,4.83,0.59265,1,null,"GO:0046907","intracellular transport",664,114,112.56,0.39979,1,null,"GO:0046653","tetrahydrofolate metabolic process",25,6,4.95,0.37603,1]
["GO:0009753","response to jasmonic acid",536,64,63.63,0.534,1,null,"GO:0044030","regulation of DNA methylation",16,3,2.97,0.59269,1,null,"GO:0009699","phenylpropanoid biosynthetic process",66,12,11.19,0.40001,1,null,"GO:0032107","regulation of response to nutrient levels",11,3,2.18,0.37608,1]
["GO:0019725","cellular homeostasis",230,13,27.3,0.53428,1,null,"GO:0071712","ER-associated misfolded protein catabolic process",16,3,2.97,0.59269,1,null,"GO:0009150","purine ribonucleotide metabolic process",179,37,30.34,0.40313,1,null,"GO:0009231","riboflavin biosynthetic process",11,3,2.18,0.37608,1]
["GO:0097659","nucleic acid-templated transcription",1970,218,233.85,0.53492,1,null,"GO:0048449","floral organ formation",16,3,2.97,0.59269,1,null,"GO:0043562","cellular response to nitrogen levels",36,12,6.1,0.40327,1,null,"GO:0051555","flavonol biosynthetic process",11,3,2.18,0.37608,1]
["GO:2001141","regulation of RNA biosynthetic process",1746,186,207.26,0.53598,1,null,"GO:0034762","regulation of transmembrane transport",16,3,2.97,0.59269,1,null,"GO:0005982","starch metabolic process",68,17,11.53,0.40335,1,null,"GO:0009938","negative regulation of gibberellic acid mediated signaling pathway",11,3,2.18,0.37608,1]
["GO:0009911","positive regulation of flower development",32,4,3.8,0.53674,1,null,"GO:0010214","seed coat development",37,6,6.87,0.59294,1,null,"GO:0034637","cellular carbohydrate biosynthetic process",205,40,34.75,0.40338,1,null,"GO:0006560","proline metabolic process",11,3,2.18,0.37608,1]
["GO:0051276","chromosome organization",203,31,24.1,0.54439,1,null,"GO:0050832","defense response to fungus",497,91,92.24,0.5948,1,null,"GO:0043647","inositol phosphate metabolic process",20,8,3.39,0.40351,1,null,"GO:0009065","glutamine family amino acid catabolic process",11,3,2.18,0.37608,1]
["GO:0016032","viral process",27,4,3.21,0.54612,1,null,"GO:0006974","cellular response to DNA damage stimulus",313,40,58.09,0.59974,1,null,"GO:0031329","regulation of cellular catabolic process",127,26,21.53,0.40353,1,null,"GO:1903426","regulation of reactive oxygen species biosynthetic process",11,3,2.18,0.37608,1]
["GO:0010389","regulation of G2/M transition of mitotic cell cycle",27,4,3.21,0.54612,1,null,"GO:0009873","ethylene-activated signaling pathway",62,12,11.51,0.60354,1,null,"GO:1901401","regulation of tetrapyrrole metabolic process",49,12,8.31,0.40367,1,null,"GO:0010158","abaxial cell fate specification",11,3,2.18,0.37608,1]
["GO:0006353","DNA-templated transcription termination",15,2,1.78,0.54628,1,null,"GO:0010311","lateral root formation",39,7,7.24,0.60385,1,null,"GO:0042176","regulation of protein catabolic process",43,9,7.29,0.40403,1,null,"GO:0018342","protein prenylation",11,3,2.18,0.37608,1]
["GO:0062014","negative regulation of small molecule metabolic process",15,2,1.78,0.54628,1,null,"GO:0042631","cellular response to water deprivation",22,4,4.08,0.60416,1,null,"GO:1901616","organic hydroxy compound catabolic process",22,5,3.73,0.40411,1,null,"GO:1901371","regulation of leaf morphogenesis",11,3,2.18,0.37608,1]
["GO:0050688","regulation of defense response to virus",15,2,1.78,0.54628,1,null,"GO:2000031","regulation of salicylic acid mediated signaling pathway",22,4,4.08,0.60416,1,null,"GO:0051094","positive regulation of developmental process",126,30,21.36,0.40415,1,null,"GO:0070370","cellular heat acclimation",11,3,2.18,0.37608,1]
["GO:0006108","malate metabolic process",15,2,1.78,0.54628,1,null,"GO:0046889","positive regulation of lipid biosynthetic process",22,4,4.08,0.60416,1,null,"GO:0032102","negative regulation of response to external stimulus",43,7,7.29,0.4044,1,null,"GO:0034389","lipid droplet organization",11,3,2.18,0.37608,1]
["GO:1900457","regulation of brassinosteroid mediated signaling pathway",15,2,1.78,0.54628,1,null,"GO:0009645","response to low light intensity stimulus",22,4,4.08,0.60416,1,null,"GO:0002832","negative regulation of response to biotic stimulus",43,7,7.29,0.4044,1,null,"GO:0016567","protein ubiquitination",11,3,2.18,0.37608,1]
["GO:0006002","fructose 6-phosphate metabolic process",15,2,1.78,0.54628,1,null,"GO:0051054","positive regulation of DNA metabolic process",22,4,4.08,0.60416,1,null,"GO:0010208","pollen wall assembly",25,3,4.24,0.40457,1,null,"GO:1902584","positive regulation of response to water deprivation",11,3,2.18,0.37608,1]
["GO:0031058","positive regulation of histone modification",15,2,1.78,0.54628,1,null,"GO:0016125","sterol metabolic process",41,7,7.61,0.60433,1,null,"GO:0000041","transition metal ion transport",61,9,10.34,0.40459,1,null,"GO:0051123","RNA polymerase II preinitiation complex assembly",11,3,2.18,0.37608,1]
["GO:0009860","pollen tube growth",102,12,12.11,0.54662,1,null,"GO:0009314","response to radiation",1703,333,316.06,0.60689,1,null,"GO:1900424","regulation of defense response to bacterium",46,6,7.8,0.40467,1,null,"GO:0000467","exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, L...",11,3,2.18,0.37608,1]
["GO:0005976","polysaccharide metabolic process",385,60,45.7,0.54984,1,null,"GO:0046700","heterocycle catabolic process",233,41,43.24,0.61509,1,null,"GO:0033692","cellular polysaccharide biosynthetic process",171,25,28.99,0.40507,1,null,"GO:0046620","regulation of organ growth",11,3,2.18,0.37608,1]
["GO:0006508","proteolysis",666,50,79.06,0.55028,1,null,"GO:0006807","nitrogen compound metabolic process",7947,1257,1474.87,0.61539,1,null,"GO:0006839","mitochondrial transport",59,4,10,0.40543,1,null,"GO:0006904","vesicle docking involved in exocytosis",11,3,2.18,0.37608,1]
["GO:0010017","red or far-red light signaling pathway",52,7,6.17,0.55468,1,null,"GO:0018130","heterocycle biosynthetic process",2227,358,413.31,0.6172,1,null,"GO:0006098","pentose-phosphate shunt",30,9,5.09,0.40544,1,null,"GO:0010586","miRNA metabolic process",11,3,2.18,0.37608,1]
["GO:0010020","chloroplast fission",24,3,2.85,0.55491,1,null,"GO:0010556","regulation of macromolecule biosynthetic process",1618,256,300.28,0.62096,1,null,"GO:0009827","plant-type cell wall modification",42,10,7.12,0.40572,1,null,"GO:0006086","acetyl-CoA biosynthetic process from pyruvate",11,3,2.18,0.37608,1]
["GO:0000387","spliceosomal snRNP assembly",24,3,2.85,0.55491,1,null,"GO:0070588","calcium ion transmembrane transport",34,6,6.31,0.62362,1,null,"GO:0001558","regulation of cell growth",91,17,15.43,0.40607,1,null,"GO:0051703","biological process involved in intraspecies interaction between organisms",11,3,2.18,0.37608,1]
["GO:0048768","root hair cell tip growth",24,3,2.85,0.55491,1,null,"GO:0010218","response to far red light",34,6,6.31,0.62362,1,null,"GO:0044089","positive regulation of cellular component biogenesis",19,4,3.22,0.40629,1,null,"GO:0045931","positive regulation of mitotic cell cycle",11,3,2.18,0.37608,1]
["GO:0009846","pollen germination",59,7,7,0.5606,1,null,"GO:0033013","tetrapyrrole metabolic process",249,55,46.21,0.63155,1,null,"GO:0019674","NAD metabolic process",19,4,3.22,0.40629,1,null,"GO:0015866","ADP transport",11,3,2.18,0.37608,1]
["GO:0007131","reciprocal meiotic recombination",57,7,6.77,0.56193,1,null,"GO:0048481","plant ovule development",40,7,7.42,0.63215,1,null,"GO:0006744","ubiquinone biosynthetic process",19,4,3.22,0.40629,1,null,"GO:0015867","ATP transport",11,3,2.18,0.37608,1]
["GO:0006081","cellular aldehyde metabolic process",51,5,6.05,0.56245,1,null,"GO:0048527","lateral root development",89,15,16.52,0.63261,1,null,"GO:0015749","monosaccharide transmembrane transport",19,4,3.22,0.40629,1,null,"GO:0010600","regulation of auxin biosynthetic process",11,3,2.18,0.37608,1]
["GO:0000079","regulation of cyclin-dependent protein serine/threonine kinase activity",42,5,4.99,0.56822,1,null,"GO:0010941","regulation of cell death",90,20,16.7,0.63277,1,null,"GO:0023052","signaling",1945,457,329.71,0.40698,1,null,"GO:0050794","regulation of cellular process",3940,944,780.27,0.37608,1]
["GO:0048765","root hair cell differentiation",123,15,14.6,0.58225,1,null,"GO:0010383","cell wall polysaccharide metabolic process",85,16,15.78,0.63345,1,null,"GO:0009555","pollen development",278,51,47.13,0.41444,1,null,"GO:0009696","salicylic acid metabolic process",32,7,6.34,0.37611,1]
["GO:0006541","glutamine metabolic process",16,2,1.9,0.58233,1,null,"GO:0032107","regulation of response to nutrient levels",11,2,2.04,0.6335,1,null,"GO:0032774","RNA biosynthetic process",1976,415,334.96,0.41636,1,null,"GO:0010948","negative regulation of cell cycle process",37,7,7.33,0.37634,1]
["GO:0010115","regulation of abscisic acid biosynthetic process",16,2,1.9,0.58233,1,null,"GO:0006596","polyamine biosynthetic process",11,2,2.04,0.6335,1,null,"GO:0051085","chaperone cofactor-dependent protein refolding",42,8,7.12,0.42041,1,null,"GO:0034614","cellular response to reactive oxygen species",30,7,5.94,0.38243,1]
["GO:0009968","negative regulation of signal transduction",101,12,11.99,0.58236,1,null,"GO:0009097","isoleucine biosynthetic process",11,2,2.04,0.6335,1,null,"GO:0009908","flower development",533,83,90.35,0.4212,1,null,"GO:0080135","regulation of cellular response to stress",76,14,15.05,0.3832,1]
["GO:0048609","multicellular organismal reproductive process",199,21,23.62,0.58311,1,null,"GO:0015695","organic cation transport",11,2,2.04,0.6335,1,null,"GO:0048523","negative regulation of cellular process",639,139,108.32,0.4218,1,null,"GO:1901361","organic cyclic compound catabolic process",278,62,55.05,0.38344,1]
["GO:0006383","transcription by RNA polymerase III",25,3,2.97,0.58358,1,null,"GO:0072530","purine-containing compound transmembrane transport",11,2,2.04,0.6335,1,null,"GO:1903507","negative regulation of nucleic acid-templated transcription",174,51,29.5,0.42467,1,null,"GO:0048580","regulation of post-embryonic development",352,108,69.71,0.38885,1]
["GO:0009269","response to desiccation",25,3,2.97,0.58358,1,null,"GO:0005992","trehalose biosynthetic process",11,2,2.04,0.6335,1,null,"GO:0010087","phloem or xylem histogenesis",119,17,20.17,0.42484,1,null,"GO:0016573","histone acetylation",35,8,6.93,0.3892,1]
["GO:0048831","regulation of shoot system development",172,14,20.42,0.58419,1,null,"GO:0016567","protein ubiquitination",11,2,2.04,0.6335,1,null,"GO:0009743","response to carbohydrate",182,49,30.85,0.42508,1,null,"GO:0009626","plant-type hypersensitive response",58,11,11.49,0.38981,1]
["GO:0065002","intracellular protein transmembrane transport",87,15,10.33,0.58454,1,null,"GO:0007584","response to nutrient",11,2,2.04,0.6335,1,null,"GO:0009765","photosynthesis, light harvesting",39,22,6.61,0.42543,1,null,"GO:0045333","cellular respiration",122,33,24.16,0.39182,1]
["GO:0031667","response to nutrient levels",233,24,27.66,0.58489,1,null,"GO:1902584","positive regulation of response to water deprivation",11,2,2.04,0.6335,1,null,"GO:1905156","negative regulation of photosynthesis",14,8,2.37,0.42661,1,null,"GO:2000242","negative regulation of reproductive process",61,15,12.08,0.39344,1]
["GO:0006811","monoatomic ion transport",270,23,32.05,0.58495,1,null,"GO:0000578","embryonic axis specification",11,2,2.04,0.6335,1,null,"GO:0044247","cellular polysaccharide catabolic process",20,7,3.39,0.42686,1,null,"GO:0090481","pyrimidine nucleotide-sugar transmembrane transport",16,4,3.17,0.39401,1]
["GO:0017148","negative regulation of translation",75,5,8.9,0.58496,1,null,"GO:0009616","RNAi-mediated antiviral immune response",11,2,2.04,0.6335,1,null,"GO:0009142","nucleoside triphosphate biosynthetic process",53,12,8.98,0.42693,1,null,"GO:0070507","regulation of microtubule cytoskeleton organization",16,4,3.17,0.39401,1]
["GO:0006525","arginine metabolic process",20,7,2.37,0.58632,1,null,"GO:0006271","DNA strand elongation involved in DNA replication",11,2,2.04,0.6335,1,null,"GO:0016116","carotenoid metabolic process",36,9,6.1,0.42694,1,null,"GO:0030042","actin filament depolymerization",16,4,3.17,0.39401,1]
["GO:0019722","calcium-mediated signaling",34,4,4.04,0.58647,1,null,"GO:0046352","disaccharide catabolic process",11,2,2.04,0.6335,1,null,"GO:0034243","regulation of transcription elongation by RNA polymerase II",20,6,3.39,0.42698,1,null,"GO:0006636","unsaturated fatty acid biosynthetic process",16,4,3.17,0.39401,1]
["GO:0010025","wax biosynthetic process",34,4,4.04,0.58647,1,null,"GO:0046620","regulation of organ growth",11,2,2.04,0.6335,1,null,"GO:0046839","phospholipid dephosphorylation",23,6,3.9,0.42704,1,null,"GO:0098659","inorganic cation import across plasma membrane",16,4,3.17,0.39401,1]
["GO:0051053","negative regulation of DNA metabolic process",34,7,4.04,0.58664,1,null,"GO:0006904","vesicle docking involved in exocytosis",11,2,2.04,0.6335,1,null,"GO:0006576","biogenic amine metabolic process",77,15,13.05,0.42706,1,null,"GO:0016122","xanthophyll metabolic process",16,4,3.17,0.39401,1]
["GO:0006534","cysteine metabolic process",25,5,2.97,0.58682,1,null,"GO:0051703","biological process involved in intraspecies interaction between organisms",11,2,2.04,0.6335,1,null,"GO:0019344","cysteine biosynthetic process",18,5,3.05,0.42706,1,null,"GO:0010337","regulation of salicylic acid metabolic process",16,4,3.17,0.39401,1]
["GO:0071369","cellular response to ethylene stimulus",73,10,8.67,0.58695,1,null,"GO:0016973","poly(A)+ mRNA export from nucleus",11,2,2.04,0.6335,1,null,"GO:1901568","fatty acid derivative metabolic process",43,9,7.29,0.42708,1,null,"GO:0045727","positive regulation of translation",16,4,3.17,0.39401,1]
["GO:0045787","positive regulation of cell cycle",33,5,3.92,0.587,1,null,"GO:0009725","response to hormone",1785,377,331.28,0.63399,1,null,"GO:0045089","positive regulation of innate immune response",57,11,9.66,0.42713,1,null,"GO:0009699","phenylpropanoid biosynthetic process",44,9,8.71,0.39416,1]
["GO:0045088","regulation of innate immune response",92,12,10.92,0.587,1,null,"GO:0010449","root meristem growth",37,4,6.87,0.63412,1,null,"GO:0034620","cellular response to unfolded protein",32,6,5.42,0.42722,1,null,"GO:0006396","RNA processing",815,196,161.4,0.40021,1]
["GO:0047484","regulation of response to osmotic stress",43,6,5.1,0.58703,1,null,"GO:0060918","auxin transport",93,12,17.26,0.63465,1,null,"GO:0010769","regulation of cell morphogenesis involved in differentiation",21,4,3.56,0.42724,1,null,"GO:0016311","dephosphorylation",182,48,36.04,0.40151,1]
["GO:0009581","detection of external stimulus",28,4,3.32,0.58707,1,null,"GO:0009890","negative regulation of biosynthetic process",283,45,52.52,0.63516,1,null,"GO:0009914","hormone transport",110,19,18.65,0.42725,1,null,"GO:0055085","transmembrane transport",576,130,114.07,0.40194,1]
["GO:0009582","detection of abiotic stimulus",28,4,3.32,0.58707,1,null,"GO:0010014","meristem initiation",33,7,6.12,0.63576,1,null,"GO:0015936","coenzyme A metabolic process",16,3,2.71,0.42726,1,null,"GO:0046890","regulation of lipid biosynthetic process",50,12,9.9,0.4046,1]
["GO:1900140","regulation of seedling development",96,12,11.4,0.58709,1,null,"GO:0032870","cellular response to hormone stimulus",915,159,169.81,0.63597,1,null,"GO:0034728","nucleosome organization",29,5,4.92,0.42728,1,null,"GO:0070417","cellular response to cold",21,5,4.16,0.405,1]
["GO:2000034","regulation of seed maturation",21,3,2.49,0.58711,1,null,"GO:0071395","cellular response to jasmonic acid stimulus",133,24,24.68,0.63618,1,null,"GO:0080050","regulation of seed development",24,4,4.07,0.4273,1,null,"GO:0032544","plastid translation",21,5,4.16,0.405,1]
["GO:0030071","regulation of mitotic metaphase/anaphase transition",17,2,2.02,0.58721,1,null,"GO:0048193","Golgi vesicle transport",165,18,30.62,0.63627,1,null,"GO:0006403","RNA localization",55,9,9.32,0.42733,1,null,"GO:0042744","hydrogen peroxide catabolic process",21,5,4.16,0.405,1]
["GO:0009900","dehiscence",23,2,2.73,0.58734,1,null,"GO:0009740","gibberellic acid mediated signaling pathway",36,4,6.68,0.63671,1,null,"GO:0042726","flavin-containing compound metabolic process",15,2,2.54,0.42736,1,null,"GO:0007163","establishment or maintenance of cell polarity",21,5,4.16,0.405,1]
["GO:0006119","oxidative phosphorylation",54,3,6.41,0.58785,1,null,"GO:0065002","intracellular protein transmembrane transport",90,25,16.7,0.63848,1,null,"GO:0006801","superoxide metabolic process",15,2,2.54,0.42736,1,null,"GO:0009846","pollen germination",55,12,10.89,0.40578,1]
["GO:0019318","hexose metabolic process",77,4,9.14,0.58819,1,null,"GO:0042538","hyperosmotic salinity response",46,8,8.54,0.64009,1,null,"GO:0010927","cellular component assembly involved in morphogenesis",28,4,4.75,0.42738,1,null,"GO:0006810","transport",1755,401,347.56,0.41399,1]
["GO:0071478","cellular response to radiation",178,15,21.13,0.58838,1,null,"GO:0006458","de novo' protein folding",46,17,8.54,0.64052,1,null,"GO:0070918","regulatory ncRNA processing",62,9,10.51,0.42747,1,null,"GO:0031668","cellular response to extracellular stimulus",158,39,31.29,0.41655,1]
["GO:0022900","electron transport chain",112,7,13.3,0.58841,1,null,"GO:0071496","cellular response to external stimulus",163,37,30.25,0.64077,1,null,"GO:0001763","morphogenesis of a branching structure",22,2,3.73,0.4275,1,null,"GO:0031329","regulation of cellular catabolic process",124,28,24.56,0.41736,1]
["GO:0009644","response to high light intensity",63,7,7.48,0.59371,1,null,"GO:0071478","cellular response to radiation",154,35,28.58,0.64082,1,null,"GO:0030036","actin cytoskeleton organization",93,9,15.76,0.42811,1,null,"GO:0071322","cellular response to carbohydrate stimulus",50,13,9.9,0.41743,1]
["GO:0070887","cellular response to chemical stimulus",1886,178,223.88,0.59694,1,null,"GO:0099402","plant organ development",1330,230,246.83,0.64094,1,null,"GO:0006812","monoatomic cation transport",225,51,38.14,0.42923,1,null,"GO:0090056","regulation of chlorophyll metabolic process",30,9,5.94,0.41744,1]
["GO:0006302","double-strand break repair",128,27,15.19,0.60684,1,null,"GO:0001558","regulation of cell growth",87,16,16.15,0.64112,1,null,"GO:0044249","cellular biosynthetic process",4867,832,825.03,0.43007,1,null,"GO:0006595","polyamine metabolic process",18,6,3.56,0.41755,1]
["GO:0006997","nucleus organization",52,13,6.17,0.60861,1,null,"GO:0006282","regulation of DNA repair",23,4,4.27,0.64115,1,null,"GO:1900055","regulation of leaf senescence",49,16,8.31,0.43048,1,null,"GO:0070192","chromosome organization involved in meiotic cell cycle",36,9,7.13,0.41766,1]
["GO:0019252","starch biosynthetic process",35,4,4.15,0.61013,1,null,"GO:0010380","regulation of chlorophyll biosynthetic process",23,4,4.27,0.64115,1,null,"GO:0010102","lateral root morphogenesis",63,13,10.68,0.43175,1,null,"GO:0072525","pyridine-containing compound biosynthetic process",21,5,4.16,0.41785,1]
["GO:0048825","cotyledon development",44,7,5.22,0.61038,1,null,"GO:0042592","homeostatic process",350,69,64.96,0.64117,1,null,"GO:1902531","regulation of intracellular signal transduction",43,9,7.29,0.4319,1,null,"GO:0006534","cysteine metabolic process",22,5,4.36,0.41789,1]
["GO:0044772","mitotic cell cycle phase transition",80,11,9.5,0.61047,1,null,"GO:0006625","protein targeting to peroxisome",17,5,3.16,0.64151,1,null,"GO:1901000","regulation of response to salt stress",36,7,6.1,0.43209,1,null,"GO:0048609","multicellular organismal reproductive process",170,34,33.67,0.41795,1]
["GO:0030433","ubiquitin-dependent ERAD pathway",44,5,5.22,0.61101,1,null,"GO:0043647","inositol phosphate metabolic process",17,5,3.16,0.64151,1,null,"GO:1901703","protein localization involved in auxin polar transport",14,3,2.37,0.43216,1,null,"GO:2000034","regulation of seed maturation",19,4,3.76,0.41796,1]
["GO:0009736","cytokinin-activated signaling pathway",61,7,7.24,0.61102,1,null,"GO:1902930","regulation of alcohol biosynthetic process",19,5,3.53,0.64157,1,null,"GO:0044804","autophagy of nucleus",14,3,2.37,0.43216,1,null,"GO:0050790","regulation of catalytic activity",141,21,27.92,0.41931,1]
["GO:0009812","flavonoid metabolic process",174,23,20.66,0.61142,1,null,"GO:0010496","intercellular transport",18,4,3.34,0.64169,1,null,"GO:0080186","developmental vegetative growth",14,3,2.37,0.43216,1,null,"GO:0099402","plant organ development",1330,337,263.39,0.42012,1]
["GO:0009411","response to UV",111,9,13.18,0.61177,1,null,"GO:0043170","macromolecule metabolic process",7591,1158,1408.8,0.64172,1,null,"GO:0055070","copper ion homeostasis",14,3,2.37,0.43216,1,null,"GO:0065008","regulation of biological quality",408,110,80.8,0.42081,1]
["GO:0042594","response to starvation",176,18,20.89,0.61202,1,null,"GO:0006544","glycine metabolic process",15,3,2.78,0.64176,1,null,"GO:0010332","response to gamma radiation",14,3,2.37,0.43216,1,null,"GO:0051302","regulation of cell division",54,12,10.69,0.42532,1]
["GO:0019684","photosynthesis, light reaction",164,13,19.47,0.61328,1,null,"GO:0045732","positive regulation of protein catabolic process",27,5,5.01,0.64179,1,null,"GO:0015770","sucrose transport",14,3,2.37,0.43216,1,null,"GO:0071470","cellular response to osmotic stress",42,13,8.32,0.43374,1]
["GO:0009084","glutamine family amino acid biosynthetic process",30,8,3.56,0.61497,1,null,"GO:0009247","glycolipid biosynthetic process",45,8,8.35,0.64184,1,null,"GO:0007032","endosome organization",14,3,2.37,0.43216,1,null,"GO:0010675","regulation of cellular carbohydrate metabolic process",47,13,9.31,0.43398,1]
["GO:0048444","floral organ morphogenesis",35,6,4.15,0.6157,1,null,"GO:0061136","regulation of proteasomal protein catabolic process",29,5,5.38,0.64185,1,null,"GO:0046164","alcohol catabolic process",14,3,2.37,0.43216,1,null,"GO:0042886","amide transport",25,8,4.95,0.43413,1]
["GO:0032968","positive regulation of transcription elongation by RNA polymerase II",17,2,2.02,0.61623,1,null,"GO:0018958","phenol-containing compound metabolic process",39,6,7.24,0.64197,1,null,"GO:0006820","monoatomic anion transport",28,5,4.75,0.43224,1,null,"GO:0000077","DNA damage checkpoint signaling",12,3,2.38,0.43472,1]
["GO:0009773","photosynthetic electron transport in photosystem I",17,2,2.02,0.61623,1,null,"GO:0009185","ribonucleoside diphosphate metabolic process",45,7,8.35,0.64199,1,null,"GO:0090068","positive regulation of cell cycle process",24,4,4.07,0.43232,1,null,"GO:1905156","negative regulation of photosynthesis",12,3,2.38,0.43472,1]
["GO:1900057","positive regulation of leaf senescence",17,2,2.02,0.61623,1,null,"GO:0051204","protein insertion into mitochondrial membrane",19,2,3.53,0.64202,1,null,"GO:0098869","cellular oxidant detoxification",26,4,4.41,0.4324,1,null,"GO:0072348","sulfur compound transport",12,3,2.38,0.43472,1]
["GO:0080036","regulation of cytokinin-activated signaling pathway",17,2,2.02,0.61623,1,null,"GO:0009225","nucleotide-sugar metabolic process",42,6,7.79,0.64206,1,null,"GO:0016226","iron-sulfur cluster assembly",31,6,5.25,0.43254,1,null,"GO:0110156","methylguanosine-cap decapping",12,3,2.38,0.43472,1]
["GO:0009690","cytokinin metabolic process",17,2,2.02,0.61623,1,null,"GO:0045859","regulation of protein kinase activity",27,2,5.01,0.64224,1,null,"GO:0007267","cell-cell signaling",30,4,5.09,0.43256,1,null,"GO:0005986","sucrose biosynthetic process",12,3,2.38,0.43472,1]
["GO:0010584","pollen exine formation",17,2,2.02,0.61623,1,null,"GO:1901570","fatty acid derivative biosynthetic process",28,2,5.2,0.64227,1,null,"GO:0022622","root system development",978,139,165.79,0.43902,1,null,"GO:0045332","phospholipid translocation",12,3,2.38,0.43472,1]
["GO:0045910","negative regulation of DNA recombination",17,2,2.02,0.61623,1,null,"GO:0032784","regulation of DNA-templated transcription elongation",33,2,6.12,0.6424,1,null,"GO:1902075","cellular response to salt",51,18,8.65,0.44482,1,null,"GO:0016559","peroxisome fission",12,3,2.38,0.43472,1]
["GO:0031123","RNA 3'-end processing",76,7,9.02,0.61679,1,null,"GO:0071826","ribonucleoprotein complex subunit organization",125,16,23.2,0.64287,1,null,"GO:0010014","meristem initiation",38,12,6.44,0.44589,1,null,"GO:0033962","P-body assembly",12,3,2.38,0.43472,1]
["GO:0016051","carbohydrate biosynthetic process",342,37,40.6,0.61726,1,null,"GO:0046390","ribose phosphate biosynthetic process",117,12,21.71,0.64324,1,null,"GO:0045292","mRNA cis splicing, via spliceosome",20,4,3.39,0.44728,1,null,"GO:0062014","negative regulation of small molecule metabolic process",12,3,2.38,0.43472,1]
["GO:0071215","cellular response to abscisic acid stimulus",291,26,34.54,0.61938,1,null,"GO:0016050","vesicle organization",99,8,18.37,0.64334,1,null,"GO:0003333","amino acid transmembrane transport",43,8,7.29,0.44807,1,null,"GO:0019856","pyrimidine nucleobase biosynthetic process",12,3,2.38,0.43472,1]
["GO:0007389","pattern specification process",289,53,34.31,0.62516,1,null,"GO:0090407","organophosphate biosynthetic process",298,43,55.31,0.64495,1,null,"GO:0071214","cellular response to abiotic stimulus",255,99,43.23,0.45599,1,null,"GO:1900457","regulation of brassinosteroid mediated signaling pathway",12,3,2.38,0.43472,1]
["GO:0006396","RNA processing",819,120,97.22,0.62884,1,null,"GO:0016072","rRNA metabolic process",244,15,45.28,0.64635,1,null,"GO:0009695","jasmonic acid biosynthetic process",26,5,4.41,0.45735,1,null,"GO:0045995","regulation of embryonic development",12,3,2.38,0.43472,1]
["GO:0009853","photorespiration",45,5,5.34,0.63145,1,null,"GO:0044255","cellular lipid metabolic process",793,160,147.17,0.64671,1,null,"GO:0051592","response to calcium ion",26,5,4.41,0.45735,1,null,"GO:0051053","negative regulation of DNA metabolic process",29,4,5.74,0.43528,1]
["GO:0009735","response to cytokinin",101,12,11.99,0.63283,1,null,"GO:0009735","response to cytokinin",77,13,14.29,0.64738,1,null,"GO:0048868","pollen tube development",154,33,26.11,0.46254,1,null,"GO:0006720","isoprenoid metabolic process",190,34,37.63,0.43575,1]
["GO:0042255","ribosome assembly",58,22,6.89,0.63329,1,null,"GO:0048519","negative regulation of biological process",1210,184,224.56,0.64832,1,null,"GO:0044262","cellular carbohydrate metabolic process",351,75,59.5,0.46392,1,null,"GO:0009056","catabolic process",1719,403,340.43,0.44046,1]
["GO:0006839","mitochondrial transport",59,14,7,0.63486,1,null,"GO:0016043","cellular component organization",2183,366,405.14,0.64858,1,null,"GO:0009926","auxin polar transport",88,16,14.92,0.46461,1,null,"GO:1905039","carboxylic acid transmembrane transport",45,12,8.91,0.44222,1]
["GO:0051205","protein insertion into membrane",27,7,3.21,0.63548,1,null,"GO:0010629","negative regulation of gene expression",280,35,51.96,0.65287,1,null,"GO:1900150","regulation of defense response to fungus",32,6,5.42,0.46479,1,null,"GO:0010014","meristem initiation",33,9,6.54,0.4424,1]
["GO:0006575","cellular modified amino acid metabolic process",51,9,6.05,0.63564,1,null,"GO:0006357","regulation of transcription by RNA polymerase II",272,46,50.48,0.65401,1,null,"GO:0009911","positive regulation of flower development",32,6,5.42,0.46479,1,null,"GO:0046856","phosphatidylinositol dephosphorylation",17,4,3.37,0.44292,1]
["GO:0006783","heme biosynthetic process",21,5,2.49,0.63572,1,null,"GO:0031347","regulation of defense response",556,97,103.19,0.65751,1,null,"GO:0031326","regulation of cellular biosynthetic process",2163,451,366.66,0.46489,1,null,"GO:0009395","phospholipid catabolic process",17,4,3.37,0.44292,1]
["GO:0006865","amino acid transport",51,8,6.05,0.63583,1,null,"GO:0010228","vegetative to reproductive phase transition of meristem",411,65,76.28,0.66689,1,null,"GO:0010104","regulation of ethylene-activated signaling pathway",25,6,4.24,0.46663,1,null,"GO:0009649","entrainment of circadian clock",17,4,3.37,0.44292,1]
["GO:0032102","negative regulation of response to external stimulus",43,7,5.1,0.63584,1,null,"GO:0016036","cellular response to phosphate starvation",53,9,9.84,0.67105,1,null,"GO:0003006","developmental process involved in reproduction",2101,357,356.15,0.4668,1,null,"GO:0018230","peptidyl-L-cysteine S-palmitoylation",17,4,3.37,0.44292,1]
["GO:0002832","negative regulation of response to biotic stimulus",43,7,5.1,0.63584,1,null,"GO:0006378","mRNA polyadenylation",24,4,4.45,0.6758,1,null,"GO:0009808","lignin metabolic process",45,8,7.63,0.4669,1,null,"GO:0031060","regulation of histone methylation",17,4,3.37,0.44292,1]
["GO:0000041","transition metal ion transport",61,8,7.24,0.63606,1,null,"GO:0080111","DNA demethylation",24,4,4.45,0.6758,1,null,"GO:0043666","regulation of phosphoprotein phosphatase activity",22,4,3.73,0.46692,1,null,"GO:0051592","response to calcium ion",17,4,3.37,0.44292,1]
["GO:0009150","purine ribonucleotide metabolic process",179,22,21.25,0.63606,1,null,"GO:0006406","mRNA export from nucleus",35,6,6.5,0.67581,1,null,"GO:0006551","leucine metabolic process",21,3,3.56,0.46708,1,null,"GO:1902075","cellular response to salt",39,8,7.72,0.44302,1]
["GO:0010054","trichoblast differentiation",131,16,15.55,0.63612,1,null,"GO:0055062","phosphate ion homeostasis",18,3,3.34,0.67603,1,null,"GO:0006573","valine metabolic process",21,3,3.56,0.46708,1,null,"GO:0006352","DNA-templated transcription initiation",72,18,14.26,0.44682,1]
["GO:0006637","acyl-CoA metabolic process",43,5,5.1,0.63623,1,null,"GO:0009556","microsporogenesis",18,3,3.34,0.67603,1,null,"GO:0016102","diterpenoid biosynthetic process",31,4,5.25,0.46722,1,null,"GO:0010075","regulation of meristem growth",48,13,9.51,0.44691,1]
["GO:0042176","regulation of protein catabolic process",43,4,5.1,0.63642,1,null,"GO:0000380","alternative mRNA splicing, via spliceosome",18,3,3.34,0.67603,1,null,"GO:0010608","post-transcriptional regulation of gene expression",191,31,32.38,0.46724,1,null,"GO:0006367","transcription initiation at RNA polymerase II promoter",33,8,6.54,0.44756,1]
["GO:0044282","small molecule catabolic process",203,26,24.1,0.63651,1,null,"GO:0051050","positive regulation of transport",18,3,3.34,0.67603,1,null,"GO:0051130","positive regulation of cellular component organization",44,5,7.46,0.46745,1,null,"GO:0046889","positive regulation of lipid biosynthetic process",22,5,4.36,0.44782,1]
["GO:0009100","glycoprotein metabolic process",140,12,16.62,0.6371,1,null,"GO:0007029","endoplasmic reticulum organization",29,4,5.38,0.67631,1,null,"GO:0006289","nucleotide-excision repair",44,8,7.46,0.47551,1,null,"GO:0010017","red or far-red light signaling pathway",45,13,8.91,0.44985,1]
["GO:0062013","positive regulation of small molecule metabolic process",27,3,3.21,0.63724,1,null,"GO:0080135","regulation of cellular response to stress",76,11,14.1,0.67882,1,null,"GO:0009736","cytokinin-activated signaling pathway",61,10,10.34,0.47587,1,null,"GO:0090627","plant epidermal cell differentiation",141,29,27.92,0.45092,1]
["GO:0016117","carotenoid biosynthetic process",27,3,3.21,0.63724,1,null,"GO:0016042","lipid catabolic process",105,31,19.49,0.67964,1,null,"GO:0006816","calcium ion transport",59,16,10,0.47853,1,null,"GO:0046700","heterocycle catabolic process",233,53,46.14,0.45093,1]
["GO:0009960","endosperm development",27,3,3.21,0.63724,1,null,"GO:0016114","terpenoid biosynthetic process",105,23,19.49,0.67971,1,null,"GO:0030148","sphingolipid biosynthetic process",36,10,6.1,0.47905,1,null,"GO:0003002","regionalization",158,38,31.29,0.45363,1]
["GO:0048367","shoot system development",1436,153,170.46,0.64063,1,null,"GO:0006720","isoprenoid metabolic process",190,39,35.26,0.6813,1,null,"GO:0006563","L-serine metabolic process",30,7,5.09,0.47953,1,null,"GO:0051510","regulation of unidimensional cell growth",54,10,10.69,0.45389,1]
["GO:0080134","regulation of response to stress",797,59,94.61,0.64332,1,null,"GO:0046165","alcohol biosynthetic process",67,16,12.43,0.68134,1,null,"GO:0006002","fructose 6-phosphate metabolic process",15,3,2.54,0.47989,1,null,"GO:0043622","cortical microtubule organization",37,8,7.33,0.45504,1]
["GO:2001006","regulation of cellulose biosynthetic process",18,2,2.14,0.64796,1,null,"GO:0006626","protein targeting to mitochondrion",51,10,9.47,0.68199,1,null,"GO:0048235","pollen sperm cell differentiation",15,3,2.54,0.47989,1,null,"GO:0006874","intracellular calcium ion homeostasis",37,8,7.33,0.45504,1]
["GO:0090421","embryonic meristem initiation",18,2,2.14,0.64796,1,null,"GO:0010411","xyloglucan metabolic process",22,4,4.08,0.68212,1,null,"GO:0031058","positive regulation of histone modification",15,3,2.54,0.47989,1,null,"GO:0009749","response to glucose",58,15,11.49,0.45506,1]
["GO:1900056","negative regulation of leaf senescence",18,2,2.14,0.64796,1,null,"GO:0002238","response to molecule of fungal origin",12,2,2.23,0.68216,1,null,"GO:0006521","regulation of cellular amino acid metabolic process",15,3,2.54,0.47989,1,null,"GO:0040007","growth",1115,228,220.81,0.4551,1]
["GO:0080092","regulation of pollen tube growth",18,2,2.14,0.64796,1,null,"GO:0006521","regulation of cellular amino acid metabolic process",12,2,2.23,0.68216,1,null,"GO:0009862","systemic acquired resistance, salicylic acid mediated signaling pathway",15,3,2.54,0.47989,1,null,"GO:0044272","sulfur compound biosynthetic process",172,35,34.06,0.45852,1]
["GO:0009395","phospholipid catabolic process",18,2,2.14,0.64796,1,null,"GO:1901679","nucleotide transmembrane transport",12,2,2.23,0.68216,1,null,"GO:1900425","negative regulation of defense response to bacterium",15,3,2.54,0.47989,1,null,"GO:0006082","organic acid metabolic process",1487,329,294.48,0.4587,1]
["GO:0048574","long-day photoperiodism, flowering",44,3,5.22,0.64855,1,null,"GO:0006301","postreplication repair",12,2,2.23,0.68216,1,null,"GO:0052544","defense response by callose deposition in cell wall",15,3,2.54,0.47989,1,null,"GO:0034654","nucleobase-containing compound biosynthetic process",1881,477,372.51,0.46827,1]
["GO:0034605","cellular response to heat",75,8,8.9,0.6492,1,null,"GO:2000762","regulation of phenylpropanoid metabolic process",12,2,2.23,0.68216,1,null,"GO:0030026","intracellular manganese ion homeostasis",15,3,2.54,0.47989,1,null,"GO:0070727","cellular macromolecule localization",694,167,137.44,0.47626,1]
["GO:0046889","positive regulation of lipid biosynthetic process",28,3,3.32,0.66219,1,null,"GO:2000033","regulation of seed dormancy process",12,2,2.23,0.68216,1,null,"GO:0015706","nitrate transmembrane transport",15,3,2.54,0.47989,1,null,"GO:0003006","developmental process involved in reproduction",1908,434,377.86,0.47812,1]
["GO:0030488","tRNA methylation",28,3,3.32,0.66219,1,null,"GO:0048658","anther wall tapetum development",12,2,2.23,0.68216,1,null,"GO:0006857","oligopeptide transport",15,3,2.54,0.47989,1,null,"GO:0009653","anatomical structure morphogenesis",1049,240,207.74,0.47976,1]
["GO:0044550","secondary metabolite biosynthetic process",250,51,29.68,0.66546,1,null,"GO:0010044","response to aluminum ion",12,2,2.23,0.68216,1,null,"GO:0010152","pollen maturation",15,3,2.54,0.47989,1,null,"GO:0019219","regulation of nucleobase-containing compound metabolic process",1938,494,383.8,0.48087,1]
["GO:1901698","response to nitrogen compound",215,21,25.52,0.67205,1,null,"GO:0042761","very long-chain fatty acid biosynthetic process",12,2,2.23,0.68216,1,null,"GO:0010363","regulation of plant-type hypersensitive response",27,4,4.58,0.48015,1,null,"GO:0006790","sulfur compound metabolic process",381,82,75.45,0.48094,1]
["GO:0045454","cell redox homeostasis",38,4,4.51,0.6759,1,null,"GO:1900457","regulation of brassinosteroid mediated signaling pathway",12,2,2.23,0.68216,1,null,"GO:0010389","regulation of G2/M transition of mitotic cell cycle",27,4,4.58,0.48015,1,null,"GO:0006403","RNA localization",55,17,10.89,0.4835,1]
["GO:0051094","positive regulation of developmental process",126,19,14.96,0.67638,1,null,"GO:0070076","histone lysine demethylation",12,2,2.23,0.68216,1,null,"GO:0051171","regulation of nitrogen compound metabolic process",2830,555,479.73,0.48164,1,null,"GO:0009743","response to carbohydrate",152,36,30.1,0.48352,1]
["GO:0006778","porphyrin-containing compound metabolic process",271,29,32.17,0.67695,1,null,"GO:0016132","brassinosteroid biosynthetic process",12,2,2.23,0.68216,1,null,"GO:0042127","regulation of cell population proliferation",64,13,10.85,0.48684,1,null,"GO:1905421","regulation of plant organ morphogenesis",30,11,5.94,0.48364,1]
["GO:0009785","blue light signaling pathway",19,2,2.26,0.67757,1,null,"GO:0006863","purine nucleobase transport",12,2,2.23,0.68216,1,null,"GO:0090567","reproductive shoot system development",566,89,95.95,0.48954,1,null,"GO:0051788","response to misfolded protein",25,10,4.95,0.48364,1]
["GO:0044089","positive regulation of cellular component biogenesis",19,2,2.26,0.67757,1,null,"GO:0048015","phosphatidylinositol-mediated signaling",12,2,2.23,0.68216,1,null,"GO:0006826","iron ion transport",27,5,4.58,0.49253,1,null,"GO:0072522","purine-containing compound biosynthetic process",113,27,22.38,0.48369,1]
["GO:2000762","regulation of phenylpropanoid metabolic process",19,2,2.26,0.67757,1,null,"GO:0006828","manganese ion transport",12,2,2.23,0.68216,1,null,"GO:0016485","protein processing",58,8,9.83,0.49327,1,null,"GO:0048584","positive regulation of response to stimulus",205,50,40.6,0.48373,1]
["GO:0010052","guard cell differentiation",19,2,2.26,0.67757,1,null,"GO:0006368","transcription elongation by RNA polymerase II",34,3,6.31,0.68281,1,null,"GO:0046148","pigment biosynthetic process",210,40,35.6,0.49823,1,null,"GO:0032881","regulation of polysaccharide metabolic process",39,12,7.72,0.48374,1]
["GO:0019674","NAD metabolic process",19,2,2.26,0.67757,1,null,"GO:0009893","positive regulation of metabolic process",761,115,141.23,0.68315,1,null,"GO:0007154","cell communication",2111,508,357.85,0.50119,1,null,"GO:0034284","response to monosaccharide",65,17,12.87,0.48376,1]
["GO:0012501","programmed cell death",155,13,18.4,0.67782,1,null,"GO:0031331","positive regulation of cellular catabolic process",87,11,16.15,0.68321,1,null,"GO:0009845","seed germination",168,41,28.48,0.50467,1,null,"GO:0006898","receptor-mediated endocytosis",32,10,6.34,0.48382,1]
["GO:0051130","positive regulation of cellular component organization",44,7,5.22,0.67905,1,null,"GO:0006401","RNA catabolic process",123,14,22.83,0.684,1,null,"GO:0045087","innate immune response",221,41,37.46,0.51243,1,null,"GO:0090174","organelle membrane fusion",43,12,8.52,0.48385,1]
["GO:0009086","methionine biosynthetic process",21,4,2.49,0.6791,1,null,"GO:0034655","nucleobase-containing compound catabolic process",149,18,27.65,0.68418,1,null,"GO:0048522","positive regulation of cellular process",807,178,136.8,0.51264,1,null,"GO:0045089","positive regulation of innate immune response",50,13,9.9,0.4839,1]
["GO:0016102","diterpenoid biosynthetic process",31,5,3.68,0.67914,1,null,"GO:0009723","response to ethylene",188,34,34.89,0.68467,1,null,"GO:0071702","organic substance transport",958,183,162.4,0.51973,1,null,"GO:0034312","diol biosynthetic process",13,5,2.57,0.48399,1]
["GO:0031401","positive regulation of protein modification process",36,5,4.27,0.67925,1,null,"GO:0009853","photorespiration",42,7,7.79,0.68514,1,null,"GO:0010558","negative regulation of macromolecule biosynthetic process",262,67,44.41,0.52087,1,null,"GO:0009943","adaxial/abaxial axis specification",21,6,4.16,0.48406,1]
["GO:0048509","regulation of meristem development",50,6,5.94,0.67938,1,null,"GO:0006099","tricarboxylic acid cycle",42,7,7.79,0.68514,1,null,"GO:0033013","tetrapyrrole metabolic process",302,70,51.19,0.5209,1,null,"GO:0009250","glucan biosynthetic process",107,23,21.19,0.48406,1]
["GO:0015850","organic hydroxy compound transport",20,2,2.37,0.67946,1,null,"GO:0031328","positive regulation of cellular biosynthetic process",335,58,62.17,0.68651,1,null,"GO:0032504","multicellular organism reproduction",205,47,34.75,0.52273,1,null,"GO:1902904","negative regulation of supramolecular fiber organization",13,4,2.57,0.48412,1]
["GO:0006573","valine metabolic process",21,2,2.49,0.67948,1,null,"GO:1901361","organic cyclic compound catabolic process",278,50,51.59,0.69818,1,null,"GO:0010498","proteasomal protein catabolic process",229,48,38.82,0.52314,1,null,"GO:0051494","negative regulation of cytoskeleton organization",13,4,2.57,0.48412,1]
["GO:0071229","cellular response to acid chemical",40,4,4.75,0.67953,1,null,"GO:0040007","growth",1115,184,206.93,0.70054,1,null,"GO:0006766","vitamin metabolic process",95,24,16.1,0.52333,1,null,"GO:0032504","multicellular organism reproduction",175,36,34.66,0.48413,1]
["GO:0008643","carbohydrate transport",42,4,4.99,0.67958,1,null,"GO:0071704","organic substance metabolic process",9667,1644,1794.09,0.70193,1,null,"GO:0016106","sesquiterpenoid biosynthetic process",28,12,4.75,0.52342,1,null,"GO:0015868","purine ribonucleotide transport",14,4,2.77,0.48414,1]
["GO:0071370","cellular response to gibberellin stimulus",60,5,7.12,0.67979,1,null,"GO:0008300","isoprenoid catabolic process",20,8,3.71,0.70764,1,null,"GO:0001676","long-chain fatty acid metabolic process",50,13,8.48,0.52378,1,null,"GO:0070918","regulatory ncRNA processing",60,13,11.88,0.48416,1]
["GO:0007059","chromosome segregation",162,12,19.23,0.68078,1,null,"GO:0044092","negative regulation of molecular function",35,10,6.5,0.70776,1,null,"GO:0140115","export across plasma membrane",61,18,10.34,0.52378,1,null,"GO:0046839","phospholipid dephosphorylation",20,5,3.96,0.48417,1]
["GO:0043455","regulation of secondary metabolic process",75,14,8.9,0.684,1,null,"GO:0000272","polysaccharide catabolic process",62,15,11.51,0.70776,1,null,"GO:0046364","monosaccharide biosynthetic process",45,12,7.63,0.5238,1,null,"GO:0034243","regulation of transcription elongation by RNA polymerase II",22,5,4.36,0.48422,1]
["GO:0044265","cellular macromolecule catabolic process",562,38,66.71,0.685,1,null,"GO:0034440","lipid oxidation",50,12,9.28,0.70787,1,null,"GO:0032940","secretion by cell",66,15,11.19,0.52387,1,null,"GO:0055080","monoatomic cation homeostasis",155,31,30.7,0.48426,1]
["GO:2000012","regulation of auxin polar transport",29,3,3.44,0.68587,1,null,"GO:0036503","ERAD pathway",57,13,10.58,0.70791,1,null,"GO:0052545","callose localization",39,10,6.61,0.52393,1,null,"GO:0120251","hydrocarbon biosynthetic process",37,7,7.33,0.48435,1]
["GO:0010182","sugar mediated signaling pathway",39,4,4.63,0.68594,1,null,"GO:0016553","base conversion or substitution editing",26,7,4.83,0.70795,1,null,"GO:0090174","organelle membrane fusion",48,11,8.14,0.524,1,null,"GO:0035510","DNA dealkylation",27,4,5.35,0.48448,1]
["GO:0006400","tRNA modification",70,7,8.31,0.68616,1,null,"GO:0015919","peroxisomal membrane transport",18,5,3.34,0.70802,1,null,"GO:1901336","lactone biosynthetic process",19,6,3.22,0.52401,1,null,"GO:0009765","photosynthesis, light harvesting",25,3,4.95,0.48456,1]
["GO:0044087","regulation of cellular component biogenesis",96,8,11.4,0.68687,1,null,"GO:0045595","regulation of cell differentiation",25,4,4.64,0.70804,1,null,"GO:0001678","intracellular glucose homeostasis",22,6,3.73,0.52408,1,null,"GO:0016116","carotenoid metabolic process",36,5,7.13,0.48458,1]
["GO:0031327","negative regulation of cellular biosynthetic process",309,27,36.68,0.6884,1,null,"GO:0006525","arginine metabolic process",19,4,3.53,0.7082,1,null,"GO:0009062","fatty acid catabolic process",46,10,7.8,0.52409,1,null,"GO:0002181","cytoplasmic translation",77,19,15.25,0.48461,1]
["GO:1901606","alpha-amino acid catabolic process",77,9,9.14,0.68844,1,null,"GO:0015748","organophosphate ester transport",42,8,7.79,0.70824,1,null,"GO:0051445","regulation of meiotic cell cycle",17,5,2.88,0.5241,1,null,"GO:0045862","positive regulation of proteolysis",28,3,5.55,0.48464,1]
["GO:0009646","response to absence of light",48,5,5.7,0.68868,1,null,"GO:0009581","detection of external stimulus",26,5,4.83,0.70824,1,null,"GO:0006555","methionine metabolic process",25,6,4.24,0.52415,1,null,"GO:0052545","callose localization",32,3,6.34,0.48474,1]
["GO:0009072","aromatic amino acid metabolic process",126,19,14.96,0.69421,1,null,"GO:0009582","detection of abiotic stimulus",26,5,4.83,0.70824,1,null,"GO:0045834","positive regulation of lipid metabolic process",32,7,5.42,0.52417,1,null,"GO:0033554","cellular response to stress",962,208,190.51,0.48657,1]
["GO:0006888","endoplasmic reticulum to Golgi vesicle-mediated transport",88,10,10.45,0.69644,1,null,"GO:0009902","chloroplast relocation",16,3,2.97,0.70826,1,null,"GO:0022904","respiratory electron transport chain",51,10,8.65,0.5242,1,null,"GO:0034968","histone lysine methylation",38,8,7.53,0.48754,1]
["GO:0044272","sulfur compound biosynthetic process",238,48,28.25,0.69691,1,null,"GO:0006119","oxidative phosphorylation",54,10,10.02,0.70827,1,null,"GO:0006760","folic acid-containing compound metabolic process",34,7,5.76,0.52422,1,null,"GO:0071805","potassium ion transmembrane transport",33,7,6.54,0.48827,1]
["GO:0006614","SRP-dependent cotranslational protein targeting to membrane",20,2,2.37,0.70512,1,null,"GO:0071218","cellular response to misfolded protein",22,4,4.08,0.70828,1,null,"GO:0035304","regulation of protein dephosphorylation",26,5,4.41,0.5243,1,null,"GO:0098655","monoatomic cation transmembrane transport",123,29,24.36,0.48841,1]
["GO:0009697","salicylic acid biosynthetic process",20,2,2.37,0.70512,1,null,"GO:0006637","acyl-CoA metabolic process",37,6,6.87,0.70839,1,null,"GO:1990748","cellular detoxification",40,7,6.78,0.52435,1,null,"GO:0009615","response to virus",77,17,15.25,0.48856,1]
["GO:0000271","polysaccharide biosynthetic process",229,24,27.18,0.70589,1,null,"GO:0060147","regulation of post-transcriptional gene silencing",16,2,2.97,0.70841,1,null,"GO:0097035","regulation of membrane lipid distribution",17,3,2.88,0.52437,1,null,"GO:2000377","regulation of reactive oxygen species metabolic process",47,11,9.31,0.48858,1]
["GO:0061024","membrane organization",226,23,26.83,0.70606,1,null,"GO:0051503","adenine nucleotide transport",17,2,3.16,0.70843,1,null,"GO:0033260","nuclear DNA replication",14,2,2.37,0.52443,1,null,"GO:0048528","post-embryonic root development",100,31,19.8,0.48878,1]
["GO:0009908","flower development",533,60,63.27,0.70654,1,null,"GO:0006817","phosphate ion transport",17,2,3.16,0.70843,1,null,"GO:0016567","protein ubiquitination",15,2,2.54,0.52446,1,null,"GO:0043069","negative regulation of programmed cell death",28,6,5.55,0.48903,1]
["GO:0015711","organic anion transport",129,16,15.31,0.70787,1,null,"GO:0009116","nucleoside metabolic process",22,2,4.08,0.70857,1,null,"GO:0051168","nuclear export",63,10,10.68,0.52447,1,null,"GO:0017148","negative regulation of translation",73,17,14.46,0.48911,1]
["GO:0042631","cellular response to water deprivation",30,3,3.56,0.70828,1,null,"GO:0050658","RNA transport",52,7,9.65,0.70865,1,null,"GO:0043144","sno(s)RNA processing",16,2,2.71,0.52448,1,null,"GO:0090407","organophosphate biosynthetic process",298,61,59.02,0.48929,1]
["GO:0006098","pentose-phosphate shunt",30,3,3.56,0.70828,1,null,"GO:0042446","hormone biosynthetic process",29,2,5.38,0.70876,1,null,"GO:0006206","pyrimidine nucleobase metabolic process",17,2,2.88,0.5245,1,null,"GO:0071214","cellular response to abiotic stimulus",215,50,42.58,0.48953,1]
["GO:0043069","negative regulation of programmed cell death",30,3,3.56,0.70828,1,null,"GO:0001932","regulation of protein phosphorylation",39,3,7.24,0.70888,1,null,"GO:0071616","acyl-CoA biosynthetic process",23,3,3.9,0.5245,1,null,"GO:0000160","phosphorelay signal transduction system",75,21,14.85,0.48971,1]
["GO:0002229","defense response to oomycetes",42,4,4.99,0.70842,1,null,"GO:0034637","cellular carbohydrate biosynthetic process",169,27,31.36,0.70891,1,null,"GO:0010942","positive regulation of cell death",31,4,5.25,0.52455,1,null,"GO:0000245","spliceosomal complex assembly",23,5,4.55,0.48981,1]
["GO:0043436","oxoacid metabolic process",1734,241,205.84,0.71406,1,null,"GO:0009165","nucleotide biosynthetic process",143,17,26.54,0.70966,1,null,"GO:0050777","negative regulation of immune response",26,3,4.41,0.52457,1,null,"GO:0010025","wax biosynthetic process",23,5,4.55,0.48981,1]
["GO:1901659","glycosyl compound biosynthetic process",96,26,11.4,0.7147,1,null,"GO:0048229","gametophyte development",348,53,64.58,0.71061,1,null,"GO:0009685","gibberellin metabolic process",26,3,4.41,0.52457,1,null,"GO:1900055","regulation of leaf senescence",42,14,8.32,0.48983,1]
["GO:0010029","regulation of seed germination",89,11,10.56,0.71478,1,null,"GO:0000003","reproduction",2213,393,410.71,0.71129,1,null,"GO:0051240","positive regulation of multicellular organismal process",93,20,15.76,0.52464,1,null,"GO:0019827","stem cell population maintenance",58,17,11.49,0.48987,1]
["GO:0072528","pyrimidine-containing compound biosynthetic process",42,12,4.99,0.71613,1,null,"GO:0090351","seedling development",182,38,33.78,0.71147,1,null,"GO:0009943","adaxial/abaxial axis specification",24,2,4.07,0.52466,1,null,"GO:0065002","intracellular protein transmembrane transport",90,17,17.82,0.49023,1]
["GO:0009308","amine metabolic process",114,18,13.53,0.71661,1,null,"GO:0048582","positive regulation of post-embryonic development",65,12,12.06,0.71257,1,null,"GO:0009932","cell tip growth",135,26,22.88,0.52492,1,null,"GO:0048765","root hair cell differentiation",96,22,19.01,0.49043,1]
["GO:0052542","defense response by callose deposition",25,7,2.97,0.71669,1,null,"GO:0062013","positive regulation of small molecule metabolic process",19,3,3.53,0.71268,1,null,"GO:0006515","protein quality control for misfolded or incompletely synthesized proteins",32,8,5.42,0.52506,1,null,"GO:0000966","RNA 5'-end processing",18,4,3.56,0.49056,1]
["GO:0016042","lipid catabolic process",110,16,13.06,0.71689,1,null,"GO:0016126","sterol biosynthetic process",19,3,3.53,0.71268,1,null,"GO:0035265","organ growth",24,6,4.07,0.52509,1,null,"GO:0006573","valine metabolic process",18,4,3.56,0.49056,1]
["GO:0051568","histone H3-K4 methylation",10,1,1.19,0.71748,1,null,"GO:0000162","tryptophan biosynthetic process",19,3,3.53,0.71268,1,null,"GO:0052543","callose deposition in cell wall",25,5,4.24,0.52533,1,null,"GO:0044089","positive regulation of cellular component biogenesis",18,4,3.56,0.49056,1]
["GO:0019400","alditol metabolic process",10,1,1.19,0.71748,1,null,"GO:0006893","Golgi to plasma membrane transport",19,3,3.53,0.71268,1,null,"GO:0006000","fructose metabolic process",10,2,1.7,0.52542,1,null,"GO:2000904","regulation of starch metabolic process",18,4,3.56,0.49056,1]
["GO:0007094","mitotic spindle assembly checkpoint signaling",10,1,1.19,0.71748,1,null,"GO:0048768","root hair cell tip growth",19,3,3.53,0.71268,1,null,"GO:0016575","histone deacetylation",10,2,1.7,0.52542,1,null,"GO:0016119","carotene metabolic process",18,4,3.56,0.49056,1]
["GO:0007098","centrosome cycle",10,1,1.19,0.71748,1,null,"GO:0010492","maintenance of shoot apical meristem identity",19,3,3.53,0.71268,1,null,"GO:0031048","RNA-mediated heterochromatin formation",10,2,1.7,0.52542,1,null,"GO:0008356","asymmetric cell division",18,4,3.56,0.49056,1]
["GO:0030261","chromosome condensation",10,1,1.19,0.71748,1,null,"GO:0006090","pyruvate metabolic process",69,10,12.81,0.71326,1,null,"GO:0030308","negative regulation of cell growth",10,2,1.7,0.52542,1,null,"GO:0019751","polyol metabolic process",47,11,9.31,0.49069,1]
["GO:0009757","hexose mediated signaling",10,1,1.19,0.71748,1,null,"GO:0071702","organic substance transport",868,140,161.09,0.71438,1,null,"GO:0140547","acquisition of seed longevity",10,2,1.7,0.52542,1,null,"GO:0009937","regulation of gibberellic acid mediated signaling pathway",19,5,3.76,0.49078,1]
["GO:0007019","microtubule depolymerization",10,1,1.19,0.71748,1,null,"GO:0031327","negative regulation of cellular biosynthetic process",270,43,50.11,0.71474,1,null,"GO:0043649","dicarboxylic acid catabolic process",10,2,1.7,0.52542,1,null,"GO:0000096","sulfur amino acid metabolic process",50,11,9.9,0.49081,1]
["GO:0010161","red light signaling pathway",10,1,1.19,0.71748,1,null,"GO:0097659","nucleic acid-templated transcription",1640,260,304.37,0.71545,1,null,"GO:0043605","amide catabolic process",10,2,1.7,0.52542,1,null,"GO:0006816","calcium ion transport",47,11,9.31,0.49083,1]
["GO:0006388","tRNA splicing, via endonucleolytic cleavage and ligation",10,1,1.19,0.71748,1,null,"GO:0042023","DNA endoreduplication",37,8,6.87,0.72506,1,null,"GO:2000037","regulation of stomatal complex patterning",10,2,1.7,0.52542,1,null,"GO:0032786","positive regulation of DNA-templated transcription, elongation",27,6,5.35,0.4909,1]
["GO:0006621","protein retention in ER lumen",10,1,1.19,0.71748,1,null,"GO:0044283","small molecule biosynthetic process",710,145,131.77,0.7251,1,null,"GO:0051090","regulation of DNA-binding transcription factor activity",10,2,1.7,0.52542,1,null,"GO:0006575","cellular modified amino acid metabolic process",48,10,9.51,0.49093,1]
["GO:0051438","regulation of ubiquitin-protein transferase activity",10,1,1.19,0.71748,1,null,"GO:0019432","triglyceride biosynthetic process",13,2,2.41,0.72538,1,null,"GO:0071267","L-methionine salvage",10,2,1.7,0.52542,1,null,"GO:0048232","male gamete generation",38,8,7.53,0.49094,1]
["GO:0010215","cellulose microfibril organization",10,1,1.19,0.71748,1,null,"GO:0009089","lysine biosynthetic process via diaminopimelate",13,2,2.41,0.72538,1,null,"GO:0043462","regulation of ATP-dependent activity",10,2,1.7,0.52542,1,null,"GO:0051130","positive regulation of cellular component organization",41,8,8.12,0.49105,1]
["GO:0030837","negative regulation of actin filament polymerization",10,1,1.19,0.71748,1,null,"GO:0009862","systemic acquired resistance, salicylic acid mediated signaling pathway",13,2,2.41,0.72538,1,null,"GO:0046683","response to organophosphorus",10,2,1.7,0.52542,1,null,"GO:1903338","regulation of cell wall organization or biogenesis",23,4,4.55,0.49114,1]
["GO:0034475","U4 snRNA 3'-end processing",10,1,1.19,0.71748,1,null,"GO:1900865","chloroplast RNA modification",13,2,2.41,0.72538,1,null,"GO:0015908","fatty acid transport",10,2,1.7,0.52542,1,null,"GO:0019432","triglyceride biosynthetic process",13,3,2.57,0.49115,1]
["GO:0010037","response to carbon dioxide",10,1,1.19,0.71748,1,null,"GO:0006448","regulation of translational elongation",13,2,2.41,0.72538,1,null,"GO:0009303","rRNA transcription",10,2,1.7,0.52542,1,null,"GO:0010196","nonphotochemical quenching",13,3,2.57,0.49115,1]
["GO:0006116","NADH oxidation",10,1,1.19,0.71748,1,null,"GO:0052325","cell wall pectin biosynthetic process",13,2,2.41,0.72538,1,null,"GO:0030837","negative regulation of actin filament polymerization",10,2,1.7,0.52542,1,null,"GO:0051347","positive regulation of transferase activity",13,3,2.57,0.49115,1]
["GO:0110095","cellular detoxification of aldehyde",10,1,1.19,0.71748,1,null,"GO:0032527","protein exit from endoplasmic reticulum",13,2,2.41,0.72538,1,null,"GO:0050994","regulation of lipid catabolic process",10,2,1.7,0.52542,1,null,"GO:0035195","miRNA-mediated gene silencing",13,3,2.57,0.49115,1]
["GO:0051211","anisotropic cell growth",10,1,1.19,0.71748,1,null,"GO:0006782","protoporphyrinogen IX biosynthetic process",13,2,2.41,0.72538,1,null,"GO:0001709","cell fate determination",10,2,1.7,0.52542,1,null,"GO:0009862","systemic acquired resistance, salicylic acid mediated signaling pathway",13,3,2.57,0.49115,1]
["GO:0016444","somatic cell DNA recombination",10,1,1.19,0.71748,1,null,"GO:0090068","positive regulation of cell cycle process",23,3,4.27,0.72555,1,null,"GO:0110095","cellular detoxification of aldehyde",10,2,1.7,0.52542,1,null,"GO:0010100","negative regulation of photomorphogenesis",13,3,2.57,0.49115,1]
["GO:1901989","positive regulation of cell cycle phase transition",10,1,1.19,0.71748,1,null,"GO:0010192","mucilage biosynthetic process",26,3,4.83,0.72567,1,null,"GO:0006722","triterpenoid metabolic process",10,2,1.7,0.52542,1,null,"GO:1900865","chloroplast RNA modification",13,3,2.57,0.49115,1]
["GO:0009445","putrescine metabolic process",10,1,1.19,0.71748,1,null,"GO:0010053","root epidermal cell differentiation",114,18,21.16,0.72594,1,null,"GO:0009903","chloroplast avoidance movement",10,2,1.7,0.52542,1,null,"GO:1901403","positive regulation of tetrapyrrole metabolic process",13,3,2.57,0.49115,1]
["GO:0015908","fatty acid transport",10,1,1.19,0.71748,1,null,"GO:0071555","cell wall organization",169,26,31.36,0.7264,1,null,"GO:0006880","intracellular sequestering of iron ion",10,2,1.7,0.52542,1,null,"GO:0052325","cell wall pectin biosynthetic process",13,3,2.57,0.49115,1]
["GO:0006901","vesicle coating",10,1,1.19,0.71748,1,null,"GO:0010029","regulation of seed germination",81,14,15.03,0.73282,1,null,"GO:0007019","microtubule depolymerization",10,2,1.7,0.52542,1,null,"GO:0050688","regulation of defense response to virus",13,3,2.57,0.49115,1]
["GO:0015740","C4-dicarboxylate transport",10,1,1.19,0.71748,1,null,"GO:0009736","cytokinin-activated signaling pathway",46,8,8.54,0.73401,1,null,"GO:0071586","CAAX-box protein processing",10,2,1.7,0.52542,1,null,"GO:0032527","protein exit from endoplasmic reticulum",13,3,2.57,0.49115,1]
["GO:2001289","lipid X metabolic process",10,1,1.19,0.71748,1,null,"GO:0010118","stomatal movement",124,20,23.01,0.7348,1,null,"GO:0044093","positive regulation of molecular function",81,14,13.73,0.52543,1,null,"GO:0051781","positive regulation of cell division",13,3,2.57,0.49115,1]
["GO:0006000","fructose metabolic process",10,1,1.19,0.71748,1,null,"GO:0048532","anatomical structure arrangement",101,14,18.74,0.73535,1,null,"GO:2000030","regulation of response to red or far red light",47,8,7.97,0.52548,1,null,"GO:0006782","protoporphyrinogen IX biosynthetic process",13,3,2.57,0.49115,1]
["GO:0019320","hexose catabolic process",10,1,1.19,0.71748,1,null,"GO:0009624","response to nematode",56,9,10.39,0.7357,1,null,"GO:0042886","amide transport",31,6,5.25,0.52552,1,null,"GO:0019359","nicotinamide nucleotide biosynthetic process",13,3,2.57,0.49115,1]
["GO:0070734","histone H3-K27 methylation",10,1,1.19,0.71748,1,null,"GO:2000028","regulation of photoperiodism, flowering",78,10,14.48,0.737,1,null,"GO:0044038","cell wall macromolecule biosynthetic process",78,4,13.22,0.52562,1,null,"GO:0007155","cell adhesion",13,3,2.57,0.49115,1]
["GO:0050994","regulation of lipid catabolic process",10,1,1.19,0.71748,1,null,"GO:0051453","regulation of intracellular pH",26,4,4.83,0.73788,1,null,"GO:1901136","carbohydrate derivative catabolic process",47,10,7.97,0.52563,1,null,"GO:0031058","positive regulation of histone modification",13,3,2.57,0.49115,1]
["GO:0071324","cellular response to disaccharide stimulus",10,1,1.19,0.71748,1,null,"GO:2000012","regulation of auxin polar transport",26,4,4.83,0.73788,1,null,"GO:0006360","transcription by RNA polymerase I",16,3,2.71,0.52564,1,null,"GO:0048766","root hair initiation",13,3,2.57,0.49115,1]
["GO:1903338","regulation of cell wall organization or biogenesis",34,2,4.04,0.71782,1,null,"GO:0009926","auxin polar transport",77,10,14.29,0.73886,1,null,"GO:2000038","regulation of stomatal complex development",16,3,2.71,0.52564,1,null,"GO:0043562","cellular response to nitrogen levels",31,5,6.14,0.49126,1]
["GO:0006913","nucleocytoplasmic transport",107,10,12.7,0.71795,1,null,"GO:0000963","mitochondrial RNA processing",32,8,5.94,0.74537,1,null,"GO:0071248","cellular response to metal ion",16,3,2.71,0.52564,1,null,"GO:0048359","mucilage metabolic process involved in seed coat development",21,3,4.16,0.49126,1]
["GO:0043488","regulation of mRNA stability",60,3,7.12,0.71821,1,null,"GO:0030422","siRNA processing",35,6,6.5,0.74599,1,null,"GO:0019432","triglyceride biosynthetic process",16,3,2.71,0.52564,1,null,"GO:0042176","regulation of protein catabolic process",42,6,8.32,0.49149,1]
["GO:0019953","sexual reproduction",119,9,14.13,0.71841,1,null,"GO:0006094","gluconeogenesis",20,3,3.71,0.74604,1,null,"GO:0009901","anther dehiscence",16,3,2.71,0.52564,1,null,"GO:0009072","aromatic amino acid metabolic process",98,13,19.41,0.49154,1]
["GO:0010558","negative regulation of macromolecule biosynthetic process",262,22,31.1,0.71916,1,null,"GO:0000271","polysaccharide biosynthetic process",194,28,36,0.74783,1,null,"GO:0010196","nonphotochemical quenching",16,3,2.71,0.52564,1,null,"GO:0071555","cell wall organization",169,27,33.47,0.49289,1]
["GO:0050801","monoatomic ion homeostasis",197,10,23.39,0.71996,1,null,"GO:0009910","negative regulation of flower development",45,7,8.35,0.7549,1,null,"GO:0010120","camalexin biosynthetic process",16,3,2.71,0.52564,1,null,"GO:0033993","response to lipid",1751,415,346.76,0.49434,1]
["GO:0009631","cold acclimation",50,5,5.94,0.7233,1,null,"GO:0030154","cell differentiation",791,136,146.8,0.75499,1,null,"GO:0070646","protein modification by small protein removal",90,13,15.26,0.52594,1,null,"GO:0006629","lipid metabolic process",1005,190,199.03,0.51218,1]
["GO:0006518","peptide metabolic process",612,179,72.65,0.73032,1,null,"GO:0009789","positive regulation of abscisic acid-activated signaling pathway",39,6,7.24,0.75628,1,null,"GO:1900376","regulation of secondary metabolite biosynthetic process",22,4,3.73,0.52615,1,null,"GO:0032502","developmental process",4312,974,853.94,0.52241,1]
["GO:0010112","regulation of systemic acquired resistance",21,2,2.49,0.73067,1,null,"GO:0006096","glycolytic process",39,6,7.24,0.75628,1,null,"GO:0000245","spliceosomal complex assembly",22,4,3.73,0.52615,1,null,"GO:0031348","negative regulation of defense response",66,12,13.07,0.52302,1]
["GO:0042537","benzene-containing compound metabolic process",61,5,7.24,0.73113,1,null,"GO:0019252","starch biosynthetic process",33,5,6.12,0.7594,1,null,"GO:0060627","regulation of vesicle-mediated transport",22,4,3.73,0.52615,1,null,"GO:0009658","chloroplast organization",205,39,40.6,0.52304,1]
["GO:0009734","auxin-activated signaling pathway",95,11,11.28,0.73127,1,null,"GO:0019722","calcium-mediated signaling",33,5,6.12,0.7594,1,null,"GO:0008285","negative regulation of cell population proliferation",22,4,3.73,0.52615,1,null,"GO:0006869","lipid transport",65,11,12.87,0.52334,1]
["GO:0055088","lipid homeostasis",41,4,4.87,0.73353,1,null,"GO:0016053","organic acid biosynthetic process",471,102,87.41,0.76045,1,null,"GO:0098813","nuclear chromosome segregation",124,7,21.02,0.52626,1,null,"GO:0010090","trichome morphogenesis",50,12,9.9,0.52542,1]
["GO:0071702","organic substance transport",958,97,113.72,0.73487,1,null,"GO:0031668","cellular response to extracellular stimulus",158,36,29.32,0.76147,1,null,"GO:0048443","stamen development",73,12,12.37,0.52634,1,null,"GO:0016049","cell growth",475,100,94.07,0.52575,1]
["GO:0032787","monocarboxylic acid metabolic process",651,90,77.28,0.73962,1,null,"GO:0045944","positive regulation of transcription by RNA polymerase II",81,13,15.03,0.76155,1,null,"GO:0006568","tryptophan metabolic process",48,7,8.14,0.52729,1,null,"GO:0062012","regulation of small molecule metabolic process",133,36,26.34,0.52739,1]
["GO:0010286","heat acclimation",62,6,7.36,0.73967,1,null,"GO:0050790","regulation of catalytic activity",141,29,26.17,0.76201,1,null,"GO:2000022","regulation of jasmonic acid mediated signaling pathway",34,6,5.76,0.52761,1,null,"GO:0044249","cellular biosynthetic process",4106,918,813.14,0.5276,1]
["GO:0007623","circadian rhythm",160,14,18.99,0.74264,1,null,"GO:0000959","mitochondrial RNA metabolic process",70,15,12.99,0.76212,1,null,"GO:0016192","vesicle-mediated transport",479,89,81.2,0.53275,1,null,"GO:0080147","root hair cell development",81,17,16.04,0.53033,1]
["GO:0006890","retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum",32,3,3.8,0.74938,1,null,"GO:0006595","polyamine metabolic process",18,3,3.34,0.76245,1,null,"GO:0071704","organic substance metabolic process",11211,1844,1900.43,0.54573,1,null,"GO:0042364","water-soluble vitamin biosynthetic process",49,10,9.7,0.53055,1]
["GO:0048868","pollen tube development",154,16,18.28,0.74985,1,null,"GO:0071229","cellular response to acid chemical",29,5,5.38,0.76246,1,null,"GO:0008610","lipid biosynthetic process",722,135,122.39,0.54873,1,null,"GO:1901259","chloroplast rRNA processing",24,5,4.75,0.53057,1]
["GO:0000460","maturation of 5.8S rRNA",31,5,3.68,0.75074,1,null,"GO:0031329","regulation of cellular catabolic process",124,20,23.01,0.76282,1,null,"GO:0019538","protein metabolic process",3476,570,589.23,0.55023,1,null,"GO:0009407","toxin catabolic process",24,5,4.75,0.53057,1]
["GO:0007154","cell communication",2111,181,250.59,0.75075,1,null,"GO:0006605","protein targeting",218,37,40.46,0.76289,1,null,"GO:0010090","trichome morphogenesis",64,11,10.85,0.55783,1,null,"GO:0090351","seedling development",182,49,36.04,0.53257,1]
["GO:0006479","protein methylation",83,11,9.85,0.75077,1,null,"GO:0032509","endosome transport via multivesicular body sorting pathway",32,2,5.94,0.76295,1,null,"GO:0030968","endoplasmic reticulum unfolded protein response",29,5,4.92,0.56007,1,null,"GO:0022603","regulation of anatomical structure morphogenesis",119,28,23.57,0.53514,1]
["GO:0009063","amino acid catabolic process",82,9,9.73,0.75084,1,null,"GO:0009629","response to gravity",72,7,13.36,0.76328,1,null,"GO:0010091","trichome branching",29,5,4.92,0.56007,1,null,"GO:2000280","regulation of root development",33,9,6.54,0.53574,1]
["GO:0002758","innate immune response-activating signaling pathway",32,4,3.8,0.75094,1,null,"GO:0006835","dicarboxylic acid transport",14,2,2.6,0.76351,1,null,"GO:2000012","regulation of auxin polar transport",29,5,4.92,0.56007,1,null,"GO:0045324","late endosome to vacuole transport",44,11,8.71,0.53579,1]
["GO:0009231","riboflavin biosynthetic process",11,1,1.31,0.75104,1,null,"GO:0009750","response to fructose",14,2,2.6,0.76351,1,null,"GO:0048582","positive regulation of post-embryonic development",77,17,13.05,0.56233,1,null,"GO:0032968","positive regulation of transcription elongation by RNA polymerase II",19,4,3.76,0.5364,1]
["GO:0000289","nuclear-transcribed mRNA poly(A) tail shortening",11,1,1.31,0.75104,1,null,"GO:0007032","endosome organization",14,2,2.6,0.76351,1,null,"GO:0043255","regulation of carbohydrate biosynthetic process",52,11,8.81,0.56285,1,null,"GO:0010506","regulation of autophagy",19,4,3.76,0.5364,1]
["GO:0009097","isoleucine biosynthetic process",11,1,1.31,0.75104,1,null,"GO:0048564","photosystem I assembly",14,2,2.6,0.76351,1,null,"GO:1905039","carboxylic acid transmembrane transport",66,12,11.19,0.56326,1,null,"GO:0006996","organelle organization",1268,231,251.11,0.54217,1]
["GO:0010405","arabinogalactan protein metabolic process",11,1,1.31,0.75104,1,null,"GO:0005983","starch catabolic process",14,2,2.6,0.76351,1,null,"GO:0009693","ethylene biosynthetic process",23,4,3.9,0.56347,1,null,"GO:0071365","cellular response to auxin stimulus",90,27,17.82,0.54233,1]
["GO:0031396","regulation of protein ubiquitination",11,1,1.31,0.75104,1,null,"GO:0006120","mitochondrial electron transport, NADH to ubiquinone",14,2,2.6,0.76351,1,null,"GO:0009625","response to insect",23,4,3.9,0.56347,1,null,"GO:0007264","small GTPase mediated signal transduction",25,11,4.95,0.54314,1]
["GO:0034508","centromere complex assembly",11,1,1.31,0.75104,1,null,"GO:0009682","induced systemic resistance",14,2,2.6,0.76351,1,null,"GO:0048468","cell development",341,57,57.8,0.56374,1,null,"GO:0006835","dicarboxylic acid transport",14,3,2.77,0.54463,1]
["GO:0006646","phosphatidylethanolamine biosynthetic process",11,1,1.31,0.75104,1,null,"GO:0019853","L-ascorbic acid biosynthetic process",14,2,2.6,0.76351,1,null,"GO:0045814","negative regulation of gene expression, epigenetic",60,8,10.17,0.56414,1,null,"GO:0007032","endosome organization",14,3,2.77,0.54463,1]
["GO:0090110","COPII-coated vesicle cargo loading",11,1,1.31,0.75104,1,null,"GO:0009641","shade avoidance",14,2,2.6,0.76351,1,null,"GO:0006793","phosphorus metabolic process",1600,326,271.22,0.5651,1,null,"GO:0035999","tetrahydrofolate interconversion",14,3,2.77,0.54463,1]
["GO:0070370","cellular heat acclimation",11,1,1.31,0.75104,1,null,"GO:1901292","nucleoside phosphate catabolic process",14,2,2.6,0.76351,1,null,"GO:0016051","carbohydrate biosynthetic process",342,64,57.97,0.56753,1,null,"GO:0055075","potassium ion homeostasis",14,3,2.77,0.54463,1]
["GO:0010200","response to chitin",11,1,1.31,0.75104,1,null,"GO:0043173","nucleotide salvage",14,2,2.6,0.76351,1,null,"GO:0007029","endoplasmic reticulum organization",31,7,5.25,0.56864,1,null,"GO:0051017","actin filament bundle assembly",14,3,2.77,0.54463,1]
["GO:0010205","photoinhibition",11,1,1.31,0.75104,1,null,"GO:0006002","fructose 6-phosphate metabolic process",14,2,2.6,0.76351,1,null,"GO:0061157","mRNA destabilization",50,10,8.48,0.5687,1,null,"GO:0043094","cellular metabolic compound salvage",70,12,13.86,0.54517,1]
["GO:1902369","negative regulation of RNA catabolic process",11,1,1.31,0.75104,1,null,"GO:0010256","endomembrane system organization",102,14,18.93,0.76436,1,null,"GO:0002183","cytoplasmic translational initiation",17,3,2.88,0.56905,1,null,"GO:0009793","embryo development ending in seed dormancy",583,122,115.46,0.55004,1]
["GO:0009643","photosynthetic acclimation",11,1,1.31,0.75104,1,null,"GO:0000373","Group II intron splicing",27,4,5.01,0.76534,1,null,"GO:2000023","regulation of lateral root development",17,3,2.88,0.56905,1,null,"GO:0009742","brassinosteroid mediated signaling pathway",52,11,10.3,0.55044,1]
["GO:0048199","vesicle targeting, to, from or within Golgi",11,1,1.31,0.75104,1,null,"GO:0009664","plant-type cell wall organization",107,11,19.86,0.76747,1,null,"GO:0051555","flavonol biosynthetic process",17,3,2.88,0.56905,1,null,"GO:0048481","plant ovule development",40,8,7.92,0.55071,1]
["GO:0015918","sterol transport",11,1,1.31,0.75104,1,null,"GO:1990110","callus formation",21,3,3.9,0.77623,1,null,"GO:0006417","regulation of translation",118,20,20,0.56909,1,null,"GO:0010162","seed dormancy process",52,10,10.3,0.55087,1]
["GO:0000467","exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, L...",11,1,1.31,0.75104,1,null,"GO:0045926","negative regulation of growth",21,3,3.9,0.77623,1,null,"GO:0031668","cellular response to extracellular stimulus",197,62,33.39,0.57355,1,null,"GO:0034976","response to endoplasmic reticulum stress",109,24,21.59,0.55488,1]
["GO:0030497","fatty acid elongation",11,1,1.31,0.75104,1,null,"GO:0010675","regulation of cellular carbohydrate metabolic process",47,4,8.72,0.77711,1,null,"GO:0098876","vesicle-mediated transport to the plasma membrane",30,7,5.09,0.57908,1,null,"GO:0044262","cellular carbohydrate metabolic process",283,67,56.04,0.55565,1]
["GO:0051703","biological process involved in intraspecies interaction between organisms",11,1,1.31,0.75104,1,null,"GO:0009742","brassinosteroid mediated signaling pathway",52,8,9.65,0.77826,1,null,"GO:0010375","stomatal complex patterning",21,4,3.56,0.57938,1,null,"GO:0000470","maturation of LSU-rRNA",27,8,5.35,0.5574,1]
["GO:1901071","glucosamine-containing compound metabolic process",11,1,1.31,0.75104,1,null,"GO:0010565","regulation of cellular ketone metabolic process",96,16,17.82,0.77831,1,null,"GO:1901879","regulation of protein depolymerization",11,2,1.86,0.57944,1,null,"GO:0002218","activation of innate immune response",38,10,7.53,0.55744,1]
["GO:0045931","positive regulation of mitotic cell cycle",11,1,1.31,0.75104,1,null,"GO:0019439","aromatic compound catabolic process",254,43,47.14,0.77907,1,null,"GO:0015695","organic cation transport",11,2,1.86,0.57944,1,null,"GO:0043488","regulation of mRNA stability",59,14,11.68,0.55747,1]
["GO:0031053","primary miRNA processing",11,1,1.31,0.75104,1,null,"GO:0010605","negative regulation of macromolecule metabolic process",573,88,106.34,0.77927,1,null,"GO:0051123","RNA polymerase II preinitiation complex assembly",11,2,1.86,0.57944,1,null,"GO:2000030","regulation of response to red or far red light",44,11,8.71,0.55748,1]
["GO:0033356","UDP-L-arabinose metabolic process",11,1,1.31,0.75104,1,null,"GO:0048869","cellular developmental process",892,150,165.55,0.77957,1,null,"GO:0006655","phosphatidylglycerol biosynthetic process",11,2,1.86,0.57944,1,null,"GO:0009086","methionine biosynthetic process",19,4,3.76,0.5579,1]
["GO:0006814","sodium ion transport",11,1,1.31,0.75104,1,null,"GO:0050794","regulation of cellular process",3940,637,731.22,0.7796,1,null,"GO:0009861","jasmonic acid and ethylene-dependent systemic resistance",11,2,1.86,0.57944,1,null,"GO:0045491","xylan metabolic process",24,4,4.75,0.55811,1]
["GO:0045005","DNA-templated DNA replication maintenance of fidelity",11,1,1.31,0.75104,1,null,"GO:0031325","positive regulation of cellular metabolic process",514,79,95.39,0.77991,1,null,"GO:0009097","isoleucine biosynthetic process",11,2,1.86,0.57944,1,null,"GO:0043933","protein-containing complex organization",545,96,107.93,0.5605,1]
["GO:1901879","regulation of protein depolymerization",11,1,1.31,0.75104,1,null,"GO:0009966","regulation of signal transduction",345,58,64.03,0.78037,1,null,"GO:0033356","UDP-L-arabinose metabolic process",11,2,1.86,0.57944,1,null,"GO:0008219","cell death",180,35,35.65,0.56227,1]
["GO:0009083","branched-chain amino acid catabolic process",23,2,2.73,0.75111,1,null,"GO:0007018","microtubule-based movement",34,5,6.31,0.78281,1,null,"GO:1902369","negative regulation of RNA catabolic process",11,2,1.86,0.57944,1,null,"GO:0048868","pollen tube development",166,31,32.87,0.56273,1]
["GO:0006405","RNA export from nucleus",46,3,5.46,0.75143,1,null,"GO:0031348","negative regulation of defense response",66,9,12.25,0.78338,1,null,"GO:0009616","RNAi-mediated antiviral immune response",11,2,1.86,0.57944,1,null,"GO:0009593","detection of chemical stimulus",25,5,4.95,0.56979,1]
["GO:0046165","alcohol biosynthetic process",71,5,8.43,0.7516,1,null,"GO:1990542","mitochondrial transmembrane transport",54,11,10.02,0.78995,1,null,"GO:0000578","embryonic axis specification",11,2,1.86,0.57944,1,null,"GO:0009644","response to high light intensity",51,10,10.1,0.57002,1]
["GO:0008299","isoprenoid biosynthetic process",161,15,19.11,0.75173,1,null,"GO:0006506","GPI anchor biosynthetic process",28,4,5.2,0.79051,1,null,"GO:0015918","sterol transport",11,2,1.86,0.57944,1,null,"GO:0007154","cell communication",1768,441,350.13,0.57185,1]
["GO:0010214","seed coat development",44,6,5.22,0.75397,1,null,"GO:0003333","amino acid transmembrane transport",28,4,5.2,0.79051,1,null,"GO:0006904","vesicle docking involved in exocytosis",11,2,1.86,0.57944,1,null,"GO:0051172","negative regulation of nitrogen compound metabolic process",301,76,59.61,0.57508,1]
["GO:0048508","embryonic meristem development",32,4,3.8,0.75411,1,null,"GO:0006914","autophagy",80,13,14.85,0.79068,1,null,"GO:0048199","vesicle targeting, to, from or within Golgi",11,2,1.86,0.57944,1,null,"GO:0000271","polysaccharide biosynthetic process",194,40,38.42,0.5796,1]
["GO:0006536","glutamate metabolic process",22,2,2.61,0.75432,1,null,"GO:0044271","cellular nitrogen compound biosynthetic process",2920,440,541.92,0.79437,1,null,"GO:0019288","isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway",11,2,1.86,0.57944,1,null,"GO:0006081","cellular aldehyde metabolic process",49,10,9.7,0.57998,1]
["GO:0048443","stamen development",73,7,8.67,0.75459,1,null,"GO:0048444","floral organ morphogenesis",31,5,5.75,0.79695,1,null,"GO:0007009","plasma membrane organization",11,2,1.86,0.57944,1,null,"GO:0009693","ethylene biosynthetic process",20,4,3.96,0.58006,1]
["GO:0015698","inorganic anion transport",71,4,8.43,0.75529,1,null,"GO:0006558","L-phenylalanine metabolic process",15,2,2.78,0.79696,1,null,"GO:0042753","positive regulation of circadian rhythm",11,2,1.86,0.57944,1,null,"GO:0009695","jasmonic acid biosynthetic process",20,4,3.96,0.58006,1]
["GO:0044255","cellular lipid metabolic process",959,111,113.84,0.76568,1,null,"GO:0000054","ribosomal subunit export from nucleus",15,2,2.78,0.79696,1,null,"GO:0006612","protein targeting to membrane",68,9,11.53,0.58184,1,null,"GO:0000302","response to reactive oxygen species",122,23,24.16,0.58042,1]
["GO:0048468","cell development",341,45,40.48,0.77484,1,null,"GO:0010152","pollen maturation",15,2,2.78,0.79696,1,null,"GO:0060560","developmental growth involved in morphogenesis",426,73,72.21,0.58321,1,null,"GO:0023051","regulation of signaling",349,103,69.12,0.58157,1]
["GO:0006094","gluconeogenesis",23,2,2.73,0.77615,1,null,"GO:0046854","phosphatidylinositol phosphate biosynthetic process",15,2,2.78,0.79696,1,null,"GO:0006886","intracellular protein transport",448,76,75.94,0.58515,1,null,"GO:0010498","proteasomal protein catabolic process",222,67,43.96,0.58317,1]
["GO:1900426","positive regulation of defense response to bacterium",23,2,2.73,0.77615,1,null,"GO:0006144","purine nucleobase metabolic process",15,2,2.78,0.79696,1,null,"GO:0009630","gravitropism",86,17,14.58,0.58625,1,null,"GO:0009062","fatty acid catabolic process",44,19,8.71,0.585,1]
["GO:0007186","G protein-coupled receptor signaling pathway",23,2,2.73,0.77615,1,null,"GO:0006298","mismatch repair",15,2,2.78,0.79696,1,null,"GO:0006413","translational initiation",53,9,8.98,0.58713,1,null,"GO:0019395","fatty acid oxidation",44,19,8.71,0.585,1]
["GO:0048653","anther development",51,5,6.05,0.77623,1,null,"GO:0010584","pollen exine formation",15,2,2.78,0.79696,1,null,"GO:0009809","lignin biosynthetic process",36,6,6.1,0.58717,1,null,"GO:0042908","xenobiotic transport",28,11,5.55,0.58567,1]
["GO:0040008","regulation of growth",289,29,34.31,0.77729,1,null,"GO:0048235","pollen sperm cell differentiation",15,2,2.78,0.79696,1,null,"GO:0009735","response to cytokinin",101,16,17.12,0.58754,1,null,"GO:0046364","monosaccharide biosynthetic process",40,13,7.92,0.58573,1]
["GO:0032508","DNA duplex unwinding",25,8,2.97,0.77966,1,null,"GO:0008361","regulation of cell size",15,2,2.78,0.79696,1,null,"GO:0016311","dephosphorylation",196,59,33.22,0.59142,1,null,"GO:0006892","post-Golgi vesicle-mediated transport",36,11,7.13,0.5859,1]
["GO:0044262","cellular carbohydrate metabolic process",351,46,41.67,0.77977,1,null,"GO:0048468","cell development",298,53,55.31,0.79724,1,null,"GO:0006518","peptide metabolic process",612,45,103.74,0.59176,1,null,"GO:2001057","reactive nitrogen species metabolic process",15,6,2.97,0.58601,1]
["GO:0006084","acetyl-CoA metabolic process",31,4,3.68,0.78048,1,null,"GO:0030490","maturation of SSU-rRNA",51,4,9.47,0.79781,1,null,"GO:0010078","maintenance of root meristem identity",30,5,5.09,0.59209,1,null,"GO:0006779","porphyrin-containing compound biosynthetic process",86,20,17.03,0.58602,1]
["GO:0010440","stomatal lineage progression",23,3,2.73,0.78049,1,null,"GO:0005976","polysaccharide metabolic process",312,51,57.9,0.7981,1,null,"GO:0006357","regulation of transcription by RNA polymerase II",302,53,51.19,0.59534,1,null,"GO:0043144","sno(s)RNA processing",16,6,3.17,0.58604,1]
["GO:1902288","regulation of defense response to oomycetes",12,1,1.42,0.78061,1,null,"GO:0140694","non-membrane-bounded organelle assembly",115,11,21.34,0.79871,1,null,"GO:0009991","response to extracellular stimulus",278,91,47.13,0.59881,1,null,"GO:0043487","regulation of RNA stability",63,15,12.48,0.58608,1]
["GO:0006566","threonine metabolic process",12,1,1.42,0.78061,1,null,"GO:0051302","regulation of cell division",54,7,10.02,0.799,1,null,"GO:2000280","regulation of root development",43,8,7.29,0.59888,1,null,"GO:0046519","sphingoid metabolic process",16,5,3.17,0.58618,1]
["GO:0032958","inositol phosphate biosynthetic process",12,1,1.42,0.78061,1,null,"GO:0051707","response to other organism",1590,324,295.09,0.80229,1,null,"GO:0042744","hydrogen peroxide catabolic process",24,4,4.07,0.59911,1,null,"GO:0034661","ncRNA catabolic process",22,6,4.36,0.58621,1]
["GO:0006574","valine catabolic process",12,1,1.42,0.78061,1,null,"GO:0051094","positive regulation of developmental process",101,19,18.74,0.8031,1,null,"GO:0010229","inflorescence development",24,4,4.07,0.59911,1,null,"GO:0051248","negative regulation of protein metabolic process",93,20,18.42,0.58622,1]
["GO:0014074","response to purine-containing compound",12,1,1.42,0.78061,1,null,"GO:0006367","transcription initiation at RNA polymerase II promoter",33,4,6.12,0.80362,1,null,"GO:0016126","sterol biosynthetic process",24,4,4.07,0.59911,1,null,"GO:1903409","reactive oxygen species biosynthetic process",23,6,4.55,0.58624,1]
["GO:0090158","endoplasmic reticulum membrane organization",12,1,1.42,0.78061,1,null,"GO:0071446","cellular response to salicylic acid stimulus",95,13,17.63,0.80417,1,null,"GO:2000652","regulation of secondary cell wall biogenesis",24,4,4.07,0.59911,1,null,"GO:0009900","dehiscence",14,4,2.77,0.58627,1]
["GO:0010050","vegetative phase change",12,1,1.42,0.78061,1,null,"GO:0044743","protein transmembrane import into intracellular organelle",46,12,8.54,0.80604,1,null,"GO:0010411","xyloglucan metabolic process",38,5,6.44,0.59952,1,null,"GO:0009156","ribonucleoside monophosphate biosynthetic process",35,8,6.93,0.58629,1]
["GO:0050665","hydrogen peroxide biosynthetic process",12,1,1.42,0.78061,1,null,"GO:0000096","sulfur amino acid metabolic process",50,12,9.28,0.80614,1,null,"GO:0048878","chemical homeostasis",356,93,60.35,0.60146,1,null,"GO:0090354","regulation of auxin metabolic process",15,4,2.97,0.58629,1]
["GO:0070076","histone lysine demethylation",12,1,1.42,0.78061,1,null,"GO:0019751","polyol metabolic process",47,11,8.72,0.8062,1,null,"GO:0051641","cellular localization",1100,186,186.47,0.60211,1,null,"GO:0047484","regulation of response to osmotic stress",36,8,7.13,0.58632,1]
["GO:0034765","regulation of monoatomic ion transmembrane transport",12,1,1.42,0.78061,1,null,"GO:0000041","transition metal ion transport",52,11,9.65,0.80632,1,null,"GO:0071398","cellular response to fatty acid",169,40,28.65,0.60343,1,null,"GO:0045834","positive regulation of lipid metabolic process",26,6,5.15,0.58632,1]
["GO:0006828","manganese ion transport",12,1,1.42,0.78061,1,null,"GO:0006575","cellular modified amino acid metabolic process",48,10,8.91,0.80635,1,null,"GO:0009267","cellular response to starvation",138,39,23.39,0.60368,1,null,"GO:0097035","regulation of membrane lipid distribution",17,4,3.37,0.58635,1]
["GO:0018022","peptidyl-lysine methylation",55,6,6.53,0.78063,1,null,"GO:0002833","positive regulation of response to biotic stimulus",71,14,13.18,0.80638,1,null,"GO:0009185","ribonucleoside diphosphate metabolic process",54,14,9.15,0.60434,1,null,"GO:0006730","one-carbon metabolic process",18,4,3.56,0.58638,1]
["GO:0140014","mitotic nuclear division",78,6,9.26,0.7811,1,null,"GO:0010104","regulation of ethylene-activated signaling pathway",23,5,4.27,0.8064,1,null,"GO:0051156","glucose 6-phosphate metabolic process",35,10,5.93,0.60445,1,null,"GO:0009685","gibberellin metabolic process",19,4,3.76,0.5864,1]
["GO:0051656","establishment of organelle localization",72,4,8.55,0.78133,1,null,"GO:0044265","cellular macromolecule catabolic process",535,99,99.29,0.80653,1,null,"GO:0019750","chloroplast localization",22,7,3.73,0.60456,1,null,"GO:0110053","regulation of actin filament organization",19,4,3.76,0.5864,1]
["GO:0006796","phosphate-containing compound metabolic process",1552,141,184.23,0.78187,1,null,"GO:0042176","regulation of protein catabolic process",42,7,7.79,0.80659,1,null,"GO:0018958","phenol-containing compound metabolic process",52,12,8.81,0.60457,1,null,"GO:0050777","negative regulation of immune response",25,4,4.95,0.58657,1]
["GO:0006644","phospholipid metabolic process",192,11,22.79,0.7826,1,null,"GO:0048528","post-embryonic root development",100,17,18.56,0.80669,1,null,"GO:0051606","detection of stimulus",59,13,10,0.6046,1,null,"GO:0001676","long-chain fatty acid metabolic process",41,7,8.12,0.58659,1]
["GO:0051649","establishment of localization in cell",692,63,82.15,0.78398,1,null,"GO:0051205","protein insertion into membrane",27,3,5.01,0.80675,1,null,"GO:0006835","dicarboxylic acid transport",15,5,2.54,0.60467,1,null,"GO:0007091","metaphase/anaphase transition of mitotic cell cycle",17,2,3.37,0.58663,1]
["GO:0009640","photomorphogenesis",106,11,12.58,0.7841,1,null,"GO:1901616","organic hydroxy compound catabolic process",22,2,4.08,0.80676,1,null,"GO:0032784","regulation of DNA-templated transcription elongation",31,7,5.25,0.60477,1,null,"GO:0030029","actin filament-based process",88,16,17.43,0.58664,1]
["GO:0006891","intra-Golgi vesicle-mediated transport",34,3,4.04,0.7857,1,null,"GO:0071103","DNA conformation change",27,2,5.01,0.80688,1,null,"GO:0009851","auxin biosynthetic process",31,6,5.25,0.60491,1,null,"GO:0006661","phosphatidylinositol biosynthetic process",47,7,9.31,0.58676,1]
["GO:0009451","RNA modification",354,50,42.02,0.79137,1,null,"GO:0009553","embryo sac development",114,21,21.16,0.80691,1,null,"GO:1902182","shoot apical meristem development",15,2,2.54,0.60509,1,null,"GO:0045143","homologous chromosome segregation",22,2,4.36,0.58677,1]
["GO:0010556","regulation of macromolecule biosynthetic process",1953,211,231.84,0.79547,1,null,"GO:0080134","regulation of response to stress",661,113,122.67,0.80779,1,null,"GO:0120251","hydrocarbon biosynthetic process",45,7,7.63,0.6051,1,null,"GO:0051345","positive regulation of hydrolase activity",35,4,6.93,0.58685,1]
["GO:0090407","organophosphate biosynthetic process",322,39,38.22,0.79588,1,null,"GO:0006793","phosphorus metabolic process",1365,187,253.33,0.80833,1,null,"GO:0006829","zinc ion transport",18,2,3.05,0.60516,1,null,"GO:0043087","regulation of GTPase activity",35,4,6.93,0.58685,1]
["GO:2000280","regulation of root development",43,5,5.1,0.79609,1,null,"GO:0022607","cellular component assembly",725,147,134.55,0.81234,1,null,"GO:0019932","second-messenger-mediated signaling",39,5,6.61,0.60524,1,null,"GO:0006499","N-terminal protein myristoylation",36,7,7.13,0.58807,1]
["GO:0006284","base-excision repair",24,2,2.85,0.79626,1,null,"GO:0072583","clathrin-dependent endocytosis",29,4,5.38,0.81346,1,null,"GO:0042435","indole-containing compound biosynthetic process",94,16,15.93,0.60545,1,null,"GO:0015031","protein transport",506,121,100.21,0.59325,1]
["GO:0051054","positive regulation of DNA metabolic process",24,2,2.85,0.79626,1,null,"GO:0000045","autophagosome assembly",29,4,5.38,0.81346,1,null,"GO:0046390","ribose phosphate biosynthetic process",125,18,21.19,0.60546,1,null,"GO:0051651","maintenance of location in cell",38,9,7.53,0.59431,1]
["GO:0098655","monoatomic cation transmembrane transport",145,12,17.21,0.7973,1,null,"GO:0090558","plant epidermis development",324,44,60.13,0.81823,1,null,"GO:0042325","regulation of phosphorylation",70,3,11.87,0.60624,1,null,"GO:0048468","cell development",298,60,59.02,0.59443,1]
["GO:0016311","dephosphorylation",196,13,23.27,0.7985,1,null,"GO:0042546","cell wall biogenesis",266,51,49.37,0.81846,1,null,"GO:0065009","regulation of molecular function",193,23,32.72,0.60637,1,null,"GO:0035194","RNA-mediated post-transcriptional gene silencing",41,9,8.12,0.59446,1]
["GO:0046686","response to cadmium ion",65,6,7.72,0.79914,1,null,"GO:0045489","pectin biosynthetic process",49,7,9.09,0.82439,1,null,"GO:0051052","regulation of DNA metabolic process",123,9,20.85,0.60666,1,null,"GO:0043067","regulation of programmed cell death",70,14,13.86,0.59465,1]
["GO:0010243","response to organonitrogen compound",159,13,18.87,0.79936,1,null,"GO:0045087","innate immune response",189,28,35.08,0.82472,1,null,"GO:0048285","organelle fission",220,18,37.29,0.60771,1,null,"GO:0010103","stomatal complex morphogenesis",15,3,2.97,0.59468,1]
["GO:0010090","trichome morphogenesis",64,8,7.6,0.80172,1,null,"GO:0055082","intracellular chemical homeostasis",158,36,29.32,0.82482,1,null,"GO:0035196","miRNA processing",29,6,4.92,0.60963,1,null,"GO:0010048","vernalization response",15,3,2.97,0.59468,1]
["GO:0009267","cellular response to starvation",138,12,16.38,0.80299,1,null,"GO:0045333","cellular respiration",122,24,22.64,0.82574,1,null,"GO:0055046","microgametogenesis",33,6,5.59,0.60981,1,null,"GO:0009697","salicylic acid biosynthetic process",15,3,2.97,0.59468,1]
["GO:0019748","secondary metabolic process",557,97,66.12,0.80586,1,null,"GO:0043085","positive regulation of catalytic activity",64,13,11.88,0.82578,1,null,"GO:0010143","cutin biosynthetic process",18,3,3.05,0.60992,1,null,"GO:0006144","purine nucleobase metabolic process",15,3,2.97,0.59468,1]
["GO:0060918","auxin transport",107,14,12.7,0.80636,1,null,"GO:0090481","pyrimidine nucleotide-sugar transmembrane transport",16,2,2.97,0.82614,1,null,"GO:0080092","regulation of pollen tube growth",18,3,3.05,0.60992,1,null,"GO:0009686","gibberellin biosynthetic process",15,3,2.97,0.59468,1]
["GO:0071470","cellular response to osmotic stress",50,7,5.94,0.8064,1,null,"GO:0015693","magnesium ion transport",16,2,2.97,0.82614,1,null,"GO:0006144","purine nucleobase metabolic process",18,3,3.05,0.60992,1,null,"GO:0006241","CTP biosynthetic process",15,3,2.97,0.59468,1]
["GO:0031537","regulation of anthocyanin metabolic process",27,3,3.21,0.80661,1,null,"GO:0070507","regulation of microtubule cytoskeleton organization",16,2,2.97,0.82614,1,null,"GO:0031408","oxylipin biosynthetic process",18,3,3.05,0.60992,1,null,"GO:0043928","exonucleolytic catabolism of deadenylated mRNA",15,3,2.97,0.59468,1]
["GO:0006596","polyamine biosynthetic process",13,1,1.54,0.80667,1,null,"GO:0030042","actin filament depolymerization",16,2,2.97,0.82614,1,null,"GO:0042762","regulation of sulfur metabolic process",28,4,4.75,0.6101,1,null,"GO:0015850","organic hydroxy compound transport",15,3,2.97,0.59468,1]
["GO:0071484","cellular response to light intensity",13,1,1.54,0.80667,1,null,"GO:0071248","cellular response to metal ion",16,2,2.97,0.82614,1,null,"GO:0042023","DNA endoreduplication",50,6,8.48,0.61053,1,null,"GO:0080163","regulation of protein serine/threonine phosphatase activity",15,3,2.97,0.59468,1]
["GO:0006560","proline metabolic process",13,1,1.54,0.80667,1,null,"GO:0015749","monosaccharide transmembrane transport",16,2,2.97,0.82614,1,null,"GO:0031328","positive regulation of cellular biosynthetic process",404,99,68.48,0.611,1,null,"GO:0018130","heterocycle biosynthetic process",2227,551,441.03,0.59581,1]
["GO:0048829","root cap development",13,1,1.54,0.80667,1,null,"GO:0016122","xanthophyll metabolic process",16,2,2.97,0.82614,1,null,"GO:2000377","regulation of reactive oxygen species metabolic process",56,14,9.49,0.61372,1,null,"GO:1901362","organic cyclic compound biosynthetic process",2415,584,478.26,0.59594,1]
["GO:0007020","microtubule nucleation",13,1,1.54,0.80667,1,null,"GO:0010337","regulation of salicylic acid metabolic process",16,2,2.97,0.82614,1,null,"GO:0051510","regulation of unidimensional cell growth",55,9,9.32,0.61546,1,null,"GO:0016310","phosphorylation",736,174,145.76,0.59727,1]
["GO:0035435","phosphate ion transmembrane transport",13,1,1.54,0.80667,1,null,"GO:0045727","positive regulation of translation",16,2,2.97,0.82614,1,null,"GO:0045944","positive regulation of transcription by RNA polymerase II",85,16,14.41,0.61686,1,null,"GO:0010033","response to organic substance",2951,701,584.41,0.60305,1]
["GO:0006656","phosphatidylcholine biosynthetic process",13,1,1.54,0.80667,1,null,"GO:0009827","plant-type cell wall modification",29,3,5.38,0.82638,1,null,"GO:0010556","regulation of macromolecule biosynthetic process",1953,416,331.06,0.61808,1,null,"GO:0000902","cell morphogenesis",411,90,81.39,0.60656,1]
["GO:0006312","mitotic recombination",13,1,1.54,0.80667,1,null,"GO:0006040","amino sugar metabolic process",23,3,4.27,0.82773,1,null,"GO:0000038","very long-chain fatty acid metabolic process",31,5,5.25,0.62277,1,null,"GO:0010182","sugar mediated signaling pathway",36,8,7.13,0.6069,1]
["GO:1901371","regulation of leaf morphogenesis",13,1,1.54,0.80667,1,null,"GO:0098655","monoatomic cation transmembrane transport",123,19,22.83,0.82825,1,null,"GO:0006810","transport",1968,375,333.61,0.62689,1,null,"GO:0045036","protein targeting to chloroplast",56,9,11.09,0.60789,1]
["GO:2000068","regulation of defense response to insect",13,1,1.54,0.80667,1,null,"GO:0022618","ribonucleoprotein complex assembly",120,15,22.27,0.82896,1,null,"GO:0046890","regulation of lipid biosynthetic process",62,14,10.51,0.62807,1,null,"GO:0000226","microtubule cytoskeleton organization",134,27,26.54,0.61008,1]
["GO:0006490","oligosaccharide-lipid intermediate biosynthetic process",13,1,1.54,0.80667,1,null,"GO:0007010","cytoskeleton organization",228,24,42.31,0.82911,1,null,"GO:0031047","RNA-mediated gene silencing",109,19,18.48,0.62868,1,null,"GO:0009853","photorespiration",42,8,8.32,0.61041,1]
["GO:0034314","Arp2/3 complex-mediated actin nucleation",13,1,1.54,0.80667,1,null,"GO:0009909","regulation of flower development",134,19,24.87,0.83867,1,null,"GO:0071241","cellular response to inorganic substance",28,5,4.75,0.62873,1,null,"GO:0006913","nucleocytoplasmic transport",108,42,21.39,0.61402,1]
["GO:0005986","sucrose biosynthetic process",13,1,1.54,0.80667,1,null,"GO:0043933","protein-containing complex organization",545,117,101.15,0.84045,1,null,"GO:0006566","threonine metabolic process",12,2,2.03,0.62879,1,null,"GO:0070646","protein modification by small protein removal",88,26,17.43,0.61654,1]
["GO:0010206","photosystem II repair",13,1,1.54,0.80667,1,null,"GO:0098754","detoxification",90,25,16.7,0.84141,1,null,"GO:0080142","regulation of salicylic acid biosynthetic process",12,2,2.03,0.62879,1,null,"GO:0010102","lateral root morphogenesis",49,15,9.7,0.61722,1]
["GO:0034427","nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'",13,1,1.54,0.80667,1,null,"GO:0008299","isoprenoid biosynthetic process",129,26,23.94,0.84215,1,null,"GO:0050665","hydrogen peroxide biosynthetic process",12,2,2.03,0.62879,1,null,"GO:0061025","membrane fusion",53,14,10.5,0.6176,1]
["GO:0006122","mitochondrial electron transport, ubiquinol to cytochrome c",13,1,1.54,0.80667,1,null,"GO:0050684","regulation of mRNA processing",34,7,6.31,0.84231,1,null,"GO:0048658","anther wall tapetum development",12,2,2.03,0.62879,1,null,"GO:0046149","pigment catabolic process",46,12,9.11,0.61772,1]
["GO:0051262","protein tetramerization",13,1,1.54,0.80667,1,null,"GO:0007031","peroxisome organization",38,7,7.05,0.8424,1,null,"GO:0032107","regulation of response to nutrient levels",12,2,2.03,0.62879,1,null,"GO:0070542","response to fatty acid",417,94,82.58,0.61773,1]
["GO:0046513","ceramide biosynthetic process",13,1,1.54,0.80667,1,null,"GO:0007030","Golgi organization",37,5,6.87,0.84248,1,null,"GO:1902288","regulation of defense response to oomycetes",12,2,2.03,0.62879,1,null,"GO:0002758","innate immune response-activating signaling pathway",29,8,5.74,0.61785,1]
["GO:0032365","intracellular lipid transport",13,1,1.54,0.80667,1,null,"GO:0043622","cortical microtubule organization",37,5,6.87,0.84248,1,null,"GO:0045332","phospholipid translocation",12,2,2.03,0.62879,1,null,"GO:0060966","regulation of gene silencing by RNA",20,6,3.96,0.6179,1]
["GO:0031145","anaphase-promoting complex-dependent catabolic process",13,1,1.54,0.80667,1,null,"GO:0006874","intracellular calcium ion homeostasis",37,5,6.87,0.84248,1,null,"GO:0034063","stress granule assembly",12,2,2.03,0.62879,1,null,"GO:0043484","regulation of RNA splicing",35,8,6.93,0.6181,1]
["GO:0015937","coenzyme A biosynthetic process",13,1,1.54,0.80667,1,null,"GO:0006885","regulation of pH",35,5,6.5,0.84257,1,null,"GO:0072530","purine-containing compound transmembrane transport",12,2,2.03,0.62879,1,null,"GO:1901658","glycosyl compound catabolic process",20,5,3.96,0.61811,1]
["GO:0034204","lipid translocation",13,1,1.54,0.80667,1,null,"GO:0052542","defense response by callose deposition",20,2,3.71,0.8426,1,null,"GO:0006022","aminoglycan metabolic process",12,2,2.03,0.62879,1,null,"GO:0051656","establishment of organelle localization",70,14,13.86,0.61829,1]
["GO:0019359","nicotinamide nucleotide biosynthetic process",13,1,1.54,0.80667,1,null,"GO:0000470","maturation of LSU-rRNA",27,2,5.01,0.84275,1,null,"GO:0010449","root meristem growth",45,5,7.63,0.62932,1,null,"GO:0006545","glycine biosynthetic process",10,2,1.98,0.61832,1]
["GO:0016132","brassinosteroid biosynthetic process",13,1,1.54,0.80667,1,null,"GO:0006811","monoatomic ion transport",219,35,40.64,0.84307,1,null,"GO:0140014","mitotic nuclear division",78,5,13.22,0.63046,1,null,"GO:0006388","tRNA splicing, via endonucleolytic cleavage and ligation",10,2,1.98,0.61832,1]
["GO:0010310","regulation of hydrogen peroxide metabolic process",13,1,1.54,0.80667,1,null,"GO:0007034","vacuolar transport",100,8,18.56,0.84364,1,null,"GO:0048827","phyllome development",733,139,124.25,0.63209,1,null,"GO:0033157","regulation of intracellular protein transport",10,2,1.98,0.61832,1]
["GO:0007265","Ras protein signal transduction",13,1,1.54,0.80667,1,null,"GO:0008610","lipid biosynthetic process",577,108,107.08,0.84461,1,null,"GO:0048024","regulation of mRNA splicing, via spliceosome",25,4,4.24,0.63294,1,null,"GO:0006491","N-glycan processing",10,2,1.98,0.61832,1]
["GO:0043254","regulation of protein-containing complex assembly",32,3,3.8,0.80671,1,null,"GO:0040029","epigenetic regulation of gene expression",133,21,24.68,0.84506,1,null,"GO:0006378","mRNA polyadenylation",25,4,4.24,0.63294,1,null,"GO:0071265","L-methionine biosynthetic process",10,2,1.98,0.61832,1]
["GO:0007129","homologous chromosome pairing at meiosis",27,2,3.21,0.80678,1,null,"GO:0032501","multicellular organismal process",3637,648,674.99,0.84656,1,null,"GO:0009294","DNA-mediated transformation",25,4,4.24,0.63294,1,null,"GO:0010215","cellulose microfibril organization",10,2,1.98,0.61832,1]
["GO:0031329","regulation of cellular catabolic process",127,8,15.08,0.80776,1,null,"GO:0051649","establishment of localization in cell",675,86,125.27,0.84718,1,null,"GO:0030433","ubiquitin-dependent ERAD pathway",44,7,7.46,0.63534,1,null,"GO:0010239","chloroplast mRNA processing",10,2,1.98,0.61832,1]
["GO:0009408","response to heat",346,36,41.07,0.80819,1,null,"GO:0015979","photosynthesis",193,41,35.82,0.84913,1,null,"GO:0006099","tricarboxylic acid cycle",44,7,7.46,0.63534,1,null,"GO:0016575","histone deacetylation",10,2,1.98,0.61832,1]
["GO:0009058","biosynthetic process",5822,837,691.11,0.81203,1,null,"GO:0080147","root hair cell development",81,14,15.03,0.84935,1,null,"GO:0051707","response to other organism",1988,497,337,0.63605,1,null,"GO:0010072","primary shoot apical meristem specification",10,2,1.98,0.61832,1]
["GO:0009867","jasmonic acid mediated signaling pathway",139,15,16.5,0.81296,1,null,"GO:0009960","endosperm development",24,3,4.45,0.84943,1,null,"GO:0006778","porphyrin-containing compound metabolic process",271,64,45.94,0.64598,1,null,"GO:0051211","anisotropic cell growth",10,2,1.98,0.61832,1]
["GO:0006282","regulation of DNA repair",25,2,2.97,0.81476,1,null,"GO:0098662","inorganic cation transmembrane transport",124,19,23.01,0.84992,1,null,"GO:0000160","phosphorelay signal transduction system",85,22,14.41,0.64615,1,null,"GO:0010833","telomere maintenance via telomere lengthening",10,2,1.98,0.61832,1]
["GO:0098662","inorganic cation transmembrane transport",146,12,17.33,0.81575,1,null,"GO:0042273","ribosomal large subunit biogenesis",74,7,13.73,0.85044,1,null,"GO:0031099","regeneration",19,3,3.22,0.6481,1,null,"GO:0030656","regulation of vitamin metabolic process",10,2,1.98,0.61832,1]
["GO:0071554","cell wall organization or biogenesis",750,128,89.03,0.81674,1,null,"GO:0090332","stomatal closure",43,7,7.98,0.85146,1,null,"GO:2000762","regulation of phenylpropanoid metabolic process",19,3,3.22,0.6481,1,null,"GO:1901989","positive regulation of cell cycle phase transition",10,2,1.98,0.61832,1]
["GO:0031324","negative regulation of cellular metabolic process",399,36,47.36,0.81715,1,null,"GO:0009785","blue light signaling pathway",17,2,3.16,0.85148,1,null,"GO:0043604","amide biosynthetic process",641,51,108.66,0.64999,1,null,"GO:0018026","peptidyl-lysine monomethylation",10,2,1.98,0.61832,1]
["GO:0009409","response to cold",561,60,66.59,0.81805,1,null,"GO:0048598","embryonic morphogenesis",17,2,3.16,0.85148,1,null,"GO:0048588","developmental cell growth",197,38,33.39,0.65039,1,null,"GO:0034052","positive regulation of plant-type hypersensitive response",10,2,1.98,0.61832,1]
["GO:0072330","monocarboxylic acid biosynthetic process",248,48,29.44,0.81876,1,null,"GO:0006415","translational termination",17,2,3.16,0.85148,1,null,"GO:0010089","xylem development",32,5,5.42,0.65202,1,null,"GO:0000184","nuclear-transcribed mRNA catabolic process, nonsense-mediated decay",10,2,1.98,0.61832,1]
["GO:1901615","organic hydroxy compound metabolic process",333,30,39.53,0.81981,1,null,"GO:0006085","acetyl-CoA biosynthetic process",17,2,3.16,0.85148,1,null,"GO:0007052","mitotic spindle organization",32,5,5.42,0.65202,1,null,"GO:1901002","positive regulation of response to salt stress",10,2,1.98,0.61832,1]
["GO:0070727","cellular macromolecule localization",718,75,85.23,0.82007,1,null,"GO:1902075","cellular response to salt",39,6,7.24,0.8515,1,null,"GO:0010468","regulation of gene expression",2957,576,501.26,0.65598,1,null,"GO:0009969","xyloglucan biosynthetic process",10,2,1.98,0.61832,1]
["GO:0010102","lateral root morphogenesis",63,9,7.48,0.82929,1,null,"GO:0061157","mRNA destabilization",50,5,9.28,0.85197,1,null,"GO:2001141","regulation of RNA biosynthetic process",1746,382,295.97,0.65856,1,null,"GO:0002252","immune effector process",10,2,1.98,0.61832,1]
["GO:0002238","response to molecule of fungal origin",14,1,1.66,0.82964,1,null,"GO:0006417","regulation of translation",114,12,21.16,0.85274,1,null,"GO:0006508","proteolysis",666,129,112.9,0.65883,1,null,"GO:0007346","regulation of mitotic cell cycle",50,9,9.9,0.61851,1]
["GO:0000054","ribosomal subunit export from nucleus",14,1,1.66,0.82964,1,null,"GO:0042752","regulation of circadian rhythm",55,9,10.21,0.85305,1,null,"GO:0048544","recognition of pollen",38,8,6.44,0.66431,1,null,"GO:0007017","microtubule-based process",165,31,32.68,0.61867,1]
["GO:0006303","double-strand break repair via nonhomologous end joining",14,1,1.66,0.82964,1,null,"GO:0002229","defense response to oomycetes",31,4,5.75,0.85317,1,null,"GO:0080147","root hair cell development",98,17,16.61,0.66464,1,null,"GO:0007030","Golgi organization",37,7,7.33,0.61911,1]
["GO:0005992","trehalose biosynthetic process",14,1,1.66,0.82964,1,null,"GO:0051225","spindle assembly",31,4,5.75,0.85317,1,null,"GO:0009593","detection of chemical stimulus",26,4,4.41,0.66487,1,null,"GO:1901659","glycosyl compound biosynthetic process",60,8,11.88,0.61912,1]
["GO:0072348","sulfur compound transport",14,1,1.66,0.82964,1,null,"GO:0051252","regulation of RNA metabolic process",1670,268,309.93,0.85399,1,null,"GO:0006334","nucleosome assembly",26,4,4.41,0.66487,1,null,"GO:0010016","shoot system morphogenesis",167,39,33.07,0.61951,1]
["GO:0006493","protein O-linked glycosylation",14,1,1.66,0.82964,1,null,"GO:0009908","flower development",451,68,83.7,0.85404,1,null,"GO:0006499","N-terminal protein myristoylation",39,6,6.61,0.66854,1,null,"GO:0009057","macromolecule catabolic process",734,170,145.36,0.6201,1]
["GO:0010225","response to UV-C",14,1,1.66,0.82964,1,null,"GO:0044249","cellular biosynthetic process",4106,683,762.03,0.85483,1,null,"GO:0019725","cellular homeostasis",230,60,38.99,0.66902,1,null,"GO:0045814","negative regulation of gene expression, epigenetic",52,13,10.3,0.62041,1]
["GO:0051026","chiasma assembly",14,1,1.66,0.82964,1,null,"GO:0071669","plant-type cell wall organization or biogenesis",334,56,61.99,0.85512,1,null,"GO:0030001","metal ion transport",184,39,31.19,0.67088,1,null,"GO:0010089","xylem development",21,4,4.16,0.62125,1]
["GO:0046417","chorismate metabolic process",14,1,1.66,0.82964,1,null,"GO:1901135","carbohydrate derivative metabolic process",711,116,131.95,0.85539,1,null,"GO:0046942","carboxylic acid transport",99,23,16.78,0.67111,1,null,"GO:0060627","regulation of vesicle-mediated transport",21,4,4.16,0.62125,1]
["GO:0010332","response to gamma radiation",14,1,1.66,0.82964,1,null,"GO:0023052","signaling",1631,278,302.7,0.8556,1,null,"GO:0006892","post-Golgi vesicle-mediated transport",38,12,6.44,0.6712,1,null,"GO:0048544","recognition of pollen",33,6,6.54,0.62136,1]
["GO:0048015","phosphatidylinositol-mediated signaling",14,1,1.66,0.82964,1,null,"GO:0051246","regulation of protein metabolic process",308,39,57.16,0.8567,1,null,"GO:0006457","protein folding",174,33,29.5,0.67124,1,null,"GO:0015693","magnesium ion transport",16,3,3.17,0.64099,1]
["GO:0007292","female gamete generation",14,1,1.66,0.82964,1,null,"GO:2000241","regulation of reproductive process",470,72,87.23,0.85711,1,null,"GO:0030258","lipid modification",86,19,14.58,0.67136,1,null,"GO:0052324","plant-type cell wall cellulose biosynthetic process",16,3,3.17,0.64099,1]
["GO:0080186","developmental vegetative growth",14,1,1.66,0.82964,1,null,"GO:0043161","proteasome-mediated ubiquitin-dependent protein catabolic process",203,34,37.67,0.85845,1,null,"GO:1902930","regulation of alcohol biosynthetic process",22,7,3.73,0.67152,1,null,"GO:0030307","positive regulation of cell growth",16,3,3.17,0.64099,1]
["GO:1900055","regulation of leaf senescence",49,5,5.82,0.82966,1,null,"GO:0060560","developmental growth involved in morphogenesis",364,66,67.55,0.85898,1,null,"GO:0019852","L-ascorbic acid metabolic process",21,6,3.56,0.67163,1,null,"GO:0015749","monosaccharide transmembrane transport",16,3,3.17,0.64099,1]
["GO:0030865","cortical cytoskeleton organization",56,3,6.65,0.83011,1,null,"GO:0009646","response to absence of light",38,5,7.05,0.85909,1,null,"GO:0034762","regulation of transmembrane transport",18,5,3.05,0.6717,1,null,"GO:0008360","regulation of cell shape",16,3,3.17,0.64099,1]
["GO:0006793","phosphorus metabolic process",1600,145,189.93,0.83022,1,null,"GO:0007033","vacuole organization",69,9,12.81,0.8595,1,null,"GO:0006354","DNA-templated transcription elongation",47,9,7.97,0.67183,1,null,"GO:0007275","multicellular organism development",3386,798,670.56,0.64101,1]
["GO:0010183","pollen tube guidance",26,2,3.09,0.83173,1,null,"GO:1901605","alpha-amino acid metabolic process",292,64,54.19,0.8599,1,null,"GO:1903313","positive regulation of mRNA metabolic process",59,11,10,0.67183,1,null,"GO:0010214","seed coat development",37,6,7.33,0.64128,1]
["GO:0051592","response to calcium ion",26,2,3.09,0.83173,1,null,"GO:0007623","circadian rhythm",131,20,24.31,0.86106,1,null,"GO:0006109","regulation of carbohydrate metabolic process",75,13,12.71,0.67193,1,null,"GO:0071483","cellular response to blue light",33,5,6.54,0.64133,1]
["GO:0042538","hyperosmotic salinity response",58,5,6.89,0.83389,1,null,"GO:0006996","organelle organization",1268,179,235.33,0.86558,1,null,"GO:0006641","triglyceride metabolic process",22,4,3.73,0.67193,1,null,"GO:0009664","plant-type cell wall organization",107,20,21.19,0.64301,1]
["GO:0009642","response to light intensity",345,37,40.95,0.83644,1,null,"GO:0000122","negative regulation of transcription by RNA polymerase II",25,3,4.64,0.86871,1,null,"GO:0043244","regulation of protein-containing complex disassembly",17,3,2.88,0.67195,1,null,"GO:0010043","response to zinc ion",38,7,7.53,0.64882,1]
["GO:0009266","response to temperature stimulus",1142,121,135.56,0.84007,1,null,"GO:0051510","regulation of unidimensional cell growth",54,12,10.02,0.86939,1,null,"GO:0048359","mucilage metabolic process involved in seed coat development",22,3,3.73,0.67207,1,null,"GO:0051239","regulation of multicellular organismal process",564,152,111.69,0.65284,1]
["GO:0006950","response to stress",4574,451,542.97,0.8411,1,null,"GO:0032103","positive regulation of response to external stimulus",73,14,13.55,0.87159,1,null,"GO:0072527","pyrimidine-containing compound metabolic process",52,8,8.81,0.67208,1,null,"GO:0009725","response to hormone",1785,449,353.5,0.65287,1]
["GO:0006721","terpenoid metabolic process",203,19,24.1,0.84617,1,null,"GO:1901658","glycosyl compound catabolic process",20,3,3.71,0.87171,1,null,"GO:0016075","rRNA catabolic process",18,2,3.05,0.67211,1,null,"GO:0006351","DNA-templated transcription",1611,421,319.04,0.65337,1]
["GO:0033554","cellular response to stress",1112,150,132,0.84688,1,null,"GO:0071491","cellular response to red light",10,1,1.86,0.87173,1,null,"GO:0034661","ncRNA catabolic process",24,3,4.07,0.67212,1,null,"GO:0006793","phosphorus metabolic process",1365,323,270.32,0.65715,1]
["GO:1901264","carbohydrate derivative transport",48,6,5.7,0.84698,1,null,"GO:0009901","anther dehiscence",10,1,1.86,0.87173,1,null,"GO:0018345","protein palmitoylation",25,3,4.24,0.67214,1,null,"GO:0042631","cellular response to water deprivation",22,4,4.36,0.65979,1]
["GO:0010193","response to ozone",27,2,3.21,0.84729,1,null,"GO:0009757","hexose mediated signaling",10,1,1.86,0.87173,1,null,"GO:0030705","cytoskeleton-dependent intracellular transport",22,2,3.73,0.67221,1,null,"GO:0019915","lipid storage",22,4,4.36,0.65979,1]
["GO:2000031","regulation of salicylic acid mediated signaling pathway",27,2,3.21,0.84729,1,null,"GO:0032776","DNA methylation on cytosine",10,1,1.86,0.87173,1,null,"GO:0009247","glycolipid biosynthetic process",47,6,7.97,0.67224,1,null,"GO:2000031","regulation of salicylic acid mediated signaling pathway",22,4,4.36,0.65979,1]
["GO:0010207","photosystem II assembly",27,2,3.21,0.84729,1,null,"GO:0006312","mitotic recombination",10,1,1.86,0.87173,1,null,"GO:0019220","regulation of phosphate metabolic process",107,9,18.14,0.67323,1,null,"GO:0016125","sterol metabolic process",41,5,8.12,0.66059,1]
["GO:0010363","regulation of plant-type hypersensitive response",27,2,3.21,0.84729,1,null,"GO:0010965","regulation of mitotic sister chromatid separation",10,1,1.86,0.87173,1,null,"GO:0006656","phosphatidylcholine biosynthetic process",13,2,2.2,0.6735,1,null,"GO:0051128","regulation of cellular component organization",241,48,47.73,0.66075,1]
["GO:0045165","cell fate commitment",67,17,7.95,0.84841,1,null,"GO:1900368","regulation of post-transcriptional gene silencing by RNA",10,1,1.86,0.87173,1,null,"GO:0080163","regulation of protein serine/threonine phosphatase activity",13,2,2.2,0.6735,1,null,"GO:0010638","positive regulation of organelle organization",33,6,6.54,0.66103,1]
["GO:0016114","terpenoid biosynthetic process",133,14,15.79,0.84905,1,null,"GO:0051211","anisotropic cell growth",10,1,1.86,0.87173,1,null,"GO:0051262","protein tetramerization",13,2,2.2,0.6735,1,null,"GO:0016072","rRNA metabolic process",244,79,48.32,0.66395,1]
["GO:0046283","anthocyanin-containing compound metabolic process",61,10,7.24,0.84935,1,null,"GO:1901989","positive regulation of cell cycle phase transition",10,1,1.86,0.87173,1,null,"GO:0046513","ceramide biosynthetic process",13,2,2.2,0.6735,1,null,"GO:0019725","cellular homeostasis",198,48,39.21,0.66709,1]
["GO:0006801","superoxide metabolic process",15,1,1.78,0.84988,1,null,"GO:0001934","positive regulation of protein phosphorylation",10,1,1.86,0.87173,1,null,"GO:0010586","miRNA metabolic process",13,2,2.2,0.6735,1,null,"GO:0009860","pollen tube growth",114,20,22.58,0.66711,1]
["GO:0000077","DNA damage checkpoint signaling",15,1,1.78,0.84988,1,null,"GO:0000184","nuclear-transcribed mRNA catabolic process, nonsense-mediated decay",10,1,1.86,0.87173,1,null,"GO:0048639","positive regulation of developmental growth",13,2,2.2,0.6735,1,null,"GO:0016050","vesicle organization",99,28,19.61,0.66716,1]
["GO:0010152","pollen maturation",15,1,1.78,0.84988,1,null,"GO:0031023","microtubule organizing center organization",10,1,1.86,0.87173,1,null,"GO:0019359","nicotinamide nucleotide biosynthetic process",13,2,2.2,0.6735,1,null,"GO:0009185","ribonucleoside diphosphate metabolic process",45,16,8.91,0.66734,1]
["GO:0010189","vitamin E biosynthetic process",15,1,1.78,0.84988,1,null,"GO:0001709","cell fate determination",10,1,1.86,0.87173,1,null,"GO:0042304","regulation of fatty acid biosynthetic process",13,2,2.2,0.6735,1,null,"GO:0048878","chemical homeostasis",299,81,59.21,0.6676,1]
["GO:0009704","de-etiolation",15,1,1.78,0.84988,1,null,"GO:0033356","UDP-L-arabinose metabolic process",10,1,1.86,0.87173,1,null,"GO:0006122","mitochondrial electron transport, ubiquinol to cytochrome c",13,2,2.2,0.6735,1,null,"GO:0033500","carbohydrate homeostasis",24,9,4.75,0.66774,1]
["GO:0051177","meiotic sister chromatid cohesion",15,1,1.78,0.84988,1,null,"GO:0046128","purine ribonucleoside metabolic process",10,1,1.86,0.87173,1,null,"GO:0015937","coenzyme A biosynthetic process",13,2,2.2,0.6735,1,null,"GO:0046390","ribose phosphate biosynthetic process",117,26,23.17,0.66794,1]
["GO:0010048","vernalization response",15,1,1.78,0.84988,1,null,"GO:1901879","regulation of protein depolymerization",10,1,1.86,0.87173,1,null,"GO:0010315","auxin export across the plasma membrane",13,2,2.2,0.6735,1,null,"GO:0071478","cellular response to radiation",154,33,30.5,0.66799,1]
["GO:0017004","cytochrome complex assembly",15,1,1.78,0.84988,1,null,"GO:0010102","lateral root morphogenesis",49,8,9.09,0.87175,1,null,"GO:0006782","protoporphyrinogen IX biosynthetic process",13,2,2.2,0.6735,1,null,"GO:0031324","negative regulation of cellular metabolic process",351,89,69.51,0.66806,1]
["GO:0071027","nuclear RNA surveillance",15,1,1.78,0.84988,1,null,"GO:0010212","response to ionizing radiation",21,2,3.9,0.87184,1,null,"GO:0006863","purine nucleobase transport",13,2,2.2,0.6735,1,null,"GO:0032784","regulation of DNA-templated transcription elongation",33,8,6.54,0.66813,1]
["GO:0019853","L-ascorbic acid biosynthetic process",15,1,1.78,0.84988,1,null,"GO:0006084","acetyl-CoA metabolic process",27,3,5.01,0.87185,1,null,"GO:0045995","regulation of embryonic development",13,2,2.2,0.6735,1,null,"GO:0044273","sulfur compound catabolic process",15,4,2.97,0.66819,1]
["GO:0046688","response to copper ion",15,1,1.78,0.84988,1,null,"GO:0016570","histone modification",134,17,24.87,0.87248,1,null,"GO:0007584","response to nutrient",13,2,2.2,0.6735,1,null,"GO:1902903","regulation of supramolecular fiber organization",27,6,5.35,0.66825,1]
["GO:1900425","negative regulation of defense response to bacterium",15,1,1.78,0.84988,1,null,"GO:0006913","nucleocytoplasmic transport",108,11,20.04,0.8726,1,null,"GO:0070085","glycosylation",134,6,22.72,0.67428,1,null,"GO:0009808","lignin metabolic process",33,6,6.54,0.66841,1]
["GO:0016122","xanthophyll metabolic process",15,1,1.78,0.84988,1,null,"GO:0010027","thylakoid membrane organization",52,7,9.65,0.87281,1,null,"GO:0006996","organelle organization",1416,185,240.03,0.67769,1,null,"GO:0042325","regulation of phosphorylation",45,8,8.91,0.66847,1]
["GO:0043928","exonucleolytic catabolism of deadenylated mRNA",15,1,1.78,0.84988,1,null,"GO:0008380","RNA splicing",297,59,55.12,0.87288,1,null,"GO:0033014","tetrapyrrole biosynthetic process",141,26,23.9,0.67894,1,null,"GO:0043647","inositol phosphate metabolic process",17,2,3.37,0.66853,1]
["GO:0015706","nitrate transmembrane transport",15,1,1.78,0.84988,1,null,"GO:0051173","positive regulation of nitrogen compound metabolic process",562,84,104.3,0.87307,1,null,"GO:0034660","ncRNA metabolic process",483,31,81.88,0.67911,1,null,"GO:0061136","regulation of proteasomal protein catabolic process",29,4,5.74,0.66858,1]
["GO:0015851","nucleobase transport",15,1,1.78,0.84988,1,null,"GO:0031349","positive regulation of defense response",81,15,15.03,0.87323,1,null,"GO:0010628","positive regulation of gene expression",64,12,10.85,0.6825,1,null,"GO:0045859","regulation of protein kinase activity",27,2,5.35,0.66881,1]
["GO:0048766","root hair initiation",15,1,1.78,0.84988,1,null,"GO:0009944","polarity specification of adaxial/abaxial axis",18,2,3.34,0.87341,1,null,"GO:0015693","magnesium ion transport",20,3,3.39,0.68354,1,null,"GO:0051052","regulation of DNA metabolic process",103,17,20.4,0.66882,1]
["GO:0006857","oligopeptide transport",15,1,1.78,0.84988,1,null,"GO:0009638","phototropism",18,2,3.34,0.87341,1,null,"GO:0010233","phloem transport",20,3,3.39,0.68354,1,null,"GO:0008652","amino acid biosynthetic process",159,28,31.49,0.66883,1]
["GO:0036503","ERAD pathway",59,6,7,0.84991,1,null,"GO:0000165","MAPK cascade",18,2,3.34,0.87341,1,null,"GO:0030042","actin filament depolymerization",20,3,3.39,0.68354,1,null,"GO:0035825","homologous recombination",48,4,9.51,0.66911,1]
["GO:0007264","small GTPase mediated signal transduction",28,2,3.32,0.84996,1,null,"GO:0043200","response to amino acid",18,2,3.34,0.87341,1,null,"GO:0072523","purine-containing compound catabolic process",20,3,3.39,0.68354,1,null,"GO:0015979","photosynthesis",193,28,38.22,0.66961,1]
["GO:0009687","abscisic acid metabolic process",39,3,4.63,0.85,1,null,"GO:0009959","negative gravitropism",18,2,3.34,0.87341,1,null,"GO:0009962","regulation of flavonoid biosynthetic process",34,5,5.76,0.68363,1,null,"GO:0060918","auxin transport",93,29,18.42,0.66995,1]
["GO:0018205","peptidyl-lysine modification",107,10,12.7,0.85016,1,null,"GO:0048653","anther development",40,5,7.42,0.87357,1,null,"GO:0006164","purine nucleotide biosynthetic process",117,18,19.83,0.68389,1,null,"GO:0016051","carbohydrate biosynthetic process",284,64,56.24,0.67051,1]
["GO:0006816","calcium ion transport",59,4,7,0.85021,1,null,"GO:0015711","organic anion transport",105,16,19.49,0.87373,1,null,"GO:0000271","polysaccharide biosynthetic process",229,29,38.82,0.68586,1,null,"GO:0016043","cellular component organization",2183,419,432.32,0.67053,1]
["GO:0015031","protein transport",516,54,61.25,0.85062,1,null,"GO:0006487","protein N-linked glycosylation",39,5,7.24,0.87421,1,null,"GO:0009725","response to hormone",2227,614,377.51,0.68919,1,null,"GO:0006405","RNA export from nucleus",46,15,9.11,0.67092,1]
["GO:0006091","generation of precursor metabolites and energy",395,36,46.89,0.85141,1,null,"GO:0009631","cold acclimation",39,5,7.24,0.87421,1,null,"GO:0007275","multicellular organism development",4059,666,688.06,0.69042,1,null,"GO:0016441","post-transcriptional gene silencing",58,14,11.49,0.6716,1]
["GO:0048827","phyllome development",733,76,87.01,0.85687,1,null,"GO:0010073","meristem maintenance",144,16,26.72,0.88172,1,null,"GO:0010043","response to zinc ion",40,6,6.78,0.69327,1,null,"GO:0006972","hyperosmotic response",57,13,11.29,0.67176,1]
["GO:0048584","positive regulation of response to stimulus",239,28,28.37,0.85741,1,null,"GO:0009968","negative regulation of signal transduction",88,17,16.33,0.88538,1,null,"GO:0070887","cellular response to chemical stimulus",1886,518,319.71,0.69643,1,null,"GO:0010941","regulation of cell death",90,19,17.82,0.67187,1]
["GO:0006612","protein targeting to membrane",68,7,8.07,0.85757,1,null,"GO:0009226","nucleotide-sugar biosynthetic process",33,4,6.12,0.88545,1,null,"GO:0019438","aromatic compound biosynthetic process",2790,531,472.95,0.70226,1,null,"GO:0098876","vesicle-mediated transport to the plasma membrane",30,7,5.94,0.6719,1]
["GO:0016573","histone acetylation",39,3,4.63,0.85771,1,null,"GO:0006997","nucleus organization",50,9,9.28,0.88553,1,null,"GO:0007166","cell surface receptor signaling pathway",34,5,5.76,0.70602,1,null,"GO:0009694","jasmonic acid metabolic process",31,6,6.14,0.67214,1]
["GO:0050821","protein stabilization",28,2,3.32,0.86153,1,null,"GO:0009825","multidimensional cell growth",26,3,4.83,0.88578,1,null,"GO:0006720","isoprenoid metabolic process",244,55,41.36,0.71097,1,null,"GO:0000289","nuclear-transcribed mRNA poly(A) tail shortening",11,2,2.18,0.67215,1]
["GO:0009057","macromolecule catabolic process",791,67,93.9,0.86388,1,null,"GO:0006887","exocytosis",39,5,7.24,0.88585,1,null,"GO:0051172","negative regulation of nitrogen compound metabolic process",343,73,58.14,0.71253,1,null,"GO:0071484","cellular response to light intensity",11,2,2.18,0.67215,1]
["GO:0099402","plant organ development",1737,226,206.19,0.86448,1,null,"GO:0009630","gravitropism",65,6,12.06,0.88647,1,null,"GO:0000919","cell plate assembly",14,2,2.37,0.71372,1,null,"GO:0006566","threonine metabolic process",11,2,2.18,0.67215,1]
["GO:0010383","cell wall polysaccharide metabolic process",127,21,15.08,0.86675,1,null,"GO:2000026","regulation of multicellular organismal development",432,63,80.17,0.88676,1,null,"GO:0031540","regulation of anthocyanin biosynthetic process",14,2,2.37,0.71372,1,null,"GO:0014074","response to purine-containing compound",11,2,2.18,0.67215,1]
["GO:0048440","carpel development",61,10,7.24,0.8672,1,null,"GO:0048573","photoperiodism, flowering",185,25,34.33,0.88692,1,null,"GO:0097501","stress response to metal ion",14,2,2.37,0.71372,1,null,"GO:0035435","phosphate ion transmembrane transport",11,2,2.18,0.67215,1]
["GO:0001510","RNA methylation",62,10,7.36,0.86722,1,null,"GO:0006888","endoplasmic reticulum to Golgi vesicle-mediated transport",87,10,16.15,0.88715,1,null,"GO:0098656","monoatomic anion transmembrane transport",14,2,2.37,0.71372,1,null,"GO:0007009","plasma membrane organization",11,2,2.18,0.67215,1]
["GO:0045926","negative regulation of growth",26,4,3.09,0.86746,1,null,"GO:0016311","dephosphorylation",182,28,33.78,0.88861,1,null,"GO:2000033","regulation of seed dormancy process",14,2,2.37,0.71372,1,null,"GO:0090158","endoplasmic reticulum membrane organization",11,2,2.18,0.67215,1]
["GO:0000723","telomere maintenance",30,4,3.56,0.86753,1,null,"GO:0007093","mitotic cell cycle checkpoint signaling",19,2,3.53,0.89232,1,null,"GO:0051781","positive regulation of cell division",14,2,2.37,0.71372,1,null,"GO:0009690","cytokinin metabolic process",11,2,2.18,0.67215,1]
["GO:0009932","cell tip growth",135,16,16.03,0.86759,1,null,"GO:1905421","regulation of plant organ morphogenesis",30,3,5.57,0.89246,1,null,"GO:0006493","protein O-linked glycosylation",14,2,2.37,0.71372,1,null,"GO:0048441","petal development",11,2,2.18,0.67215,1]
["GO:0140115","export across plasma membrane",61,7,7.24,0.86762,1,null,"GO:0001708","cell fate specification",30,3,5.57,0.89246,1,null,"GO:0010540","basipetal auxin transport",14,2,2.37,0.71372,1,null,"GO:0048199","vesicle targeting, to, from or within Golgi",11,2,2.18,0.67215,1]
["GO:0019432","triglyceride biosynthetic process",16,1,1.9,0.86771,1,null,"GO:2000280","regulation of root development",33,3,6.12,0.89253,1,null,"GO:0002238","response to molecule of fungal origin",14,2,2.37,0.71372,1,null,"GO:0006271","DNA strand elongation involved in DNA replication",11,2,2.18,0.67215,1]
["GO:0009901","anther dehiscence",16,1,1.9,0.86771,1,null,"GO:0048443","stamen development",59,7,10.95,0.89264,1,null,"GO:0006120","mitochondrial electron transport, NADH to ubiquinone",14,2,2.37,0.71372,1,null,"GO:0006020","inositol metabolic process",11,2,2.18,0.67215,1]
["GO:0007064","mitotic sister chromatid cohesion",16,1,1.9,0.86771,1,null,"GO:0070727","cellular macromolecule localization",694,88,128.8,0.8927,1,null,"GO:0019646","aerobic electron transport chain",41,6,6.95,0.71383,1,null,"GO:0016998","cell wall macromolecule catabolic process",11,2,2.18,0.67215,1]
["GO:0019253","reductive pentose-phosphate cycle",16,1,1.9,0.86771,1,null,"GO:0045324","late endosome to vacuole transport",44,3,8.17,0.8928,1,null,"GO:0010112","regulation of systemic acquired resistance",21,3,3.56,0.71624,1,null,"GO:0000105","histidine biosynthetic process",11,2,2.18,0.67215,1]
["GO:0046519","sphingoid metabolic process",16,1,1.9,0.86771,1,null,"GO:0010564","regulation of cell cycle process",104,12,19.3,0.89308,1,null,"GO:0008361","regulation of cell size",21,3,3.56,0.71624,1,null,"GO:0000038","very long-chain fatty acid metabolic process",23,4,4.55,0.67222,1]
["GO:0051128","regulation of cellular component organization",282,38,33.48,0.86782,1,null,"GO:0048580","regulation of post-embryonic development",352,50,65.33,0.89379,1,null,"GO:0032436","positive regulation of proteasomal ubiquitin-dependent protein catabolic process",21,3,3.56,0.71624,1,null,"GO:0006672","ceramide metabolic process",24,4,4.75,0.67226,1]
["GO:0042886","amide transport",31,2,3.68,0.86782,1,null,"GO:0009826","unidimensional cell growth",292,53,54.19,0.89427,1,null,"GO:0033043","regulation of organelle organization",144,10,24.41,0.71644,1,null,"GO:0001522","pseudouridine synthesis",22,3,4.36,0.67239,1]
["GO:0009060","aerobic respiration",106,10,12.58,0.86795,1,null,"GO:0009932","cell tip growth",138,31,25.61,0.89493,1,null,"GO:0010027","thylakoid membrane organization",54,8,9.15,0.71697,1,null,"GO:0040034","regulation of development, heterochronic",38,6,7.53,0.67242,1]
["GO:0008654","phospholipid biosynthetic process",133,6,15.79,0.86896,1,null,"GO:0048878","chemical homeostasis",299,60,55.49,0.89501,1,null,"GO:0006325","chromatin organization",277,41,46.96,0.71882,1,null,"GO:0048467","gynoecium development",64,11,12.67,0.67245,1]
["GO:0016071","mRNA metabolic process",493,37,58.52,0.87065,1,null,"GO:1903409","reactive oxygen species biosynthetic process",23,5,4.27,0.89538,1,null,"GO:0018130","heterocycle biosynthetic process",2664,522,451.59,0.72044,1,null,"GO:0009932","cell tip growth",138,25,27.33,0.67259,1]
["GO:0030244","cellulose biosynthetic process",58,5,6.89,0.87463,1,null,"GO:0001522","pseudouridine synthesis",22,4,4.08,0.89546,1,null,"GO:0034470","ncRNA processing",402,26,68.15,0.72189,1,null,"GO:1901615","organic hydroxy compound metabolic process",270,56,53.47,0.67515,1]
["GO:0071446","cellular response to salicylic acid stimulus",119,9,14.13,0.87523,1,null,"GO:0043254","regulation of protein-containing complex assembly",30,5,5.57,0.8955,1,null,"GO:0019941","modification-dependent protein catabolic process",408,88,69.16,0.72499,1,null,"GO:0009809","lignin biosynthetic process",28,5,5.55,0.67614,1]
["GO:0045892","negative regulation of DNA-templated transcription",171,16,20.3,0.87529,1,null,"GO:0046653","tetrahydrofolate metabolic process",25,4,4.64,0.89551,1,null,"GO:0009606","tropism",149,28,25.26,0.72553,1,null,"GO:0006888","endoplasmic reticulum to Golgi vesicle-mediated transport",87,18,17.23,0.67688,1]
["GO:0045893","positive regulation of DNA-templated transcription",330,28,39.17,0.87799,1,null,"GO:0009231","riboflavin biosynthetic process",11,1,2.04,0.89555,1,null,"GO:0046173","polyol biosynthetic process",32,14,5.42,0.72642,1,null,"GO:0009740","gibberellic acid mediated signaling pathway",36,8,7.13,0.68312,1]
["GO:0006486","protein glycosylation",128,10,15.19,0.87955,1,null,"GO:0006566","threonine metabolic process",11,1,2.04,0.89555,1,null,"GO:0060548","negative regulation of cell death",37,12,6.27,0.7268,1,null,"GO:0034308","primary alcohol metabolic process",17,3,3.37,0.68343,1]
["GO:0019752","carboxylic acid metabolic process",1365,182,162.04,0.8811,1,null,"GO:0009051","pentose-phosphate shunt, oxidative branch",11,1,2.04,0.89555,1,null,"GO:0032509","endosome transport via multivesicular body sorting pathway",32,9,5.42,0.72709,1,null,"GO:0006397","mRNA processing",338,73,66.94,0.68732,1]
["GO:0016036","cellular response to phosphate starvation",63,5,7.48,0.88254,1,null,"GO:0006570","tyrosine metabolic process",11,1,2.04,0.89555,1,null,"GO:0009251","glucan catabolic process",24,7,4.07,0.72718,1,null,"GO:0010051","xylem and phloem pattern formation",56,12,11.09,0.69015,1]
["GO:2000028","regulation of photoperiodism, flowering",89,6,10.56,0.88309,1,null,"GO:0014074","response to purine-containing compound",11,1,2.04,0.89555,1,null,"GO:0051503","adenine nucleotide transport",18,4,3.05,0.72744,1,null,"GO:0071695","anatomical structure maturation",258,51,51.09,0.69048,1]
["GO:0072329","monocarboxylic acid catabolic process",63,8,7.48,0.88323,1,null,"GO:0007088","regulation of mitotic nuclear division",11,1,2.04,0.89555,1,null,"GO:0009066","aspartate family amino acid metabolic process",60,11,10.17,0.72746,1,null,"GO:0042180","cellular ketone metabolic process",152,37,30.1,0.69346,1]
["GO:0009902","chloroplast relocation",17,1,2.02,0.88343,1,null,"GO:0035435","phosphate ion transmembrane transport",11,1,2.04,0.89555,1,null,"GO:0047484","regulation of response to osmotic stress",43,8,7.29,0.72748,1,null,"GO:0015994","chlorophyll metabolic process",180,42,35.65,0.69504,1]
["GO:0046246","terpene biosynthetic process",17,1,2.02,0.88343,1,null,"GO:0010158","abaxial cell fate specification",11,1,2.04,0.89555,1,null,"GO:2000034","regulation of seed maturation",21,3,3.56,0.72765,1,null,"GO:0006282","regulation of DNA repair",23,4,4.55,0.69558,1]
["GO:0051347","positive regulation of transferase activity",17,1,2.02,0.88343,1,null,"GO:0007009","plasma membrane organization",11,1,2.04,0.89555,1,null,"GO:0071216","cellular response to biotic stimulus",18,2,3.05,0.72771,1,null,"GO:0001558","regulation of cell growth",87,16,17.23,0.69577,1]
["GO:0006415","translational termination",17,1,2.02,0.88343,1,null,"GO:0018342","protein prenylation",11,1,2.04,0.89555,1,null,"GO:0006085","acetyl-CoA biosynthetic process",19,2,3.22,0.72773,1,null,"GO:0048523","negative regulation of cellular process",544,137,107.73,0.69769,1]
["GO:0051017","actin filament bundle assembly",17,1,2.02,0.88343,1,null,"GO:0032042","mitochondrial DNA metabolic process",11,1,2.04,0.89555,1,null,"GO:0032535","regulation of cellular component size",45,6,7.63,0.72779,1,null,"GO:0010629","negative regulation of gene expression",280,69,55.45,0.70288,1]
["GO:0031047","RNA-mediated gene silencing",109,8,12.94,0.88395,1,null,"GO:0090158","endoplasmic reticulum membrane organization",11,1,2.04,0.89555,1,null,"GO:0065001","specification of axis polarity",27,2,4.58,0.72792,1,null,"GO:0032543","mitochondrial translation",29,5,5.74,0.7074,1]
["GO:0042127","regulation of cell population proliferation",64,6,7.6,0.88982,1,null,"GO:1901371","regulation of leaf morphogenesis",11,1,2.04,0.89555,1,null,"GO:0045859","regulation of protein kinase activity",52,2,8.81,0.72848,1,null,"GO:0009834","plant-type secondary cell wall biogenesis",44,7,8.71,0.7077,1]
["GO:0006487","protein N-linked glycosylation",42,3,4.99,0.8899,1,null,"GO:0019288","isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway",11,1,2.04,0.89555,1,null,"GO:0090150","establishment of protein localization to membrane",101,10,17.12,0.72853,1,null,"GO:0048589","developmental growth",882,181,174.67,0.71399,1]
["GO:0009226","nucleotide-sugar biosynthetic process",42,3,4.99,0.8899,1,null,"GO:0090110","COPII-coated vesicle cargo loading",11,1,2.04,0.89555,1,null,"GO:0009825","multidimensional cell growth",35,5,5.93,0.73072,1,null,"GO:0010817","regulation of hormone levels",179,56,35.45,0.71549,1]
["GO:0006897","endocytosis",71,4,8.43,0.8904,1,null,"GO:0052544","defense response by callose deposition in cell wall",11,1,2.04,0.89555,1,null,"GO:0018105","peptidyl-serine phosphorylation",87,13,14.75,0.73399,1,null,"GO:0044242","cellular lipid catabolic process",93,29,18.42,0.71748,1]
["GO:0006974","cellular response to DNA damage stimulus",359,54,42.62,0.89504,1,null,"GO:0010050","vegetative phase change",11,1,2.04,0.89555,1,null,"GO:0006897","endocytosis",71,16,12.04,0.7373,1,null,"GO:0016042","lipid catabolic process",105,31,20.79,0.71756,1]
["GO:0051603","proteolysis involved in protein catabolic process",472,26,56.03,0.89564,1,null,"GO:0051123","RNA polymerase II preinitiation complex assembly",11,1,2.04,0.89555,1,null,"GO:0043622","cortical microtubule organization",42,6,7.12,0.73893,1,null,"GO:0051240","positive regulation of multicellular organismal process",77,24,15.25,0.71785,1]
["GO:0071407","cellular response to organic cyclic compound",271,33,32.17,0.89683,1,null,"GO:0009690","cytokinin metabolic process",11,1,2.04,0.89555,1,null,"GO:0006091","generation of precursor metabolites and energy",395,103,66.96,0.7427,1,null,"GO:0097659","nucleic acid-templated transcription",1640,426,324.78,0.71832,1]
["GO:0048510","regulation of timing of transition from vegetative to reproductive phase",31,2,3.68,0.89725,1,null,"GO:0048441","petal development",11,1,2.04,0.89555,1,null,"GO:0016114","terpenoid biosynthetic process",133,28,22.55,0.7448,1,null,"GO:0045454","cell redox homeostasis",35,6,6.93,0.71863,1]
["GO:1903008","organelle disassembly",31,2,3.68,0.89725,1,null,"GO:0006222","UMP biosynthetic process",11,1,2.04,0.89555,1,null,"GO:0051050","positive regulation of transport",22,3,3.73,0.74626,1,null,"GO:0051261","protein depolymerization",31,8,6.14,0.7192,1]
["GO:1902600","proton transmembrane transport",31,2,3.68,0.89725,1,null,"GO:0000479","endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)",11,1,2.04,0.89555,1,null,"GO:0071669","plant-type cell wall organization or biogenesis",460,73,77.98,0.74912,1,null,"GO:0033043","regulation of organelle organization",117,25,23.17,0.7192,1]
["GO:0002097","tRNA wobble base modification",18,1,2.14,0.89728,1,null,"GO:0031053","primary miRNA processing",11,1,2.04,0.89555,1,null,"GO:0010267","ta-siRNA processing",15,2,2.54,0.7497,1,null,"GO:0030865","cortical cytoskeleton organization",49,10,9.7,0.7195,1]
["GO:0016075","rRNA catabolic process",18,1,2.14,0.89728,1,null,"GO:1901001","negative regulation of response to salt stress",11,1,2.04,0.89555,1,null,"GO:1900457","regulation of brassinosteroid mediated signaling pathway",15,2,2.54,0.7497,1,null,"GO:0006368","transcription elongation by RNA polymerase II",34,7,6.73,0.71951,1]
["GO:0071216","cellular response to biotic stimulus",18,1,2.14,0.89728,1,null,"GO:0015866","ADP transport",11,1,2.04,0.89555,1,null,"GO:0032386","regulation of intracellular transport",15,2,2.54,0.7497,1,null,"GO:0046165","alcohol biosynthetic process",67,13,13.27,0.71961,1]
["GO:0052324","plant-type cell wall cellulose biosynthetic process",18,1,2.14,0.89728,1,null,"GO:0015867","ATP transport",11,1,2.04,0.89555,1,null,"GO:0009396","folic acid-containing compound biosynthetic process",15,2,2.54,0.7497,1,null,"GO:0010411","xyloglucan metabolic process",22,4,4.36,0.71963,1]
["GO:0031060","regulation of histone methylation",18,1,2.14,0.89728,1,null,"GO:0010315","auxin export across the plasma membrane",11,1,2.04,0.89555,1,null,"GO:0046688","response to copper ion",15,2,2.54,0.7497,1,null,"GO:0010143","cutin biosynthetic process",12,2,2.38,0.71963,1]
["GO:0008360","regulation of cell shape",18,1,2.14,0.89728,1,null,"GO:0010332","response to gamma radiation",11,1,2.04,0.89555,1,null,"GO:0062014","negative regulation of small molecule metabolic process",15,2,2.54,0.7497,1,null,"GO:0006656","phosphatidylcholine biosynthetic process",12,2,2.38,0.71963,1]
["GO:0046185","aldehyde catabolic process",18,1,2.14,0.89728,1,null,"GO:0010600","regulation of auxin biosynthetic process",11,1,2.04,0.89555,1,null,"GO:0010600","regulation of auxin biosynthetic process",15,2,2.54,0.7497,1,null,"GO:2000762","regulation of phenylpropanoid metabolic process",12,2,2.38,0.71963,1]
["GO:0042548","regulation of photosynthesis, light reaction",29,2,3.44,0.89732,1,null,"GO:0016441","post-transcriptional gene silencing",58,9,10.76,0.89562,1,null,"GO:0042775","mitochondrial ATP synthesis coupled electron transport",42,6,7.12,0.7498,1,null,"GO:0080001","mucilage extrusion from seed coat",12,2,2.38,0.71963,1]
["GO:0009863","salicylic acid mediated signaling pathway",90,7,10.68,0.89748,1,null,"GO:0009696","salicylic acid metabolic process",32,4,5.94,0.89563,1,null,"GO:0043068","positive regulation of programmed cell death",27,3,4.58,0.74989,1,null,"GO:2000033","regulation of seed dormancy process",12,2,2.38,0.71963,1]
["GO:0035970","peptidyl-threonine dephosphorylation",43,3,5.1,0.89909,1,null,"GO:0000460","maturation of 5.8S rRNA",31,2,5.75,0.89581,1,null,"GO:0016579","protein deubiquitination",69,10,11.7,0.75423,1,null,"GO:0034314","Arp2/3 complex-mediated actin nucleation",12,2,2.38,0.71963,1]
["GO:2000377","regulation of reactive oxygen species metabolic process",56,4,6.65,0.89919,1,null,"GO:0010948","negative regulation of cell cycle process",37,3,6.87,0.89582,1,null,"GO:0007389","pattern specification process",289,26,48.99,0.76017,1,null,"GO:0010227","floral organ abscission",12,2,2.38,0.71963,1]
["GO:0000281","mitotic cytokinesis",32,2,3.8,0.9071,1,null,"GO:0048467","gynoecium development",64,8,11.88,0.89582,1,null,"GO:0051234","establishment of localization",2002,380,339.37,0.76786,1,null,"GO:0005977","glycogen metabolic process",12,2,2.38,0.71963,1]
["GO:0006515","protein quality control for misfolded or incompletely synthesized proteins",32,2,3.8,0.9071,1,null,"GO:0031324","negative regulation of cellular metabolic process",351,61,65.14,0.89585,1,null,"GO:0006066","alcohol metabolic process",134,47,22.72,0.77063,1,null,"GO:0010044","response to aluminum ion",12,2,2.38,0.71963,1]
["GO:1990961","xenobiotic detoxification by transmembrane export across the plasma membrane",32,2,3.8,0.9071,1,null,"GO:0016571","histone methylation",49,4,9.09,0.89594,1,null,"GO:0000045","autophagosome assembly",30,4,5.09,0.77301,1,null,"GO:0051262","protein tetramerization",12,2,2.38,0.71963,1]
["GO:1900150","regulation of defense response to fungus",32,2,3.8,0.9071,1,null,"GO:0006644","phospholipid metabolic process",170,26,31.55,0.89598,1,null,"GO:0002229","defense response to oomycetes",42,6,7.12,0.77302,1,null,"GO:0042761","very long-chain fatty acid biosynthetic process",12,2,2.38,0.71963,1]
["GO:0080135","regulation of cellular response to stress",84,6,9.97,0.90744,1,null,"GO:0010051","xylem and phloem pattern formation",56,6,10.39,0.89949,1,null,"GO:0048653","anther development",51,8,8.65,0.77362,1,null,"GO:0040020","regulation of meiotic nuclear division",12,2,2.38,0.71963,1]
["GO:0009615","response to virus",89,6,10.56,0.90753,1,null,"GO:0090698","post-embryonic plant morphogenesis",123,18,22.83,0.90076,1,null,"GO:0006637","acyl-CoA metabolic process",43,8,7.29,0.77366,1,null,"GO:0006270","DNA replication initiation",12,2,2.38,0.71963,1]
["GO:0070588","calcium ion transmembrane transport",44,3,5.22,0.90757,1,null,"GO:0009911","positive regulation of flower development",27,3,5.01,0.90083,1,null,"GO:0044743","protein transmembrane import into intracellular organelle",45,8,7.63,0.7737,1,null,"GO:0015937","coenzyme A biosynthetic process",12,2,2.38,0.71963,1]
["GO:0006289","nucleotide-excision repair",44,3,5.22,0.90757,1,null,"GO:1901137","carbohydrate derivative biosynthetic process",403,63,74.79,0.90208,1,null,"GO:0006783","heme biosynthetic process",21,3,3.56,0.77382,1,null,"GO:0034063","stress granule assembly",12,2,2.38,0.71963,1]
["GO:0044030","regulation of DNA methylation",19,1,2.26,0.90949,1,null,"GO:0009846","pollen germination",55,7,10.21,0.90655,1,null,"GO:0046470","phosphatidylcholine metabolic process",21,3,3.56,0.77382,1,null,"GO:0060321","acceptance of pollen",12,2,2.38,0.71963,1]
["GO:2000024","regulation of leaf development",19,1,2.26,0.90949,1,null,"GO:0006396","RNA processing",815,100,151.25,0.9083,1,null,"GO:0046112","nucleobase biosynthetic process",21,2,3.56,0.77394,1,null,"GO:0006863","purine nucleobase transport",12,2,2.38,0.71963,1]
["GO:0006012","galactose metabolic process",19,1,2.26,0.90949,1,null,"GO:0034614","cellular response to reactive oxygen species",30,6,5.57,0.90832,1,null,"GO:0010054","trichoblast differentiation",131,19,22.21,0.77416,1,null,"GO:0006828","manganese ion transport",12,2,2.38,0.71963,1]
["GO:0015749","monosaccharide transmembrane transport",19,1,2.26,0.90949,1,null,"GO:0042343","indole glucosinolate metabolic process",20,2,3.71,0.90858,1,null,"GO:0009741","response to brassinosteroid",97,10,16.44,0.77434,1,null,"GO:0006260","DNA replication",109,16,21.59,0.72065,1]
["GO:0006862","nucleotide transport",19,1,2.26,0.90949,1,null,"GO:0006614","SRP-dependent cotranslational protein targeting to membrane",20,2,3.71,0.90858,1,null,"GO:0016571","histone methylation",53,4,8.98,0.77438,1,null,"GO:0048653","anther development",40,10,7.92,0.72137,1]
["GO:0010337","regulation of salicylic acid metabolic process",19,1,2.26,0.90949,1,null,"GO:0010078","maintenance of root meristem identity",20,2,3.71,0.90858,1,null,"GO:0044036","cell wall macromolecule metabolic process",157,14,26.61,0.77535,1,null,"GO:0000422","autophagy of mitochondrion",18,3,3.56,0.722,1]
["GO:0051171","regulation of nitrogen compound metabolic process",2830,321,335.94,0.91247,1,null,"GO:0009962","regulation of flavonoid biosynthetic process",20,2,3.71,0.90858,1,null,"GO:0042546","cell wall biogenesis",377,50,63.91,0.77907,1,null,"GO:0000165","MAPK cascade",18,3,3.56,0.722,1]
["GO:0006952","defense response",1953,172,231.84,0.91315,1,null,"GO:0006833","water transport",20,2,3.71,0.90858,1,null,"GO:0048609","multicellular organismal reproductive process",199,46,33.73,0.77939,1,null,"GO:0006568","tryptophan metabolic process",37,6,7.33,0.72218,1]
["GO:0006869","lipid transport",84,7,9.97,0.91552,1,null,"GO:0051172","negative regulation of nitrogen compound metabolic process",301,51,55.86,0.90896,1,null,"GO:0048481","plant ovule development",44,6,7.46,0.77951,1,null,"GO:0048646","anatomical structure formation involved in morphogenesis",167,49,33.07,0.72309,1]
["GO:0006833","water transport",33,2,3.92,0.91607,1,null,"GO:0009626","plant-type hypersensitive response",58,7,10.76,0.91155,1,null,"GO:0008654","phospholipid biosynthetic process",133,26,22.55,0.78097,1,null,"GO:0051234","establishment of localization",1784,404,353.3,0.72617,1]
["GO:0009738","abscisic acid-activated signaling pathway",229,19,27.18,0.91842,1,null,"GO:0009863","salicylic acid mediated signaling pathway",73,10,13.55,0.91167,1,null,"GO:0043067","regulation of programmed cell death",77,16,13.05,0.78106,1,null,"GO:0000387","spliceosomal snRNP assembly",24,4,4.75,0.72858,1]
["GO:0009850","auxin metabolic process",56,14,6.65,0.91932,1,null,"GO:0050793","regulation of developmental process",1122,182,208.23,0.91181,1,null,"GO:0035194","RNA-mediated post-transcriptional gene silencing",42,9,7.12,0.78125,1,null,"GO:0009960","endosperm development",24,4,4.75,0.72858,1]
["GO:0006164","purine nucleotide biosynthetic process",117,18,13.89,0.91966,1,null,"GO:0043069","negative regulation of programmed cell death",28,3,5.2,0.91407,1,null,"GO:0044283","small molecule biosynthetic process",878,166,148.83,0.78136,1,null,"GO:0016197","endosomal transport",73,15,14.46,0.72863,1]
["GO:0030042","actin filament depolymerization",20,1,2.37,0.92024,1,null,"GO:0009967","positive regulation of signal transduction",67,9,12.43,0.91424,1,null,"GO:0048564","photosystem I assembly",16,2,2.71,0.7817,1,null,"GO:0034660","ncRNA metabolic process",474,131,93.87,0.72881,1]
["GO:0055062","phosphate ion homeostasis",20,1,2.37,0.92024,1,null,"GO:0009856","pollination",214,42,39.72,0.91465,1,null,"GO:0019321","pentose metabolic process",16,2,2.71,0.7817,1,null,"GO:1900140","regulation of seedling development",87,28,17.23,0.73255,1]
["GO:0034308","primary alcohol metabolic process",20,1,2.37,0.92024,1,null,"GO:0051053","negative regulation of DNA metabolic process",29,7,5.38,0.91471,1,null,"GO:0048354","mucilage biosynthetic process involved in seed coat development",16,2,2.71,0.7817,1,null,"GO:0050658","RNA transport",52,16,10.3,0.73324,1]
["GO:0046856","phosphatidylinositol dephosphorylation",20,1,2.37,0.92024,1,null,"GO:0030050","vesicle transport along actin filament",12,1,2.23,0.91495,1,null,"GO:0007064","mitotic sister chromatid cohesion",16,2,2.71,0.7817,1,null,"GO:0071218","cellular response to misfolded protein",22,9,4.36,0.73339,1]
["GO:0045292","mRNA cis splicing, via spliceosome",20,1,2.37,0.92024,1,null,"GO:0006656","phosphatidylcholine biosynthetic process",12,1,2.23,0.91495,1,null,"GO:0048831","regulation of shoot system development",172,28,29.16,0.78178,1,null,"GO:0009165","nucleotide biosynthetic process",143,31,28.32,0.73365,1]
["GO:0043200","response to amino acid",20,1,2.37,0.92024,1,null,"GO:0009861","jasmonic acid and ethylene-dependent systemic resistance",12,1,2.23,0.91495,1,null,"GO:0048589","developmental growth",1058,172,179.35,0.78277,1,null,"GO:0009312","oligosaccharide biosynthetic process",29,8,5.74,0.73371,1]
["GO:0070897","transcription preinitiation complex assembly",20,1,2.37,0.92024,1,null,"GO:0072350","tricarboxylic acid metabolic process",12,1,2.23,0.91495,1,null,"GO:0099402","plant organ development",1737,287,294.45,0.78303,1,null,"GO:1901401","regulation of tetrapyrrole metabolic process",43,10,8.52,0.73382,1]
["GO:0010492","maintenance of shoot apical meristem identity",20,1,2.37,0.92024,1,null,"GO:0006493","protein O-linked glycosylation",12,1,2.23,0.91495,1,null,"GO:0010383","cell wall polysaccharide metabolic process",127,10,21.53,0.78361,1,null,"GO:0000281","mitotic cytokinesis",24,6,4.75,0.73385,1]
["GO:0010374","stomatal complex development",80,8,9.5,0.92026,1,null,"GO:0048363","mucilage pectin metabolic process",12,1,2.23,0.91495,1,null,"GO:0045454","cell redox homeostasis",38,5,6.44,0.79564,1,null,"GO:0048871","multicellular organismal-level homeostasis",25,6,4.95,0.73387,1]
["GO:0071483","cellular response to blue light",39,3,4.63,0.92027,1,null,"GO:0034314","Arp2/3 complex-mediated actin nucleation",12,1,2.23,0.91495,1,null,"GO:1990542","mitochondrial transmembrane transport",56,6,9.49,0.7958,1,null,"GO:0034762","regulation of transmembrane transport",16,4,3.17,0.7339,1]
["GO:0048232","male gamete generation",46,3,5.46,0.92263,1,null,"GO:0010225","response to UV-C",12,1,2.23,0.91495,1,null,"GO:0048768","root hair cell tip growth",24,3,4.07,0.79861,1,null,"GO:0006637","acyl-CoA metabolic process",37,8,7.33,0.73393,1]
["GO:0006874","intracellular calcium ion homeostasis",46,3,5.46,0.92263,1,null,"GO:0016559","peroxisome fission",12,1,2.23,0.91495,1,null,"GO:0060586","multicellular organismal-level iron ion homeostasis",24,3,4.07,0.79861,1,null,"GO:0051503","adenine nucleotide transport",17,4,3.37,0.73393,1]
["GO:0010431","seed maturation",94,10,11.16,0.9241,1,null,"GO:0033962","P-body assembly",12,1,2.23,0.91495,1,null,"GO:0006631","fatty acid metabolic process",279,53,47.29,0.80684,1,null,"GO:0006085","acetyl-CoA biosynthetic process",17,4,3.37,0.73393,1]
["GO:0016579","protein deubiquitination",69,5,8.19,0.92434,1,null,"GO:0006189","de novo' IMP biosynthetic process",12,1,2.23,0.91495,1,null,"GO:0046246","terpene biosynthetic process",17,2,2.88,0.81006,1,null,"GO:0018345","protein palmitoylation",23,5,4.55,0.73396,1]
["GO:0009892","negative regulation of metabolic process",948,86,112.53,0.92757,1,null,"GO:0019856","pyrimidine nucleobase biosynthetic process",12,1,2.23,0.91495,1,null,"GO:0016998","cell wall macromolecule catabolic process",17,2,2.88,0.81006,1,null,"GO:0006641","triglyceride metabolic process",19,4,3.76,0.73398,1]
["GO:0023052","signaling",1945,164,230.89,0.92768,1,null,"GO:0018107","peptidyl-threonine phosphorylation",12,1,2.23,0.91495,1,null,"GO:0007155","cell adhesion",17,2,2.88,0.81006,1,null,"GO:0006665","sphingolipid metabolic process",47,9,9.31,0.73406,1]
["GO:0006096","glycolytic process",47,3,5.58,0.92929,1,null,"GO:0042753","positive regulation of circadian rhythm",12,1,2.23,0.91495,1,null,"GO:0016131","brassinosteroid metabolic process",17,2,2.88,0.81006,1,null,"GO:0015748","organophosphate ester transport",42,8,8.32,0.73406,1]
["GO:0002213","defense response to insect",60,4,7.12,0.92937,1,null,"GO:0032365","intracellular lipid transport",12,1,2.23,0.91495,1,null,"GO:0080036","regulation of cytokinin-activated signaling pathway",17,2,2.88,0.81006,1,null,"GO:0009116","nucleoside metabolic process",22,4,4.36,0.73406,1]
["GO:0010074","maintenance of meristem identity",65,8,7.72,0.92955,1,null,"GO:0015937","coenzyme A biosynthetic process",12,1,2.23,0.91495,1,null,"GO:0006241","CTP biosynthetic process",17,2,2.88,0.81006,1,null,"GO:0046470","phosphatidylcholine metabolic process",18,3,3.56,0.73409,1]
["GO:0019538","protein metabolic process",3476,385,412.63,0.92962,1,null,"GO:0006949","syncytium formation",12,1,2.23,0.91495,1,null,"GO:0071229","cellular response to acid chemical",40,15,6.78,0.81112,1,null,"GO:0009067","aspartate family amino acid biosynthetic process",40,7,7.92,0.73414,1]
["GO:0044275","cellular carbohydrate catabolic process",41,4,4.87,0.92966,1,null,"GO:0051784","negative regulation of nuclear division",12,1,2.23,0.91495,1,null,"GO:0048528","post-embryonic root development",124,25,21.02,0.81162,1,null,"GO:0006829","zinc ion transport",16,2,3.17,0.73417,1]
["GO:0009240","isopentenyl diphosphate biosynthetic process",21,1,2.49,0.92972,1,null,"GO:0002182","cytoplasmic translational elongation",12,1,2.23,0.91495,1,null,"GO:0098739","import across plasma membrane",29,8,4.92,0.81173,1,null,"GO:0032102","negative regulation of response to external stimulus",38,6,7.53,0.73422,1]
["GO:2000067","regulation of root morphogenesis",21,1,2.49,0.92972,1,null,"GO:1901703","protein localization involved in auxin polar transport",12,1,2.23,0.91495,1,null,"GO:0034440","lipid oxidation",57,12,9.66,0.81182,1,null,"GO:0002832","negative regulation of response to biotic stimulus",38,6,7.53,0.73422,1]
["GO:0009306","protein secretion",21,1,2.49,0.92972,1,null,"GO:0010310","regulation of hydrogen peroxide metabolic process",12,1,2.23,0.91495,1,null,"GO:0061025","membrane fusion",57,12,9.66,0.81182,1,null,"GO:0001932","regulation of protein phosphorylation",39,6,7.72,0.73425,1]
["GO:1901576","organic substance biosynthetic process",5490,814,651.7,0.92989,1,null,"GO:0006882","intracellular zinc ion homeostasis",12,1,2.23,0.91495,1,null,"GO:0043170","macromolecule metabolic process",8651,1263,1466.48,0.81196,1,null,"GO:0044092","negative regulation of molecular function",35,4,6.93,0.73441,1]
["GO:0009787","regulation of abscisic acid-activated signaling pathway",119,10,14.13,0.92998,1,null,"GO:0045010","actin nucleation",24,2,4.45,0.91505,1,null,"GO:0070897","transcription preinitiation complex assembly",20,3,3.39,0.81214,1,null,"GO:0072527","pyrimidine-containing compound metabolic process",48,6,9.51,0.73449,1]
["GO:0006790","sulfur compound metabolic process",515,81,61.13,0.93005,1,null,"GO:0051261","protein depolymerization",31,3,5.75,0.91508,1,null,"GO:0019217","regulation of fatty acid metabolic process",22,3,3.73,0.81218,1,null,"GO:0065003","protein-containing complex assembly",475,76,94.07,0.73832,1]
["GO:0009637","response to blue light",162,13,19.23,0.93009,1,null,"GO:0032881","regulation of polysaccharide metabolic process",39,2,7.24,0.91529,1,null,"GO:0031124","mRNA 3'-end processing",34,5,5.76,0.81218,1,null,"GO:0019760","glucosinolate metabolic process",132,23,26.14,0.74792,1]
["GO:0051252","regulation of RNA metabolic process",1996,201,236.94,0.93011,1,null,"GO:0044772","mitotic cell cycle phase transition",48,3,8.91,0.91535,1,null,"GO:0048193","Golgi vesicle transport",171,28,28.99,0.81221,1,null,"GO:0048522","positive regulation of cellular process",695,175,137.64,0.74832,1]
["GO:0006338","chromatin remodeling",127,15,15.08,0.93077,1,null,"GO:0006260","DNA replication",109,14,20.23,0.91537,1,null,"GO:0000272","polysaccharide catabolic process",72,11,12.21,0.81224,1,null,"GO:0006366","transcription by RNA polymerase II",329,84,65.15,0.75225,1]
["GO:0051604","protein maturation",93,12,11.04,0.93122,1,null,"GO:0048831","regulation of shoot system development",146,20,27.1,0.91545,1,null,"GO:0010016","shoot system morphogenesis",226,28,38.31,0.81245,1,null,"GO:0051093","negative regulation of developmental process",141,41,27.92,0.75516,1]
["GO:0006406","mRNA export from nucleus",35,2,4.15,0.93162,1,null,"GO:0019318","hexose metabolic process",71,6,13.18,0.91545,1,null,"GO:0071370","cellular response to gibberellin stimulus",60,6,10.17,0.81259,1,null,"GO:0006465","signal peptide processing",19,3,3.76,0.7568,1]
["GO:0010565","regulation of cellular ketone metabolic process",119,12,14.13,0.93533,1,null,"GO:0010817","regulation of hormone levels",179,25,33.22,0.91555,1,null,"GO:0048509","regulation of meristem development",50,4,8.48,0.81262,1,null,"GO:0032508","DNA duplex unwinding",19,3,3.76,0.7568,1]
["GO:0071482","cellular response to light stimulus",171,14,20.3,0.93552,1,null,"GO:0006402","mRNA catabolic process",101,10,18.74,0.91559,1,null,"GO:0043414","macromolecule methylation",189,9,32.04,0.81483,1,null,"GO:0010555","response to mannitol",19,3,3.76,0.7568,1]
["GO:0042430","indole-containing compound metabolic process",146,32,17.33,0.93659,1,null,"GO:0007389","pattern specification process",205,23,38.05,0.91582,1,null,"GO:0006383","transcription by RNA polymerase III",25,3,4.24,0.8212,1,null,"GO:0000162","tryptophan biosynthetic process",19,3,3.76,0.7568,1]
["GO:0018193","peptidyl-amino acid modification",254,19,30.15,0.93664,1,null,"GO:0031146","SCF-dependent proteasomal ubiquitin-dependent protein catabolic process",56,7,10.39,0.91594,1,null,"GO:0006396","RNA processing",819,85,138.83,0.82776,1,null,"GO:0008643","carbohydrate transport",35,6,6.93,0.75684,1]
["GO:0048585","negative regulation of response to stimulus",221,28,26.23,0.93784,1,null,"GO:0016071","mRNA metabolic process",491,78,91.12,0.91599,1,null,"GO:0048316","seed development",1113,162,188.67,0.83375,1,null,"GO:0009933","meristem structural organization",69,14,13.66,0.75849,1]
["GO:0010928","regulation of auxin mediated signaling pathway",35,5,4.15,0.93785,1,null,"GO:0071705","nitrogen compound transport",694,99,128.8,0.91628,1,null,"GO:0051128","regulation of cellular component organization",282,35,47.8,0.83426,1,null,"GO:0042548","regulation of photosynthesis, light reaction",25,4,4.95,0.75883,1]
["GO:1990110","callus formation",22,1,2.61,0.93808,1,null,"GO:0007005","mitochondrion organization",171,33,31.74,0.91807,1,null,"GO:0050829","defense response to Gram-negative bacterium",18,2,3.05,0.83508,1,null,"GO:0140115","export across plasma membrane",48,16,9.51,0.75987,1]
["GO:0009959","negative gravitropism",22,1,2.61,0.93808,1,null,"GO:0009888","tissue development",1119,166,207.67,0.91865,1,null,"GO:0009641","shade avoidance",18,2,3.05,0.83508,1,null,"GO:0042435","indole-containing compound biosynthetic process",79,17,15.64,0.76,1]
["GO:0006006","glucose metabolic process",45,3,5.34,0.93814,1,null,"GO:0009793","embryo development ending in seed dormancy",583,94,108.2,0.91933,1,null,"GO:0010817","regulation of hormone levels",219,34,37.12,0.8354,1,null,"GO:0018205","peptidyl-lysine modification",97,21,19.21,0.76074,1]
["GO:0043562","cellular response to nitrogen levels",36,2,4.27,0.93833,1,null,"GO:0006499","N-terminal protein myristoylation",36,4,6.68,0.92224,1,null,"GO:0010646","regulation of cell communication",403,102,68.31,0.84013,1,null,"GO:0042023","DNA endoreduplication",37,9,7.33,0.76076,1]
["GO:0006520","amino acid metabolic process",524,77,62.2,0.93856,1,null,"GO:0048544","recognition of pollen",33,5,6.12,0.92243,1,null,"GO:1901617","organic hydroxy compound biosynthetic process",191,50,32.38,0.84311,1,null,"GO:0010440","stomatal lineage progression",13,2,2.57,0.76118,1]
["GO:0007030","Golgi organization",37,2,4.39,0.94441,1,null,"GO:0007052","mitotic spindle organization",21,2,3.9,0.92251,1,null,"GO:0009070","serine family amino acid biosynthetic process",38,11,6.44,0.84344,1,null,"GO:0009089","lysine biosynthetic process via diaminopimelate",13,2,2.57,0.76118,1]
["GO:0071805","potassium ion transmembrane transport",37,2,4.39,0.94441,1,null,"GO:0060627","regulation of vesicle-mediated transport",21,2,3.9,0.92251,1,null,"GO:0000096","sulfur amino acid metabolic process",57,13,9.66,0.84357,1,null,"GO:0009074","aromatic amino acid family catabolic process",13,2,2.57,0.76118,1]
["GO:0009909","regulation of flower development",156,12,18.52,0.94475,1,null,"GO:0010090","trichome morphogenesis",50,6,9.28,0.9226,1,null,"GO:0006813","potassium ion transport",47,11,7.97,0.84361,1,null,"GO:0006535","cysteine biosynthetic process from serine",13,2,2.57,0.76118,1]
["GO:0010605","negative regulation of macromolecule metabolic process",642,61,76.21,0.94503,1,null,"GO:0009965","leaf morphogenesis",81,10,15.03,0.92263,1,null,"GO:1901658","glycosyl compound catabolic process",25,6,4.24,0.84375,1,null,"GO:0006303","double-strand break repair via nonhomologous end joining",13,2,2.57,0.76118,1]
["GO:2000243","positive regulation of reproductive process",55,5,6.53,0.94542,1,null,"GO:0070646","protein modification by small protein removal",88,7,16.33,0.9233,1,null,"GO:0008283","cell population proliferation",74,14,12.54,0.84378,1,null,"GO:0006474","N-terminal protein amino acid acetylation",13,2,2.57,0.76118,1]
["GO:0090630","activation of GTPase activity",23,1,2.73,0.94544,1,null,"GO:0042254","ribosome biogenesis",327,22,60.69,0.92643,1,null,"GO:0019953","sexual reproduction",119,21,20.17,0.84385,1,null,"GO:0034427","nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'",13,2,2.57,0.76118,1]
["GO:0050826","response to freezing",23,1,2.73,0.94544,1,null,"GO:0009606","tropism",106,10,19.67,0.92658,1,null,"GO:0090114","COPII-coated vesicle budding",21,4,3.56,0.84389,1,null,"GO:0046513","ceramide biosynthetic process",13,2,2.57,0.76118,1]
["GO:0051260","protein homooligomerization",23,1,2.73,0.94544,1,null,"GO:0065004","protein-DNA complex assembly",59,16,10.95,0.93026,1,null,"GO:2000104","negative regulation of DNA-templated DNA replication",10,1,1.7,0.84401,1,null,"GO:1900425","negative regulation of defense response to bacterium",13,2,2.57,0.76118,1]
["GO:0009891","positive regulation of biosynthetic process",434,43,51.52,0.94601,1,null,"GO:1902531","regulation of intracellular signal transduction",40,7,7.42,0.93067,1,null,"GO:0010215","cellulose microfibril organization",10,1,1.7,0.84401,1,null,"GO:0045936","negative regulation of phosphate metabolic process",13,2,2.57,0.76118,1]
["GO:0042752","regulation of circadian rhythm",62,4,7.36,0.94644,1,null,"GO:0010363","regulation of plant-type hypersensitive response",23,3,4.27,0.93073,1,null,"GO:0051176","positive regulation of sulfur metabolic process",10,1,1.7,0.84401,1,null,"GO:0061024","membrane organization",222,42,43.96,0.76144,1]
["GO:0042542","response to hydrogen peroxide",62,4,7.36,0.94644,1,null,"GO:0010440","stomatal lineage progression",13,1,2.41,0.93075,1,null,"GO:0010239","chloroplast mRNA processing",10,1,1.7,0.84401,1,null,"GO:0010192","mucilage biosynthetic process",26,3,5.15,0.76147,1]
["GO:0098542","defense response to other organism",1702,148,202.04,0.94678,1,null,"GO:0007064","mitotic sister chromatid cohesion",13,1,2.41,0.93075,1,null,"GO:1901002","positive regulation of response to salt stress",10,1,1.7,0.84401,1,null,"GO:0031349","positive regulation of defense response",81,18,16.04,0.7625,1]
["GO:0034599","cellular response to oxidative stress",69,7,8.19,0.94978,1,null,"GO:0010189","vitamin E biosynthetic process",13,1,2.41,0.93075,1,null,"GO:0006621","protein retention in ER lumen",10,1,1.7,0.84401,1,null,"GO:0006310","DNA recombination",134,16,26.54,0.76303,1]
["GO:0071417","cellular response to organonitrogen compound",38,2,4.51,0.94992,1,null,"GO:0030071","regulation of mitotic metaphase/anaphase transition",13,1,2.41,0.93075,1,null,"GO:0009554","megasporogenesis",10,1,1.7,0.84401,1,null,"GO:0012501","programmed cell death",135,26,26.74,0.76327,1]
["GO:0009910","negative regulation of flower development",51,3,6.05,0.95097,1,null,"GO:0006379","mRNA cleavage",13,1,2.41,0.93075,1,null,"GO:0033314","mitotic DNA replication checkpoint signaling",10,1,1.7,0.84401,1,null,"GO:0002229","defense response to oomycetes",31,5,6.14,0.76339,1]
["GO:0016125","sterol metabolic process",48,6,5.7,0.95176,1,null,"GO:0009828","plant-type cell wall loosening",13,1,2.41,0.93075,1,null,"GO:0070734","histone H3-K27 methylation",10,1,1.7,0.84401,1,null,"GO:0044283","small molecule biosynthetic process",710,131,140.61,0.7666,1]
["GO:0010229","inflorescence development",24,1,2.85,0.95192,1,null,"GO:0006303","double-strand break repair via nonhomologous end joining",13,1,2.41,0.93075,1,null,"GO:0048579","negative regulation of long-day photoperiodism, flowering",10,1,1.7,0.84401,1,null,"GO:0002213","defense response to insect",47,9,9.31,0.76875,1]
["GO:0042744","hydrogen peroxide catabolic process",24,1,2.85,0.95192,1,null,"GO:0006490","oligosaccharide-lipid intermediate biosynthetic process",13,1,2.41,0.93075,1,null,"GO:0042371","vitamin K biosynthetic process",10,1,1.7,0.84401,1,null,"GO:2001141","regulation of RNA biosynthetic process",1429,380,283,0.77279,1]
["GO:2000652","regulation of secondary cell wall biogenesis",24,1,2.85,0.95192,1,null,"GO:0048354","mucilage biosynthetic process involved in seed coat development",13,1,2.41,0.93075,1,null,"GO:0006901","vesicle coating",10,1,1.7,0.84401,1,null,"GO:0048507","meristem development",377,85,74.66,0.77627,1]
["GO:0060586","multicellular organismal-level iron ion homeostasis",24,1,2.85,0.95192,1,null,"GO:0006474","N-terminal protein amino acid acetylation",13,1,2.41,0.93075,1,null,"GO:1902969","mitotic DNA replication",10,1,1.7,0.84401,1,null,"GO:0019438","aromatic compound biosynthetic process",2308,560,457.07,0.78274,1]
["GO:0080111","DNA demethylation",24,1,2.85,0.95192,1,null,"GO:1901403","positive regulation of tetrapyrrole metabolic process",13,1,2.41,0.93075,1,null,"GO:1902183","regulation of shoot apical meristem development",10,1,1.7,0.84401,1,null,"GO:0019941","modification-dependent protein catabolic process",393,107,77.83,0.78288,1]
["GO:0009740","gibberellic acid mediated signaling pathway",48,3,5.7,0.95199,1,null,"GO:0009396","folic acid-containing compound biosynthetic process",13,1,2.41,0.93075,1,null,"GO:0080001","mucilage extrusion from seed coat",10,1,1.7,0.84401,1,null,"GO:0008610","lipid biosynthetic process",577,102,114.27,0.78408,1]
["GO:0015748","organophosphate ester transport",43,2,5.1,0.95202,1,null,"GO:0051781","positive regulation of cell division",13,1,2.41,0.93075,1,null,"GO:1904276","regulation of wax biosynthetic process",10,1,1.7,0.84401,1,null,"GO:0010557","positive regulation of macromolecule biosynthetic process",300,74,59.41,0.7848,1]
["GO:0050793","regulation of developmental process",1266,114,150.28,0.95222,1,null,"GO:0051701","biological process involved in interaction with host",13,1,2.41,0.93075,1,null,"GO:1901989","positive regulation of cell cycle phase transition",10,1,1.7,0.84401,1,null,"GO:0019216","regulation of lipid metabolic process",65,16,12.87,0.78629,1]
["GO:0009611","response to wounding",727,72,86.3,0.95368,1,null,"GO:0045936","negative regulation of phosphate metabolic process",13,1,2.41,0.93075,1,null,"GO:0019400","alditol metabolic process",10,1,1.7,0.84401,1,null,"GO:0016117","carotenoid biosynthetic process",26,4,5.15,0.78639,1]
["GO:1901700","response to oxygen-containing compound",2791,247,331.31,0.95427,1,null,"GO:0031058","positive regulation of histone modification",13,1,2.41,0.93075,1,null,"GO:0009166","nucleotide catabolic process",10,1,1.7,0.84401,1,null,"GO:0006865","amino acid transport",35,9,6.93,0.78642,1]
["GO:0010224","response to UV-B",64,4,7.6,0.95478,1,null,"GO:1902182","shoot apical meristem development",13,1,2.41,0.93075,1,null,"GO:0007094","mitotic spindle assembly checkpoint signaling",10,1,1.7,0.84401,1,null,"GO:0010026","trichome differentiation",57,13,11.29,0.78647,1]
["GO:0006499","N-terminal protein myristoylation",39,2,4.63,0.9549,1,null,"GO:0007135","meiosis II",13,1,2.41,0.93075,1,null,"GO:0007098","centrosome cycle",10,1,1.7,0.84401,1,null,"GO:0032509","endosome transport via multivesicular body sorting pathway",32,8,6.34,0.78647,1]
["GO:0009788","negative regulation of abscisic acid-activated signaling pathway",52,3,6.17,0.95533,1,null,"GO:0010375","stomatal complex patterning",13,1,2.41,0.93075,1,null,"GO:0071038","nuclear polyadenylation-dependent tRNA catabolic process",10,1,1.7,0.84401,1,null,"GO:0043269","regulation of monoatomic ion transport",17,4,3.37,0.7866,1]
["GO:0009567","double fertilization forming a zygote and endosperm",25,1,2.97,0.95764,1,null,"GO:1900055","regulation of leaf senescence",42,6,7.79,0.93077,1,null,"GO:1903338","regulation of cell wall organization or biogenesis",34,5,5.76,0.84402,1,null,"GO:0006813","potassium ion transport",40,8,7.92,0.78667,1]
["GO:0048024","regulation of mRNA splicing, via spliceosome",25,1,2.97,0.95764,1,null,"GO:0044275","cellular carbohydrate catabolic process",38,5,7.05,0.93079,1,null,"GO:0050776","regulation of immune response",106,17,17.97,0.84404,1,null,"GO:0071229","cellular response to acid chemical",29,5,5.74,0.78678,1]
["GO:0042364","water-soluble vitamin biosynthetic process",51,3,6.05,0.95771,1,null,"GO:0008654","phospholipid biosynthetic process",120,19,22.27,0.93089,1,null,"GO:0016570","histone modification",141,19,23.9,0.84448,1,null,"GO:0009267","cellular response to starvation",113,26,22.38,0.78681,1]
["GO:0009856","pollination",209,20,24.81,0.95784,1,null,"GO:0019827","stem cell population maintenance",58,6,10.76,0.931,1,null,"GO:0044085","cellular component biogenesis",1629,203,276.14,0.84679,1,null,"GO:0006997","nucleus organization",50,7,9.9,0.78682,1]
["GO:0006413","translational initiation",53,3,6.29,0.95932,1,null,"GO:0006955","immune response",211,30,39.16,0.93133,1,null,"GO:1901264","carbohydrate derivative transport",48,7,8.14,0.85149,1,null,"GO:0006767","water-soluble vitamin metabolic process",61,11,12.08,0.78682,1]
["GO:0006352","DNA-templated transcription initiation",73,4,8.67,0.95946,1,null,"GO:0018205","peptidyl-lysine modification",97,7,18,0.93146,1,null,"GO:0019722","calcium-mediated signaling",34,4,5.76,0.85161,1,null,"GO:0019953","sexual reproduction",99,18,19.61,0.78689,1]
["GO:1902074","response to salt",1211,61,143.75,0.96021,1,null,"GO:0010119","regulation of stomatal movement",73,12,13.55,0.93173,1,null,"GO:0016482","cytosolic transport",34,4,5.76,0.85161,1,null,"GO:0042255","ribosome assembly",57,7,11.29,0.78723,1]
["GO:0009620","response to fungus",843,69,100.07,0.96023,1,null,"GO:0036211","protein modification process",1669,219,309.75,0.93335,1,null,"GO:0043648","dicarboxylic acid metabolic process",82,15,13.9,0.85674,1,null,"GO:0006721","terpenoid metabolic process",154,25,30.5,0.78746,1]
["GO:0031326","regulation of cellular biosynthetic process",2163,230,256.76,0.96184,1,null,"GO:0008104","protein localization",641,81,118.96,0.93383,1,null,"GO:0044030","regulation of DNA methylation",19,2,3.22,0.85707,1,null,"GO:0090630","activation of GTPase activity",20,3,3.96,0.78799,1]
["GO:0007031","peroxisome organization",38,3,4.51,0.96264,1,null,"GO:0000724","double-strand break repair via homologous recombination",65,8,12.06,0.93419,1,null,"GO:0046785","microtubule polymerization",19,2,3.22,0.85707,1,null,"GO:0006614","SRP-dependent cotranslational protein targeting to membrane",20,3,3.96,0.78799,1]
["GO:0090305","nucleic acid phosphodiester bond hydrolysis",72,7,8.55,0.96264,1,null,"GO:0010305","leaf vascular tissue pattern formation",22,2,4.08,0.93442,1,null,"GO:0018230","peptidyl-L-cysteine S-palmitoylation",19,2,3.22,0.85707,1,null,"GO:0006749","glutathione metabolic process",32,5,6.34,0.78816,1]
["GO:0048586","regulation of long-day photoperiodism, flowering",26,1,3.09,0.96267,1,null,"GO:0006352","DNA-templated transcription initiation",72,10,13.36,0.93454,1,null,"GO:0007010","cytoskeleton organization",286,32,48.48,0.85928,1,null,"GO:0051641","cellular localization",1050,230,207.94,0.78818,1]
["GO:0009767","photosynthetic electron transport chain",54,4,6.41,0.96269,1,null,"GO:0010075","regulation of meristem growth",48,4,8.91,0.93469,1,null,"GO:0043650","dicarboxylic acid biosynthetic process",27,3,4.58,0.85994,1,null,"GO:0048767","root hair elongation",57,12,11.29,0.79095,1]
["GO:0007015","actin filament organization",88,7,10.45,0.96276,1,null,"GO:0010015","root morphogenesis",370,53,68.67,0.93935,1,null,"GO:0009960","endosperm development",27,3,4.58,0.85994,1,null,"GO:0006281","DNA repair",279,45,55.25,0.79173,1]
["GO:0000302","response to reactive oxygen species",137,11,16.26,0.96288,1,null,"GO:0006351","DNA-templated transcription",1611,252,298.98,0.93978,1,null,"GO:1905393","plant organ formation",116,16,19.66,0.86029,1,null,"GO:0043436","oxoacid metabolic process",1403,312,277.85,0.79339,1]
["GO:0009873","ethylene-activated signaling pathway",66,9,7.83,0.96315,1,null,"GO:0071407","cellular response to organic cyclic compound",214,30,39.72,0.94165,1,null,"GO:0009226","nucleotide-sugar biosynthetic process",42,5,7.12,0.86226,1,null,"GO:0009060","aerobic respiration",102,29,20.2,0.7956,1]
["GO:0051239","regulation of multicellular organismal process",626,48,74.31,0.96401,1,null,"GO:0010604","positive regulation of macromolecule metabolic process",637,100,118.22,0.94216,1,null,"GO:0019637","organophosphate metabolic process",531,109,90.01,0.86842,1,null,"GO:0042127","regulation of cell population proliferation",51,16,10.1,0.79611,1]
["GO:0071705","nitrogen compound transport",745,77,88.44,0.96421,1,null,"GO:2000069","regulation of post-embryonic root development",14,1,2.6,0.94361,1,null,"GO:0009826","unidimensional cell growth",343,56,58.14,0.86981,1,null,"GO:0019646","aerobic electron transport chain",42,9,8.32,0.79702,1]
["GO:0043068","positive regulation of programmed cell death",27,1,3.21,0.96711,1,null,"GO:0043328","protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorti...",14,1,2.6,0.94361,1,null,"GO:0060966","regulation of gene silencing by RNA",21,4,3.56,0.87034,1,null,"GO:0043068","positive regulation of programmed cell death",24,4,4.75,0.79726,1]
["GO:0051607","defense response to virus",57,4,6.77,0.96714,1,null,"GO:0042793","plastid transcription",14,1,2.6,0.94361,1,null,"GO:0045931","positive regulation of mitotic cell cycle",11,1,1.86,0.87047,1,null,"GO:0046246","terpene biosynthetic process",14,2,2.77,0.79727,1]
["GO:0035194","RNA-mediated post-transcriptional gene silencing",42,2,4.99,0.96716,1,null,"GO:0009612","response to mechanical stimulus",14,1,2.6,0.94361,1,null,"GO:0044843","cell cycle G1/S phase transition",11,1,1.86,0.87047,1,null,"GO:0010112","regulation of systemic acquired resistance",14,2,2.77,0.79727,1]
["GO:0043622","cortical microtubule organization",42,2,4.99,0.96716,1,null,"GO:0036297","interstrand cross-link repair",14,1,2.6,0.94361,1,null,"GO:1901071","glucosamine-containing compound metabolic process",11,1,1.86,0.87047,1,null,"GO:0034644","cellular response to UV",14,2,2.77,0.79727,1]
["GO:0051093","negative regulation of developmental process",165,11,19.59,0.96749,1,null,"GO:0010540","basipetal auxin transport",14,1,2.6,0.94361,1,null,"GO:0030497","fatty acid elongation",11,1,1.86,0.87047,1,null,"GO:0070475","rRNA base methylation",14,2,2.77,0.79727,1]
["GO:0009415","response to water",1130,56,134.14,0.9679,1,null,"GO:0045039","protein insertion into mitochondrial inner membrane",14,1,2.6,0.94361,1,null,"GO:0000289","nuclear-transcribed mRNA poly(A) tail shortening",11,1,1.86,0.87047,1,null,"GO:0010039","response to iron ion",14,2,2.77,0.79727,1]
["GO:0045087","innate immune response",221,22,26.23,0.96808,1,null,"GO:0046164","alcohol catabolic process",14,1,2.6,0.94361,1,null,"GO:0018342","protein prenylation",11,1,1.86,0.87047,1,null,"GO:0006120","mitochondrial electron transport, NADH to ubiquinone",14,2,2.77,0.79727,1]
["GO:0055085","transmembrane transport",674,74,80.01,0.96928,1,null,"GO:0006812","monoatomic cation transport",187,30,34.71,0.94382,1,null,"GO:0006349","regulation of gene expression by genomic imprinting",11,1,1.86,0.87047,1,null,"GO:0019853","L-ascorbic acid biosynthetic process",14,2,2.77,0.79727,1]
["GO:0007018","microtubule-based movement",56,3,6.65,0.96937,1,null,"GO:0016197","endosomal transport",73,8,13.55,0.94387,1,null,"GO:0031396","regulation of protein ubiquitination",11,1,1.86,0.87047,1,null,"GO:0009641","shade avoidance",14,2,2.77,0.79727,1]
["GO:0010035","response to inorganic substance",1761,118,209.04,0.96992,1,null,"GO:0042127","regulation of cell population proliferation",51,3,9.47,0.94393,1,null,"GO:0051703","biological process involved in intraspecies interaction between organisms",11,1,1.86,0.87047,1,null,"GO:1901292","nucleoside phosphate catabolic process",14,2,2.77,0.79727,1]
["GO:0019646","aerobic electron transport chain",41,2,4.87,0.97105,1,null,"GO:0009891","positive regulation of biosynthetic process",355,59,65.88,0.94397,1,null,"GO:0018216","peptidyl-arginine methylation",11,1,1.86,0.87047,1,null,"GO:0043412","macromolecule modification",2346,474,464.6,0.79731,1]
["GO:0006898","receptor-mediated endocytosis",29,1,3.44,0.97447,1,null,"GO:0000245","spliceosomal complex assembly",23,2,4.27,0.94458,1,null,"GO:0071219","cellular response to molecule of bacterial origin",11,1,1.86,0.87047,1,null,"GO:0010256","endomembrane system organization",102,17,20.2,0.79769,1]
["GO:0098739","import across plasma membrane",29,1,3.44,0.97447,1,null,"GO:0032507","maintenance of protein location in cell",23,2,4.27,0.94458,1,null,"GO:0000338","protein deneddylation",11,1,1.86,0.87047,1,null,"GO:0016053","organic acid biosynthetic process",471,84,93.28,0.79878,1]
["GO:0033500","carbohydrate homeostasis",29,1,3.44,0.97447,1,null,"GO:0007166","cell surface receptor signaling pathway",23,2,4.27,0.94458,1,null,"GO:1905428","regulation of plant organ formation",11,1,1.86,0.87047,1,null,"GO:1903046","meiotic cell cycle process",192,35,38.02,0.80358,1]
["GO:0042775","mitochondrial ATP synthesis coupled electron transport",42,2,4.99,0.97449,1,null,"GO:0009294","DNA-mediated transformation",23,2,4.27,0.94458,1,null,"GO:0000467","exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, L...",11,1,1.86,0.87047,1,null,"GO:1903506","regulation of nucleic acid-templated transcription",1422,379,281.61,0.80909,1]
["GO:0022618","ribonucleoprotein complex assembly",119,26,14.13,0.97525,1,null,"GO:0009073","aromatic amino acid family biosynthetic process",42,5,7.79,0.94463,1,null,"GO:0010444","guard mother cell differentiation",11,1,1.86,0.87047,1,null,"GO:1905392","plant organ morphogenesis",521,126,103.18,0.81045,1]
["GO:0048522","positive regulation of cellular process",807,77,95.8,0.97713,1,null,"GO:0048825","cotyledon development",31,3,5.75,0.94469,1,null,"GO:0010405","arabinogalactan protein metabolic process",11,1,1.86,0.87047,1,null,"GO:0048510","regulation of timing of transition from vegetative to reproductive phase",27,4,5.35,0.81137,1]
["GO:0098876","vesicle-mediated transport to the plasma membrane",30,1,3.56,0.9775,1,null,"GO:2000243","positive regulation of reproductive process",50,5,9.28,0.94475,1,null,"GO:0009231","riboflavin biosynthetic process",11,1,1.86,0.87047,1,null,"GO:0000373","Group II intron splicing",27,4,5.35,0.81137,1]
["GO:0098657","import into cell",30,1,3.56,0.9775,1,null,"GO:0031056","regulation of histone modification",44,4,8.17,0.94484,1,null,"GO:0010192","mucilage biosynthetic process",27,3,4.58,0.87054,1,null,"GO:0002833","positive regulation of response to biotic stimulus",71,16,14.06,0.81516,1]
["GO:1901617","organic hydroxy compound biosynthetic process",191,20,22.67,0.97751,1,null,"GO:0017148","negative regulation of translation",73,7,13.55,0.94495,1,null,"GO:0040034","regulation of development, heterochronic",42,3,7.12,0.8708,1,null,"GO:0006612","protein targeting to membrane",65,10,12.87,0.81544,1]
["GO:0006397","mRNA processing",337,25,40,0.97829,1,null,"GO:0009057","macromolecule catabolic process",734,154,136.22,0.95042,1,null,"GO:0007346","regulation of mitotic cell cycle",69,6,11.7,0.87095,1,null,"GO:0045824","negative regulation of innate immune response",21,3,4.16,0.81578,1]
["GO:0010628","positive regulation of gene expression",64,6,7.6,0.97851,1,null,"GO:0000910","cytokinesis",132,15,24.5,0.95224,1,null,"GO:0019748","secondary metabolic process",557,108,94.42,0.87389,1,null,"GO:0044265","cellular macromolecule catabolic process",535,142,105.95,0.82456,1]
["GO:0030163","protein catabolic process",537,30,63.75,0.97902,1,null,"GO:0003002","regionalization",158,17,29.32,0.95258,1,null,"GO:0042545","cell wall modification",99,19,16.78,0.87576,1,null,"GO:0010646","regulation of cell communication",356,103,70.5,0.82504,1]
["GO:1901575","organic substance catabolic process",1599,130,189.81,0.97948,1,null,"GO:0016032","viral process",24,2,4.45,0.95323,1,null,"GO:0000162","tryptophan biosynthetic process",20,2,3.39,0.87635,1,null,"GO:0043603","amide metabolic process",706,156,139.81,0.82695,1]
["GO:0016226","iron-sulfur cluster assembly",31,1,3.68,0.98018,1,null,"GO:0000027","ribosomal large subunit assembly",24,2,4.45,0.95323,1,null,"GO:0009058","biosynthetic process",5822,976,986.92,0.87866,1,null,"GO:0006090","pyruvate metabolic process",69,23,13.66,0.82783,1]
["GO:0000398","mRNA splicing, via spliceosome",211,15,25.05,0.98049,1,null,"GO:0010187","negative regulation of seed germination",24,2,4.45,0.95323,1,null,"GO:0019761","glucosinolate biosynthetic process",86,11,14.58,0.88309,1,null,"GO:0042775","mitochondrial ATP synthesis coupled electron transport",43,9,8.52,0.8282,1]
["GO:0048523","negative regulation of cellular process",639,65,75.85,0.98052,1,null,"GO:1990961","xenobiotic detoxification by transmembrane export across the plasma membrane",24,2,4.45,0.95323,1,null,"GO:0009832","plant-type cell wall biogenesis",238,31,40.34,0.88789,1,null,"GO:0051640","organelle localization",122,30,24.16,0.82824,1]
["GO:0006468","protein phosphorylation",829,70,98.41,0.98284,1,null,"GO:1901259","chloroplast rRNA processing",24,2,4.45,0.95323,1,null,"GO:0071695","anatomical structure maturation",311,61,52.72,0.88937,1,null,"GO:0007062","sister chromatid cohesion",29,10,5.74,0.82843,1]
["GO:0019439","aromatic compound catabolic process",277,23,32.88,0.98392,1,null,"GO:0006900","vesicle budding from membrane",45,3,8.35,0.95345,1,null,"GO:0051649","establishment of localization in cell",692,120,117.3,0.89209,1,null,"GO:0010267","ta-siRNA processing",15,2,2.97,0.82844,1]
["GO:0097305","response to alcohol",1127,73,133.78,0.98416,1,null,"GO:0006302","double-strand break repair",100,11,18.56,0.95362,1,null,"GO:0006368","transcription elongation by RNA polymerase II",32,7,5.42,0.89221,1,null,"GO:0045492","xylan biosynthetic process",15,2,2.97,0.82844,1]
["GO:0000070","mitotic sister chromatid segregation",64,4,7.6,0.98464,1,null,"GO:0072329","monocarboxylic acid catabolic process",59,13,10.95,0.95386,1,null,"GO:0062012","regulation of small molecule metabolic process",171,38,28.99,0.89235,1,null,"GO:0006298","mismatch repair",15,2,2.97,0.82844,1]
["GO:0006470","protein dephosphorylation",146,10,17.33,0.98581,1,null,"GO:0002098","tRNA wobble uridine modification",15,1,2.78,0.95409,1,null,"GO:0006574","valine catabolic process",12,1,2.03,0.89244,1,null,"GO:1901991","negative regulation of mitotic cell cycle phase transition",15,2,2.97,0.82844,1]
["GO:0044270","cellular nitrogen compound catabolic process",253,21,30.03,0.9859,1,null,"GO:1900056","negative regulation of leaf senescence",15,1,2.78,0.95409,1,null,"GO:0009098","leucine biosynthetic process",12,1,2.03,0.89244,1,null,"GO:2000652","regulation of secondary cell wall biogenesis",15,2,2.97,0.82844,1]
["GO:0019438","aromatic compound biosynthetic process",2790,347,331.19,0.98607,1,null,"GO:0010088","phloem development",15,1,2.78,0.95409,1,null,"GO:0006346","DNA methylation-dependent heterochromatin formation",12,1,2.03,0.89244,1,null,"GO:0048235","pollen sperm cell differentiation",15,2,2.97,0.82844,1]
["GO:0031124","mRNA 3'-end processing",34,1,4.04,0.98644,1,null,"GO:0009697","salicylic acid biosynthetic process",15,1,2.78,0.95409,1,null,"GO:0010050","vegetative phase change",12,1,2.03,0.89244,1,null,"GO:0009639","response to red or far red light",299,77,59.21,0.82845,1]
["GO:0007166","cell surface receptor signaling pathway",34,1,4.04,0.98644,1,null,"GO:1901991","negative regulation of mitotic cell cycle phase transition",15,1,2.78,0.95409,1,null,"GO:0001934","positive regulation of protein phosphorylation",12,1,2.03,0.89244,1,null,"GO:0010962","regulation of glucan biosynthetic process",26,7,5.15,0.82871,1]
["GO:0008219","cell death",205,16,24.33,0.98661,1,null,"GO:0006241","CTP biosynthetic process",15,1,2.78,0.95409,1,null,"GO:0002252","immune effector process",12,1,2.03,0.89244,1,null,"GO:0031330","negative regulation of cellular catabolic process",19,5,3.76,0.82878,1]
["GO:0010604","positive regulation of macromolecule metabolic process",710,58,84.28,0.98729,1,null,"GO:0043928","exonucleolytic catabolism of deadenylated mRNA",15,1,2.78,0.95409,1,null,"GO:0070076","histone lysine demethylation",12,1,2.03,0.89244,1,null,"GO:0010608","post-transcriptional regulation of gene expression",183,37,36.24,0.82883,1]
["GO:1902850","microtubule cytoskeleton organization involved in mitosis",35,1,4.15,0.98806,1,null,"GO:2000070","regulation of response to water deprivation",26,3,4.83,0.95409,1,null,"GO:0006189","de novo' IMP biosynthetic process",12,1,2.03,0.89244,1,null,"GO:0098739","import across plasma membrane",25,5,4.95,0.82891,1]
["GO:0010118","stomatal movement",150,8,17.81,0.98964,1,null,"GO:0040008","regulation of growth",269,48,49.92,0.95409,1,null,"GO:0031126","sno(s)RNA 3'-end processing",12,1,2.03,0.89244,1,null,"GO:0006783","heme biosynthetic process",21,4,4.16,0.82894,1]
["GO:0033993","response to lipid",2216,202,263.05,0.98976,1,null,"GO:0052546","cell wall pectin metabolic process",28,3,5.2,0.95411,1,null,"GO:0031118","rRNA pseudouridine synthesis",12,1,2.03,0.89244,1,null,"GO:0006497","protein lipidation",95,14,18.81,0.82948,1]
["GO:0051641","cellular localization",1100,98,130.58,0.98989,1,null,"GO:0048574","long-day photoperiodism, flowering",37,2,6.87,0.95426,1,null,"GO:0019430","removal of superoxide radicals",12,1,2.03,0.89244,1,null,"GO:0044093","positive regulation of molecular function",72,9,14.26,0.82953,1]
["GO:0048580","regulation of post-embryonic development",414,34,49.14,0.98993,1,null,"GO:0006796","phosphate-containing compound metabolic process",1326,182,246.09,0.95481,1,null,"GO:0045338","farnesyl diphosphate metabolic process",12,1,2.03,0.89244,1,null,"GO:0010154","fruit development",1046,206,207.15,0.83145,1]
["GO:0045944","positive regulation of transcription by RNA polymerase II",85,5,10.09,0.99055,1,null,"GO:0015031","protein transport",506,66,93.91,0.95516,1,null,"GO:0071035","nuclear polyadenylation-dependent rRNA catabolic process",12,1,2.03,0.89244,1,null,"GO:0006623","protein targeting to vacuole",34,5,6.73,0.83158,1]
["GO:0030422","siRNA processing",37,1,4.39,0.99073,1,null,"GO:0010114","response to red light",65,7,12.06,0.95719,1,null,"GO:0034052","positive regulation of plant-type hypersensitive response",12,1,2.03,0.89244,1,null,"GO:0048316","seed development",1012,201,200.41,0.83304,1]
["GO:0010256","endomembrane system organization",103,7,12.23,0.99077,1,null,"GO:0071417","cellular response to organonitrogen compound",33,3,6.12,0.9591,1,null,"GO:0006828","manganese ion transport",12,1,2.03,0.89244,1,null,"GO:1990542","mitochondrial transmembrane transport",54,6,10.69,0.83459,1]
["GO:0001666","response to hypoxia",271,32,32.17,0.99213,1,null,"GO:0046777","protein autophosphorylation",129,17,23.94,0.95955,1,null,"GO:0006086","acetyl-CoA biosynthetic process from pyruvate",12,1,2.03,0.89244,1,null,"GO:0006631","fatty acid metabolic process",219,43,43.37,0.83462,1]
["GO:0046148","pigment biosynthetic process",210,33,24.93,0.99258,1,null,"GO:0042594","response to starvation",138,31,25.61,0.96004,1,null,"GO:0016559","peroxisome fission",12,1,2.03,0.89244,1,null,"GO:0005975","carbohydrate metabolic process",631,135,124.96,0.8348,1]
["GO:0009639","response to red or far red light",373,46,44.28,0.99289,1,null,"GO:0031425","chloroplast RNA processing",25,2,4.64,0.96058,1,null,"GO:0006694","steroid biosynthetic process",36,5,6.1,0.89245,1,null,"GO:0048869","cellular developmental process",892,175,176.65,0.83502,1]
["GO:1901361","organic cyclic compound catabolic process",300,24,35.61,0.99353,1,null,"GO:0007264","small GTPase mediated signal transduction",25,2,4.64,0.96058,1,null,"GO:0010948","negative regulation of cell cycle process",54,3,9.15,0.89291,1,null,"GO:0010027","thylakoid membrane organization",52,8,10.3,0.83519,1]
["GO:0055082","intracellular chemical homeostasis",186,8,22.08,0.99383,1,null,"GO:0051254","positive regulation of RNA metabolic process",362,59,67.18,0.96096,1,null,"GO:0016071","mRNA metabolic process",493,77,83.57,0.89296,1,null,"GO:0043604","amide biosynthetic process",623,141,123.38,0.83673,1]
["GO:0046777","protein autophosphorylation",148,9,17.57,0.99386,1,null,"GO:0048646","anatomical structure formation involved in morphogenesis",167,23,30.99,0.96099,1,null,"GO:0009934","regulation of meristem structural organization",21,2,3.56,0.89321,1,null,"GO:0034605","cellular response to heat",69,12,13.66,0.83772,1]
["GO:0042440","pigment metabolic process",379,42,44.99,0.99411,1,null,"GO:0052324","plant-type cell wall cellulose biosynthetic process",16,1,2.97,0.96262,1,null,"GO:0034976","response to endoplasmic reticulum stress",114,18,19.32,0.89406,1,null,"GO:0000904","cell morphogenesis involved in differentiation",208,41,41.19,0.8402,1]
["GO:0009555","pollen development",278,20,33,0.99417,1,null,"GO:0031400","negative regulation of protein modification process",16,1,2.97,0.96262,1,null,"GO:0007030","Golgi organization",37,4,6.27,0.89421,1,null,"GO:0006952","defense response",1566,351,310.13,0.84038,1]
["GO:0033108","mitochondrial respiratory chain complex assembly",41,1,4.87,0.99441,1,null,"GO:0030307","positive regulation of cell growth",16,1,2.97,0.96262,1,null,"GO:1901362","organic cyclic compound biosynthetic process",2927,557,496.17,0.89475,1,null,"GO:0080092","regulation of pollen tube growth",22,3,4.36,0.84041,1]
["GO:0090693","plant organ senescence",299,15,35.49,0.99466,1,null,"GO:0006896","Golgi to vacuole transport",16,1,2.97,0.96262,1,null,"GO:0048869","cellular developmental process",1116,160,189.18,0.89762,1,null,"GO:1901566","organonitrogen compound biosynthetic process",1560,312,308.94,0.84168,1]
["GO:0032870","cellular response to hormone stimulus",1095,112,129.98,0.99548,1,null,"GO:0071333","cellular response to glucose stimulus",16,1,2.97,0.96262,1,null,"GO:0010605","negative regulation of macromolecule metabolic process",642,121,108.83,0.89893,1,null,"GO:0071554","cell wall organization or biogenesis",543,93,107.53,0.8418,1]
["GO:0098771","inorganic ion homeostasis",206,13,24.45,0.99587,1,null,"GO:2000242","negative regulation of reproductive process",61,8,11.32,0.96268,1,null,"GO:1901137","carbohydrate derivative biosynthetic process",482,51,81.71,0.90068,1,null,"GO:0007005","mitochondrion organization",171,18,33.86,0.8421,1]
["GO:0046700","heterocycle catabolic process",252,20,29.91,0.99588,1,null,"GO:0009152","purine ribonucleotide biosynthetic process",91,9,16.89,0.96291,1,null,"GO:0009734","auxin-activated signaling pathway",95,14,16.1,0.9022,1,null,"GO:0032501","multicellular organismal process",3637,843,720.26,0.84488,1]
["GO:0010119","regulation of stomatal movement",98,7,11.63,0.9959,1,null,"GO:0009640","photomorphogenesis",97,14,18,0.9633,1,null,"GO:0080022","primary root development",30,3,5.09,0.90422,1,null,"GO:0044255","cellular lipid metabolic process",793,146,157.04,0.84962,1]
["GO:0006366","transcription by RNA polymerase II",358,16,42.5,0.99594,1,null,"GO:0010087","phloem or xylem histogenesis",84,11,15.59,0.96336,1,null,"GO:0009958","positive gravitropism",30,3,5.09,0.90422,1,null,"GO:0009152","purine ribonucleotide biosynthetic process",91,21,18.02,0.8546,1]
["GO:0002237","response to molecule of bacterial origin",105,5,12.46,0.99637,1,null,"GO:0009749","response to glucose",58,5,10.76,0.96592,1,null,"GO:0045824","negative regulation of innate immune response",22,2,3.73,0.9079,1,null,"GO:0031123","RNA 3'-end processing",74,17,14.65,0.8547,1]
["GO:0043161","proteasome-mediated ubiquitin-dependent protein catabolic process",210,12,24.93,0.99669,1,null,"GO:0045036","protein targeting to chloroplast",56,12,10.39,0.96655,1,null,"GO:0009686","gibberellin biosynthetic process",22,2,3.73,0.9079,1,null,"GO:0030048","actin filament-based movement",16,2,3.17,0.85521,1]
["GO:0051225","spindle assembly",46,1,5.46,0.99704,1,null,"GO:0000028","ribosomal small subunit assembly",26,2,4.83,0.96681,1,null,"GO:0098754","detoxification",115,29,19.49,0.90981,1,null,"GO:0031400","negative regulation of protein modification process",16,2,3.17,0.85521,1]
["GO:0006887","exocytosis",46,1,5.46,0.99704,1,null,"GO:0010082","regulation of root meristem growth",26,2,4.83,0.96681,1,null,"GO:0060918","auxin transport",107,18,18.14,0.9106,1,null,"GO:0099515","actin filament-based transport",16,2,3.17,0.85521,1]
["GO:0048581","negative regulation of post-embryonic development",122,8,14.48,0.99705,1,null,"GO:0009555","pollen development",245,33,45.47,0.96763,1,null,"GO:0009791","post-embryonic development",2302,390,390.22,0.91061,1,null,"GO:0007029","endoplasmic reticulum organization",29,4,5.74,0.8553,1]
["GO:0006082","organic acid metabolic process",1838,248,218.18,0.99713,1,null,"GO:0009867","jasmonic acid mediated signaling pathway",116,21,21.53,0.96938,1,null,"GO:0019856","pyrimidine nucleobase biosynthetic process",13,1,2.2,0.91069,1,null,"GO:0051649","establishment of localization in cell",675,153,133.68,0.86067,1]
["GO:0071310","cellular response to organic substance",1507,141,178.89,0.99732,1,null,"GO:0051604","protein maturation",82,16,15.22,0.96943,1,null,"GO:0048829","root cap development",13,1,2.2,0.91069,1,null,"GO:0032259","methylation",197,44,39.01,0.86101,1]
["GO:0008104","protein localization",657,63,77.99,0.99735,1,null,"GO:0016556","mRNA modification",48,8,8.91,0.96951,1,null,"GO:0006312","mitotic recombination",13,1,2.2,0.91069,1,null,"GO:0010558","negative regulation of macromolecule biosynthetic process",230,62,45.55,0.86104,1]
["GO:0009416","response to light stimulus",1980,181,235.04,0.99735,1,null,"GO:2001006","regulation of cellulose biosynthetic process",17,1,3.16,0.96956,1,null,"GO:0034427","nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'",13,1,2.2,0.91069,1,null,"GO:0072593","reactive oxygen species metabolic process",103,23,20.4,0.86142,1]
["GO:0080090","regulation of primary metabolic process",2925,325,347.22,0.998,1,null,"GO:1902749","regulation of cell cycle G2/M phase transition",17,1,3.16,0.96956,1,null,"GO:0071577","zinc ion transmembrane transport",13,1,2.2,0.91069,1,null,"GO:0032103","positive regulation of response to external stimulus",73,16,14.46,0.86161,1]
["GO:0006886","intracellular protein transport",448,50,53.18,0.998,1,null,"GO:0046785","microtubule polymerization",17,1,3.16,0.96956,1,null,"GO:0010256","endomembrane system organization",103,15,17.46,0.91079,1,null,"GO:0006091","generation of precursor metabolites and energy",331,73,65.55,0.862,1]
["GO:0051640","organelle localization",128,6,15.19,0.99824,1,null,"GO:0008285","negative regulation of cell population proliferation",17,1,3.16,0.96956,1,null,"GO:0045132","meiotic chromosome segregation",57,3,9.66,0.91113,1,null,"GO:0006995","cellular response to nitrogen starvation",23,3,4.55,0.86214,1]
["GO:0050832","defense response to fungus",643,53,76.33,0.99833,1,null,"GO:0002183","cytoplasmic translational initiation",17,1,3.16,0.96956,1,null,"GO:0006260","DNA replication",148,9,25.09,0.9119,1,null,"GO:1900424","regulation of defense response to bacterium",36,5,7.13,0.86224,1]
["GO:0009889","regulation of biosynthetic process",2279,237,270.53,0.9984,1,null,"GO:0051592","response to calcium ion",17,1,3.16,0.96956,1,null,"GO:0048232","male gamete generation",46,6,7.8,0.91584,1,null,"GO:0035266","meristem growth",68,18,13.47,0.86232,1]
["GO:0009755","hormone-mediated signaling pathway",887,90,105.29,0.99842,1,null,"GO:0005982","starch metabolic process",63,7,11.69,0.96967,1,null,"GO:0009561","megagametogenesis",66,6,11.19,0.91662,1,null,"GO:0006885","regulation of pH",35,10,6.93,0.86247,1]
["GO:0006605","protein targeting",222,33,26.35,0.99856,1,null,"GO:0010099","regulation of photomorphogenesis",35,3,6.5,0.96992,1,null,"GO:0072330","monocarboxylic acid biosynthetic process",248,44,42.04,0.9182,1,null,"GO:0006787","porphyrin-containing compound catabolic process",45,11,8.91,0.86257,1]
["GO:0018105","peptidyl-serine phosphorylation",87,3,10.33,0.99867,1,null,"GO:0016573","histone acetylation",35,3,6.5,0.96992,1,null,"GO:0006606","protein import into nucleus",47,5,7.97,0.91895,1,null,"GO:0006811","monoatomic ion transport",219,45,43.37,0.86262,1]
["GO:0015994","chlorophyll metabolic process",220,23,26.12,0.99877,1,null,"GO:0051641","cellular localization",1050,135,194.87,0.97023,1,null,"GO:0006974","cellular response to DNA damage stimulus",359,25,60.86,0.92005,1,null,"GO:0032507","maintenance of protein location in cell",23,6,4.55,0.86264,1]
["GO:0046488","phosphatidylinositol metabolic process",73,2,8.67,0.99878,1,null,"GO:0009892","negative regulation of metabolic process",857,134,159.05,0.97111,1,null,"GO:0010154","fruit development",1152,166,195.28,0.92018,1,null,"GO:0050801","monoatomic ion homeostasis",168,34,33.27,0.86271,1]
["GO:0010038","response to metal ion",187,14,22.2,0.99906,1,null,"GO:0007275","multicellular organism development",3386,595,628.4,0.97127,1,null,"GO:0009553","embryo sac development",138,14,23.39,0.92046,1,null,"GO:0042398","cellular modified amino acid biosynthetic process",22,5,4.36,0.86272,1]
["GO:0061025","membrane fusion",57,1,6.77,0.99926,1,null,"GO:0043412","macromolecule modification",2346,299,435.39,0.97163,1,null,"GO:0007186","G protein-coupled receptor signaling pathway",23,2,3.9,0.92069,1,null,"GO:0045132","meiotic chromosome segregation",41,8,8.12,0.8628,1]
["GO:0031146","SCF-dependent proteasomal ubiquitin-dependent protein catabolic process",58,1,6.89,0.99935,1,null,"GO:0019538","protein metabolic process",3150,474,584.6,0.97238,1,null,"GO:0090558","plant epidermis development",505,69,85.61,0.92098,1,null,"GO:0071370","cellular response to gibberellin stimulus",48,9,9.51,0.86284,1]
["GO:0048573","photoperiodism, flowering",203,12,24.1,0.99938,1,null,"GO:0018105","peptidyl-serine phosphorylation",80,9,14.85,0.97271,1,null,"GO:0065003","protein-containing complex assembly",518,71,87.81,0.92151,1,null,"GO:0010243","response to organonitrogen compound",144,36,28.52,0.86286,1]
["GO:0010468","regulation of gene expression",2957,300,351.02,0.99957,1,null,"GO:0006259","DNA metabolic process",468,63,86.86,0.97319,1,null,"GO:0050790","regulation of catalytic activity",172,18,29.16,0.92162,1,null,"GO:0052542","defense response by callose deposition",20,2,3.96,0.863,1]
["GO:0042180","cellular ketone metabolic process",181,13,21.49,0.99961,1,null,"GO:1905392","plant organ morphogenesis",521,73,96.69,0.97329,1,null,"GO:0009790","embryo development",711,80,120.53,0.92163,1,null,"GO:0072528","pyrimidine-containing compound biosynthetic process",38,5,7.53,0.86305,1]
["GO:0030003","intracellular monoatomic cation homeostasis",142,7,16.86,0.99962,1,null,"GO:0009955","adaxial/abaxial pattern specification",39,5,7.24,0.97521,1,null,"GO:0006402","mRNA catabolic process",104,20,17.63,0.92557,1,null,"GO:0044085","cellular component biogenesis",1396,287,276.46,0.8672,1]
["GO:0040029","epigenetic regulation of gene expression",147,13,17.45,0.99962,1,null,"GO:0000966","RNA 5'-end processing",18,1,3.34,0.97522,1,null,"GO:0045936","negative regulation of phosphate metabolic process",14,1,2.37,0.92584,1,null,"GO:0009628","response to abiotic stimulus",3381,812,669.57,0.87156,1]
["GO:0010228","vegetative to reproductive phase transition of meristem",446,26,52.94,0.99964,1,null,"GO:0016075","rRNA catabolic process",18,1,3.34,0.97522,1,null,"GO:0032506","cytokinetic process",14,1,2.37,0.92584,1,null,"GO:2000022","regulation of jasmonic acid mediated signaling pathway",30,4,5.94,0.87225,1]
["GO:2000026","regulation of multicellular organismal development",498,36,59.12,0.99973,1,null,"GO:0044089","positive regulation of cellular component biogenesis",18,1,3.34,0.97522,1,null,"GO:0006303","double-strand break repair via nonhomologous end joining",14,1,2.37,0.92584,1,null,"GO:0045037","protein import into chloroplast stroma",30,4,5.94,0.87225,1]
["GO:0048638","regulation of developmental growth",216,22,25.64,0.99987,1,null,"GO:0000463","maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)",18,1,3.34,0.97522,1,null,"GO:0000054","ribosomal subunit export from nucleus",14,1,2.37,0.92584,1,null,"GO:0019538","protein metabolic process",3150,682,623.82,0.87318,1]
["GO:0006979","response to oxidative stress",573,40,68.02,0.99988,1,null,"GO:0007129","homologous chromosome pairing at meiosis",18,1,3.34,0.97522,1,null,"GO:0006448","regulation of translational elongation",14,1,2.37,0.92584,1,null,"GO:0071482","cellular response to light stimulus",149,32,29.51,0.87657,1]
["GO:0007033","vacuole organization",72,1,8.55,0.99989,1,null,"GO:0055046","microgametogenesis",33,3,6.12,0.97525,1,null,"GO:0010588","cotyledon vascular tissue pattern formation",14,1,2.37,0.92584,1,null,"GO:0006325","chromatin organization",258,52,51.09,0.87742,1]
["GO:0009751","response to salicylic acid",291,16,34.54,0.99991,1,null,"GO:0015986","proton motive force-driven ATP synthesis",28,2,5.2,0.97656,1,null,"GO:0007292","female gamete generation",14,1,2.37,0.92584,1,null,"GO:0061157","mRNA destabilization",50,12,9.9,0.87766,1]
["GO:0016197","endosomal transport",74,1,8.78,0.99991,1,null,"GO:0046907","intracellular transport",651,83,120.82,0.97656,1,null,"GO:0009969","xyloglucan biosynthetic process",14,1,2.37,0.92584,1,null,"GO:0009785","blue light signaling pathway",17,2,3.37,0.87812,1]
["GO:0009966","regulation of signal transduction",389,39,46.18,0.99992,1,null,"GO:0006414","translational elongation",44,4,8.17,0.9766,1,null,"GO:0009938","negative regulation of gibberellic acid mediated signaling pathway",14,1,2.37,0.92584,1,null,"GO:0048598","embryonic morphogenesis",17,2,3.37,0.87812,1]
["GO:2000241","regulation of reproductive process",499,31,59.23,0.99993,1,null,"GO:0006281","DNA repair",279,34,51.78,0.97672,1,null,"GO:0070475","rRNA base methylation",14,1,2.37,0.92584,1,null,"GO:0051321","meiotic cell cycle",211,39,41.79,0.87831,1]
["GO:0006357","regulation of transcription by RNA polymerase II",302,15,35.85,0.99994,1,null,"GO:0055088","lipid homeostasis",37,3,6.87,0.978,1,null,"GO:0060341","regulation of cellular localization",29,3,4.92,0.92588,1,null,"GO:0009657","plastid organization",275,48,54.46,0.87881,1]
["GO:0006970","response to osmotic stress",900,60,106.84,0.99995,1,null,"GO:0016049","cell growth",475,80,88.15,0.97854,1,null,"GO:0031507","heterochromatin formation",37,4,6.27,0.9259,1,null,"GO:0051604","protein maturation",82,9,16.24,0.8789,1]
["GO:0010150","leaf senescence",258,14,30.63,0.99996,1,null,"GO:0048367","shoot system development",1199,199,222.52,0.97916,1,null,"GO:0048467","gynoecium development",75,7,12.71,0.92616,1,null,"GO:0042546","cell wall biogenesis",266,53,52.68,0.87963,1]
["GO:0009056","catabolic process",1879,147,223.05,0.99997,1,null,"GO:0019684","photosynthesis, light reaction",121,27,22.46,0.97959,1,null,"GO:0032875","regulation of DNA endoreduplication",32,3,5.42,0.92626,1,null,"GO:0009411","response to UV",90,23,17.82,0.88012,1]
["GO:1901565","organonitrogen compound catabolic process",959,62,113.84,0.99998,1,null,"GO:0009937","regulation of gibberellic acid mediated signaling pathway",19,1,3.53,0.97982,1,null,"GO:0019219","regulation of nucleobase-containing compound metabolic process",2319,472,393.11,0.92706,1,null,"GO:0010197","polar nucleus fusion",24,3,4.75,0.88122,1]
["GO:0016192","vesicle-mediated transport",479,21,56.86,0.99998,1,null,"GO:0000079","regulation of cyclin-dependent protein serine/threonine kinase activity",19,1,3.53,0.97982,1,null,"GO:0080111","DNA demethylation",24,2,4.07,0.93178,1,null,"GO:0000027","ribosomal large subunit assembly",24,3,4.75,0.88122,1]
["GO:0009651","response to salt stress",615,44,73,1,1,null,"GO:0031537","regulation of anthocyanin metabolic process",19,1,3.53,0.97982,1,null,"GO:0010020","chloroplast fission",24,2,4.07,0.93178,1,null,"GO:0006334","nucleosome assembly",24,3,4.75,0.88122,1]
["GO:0006511","ubiquitin-dependent protein catabolic process",401,17,47.6,1,1,null,"GO:0010229","inflorescence development",19,1,3.53,0.97982,1,null,"GO:0006284","base-excision repair",24,2,4.07,0.93178,1,null,"GO:0010020","chloroplast fission",24,3,4.75,0.88122,1]
["GO:0035556","intracellular signal transduction",353,31,41.9,1,1,null,"GO:0032508","DNA duplex unwinding",19,1,3.53,0.97982,1,null,"GO:0000387","spliceosomal snRNP assembly",24,2,4.07,0.93178,1,null,"GO:0080111","DNA demethylation",24,3,4.75,0.88122,1]
["GO:0071396","cellular response to lipid",824,74,97.81,1,1,null,"GO:0010928","regulation of auxin mediated signaling pathway",30,2,5.57,0.97985,1,null,"GO:0016125","sterol metabolic process",48,6,8.14,0.93179,1,null,"GO:1901617","organic hydroxy compound biosynthetic process",155,29,30.7,0.88831,1]
["GO:0044248","cellular catabolic process",1434,106,170.23,1,1,null,"GO:0014070","response to organic cyclic compound",542,87,100.59,0.98013,1,null,"GO:0048366","leaf development",523,106,88.66,0.93297,1,null,"GO:0010431","seed maturation",90,16,17.82,0.88833,1]
["GO:0007165","signal transduction",1906,158,226.26,1,1,null,"GO:0032543","mitochondrial translation",29,2,5.38,0.98032,1,null,"GO:0010082","regulation of root meristem growth",33,3,5.59,0.93543,1,null,"GO:0051225","spindle assembly",31,4,6.14,0.88838,1]
["GO:0042742","defense response to bacterium",798,54,94.73,1,1,null,"GO:0006890","retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum",29,2,5.38,0.98032,1,null,"GO:0008652","amino acid biosynthetic process",173,34,29.33,0.93801,1,null,"GO:0016570","histone modification",134,35,26.54,0.88916,1]
["GO:1901701","cellular response to oxygen-containing compound",1157,99,137.34,1,1,null,"GO:0034968","histone lysine methylation",38,3,7.05,0.98121,1,null,"GO:0048766","root hair initiation",15,1,2.54,0.93842,1,null,"GO:0043414","macromolecule methylation",174,41,34.46,0.88934,1]
["GO:0031347","regulation of defense response",682,45,80.96,1,1,null,"GO:0006470","protein dephosphorylation",138,23,25.61,0.98331,1,null,"GO:0009704","de-etiolation",15,1,2.54,0.93842,1,null,"GO:0010212","response to ionizing radiation",21,5,4.16,0.88988,1]
["GO:0009737","response to abscisic acid",1018,66,120.84,1,1,null,"GO:0006081","cellular aldehyde metabolic process",49,9,9.09,0.9835,1,null,"GO:0051177","meiotic sister chromatid cohesion",15,1,2.54,0.93842,1,null,"GO:0098657","import into cell",27,5,5.35,0.88999,1]
["GO:0036211","protein modification process",1901,129,225.66,1,1,null,"GO:0008284","positive regulation of cell population proliferation",20,1,3.71,0.98357,1,null,"GO:0000077","DNA damage checkpoint signaling",15,1,2.54,0.93842,1,null,"GO:0033617","mitochondrial cytochrome c oxidase assembly",10,1,1.98,0.89005,1]
["GO:0006835","dicarboxylic acid transport",15,1,1.78,1,1,null,"GO:0000466","maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)",20,1,3.71,0.98357,1,null,"GO:0043928","exonucleolytic catabolism of deadenylated mRNA",15,1,2.54,0.93842,1,null,"GO:0009768","photosynthesis, light harvesting in photosystem I",10,1,1.98,0.89005,1]
["GO:0009987","cellular process",13573,1698,1611.21,1,1,null,"GO:0006012","galactose metabolic process",20,1,3.71,0.98357,1,null,"GO:0002098","tRNA wobble uridine modification",15,1,2.54,0.93842,1,null,"GO:0007041","lysosomal transport",10,1,1.98,0.89005,1]
["GO:0061982","meiosis I cell cycle process",72,8,8.55,1,1,null,"GO:0061640","cytoskeleton-dependent cytokinesis",44,5,8.17,0.98358,1,null,"GO:0042793","plastid transcription",15,1,2.54,0.93842,1,null,"GO:0006349","regulation of gene expression by genomic imprinting",10,1,1.98,0.89005,1]
["GO:0061983","meiosis II cell cycle process",21,1,2.49,1,1,null,"GO:0048589","developmental growth",882,154,163.69,0.98505,1,null,"GO:0018205","peptidyl-lysine modification",107,6,18.14,0.93911,1,null,"GO:0061817","endoplasmic reticulum-plasma membrane tethering",10,1,1.98,0.89005,1]
["GO:0050918","positive chemotaxis",26,2,3.09,1,1,null,"GO:0031507","heterochromatin formation",31,2,5.75,0.98618,1,null,"GO:0017148","negative regulation of translation",75,12,12.71,0.94128,1,null,"GO:0010965","regulation of mitotic sister chromatid separation",10,1,1.98,0.89005,1]
["GO:0032101","regulation of response to external stimulus",203,24,24.1,1,1,null,"GO:1903008","organelle disassembly",31,2,5.75,0.98618,1,null,"GO:0030150","protein import into mitochondrial matrix",25,2,4.24,0.9414,1,null,"GO:0034475","U4 snRNA 3'-end processing",10,1,1.98,0.89005,1]
["GO:0009218","pyrimidine ribonucleotide metabolic process",27,8,3.21,1,1,null,"GO:0016192","vesicle-mediated transport",462,51,85.74,0.98619,1,null,"GO:0006282","regulation of DNA repair",25,2,4.24,0.9414,1,null,"GO:0006901","vesicle coating",10,1,1.98,0.89005,1]
["GO:0042360","vitamin E metabolic process",15,1,1.78,1,1,null,"GO:0006289","nucleotide-excision repair",40,3,7.42,0.98635,1,null,"GO:0006891","intra-Golgi vesicle-mediated transport",34,3,5.76,0.94355,1,null,"GO:0031930","mitochondria-nucleus signaling pathway",10,1,1.98,0.89005,1]
["GO:0032103","positive regulation of response to external stimulus",91,8,10.8,1,1,null,"GO:0045824","negative regulation of innate immune response",21,1,3.9,0.98662,1,null,"GO:0008380","RNA splicing",294,47,49.84,0.94822,1,null,"GO:0071577","zinc ion transmembrane transport",10,1,1.98,0.89005,1]
["GO:0032104","regulation of response to extracellular stimulus",12,3,1.42,1,1,null,"GO:0070417","cellular response to cold",21,1,3.9,0.98662,1,null,"GO:0009910","negative regulation of flower development",51,5,8.65,0.94831,1,null,"GO:0010344","seed oilbody biogenesis",10,1,1.98,0.89005,1]
["GO:0042362","fat-soluble vitamin biosynthetic process",24,1,2.85,1,1,null,"GO:0032544","plastid translation",21,1,3.9,0.98662,1,null,"GO:0009968","negative regulation of signal transduction",101,23,17.12,0.94843,1,null,"GO:0006814","sodium ion transport",10,1,1.98,0.89005,1]
["GO:0090332","stomatal closure",53,5,6.29,1,1,null,"GO:0009306","protein secretion",21,1,3.9,0.98662,1,null,"GO:0045168","cell-cell signaling involved in cell fate commitment",16,1,2.71,0.94887,1,null,"GO:0071702","organic substance transport",868,200,171.9,0.89329,1]
["GO:0097306","cellular response to alcohol",291,26,34.54,1,1,null,"GO:0007163","establishment or maintenance of cell polarity",21,1,3.9,0.98662,1,null,"GO:0009085","lysine biosynthetic process",16,1,2.71,0.94887,1,null,"GO:0015711","organic anion transport",105,25,20.79,0.89694,1]
["GO:0010467","gene expression",4265,588,506.29,1,1,null,"GO:0007186","G protein-coupled receptor signaling pathway",21,1,3.9,0.98662,1,null,"GO:0099515","actin filament-based transport",16,1,2.71,0.94887,1,null,"GO:0051050","positive regulation of transport",18,2,3.56,0.89763,1]
["GO:0051552","flavone metabolic process",18,3,2.14,1,1,null,"GO:0006006","glucose metabolic process",41,4,7.61,0.98664,1,null,"GO:0030048","actin filament-based movement",16,1,2.71,0.94887,1,null,"GO:0006744","ubiquinone biosynthetic process",18,2,3.56,0.89763,1]
["GO:0000280","nuclear division",180,15,21.37,1,1,null,"GO:0000278","mitotic cell cycle",184,14,34.15,0.98689,1,null,"GO:0010497","plasmodesmata-mediated intercellular transport",16,1,2.71,0.94887,1,null,"GO:0010496","intercellular transport",18,2,3.56,0.89763,1]
["GO:0051553","flavone biosynthetic process",17,3,2.02,1,1,null,"GO:0048507","meristem development",377,53,69.97,0.98693,1,null,"GO:0048765","root hair cell differentiation",123,18,20.85,0.94893,1,null,"GO:0010038","response to metal ion",159,30,31.49,0.89784,1]
["GO:0051554","flavonol metabolic process",18,3,2.14,1,1,null,"GO:0000904","cell morphogenesis involved in differentiation",208,38,38.6,0.98834,1,null,"GO:0006338","chromatin remodeling",127,15,21.53,0.94969,1,null,"GO:0044036","cell wall macromolecule metabolic process",113,16,22.38,0.89821,1]
["GO:0071491","cellular response to red light",13,1,1.54,1,1,null,"GO:0006897","endocytosis",73,8,13.55,0.98841,1,null,"GO:0010197","polar nucleus fusion",26,2,4.41,0.94972,1,null,"GO:0006950","response to stress",3799,834,752.35,0.90144,1]
["GO:0009914","hormone transport",110,14,13.06,1,1,null,"GO:0009790","embryo development",631,101,117.11,0.98876,1,null,"GO:0051248","negative regulation of protein metabolic process",101,14,17.12,0.94977,1,null,"GO:0048532","anatomical structure arrangement",101,18,20,0.90265,1]
["GO:0000288","nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay",33,2,3.92,1,1,null,"GO:0048586","regulation of long-day photoperiodism, flowering",22,1,4.08,0.98911,1,null,"GO:0045036","protein targeting to chloroplast",54,4,9.15,0.94992,1,null,"GO:0006487","protein N-linked glycosylation",39,5,7.72,0.90902,1]
["GO:0071495","cellular response to endogenous stimulus",1115,114,132.36,1,1,null,"GO:0034243","regulation of transcription elongation by RNA polymerase II",22,1,4.08,0.98911,1,null,"GO:0090305","nucleic acid phosphodiester bond hydrolysis",72,7,12.21,0.94993,1,null,"GO:0019637","organophosphate metabolic process",485,111,96.05,0.91046,1]
["GO:0071496","cellular response to external stimulus",203,19,24.1,1,1,null,"GO:0009958","positive gravitropism",22,1,4.08,0.98911,1,null,"GO:0010638","positive regulation of organelle organization",35,3,5.93,0.9507,1,null,"GO:0090698","post-embryonic plant morphogenesis",123,31,24.36,0.9113,1]
["GO:0035303","regulation of dephosphorylation",30,3,3.56,1,1,null,"GO:0000070","mitotic sister chromatid segregation",46,3,8.54,0.98916,1,null,"GO:0006888","endoplasmic reticulum to Golgi vesicle-mediated transport",88,11,14.92,0.95111,1,null,"GO:0032511","late endosome to vacuole transport via multivesicular body sorting pathway",25,7,4.95,0.91157,1]
["GO:0035304","regulation of protein dephosphorylation",26,3,3.09,1,1,null,"GO:0044085","cellular component biogenesis",1396,239,259.08,0.98921,1,null,"GO:0006633","fatty acid biosynthetic process",146,24,24.75,0.95281,1,null,"GO:1901000","regulation of response to salt stress",32,7,6.34,0.91168,1]
["GO:0009943","adaxial/abaxial axis specification",24,6,2.85,1,1,null,"GO:0090305","nucleic acid phosphodiester bond hydrolysis",68,3,12.62,0.98924,1,null,"GO:0015031","protein transport",516,82,87.47,0.95413,1,null,"GO:0006644","phospholipid metabolic process",170,34,33.67,0.91171,1]
["GO:0104004","cellular response to environmental stimulus",255,27,30.27,1,1,null,"GO:0006261","DNA-templated DNA replication",95,13,17.63,0.99012,1,null,"GO:0010075","regulation of meristem growth",60,5,10.17,0.95707,1,null,"GO:0009934","regulation of meristem structural organization",11,1,2.18,0.91184,1]
["GO:0098813","nuclear chromosome segregation",124,10,14.72,1,1,null,"GO:0000902","cell morphogenesis",411,62,76.28,0.99038,1,null,"GO:0010675","regulation of cellular carbohydrate metabolic process",53,9,8.98,0.95745,1,null,"GO:2000142","regulation of DNA-templated transcription initiation",11,1,2.18,0.91184,1]
["GO:0000956","nuclear-transcribed mRNA catabolic process",61,3,7.24,1,1,null,"GO:0006886","intracellular protein transport",440,60,81.66,0.99109,1,null,"GO:0045910","negative regulation of DNA recombination",17,1,2.88,0.95754,1,null,"GO:0006570","tyrosine metabolic process",11,1,2.18,0.91184,1]
["GO:1902221","erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process",18,2,2.14,1,1,null,"GO:0018345","protein palmitoylation",23,1,4.27,0.99113,1,null,"GO:0009690","cytokinin metabolic process",17,1,2.88,0.95754,1,null,"GO:0007088","regulation of mitotic nuclear division",11,1,2.18,0.91184,1]
["GO:0090304","nucleic acid metabolic process",4764,671,565.52,1,1,null,"GO:0010025","wax biosynthetic process",23,1,4.27,0.99113,1,null,"GO:0010584","pollen exine formation",17,1,2.88,0.95754,1,null,"GO:0015695","organic cation transport",11,1,2.18,0.91184,1]
["GO:1902223","erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process",11,2,1.31,1,1,null,"GO:0007015","actin filament organization",75,9,13.92,0.99116,1,null,"GO:0006298","mismatch repair",17,1,2.88,0.95754,1,null,"GO:0072530","purine-containing compound transmembrane transport",11,1,2.18,0.91184,1]
["GO:0009937","regulation of gibberellic acid mediated signaling pathway",24,2,2.85,1,1,null,"GO:0007131","reciprocal meiotic recombination",43,3,7.98,0.99161,1,null,"GO:0051347","positive regulation of transferase activity",17,1,2.88,0.95754,1,null,"GO:0052544","defense response by callose deposition in cell wall",11,1,2.18,0.91184,1]
["GO:0042325","regulation of phosphorylation",70,7,8.31,1,1,null,"GO:0006623","protein targeting to vacuole",34,2,6.31,0.99191,1,null,"GO:0006397","mRNA processing",337,55,57.13,0.95932,1,null,"GO:0010050","vegetative phase change",11,1,2.18,0.91184,1]
["GO:0042327","positive regulation of phosphorylation",13,2,1.54,1,1,null,"GO:0000911","cytokinesis by cell plate formation",52,4,9.65,0.99215,1,null,"GO:0009314","response to radiation",2075,542,351.74,0.96057,1,null,"GO:0043605","amide catabolic process",11,1,2.18,0.91184,1]
["GO:0009201","ribonucleoside triphosphate biosynthetic process",48,8,5.7,1,1,null,"GO:0000723","telomere maintenance",24,1,4.45,0.99278,1,null,"GO:1901135","carbohydrate derivative metabolic process",871,123,147.65,0.96201,1,null,"GO:0009625","response to insect",11,1,2.18,0.91184,1]
["GO:0050790","regulation of catalytic activity",172,24,20.42,1,1,null,"GO:0048364","root development",689,103,127.87,0.99308,1,null,"GO:0045595","regulation of cell differentiation",37,3,6.27,0.96255,1,null,"GO:0009616","RNAi-mediated antiviral immune response",11,1,2.18,0.91184,1]
["GO:0009205","purine ribonucleoside triphosphate metabolic process",90,9,10.68,1,1,null,"GO:1903046","meiotic cell cycle process",192,16,35.63,0.99312,1,null,"GO:0090627","plant epidermal cell differentiation",195,28,33.06,0.96267,1,null,"GO:1900376","regulation of secondary metabolite biosynthetic process",11,1,2.18,0.91184,1]
["GO:0050794","regulation of cellular process",4717,494,559.94,1,1,null,"GO:0009933","meristem structural organization",69,9,12.81,0.99435,1,null,"GO:0061640","cytoskeleton-dependent cytokinesis",60,8,10.17,0.96306,1,null,"GO:0031118","rRNA pseudouridine synthesis",11,1,2.18,0.91184,1]
["GO:0009208","pyrimidine ribonucleoside triphosphate metabolic process",17,4,2.02,1,1,null,"GO:0000462","maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)",36,2,6.68,0.99436,1,null,"GO:0045037","protein import into chloroplast stroma",28,2,4.75,0.96309,1,null,"GO:0031145","anaphase-promoting complex-dependent catabolic process",11,1,2.18,0.91184,1]
["GO:0009209","pyrimidine ribonucleoside triphosphate biosynthetic process",17,4,2.02,1,1,null,"GO:0006612","protein targeting to membrane",65,6,12.06,0.99438,1,null,"GO:0009956","radial pattern formation",28,2,4.75,0.96309,1,null,"GO:0006222","UMP biosynthetic process",11,1,2.18,0.91184,1]
["GO:0006595","polyamine metabolic process",23,1,2.73,1,1,null,"GO:0009734","auxin-activated signaling pathway",76,5,14.1,0.99494,1,null,"GO:0000226","microtubule cytoskeleton organization",175,21,29.67,0.96397,1,null,"GO:1902456","regulation of stomatal opening",11,1,2.18,0.91184,1]
["GO:2000112","regulation of cellular macromolecule biosynthetic process",147,19,17.45,1,1,null,"GO:1901698","response to nitrogen compound",191,37,35.45,0.99516,1,null,"GO:0031060","regulation of histone methylation",18,1,3.05,0.96475,1,null,"GO:0044772","mitotic cell cycle phase transition",48,8,9.51,0.91186,1]
["GO:0071462","cellular response to water stimulus",31,3,3.68,1,1,null,"GO:0030258","lipid modification",76,13,14.1,0.99519,1,null,"GO:0008360","regulation of cell shape",18,1,3.05,0.96475,1,null,"GO:0046283","anthocyanin-containing compound metabolic process",43,7,8.52,0.91186,1]
["GO:1901800","positive regulation of proteasomal protein catabolic process",23,3,2.73,1,1,null,"GO:0016073","snRNA metabolic process",26,1,4.83,0.99522,1,null,"GO:0048449","floral organ formation",18,1,3.05,0.96475,1,null,"GO:0043254","regulation of protein-containing complex assembly",30,4,5.94,0.9119,1]
["GO:2000113","negative regulation of cellular macromolecule biosynthetic process",78,5,9.26,1,1,null,"GO:0051726","regulation of cell cycle",163,14,30.25,0.99534,1,null,"GO:0052324","plant-type cell wall cellulose biosynthetic process",18,1,3.05,0.96475,1,null,"GO:0010383","cell wall polysaccharide metabolic process",85,14,16.83,0.91197,1]
["GO:0002239","response to oomycetes",63,4,7.48,1,1,null,"GO:0009059","macromolecule biosynthetic process",3209,468,595.55,0.99561,1,null,"GO:0065004","protein-DNA complex assembly",64,8,10.85,0.96478,1,null,"GO:0000028","ribosomal small subunit assembly",26,3,5.15,0.91245,1]
["GO:0009095","aromatic amino acid family biosynthetic process, prephenate pathway",13,2,1.54,1,1,null,"GO:1901566","organonitrogen compound biosynthetic process",1560,223,289.52,0.99562,1,null,"GO:0019827","stem cell population maintenance",83,10,14.07,0.96484,1,null,"GO:0006383","transcription by RNA polymerase III",26,3,5.15,0.91245,1]
["GO:0010410","hemicellulose metabolic process",70,16,8.31,1,1,null,"GO:0006606","protein import into nucleus",47,3,8.72,0.99567,1,null,"GO:0033044","regulation of chromosome organization",43,2,7.29,0.96489,1,null,"GO:0043650","dicarboxylic acid biosynthetic process",26,3,5.15,0.91245,1]
["GO:0071453","cellular response to oxygen levels",203,29,24.1,1,1,null,"GO:0032786","positive regulation of DNA-templated transcription, elongation",27,1,5.01,0.99611,1,null,"GO:0030154","cell differentiation",987,143,167.31,0.96531,1,null,"GO:0007093","mitotic cell cycle checkpoint signaling",19,2,3.76,0.9142,1]
["GO:0045859","regulation of protein kinase activity",52,5,6.17,1,1,null,"GO:1902600","proton transmembrane transport",27,1,5.01,0.99611,1,null,"GO:0044087","regulation of cellular component biogenesis",96,14,16.27,0.96839,1,null,"GO:0072523","purine-containing compound catabolic process",19,2,3.76,0.9142,1]
["GO:1905421","regulation of plant organ morphogenesis",37,2,4.39,1,1,null,"GO:0090627","plant epidermal cell differentiation",141,19,26.17,0.99613,1,null,"GO:0006506","GPI anchor biosynthetic process",29,2,4.92,0.96843,1,null,"GO:0006284","base-excision repair",19,2,3.76,0.9142,1]
["GO:0042330","taxis",26,2,3.09,1,1,null,"GO:0010374","stomatal complex development",41,2,7.61,0.99684,1,null,"GO:0071555","cell wall organization",218,35,36.95,0.97072,1,null,"GO:0000103","sulfate assimilation",19,2,3.76,0.9142,1]
["GO:0071489","cellular response to red or far red light",57,7,6.77,1,1,null,"GO:0006325","chromatin organization",258,46,47.88,0.99686,1,null,"GO:0010223","secondary shoot formation",19,1,3.22,0.97073,1,null,"GO:0019252","starch biosynthetic process",33,4,6.54,0.91537,1]
["GO:0048856","anatomical structure development",4822,632,572.41,1,1,null,"GO:0016579","protein deubiquitination",67,5,12.43,0.99711,1,null,"GO:2000024","regulation of leaf development",19,1,3.22,0.97073,1,null,"GO:0019722","calcium-mediated signaling",33,4,6.54,0.91537,1]
["GO:0016050","vesicle organization",99,3,11.75,1,1,null,"GO:0006906","vesicle fusion",40,2,7.42,0.99728,1,null,"GO:0007018","microtubule-based movement",56,5,9.49,0.97133,1,null,"GO:0030154","cell differentiation",791,156,156.65,0.91644,1]
["GO:0016052","carbohydrate catabolic process",148,27,17.57,1,1,null,"GO:0000226","microtubule cytoskeleton organization",134,13,24.87,0.99733,1,null,"GO:0016573","histone acetylation",39,3,6.61,0.97167,1,null,"GO:0030163","protein catabolic process",506,120,100.21,0.91812,1]
["GO:0016054","organic acid catabolic process",156,21,18.52,1,1,null,"GO:0009755","hormone-mediated signaling pathway",748,119,138.82,0.99754,1,null,"GO:0045490","pectin catabolic process",39,3,6.61,0.97167,1,null,"GO:0009408","response to heat",321,57,63.57,0.91849,1]
["GO:0009798","axis specification",43,8,5.1,1,1,null,"GO:0006355","regulation of DNA-templated transcription",1393,224,258.52,0.99794,1,null,"GO:0071554","cell wall organization or biogenesis",750,109,127.14,0.97384,1,null,"GO:0000724","double-strand break repair via homologous recombination",65,9,12.87,0.91896,1]
["GO:0009064","glutamine family amino acid metabolic process",58,11,6.89,1,1,null,"GO:0010468","regulation of gene expression",2563,399,475.66,0.99803,1,null,"GO:0006351","DNA-templated transcription",1935,404,328.01,0.97395,1,null,"GO:0006778","porphyrin-containing compound metabolic process",225,47,44.56,0.92452,1]
["GO:0009067","aspartate family amino acid biosynthetic process",44,7,5.22,1,1,null,"GO:0018193","peptidyl-amino acid modification",233,19,43.24,0.99825,1,null,"GO:0010015","root morphogenesis",523,75,88.66,0.9747,1,null,"GO:0048638","regulation of developmental growth",211,40,41.79,0.92592,1]
["GO:0009069","serine family amino acid metabolic process",53,11,6.29,1,1,null,"GO:0006891","intra-Golgi vesicle-mediated transport",32,1,5.94,0.99861,1,null,"GO:0006525","arginine metabolic process",20,1,3.39,0.9757,1,null,"GO:0034599","cellular response to oxidative stress",64,11,12.67,0.9264,1]
["GO:0006551","leucine metabolic process",21,2,2.49,1,1,null,"GO:0048585","negative regulation of response to stimulus",198,29,36.75,0.99862,1,null,"GO:0006614","SRP-dependent cotranslational protein targeting to membrane",20,1,3.39,0.9757,1,null,"GO:0007018","microtubule-based movement",34,4,6.73,0.92654,1]
["GO:0006553","lysine metabolic process",18,3,2.14,1,1,null,"GO:0006397","mRNA processing",338,61,62.73,0.9987,1,null,"GO:0009944","polarity specification of adaxial/abaxial axis",20,1,3.39,0.9757,1,null,"GO:0032436","positive regulation of proteasomal ubiquitin-dependent protein catabolic process",20,2,3.96,0.92822,1]
["GO:0032272","negative regulation of protein polymerization",12,1,1.42,1,1,null,"GO:0010638","positive regulation of organelle organization",33,1,6.12,0.99887,1,null,"GO:0009742","brassinosteroid mediated signaling pathway",64,6,10.85,0.97602,1,null,"GO:0007267","cell-cell signaling",20,2,3.96,0.92822,1]
["GO:0006558","L-phenylalanine metabolic process",18,2,2.14,1,1,null,"GO:2000377","regulation of reactive oxygen species metabolic process",47,2,8.72,0.99925,1,null,"GO:0000278","mitotic cell cycle",257,25,43.57,0.97678,1,null,"GO:0048831","regulation of shoot system development",146,42,28.91,0.92826,1]
["GO:0032950","regulation of beta-glucan metabolic process",19,2,2.26,1,1,null,"GO:0006418","tRNA aminoacylation for protein translation",47,2,8.72,0.99925,1,null,"GO:0048510","regulation of timing of transition from vegetative to reproductive phase",31,2,5.25,0.97695,1,null,"GO:0030422","siRNA processing",35,4,6.93,0.92832,1]
["GO:0032951","regulation of beta-glucan biosynthetic process",19,2,2.26,1,1,null,"GO:0048366","leaf development",444,88,82.4,0.99927,1,null,"GO:0006259","DNA metabolic process",556,39,94.25,0.9791,1,null,"GO:0006401","RNA catabolic process",123,32,24.36,0.92866,1]
["GO:0072593","reactive oxygen species metabolic process",117,6,13.89,1,1,null,"GO:0006400","tRNA modification",71,3,13.18,0.99971,1,null,"GO:1905392","plant organ morphogenesis",737,94,124.93,0.97955,1,null,"GO:0034655","nucleobase-containing compound catabolic process",149,35,29.51,0.92881,1]
["GO:0030258","lipid modification",86,12,10.21,1,1,null,"GO:0031123","RNA 3'-end processing",74,5,13.73,0.99978,1,null,"GO:0010074","maintenance of meristem identity",65,9,11.02,0.97981,1,null,"GO:0090615","mitochondrial mRNA processing",12,1,2.38,0.92931,1]
["GO:0072594","establishment of protein localization to organelle",253,36,30.03,1,1,null,"GO:0035556","intracellular signal transduction",307,40,56.98,0.99982,1,null,"GO:2000067","regulation of root morphogenesis",21,1,3.56,0.97982,1,null,"GO:0032958","inositol phosphate biosynthetic process",12,1,2.38,0.92931,1]
["GO:0072596","establishment of protein localization to chloroplast",54,12,6.41,1,1,null,"GO:0010016","shoot system morphogenesis",167,19,30.99,0.99987,1,null,"GO:0006465","signal peptide processing",21,1,3.56,0.97982,1,null,"GO:0006521","regulation of cellular amino acid metabolic process",12,1,2.38,0.92931,1]
["GO:0072598","protein localization to chloroplast",54,12,6.41,1,1,null,"GO:0006468","protein phosphorylation",666,81,123.6,0.99991,1,null,"GO:0009306","protein secretion",21,1,3.56,0.97982,1,null,"GO:0009861","jasmonic acid and ethylene-dependent systemic resistance",12,1,2.38,0.92931,1]
["GO:0016072","rRNA metabolic process",249,72,29.56,1,1,null,"GO:0051301","cell division",404,42,74.98,0.99997,1,null,"GO:0031123","RNA 3'-end processing",76,7,12.88,0.97992,1,null,"GO:1901679","nucleotide transmembrane transport",12,1,2.38,0.92931,1]
["GO:0072599","establishment of protein localization to endoplasmic reticulum",37,6,4.39,1,1,null,"GO:0043414","macromolecule methylation",174,12,32.29,0.99999,1,null,"GO:0022412","cellular process involved in reproduction in multicellular organism",47,5,7.97,0.98031,1,null,"GO:0006301","postreplication repair",12,1,2.38,0.92931,1]
["GO:0016074","sno(s)RNA metabolic process",16,2,1.9,1,1,null,"GO:0016070","RNA metabolic process",3871,551,718.41,0.99999,1,null,"GO:0006890","retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum",32,2,5.42,0.98033,1,null,"GO:0006493","protein O-linked glycosylation",12,1,2.38,0.92931,1]
["GO:0009081","branched-chain amino acid metabolic process",43,4,5.1,1,1,null,"GO:0019219","regulation of nucleobase-containing compound metabolic process",1938,298,359.67,1,1,null,"GO:0042254","ribosome biogenesis",330,18,55.94,0.98087,1,null,"GO:0048363","mucilage pectin metabolic process",12,1,2.38,0.92931,1]
["GO:0006586","indolalkylamine metabolic process",48,11,5.7,1,1,null,"GO:0006412","translation",562,55,104.3,1,1,null,"GO:0016197","endosomal transport",74,12,12.54,0.98136,1,null,"GO:0055070","copper ion homeostasis",12,1,2.38,0.92931,1]
["GO:0050789","regulation of biological process",6244,625,741.21,1,1,null,"GO:0006364","rRNA processing",233,13,43.24,1,1,null,"GO:0090351","seedling development",197,42,33.39,0.98295,1,null,"GO:0055071","manganese ion homeostasis",12,1,2.38,0.92931,1]
["GO:0009082","branched-chain amino acid biosynthetic process",20,2,2.37,1,1,null,"GO:0009451","RNA modification",352,26,65.33,1,1,null,"GO:0048364","root development",964,136,163.41,0.98311,1,null,"GO:0010206","photosystem II repair",12,1,2.38,0.92931,1]
["GO:0035459","vesicle cargo loading",12,1,1.42,1,1,null,"GO:0046112","nucleobase biosynthetic process",18,1,3.34,1,1,null,"GO:0010099","regulation of photomorphogenesis",37,6,6.27,0.98318,1,null,"GO:0032365","intracellular lipid transport",12,1,2.38,0.92931,1]
["GO:0009085","lysine biosynthetic process",16,3,1.9,1,1,null,"GO:0006839","mitochondrial transport",58,10,10.76,1,1,null,"GO:0032544","plastid translation",22,1,3.73,0.98325,1,null,"GO:0000303","response to superoxide",12,1,2.38,0.92931,1]
["GO:0032984","protein-containing complex disassembly",68,3,8.07,1,1,null,"GO:0009987","cellular process",11622,2035,2156.91,1,1,null,"GO:0007163","establishment or maintenance of cell polarity",22,1,3.73,0.98325,1,null,"GO:0051784","negative regulation of nuclear division",12,1,2.38,0.92931,1]
["GO:0140527","reciprocal homologous recombination",57,7,6.77,1,1,null,"GO:0061982","meiosis I cell cycle process",56,3,10.39,1,1,null,"GO:0030422","siRNA processing",37,3,6.27,0.98326,1,null,"GO:0019375","galactolipid biosynthetic process",12,1,2.38,0.92931,1]
["GO:0000096","sulfur amino acid metabolic process",57,9,6.77,1,1,null,"GO:0061983","meiosis II cell cycle process",13,1,2.41,1,1,null,"GO:0010214","seed coat development",44,4,7.46,0.98327,1,null,"GO:0002182","cytoplasmic translational elongation",12,1,2.38,0.92931,1]
["GO:0000097","sulfur amino acid biosynthetic process",39,8,4.63,1,1,null,"GO:0050918","positive chemotaxis",29,6,5.38,1,1,null,"GO:0006414","translational elongation",47,3,7.97,0.98327,1,null,"GO:0006882","intracellular zinc ion homeostasis",12,1,2.38,0.92931,1]
["GO:0009765","photosynthesis, light harvesting",39,1,4.63,1,1,null,"GO:0032101","regulation of response to external stimulus",167,30,30.99,1,1,null,"GO:0043094","cellular metabolic compound salvage",78,14,13.22,0.98601,1,null,"GO:0045010","actin nucleation",24,3,4.75,0.92934,1]
["GO:0032989","cellular component morphogenesis",29,3,3.44,1,1,null,"GO:0009218","pyrimidine ribonucleotide metabolic process",25,2,4.64,1,1,null,"GO:1900426","positive regulation of defense response to bacterium",23,1,3.9,0.98609,1,null,"GO:0006563","L-serine metabolic process",25,3,4.95,0.92935,1]
["GO:0050776","regulation of immune response",106,12,12.58,1,1,null,"GO:0007276","gamete generation",48,7,8.91,1,1,null,"GO:0000027","ribosomal large subunit assembly",23,1,3.9,0.98609,1,null,"GO:1990748","cellular detoxification",33,3,6.54,0.92946,1]
["GO:0050777","negative regulation of immune response",26,5,3.09,1,1,null,"GO:0042360","vitamin E metabolic process",13,1,2.41,1,1,null,"GO:0009116","nucleoside metabolic process",23,1,3.9,0.98609,1,null,"GO:1901137","carbohydrate derivative biosynthetic process",403,57,79.81,0.93268,1]
["GO:0050778","positive regulation of immune response",57,6,6.77,1,1,null,"GO:0032104","regulation of response to extracellular stimulus",11,2,2.04,1,1,null,"GO:0065002","intracellular protein transmembrane transport",87,10,14.75,0.98613,1,null,"GO:0030968","endoplasmic reticulum unfolded protein response",28,3,5.55,0.93603,1]
["GO:0006576","biogenic amine metabolic process",77,13,9.14,1,1,null,"GO:0009240","isopentenyl diphosphate biosynthetic process",19,1,3.53,1,1,null,"GO:0051321","meiotic cell cycle",292,22,49.5,0.98664,1,null,"GO:0009767","photosynthetic electron transport chain",35,4,6.93,0.93636,1]
["GO:0050779","RNA destabilization",50,2,5.94,1,1,null,"GO:0090626","plant epidermis morphogenesis",68,6,12.62,1,1,null,"GO:0048437","floral organ development",200,26,33.9,0.98793,1,null,"GO:0048437","floral organ development",165,35,32.68,0.93968,1]
["GO:1902099","regulation of metaphase/anaphase transition of cell cycle",17,2,2.02,1,1,null,"GO:0097306","cellular response to alcohol",256,60,47.51,1,1,null,"GO:0098655","monoatomic cation transmembrane transport",145,34,24.58,0.9882,1,null,"GO:0045926","negative regulation of growth",21,2,4.16,0.94006,1]
["GO:0009073","aromatic amino acid family biosynthetic process",45,8,5.34,1,1,null,"GO:0098876","vesicle-mediated transport to the plasma membrane",30,3,5.57,1,1,null,"GO:0098662","inorganic cation transmembrane transport",146,34,24.75,0.98821,1,null,"GO:0007186","G protein-coupled receptor signaling pathway",21,2,4.16,0.94006,1]
["GO:0007051","spindle organization",63,1,7.48,1,1,null,"GO:0010467","gene expression",3838,551,712.29,1,1,null,"GO:0051054","positive regulation of DNA metabolic process",24,1,4.07,0.98845,1,null,"GO:0098869","cellular oxidant detoxification",21,2,4.16,0.94006,1]
["GO:0045841","negative regulation of mitotic metaphase/anaphase transition",10,1,1.19,1,1,null,"GO:0006801","superoxide metabolic process",13,4,2.41,1,1,null,"GO:1901259","chloroplast rRNA processing",24,1,4.07,0.98845,1,null,"GO:0022622","root system development",702,173,139.02,0.94096,1]
["GO:0032970","regulation of actin filament-based process",34,5,4.04,1,1,null,"GO:0000281","mitotic cytokinesis",24,4,4.45,1,1,null,"GO:0009740","gibberellic acid mediated signaling pathway",48,5,8.14,0.98845,1,null,"GO:0010053","root epidermal cell differentiation",114,23,22.58,0.94319,1]
["GO:1901564","organonitrogen compound metabolic process",4995,605,592.94,1,1,null,"GO:0009914","hormone transport",95,12,17.63,1,1,null,"GO:0009965","leaf morphogenesis",103,10,17.46,0.9887,1,null,"GO:0065004","protein-DNA complex assembly",59,11,11.68,0.94326,1]
["GO:0010404","cell wall hydroxyproline-rich glycoprotein metabolic process",12,1,1.42,1,1,null,"GO:0000288","nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay",33,3,6.12,1,1,null,"GO:0070542","response to fatty acid",565,142,95.78,0.98952,1,null,"GO:0048440","carpel development",53,9,10.5,0.94331,1]
["GO:0070592","cell wall polysaccharide biosynthetic process",74,8,8.78,1,1,null,"GO:0071495","cellular response to endogenous stimulus",931,160,172.78,1,1,null,"GO:0001708","cell fate specification",36,2,6.1,0.98964,1,null,"GO:0090068","positive regulation of cell cycle process",23,3,4.55,0.94332,1]
["GO:1901568","fatty acid derivative metabolic process",43,5,5.1,1,1,null,"GO:0061919","process utilizing autophagic mechanism",80,13,14.85,1,1,null,"GO:0051225","spindle assembly",46,3,7.8,0.98966,1,null,"GO:0010363","regulation of plant-type hypersensitive response",23,3,4.55,0.94332,1]
["GO:0009756","carbohydrate mediated signaling",39,4,4.63,1,1,null,"GO:0035303","regulation of dephosphorylation",31,6,5.75,1,1,null,"GO:0070727","cellular macromolecule localization",718,112,121.71,0.98978,1,null,"GO:0016024","CDP-diacylglycerol biosynthetic process",13,1,2.57,0.94332,1]
["GO:0044260","cellular macromolecule metabolic process",2189,362,259.85,1,1,null,"GO:0104004","cellular response to environmental stimulus",215,48,39.9,1,1,null,"GO:0048507","meristem development",504,60,85.44,0.98978,1,null,"GO:0006526","arginine biosynthetic process",13,1,2.57,0.94332,1]
["GO:0045833","negative regulation of lipid metabolic process",12,2,1.42,1,1,null,"GO:0098813","nuclear chromosome segregation",91,5,16.89,1,1,null,"GO:0010088","phloem development",25,1,4.24,0.99041,1,null,"GO:0030071","regulation of mitotic metaphase/anaphase transition",13,1,2.57,0.94332,1]
["GO:0045834","positive regulation of lipid metabolic process",32,3,3.8,1,1,null,"GO:0000956","nuclear-transcribed mRNA catabolic process",61,4,11.32,1,1,null,"GO:0032981","mitochondrial respiratory chain complex I assembly",25,1,4.24,0.99041,1,null,"GO:0048354","mucilage biosynthetic process involved in seed coat development",13,1,2.57,0.94332,1]
["GO:0044264","cellular polysaccharide metabolic process",260,35,30.86,1,1,null,"GO:1902221","erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process",15,2,2.78,1,1,null,"GO:0018193","peptidyl-amino acid modification",254,25,43.06,0.99066,1,null,"GO:0006448","regulation of translational elongation",13,1,2.57,0.94332,1]
["GO:0140546","defense response to symbiont",57,4,6.77,1,1,null,"GO:0090304","nucleic acid metabolic process",4232,602,785.41,1,1,null,"GO:0040007","growth",1360,210,230.54,0.99073,1,null,"GO:0046688","response to copper ion",13,1,2.57,0.94332,1]
["GO:1902903","regulation of supramolecular fiber organization",30,4,3.56,1,1,null,"GO:0042325","regulation of phosphorylation",45,3,8.35,1,1,null,"GO:0019684","photosynthesis, light reaction",164,51,27.8,0.99164,1,null,"GO:0045489","pectin biosynthetic process",49,7,9.7,0.94493,1]
["GO:1902904","negative regulation of supramolecular fiber organization",14,1,1.66,1,1,null,"GO:0042327","positive regulation of phosphorylation",11,1,2.04,1,1,null,"GO:0008356","asymmetric cell division",26,1,4.41,0.99204,1,null,"GO:0016114","terpenoid biosynthetic process",105,16,20.79,0.94516,1]
["GO:0016043","cellular component organization",2464,335,292.49,1,1,null,"GO:0009201","ribonucleoside triphosphate biosynthetic process",45,3,8.35,1,1,null,"GO:0016073","snRNA metabolic process",26,1,4.41,0.99204,1,null,"GO:0000045","autophagosome assembly",29,3,5.74,0.94548,1]
["GO:0062197","cellular response to chemical stress",115,14,13.65,1,1,null,"GO:0010476","gibberellin mediated signaling pathway",39,4,7.24,1,1,null,"GO:0006997","nucleus organization",52,3,8.81,0.99207,1,null,"GO:0043086","negative regulation of catalytic activity",29,3,5.74,0.94548,1]
["GO:0061013","regulation of mRNA catabolic process",63,3,7.48,1,1,null,"GO:0009205","purine ribonucleoside triphosphate metabolic process",81,8,15.03,1,1,null,"GO:0006302","double-strand break repair",128,4,21.7,0.99225,1,null,"GO:0006633","fatty acid biosynthetic process",106,16,20.99,0.94568,1]
["GO:0061014","positive regulation of mRNA catabolic process",53,2,6.29,1,1,null,"GO:0009206","purine ribonucleoside triphosphate biosynthetic process",36,2,6.68,1,1,null,"GO:0007049","cell cycle",780,64,132.22,0.99322,1,null,"GO:0019761","glucosinolate biosynthetic process",50,6,9.9,0.9489,1]
["GO:0002764","immune response-regulating signaling pathway",32,4,3.8,1,1,null,"GO:0009208","pyrimidine ribonucleoside triphosphate metabolic process",15,1,2.78,1,1,null,"GO:0051205","protein insertion into membrane",27,1,4.58,0.99339,1,null,"GO:0090305","nucleic acid phosphodiester bond hydrolysis",68,16,13.47,0.94966,1]
["GO:0006544","glycine metabolic process",17,4,2.02,1,1,null,"GO:0009209","pyrimidine ribonucleoside triphosphate biosynthetic process",15,1,2.78,1,1,null,"GO:0000028","ribosomal small subunit assembly",27,1,4.58,0.99339,1,null,"GO:0000070","mitotic sister chromatid segregation",46,9,9.11,0.94986,1]
["GO:0097435","supramolecular fiber organization",154,10,18.28,1,1,null,"GO:0035601","protein deacylation",11,3,2.04,1,1,null,"GO:0007129","homologous chromosome pairing at meiosis",27,1,4.58,0.99339,1,null,"GO:0009645","response to low light intensity stimulus",22,2,4.36,0.95003,1]
["GO:0030243","cellulose metabolic process",63,5,7.48,1,1,null,"GO:2000112","regulation of cellular macromolecule biosynthetic process",141,13,26.17,1,1,null,"GO:0000373","Group II intron splicing",27,1,4.58,0.99339,1,null,"GO:0006812","monoatomic cation transport",187,41,37.03,0.95424,1]
["GO:0010191","mucilage metabolic process",33,6,3.92,1,1,null,"GO:0071462","cellular response to water stimulus",22,4,4.08,1,1,null,"GO:0006306","DNA methylation",46,3,7.8,0.99341,1,null,"GO:0044281","small molecule metabolic process",2194,466,434.5,0.95433,1]
["GO:0006549","isoleucine metabolic process",11,1,1.31,1,1,null,"GO:1901800","positive regulation of proteasomal protein catabolic process",22,4,4.08,1,1,null,"GO:0044092","negative regulation of molecular function",39,2,6.61,0.99364,1,null,"GO:0000723","telomere maintenance",24,3,4.75,0.95455,1]
["GO:0009725","response to hormone",2227,231,264.36,1,1,null,"GO:2000113","negative regulation of cellular macromolecule biosynthetic process",76,7,14.1,1,1,null,"GO:0048229","gametophyte development",406,61,68.82,0.99369,1,null,"GO:0048564","photosystem I assembly",14,1,2.77,0.95455,1]
["GO:0002757","immune response-activating signaling pathway",32,4,3.8,1,1,null,"GO:0045862","positive regulation of proteolysis",28,5,5.2,1,1,null,"GO:0016049","cell growth",563,90,95.44,0.99438,1,null,"GO:0044804","autophagy of nucleus",14,1,2.77,0.95455,1]
["GO:0023051","regulation of signaling",396,39,47.01,1,1,null,"GO:0071450","cellular response to oxygen radical",10,4,1.86,1,1,null,"GO:0048646","anatomical structure formation involved in morphogenesis",215,27,36.45,0.99535,1,null,"GO:0031408","oxylipin biosynthetic process",14,1,2.77,0.95455,1]
["GO:1903409","reactive oxygen species biosynthetic process",27,1,3.21,1,1,null,"GO:0071451","cellular response to superoxide",10,4,1.86,1,1,null,"GO:0032543","mitochondrial translation",29,1,4.92,0.99544,1,null,"GO:0043173","nucleotide salvage",14,1,2.77,0.95455,1]
["GO:0023056","positive regulation of signaling",83,12,9.85,1,1,null,"GO:0010410","hemicellulose metabolic process",40,11,7.42,1,1,null,"GO:0010051","xylem and phloem pattern formation",80,3,13.56,0.99548,1,null,"GO:0046417","chorismate metabolic process",14,1,2.77,0.95455,1]
["GO:0023057","negative regulation of signaling",102,12,12.11,1,1,null,"GO:0071453","cellular response to oxygen levels",168,43,31.18,1,1,null,"GO:0000911","cytokinesis by cell plate formation",66,5,11.19,0.99578,1,null,"GO:1901663","quinone biosynthetic process",32,3,6.34,0.95464,1]
["GO:0046217","indole phytoalexin metabolic process",17,7,2.02,1,1,null,"GO:0042330","taxis",29,6,5.38,1,1,null,"GO:0044271","cellular nitrogen compound biosynthetic process",3399,579,576.18,0.99613,1,null,"GO:0009059","macromolecule biosynthetic process",3209,727,635.5,0.95541,1]
["GO:0046219","indolalkylamine biosynthetic process",20,6,2.37,1,1,null,"GO:0009791","post-embryonic development",2024,365,375.63,1,1,null,"GO:0010374","stomatal complex development",80,6,13.56,0.99614,1,null,"GO:0006457","protein folding",172,25,34.06,0.95817,1]
["GO:0000086","G2/M transition of mitotic cell cycle",29,4,3.44,1,1,null,"GO:0071489","cellular response to red or far red light",49,11,9.09,1,1,null,"GO:0009411","response to UV",111,24,18.82,0.99614,1,null,"GO:0009567","double fertilization forming a zygote and endosperm",23,2,4.55,0.9584,1]
["GO:0032200","telomere organization",31,4,3.68,1,1,null,"GO:0048856","anatomical structure development",3961,694,735.12,1,1,null,"GO:0000904","cell morphogenesis involved in differentiation",224,36,37.97,0.9962,1,null,"GO:0071897","DNA biosynthetic process",23,2,4.55,0.9584,1]
["GO:0009719","response to endogenous stimulus",2245,233,266.5,1,1,null,"GO:0016052","carbohydrate catabolic process",129,24,23.94,1,1,null,"GO:0080156","mitochondrial mRNA modification",30,1,5.09,0.99622,1,null,"GO:0006040","amino sugar metabolic process",23,2,4.55,0.9584,1]
["GO:0018393","internal peptidyl-lysine acetylation",39,3,4.63,1,1,null,"GO:0016054","organic acid catabolic process",137,40,25.43,1,1,null,"GO:0000723","telomere maintenance",30,1,5.09,0.99622,1,null,"GO:0006820","monoatomic anion transport",23,2,4.55,0.9584,1]
["GO:0035437","maintenance of protein localization in endoplasmic reticulum",11,1,1.31,1,1,null,"GO:0009798","axis specification",38,6,7.05,1,1,null,"GO:0010305","leaf vascular tissue pattern formation",31,1,5.25,0.99686,1,null,"GO:0007015","actin filament organization",75,11,14.85,0.95848,1]
["GO:0018394","peptidyl-lysine acetylation",39,3,4.63,1,1,null,"GO:0009064","glutamine family amino acid metabolic process",51,16,9.47,1,1,null,"GO:0000902","cell morphogenesis",494,73,83.74,0.99736,1,null,"GO:0048229","gametophyte development",348,93,68.92,0.9585,1]
["GO:0072521","purine-containing compound metabolic process",255,28,30.27,1,1,null,"GO:0009067","aspartate family amino acid biosynthetic process",40,10,7.42,1,1,null,"GO:0052546","cell wall pectin metabolic process",32,1,5.42,0.99739,1,null,"GO:0000911","cytokinesis by cell plate formation",52,10,10.3,0.95881,1]
["GO:0072522","purine-containing compound biosynthetic process",120,18,14.24,1,1,null,"GO:0009069","serine family amino acid metabolic process",45,10,8.35,1,1,null,"GO:0034968","histone lysine methylation",43,2,7.29,0.99784,1,null,"GO:1901606","alpha-amino acid catabolic process",64,11,12.67,0.95893,1]
["GO:0072524","pyridine-containing compound metabolic process",66,5,7.83,1,1,null,"GO:0002097","tRNA wobble base modification",19,1,3.53,1,1,null,"GO:0007131","reciprocal meiotic recombination",57,3,9.66,0.99803,1,null,"GO:0019748","secondary metabolic process",370,73,73.27,0.95939,1]
["GO:0072525","pyridine-containing compound biosynthetic process",21,1,2.49,1,1,null,"GO:0032271","regulation of protein polymerization",19,4,3.53,1,1,null,"GO:0051726","regulation of cell cycle",232,18,39.33,0.9981,1,null,"GO:0006508","proteolysis",623,140,123.38,0.95991,1]
["GO:0000075","cell cycle checkpoint signaling",40,8,4.75,1,1,null,"GO:0006553","lysine metabolic process",17,3,3.16,1,1,null,"GO:0006418","tRNA aminoacylation for protein translation",47,2,7.97,0.9983,1,null,"GO:0080156","mitochondrial mRNA modification",31,3,6.14,0.9606,1]
["GO:0009743","response to carbohydrate",182,28,21.6,1,1,null,"GO:0032950","regulation of beta-glucan metabolic process",18,1,3.34,1,1,null,"GO:0051604","protein maturation",93,9,15.76,0.99852,1,null,"GO:0006558","L-phenylalanine metabolic process",15,1,2.97,0.96356,1]
["GO:0070585","protein localization to mitochondrion",54,14,6.41,1,1,null,"GO:0048871","multicellular organismal-level homeostasis",25,6,4.64,1,1,null,"GO:0010073","meristem maintenance",203,19,34.41,0.99856,1,null,"GO:0050829","defense response to Gram-negative bacterium",15,1,2.97,0.96356,1]
["GO:0009746","response to hexose",70,10,8.31,1,1,null,"GO:0032951","regulation of beta-glucan biosynthetic process",18,1,3.34,1,1,null,"GO:0051302","regulation of cell division",62,4,10.51,0.99857,1,null,"GO:0010088","phloem development",15,1,2.97,0.96356,1]
["GO:1902075","cellular response to salt",51,3,6.05,1,1,null,"GO:0072594","establishment of protein localization to organelle",252,39,46.77,1,1,null,"GO:0009834","plant-type secondary cell wall biogenesis",73,6,12.37,0.99879,1,null,"GO:0010109","regulation of photosynthesis",43,6,8.52,0.96359,1]
["GO:0070589","cellular component macromolecule biosynthetic process",78,8,9.26,1,1,null,"GO:0032956","regulation of actin cytoskeleton organization",29,3,5.38,1,1,null,"GO:0003002","regionalization",232,15,39.33,0.99879,1,null,"GO:0018193","peptidyl-amino acid modification",233,53,46.14,0.96485,1]
["GO:0051667","establishment of plastid localization",17,1,2.02,1,1,null,"GO:0072596","establishment of protein localization to chloroplast",56,12,10.39,1,1,null,"GO:0042273","ribosomal large subunit biogenesis",73,3,12.37,0.99898,1,null,"GO:0006302","double-strand break repair",100,12,19.8,0.9657,1]
["GO:0051668","localization within membrane",125,15,14.84,1,1,null,"GO:0072598","protein localization to chloroplast",56,12,10.39,1,1,null,"GO:0034654","nucleobase-containing compound biosynthetic process",2245,444,380.56,0.99901,1,null,"GO:0022607","cellular component assembly",725,124,143.58,0.96667,1]
["GO:0010166","wax metabolic process",34,4,4.04,1,1,null,"GO:0072599","establishment of protein localization to endoplasmic reticulum",36,7,6.68,1,1,null,"GO:0045491","xylan metabolic process",38,1,6.44,0.99915,1,null,"GO:0044550","secondary metabolite biosynthetic process",165,28,32.68,0.96684,1]
["GO:0051650","establishment of vesicle localization",29,1,3.44,1,1,null,"GO:0009081","branched-chain amino acid metabolic process",39,13,7.24,1,1,null,"GO:0007015","actin filament organization",88,8,14.92,0.99915,1,null,"GO:0006515","protein quality control for misfolded or incompletely synthesized proteins",32,9,6.34,0.97059,1]
["GO:0051651","maintenance of location in cell",45,5,5.34,1,1,null,"GO:0006586","indolalkylamine metabolic process",37,7,6.87,1,1,null,"GO:0022607","cellular component assembly",822,111,139.34,0.99945,1,null,"GO:0009827","plant-type cell wall modification",29,5,5.74,0.97073,1]
["GO:1902025","nitrate import",18,1,2.14,1,1,null,"GO:0050789","regulation of biological process",5292,870,982.14,1,1,null,"GO:1901566","organonitrogen compound biosynthetic process",1743,211,295.46,0.99955,1,null,"GO:0007007","inner mitochondrial membrane organization",16,1,3.17,0.97079,1]
["GO:0008150","biological_process",17202,2042,2042,1,1,null,"GO:0009082","branched-chain amino acid biosynthetic process",19,6,3.53,1,1,null,"GO:0070592","cell wall polysaccharide biosynthetic process",74,3,12.54,0.9996,1,null,"GO:0071248","cellular response to metal ion",16,1,3.17,0.97079,1]
["GO:0008152","metabolic process",11857,1491,1407.51,1,1,null,"GO:0035459","vesicle cargo loading",12,1,2.23,1,1,null,"GO:0051301","cell division",538,47,91.2,0.99969,1,null,"GO:0046185","aldehyde catabolic process",16,1,3.17,0.97079,1]
["GO:0030091","protein repair",13,1,1.54,1,1,null,"GO:0007062","sister chromatid cohesion",29,1,5.38,1,1,null,"GO:0071900","regulation of protein serine/threonine kinase activity",45,1,7.63,0.99977,1,null,"GO:0007010","cytoskeleton organization",228,41,45.15,0.97087,1]
["GO:0046942","carboxylic acid transport",99,13,11.75,1,1,null,"GO:0140527","reciprocal homologous recombination",43,3,7.98,1,1,null,"GO:0006281","DNA repair",322,21,54.58,0.99979,1,null,"GO:0043085","positive regulation of catalytic activity",64,8,12.67,0.97089,1]
["GO:0044247","cellular polysaccharide catabolic process",20,3,2.37,1,1,null,"GO:0000097","sulfur amino acid biosynthetic process",34,10,6.31,1,1,null,"GO:0009888","tissue development",1609,205,272.75,0.99981,1,null,"GO:0010207","photosystem II assembly",25,2,4.95,0.97128,1]
["GO:0008154","actin polymerization or depolymerization",33,2,3.92,1,1,null,"GO:0032989","cellular component morphogenesis",28,4,5.2,1,1,null,"GO:0002181","cytoplasmic translation",78,5,13.22,0.99984,1,null,"GO:0009813","flavonoid biosynthetic process",66,7,13.07,0.97144,1]
["GO:0044249","cellular biosynthetic process",4867,691,577.75,1,1,null,"GO:0050776","regulation of immune response",92,13,17.07,1,1,null,"GO:0051276","chromosome organization",203,6,34.41,0.99985,1,null,"GO:0051085","chaperone cofactor-dependent protein refolding",41,4,8.12,0.97409,1]
["GO:0008156","negative regulation of DNA replication",10,4,1.19,1,1,null,"GO:0050778","positive regulation of immune response",50,10,9.28,1,1,null,"GO:0048532","anatomical structure arrangement",135,21,22.88,0.99987,1,null,"GO:0030150","protein import into mitochondrial matrix",26,2,5.15,0.97618,1]
["GO:0140694","non-membrane-bounded organelle assembly",130,23,15.43,1,1,null,"GO:0006576","biogenic amine metabolic process",58,10,10.76,1,1,null,"GO:0006400","tRNA modification",70,2,11.87,0.99994,1,null,"GO:0006417","regulation of translation",114,23,22.58,0.97648,1]
["GO:0044237","cellular metabolic process",10163,1285,1206.42,1,1,null,"GO:0050779","RNA destabilization",50,5,9.28,1,1,null,"GO:0090698","post-embryonic plant morphogenesis",171,16,28.99,0.99995,1,null,"GO:0046785","microtubule polymerization",17,1,3.37,0.97658,1]
["GO:0044238","primary metabolic process",9718,1261,1153.6,1,1,null,"GO:1902099","regulation of metaphase/anaphase transition of cell cycle",13,1,2.41,1,1,null,"GO:0000910","cytokinesis",190,15,32.21,0.99995,1,null,"GO:0045910","negative regulation of DNA recombination",17,1,3.37,0.97658,1]
["GO:0031570","DNA integrity checkpoint signaling",25,6,2.97,1,1,null,"GO:0007051","spindle organization",43,5,7.98,1,1,null,"GO:0042274","ribosomal small subunit biogenesis",81,2,13.73,0.99996,1,null,"GO:0098781","ncRNA transcription",17,1,3.37,0.97658,1]
["GO:0046939","nucleotide phosphorylation",47,3,5.58,1,1,null,"GO:0032970","regulation of actin filament-based process",30,3,5.57,1,1,null,"GO:0045489","pectin biosynthetic process",59,1,10,0.99998,1,null,"GO:0016556","mRNA modification",48,4,9.51,0.97668,1]
["GO:1905156","negative regulation of photosynthesis",14,1,1.66,1,1,null,"GO:0010404","cell wall hydroxyproline-rich glycoprotein metabolic process",11,2,2.04,1,1,null,"GO:0006364","rRNA processing",237,12,40.18,0.99999,1,null,"GO:0042026","protein refolding",35,3,6.93,0.97981,1]
["GO:0031577","spindle checkpoint signaling",10,1,1.19,1,1,null,"GO:0070592","cell wall polysaccharide biosynthetic process",54,8,10.02,1,1,null,"GO:0000724","double-strand break repair via homologous recombination",90,3,15.26,0.99999,1,null,"GO:0042545","cell wall modification",78,9,15.45,0.98039,1]
["GO:0009700","indole phytoalexin biosynthetic process",17,7,2.02,1,1,null,"GO:1901568","fatty acid derivative metabolic process",30,2,5.57,1,1,null,"GO:0007005","mitochondrion organization",173,9,29.33,0.99999,1,null,"GO:0051259","protein complex oligomerization",45,8,8.91,0.98117,1]
["GO:0140352","export from cell",130,9,15.43,1,1,null,"GO:0007059","chromosome segregation",120,8,22.27,1,1,null,"GO:0009793","embryo development ending in seed dormancy",654,74,110.86,1,1,null,"GO:0007129","homologous chromosome pairing at meiosis",18,1,3.56,0.98122,1]
["GO:0050896","response to stimulus",7641,802,907.04,1,1,null,"GO:0009756","carbohydrate mediated signaling",36,6,6.68,1,1,null,"GO:0006486","protein glycosylation",128,5,21.7,1,1,null,"GO:0007389","pattern specification process",205,48,40.6,0.98331,1]
["GO:0006694","steroid biosynthetic process",36,6,4.27,1,1,null,"GO:0044264","cellular polysaccharide metabolic process",206,31,38.23,1,1,null,"GO:1903046","meiotic cell cycle process",267,20,45.26,1,1,null,"GO:0016070","RNA metabolic process",3871,847,766.6,0.98369,1]
["GO:0051336","regulation of hydrolase activity",67,5,7.95,1,1,null,"GO:0140546","defense response to symbiont",49,12,9.09,1,1,null,"GO:0009059","macromolecule biosynthetic process",3808,588,645.51,1,1,null,"GO:0044271","cellular nitrogen compound biosynthetic process",2920,696,578.27,0.98378,1]
["GO:0051338","regulation of transferase activity",67,6,7.95,1,1,null,"GO:1902903","regulation of supramolecular fiber organization",27,4,5.01,1,1,null,"GO:0043412","macromolecule modification",2607,374,441.93,1,1,null,"GO:1901136","carbohydrate derivative catabolic process",39,6,7.72,0.98492,1]
["GO:0006368","transcription elongation by RNA polymerase II",32,2,3.8,1,1,null,"GO:0062197","cellular response to chemical stress",102,27,18.93,1,1,null,"GO:0009451","RNA modification",354,7,60.01,1,1,null,"GO:0006551","leucine metabolic process",19,1,3.76,0.98494,1]
["GO:0000741","karyogamy",26,10,3.09,1,1,null,"GO:0061013","regulation of mRNA catabolic process",62,8,11.51,1,1,null,"GO:0006412","translation",575,40,97.47,1,1,null,"GO:0000079","regulation of cyclin-dependent protein serine/threonine kinase activity",19,1,3.76,0.98494,1]
["GO:0035196","miRNA processing",29,1,3.44,1,1,null,"GO:0061014","positive regulation of mRNA catabolic process",53,5,9.84,1,1,null,"GO:0009201","ribonucleoside triphosphate biosynthetic process",48,11,8.14,1,1,null,"GO:0016126","sterol biosynthetic process",19,1,3.76,0.98494,1]
["GO:2000242","negative regulation of reproductive process",69,3,8.19,1,1,null,"GO:0002764","immune response-regulating signaling pathway",29,5,5.38,1,1,null,"GO:0071692","protein localization to extracellular region",21,1,3.56,1,1,null,"GO:0007049","cell cycle",569,119,112.68,0.98576,1]
["GO:0018377","protein myristoylation",41,2,4.87,1,1,null,"GO:0090421","embryonic meristem initiation",16,4,2.97,1,1,null,"GO:0006595","polyamine metabolic process",23,7,3.9,1,1,null,"GO:0009063","amino acid catabolic process",71,11,14.06,0.98612,1]
["GO:0042445","hormone metabolic process",96,20,11.4,1,1,null,"GO:0097435","supramolecular fiber organization",133,14,24.68,1,1,null,"GO:0009205","purine ribonucleoside triphosphate metabolic process",90,25,15.26,1,1,null,"GO:0030003","intracellular monoatomic cation homeostasis",121,25,23.96,0.98637,1]
["GO:1902749","regulation of cell cycle G2/M phase transition",30,5,3.56,1,1,null,"GO:0030243","cellulose metabolic process",57,7,10.58,1,1,null,"GO:0009206","purine ribonucleoside triphosphate biosynthetic process",37,9,6.27,1,1,null,"GO:0006400","tRNA modification",71,14,14.06,0.9864,1]
["GO:0046907","intracellular transport",664,61,78.82,1,1,null,"GO:0006547","histidine metabolic process",11,3,2.04,1,1,null,"GO:0009208","pyrimidine ribonucleoside triphosphate metabolic process",17,2,2.88,1,1,null,"GO:0009718","anthocyanin-containing compound biosynthetic process",20,1,3.96,0.98793,1]
["GO:0051648","vesicle localization",29,1,3.44,1,1,null,"GO:0010191","mucilage metabolic process",33,4,6.12,1,1,null,"GO:0009209","pyrimidine ribonucleoside triphosphate biosynthetic process",17,2,2.88,1,1,null,"GO:0016554","cytidine to uridine editing",20,1,3.96,0.98793,1]
["GO:0080050","regulation of seed development",24,3,2.85,1,1,null,"GO:0032940","secretion by cell",58,5,10.76,1,1,null,"GO:0051452","intracellular pH reduction",10,7,1.7,1,1,null,"GO:0009962","regulation of flavonoid biosynthetic process",20,1,3.96,0.98793,1]
["GO:0046794","transport of virus",12,2,1.42,1,1,null,"GO:0006549","isoleucine metabolic process",11,2,2.04,1,1,null,"GO:0042727","flavin-containing compound biosynthetic process",12,1,2.03,1,1,null,"GO:0000963","mitochondrial RNA processing",32,2,6.34,0.98796,1]
["GO:0000002","mitochondrial genome maintenance",13,4,1.54,1,1,null,"GO:1901576","organic substance biosynthetic process",4575,751,849.07,1,1,null,"GO:0050789","regulation of biological process",6244,1221,1058.45,1,1,null,"GO:0051301","cell division",404,73,80.01,0.98906,1]
["GO:0009890","negative regulation of biosynthetic process",321,27,38.1,1,1,null,"GO:0002757","immune response-activating signaling pathway",29,5,5.38,1,1,null,"GO:0016577","histone demethylation",14,1,2.37,1,1,null,"GO:0042440","pigment metabolic process",291,50,57.63,0.99004,1]
["GO:0000003","reproduction",2478,308,294.16,1,1,null,"GO:0023051","regulation of signaling",349,58,64.77,1,1,null,"GO:1902850","microtubule cytoskeleton organization involved in mitosis",35,5,5.93,1,1,null,"GO:0006306","DNA methylation",37,6,7.33,0.99029,1]
["GO:0009893","positive regulation of metabolic process",857,76,101.73,1,1,null,"GO:0002758","innate immune response-activating signaling pathway",29,5,5.38,1,1,null,"GO:1902099","regulation of metaphase/anaphase transition of cell cycle",17,1,2.88,1,1,null,"GO:0042362","fat-soluble vitamin biosynthetic process",21,1,4.16,0.99032,1]
["GO:0009894","regulation of catabolic process",152,9,18.04,1,1,null,"GO:0023056","positive regulation of signaling",68,9,12.62,1,1,null,"GO:0000154","rRNA modification",37,2,6.27,1,1,null,"GO:0051603","proteolysis involved in protein catabolic process",447,112,88.52,0.9919,1]
["GO:0009895","negative regulation of catabolic process",21,1,2.49,1,1,null,"GO:0023057","negative regulation of signaling",88,17,16.33,1,1,null,"GO:0045184","establishment of protein localization",523,82,88.66,1,1,null,"GO:0051054","positive regulation of DNA metabolic process",22,1,4.36,0.99224,1]
["GO:0009896","positive regulation of catabolic process",95,5,11.28,1,1,null,"GO:0046217","indole phytoalexin metabolic process",12,4,2.23,1,1,null,"GO:0045185","maintenance of protein location",24,6,4.07,1,1,null,"GO:0045490","pectin catabolic process",33,2,6.54,0.99375,1]
["GO:0032784","regulation of DNA-templated transcription elongation",31,2,3.68,1,1,null,"GO:0046219","indolalkylamine biosynthetic process",19,3,3.53,1,1,null,"GO:0048236","plant-type sporogenesis",32,7,5.42,1,1,null,"GO:0016482","cytosolic transport",33,2,6.54,0.99375,1]
["GO:0071173","spindle assembly checkpoint signaling",10,1,1.19,1,1,null,"GO:0032200","telomere organization",25,1,4.64,1,1,null,"GO:0050778","positive regulation of immune response",57,11,9.66,1,1,null,"GO:0016485","protein processing",52,5,10.3,0.99376,1]
["GO:0032786","positive regulation of DNA-templated transcription, elongation",25,2,2.97,1,1,null,"GO:0009719","response to endogenous stimulus",1800,378,334.06,1,1,null,"GO:0019751","polyol metabolic process",52,19,8.81,1,1,null,"GO:0007131","reciprocal meiotic recombination",43,3,8.52,0.995,1]
["GO:0071174","mitotic spindle checkpoint signaling",10,1,1.19,1,1,null,"GO:0018393","internal peptidyl-lysine acetylation",35,3,6.5,1,1,null,"GO:0050779","RNA destabilization",50,10,8.48,1,1,null,"GO:0032981","mitochondrial respiratory chain complex I assembly",24,1,4.75,0.99501,1]
["GO:0048583","regulation of response to stimulus",1191,105,141.38,1,1,null,"GO:0018394","peptidyl-lysine acetylation",35,3,6.5,1,1,null,"GO:0019757","glycosinolate metabolic process",211,37,35.77,1,1,null,"GO:0010193","response to ozone",24,1,4.75,0.99501,1]
["GO:0051306","mitotic sister chromatid separation",15,2,1.78,1,1,null,"GO:0072521","purine-containing compound metabolic process",234,33,43.43,1,1,null,"GO:0019758","glycosinolate biosynthetic process",86,11,14.58,1,1,null,"GO:0009314","response to radiation",1703,404,337.26,0.99578,1]
["GO:1901360","organic cyclic compound metabolic process",6073,837,720.91,1,1,null,"GO:0072525","pyridine-containing compound biosynthetic process",21,4,3.9,1,1,null,"GO:0019759","glycosinolate catabolic process",15,5,2.54,1,1,null,"GO:0006626","protein targeting to mitochondrion",51,3,10.1,0.99603,1]
["GO:0006650","glycerophospholipid metabolic process",133,6,15.79,1,1,null,"GO:0000075","cell cycle checkpoint signaling",25,2,4.64,1,1,null,"GO:0070192","chromosome organization involved in meiotic cell cycle",49,2,8.31,1,1,null,"GO:0044282","small molecule catabolic process",183,47,36.24,0.99669,1]
["GO:0070507","regulation of microtubule cytoskeleton organization",28,2,3.32,1,1,null,"GO:0009743","response to carbohydrate",152,22,28.21,1,1,null,"GO:0042743","hydrogen peroxide metabolic process",45,6,7.63,1,1,null,"GO:0051205","protein insertion into membrane",27,1,5.35,0.99743,1]
["GO:0048571","long-day photoperiodism",57,3,6.77,1,1,null,"GO:0072527","pyrimidine-containing compound metabolic process",48,8,8.91,1,1,null,"GO:0045930","negative regulation of mitotic cell cycle",32,2,5.42,1,1,null,"GO:0071669","plant-type cell wall organization or biogenesis",334,61,66.14,0.9977,1]
["GO:0048572","short-day photoperiodism",13,2,1.54,1,1,null,"GO:0070585","protein localization to mitochondrion",54,10,10.02,1,1,null,"GO:0060255","regulation of macromolecule metabolic process",3337,629,565.67,1,1,null,"GO:0046148","pigment biosynthetic process",158,27,31.29,0.99794,1]
["GO:0030029","actin filament-based process",102,8,12.11,1,1,null,"GO:0009746","response to hexose",62,6,11.51,1,1,null,"GO:1903047","mitotic cell cycle process",195,20,33.06,1,1,null,"GO:0006506","GPI anchor biosynthetic process",28,1,5.55,0.99794,1]
["GO:0006310","DNA recombination",170,33,20.18,1,1,null,"GO:0070589","cellular component macromolecule biosynthetic process",58,8,10.76,1,1,null,"GO:0071668","plant-type cell wall assembly",13,1,2.2,1,1,null,"GO:0006261","DNA-templated DNA replication",95,14,18.81,0.99945,1]
["GO:0043572","plastid fission",24,3,2.85,1,1,null,"GO:0051667","establishment of plastid localization",16,3,2.97,1,1,null,"GO:0009798","axis specification",43,5,7.29,1,1,null,"GO:0006486","protein glycosylation",115,10,22.77,0.99955,1]
["GO:0006672","ceramide metabolic process",24,1,2.85,1,1,null,"GO:0010166","wax metabolic process",23,1,4.27,1,1,null,"GO:0033559","unsaturated fatty acid metabolic process",22,8,3.73,1,1,null,"GO:0009451","RNA modification",352,42,69.71,1,1]
["GO:0090150","establishment of protein localization to membrane",101,14,11.99,1,1,null,"GO:0051650","establishment of vesicle localization",29,1,5.38,1,1,null,"GO:0044818","mitotic G2/M transition checkpoint",12,1,2.03,1,1,null,"GO:0006839","mitochondrial transport",58,3,11.49,1,1]
["GO:0031503","protein-containing complex localization",15,1,1.78,1,1,null,"GO:0051656","establishment of organelle localization",70,6,12.99,1,1,null,"GO:0006553","lysine metabolic process",18,1,3.05,1,1,null,"GO:0009987","cellular process",11622,2422,2301.6,1,1]
["GO:0010101","post-embryonic root morphogenesis",64,9,7.6,1,1,null,"GO:0006505","GPI anchor metabolic process",29,4,5.38,1,1,null,"GO:0070988","demethylation",42,3,7.12,1,1,null,"GO:0061983","meiosis II cell cycle process",13,6,2.57,1,1]
["GO:0048511","rhythmic process",160,14,18.99,1,1,null,"GO:0051321","meiotic cell cycle",211,16,39.16,1,1,null,"GO:0070972","protein localization to endoplasmic reticulum",48,2,8.14,1,1,null,"GO:0050918","positive chemotaxis",29,7,5.74,1,1]
["GO:0051493","regulation of cytoskeleton organization",62,7,7.36,1,1,null,"GO:0008150","biological_process",14780,2743,2743,1,1,null,"GO:0034504","protein localization to nucleus",51,5,8.65,1,1,null,"GO:0032101","regulation of response to external stimulus",167,37,33.07,1,1]
["GO:0051494","negative regulation of cytoskeleton organization",14,1,1.66,1,1,null,"GO:0030091","protein repair",12,4,2.23,1,1,null,"GO:0006586","indolalkylamine metabolic process",48,7,8.14,1,1,null,"GO:0009218","pyrimidine ribonucleotide metabolic process",25,4,4.95,1,1]
["GO:0009851","auxin biosynthetic process",31,11,3.68,1,1,null,"GO:0046942","carboxylic acid transport",76,13,14.1,1,1,null,"GO:0010101","post-embryonic root morphogenesis",64,13,10.85,1,1,null,"GO:0007276","gamete generation",48,10,9.51,1,1]
["GO:0030041","actin filament polymerization",19,1,2.26,1,1,null,"GO:0044247","cellular polysaccharide catabolic process",17,2,3.16,1,1,null,"GO:0045143","homologous chromosome segregation",31,1,5.25,1,1,null,"GO:0032104","regulation of response to extracellular stimulus",11,3,2.18,1,1]
["GO:0048518","positive regulation of biological process",1260,124,149.57,1,1,null,"GO:0008154","actin polymerization or depolymerization",28,4,5.2,1,1,null,"GO:0045144","meiotic sister chromatid segregation",15,1,2.54,1,1,null,"GO:0090626","plant epidermis morphogenesis",68,15,13.47,1,1]
["GO:0048519","negative regulation of biological process",1368,133,162.39,1,1,null,"GO:0000018","regulation of DNA recombination",26,6,4.83,1,1,null,"GO:0044839","cell cycle G2/M phase transition",32,4,5.42,1,1,null,"GO:0070887","cellular response to chemical stimulus",1581,406,313.1,1,1]
["GO:0031399","regulation of protein modification process",147,14,17.45,1,1,null,"GO:0044237","cellular metabolic process",8769,1478,1627.43,1,1,null,"GO:0070925","organelle assembly",162,17,27.46,1,1,null,"GO:0009247","glycolipid biosynthetic process",45,2,8.91,1,1]
["GO:0046785","microtubule polymerization",19,1,2.26,1,1,null,"GO:0044238","primary metabolic process",8489,1374,1575.46,1,1,null,"GO:0009756","carbohydrate mediated signaling",39,10,6.61,1,1,null,"GO:0097306","cellular response to alcohol",256,71,50.7,1,1]
["GO:0009880","embryonic pattern specification",20,2,2.37,1,1,null,"GO:0046939","nucleotide phosphorylation",39,6,7.24,1,1,null,"GO:0019747","regulation of isoprenoid metabolic process",34,9,5.76,1,1,null,"GO:0010467","gene expression",3838,927,760.07,1,1]
["GO:0048545","response to steroid hormone",66,16,7.83,1,1,null,"GO:0000725","recombinational repair",71,8,13.18,1,1,null,"GO:0031023","microtubule organizing center organization",12,1,2.03,1,1,null,"GO:0051552","flavone metabolic process",11,3,2.18,1,1]
["GO:0006613","cotranslational protein targeting to membrane",20,2,2.37,1,1,null,"GO:0051345","positive regulation of hydrolase activity",35,7,6.5,1,1,null,"GO:0104004","cellular response to environmental stimulus",255,99,43.23,1,1,null,"GO:0000280","nuclear division",136,27,26.93,1,1]
["GO:0030036","actin cytoskeleton organization",93,8,11.04,1,1,null,"GO:0009700","indole phytoalexin biosynthetic process",12,4,2.23,1,1,null,"GO:0044042","glucan metabolic process",189,37,32.04,1,1,null,"GO:0051553","flavone biosynthetic process",11,3,2.18,1,1]
["GO:0043543","protein acylation",117,5,13.89,1,1,null,"GO:0007006","mitochondrial membrane organization",26,2,4.83,1,1,null,"GO:1902025","nitrate import",18,3,3.05,1,1,null,"GO:0051554","flavonol metabolic process",11,3,2.18,1,1]
["GO:2000060","positive regulation of ubiquitin-dependent protein catabolic process",23,3,2.73,1,1,null,"GO:0007007","inner mitochondrial membrane organization",16,1,2.97,1,1,null,"GO:0140718","facultative heterochromatin formation",14,1,2.37,1,1,null,"GO:0071495","cellular response to endogenous stimulus",931,251,184.37,1,1]
["GO:0072655","establishment of protein localization to mitochondrion",54,14,6.41,1,1,null,"GO:0140352","export from cell",110,12,20.41,1,1,null,"GO:0043062","extracellular structure organization",12,1,2.03,1,1,null,"GO:0061919","process utilizing autophagic mechanism",80,19,15.84,1,1]
["GO:0072657","protein localization to membrane",101,14,11.99,1,1,null,"GO:0050896","response to stimulus",6287,1320,1166.8,1,1,null,"GO:0006549","isoleucine metabolic process",11,2,1.86,1,1,null,"GO:0035303","regulation of dephosphorylation",31,8,6.14,1,1]
["GO:0043547","positive regulation of GTPase activity",34,1,4.04,1,1,null,"GO:0006694","steroid biosynthetic process",30,4,5.57,1,1,null,"GO:0022611","dormancy process",53,20,8.98,1,1,null,"GO:0035304","regulation of protein dephosphorylation",27,7,5.35,1,1]
["GO:0043549","regulation of kinase activity",53,5,6.29,1,1,null,"GO:0051338","regulation of transferase activity",38,5,7.05,1,1,null,"GO:0022613","ribonucleoprotein complex biogenesis",396,29,67.13,1,1,null,"GO:0070828","heterochromatin organization",35,9,6.93,1,1]
["GO:2000069","regulation of post-embryonic root development",19,3,2.26,1,1,null,"GO:0000741","karyogamy",24,6,4.45,1,1,null,"GO:0048764","trichoblast maturation",123,18,20.85,1,1,null,"GO:0104004","cellular response to environmental stimulus",215,50,42.58,1,1]
["GO:0098660","inorganic ion transmembrane transport",177,14,21.01,1,1,null,"GO:0035196","miRNA processing",29,1,5.38,1,1,null,"GO:0043085","positive regulation of catalytic activity",71,12,12.04,1,1,null,"GO:0098813","nuclear chromosome segregation",91,16,18.02,1,1]
["GO:0098661","inorganic anion transmembrane transport",34,2,4.04,1,1,null,"GO:0018377","protein myristoylation",38,4,7.05,1,1,null,"GO:0043087","regulation of GTPase activity",38,9,6.44,1,1,null,"GO:0000959","mitochondrial RNA metabolic process",70,6,13.86,1,1]
["GO:0046049","UMP metabolic process",12,4,1.42,1,1,null,"GO:0042445","hormone metabolic process",74,12,13.73,1,1,null,"GO:0009719","response to endogenous stimulus",2245,617,380.56,1,1,null,"GO:1902221","erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process",15,1,2.97,1,1]
["GO:0044784","metaphase/anaphase transition of cell cycle",21,3,2.49,1,1,null,"GO:0051640","organelle localization",122,8,22.64,1,1,null,"GO:0044000","movement in host",10,4,1.7,1,1,null,"GO:0090304","nucleic acid metabolic process",4232,906,838.1,1,1]
["GO:0044786","cell cycle DNA replication",64,19,7.6,1,1,null,"GO:0051644","plastid localization",22,3,4.08,1,1,null,"GO:0044001","migration in host",10,4,1.7,1,1,null,"GO:0009201","ribonucleoside triphosphate biosynthetic process",45,12,8.91,1,1]
["GO:0046031","ADP metabolic process",49,3,5.82,1,1,null,"GO:0051648","vesicle localization",29,1,5.38,1,1,null,"GO:0034655","nucleobase-containing compound catabolic process",158,23,26.78,1,1,null,"GO:0010476","gibberellin mediated signaling pathway",39,8,7.72,1,1]
["GO:0031365","N-terminal protein amino acid modification",56,2,6.65,1,1,null,"GO:0080050","regulation of seed development",21,5,3.9,1,1,null,"GO:0009746","response to hexose",70,18,11.87,1,1,null,"GO:0009205","purine ribonucleoside triphosphate metabolic process",81,27,16.04,1,1]
["GO:0046034","ATP metabolic process",82,7,9.73,1,1,null,"GO:0000002","mitochondrial genome maintenance",13,1,2.41,1,1,null,"GO:0010257","NADH dehydrogenase complex assembly",25,1,4.24,1,1,null,"GO:0009206","purine ribonucleoside triphosphate biosynthetic process",36,9,7.13,1,1]
["GO:2000058","regulation of ubiquitin-dependent protein catabolic process",26,3,3.09,1,1,null,"GO:0009894","regulation of catabolic process",149,23,27.65,1,1,null,"GO:0006505","GPI anchor metabolic process",30,2,5.09,1,1,null,"GO:0009208","pyrimidine ribonucleoside triphosphate metabolic process",15,3,2.97,1,1]
["GO:0046036","CTP metabolic process",17,4,2.02,1,1,null,"GO:0009896","positive regulation of catabolic process",94,12,17.45,1,1,null,"GO:0000291","nuclear-transcribed mRNA catabolic process, exonucleolytic",23,2,3.9,1,1,null,"GO:0009209","pyrimidine ribonucleoside triphosphate biosynthetic process",15,3,2.97,1,1]
["GO:0006638","neutral lipid metabolic process",26,3,3.09,1,1,null,"GO:0006665","sphingolipid metabolic process",47,12,8.72,1,1,null,"GO:0002376","immune system process",247,48,41.87,1,1,null,"GO:0035601","protein deacylation",11,2,2.18,1,1]
["GO:0044770","cell cycle phase transition",102,17,12.11,1,1,null,"GO:0048581","negative regulation of post-embryonic development",103,9,19.12,1,1,null,"GO:0046217","indole phytoalexin metabolic process",17,4,2.88,1,1,null,"GO:0071462","cellular response to water stimulus",22,4,4.36,1,1]
["GO:0006639","acylglycerol metabolic process",26,3,3.09,1,1,null,"GO:0051304","chromosome separation",12,1,2.23,1,1,null,"GO:0046219","indolalkylamine biosynthetic process",20,2,3.39,1,1,null,"GO:1901800","positive regulation of proteasomal protein catabolic process",22,2,4.36,1,1]
["GO:0044774","mitotic DNA integrity checkpoint signaling",15,2,1.78,1,1,null,"GO:0048583","regulation of response to stimulus",1006,168,186.7,1,1,null,"GO:0051983","regulation of chromosome segregation",24,1,4.07,1,1,null,"GO:0010410","hemicellulose metabolic process",40,7,7.92,1,1]
["GO:0006304","DNA modification",72,8,8.55,1,1,null,"GO:0051306","mitotic sister chromatid separation",11,1,2.04,1,1,null,"GO:0051985","negative regulation of chromosome segregation",10,1,1.7,1,1,null,"GO:0071453","cellular response to oxygen levels",168,49,33.27,1,1]
["GO:0030001","metal ion transport",184,14,21.84,1,1,null,"GO:1901360","organic cyclic compound metabolic process",5281,807,980.09,1,1,null,"GO:0022604","regulation of cell morphogenesis",76,11,12.88,1,1,null,"GO:0042330","taxis",29,7,5.74,1,1]
["GO:0006305","DNA alkylation",46,7,5.46,1,1,null,"GO:0006650","glycerophospholipid metabolic process",121,20,22.46,1,1,null,"GO:0051169","nuclear transport",107,15,18.14,1,1,null,"GO:0009902","chloroplast relocation",16,3,3.17,1,1]
["GO:0019220","regulation of phosphate metabolic process",107,10,12.7,1,1,null,"GO:0032774","RNA biosynthetic process",1645,262,305.29,1,1,null,"GO:0043038","amino acid activation",50,2,8.48,1,1,null,"GO:0048856","anatomical structure development",3961,905,784.43,1,1]
["GO:0005991","trehalose metabolic process",16,1,1.9,1,1,null,"GO:0048572","short-day photoperiodism",12,3,2.23,1,1,null,"GO:0072350","tricarboxylic acid metabolic process",14,3,2.37,1,1,null,"GO:0016052","carbohydrate catabolic process",129,37,25.55,1,1]
["GO:0044042","glucan metabolic process",189,22,22.44,1,1,null,"GO:0042401","biogenic amine biosynthetic process",31,5,5.75,1,1,null,"GO:0043039","tRNA aminoacylation",49,2,8.31,1,1,null,"GO:0016054","organic acid catabolic process",137,39,27.13,1,1]
["GO:1901334","lactone metabolic process",25,1,2.97,1,1,null,"GO:0006310","DNA recombination",134,17,24.87,1,1,null,"GO:0010212","response to ionizing radiation",26,3,4.41,1,1,null,"GO:0009798","axis specification",38,12,7.53,1,1]
["GO:0019222","regulation of metabolic process",3962,423,470.32,1,1,null,"GO:0043572","plastid fission",24,10,4.45,1,1,null,"GO:0018393","internal peptidyl-lysine acetylation",39,3,6.61,1,1,null,"GO:0009064","glutamine family amino acid metabolic process",51,12,10.1,1,1]
["GO:1901336","lactone biosynthetic process",19,1,2.26,1,1,null,"GO:0043574","peroxisomal transport",19,5,3.53,1,1,null,"GO:0018394","peptidyl-lysine acetylation",39,3,6.61,1,1,null,"GO:0009069","serine family amino acid metabolic process",45,9,8.91,1,1]
["GO:0005996","monosaccharide metabolic process",111,5,13.18,1,1,null,"GO:0006670","sphingosine metabolic process",10,2,1.86,1,1,null,"GO:0034645","cellular macromolecule biosynthetic process",957,83,162.23,1,1,null,"GO:0002097","tRNA wobble base modification",19,6,3.76,1,1]
["GO:0042168","heme metabolic process",25,5,2.97,1,1,null,"GO:0090150","establishment of protein localization to membrane",98,9,18.19,1,1,null,"GO:1901800","positive regulation of proteasomal protein catabolic process",23,3,3.9,1,1,null,"GO:0032271","regulation of protein polymerization",19,3,3.76,1,1]
["GO:1901616","organic hydroxy compound catabolic process",22,2,2.61,1,1,null,"GO:0090151","establishment of protein localization to mitochondrial membrane",22,2,4.08,1,1,null,"GO:0048731","system development",3399,558,576.18,1,1,null,"GO:0006553","lysine metabolic process",17,2,3.37,1,1]
["GO:0048506","regulation of timing of meristematic phase transition",31,2,3.68,1,1,null,"GO:0031503","protein-containing complex localization",16,2,2.97,1,1,null,"GO:0000280","nuclear division",180,14,30.51,1,1,null,"GO:0032272","negative regulation of protein polymerization",12,3,2.38,1,1]
["GO:0022611","dormancy process",53,7,6.29,1,1,null,"GO:0010101","post-embryonic root morphogenesis",50,8,9.28,1,1,null,"GO:0000281","mitotic cytokinesis",32,6,5.42,1,1,null,"GO:0006555","methionine metabolic process",23,4,4.55,1,1]
["GO:0022613","ribonucleoprotein complex biogenesis",396,109,47.01,1,1,null,"GO:1901661","quinone metabolic process",32,10,5.94,1,1,null,"GO:0010232","vascular transport",20,3,3.39,1,1,null,"GO:0032950","regulation of beta-glucan metabolic process",18,6,3.56,1,1]
["GO:0022616","DNA strand elongation",15,6,1.78,1,1,null,"GO:0048511","rhythmic process",131,20,24.31,1,1,null,"GO:0051174","regulation of phosphorus metabolic process",108,9,18.31,1,1,null,"GO:0032951","regulation of beta-glucan biosynthetic process",18,6,3.56,1,1]
["GO:0044036","cell wall macromolecule metabolic process",157,23,18.64,1,1,null,"GO:0051493","regulation of cytoskeleton organization",46,5,8.54,1,1,null,"GO:0097577","sequestering of iron ion",10,2,1.7,1,1,null,"GO:0030258","lipid modification",76,24,15.05,1,1]
["GO:0019217","regulation of fatty acid metabolic process",22,4,2.61,1,1,null,"GO:0009851","auxin biosynthetic process",21,1,3.9,1,1,null,"GO:0070297","regulation of phosphorelay signal transduction system",25,6,4.24,1,1,null,"GO:1902930","regulation of alcohol biosynthetic process",19,5,3.76,1,1]
["GO:0044038","cell wall macromolecule biosynthetic process",78,8,9.26,1,1,null,"GO:0030041","actin filament polymerization",18,3,3.34,1,1,null,"GO:0070298","negative regulation of phosphorelay signal transduction system",16,4,2.71,1,1,null,"GO:0072594","establishment of protein localization to organelle",252,54,49.91,1,1]
["GO:0042157","lipoprotein metabolic process",103,2,12.23,1,1,null,"GO:0048518","positive regulation of biological process",1107,167,205.45,1,1,null,"GO:0031570","DNA integrity checkpoint signaling",25,1,4.24,1,1,null,"GO:0072596","establishment of protein localization to chloroplast",56,9,11.09,1,1]
["GO:0031669","cellular response to nutrient levels",157,14,18.64,1,1,null,"GO:0031399","regulation of protein modification process",116,15,21.53,1,1,null,"GO:0051179","localization",2324,445,393.95,1,1,null,"GO:0072598","protein localization to chloroplast",56,9,11.09,1,1]
["GO:0042158","lipoprotein biosynthetic process",101,2,11.99,1,1,null,"GO:0001676","long-chain fatty acid metabolic process",41,10,7.61,1,1,null,"GO:0006661","phosphatidylinositol biosynthetic process",50,8,8.48,1,1,null,"GO:0072599","establishment of protein localization to endoplasmic reticulum",36,3,7.13,1,1]
["GO:0009838","abscission",22,3,2.61,1,1,null,"GO:0034504","protein localization to nucleus",50,3,9.28,1,1,null,"GO:0032502","developmental process",5204,834,882.16,1,1,null,"GO:0016074","sno(s)RNA metabolic process",16,6,3.17,1,1]
["GO:0034660","ncRNA metabolic process",483,101,57.34,1,1,null,"GO:0001678","intracellular glucose homeostasis",18,1,3.34,1,1,null,"GO:0009894","regulation of catabolic process",152,33,25.77,1,1,null,"GO:0016075","rRNA catabolic process",18,5,3.56,1,1]
["GO:0044743","protein transmembrane import into intracellular organelle",45,5,5.34,1,1,null,"GO:0072662","protein localization to peroxisome",17,5,3.16,1,1,null,"GO:0009896","positive regulation of catabolic process",95,19,16.1,1,1,null,"GO:0009081","branched-chain amino acid metabolic process",39,5,7.72,1,1]
["GO:0006497","protein lipidation",101,2,11.99,1,1,null,"GO:0072663","establishment of protein localization to peroxisome",17,5,3.16,1,1,null,"GO:0031577","spindle checkpoint signaling",10,1,1.7,1,1,null,"GO:0006586","indolalkylamine metabolic process",37,6,7.33,1,1]
["GO:0006498","N-terminal protein lipidation",39,2,4.63,1,1,null,"GO:0072665","protein localization to vacuole",49,3,9.09,1,1,null,"GO:1903508","positive regulation of nucleic acid-templated transcription",332,85,56.28,1,1,null,"GO:0050789","regulation of biological process",5292,1223,1048.02,1,1]
["GO:0060255","regulation of macromolecule metabolic process",3337,342,396.13,1,1,null,"GO:0048545","response to steroid hormone",52,8,9.65,1,1,null,"GO:0006650","glycerophospholipid metabolic process",133,27,22.55,1,1,null,"GO:0009082","branched-chain amino acid biosynthetic process",19,5,3.76,1,1]
["GO:0008283","cell population proliferation",74,6,8.78,1,1,null,"GO:1901657","glycosyl compound metabolic process",160,37,29.69,1,1,null,"GO:1903509","liposaccharide metabolic process",53,9,8.98,1,1,null,"GO:0016078","tRNA catabolic process",10,3,1.98,1,1]
["GO:0044000","movement in host",10,2,1.19,1,1,null,"GO:0072666","establishment of protein localization to vacuole",49,3,9.09,1,1,null,"GO:0051129","negative regulation of cellular component organization",36,3,6.1,1,1,null,"GO:0009085","lysine biosynthetic process",15,2,2.97,1,1]
["GO:0044001","migration in host",10,2,1.19,1,1,null,"GO:0006613","cotranslational protein targeting to membrane",20,2,3.71,1,1,null,"GO:0061458","reproductive system development",1932,321,327.5,1,1,null,"GO:0140527","reciprocal homologous recombination",43,3,8.52,1,1]
["GO:0042126","nitrate metabolic process",13,2,1.54,1,1,null,"GO:0030036","actin cytoskeleton organization",79,9,14.66,1,1,null,"GO:0046794","transport of virus",12,4,2.03,1,1,null,"GO:0000097","sulfur amino acid biosynthetic process",34,7,6.73,1,1]
["GO:0002831","regulation of response to biotic stimulus",191,21,22.67,1,1,null,"GO:0090174","organelle membrane fusion",43,2,7.98,1,1,null,"GO:0006670","sphingosine metabolic process",10,7,1.7,1,1,null,"GO:0032989","cellular component morphogenesis",28,9,5.55,1,1]
["GO:0070646","protein modification by small protein removal",90,5,10.68,1,1,null,"GO:0043543","protein acylation",106,9,19.67,1,1,null,"GO:0007602","phototransduction",19,5,3.22,1,1,null,"GO:0050776","regulation of immune response",92,18,18.22,1,1]
["GO:0070647","protein modification by small protein conjugation or removal",104,6,12.35,1,1,null,"GO:2000060","positive regulation of ubiquitin-dependent protein catabolic process",22,4,4.08,1,1,null,"GO:0042044","fluid transport",33,15,5.59,1,1,null,"GO:0009070","serine family amino acid biosynthetic process",32,5,6.34,1,1]
["GO:0002833","positive regulation of response to biotic stimulus",89,8,10.56,1,1,null,"GO:0072655","establishment of protein localization to mitochondrion",54,10,10.02,1,1,null,"GO:0009095","aromatic amino acid family biosynthetic process, prephenate pathway",13,3,2.2,1,1,null,"GO:0050778","positive regulation of immune response",50,13,9.9,1,1]
["GO:0005982","starch metabolic process",68,10,8.07,1,1,null,"GO:0046040","IMP metabolic process",15,1,2.78,1,1,null,"GO:0071367","cellular response to brassinosteroid stimulus",67,6,11.36,1,1,null,"GO:0050779","RNA destabilization",50,12,9.9,1,1]
["GO:0031349","positive regulation of defense response",98,8,11.63,1,1,null,"GO:0072657","protein localization to membrane",98,9,18.19,1,1,null,"GO:0018377","protein myristoylation",41,6,6.95,1,1,null,"GO:1902099","regulation of metaphase/anaphase transition of cell cycle",13,1,2.57,1,1]
["GO:0005984","disaccharide metabolic process",57,5,6.77,1,1,null,"GO:0006641","triglyceride metabolic process",19,2,3.53,1,1,null,"GO:0071368","cellular response to cytokinin stimulus",65,10,11.02,1,1,null,"GO:0009073","aromatic amino acid family biosynthetic process",42,3,8.32,1,1]
["GO:0019932","second-messenger-mediated signaling",39,4,4.63,1,1,null,"GO:0043549","regulation of kinase activity",28,2,5.2,1,1,null,"GO:0006626","protein targeting to mitochondrion",51,2,8.65,1,1,null,"GO:0007051","spindle organization",43,9,8.52,1,1]
["GO:0031330","negative regulation of cellular catabolic process",19,1,2.26,1,1,null,"GO:0046049","UMP metabolic process",11,1,2.04,1,1,null,"GO:0009856","pollination",209,42,35.43,1,1,null,"GO:0032970","regulation of actin filament-based process",30,7,5.94,1,1]
["GO:0031331","positive regulation of cellular catabolic process",88,5,10.45,1,1,null,"GO:0044784","metaphase/anaphase transition of cell cycle",17,2,3.16,1,1,null,"GO:0031537","regulation of anthocyanin metabolic process",27,2,4.58,1,1,null,"GO:1901564","organonitrogen compound metabolic process",4414,951,874.14,1,1]
["GO:1901607","alpha-amino acid biosynthetic process",158,34,18.76,1,1,null,"GO:0044786","cell cycle DNA replication",44,8,8.17,1,1,null,"GO:1902532","negative regulation of intracellular signal transduction",20,4,3.39,1,1,null,"GO:0070592","cell wall polysaccharide biosynthetic process",54,10,10.69,1,1]
["GO:0031333","negative regulation of protein-containing complex assembly",12,1,1.42,1,1,null,"GO:0046031","ADP metabolic process",40,6,7.42,1,1,null,"GO:0140053","mitochondrial gene expression",65,1,11.02,1,1,null,"GO:0007059","chromosome segregation",120,18,23.76,1,1]
["GO:0022603","regulation of anatomical structure morphogenesis",134,14,15.91,1,1,null,"GO:0031365","N-terminal protein amino acid modification",50,5,9.28,1,1,null,"GO:0006613","cotranslational protein targeting to membrane",20,1,3.39,1,1,null,"GO:0009756","carbohydrate mediated signaling",36,8,7.13,1,1]
["GO:0022604","regulation of cell morphogenesis",76,9,9.02,1,1,null,"GO:0046034","ATP metabolic process",73,8,13.55,1,1,null,"GO:0098660","inorganic ion transmembrane transport",177,42,30,1,1,null,"GO:0044260","cellular macromolecule metabolic process",1996,428,395.28,1,1]
["GO:0044706","multi-multicellular organism process",209,20,24.81,1,1,null,"GO:2000058","regulation of ubiquitin-dependent protein catabolic process",25,4,4.64,1,1,null,"GO:0050801","monoatomic ion homeostasis",197,49,33.39,1,1,null,"GO:0044264","cellular polysaccharide metabolic process",206,47,40.8,1,1]
["GO:0008213","protein alkylation",83,11,9.85,1,1,null,"GO:0046036","CTP metabolic process",15,1,2.78,1,1,null,"GO:0043572","plastid fission",24,2,4.07,1,1,null,"GO:0140546","defense response to symbiont",49,11,9.7,1,1]
["GO:1905957","regulation of cellular response to alcohol",119,10,14.13,1,1,null,"GO:0090114","COPII-coated vesicle budding",21,1,3.9,1,1,null,"GO:0071383","cellular response to steroid hormone stimulus",64,6,10.85,1,1,null,"GO:0006518","peptide metabolic process",597,135,118.23,1,1]
["GO:0010972","negative regulation of G2/M transition of mitotic cell cycle",12,2,1.42,1,1,null,"GO:0006638","neutral lipid metabolic process",22,2,4.08,1,1,null,"GO:0043574","peroxisomal transport",19,7,3.22,1,1,null,"GO:0061013","regulation of mRNA catabolic process",62,14,12.28,1,1]
["GO:0008214","protein dealkylation",15,2,1.78,1,1,null,"GO:0006639","acylglycerol metabolic process",22,2,4.08,1,1,null,"GO:0006643","membrane lipid metabolic process",104,23,17.63,1,1,null,"GO:0061014","positive regulation of mRNA catabolic process",53,12,10.5,1,1]
["GO:1905958","negative regulation of cellular response to alcohol",52,3,6.17,1,1,null,"GO:0006304","DNA modification",62,10,11.51,1,1,null,"GO:0009064","glutamine family amino acid metabolic process",58,15,9.83,1,1,null,"GO:0001510","RNA methylation",62,17,12.28,1,1]
["GO:0031647","regulation of protein stability",36,2,4.27,1,1,null,"GO:0030001","metal ion transport",150,28,27.84,1,1,null,"GO:0009069","serine family amino acid metabolic process",53,16,8.98,1,1,null,"GO:0002764","immune response-regulating signaling pathway",29,8,5.74,1,1]
["GO:0006482","protein demethylation",15,2,1.78,1,1,null,"GO:0006305","DNA alkylation",37,6,6.87,1,1,null,"GO:0031503","protein-containing complex localization",15,1,2.54,1,1,null,"GO:1901570","fatty acid derivative biosynthetic process",28,5,5.55,1,1]
["GO:0010921","regulation of phosphatase activity",24,3,2.85,1,1,null,"GO:0019220","regulation of phosphate metabolic process",82,9,15.22,1,1,null,"GO:0006638","neutral lipid metabolic process",26,4,4.41,1,1,null,"GO:0030243","cellulose metabolic process",57,13,11.29,1,1]
["GO:0043666","regulation of phosphoprotein phosphatase activity",22,3,2.61,1,1,null,"GO:0044042","glucan metabolic process",162,21,30.07,1,1,null,"GO:0006639","acylglycerol metabolic process",26,4,4.41,1,1,null,"GO:0006547","histidine metabolic process",11,2,2.18,1,1]
["GO:0055080","monoatomic cation homeostasis",183,9,21.72,1,1,null,"GO:0019222","regulation of metabolic process",3386,540,628.4,1,1,null,"GO:0071322","cellular response to carbohydrate stimulus",56,15,9.49,1,1,null,"GO:0010191","mucilage metabolic process",33,4,6.54,1,1]
["GO:0034641","cellular nitrogen compound metabolic process",6078,910,721.5,1,1,null,"GO:1901334","lactone metabolic process",21,6,3.9,1,1,null,"GO:0071326","cellular response to monosaccharide stimulus",20,6,3.39,1,1,null,"GO:0032940","secretion by cell",58,16,11.49,1,1]
["GO:0055086","nucleobase-containing small molecule metabolic process",372,46,44.16,1,1,null,"GO:0005996","monosaccharide metabolic process",100,14,18.56,1,1,null,"GO:0140029","exocytic process",13,2,2.2,1,1,null,"GO:0006549","isoleucine metabolic process",11,5,2.18,1,1]
["GO:0032885","regulation of polysaccharide biosynthetic process",29,4,3.44,1,1,null,"GO:0048506","regulation of timing of meristematic phase transition",27,8,5.01,1,1,null,"GO:0009081","branched-chain amino acid metabolic process",43,6,7.29,1,1,null,"GO:0002757","immune response-activating signaling pathway",29,8,5.74,1,1]
["GO:0032886","regulation of microtubule-based process",28,2,3.32,1,1,null,"GO:0022611","dormancy process",52,11,9.65,1,1,null,"GO:0009082","branched-chain amino acid biosynthetic process",20,2,3.39,1,1,null,"GO:0061726","mitochondrion disassembly",18,3,3.56,1,1]
["GO:0010232","vascular transport",20,3,2.37,1,1,null,"GO:0048508","embryonic meristem development",23,4,4.27,1,1,null,"GO:0043543","protein acylation",117,12,19.83,1,1,null,"GO:0023056","positive regulation of signaling",68,20,13.47,1,1]
["GO:0034645","cellular macromolecule biosynthetic process",957,200,113.6,1,1,null,"GO:0022613","ribonucleoprotein complex biogenesis",394,32,73.12,1,1,null,"GO:0048856","anatomical structure development",4822,770,817.4,1,1,null,"GO:0023057","negative regulation of signaling",88,25,17.43,1,1]
["GO:0006473","protein acetylation",53,3,6.29,1,1,null,"GO:0022616","DNA strand elongation",11,2,2.04,1,1,null,"GO:0043549","regulation of kinase activity",53,2,8.98,1,1,null,"GO:0046217","indole phytoalexin metabolic process",12,6,2.38,1,1]
["GO:0006475","internal protein amino acid acetylation",39,3,4.63,1,1,null,"GO:1902850","microtubule cytoskeleton organization involved in mitosis",23,2,4.27,1,1,null,"GO:0140013","meiotic nuclear division",110,9,18.65,1,1,null,"GO:0046219","indolalkylamine biosynthetic process",19,3,3.76,1,1]
["GO:0055071","manganese ion homeostasis",17,3,2.02,1,1,null,"GO:0044036","cell wall macromolecule metabolic process",113,23,20.97,1,1,null,"GO:0009073","aromatic amino acid family biosynthetic process",45,5,7.63,1,1,null,"GO:0000086","G2/M transition of mitotic cell cycle",16,5,3.17,1,1]
["GO:0035265","organ growth",24,2,2.85,1,1,null,"GO:0019216","regulation of lipid metabolic process",65,12,12.06,1,1,null,"GO:0080120","CAAX-box protein maturation",10,2,1.7,1,1,null,"GO:0009719","response to endogenous stimulus",1800,452,356.47,1,1]
["GO:0055072","iron ion homeostasis",41,4,4.87,1,1,null,"GO:0044038","cell wall macromolecule biosynthetic process",58,8,10.76,1,1,null,"GO:0009838","abscission",22,7,3.73,1,1,null,"GO:0018393","internal peptidyl-lysine acetylation",35,8,6.93,1,1]
["GO:0032879","regulation of localization",121,13,14.36,1,1,null,"GO:0042157","lipoprotein metabolic process",96,9,17.82,1,1,null,"GO:0071331","cellular response to hexose stimulus",20,6,3.39,1,1,null,"GO:0035437","maintenance of protein localization in endoplasmic reticulum",11,3,2.18,1,1]
["GO:0034637","cellular carbohydrate biosynthetic process",205,18,24.33,1,1,null,"GO:0031669","cellular response to nutrient levels",130,32,24.13,1,1,null,"GO:0048871","multicellular organismal-level homeostasis",32,3,5.42,1,1,null,"GO:0018394","peptidyl-lysine acetylation",35,8,6.93,1,1]
["GO:0016567","protein ubiquitination",15,1,1.78,1,1,null,"GO:0042158","lipoprotein biosynthetic process",95,9,17.63,1,1,null,"GO:0042558","pteridine-containing compound metabolic process",36,7,6.1,1,1,null,"GO:0072521","purine-containing compound metabolic process",234,62,46.34,1,1]
["GO:0010941","regulation of cell death",100,10,11.87,1,1,null,"GO:0034660","ncRNA metabolic process",474,31,87.97,1,1,null,"GO:0042559","pteridine-containing compound biosynthetic process",17,2,2.88,1,1,null,"GO:0072524","pyridine-containing compound metabolic process",61,19,12.08,1,1]
["GO:0010942","positive regulation of cell death",31,1,3.68,1,1,null,"GO:0034661","ncRNA catabolic process",22,1,4.08,1,1,null,"GO:0080112","seed growth",14,4,2.37,1,1,null,"GO:0000075","cell cycle checkpoint signaling",25,4,4.95,1,1]
["GO:0016556","mRNA modification",49,8,5.82,1,1,null,"GO:0042181","ketone biosynthetic process",33,10,6.12,1,1,null,"GO:0048826","cotyledon morphogenesis",18,1,3.05,1,1,null,"GO:0070585","protein localization to mitochondrion",54,3,10.69,1,1]
["GO:0009566","fertilization",25,1,2.97,1,1,null,"GO:1900864","mitochondrial RNA modification",35,7,6.5,1,1,null,"GO:0030198","extracellular matrix organization",12,1,2.03,1,1,null,"GO:0009746","response to hexose",62,16,12.28,1,1]
["GO:0035966","response to topologically incorrect protein",57,7,6.77,1,1,null,"GO:0010257","NADH dehydrogenase complex assembly",24,7,4.45,1,1,null,"GO:0051253","negative regulation of RNA metabolic process",188,53,31.87,1,1,null,"GO:0070589","cellular component macromolecule biosynthetic process",58,10,11.49,1,1]
["GO:0035967","cellular response to topologically incorrect protein",54,7,6.41,1,1,null,"GO:0006497","protein lipidation",95,9,17.63,1,1,null,"GO:0051258","protein polymerization",38,4,6.44,1,1,null,"GO:0051667","establishment of plastid localization",16,3,3.17,1,1]
["GO:0052541","plant-type cell wall cellulose metabolic process",22,1,2.61,1,1,null,"GO:0006498","N-terminal protein lipidation",36,4,6.68,1,1,null,"GO:1902652","secondary alcohol metabolic process",10,3,1.7,1,1,null,"GO:0051668","localization within membrane",122,17,24.16,1,1]
["GO:0008202","steroid metabolic process",59,8,7,1,1,null,"GO:0060255","regulation of macromolecule metabolic process",2884,448,535.24,1,1,null,"GO:0061982","meiosis I cell cycle process",72,4,12.21,1,1,null,"GO:0010166","wax metabolic process",23,5,4.55,1,1]
["GO:0010208","pollen wall assembly",25,2,2.97,1,1,null,"GO:0008283","cell population proliferation",60,3,11.14,1,1,null,"GO:0061983","meiosis II cell cycle process",21,1,3.56,1,1,null,"GO:0051650","establishment of vesicle localization",29,4,5.74,1,1]
["GO:0052545","callose localization",39,10,4.63,1,1,null,"GO:0010962","regulation of glucan biosynthetic process",26,1,4.83,1,1,null,"GO:0045786","negative regulation of cell cycle",61,3,10.34,1,1,null,"GO:0008150","biological_process",14780,2927,2927,1,1]
["GO:0043628","regulatory ncRNA 3'-end processing",21,4,2.49,1,1,null,"GO:0042126","nitrate metabolic process",11,3,2.04,1,1,null,"GO:1902680","positive regulation of RNA biosynthetic process",332,85,56.28,1,1,null,"GO:0008152","metabolic process",10217,2130,2023.35,1,1]
["GO:0016570","histone modification",141,11,16.74,1,1,null,"GO:0034311","diol metabolic process",13,3,2.41,1,1,null,"GO:0030162","regulation of proteolysis",39,8,6.61,1,1,null,"GO:0030091","protein repair",12,1,2.38,1,1]
["GO:0046885","regulation of hormone biosynthetic process",18,6,2.14,1,1,null,"GO:0002831","regulation of response to biotic stimulus",156,28,28.95,1,1,null,"GO:0051273","beta-glucan metabolic process",75,13,12.71,1,1,null,"GO:0008154","actin polymerization or depolymerization",28,5,5.55,1,1]
["GO:0009583","detection of light stimulus",21,3,2.49,1,1,null,"GO:0070647","protein modification by small protein conjugation or removal",98,9,18.19,1,1,null,"GO:0051274","beta-glucan biosynthetic process",69,13,11.7,1,1,null,"GO:0000018","regulation of DNA recombination",26,1,5.15,1,1]
["GO:1901420","negative regulation of response to alcohol",52,3,6.17,1,1,null,"GO:0005984","disaccharide metabolic process",49,13,9.09,1,1,null,"GO:0034311","diol metabolic process",13,7,2.2,1,1,null,"GO:0006399","tRNA metabolic process",158,34,31.29,1,1]
["GO:0019750","chloroplast localization",22,1,2.61,1,1,null,"GO:0000819","sister chromatid segregation",62,4,11.51,1,1,null,"GO:0034312","diol biosynthetic process",13,7,2.2,1,1,null,"GO:0140694","non-membrane-bounded organelle assembly",115,16,22.77,1,1]
["GO:0019751","polyol metabolic process",52,2,6.17,1,1,null,"GO:1901607","alpha-amino acid biosynthetic process",144,33,26.72,1,1,null,"GO:0071495","cellular response to endogenous stimulus",1115,288,189.01,1,1,null,"GO:0031570","DNA integrity checkpoint signaling",14,3,2.77,1,1]
["GO:0019757","glycosinolate metabolic process",211,48,25.05,1,1,null,"GO:0031333","negative regulation of protein-containing complex assembly",12,3,2.23,1,1,null,"GO:1902679","negative regulation of RNA biosynthetic process",174,51,29.5,1,1,null,"GO:0046939","nucleotide phosphorylation",39,15,7.72,1,1]
["GO:0019758","glycosinolate biosynthetic process",86,25,10.21,1,1,null,"GO:0022604","regulation of cell morphogenesis",72,13,13.36,1,1,null,"GO:0006399","tRNA metabolic process",158,4,26.78,1,1,null,"GO:0000725","recombinational repair",71,9,14.06,1,1]
["GO:0019759","glycosinolate catabolic process",15,3,1.78,1,1,null,"GO:0044706","multi-multicellular organism process",214,42,39.72,1,1,null,"GO:0000725","recombinational repair",96,3,16.27,1,1,null,"GO:0009700","indole phytoalexin biosynthetic process",12,6,2.38,1,1]
["GO:0043647","inositol phosphate metabolic process",20,1,2.37,1,1,null,"GO:0008213","protein alkylation",76,4,14.1,1,1,null,"GO:1901699","cellular response to nitrogen compound",47,8,7.97,1,1,null,"GO:0007006","mitochondrial membrane organization",26,1,5.15,1,1]
["GO:0061572","actin filament bundle organization",17,1,2.02,1,1,null,"GO:1905957","regulation of cellular response to alcohol",102,19,18.93,1,1,null,"GO:0061919","process utilizing autophagic mechanism",82,27,13.9,1,1,null,"GO:0006694","steroid biosynthetic process",30,6,5.94,1,1]
["GO:0070482","response to oxygen levels",280,32,33.24,1,1,null,"GO:0008214","protein dealkylation",15,2,2.78,1,1,null,"GO:0033365","protein localization to organelle",274,40,46.45,1,1,null,"GO:0051336","regulation of hydrolase activity",66,13,13.07,1,1]
["GO:0022411","cellular component disassembly",98,5,11.63,1,1,null,"GO:1905958","negative regulation of cellular response to alcohol",44,9,8.17,1,1,null,"GO:0051247","positive regulation of protein metabolic process",84,17,14.24,1,1,null,"GO:0051338","regulation of transferase activity",38,5,7.53,1,1]
["GO:1901419","regulation of response to alcohol",119,10,14.13,1,1,null,"GO:0031647","regulation of protein stability",33,6,6.12,1,1,null,"GO:0009566","fertilization",25,7,4.24,1,1,null,"GO:0000741","karyogamy",24,3,4.75,1,1]
["GO:0022414","reproductive process",2463,308,292.38,1,1,null,"GO:0006482","protein demethylation",15,2,2.78,1,1,null,"GO:0000741","karyogamy",26,2,4.41,1,1,null,"GO:0018377","protein myristoylation",38,7,7.53,1,1]
["GO:0043632","modification-dependent macromolecule catabolic process",420,20,49.86,1,1,null,"GO:0010921","regulation of phosphatase activity",26,5,4.83,1,1,null,"GO:0071462","cellular response to water stimulus",31,14,5.25,1,1,null,"GO:0042445","hormone metabolic process",74,25,14.65,1,1]
["GO:0051168","nuclear export",63,4,7.48,1,1,null,"GO:0043666","regulation of phosphoprotein phosphatase activity",24,5,4.45,1,1,null,"GO:1902644","tertiary alcohol metabolic process",39,16,6.61,1,1,null,"GO:0042446","hormone biosynthetic process",29,9,5.74,1,1]
["GO:0051169","nuclear transport",107,10,12.7,1,1,null,"GO:0055080","monoatomic cation homeostasis",155,38,28.77,1,1,null,"GO:1902645","tertiary alcohol biosynthetic process",24,11,4.07,1,1,null,"GO:0006354","DNA-templated transcription elongation",49,10,9.7,1,1]
["GO:0030832","regulation of actin filament length",17,2,2.02,1,1,null,"GO:0032880","regulation of protein localization",24,2,4.45,1,1,null,"GO:0051235","maintenance of location",64,22,10.85,1,1,null,"GO:1902749","regulation of cell cycle G2/M phase transition",17,5,3.37,1,1]
["GO:0030833","regulation of actin filament polymerization",13,1,1.54,1,1,null,"GO:0010927","cellular component assembly involved in morphogenesis",27,4,5.01,1,1,null,"GO:0051236","establishment of RNA localization",52,8,8.81,1,1,null,"GO:0046903","secretion",62,16,12.28,1,1]
["GO:0006402","mRNA catabolic process",104,4,12.35,1,1,null,"GO:0034641","cellular nitrogen compound metabolic process",5370,776,996.61,1,1,null,"GO:0071450","cellular response to oxygen radical",12,1,2.03,1,1,null,"GO:0051643","endoplasmic reticulum localization",10,1,1.98,1,1]
["GO:0006403","RNA localization",55,6,6.53,1,1,null,"GO:0055086","nucleobase-containing small molecule metabolic process",336,50,62.36,1,1,null,"GO:0009559","embryo sac central cell differentiation",27,2,4.58,1,1,null,"GO:0051644","plastid localization",22,7,4.36,1,1]
["GO:0051156","glucose 6-phosphate metabolic process",35,3,4.15,1,1,null,"GO:0032885","regulation of polysaccharide biosynthetic process",27,1,5.01,1,1,null,"GO:1901661","quinone metabolic process",34,8,5.76,1,1,null,"GO:0051648","vesicle localization",29,4,5.74,1,1]
["GO:0010053","root epidermal cell differentiation",147,16,17.45,1,1,null,"GO:0032886","regulation of microtubule-based process",16,2,2.97,1,1,null,"GO:0071451","cellular response to superoxide",12,1,2.03,1,1,null,"GO:0009896","positive regulation of catabolic process",94,19,18.62,1,1]
["GO:0018195","peptidyl-arginine modification",12,3,1.42,1,1,null,"GO:0030865","cortical cytoskeleton organization",49,5,9.09,1,1,null,"GO:0071453","cellular response to oxygen levels",203,88,34.41,1,1,null,"GO:0006664","glycolipid metabolic process",51,4,10.1,1,1]
["GO:0048608","reproductive structure development",1931,251,229.22,1,1,null,"GO:0034645","cellular macromolecule biosynthetic process",899,100,166.84,1,1,null,"GO:0140527","reciprocal homologous recombination",57,3,9.66,1,1,null,"GO:0051304","chromosome separation",12,2,2.38,1,1]
["GO:0051170","import into nucleus",50,6,5.94,1,1,null,"GO:0006473","protein acetylation",47,4,8.72,1,1,null,"GO:0048598","embryonic morphogenesis",28,1,4.75,1,1,null,"GO:0048583","regulation of response to stimulus",1006,254,199.23,1,1]
["GO:0051172","negative regulation of nitrogen compound metabolic process",343,31,40.72,1,1,null,"GO:0006475","internal protein amino acid acetylation",35,3,6.5,1,1,null,"GO:1901657","glycosyl compound metabolic process",241,38,40.85,1,1,null,"GO:1901360","organic cyclic compound metabolic process",5281,1136,1045.84,1,1]
["GO:0071900","regulation of protein serine/threonine kinase activity",45,5,5.34,1,1,null,"GO:0006476","protein deacetylation",10,3,1.86,1,1,null,"GO:1905818","regulation of chromosome separation",14,1,2.37,1,1,null,"GO:0048572","short-day photoperiodism",12,6,2.38,1,1]
["GO:0051174","regulation of phosphorus metabolic process",108,10,12.82,1,1,null,"GO:0006479","protein methylation",76,4,14.1,1,1,null,"GO:1905819","negative regulation of chromosome separation",10,1,1.7,1,1,null,"GO:0042401","biogenic amine biosynthetic process",31,7,6.14,1,1]
["GO:0046839","phospholipid dephosphorylation",23,1,2.73,1,1,null,"GO:0055071","manganese ion homeostasis",12,3,2.23,1,1,null,"GO:1901659","glycosyl compound biosynthetic process",96,11,16.27,1,1,null,"GO:0036503","ERAD pathway",57,15,11.29,1,1]
["GO:0010769","regulation of cell morphogenesis involved in differentiation",21,2,2.49,1,1,null,"GO:0035265","organ growth",19,2,3.53,1,1,null,"GO:0035592","establishment of protein localization to extracellular region",21,1,3.56,1,1,null,"GO:0043572","plastid fission",24,3,4.75,1,1]
["GO:0044818","mitotic G2/M transition checkpoint",12,2,1.42,1,1,null,"GO:1901463","regulation of tetrapyrrole biosynthetic process",27,4,5.01,1,1,null,"GO:0070726","cell wall assembly",13,1,2.2,1,1,null,"GO:0043574","peroxisomal transport",19,9,3.76,1,1]
["GO:0033238","regulation of amine metabolic process",15,3,1.78,1,1,null,"GO:0055072","iron ion homeostasis",31,12,5.75,1,1,null,"GO:0140546","defense response to symbiont",57,23,9.66,1,1,null,"GO:0006670","sphingosine metabolic process",10,4,1.98,1,1]
["GO:0034470","ncRNA processing",402,84,47.72,1,1,null,"GO:0071985","multivesicular body sorting pathway",33,2,6.12,1,1,null,"GO:0043628","regulatory ncRNA 3'-end processing",21,1,3.56,1,1,null,"GO:0072350","tricarboxylic acid metabolic process",12,6,2.38,1,1]
["GO:0034472","snRNA 3'-end processing",14,1,1.66,1,1,null,"GO:0009566","fertilization",23,5,4.27,1,1,null,"GO:0071478","cellular response to radiation",178,72,30.17,1,1,null,"GO:0051606","detection of stimulus",55,15,10.89,1,1]
["GO:0051129","negative regulation of cellular component organization",36,5,4.27,1,1,null,"GO:0035966","response to topologically incorrect protein",56,14,10.39,1,1,null,"GO:0046885","regulation of hormone biosynthetic process",18,2,3.05,1,1,null,"GO:0031503","protein-containing complex localization",16,5,3.17,1,1]
["GO:0010022","meristem determinacy",11,3,1.31,1,1,null,"GO:0035967","cellular response to topologically incorrect protein",53,13,9.84,1,1,null,"GO:2000058","regulation of ubiquitin-dependent protein catabolic process",26,4,4.41,1,1,null,"GO:0010101","post-embryonic root morphogenesis",50,15,9.9,1,1]
["GO:0022402","cell cycle process",622,101,73.84,1,1,null,"GO:0052541","plant-type cell wall cellulose metabolic process",20,1,3.71,1,1,null,"GO:0006310","DNA recombination",170,9,28.82,1,1,null,"GO:1901661","quinone metabolic process",32,3,6.34,1,1]
["GO:1903050","regulation of proteolysis involved in protein catabolic process",34,3,4.04,1,1,null,"GO:0052545","callose localization",32,4,5.94,1,1,null,"GO:2000816","negative regulation of mitotic sister chromatid separation",10,1,1.7,1,1,null,"GO:0048511","rhythmic process",131,46,25.94,1,1]
["GO:0042278","purine nucleoside metabolic process",13,2,1.54,1,1,null,"GO:0009559","embryo sac central cell differentiation",25,6,4.64,1,1,null,"GO:0043631","RNA polyadenylation",27,4,4.58,1,1,null,"GO:0051493","regulation of cytoskeleton organization",46,11,9.11,1,1]
["GO:1903052","positive regulation of proteolysis involved in protein catabolic process",26,3,3.09,1,1,null,"GO:0046885","regulation of hormone biosynthetic process",13,1,2.41,1,1,null,"GO:0043632","modification-dependent macromolecule catabolic process",420,89,71.2,1,1,null,"GO:0030041","actin filament polymerization",18,3,3.56,1,1]
["GO:0044839","cell cycle G2/M phase transition",32,5,3.8,1,1,null,"GO:0016577","histone demethylation",14,2,2.6,1,1,null,"GO:0043633","polyadenylation-dependent RNA catabolic process",12,1,2.03,1,1,null,"GO:0048518","positive regulation of biological process",1107,287,219.23,1,1]
["GO:0042221","response to chemical",4174,417,495.48,1,1,null,"GO:0009583","detection of light stimulus",20,4,3.71,1,1,null,"GO:0048583","regulation of response to stimulus",1191,287,201.89,1,1,null,"GO:0006625","protein targeting to peroxisome",17,7,3.37,1,1]
["GO:0048466","androecium development",73,7,8.67,1,1,null,"GO:1901420","negative regulation of response to alcohol",44,9,8.17,1,1,null,"GO:0043634","polyadenylation-dependent ncRNA catabolic process",12,1,2.03,1,1,null,"GO:0031399","regulation of protein modification process",116,30,22.97,1,1]
["GO:0048469","cell maturation",123,15,14.6,1,1,null,"GO:0019750","chloroplast localization",21,3,3.9,1,1,null,"GO:0032350","regulation of hormone metabolic process",24,2,4.07,1,1,null,"GO:0072662","protein localization to peroxisome",17,7,3.37,1,1]
["GO:0034410","cell wall beta-glucan biosynthetic process",18,1,2.14,1,1,null,"GO:0019757","glycosinolate metabolic process",132,34,24.5,1,1,null,"GO:0048572","short-day photoperiodism",13,3,2.2,1,1,null,"GO:0072663","establishment of protein localization to peroxisome",17,7,3.37,1,1]
["GO:0003013","circulatory system process",20,3,2.37,1,1,null,"GO:0019758","glycosinolate biosynthetic process",50,14,9.28,1,1,null,"GO:0110154","RNA decapping",13,4,2.2,1,1,null,"GO:0072665","protein localization to vacuole",49,11,9.7,1,1]
["GO:0042214","terpene metabolic process",26,1,3.09,1,1,null,"GO:0019759","glycosinolate catabolic process",10,2,1.86,1,1,null,"GO:0019693","ribose phosphate metabolic process",212,41,35.94,1,1,null,"GO:0048545","response to steroid hormone",52,11,10.3,1,1]
["GO:0045488","pectin metabolic process",109,27,12.94,1,1,null,"GO:0061572","actin filament bundle organization",14,3,2.6,1,1,null,"GO:0022414","reproductive process",2463,406,417.52,1,1,null,"GO:1901657","glycosyl compound metabolic process",160,28,31.69,1,1]
["GO:2000816","negative regulation of mitotic sister chromatid separation",10,1,1.19,1,1,null,"GO:0070482","response to oxygen levels",231,56,42.87,1,1,null,"GO:0010876","lipid localization",105,29,17.8,1,1,null,"GO:0072666","establishment of protein localization to vacuole",49,11,9.7,1,1]
["GO:0052386","cell wall thickening",29,9,3.44,1,1,null,"GO:0022411","cellular component disassembly",92,10,17.07,1,1,null,"GO:0036503","ERAD pathway",59,9,10,1,1,null,"GO:0006613","cotranslational protein targeting to membrane",20,3,3.96,1,1]
["GO:0006163","purine nucleotide metabolic process",237,26,28.13,1,1,null,"GO:1901419","regulation of response to alcohol",102,19,18.93,1,1,null,"GO:0048511","rhythmic process",160,59,27.12,1,1,null,"GO:0043543","protein acylation",106,22,20.99,1,1]
["GO:0003018","vascular process in circulatory system",20,3,2.37,1,1,null,"GO:0022412","cellular process involved in reproduction in multicellular organism",40,5,7.42,1,1,null,"GO:0050657","nucleic acid transport",52,8,8.81,1,1,null,"GO:2000060","positive regulation of ubiquitin-dependent protein catabolic process",22,2,4.36,1,1]
["GO:0006165","nucleoside diphosphate phosphorylation",47,3,5.58,1,1,null,"GO:0022414","reproductive process",2202,390,408.67,1,1,null,"GO:1900140","regulation of seedling development",96,28,16.27,1,1,null,"GO:0072655","establishment of protein localization to mitochondrion",54,3,10.69,1,1]
["GO:0010033","response to organic substance",3639,359,431.98,1,1,null,"GO:0043632","modification-dependent macromolecule catabolic process",405,78,75.16,1,1,null,"GO:0050658","RNA transport",52,8,8.81,1,1,null,"GO:0046040","IMP metabolic process",15,4,2.97,1,1]
["GO:0043450","alkene biosynthetic process",23,5,2.73,1,1,null,"GO:0051168","nuclear export",64,8,11.88,1,1,null,"GO:0048518","positive regulation of biological process",1260,283,213.59,1,1,null,"GO:0072657","protein localization to membrane",98,13,19.41,1,1]
["GO:0071025","RNA surveillance",16,1,1.9,1,1,null,"GO:0051169","nuclear transport",108,11,20.04,1,1,null,"GO:0006304","DNA modification",72,5,12.21,1,1,null,"GO:0043547","positive regulation of GTPase activity",31,3,6.14,1,1]
["GO:1902531","regulation of intracellular signal transduction",43,8,5.1,1,1,null,"GO:0030832","regulation of actin filament length",15,3,2.78,1,1,null,"GO:0018195","peptidyl-arginine modification",12,1,2.03,1,1,null,"GO:0006643","membrane lipid metabolic process",102,13,20.2,1,1]
["GO:0043484","regulation of RNA splicing",35,1,4.15,1,1,null,"GO:0008064","regulation of actin polymerization or depolymerization",15,3,2.78,1,1,null,"GO:0006305","DNA alkylation",46,3,7.8,1,1,null,"GO:0098660","inorganic ion transmembrane transport",149,38,29.51,1,1]
["GO:0009692","ethylene metabolic process",23,5,2.73,1,1,null,"GO:0006403","RNA localization",55,7,10.21,1,1,null,"GO:0048545","response to steroid hormone",66,6,11.19,1,1,null,"GO:0046049","UMP metabolic process",11,1,2.18,1,1]
["GO:0009694","jasmonic acid metabolic process",39,7,4.63,1,1,null,"GO:0051156","glucose 6-phosphate metabolic process",32,7,5.94,1,1,null,"GO:1903320","regulation of protein modification by small protein conjugation or removal",11,1,1.86,1,1,null,"GO:0044784","metaphase/anaphase transition of cell cycle",17,2,3.37,1,1]
["GO:0006188","IMP biosynthetic process",14,5,1.66,1,1,null,"GO:0006405","RNA export from nucleus",46,6,8.54,1,1,null,"GO:0035510","DNA dealkylation",27,2,4.58,1,1,null,"GO:0046031","ADP metabolic process",40,15,7.92,1,1]
["GO:0009696","salicylic acid metabolic process",40,3,4.75,1,1,null,"GO:0019725","cellular homeostasis",198,44,36.75,1,1,null,"GO:0018198","peptidyl-cysteine modification",19,2,3.22,1,1,null,"GO:0031365","N-terminal protein amino acid modification",50,9,9.9,1,1]
["GO:0090066","regulation of anatomical structure size",45,5,5.34,1,1,null,"GO:0048608","reproductive structure development",1733,319,321.63,1,1,null,"GO:0031399","regulation of protein modification process",147,17,24.92,1,1,null,"GO:2000058","regulation of ubiquitin-dependent protein catabolic process",25,3,4.95,1,1]
["GO:0052314","phytoalexin metabolic process",17,7,2.02,1,1,null,"GO:0051170","import into nucleus",50,3,9.28,1,1,null,"GO:0000097","sulfur amino acid biosynthetic process",39,10,6.61,1,1,null,"GO:0046036","CTP metabolic process",15,3,2.97,1,1]
["GO:0052315","phytoalexin biosynthetic process",17,7,2.02,1,1,null,"GO:0042255","ribosome assembly",57,4,10.58,1,1,null,"GO:0051783","regulation of nuclear division",30,5,5.09,1,1,null,"GO:0071103","DNA conformation change",27,3,5.35,1,1]
["GO:0052317","camalexin metabolic process",16,7,1.9,1,1,null,"GO:0071900","regulation of protein serine/threonine kinase activity",22,1,4.08,1,1,null,"GO:0051784","negative regulation of nuclear division",16,1,2.71,1,1,null,"GO:0090114","COPII-coated vesicle budding",21,6,4.16,1,1]
["GO:1903047","mitotic cell cycle process",195,22,23.15,1,1,null,"GO:0051174","regulation of phosphorus metabolic process",83,9,15.4,1,1,null,"GO:1901607","alpha-amino acid biosynthetic process",158,33,26.78,1,1,null,"GO:0006638","neutral lipid metabolic process",22,6,4.36,1,1]
["GO:0090056","regulation of chlorophyll metabolic process",34,4,4.04,1,1,null,"GO:0010074","maintenance of meristem identity",45,5,8.35,1,1,null,"GO:0051788","response to misfolded protein",25,9,4.24,1,1,null,"GO:0044770","cell cycle phase transition",64,10,12.67,1,1]
["GO:0050657","nucleic acid transport",52,6,6.17,1,1,null,"GO:0033238","regulation of amine metabolic process",12,2,2.23,1,1,null,"GO:0046040","IMP metabolic process",15,1,2.54,1,1,null,"GO:0006639","acylglycerol metabolic process",22,6,4.36,1,1]
["GO:0070192","chromosome organization involved in meiotic cell cycle",49,3,5.82,1,1,null,"GO:0034470","ncRNA processing",397,23,73.68,1,1,null,"GO:1903311","regulation of mRNA metabolic process",98,17,16.61,1,1,null,"GO:0006304","DNA modification",62,9,12.28,1,1]
["GO:0050684","regulation of mRNA processing",35,1,4.15,1,1,null,"GO:0051129","negative regulation of cellular component organization",30,4,5.57,1,1,null,"GO:0046031","ADP metabolic process",49,13,8.31,1,1,null,"GO:0030001","metal ion transport",150,33,29.71,1,1]
["GO:0034406","cell wall beta-glucan metabolic process",23,1,2.73,1,1,null,"GO:1901401","regulation of tetrapyrrole metabolic process",43,6,7.98,1,1,null,"GO:0019682","glyceraldehyde-3-phosphate metabolic process",13,2,2.2,1,1,null,"GO:0006305","DNA alkylation",37,6,7.33,1,1]
["GO:0043413","macromolecule glycosylation",128,10,15.19,1,1,null,"GO:0010026","trichome differentiation",57,6,10.58,1,1,null,"GO:0009692","ethylene metabolic process",23,4,3.9,1,1,null,"GO:0044042","glucan metabolic process",162,37,32.08,1,1]
["GO:0006112","energy reserve metabolic process",14,2,1.66,1,1,null,"GO:0042274","ribosomal small subunit biogenesis",80,5,14.85,1,1,null,"GO:0022402","cell cycle process",622,48,105.44,1,1,null,"GO:1901334","lactone metabolic process",21,2,4.16,1,1]
["GO:0003006","developmental process involved in reproduction",2101,265,249.4,1,1,null,"GO:1903050","regulation of proteolysis involved in protein catabolic process",33,6,6.12,1,1,null,"GO:0022406","membrane docking",42,12,7.12,1,1,null,"GO:1901336","lactone biosynthetic process",16,2,3.17,1,1]
["GO:0003008","system process",20,3,2.37,1,1,null,"GO:0042278","purine nucleoside metabolic process",13,1,2.41,1,1,null,"GO:0010026","trichome differentiation",79,11,13.39,1,1,null,"GO:0005996","monosaccharide metabolic process",100,34,19.8,1,1]
["GO:0000394","RNA splicing, via endonucleolytic cleavage and ligation",14,1,1.66,1,1,null,"GO:0022406","membrane docking",39,2,7.24,1,1,null,"GO:0046036","CTP metabolic process",17,2,2.88,1,1,null,"GO:0042168","heme metabolic process",24,4,4.75,1,1]
["GO:0009668","plastid membrane organization",56,7,6.65,1,1,null,"GO:0044839","cell cycle G2/M phase transition",18,1,3.34,1,1,null,"GO:0009697","salicylic acid biosynthetic process",20,2,3.39,1,1,null,"GO:1901616","organic hydroxy compound catabolic process",22,5,4.36,1,1]
["GO:0048438","floral whorl development",157,19,18.64,1,1,null,"GO:0042221","response to chemical",3410,754,632.86,1,1,null,"GO:0034410","cell wall beta-glucan biosynthetic process",18,1,3.05,1,1,null,"GO:0048506","regulation of timing of meristematic phase transition",27,4,5.35,1,1]
["GO:0043449","cellular alkene metabolic process",23,5,2.73,1,1,null,"GO:0048465","corolla development",11,1,2.04,1,1,null,"GO:0031365","N-terminal protein amino acid modification",56,6,9.49,1,1,null,"GO:0022611","dormancy process",52,10,10.3,1,1]
["GO:0009653","anatomical structure morphogenesis",1376,204,163.34,1,1,null,"GO:0048466","androecium development",59,7,10.95,1,1,null,"GO:0006498","N-terminal protein lipidation",39,6,6.61,1,1,null,"GO:0022613","ribonucleoprotein complex biogenesis",394,118,78.03,1,1]
["GO:0097035","regulation of membrane lipid distribution",17,1,2.02,1,1,null,"GO:0048469","cell maturation",96,14,17.82,1,1,null,"GO:0097354","prenylation",11,1,1.86,1,1,null,"GO:0022616","DNA strand elongation",11,2,2.18,1,1]
["GO:0033750","ribosome localization",14,1,1.66,1,1,null,"GO:0034410","cell wall beta-glucan biosynthetic process",16,1,2.97,1,1,null,"GO:0051716","cellular response to stimulus",3240,781,549.23,1,1,null,"GO:1902850","microtubule cytoskeleton organization involved in mitosis",23,6,4.55,1,1]
["GO:0030522","intracellular receptor signaling pathway",19,2,2.26,1,1,null,"GO:0042214","terpene metabolic process",25,8,4.64,1,1,null,"GO:0048506","regulation of timing of meristematic phase transition",31,2,5.25,1,1,null,"GO:0044038","cell wall macromolecule biosynthetic process",58,10,11.49,1,1]
["GO:0009683","indoleacetic acid metabolic process",12,5,1.42,1,1,null,"GO:0045488","pectin metabolic process",92,17,17.07,1,1,null,"GO:0001932","regulation of protein phosphorylation",64,2,10.85,1,1,null,"GO:0042157","lipoprotein metabolic process",96,14,19.01,1,1]
["GO:0006139","nucleobase-containing compound metabolic process",5205,727,617.87,1,1,null,"GO:0043467","regulation of generation of precursor metabolites and energy",27,8,5.01,1,1,null,"GO:0071985","multivesicular body sorting pathway",33,9,5.59,1,1,null,"GO:0042158","lipoprotein biosynthetic process",95,14,18.81,1,1]
["GO:0019852","L-ascorbic acid metabolic process",21,1,2.49,1,1,null,"GO:0052386","cell wall thickening",22,3,4.08,1,1,null,"GO:0045088","regulation of innate immune response",92,15,15.6,1,1,null,"GO:0009838","abscission",16,2,3.17,1,1]
["GO:0042908","xenobiotic transport",38,2,4.51,1,1,null,"GO:0006163","purine nucleotide metabolic process",217,30,40.27,1,1,null,"GO:0045841","negative regulation of mitotic metaphase/anaphase transition",10,1,1.7,1,1,null,"GO:0006605","protein targeting",218,29,43.17,1,1]
["GO:0009688","abscisic acid biosynthetic process",24,2,2.85,1,1,null,"GO:0006165","nucleoside diphosphate phosphorylation",39,6,7.24,1,1,null,"GO:0000819","sister chromatid segregation",82,4,13.9,1,1,null,"GO:0042181","ketone biosynthetic process",33,3,6.54,1,1]
["GO:0009311","oligosaccharide metabolic process",71,5,8.43,1,1,null,"GO:0043450","alkene biosynthetic process",20,8,3.71,1,1,null,"GO:0000086","G2/M transition of mitotic cell cycle",29,4,4.92,1,1,null,"GO:0030705","cytoskeleton-dependent intracellular transport",20,2,3.96,1,1]
["GO:0009312","oligosaccharide biosynthetic process",35,2,4.15,1,1,null,"GO:0008033","tRNA processing",96,5,17.82,1,1,null,"GO:0045833","negative regulation of lipid metabolic process",12,3,2.03,1,1,null,"GO:0010257","NADH dehydrogenase complex assembly",24,1,4.75,1,1]
["GO:0032535","regulation of cellular component size",45,5,5.34,1,1,null,"GO:0008037","cell recognition",35,5,6.5,1,1,null,"GO:0000070","mitotic sister chromatid segregation",64,3,10.85,1,1,null,"GO:0031323","regulation of cellular metabolic process",2443,601,483.81,1,1]
["GO:0042060","wound healing",23,1,2.73,1,1,null,"GO:0009692","ethylene metabolic process",20,8,3.71,1,1,null,"GO:0045839","negative regulation of mitotic nuclear division",11,1,1.86,1,1,null,"GO:0006498","N-terminal protein lipidation",36,7,7.13,1,1]
["GO:0110096","cellular response to aldehyde",10,1,1.19,1,1,null,"GO:0006188","IMP biosynthetic process",14,1,2.6,1,1,null,"GO:0009653","anatomical structure morphogenesis",1376,190,233.25,1,1,null,"GO:0060255","regulation of macromolecule metabolic process",2884,703,571.14,1,1]
["GO:0051261","protein depolymerization",36,2,4.27,1,1,null,"GO:1905037","autophagosome organization",31,4,5.75,1,1,null,"GO:0000075","cell cycle checkpoint signaling",40,2,6.78,1,1,null,"GO:0110154","RNA decapping",13,3,2.57,1,1]
["GO:0021700","developmental maturation",330,42,39.17,1,1,null,"GO:0090066","regulation of anatomical structure size",37,5,6.87,1,1,null,"GO:0000076","DNA replication checkpoint signaling",16,1,2.71,1,1,null,"GO:0042126","nitrate metabolic process",11,5,2.18,1,1]
["GO:0033045","regulation of sister chromatid segregation",22,3,2.61,1,1,null,"GO:0052314","phytoalexin metabolic process",12,4,2.23,1,1,null,"GO:0031323","regulation of cellular metabolic process",2920,579,494.98,1,1,null,"GO:0034311","diol metabolic process",13,5,2.57,1,1]
["GO:0033046","negative regulation of sister chromatid segregation",10,1,1.19,1,1,null,"GO:0052315","phytoalexin biosynthetic process",12,4,2.23,1,1,null,"GO:0031324","negative regulation of cellular metabolic process",399,96,67.64,1,1,null,"GO:0002831","regulation of response to biotic stimulus",156,34,30.89,1,1]
["GO:0031163","metallo-sulfur cluster assembly",31,1,3.68,1,1,null,"GO:0052317","camalexin metabolic process",11,4,2.04,1,1,null,"GO:0031325","positive regulation of cellular metabolic process",599,135,101.54,1,1,null,"GO:0070647","protein modification by small protein conjugation or removal",98,29,19.41,1,1]
["GO:0033047","regulation of mitotic sister chromatid segregation",10,1,1.19,1,1,null,"GO:1903047","mitotic cell cycle process",133,11,24.68,1,1,null,"GO:0006458","de novo' protein folding",47,8,7.97,1,1,null,"GO:0005984","disaccharide metabolic process",49,14,9.7,1,1]
["GO:0033048","negative regulation of mitotic sister chromatid segregation",10,1,1.19,1,1,null,"GO:0050657","nucleic acid transport",52,7,9.65,1,1,null,"GO:0009683","indoleacetic acid metabolic process",12,3,2.03,1,1,null,"GO:0033108","mitochondrial respiratory chain complex assembly",39,2,7.72,1,1]
["GO:0009626","plant-type hypersensitive response",68,2,8.07,1,1,null,"GO:0070192","chromosome organization involved in meiotic cell cycle",36,1,6.68,1,1,null,"GO:0045017","glycerolipid biosynthetic process",115,22,19.49,1,1,null,"GO:0000819","sister chromatid segregation",62,14,12.28,1,1]
["GO:0009628","response to abiotic stimulus",4055,384,481.36,1,1,null,"GO:0048440","carpel development",53,7,9.84,1,1,null,"GO:2001251","negative regulation of chromosome organization",13,1,2.2,1,1,null,"GO:0019932","second-messenger-mediated signaling",36,4,7.13,1,1]
["GO:0043401","steroid hormone mediated signaling pathway",64,16,7.6,1,1,null,"GO:0034406","cell wall beta-glucan metabolic process",21,1,3.9,1,1,null,"GO:0006482","protein demethylation",15,1,2.54,1,1,null,"GO:1901607","alpha-amino acid biosynthetic process",144,25,28.52,1,1]
["GO:0071704","organic substance metabolic process",11211,1446,1330.83,1,1,null,"GO:0043413","macromolecule glycosylation",115,19,21.34,1,1,null,"GO:0030243","cellulose metabolic process",63,10,10.68,1,1,null,"GO:0031333","negative regulation of protein-containing complex assembly",12,3,2.38,1,1]
["GO:0051253","negative regulation of RNA metabolic process",188,17,22.32,1,1,null,"GO:1990066","energy quenching",13,3,2.41,1,1,null,"GO:0034406","cell wall beta-glucan metabolic process",23,1,3.9,1,1,null,"GO:0022604","regulation of cell morphogenesis",72,13,14.26,1,1]
["GO:0051254","positive regulation of RNA metabolic process",424,30,50.33,1,1,null,"GO:0006112","energy reserve metabolic process",12,3,2.23,1,1,null,"GO:0071941","nitrogen cycle metabolic process",17,8,2.88,1,1,null,"GO:0034620","cellular response to unfolded protein",31,3,6.14,1,1]
["GO:0051258","protein polymerization",38,2,4.51,1,1,null,"GO:0003006","developmental process involved in reproduction",1908,355,354.1,1,1,null,"GO:0045047","protein targeting to ER",37,1,6.27,1,1,null,"GO:0005976","polysaccharide metabolic process",312,60,61.79,1,1]
["GO:0051259","protein complex oligomerization",47,2,5.58,1,1,null,"GO:0032511","late endosome to vacuole transport via multivesicular body sorting pathway",25,1,4.64,1,1,null,"GO:0008150","biological_process",17202,2916,2916,1,1,null,"GO:0044706","multi-multicellular organism process",214,43,42.38,1,1]
["GO:0002682","regulation of immune system process",106,12,12.58,1,1,null,"GO:0009668","plastid membrane organization",54,7,10.02,1,1,null,"GO:0000018","regulation of DNA recombination",26,1,4.41,1,1,null,"GO:0008213","protein alkylation",76,20,15.05,1,1]
["GO:0002683","negative regulation of immune system process",26,5,3.09,1,1,null,"GO:0043449","cellular alkene metabolic process",20,8,3.71,1,1,null,"GO:0051701","biological process involved in interaction with host",17,4,2.88,1,1,null,"GO:1905957","regulation of cellular response to alcohol",102,28,20.2,1,1]
["GO:0032501","multicellular organismal process",4317,536,512.46,1,1,null,"GO:0009653","anatomical structure morphogenesis",1049,147,194.68,1,1,null,"GO:0008152","metabolic process",11857,1993,2009.94,1,1,null,"GO:0008214","protein dealkylation",15,4,2.97,1,1]
["GO:0002684","positive regulation of immune system process",57,6,6.77,1,1,null,"GO:0097035","regulation of membrane lipid distribution",17,4,3.16,1,1,null,"GO:0051702","biological process involved in interaction with symbiont",71,16,12.04,1,1,null,"GO:1905958","negative regulation of cellular response to alcohol",44,12,8.71,1,1]
["GO:0032504","multicellular organism reproduction",205,21,24.33,1,1,null,"GO:0033750","ribosome localization",15,2,2.78,1,1,null,"GO:0006473","protein acetylation",53,3,8.98,1,1,null,"GO:0006482","protein demethylation",15,4,2.97,1,1]
["GO:0032507","maintenance of protein location in cell",24,2,2.85,1,1,null,"GO:0030522","intracellular receptor signaling pathway",17,2,3.16,1,1,null,"GO:0071173","spindle assembly checkpoint signaling",10,1,1.7,1,1,null,"GO:0034641","cellular nitrogen compound metabolic process",5370,1166,1063.46,1,1]
["GO:0001101","response to acid chemical",1150,57,136.51,1,1,null,"GO:0006139","nucleobase-containing compound metabolic process",4610,654,855.56,1,1,null,"GO:0071174","mitotic spindle checkpoint signaling",10,1,1.7,1,1,null,"GO:0106354","tRNA surveillance",10,3,1.98,1,1]
["GO:0007346","regulation of mitotic cell cycle",69,8,8.19,1,1,null,"GO:0009687","abscisic acid metabolic process",33,6,6.12,1,1,null,"GO:0008154","actin polymerization or depolymerization",33,3,5.59,1,1,null,"GO:0055086","nucleobase-containing small molecule metabolic process",336,83,66.54,1,1]
["GO:0032392","DNA geometric change",25,8,2.97,1,1,null,"GO:0042908","xenobiotic transport",28,2,5.2,1,1,null,"GO:0006475","internal protein amino acid acetylation",39,3,6.61,1,1,null,"GO:0032886","regulation of microtubule-based process",16,4,3.17,1,1]
["GO:0000375","RNA splicing, via transesterification reactions",238,19,28.25,1,1,null,"GO:0009311","oligosaccharide metabolic process",61,13,11.32,1,1,null,"GO:0006476","protein deacetylation",10,2,1.7,1,1,null,"GO:0034645","cellular macromolecule biosynthetic process",899,185,178.04,1,1]
["GO:0000377","RNA splicing, via transesterification reactions with bulged adenosine as nucleophile",238,19,28.25,1,1,null,"GO:0009312","oligosaccharide biosynthetic process",29,6,5.38,1,1,null,"GO:0008156","negative regulation of DNA replication",10,1,1.7,1,1,null,"GO:0006473","protein acetylation",47,10,9.31,1,1]
["GO:0009648","photoperiodism",273,12,32.41,1,1,null,"GO:0032535","regulation of cellular component size",37,5,6.87,1,1,null,"GO:0070828","heterochromatin organization",41,4,6.95,1,1,null,"GO:0006475","internal protein amino acid acetylation",35,8,6.93,1,1]
["GO:0048193","Golgi vesicle transport",171,11,20.3,1,1,null,"GO:0009313","oligosaccharide catabolic process",16,2,2.97,1,1,null,"GO:0006479","protein methylation",83,4,14.07,1,1,null,"GO:0006476","protein deacetylation",10,2,1.98,1,1]
["GO:0160062","cutin-based cuticle development",18,4,2.14,1,1,null,"GO:0042060","wound healing",22,3,4.08,1,1,null,"GO:0031333","negative regulation of protein-containing complex assembly",12,2,2.03,1,1,null,"GO:0006479","protein methylation",76,20,15.05,1,1]
["GO:1902652","secondary alcohol metabolic process",10,2,1.19,1,1,null,"GO:0033015","tetrapyrrole catabolic process",45,13,8.35,1,1,null,"GO:1901360","organic cyclic compound metabolic process",6073,912,1029.47,1,1,null,"GO:1901463","regulation of tetrapyrrole biosynthetic process",27,7,5.35,1,1]
["GO:0051273","beta-glucan metabolic process",75,5,8.9,1,1,null,"GO:0046520","sphingoid biosynthetic process",12,2,2.23,1,1,null,"GO:0010562","positive regulation of phosphorus metabolic process",16,3,2.71,1,1,null,"GO:0055072","iron ion homeostasis",31,8,6.14,1,1]
["GO:0051274","beta-glucan biosynthetic process",69,5,8.19,1,1,null,"GO:0033043","regulation of organelle organization",117,8,21.71,1,1,null,"GO:0002253","activation of immune response",43,9,7.29,1,1,null,"GO:0055074","calcium ion homeostasis",39,8,7.72,1,1]
["GO:1902680","positive regulation of RNA biosynthetic process",332,28,39.41,1,1,null,"GO:0033044","regulation of chromosome organization",36,2,6.68,1,1,null,"GO:0010563","negative regulation of phosphorus metabolic process",14,1,2.37,1,1,null,"GO:0034637","cellular carbohydrate biosynthetic process",169,38,33.47,1,1]
["GO:0051223","regulation of protein transport",15,2,1.78,1,1,null,"GO:0002376","immune system process",212,31,39.34,1,1,null,"GO:0010564","regulation of cell cycle process",143,11,24.24,1,1,null,"GO:0010942","positive regulation of cell death",27,4,5.35,1,1]
["GO:0009309","amine biosynthetic process",36,8,4.27,1,1,null,"GO:0033045","regulation of sister chromatid segregation",18,2,3.34,1,1,null,"GO:0099587","inorganic ion import across plasma membrane",20,7,3.39,1,1,null,"GO:0071985","multivesicular body sorting pathway",33,8,6.54,1,1]
["GO:0031122","cytoplasmic microtubule organization",52,2,6.17,1,1,null,"GO:0031163","metallo-sulfur cluster assembly",30,7,5.57,1,1,null,"GO:0046520","sphingoid biosynthetic process",12,7,2.03,1,1,null,"GO:0016553","base conversion or substitution editing",26,1,5.15,1,1]
["GO:0051983","regulation of chromosome segregation",24,3,2.85,1,1,null,"GO:0043401","steroid hormone mediated signaling pathway",52,8,9.65,1,1,null,"GO:0010557","positive regulation of macromolecule biosynthetic process",358,90,60.69,1,1,null,"GO:0009566","fertilization",23,2,4.55,1,1]
["GO:1990748","cellular detoxification",40,1,4.75,1,1,null,"GO:0051258","protein polymerization",35,4,6.5,1,1,null,"GO:0097306","cellular response to alcohol",291,102,49.33,1,1,null,"GO:0035966","response to topologically incorrect protein",56,13,11.09,1,1]
["GO:0051985","negative regulation of chromosome segregation",10,1,1.19,1,1,null,"GO:0033037","polysaccharide localization",34,4,6.31,1,1,null,"GO:0046519","sphingoid metabolic process",16,7,2.71,1,1,null,"GO:0035967","cellular response to topologically incorrect protein",53,12,10.5,1,1]
["GO:0042770","signal transduction in response to DNA damage",16,1,1.9,1,1,null,"GO:0002682","regulation of immune system process",92,13,17.07,1,1,null,"GO:0000003","reproduction",2478,407,420.06,1,1,null,"GO:0052541","plant-type cell wall cellulose metabolic process",20,3,3.96,1,1]
["GO:0042773","ATP synthesis coupled electron transport",47,2,5.58,1,1,null,"GO:0002683","negative regulation of immune system process",25,2,4.64,1,1,null,"GO:0035670","plant-type ovary development",45,6,7.63,1,1,null,"GO:0008202","steroid metabolic process",49,8,9.7,1,1]
["GO:1902679","negative regulation of RNA biosynthetic process",174,16,20.66,1,1,null,"GO:0002684","positive regulation of immune system process",50,10,9.28,1,1,null,"GO:0022900","electron transport chain",112,30,18.99,1,1,null,"GO:0052543","callose deposition in cell wall",20,1,3.96,1,1]
["GO:0042044","fluid transport",33,2,3.92,1,1,null,"GO:0032502","developmental process",4312,758,800.26,1,1,null,"GO:0002218","activation of innate immune response",43,9,7.29,1,1,null,"GO:0046885","regulation of hormone biosynthetic process",13,3,2.57,1,1]
["GO:0046501","protoporphyrinogen IX metabolic process",13,4,1.54,1,1,null,"GO:0032504","multicellular organism reproduction",175,41,32.48,1,1,null,"GO:0042360","vitamin E metabolic process",15,7,2.54,1,1,null,"GO:0016577","histone demethylation",14,4,2.77,1,1]
["GO:0051241","negative regulation of multicellular organismal process",128,8,15.19,1,1,null,"GO:0001101","response to acid chemical",971,245,180.21,1,1,null,"GO:0042362","fat-soluble vitamin biosynthetic process",24,8,4.07,1,1,null,"GO:0009583","detection of light stimulus",20,7,3.96,1,1]
["GO:0042726","flavin-containing compound metabolic process",15,1,1.78,1,1,null,"GO:0007346","regulation of mitotic cell cycle",50,2,9.28,1,1,null,"GO:0009605","response to external stimulus",2405,613,407.68,1,1,null,"GO:1901420","negative regulation of response to alcohol",44,12,8.71,1,1]
["GO:0032350","regulation of hormone metabolic process",24,8,2.85,1,1,null,"GO:0032392","DNA geometric change",19,1,3.53,1,1,null,"GO:0009607","response to biotic stimulus",1990,498,337.34,1,1,null,"GO:0019757","glycosinolate metabolic process",132,23,26.14,1,1]
["GO:0042727","flavin-containing compound biosynthetic process",12,1,1.42,1,1,null,"GO:0000375","RNA splicing, via transesterification reactions",241,50,44.73,1,1,null,"GO:0006401","RNA catabolic process",128,22,21.7,1,1,null,"GO:0019758","glycosinolate biosynthetic process",50,6,9.9,1,1]
["GO:0010876","lipid localization",105,7,12.46,1,1,null,"GO:0000377","RNA splicing, via transesterification reactions with bulged adenosine as nucleophile",241,50,44.73,1,1,null,"GO:0006405","RNA export from nucleus",46,8,7.8,1,1,null,"GO:0019759","glycosinolate catabolic process",10,3,1.98,1,1]
["GO:0051246","regulation of protein metabolic process",342,33,40.6,1,1,null,"GO:0160062","cutin-based cuticle development",12,4,2.23,1,1,null,"GO:1901334","lactone metabolic process",25,7,4.24,1,1,null,"GO:0071941","nitrogen cycle metabolic process",14,5,2.77,1,1]
["GO:0051248","negative regulation of protein metabolic process",101,8,11.99,1,1,null,"GO:0051273","beta-glucan metabolic process",67,7,12.43,1,1,null,"GO:0046501","protoporphyrinogen IX metabolic process",13,2,2.2,1,1,null,"GO:0061572","actin filament bundle organization",14,3,2.77,1,1]
["GO:0046390","ribose phosphate biosynthetic process",125,24,14.84,1,1,null,"GO:0051274","beta-glucan biosynthetic process",61,7,11.32,1,1,null,"GO:0032446","protein modification by small protein conjugation",15,2,2.54,1,1,null,"GO:0097237","cellular response to toxic substance",34,3,6.73,1,1]
["GO:0040011","locomotion",26,2,3.09,1,1,null,"GO:0110053","regulation of actin filament organization",19,3,3.53,1,1,null,"GO:0042373","vitamin K metabolic process",10,1,1.7,1,1,null,"GO:0022411","cellular component disassembly",92,23,18.22,1,1]
["GO:0009605","response to external stimulus",2405,232,285.49,1,1,null,"GO:0051276","chromosome organization",155,8,28.77,1,1,null,"GO:0032434","regulation of proteasomal ubiquitin-dependent protein catabolic process",23,3,3.9,1,1,null,"GO:1901419","regulation of response to alcohol",102,28,20.2,1,1]
["GO:0009607","response to biotic stimulus",1990,183,236.23,1,1,null,"GO:1902680","positive regulation of RNA biosynthetic process",278,49,51.59,1,1,null,"GO:0007127","meiosis I",71,4,12.04,1,1,null,"GO:0043631","RNA polyadenylation",26,7,5.15,1,1]
["GO:0045184","establishment of protein localization",523,54,62.08,1,1,null,"GO:0051223","regulation of protein transport",15,2,2.78,1,1,null,"GO:0051053","negative regulation of DNA metabolic process",34,2,5.76,1,1,null,"GO:0022414","reproductive process",2202,489,436.08,1,1]
["GO:0045185","maintenance of protein location",24,2,2.85,1,1,null,"GO:0009308","amine metabolic process",84,13,15.59,1,1,null,"GO:0042327","positive regulation of phosphorylation",13,1,2.2,1,1,null,"GO:0043632","modification-dependent macromolecule catabolic process",405,112,80.21,1,1]
["GO:0052482","defense response by cell wall thickening",17,6,2.02,1,1,null,"GO:0009309","amine biosynthetic process",31,5,5.75,1,1,null,"GO:0019362","pyridine nucleotide metabolic process",57,15,9.66,1,1,null,"GO:0043633","polyadenylation-dependent RNA catabolic process",12,5,2.38,1,1]
["GO:1900673","olefin metabolic process",23,5,2.73,1,1,null,"GO:0031122","cytoplasmic microtubule organization",47,5,8.72,1,1,null,"GO:0019363","pyridine nucleotide biosynthetic process",14,2,2.37,1,1,null,"GO:0043634","polyadenylation-dependent ncRNA catabolic process",12,5,2.38,1,1]
["GO:0051234","establishment of localization",2002,189,237.65,1,1,null,"GO:0051983","regulation of chromosome segregation",19,2,3.53,1,1,null,"GO:0048608","reproductive structure development",1931,321,327.33,1,1,null,"GO:0051169","nuclear transport",108,42,21.39,1,1]
["GO:1900674","olefin biosynthetic process",23,5,2.73,1,1,null,"GO:0031124","mRNA 3'-end processing",33,4,6.12,1,1,null,"GO:0051084","de novo' post-translational protein folding",42,8,7.12,1,1,null,"GO:0030832","regulation of actin filament length",15,3,2.97,1,1]
["GO:0051235","maintenance of location",64,5,7.6,1,1,null,"GO:0045165","cell fate commitment",45,4,8.35,1,1,null,"GO:0006986","response to unfolded protein",32,6,5.42,1,1,null,"GO:0030833","regulation of actin filament polymerization",13,3,2.57,1,1]
["GO:0051236","establishment of RNA localization",52,6,6.17,1,1,null,"GO:0042773","ATP synthesis coupled electron transport",48,9,8.91,1,1,null,"GO:0016128","phytosteroid metabolic process",17,2,2.88,1,1,null,"GO:0008064","regulation of actin polymerization or depolymerization",15,3,2.97,1,1]
["GO:0051238","sequestering of metal ion",12,3,1.42,1,1,null,"GO:1902679","negative regulation of RNA biosynthetic process",145,28,26.91,1,1,null,"GO:0035601","protein deacylation",12,2,2.03,1,1,null,"GO:0010054","trichoblast differentiation",101,22,20,1,1]
["GO:0032386","regulation of intracellular transport",15,2,1.78,1,1,null,"GO:0042044","fluid transport",20,2,3.71,1,1,null,"GO:0006163","purine nucleotide metabolic process",237,50,40.18,1,1,null,"GO:0018195","peptidyl-arginine modification",11,6,2.18,1,1]
["GO:1901292","nucleoside phosphate catabolic process",17,2,2.02,1,1,null,"GO:0046501","protoporphyrinogen IX metabolic process",13,2,2.41,1,1,null,"GO:0007135","meiosis II",21,1,3.56,1,1,null,"GO:0018198","peptidyl-cysteine modification",17,4,3.37,1,1]
["GO:1901293","nucleoside phosphate biosynthetic process",155,30,18.4,1,1,null,"GO:0042726","flavin-containing compound metabolic process",15,1,2.78,1,1,null,"GO:0006165","nucleoside diphosphate phosphorylation",47,13,7.97,1,1,null,"GO:0048608","reproductive structure development",1733,404,343.2,1,1]
["GO:0042743","hydrogen peroxide metabolic process",45,3,5.34,1,1,null,"GO:0032350","regulation of hormone metabolic process",17,2,3.16,1,1,null,"GO:0071265","L-methionine biosynthetic process",12,2,2.03,1,1,null,"GO:0071900","regulation of protein serine/threonine kinase activity",22,1,4.36,1,1]
["GO:0043155","negative regulation of photosynthesis, light reaction",11,1,1.31,1,1,null,"GO:0042727","flavin-containing compound biosynthetic process",12,1,2.23,1,1,null,"GO:0015980","energy derivation by oxidation of organic compounds",141,31,23.9,1,1,null,"GO:0051179","localization",2078,461,411.52,1,1]
["GO:0015980","energy derivation by oxidation of organic compounds",141,16,16.74,1,1,null,"GO:0051247","positive regulation of protein metabolic process",77,10,14.29,1,1,null,"GO:0042330","taxis",26,9,4.41,1,1,null,"GO:0010769","regulation of cell morphogenesis involved in differentiation",24,3,4.75,1,1]
["GO:1902644","tertiary alcohol metabolic process",39,3,4.63,1,1,null,"GO:0040011","locomotion",29,6,5.38,1,1,null,"GO:0005991","trehalose metabolic process",16,6,2.71,1,1,null,"GO:0033238","regulation of amine metabolic process",12,1,2.38,1,1]
["GO:1902645","tertiary alcohol biosynthetic process",24,2,2.85,1,1,null,"GO:0009605","response to external stimulus",1913,387,355.03,1,1,null,"GO:0005996","monosaccharide metabolic process",111,25,18.82,1,1,null,"GO:0034472","snRNA 3'-end processing",14,1,2.77,1,1]
["GO:0007602","phototransduction",19,3,2.26,1,1,null,"GO:0009607","response to biotic stimulus",1591,325,295.27,1,1,null,"GO:0061726","mitochondrion disassembly",18,5,3.05,1,1,null,"GO:0051129","negative regulation of cellular component organization",30,5,5.94,1,1]
["GO:0015977","carbon fixation",17,1,2.02,1,1,null,"GO:0045184","establishment of protein localization",513,67,95.21,1,1,null,"GO:0051028","mRNA transport",35,8,5.93,1,1,null,"GO:0022402","cell cycle process",446,92,88.32,1,1]
["GO:1900618","regulation of shoot system morphogenesis",13,1,1.54,1,1,null,"GO:0045185","maintenance of protein location",23,2,4.27,1,1,null,"GO:0044419","biological process involved in interspecies interaction between organisms",2001,500,339.2,1,1,null,"GO:1903050","regulation of proteolysis involved in protein catabolic process",33,4,6.54,1,1]
["GO:0046364","monosaccharide biosynthetic process",45,3,5.34,1,1,null,"GO:0052482","defense response by cell wall thickening",13,1,2.41,1,1,null,"GO:1903409","reactive oxygen species biosynthetic process",27,8,4.58,1,1,null,"GO:0042278","purine nucleoside metabolic process",13,3,2.57,1,1]
["GO:0046365","monosaccharide catabolic process",12,1,1.42,1,1,null,"GO:1900673","olefin metabolic process",20,8,3.71,1,1,null,"GO:0016143","S-glycoside metabolic process",211,37,35.77,1,1,null,"GO:0022406","membrane docking",39,11,7.72,1,1]
["GO:1901990","regulation of mitotic cell cycle phase transition",48,7,5.7,1,1,null,"GO:1900674","olefin biosynthetic process",20,8,3.71,1,1,null,"GO:0016144","S-glycoside biosynthetic process",86,11,14.58,1,1,null,"GO:1903052","positive regulation of proteolysis involved in protein catabolic process",25,2,4.95,1,1]
["GO:1905818","regulation of chromosome separation",14,2,1.66,1,1,null,"GO:0051235","maintenance of location",60,17,11.14,1,1,null,"GO:0016145","S-glycoside catabolic process",15,5,2.54,1,1,null,"GO:0044839","cell cycle G2/M phase transition",18,5,3.56,1,1]
["GO:1905819","negative regulation of chromosome separation",10,1,1.19,1,1,null,"GO:0051236","establishment of RNA localization",52,7,9.65,1,1,null,"GO:0031425","chloroplast RNA processing",25,1,4.24,1,1,null,"GO:0048465","corolla development",11,2,2.18,1,1]
["GO:0010833","telomere maintenance via telomere lengthening",14,3,1.66,1,1,null,"GO:0032386","regulation of intracellular transport",15,2,2.78,1,1,null,"GO:0070585","protein localization to mitochondrion",54,2,9.15,1,1,null,"GO:0048466","androecium development",59,17,11.68,1,1]
["GO:0046351","disaccharide biosynthetic process",28,2,3.32,1,1,null,"GO:1901293","nucleoside phosphate biosynthetic process",145,17,26.91,1,1,null,"GO:0090066","regulation of anatomical structure size",45,6,7.63,1,1,null,"GO:0048469","cell maturation",96,22,19.01,1,1]
["GO:0006278","RNA-templated DNA biosynthetic process",13,3,1.54,1,1,null,"GO:0042743","hydrogen peroxide metabolic process",41,12,7.61,1,1,null,"GO:0070589","cellular component macromolecule biosynthetic process",78,4,13.22,1,1,null,"GO:0034410","cell wall beta-glucan biosynthetic process",16,3,3.17,1,1]
["GO:0045143","homologous chromosome segregation",31,2,3.68,1,1,null,"GO:0015980","energy derivation by oxidation of organic compounds",134,27,24.87,1,1,null,"GO:0006913","nucleocytoplasmic transport",107,15,18.14,1,1,null,"GO:0042214","terpene metabolic process",25,4,4.95,1,1]
["GO:0045144","meiotic sister chromatid segregation",15,1,1.78,1,1,null,"GO:1902644","tertiary alcohol metabolic process",33,6,6.12,1,1,null,"GO:0015977","carbon fixation",17,7,2.88,1,1,null,"GO:0045488","pectin metabolic process",92,13,18.22,1,1]
["GO:0031109","microtubule polymerization or depolymerization",33,3,3.92,1,1,null,"GO:0140962","multicellular organismal-level chemical homeostasis",19,6,3.53,1,1,null,"GO:0018210","peptidyl-threonine modification",12,3,2.03,1,1,null,"GO:0043467","regulation of generation of precursor metabolites and energy",27,4,5.35,1,1]
["GO:0071824","protein-DNA complex subunit organization",69,10,8.19,1,1,null,"GO:1902645","tertiary alcohol biosynthetic process",23,6,4.27,1,1,null,"GO:0006188","IMP biosynthetic process",14,1,2.37,1,1,null,"GO:0052386","cell wall thickening",22,2,4.36,1,1]
["GO:1903825","organic acid transmembrane transport",67,10,7.95,1,1,null,"GO:0007602","phototransduction",18,4,3.34,1,1,null,"GO:0043467","regulation of generation of precursor metabolites and energy",31,14,5.25,1,1,null,"GO:0034440","lipid oxidation",50,19,9.9,1,1]
["GO:0006220","pyrimidine nucleotide metabolic process",32,11,3.8,1,1,null,"GO:0000303","response to superoxide",12,4,2.23,1,1,null,"GO:0051049","regulation of transport",100,17,16.95,1,1,null,"GO:0006165","nucleoside diphosphate phosphorylation",39,15,7.72,1,1]
["GO:0071826","ribonucleoprotein complex subunit organization",124,26,14.72,1,1,null,"GO:0015977","carbon fixation",15,3,2.78,1,1,null,"GO:0046653","tetrahydrofolate metabolic process",27,4,4.58,1,1,null,"GO:0017004","cytochrome complex assembly",14,1,2.77,1,1]
["GO:0070297","regulation of phosphorelay signal transduction system",25,7,2.97,1,1,null,"GO:1900618","regulation of shoot system morphogenesis",11,1,2.04,1,1,null,"GO:0019318","hexose metabolic process",77,19,13.05,1,1,null,"GO:0043450","alkene biosynthetic process",20,4,3.96,1,1]
["GO:0070298","negative regulation of phosphorelay signal transduction system",16,4,1.9,1,1,null,"GO:0000305","response to oxygen radical",12,4,2.23,1,1,null,"GO:0043450","alkene biosynthetic process",23,4,3.9,1,1,null,"GO:0008033","tRNA processing",96,16,19.01,1,1]
["GO:0061458","reproductive system development",1932,251,229.34,1,1,null,"GO:0018210","peptidyl-threonine modification",12,1,2.23,1,1,null,"GO:0032950","regulation of beta-glucan metabolic process",19,4,3.22,1,1,null,"GO:0071025","RNA surveillance",16,5,3.17,1,1]
["GO:0006986","response to unfolded protein",32,7,3.8,1,1,null,"GO:0046364","monosaccharide biosynthetic process",40,5,7.42,1,1,null,"GO:0019319","hexose biosynthetic process",26,6,4.41,1,1,null,"GO:0071027","nuclear RNA surveillance",15,5,2.97,1,1]
["GO:0036293","response to decreased oxygen levels",279,32,33.12,1,1,null,"GO:1901990","regulation of mitotic cell cycle phase transition",32,1,5.94,1,1,null,"GO:0032951","regulation of beta-glucan biosynthetic process",19,4,3.22,1,1,null,"GO:0071029","nuclear ncRNA surveillance",12,5,2.38,1,1]
["GO:0036294","cellular response to decreased oxygen levels",203,29,24.1,1,1,null,"GO:1905818","regulation of chromosome separation",10,1,1.86,1,1,null,"GO:0006935","chemotaxis",26,9,4.41,1,1,null,"GO:1902532","negative regulation of intracellular signal transduction",19,4,3.76,1,1]
["GO:0006972","hyperosmotic response",69,5,8.19,1,1,null,"GO:0006275","regulation of DNA replication",28,6,5.2,1,1,null,"GO:0097435","supramolecular fiber organization",154,17,26.11,1,1,null,"GO:0009692","ethylene metabolic process",20,4,3.96,1,1]
["GO:0071840","cellular component organization or biogenesis",3151,486,374.05,1,1,null,"GO:0046351","disaccharide biosynthetic process",23,6,4.27,1,1,null,"GO:0032956","regulation of actin cytoskeleton organization",33,2,5.59,1,1,null,"GO:0006188","IMP biosynthetic process",14,4,2.77,1,1]
["GO:0033865","nucleoside bisphosphate metabolic process",60,5,7.12,1,1,null,"GO:0016482","cytosolic transport",33,5,6.12,1,1,null,"GO:0018231","peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine",19,2,3.22,1,1,null,"GO:0090066","regulation of anatomical structure size",37,10,7.33,1,1]
["GO:0033866","nucleoside bisphosphate biosynthetic process",37,4,4.39,1,1,null,"GO:0045143","homologous chromosome segregation",22,1,4.08,1,1,null,"GO:0002764","immune response-regulating signaling pathway",32,9,5.42,1,1,null,"GO:0052314","phytoalexin metabolic process",12,6,2.38,1,1]
["GO:0043144","sno(s)RNA processing",16,2,1.9,1,1,null,"GO:0031109","microtubule polymerization or depolymerization",25,1,4.64,1,1,null,"GO:1901463","regulation of tetrapyrrole biosynthetic process",31,7,5.25,1,1,null,"GO:0052315","phytoalexin biosynthetic process",12,6,2.38,1,1]
["GO:0015931","nucleobase-containing compound transport",96,11,11.4,1,1,null,"GO:0006220","pyrimidine nucleotide metabolic process",29,2,5.38,1,1,null,"GO:0043487","regulation of RNA stability",64,10,10.85,1,1,null,"GO:0052317","camalexin metabolic process",11,6,2.18,1,1]
["GO:0046653","tetrahydrofolate metabolic process",27,6,3.21,1,1,null,"GO:0006221","pyrimidine nucleotide biosynthetic process",29,2,5.38,1,1,null,"GO:0043488","regulation of mRNA stability",60,10,10.17,1,1,null,"GO:0071046","nuclear polyadenylation-dependent ncRNA catabolic process",12,5,2.38,1,1]
["GO:0015936","coenzyme A metabolic process",16,1,1.9,1,1,null,"GO:0070297","regulation of phosphorelay signal transduction system",23,5,4.27,1,1,null,"GO:0032989","cellular component morphogenesis",29,4,4.92,1,1,null,"GO:0031407","oxylipin metabolic process",16,1,3.17,1,1]
["GO:0016441","post-transcriptional gene silencing",60,2,7.12,1,1,null,"GO:0070298","negative regulation of phosphorelay signal transduction system",15,4,2.78,1,1,null,"GO:0006112","energy reserve metabolic process",14,5,2.37,1,1,null,"GO:0050657","nucleic acid transport",52,16,10.3,1,1]
["GO:0034293","sexual sporulation",32,2,3.8,1,1,null,"GO:0061458","reproductive system development",1734,319,321.81,1,1,null,"GO:0034293","sexual sporulation",32,7,5.42,1,1,null,"GO:0034406","cell wall beta-glucan metabolic process",21,3,4.16,1,1]
["GO:0035825","homologous recombination",62,7,7.36,1,1,null,"GO:0045132","meiotic chromosome segregation",41,1,7.61,1,1,null,"GO:0002757","immune response-activating signaling pathway",32,9,5.42,1,1,null,"GO:0043413","macromolecule glycosylation",115,10,22.77,1,1]
["GO:0009414","response to water deprivation",1041,50,123.57,1,1,null,"GO:0006986","response to unfolded protein",31,9,5.75,1,1,null,"GO:0016108","tetraterpenoid metabolic process",36,9,6.1,1,1,null,"GO:1990066","energy quenching",13,3,2.57,1,1]
["GO:0018209","peptidyl-serine modification",87,3,10.33,1,1,null,"GO:0036293","response to decreased oxygen levels",230,56,42.69,1,1,null,"GO:0032970","regulation of actin filament-based process",34,2,5.76,1,1,null,"GO:0006112","energy reserve metabolic process",12,2,2.38,1,1]
["GO:1901988","negative regulation of cell cycle phase transition",41,8,4.87,1,1,null,"GO:0036294","cellular response to decreased oxygen levels",168,43,31.18,1,1,null,"GO:0016109","tetraterpenoid biosynthetic process",27,6,4.58,1,1,null,"GO:1990069","stomatal opening",15,1,2.97,1,1]
["GO:0046341","CDP-diacylglycerol metabolic process",14,2,1.66,1,1,null,"GO:0071840","cellular component organization or biogenesis",2754,450,511.11,1,1,null,"GO:0015931","nucleobase-containing compound transport",96,12,16.27,1,1,null,"GO:0000394","RNA splicing, via endonucleolytic cleavage and ligation",14,2,2.77,1,1]
["GO:0051084","de novo' post-translational protein folding",42,11,4.99,1,1,null,"GO:0033865","nucleoside bisphosphate metabolic process",54,8,10.02,1,1,null,"GO:0006119","oxidative phosphorylation",54,9,9.15,1,1,null,"GO:0009668","plastid membrane organization",54,8,10.69,1,1]
["GO:0033875","ribonucleoside bisphosphate metabolic process",60,5,7.12,1,1,null,"GO:0033866","nucleoside bisphosphate biosynthetic process",34,6,6.31,1,1,null,"GO:0044403","biological process involved in symbiotic interaction",91,21,15.43,1,1,null,"GO:0048438","floral whorl development",129,28,25.55,1,1]
["GO:0000459","exonucleolytic trimming involved in rRNA processing",11,1,1.31,1,1,null,"GO:0015936","coenzyme A metabolic process",15,1,2.78,1,1,null,"GO:0006903","vesicle targeting",16,2,2.71,1,1,null,"GO:0043449","cellular alkene metabolic process",20,4,3.96,1,1]
["GO:0043102","amino acid salvage",10,2,1.19,1,1,null,"GO:0034293","sexual sporulation",23,3,4.27,1,1,null,"GO:0005976","polysaccharide metabolic process",385,49,65.26,1,1,null,"GO:0033750","ribosome localization",15,5,2.97,1,1]
["GO:0006935","chemotaxis",26,2,3.09,1,1,null,"GO:0051052","regulation of DNA metabolic process",103,21,19.12,1,1,null,"GO:0031401","positive regulation of protein modification process",36,4,6.1,1,1,null,"GO:0030522","intracellular receptor signaling pathway",17,2,3.37,1,1]
["GO:0046337","phosphatidylethanolamine metabolic process",12,1,1.42,1,1,null,"GO:0035825","homologous recombination",48,3,8.91,1,1,null,"GO:0008213","protein alkylation",83,4,14.07,1,1,null,"GO:0006139","nucleobase-containing compound metabolic process",4610,1000,912.95,1,1]
["GO:0046618","xenobiotic export from cell",32,2,3.8,1,1,null,"GO:0018209","peptidyl-serine modification",80,9,14.85,1,1,null,"GO:0008214","protein dealkylation",15,1,2.54,1,1,null,"GO:0019852","L-ascorbic acid metabolic process",19,2,3.76,1,1]
["GO:0006206","pyrimidine nucleobase metabolic process",17,4,2.02,1,1,null,"GO:1901987","regulation of cell cycle phase transition",46,3,8.54,1,1,null,"GO:0046618","xenobiotic export from cell",32,13,5.42,1,1,null,"GO:0009688","abscisic acid biosynthetic process",23,5,4.55,1,1]
["GO:0006090","pyruvate metabolic process",78,6,9.26,1,1,null,"GO:1901988","negative regulation of cell cycle phase transition",26,2,4.83,1,1,null,"GO:0018209","peptidyl-serine modification",87,13,14.75,1,1,null,"GO:0009311","oligosaccharide metabolic process",61,19,12.08,1,1]
["GO:0001932","regulation of protein phosphorylation",64,7,7.6,1,1,null,"GO:0046341","CDP-diacylglycerol metabolic process",13,4,2.41,1,1,null,"GO:0006139","nucleobase-containing compound metabolic process",5205,723,882.33,1,1,null,"GO:0033013","tetrapyrrole metabolic process",249,50,49.31,1,1]
["GO:0051028","mRNA transport",35,2,4.15,1,1,null,"GO:0000469","cleavage involved in rRNA processing",25,1,4.64,1,1,null,"GO:0043413","macromolecule glycosylation",128,5,21.7,1,1,null,"GO:0042060","wound healing",22,6,4.36,1,1]
["GO:0051783","regulation of nuclear division",30,3,3.56,1,1,null,"GO:0051084","de novo' post-translational protein folding",41,16,7.61,1,1,null,"GO:0009310","amine catabolic process",10,3,1.7,1,1,null,"GO:0033015","tetrapyrrole catabolic process",45,11,8.91,1,1]
["GO:0051784","negative regulation of nuclear division",16,2,1.9,1,1,null,"GO:0033875","ribonucleoside bisphosphate metabolic process",54,8,10.02,1,1,null,"GO:0009311","oligosaccharide metabolic process",71,29,12.04,1,1,null,"GO:0046520","sphingoid biosynthetic process",12,4,2.38,1,1]
["GO:0034250","positive regulation of amide metabolic process",19,4,2.26,1,1,null,"GO:0030641","regulation of cellular pH",26,4,4.83,1,1,null,"GO:0052541","plant-type cell wall cellulose metabolic process",22,1,3.73,1,1,null,"GO:0002376","immune system process",212,46,41.98,1,1]
["GO:0000478","endonucleolytic cleavage involved in rRNA processing",12,3,1.42,1,1,null,"GO:0006935","chemotaxis",29,6,5.38,1,1,null,"GO:0009312","oligosaccharide biosynthetic process",35,13,5.93,1,1,null,"GO:0033045","regulation of sister chromatid segregation",18,2,3.56,1,1]
["GO:0070988","demethylation",42,3,4.99,1,1,null,"GO:0046337","phosphatidylethanolamine metabolic process",10,2,1.86,1,1,null,"GO:1901420","negative regulation of response to alcohol",52,17,8.81,1,1,null,"GO:0031163","metallo-sulfur cluster assembly",30,10,5.94,1,1]
["GO:0010562","positive regulation of phosphorus metabolic process",16,2,1.9,1,1,null,"GO:0071806","protein transmembrane transport",92,25,17.07,1,1,null,"GO:0043449","cellular alkene metabolic process",23,4,3.9,1,1,null,"GO:0043401","steroid hormone mediated signaling pathway",52,11,10.3,1,1]
["GO:0070972","protein localization to endoplasmic reticulum",48,7,5.7,1,1,null,"GO:0046618","xenobiotic export from cell",24,2,4.45,1,1,null,"GO:0007264","small GTPase mediated signal transduction",28,3,4.75,1,1,null,"GO:0009629","response to gravity",72,21,14.26,1,1]
["GO:0006900","vesicle budding from membrane",41,3,4.87,1,1,null,"GO:0051028","mRNA transport",35,6,6.5,1,1,null,"GO:0033108","mitochondrial respiratory chain complex assembly",41,1,6.95,1,1,null,"GO:0051258","protein polymerization",35,4,6.93,1,1]
["GO:0034284","response to monosaccharide",74,10,8.78,1,1,null,"GO:0051783","regulation of nuclear division",24,1,4.45,1,1,null,"GO:1901419","regulation of response to alcohol",119,41,20.17,1,1,null,"GO:0033037","polysaccharide localization",34,3,6.73,1,1]
["GO:0034285","response to disaccharide",72,11,8.55,1,1,null,"GO:0034250","positive regulation of amide metabolic process",17,2,3.16,1,1,null,"GO:0051552","flavone metabolic process",18,3,3.05,1,1,null,"GO:0002682","regulation of immune system process",92,18,18.22,1,1]
["GO:0006903","vesicle targeting",16,1,1.9,1,1,null,"GO:0000478","endonucleolytic cleavage involved in rRNA processing",12,1,2.23,1,1,null,"GO:0051553","flavone biosynthetic process",17,3,2.88,1,1,null,"GO:0002683","negative regulation of immune system process",25,4,4.95,1,1]
["GO:0015766","disaccharide transport",14,2,1.66,1,1,null,"GO:0010562","positive regulation of phosphorus metabolic process",13,1,2.41,1,1,null,"GO:0034284","response to monosaccharide",74,18,12.54,1,1,null,"GO:0006109","regulation of carbohydrate metabolic process",68,20,13.47,1,1]
["GO:0009403","toxin biosynthetic process",17,7,2.02,1,1,null,"GO:0010563","negative regulation of phosphorus metabolic process",13,1,2.41,1,1,null,"GO:0051554","flavonol metabolic process",18,3,3.05,1,1,null,"GO:0002684","positive regulation of immune system process",50,13,9.9,1,1]
["GO:0009404","toxin metabolic process",46,15,5.46,1,1,null,"GO:0070972","protein localization to endoplasmic reticulum",47,7,8.72,1,1,null,"GO:0120252","hydrocarbon metabolic process",55,13,9.32,1,1,null,"GO:0001101","response to acid chemical",971,245,192.29,1,1]
["GO:0051049","regulation of transport",100,11,11.87,1,1,null,"GO:0034285","response to disaccharide",56,11,10.39,1,1,null,"GO:0035383","thioester metabolic process",43,8,7.29,1,1,null,"GO:0032392","DNA geometric change",19,3,3.76,1,1]
["GO:0070925","organelle assembly",162,23,19.23,1,1,null,"GO:0009403","toxin biosynthetic process",12,4,2.23,1,1,null,"GO:0035384","thioester biosynthetic process",23,3,3.9,1,1,null,"GO:0000375","RNA splicing, via transesterification reactions",241,56,47.73,1,1]
["GO:0006066","alcohol metabolic process",134,9,15.91,1,1,null,"GO:0009404","toxin metabolic process",35,12,6.5,1,1,null,"GO:0010647","positive regulation of cell communication",85,23,14.41,1,1,null,"GO:0048193","Golgi vesicle transport",165,39,32.68,1,1]
["GO:0051716","cellular response to stimulus",3240,325,384.61,1,1,null,"GO:0051049","regulation of transport",86,10,15.96,1,1,null,"GO:0010648","negative regulation of cell communication",102,23,17.29,1,1,null,"GO:0160062","cutin-based cuticle development",12,2,2.38,1,1]
["GO:0034220","monoatomic ion transmembrane transport",161,15,19.11,1,1,null,"GO:0010558","negative regulation of macromolecule biosynthetic process",230,35,42.69,1,1,null,"GO:0034220","monoatomic ion transmembrane transport",161,36,27.29,1,1,null,"GO:1902652","secondary alcohol metabolic process",10,6,1.98,1,1]
["GO:0070918","regulatory ncRNA processing",62,2,7.36,1,1,null,"GO:0140056","organelle localization by membrane tethering",39,2,7.24,1,1,null,"GO:0030865","cortical cytoskeleton organization",56,6,9.49,1,1,null,"GO:0051273","beta-glucan metabolic process",67,16,13.27,1,1]
["GO:1900424","regulation of defense response to bacterium",46,3,5.46,1,1,null,"GO:0070925","organelle assembly",146,15,27.1,1,1,null,"GO:0007276","gamete generation",57,7,9.66,1,1,null,"GO:0042759","long-chain fatty acid biosynthetic process",26,4,5.15,1,1]
["GO:0046490","isopentenyl diphosphate metabolic process",21,1,2.49,1,1,null,"GO:0006066","alcohol metabolic process",118,22,21.9,1,1,null,"GO:0010639","negative regulation of organelle organization",33,3,5.59,1,1,null,"GO:0009636","response to toxic substance",106,22,20.99,1,1]
["GO:0015772","oligosaccharide transport",14,2,1.66,1,1,null,"GO:0051716","cellular response to stimulus",2742,533,508.88,1,1,null,"GO:0043401","steroid hormone mediated signaling pathway",64,6,10.85,1,1,null,"GO:1902680","positive regulation of RNA biosynthetic process",278,69,55.05,1,1]
["GO:0046496","nicotinamide nucleotide metabolic process",56,5,6.65,1,1,null,"GO:0034220","monoatomic ion transmembrane transport",135,23,25.05,1,1,null,"GO:0030091","protein repair",13,4,2.2,1,1,null,"GO:0051223","regulation of protein transport",15,2,2.97,1,1]
["GO:0006085","acetyl-CoA biosynthetic process",19,3,2.26,1,1,null,"GO:0015780","nucleotide-sugar transmembrane transport",21,2,3.9,1,1,null,"GO:0031163","metallo-sulfur cluster assembly",31,6,5.25,1,1,null,"GO:0009309","amine biosynthetic process",31,7,6.14,1,1]
["GO:0043269","regulation of monoatomic ion transport",27,4,3.21,1,1,null,"GO:0070918","regulatory ncRNA processing",60,6,11.14,1,1,null,"GO:0031167","rRNA methylation",23,1,3.9,1,1,null,"GO:0031122","cytoplasmic microtubule organization",47,8,9.31,1,1]
["GO:0009199","ribonucleoside triphosphate metabolic process",101,11,11.99,1,1,null,"GO:1900424","regulation of defense response to bacterium",36,8,6.68,1,1,null,"GO:0034219","carbohydrate transmembrane transport",21,4,3.56,1,1,null,"GO:0051983","regulation of chromosome segregation",19,2,3.76,1,1]
["GO:0006766","vitamin metabolic process",95,7,11.28,1,1,null,"GO:0018022","peptidyl-lysine methylation",50,3,9.28,1,1,null,"GO:0009309","amine biosynthetic process",36,6,6.1,1,1,null,"GO:0031124","mRNA 3'-end processing",33,7,6.54,1,1]
["GO:0035592","establishment of protein localization to extracellular region",21,1,2.49,1,1,null,"GO:0046490","isopentenyl diphosphate metabolic process",19,1,3.53,1,1,null,"GO:1901990","regulation of mitotic cell cycle phase transition",48,5,8.14,1,1,null,"GO:0042770","signal transduction in response to DNA damage",13,3,2.57,1,1]
["GO:0034243","regulation of transcription elongation by RNA polymerase II",20,2,2.37,1,1,null,"GO:0046496","nicotinamide nucleotide metabolic process",52,11,9.65,1,1,null,"GO:1901991","negative regulation of mitotic cell cycle phase transition",25,2,4.24,1,1,null,"GO:1902679","negative regulation of RNA biosynthetic process",145,42,28.72,1,1]
["GO:0022904","respiratory electron transport chain",51,2,6.05,1,1,null,"GO:0034219","carbohydrate transmembrane transport",16,2,2.97,1,1,null,"GO:0034248","regulation of amide metabolic process",119,21,20.17,1,1,null,"GO:0042044","fluid transport",20,8,3.96,1,1]
["GO:0006073","cellular glucan metabolic process",187,22,22.2,1,1,null,"GO:0009199","ribonucleoside triphosphate metabolic process",90,9,16.7,1,1,null,"GO:0034249","negative regulation of amide metabolic process",75,12,12.71,1,1,null,"GO:0046501","protoporphyrinogen IX metabolic process",13,3,2.57,1,1]
["GO:0070201","regulation of establishment of protein localization",15,2,1.78,1,1,null,"GO:0035592","establishment of protein localization to extracellular region",21,1,3.9,1,1,null,"GO:0042445","hormone metabolic process",96,13,16.27,1,1,null,"GO:0051241","negative regulation of multicellular organismal process",108,31,21.39,1,1]
["GO:0048284","organelle fusion",77,10,9.14,1,1,null,"GO:0140029","exocytic process",13,2,2.41,1,1,null,"GO:0042446","hormone biosynthetic process",45,6,7.63,1,1,null,"GO:0032350","regulation of hormone metabolic process",17,4,3.37,1,1]
["GO:0034248","regulation of amide metabolic process",119,15,14.13,1,1,null,"GO:0006073","cellular glucan metabolic process",158,20,29.32,1,1,null,"GO:0006261","DNA-templated DNA replication",131,8,22.21,1,1,null,"GO:0010876","lipid localization",89,15,17.63,1,1]
["GO:0048285","organelle fission",220,20,26.12,1,1,null,"GO:0070201","regulation of establishment of protein localization",15,2,2.78,1,1,null,"GO:0032101","regulation of response to external stimulus",203,37,34.41,1,1,null,"GO:0051247","positive regulation of protein metabolic process",77,16,15.25,1,1]
["GO:0034249","negative regulation of amide metabolic process",75,5,8.9,1,1,null,"GO:0034248","regulation of amide metabolic process",115,12,21.34,1,1,null,"GO:0160062","cutin-based cuticle development",18,3,3.05,1,1,null,"GO:0040011","locomotion",29,7,5.74,1,1]
["GO:0006753","nucleoside phosphate metabolic process",294,38,34.9,1,1,null,"GO:0048285","organelle fission",176,20,32.66,1,1,null,"GO:0032104","regulation of response to extracellular stimulus",12,2,2.03,1,1,null,"GO:0009605","response to external stimulus",1913,465,378.85,1,1]
["GO:0140013","meiotic nuclear division",110,10,13.06,1,1,null,"GO:0034249","negative regulation of amide metabolic process",73,7,13.55,1,1,null,"GO:0031122","cytoplasmic microtubule organization",52,6,8.81,1,1,null,"GO:0009607","response to biotic stimulus",1591,378,315.08,1,1]
["GO:0001763","morphogenesis of a branching structure",22,4,2.61,1,1,null,"GO:0140013","meiotic nuclear division",83,5,15.4,1,1,null,"GO:0031125","rRNA 3'-end processing",14,1,2.37,1,1,null,"GO:0045184","establishment of protein localization",513,121,101.59,1,1]
["GO:0006754","ATP biosynthetic process",29,4,3.44,1,1,null,"GO:0006754","ATP biosynthetic process",28,2,5.2,1,1,null,"GO:0034204","lipid translocation",13,2,2.2,1,1,null,"GO:0043162","ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway",17,6,3.37,1,1]
["GO:0006757","ATP generation from ADP",47,3,5.58,1,1,null,"GO:0140014","mitotic nuclear division",59,3,10.95,1,1,null,"GO:0106354","tRNA surveillance",10,1,1.7,1,1,null,"GO:0045185","maintenance of protein location",23,6,4.55,1,1]
["GO:0045229","external encapsulating structure organization",253,51,30.03,1,1,null,"GO:0006757","ATP generation from ADP",39,6,7.24,1,1,null,"GO:0030071","regulation of mitotic metaphase/anaphase transition",17,1,2.88,1,1,null,"GO:1900673","olefin metabolic process",20,4,3.96,1,1]
["GO:0006029","proteoglycan metabolic process",13,1,1.54,1,1,null,"GO:0048278","vesicle docking",28,2,5.2,1,1,null,"GO:0043162","ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway",17,5,2.88,1,1,null,"GO:1900674","olefin biosynthetic process",20,4,3.96,1,1]
["GO:0043288","apocarotenoid metabolic process",39,3,4.63,1,1,null,"GO:0045229","external encapsulating structure organization",202,32,37.49,1,1,null,"GO:0030832","regulation of actin filament length",17,2,2.88,1,1,null,"GO:0051235","maintenance of location",60,13,11.88,1,1]
["GO:0043289","apocarotenoid biosynthetic process",24,2,2.85,1,1,null,"GO:0006029","proteoglycan metabolic process",12,2,2.23,1,1,null,"GO:0030833","regulation of actin filament polymerization",13,2,2.2,1,1,null,"GO:0051236","establishment of RNA localization",52,16,10.3,1,1]
["GO:0046460","neutral lipid biosynthetic process",19,1,2.26,1,1,null,"GO:0043288","apocarotenoid metabolic process",33,6,6.12,1,1,null,"GO:0035303","regulation of dephosphorylation",30,6,5.09,1,1,null,"GO:1901293","nucleoside phosphate biosynthetic process",145,31,28.72,1,1]
["GO:0046463","acylglycerol biosynthetic process",19,1,2.26,1,1,null,"GO:0043289","apocarotenoid biosynthetic process",23,6,4.27,1,1,null,"GO:0006275","regulation of DNA replication",44,3,7.46,1,1,null,"GO:0015980","energy derivation by oxidation of organic compounds",134,35,26.54,1,1]
["GO:0046467","membrane lipid biosynthetic process",85,1,10.09,1,1,null,"GO:0006783","heme biosynthetic process",21,2,3.9,1,1,null,"GO:1901987","regulation of cell cycle phase transition",68,5,11.53,1,1,null,"GO:1902644","tertiary alcohol metabolic process",33,8,6.54,1,1]
["GO:0009161","ribonucleoside monophosphate metabolic process",39,12,4.63,1,1,null,"GO:0046460","neutral lipid biosynthetic process",16,2,2.97,1,1,null,"GO:1901988","negative regulation of cell cycle phase transition",41,2,6.95,1,1,null,"GO:0140962","multicellular organismal-level chemical homeostasis",19,5,3.76,1,1]
["GO:0051701","biological process involved in interaction with host",17,2,2.02,1,1,null,"GO:0046463","acylglycerol biosynthetic process",16,2,2.97,1,1,null,"GO:0042401","biogenic amine biosynthetic process",36,6,6.1,1,1,null,"GO:1902645","tertiary alcohol biosynthetic process",23,5,4.55,1,1]
["GO:0006771","riboflavin metabolic process",11,1,1.31,1,1,null,"GO:0009161","ribonucleoside monophosphate metabolic process",36,3,6.68,1,1,null,"GO:0042402","cellular biogenic amine catabolic process",10,3,1.7,1,1,null,"GO:0007602","phototransduction",18,7,3.56,1,1]
["GO:0009167","purine ribonucleoside monophosphate metabolic process",22,7,2.61,1,1,null,"GO:0006771","riboflavin metabolic process",11,1,2.04,1,1,null,"GO:1900864","mitochondrial RNA modification",33,1,5.59,1,1,null,"GO:0018958","phenol-containing compound metabolic process",39,7,7.72,1,1]
["GO:0006775","fat-soluble vitamin metabolic process",24,1,2.85,1,1,null,"GO:0009167","purine ribonucleoside monophosphate metabolic process",20,1,3.71,1,1,null,"GO:0043155","negative regulation of photosynthesis, light reaction",11,7,1.86,1,1,null,"GO:0015977","carbon fixation",15,5,2.97,1,1]
["GO:0016180","snRNA processing",16,1,1.9,1,1,null,"GO:0009168","purine ribonucleoside monophosphate biosynthetic process",20,1,3.71,1,1,null,"GO:0006220","pyrimidine nucleotide metabolic process",32,2,5.42,1,1,null,"GO:1900618","regulation of shoot system morphogenesis",11,3,2.18,1,1]
["GO:0046451","diaminopimelate metabolic process",14,3,1.66,1,1,null,"GO:0006775","fat-soluble vitamin metabolic process",21,3,3.9,1,1,null,"GO:0006221","pyrimidine nucleotide biosynthetic process",32,2,5.42,1,1,null,"GO:0000305","response to oxygen radical",12,1,2.38,1,1]
["GO:0006040","amino sugar metabolic process",28,2,3.32,1,1,null,"GO:0046451","diaminopimelate metabolic process",13,2,2.41,1,1,null,"GO:0030029","actin filament-based process",102,10,17.29,1,1,null,"GO:0018210","peptidyl-threonine modification",12,4,2.38,1,1]
["GO:0019693","ribose phosphate metabolic process",212,29,25.17,1,1,null,"GO:0008535","respiratory chain complex IV assembly",10,4,1.86,1,1,null,"GO:1902903","regulation of supramolecular fiber organization",30,2,5.09,1,1,null,"GO:1901990","regulation of mitotic cell cycle phase transition",32,6,6.34,1,1]
["GO:0140718","facultative heterochromatin formation",14,2,1.66,1,1,null,"GO:0006779","porphyrin-containing compound biosynthetic process",86,14,15.96,1,1,null,"GO:1902904","negative regulation of supramolecular fiber organization",14,2,2.37,1,1,null,"GO:1905818","regulation of chromosome separation",10,1,1.98,1,1]
["GO:0009156","ribonucleoside monophosphate biosynthetic process",38,11,4.51,1,1,null,"GO:0019362","pyridine nucleotide metabolic process",53,12,9.84,1,1,null,"GO:0002097","tRNA wobble base modification",18,1,3.05,1,1,null,"GO:0006275","regulation of DNA replication",28,7,5.55,1,1]
["GO:0019362","pyridine nucleotide metabolic process",57,5,6.77,1,1,null,"GO:0032446","protein modification by small protein conjugation",11,2,2.04,1,1,null,"GO:0061013","regulation of mRNA catabolic process",63,10,10.68,1,1,null,"GO:0046351","disaccharide biosynthetic process",23,7,4.55,1,1]
["GO:0006725","cellular aromatic compound metabolic process",5925,814,703.34,1,1,null,"GO:0046483","heterocycle metabolic process",5023,750,932.21,1,1,null,"GO:0061014","positive regulation of mRNA catabolic process",53,10,8.98,1,1,null,"GO:0045144","meiotic sister chromatid segregation",11,6,2.18,1,1]
["GO:0019363","pyridine nucleotide biosynthetic process",14,1,1.66,1,1,null,"GO:0046486","glycerolipid metabolic process",144,22,26.72,1,1,null,"GO:0070647","protein modification by small protein conjugation or removal",104,14,17.63,1,1,null,"GO:0071824","protein-DNA complex subunit organization",65,13,12.87,1,1]
["GO:0045927","positive regulation of growth",38,6,4.51,1,1,null,"GO:0065001","specification of axis polarity",23,2,4.27,1,1,null,"GO:0030041","actin filament polymerization",19,2,3.22,1,1,null,"GO:1903825","organic acid transmembrane transport",46,12,9.11,1,1]
["GO:0061157","mRNA destabilization",50,2,5.94,1,1,null,"GO:0046488","phosphatidylinositol metabolic process",67,7,12.43,1,1,null,"GO:0010393","galacturonan metabolic process",110,5,18.65,1,1,null,"GO:0006220","pyrimidine nucleotide metabolic process",29,4,5.74,1,1]
["GO:0032446","protein modification by small protein conjugation",15,1,1.78,1,1,null,"GO:0099518","vesicle cytoskeletal trafficking",13,1,2.41,1,1,null,"GO:0003013","circulatory system process",20,3,3.39,1,1,null,"GO:0006221","pyrimidine nucleotide biosynthetic process",29,4,5.74,1,1]
["GO:0046486","glycerolipid metabolic process",159,9,18.87,1,1,null,"GO:0065007","biological regulation",5517,918,1023.89,1,1,null,"GO:0046365","monosaccharide catabolic process",12,3,2.03,1,1,null,"GO:0070297","regulation of phosphorelay signal transduction system",23,8,4.55,1,1]
["GO:0065001","specification of axis polarity",27,6,3.21,1,1,null,"GO:0090567","reproductive shoot system development",479,68,88.9,1,1,null,"GO:0003018","vascular process in circulatory system",20,3,3.39,1,1,null,"GO:0015914","phospholipid transport",18,3,3.56,1,1]
["GO:0097577","sequestering of iron ion",10,3,1.19,1,1,null,"GO:0065009","regulation of molecular function",159,33,29.51,1,1,null,"GO:0043933","protein-containing complex organization",594,86,100.69,1,1,null,"GO:0070298","negative regulation of phosphorelay signal transduction system",15,4,2.97,1,1]
["GO:0065007","biological regulation",6510,660,772.78,1,1,null,"GO:0006714","sesquiterpenoid metabolic process",37,7,6.87,1,1,null,"GO:0043934","sporulation",32,7,5.42,1,1,null,"GO:0061458","reproductive system development",1734,404,343.4,1,1]
["GO:0006714","sesquiterpenoid metabolic process",45,3,5.34,1,1,null,"GO:0032434","regulation of proteasomal ubiquitin-dependent protein catabolic process",22,4,4.08,1,1,null,"GO:0033238","regulation of amine metabolic process",15,3,2.54,1,1,null,"GO:0018231","peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine",17,4,3.37,1,1]
["GO:0046470","phosphatidylcholine metabolic process",21,1,2.49,1,1,null,"GO:0016128","phytosteroid metabolic process",14,2,2.6,1,1,null,"GO:0110096","cellular response to aldehyde",10,2,1.7,1,1,null,"GO:0006986","response to unfolded protein",31,3,6.14,1,1]
["GO:0032434","regulation of proteasomal ubiquitin-dependent protein catabolic process",23,3,2.73,1,1,null,"GO:0048236","plant-type sporogenesis",23,3,4.27,1,1,null,"GO:1902100","negative regulation of metaphase/anaphase transition of cell cycle",10,1,1.7,1,1,null,"GO:0036294","cellular response to decreased oxygen levels",168,49,33.27,1,1]
["GO:0046471","phosphatidylglycerol metabolic process",12,2,1.42,1,1,null,"GO:0009173","pyrimidine ribonucleoside monophosphate metabolic process",12,1,2.23,1,1,null,"GO:0090501","RNA phosphodiester bond hydrolysis",46,5,7.8,1,1,null,"GO:0071840","cellular component organization or biogenesis",2754,556,545.4,1,1]
["GO:0046474","glycerophospholipid biosynthetic process",96,4,11.4,1,1,null,"GO:0016129","phytosteroid biosynthetic process",12,2,2.23,1,1,null,"GO:0031109","microtubule polymerization or depolymerization",33,4,5.59,1,1,null,"GO:0033865","nucleoside bisphosphate metabolic process",54,10,10.69,1,1]
["GO:0016128","phytosteroid metabolic process",17,2,2.02,1,1,null,"GO:0009174","pyrimidine ribonucleoside monophosphate biosynthetic process",11,1,2.04,1,1,null,"GO:0090503","RNA phosphodiester bond hydrolysis, exonucleolytic",11,1,1.86,1,1,null,"GO:0033866","nucleoside bisphosphate biosynthetic process",34,6,6.73,1,1]
["GO:0048236","plant-type sporogenesis",32,2,3.8,1,1,null,"GO:0006740","NADPH regeneration",28,7,5.2,1,1,null,"GO:0048466","androecium development",73,12,12.37,1,1,null,"GO:0015936","coenzyme A metabolic process",15,2,2.97,1,1]
["GO:0016129","phytosteroid biosynthetic process",13,1,1.54,1,1,null,"GO:0007154","cell communication",1768,312,328.12,1,1,null,"GO:0048469","cell maturation",123,18,20.85,1,1,null,"GO:0034293","sexual sporulation",23,5,4.55,1,1]
["GO:0009174","pyrimidine ribonucleoside monophosphate biosynthetic process",12,4,1.42,1,1,null,"GO:0006743","ubiquinone metabolic process",18,7,3.34,1,1,null,"GO:2001020","regulation of response to DNA damage stimulus",26,2,4.41,1,1,null,"GO:0018209","peptidyl-serine modification",80,18,15.84,1,1]
["GO:0006740","NADPH regeneration",32,3,3.8,1,1,null,"GO:0009179","purine ribonucleoside diphosphate metabolic process",40,6,7.42,1,1,null,"GO:0032271","regulation of protein polymerization",19,2,3.22,1,1,null,"GO:1901987","regulation of cell cycle phase transition",46,8,9.11,1,1]
["GO:0009179","purine ribonucleoside diphosphate metabolic process",49,3,5.82,1,1,null,"GO:0070085","glycosylation",121,19,22.46,1,1,null,"GO:0032272","negative regulation of protein polymerization",12,2,2.03,1,1,null,"GO:1901988","negative regulation of cell cycle phase transition",26,4,5.15,1,1]
["GO:1904029","regulation of cyclin-dependent protein kinase activity",42,5,4.99,1,1,null,"GO:1904029","regulation of cyclin-dependent protein kinase activity",19,1,3.53,1,1,null,"GO:0051667","establishment of plastid localization",17,6,2.88,1,1,null,"GO:0046341","CDP-diacylglycerol metabolic process",13,1,2.57,1,1]
["GO:0010393","galacturonan metabolic process",110,27,13.06,1,1,null,"GO:0010393","galacturonan metabolic process",93,17,17.26,1,1,null,"GO:0042168","heme metabolic process",25,3,4.24,1,1,null,"GO:0051084","de novo' post-translational protein folding",41,4,8.12,1,1]
["GO:0016116","carotenoid metabolic process",36,3,4.27,1,1,null,"GO:0045930","negative regulation of mitotic cell cycle",21,2,3.9,1,1,null,"GO:0051650","establishment of vesicle localization",29,2,4.92,1,1,null,"GO:0033875","ribonucleoside bisphosphate metabolic process",54,10,10.69,1,1]
["GO:0045930","negative regulation of mitotic cell cycle",32,5,3.8,1,1,null,"GO:0009123","nucleoside monophosphate metabolic process",40,4,7.42,1,1,null,"GO:0051656","establishment of organelle localization",72,9,12.21,1,1,null,"GO:0030641","regulation of cellular pH",26,9,5.15,1,1]
["GO:0009123","nucleoside monophosphate metabolic process",44,15,5.22,1,1,null,"GO:0006730","one-carbon metabolic process",18,3,3.34,1,1,null,"GO:0035459","vesicle cargo loading",12,3,2.03,1,1,null,"GO:0000459","exonucleolytic trimming involved in rRNA processing",11,3,2.18,1,1]
["GO:0009124","nucleoside monophosphate biosynthetic process",43,14,5.1,1,1,null,"GO:0009126","purine nucleoside monophosphate metabolic process",20,1,3.71,1,1,null,"GO:0110053","regulation of actin filament organization",22,2,3.73,1,1,null,"GO:0006935","chemotaxis",29,7,5.74,1,1]
["GO:0009126","purine nucleoside monophosphate metabolic process",22,7,2.61,1,1,null,"GO:0045934","negative regulation of nucleobase-containing compound metabolic process",188,39,34.89,1,1,null,"GO:0010384","cell wall proteoglycan metabolic process",12,1,2.03,1,1,null,"GO:0046337","phosphatidylethanolamine metabolic process",10,3,1.98,1,1]
["GO:0045934","negative regulation of nucleobase-containing compound metabolic process",222,23,26.35,1,1,null,"GO:0009127","purine nucleoside monophosphate biosynthetic process",20,1,3.71,1,1,null,"GO:0090696","post-embryonic plant organ development",159,26,26.95,1,1,null,"GO:0071806","protein transmembrane transport",92,17,18.22,1,1]
["GO:0009127","purine nucleoside monophosphate biosynthetic process",22,7,2.61,1,1,null,"GO:0045935","positive regulation of nucleobase-containing compound metabolic process",396,63,73.49,1,1,null,"GO:0055086","nucleobase-containing small molecule metabolic process",372,66,63.06,1,1,null,"GO:0046618","xenobiotic export from cell",24,10,4.75,1,1]
["GO:0045935","positive regulation of nucleobase-containing compound metabolic process",462,32,54.84,1,1,null,"GO:0009129","pyrimidine nucleoside monophosphate metabolic process",15,1,2.78,1,1,null,"GO:0090697","post-embryonic plant organ morphogenesis",100,14,16.95,1,1,null,"GO:0006206","pyrimidine nucleobase metabolic process",16,3,3.17,1,1]
["GO:0009129","pyrimidine nucleoside monophosphate metabolic process",17,8,2.02,1,1,null,"GO:0045937","positive regulation of phosphate metabolic process",13,1,2.41,1,1,null,"GO:0042157","lipoprotein metabolic process",103,14,17.46,1,1,null,"GO:0051028","mRNA transport",35,13,6.93,1,1]
["GO:0045937","positive regulation of phosphate metabolic process",16,2,1.9,1,1,null,"GO:0019374","galactolipid metabolic process",14,3,2.6,1,1,null,"GO:0003008","system process",20,3,3.39,1,1,null,"GO:0051783","regulation of nuclear division",24,3,4.75,1,1]
["GO:0016143","S-glycoside metabolic process",211,48,25.05,1,1,null,"GO:0016143","S-glycoside metabolic process",132,34,24.5,1,1,null,"GO:0042158","lipoprotein biosynthetic process",101,14,17.12,1,1,null,"GO:0000478","endonucleolytic cleavage involved in rRNA processing",12,5,2.38,1,1]
["GO:0006739","NADP metabolic process",43,3,5.1,1,1,null,"GO:0006739","NADP metabolic process",39,7,7.24,1,1,null,"GO:0002831","regulation of response to biotic stimulus",191,35,32.38,1,1,null,"GO:0070988","demethylation",42,7,8.32,1,1]
["GO:0016144","S-glycoside biosynthetic process",86,25,10.21,1,1,null,"GO:0016144","S-glycoside biosynthetic process",50,14,9.28,1,1,null,"GO:0044260","cellular macromolecule metabolic process",2189,236,371.07,1,1,null,"GO:0010562","positive regulation of phosphorus metabolic process",13,5,2.57,1,1]
["GO:0016145","S-glycoside catabolic process",15,3,1.78,1,1,null,"GO:0016145","S-glycoside catabolic process",10,2,1.86,1,1,null,"GO:0055071","manganese ion homeostasis",17,3,2.88,1,1,null,"GO:0010563","negative regulation of phosphorus metabolic process",13,2,2.57,1,1]
["GO:0009110","vitamin biosynthetic process",78,4,9.26,1,1,null,"GO:0009110","vitamin biosynthetic process",71,12,13.18,1,1,null,"GO:0055072","iron ion homeostasis",41,7,6.95,1,1,null,"GO:0070972","protein localization to endoplasmic reticulum",47,6,9.31,1,1]
["GO:0009112","nucleobase metabolic process",35,7,4.15,1,1,null,"GO:0009112","nucleobase metabolic process",31,6,5.75,1,1,null,"GO:0055074","calcium ion homeostasis",49,10,8.31,1,1,null,"GO:0034285","response to disaccharide",56,15,11.09,1,1]
["GO:0031056","regulation of histone modification",47,3,5.58,1,1,null,"GO:0042593","glucose homeostasis",19,1,3.53,1,1,null,"GO:0044264","cellular polysaccharide metabolic process",260,43,44.07,1,1,null,"GO:0009403","toxin biosynthetic process",12,6,2.38,1,1]
["GO:0009117","nucleotide metabolic process",282,38,33.48,1,1,null,"GO:1905393","plant organ formation",89,14,16.52,1,1,null,"GO:0044265","cellular macromolecule catabolic process",562,112,95.27,1,1,null,"GO:0009404","toxin metabolic process",35,11,6.93,1,1]
["GO:0035510","DNA dealkylation",27,1,3.21,1,1,null,"GO:0009119","ribonucleoside metabolic process",14,1,2.6,1,1,null,"GO:0043102","amino acid salvage",10,2,1.7,1,1,null,"GO:0140053","mitochondrial gene expression",65,7,12.87,1,1]
["GO:0120252","hydrocarbon metabolic process",55,7,6.53,1,1,null,"GO:0016131","brassinosteroid metabolic process",14,2,2.6,1,1,null,"GO:0046337","phosphatidylethanolamine metabolic process",12,4,2.03,1,1,null,"GO:0140056","organelle localization by membrane tethering",39,11,7.72,1,1]
["GO:0009141","nucleoside triphosphate metabolic process",110,13,13.06,1,1,null,"GO:0019682","glyceraldehyde-3-phosphate metabolic process",13,1,2.41,1,1,null,"GO:0140962","multicellular organismal-level chemical homeostasis",26,3,4.41,1,1,null,"GO:0070925","organelle assembly",146,19,28.91,1,1]
["GO:0019685","photosynthesis, dark reaction",17,1,2.02,1,1,null,"GO:0120251","hydrocarbon biosynthetic process",37,12,6.87,1,1,null,"GO:0009403","toxin biosynthetic process",17,4,2.88,1,1,null,"GO:0006066","alcohol metabolic process",118,29,23.37,1,1]
["GO:0120255","olefinic compound biosynthetic process",53,7,6.29,1,1,null,"GO:0120252","hydrocarbon metabolic process",49,16,9.09,1,1,null,"GO:0009404","toxin metabolic process",46,11,7.8,1,1,null,"GO:0051716","cellular response to stimulus",2742,646,543.02,1,1]
["GO:0009144","purine nucleoside triphosphate metabolic process",93,9,11.04,1,1,null,"GO:0009141","nucleoside triphosphate metabolic process",98,9,18.19,1,1,null,"GO:0048440","carpel development",61,6,10.34,1,1,null,"GO:0034220","monoatomic ion transmembrane transport",135,30,26.74,1,1]
["GO:0009145","purine nucleoside triphosphate biosynthetic process",38,6,4.51,1,1,null,"GO:0009142","nucleoside triphosphate biosynthetic process",49,3,9.09,1,1,null,"GO:0050918","positive chemotaxis",26,9,4.41,1,1,null,"GO:0015780","nucleotide-sugar transmembrane transport",21,4,4.16,1,1]
["GO:0009148","pyrimidine nucleoside triphosphate biosynthetic process",18,4,2.14,1,1,null,"GO:0019685","photosynthesis, dark reaction",16,3,2.97,1,1,null,"GO:0048444","floral organ morphogenesis",35,1,5.93,1,1,null,"GO:0046490","isopentenyl diphosphate metabolic process",19,7,3.76,1,1]
["GO:0043934","sporulation",32,2,3.8,1,1,null,"GO:0034050","programmed cell death induced by symbiont",59,7,10.95,1,1,null,"GO:0042126","nitrate metabolic process",13,8,2.2,1,1,null,"GO:0046496","nicotinamide nucleotide metabolic process",52,17,10.3,1,1]
["GO:0007127","meiosis I",71,8,8.43,1,1,null,"GO:0120255","olefinic compound biosynthetic process",47,14,8.72,1,1,null,"GO:0010346","shoot axis formation",19,1,3.22,1,1,null,"GO:0034219","carbohydrate transmembrane transport",16,3,3.17,1,1]
["GO:0019319","hexose biosynthetic process",26,2,3.09,1,1,null,"GO:0009144","purine nucleoside triphosphate metabolic process",83,8,15.4,1,1,null,"GO:0048438","floral whorl development",157,19,26.61,1,1,null,"GO:0006760","folic acid-containing compound metabolic process",31,7,6.14,1,1]
["GO:0009132","nucleoside diphosphate metabolic process",61,5,7.24,1,1,null,"GO:0009145","purine nucleoside triphosphate biosynthetic process",36,2,6.68,1,1,null,"GO:0051640","organelle localization",128,22,21.7,1,1,null,"GO:0009199","ribonucleoside triphosphate metabolic process",90,30,17.82,1,1]
["GO:1903506","regulation of nucleic acid-templated transcription",1740,185,206.55,1,1,null,"GO:0009147","pyrimidine nucleoside triphosphate metabolic process",17,1,3.16,1,1,null,"GO:0051643","endoplasmic reticulum localization",10,3,1.7,1,1,null,"GO:0022900","electron transport chain",94,16,18.62,1,1]
["GO:0044419","biological process involved in interspecies interaction between organisms",2001,186,237.53,1,1,null,"GO:0009148","pyrimidine nucleoside triphosphate biosynthetic process",16,1,2.97,1,1,null,"GO:0051644","plastid localization",23,7,3.9,1,1,null,"GO:0035592","establishment of protein localization to extracellular region",21,6,4.16,1,1]
["GO:0043207","response to external biotic stimulus",1988,183,235.99,1,1,null,"GO:0043934","sporulation",23,3,4.27,1,1,null,"GO:0051648","vesicle localization",29,2,4.92,1,1,null,"GO:0022904","respiratory electron transport chain",52,12,10.3,1,1]
["GO:0009135","purine nucleoside diphosphate metabolic process",49,3,5.82,1,1,null,"GO:0000154","rRNA modification",36,3,6.68,1,1,null,"GO:0061572","actin filament bundle organization",17,7,2.88,1,1,null,"GO:0006073","cellular glucan metabolic process",158,37,31.29,1,1]
["GO:1903507","negative regulation of nucleic acid-templated transcription",174,16,20.66,1,1,null,"GO:0007127","meiosis I",54,3,10.02,1,1,null,"GO:0033750","ribosome localization",14,1,2.37,1,1,null,"GO:0070201","regulation of establishment of protein localization",15,2,2.97,1,1]
["GO:1903508","positive regulation of nucleic acid-templated transcription",332,28,39.41,1,1,null,"GO:0046434","organophosphate catabolic process",35,8,6.5,1,1,null,"GO:0032200","telomere organization",31,1,5.25,1,1,null,"GO:0034248","regulation of amide metabolic process",115,24,22.77,1,1]
["GO:0019344","cysteine biosynthetic process",18,4,2.14,1,1,null,"GO:0019319","hexose biosynthetic process",22,3,4.08,1,1,null,"GO:0023051","regulation of signaling",396,101,67.13,1,1,null,"GO:0034249","negative regulation of amide metabolic process",73,17,14.46,1,1]
["GO:0061136","regulation of proteasomal protein catabolic process",30,3,3.56,1,1,null,"GO:0009130","pyrimidine nucleoside monophosphate biosynthetic process",14,1,2.6,1,1,null,"GO:0030522","intracellular receptor signaling pathway",19,7,3.22,1,1,null,"GO:0006753","nucleoside phosphate metabolic process",269,70,53.27,1,1]
["GO:0098727","maintenance of cell number",83,12,9.85,1,1,null,"GO:0009132","nucleoside diphosphate metabolic process",50,7,9.28,1,1,null,"GO:0023056","positive regulation of signaling",83,23,14.07,1,1,null,"GO:0006754","ATP biosynthetic process",28,9,5.55,1,1]
["GO:0031023","microtubule organizing center organization",12,1,1.42,1,1,null,"GO:0044419","biological process involved in interspecies interaction between organisms",1601,325,297.13,1,1,null,"GO:0035437","maintenance of protein localization in endoplasmic reticulum",11,1,1.86,1,1,null,"GO:0006757","ATP generation from ADP",39,15,7.72,1,1]
["GO:1901000","regulation of response to salt stress",36,5,4.27,1,1,null,"GO:0043207","response to external biotic stimulus",1590,324,295.09,1,1,null,"GO:0023057","negative regulation of signaling",102,23,17.29,1,1,null,"GO:0099587","inorganic ion import across plasma membrane",17,4,3.37,1,1]
["GO:0070726","cell wall assembly",13,1,1.54,1,1,null,"GO:0009135","purine nucleoside diphosphate metabolic process",40,6,7.42,1,1,null,"GO:0009199","ribonucleoside triphosphate metabolic process",101,27,17.12,1,1,null,"GO:0043288","apocarotenoid metabolic process",33,8,6.54,1,1]
["GO:0016101","diterpenoid metabolic process",37,7,4.39,1,1,null,"GO:1903508","positive regulation of nucleic acid-templated transcription",278,49,51.59,1,1,null,"GO:0009955","adaxial/abaxial pattern specification",42,2,7.12,1,1,null,"GO:0043289","apocarotenoid biosynthetic process",23,5,4.55,1,1]
["GO:0010384","cell wall proteoglycan metabolic process",12,1,1.42,1,1,null,"GO:1903509","liposaccharide metabolic process",51,9,9.47,1,1,null,"GO:0000375","RNA splicing, via transesterification reactions",238,41,40.34,1,1,null,"GO:0046460","neutral lipid biosynthetic process",16,5,3.17,1,1]
["GO:0016106","sesquiterpenoid biosynthetic process",28,2,3.32,1,1,null,"GO:0019344","cysteine biosynthetic process",15,3,2.78,1,1,null,"GO:0000377","RNA splicing, via transesterification reactions with bulged adenosine as nucleophile",238,41,40.34,1,1,null,"GO:0046467","membrane lipid biosynthetic process",82,10,16.24,1,1]
["GO:0016108","tetraterpenoid metabolic process",36,3,4.27,1,1,null,"GO:0098727","maintenance of cell number",58,6,10.76,1,1,null,"GO:0006753","nucleoside phosphate metabolic process",294,56,49.84,1,1,null,"GO:0009161","ribonucleoside monophosphate metabolic process",36,8,7.13,1,1]
["GO:0016109","tetraterpenoid biosynthetic process",27,3,3.21,1,1,null,"GO:0070726","cell wall assembly",13,2,2.41,1,1,null,"GO:0006754","ATP biosynthetic process",29,9,4.92,1,1,null,"GO:0051702","biological process involved in interaction with symbiont",61,11,12.08,1,1]
["GO:0007135","meiosis II",21,1,2.49,1,1,null,"GO:0016101","diterpenoid metabolic process",26,8,4.83,1,1,null,"GO:0006757","ATP generation from ADP",47,13,7.97,1,1,null,"GO:0006771","riboflavin metabolic process",11,3,2.18,1,1]
["GO:0043903","regulation of biological process involved in symbiotic interaction",29,2,3.44,1,1,null,"GO:0010384","cell wall proteoglycan metabolic process",11,2,2.04,1,1,null,"GO:1902221","erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process",18,5,3.05,1,1,null,"GO:0009167","purine ribonucleoside monophosphate metabolic process",20,6,3.96,1,1]
["GO:0042558","pteridine-containing compound metabolic process",36,8,4.27,1,1,null,"GO:0016108","tetraterpenoid metabolic process",36,8,6.68,1,1,null,"GO:1901292","nucleoside phosphate catabolic process",17,1,2.88,1,1,null,"GO:0006775","fat-soluble vitamin metabolic process",21,1,4.16,1,1]
["GO:0042559","pteridine-containing compound biosynthetic process",17,3,2.02,1,1,null,"GO:0016109","tetraterpenoid biosynthetic process",26,5,4.83,1,1,null,"GO:1901293","nucleoside phosphate biosynthetic process",155,21,26.27,1,1,null,"GO:0016180","snRNA processing",16,1,3.17,1,1]
["GO:0010375","stomatal complex patterning",21,2,2.49,1,1,null,"GO:0042558","pteridine-containing compound metabolic process",33,7,6.12,1,1,null,"GO:1902223","erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process",11,3,1.86,1,1,null,"GO:0046451","diaminopimelate metabolic process",13,2,2.57,1,1]
["GO:0009101","glycoprotein biosynthetic process",129,10,15.31,1,1,null,"GO:0009100","glycoprotein metabolic process",127,20,23.57,1,1,null,"GO:0090626","plant epidermis morphogenesis",98,11,16.61,1,1,null,"GO:0008535","respiratory chain complex IV assembly",10,1,1.98,1,1]
["GO:0071692","protein localization to extracellular region",21,1,2.49,1,1,null,"GO:0009101","glycoprotein biosynthetic process",116,19,21.53,1,1,null,"GO:0009987","cellular process",13573,2333,2300.83,1,1,null,"GO:0009150","purine ribonucleotide metabolic process",161,43,31.88,1,1]
["GO:0043062","extracellular structure organization",12,1,1.42,1,1,null,"GO:0015865","purine nucleotide transport",17,2,3.16,1,1,null,"GO:0015766","disaccharide transport",14,3,2.37,1,1,null,"GO:0019693","ribose phosphate metabolic process",192,49,38.02,1,1]
["GO:0008652","amino acid biosynthetic process",173,34,20.54,1,1,null,"GO:0071692","protein localization to extracellular region",21,1,3.9,1,1,null,"GO:0046490","isopentenyl diphosphate metabolic process",21,5,3.56,1,1,null,"GO:0140718","facultative heterochromatin formation",13,4,2.57,1,1]
["GO:0045089","positive regulation of innate immune response",57,6,6.77,1,1,null,"GO:0015868","purine ribonucleotide transport",14,1,2.6,1,1,null,"GO:0046496","nicotinamide nucleotide metabolic process",56,15,9.49,1,1,null,"GO:0019362","pyridine nucleotide metabolic process",53,17,10.5,1,1]
["GO:0030198","extracellular matrix organization",12,1,1.42,1,1,null,"GO:0006892","post-Golgi vesicle-mediated transport",36,4,6.68,1,1,null,"GO:0044237","cellular metabolic process",10163,1729,1722.78,1,1,null,"GO:0006725","cellular aromatic compound metabolic process",5162,1111,1022.27,1,1]
["GO:0019637","organophosphate metabolic process",531,55,63.03,1,1,null,"GO:0031047","RNA-mediated gene silencing",102,12,18.93,1,1,null,"GO:0044238","primary metabolic process",9718,1553,1647.35,1,1,null,"GO:0019363","pyridine nucleotide biosynthetic process",14,3,2.77,1,1]
["GO:0044403","biological process involved in symbiotic interaction",91,7,10.8,1,1,null,"GO:0043062","extracellular structure organization",14,4,2.6,1,1,null,"GO:0006771","riboflavin metabolic process",11,1,1.86,1,1,null,"GO:0032446","protein modification by small protein conjugation",11,3,2.18,1,1]
["GO:0090501","RNA phosphodiester bond hydrolysis",46,6,5.46,1,1,null,"GO:0098732","macromolecule deacylation",11,3,2.04,1,1,null,"GO:0009161","ribonucleoside monophosphate metabolic process",39,1,6.61,1,1,null,"GO:0046483","heterocycle metabolic process",5023,1087,994.74,1,1]
["GO:0034728","nucleosome organization",29,6,3.44,1,1,null,"GO:0045088","regulation of innate immune response",80,12,14.85,1,1,null,"GO:0043269","regulation of monoatomic ion transport",27,7,4.58,1,1,null,"GO:0034204","lipid translocation",13,3,2.57,1,1]
["GO:0048764","trichoblast maturation",123,15,14.6,1,1,null,"GO:0015851","nucleobase transport",14,2,2.6,1,1,null,"GO:0006775","fat-soluble vitamin metabolic process",24,8,4.07,1,1,null,"GO:0046486","glycerolipid metabolic process",144,32,28.52,1,1]
["GO:0090503","RNA phosphodiester bond hydrolysis, exonucleolytic",11,1,1.31,1,1,null,"GO:0071368","cellular response to cytokinin stimulus",48,8,8.91,1,1,null,"GO:0009165","nucleotide biosynthetic process",153,20,25.94,1,1,null,"GO:0065007","biological regulation",5517,1275,1092.58,1,1]
["GO:0034030","ribonucleoside bisphosphate biosynthetic process",37,4,4.39,1,1,null,"GO:0019637","organophosphate metabolic process",485,71,90.01,1,1,null,"GO:0009167","purine ribonucleoside monophosphate metabolic process",22,1,3.73,1,1,null,"GO:0065009","regulation of molecular function",159,23,31.49,1,1]
["GO:0034032","purine nucleoside bisphosphate metabolic process",60,5,7.12,1,1,null,"GO:0044403","biological process involved in symbiotic interaction",75,10,13.92,1,1,null,"GO:0009168","purine ribonucleoside monophosphate biosynthetic process",22,1,3.73,1,1,null,"GO:0006714","sesquiterpenoid metabolic process",37,8,7.33,1,1]
["GO:0034033","purine nucleoside bisphosphate biosynthetic process",37,4,4.39,1,1,null,"GO:0090501","RNA phosphodiester bond hydrolysis",46,2,8.54,1,1,null,"GO:0006779","porphyrin-containing compound biosynthetic process",106,21,17.97,1,1,null,"GO:0046471","phosphatidylglycerol metabolic process",11,3,2.18,1,1]
["GO:0071383","cellular response to steroid hormone stimulus",64,16,7.6,1,1,null,"GO:0034728","nucleosome organization",28,11,5.2,1,1,null,"GO:0097237","cellular response to toxic substance",41,7,6.95,1,1,null,"GO:0016128","phytosteroid metabolic process",14,7,2.77,1,1]
["GO:0043087","regulation of GTPase activity",38,1,4.51,1,1,null,"GO:0090502","RNA phosphodiester bond hydrolysis, endonucleolytic",18,1,3.34,1,1,null,"GO:0009152","purine ribonucleotide biosynthetic process",97,15,16.44,1,1,null,"GO:0043244","regulation of protein-containing complex disassembly",15,4,2.97,1,1]
["GO:0010346","shoot axis formation",19,4,2.26,1,1,null,"GO:0048764","trichoblast maturation",96,14,17.82,1,1,null,"GO:0071824","protein-DNA complex subunit organization",69,9,11.7,1,1,null,"GO:0048236","plant-type sporogenesis",23,5,4.55,1,1]
["GO:0009292","horizontal gene transfer",25,5,2.97,1,1,null,"GO:0048765","root hair cell differentiation",96,14,17.82,1,1,null,"GO:0009156","ribonucleoside monophosphate biosynthetic process",38,1,6.44,1,1,null,"GO:0009173","pyrimidine ribonucleoside monophosphate metabolic process",12,1,2.38,1,1]
["GO:0045786","negative regulation of cell cycle",61,11,7.24,1,1,null,"GO:0034032","purine nucleoside bisphosphate metabolic process",54,8,10.02,1,1,null,"GO:1905421","regulation of plant organ morphogenesis",37,4,6.27,1,1,null,"GO:0016129","phytosteroid biosynthetic process",12,5,2.38,1,1]
["GO:0060341","regulation of cellular localization",29,4,3.44,1,1,null,"GO:0071383","cellular response to steroid hormone stimulus",52,8,9.65,1,1,null,"GO:0018022","peptidyl-lysine methylation",55,2,9.32,1,1,null,"GO:0009174","pyrimidine ribonucleoside monophosphate biosynthetic process",11,1,2.18,1,1]
["GO:0071668","plant-type cell wall assembly",13,1,1.54,1,1,null,"GO:0010346","shoot axis formation",15,4,2.78,1,1,null,"GO:0043288","apocarotenoid metabolic process",39,16,6.61,1,1,null,"GO:0006740","NADPH regeneration",28,10,5.55,1,1]
["GO:2001057","reactive nitrogen species metabolic process",20,2,2.37,1,1,null,"GO:0009292","horizontal gene transfer",23,2,4.27,1,1,null,"GO:0043289","apocarotenoid biosynthetic process",24,11,4.07,1,1,null,"GO:0006743","ubiquinone metabolic process",18,2,3.56,1,1]
["GO:0030162","regulation of proteolysis",39,4,4.63,1,1,null,"GO:0045786","negative regulation of cell cycle",41,3,7.61,1,1,null,"GO:0015772","oligosaccharide transport",14,3,2.37,1,1,null,"GO:0009179","purine ribonucleoside diphosphate metabolic process",40,15,7.92,1,1]
["GO:0045017","glycerolipid biosynthetic process",115,5,13.65,1,1,null,"GO:0045787","positive regulation of cell cycle",31,3,5.75,1,1,null,"GO:0006714","sesquiterpenoid metabolic process",45,17,7.63,1,1,null,"GO:0070085","glycosylation",121,10,23.96,1,1]
["GO:1903320","regulation of protein modification by small protein conjugation or removal",11,1,1.31,1,1,null,"GO:0060341","regulation of cellular localization",30,2,5.57,1,1,null,"GO:0046460","neutral lipid biosynthetic process",19,3,3.22,1,1,null,"GO:1904029","regulation of cyclin-dependent protein kinase activity",19,1,3.76,1,1]
["GO:0071322","cellular response to carbohydrate stimulus",56,5,6.65,1,1,null,"GO:0006862","nucleotide transport",18,2,3.34,1,1,null,"GO:0046463","acylglycerol biosynthetic process",19,3,3.22,1,1,null,"GO:0045930","negative regulation of mitotic cell cycle",21,2,4.16,1,1]
["GO:0048017","inositol lipid-mediated signaling",16,1,1.9,1,1,null,"GO:0071668","plant-type cell wall assembly",13,2,2.41,1,1,null,"GO:0008064","regulation of actin polymerization or depolymerization",17,2,2.88,1,1,null,"GO:0009123","nucleoside monophosphate metabolic process",40,8,7.92,1,1]
["GO:0071326","cellular response to monosaccharide stimulus",20,1,2.37,1,1,null,"GO:2001057","reactive nitrogen species metabolic process",15,3,2.78,1,1,null,"GO:0035966","response to topologically incorrect protein",57,15,9.66,1,1,null,"GO:0033559","unsaturated fatty acid metabolic process",17,4,3.37,1,1]
["GO:0090697","post-embryonic plant organ morphogenesis",100,15,11.87,1,1,null,"GO:0097354","prenylation",11,1,2.04,1,1,null,"GO:0035967","cellular response to topologically incorrect protein",54,15,9.15,1,1,null,"GO:0009124","nucleoside monophosphate biosynthetic process",39,8,7.72,1,1]
["GO:0009991","response to extracellular stimulus",278,29,33,1,1,null,"GO:0045017","glycerolipid biosynthetic process",105,19,19.49,1,1,null,"GO:0071840","cellular component organization or biogenesis",3151,432,534.14,1,1,null,"GO:0009126","purine nucleoside monophosphate metabolic process",20,6,3.96,1,1]
["GO:1903311","regulation of mRNA metabolic process",98,4,11.63,1,1,null,"GO:0071326","cellular response to monosaccharide stimulus",18,1,3.34,1,1,null,"GO:0006743","ubiquinone metabolic process",19,4,3.22,1,1,null,"GO:0009127","purine nucleoside monophosphate biosynthetic process",20,6,3.96,1,1]
["GO:0010646","regulation of cell communication",403,39,47.84,1,1,null,"GO:0090697","post-embryonic plant organ morphogenesis",82,13,15.22,1,1,null,"GO:0072594","establishment of protein localization to organelle",253,39,42.89,1,1,null,"GO:0009129","pyrimidine nucleoside monophosphate metabolic process",15,1,2.97,1,1]
["GO:0010647","positive regulation of cell communication",85,12,10.09,1,1,null,"GO:0009991","response to extracellular stimulus",215,46,39.9,1,1,null,"GO:0072595","maintenance of protein localization in organelle",15,1,2.54,1,1,null,"GO:0016143","S-glycoside metabolic process",132,23,26.14,1,1]
["GO:1902100","negative regulation of metaphase/anaphase transition of cell cycle",10,1,1.19,1,1,null,"GO:1903311","regulation of mRNA metabolic process",97,15,18,1,1,null,"GO:0072596","establishment of protein localization to chloroplast",54,4,9.15,1,1,null,"GO:0016144","S-glycoside biosynthetic process",50,6,9.9,1,1]
["GO:1903313","positive regulation of mRNA metabolic process",59,2,7,1,1,null,"GO:0010646","regulation of cell communication",356,58,66.07,1,1,null,"GO:0072598","protein localization to chloroplast",54,4,9.15,1,1,null,"GO:0016145","S-glycoside catabolic process",10,3,1.98,1,1]
["GO:0010648","negative regulation of cell communication",102,12,12.11,1,1,null,"GO:0010647","positive regulation of cell communication",70,9,12.99,1,1,null,"GO:0009179","purine ribonucleoside diphosphate metabolic process",49,13,8.31,1,1,null,"GO:0009110","vitamin biosynthetic process",71,11,14.06,1,1]
["GO:0033692","cellular polysaccharide biosynthetic process",171,16,20.3,1,1,null,"GO:0010648","negative regulation of cell communication",88,17,16.33,1,1,null,"GO:0072599","establishment of protein localization to endoplasmic reticulum",37,1,6.27,1,1,null,"GO:0009112","nucleobase metabolic process",31,6,6.14,1,1]
["GO:2001020","regulation of response to DNA damage stimulus",26,2,3.09,1,1,null,"GO:0033692","cellular polysaccharide biosynthetic process",142,20,26.35,1,1,null,"GO:0015711","organic anion transport",129,26,21.87,1,1,null,"GO:0009119","ribonucleoside metabolic process",14,3,2.77,1,1]
["GO:0015849","organic acid transport",100,13,11.87,1,1,null,"GO:0009260","ribonucleotide biosynthetic process",112,11,20.79,1,1,null,"GO:0009123","nucleoside monophosphate metabolic process",44,1,7.46,1,1,null,"GO:0120252","hydrocarbon metabolic process",49,9,9.7,1,1]
["GO:0035383","thioester metabolic process",43,5,5.1,1,1,null,"GO:2001020","regulation of response to DNA damage stimulus",24,4,4.45,1,1,null,"GO:0009124","nucleoside monophosphate biosynthetic process",43,1,7.29,1,1,null,"GO:0009141","nucleoside triphosphate metabolic process",98,31,19.41,1,1]
["GO:0035384","thioester biosynthetic process",23,3,2.73,1,1,null,"GO:0015849","organic acid transport",77,14,14.29,1,1,null,"GO:0009126","purine nucleoside monophosphate metabolic process",22,1,3.73,1,1,null,"GO:0009142","nucleoside triphosphate biosynthetic process",49,12,9.7,1,1]
["GO:0006873","intracellular monoatomic ion homeostasis",146,7,17.33,1,1,null,"GO:0035383","thioester metabolic process",37,6,6.87,1,1,null,"GO:0009127","purine nucleoside monophosphate biosynthetic process",22,1,3.73,1,1,null,"GO:0019685","photosynthesis, dark reaction",16,5,3.17,1,1]
["GO:0033365","protein localization to organelle",274,38,32.53,1,1,null,"GO:0035384","thioester biosynthetic process",21,4,3.9,1,1,null,"GO:0098781","ncRNA transcription",18,2,3.05,1,1,null,"GO:0034050","programmed cell death induced by symbiont",59,11,11.68,1,1]
["GO:0043043","peptide biosynthetic process",580,173,68.85,1,1,null,"GO:0033365","protein localization to organelle",272,39,50.48,1,1,null,"GO:0046483","heterocycle metabolic process",5728,848,970.98,1,1,null,"GO:0120254","olefinic compound metabolic process",59,14,11.68,1,1]
["GO:0010639","negative regulation of organelle organization",33,5,3.92,1,1,null,"GO:0043043","peptide biosynthetic process",567,55,105.23,1,1,null,"GO:0000305","response to oxygen radical",14,2,2.37,1,1,null,"GO:0009145","purine nucleoside triphosphate biosynthetic process",36,9,7.13,1,1]
["GO:0006879","intracellular iron ion homeostasis",27,3,3.21,1,1,null,"GO:0010639","negative regulation of organelle organization",27,4,5.01,1,1,null,"GO:0046486","glycerolipid metabolic process",159,31,26.95,1,1,null,"GO:0009147","pyrimidine nucleoside triphosphate metabolic process",17,3,3.37,1,1]
["GO:0015833","peptide transport",15,1,1.78,1,1,null,"GO:0015833","peptide transport",13,7,2.41,1,1,null,"GO:0052386","cell wall thickening",29,6,4.92,1,1,null,"GO:0009148","pyrimidine nucleoside triphosphate biosynthetic process",16,3,3.17,1,1]
["GO:0009250","glucan biosynthetic process",121,9,14.36,1,1,null,"GO:0006820","monoatomic anion transport",23,4,4.27,1,1,null,"GO:0071027","nuclear RNA surveillance",15,1,2.54,1,1,null,"GO:0043934","sporulation",23,5,4.55,1,1]
["GO:0008300","isoprenoid catabolic process",20,4,2.37,1,1,null,"GO:0009259","ribonucleotide metabolic process",183,21,33.96,1,1,null,"GO:0009110","vitamin biosynthetic process",78,20,13.22,1,1,null,"GO:0000154","rRNA modification",36,9,7.13,1,1]
["GO:0009251","glucan catabolic process",24,3,2.85,1,1,null,"GO:0071331","cellular response to hexose stimulus",18,1,3.34,1,1,null,"GO:0040011","locomotion",26,9,4.41,1,1,null,"GO:0046434","organophosphate catabolic process",35,6,6.93,1,1]
["GO:0009259","ribonucleotide metabolic process",203,29,24.1,1,1,null,"GO:0043038","amino acid activation",50,2,9.28,1,1,null,"GO:0071029","nuclear ncRNA surveillance",12,1,2.03,1,1,null,"GO:0009130","pyrimidine nucleoside monophosphate biosynthetic process",14,1,2.77,1,1]
["GO:0071331","cellular response to hexose stimulus",20,1,2.37,1,1,null,"GO:0043039","tRNA aminoacylation",49,2,9.09,1,1,null,"GO:0009112","nucleobase metabolic process",35,5,5.93,1,1,null,"GO:0009132","nucleoside diphosphate metabolic process",50,16,9.9,1,1]
["GO:0006829","zinc ion transport",18,3,2.14,1,1,null,"GO:0000291","nuclear-transcribed mRNA catabolic process, exonucleolytic",23,1,4.27,1,1,null,"GO:0032786","positive regulation of DNA-templated transcription, elongation",25,5,4.24,1,1,null,"GO:0044419","biological process involved in interspecies interaction between organisms",1601,381,317.06,1,1]
["GO:0045732","positive regulation of protein catabolic process",28,3,3.32,1,1,null,"GO:0006813","potassium ion transport",40,8,7.42,1,1,null,"GO:0010467","gene expression",4265,685,722.98,1,1,null,"GO:0043207","response to external biotic stimulus",1590,378,314.88,1,1]
["GO:0043038","amino acid activation",50,8,5.94,1,1,null,"GO:0046173","polyol biosynthetic process",29,7,5.38,1,1,null,"GO:0009141","nucleoside triphosphate metabolic process",110,28,18.65,1,1,null,"GO:0009135","purine nucleoside diphosphate metabolic process",40,15,7.92,1,1]
["GO:0071616","acyl-CoA biosynthetic process",23,3,2.73,1,1,null,"GO:0048731","system development",2835,510,526.14,1,1,null,"GO:0009144","purine nucleoside triphosphate metabolic process",93,25,15.76,1,1,null,"GO:1903508","positive regulation of nucleic acid-templated transcription",278,69,55.05,1,1]
["GO:0000291","nuclear-transcribed mRNA catabolic process, exonucleolytic",23,2,2.73,1,1,null,"GO:0035670","plant-type ovary development",40,7,7.42,1,1,null,"GO:0009145","purine nucleoside triphosphate biosynthetic process",38,9,6.44,1,1,null,"GO:1903509","liposaccharide metabolic process",51,4,10.1,1,1]
["GO:0006812","monoatomic cation transport",225,16,26.71,1,1,null,"GO:0009220","pyrimidine ribonucleotide biosynthetic process",25,2,4.64,1,1,null,"GO:0009147","pyrimidine nucleoside triphosphate metabolic process",19,2,3.22,1,1,null,"GO:0071398","cellular response to fatty acid",136,30,26.93,1,1]
["GO:0006813","potassium ion transport",47,2,5.58,1,1,null,"GO:0090329","regulation of DNA-templated DNA replication",25,6,4.64,1,1,null,"GO:0009148","pyrimidine nucleoside triphosphate biosynthetic process",18,2,3.05,1,1,null,"GO:0098727","maintenance of cell number",58,17,11.49,1,1]
["GO:0006817","phosphate ion transport",25,1,2.97,1,1,null,"GO:0010498","proteasomal protein catabolic process",222,36,41.2,1,1,null,"GO:0007091","metaphase/anaphase transition of mitotic cell cycle",21,1,3.56,1,1,null,"GO:0070726","cell wall assembly",13,2,2.57,1,1]
["GO:0046173","polyol biosynthetic process",32,1,3.8,1,1,null,"GO:0002253","activation of immune response",38,7,7.05,1,1,null,"GO:0007093","mitotic cell cycle checkpoint signaling",29,2,4.92,1,1,null,"GO:0016102","diterpenoid biosynthetic process",20,3,3.96,1,1]
["GO:0048731","system development",3399,432,403.49,1,1,null,"GO:0000077","DNA damage checkpoint signaling",12,0,2.23,1,1,null,"GO:0071046","nuclear polyadenylation-dependent ncRNA catabolic process",12,1,2.03,1,1,null,"GO:0016106","sesquiterpenoid biosynthetic process",26,5,5.15,1,1]
["GO:0042398","cellular modified amino acid biosynthetic process",24,3,2.85,1,1,null,"GO:0000086","G2/M transition of mitotic cell cycle",16,0,2.97,1,1,null,"GO:0098727","maintenance of cell number",83,10,14.07,1,1,null,"GO:0016108","tetraterpenoid metabolic process",36,5,7.13,1,1]
["GO:0010608","post-transcriptional regulation of gene expression",191,19,22.67,1,1,null,"GO:0000338","protein deneddylation",11,0,2.04,1,1,null,"GO:0009132","nucleoside diphosphate metabolic process",61,14,10.34,1,1,null,"GO:0016109","tetraterpenoid biosynthetic process",26,4,5.15,1,1]
["GO:0030148","sphingolipid biosynthetic process",36,1,4.27,1,1,null,"GO:0000422","autophagy of mitochondrion",18,0,3.34,1,1,null,"GO:0009135","purine nucleoside diphosphate metabolic process",49,13,8.31,1,1,null,"GO:0007135","meiosis II",13,6,2.57,1,1]
["GO:0010496","intercellular transport",20,4,2.37,1,1,null,"GO:0000459","exonucleolytic trimming involved in rRNA processing",11,0,2.04,1,1,null,"GO:0071806","protein transmembrane transport",89,10,15.09,1,1,null,"GO:0043903","regulation of biological process involved in symbiotic interaction",24,3,4.75,1,1]
["GO:0010498","proteasomal protein catabolic process",229,13,27.18,1,1,null,"GO:0000467","exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, L...",11,0,2.04,1,1,null,"GO:0052314","phytoalexin metabolic process",17,4,2.88,1,1,null,"GO:0042558","pteridine-containing compound metabolic process",33,7,6.54,1,1]
["GO:0009225","nucleotide-sugar metabolic process",51,4,6.05,1,1,null,"GO:0000919","cell plate assembly",14,0,2.6,1,1,null,"GO:0052315","phytoalexin biosynthetic process",17,4,2.88,1,1,null,"GO:0042559","pteridine-containing compound biosynthetic process",15,4,2.97,1,1]
["GO:0002253","activation of immune response",43,6,5.1,1,1,null,"GO:0001510","RNA methylation",62,0,11.51,1,1,null,"GO:0042255","ribosome assembly",58,2,9.83,1,1,null,"GO:0009100","glycoprotein metabolic process",127,11,25.15,1,1]
["GO:0000045","autophagosome assembly",30,0,3.56,1,1,null,"GO:0006000","fructose metabolic process",10,0,1.86,1,1,null,"GO:1990066","energy quenching",16,3,2.71,1,1,null,"GO:0009101","glycoprotein biosynthetic process",116,10,22.97,1,1]
["GO:0000105","histidine biosynthetic process",11,0,1.31,1,1,null,"GO:0006074","(1->3)-beta-D-glucan metabolic process",10,0,1.86,1,1,null,"GO:0052317","camalexin metabolic process",16,3,2.71,1,1,null,"GO:0015865","purine nucleotide transport",17,4,3.37,1,1]
["GO:0000122","negative regulation of transcription by RNA polymerase II",27,0,3.21,1,1,null,"GO:0006086","acetyl-CoA biosynthetic process from pyruvate",11,0,2.04,1,1,null,"GO:0010476","gibberellin mediated signaling pathway",51,5,8.65,1,1,null,"GO:0071692","protein localization to extracellular region",21,6,4.16,1,1]
["GO:0000165","MAPK cascade",19,0,2.26,1,1,null,"GO:0006102","isocitrate metabolic process",10,0,1.86,1,1,null,"GO:0034050","programmed cell death induced by symbiont",69,16,11.7,1,1,null,"GO:0043062","extracellular structure organization",14,2,2.77,1,1]
["GO:0000184","nuclear-transcribed mRNA catabolic process, nonsense-mediated decay",10,0,1.19,1,1,null,"GO:0006270","DNA replication initiation",12,0,2.23,1,1,null,"GO:0098732","macromolecule deacylation",12,2,2.03,1,1,null,"GO:0008654","phospholipid biosynthetic process",120,24,23.76,1,1]
["GO:0000245","spliceosomal complex assembly",22,0,2.61,1,1,null,"GO:0006346","DNA methylation-dependent heterochromatin formation",11,0,2.04,1,1,null,"GO:0007062","sister chromatid cohesion",39,3,6.61,1,1,null,"GO:0098732","macromolecule deacylation",11,2,2.18,1,1]
["GO:0000303","response to superoxide",14,0,1.66,1,1,null,"GO:0006349","regulation of gene expression by genomic imprinting",10,0,1.86,1,1,null,"GO:0008033","tRNA processing",95,2,16.1,1,1,null,"GO:0045088","regulation of innate immune response",80,17,15.84,1,1]
["GO:0000305","response to oxygen radical",14,0,1.66,1,1,null,"GO:0006353","DNA-templated transcription termination",15,0,2.78,1,1,null,"GO:0046434","organophosphate catabolic process",39,7,6.61,1,1,null,"GO:0071367","cellular response to brassinosteroid stimulus",53,11,10.5,1,1]
["GO:0000338","protein deneddylation",11,0,1.31,1,1,null,"GO:0006491","N-glycan processing",10,0,1.86,1,1,null,"GO:0043207","response to external biotic stimulus",1988,497,337,1,1,null,"GO:0030198","extracellular matrix organization",14,2,2.77,1,1]
["GO:0000380","alternative mRNA splicing, via spliceosome",18,0,2.14,1,1,null,"GO:0006621","protein retention in ER lumen",10,0,1.86,1,1,null,"GO:0008037","cell recognition",40,8,6.78,1,1,null,"GO:0044403","biological process involved in symbiotic interaction",75,15,14.85,1,1]
["GO:0000422","autophagy of mitochondrion",18,0,2.14,1,1,null,"GO:0006901","vesicle coating",10,0,1.86,1,1,null,"GO:0009100","glycoprotein metabolic process",140,5,23.73,1,1,null,"GO:0090501","RNA phosphodiester bond hydrolysis",46,14,9.11,1,1]
["GO:0000919","cell plate assembly",14,0,1.66,1,1,null,"GO:0006903","vesicle targeting",16,0,2.97,1,1,null,"GO:0009101","glycoprotein biosynthetic process",129,5,21.87,1,1,null,"GO:0090502","RNA phosphodiester bond hydrolysis, endonucleolytic",18,5,3.56,1,1]
["GO:0001678","intracellular glucose homeostasis",22,0,2.61,1,1,null,"GO:0007020","microtubule nucleation",13,0,2.41,1,1,null,"GO:0072521","purine-containing compound metabolic process",255,52,43.23,1,1,null,"GO:0048764","trichoblast maturation",96,22,19.01,1,1]
["GO:0001709","cell fate determination",10,0,1.19,1,1,null,"GO:0007265","Ras protein signal transduction",11,0,2.04,1,1,null,"GO:0072522","purine-containing compound biosynthetic process",120,18,20.34,1,1,null,"GO:0090503","RNA phosphodiester bond hydrolysis, exonucleolytic",11,3,2.18,1,1]
["GO:0002098","tRNA wobble uridine modification",15,0,1.78,1,1,null,"GO:0008356","asymmetric cell division",18,0,3.34,1,1,null,"GO:0000460","maturation of 5.8S rRNA",31,1,5.25,1,1,null,"GO:0034030","ribonucleoside bisphosphate biosynthetic process",34,6,6.73,1,1]
["GO:0002183","cytoplasmic translational initiation",17,0,2.02,1,1,null,"GO:0008360","regulation of cell shape",16,0,2.97,1,1,null,"GO:0010410","hemicellulose metabolic process",70,6,11.87,1,1,null,"GO:0034032","purine nucleoside bisphosphate metabolic process",54,10,10.69,1,1]
["GO:0006020","inositol metabolic process",12,0,1.42,1,1,null,"GO:0009095","aromatic amino acid family biosynthetic process, prephenate pathway",11,0,2.04,1,1,null,"GO:0007051","spindle organization",63,8,10.68,1,1,null,"GO:0034033","purine nucleoside bisphosphate biosynthetic process",34,6,6.73,1,1]
["GO:0006074","(1->3)-beta-D-glucan metabolic process",12,0,1.42,1,1,null,"GO:0009934","regulation of meristem structural organization",11,0,2.04,1,1,null,"GO:0044784","metaphase/anaphase transition of cell cycle",21,1,3.56,1,1,null,"GO:0071383","cellular response to steroid hormone stimulus",52,11,10.3,1,1]
["GO:0006075","(1->3)-beta-D-glucan biosynthetic process",11,0,1.31,1,1,null,"GO:0009938","negative regulation of gibberellic acid mediated signaling pathway",11,0,2.04,1,1,null,"GO:0000466","maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)",20,1,3.39,1,1,null,"GO:0010346","shoot axis formation",15,5,2.97,1,1]
["GO:0006120","mitochondrial electron transport, NADH to ubiquinone",14,0,1.66,1,1,null,"GO:0009956","radial pattern formation",17,0,3.16,1,1,null,"GO:0044786","cell cycle DNA replication",64,8,10.85,1,1,null,"GO:0009292","horizontal gene transfer",23,7,4.55,1,1]
["GO:0006367","transcription initiation at RNA polymerase II promoter",32,0,3.8,1,1,null,"GO:0010091","trichome branching",21,0,3.9,1,1,null,"GO:0000469","cleavage involved in rRNA processing",25,1,4.24,1,1,null,"GO:0045786","negative regulation of cell cycle",41,7,8.12,1,1]
["GO:0006378","mRNA polyadenylation",25,0,2.97,1,1,null,"GO:0010100","negative regulation of photomorphogenesis",13,0,2.41,1,1,null,"GO:0007059","chromosome segregation",162,9,27.46,1,1,null,"GO:0006862","nucleotide transport",18,4,3.56,1,1]
["GO:0006379","mRNA cleavage",13,0,1.54,1,1,null,"GO:0010103","stomatal complex morphogenesis",15,0,2.78,1,1,null,"GO:1905957","regulation of cellular response to alcohol",119,41,20.17,1,1,null,"GO:0071668","plant-type cell wall assembly",13,2,2.57,1,1]
["GO:0006474","N-terminal protein amino acid acetylation",16,0,1.9,1,1,null,"GO:0010239","chloroplast mRNA processing",10,0,1.86,1,1,null,"GO:1905958","negative regulation of cellular response to alcohol",52,17,8.81,1,1,null,"GO:0097354","prenylation",11,3,2.18,1,1]
["GO:0006476","protein deacetylation",10,0,1.19,1,1,null,"GO:0010389","regulation of G2/M transition of mitotic cell cycle",15,0,2.78,1,1,null,"GO:0044770","cell cycle phase transition",102,5,17.29,1,1,null,"GO:0030162","regulation of proteolysis",38,5,7.53,1,1]
["GO:0006491","N-glycan processing",10,0,1.19,1,1,null,"GO:0010586","miRNA metabolic process",11,0,2.04,1,1,null,"GO:1902750","negative regulation of cell cycle G2/M phase transition",13,1,2.2,1,1,null,"GO:0045017","glycerolipid biosynthetic process",105,22,20.79,1,1]
["GO:0006505","GPI anchor metabolic process",30,0,3.56,1,1,null,"GO:0010833","telomere maintenance via telomere lengthening",10,0,1.86,1,1,null,"GO:0010440","stomatal lineage progression",23,1,3.9,1,1,null,"GO:0045047","protein targeting to ER",36,3,7.13,1,1]
["GO:0006506","GPI anchor biosynthetic process",29,0,3.44,1,1,null,"GO:0016074","sno(s)RNA metabolic process",16,0,2.97,1,1,null,"GO:0044772","mitotic cell cycle phase transition",80,5,13.56,1,1,null,"GO:0071326","cellular response to monosaccharide stimulus",18,6,3.56,1,1]
["GO:0006547","histidine metabolic process",11,0,1.31,1,1,null,"GO:0016078","tRNA catabolic process",10,0,1.86,1,1,null,"GO:0042214","terpene metabolic process",26,8,4.41,1,1,null,"GO:0009991","response to extracellular stimulus",215,57,42.58,1,1]
["GO:0006598","polyamine catabolic process",10,0,1.19,1,1,null,"GO:0016180","snRNA processing",16,0,2.97,1,1,null,"GO:0044774","mitotic DNA integrity checkpoint signaling",15,1,2.54,1,1,null,"GO:1903311","regulation of mRNA metabolic process",97,22,19.21,1,1]
["GO:0006623","protein targeting to vacuole",36,0,4.27,1,1,null,"GO:0018026","peptidyl-lysine monomethylation",10,0,1.86,1,1,null,"GO:0045488","pectin metabolic process",109,5,18.48,1,1,null,"GO:0010647","positive regulation of cell communication",70,20,13.86,1,1]
["GO:0006625","protein targeting to peroxisome",17,0,2.02,1,1,null,"GO:0018195","peptidyl-arginine modification",11,0,2.04,1,1,null,"GO:0007088","regulation of mitotic nuclear division",16,1,2.71,1,1,null,"GO:1903313","positive regulation of mRNA metabolic process",59,12,11.68,1,1]
["GO:0006661","phosphatidylinositol biosynthetic process",50,0,5.94,1,1,null,"GO:0018198","peptidyl-cysteine modification",17,0,3.16,1,1,null,"GO:0000459","exonucleolytic trimming involved in rRNA processing",11,1,1.86,1,1,null,"GO:0010648","negative regulation of cell communication",88,25,17.43,1,1]
["GO:0006664","glycolipid metabolic process",53,0,6.29,1,1,null,"GO:0018216","peptidyl-arginine methylation",10,0,1.86,1,1,null,"GO:0001522","pseudouridine synthesis",23,1,3.9,1,1,null,"GO:0009260","ribonucleotide biosynthetic process",112,25,22.18,1,1]
["GO:0006670","sphingosine metabolic process",10,0,1.19,1,1,null,"GO:0018230","peptidyl-L-cysteine S-palmitoylation",17,0,3.16,1,1,null,"GO:0036294","cellular response to decreased oxygen levels",203,88,34.41,1,1,null,"GO:2001020","regulation of response to DNA damage stimulus",24,4,4.75,1,1]
["GO:0006722","triterpenoid metabolic process",10,0,1.19,1,1,null,"GO:0018231","peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine",17,0,3.16,1,1,null,"GO:0033865","nucleoside bisphosphate metabolic process",60,11,10.17,1,1,null,"GO:0035383","thioester metabolic process",37,8,7.33,1,1]
["GO:0006743","ubiquinone metabolic process",19,0,2.26,1,1,null,"GO:0030488","tRNA methylation",28,0,5.2,1,1,null,"GO:0033866","nucleoside bisphosphate biosynthetic process",37,5,6.27,1,1,null,"GO:0015849","organic acid transport",77,20,15.25,1,1]
["GO:0006744","ubiquinone biosynthetic process",19,0,2.26,1,1,null,"GO:0030656","regulation of vitamin metabolic process",10,0,1.86,1,1,null,"GO:0016052","carbohydrate catabolic process",148,36,25.09,1,1,null,"GO:0035384","thioester biosynthetic process",21,4,4.16,1,1]
["GO:0006787","porphyrin-containing compound catabolic process",49,0,5.82,1,1,null,"GO:0031060","regulation of histone methylation",17,0,3.16,1,1,null,"GO:0016053","organic acid biosynthetic process",592,102,100.35,1,1,null,"GO:0043043","peptide biosynthetic process",567,132,112.29,1,1]
["GO:0006863","purine nucleobase transport",13,0,1.54,1,1,null,"GO:0031125","rRNA 3'-end processing",14,0,2.6,1,1,null,"GO:0016054","organic acid catabolic process",156,43,26.44,1,1,null,"GO:0010639","negative regulation of organelle organization",27,5,5.35,1,1]
["GO:0006882","intracellular zinc ion homeostasis",13,0,1.54,1,1,null,"GO:0031126","sno(s)RNA 3'-end processing",12,0,2.23,1,1,null,"GO:0001510","RNA methylation",62,1,10.51,1,1,null,"GO:0015833","peptide transport",13,5,2.57,1,1]
["GO:0006885","regulation of pH",38,0,4.51,1,1,null,"GO:0031167","rRNA methylation",23,0,4.27,1,1,null,"GO:0009292","horizontal gene transfer",25,4,4.24,1,1,null,"GO:0008300","isoprenoid catabolic process",20,4,3.96,1,1]
["GO:0006892","post-Golgi vesicle-mediated transport",38,0,4.51,1,1,null,"GO:0031570","DNA integrity checkpoint signaling",14,0,2.6,1,1,null,"GO:0006862","nucleotide transport",19,4,3.22,1,1,null,"GO:0071331","cellular response to hexose stimulus",18,6,3.56,1,1]
["GO:0006893","Golgi to plasma membrane transport",19,0,2.26,1,1,null,"GO:0032968","positive regulation of transcription elongation by RNA polymerase II",19,0,3.53,1,1,null,"GO:0016070","RNA metabolic process",4334,620,734.68,1,1,null,"GO:0045732","positive regulation of protein catabolic process",27,2,5.35,1,1]
["GO:0006896","Golgi to vacuole transport",16,0,1.9,1,1,null,"GO:0034063","stress granule assembly",12,0,2.23,1,1,null,"GO:0016072","rRNA metabolic process",249,14,42.21,1,1,null,"GO:0043038","amino acid activation",50,16,9.9,1,1]
["GO:0006904","vesicle docking involved in exocytosis",11,0,1.31,1,1,null,"GO:0034427","nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'",13,0,2.41,1,1,null,"GO:0016074","sno(s)RNA metabolic process",16,2,2.71,1,1,null,"GO:0043039","tRNA aminoacylation",49,16,9.7,1,1]
["GO:0006906","vesicle fusion",44,0,5.22,1,1,null,"GO:0034472","snRNA 3'-end processing",14,0,2.6,1,1,null,"GO:0007017","microtubule-based process",216,23,36.62,1,1,null,"GO:0046189","phenol-containing compound biosynthetic process",17,3,3.37,1,1]
["GO:0006914","autophagy",82,0,9.73,1,1,null,"GO:0034475","U4 snRNA 3'-end processing",10,0,1.86,1,1,null,"GO:0016078","tRNA catabolic process",10,1,1.7,1,1,null,"GO:0071616","acyl-CoA biosynthetic process",21,4,4.16,1,1]
["GO:0006995","cellular response to nitrogen starvation",28,0,3.32,1,1,null,"GO:0034765","regulation of monoatomic ion transmembrane transport",10,0,1.86,1,1,null,"GO:0030641","regulation of cellular pH",28,16,4.75,1,1,null,"GO:0000291","nuclear-transcribed mRNA catabolic process, exonucleolytic",23,4,4.55,1,1]
["GO:0007009","plasma membrane organization",11,0,1.31,1,1,null,"GO:0035437","maintenance of protein localization in endoplasmic reticulum",11,0,2.04,1,1,null,"GO:0019222","regulation of metabolic process",3962,759,671.62,1,1,null,"GO:0006817","phosphate ion transport",17,2,3.37,1,1]
["GO:0007032","endosome organization",14,0,1.66,1,1,null,"GO:0036260","RNA capping",14,0,2.6,1,1,null,"GO:0090354","regulation of auxin metabolic process",20,2,3.39,1,1,null,"GO:0046173","polyol biosynthetic process",29,6,5.74,1,1]
["GO:0007034","vacuolar transport",103,0,12.23,1,1,null,"GO:0040020","regulation of meiotic nuclear division",12,0,2.23,1,1,null,"GO:0015865","purine nucleotide transport",18,4,3.05,1,1,null,"GO:0048731","system development",2835,670,561.44,1,1]
["GO:0007035","vacuolar acidification",10,0,1.19,1,1,null,"GO:0042770","signal transduction in response to DNA damage",13,0,2.41,1,1,null,"GO:0034030","ribonucleoside bisphosphate biosynthetic process",37,5,6.27,1,1,null,"GO:0035670","plant-type ovary development",40,8,7.92,1,1]
["GO:0007041","lysosomal transport",10,0,1.19,1,1,null,"GO:0043144","sno(s)RNA processing",16,0,2.97,1,1,null,"GO:0015868","purine ribonucleotide transport",14,3,2.37,1,1,null,"GO:0009220","pyrimidine ribonucleotide biosynthetic process",25,4,4.95,1,1]
["GO:0007052","mitotic spindle organization",32,0,3.8,1,1,null,"GO:0043269","regulation of monoatomic ion transport",17,0,3.16,1,1,null,"GO:0034033","purine nucleoside bisphosphate biosynthetic process",37,5,6.27,1,1,null,"GO:0090329","regulation of DNA-templated DNA replication",25,7,4.95,1,1]
["GO:0007140","male meiotic nuclear division",22,0,2.61,1,1,null,"GO:0043628","regulatory ncRNA 3'-end processing",21,0,3.9,1,1,null,"GO:0010404","cell wall hydroxyproline-rich glycoprotein metabolic process",12,1,2.03,1,1,null,"GO:0002253","activation of immune response",38,10,7.53,1,1]
["GO:0007584","response to nutrient",13,0,1.54,1,1,null,"GO:0043633","polyadenylation-dependent RNA catabolic process",12,0,2.23,1,1,null,"GO:0009260","ribonucleotide biosynthetic process",120,17,20.34,1,1,null,"GO:0000002","mitochondrial genome maintenance",13,0,2.57,1,1]
["GO:0008037","cell recognition",40,0,4.75,1,1,null,"GO:0043634","polyadenylation-dependent ncRNA catabolic process",12,0,2.23,1,1,null,"GO:0019216","regulation of lipid metabolic process",79,17,13.39,1,1,null,"GO:0006029","proteoglycan metabolic process",12,0,2.38,1,1]
["GO:0008284","positive regulation of cell population proliferation",21,0,2.49,1,1,null,"GO:0044804","autophagy of nucleus",14,0,2.6,1,1,null,"GO:0007031","peroxisome organization",38,8,6.44,1,1,null,"GO:0006312","mitotic recombination",10,0,1.98,1,1]
["GO:0008535","respiratory chain complex IV assembly",11,0,1.31,1,1,null,"GO:0045144","meiotic sister chromatid segregation",11,0,2.04,1,1,null,"GO:0051336","regulation of hydrolase activity",67,15,11.36,1,1,null,"GO:0006490","oligosaccharide-lipid intermediate biosynthetic process",13,0,2.57,1,1]
["GO:0009051","pentose-phosphate shunt, oxidative branch",11,0,1.31,1,1,null,"GO:0045931","positive regulation of mitotic cell cycle",11,0,2.04,1,1,null,"GO:0009250","glucan biosynthetic process",121,22,20.51,1,1,null,"GO:0006620","post-translational protein targeting to endoplasmic reticulum membrane",15,0,2.97,1,1]
["GO:0009065","glutamine family amino acid catabolic process",13,0,1.54,1,1,null,"GO:0046365","monosaccharide catabolic process",10,0,1.86,1,1,null,"GO:0051338","regulation of transferase activity",67,2,11.36,1,1,null,"GO:0006801","superoxide metabolic process",13,0,2.57,1,1]
["GO:0009247","glycolipid biosynthetic process",47,0,5.58,1,1,null,"GO:0046839","phospholipid dephosphorylation",20,0,3.71,1,1,null,"GO:1902749","regulation of cell cycle G2/M phase transition",30,4,5.09,1,1,null,"GO:0007020","microtubule nucleation",13,0,2.57,1,1]
["GO:0009310","amine catabolic process",10,0,1.19,1,1,null,"GO:0046856","phosphatidylinositol dephosphorylation",17,0,3.16,1,1,null,"GO:0070482","response to oxygen levels",280,109,47.46,1,1,null,"GO:0009083","branched-chain amino acid catabolic process",20,0,3.96,1,1]
["GO:0009313","oligosaccharide catabolic process",17,0,2.02,1,1,null,"GO:0048199","vesicle targeting, to, from or within Golgi",11,0,2.04,1,1,null,"GO:0016042","lipid catabolic process",110,32,18.65,1,1,null,"GO:0009095","aromatic amino acid family biosynthetic process, prephenate pathway",11,0,2.18,1,1]
["GO:0009423","chorismate biosynthetic process",10,0,1.19,1,1,null,"GO:0048766","root hair initiation",13,0,2.41,1,1,null,"GO:0016043","cellular component organization",2464,355,417.69,1,1,null,"GO:0009098","leucine biosynthetic process",11,0,2.18,1,1]
["GO:0009556","microsporogenesis",21,0,2.49,1,1,null,"GO:0051177","meiotic sister chromatid cohesion",11,0,2.04,1,1,null,"GO:0010965","regulation of mitotic sister chromatid separation",14,1,2.37,1,1,null,"GO:0009269","response to desiccation",17,0,3.37,1,1]
["GO:0009616","RNAi-mediated antiviral immune response",11,0,1.31,1,1,null,"GO:0051445","regulation of meiotic cell cycle",15,0,2.78,1,1,null,"GO:0060147","regulation of post-transcriptional gene silencing",17,3,2.88,1,1,null,"GO:0009423","chorismate biosynthetic process",10,0,1.98,1,1]
["GO:0009638","phototropism",23,0,2.73,1,1,null,"GO:0051552","flavone metabolic process",11,0,2.04,1,1,null,"GO:0090329","regulation of DNA-templated DNA replication",38,3,6.44,1,1,null,"GO:0009704","de-etiolation",13,0,2.57,1,1]
["GO:0009649","entrainment of circadian clock",18,0,2.14,1,1,null,"GO:0051553","flavone biosynthetic process",11,0,2.04,1,1,null,"GO:0010191","mucilage metabolic process",33,3,5.59,1,1,null,"GO:0010117","photoprotection",12,0,2.38,1,1]
["GO:0009768","photosynthesis, light harvesting in photosystem I",23,0,2.73,1,1,null,"GO:0051554","flavonol metabolic process",11,0,2.04,1,1,null,"GO:0044706","multi-multicellular organism process",209,42,35.43,1,1,null,"GO:0010189","vitamin E biosynthetic process",13,0,2.57,1,1]
["GO:0009819","drought recovery",11,0,1.31,1,1,null,"GO:0051555","flavonol biosynthetic process",11,0,2.04,1,1,null,"GO:0002682","regulation of immune system process",106,17,17.97,1,1,null,"GO:0010384","cell wall proteoglycan metabolic process",11,0,2.18,1,1]
["GO:0009833","plant-type primary cell wall biogenesis",19,0,2.26,1,1,null,"GO:0051643","endoplasmic reticulum localization",10,0,1.86,1,1,null,"GO:0002683","negative regulation of immune system process",26,3,4.41,1,1,null,"GO:0010404","cell wall hydroxyproline-rich glycoprotein metabolic process",11,0,2.18,1,1]
["GO:0009875","pollen-pistil interaction",25,0,2.97,1,1,null,"GO:0061726","mitochondrion disassembly",18,0,3.34,1,1,null,"GO:0002684","positive regulation of immune system process",57,11,9.66,1,1,null,"GO:0010405","arabinogalactan protein metabolic process",10,0,1.98,1,1]
["GO:0009903","chloroplast avoidance movement",10,0,1.19,1,1,null,"GO:0061817","endoplasmic reticulum-plasma membrane tethering",10,0,1.86,1,1,null,"GO:0065007","biological regulation",6510,1273,1103.54,1,1,null,"GO:0010497","plasmodesmata-mediated intercellular transport",13,0,2.57,1,1]
["GO:0009969","xyloglucan biosynthetic process",14,0,1.66,1,1,null,"GO:0070475","rRNA base methylation",14,0,2.6,1,1,null,"GO:0006073","cellular glucan metabolic process",187,37,31.7,1,1,null,"GO:0019430","removal of superoxide radicals",10,0,1.98,1,1]
["GO:0009970","cellular response to sulfate starvation",13,0,1.54,1,1,null,"GO:0071025","RNA surveillance",16,0,2.97,1,1,null,"GO:1900673","olefin metabolic process",23,4,3.9,1,1,null,"GO:0030026","intracellular manganese ion homeostasis",10,0,1.98,1,1]
["GO:0010039","response to iron ion",18,0,2.14,1,1,null,"GO:0071027","nuclear RNA surveillance",15,0,2.78,1,1,null,"GO:0006074","(1->3)-beta-D-glucan metabolic process",12,3,2.03,1,1,null,"GO:0030050","vesicle transport along actin filament",12,0,2.38,1,1]
["GO:0010044","response to aluminum ion",13,0,1.54,1,1,null,"GO:0071029","nuclear ncRNA surveillance",12,0,2.23,1,1,null,"GO:1900674","olefin biosynthetic process",23,4,3.9,1,1,null,"GO:0031023","microtubule organizing center organization",10,0,1.98,1,1]
["GO:0010072","primary shoot apical meristem specification",11,0,1.31,1,1,null,"GO:0071035","nuclear polyadenylation-dependent rRNA catabolic process",12,0,2.23,1,1,null,"GO:0051304","chromosome separation",17,1,2.88,1,1,null,"GO:0032042","mitochondrial DNA metabolic process",11,0,2.18,1,1]
["GO:0010100","negative regulation of photomorphogenesis",15,0,1.78,1,1,null,"GO:0071038","nuclear polyadenylation-dependent tRNA catabolic process",10,0,1.86,1,1,null,"GO:0051306","mitotic sister chromatid separation",15,1,2.54,1,1,null,"GO:0032776","DNA methylation on cytosine",10,0,1.98,1,1]
["GO:0010117","photoprotection",14,0,1.66,1,1,null,"GO:0071046","nuclear polyadenylation-dependent ncRNA catabolic process",12,0,2.23,1,1,null,"GO:0009220","pyrimidine ribonucleotide biosynthetic process",27,2,4.58,1,1,null,"GO:0036297","interstrand cross-link repair",14,0,2.77,1,1]
["GO:0010167","response to nitrate",20,0,2.37,1,1,null,"GO:0072595","maintenance of protein localization in organelle",14,0,2.6,1,1,null,"GO:0033015","tetrapyrrole catabolic process",49,19,8.31,1,1,null,"GO:0042147","retrograde transport, endosome to Golgi",27,0,5.35,1,1]
["GO:0010196","nonphotochemical quenching",16,0,1.9,1,1,null,"GO:0090503","RNA phosphodiester bond hydrolysis, exonucleolytic",11,0,2.04,1,1,null,"GO:0046189","phenol-containing compound biosynthetic process",27,2,4.58,1,1,null,"GO:0042360","vitamin E metabolic process",13,0,2.57,1,1]
["GO:0010257","NADH dehydrogenase complex assembly",25,0,2.97,1,1,null,"GO:0106354","tRNA surveillance",10,0,1.86,1,1,null,"GO:0006029","proteoglycan metabolic process",13,1,2.2,1,1,null,"GO:0045039","protein insertion into mitochondrial inner membrane",14,0,2.77,1,1]
["GO:0010267","ta-siRNA processing",15,0,1.78,1,1,null,"GO:0110154","RNA decapping",13,0,2.41,1,1,null,"GO:0032881","regulation of polysaccharide metabolic process",41,8,6.95,1,1,null,"GO:0046113","nucleobase catabolic process",10,0,1.98,1,1]
["GO:0010506","regulation of autophagy",19,0,2.26,1,1,null,"GO:0110156","methylguanosine-cap decapping",12,0,2.23,1,1,null,"GO:0010972","negative regulation of G2/M transition of mitotic cell cycle",12,1,2.03,1,1,null,"GO:0051204","protein insertion into mitochondrial membrane",19,0,3.76,1,1]
["GO:0010563","negative regulation of phosphorus metabolic process",14,0,1.66,1,1,null,"GO:0140718","facultative heterochromatin formation",13,0,2.41,1,1,null,"GO:0032885","regulation of polysaccharide biosynthetic process",29,7,4.92,1,1,null,"GO:0071450","cellular response to oxygen radical",10,0,1.98,1,1]
["GO:0015693","magnesium ion transport",20,0,2.37,1,1,null,"GO:1902652","secondary alcohol metabolic process",10,0,1.86,1,1,null,"GO:0009218","pyrimidine ribonucleotide metabolic process",27,2,4.58,1,1,null,"GO:0071451","cellular response to superoxide",10,0,1.98,1,1]
["GO:0015695","organic cation transport",11,0,1.31,1,1,null,"GO:1903426","regulation of reactive oxygen species biosynthetic process",11,0,2.04,1,1,null,"GO:0015849","organic acid transport",100,23,16.95,1,1,null,"GO:0090151","establishment of protein localization to mitochondrial membrane",22,0,4.36,1,1]
["GO:0015865","purine nucleotide transport",18,0,2.14,1,1,null,"GO:2000023","regulation of lateral root development",12,0,2.23,1,1,null,"GO:2000112","regulation of cellular macromolecule biosynthetic process",147,27,24.92,1,1,null,"GO:0098656","monoatomic anion transmembrane transport",12,0,2.38,1,1]
["GO:0015866","ADP transport",11,0,1.31,1,1,null,"GO:2000067","regulation of root morphogenesis",16,0,2.97,1,1,null,"GO:0050794","regulation of cellular process",4717,941,799.6,1,1,null,"GO:0099518","vesicle cytoskeletal trafficking",13,0,2.57,1,1]
["GO:0015867","ATP transport",11,0,1.31,1,1,null,"GO:2000904","regulation of starch metabolic process",18,0,3.34,1,1,null,"GO:0033045","regulation of sister chromatid segregation",22,1,3.73,1,1,null,"GO:1900426","positive regulation of defense response to bacterium",16,0,3.17,1,1]
["GO:0015868","purine ribonucleotide transport",14,0,1.66,1,1,null,"GO:2001289","lipid X metabolic process",10,0,1.86,1,1,null,"GO:0033046","negative regulation of sister chromatid segregation",10,1,1.7,1,1,null,"GO:2001289","lipid X metabolic process",10,0,1.98,1,1]
["GO:0015914","phospholipid transport",17,0,2.02,1,1,{"$nulls":9},"GO:0010166","wax metabolic process",34,6,5.76,1,1]
["GO:0015919","peroxisomal membrane transport",18,0,2.14,1,1,{"$nulls":9},"GO:0033047","regulation of mitotic sister chromatid segregation",10,1,1.7,1,1]
["GO:0015996","chlorophyll catabolic process",39,0,4.63,1,1,{"$nulls":9},"GO:1900618","regulation of shoot system morphogenesis",13,3,2.2,1,1]
["GO:0016078","tRNA catabolic process",10,0,1.19,1,1,{"$nulls":9},"GO:0033048","negative regulation of mitotic sister chromatid segregation",10,1,1.7,1,1]
["GO:0016119","carotene metabolic process",16,0,1.9,1,1,{"$nulls":9},"GO:0072662","protein localization to peroxisome",17,7,2.88,1,1]
["GO:0016236","macroautophagy",40,0,4.75,1,1,{"$nulls":9},"GO:0015833","peptide transport",15,3,2.54,1,1]
["GO:0016482","cytosolic transport",34,0,4.04,1,1,{"$nulls":9},"GO:0072663","establishment of protein localization to peroxisome",17,7,2.88,1,1]
["GO:0016558","protein import into peroxisome matrix",12,0,1.42,1,1,{"$nulls":9},"GO:0072665","protein localization to vacuole",51,20,8.65,1,1]
["GO:0016575","histone deacetylation",10,0,1.19,1,1,{"$nulls":9},"GO:0035266","meristem growth",81,7,13.73,1,1]
["GO:0016973","poly(A)+ mRNA export from nucleus",11,0,1.31,1,1,{"$nulls":9},"GO:0072666","establishment of protein localization to vacuole",51,20,8.65,1,1]
["GO:0018026","peptidyl-lysine monomethylation",10,0,1.19,1,1,{"$nulls":9},"GO:0006040","amino sugar metabolic process",28,1,4.75,1,1]
["GO:0018107","peptidyl-threonine phosphorylation",12,0,1.42,1,1,{"$nulls":9},"GO:0046939","nucleotide phosphorylation",47,13,7.97,1,1]
["GO:0018198","peptidyl-cysteine modification",19,0,2.26,1,1,{"$nulls":9},"GO:0051493","regulation of cytoskeleton organization",62,2,10.51,1,1]
["GO:0018210","peptidyl-threonine modification",12,0,1.42,1,1,{"$nulls":9},"GO:0048284","organelle fusion",77,13,13.05,1,1]
["GO:0018230","peptidyl-L-cysteine S-palmitoylation",19,0,2.26,1,1,{"$nulls":9},"GO:0051494","negative regulation of cytoskeleton organization",14,2,2.37,1,1]
["GO:0018231","peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine",19,0,2.26,1,1,{"$nulls":9},"GO:0033037","polysaccharide localization",42,10,7.12,1,1]
["GO:0018342","protein prenylation",11,0,1.31,1,1,{"$nulls":9},"GO:0072655","establishment of protein localization to mitochondrion",54,2,9.15,1,1]
["GO:0018345","protein palmitoylation",25,0,2.97,1,1,{"$nulls":9},"GO:0072657","protein localization to membrane",101,10,17.12,1,1]
["GO:0019288","isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway",11,0,1.31,1,1,{"$nulls":9},"GO:1903825","organic acid transmembrane transport",67,12,11.36,1,1]
["GO:0019321","pentose metabolic process",16,0,1.9,1,1,{"$nulls":9},"GO:1903050","regulation of proteolysis involved in protein catabolic process",34,6,5.76,1,1]
["GO:0019374","galactolipid metabolic process",14,0,1.66,1,1,{"$nulls":9},"GO:1903052","positive regulation of proteolysis involved in protein catabolic process",26,4,4.41,1,1]
["GO:0019375","galactolipid biosynthetic process",12,0,1.42,1,1,{"$nulls":9},"GO:0090304","nucleic acid metabolic process",4764,646,807.57,1,1]
["GO:0019430","removal of superoxide radicals",12,0,1.42,1,1,{"$nulls":9},"GO:0000959","mitochondrial RNA metabolic process",69,1,11.7,1,1]
["GO:0019682","glyceraldehyde-3-phosphate metabolic process",13,0,1.54,1,1,{"$nulls":9},"GO:0016556","mRNA modification",49,1,8.31,1,1]
["GO:0019915","lipid storage",19,0,2.26,1,1,{"$nulls":9},"GO:0042770","signal transduction in response to DNA damage",16,1,2.71,1,1]
["GO:0022406","membrane docking",42,0,4.99,1,1,{"$nulls":9},"GO:0045165","cell fate commitment",67,5,11.36,1,1]
["GO:0022412","cellular process involved in reproduction in multicellular organism",47,0,5.58,1,1,{"$nulls":9},"GO:0000002","mitochondrial genome maintenance",13,0,2.2,1,1]
["GO:0030048","actin filament-based movement",16,0,1.9,1,1,{"$nulls":9},"GO:0000079","regulation of cyclin-dependent protein serine/threonine kinase activity",42,0,7.12,1,1]
["GO:0030050","vesicle transport along actin filament",12,0,1.42,1,1,{"$nulls":9},"GO:0000105","histidine biosynthetic process",11,0,1.86,1,1]
["GO:0030641","regulation of cellular pH",28,0,3.32,1,1,{"$nulls":9},"GO:0000394","RNA splicing, via endonucleolytic cleavage and ligation",14,0,2.37,1,1]
["GO:0030705","cytoskeleton-dependent intracellular transport",22,0,2.61,1,1,{"$nulls":9},"GO:0000462","maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)",37,0,6.27,1,1]
["GO:0032509","endosome transport via multivesicular body sorting pathway",32,0,3.8,1,1,{"$nulls":9},"GO:0000463","maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)",18,0,3.05,1,1]
["GO:0032511","late endosome to vacuole transport via multivesicular body sorting pathway",25,0,2.97,1,1,{"$nulls":9},"GO:0000470","maturation of LSU-rRNA",27,0,4.58,1,1]
["GO:0032922","circadian regulation of gene expression",12,0,1.42,1,1,{"$nulls":9},"GO:0000478","endonucleolytic cleavage involved in rRNA processing",12,0,2.03,1,1]
["GO:0032981","mitochondrial respiratory chain complex I assembly",25,0,2.97,1,1,{"$nulls":9},"GO:0000479","endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)",11,0,1.86,1,1]
["GO:0033015","tetrapyrrole catabolic process",49,0,5.82,1,1,{"$nulls":9},"GO:0000712","resolution of meiotic recombination intermediates",11,0,1.86,1,1]
["GO:0033617","mitochondrial cytochrome c oxidase assembly",11,0,1.31,1,1,{"$nulls":9},"GO:0000727","double-strand break repair via break-induced replication",11,0,1.86,1,1]
["GO:0033962","P-body assembly",12,0,1.42,1,1,{"$nulls":9},"GO:0000731","DNA synthesis involved in DNA repair",10,0,1.7,1,1]
["GO:0034052","positive regulation of plant-type hypersensitive response",12,0,1.42,1,1,{"$nulls":9},"GO:0000963","mitochondrial RNA processing",32,0,5.42,1,1]
["GO:0034063","stress granule assembly",12,0,1.42,1,1,{"$nulls":9},"GO:0000966","RNA 5'-end processing",18,0,3.05,1,1]
["GO:0034311","diol metabolic process",13,0,1.54,1,1,{"$nulls":9},"GO:0002182","cytoplasmic translational elongation",12,0,2.03,1,1]
["GO:0034312","diol biosynthetic process",13,0,1.54,1,1,{"$nulls":9},"GO:0006222","UMP biosynthetic process",12,0,2.03,1,1]
["GO:0034389","lipid droplet organization",10,0,1.19,1,1,{"$nulls":9},"GO:0006268","DNA unwinding involved in DNA replication",13,0,2.2,1,1]
["GO:0034644","cellular response to UV",17,0,2.02,1,1,{"$nulls":9},"GO:0006270","DNA replication initiation",26,0,4.41,1,1]
["GO:0035195","miRNA-mediated gene silencing",13,0,1.54,1,1,{"$nulls":9},"GO:0006271","DNA strand elongation involved in DNA replication",15,0,2.54,1,1]
["GO:0035601","protein deacylation",12,0,1.42,1,1,{"$nulls":9},"GO:0006278","RNA-templated DNA biosynthetic process",13,0,2.2,1,1]
["GO:0036260","RNA capping",14,0,1.66,1,1,{"$nulls":9},"GO:0006301","postreplication repair",14,0,2.37,1,1]
["GO:0036297","interstrand cross-link repair",16,0,1.9,1,1,{"$nulls":9},"GO:0006388","tRNA splicing, via endonucleolytic cleavage and ligation",10,0,1.7,1,1]
["GO:0040020","regulation of meiotic nuclear division",13,0,1.54,1,1,{"$nulls":9},"GO:0006474","N-terminal protein amino acid acetylation",16,0,2.71,1,1]
["GO:0042147","retrograde transport, endosome to Golgi",28,0,3.32,1,1,{"$nulls":9},"GO:0006487","protein N-linked glycosylation",42,0,7.12,1,1]
["GO:0042181","ketone biosynthetic process",35,0,4.15,1,1,{"$nulls":9},"GO:0006490","oligosaccharide-lipid intermediate biosynthetic process",13,0,2.2,1,1]
["GO:0042371","vitamin K biosynthetic process",10,0,1.19,1,1,{"$nulls":9},"GO:0006491","N-glycan processing",10,0,1.7,1,1]
["GO:0042373","vitamin K metabolic process",10,0,1.19,1,1,{"$nulls":9},"GO:0006526","arginine biosynthetic process",13,0,2.2,1,1]
["GO:0042402","cellular biogenic amine catabolic process",10,0,1.19,1,1,{"$nulls":9},"GO:0006547","histidine metabolic process",11,0,1.86,1,1]
["GO:0042593","glucose homeostasis",23,0,2.73,1,1,{"$nulls":9},"GO:0006620","post-translational protein targeting to endoplasmic reticulum membrane",15,0,2.54,1,1]
["GO:0042753","positive regulation of circadian rhythm",11,0,1.31,1,1,{"$nulls":9},"GO:0007004","telomere maintenance via telomerase",13,0,2.2,1,1]
["GO:0043162","ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway",17,0,2.02,1,1,{"$nulls":9},"GO:0007006","mitochondrial membrane organization",26,0,4.41,1,1]
["GO:0043328","protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorti...",14,0,1.66,1,1,{"$nulls":9},"GO:0007007","inner mitochondrial membrane organization",16,0,2.71,1,1]
["GO:0043574","peroxisomal transport",19,0,2.26,1,1,{"$nulls":9},"GO:0007020","microtubule nucleation",13,0,2.2,1,1]
["GO:0043605","amide catabolic process",10,0,1.19,1,1,{"$nulls":9},"GO:0007140","male meiotic nuclear division",22,0,3.73,1,1]
["GO:0043631","RNA polyadenylation",27,0,3.21,1,1,{"$nulls":9},"GO:0008535","respiratory chain complex IV assembly",11,0,1.86,1,1]
["GO:0043633","polyadenylation-dependent RNA catabolic process",12,0,1.42,1,1,{"$nulls":9},"GO:0009089","lysine biosynthetic process via diaminopimelate",14,0,2.37,1,1]
["GO:0043634","polyadenylation-dependent ncRNA catabolic process",12,0,1.42,1,1,{"$nulls":9},"GO:0009119","ribonucleoside metabolic process",15,0,2.54,1,1]
["GO:0043649","dicarboxylic acid catabolic process",10,0,1.19,1,1,{"$nulls":9},"GO:0009129","pyrimidine nucleoside monophosphate metabolic process",17,0,2.88,1,1]
["GO:0044804","autophagy of nucleus",14,0,1.66,1,1,{"$nulls":9},"GO:0009130","pyrimidine nucleoside monophosphate biosynthetic process",16,0,2.71,1,1]
["GO:0045324","late endosome to vacuole transport",44,0,5.22,1,1,{"$nulls":9},"GO:0009173","pyrimidine ribonucleoside monophosphate metabolic process",13,0,2.2,1,1]
["GO:0045332","phospholipid translocation",12,0,1.42,1,1,{"$nulls":9},"GO:0009174","pyrimidine ribonucleoside monophosphate biosynthetic process",12,0,2.03,1,1]
["GO:0045936","negative regulation of phosphate metabolic process",14,0,1.66,1,1,{"$nulls":9},"GO:0009262","deoxyribonucleotide metabolic process",11,0,1.86,1,1]
["GO:0045995","regulation of embryonic development",13,0,1.54,1,1,{"$nulls":9},"GO:0009423","chorismate biosynthetic process",10,0,1.7,1,1]
["GO:0046113","nucleobase catabolic process",10,0,1.19,1,1,{"$nulls":9},"GO:0009682","induced systemic resistance",22,0,3.73,1,1]
["GO:0046149","pigment catabolic process",49,0,5.82,1,1,{"$nulls":9},"GO:0010022","meristem determinacy",11,0,1.86,1,1]
["GO:0046352","disaccharide catabolic process",12,0,1.42,1,1,{"$nulls":9},"GO:0010048","vernalization response",15,0,2.54,1,1]
["GO:0046512","sphingosine biosynthetic process",10,0,1.19,1,1,{"$nulls":9},"GO:0010052","guard cell differentiation",19,0,3.22,1,1]
["GO:0046520","sphingoid biosynthetic process",12,0,1.42,1,1,{"$nulls":9},"GO:0010065","primary meristem tissue development",10,0,1.7,1,1]
["GO:0046683","response to organophosphorus",10,0,1.19,1,1,{"$nulls":9},"GO:0010103","stomatal complex morphogenesis",31,0,5.25,1,1]
["GO:0046685","response to arsenic-containing substance",15,0,1.78,1,1,{"$nulls":9},"GO:0010158","abaxial cell fate specification",12,0,2.03,1,1]
["GO:0046854","phosphatidylinositol phosphate biosynthetic process",16,0,1.9,1,1,{"$nulls":9},"GO:0010262","somatic embryogenesis",15,0,2.54,1,1]
["GO:0048235","pollen sperm cell differentiation",15,0,1.78,1,1,{"$nulls":9},"GO:0010310","regulation of hydrogen peroxide metabolic process",13,0,2.2,1,1]
["GO:0048278","vesicle docking",31,0,3.68,1,1,{"$nulls":9},"GO:0010582","floral meristem determinacy",10,0,1.7,1,1]
["GO:0048441","petal development",13,0,1.54,1,1,{"$nulls":9},"GO:0010833","telomere maintenance via telomere lengthening",14,0,2.37,1,1]
["GO:0048465","corolla development",13,0,1.54,1,1,{"$nulls":9},"GO:0015780","nucleotide-sugar transmembrane transport",21,0,3.56,1,1]
["GO:0048544","recognition of pollen",38,0,4.51,1,1,{"$nulls":9},"GO:0016024","CDP-diacylglycerol biosynthetic process",14,0,2.37,1,1]
["GO:0048579","negative regulation of long-day photoperiodism, flowering",10,0,1.19,1,1,{"$nulls":9},"GO:0016129","phytosteroid biosynthetic process",13,0,2.2,1,1]
["GO:0050000","chromosome localization",10,0,1.19,1,1,{"$nulls":9},"GO:0016132","brassinosteroid biosynthetic process",13,0,2.2,1,1]
["GO:0051123","RNA polymerase II preinitiation complex assembly",11,0,1.31,1,1,{"$nulls":9},"GO:0016180","snRNA processing",16,0,2.71,1,1]
["GO:0051348","negative regulation of transferase activity",10,0,1.19,1,1,{"$nulls":9},"GO:0016444","somatic cell DNA recombination",10,0,1.7,1,1]
["GO:0051445","regulation of meiotic cell cycle",17,0,2.02,1,1,{"$nulls":9},"GO:0016553","base conversion or substitution editing",26,0,4.41,1,1]
["GO:0051452","intracellular pH reduction",10,0,1.19,1,1,{"$nulls":9},"GO:0016554","cytidine to uridine editing",21,0,3.56,1,1]
["GO:0051453","regulation of intracellular pH",28,0,3.32,1,1,{"$nulls":9},"GO:0017004","cytochrome complex assembly",15,0,2.54,1,1]
["GO:0051503","adenine nucleotide transport",18,0,2.14,1,1,{"$nulls":9},"GO:0018026","peptidyl-lysine monomethylation",10,0,1.7,1,1]
["GO:0051643","endoplasmic reticulum localization",10,0,1.19,1,1,{"$nulls":9},"GO:0022616","DNA strand elongation",15,0,2.54,1,1]
["GO:0051788","response to misfolded protein",25,0,2.97,1,1,{"$nulls":9},"GO:0030050","vesicle transport along actin filament",12,0,2.03,1,1]
["GO:0055046","microgametogenesis",33,0,3.92,1,1,{"$nulls":9},"GO:0030261","chromosome condensation",10,0,1.7,1,1]
["GO:0055070","copper ion homeostasis",14,0,1.66,1,1,{"$nulls":9},"GO:0030488","tRNA methylation",28,0,4.75,1,1]
["GO:0055075","potassium ion homeostasis",16,0,1.9,1,1,{"$nulls":9},"GO:0030490","maturation of SSU-rRNA",52,0,8.81,1,1]
["GO:0060147","regulation of post-transcriptional gene silencing",17,0,2.02,1,1,{"$nulls":9},"GO:0031110","regulation of microtubule polymerization or depolymerization",13,0,2.2,1,1]
["GO:0060236","regulation of mitotic spindle organization",11,0,1.31,1,1,{"$nulls":9},"GO:0031145","anaphase-promoting complex-dependent catabolic process",13,0,2.2,1,1]
["GO:0060321","acceptance of pollen",12,0,1.42,1,1,{"$nulls":9},"GO:0031400","negative regulation of protein modification process",22,0,3.73,1,1]
["GO:0060627","regulation of vesicle-mediated transport",22,0,2.61,1,1,{"$nulls":9},"GO:0032042","mitochondrial DNA metabolic process",11,0,1.86,1,1]
["GO:0060966","regulation of gene silencing by RNA",21,0,2.49,1,1,{"$nulls":9},"GO:0032365","intracellular lipid transport",13,0,2.2,1,1]
["GO:0061726","mitochondrion disassembly",18,0,2.14,1,1,{"$nulls":9},"GO:0032392","DNA geometric change",25,0,4.24,1,1]
["GO:0061817","endoplasmic reticulum-plasma membrane tethering",10,0,1.19,1,1,{"$nulls":9},"GO:0032508","DNA duplex unwinding",25,0,4.24,1,1]
["GO:0061919","process utilizing autophagic mechanism",82,0,9.73,1,1,{"$nulls":9},"GO:0032776","DNA methylation on cytosine",14,0,2.37,1,1]
["GO:0071029","nuclear ncRNA surveillance",12,0,1.42,1,1,{"$nulls":9},"GO:0032880","regulation of protein localization",23,0,3.9,1,1]
["GO:0071035","nuclear polyadenylation-dependent rRNA catabolic process",12,0,1.42,1,1,{"$nulls":9},"GO:0032886","regulation of microtubule-based process",28,0,4.75,1,1]
["GO:0071038","nuclear polyadenylation-dependent tRNA catabolic process",10,0,1.19,1,1,{"$nulls":9},"GO:0033157","regulation of intracellular protein transport",10,0,1.7,1,1]
["GO:0071046","nuclear polyadenylation-dependent ncRNA catabolic process",12,0,1.42,1,1,{"$nulls":9},"GO:0033617","mitochondrial cytochrome c oxidase assembly",11,0,1.86,1,1]
["GO:0071218","cellular response to misfolded protein",22,0,2.61,1,1,{"$nulls":9},"GO:0034314","Arp2/3 complex-mediated actin nucleation",13,0,2.2,1,1]
["GO:0071219","cellular response to molecule of bacterial origin",11,0,1.31,1,1,{"$nulls":9},"GO:0034472","snRNA 3'-end processing",14,0,2.37,1,1]
["GO:0071248","cellular response to metal ion",16,0,1.9,1,1,{"$nulls":9},"GO:0034475","U4 snRNA 3'-end processing",10,0,1.7,1,1]
["GO:0071333","cellular response to glucose stimulus",18,0,2.14,1,1,{"$nulls":9},"GO:0034508","centromere complex assembly",11,0,1.86,1,1]
["GO:0071450","cellular response to oxygen radical",12,0,1.42,1,1,{"$nulls":9},"GO:0036260","RNA capping",14,0,2.37,1,1]
["GO:0071451","cellular response to superoxide",12,0,1.42,1,1,{"$nulls":9},"GO:0036297","interstrand cross-link repair",16,0,2.71,1,1]
["GO:0071586","CAAX-box protein processing",10,0,1.19,1,1,{"$nulls":9},"GO:0042147","retrograde transport, endosome to Golgi",28,0,4.75,1,1]
["GO:0071712","ER-associated misfolded protein catabolic process",16,0,1.9,1,1,{"$nulls":9},"GO:0042278","purine nucleoside metabolic process",13,0,2.2,1,1]
["GO:0071985","multivesicular body sorting pathway",33,0,3.92,1,1,{"$nulls":9},"GO:0042761","very long-chain fatty acid biosynthetic process",18,0,3.05,1,1]
["GO:0072530","purine-containing compound transmembrane transport",12,0,1.42,1,1,{"$nulls":9},"GO:0043086","negative regulation of catalytic activity",33,0,5.59,1,1]
["GO:0072583","clathrin-dependent endocytosis",26,0,3.09,1,1,{"$nulls":9},"GO:0043101","purine-containing compound salvage",10,0,1.7,1,1]
["GO:0072662","protein localization to peroxisome",17,0,2.02,1,1,{"$nulls":9},"GO:0043173","nucleotide salvage",17,0,2.88,1,1]
["GO:0072663","establishment of protein localization to peroxisome",17,0,2.02,1,1,{"$nulls":9},"GO:0045005","DNA-templated DNA replication maintenance of fidelity",11,0,1.86,1,1]
["GO:0072665","protein localization to vacuole",51,0,6.05,1,1,{"$nulls":9},"GO:0045010","actin nucleation",27,0,4.58,1,1]
["GO:0072666","establishment of protein localization to vacuole",51,0,6.05,1,1,{"$nulls":9},"GO:0045039","protein insertion into mitochondrial inner membrane",14,0,2.37,1,1]
["GO:0080112","seed growth",14,0,1.66,1,1,{"$nulls":9},"GO:0045492","xylan biosynthetic process",24,0,4.07,1,1]
["GO:0080113","regulation of seed growth",12,0,1.42,1,1,{"$nulls":9},"GO:0046049","UMP metabolic process",12,0,2.03,1,1]
["GO:0080120","CAAX-box protein maturation",10,0,1.19,1,1,{"$nulls":9},"GO:0046128","purine ribonucleoside metabolic process",11,0,1.86,1,1]
["GO:0080142","regulation of salicylic acid biosynthetic process",12,0,1.42,1,1,{"$nulls":9},"GO:0046341","CDP-diacylglycerol metabolic process",14,0,2.37,1,1]
["GO:0090174","organelle membrane fusion",48,0,5.7,1,1,{"$nulls":9},"GO:0046417","chorismate metabolic process",14,0,2.37,1,1]
["GO:0090224","regulation of spindle organization",11,0,1.31,1,1,{"$nulls":9},"GO:0046451","diaminopimelate metabolic process",14,0,2.37,1,1]
["GO:0090307","mitotic spindle assembly",17,0,2.02,1,1,{"$nulls":9},"GO:0046654","tetrahydrofolate biosynthetic process",11,0,1.86,1,1]
["GO:0097354","prenylation",11,0,1.31,1,1,{"$nulls":9},"GO:0048363","mucilage pectin metabolic process",11,0,1.86,1,1]
["GO:0097501","stress response to metal ion",14,0,1.66,1,1,{"$nulls":9},"GO:0048441","petal development",13,0,2.2,1,1]
["GO:0098659","inorganic cation import across plasma membrane",19,0,2.26,1,1,{"$nulls":9},"GO:0048465","corolla development",13,0,2.2,1,1]
["GO:0098732","macromolecule deacylation",12,0,1.42,1,1,{"$nulls":9},"GO:0050000","chromosome localization",10,0,1.7,1,1]
["GO:0098869","cellular oxidant detoxification",26,0,3.09,1,1,{"$nulls":9},"GO:0051026","chiasma assembly",14,0,2.37,1,1]
["GO:0099515","actin filament-based transport",16,0,1.9,1,1,{"$nulls":9},"GO:0051204","protein insertion into mitochondrial membrane",19,0,3.22,1,1]
["GO:0099518","vesicle cytoskeletal trafficking",13,0,1.54,1,1,{"$nulls":9},"GO:0051211","anisotropic cell growth",10,0,1.7,1,1]
["GO:0099587","inorganic ion import across plasma membrane",20,0,2.37,1,1,{"$nulls":9},"GO:0051223","regulation of protein transport",15,0,2.54,1,1]
["GO:0106354","tRNA surveillance",10,0,1.19,1,1,{"$nulls":9},"GO:0051348","negative regulation of transferase activity",10,0,1.7,1,1]
["GO:0110154","RNA decapping",13,0,1.54,1,1,{"$nulls":9},"GO:0051438","regulation of ubiquitin-protein transferase activity",10,0,1.7,1,1]
["GO:0110156","methylguanosine-cap decapping",12,0,1.42,1,1,{"$nulls":9},"GO:0051495","positive regulation of cytoskeleton organization",10,0,1.7,1,1]
["GO:0140029","exocytic process",13,0,1.54,1,1,{"$nulls":9},"GO:0051568","histone H3-K4 methylation",10,0,1.7,1,1]
["GO:0140056","organelle localization by membrane tethering",42,0,4.99,1,1,{"$nulls":9},"GO:0052325","cell wall pectin biosynthetic process",16,0,2.71,1,1]
["GO:0140547","acquisition of seed longevity",10,0,1.19,1,1,{"$nulls":9},"GO:0060236","regulation of mitotic spindle organization",11,0,1.86,1,1]
["GO:1900368","regulation of post-transcriptional gene silencing by RNA",10,0,1.19,1,1,{"$nulls":9},"GO:0070201","regulation of establishment of protein localization",15,0,2.54,1,1]
["GO:1901661","quinone metabolic process",34,0,4.04,1,1,{"$nulls":9},"GO:0070507","regulation of microtubule cytoskeleton organization",28,0,4.75,1,1]
["GO:1901663","quinone biosynthetic process",34,0,4.04,1,1,{"$nulls":9},"GO:0071103","DNA conformation change",34,0,5.76,1,1]
["GO:1901679","nucleotide transmembrane transport",13,0,1.54,1,1,{"$nulls":9},"GO:0071897","DNA biosynthetic process",29,0,4.92,1,1]
["GO:1901703","protein localization involved in auxin polar transport",14,0,1.66,1,1,{"$nulls":9},"GO:0090151","establishment of protein localization to mitochondrial membrane",22,0,3.73,1,1]
["GO:1902115","regulation of organelle assembly",12,0,1.42,1,1,{"$nulls":9},"GO:0090224","regulation of spindle organization",11,0,1.86,1,1]
["GO:1902456","regulation of stomatal opening",15,0,1.78,1,1,{"$nulls":9},"GO:0090307","mitotic spindle assembly",17,0,2.88,1,1]
["GO:1903426","regulation of reactive oxygen species biosynthetic process",15,0,1.78,1,1,{"$nulls":9},"GO:0090481","pyrimidine nucleotide-sugar transmembrane transport",16,0,2.71,1,1]
["GO:1903509","liposaccharide metabolic process",53,0,6.29,1,1,{"$nulls":9},"GO:0090502","RNA phosphodiester bond hydrolysis, endonucleolytic",18,0,3.05,1,1]
["GO:1904276","regulation of wax biosynthetic process",10,0,1.19,1,1,{"$nulls":9},"GO:0090615","mitochondrial mRNA processing",13,0,2.2,1,1]
["GO:1905037","autophagosome organization",32,0,3.8,1,1,{"$nulls":9},"GO:0099518","vesicle cytoskeletal trafficking",13,0,2.2,1,1]
["GO:1990066","energy quenching",16,0,1.9,1,1,{"$nulls":9},"GO:1900865","chloroplast RNA modification",16,0,2.71,1,1]
["GO:1990069","stomatal opening",19,0,2.26,1,1,{"$nulls":9},"GO:1902115","regulation of organelle assembly",12,0,2.03,1,1]
["GO:1990573","potassium ion import across plasma membrane",10,0,1.19,1,1,{"$nulls":9},"GO:1902905","positive regulation of supramolecular fiber organization",10,0,1.7,1,1]
["GO:2000142","regulation of DNA-templated transcription initiation",12,0,1.42,1,1,{"$nulls":9},"GO:1904029","regulation of cyclin-dependent protein kinase activity",42,0,7.12,1,1]
["GO:2000379","positive regulation of reactive oxygen species metabolic process",10,0,1.19,1,1,{"$nulls":9},"GO:2001289","lipid X metabolic process",10,0,1.7,1,1]

{"sheet":"Supplemental Data Set 4","index":4,"n_rows":16246,"n_cols":5,"rows_kept":16246}
["Supplemental Data Set 4. Genes belonging to 17 modules created with WGCNA."]
[]
["gene_id","moduleColor","Gene Model Description","Primary Gene Symbol","All Gene Symbols"]
["AT4G12460","black","OSBP(oxysterol binding protein)-related protein 2B;(source:Araport11)"]
["AT4G36945","black","PLC-like phosphodiesterases superfamily protein;(source:Araport11)"]
["AT3G05400","black","Major facilitator superfamily protein;(source:Araport11)"]
["AT3G57450","black","hypothetical protein;(source:Araport11)"]
["AT2G19830","black","SNF7 family protein;(source:Araport11)"]
["AT5G01090","black","Concanavalin A-like lectin family protein;(source:Araport11)"]
["AT1G12120","black","hypothetical protein (DUF863);(source:Araport11)"]
["AT3G17950","black","transmembrane protein;(source:Araport11)"]
["AT3G47070","black","thylakoid soluble phosphoprotein;(source:Araport11)"]
["AT3G14200","black","Chaperone DnaJ-domain superfamily protein;(source:Araport11)"]
["AT3G10980","black","PLAC8 family protein;(source:Araport11)"]
["AT3G48570","black","secE/sec61-gamma protein transport protein;(source:Araport11)"]
["AT2G31710","black","Vacuolar ATPase assembly integral membrane protein VMA21-like domain-containing protein;(source:Araport11)"]
["AT1G34270","black","Exostosin family protein;(source:Araport11)"]
["AT1G71970","black","hypothetical protein;(source:Araport11)"]
["AT4G33910","black","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT4G36750","black","Quinone reductase family protein;(source:Araport11)"]
["AT4G33130","black","rho GTPase-activating protein;(source:Araport11)"]
["AT2G42365","black","Natural antisense transcript overlaps with AT2G42360 and AT2G42370;(source:Araport11)"]
["AT2G27810","black","Encodes a plasma-membrane localized nucleobase transporter capable of transporting adenine, guanine, uracil and hypoxanthine. Likely to be a proton-nucleobase symporter."]
["AT3G22970","black","DUF506 gene family member"]
["AT3G24530","black","AAA-type ATPase family protein / ankyrin repeat family protein;(source:Araport11)"]
["AT2G27060","black","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT1G54460","black","TPX2 (targeting protein for Xklp2) protein family;(source:Araport11)"]
["AT1G11880","black","transferases, transferring hexosyl groups;(source:Araport11)"]
["AT5G38360","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT5G47060","black","hypothetical protein (DUF581);(source:Araport11)"]
["AT4G30820","black","cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-like protein;(source:Araport11)"]
["AT2G45300","black","encodes 3-phosphoshikimate 1-carboxyvinyltransferase / 5-enolpyruvylshikimate-3-phosphate / EPSP synthase involved in chorismate biosynthesis The mRNA is cell-to-cell mobile."]
["AT3G03770","black","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT2G24395","black","chaperone protein dnaJ-like protein;(source:Araport11)"]
["AT2G29510","black","hypothetical protein (DUF3527);(source:Araport11)"]
["AT2G37650","black","GRAS family transcription factor;(source:Araport11)"]
["AT2G46580","black","Pyridoxamine 5-phosphate oxidase family protein;(source:Araport11)"]
["AT3G27340","black","Myb domain protein;(source:Araport11)"]
["AT5G57000","black","DEAD-box ATP-dependent RNA helicase;(source:Araport11)"]
["AT5G26770","black","NEAP2 is a member of a small family containing coiled-coil domains, a nuclear localization signal and a C-terminal predicted transmembrane domain. It localizes to the nuclear periphery. Mutants have altered nuclear morphology and chromatin structure."]
["AT5G61910","black","DCD (Development and Cell Death) domain protein;(source:Araport11)"]
["AT5G66330","black","Leucine-rich repeat (LRR) family protein;(source:Araport11)"]
["AT2G04110","black","pseudogene of expressed protein;(source:Araport11)"]
["AT4G38670","black","Pathogenesis-related thaumatin superfamily protein;(source:Araport11)"]
["AT5G47310","black","PPPDE putative thiol peptidase family protein;(source:Araport11)"]
["AT1G67060","black","peptidase M50B-like protein;(source:Araport11)"]
["AT1G29700","black","Metallo-hydrolase/oxidoreductase superfamily protein;(source:Araport11)"]
["AT4G18810","black","CIA30-type domain protein, located in chloroplast, expressed during early development."]
["AT1G18440","black","Peptidyl-tRNA hydrolase family protein;(source:Araport11)"]
["AT5G48520","black","Encodes AUGMIN subunit3 (AUG3), a homolog of animal dim gamma-tubulin 3/human augmin-like complex, subunit 3. Plays a critical role in microtubule organization during plant cell division."]
["AT3G05050","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G62680","black","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G13190","black","Encodes a plasma membrane localized LITAF domain protein that interacts with LSD1 and acts as a negative regulation of hypersensitive cell death."]
["AT5G16010","black","3-oxo-5-alpha-steroid 4-dehydrogenase family protein;(source:Araport11)"]
["AT4G18820","black","AAA-type ATPase family protein;(source:Araport11)"]
["AT5G42620","black","metalloendopeptidase / zinc ion binding protein;(source:Araport11)"]
["AT1G21830","black","hypothetical protein;(source:Araport11)"]
["AT5G46850","black","phosphatidylinositol-glycan biosynthesis class X-like protein;(source:Araport11)"]
["AT4G24790","black","AAA-type ATPase family protein;(source:Araport11)"]
["AT5G58990","black","28S ribosomal S34 protein;(source:Araport11)"]
["AT1G04290","black","Thioesterase superfamily protein;(source:Araport11)"]
["AT5G24430","black","Calcium-dependent protein kinase (CDPK) family protein;(source:Araport11)"]
["AT1G06550","black","ATP-dependent caseinolytic (Clp) protease/crotonase family protein;(source:Araport11)"]
["AT4G23885","black","hypothetical protein;(source:Araport11)"]
["AT5G48480","black","Lactoylglutathione lyase / glyoxalase I family protein;(source:Araport11)"]
["AT1G07380","black","Encodes a neutral ceramidase that is involved in sphingolipid homeostasis and responses to oxidative stress."]
["AT5G59350","black","transmembrane protein;(source:Araport11)"]
["AT5G51840","black","junctophilin-like protein;(source:Araport11)"]
["AT1G22170","black","Phosphoglycerate mutase family protein;(source:Araport11)"]
["AT1G05720","black","selenoprotein family protein;(source:Araport11)"]
["AT4G01330","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G03440","black","Leucine-rich repeat (LRR) family protein;(source:Araport11)"]
["AT1G67880","black","beta-1,4-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT4G13345","black","Serinc-domain containing serine and sphingolipid biosynthesis protein;(source:Araport11)"]
["AT4G26470","black","Calcium-binding EF-hand family protein;(source:Araport11)"]
["AT3G07470","black","DUF538 protein"]
["AT4G22580","black","Exostosin family protein;(source:Araport11)"]
["AT4G02370","black","DUF538 domain protein , tandemly repeated with AT4G02360 (ASD3). Expression is induced by ABA and promoter contains ABA response elements."]
["AT1G70900","black","hypothetical protein;(source:Araport11)"]
["AT5G18475","black","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G45010","black","PLAC8 family protein;(source:Araport11)"]
["AT5G01800","black","saposin B domain-containing protein;(source:Araport11)"]
["AT1G21090","black","Cupredoxin superfamily protein;(source:Araport11)"]
["AT4G01270","black","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G14210","black","Ribonuclease T2 family protein;(source:Araport11)"]
["AT2G14255","black","Ankyrin repeat family protein with DHHC zinc finger domain-containing protein;(source:Araport11)"]
["AT3G50780","black","BTB/POZ domain protein;(source:Araport11)"]
["AT2G25605","black","DNA-directed RNA polymerase subunit beta;(source:Araport11)"]
["AT4G25280","black","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT3G52920","black","transcriptional activator (DUF662);(source:Araport11)"]
["AT2G38780","black","cytochrome C oxidase subunit;(source:Araport11)"]
["AT2G44210","black","carboxyl-terminal peptidase (DUF239);(source:Araport11)"]
["AT4G32790","black","Exostosin family protein;(source:Araport11)"]
["AT2G43535","black","Encodes a defensin-like (DEFL) family protein."]
["AT1G63290","black","Aldolase-type TIM barrel family protein;(source:Araport11)"]
["AT5G10820","black","Major facilitator superfamily protein;(source:Araport11)"]
["AT3G15710","black","Peptidase S24/S26A/S26B/S26C family protein;(source:Araport11)"]
["AT1G64450","black","Glycine-rich protein family;(source:Araport11)"]
["AT5G10830","black","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT3G02900","black","Low-density receptor-like protein;(source:Araport11)"]
["AT2G16460","black","coiled-coil 90B-like protein (DUF1640);(source:Araport11)"]
["AT5G50370","black","Adenylate kinase family protein;(source:Araport11)"]
["AT4G25070","black","caldesmon-like protein;(source:Araport11)"]
["AT1G78210","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT2G46910","black","PAP/fibrillin (ECM1) located in chloroplast."]
["AT1G65010","black","Encodes a microtubule-associated protein. Putative role in flower development. Comparison of SALK_061426C to Columbia wild type in normal lighting and under low light of 33 micromoles per meter-squared per second resulted in a trend toward earlier bolting in the mutant under low light (P=0.055) (Ann Stapleton and Patrick Pridgen, 2009, personal communication)."]
["AT4G17020","black","transcription factor-like protein;(source:Araport11)"]
["AT2G25130","black","ARM repeat superfamily protein;(source:Araport11)"]
["AT1G21560","black","hypothetical protein;(source:Araport11)"]
["AT1G06640","black","encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase The mRNA is cell-to-cell mobile."]
["AT4G08035","black","other_RNA;(source:Araport11)"]
["AT4G30490","black","AFG1-like ATPase family protein;(source:Araport11)"]
["AT1G80870","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT4G10730","black","Protein kinase superfamily protein"]
["AT4G27370","black","member of Myosin-like proteins"]
["AT4G16490","black","ARM-repeat protein which interacts with Feronia; likely involved in FER-mediated intracellular signaling pathways that are essential in plant growth and development, and possibly plant immunity."]
["AT1G77145","black","DUF506 gene family member"]
["AT3G19000","black","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT5G60570","black","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT4G04200","black","Microsomal signal peptidase 25 kDa subunit (SPC25);(source:Araport11)"]
["AT5G35970","black","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT1G64980","black","Encodes a putative nucleotide-diphospho-sugar transferase required for pollen germination and tube growth."]
["AT1G67720","black","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT5G41140","black","Myosin heavy chain-related protein;(source:Araport11)"]
["AT1G14310","black","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)"]
["AT2G14110","black","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)"]
["AT2G25520","black","Drug/metabolite transporter superfamily protein;(source:Araport11)"]
["AT3G59300","black","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G54780","black","Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11)"]
["AT5G19500","black","Encodes a putative amino acid transporter that localizes to the chloroplast inner envelope membrane."]
["AT1G62250","black","Increased tendency to retain introns in smeb mutants under normal or chilling stress condition."]
["AT2G14090","black","pseudogene of F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT5G25820","black","Exostosin family protein;(source:Araport11)"]
["AT2G16250","black","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT5G20700","black","senescence-associated family protein, putative (DUF581);(source:Araport11)"]
["AT3G26290","black","putative cytochrome P450"]
["AT5G07590","black","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT3G61590","black","F-box protein that is involved in some aspect of regulation of gene silencing by miRNA. Loss of function mutations have increased levels of some miRNAs. Its activity depends on the presence of functional F-box."]
["AT1G54610","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT4G32970","black","BRISC/BRCA1-A complex protein;(source:Araport11)"]
["AT3G56360","black","hypothetical protein;(source:Araport11)"]
["AT2G30105","black","LRR/ubiquitin-like domain protein;(source:Araport11)"]
["AT5G57920","black","early nodulin-like protein 10;(source:Araport11)"]
["AT3G03660","black","Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box."]
["AT3G21465","black","adenylyl cyclase;(source:Araport11)"]
["AT1G31300","black","TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein;(source:Araport11)"]
["AT1G53040","black","tRNA (met) cytidine acetyltransferase, putative (DUF616);(source:Araport11)"]
["AT5G56890","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT5G60430","black","antiporter/ drug transporter;(source:Araport11)"]
["AT5G52540","black","keratin-associated protein, putative (DUF819);(source:Araport11)"]
["AT2G37160","black","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT5G10160","black","Thioesterase superfamily protein;(source:Araport11)"]
["AT5G07140","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT4G34490","black","CYCLASE ASSOCIATED PROTEIN"]
["AT1G11200","black","organic solute transporter ostalpha protein (DUF300);(source:Araport11)"]
["AT2G17540","black","hypothetical protein;(source:Araport11)"]
["AT3G60810","black","DUF1499 family protein;(source:Araport11)"]
["AT2G14835","black","RING/U-box superfamily protein;(source:Araport11)"]
["AT5G55610","black","isopentenyl-diphosphate delta-isomerase;(source:Araport11)"]
["AT3G44380","black","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11)"]
["AT1G26930","black","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT5G44720","black","Molybdenum cofactor sulfurase family protein;(source:Araport11)"]
["AT4G01897","black","dihydroorotate dehydrogenase;(source:Araport11)"]
["AT3G27470","black","lysine ketoglutarate reductase trans-splicing protein (DUF707);(source:Araport11)"]
["AT3G47290","black","phosphatidylinositol-speciwc phospholipase C8;(source:Araport11)"]
["AT5G37010","black","rho GTPase-activating protein;(source:Araport11)"]
["AT1G53770","black","O-fucosyltransferase family protein;(source:Araport11)"]
["AT3G49730","black","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G61040","black","hypothetical protein;(source:Araport11)"]
["AT2G30270","black","LURP-one-like protein (DUF567);(source:Araport11)"]
["AT1G43886","black","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 5.3e-165 P-value blast match to GB:AAA57005 Hopscotch polyprotein (Ty1_Copia-element) (Zea mays);(source:TAIR10)"]
["AT3G01430","black","NHL domain protein;(source:Araport11)"]
["AT2G28320","black","Pleckstrin homology (PH) and lipid-binding START domains-containing protein;(source:Araport11)"]
["AT1G73930","black","polarity axis stabilization protein;(source:Araport11)"]
["AT4G09520","black","Cofactor-independent phosphoglycerate mutase;(source:Araport11)"]
["AT3G07690","black","6-phosphogluconate dehydrogenase family protein;(source:Araport11)"]
["AT4G05160","black","Encodes a peroxisomal protein involved in the activation of fatty acids through esterification with CoA. At4g05160 preferentially activates fatty acids with medium chain length (C6:0 and C7:0) as well as even-numbered long-chain fatty acids (C14:0, C16:0 and C18:0). At4g05160 was also able to catalyze the conversion of OPC-6:0 to its CoA ester and is therefore thought to be involved in the peroxisomal &#946;-oxidation steps of jasmonic acid biosynthesis."]
["AT1G16170","black","ephrin-A3 protein;(source:Araport11)"]
["AT2G18910","black","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT4G21450","black","PapD-like superfamily protein;(source:Araport11)"]
["AT2G24170","black","Endomembrane protein 70 protein family;(source:Araport11)"]
["AT3G45400","black","exostosin family protein;(source:Araport11)"]
["AT5G66050","black","Wound-responsive family protein;(source:Araport11)"]
["AT4G08240","black","histone-lysine N-methyltransferase;(source:Araport11)"]
["AT2G35840","black","Sucrose-6F-phosphate phosphohydrolase family protein;(source:Araport11)"]
["AT1G11280","black","S-locus lectin protein kinase family protein;(source:Araport11)"]
["AT5G08580","black","Calcium-binding EF hand family protein;(source:Araport11)"]
["AT2G15320","black","Leucine-rich repeat (LRR) family protein;(source:Araport11)"]
["AT5G01850","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G79070","black","SNARE-associated protein-like protein;(source:Araport11)"]
["AT3G07400","black","lipase class 3 family protein;(source:Araport11)"]
["AT5G60210","black","Encodes RIP5 (ROP interactive partner 5), a putative Rho protein effector, interacting specifically with the active form of ROPs (Rho proteins of plants)."]
["AT2G37975","black","Yos1-like protein;(source:Araport11)"]
["AT5G12260","black","transferring glycosyl group transferase;(source:Araport11)"]
["AT5G57250","black","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT4G31248","black","Natural antisense transcript overlaps with AT4G31250;(source:Araport11)"]
["AT1G22060","black","sporulation-specific protein;(source:Araport11)"]
["AT1G32190","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT2G43070","black","SIGNAL PEPTIDE PEPTIDASE-LIKE 3;(source:Araport11)"]
["AT5G38460","black","ALG6, ALG8 glycosyltransferase family;(source:Araport11)"]
["AT4G14840","black","spindle assembly abnormal protein;(source:Araport11)"]
["AT3G13845","black","transmembrane protein;(source:Araport11)"]
["AT1G66530","black","Arginyl-tRNA synthetase, class Ic;(source:Araport11)"]
["AT5G65450","black","Encodes a ubiquitin-specific protease.The mRNA is cell-to-cell mobile."]
["AT4G24630","black","DHHC-type zinc finger family protein;(source:Araport11)"]
["AT1G78730","black","FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein;(source:Araport11)"]
["AT3G09190","black","Regulates flowering time in Ws ecotype."]
["AT2G36360","black","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT1G35780","black","N-lysine methyltransferase;(source:Araport11)"]
["AT5G35753","black","DnaJ heat shock amino-terminal domain protein (DUF3444);(source:Araport11)"]
["AT5G22050","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT4G39170","black","Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11)"]
["AT1G55265","black","DUF538 family protein, putative (Protein of unknown function, DUF538);(source:Araport11)"]
["AT1G09980","black","Putative serine esterase family protein;(source:Araport11)"]
["AT5G61830","black","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT1G68400","black","leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11)"]
["AT3G60290","black","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT5G39450","black","F-box family protein;(source:Araport11)"]
["AT2G41440","black","agamous-like MADS-box protein;(source:Araport11)"]
["AT2G05810","black","ARM repeat superfamily protein;(source:Araport11)"]
["AT1G33330","black","Class I peptide chain release factor;(source:Araport11)"]
["AT1G04340","black","HR-like lesion-inducing protein-like protein;(source:Araport11)"]
["AT5G65880","black","transmembrane protein;(source:Araport11)"]
["AT4G17070","black","peptidyl-prolyl cis-trans isomerase;(source:Araport11)"]
["AT2G03505","black","Carbohydrate-binding X8 domain superfamily protein;(source:Araport11)"]
["AT3G58820","black","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT2G24230","black","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT5G27430","black","Signal peptidase subunit;(source:Araport11)"]
["AT2G31902","black","Natural antisense transcript overlaps with AT2G31900;(source:Araport11)"]
["AT1G12700","black","Encodes RNA PROCESSING FACTOR 1 (RPF1), a pentatricopeptide repeat (PPR) protein of the P-class containing canonical PPR-repeats. RPF1 is required for the 5?-end processing of the nad4 mRNA in mitochondria. Ler and other accessions impaired in processing of the nad4 mRNA 5&#8242;-end, contain a single nucleotide polymorphism (SNP) 807 nucleotides downstream of the predicted translation start codon (G807A). The resulting premature translation termination codon abolishes the function of the RPF1 gene in Ler."]
["AT1G71695","black","Peroxidase superfamily protein;(source:Araport11)"]
["AT5G14550","black","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT4G15790","black","uveal autoantigen with coiled-coil/ankyrin;(source:Araport11)"]
["AT5G18490","black","vacuolar sorting-associated protein (DUF946);(source:Araport11)"]
["AT1G12845","black","transmembrane protein;(source:Araport11)"]
["AT4G17790","black","SNARE associated Golgi protein family;(source:Araport11)"]
["AT2G24580","black","FAD-dependent oxidoreductase family protein;(source:Araport11)"]
["AT3G17120","black","transmembrane protein;(source:Araport11)"]
["AT1G09160","black","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT3G12590","black","hypothetical protein;(source:Araport11)"]
["AT2G40980","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G71810","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT3G07080","black","EamA-like transporter family;(source:Araport11)"]
["AT2G05300","black","pseudogene of the F-box protein family"]
["AT5G03440","black","zinc finger protein;(source:Araport11)"]
["AT2G27360","black","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates."]
["AT1G23205","black","Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11)"]
["AT1G73650","black","3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295);(source:Araport11)"]
["AT4G22730","black","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT4G22190","black","serine/arginine repetitive matrix-like protein;(source:Araport11)"]
["AT1G79030","black","Chaperone DnaJ-domain superfamily protein;(source:Araport11)"]
["AT4G34500","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G19990","black","nucleolin;(source:Araport11)"]
["AT1G22110","black","structural constituent of ribosome;(source:Araport11)"]
["AT1G62200","black","Major facilitator superfamily protein;(source:Araport11)"]
["AT1G50740","black","Transmembrane proteins 14C;(source:Araport11)"]
["AT1G10720","black","BSD domain-containing protein;(source:Araport11)"]
["AT3G55850","black","Encodes a product that might regulate nucleo-cytoplasmic trafficking of an intermediate(s) involved in phyA signal transduction. Differs from isoform 2 only in the first few N-terminal amino acids."]
["AT3G48330","black","Encodes protein-L-isoaspartate methyltransferase. Important for maintaining viability as the seed ages. Involved in germination."]
["AT4G14930","black","Survival protein SurE-like phosphatase/nucleotidase;(source:Araport11)"]
["AT1G63420","black","O-glucosyltransferase-like protein (DUF821);(source:Araport11)"]
["AT5G61970","black","signal recognition particle-related / SRP-like protein;(source:Araport11)"]
["AT5G66310","black","ATP binding microtubule motor family protein;(source:Araport11)"]
["AT1G67040","black","DnaA initiator-associating protein;(source:Araport11)"]
["AT1G15970","black","DNA glycosylase superfamily protein;(source:Araport11)"]
["AT1G22430","black","GroES-like zinc-binding dehydrogenase family protein;(source:Araport11)"]
["AT3G58930","black","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT3G50230","black","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT3G26935","black","DHHC-type zinc finger family protein;(source:Araport11)"]
["AT1G75170","black","Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11)"]
["AT1G60525","black","Natural antisense transcript overlaps with AT1G60530;(source:Araport11)"]
["AT2G30710","black","Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11)"]
["AT1G54120","black","hypothetical protein;(source:Araport11)"]
["AT2G25250","black","serine/arginine repetitive matrix-like protein;(source:Araport11)"]
["AT3G61220","black","CytADR/SDR1 is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. It can also act on menthone and neomenthol in vitro, but these do not represent likely endogenous activities of this enzyme in planta. GFP-tagged CytADR appears to localize to the cytosol where it likely plays a role in detoxifying reactive carbonyls. sdr1 mutants have altered responses to pathogens.The mRNA is cell-to-cell mobile."]
["AT5G06050","black","Putative methyltransferase family protein;(source:Araport11)"]
["AT1G31150","black","K-box region protein (DUF1985);(source:Araport11)"]
["AT5G53750","black","CBS domain-containing protein;(source:Araport11)"]
["AT1G75210","black","HAD-superfamily hydrolase, subfamily IG, 5-nucleotidase;(source:Araport11)"]
["AT2G32560","black","F-box family protein;(source:Araport11)"]
["AT1G48315","black","Natural antisense transcript overlaps with AT1G48320;(source:Araport11)"]
["AT2G05755","black","Nucleotide/sugar transporter family protein"]
["AT5G06845","black","None;(source:Araport11)"]
["AT2G42230","black","C-CAP/cofactor C-like domain-containing protein;(source:Araport11)"]
["AT2G22425","black","Microsomal signal peptidase 12 kDa subunit (SPC12);(source:Araport11)"]
["AT2G25190","black","PPPDE putative thiol peptidase family protein;(source:Araport11)"]
["AT4G17486","black","PPPDE putative thiol peptidase family protein;(source:Araport11)"]
["AT1G02475","black","Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11)"]
["AT1G09580","black","emp24/gp25L/p24 family/GOLD family protein;(source:Araport11)"]
["AT5G45020","black","Glutathione S-transferase family protein;(source:Araport11)"]
["AT1G79640","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G35510","black","O-fucosyltransferase family protein;(source:Araport11)"]
["AT3G06868","black","vitellogenin-like protein;(source:Araport11)"]
["AT2G29660","black","zinc finger (C2H2 type) family protein;(source:Araport11)"]
["AT3G52905","black","Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11)"]
["AT1G36280","black","L-Aspartase-like family protein;(source:Araport11)"]
["AT3G19680","black","hypothetical protein (DUF1005);(source:Araport11)"]
["AT1G71480","black","Chloroplast protein involved in nuclear transport (ECM1)."]
["AT3G01810","black","EEIG1/EHBP1 protein amino-terminal domain protein;(source:Araport11)"]
["AT1G30440","black","Phototropic-responsive NPH3 family protein;(source:Araport11)"]
["AT3G28760","black","3-dehydroquinate synthase;(source:Araport11)"]
["AT2G23700","black","Itga6 (Protein of unknown function, DUF547);(source:Araport11)"]
["AT4G37080","black","ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function, DUF547);(source:Araport11)"]
["AT3G10200","black","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT2G25050","black","actin-binding FH2 (formin 2) family protein;(source:Araport11)"]
["AT3G56760","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT3G44190","black","FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11)"]
["AT1G72800","black","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT1G76270","black","O-fucosyltransferase family protein;(source:Araport11)"]
["AT4G19420","black","Pectinacetylesterase family protein;(source:Araport11)"]
["AT3G63240","black","DNAse I-like superfamily protein;(source:Araport11)"]
["AT5G45170","black","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)"]
["AT3G17940","black","Galactose mutarotase-like superfamily protein;(source:Araport11)"]
["AT1G50440","black","RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11)"]
["AT2G07680","black","Encodes ABCC13/MRP11, a member of the multidrug resistance associated protein MRP/ABCC subfamily. Its expression is induced by gibberellic acid and downregulated by naphthalene acetic acid, abscisic acid, and zeatin."]
["AT1G26730","black","EXS (ERD1/XPR1/SYG1) family protein;(source:Araport11)"]
["AT5G48040","black","Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11)"]
["AT3G17430","black","Nucleotide/sugar transporter family protein The mRNA is cell-to-cell mobile."]
["AT5G65170","black","VQ motif-containing protein;(source:Araport11)"]
["AT1G51610","black","Cation efflux family protein;(source:Araport11)"]
["AT3G13560","black","O-Glycosyl hydrolases family 17 protein;(source:Araport11)"]
["AT1G14330","black","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT4G35335","black","Nucleotide-sugar transporter family protein;(source:Araport11)"]
["AT3G11620","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT1G12990","black","beta-1,4-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT4G31150","black","endonuclease V family protein;(source:Araport11)"]
["AT5G45590","black","Ribosomal protein L35;(source:Araport11)"]
["AT4G40065","black","other_RNA;(source:Araport11)"]
["AT2G40085","black","hypothetical protein;(source:Araport11)"]
["AT5G58640","black","Selenoprotein, Rdx type;(source:Araport11)"]
["AT4G27480","black","GT14 enzyme"]
["AT3G56590","black","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT4G33180","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT4G18230","black","UDP-N-acetylglucosamine transferase subunit ALG14-like protein;(source:Araport11)"]
["AT4G15215","black","pleiotropic drug resistance 13;(source:Araport11)"]
["AT5G14500","black","aldose 1-epimerase family protein;(source:Araport11)"]
["AT5G47360","black","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G43260","black","F-box and associated interaction domains-containing protein;(source:Araport11)"]
["AT3G61020","black","pseudogene of TRICHOME BIREFRINGENCE-LIKE 32;(source:Araport11)"]
["AT4G24050","black","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT1G21370","black","transmembrane protein;(source:Araport11)"]
["AT1G34340","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT5G22850","black","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT2G44280","black","Major facilitator superfamily protein;(source:Araport11)"]
["AT3G08910","black","DNAJ heat shock family protein;(source:Araport11)"]
["AT1G21170","black","Exocyst complex component SEC5;(source:Araport11)"]
["AT3G59110","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G12000","black","Phosphofructokinase family protein;(source:Araport11)"]
["AT5G07630","black","lipid transporter;(source:Araport11)"]
["AT2G30720","black","Thioesterase/thiol ester dehydrase-isomerase superfamily protein;(source:Araport11)"]
["AT5G66770","black","GRAS family transcription factor;(source:Araport11)"]
["AT1G74300","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT5G42280","black","Cysteine/Histidine-rich C1 domain family protein;(source:Araport11)"]
["AT3G15810","black","LURP-one-like protein (DUF567);(source:Araport11)"]
["AT3G29100","black","Encodes a member of the Arabidopsis v-SNARE (vesicle soluble NSF attachment protein receptor) family that has 3 members: VTI11, VTI12, and VTI13. This gene is not expressed at levels detectable by RT-PCR. However, one EST corresponding to this gene has been isolated."]
["AT3G43740","black","Leucine-rich repeat (LRR) family protein;(source:Araport11)"]
["AT3G07460","black","transmembrane protein, putative (Protein of unknown function, DUF538);(source:Araport11)"]
["AT1G74530","black","transmembrane protein;(source:Araport11)"]
["AT3G04980","black","DNAJ heat shock N-terminal domain-containing protein;(source:Araport11)"]
["AT2G03980","black","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates."]
["AT5G07240","black","Member of IQ67 (CaM binding) domain containing family."]
["AT5G35730","black","EXS (ERD1/XPR1/SYG1) family protein;(source:Araport11)"]
["AT1G28260","black","Telomerase activating protein Est1;(source:Araport11)"]
["AT2G43320","black","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT1G55360","black","tRNA-splicing ligase (DUF239);(source:Araport11)"]
["AT3G50790","black","esterase/lipase/thioesterase family protein;(source:Araport11)"]
["AT4G25290","black","DNA photolyase;(source:Araport11)"]
["AT3G18295","black","DUF1639 family protein, putative (DUF1639);(source:Araport11)"]
["AT5G27950","black","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT3G03570","black","signal transducer, putative (DUF3550/UPF0682);(source:Araport11)"]
["AT4G33550","black","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)"]
["AT3G08990","black","Yippee family putative zinc-binding protein;(source:Araport11)"]
["AT5G17280","black","oxidoreductase-like protein, amino-terminal protein;(source:Araport11)"]
["AT2G44850","black","hypothetical protein;(source:Araport11)"]
["AT1G16500","black","filamentous hemagglutinin transporter;(source:Araport11)"]
["AT5G22700","black","LOW protein: F-box/FBD/LRR-like protein;(source:Araport11)"]
["AT2G28810","black","Dof-type zinc finger DNA-binding family protein;(source:Araport11)"]
["AT1G14010","black","emp24/gp25L/p24 family/GOLD family protein;(source:Araport11)"]
["AT1G43690","black","ubiquitin interaction motif-containing protein;(source:Araport11)"]
["AT4G22850","black","SNARE associated Golgi protein family;(source:Araport11)"]
["AT4G39900","black","adenine deaminase;(source:Araport11)"]
["AT1G78200","black","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT1G74510","black","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT4G30500","black","transmembrane protein (DUF788);(source:Araport11)"]
["AT4G06598","black","basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11)"]
["AT4G32590","black","2Fe-2S ferredoxin-like superfamily protein;(source:Araport11)"]
["AT1G72480","black","Lung seven transmembrane receptor family protein;(source:Araport11)"]
["AT4G11680","black","Zinc finger, C3HC4 type (RING finger) family protein;(source:Araport11)"]
["AT1G19970","black","ER lumen protein retaining receptor family protein;(source:Araport11)"]
["AT1G52905","black","hypothetical protein;(source:Araport11)"]
["AT2G40710","black","hemolysin-III related integral membrane protein;(source:Araport11)"]
["AT1G55690","black","Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11)"]
["AT2G28760","black","Encodes a cytosolic isoform of UDP-glucuronic acid decarboxylase."]
["AT5G49500","black","Signal recognition particle, SRP54 subunit protein;(source:Araport11)"]
["AT3G51730","black","saposin B domain-containing protein;(source:Araport11)"]
["AT1G79630","black","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT5G47730","black","Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11)"]
["AT3G51075","black","Natural antisense transcript overlaps with AT3G51070;(source:Araport11)"]
["AT1G63170","black","Zinc finger, C3HC4 type (RING finger) family protein;(source:Araport11)"]
["AT5G59480","black","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)"]
["AT1G74088","black","galacturonosyltransferase;(source:Araport11)"]
["AT2G05310","black","membrane protein located in chloroplast, high expression in mature leaf."]
["AT4G00420","black","double-stranded RNA-binding domain-containing protein; RLL6 candidate."]
["AT4G17280","black","Auxin-responsive family protein;(source:Araport11)"]
["AT5G18840","black","Major facilitator superfamily protein;(source:Araport11)"]
["AT1G63430","black","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT4G34050","black","Methyltransferase in the lignin biosynthetic pathway."]
["AT1G53560","black","Ribosomal protein L18ae family;(source:Araport11)"]
["AT2G21520","black","Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11)"]
["AT3G23160","black","plant/protein (DUF668);(source:Araport11)"]
["AT5G25170","black","PPPDE putative thiol peptidase family protein;(source:Araport11)"]
["AT4G14200","black","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G35750","black","transmembrane protein;(source:Araport11)"]
["AT4G03140","black","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT4G02360","black","DUF538 domain protein , tandemly repeated with AT4G02370 (ASD4). Expression is induced by ABA and promoter contains ABA response elements. Mutants show decreased sensitivity to ABA."]
["AT4G34215","black","Encodes a member of the SGNH-hydrolase superfamily of enzymes. The enzymes of the SGNH-hydrolase superfamily facilitate the hydrolysis of ester, thioester and amide bonds in a range of substrates including complex polysaccharides, lysophospholipids, acyl-CoA esters and other compounds."]
["AT1G22750","black","transmembrane protein;(source:Araport11)"]
["AT1G28310","black","Dof-type zinc finger DNA-binding family protein;(source:Araport11)"]
["AT4G15930","black","Dynein light chain type 1 family protein;(source:Araport11)"]
["AT5G56790","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT5G45760","black","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT5G28350","black","Quinoprotein amine dehydrogenase, beta chain-like;(source:Araport11)"]
["AT5G07030","black","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT5G14940","black","Major facilitator superfamily protein;(source:Araport11)"]
["AT2G46915","black","DUF3754 family protein, putative (DUF3754);(source:Araport11)"]
["AT3G44430","black","transmembrane protein;(source:Araport11)"]
["AT3G62370","black","heme binding protein;(source:Araport11)"]
["AT5G09680","black","Encodes RLF (Reduced Lateral root Formation). Involved in lateral root formation. Contains a cytochrome b5-like heme/steroid binding domain. Localized in the cytosol."]
["AT2G22530","black","Alkaline-phosphatase-like family protein;(source:Araport11)"]
["AT5G02970","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT3G57965","black","Natural antisense transcript overlaps with AT3G57970;(source:Araport11)"]
["AT5G37310","black","Endomembrane protein 70 protein family;(source:Araport11)"]
["AT1G52600","black","Peptidase S24/S26A/S26B/S26C family protein;(source:Araport11)"]
["AT5G17760","black","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT4G27240","black","zinc finger (C2H2 type) family protein;(source:Araport11)"]
["AT2G23093","black","Major facilitator superfamily protein;(source:Araport11)"]
["AT2G34460","black","Rossmann-fold protein located in chloroplast."]
["AT3G45210","black","transcription initiation factor TFIID subunit (Protein of unknown function, DUF584);(source:Araport11)"]
["AT5G60400","black","hypothetical protein;(source:Araport11)"]
["AT4G00500","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT1G29040","black","50S ribosomal protein L34;(source:Araport11)"]
["AT3G61480","black","Quinoprotein amine dehydrogenase, beta chain-like;(source:Araport11)"]
["AT1G53440","black","Leucine-rich repeat transmembrane protein kinase;(source:Araport11)"]
["AT1G52310","black","protein kinase family protein / C-type lectin domain-containing protein;(source:Araport11)"]
["AT4G24920","black","secE/sec61-gamma protein transport protein;(source:Araport11)"]
["AT3G53370","black","S1FA-like DNA-binding protein;(source:Araport11)"]
["AT1G80290","black","a member of the Glycosyltransferase Family 64 (according to CAZy Database)"]
["AT2G40820","black","stomatal closure actin-binding-like protein;(source:Araport11)"]
["AT1G70550","black","NEP-interacting protein, putative (DUF239);(source:Araport11)"]
["AT1G68300","black","Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)"]
["AT2G36145","black","hypothetical protein;(source:Araport11)"]
["AT1G26920","black","zinc finger CCHC domain protein;(source:Araport11)"]
["AT5G59020","black","hepatocyte growth factor activator, putative (DUF3527);(source:Araport11)"]
["AT1G14970","black","O-fucosyltransferase family protein;(source:Araport11)"]
["AT5G01460","black","LMBR1-like membrane protein;(source:Araport11)"]
["AT5G01260","black","Carbohydrate-binding-like fold;(source:Araport11)"]
["AT2G23940","black","transmembrane protein (DUF788);(source:Araport11)"]
["AT1G50590","black","RmlC-like cupins superfamily protein;(source:Araport11)"]
["AT1G69460","black","emp24/gp25L/p24 family/GOLD family protein;(source:Araport11)"]
["AT3G58130","black","N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein;(source:Araport11)"]
["AT2G18245","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT3G07230","black","wound-responsive protein-like protein;(source:Araport11)"]
["AT1G65150","black","TRAF-like family protein;(source:Araport11)"]
["AT1G60505","black","Natural antisense transcript overlaps with AT1G60510;(source:Araport11)"]
["AT3G46450","black","SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein;(source:Araport11)"]
["AT5G38590","black","F-box/RNI-like/FBD-like domains-containing protein;(source:Araport11)"]
["AT3G44740","black","Class II aaRS and biotin synthetases superfamily protein;(source:Araport11)"]
["AT3G18040","black","Encodes a protein with similarity to MAP kinases (MAPK9).Expressed preferentially in guard cells and appears to be involved in reactive oxygen species mediated ABA signaling."]
["AT5G64030","black","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT5G50330","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT4G00300","black","AT4G00300 has been split into two loci based on new cDNA evidence provided by Aleksander Riise Hansen of University of Copenhagen: AT4G00300.2 becomes AT4G00300.1; a new locus AT4G00295 is created. See comments field for AT4G00295 annotation."]
["AT1G36380","black","transmembrane protein;(source:Araport11)"]
["AT5G51880","black","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT5G66060","black","2-oxoglutarate-dependent dioxygenase"]
["AT5G02540","black","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT1G26450","black","Carbohydrate-binding X8 domain superfamily protein;(source:Araport11)"]
["AT3G11950","black","publications Tian et al (2007) and Sadre et al (2006) refer to At3g11950. The prenyltransferase gene studied is actually At3g11945 which arises from a split of the previous At3g11950 gene model."]
["AT2G34250","black","SecY protein transport family protein;(source:Araport11)"]
["AT1G57770","black","Oxidoreductase located in the chloroplast."]
["AT3G03560","black","hypothetical protein;(source:Araport11)"]
["AT4G20410","black","Encodes a member of the gamma-soluble NSF attachment protein (gSNAP) gene family."]
["AT1G15270","black","Translation machinery associated TMA7;(source:Araport11)"]
["AT1G69030","black","BSD domain-containing protein;(source:Araport11)"]
["AT5G63490","black","CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein;(source:Araport11)"]
["AT1G10020","black","formin-like protein (DUF1005);(source:Araport11)"]
["AT1G44125","black","Natural antisense transcript overlaps with AT1G44120;(source:Araport11)"]
["AT5G58375","black","Methyltransferase-related protein;(source:Araport11)"]
["AT1G10820","black","hypothetical protein (DUF3755);(source:Araport11)"]
["AT4G38040","black","Exostosin family protein;(source:Araport11)"]
["AT5G41060","black","DHHC-type zinc finger family protein;(source:Araport11)"]
["AT1G60690","black","NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11)"]
["AT5G65440","black","transmembrane protein;(source:Araport11)"]
["AT2G34590","black","Transketolase family protein;(source:Araport11)"]
["AT3G08650","black","ZIP metal ion transporter family;(source:Araport11)"]
["AT5G48020","black","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT4G16610","black","C2H2-like zinc finger protein;(source:Araport11)"]
["AT1G23880","black","NHL domain-containing protein;(source:Araport11)"]
["AT5G37290","black","ARM repeat superfamily protein;(source:Araport11)"]
["AT5G03250","black","Phototropic-responsive NPH3 family protein;(source:Araport11)"]
["AT1G09995","black","DNA repair DEAD helicase RAD3/XP-D subfamily protein;(source:Araport11)"]
["AT5G01660","black","influenza virus NS1A-binding protein;(source:Araport11)"]
["AT3G18430","black","Calcium-binding EF-hand family protein;(source:Araport11)"]
["AT4G30260","black","Encodes one of the two YPT/RAB GTPase Interacting Protein 4a (YIP4a) and YIP4b (formerly YIP2), which form a TGN-localized complex with ECHIDNA (ECH). This complex is required for the secretion of cell wall polysaccharides."]
["AT5G15790","black","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G26650","black","Son of sevenless protein;(source:Araport11)"]
["AT5G42370","black","Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11)"]
["AT5G37480","black","maltase-glucoamylase, intestinal protein;(source:Araport11)"]
["AT5G67245","black","hypothetical protein;(source:Araport11)"]
["AT3G54930","black","Protein phosphatase 2A regulatory B subunit family protein;(source:Araport11)"]
["AT4G00840","black","DHHC-type zinc finger family protein;(source:Araport11)"]
["AT1G12310","black","Calcium-binding EF-hand family protein;(source:Araport11)"]
["AT1G48230","black","Nucleotide/sugar transporter family protein"]
["AT3G60050","black","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G02240","black","Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. The mRNA is cell-to-cell mobile."]
["AT1G19200","black","cyclin-dependent kinase, putative (DUF581);(source:Araport11)"]
["AT2G20050","black","possible interacting protein of CAP1"]
["AT1G25375","black","Metallo-hydrolase/oxidoreductase superfamily protein;(source:Araport11)"]
["AT1G03520","black","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT5G41760","black","Nucleotide-sugar transporter family protein;(source:Araport11)"]
["AT1G03290","black","ELKS/Rab6-interacting/CAST family protein;(source:Araport11)"]
["AT5G05480","black","Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein;(source:Araport11)"]
["AT4G12590","black","ER membrane protein complex subunit-like protein (Protein of unknown function DUF106, transmembrane);(source:Araport11)"]
["AT1G09820","black","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)"]
["AT4G36648","black","other_RNA;(source:Araport11)"]
["AT4G36640","black","Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11)"]
["AT2G40435","black","transcription factor SCREAM-like protein;(source:Araport11)"]
["AT4G37680","black","heptahelical transmembrane protein HHP4"]
["AT5G04830","black","Nuclear transport factor 2 (NTF2) family protein;(source:Araport11)"]
["AT3G16510","black","Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11)"]
["AT5G02230","black","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)"]
["AT2G44090","black","Ankyrin repeat family protein;(source:Araport11)"]
["AT1G80325","black","Natural antisense transcript overlaps with AT1G80320;(source:Araport11)"]
["AT1G04200","black","dyggve-melchior-clausen syndrome protein;(source:Araport11)"]
["AT4G03115","black","Mitochondrial substrate carrier family protein;(source:Araport11)"]
["AT5G28050","black","Specifically deaminates (de)guanosine to produce xanthosine with high specificity, which is further converted to xanthine, a key intermediate in purine metabolism and nitrogen recycling."]
["AT2G37120","black","S1FA-like DNA-binding protein;(source:Araport11)"]
["AT1G65295","black","ubiquitin carboxyl-terminal hydrolase;(source:Araport11)"]
["AT1G47740","black","PPPDE putative thiol peptidase family protein;(source:Araport11)"]
["AT1G26300","black","BSD domain-containing protein;(source:Araport11)"]
["AT4G17150","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT5G43310","black","COP1-interacting protein-like protein;(source:Araport11)"]
["AT2G01970","black","Endomembrane protein 70 protein family;(source:Araport11)"]
["AT1G68440","black","Transmembrane protein;(source:Araport11). Expression induced by abiotic stressors such as ABA, drought, heat, light, NaCl, osmotic stress and wounding."]
["AT3G46630","black","DCL protein (DUF3223);(source:Araport11)"]
["AT4G14920","black","Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein;(source:Araport11)"]
["AT5G64550","black","loricrin-like protein;(source:Araport11)"]
["AT2G25737","black","Sulfite exporter TauE/SafE family protein;(source:Araport11)"]
["AT4G25660","black","PPPDE putative thiol peptidase family protein;(source:Araport11)"]
["AT3G19790","black","hypothetical protein;(source:Araport11)"]
["AT1G62050","black","Ankyrin repeat family protein;(source:Araport11)"]
["AT4G01580","black","AP2/B3-like transcriptional factor family protein;(source:Araport11)"]
["AT3G16760","black","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G11230","black","Yippee family putative zinc-binding protein;(source:Araport11)"]
["AT3G52840","black","beta-galactosidase 2;(source:Araport11)"]
["AT2G43375","black","other_RNA;(source:Araport11)"]
["AT1G49700","black","Plant protein 1589 of unknown function;(source:Araport11)"]
["AT4G29870","black","Oligosaccharyltransferase complex/magnesium transporter family protein;(source:Araport11)"]
["AT1G70770","black","Involved in cell wall modifications resulting in resistance to the biotroph Hpa."]
["AT2G38710","black","AMMECR1 family;(source:Araport11)"]
["AT3G08680","black","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT5G41180","black","leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11)"]
["AT2G22795","black","hypothetical protein;(source:Araport11)"]
["AT4G12840","black","GTPase Der (DUF707);(source:Araport11)"]
["AT4G32870","black","Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11)"]
["AT4G35880","black","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT1G05350","black","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT4G37100","black","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11)"]
["AT2G03350","black","DUF538 family protein (Protein of unknown function, DUF538);(source:Araport11)"]
["AT2G01260","black","hypothetical protein (DUF789);(source:Araport11)"]
["AT4G35410","black","Clathrin adaptor complex small chain family protein;(source:Araport11)"]
["AT1G52347","black","None;(source:Araport11)"]
["AT3G49055","black","ATP-binding protein;(source:Araport11)"]
["AT2G23360","black","Domain of unknown function 239 (DUF239) gene; conserved Neprosin-like catalytic domain; possibly involved in seed development."]
["AT3G49050","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT3G15350","black","G14 enzyme"]
["AT1G23330","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT3G06310","black","Cox19-like CHCH family protein;(source:Araport11)"]
["AT1G57700","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT3G09455","black","dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit;(source:Araport11)"]
["AT2G37240","black","Thioredoxin superfamily protein;(source:Araport11)"]
["AT1G24350","black","Acid phosphatase/vanadium-dependent haloperoxidase-related protein;(source:Araport11)"]
["AT5G42720","black","Glycosyl hydrolase family 17 protein;(source:Araport11)"]
["AT4G14980","black","Cysteine/Histidine-rich C1 domain family protein;(source:Araport11)"]
["AT5G07910","black","Leucine-rich repeat (LRR) family protein;(source:Araport11)"]
["AT5G23390","black","polygalacturonase inhibitor (DUF639);(source:Araport11)"]
["AT2G14247","black","Expressed protein;(source:Araport11)"]
["AT3G60480","black","StAR lipid transfer-like protein;(source:Araport11)"]
["AT5G17840","black","DnaJ/Hsp40 cysteine-rich domain superfamily protein;(source:Araport11)"]
["AT5G65820","black","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G65620","black","Zincin-like metalloproteases family protein;(source:Araport11)"]
["AT5G20580","black","TMEM192 family protein;(source:Araport11)"]
["AT3G54880","black","zinc finger protein;(source:Araport11)"]
["AT1G07590","black","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G16720","black","Encodes HCF173, a protein with weak similarities to the superfamily of the short-chain dehydrogenases/reductases. HCF173 is involved in the initiation of translation of the psbA mRNA and binds a specific site in the 5' UTR of psbA mRNA. Mutants shows a high chlorophyll fluorescence phenotype (hcf) and are severely affected in the accumulation of PSII subunits. The protein HCF173 is localized in the chloroplast, where it is mainly associated with the membrane system and is part of a higher molecular weight complex with psbA mRNA as a component of this complex."]
["AT1G69420","black","DHHC-type zinc finger family protein;(source:Araport11)"]
["AT1G27350","black","Ribosome associated membrane protein RAMP4;(source:Araport11)"]
["AT5G45560","black","Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein;(source:Araport11)"]
["AT5G16810","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT3G48980","black","O-glucosyltransferase rumi-like protein (DUF821);(source:Araport11)"]
["AT5G14410","black","hypothetical protein;(source:Araport11)"]
["AT4G17960","black","phospholipid hydroperoxide glutathione peroxidase;(source:Araport11)"]
["AT2G41890","black","curculin-like (mannose-binding) lectin family protein / PAN domain-containing protein;(source:Araport11)"]
["AT1G64890","black","Major facilitator superfamily protein;(source:Araport11)"]
["AT2G25100","black","Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11)"]
["AT2G35155","black","Trypsin family protein;(source:Araport11)"]
["AT2G02780","black","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT1G18180","black","3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295);(source:Araport11)"]
["AT4G19660","black","Encodes NPR4, a ankyrin repeat BTB/POZ domain-containing protein with 36% sequence identity with NPR1. Mutants are more susceptible to the bacterial pathogen Pseudomonas syringe pv. tomato DC3000 and to the fungal pathogen Erysiphe cichoracearum, but do not differ markedly from wild type in interaction with virulent and avirulent strains of the oomycete Peronospora parasitica. NPR4 is required for basal defense against pathogens, and may be implicated in the cross-talk between the SA- and JA-dependent signaling pathways. NPR3 and NPR4 are receptors for the immune signal salicylic acid."]
["AT1G12805","black","nucleotide binding protein;(source:Araport11)"]
["AT4G14020","black","Rapid alkalinization factor (RALF) family protein;(source:Araport11)"]
["AT5G62140","black","ATP-dependent Clp protease ATP-binding subunit;(source:Araport11)"]
["AT3G02460","black","Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11)"]
["AT5G21070","black","Fe(3+) dicitrate transport system permease;(source:Araport11)"]
["AT1G07280","black","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G07750","black","RmlC-like cupins superfamily protein;(source:Araport11)"]
["AT2G16390","black","Putative chromatin remodeling protein, member of a plant-specific subfamily of SWI2/SNF2-like proteins. Mutations nearly eliminate non-CpG methylation at a target promoter but do not affect rDNA or centromere methylation. Cooperates with PolIVb to facilitate RNA-directed de novo methylation and silencing of homologous DNA. Endogenous targets include intergenic regions near retrotransposon LTRs or short RNA encoding sequences that might epigenetically regulate adjacent genes. May be used to establish a basal yet reversible level of silencing in euchromatin."]
["AT5G16520","black","transmembrane protein;(source:Araport11)"]
["AT2G25530","black","AFG1-like ATPase family protein;(source:Araport11)"]
["AT5G20500","black","Glutaredoxin family protein;(source:Araport11)"]
["AT2G33170","black","Leucine-rich repeat receptor-like protein kinase family protein;(source:Araport11)"]
["AT5G06060","black","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT4G24730","black","manganese-dependent ADP-ribose/CDP-alcohol diphosphatase-like protein;(source:Araport11)"]
["AT5G10050","black","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT3G09690","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT4G29700","black","Alkaline-phosphatase-like family protein;(source:Araport11)"]
["AT3G54270","black","sucrose-6F-phosphate phosphohydrolase family protein;(source:Araport11)"]
["AT5G13770","black","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)"]
["AT5G55790","black","hypothetical protein;(source:Araport11)"]
["AT5G16890","black","Exostosin family protein;(source:Araport11)"]
["AT5G42030","black","ABL interactor-like protein 4;(source:Araport11)"]
["AT3G27320","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT2G22230","black","Thioesterase superfamily protein;(source:Araport11)"]
["AT3G22420","black","Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms."]
["AT2G16790","black","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT5G61240","black","Leucine-rich repeat (LRR) family protein;(source:Araport11)"]
["AT1G12450","black","SNARE associated Golgi protein family;(source:Araport11)"]
["AT4G21890","black","zinc finger MYND domain protein;(source:Araport11)"]
["AT5G28910","black","alpha-(1,6)-fucosyltransferase;(source:Araport11)"]
["AT2G02765","black","L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase;(source:Araport11)"]
["AT5G54850","black","hexon;(source:Araport11)"]
["AT2G35470","black","ribosome maturation factor;(source:Araport11)"]
["AT5G51510","black","jagunal-like protein;(source:Araport11)"]
["AT1G10280","black","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT2G04280","black","calcium ion-binding protein;(source:Araport11)"]
["AT3G15470","black","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT1G26940","black","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11)"]
["AT1G62860","black","pseudogene of pentatricopeptide (PPR) repeat-containing protein"]
["AT1G47860","black","transposable_element_gene;(source:Araport11);non-LTR retrotransposon family (LINE), has a 9.0e-40 P-value blast match to GB:NP_038605 L1 repeat, Tf subfamily, member 30 (LINE-element) (Mus musculus);(source:TAIR10)"]
["AT1G47565","black","transposable_element_gene;(source:Araport11);retrotransposon gag protein, contains Pfam:PF03732 Retrotransposon gag protein;(source:TAIR10)"]
["AT3G48410","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT2G24040","black","Low temperature and salt responsive protein family;(source:Araport11)"]
["AT3G62580","black","Late embryogenesis abundant protein (LEA) family protein;(source:Araport11)"]
["AT1G62480","black","Vacuolar calcium-binding protein-like protein;(source:Araport11)"]
["AT1G15490","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT1G49730","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G67792","black","Natural antisense transcript overlaps with AT1G67790;(source:Araport11)"]
["AT5G47940","black","40S ribosomal protein S27;(source:Araport11)"]
["AT5G37530","black","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT4G16140","black","proline-rich family protein;(source:Araport11)"]
["AT1G51540","black","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT1G74640","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT3G59390","black","glycosyltransferase family protein;(source:Araport11)"]
["AT2G46290","black","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT4G05040","black","ankyrin repeat family protein;(source:Araport11)"]
["AT5G41850","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT4G02550","black","Myb/SANT-like DNA-binding domain protein;(source:Araport11)"]
["AT5G27300","black","pentatricopeptide (PPR) repeat-containing protein;(source:Araport11)"]
["AT5G65650","black","sugar transporter, putative (DUF1195);(source:Araport11)"]
["AT2G28430","black","zinc finger, C3HC4 type family protein;(source:Araport11)"]
["AT4G36190","black","Serine carboxypeptidase S28 family protein;(source:Araport11)"]
["AT1G54575","black","hypothetical protein;(source:Araport11)"]
["AT5G09620","black","Octicosapeptide/Phox/Bem1p family protein;(source:Araport11)"]
["AT5G16990","black","molecular function has not been defined, was shown involved in oxidative stress tolerance. The mRNA is cell-to-cell mobile."]
["AT1G25500","black","Plasma-membrane choline transporter family protein;(source:Araport11)"]
["AT5G42770","black","Maf-like protein;(source:Araport11)"]
["AT5G40600","black","bromodomain testis-specific protein;(source:Araport11)"]
["AT5G38380","black","zinc transporter;(source:Araport11)"]
["AT3G53680","black","Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein;(source:Araport11)"]
["AT5G05310","black","TLC ATP/ADP transporter;(source:Araport11)"]
["AT4G13150","black","transmembrane protein;(source:Araport11)"]
["AT3G13030","black","hAT transposon superfamily protein;(source:Araport11)"]
["AT4G28770","black","Tetraspanin family protein;(source:Araport11)"]
["AT3G19340","black","aminopeptidase (DUF3754);(source:Araport11)"]
["AT1G78810","black","hypothetical protein;(source:Araport11)"]
["AT2G46100","black","Nuclear transport factor 2 (NTF2) family protein;(source:Araport11)"]
["AT1G10350","black","DNAJ heat shock family protein;(source:Araport11)"]
["AT5G19670","black","Exostosin family protein;(source:Araport11)"]
["AT5G09995","black","transmembrane protein;(source:Araport11)"]
["AT3G58690","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G43910","black","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT2G38570","black","hypothetical protein;(source:Araport11)"]
["AT4G32000","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT4G23490","black","fringe-like protein (DUF604);(source:Araport11)"]
["AT5G55180","black","O-Glycosyl hydrolases family 17 protein;(source:Araport11)"]
["AT1G65270","black","ER membrane protein complex subunit-like protein;(source:Araport11)"]
["AT4G10140","black","transmembrane protein;(source:Araport11)"]
["AT1G52910","black","fiber (DUF1218);(source:Araport11)"]
["AT1G63400","black","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G24040","black","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT2G15860","black","BAT2 domain protein;(source:Araport11)"]
["AT4G01210","black","glycosyl transferase family 1 protein;(source:Araport11)"]
["AT5G47050","black","SBP (S-ribonuclease binding protein) family protein;(source:Araport11)"]
["AT5G45030","black","Trypsin family protein;(source:Araport11)"]
["AT5G23550","black","Got1/Sft2-like vesicle transport protein, which may be located to a late-Golgi com\u0002partment and may be involved in the fusion of retrograde transport vesicles derived from an endocytic compartment with the Golgi complex. Nuclear shuttle protein-interacting protein."]
["AT1G05430","black","Hypothetical protein, expression induced by Al."]
["AT2G40110","black","Yippee family putative zinc-binding protein;(source:Araport11)"]
["AT1G09195","black","Ppx-GppA phosphatase;(source:Araport11)"]
["AT2G44670","black","senescence-associated family protein (DUF581);(source:Araport11)"]
["AT3G59500","black","Integral membrane HRF1 family protein;(source:Araport11)"]
["AT1G06470","black","Nucleotide/sugar transporter family protein;(source:Araport11)"]
["AT4G04221","black","Natural antisense transcript overlaps with AT4G04220;(source:Araport11)"]
["AT2G47440","black","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G07700","black","Thioredoxin superfamily protein;(source:Araport11)"]
["AT1G52780","black","Putative regeneration determinant regulated by TCSA."]
["AT1G10650","black","SBP (S-ribonuclease binding protein) family protein;(source:Araport11)"]
["AT3G52610","black","GATA zinc finger protein;(source:Araport11)"]
["AT3G62460","black","Putative endonuclease or glycosyl hydrolase;(source:Araport11)"]
["AT5G20885","black","RING/U-box superfamily protein;(source:Araport11)"]
["AT4G24760","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT3G06035","black","Glycoprotein membrane precursor GPI-anchored;(source:Araport11)"]
["AT5G57210","black","Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11)"]
["AT2G05790","black","O-Glycosyl hydrolases family 17 protein;(source:Araport11)"]
["AT5G54760","black","Translation initiation factor SUI1 family protein;(source:Araport11)"]
["AT3G05165","black","Major facilitator superfamily protein;(source:Araport11)"]
["AT1G62914","black","pentatricopeptide (PPR) repeat-containing protein;(source:Araport11)"]
["AT1G73850","black","DNA ligase (DUF1666);(source:Araport11)"]
["AT1G27100","black","Actin cross-linking protein;(source:Araport11)"]
["AT1G10750","black","carboxyl-terminal peptidase, putative (DUF239);(source:Araport11)"]
["AT5G22580","black","Stress responsive A/B Barrel Domain-containing protein;(source:Araport11)"]
["AT2G35075","black","hypothetical protein;(source:Araport11)"]
["AT2G39830","black","Essential for early phloem development and function, and for root system development.DAR2 is a member of a small (7 member) ubiquitin binding protein family. It appears to play a role in regulation of endoreduplication in leaf epidermal tissue."]
["AT4G25600","black","Oxoglutarate/iron-dependent oxygenase;(source:Araport11)"]
["AT1G29418","black","transmembrane protein;(source:Araport11)"]
["AT4G33140","black","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)"]
["AT5G58520","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT5G16940","black","carbon-sulfur lyase;(source:Araport11)"]
["AT1G33260","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G28400","black","GATA zinc finger protein;(source:Araport11)"]
["AT4G24530","black","O-fucosyltransferase family protein;(source:Araport11)"]
["AT5G64830","black","programmed cell death 2 C-terminal domain-containing protein;(source:Araport11)"]
["AT3G03360","black","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT3G51000","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT5G55550","black","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT5G14030","black","translocon-associated protein beta (TRAPB) family protein;(source:Araport11)"]
["AT4G36660","black","polyol transporter, putative (DUF1195);(source:Araport11)"]
["AT3G21400","black","dynein beta chain, ciliary protein;(source:Araport11)"]
["AT2G21260","black","NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11)"]
["AT2G13690","black","PRLI-interacting factor;(source:Araport11)"]
["AT1G53880","black","translation initiation factor eIF-2B subunit alpha;(source:Araport11)"]
["AT5G41460","black","transferring glycosyl group transferase (DUF604);(source:Araport11)"]
["AT2G42240","black","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT4G40042","black","Microsomal signal peptidase 12 kDa subunit (SPC12);(source:Araport11)"]
["AT1G26690","black","emp24/gp25L/p24 family/GOLD family protein;(source:Araport11)"]
["AT1G34640","black","peptidase;(source:Araport11)"]
["AT1G14820","black","Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11)"]
["AT1G76710","black","SET domain group 26;(source:Araport11)"]
["AT5G23100","black","MIZU-KUSSEI-like protein (Protein of unknown function, DUF617);(source:Araport11)"]
["AT4G31890","black","ARM repeat superfamily protein;(source:Araport11)"]
["AT1G16916","black","transmembrane protein;(source:Araport11)"]
["AT1G75730","black","hypothetical protein;(source:Araport11)"]
["AT4G30470","black","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT1G42480","black","TLR4 regulator/MIR-interacting MSAP protein;(source:Araport11)"]
["AT5G59470","black","Mannose-P-dolichol utilization defect 1 protein;(source:Araport11)"]
["AT3G60520","black","zinc ion-binding protein;(source:Araport11)"]
["AT3G20090","black","cytochrome P450, family 705, subfamily A, polypeptide 18;(source:Araport11)"]
["AT5G52280","black","Myosin heavy chain-related protein;(source:Araport11)"]
["AT5G55060","black","Rab3 GTPase-activating protein catalytic subunit;(source:Araport11)"]
["AT5G11910","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT5G09670","black","loricrin-like protein;(source:Araport11)"]
["AT3G26720","black","Glycosyl hydrolase family 38 protein;(source:Araport11)"]
["AT1G25530","black","Transmembrane amino acid transporter family protein;(source:Araport11)"]
["AT5G45290","black","RING/U-box superfamily protein;(source:Araport11)"]
["AT5G66120","black","3-dehydroquinate synthase;(source:Araport11)"]
["AT5G59770","black","Protein-tyrosine phosphatase-like, PTPLA;(source:Araport11)"]
["AT4G12230","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT3G01410","black","Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11)"]
["AT5G22810","black","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates."]
["AT2G26680","black","FkbM family methyltransferase;(source:Araport11)"]
["AT4G33625","black","vacuole protein;(source:Araport11)"]
["AT5G19630","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT5G05830","black","RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11)"]
["AT5G14370","black","CCT motif family protein;(source:Araport11)"]
["AT5G27710","black","T-box protein;(source:Araport11)"]
["AT5G59900","black","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G18770","black","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT1G35612","black","pseudogene of Ulp1 protease family protein"]
["AT1G27330","black","Ribosome associated membrane protein RAMP4;(source:Araport11)"]
["AT1G45207","black","Remorin family protein;(source:Araport11)"]
["AT4G35785","black","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT1G80960","black","F-box and Leucine Rich Repeat domains containing protein;(source:Araport11)"]
["AT1G60700","black","SMAD/FHA domain-containing protein;(source:Araport11)"]
["AT1G57765","black","transmembrane protein;(source:Araport11)"]
["AT1G54850","black","HSP20-like chaperones superfamily protein;(source:Araport11)"]
["AT1G48160","black","signal recognition particle 19 kDa protein, putative / SRP19;(source:Araport11)"]
["AT4G24380","black","dihydrofolate reductase;(source:Araport11)"]
["AT3G45090","black","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT4G30940","black","BTB/POZ domain with WD40/YVTN repeat-like protein;(source:Araport11)"]
["AT3G55490","black","GINS complex protein;(source:Araport11)"]
["AT1G09023","black","Natural antisense transcript overlaps with AT1G68940;(source:Araport11)"]
["AT1G76550","black","Phosphofructokinase family protein. Target of miRNA sRNA6."]
["AT1G48440","black","B-cell receptor-associated 31-like protein;(source:Araport11)"]
["AT5G52990","black","SNARE-like superfamily protein;(source:Araport11)"]
["AT4G35905","black","Trm112p-like protein;(source:Araport11)"]
["AT4G17430","black","O-fucosyltransferase family protein;(source:Araport11)"]
["AT2G18630","black","transmembrane protein, putative (DUF677);(source:Araport11)"]
["AT2G46620","black","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT1G19430","black","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT3G24840","black","Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11)"]
["AT1G47900","black","filament-like protein (DUF869);(source:Araport11)"]
["AT2G26600","black","Glycosyl hydrolase superfamily protein;(source:Araport11)"]
["AT1G72170","black","MICOS complex subunit, putative (DUF543);(source:Araport11)"]
["AT4G40045","black","transmembrane protein;(source:Araport11)"]
["AT3G54080","black","Concanavalin A-like lectin family protein;(source:Araport11)"]
["AT2G40270","black","Protein kinase family protein;(source:Araport11)"]
["AT5G52410","black","oxidoreductase/transition metal ion-binding protein;(source:Araport11)"]
["AT5G11810","black","rhomboid family protein;(source:Araport11)"]
["AT5G18500","black","Protein kinase superfamily protein;(source:Araport11)"]
["AT3G23640","black","Protein which interacts with Feronia; likely involved in FER-mediated intracellular signaling pathways that are essential in plant growth and development, and possibly plant immunity."]
["AT1G13970","black","beta-hexosaminidase (DUF1336);(source:Araport11)"]
["AT5G66950","black","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11)"]
["AT5G02790","black","GST functions in reductive deglutathionylation of glutathione conjugates of quercetin.","GLUTATHIONE TRANSFERASE L3 (GSTL3)"]
["AT2G30340","black","Lateral Organ Boundaries domain protein. LOB13 promotes lateral root formation. No significant transcriptional activation or repression activity was detected by the transient dual-luciferase assay (10.1111/tpj.16273).","LOB DOMAIN-CONTAINING PROTEIN 13 (LBD13)"]
["AT3G09570","black","Lung seven transmembrane receptor family protein;(source:Araport11)","(7TM2)","(7TM2)"]
["AT5G18070","black","Encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes).","DNA-DAMAGE-REPAIR/TOLERATION 101 (DRT101)","(AGM);DNA-DAMAGE-REPAIR/TOLERATION 101 (DRT101)"]
["AT3G28940","black","Encodes a protein with similarity to gamma-glutamyl cyclotransferases but lacking that activity. Functions with AIG2A (AT3G28930) to regulate production of tryptophan secondary metabolites. Loss of function results in increased immunity to Pst DC3000.","(AIG2B)","(AIG2B)"]
["AT3G28950","black","AIG2-like (avirulence induced gene) family protein;(source:Araport11)","(AIG2C)","(AIG2C)"]
["AT2G24390","black","AIG2-like (avirulence induced gene) family protein;(source:Araport11)","(AIG2LD)","(AIG2LD)"]
["AT2G17970","black","N6-methyladenosine (m6A) demethylase involved in the demethylation of alfalfa mosaic virus (AMV) RNA.","(ALKBH9B)","(ALKBH9B)"]
["AT4G03070","black","Encodes a possible 2-oxoglutarate-dependent dioxygenase that is involved in glucosinolate biosynthesis. The gene is expressed in all ecotypes examined but the enzymatic activity has not been determined experimentally. In Col, there is one copy of this gene (aka AOP1.1) but Ler contains two copies, AOP1.1 and a tightly linked AOP1.2.","(AOP1)","(AOP1); (AOP); (AOP1.1)"]
["AT4G03050","black","The transcribed allele in ecotype Ler encodes a 2-oxoglutarate-dependent dioxygenase which is involved in glucosinolate biosynthesis. AOP3 is transcriptionally silent in leaf tissues of ecotype Col.The natural variation in this locus explains the diversification of hydroxyalkyl glucosinolates among different ecotypes of Arabidopsis.","(AOP3)","(AOP3)"]
["AT4G23460","black","Part of adaptor protein (AP) complex which mediadates clathrin-dependent trafficking at the trans-Golgi network (TGN) and the plasma membrane, respectively. Required for trafficking to plasma membrane and vacuoles.","(AP1/2&#946;2)","(AP1/2&#946;2)"]
["AT4G14147","black","actin-related protein 2/3 complex 34kDa subunit family / arp2/3 complex 34kDa subunit family","(ARPC4)","(ARPC4)"]
["AT4G38250","black","Transmembrane amino acid transporter family protein;(source:Araport11)","(AT4G38250)","(AT4G38250)"]
["AT2G36380","black","pleiotropic drug resistance 6;(source:Araport11)","ATP-BINDING CASSETTE G34 (ABCG34)","(ATABCG34);PLEIOTROPIC DRUG RESISTANCE 6 (PDR6);PLEIOTROPIC DRUG RESISTANCE 6 (ATPDR6);ATP-BINDING CASSETTE G34 (ABCG34)"]
["AT3G05020","black","encodes an acyl carrier protein expressed in leaves, roots, and dry seeds. Protein is not regulated by light. Involved in PAMP-triggered immunity.","ACYL CARRIER PROTEIN 1 (ACP1)","(ATACP1);ACYL CARRIER PROTEIN (ACP);ACYL CARRIER PROTEIN 1 (ACP1)"]
["AT1G54630","black","encodes an acyl carrier protein expressed in leaves, roots, and dry seeds. Gene expression is not regulated by light.","ACYL CARRIER PROTEIN 3 (ACP3)","(ATACP3);ACYL CARRIER PROTEIN 3 (ACP3)"]
["AT3G46010","black","Actin-depolymerizing factor (ADF) and cofilin define a family of actin-binding proteins essential for the rapid turnover of filamentous actin in vivo.","ACTIN DEPOLYMERIZING FACTOR 1 (ADF1)","(ATADF1);ACTIN DEPOLYMERIZING FACTOR 1 (ADF1); (atadf)"]
["AT4G34460","black","Encodes the heterotrimeric G-protein beta subunit and is involved in organ shape. A significant fraction of the protein is found in the ER. Mutants carrying null alleles express similar fruit phenotypes, as seen in er plants, but differ from er in that the stem is only slightly shorter than that in the wild type, the pedicel is slightly longer than that in the wild type, and the leaves are rounder than those in er mutants. Gene is expressed in all tissues examined, with highest expression level found in siliques. It is involved in resistance to Plectosphaerella cucumerina. The predicted protein has two DWD motifs. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase. It seems to be involved in the calcium-mediated response to extracellular ATP.","GTP BINDING PROTEIN BETA 1 (AGB1)","(ATAGB1);ERECTA-LIKE 4 (ELK4);GTP BINDING PROTEIN BETA 1 (AGB1)"]
["AT5G47420","black","PAWH2 along with PAWH1 is part of endoplasmic reticulum ubiquitin ligase complex with Arabidopsis HRD1 via interaction with EBS7. As such it plays a role in promoting protein degradation via the ERAD pathway.","PROTEIN ASSOCIATED WITH HRD1-2 (PAWH2)","(ATAIM24- B2);PROTEIN ASSOCIATED WITH HRD1-2 (PAWH2)"]
["AT5G37020","black","Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF6 to control stamen elongation and flower maturation. Expression of ARF8 is controlled by miR167.","AUXIN RESPONSE FACTOR 8 (ARF8)","(ATARF8);AUXIN RESPONSE FACTOR 8 (ARF8)"]
["AT5G52210","black","A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.","GTP-BINDING PROTEIN 1 (GB1)","(ATARLB1);GTP-BINDING PROTEIN 1 (GB1);GTP-BINDING PROTEIN 1 (ATGB1)"]
["AT1G60710","black","Encodes ATB2.","(ATB2)","(ATB2)"]
["AT4G34590","black","Encodes a basic domain leucine zipper (bZip) transcription factor bZIP11. Translation is repressed by sucrose that results in ribosome stalling in the uORF2. Directly regulates gene expression of ASN1 and ProDH2, which are enzyme-coding genes involved in amino acid metabolism. Susceptibility factor during Pseudomonas syringae infection.","G-BOX BINDING FACTOR 6 (GBF6)","(ATB2);G-BOX BINDING FACTOR 6 (GBF6);ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 11 (AtbZIP11); (BZIP11); (ATBZIP11)"]
["AT4G14455","black","Encodes a Bet1/Sft1-like SNARE protein, which can only partially suppresses the temperature-sensitive growth defect in <i>sft1-1</i> yeast cells; however, it cannot support the deletion of the yeast BET1 gene (<i>bet1&#916;</i>). In yeast, Bet1p is the v-SNARE (soluble N-ethylmaleimide-sensitive factor adaptor protein receptor, V-type) involved in trafficking between the ER and Golgi.","(ATBET12)","(ATBET12); (BET12);ARABIDOPSIS THALIANA BET1P/SFT1P-LIKE PROTEIN 14BB (ATBS14B);BET1P/SFT1P-LIKE PROTEIN 14BB (BS14B)"]
["AT1G61660","black","Encodes a transcriptional activator that regulates the expression of genes by binding to their GCG- or E-boxes to mediate physiological responses, including proline biosynthesis and ROS scavenging pathways, to enhance stress tolerance. Governs the competence of pericycle cells to initiate lateral root primordium formation.","(ATBHLH112)","(ATBHLH112); (PFA4)"]
["AT1G03457","black","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)","BRUNO-LIKE 2 (BRN2)","(ATBRN2);BRUNO-LIKE 2 (BRN2)"]
["AT3G14000","black","Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.BRXL2 becomes polarly localized to the cortical region MMCs during stomatal development.","(ATBRXL2)","(ATBRXL2); (BRX-LIKE2); (BRXL2)"]
["AT1G04990","black","Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11)","(ATC3H3)","(ATC3H3)"]
["AT3G48440","black","Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11)","(ATC3H43)","(ATC3H43)"]
["AT3G51950","black","Contains single CCCH domain.","(ATC3H46)","(ATC3H46)"]
["AT5G12850","black","CCCH-type zinc finger protein with ARM repeat domain-containing protein;(source:Araport11)","TANDEM ZINC FINGER 8 (TZF8)","(ATC3H56);TANDEM ZINC FINGER 8 (TZF8)"]
["AT5G16540","black","Encodes a zinc finger protein.","ZINC FINGER NUCLEASE 3 (ZFN3)","(ATC3H57);ZINC FINGER NUCLEASE 3 (ZFN3)"]
["AT5G18550","black","Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11)","(ATC3H58)","(ATC3H58)"]
["AT1G02305","black","Encodes a capase involved in stress induced cell death.","(ATCATHB2)","(ATCATHB2)"]
["AT5G05270","black","Chalcone-flavanone isomerase family protein.","CHALCONE ISOMERASE LIKE (CHIL)","(ATCHIL);CHALCONE ISOMERASE LIKE (CHIL)"]
["AT5G51660","black","cleavage and polyadenylation specificity factor 160;(source:Araport11)","CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 160 (CPSF160)","(ATCPSF160);CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 160 (CPSF160)"]
["AT2G18730","black","diacylglycerol kinase 3;(source:Araport11)","DIACYLGLYCEROL KINASE 3 (DGK3)","(ATDGK3);DIACYLGLYCEROL KINASE 3 (DGK3)"]
["AT1G07670","black","TPLATE complex protein involved in clathrin-mediated endocytosis.","ENDOMEMBRANE-TYPE CA-ATPASE 4 (ECA4)","(ATECA4);ENDOMEMBRANE-TYPE CA-ATPASE 4 (ECA4)"]
["AT2G44440","black","Emsy N Terminus (ENT) domain-containing protein;(source:Araport11)","EMSY-LIKE 4 (EML4)","(AtEML4);EMSY-LIKE 4 (EML4)"]
["AT3G62600","black","J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast. Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.","(ATERDJ3B)","(ATERDJ3B); (ERDJ3B)"]
["AT3G20310","black","Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-7). The protein contains one AP2 domain. Phosphorylated by PKS3 in vitro. Involved in ABA-mediated responses. Acts as a repressor of GCC box?mediated transcription together with AtSin3 and HDA19.","ETHYLENE RESPONSE FACTOR 7 (ERF7)","(ATERF-7); (ATERF7);ETHYLENE RESPONSE FACTOR 7 (ERF7)"]
["AT5G16400","black","Encodes an f-type thioredoxin (Trx-f2) localized in chloroplast stroma.","THIOREDOXIN F2 (TRXF2)","(ATF2);THIOREDOXIN F2 (TRXF2)"]
["AT5G48650","black","Negative regulator of defense response to Pseudomonas syringae pv. tomato through altered stomatal and apoplastic immunity.","GTPASE?ACTIVATING PROTEIN SH3-DOMAIN?BINDING PROTEIN LIKE (G3BP-LIKE)","(ATG3BP1);GTPASE?ACTIVATING PROTEIN SH3-DOMAIN?BINDING PROTEIN LIKE (G3BP-LIKE)"]
["AT3G59950","black","Autophagy protein.","(ATG4B)","(ATG4B)"]
["AT1G74210","black","Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family.","GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 5 (GDPD5)","(AtGDPD5);GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 5 (GDPD5)"]
["AT2G34510","black","Protein of unknown function, DUF642. Found in cellulose enriched cell wall fractions.","(ATHB-1)","(ATHB-1)"]
["AT1G30490","black","Dominant PHV mutations cause transformation of abaxial leaf fates into adaxial leaf fates. Has overlapping functions with PHABULOSA, REVOLUTA and CORONA/ATHB15 in patterning the apical portion of the embryo. Encodes a member of HD-Zip family which contains homeodomain-leucine zipper domains and domain similar to a mammalian sterol binding domain.","PHAVOLUTA (PHV)","(ATHB9);PHAVOLUTA (PHV)"]
["AT5G20140","black","Encodes a haem-binding protein, HBP5. HBP5 binds haem and interacts with the haem oxygenase, HY1. Disrupting the binding of HBP5 to HY1 leads to oxidative stress.","HAEM-BINDING PROTEIN 5 (HBP5)","(ATHBP5);HAEM-BINDING PROTEIN 5 (HBP5)"]
["AT2G15570","black","chloroplast protein similar to prokaryotic thioredoxin.","(ATHM3)","(ATHM3);ARABIDOPSIS THIOREDOXIN M-TYPE 3 (ATM3);THIOREDOXIN-M3 (TRX-M3);GFP ARRESTED TRAFFICKING 1 (GAT1)"]
["AT2G43940","black","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)","HARMLESS TO OZONE LAYER 3 (HOL3)","(ATHOL3);HARMLESS TO OZONE LAYER 3 (HOL3)"]
["AT1G19180","black","JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2. The mRNA is cell-to-cell mobile.","JASMONATE-ZIM-DOMAIN PROTEIN 1 (JAZ1)","(ATJAZ1); (TIFY10A);JASMONATE-ZIM-DOMAIN PROTEIN 1 (JAZ1)"]
["AT1G67730","black","Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene. The mRNA is cell-to-cell mobile.","BETA-KETOACYL REDUCTASE 1 (KCR1)","(ATKCR1);BETA-KETOACYL REDUCTASE 1 (KCR1); (YBR159)"]
["AT2G03110","black","putative RNA-binding protein;(source:Araport11)","(ATKH5)","(ATKH5)"]
["AT3G16630","black","Kinesin-13A localized to entire Golgi stacks. Involved in trichome development.","(KINESIN-13A)","(ATKINESIN-13A); (KINESIN-13A)"]
["AT1G24793","black","UDP-3-O-acyl N-acetylglycosamine deacetylase family protein;(source:Araport11)","LIPID X C1 (LPXC1)","(ATLPXC1);LIPID X C1 (LPXC1)"]
["AT1G25054","black","UDP-3-O-acyl N-acetylglycosamine deacetylase family protein;(source:Araport11)","LIPID X C3 (LPXC3)","(ATLPXC3);LIPID X C3 (LPXC3)"]
["AT2G01910","black","Binds microtubules. Induces a crisscross mesh of microtubules, not bundles. Not involved in microtubule polymerization nor nucleation. Localizes to mitochondria. The mRNA is cell-to-cell mobile.","(ATMAP65-6)","(ATMAP65-6); (MAP65-6)"]
["AT3G15790","black","Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.","METHYL-CPG-BINDING DOMAIN 11 (MBD11)","(ATMBD11);METHYL-CPG-BINDING DOMAIN 11 (MBD11)"]
["AT4G26070","black","Member of MAP Kinase Kinase. Likely functions in a stress-activated MAPK pathway. Can phosphorylate the MAPK AtMPK4, in response to stress. Gets phosphorylated by MEKK1 in response to wounding.","MAP KINASE/ ERK KINASE 1 (MEK1)","(ATMEK1);MITOGEN ACTIVATED PROTEIN KINASE KINASE 1 (MKK1);MAP KINASE/ ERK KINASE 1 (MEK1); (NMAPKK)"]
["AT1G78790","black","Encodes a protein with high similarity to mammalian MHF2 that acts in the same pathway as FANCM to restrain class II meiotic crossing over.","ARABIDOPSIS HOMOLOG OF MAMMALIAN MHF2 (MHF2)","(ATMHF2);ARABIDOPSIS HOMOLOG OF MAMMALIAN MHF2 (MHF2)"]
["AT3G05830","black","Encodes alpha-helical IF (intermediate filament)-like protein.NEAP1 is a member of a small family containing coiled-coil domains, a nuclear localization signal and a C-terminal predicted transmembrane domain. It localizes to the nuclear periphery. Mutants have altered nuclear morphology and chromatin structure.","(ATNEAP1)","(ATNEAP1)"]
["AT5G35080","black","Encodes a protein involved in the endoplasmic reticulum-associated degradation of glycoproteins.","OS9 (OS9)","(ATOS9);OS9 (OS9)"]
["AT3G53260","black","Encodes phenylalanine lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).","PHENYLALANINE AMMONIA-LYASE 2 (PAL2)","(ATPAL2);PHENYLALANINE AMMONIA-LYASE 2 (PAL2)"]
["AT4G39230","black","encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.","PHENYLCOUMARAN BENZYLIC ETHER REDUCTASE 1 (PCBER1)","(ATPCBER1);PHENYLCOUMARAN BENZYLIC ETHER REDUCTASE 1 (PCBER1)"]
["AT5G04510","black","Encodes 3-phosphoinositide-dependent protein kinase that contains pleckstrin homology domain and binds 3-phosphoinositides. It activates the protein kinase AGC2-1 in a phosphatidic acid dependent manner. Phosphorylates S6K1. Interacts with PID, and transphosphorylation by PDK1 increases PID autophosphorylation. The mRNA is cell-to-cell mobile.","3'-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 (PDK1)","(ATPDK1);3'-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 (PDK1)"]
["AT1G05000","black","Encodes an atypical dual-speci&#64257;city phosphatase.","PLANT AND FUNGI ATYPICAL DUAL-SPECI&#64257;CITY PHOSPHATASE 1 (PFA-DSP1)","(AtPFA-DSP1);PLANT AND FUNGI ATYPICAL DUAL-SPECI&#64257;CITY PHOSPHATASE 1 (PFA-DSP1)"]
["AT4G27320","black","Contains a universal stress protein domain. Protein is phosphorylated in response to Phytophthora infestans zoospores and xylanase.","(PHOS34)","(ATPHOS34); (PHOS34); (USP21)"]
["AT5G53890","black","Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of phytosulfokine (PSK), which is a 5-aa tyrosine-sulfated peptide that primarily promotes cellular proliferation.","PHYTOSYLFOKINE-ALPHA RECEPTOR 2 (PSKR2)","(AtPSKR2);PHYTOSYLFOKINE-ALPHA RECEPTOR 2 (PSKR2)"]
["AT4G08700","black","Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.","PURINE PERMEASE 13 (PUP13)","(ATPUP13);PURINE PERMEASE 13 (PUP13)"]
["AT3G46830","black","RAB GTPase homolog A2C;(source:Araport11)","RAB GTPASE HOMOLOG A2C (RABA2c)","(ATRAB11A);RAB GTPASE HOMOLOG A2C (ATRABA2C);ARABIDOPSIS RAB GTPASE HOMOLOG A2C (ATRAB-A2C);RAB GTPASE HOMOLOG A2C (RAB-A2C);RAB GTPASE HOMOLOG A2C (RABA2c)"]
["AT5G59840","black","Ras-related small GTP-binding family protein;(source:Araport11)","(ATRABE1B)","(ATRABE1B)"]
["AT5G19855","black","Encodes a chloroplast stromal localized RbcX protein that acts as a chaperone in the folding of Rubisco.","HOMOLOGUE OF CYANOBACTERIAL RBCX 2 (RbcX2)","(AtRbcX2);HOMOLOGUE OF CYANOBACTERIAL RBCX 2 (RbcX2)"]
["AT1G54440","black","Rrp6-like protein, controls RNA-directed DNA methylation by helping with the retention of noncoding RNAs in normal cells.","RRP6-LIKE 1 (RRP6L1)","(ATRRP6L1);RRP6-LIKE 1 (RRP6L1); (AATRIMMER1)"]
["AT4G24940","black","Encodes one of the two subunits of the SUMO activation enzyme required during sumolation. Sumolation is a post-translational protein modification process similar to ubiquitination during which a polypeptide (SUMO) is covalently attached to a target protein.","SUMO-ACTIVATING ENZYME 1A (SAE1A)","(AT-SAE1-1);SUMO-ACTIVATING ENZYME 1A (ATSAE1A);SUMO-ACTIVATING ENZYME 1A (SAE1A)"]
["AT3G23660","black","Sec23/Sec24 protein transport family protein;(source:Araport11)","(ATSEC23E)","(ATSEC23E)"]
["AT3G01720","black","peptidyl serine alpha-galactosyltransferase;(source:Araport11)","(ATSERGT1)","(ATSERGT1)"]
["AT5G37890","black","Encodes an E3 protein ligase (based on a self-ubiquitination in vitro assay).","SINA LIKE 7 (SINAL7)","(ATSINAL7);SINA LIKE 7 (SINAL7)"]
["AT3G05840","black","Glycogen synthase kinase-3 member which encodes a SHAGGY-like kinase involved in meristem organization. Regulates flowering through mediating CONSTANS stability.","(ATSK12)","(ATSK12);SHAGGY-LIKE KINASE 12 (SK12)"]
["AT1G07010","black","Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11)","SHEWENELLA-LIKE PROTEIN PHOSPHATASE 1 (SLP1)","(ATSLP1);SHEWENELLA-LIKE PROTEIN PHOSPHATASE 1 (SLP1)"]
["AT5G60550","black","Encodes a geminivirus Rep interacting kinase (GRIK; GRIK1/AT3G45240, GRIK2/AT5G60550). GRIKs are SnRK1 (SNF1-related kinases) activating kinases. Both GRIKs specifically bind to the SnRK1 catalytic subunit and phosphorylate the equivalent threonine residue in its activation loop in vitro.","GEMINIVIRUS REP INTERACTING KINASE 2 (GRIK2)","(ATSNAK1);GEMINIVIRUS REP INTERACTING KINASE 2 (GRIK2)"]
["AT1G54650","black","Methyltransferase family protein;(source:Araport11)","TRNA METHYLTRANSFERASE 140B (TRM140B)","(ATTRM140B);TRNA METHYLTRANSFERASE 140B (TRM140B)"]
["AT5G17660","black","tRNA (guanine-N-7) methyltransferase;(source:Araport11)","TRNA METHYLTRANSFERASE 8B (TRM8B)","(ATTRM8B);TRNA METHYLTRANSFERASE 8B (TRM8B)"]
["AT1G45050","black","member of ubiquitin-conjugating E2-proteins","(ATUBC2-1)","(ATUBC2-1);ARABIDOPSIS THALIANA UBIQUITIN-CONJUGATING ENZYME 15 (UBC15)"]
["AT1G14360","black","UDP-galactose transporter 3;(source:Araport11)","UDP-GALACTOSE TRANSPORTER 3 (UTR3)","(ATUTR3);UDP-GALACTOSE TRANSPORTER 3 (UTR3)"]
["AT1G78080","black","Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. Role in mediating light and ethylene signaling. The mRNA is cell-to-cell mobile.","RELATED TO AP2 4 (RAP2.4)","(ATWIND1);WOUND INDUCED DEDIFFERENTIATION 1 (WIND1);RELATED TO AP2 4 (RAP2.4); (ERF59)"]
["AT1G80420","black","Encodes a component of plant break excision repair and functions at several stages during active DNA demethylation in Arabidopsis.","(ATXRCC1)","(ATXRCC1);HOMOLOG OF X-RAY REPAIR CROSS COMPLEMENTING 1 (XRCC1)"]
["AT5G41000","black","Arabidopsis thaliana metal-nicotianamine transporter YSL4","YELLOW STRIPE LIKE 4 (YSL4)","(ATYSL4);YELLOW STRIPE LIKE 4 (YSL4)"]
["AT2G32720","black","Participates with ELO2 in VLCFA synthesis.","CYTOCHROME B5 ISOFORM B (CB5-B)","(B5 #4);ARABIDOPSIS CYTOCHROME B5 ISOFORM B (ATCB5-B);CYTOCHROME B5 ISOFORM B (CB5-B); (CYTB5-D)"]
["AT1G60660","black","member of Cytochromes b5","CYTOCHROME B5-LIKE PROTEIN (CB5LP)","(B5 #5);ARABIDOPSIS CYTOCHROME B5-LIKE PROTEIN (ATCB5LP);CYTOCHROME B5-LIKE PROTEIN (CB5LP)"]
["AT3G06850","black","dihydrolipoamide branched chain acyltransferase","(BCE2)","(BCE2); (LTA1);DARK INDUCIBLE 3 (DIN3)"]
["AT4G22320","black","A subunit shared by BRM-, SYD-, and MINU1/2-associated SWI/SNF chromatin remodeling complexes. An ortholog of the human SWI/SNF subunits BCL7a/b/c.","BCL-DOMAIN HOMOLOG 1 (BDH1)","(BCL7A);BCL-DOMAIN HOMOLOG 1 (BDH1)"]
["AT2G27500","black","Encodes a glycosylphosphatidylinositol-anchored &#946;-1,3-glucanase involved in seed developement.","(BG14)","(BG14)"]
["AT2G45100","black","Cyclin/Brf1-like TBP-binding protein. Double mutants with BRF2 show defects in pollen development. Involved in regulation of thermo tolerance.","(BRF1)","(BRF1)"]
["AT5G20540","black","Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.","BREVIS RADIX-LIKE 4 (BRXL4)","(BRX-LIKE4);BREVIS RADIX-LIKE 4 (BRXL4);BREVIS RADIX-LIKE 4 (ATBRXL4)"]
["AT1G32360","black","Three CCCH zinc finger domain protein that may have a role in growth repression. Component of the m6A writer complex; HAKAI is required for the interaction between HIZ1 and MTA (mRNA adenosine methylase A).","(C3H12)","(C3H12);HAKAI-INTERACTING ZINC FINGER PROTEIN 1 (HIZ1); (ATC3H12)"]
["AT5G06830","black","Conserved reticulophagy receptor that bridges the gap betweenselective autophagy and ribosome stalling at the endoplasmic reticulum. Interacts directly with ATG8. Recruited to phagophores, precursors to autophagosomes, during ER stress in an autophagy-dependent manner. Forms a receptor complex with UFL1, the E3 ligase that mediates ufmylation, and its adaptor protein, DDRGK1.","(C53)","(C53)"]
["AT3G19450","black","Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates. The mRNA is cell-to-cell mobile.","(ATCAD4)","(CAD-C); (ATCAD4);CINNAMYL ALCOHOL DEHYDROGENASE 4 (CAD4); (CAD)"]
["AT4G26940","black","Putative beta 1,3-galactosyltransferase that acts redundantly with CAGE1 during primary and secondary cell wall biosynthesis.","(CAGE2)","(CAGE2)"]
["AT4G31000","black","Calmodulin-binding protein;(source:Araport11)","(CBP60F)","(CBP60F)"]
["AT4G32560","black","Potential retriever-interacting protein; required for root and root hair growth.","(CCDC93)","(CCDC93)"]
["AT5G43320","black","Member of CKL gene family (CKL-C group)","CASEIN KINASE I-LIKE 8 (ckl8)","(CK1.8);CASEIN KINASE I-LIKE 8 (ckl8)"]
["AT2G27960","black","catalytic subunit of cyclin dependent kinase 1. physically interact with cyclin-dependent kinases (CDKs) and play an essential, but yet not entirely resolved, role in the regulation of the cell cycle","CYCLIN-DEPENDENT KINASE-SUBUNIT 1 (CKS1)","(CKS1AT);CYCLIN-DEPENDENT KINASE-SUBUNIT 1 (CKS1)"]
["AT1G62820","black","Calcium-binding EF-hand family protein;(source:Araport11)","(CML14)","(CML14)"]
["AT3G12180","black","Cornichon family protein; ER cargo receptor; protein-protein interactions with plant vacuolar proton-translocating ATPase (V-ATPase).","(CNIH1)","(CNIH1)"]
["AT3G53400","black","Conserved peptide uORF; regulates translation of any downstream ORF in response to environmental signals heat stress and water limitation.","(CPUORF46)","(CPUORF46)"]
["AT2G35660","black","Encodes a member of a novel gene family with homology to known proteins involved in hydroxylation and oxidation of an aromatic ring.","(CTF2A)","(CTF2A)"]
["AT4G34040","black","RING/U-box superfamily protein;(source:Araport11)","MED25 BINDING RING-H2 PROTEIN 2 (MBR2)","(CTL04);MED25 BINDING RING-H2 PROTEIN 2 (MBR2)"]
["AT1G45180","black","RING/U-box superfamily protein;(source:Araport11)","(CTL05)","(CTL05)"]
["AT1G73760","black","RING/U-box superfamily protein;(source:Araport11)","(CTL14)","(CTL14)"]
["AT1G11120","black","CTTNBP 2 amino-terminal-like protein;(source:Araport11)","(DEG23)","(DEG23)"]
["AT5G62030","black","4Fe-4S-cluster protein involved in diphthamide biosynthesis, catalyzing the first committed step, as well as Dph2 to Dph7. Diphthamide contributes to the functionality of the translational machinery monitored by plants to regulate growth.","(DPH1)","(DPH1)"]
["AT4G20300","black","Serine/Threonine-kinase, putative (DUF1639);(source:Araport11)","(DUF1639)","(DUF1639)"]
["AT1G33780","black","Interacts with chloroplast chaperone CLPC1, which unfolds and delivers substrates to the stromal CLPPRT protease complex for degradation.","(DUF179-1)","(DUF179-1)"]
["AT1G78170","black","EAR (Ethylene-responsive element binding factor-associated Amphiphilic Repression) motif-containing ABA up-regulated transcription repressor which regulates ABA response together with EAU2.","(EAU1)","(EAU1)"]
["AT1G29550","black","Eukaryotic initiation factor 4E protein;(source:Araport11)","(EIF4E1B)","(EIF4E1B)"]
["AT2G32580","black","Protein of unknown function (DUF1068). Mutants are defective in cell adhesion.","(ELMO1)","(ELMO1)"]
["AT1G05070","black","transmembrane protein, putative (DUF1068);(source:Araport11)","(ELMO2)","(ELMO2)"]
["AT4G30996","black","NKS1, a plant-specific gene, encodes a 19 kDa endomembrane-localized protein. It is part of SOS independent ion homeostasis regulation pathway.","NA(+)- AND K(+)-SENSITIVE 1 (NKS1)","(ELMO4);NA(+)- AND K(+)-SENSITIVE 1 (NKS1)"]
["AT5G41130","black","Esterase/lipase/thioesterase family protein;(source:Araport11)","(ELT5)","(ELT5)"]
["AT1G71900","black","magnesium transporter, putative (DUF803);(source:Araport11)","(ENOR3L4)","(ENOR3L4)"]
["AT1G34470","black","magnesium transporter, putative (DUF803);(source:Araport11)","(ENOR3L5)","(ENOR3L5)"]
["AT4G09640","black","magnesium transporter, putative (DUF803);(source:Araport11)","(ENOR3L6)","(ENOR3L6)"]
["AT4G34640","black","Encodes squalene synthase, which converts two molecules of farnesyl diphosphate (FPP) into squalene via an intermediate: presqualene diphosphate (PSPP). It is generally thought to be one of the key enzymes of sterol biosynthesis, since it catalyzes the first pathway-specific reaction of the sterol branch of the isoprenoid pathway. The mRNA is cell-to-cell mobile.","SQUALENE SYNTHASE 1 (SQS1)","(ERG9);SQUALENE SYNTHASE 1 (SQS1)"]
["AT4G13050","black","Acyl-ACP thioesterase;(source:Araport11)","(FATA2)","(FATA2)"]
["AT2G40880","black","Encodes a protein with cysteine proteinase inhibitor activity. Overexpression increases tolerance to abiotic stressors (i.e.salt,osmotic, cold stress). The mRNA is cell-to-cell mobile.","CYSTATIN A (CYSA)","(FL3-27);CYSTATIN A (CYSA);CYSTATIN A (ATCYSA)"]
["AT3G22550","black","Enhances SnRK1 signaling and bridges the SnRK1-RAPTOR1B association; sugar-TOR signaling promotes the level of FLZ8 through histone modifications. Loss of FLZ8 leads to TOR hyperactivation and enhanced stress sensitivity.","(FLZ8)","(FLZ8)"]
["AT1G49710","black","Encodes a protein with core &alpha;1,3-fucosyltransferase activity.","FUCOSYLTRANSFERASE 12 (FUT12)","(FUCTB); (ATFUT12);FUCOSYLTRANSFERASE 12 (FUT12); (FUCT2)"]
["AT1G27120","black","Encodes a Golgi-localized hydroxyproline-O-galactosyltransferase.","(GALT4)","(GALT4)"]
["AT5G53340","black","Encodes a hydroxyproline O-galactosyltransferase; belongs to CAZy GT31, known to catalyze the addition of the first galactose residues to AGP protein backbones and enable subsequent AGP glycosylation.","HYDROXYPROLINE O-GALACTOSYLTRANSFERASE 1 (HPGT1)","(GALT7);HYDROXYPROLINE O-GALACTOSYLTRANSFERASE 1 (HPGT1)"]
["AT3G05180","black","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates.","(GGL16)","(GGL16)"]
["AT5G06270","black","One of two plant specific paralogs of unknown function. Interacts with GL2. GIR1/GIR2 loss of function resembles gl2 lof mutations","(GIR1)","(GIR1)"]
["AT2G40690","black","Encodes a putative dihydroxyacetone phosphate (DHAP) reductase involved in glycerol-3-phosphate supply within the chloroplast for synthesis of glycerolipids. Mutants have reduced levels of hexadecatrienoic acid, which is rescued by exogenous glycerol-3-phosphate. This gene appears to be involved in the flux of fatty acids in the prokaryotic glyerolipid biosynthesis pathway.","(GLY1)","(GLY1);SUPPRESSOR OF FATTY ACID DESATURASE DEFICIENCY 1 (SFD1)"]
["AT2G41540","black","Encodes a protein with NAD-dependent glycerol-3-phosphate (G3P) dehydrogenase which was shown to complement an Escherichia coli strain: BB20-14, auxotrophic for glycerol/G3P due to a loss-of-function mutation in the gpsA gene.","(GPDHC1)","(GPDHC1)"]
["AT1G12230","black","Aldolase superfamily protein;(source:Araport11)","(GSM2-LIKE)","(GSM2-LIKE)"]
["AT5G61840","black","Encodes a UDP-Xyl:beta-(1,4)-xylosyl transferase.","(GUT1)","(GUT1);IRREGULAR XYLEM 10 (IRX10-L);XYLAN SYNTHASE-1 (XYS1)"]
["AT3G48590","black","Encodes a protein with similarity to a subunit of the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5A) and expressed in vegetative and reproductive tissues.","NUCLEAR FACTOR Y, SUBUNIT C1 (NF-YC1)","(HAP5A); (ATHAP5A);NUCLEAR FACTOR Y, SUBUNIT C1 (NF-YC1)"]
["AT3G55350","black","PIF / Ping-Pong family of plant transposase;(source:Araport11)","(HHP1)","(HHP1);HARBINGER FAMILY OF PLANT TRANSPOSASE 1 (HARB1)"]
["AT5G28540","black","Encodes the luminal binding protein BiP, an ER-localized member of the HSP70 family. BiP is composed of an N-terminal ATP binding domain and a C-terminal domain that binds to hydrophobic patches on improperly/incompletely folded proteins in an ATP-dependent manner. Involved in polar nuclei fusion during proliferation of endosperm nuclei.","(BIP1)","(HSP70-11); (BIP1)"]
["AT5G42020","black","Luminal binding protein (BiP2) involved in polar nuclei fusion during proliferation of endosperm nuclei.","(HSP70-12)","(HSP70-12)"]
["AT5G59910","black","Histone superfamily protein;(source:Araport11)","(HTB4)","(HTB4)"]
["AT3G44200","black","Encodes AtNek5, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.Interacts physically with plant kinesins ARK1 and ARK2. Mutants show defects in root epidermal cell morphology, trichome branching and other epidermal cell abnormalities suggesting a rol e in epidermal cell differentiation. NEK6 co-localizes with cortical microtubules.","NIMA (NEVER IN MITOSIS, GENE A)-RELATED 6 (NEK6)","(IBO1);NIMA (NEVER IN MITOSIS, GENE A)-RELATED 6 (NEK6);NIMA-RELATED KINASE6 (ATNEK6)"]
["AT2G23430","black","Encodes a cyclin-dependent kinase inhibitor protein that functions as a negative regulator of cell division and promoter of endoreduplication. A member of seven KRP genes found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. Both SKP2b and RKP appear to be involved in the degradation of KRP1. Involved in trichome branching.","(ICK1)","(ICK1);KIP-RELATED PROTEIN 1 (KRP1)"]
["AT2G25570","black","SEL1-like repeat protein involved in plasmodesmata-mediated intercellular transport.","(ISE3)","(ISE3)"]
["AT5G06770","black","KHZ2 is a CCCH zinc-finger and KH domain protein belonging to the VII subfamily. It is expressed throughout the plant. Highly similar to KHZ1.Double mutants with khz1 are late flowering. Overexpression leads to increased rates of leaf senescence.","(KHZ2)","(KHZ2); (ATC3H52); (ATKH23)"]
["AT3G50240","black","Encodes a kinesin-related protein.","(KICP-02)","(KICP-02)"]
["AT5G15970","black","Encodes a gene that can be induced by cold and abscisic acid and may be involved in cold acclimation and salt tolerance. The mRNA is cell-to-cell mobile.","(KIN2)","(KIN2); (AtCor6.6);COLD-RESPONSIVE 6.6 (COR6.6)"]
["AT2G28060","black","Component of the regulatory subunit of SNF1-related protein kinase. As part of the regulatory complex it binds maltose which promotes kinase activity.","(KINbeta3)","(KINbeta3)"]
["AT1G24360","black","Dual mitochondrial and plastid localized b-ketoacyl- ACP reductase, a component of the fatty acid synthase complex.","(KR)","(KR)"]
["AT4G16850","black","6-transmembrane (6TM) protein that underlies a QTL for petal size with increased expression correlating to increased petal size.","(KSK)","(KSK)"]
["AT1G04690","black","potassium channel beta subunit 1;(source:Araport11)","POTASSIUM CHANNEL BETA SUBUNIT 1 (KAB1)","(KV-BETA1);POTASSIUM CHANNEL BETA SUBUNIT 1 (KAB1)"]
["AT1G10740","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)","(LDAH1)","(LDAH1)"]
["AT2G20810","black","Galacturonosyltransferase,regulator of root meristem maintenance.","GALACTURONOSYLTRANSFERASE 10 (GAUT10)","(LGT4);GALACTURONOSYLTRANSFERASE 10 (GAUT10)"]
["AT1G25570","black","Di-glucose binding protein with Leucine-rich repeat domain-containing protein;(source:Araport11)","(LLR1)","(LLR1);MALECTIN-LIKE DOMAIN (MLD)- AND LEUCINE-RICH REPEAT (LRR)-CONTAINING PROTEIN 1 (MLLR1)"]
["AT1G49430","black","Encodes a long chain acyl-CoA synthetase that catalyzes the synthesis of omega-hydroxy fatty acyl-CoA intermediates in the pathway to cutin synthesis. Required for repression of lateral root formation.","LONG-CHAIN ACYL-COA SYNTHETASE 2 (LACS2)","(LRD2);LONG-CHAIN ACYL-COA SYNTHETASE 2 (LACS2);LATERAL ROOT DEVELOPMENT 2 (LRD2)"]
["AT1G11090","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)","(MAGL1)","(MAGL1)"]
["AT5G11650","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)","(MAGL13)","(MAGL13)"]
["AT2G47630","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)","(MAGL9)","(MAGL9)"]
["AT5G52240","black","Encodes a protein with similarity to progesterone-binding proteins in animals. Has been shown to bind steroids in vitro. Expressed in aerial portions of the plant excluding mature flowers and siliques. Antisense experiments suggest a role in inhibition of hypocotyl cell elongation. Expression is suppressed light grown seedlings transferred to the dark. The mRNA is cell-to-cell mobile.","MEMBRANE STEROID BINDING PROTEIN 1 (MSBP1)","(MAPR5);MEMBRANE STEROID BINDING PROTEIN 1 (MSBP1); (ATMP1);ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED PROGESTERONE BINDING PROTEIN 5 (AtMAPR5)"]
["AT5G21105","black","Putative ascorbate oxidase with ferroxidase activity, candidate for the regulation of apoplastic iron excess.","(MCO3)","(MCO3)"]
["AT5G66650","black","Chloroplast localized mitochondrial calcium uniporter.","CHLOROPLAST-LOCALIZED MITOCHONDRIAL CALCIUM UNIPORTER (CMCU)","(MCU6);CHLOROPLAST-LOCALIZED MITOCHONDRIAL CALCIUM UNIPORTER (CMCU)"]
["AT5G45550","black","Encodes a gene product involved in both sporogenesis and gametogenesis and is required for the normal progression of megasporogenesis and microsporogenesis. Additional alleles were isolated in a screen for enhancers of PID and genetic analysis indicates a role for MOB1A in auxin mediated signaling.","MOB1-LIKE (MOB1-like)","(MOB1A);MOB1-LIKE (MOB1-like)"]
["AT5G11950","black","Encodes a member of the LOG family of cytokinin riboside 5'-monophosphate phosphoribohydrolases that function in the direct cytokinin activation pathway. The relative activity of LOG8 is lower than that of other family members.","LONELY GUY 8 (LOG8)","(MOBP2);LONELY GUY 8 (LOG8)"]
["AT5G09690","black","Transmembrane magnesium transporter. One of nine family members. Loss of function mutants exhibit poor growth under magnesium stress conditions. Splice variant AT5G09690.1 (386 aa) is a functional transporter while AT5G09690.4 (371 aa) does not have transporter activity.","MAGNESIUM TRANSPORTER 7 (MGT7)","(MRS2-7);MAGNESIUM TRANSPORTER 7 (MGT7);ARABIDOPSIS THALIANA MAGNESIUM TRANSPORTER 7 (ATMGT7)"]
["AT3G58060","black","TP8 is a tonoplast localized member of CDF family of cation transporters. It functions in roots as an Mn transporter.MTP8 transports manganese into root vacuoles of iron-deficient plants and thereby prevents inhibition of iron deficiency-induced ferric chelate reductase by manganese. In seed embryos, MTP8 is responsible for manganese and iron enrichment in the subepidermal cell layer (particularly in vit1 mutant background.)","(MTP8)","(MTP8)"]
["AT5G43900","black","Encodes a member of the type XI myosin protein family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. This protein is also involved in root hair growth and organelle trafficking. This protein interacts with RabC2a and RabD1 in a GTP-dependent manner.","MYOSIN 2 (MYA2)","(MYA11-2);MYOSIN 2 (MYA2)"]
["AT1G49010","black","Duplicated homeodomain-like superfamily protein;(source:Araport11)","(MYBS1)","(MYBS1)"]
["AT5G04370","black","A member of the Arabidopsis SABATH methyltransferase gene family. Encodes NAMT1, a methyltransferase that methylates nicotinic acid to yield methyl nicotinate.","(NAMT1)","(NAMT1)"]
["AT2G28250","black","PD-localized protein required for plasmodesmal callose deposition in response to ROS stress. Involved in callose accumulation at PD channels in either basal level or ROS-dependent manner.","(NCRK)","(NCRK)"]
["AT2G04039","black","NdhV is loosely associated with the NDH complex and is required for stabilizing NDH subcomplexes A and E.","(NDHV)","(NDHV)"]
["AT3G58600","black","Recruited in the AP-2 regulatory cycle.","(NECAP-1)","(NECAP-1)"]
["AT1G02290","black","hypothetical protein;(source:Araport11)","(NFRKB3)","(NFRKB3)"]
["AT5G18310","black","Member of the RIN4-like/NOI family; upregulated after spider mite feeding.","(NOI8)","(NOI8)"]
["AT1G67900","black","Encodes a gene homologous to the NPY family based on deep phylogeny.","(NPY8)","(NPY8)"]
["AT3G52090","black","Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB11 and the E. oli RNA polymerase alpha subunit.","(NRPB11)","(NRPB11)"]
["AT5G21140","black","Encodes a nuclear localized, structural subunit of the SMC 5/6 complex and a non- SMC element. Loss of function results in abnormal cell division and embryo lethality. Analysis of partially rescued lines indicates a role in double strand break DNA repair. Similar phenotype to NSE3 which it also interacts with. Maintains cell viability together with NSE3 during early embryogenesis.","EMBRYO DEFECTIVE 1379 (emb1379)","(NSE1);EMBRYO DEFECTIVE 1379 (emb1379)"]
["AT1G07640","black","A member of the DOF transcription factors. Prominently expressed in the phloem of leaves and other organs. Expression is induced by wounding, MeJA and insect feeding. Upregulates glucosinolate biosynthesis. PEAR protein involved in the formation of a short-range concentration gradient that peaks at protophloem sieve elements, and activates gene expression that promotes radial growth. Locally promotes transcription of inhibitory HD-ZIP III genes, and thereby establishes a negative-feedback loop that forms a robust boundary that demarks the zone of cell division.","(OBP2)","(OBP2);UAS-TAGGED ROOT PATTERNING3 (URP3)"]
["AT2G34050","black","Encodes an F-type ATP Synthase Assembly factor that binds to beta subunits of mATPase and cpATPases.","(P11)","(P11)"]
["AT5G14710","black","proteasome assembly chaperone-like protein;(source:Araport11)","(PBAC3)","(PBAC3)"]
["AT3G27430","black","Encodes 20S proteasome beta subunit PBB1 (PBB1).","(PBB1)","(PBB1)"]
["AT3G60820","black","Encodes 20S proteasome beta subunit PBF1 (PBF1).","(PBF1)","(PBF1)"]
["AT4G32730","black","Encodes a putative c-myb-like transcription factor with three MYB repeats. Part of the TSO1-MYB3R1 transcriptional module that controls the number and size of the stem cell pools at the shoot apex and root tip; the TSO1-MYB3R1 module is integrated with the cell cycle machinery to control cell division at the shoot meristem.","(PC-MYB1)","(PC-MYB1);MYB DOMAIN PROTEIN 3R1 (MYB3R-1); (ATMYB3R-1);A. THALIANA MYB DOMAIN PROTEIN 3R1 (ATMYB3R1);C-MYB-LIKE TRANSCRIPTION FACTOR 3R-1 (MYB3R1)"]
["AT1G11820","black","Plasmodesmata-localized &#946;-1,3-glucanase which regulates leaf trichome length.","(PDBG4)","(PDBG4)"]
["AT4G01900","black","encodes a PII protein that may function as part of a signal transduction network involved in perceiving the status of carbon and organic nitrogen. Forms a protein complex with N-acetylglutamate kinase and regulates the kinase activity by relieving the feedback inhibition of the kinase by arginine. Regulates acetyl-CoA carboxylase activity.","GLNB1 HOMOLOG (GLB1)","(PII);GLNB1 HOMOLOG (GLB1)"]
["AT1G60890","black","Phosphatidylinositol 4-phosphate 5-kinase","(PIP5K8)","(PIP5K8)"]
["AT5G47750","black","D6PK family kinase involved in pulse-induced phototropism and continuous light-induced hypocotyl phototropism, minor contribution to time-dependent phototropism.","D6 PROTEIN KINASE LIKE 2 (D6PKL2)","(PK5);D6 PROTEIN KINASE LIKE 2 (D6PKL2)"]
["AT5G01810","black","Encodes a CBL-interacting serine/threonine protein kinase, also has similarities to SOS2 kinase.","CBL-INTERACTING PROTEIN KINASE 15 (CIPK15)","(PKS3);PROTEIN KINASE 10 (ATPK10);CBL-INTERACTING PROTEIN KINASE 15 (CIPK15);SNF1-RELATED PROTEIN KINASE 3.1 (SNRK3.1);SOS3-INTERACTING PROTEIN 2 (SIP2);SMALL AND BASIC INTRINSIC PROTEIN 2 (SIP2)"]
["AT2G06925","black","Encodes a secretory phospholipase A2 enzyme, which specifically hydrolyzes the sn-2 position of phospholipids. The enzyme has a preference towards linoleoyl acyl chain over palmitoyl acyl chain. It also has a slight preference for phosphatidylcholine over phosphatidylethanolamine.","(PLA2-ALPHA)","(PLA2-ALPHA);PHOSPHOLIPASE A2-ALPHA (ATSPLA2-ALPHA)"]
["AT4G17900","black","PLATZ transcription factor family protein;(source:Araport11)","(PLATZ11)","(PLATZ11)"]
["AT5G56450","black","Mitochondrial substrate carrier family protein;(source:Araport11)","(PM-ANT)","(PM-ANT)"]
["AT5G19730","black","Required for ABA-mediated stomatal function and heat response.","(PME53)","(PME53)"]
["AT5G09760","black","Pectin methylesterase inhibitor; INVI-PMEI protein isoform which clustered with a PME.","(PMEI-PME51)","(PMEI-PME51)"]
["AT5G64640","black","Pectin methylesterase inhibitor; INVI-PMEI protein isoform which clustered with a PME.","(PMEI-PME94)","(PMEI-PME94)"]
["AT1G65920","black","Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain. PRAF/RLD family member.","(PRAF1)","(PRAF1)"]
["AT2G05260","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)","(PRLIP3)","(PRLIP3)"]
["ATCG00350","black","Encodes psaA protein comprising the reaction center for photosystem I along with psaB protein; hydrophobic protein encoded by the chloroplast genome.","(PSAA)","(PSAA)"]
["ATCG00340","black","Encodes the D1 subunit of photosystem I reaction center.","(PSAB)","(PSAB)"]
["AT3G49060","black","Plant U-box type E3 ubiquitin ligase (PUB).","(PUB32)","(PUB32)"]
["AT4G36550","black","Plant U-box type E3 ubiquitin ligase (PUB).","(PUB5)","(PUB5)"]
["AT3G05230","black","Signal peptidase subunit;(source:Araport11)","(PUB63)","(PUB63)"]
["AT4G28950","black","A member of ROP GTPase gene family.","RHO-RELATED PROTEIN FROM PLANTS 9 (ROP9)","(RAC7);ARABIDOPSIS RAC-LIKE 7 (ARAC7); (ATROP9); (ATRAC7);RHO-RELATED PROTEIN FROM PLANTS 9 (ROP9)"]
["AT1G67890","black","Encodes a protein with similarity to RAF MAP kinases. Based on loss of function phenotype, RAF11 appears to be involved in mediating ABA responses such as dormancy and environmental stress. Expressed in most plant tissues but excluded from root tips and young leaves.","(RAF11)","(RAF11)"]
["AT1G04700","black","Raf-like kinase required for stomatal vapor pressure difference response.","(RAF16)","(RAF16)"]
["AT5G01770","black","Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutations in this gene have no visible effects on embryo or plant development.","RAPTOR2 (RAPTOR2)","(RAPTOR1A);RAPTOR2 (RAPTOR2); (ATRAPTOR1A)"]
["AT1G05260","black","Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings. The mRNA is cell-to-cell mobile.","RARE COLD INDUCIBLE GENE 3 (RCI3)","(RCI3A);PEROXIDASE 3 (PER3);RARE COLD INDUCIBLE GENE 3 (RCI3)"]
["AT4G16190","black","Member of the papain-like cysteine proteases known for its participation in anther development after its maturation by ?VPE (vacuolar processing enzyme), interacts with SBP1 (selenium binding protein 1).","(RD19C)","(RD19C)"]
["AT1G76440","black","HSP20-like chaperones superfamily protein;(source:Araport11)","(RDS2)","(RDS2)"]
["AT5G19390","black","Encodes a protein with similarity to REN1, a Rho GTPase activating protein.It is cytoplasmic and plasma membrane associated in interphase, but during mitosis localizes to the CDZ/CDS in a POK-dependent manner.","(PHGAP2)","(REN3); (PHGAP2)"]
["AT3G02250","black","O-fucosyltransferase family protein;(source:Araport11)","(RRT2)","(RRT2)"]
["AT2G25420","black","WD40 domain protein which interacts with ROS1 in the base excision repair pathway through DNA methylation.","(RWD40)","(RWD40)"]
["AT4G08685","black","Encodes a protein, expressed in leaves, with similarity to pollen allergens. The mRNA is cell-to-cell mobile.","(SAH7)","(SAH7)"]
["AT4G00150","black","Belongs to one of the LOM (LOST MERISTEMS) genes: AT2G45160 (LOM1), AT3G60630 (LOM2) and AT4G00150 (LOM3). LOM1 and LOM2 promote cell differentiation at the periphery of shoot meristems and help to maintain their polar organization.","HAIRY MERISTEM 3 (HAM3)","(SCL6-IV);HAIRY MERISTEM 3 (HAM3);ARABIDOPSIS THALIANA HAIRY MERISTEM 3 (ATHAM3);LOST MERISTEMS 3 (LOM3)"]
["AT1G71820","black","Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.","(SEC6)","(SEC6)"]
["AT5G50460","black","Subunit of SEC61 translocon.","(SEC61GAMMA)","(SEC61GAMMA)"]
["AT3G54690","black","Sugar isomerase (SIS) family protein;(source:Araport11)","(SETH3)","(SETH3)"]
["AT5G54840","black","Monomeric G protein. Expressed in the root quiescent center, flowers, and leaf guard cells and hydathodes.","(SGP1)","(SGP1); (ATSGP1)"]
["AT3G04090","black","Belongs to a family of plant aquaporins. Similar to yeast and radish aquaporins. Located on ER.","SMALL AND BASIC INTRINSIC PROTEIN 1A (SIP1A)","(SIP1;1);SMALL AND BASIC INTRINSIC PROTEIN 1A (SIP1A)"]
["AT1G51745","black","Tudor/PWWP/MBT superfamily protein;(source:Araport11)","(SL1)","(SL1);PRO-TRP-PRO-TRP PROTEIN 2 (PWWP2)"]
["AT3G11500","black","Small nuclear ribonucleoprotein family protein;(source:Araport11)","(SMGB)","(SMGB)"]
["AT5G02420","black","cyclin-dependent kinase inhibitor SMR3-like protein;(source:Araport11)","(SMR3)","(SMR3)"]
["AT5G63650","black","encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.","SNF1-RELATED PROTEIN KINASE 2.5 (SNRK2.5)","(SNRK2-5);SNF1-RELATED PROTEIN KINASE 2.5 (SNRK2.5);SNF1-RELATED PROTEIN KINASE 2H (SRK2H)"]
["AT5G08565","black","Transcription initiation Spt4-like protein;(source:Araport11)","(SPT4-1)","(SPT4-1)"]
["AT3G04380","black","Encodes SUVR4, a nucleolar histone methyltransferase with preference for monomethylated H3K9. One of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain.","(SUVR4)","(SUVR4);SET DOMAIN PROTEIN 31 (SDG31)"]
["AT2G30880","black","Pleckstrin homology (PH) domain-containing protein;(source:Araport11)","(SWAP70)","(SWAP70); (ATSWAP70)"]
["AT3G48740","black","Encodes a member of the SWEET sucrose efflux transporter family proteins.","(SWEET11)","(SWEET11); (AtSWEET11)"]
["AT5G23660","black","Encodes a member of the SWEET sucrose efflux transporter family proteins.","(SWEET12)","(SWEET12);HOMOLOG OF MEDICAGO TRUNCATULA MTN3 (MTN3); (AtSWEET12)"]
["AT3G17185","black","Encodes a trans-acting siRNA (tasi-RNA) that regulates the expression of auxin response factor genes (ARF2, ARF4, ETT). One of 3 genomic loci that encode the TAS3 siRNA. Has been identified as a translated small open reading frame by ribosome profiling.","TRANS-ACTING SIRNA3 (TAS3)","(TASIR-ARF);SHORT OPEN READING FRAME 24 (SORF24); (ATTAS3);TRANS-ACTING SIRNA3 (TAS3)"]
["AT5G54750","black","Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.","(TRAPPC3)","(TRAPPC3)"]
["AT5G02280","black","Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.","(TRAPPC4)","(TRAPPC4)"]
["AT5G52030","black","TraB family protein;(source:Araport11)","(TRB3)","(TRB3)"]
["AT5G16280","black","Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.","(TRAPPC8)","(TRS85); (TRAPPC8)"]
["AT2G41160","black","ATI3A interacting protein containing a large N-terminal rhomboid-like transmembrane domain and a UBA domain at their C terminus, localized in the ER with a role in plant heat tolerance. UBAC2 proteins may act as both cargo receptors and inducers of an ATI3-mediated selective autophagy pathway, where ATI3 and UBAC2 proteins are delivered to the vacuole under ER stress in an autophagy-dependent manner.","(UBAC2B)","(UBAC2B)"]
["AT1G67250","black","20S proteasome maturation factor.","(UMP1A)","(UMP1A)"]
["AT5G04160","black","UUAT1 is a UDP-Uronic acid transporter that is localized to the Golgi. It is expressed in the seed coat epidermis and is involved in the development of seed coat mucilage.","(UUAT1)","(UUAT1)"]
["AT5G47180","black","Plant VAMP (vesicle-associated membrane protein) family protein;(source:Araport11)","(VAP27-4)","(VAP27-4)"]
["AT4G24060","black","Plant-specific Dof transcription factor which regulates vascular cell di#erentiation and lignin biosynthesis.","(VDOF1)","(VDOF1); (DOF4.6)"]
["AT2G25610","black","ATPase, F0/V0 complex, subunit C protein;(source:Araport11)","(VHA-C\")","(VHA-C\")"]
["AT5G55290","black","Member of V-ATPase family. Vacuolar-type H + -ATPase (V-ATPase) is a multisubunit proton pump located on the endomembranes.","(VHA-E1)","(VHA-E1)"]
["AT1G50360","black","member of Myosin-like proteins","(VIIIA)","(VIIIA);MYOSIN VIII A (ATVIIIA)"]
["AT5G44560","black","SNF7 family protein;(source:Araport11)","(VPS2.2)","(VPS2.2)"]
["AT4G27040","black","EAP30/Vps36 family protein;(source:Araport11)","(VPS22)","(VPS22)"]
["AT3G10640","black","SNF7 family protein;(source:Araport11)","(VPS60.1)","(VPS60.1)"]
["AT2G40860","black","protein kinase family protein / protein phosphatase 2C ( PP2C) family protein;(source:Araport11)",null,"(VTC3);VITAMIN C DEFECTIVE 3 (VTC3)"]
["AT5G39220","black","Envelope-localized, alpha/beta hydrolase (ABH) involved in tocopherol synthesis specifically in seeds of Arabidopsis but potentially other tissues in other species.","(VTE7)","(VTE7)"]
["AT1G29170","black","Encodes a member of the SCAR family.These proteins are part of a complex (WAVE) complex.The SCAR subunit activates the ARP2/3 complex which in turn act as a nucleator for actin filaments.","(WAVE2)","(WAVE2);WASP (WISKOTT-ALDRICH SYNDROME PROTEIN)-FAMILY VERPROLIN HOMOLOGOUS PROTEIN 2 (AtSCAR3); (SCAR3)"]
["AT2G28200","black","C2H2-type zinc finger family protein;(source:Araport11)","(ZAT5)","(ZAT5)"]
["AT5G12950","black","GH127 domain comtianing protein that is similar to beta-L- arabinofuranosidases.","&#61538;-L-ARABINOFURANOSIDASE 1 (PAF1)","&#61538;-L-ARABINOFURANOSIDASE 1 (PAF1)"]
["AT1G77440","black","Encodes beta subunit of 20s proteosome complex which is involved in protein degradation.","20S PROTEASOME BETA SUBUNIT C2 (PBC2)","20S PROTEASOME BETA SUBUNIT C2 (PBC2)"]
["AT1G56450","black","20S proteasome beta subunit PBG1 (PBG1) mRNA, complete cds","20S PROTEASOME BETA SUBUNIT G1 (PBG1)","20S PROTEASOME BETA SUBUNIT G1 (PBG1); (MUD1)"]
["AT2G17370","black","Encodes a 3-hydroxy-3-methylglutaryl-CoA reductase (HMGR) that is involved in the synthesis of sterol and triterpenoid compounds.","3-HYDROXY-3-METHYLGLUTARYL-COA REDUCTASE 2 (HMG2)","3-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASE 2 (HMGR2);3-HYDROXY-3-METHYLGLUTARYL-COA REDUCTASE 2 (HMG2)"]
["AT5G46290","black","Encodes beta-ketoacyl-[acyl carrier protein] synthase I (KASI). Crucial for fatty acid synthesis. Plays a role in chloroplast division and embryo development.","3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I (KASI)","3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE I (KASI)"]
["AT1G62640","black","3-ketoacyl-acyl carrier protein synthase III (KAS III)","3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III (KAS III)","3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III (KAS III)"]
["AT2G26640","black","Encodes KCS11, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","3-KETOACYL-COA SYNTHASE 11 (KCS11)","3-KETOACYL-COA SYNTHASE 11 (KCS11)"]
["AT4G34250","black","Encodes KCS16, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","3-KETOACYL-COA SYNTHASE 16 (KCS16)","3-KETOACYL-COA SYNTHASE 16 (KCS16)"]
["AT2G15090","black","Encodes KCS8, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). The mRNA is cell-to-cell mobile.","3-KETOACYL-COA SYNTHASE 8 (KCS8)","3-KETOACYL-COA SYNTHASE 8 (KCS8)"]
["AT1G04710","black","EC2.3.1.16 thiolase. Its transcript levels change after inducing MUTE expression in a mute background.","PEROXISOMAL 3-KETOACYL-COA THIOLASE 4 (PKT4)","3-KETO-ACYL-COA THIOLASE 1 (KAT1);PEROXISOMAL 3-KETOACYL-COA THIOLASE 4 (PKT4)"]
["AT5G48880","black","Encodes a peroxisomal 3-keto-acyl-CoA thiolase 2 precursor. EC2.3.1.16 thiolases. AT5G48880.1 is named PKT1 and AT5G48880.2 is named PKT2.","3-KETO-ACYL-COENZYME A THIOLASE 5 (KAT5)","3-KETO-ACYL-COENZYME A THIOLASE 5 (KAT5);PEROXISOMAL 3-KETO-ACYL-COA THIOLASE 2 (PKT2)"]
["AT3G10540","black","master regulator of AGC kinases","3'-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 2 (PDK2)","3'-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 2 (PDK2)"]
["AT1G48860","black","5-enolpyruvylshikimate-3-phosphate synthase involved in shikimic acid biosynthesis.","5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE SYNTHASE (EPSPS)","5-ENOLPYRUVYLSHIKIMATE-3-PHOSPHATE SYNTHASE (EPSPS)"]
["AT3G02360","black","6-phosphogluconate dehydrogenase family protein;(source:Araport11)","6-PHOSPHOGLUCONATE DEHYDROGENASE 2 (PGD2)","6-PHOSPHOGLUCONATE DEHYDROGENASE 2 (PGD2)"]
["AT3G49360","black","Encodes a cytosolic 6-phosphogluconolactonase (PGL) thought to be involved in the oxidative pentose-phosphate pathway (OPPP).","6-PHOSPHOGLUCONOLACTONASE 2 (PGL2)","6-PHOSPHOGLUCONOLACTONASE 2 (PGL2)"]
["AT5G24400","black","Encodes a protein with 6-phosphoglucunolactonase activity that localizes to the chloroplasts and the peroxisome. However, mutant phenotypes observed in pgl3 mutant plants can be complemented with a chloroplast-targeted version of the protein. PGL3 likely functions in the oxidative branch of the pentose phosphate pathway. pgl3 mutant phenotypes suggest that it is important in pathogen defense and maintenance of cellular redox homeostasis.","EMBRYO DEFECTIVE 2024 (emb2024)","6-PHOSPHOGLUCONOLACTONASE 3 (PGL3);EMBRYO DEFECTIVE 2024 (emb2024)"]
["AT1G04620","black","Encodes a 7-hydroxymethyl chlorophyll a reductase, an enzyme of the chlorophyll cycle that converts 7-hydroxymethyl chlorophyll a to chlorophyll a.","7-HYDROXYMETHYL CHLOROPHYLL A (HMCHL) REDUCTASE (HCAR)","7-HYDROXYMETHYL CHLOROPHYLL A (HMCHL) REDUCTASE (HCAR)"]
["AT4G39390","black","Encodes a golgi localized nucleotide sugar transporter.","NUCLEOTIDE SUGAR TRANSPORTER-KT 1 (NST-K1)","A. THALIANA NUCLEOTIDE SUGAR TRANSPORTER-KT 1 (ATNST-KT1);NUCLEOTIDE SUGAR TRANSPORTER-KT 1 (NST-K1);UDP-RHA/UDP-GAL TRANSPORTER 4 (URGT4)"]
["AT1G52340","black","Encodes a cytosolic short-chain dehydrogenase/reductase involved in the conversion of xanthoxin to ABA-aldehyde during ABA biosynthesis. Mutants are insensitive to sucrose and glucose.","ABA DEFICIENT 2 (ABA2)","ABA DEFICIENT 2 (ABA2);SUGAR-INSENSITIVE 4 (SIS4);GLUCOSE INSENSITIVE 1 (GIN1);SHORT-CHAIN DEHYDROGENASE REDUCTASE 1 (SDR1);IMPAIRED SUCROSE INDUCTION 4 (ISI4);SALT RESISTANT 1 (SRE1);ARABIDOPSIS THALIANA ABA DEFICIENT 2 (ATABA2);SHORT-CHAIN DEHYDROGENASE/REDUCTASE 1 (ATSDR1)"]
["AT1G49450","black","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)","ABA-INDUCED WD40 REPEAT 2 (AIW2)","ABA-INDUCED WD40 REPEAT 2 (AIW2)"]
["AT3G56850","black","Encodes an ABA-responsive element binding protein with a bZIP domain. Located in the nucleus and expressed in the embryo during seed maturation.","ABA-RESPONSIVE ELEMENT BINDING PROTEIN 3 (AREB3)","ABA-RESPONSIVE ELEMENT BINDING PROTEIN 3 (AREB3); (DPBF3)"]
["AT1G66900","black","Encodes a de-S-acylation enzyme which specifically reduces protein S-acylation levels of five immunity-related proteins.","ABHD17 (ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN 17)-LIKE ACYL PROTEIN THIOESTERASE 7 (ABAPT7)","ABHD17 (ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN 17)-LIKE ACYL PROTEIN THIOESTERASE 7 (ABAPT7)"]
["AT1G68810","black","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)","ABNORMAL SHOOT 5 (ABS5)","ABNORMAL SHOOT 5 (ABS5);TMO5-LIKE1 (T5L1)"]
["AT5G51290","black","Encodes a ceramide kinase that plays a role in modulating cell death.","ACCELERATED CELL DEATH 5 (ACD5)","ACCELERATED CELL DEATH 5 (ACD5)"]
["AT4G25650","black","Similar to ACD1. Leaves of antisense ACD1-like plants turn yellow in darkness like wild-type whereas antisense ACD1 plants remain dark after five days of dark treatment.","ACD1-LIKE (ACD1-LIKE)","ACD1-LIKE (ACD1-LIKE);PROTOCHLOROPHYLLIDE-DEPENDENT TRANSLOCON COMPONENT, 52 KDA (PTC52);TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS, 55 KDA - IV (TIC55-IV)"]
["AT5G35360","black","Encodes biotin carboxylase subunit (CAC2).","ACETYL CO-ENZYME A CARBOXYLASE BIOTIN CARBOXYLASE SUBUNIT (CAC2)","ACETYL CO-ENZYME A CARBOXYLASE BIOTIN CARBOXYLASE SUBUNIT (CAC2)"]
["AT2G38040","black","encodes the carboxyltransferase alpha subunit of acetyl-CoA carboxylase, involved in de novo fatty acid biosynthesis","ACETYL CO-ENZYME A CARBOXYLASE CARBOXYLTRANSFERASE ALPHA SUBUNIT (CAC3)","ACETYL CO-ENZYME A CARBOXYLASE CARBOXYLTRANSFERASE ALPHA SUBUNIT (CAC3)"]
["AT4G22780","black","Member of a family of ACT domain containing proteins . ACT domains are involved in amino acid binding .","ACT DOMAIN REPEAT 7 (ACR7)","ACT DOMAIN REPEAT 7 (ACR7)"]
["AT1G12420","black","ACT domain repeat 8;(source:Araport11)","ACT DOMAIN REPEAT 8 (ACR8)","ACT DOMAIN REPEAT 8 (ACR8)"]
["AT3G53750","black","Member of the Actin gene family. Expressed in mature pollen.","ACTIN 3 (ACT3)","ACTIN 3 (ACT3)"]
["AT5G59880","black","Encodes actin depolymerizing factor 3 (ADF3).","ACTIN DEPOLYMERIZING FACTOR 3 (ADF3)","ACTIN DEPOLYMERIZING FACTOR 3 (ADF3)"]
["AT2G31200","black","Encodes actin depolymerizing factor 6 (ADF6). The mRNA is cell-to-cell mobile.","ACTIN DEPOLYMERIZING FACTOR 6 (ADF6)","ACTIN DEPOLYMERIZING FACTOR 6 (ADF6); (ATADF6)"]
["AT1G20560","black","acyl activating enzyme 1;(source:Araport11)","ACYL ACTIVATING ENZYME 1 (AAE1)","ACYL ACTIVATING ENZYME 1 (AAE1)"]
["AT1G54580","black","encodes an acyl carrier protein expressed in leaves, roots, and dry seeds. Gene expression is not regulated by light but downregulated by starvation and upregulated by increased level of exogenous sucrose. The mRNA is cell-to-cell mobile.","ACYL CARRIER PROTEIN 2 (ACP2)","ACYL CARRIER PROTEIN 2 (ACP2); (ATACP2)"]
["AT3G02630","black","One of seven acyl acyl carrier proteins. Expressed primarily in developing seeds.Involved in fatty acid metabolism. Redundant &#916;9 stearoyl-ACP desaturase gene which together with FAB2 and AAD1 during embryo development provide precursors for the elaboration of embryo cuticle and therefore plays a specific role during the phase of invasive embryo growth through the endosperm. Together with FAB2, AAD5, and AAD6 redundantly participates in oil storage during the maturation phase.","ACYL?ACYL CARRIER PROTEIN (ACP) DESATURASE 5 (AAD5)","ACYL?ACYL CARRIER PROTEIN (ACP) DESATURASE 5 (AAD5)"]
["AT5G16240","black","Redundant &#916;9 stearoyl-ACP desaturase gene which together with FAB2 and AAD5 during embryo development provide precursors for the elaboration of embryo cuticle and therefore plays a specific role during the phase of invasive embryo growth through the endosperm. Together with FAB2, AAD5, and AAD6 redundantly participates in oil storage during the maturation phase.","ACYL-ACYL CARRIER PROTEIN DESATURASE1 (AAD1)","ACYL-ACYL CARRIER PROTEIN DESATURASE1 (AAD1)"]
["AT1G31812","black","Acyl-CoA-binding protein. Bind acyl-CoA esters and protect acyl-CoAs from degradation by microsomal acyl-hydrolases. Plays a role in determining seed oil content.","ACYL-COA-BINDING PROTEIN 6 (ACBP6)","ACYL-COA-BINDING PROTEIN 6 (ACBP6); (ATACBP6);ACYL-COA-BINDING PROTEIN (ACBP)"]
["AT1G68260","black","Thioesterase superfamily protein;(source:Araport11)","ACYL-LIPID THIOESTERASE 3 (ALT3)","ACYL-LIPID THIOESTERASE 3 (ALT3)"]
["AT5G11160","black","adenine phosphoribosyltransferase 5;(source:Araport11)","ADENINE PHOSPHORIBOSYLTRANSFERASE 5 (APT5)","ADENINE PHOSPHORIBOSYLTRANSFERASE 5 (APT5)"]
["AT5G19220","black","Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL1 is the major large subunit isoform present in leaves. Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions.","ADP GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 1 (APL1)","ADP GLUCOSE PYROPHOSPHORYLASE 2 (ADG2);ADP GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 1 (APL1)"]
["AT5G67560","black","A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. Possible pseudogene because it lacks an N-terminal part that is conserved among the other ARL8 proteins. The mRNA is cell-to-cell mobile.","ADP-RIBOSYLATION FACTOR-LIKE A1D (ARLA1D)","ADP-RIBOSYLATION FACTOR-LIKE 8B (ARL8B);ADP-RIBOSYLATION FACTOR-LIKE A1D (ARLA1D);ADP-RIBOSYLATION FACTOR-LIKE A1D (ATARLA1D)"]
["AT3G57230","black","MADS-box transcription factor. Expressed in leaf, root and stem, with higher RNA accumulation in guard cells and trichomes. AGL16 can directly interact with SVP and indirectly interact with FLC. Furthermore, the accumulation of AGL16 transcripts is modulated by miR824 (AT4G24415). The flowering time effect for the miR824/AGL16 module is more obvious in the Col-FRI background than in the Col-0 background. AGL16 controls flowering via an allelic dosage effect in long-day non-vernalized conditions.AGL16 binds to promoters of over 2000 genes with CArG-box motifs. Forms a complex with SOC1 and regulates its expression,=.","AGAMOUS-LIKE 16 (AGL16)","AGAMOUS-LIKE 16 (AGL16)"]
["AT1G22590","black","AGAMOUS-like 87;(source:Araport11)","AGAMOUS-LIKE 87 (AGL87)","AGAMOUS-LIKE 87 (AGL87)"]
["AT2G47230","black","Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. H3K9me2-binding protein which limits DNA methylation and transcriptional gene silencing.","DOMAIN OF UNKNOWN FUNCTION 724 6 (DUF6)","AGENET DOMAIN CONTAINING PROTEIN 3 (AGDP3);DOMAIN OF UNKNOWN FUNCTION 724 6 (DUF6)"]
["AT5G08170","black","porphyromonas-type peptidyl-arginine deiminase family protein;(source:Araport11)","EMBRYO DEFECTIVE 1873 (EMB1873)","AGMATINE IMINOHYDROLASE (ATAIH);EMBRYO DEFECTIVE 1873 (EMB1873)"]
["AT1G79450","black","ALA-interacting subunit 5;(source:Araport11)","ALA-INTERACTING SUBUNIT 5 (ALIS5)","ALA-INTERACTING SUBUNIT 5 (ALIS5)"]
["AT2G38400","black","alanine:glyoxylate aminotransferase 2 homolog (AGT3) mRNA,","ALANINE:GLYOXYLATE AMINOTRANSFERASE 3 (AGT3)","ALANINE:GLYOXYLATE AMINOTRANSFERASE 3 (AGT3)"]
["AT3G66658","black","Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures.","ALDEHYDE DEHYDROGENASE 22A1 (ALDH22a1)","ALDEHYDE DEHYDROGENASE 22A1 (ALDH22a1)"]
["AT4G04955","black","Encodes an allantoinase which is involved in allantoin degradation and assimilation. Gene expression was induced when allantoin was added to the medium. The insertion mutant, ataln m2-1, did not grow well on the MS medium where allantoin, instead of ammonium nitrate, was supplied.","ALLANTOINASE (ALN)","ALLANTOINASE (ATALN);ALLANTOINASE (ALN)"]
["AT4G10030","black","Alpha/beta hydrolase domain containing protein involved in lipid biosynthesis.","ALPHA/BETA HYDROLASE DOMAIN 11 (ABHD11)","ALPHA/BETA HYDROLASE DOMAIN 11 (ABHD11)"]
["AT1G69830","black","Encodes a plastid-localized &#945;-amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation. Expression follows circadian rhythms.","ALPHA-AMYLASE-LIKE 3 (AMY3)","ALPHA-AMYLASE-LIKE 3 (AMY3);ALPHA-AMYLASE-LIKE 3 (ATAMY3)"]
["AT1G73680","black","Encodes an alpha dioxygenase. Recombinant protein catalyzes the conversion of a wide range of fatty acids into 2(R)-hydroperoxy derivatives.","ALPHA DIOXYGENASE (ALPHA DOX2)","ALPHA-DIOXYGENASE 2 (alpha-DOX2);ALPHA DIOXYGENASE (ALPHA DOX2)"]
["AT2G40475","black","hypothetical protein;(source:Araport11)","ALTERED SEED GERMINATION 8 (ASG8)","ALTERED SEED GERMINATION 8 (ASG8)"]
["AT1G25480","black","Encodes a phosphorylation-dependent anion channel that can mediate malate release from the vacuole and is required for stomatal closure in response to abscisic acid.","ALUMINIUM ACTIVATED MALATE TRANSPORTER 4 (ALMT4)","ALUMINIUM ACTIVATED MALATE TRANSPORTER 4 (ALMT4)"]
["AT1G58360","black","Encodes AAP1 (amino acid permease 1), a neutral amino acid transporter expressed in seeds. Functions in amino acid uptake into embryos. The transporter also functions in acquisition of glutamate and neutral amino acids by the root.","AMINO ACID PERMEASE 1 (AAP1)","AMINO ACID PERMEASE 1 (AAP1);NEUTRAL AMINO ACID TRANSPORTER 2 (NAT2); (ATAAP1)"]
["AT1G44100","black","amino acid permease 5","AMINO ACID PERMEASE 5 (AAP5)","AMINO ACID PERMEASE 5 (AAP5)"]
["AT4G33090","black","encodes an aminopeptidase, a ortholog of mouse microsomal AP (EC 3.4.11.2).","AMINOPEPTIDASE M1 (APM1)","AMINOPEPTIDASE M1 (APM1);AMINOPEPTIDASE M1 (ATAPM1)"]
["AT5G04930","black","Encodes a putative aminophospholipid translocase (p-type ATPase) involved in chilling response. It is targeted to the plasma membrane following association in the endoplasmic reticulum with an ALIS protein beta-subunit. The mRNA is cell-to-cell mobile.","AMINOPHOSPHOLIPID ATPASE 1 (ALA1)","AMINOPHOSPHOLIPID ATPASE 1 (ALA1)"]
["AT1G26130","black","ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11)","AMINOPHOSPHOLIPID ATPASE 12 (ALA12)","AMINOPHOSPHOLIPID ATPASE 12 (ALA12)"]
["AT1G72700","black","ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11)","AMINOPHOSPHOLIPID ATPASE 5 (ALA5)","AMINOPHOSPHOLIPID ATPASE 5 (ALA5)"]
["AT2G29650","black","Encodes an inorganic phosphate transporter (PHT4;1) that is localized to the thylakoid membrane.","PHOSPHATE TRANSPORTER 4;1 (PHT4;1)","ANION TRANSPORTER 1 (ANTR1);PHOSPHATE TRANSPORTER 4;1 (PHT4;1)"]
["AT5G24500","black","fantom protein;(source:Araport11)","ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 2 (ALP2)","ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 2 (ALP2)"]
["AT1G60070","black","Gamma subunit 1 of AP-1 adaptor protein complex.","AP-1 COMPLEX GAMMA SUBUNIT 1 (AP1G1)","AP-1 COMPLEX GAMMA SUBUNIT 1 (AP1G1)"]
["AT3G48425","black","DNAse I-like superfamily protein;(source:Araport11)","APEX1-LIKE PROTEIN (APE1L)","APEX1-LIKE PROTEIN (APE1L)"]
["AT3G04080","black","Encodes an Golgi-localized integral membrane enzyme with nucleoside diphosphate activity that when mutated in combination with ATAPY2 causes a complete inhibition of pollen germination.With respect to substrate specificity, APY1 shows the following preferences UTP>IDP>GDP.","APYRASE 1 (APY1)","APYRASE 1 (ATAPY1);APYRASE 1 (APY1)"]
["AT4G09550","black","Encodes a gamma-tubulin complex protein that plays a role in gamma-tubulin complex localization, spindle stability and chromosomal segregation.","ATGCP3 INTERACTING PROTEIN 1 (GIP1)","ARABIDOPSIS ATGCP3 INTERACTING PROTEIN 1 (ATGIP1);ATGCP3 INTERACTING PROTEIN 1 (GIP1);GCP3-INTERACTING PROTEIN 1A (GIP1A)"]
["AT5G67470","black","formin homolog 6;(source:Araport11)","FORMIN HOMOLOG 6 (FH6)","ARABIDOPSIS FORMIN HOMOLOG 6 (ATFH6);FORMIN HOMOLOG 6 (FH6)"]
["AT1G71030","black","Encodes a putative myb family transcription factor. In contrast to most other myb-like proteins its myb domain consists of a single repeat. A proline-rich region potentially involved in transactivation is found in the C-terminal part of the protein. Its transcript accumulates mainly in leaves.","MYB-LIKE 2 (MYBL2)","ARABIDOPSIS MYB-LIKE 2 (ATMYBL2);MYB-LIKE 2 (MYBL2)"]
["AT2G17800","black","A member of ROP GTPase family. Rac-like GTP-binding protein ARAC1/ATGP2. Encodes a geranylgeranylated GTP binding protein. Involved in the auxin-activated 26S proteasome-dependent Aux/IAA proteolysis pathway.","ARABIDOPSIS RAC-LIKE 1 (ARAC1)","ARABIDOPSIS RAC-LIKE 1 (ARAC1); (ATGP2); (ATROP3);RHO-RELATED GTPASES FROM PLANTS 3 (ROP3); (ATRAC1)"]
["AT1G20090","black","Member of the Rho GTPase family. Functions to organize the microtubular cytoskeleton in combination with RIC1 and RIC4. These interactions affect pavement cell morphogenesis and pollen tube growth. ROP2 expression is stimulated by brassinosteroid treatment. Inhibit light-induced stomatal opening. The mRNA is cell-to-cell mobile.","RHO-RELATED PROTEIN FROM PLANTS 2 (ROP2)","ARABIDOPSIS RAC-LIKE 4 (ARAC4); (ATRAC4); (ATROP2);RHO-RELATED PROTEIN FROM PLANTS 2 (ROP2)"]
["AT3G48040","black","Encodes a member of the Rop subfamily of Rho GTPases in Arabidopsis that contains a putative farnesylation motif. It is localized to the plasma membrane and involved in the negative regulation of ABA signalling.","RHO-RELATED PROTEIN FROM PLANTS 10 (ROP10)","ARABIDOPSIS RAC-LIKE 8 (ARAC8); (ATRAC8);RHO-RELATED PROTEIN FROM PLANTS 10 (ATROP10);RHO-RELATED PROTEIN FROM PLANTS 10 (ROP10)"]
["AT5G65530","black","Encodes a protein kinase involved in mediating resistance to fungi and also trichome branch number. Kinase activity is increased by ROP6 which also affects its sub-cellular localization (becomes localized to the cell periphery_","ARABIDOPSIS RECEPTOR-LIKE CYTOPLASMIC KINASE ATRLCK VI_A3 (ATRLCK VI_A3)","ARABIDOPSIS RECEPTOR-LIKE CYTOPLASMIC KINASE ATRLCK VI_A3 (ATRLCK VI_A3)"]
["AT3G58460","black","RHOMBOID-like protein 15;(source:Araport11)","RHOMBOID-LIKE PROTEIN 15 (RBL15)","ARABIDOPSIS RHOMBOID-LIKE PROTEIN 11 (ATRBL11);RHOMBOID-LIKE PROTEIN 11 (RBL11);RHOMBOID-LIKE PROTEIN 15 (ATRBL15);RHOMBOID-LIKE PROTEIN 15 (RBL15)"]
["AT1G18600","black","Mitochondrion-located rhomboid-like protein","RHOMBOID-LIKE PROTEIN 12 (RBL12)","ARABIDOPSIS RHOMBOID-LIKE PROTEIN 12 (ATRBL12);RHOMBOID-LIKE PROTEIN 12 (RBL12);PRESENILINS-ASSOCIATED RHOMBOID-LIKE PROTEIN (PARL); (ATPARL)"]
["AT2G33550","black","Transcription factor which together with AITF1 regulates plant defense and autoimmunity.","ARABIDOPSIS SH4-RELATED3 (ASR3)","ARABIDOPSIS SH4-RELATED3 (ASR3)"]
["AT3G18930","black","RING/U-box superfamily protein;(source:Araport11)","ARABIDOPSIS T??XICOS EN LEVADURA 65 (ATL65)","ARABIDOPSIS T??XICOS EN LEVADURA 65 (ATL65)"]
["AT1G11790","black","Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identi&#64257;ed in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].","AROGENATE DEHYDRATASE 1 (ADT1)","ARABIDOPSIS THALIANA AROGENATE DEHYDRATASE 1 (AtADT1);AROGENATE DEHYDRATASE 1 (ADT1)"]
["AT5G24800","black","Encodes bZIP protein BZO2H2.","BASIC LEUCINE ZIPPER 9 (BZIP9)","ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 9 (AtbZIP9);BASIC LEUCINE ZIPPER 9 (BZIP9);BASIC LEUCINE ZIPPER O2 HOMOLOG 2 (BZO2H2)"]
["AT4G15210","black","cytosolic beta-amylase expressed in rosette leaves and inducible by sugar. RAM1 mutants have reduced beta amylase in leaves and stems.","BETA-AMYLASE 5 (BAM5)","ARABIDOPSIS THALIANA BETA-AMYLASE (ATBETA-AMY); (AT-BETA-AMY);REDUCED BETA AMYLASE 1 (RAM1); (BMY1);BETA-AMYLASE 5 (BAM5)"]
["AT5G23580","black","Member of a unique family of enzymes containing a single polypeptide chain with a kinase domain at the amino terminus and a putative calcium-binding EF hands structure at the carboxyl terminus; recombinant protein is fully active and induced by Ca2+","CALMODULIN-LIKE DOMAIN PROTEIN KINASE 9 (CDPK9)","ARABIDOPSIS THALIANA CALMODULIN-LIKE DOMAIN PROTEIN KINASE 9 (ATCDPK9);CALMODULIN-LIKE DOMAIN PROTEIN KINASE 9 (CDPK9); (ATCPK12);CALCIUM-DEPENDENT PROTEIN KINASE 12 (CPK12)"]
["AT5G04770","black","Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs. Expressed in sink tissues. Induced during infestation of roots by the plant parasitic root-knot nematode, Meloidogyne incognita. Localized in the plasma membrane.","CATIONIC AMINO ACID TRANSPORTER 6 (CAT6)","ARABIDOPSIS THALIANA CATIONIC AMINO ACID TRANSPORTER 6 (ATCAT6);CATIONIC AMINO ACID TRANSPORTER 6 (CAT6)"]
["AT3G29030","black","Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)","EXPANSIN A5 (EXPA5)","ARABIDOPSIS THALIANA EXPANSIN A5 (ATEXPA5);ARABIDOPSIS THALIANA EXPANSIN 5 (ATEXP5); (ATHEXP ALPHA 1.4);EXPANSIN 5 (EXP5);EXPANSIN A5 (EXPA5)"]
["AT5G57685","black","Encodes a member of the GDU (glutamine dumper) family proteins involved in amino acid export: At4g31730 (GDU1), At4g25760 (GDU2), At5g57685 (GDU3), At2g24762 (GDU4), At5g24920 (GDU5), At3g30725 (GDU6) and At5g38770 (GDU7).","GLUTAMINE DUMPER 3 (GDU3)","ARABIDOPSIS THALIANA GLUTAMINE DUMPER 3 (AtGDU3);GLUTAMINE DUMPER 3 (GDU3);LESS SUSCEPTIBLE TO BSCTV 1 (LSB1)"]
["AT4G25720","black","This locus encodes a protein with similarity to gamma-glutamylcyclotransferase that may be involved in catalyzing the formation of pyroglutate residue on proteins that have been post-translationally processed to reveal a glutamine at their N-terminus. Enzymatic assays to test the function of this protein were performed using a truncated form of the protein lacking a signal peptide that is most similar to the AT4G25720.1 protein model.","GLUTAMINYL CYCLASE (QC)","ARABIDOPSIS THALIANA GLUTAMINYL CYCLASE (ATQC);GLUTAMINYL CYCLASE (QC);GLUTAMINYL CYCLOTRANSFERASE (QCT)"]
["AT2G45160","black","Belongs to one of the LOM (LOST MERISTEMS) genes: AT2G45160 (LOM1), AT3G60630 (LOM2) and AT4G00150 (LOM3). LOM1 and LOM2 promote cell differentiation at the periphery of shoot meristems and help to maintain their polar organization.","HAIRY MERISTEM 1 (HAM1)","ARABIDOPSIS THALIANA HAIRY MERISTEM 1 (ATHAM1);LOST MERISTEMS 1 (LOM1);SCARECROW-LIKE 27 (SCL27);HAIRY MERISTEM 1 (HAM1)"]
["AT1G30220","black","Inositol transporter presenting conserved extracellular loop domains homologs of plexins/semaphorin/integrin (PSI) domains from animal type I receptors.","INOSITOL TRANSPORTER 2 (INT2)","ARABIDOPSIS THALIANA INOSITOL TRANSPORTER 2 (ATINT2);INOSITOL TRANSPORTER 2 (INT2)"]
["AT1G53510","black","Member of MAP Kinase familly. Target of MPKKK20 phosphorylation. Mutant root growth is sensitive oryzalin and suggestive of a role in signaling during microtubule organization.","MITOGEN-ACTIVATED PROTEIN KINASE 18 (MPK18)","ARABIDOPSIS THALIANA MAP KINASE 18 (ATMPK18);MITOGEN-ACTIVATED PROTEIN KINASE 18 (MPK18)"]
["AT3G29770","black","Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.","METHYL ESTERASE 11 (MES11)","ARABIDOPSIS THALIANA METHYL ESTERASE 11 (ATMES11);METHYL ESTERASE 11 (MES11)"]
["AT4G16690","black","Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on MeSA, MeGA4, or MEGA9 in vitro. Although MES16 is similar to MES17, a MeIAA hydrolase, two mes16 mutant lines (SALK_151578) and (SALK_139756) do not show altered sensitivity to MeIAA in root growth assays. MES16 transcripts appear to be more than 10-fold less abundant than those of MES17 in roots.","METHYL ESTERASE 16 (MES16)","ARABIDOPSIS THALIANA METHYL ESTERASE 16 (ATMES16);METHYL ESTERASE 16 (MES16)"]
["AT3G47690","black","Encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis.","MICROTUBULE END BINDING PROTEIN EB1A (EB1A)","ARABIDOPSIS THALIANA MICROTUBULE END BINDING PROTEIN EB1A (ATEB1A);MICROTUBULE END BINDING PROTEIN EB1A (EB1A);ATEB1-HOMOLOG2 (ATEB1H2)"]
["AT1G04160","black","Encodes a member of the type XI myosin protein family involved in root hair elongation.","MYOSIN XI B (XIB)","ARABIDOPSIS THALIANA MYOSIN XI B (ATXIB); (MYO11B1);MYOSIN XI B (XIB);MYOSIN XI-8 (XI-8);MYOSIN XI B (XI-B)"]
["AT2G47490","black","Encodes a chloroplast-localized NAD+ transporter that transports NAD+ in a counter exchange mode with ADP and AMP in vitro.","NAD+ TRANSPORTER 1 (NDT1)","ARABIDOPSIS THALIANA NAD+ TRANSPORTER 1 (ATNDT1);NAD+ TRANSPORTER 1 (NDT1)"]
["AT1G68760","black","Encodes a cytosol-localized nudix hydrolase that hydrolyzes 8-oxo-(d)GTP to its monophosphate form. This protective mechanism prevents the misincorporation of these oxidized nucleotides into DNA and RNA. NUDX1 also has a low level of dihydroneopterin triphosphate pyrophosphatase activity in vitro and may participate in the folate synthesis pathway.","NUDIX HYDROLASE 1 (NUDX1)","ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 1 (atnudt1);NUDIX HYDROLASE 1 (ATNUDX1);NUDIX HYDROLASE 1 (NUDX1);NUDIX HYDROLASE 1 (NUDX1)"]
["AT4G10770","black","oligopeptide transporter","OLIGOPEPTIDE TRANSPORTER 7 (OPT7)","ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 7 (ATOPT7);OLIGOPEPTIDE TRANSPORTER 7 (OPT7)"]
["AT5G61670","black","Encodes a close homolog of the Cauliflower OR (Orange) protein that is located in the chloroplast of light grown organs but in the nucleus of etiolated cotyledons. The function of OR is to induce the differentiation of proplastids or other noncolored plastids into chromoplasts for carotenoid accumulation. Both proteins contain a Cysteine-rich zinc finger domain that is highly specific to DnaJ-like molecular chaperons. The AtOR protein interacts directly with the PSY (phytoene synthase) protein and acts as a positive posttranscriptional regulator of its expression, thereby affecting carotenoid biosynthesis.","ARABIDOPSIS THALIANA ORANGE (ATOR)","ARABIDOPSIS THALIANA ORANGE (ATOR);ORANGE (OR)"]
["AT4G39990","black","Rab GTPase that selectively marks cell wall-containing TGN compartments. Involved in protein trafficking to membranes during tip growth.","RAB GTPASE HOMOLOG A4B (RABA4B)","ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG A 4B (ATRABA4B); (ATRAB11G);GTP-BINDING PROTEIN 3 (ATGB3);RAB GTPASE HOMOLOG A4B (RABA4B)"]
["AT2G29390","black","Encodes a sterol 4-alpha-methyl-oxidase, specifically a 4-alpha-methyl-delta-7-sterol-4alpha-methyl-oxidase.","STEROL 4-ALPHA-METHYL-OXIDASE 2-2 (SMO2-2)","ARABIDOPSIS THALIANA STEROL 4-ALPHA-METHYL-OXIDASE 2-2 (ATSMO2-2);STEROL 4-ALPHA-METHYL-OXIDASE 2-2 (SMO2-2);STEROL 4-ALPHA-METHYL-OXIDASE 2 (ATSMO2)"]
["AT5G07010","black","Encodes a sulfotransferase that acts specifically on 11- and 12-hydroxyjasmonic acid. Transcript levels for this enzyme are increased by treatments with jasmonic acid (JA), 12-hydroxyJA, JA-isoleucine, and 12-oxyphytodienoic acid (a JA precursor).","SULFOTRANSFERASE 2A (ST2A)","ARABIDOPSIS THALIANA SULFOTRANSFERASE 2A (ATST2A);SULFOTRANSFERASE 2A (ST2A)"]
["AT4G18270","black","Encodes protein similar to similar to bacterial translocase I (mra Y). Expressed during flower bud development.","TRANSLOCASE 11 (TRANS11)","ARABIDOPSIS THALIANA TRANSLOCASE 11 (ATTRANS11);TRANSLOCASE 11 (TRANS11)"]
["AT5G45260","black","Confers resistance to Ralstonia solanacearum. Similar to NBLS-TIR resistance genes,and also contains similarity to transcription factors. Interacts with pathogen effector protein AvrPop2.","RESISTANT TO RALSTONIA SOLANACEARUM 1 (RRS1)","ARABIDOPSIS THALIANA WRKY DOMAIN PROTEIN 52 (ATWRKY52);SENSITIVE TO LOW HUMIDITY 1 (SLH1);RESISTANT TO RALSTONIA SOLANACEARUM 1 (RRS1-R);RESISTANT TO RALSTONIA SOLANACEARUM 1 (RRS1)"]
["AT4G30400","black","RING/U-box superfamily protein;(source:Araport11)","ARABIDOPSIS TOXICOS EN LEVADURA 13 (ATL13)","ARABIDOPSIS TOXICOS EN LEVADURA 13 (ATL13)"]
["AT5G42200","black","RING/U-box superfamily protein;(source:Araport11)","ARABIDOPSIS TOXICOS EN LEVADURA 23 (ATL23)","ARABIDOPSIS TOXICOS EN LEVADURA 23 (ATL23)"]
["AT2G35100","black","Putative glycosyltransferase, similar to other CAZy Family 47 proteins. The protein is predicted to be a type 2 membrane protein with a signal anchor and is predicted to be targeted to the secretory pathway and to have a single transmembrane helix near the N terminus; hence, the protein has the features expected for a type II membrane protein targeted to the Golgi vesicles. The gene was shown to be expressed in all tissues but particularly in vascular tissues of leaves and stems.","ARABINAN DEFICIENT 1 (ARAD1)","ARABINAN DEFICIENT 1 (ARAD1)"]
["AT5G44930","black","Encodes a putative arabinosyltransferase that is associated with arabinan biosynthesis and is not redundant with ARAD1. The two glycosyltransferases may function in complexes held together by disulfide bridges.","ARABINAN DEFICIENT 2 (ARAD2)","ARABINAN DEFICIENT 2 (ARAD2)"]
["AT3G13520","black","Encodes a GPI-anchored arabinogalactan (AG) peptide with a short 'classical' backbone of 10 amino acids, seven of which are conserved among the 4 other Arabidopsis AG peptides. These peptides may be involved in cell signaling.","ARABINOGALACTAN PROTEIN 12 (AGP12)","ARABINOGALACTAN PROTEIN 12 (AGP12); (ATAGP12)"]
["AT2G23130","black","AGP17 is a lysine-rich arabinogalactan-protein (AGP) and part of a multi-gene family of glycoproteins with approx. 50 members. It falls into one subclass with AGP18 and AGP19, other lysine-rich AGPs. 84% of its proline residues are hydroxylated to hydroproline and its heavy glycosylation accounts for appr. 69% of the molecular weight. The main glycosyl residues are arabinose (30.1%) and galactose (55.1%). Glycosyl linkages are consistent with type II arabinogalactans. AGP17 is predicted to have a glycosylphosphatidylinositol (GPI)anchor and is localized to the plasma membrane and Hechtian strands. It is expressed in young/old leaves, shoots, suspension cultures and flowers.","ARABINOGALACTAN PROTEIN 17 (AGP17)","ARABINOGALACTAN PROTEIN 17 (AGP17); (ATAGP17)"]
["AT3G53710","black","A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.","ARF-GAP DOMAIN 6 (AGD6)","ARF-GAP DOMAIN 6 (AGD6)"]
["AT2G32940","black","Encodes a nuclear localized 879-amino-acid protein that contains conserved PAZ and PIWI domains that is important for the accumulation of specific heterochromatin-related siRNAs, and for DNA methylation and transcriptional gene silencing.","ARGONAUTE 6 (AGO6)","ARGONAUTE 6 (AGO6)"]
["AT3G44720","black","Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identi&#64257;ed in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250]. The mRNA is cell-to-cell mobile.","AROGENATE DEHYDRATASE 4 (ADT4)","AROGENATE DEHYDRATASE 4 (ADT4)"]
["AT5G22630","black","Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identi&#64257;ed in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250]. The mRNA is cell-to-cell mobile.","AROGENATE DEHYDRATASE 5 (ADT5)","AROGENATE DEHYDRATASE 5 (ADT5)"]
["AT5G42050","black","Stress responsive asparagine-rich protein. Binds to PevD (Verticillium dahliae ) fungal effector protein. NRP interacts with CRY2, leading to increased cytoplasmic accumulation of CRY2 in a blue light-independent manner (PMID:28633330).NRP also binds FyPP3 and recruits it to endosomes and thus targets it for degradation.Under ER stress NRP1 is activated by bZIP60 and inhibits cell death.","ASPARAGINE-RICH PROTEIN (NRP)","ASPARAGINE-RICH PROTEIN (NRP);ASPARAGINE-RICH PROTEIN 1 (NRP1)"]
["AT2G22250","black","Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity.","ASPARTATE AMINOTRANSFERASE (AAT)","ASPARTATE AMINOTRANSFERASE (ATAAT);ASPARTATE AMINOTRANSFERASE (AAT);MATERNAL EFFECT EMBRYO ARREST 17 (MEE17);PREPHENATE AMINOTRANSFERASE (PAT)"]
["AT5G66870","black","Encodes LOB domain protein whose overexpression results in KNOX gene repression. Overexpression also results in plants with hyponastic leaves, downward pointing flowers and reduced apical dominance. May be involved in the transcriptional regulation of the homeobox gene BP (brevipedicellus) during lateral organ differentiation. Acts together with AS2 in proximal-distal symmetry determination.","ASYMMETRIC LEAVES 2-LIKE 1 (ASL1)","ASYMMETRIC LEAVES 2-LIKE 1 (ASL1);LATERAL ORGAN BOUNDARIES DOMAIN GENE 36 (LBD36)"]
["AT2G33620","black","AT hook motif DNA-binding family protein;(source:Araport11)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 10 (AHL10)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 10 (AHL10)"]
["AT3G61310","black","AT hook motif DNA-binding family protein;(source:Araport11)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 11 (AHL11)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 11 (AHL11)"]
["AT1G63480","black","AT hook motif DNA-binding family protein;(source:Araport11)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 12 (AHL12)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 12 (AHL12)"]
["AT2G45850","black","Positive regulator of leaf senescence.","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 9 (AHL9)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 9 (AHL9)"]
["AT5G49460","black","One of the two genes encoding subunit B of the cytosolic enzyme ATP Citrate Lyase (ACL)","ATP CITRATE LYASE SUBUNIT B 2 (ACLB-2)","ATP CITRATE LYASE SUBUNIT B 2 (ACLB-2)"]
["AT4G25960","black","P-glycoprotein 2;(source:Araport11)","ATP-BINDING CASSETTE B2 (ABCB2)","ATP-BINDING CASSETTE B2 (ABCB2);P-GLYCOPROTEIN 2 (PGP2)"]
["AT5G06530","black","Encodes ABCG22, an ABC transporter gene. Mutation results in increased water transpiration and drought susceptibility.","ATP-BINDING CASSETTE G22 (ABCG22)","ATP-BINDING CASSETTE G22 (ABCG22);ARABIDOPSIS THALIANA ATP-BINDING CASSETTE G22 (AtABCG22)"]
["AT1G53390","black","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","ATP-BINDING CASSETTE G24 (ABCG24)","ATP-BINDING CASSETTE G24 (ABCG24)"]
["AT2G13610","black","ABC-2 type transporter family protein;(source:Araport11)","ATP-BINDING CASSETTE G5 (ABCG5)","ATP-BINDING CASSETTE G5 (ABCG5)"]
["AT5G52860","black","ABC-2 type transporter family protein;(source:Araport11)","ATP-BINDING CASSETTE G8 (ABCG8)","ATP-BINDING CASSETTE G8 (ABCG8)"]
["AT2G37300","black","transmembrane protein;(source:Araport11)","ATP-BINDING CASSETTE I16 (ABCI16)","ATP-BINDING CASSETTE I16 (ABCI16)"]
["AT1G60810","black","One of the three genes encoding subunit A of the trimeric enzyme ATP Citrate lyase","ATP-CITRATE LYASE A-2 (ACLA-2)","ATP-CITRATE LYASE A-2 (ACLA-2); (ACLA2)"]
["AT2G24540","black","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)","ATTENUATED FAR-RED RESPONSE (AFR)","ATTENUATED FAR-RED RESPONSE (AFR)"]
["AT2G44140","black","Autophagy protein that cleaves ATG8s.","AUTOPHAGY 4A (ATG4A)","AUTOPHAGY 4A (ATG4A)"]
["AT3G49590","black","Autophagy protein.Forms part of a protein kinase complex that initiates autophagosome formation.","AUTOPHAGY-RELATED 13A (ATG13a)","AUTOPHAGY-RELATED 13A (ATG13a)"]
["AT4G36520","black","Chaperone DnaJ-domain superfamily protein;(source:Araport11)","AUXILIN-LIKE4 (AUXILIN-LIKE4)","AUXILIN-LIKE4 (AUXILIN-LIKE4)"]
["AT5G60450","black","Encodes a member of the ARF family of transcription factors which mediate auxin responses. ARF4 appears to have redundant function with ETT(ARF3) in specifying abaxial cell identity.","AUXIN RESPONSE FACTOR 4 (ARF4)","AUXIN RESPONSE FACTOR 4 (ARF4)"]
["AT1G30330","black","Encodes a member of the auxin response factor family. Mediates auxin response via expression of auxin regulated genes. Acts redundantly with ARF8 to control stamen elongation and flower maturation. Expression of ARF6 is controlled by miR167.","AUXIN RESPONSE FACTOR 6 (ARF6)","AUXIN RESPONSE FACTOR 6 (ARF6)"]
["AT4G23980","black","Encodes auxin response factor 9 (ARF9). The mRNA is cell-to-cell mobile.","AUXIN RESPONSE FACTOR 9 (ARF9)","AUXIN RESPONSE FACTOR 9 (ARF9)"]
["AT1G19220","black","Encodes an auxin response factor that contains the conserved VP1-B3 DNA-binding domain at its N-terminus and the Aux/IAA-like domains III and IV present in most ARFs at its C-terminus. The protein interacts with IAA1 (yeast two hybrid) and other auxin response elements such as ER7 and ER9 (yeast one hybrid). ARF19 protein can complement many aspects of the arf7 mutant phenotype and , together with ARF7, is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.","AUXIN RESPONSE FACTOR 19 (ARF19)","AUXIN RESPONSE FACTOR11 (ARF11);INDOLE-3-ACETIC ACID INDUCIBLE 22 (IAA22);AUXIN RESPONSE FACTOR 19 (ARF19)"]
["AT3G07390","black","isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular. The mRNA is cell-to-cell mobile.","AUXIN-INDUCED IN ROOT CULTURES 12 (AIR12)","AUXIN-INDUCED IN ROOT CULTURES 12 (AIR12)"]
["AT2G32410","black","Involved in chiasma distribution, affects expression of key DNA repair and meiotic genes, signifcant role in DNA repair.","AXR1-LIKE (AXL)","AXR1-LIKE (AXL);AXR1- LIKE 1 (AXL1)"]
["AT3G23750","black","Transmembrane kinase involved in auxin signaling. Phosphorylates T101 of TAA1 to inactive the transaminase and block auxin biosynthesis.","BAK1-ASSOCIATING RECEPTOR-LIKE KINASE 1 (BARK1)","BAK1-ASSOCIATING RECEPTOR-LIKE KINASE 1 (BARK1);TRANS-MEMBRANE KINASE 4 (TMK4)"]
["AT3G45260","black","BIB is a member of the BIRD family of zinc finger proteins that includes JKD. BIB functions redundantly with JKD to retain SHR in the nucleus and thereby restrict SHR movement in root tissues.","BALDIBIS (BIB)","BALDIBIS (BIB); (IDD9)"]
["AT4G20270","black","Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. The mRNA is cell-to-cell mobile.","BARELY ANY MERISTEM 3 (BAM3)","BARELY ANY MERISTEM 3 (BAM3)"]
["AT4G29100","black","Member of basic helix loop helix protein family. Expressed primarily in vascular system. Overexpression causes ABA sensitivity. Together with PFA1 and PFA2 governs the competence of pericycle cells to initiate lateral root primordium formation. Governs the competence of pericycle cells to initiate lateral root primordium formation.","BASIC HELIX LOOP HELIX 68 (BHLH68)","BASIC HELIX LOOP HELIX 68 (BHLH68);PERICYCLE FACTOR TYPE-A 3 (PFA3)"]
["AT2G18160","black","Encodes a b-ZIP transcription factor.","BASIC LEUCINE-ZIPPER 2 (bZIP2)","BASIC LEUCINE-ZIPPER 2 (ATBZIP2);G-BOX BINDING FACTOR 5 (GBF5);BASIC LEUCINE-ZIPPER 2 (bZIP2);FLORAL TRANSITION AT THE MERISTEM3 (FTM3)"]
["AT4G38900","black","Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11)","BASIC LEUCINE-ZIPPER 29 (BZIP29)","BASIC LEUCINE-ZIPPER 29 (BZIP29);DRINK ME-LIKE (DKML)"]
["AT1G75390","black","basic leucine-zipper 44;(source:Araport11)","BASIC LEUCINE-ZIPPER 44 (bZIP44)","BASIC LEUCINE-ZIPPER 44 (AtbZIP44);BASIC LEUCINE-ZIPPER 44 (bZIP44)"]
["AT1G14685","black","Encodes a member of the BASIC PENTACYSTEINE (BPC) proteins. BPC proteins are plant-specific transcription factors present throughout land plants. BPC transcription factor family is integral for a wide range of processes that support normal growth and development.Along with BPC1, BPC2 binds to the promoter of and represses GALS1 thereby reducing beta 1,4- galactan accumulation.","BASIC PENTACYSTEINE 2 (BPC2)","BASIC PENTACYSTEINE 2 (ATBPC2); (BBR/BPC2);BASIC PENTACYSTEINE 2 (BPC2)"]
["AT4G38910","black","Encodes a basic pentacysteine protein that is localized to the nucleus and specifically binds in vitro to GA dinucleotide repeats.","BASIC PENTACYSTEINE 5 (BPC5)","BASIC PENTACYSTEINE 5 (BPC5)"]
["AT3G08670","black","serine/arginine repetitive matrix-like protein;(source:Araport11)","BASIC PROLINE-RICH PROTEIN6 (BPP6)","BASIC PROLINE-RICH PROTEIN6 (BPP6)"]
["AT2G21320","black","B-box domain containing transcriptional regulator involved in circadian periodicity.","B-BOX DOMAIN PROTEIN 18 (BBX18)","B-BOX DOMAIN PROTEIN 18 (BBX18)"]
["AT4G38960","black","BBX19 is a B-box containing transcriptional regulator involved in photomorphogenesis and flowering.","B-BOX DOMAIN PROTEIN 19 (BBX19)","B-BOX DOMAIN PROTEIN 19 (BBX19)"]
["AT4G27310","black","Encodes an atypical B-box domain protein that negatively regulates photomorphogenic development by interfering with the binding of the transcription factor HY5 to target gene promoters. Degradation of BBX28 in darkness is dependent on COP1 and occurs via the 26S proteasome pathway. BBX28 acts as a key factor in the COP1-HY5 regulatory hub by maintaining proper HY5 activity to ensure normal photomorphogenic development in plants. Interacts with CO via B-box domain resulting in decreased FT expression and delayed flowering.","B-BOX DOMAIN PROTEIN 28 (BBX28)","B-BOX DOMAIN PROTEIN 28 (BBX28)"]
["AT5G54470","black","B-Box transcription factor (TF) family protein which integrates photomorphogenic signaling with defense responses by promoting flavonoid, sinapate and glucosinolate accumulation in leavees. Orchestrates the accumulation of specific light-induced metabolites and regulates resistance against pathogens and herbivores.","B-BOX DOMAIN PROTEIN 29 (BBX29)","B-BOX DOMAIN PROTEIN 29 (BBX29)"]
["AT5G56340","black","RING/U-box superfamily protein;(source:Araport11)","(ATCRT1)","BCA2A ZINC FINGER ATL 4 (BTL04); (ATCRT1)"]
["AT1G52670","black","Single hybrid motif superfamily protein;(source:Araport11)","BCCP-LIKE PROTEIN 1 (BLP1)","BCCP-LIKE PROTEIN 1 (BLP1);BIOTIN/LIPOYL ATTACHMENT DOMAIN CONTAINING 2 (BADC2)"]
["AT3G15690","black","Single hybrid motif superfamily protein;(source:Araport11)","BCCP-LIKE PROTEIN 2 (BLP2)","BCCP-LIKE PROTEIN 2 (BLP2);BIOTIN/LIPOYL ATTACHMENT DOMAIN CONTAINING 3 (BADC3)"]
["AT3G56130","black","biotin/lipoyl attachment domain-containing protein;(source:Araport11)","BCCP-LIKE PROTEIN 3 (BLP3)","BCCP-LIKE PROTEIN 3 (BLP3);BIOTIN/LIPOYL ATTACHMENT DOMAIN CONTAINING 1 (BADC1)"]
["AT5G52060","black","A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.","BCL-2-ASSOCIATED ATHANOGENE 1 (BAG1)","BCL-2-ASSOCIATED ATHANOGENE 1 (ATBAG1);BCL-2-ASSOCIATED ATHANOGENE 1 (BAG1)"]
["AT5G62100","black","A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.","BCL-2-ASSOCIATED ATHANOGENE 2 (BAG2)","BCL-2-ASSOCIATED ATHANOGENE 2 (BAG2);BCL-2-ASSOCIATED ATHANOGENE 2 (ATBAG2)"]
["AT1G75410","black","BEL1-like homeodomain 3 (BLH3)","BEL1-LIKE HOMEODOMAIN 3 (BLH3)","BEL1-LIKE HOMEODOMAIN 3 (BLH3)"]
["AT4G34610","black","Acts as a negative regulator of xylem vessel cells as a protein complex together with OVATE FAMILY PROTEIN1 (OFP1), OFP4, and MYB75.","BEL1-LIKE HOMEODOMAIN 6 (BLH6)","BEL1-LIKE HOMEODOMAIN 6 (BLH6)"]
["AT4G18890","black","BES1/BZR1 homolog 3;(source:Araport11)","BES1/BZR1 HOMOLOG 3 (BEH3)","BES1/BZR1 HOMOLOG 3 (BEH3)"]
["AT2G32810","black","putative beta-galactosidase","BETA GALACTOSIDASE 9 (BGAL9)","BETA GALACTOSIDASE 9 (BGAL9);BETA-GALACTOSIDASE 9 (BGAL9)"]
["AT3G60130","black","beta glucosidase 16;(source:Araport11)","BETA GLUCOSIDASE 16 (BGLU16)","BETA GLUCOSIDASE 16 (BGLU16)"]
["AT1G26560","black","beta glucosidase 40;(source:Araport11)","BETA GLUCOSIDASE 40 (BGLU40)","BETA GLUCOSIDASE 40 (BGLU40)"]
["AT1G61820","black","beta glucosidase 46;(source:Araport11)","BETA GLUCOSIDASE 46 (BGLU46)","BETA GLUCOSIDASE 46 (BGLU46)"]
["AT5G55500","black","Encodes a beta-1,2-xylosyltransferase that is glycosylated at two positions. The mRNA is cell-to-cell mobile.","BETA-1,2-XYLOSYLTRANSFERASE (XYLT)","BETA-1,2-XYLOSYLTRANSFERASE (XYLT);ARABIDOPSIS THALIANA BETA-1,2-XYLOSYLTRANSFERASE (ATXYLT)"]
["AT5G42100","black","encodes a plasmodesmal (Pd)-associated membrane protein involved in plasmodesmal callose degradation, i.e. beta-1,3-glucanase (EC 3.2.1.39), and functions in the gating of Pd","BETA-1,3-GLUCANASE_PUTATIVE (BG_PPAP)","BETA-1,3-GLUCANASE_PUTATIVE (BG_PPAP); (ATBG_PAP);ARABIDOPSIS THALIANA BETA-1,3-GLUCANASE_PUTATIVE (ATBG_PPAP)"]
["AT3G13750","black","beta-galactosidase, glycosyl hydrolase family 35 The mRNA is cell-to-cell mobile.","BETA GALACTOSIDASE 1 (BGAL1)","BETA-GALACTOSIDASE 1 (BGAL1);BETA GALACTOSIDASE 1 (BGAL1)"]
["AT5G39990","black","Encodes GlcAT14A, a beta-glucuronosyltransferase involved in the biosynthesis of type II arabinogalactan. The protein was localized to the Golgi apparatus when transiently expressed in Nicotiana benthamiana. Plays a role in cell elongation during seedling growth.","BETA-GLUCURONOSYLTRANSFERASE 14A (GLCAT14A)","BETA-GLUCURONOSYLTRANSFERASE 14A (GLCAT14A)"]
["AT1G05590","black","Encodes a protein with &#946;-hexosaminidase activity (the enzyme is active with p-nitrophenyl-&#946;-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-&#946;-N-acetylgalactosaminide). Chitotriose-PA was digested almost completely overnight by a 50% ammonium sulfate fraction of a supernatant yeast expressing AtHEX3.","BETA-HEXOSAMINIDASE 2 (HEXO2)","BETA-HEXOSAMINIDASE 2 (HEXO2);BETA-HEXOSAMINIDASE 3 (ATHEX3)"]
["AT1G65590","black","Encodes a protein with beta-hexosaminidase activity. Located on the plasma membrane.","BETA-HEXOSAMINIDASE 3 (HEXO3)","BETA-HEXOSAMINIDASE 3 (HEXO3); (ATHEX1)"]
["AT1G74960","black","Encodes a plastidic beta-ketoacyl-ACP synthase II, involved in fatty acid elongation from 16:0-ACP to 18:0-ACP. Homozygous knock-out mutants are embryo lethal, indicating early embryo development is sensitive to elevated 16:0.","FATTY ACID BIOSYNTHESIS 1 (FAB1)","BETA-KETOACYL-ACP SYNTHETASE 2 (KAS2);FATTY ACID BIOSYNTHESIS 1 (FAB1);ARABIDOPSIS BETA-KETOACYL-ACP SYNTHETASE 2 (ATKAS2)"]
["AT5G49360","black","Encodes a bifunctional {beta}-D-xylosidase/{alpha}-L-arabinofuranosidase required for pectic arabinan modification. Located in the extracellular matrix. Gene is expressed specifically in tissues undergoing secondary wall thickening. This is a member of glycosyl hydrolase family 3 and has six other closely related members.","BETA-XYLOSIDASE 1 (BXL1)","BETA-XYLOSIDASE 1 (ATBXL1);BETA-XYLOSIDASE 1 (BXL1)"]
["AT4G22840","black","Sodium Bile acid symporter family;(source:Araport11)","BILE ACID SODIUM SYMPORTER 6 (BASS6)","BILE ACID SODIUM SYMPORTER 6 (BASS6)"]
["AT1G78560","black","Chloroplast inner membrane, pantothenate transporter.","BILE ACID:SOD-IUM SYM-PORT-ER 1 (BASS1)","BILE ACID:SOD-IUM SYM-PORT-ER 1 (BASS1)"]
["AT2G43360","black","Catalyzes the conversion of dethiobiotin to biotin.","BIOTIN AUXOTROPH 2 (BIO2)","BIOTIN AUXOTROPH 2 (BIO2);BIOTIN AUXOTROPH B (BIOB); (EMB49)"]
["AT5G15530","black","biotin carboxyl carrier protein isoform 2 (BCCP2) mRNA,","BIOTIN CARBOXYL CARRIER PROTEIN 2 (BCCP2)","BIOTIN CARBOXYL CARRIER PROTEIN 2 (BCCP2); (CAC1-B)"]
["AT5G04620","black","The cDNA encoding 7-keto-8-aminopelargonic acid (KAPA) synthase, the first committed enzyme of the biotin synthesis pathway has been cloned and its molecular function confirmed (functional complementation of an E. coli mutant). The subcellular localization of the enzyme (cytosol) proves that the biotin biosynthesis in plants takes place in different compartments which differs from the biosynthetic route found in microorganisms.","BIOTIN F (BIOF)","BIOTIN F (ATBIOF);BIOTIN 4 (BIO4);BIOTIN F (BIOF)"]
["AT5G49550","black","Putative homolog of mammalian BLOC-1 Subunit 2. Protein - protein interaction with BLOS1.","BLOC SUBUNIT 2 (BLOS2)","BLOC SUBUNIT 2 (BLOS2)"]
["AT4G18950","black","BHP1 is a Raf-like protein kinase involved in mediating blue light dependent stomatal opening.","BLUE LIGHT-DEPENDENT H+-ATPASE PHOSPHORYLATION (BHP)","BLUE LIGHT-DEPENDENT H+-ATPASE PHOSPHORYLATION (BHP); (ILK5)"]
["AT1G04550","black","IAA12/BDL plays a role in auxin-mediated processes of apical-basal patterning in the embryo. bdl mutants lack a primary root meristem","INDOLE-3-ACETIC ACID INDUCIBLE 12 (IAA12)","BODENLOS (BDL);INDOLE-3-ACETIC ACID INDUCIBLE 12 (IAA12)"]
["AT1G79110","black","Encodes one of the BRGs (BOI-related gene) involved in resistance to Botrytis cinerea.","BOI-RELATED GENE 2 (BRG2)","BOI-RELATED GENE 2 (BRG2)"]
["AT1G67950","black","ACD11 binding partner, negatively regulates ROS-mediated defense response.","BPA1-LIKE 2 (BPL2)","BPA1-LIKE 2 (BPL2)"]
["AT3G03460","black","One of two paralogous GLTSCR domain containing proteins and a core component of SWI/SNF complexes. A specific subunit of BRM-associated SWI/SNF (BAS) complexes (PMID:36471048).Interacts with BRM and may be responsible for ensuring proper complex assembly and association with chromatin. Function is dependent upon the GLTSCR domain.","BRAHMA-INTERACTING PROTEIN 1 (BRIP1)","BRAHMA-INTERACTING PROTEIN 1 (BRIP1)"]
["AT1G75080","black","Encodes a positive regulator of the brassinosteroid (BR) signalling pathway that mediates both downstream BR responses and negative feedback regulation of BR biosynthesis. There is evidence for phosphorylation-dependent nucleocytoplasmic shuttling of BZR1. GSK3-like kinases (including BIN2), 14-3-3 proteins, and the phosphatase BSU1 seem to participate in this process. Phosphorylation also appears to affect BZR1's transcriptional activities.","BRASSINAZOLE-RESISTANT 1 (BZR1)","BRASSINAZOLE-RESISTANT 1 (BZR1)"]
["AT3G61460","black","Encodes a novel ring finger protein and forms an N-terminal hydrophobic domain and a C-terminal RING-H2 signature. Expression is down regulated by brassinolide.","BRASSINOSTEROID-RESPONSIVE RING-H2 (BRH1)","BRASSINOSTEROID-RESPONSIVE RING-H2 (BRH1)"]
["AT5G46570","black","Encodes BR-signaling kinase 2 (BSK2), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized.","BRASSINOSTEROID-SIGNALING KINASE 2 (BSK2)","BRASSINOSTEROID-SIGNALING KINASE 2 (BSK2)"]
["AT3G21560","black","Encodes a protein with sinapic acid:UDP-glucose glucosyltransferase activity. Mutants defective in this gene are hyper-fluorescent (which accumulate in their trichomes a compound that is likely to be 3',5'-dimethoxynaringenin chalcone or sinapoyltriacetic acid lactone, potential products of the concerted action of 4-coumarate CoA ligase and chalcone synthase on sinapic acid). Also shown to be required for Arabidopsis nonhost resistance to the Asian soybean rust pathogen Phakopsora pachyrhizi.","UDP-GLUCOSYL TRANSFERASE 84A2 (UGT84A2)","BRIGHT TRICHOMES 1 (BRT1); (BRT1);UDP-GLUCOSYL TRANSFERASE 84A2 (UGT84A2)"]
["AT2G38740","black","HAD-type phosphosugar phosphatase.","BROAD-RANGE SUGAR PHOSPHATE PHOSPHATASE (SGPP)","BROAD-RANGE SUGAR PHOSPHATE PHOSPHATASE (SGPP)"]
["AT1G76380","black","DNA-binding bromodomain-containing protein, interacts with core SWI/SNF complex components. Identified as a specific subunit of BRM-associated SWI/SNF (BAS) complexes (PMID:36471048).","BROMODOMAIN-CONTAINING PROTEIN 2 (BRD2)","BROMODOMAIN-CONTAINING PROTEIN 2 (BRD2)"]
["AT4G01360","black","Encodes a protein related to BYPASS1 (BPS1). Regulates production of mobile compound: bps signal.","BYPASS 3 (BPS3)","BYPASS 3 (BPS3)"]
["AT4G27280","black","EF-hand Ca2 + -binding protein, which is a Ca2+-dependent transducer of auxin-regulated gene expression and interacts with ICR1.","CA2+-DEPENDENT MODULATOR OF ICR1 (CMI1)","CA2+-DEPENDENT MODULATOR OF ICR1 (CMI1)"]
["AT2G40410","black","Encodes a Ca(2+)-dependent nuclease that can degrade both DNA and RNA.","CA2+-DEPENDENT NUCLEASE (ATCAN2)","CA2+-DEPENDENT NUCLEASE (ATCAN2);CALCIUM DEPENDENT NUCLEASE 2 (CAN2)"]
["AT5G33320","black","Encodes a plastid inner envelope protein PPT (phosphoenolpyruvate/phosphate translocator) that catalyzes the transport of phosphoenolpyruvate and phosphate across the inner envelope membrane of plastids. The mRNA is cell-to-cell mobile.","CAB UNDEREXPRESSED 1 (CUE1)","CAB UNDEREXPRESSED 1 (CUE1);NITROUS OXIDE OVEREXPRESSOR 1 (NOX1);ARABIDOPSIS THALIANA PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR (ARAPPT);PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR (PPT)"]
["AT4G26570","black","member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins); interacts with CIPK3/9/23/26 resulting in phosphorylation of their downstream targets, influencing the maintenance of cellular magnesium homeostasis.","CALCINEURIN B-LIKE 3 (CBL3)","CALCINEURIN B-LIKE 3 (CBL3);CALCINEURIN B-LIKE 3 (ATCBL3)"]
["AT5G55990","black","Encodes a member of the Arabidopsis CBL (Calcineurin B-like Calcium Sensor) protein family; interacts with CIPK3/9/23/26 resulting in phosphorylation of their downstream targets, influencing the maintenance of cellular magnesium homeostasis.","CALCINEURIN B-LIKE PROTEIN 2 (CBL2)","CALCINEURIN B-LIKE PROTEIN 2 (CBL2);SOS3-LIKE CALCIUM BINDING PROTEIN 1 (SCABP1); (ATCBL2)"]
["AT1G16020","black","vacuolar fusion protein (DUF1712);(source:Araport11)","CALCIUM CAFFEINE ZINC SENSITIVITY 1A (CCZ1A)","CALCIUM CAFFEINE ZINC SENSITIVITY 1A (CCZ1A)"]
["AT5G54590","black","Splice variant At5g54590.2 encodes CRLK1 (440-amino acid in length) calcium/calmodulin-regulated receptor-like kinase crucial for cold tolerance. CRLK1 is Primarily localized in the plasma membrane.","CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 (CRLK1)","CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 (CRLK1)"]
["AT3G51850","black","member of Calcium Dependent Protein Kinase The mRNA is cell-to-cell mobile.","CALCIUM-DEPENDENT PROTEIN KINASE 13 (CPK13)","CALCIUM-DEPENDENT PROTEIN KINASE 13 (CPK13)"]
["AT4G35987","black","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)","CALMODULIN N-METHYLTRANSFERASE (CAM KMT)","CALMODULIN N-METHYLTRANSFERASE (CAM KMT)"]
["AT4G00330","black","high overall homology to CRCK1","CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 2 (CRCK2)","CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 2 (CRCK2)"]
["AT5G61790","black","Calnexin is a conserved endoplasmic reticulum (ER) chaperone protein.","CALNEXIN 1 (CNX1)","CALNEXIN 1 (CNX1); (CNX1); (ATCNX1)"]
["AT1G56340","black","Encodes one of three Arabidopsis calreticulins. In CRT-deficient mouse fibroblasts, this protein restores ER Ca2+ levels. Post-transcriptionally regulates together with CRT2 VAMP721/722 levels under ER stress. Loss-of-function results in activation of the ethylene signaling pathway, reduced susceptibility to Verticillium longisporum.","CALRETICULIN 1A (CRT1a)","CALRETICULIN 1 (CRT1);CALRETICULIN 1A (CRT1a); (AtCRT1a)"]
["AT1G57680","black","plasminogen activator inhibitor;(source:Araport11)","CANDIDATE G-PROTEIN COUPLED RECEPTOR 1 (CAND1)","CANDIDATE G-PROTEIN COUPLED RECEPTOR 1 (CAND1)"]
["AT5G14310","black","carboxyesterase 16;(source:Araport11)","CARBOXYESTERASE 16 (CXE16)","CARBOXYESTERASE 16 (CXE16);CARBOXYESTERASE 16 (AtCXE16)"]
["AT5G23530","black","carboxyesterase 18;(source:Araport11)","CARBOXYESTERASE 18 (CXE18)","CARBOXYESTERASE 18 (CXE18);CARBOXYESTERASE 18 (AtCXE18)"]
["AT1G42960","black","expressed protein localized to the inner membrane of the chloroplast.","CARBOXYLTRANSFERASE INTERACTOR1 (CTI1)","CARBOXYLTRANSFERASE INTERACTOR1 (CTI1)"]
["AT3G63520","black","Encodes a protein with 9-<i>cis</i>-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including &#946;-carotene, lutein, zeaxanthin, and all-<i>trans</i>-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-<i>cis</i>-double or allenic bonds. The mRNA is cell-to-cell mobile.","CAROTENOID CLEAVAGE DIOXYGENASE 1 (CCD1)","CAROTENOID CLEAVAGE DIOXYGENASE 1 (CCD1);CAROTENOID CLEAVAGE DIOXYGENASE 1 (ATCCD1); (ATNCED1); (NCED1)"]
["AT5G57015","black","Member of CKL gene family (member of CKL-B group).","CASEIN KINASE I-LIKE 12 (ckl12)","CASEIN KINASE I-LIKE 12 (ckl12)"]
["AT4G34600","black","CAF2 is a peptide hormone expressed in the root stele that specifically binds the endodermis-expressed leucine-rich repeat receptor kinase GASSHO1 (GSO1)/SCHENGEN3 and its homolog, GSO2. Together with CAF1 it is required for formation of the casparian band.","CASPARIAN STRIP INTEGRITY FACTOR 2 (CIF2)","CASPARIAN STRIP INTEGRITY FACTOR 2 (CIF2)"]
["AT4G16442","black","Uncharacterized protein family (UPF0497);(source:Araport11)","CASP-LIKE PROTEIN 2B1 (CASPL2B1)","CASP-LIKE PROTEIN 2B1 (CASPL2B1)"]
["AT2G35760","black","Uncharacterized protein family (UPF0497);(source:Araport11)","CASP-LIKE PROTEIN 2B2 (CASPL2B2)","CASP-LIKE PROTEIN 2B2 (CASPL2B2)"]
["AT5G62820","black","Uncharacterized protein family (UPF0497);(source:Araport11)","CASP-LIKE PROTEIN 4A2 (CASPL4A2)","CASP-LIKE PROTEIN 4A2 (CASPL4A2)"]
["AT1G30270","black","Arabidopsis thaliana CBL-interacting protein kinase 23. CIPK23 serves as a positive regulator of the potassium transporter AKT1 by directly phosphorylating AKT1. CIPK23 is activated by the binding of two calcineurin B-like proteins, CBL1 and CBL9. The mRNA is cell-to-cell mobile.","CBL-INTERACTING PROTEIN KINASE 23 (CIPK23)","CBL-INTERACTING PROTEIN KINASE 23 (CIPK23);SNF1-RELATED PROTEIN KINASE 3.23 (SnRK3.23); (ATCIPK23);LOW-K+-SENSITIVE 1 (LKS1);SOS2-LIKE PROTEIN KINASE 17 (PKS17)"]
["AT3G23000","black","Encodes a serine/threonine protein kinase with similarities to CBL-interacting protein kinases, SNF1 and SOS2. The mRNA is cell-to-cell mobile.","CBL-INTERACTING PROTEIN KINASE 7 (CIPK7)","CBL-INTERACTING PROTEIN KINASE 7 (CIPK7);SNF1-RELATED PROTEIN KINASE 3.10 (SnRK3.10); (PKS7); (ATSRPK1); (ATSR2)"]
["AT3G18480","black","This gene is predicted to encode a protein that functions as a Golgi apparatus structural component, known as a golgin in mammals and yeast. A fluorescently-tagged version of CASP co-localizes with Golgi markers, and this localization appears to require the C-terminal (565?689aa) portion of the protein. The protein is inserted into a membrane in a type II orientation.","CCAAT-DISPLACEMENT PROTEIN ALTERNATIVELY SPLICED PRODUCT (CASP)","CCAAT-DISPLACEMENT PROTEIN ALTERNATIVELY SPLICED PRODUCT (AtCASP);CCAAT-DISPLACEMENT PROTEIN ALTERNATIVELY SPLICED PRODUCT (CASP)"]
["AT3G47630","black","Mitochondrial CDP-DAG synthase with a single transmembrane domain.","CDP-DAG SYNTHASE 6 (CDS6)","CDP-DAG SYNTHASE 6 (CDS6)"]
["AT3G50530","black","CDPK-related kinase","CDPK-RELATED KINASE (CRK)","CDPK-RELATED KINASE (CRK)"]
["AT2G46700","black","CDPK-related kinase 3;(source:Araport11)","CDPK-RELATED KINASE 3 (CRK3)","CDPK-RELATED KINASE 3 (CRK3); (ATCRK3)"]
["AT1G47960","black","Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling. This protein may inhibit their activity.","CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1 (C/VIF1)","CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1 (C/VIF1); (ATCIF1); (CIF1);CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 1 (ATC/VIF1)"]
["AT5G64620","black","Plant cell wall (CWI) and vacuolar invertases (VI) play important roles in carbohydrate metabolism, stress responses and sugar signaling.","CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2 (C/VIF2)","CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2 (ATC/VIF2);CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2 (C/VIF2)"]
["AT5G64740","black","Encodes a cellulose synthase isomer. CESA6 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA6, along with CESA1 and CESA3 are present in the same plasma membrane complex for cellulose biosynthesis. CESA2 and CESA5 are related to CESA6, having partially redundant roles. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. The mRNA is cell-to-cell mobile.","CELLULOSE SYNTHASE 6 (CESA6)","CELLULOSE SYNTHASE 6 (CESA6);PROCUSTE 1 (PRC1); (E112);ISOXABEN RESISTANT 2 (IXR2)"]
["AT1G77460","black","Encodes a plasma membrane, microtubule associated protein with sequence similarity to CSI1 that is involved in cellulose biosynthesis and cell elongation. A mutation in CSI3 alone do not appear to affect growth but enhances the cell elongation phenotype of CSI1 mutants. CSI3 co localizes with CSI1 and CESA3 and CESA6.","CELLULOSE SYNTHASE INTERACTIVE 3 (CSI3)","CELLULOSE SYNTHASE INTERACTIVE 3 (CSI3)"]
["AT4G07960","black","encodes a XyG glucan synthase; gene similar to cellulose synthase","CELLULOSE-SYNTHASE-LIKE C12 (CSLC12)","CELLULOSE-SYNTHASE LIKE C12 (CSLC12);CELLULOSE-SYNTHASE-LIKE C12 (ATCSLC12);CELLULOSE-SYNTHASE-LIKE C12 (CSLC12)"]
["AT5G13710","black","SMT1 controls the level of cholesterol in plants","STEROL METHYLTRANSFERASE 1 (SMT1)","CEPHALOPOD (CPH);STEROL METHYLTRANSFERASE 1 (SMT1)"]
["AT5G13930","black","Encodes chalcone synthase (CHS), a key enzyme involved in the biosynthesis of flavonoids. Required for the accumulation of purple anthocyanins in leaves and stems. Also involved in the regulation of auxin transport and the modulation of root gravitropism. The mRNA is cell-to-cell mobile.","TRANSPARENT TESTA 4 (TT4)","CHALCONE SYNTHASE (CHS); (ATCHS);TRANSPARENT TESTA 4 (TT4)"]
["AT4G09350","black","Chaperone DnaJ-domain superfamily protein;(source:Araport11)","NADH DEHYDROGENASE-LIKE COMPLEX T (NdhT)","CHLORORESPIRATORY REDUCTION J (CRRJ);NADH DEHYDROGENASE-LIKE COMPLEX T (NdhT);DNA J PROTEIN C75 (DJC75)"]
["AT1G71697","black","Encodes choline kinase. mRNA levels are increased in response to wounding. The mRNA is cell-to-cell mobile.","CHOLINE KINASE 1 (CK1)","CHOLINE KINASE 1 (ATCK1);CHOLINE/ETHANOLAMINE KINASE 1 (CEK1);CHOLINE KINASE 1 (CK1);CHOLINE KINASE (CK)"]
["AT4G19020","black","Encodes a plant DNA methyltransferase that methylates mainly cytosines in CHH (H = any base but G) contexts. It is involved in heat tolerance.","CHROMOMETHYLASE 2 (CMT2)","CHROMOMETHYLASE 2 (CMT2)"]
["AT2G30490","black","Encodes a cinnamate-4-hydroxylase. Mutations in this gene impact phenylpropanoid metabolism, growth and development.","CINNAMATE-4-HYDROXYLASE (C4H)","CINNAMATE 4-HYDROXYLASE (ATC4H);CINNAMATE-4-HYDROXYLASE (C4H); (CYP73A5);REDUCED EPRDERMAL FLUORESCENCE 3 (REF3)"]
["AT1G68540","black","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)","TETRAKETIDE ALPHA-PYRONE REDUCTASE 2 (TKPR2)","CINNAMOYL COA REDUCTASE-LIKE 6 (CCRL6);TETRAKETIDE ALPHA-PYRONE REDUCTASE 2 (TKPR2)"]
["AT4G34230","black","Encodes a catalytically active cinnamyl alcohol dehydrogenase which uses p-coumaryl aldehyde as a preferred substrate. It can also use sinapyl, caffeyl, coniferyl and d-hydroxyconiferyl aldehydes as substrates.","CINNAMYL ALCOHOL DEHYDROGENASE 5 (CAD5)","CINNAMYL ALCOHOL DEHYDROGENASE 5 (CAD5);CINNAMYL ALCOHOL DEHYDROGENASE 5 (CAD-5);CINNAMYL ALCOHOL DEHYDROGENASE 5 (ATCAD5)"]
["AT3G58750","black","Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development.","CITRATE SYNTHASE 2 (CSY2)","CITRATE SYNTHASE 2 (CSY2)"]
["AT5G20420","black","Involved in gene silencing. Locus-specific regulator of 24nt-siRNA expression, works together with CLSY1-4 as the master regulators of essentially all Pol-IV-dependent 24nt-siRNAs.","CHROMATIN REMODELING 42 (CHR42)","CLASSY2 (CLSY2);CHROMATIN REMODELING 42 (CHR42)"]
["AT3G04680","black","Encodes a nuclear protein that functions in mRNA processing. Mutations in this gene cause embryo lethality and reduced transmission through the female gametophyte. Over-expression of a CLPS3:TAP protein changes the relative levels of two alternatively processed FCA transcripts. It also causes abnormal phyllotaxy and flower development, early flowering under long and short days, and increased levels of CUC1 and WUS expression.","CLP-SIMILAR PROTEIN 3 (CLPS3)","CLP-SIMILAR PROTEIN 3 (CLPS3)"]
["AT5G54440","black","Encodes a putative TRAPPII tethering factor required for cell plate assembly during cytokinesis. Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.","CLUB (CLUB)","CLUB (CLUB); (AtTRS130); (TRAPPC10); (TRS130)"]
["AT1G14560","black","Encodes a mitochondrial CoA transporter.","COA CARRIER 1 (COAC1)","COA CARRIER 1 (COAC1)"]
["AT4G26180","black","Encodes a mitochondrial CoA transporter.","COA CARRIER 2 (COAC2)","COA CARRIER 2 (COAC2)"]
["AT5G60920","black","Encodes a glycosylphosphatidylinositol-anchored protein localized primarily in the plasma membrane of the longitudinal sides of root cells. Necessary for oriented cell expansion in Arabidopsis. Cob mutants have abnormal roots that expand radially rather than longitudinally under certain growth conditions.","COBRA (COB)","COBRA (COB)"]
["AT1G45688","black","CC1 is a plant specific gene that interacts with with the cellulose synthase complex and microtubules. It appears to play a role in localizing CESA to the membrane, microtuble dynamics , particularly during salt stress.","COMPANION OF CELLULOSE SYNTHASE 1 (CC1)","COMPANION OF CELLULOSE SYNTHASE 1 (CC1)"]
["AT2G41990","black","late embryogenesis abundant protein;(source:Araport11)","COMPANION OF CELLULOSE SYNTHASE 3 (CC3)","COMPANION OF CELLULOSE SYNTHASE 3 (CC3)"]
["AT2G34560","black","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","CONSERVED IN CILIATED SPECIES AND IN THE LAND PLANTS 1 (CCP1)","CONSERVED IN CILIATED SPECIES AND IN THE LAND PLANTS 1 (CCP1); (ATCCP1)"]
["AT1G73430","black","COG3 is a component of a putative conserved oligomeric Golgi (COG) complex that is thought to be involved in tethering of retrograde intra Golgi vesicles. In mutant pollen,golgi appear abnormal. It is required for proper deposition of cell wall materials in pollen tube growth. When homozygotes can be produced (by complementing the defect in pollen), the plants are embryo lethal suggesting an essential function. COG3 interacts with several other putative COG components.","CONSERVED OLIGOMERIC GOLGI COMPLEX 3 (COG3)","CONSERVED OLIGOMERIC GOLGI COMPLEX 3 (COG3)"]
["AT5G53420","black","Member of ASML2 family of CCT domain proteins.There is a preferential accumulation of RNA isoforms CCT101.1 and CCT101.2 in response to N-treatment, each isoform has different targets.","CONSTANS, CO-LIKE AND TOC1 MOTIF; (CCT101)","CONSTANS, CO-LIKE AND TOC1 MOTIF; (CCT101)"]
["AT5G63440","black","Encodes a single copy protein in Arabidopsis containing a DUF167 domain that is conserved in eukaryotes. Genetically CSU suppresses mutations in COP1. In vitro, it interacts with CACTIN and in vivo with CCA1. CSU4 promotes photomorphogenesis via negative regulation of CCA1 and PIF4 expression.","COP1 SUPPRESSOR 4 (CSU4)","COP1 SUPPRESSOR 4 (CSU4);CACTIN (CTN)"]
["AT4G27430","black","Positive regulator of light-regulated genes. Novel nuclear protein which requires light for its high level expression. The mRNA is cell-to-cell mobile.","COP1-INTERACTING PROTEIN 7 (CIP7)","COP1-INTERACTING PROTEIN 7 (CIP7)"]
["AT5G41790","black","encodes a protein that physically interacts specifically with the putative coiled-coil region of COP1 in vitro. In hypocotyl and cotyledon protoplasts, it is associated to the cytoskeleton, but not in the root. expression is not regulated by light. The mRNA is cell-to-cell mobile.","COP1-INTERACTIVE PROTEIN 1 (CIP1)","COP1-INTERACTIVE PROTEIN 1 (CIP1)"]
["AT5G42360","black","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)","COP9 SIGNALOSOME INTERACTING F-BOX KELCH 2 (CFK2)","COP9 SIGNALOSOME INTERACTING F-BOX KELCH 2 (CFK2)"]
["AT3G56240","black","CCH protein belongs to a family of eukaryotic proteins that participate in intracellular copper homeostasis by delivering this metal to the secretory pathway; mainly located along the vascular bundles of senescing leaves and petioles as well as in stem sieve elements; hypothesized to have a role in copper mobilization from decaying organs towards reproductive structures, as a result of metalloprotein breakdown. The plant-specific C-terminal domain of the CCH protein forms amyloid-like fibrils in vitro.","COPPER CHAPERONE (CCH)","COPPER CHAPERONE (CCH);HEAVY METAL ASSOCIATED PROTEIN 31 (ATHMP31)"]
["AT5G65810","black","Encodes CGR3 (cotton Golgi-related 3). CGR3 and a close homologue CGR2 have overlapping roles in pectin methylesterification and plant growth.","COTTON GOLGI-RELATED 3 (CGR3)","COTTON GOLGI-RELATED 3 (CGR3)"]
["AT1G28680","black","Catalyses trans-cis isomerization and lactonization in the biosynthesis of coumarins in roots.","COUMARIN SYNTHASE (COSY)","COUMARIN SYNTHASE (COSY)"]
["AT3G59420","black","Encodes a membrane localized protein with similarity to receptor kinases which is involved in epidermal cell differentiation. Flowers of mutants have disorganized ovule integument growth and abnormal sepal margins. In the roots, mutants initiate more lateral roots but fewer laterals actually emerge due to defects in lateral root formation. Mutants also display disorganized columella. The root phenotypes can be traced to abnormalities in asymmetric divisions in the pericycle and root apex. Conflicting data regarding the role of the kinase domain- which may or may not be required for function. Complementation studies indicate that the C-terminal domain is also not required for signaling function. May be regulated by protein turnover which is mediated by endocytic processes. ACR4 phosphorylates the PROTEIN PHOSPHATASE 2A-3 (PP2A-3) catalytic subunit of the PP2A phosphatase holoenzyme and PP2A","CRINKLY4 (CR4)","CRINKLY4 (ACR4);CRINKLY4 (CR4)"]
["AT4G36280","black","Member of the microrchidia protein family which have been described as epigenetic regulators and plant immune mediators, contains a hallmark GHKL-type ATPase domain in N-terminus.","CRT1 HOMOLOGUE 1 (CRH1)","CRT1 HOMOLOGUE 1 (CRH1); (ATMORC2);MICRORCHIDIA 2 (MORC2)"]
["AT1G10120","black","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)","CRY2-INTERACTING BHLH 4 (CIB4)","CRY2-INTERACTING BHLH 4 (CIB4)"]
["AT4G08920","black","Encodes CRY1, a flavin-type blue-light photoreceptor with ATP binding and autophosphorylation activity. Functions in perception of blue / green ratio of light. The photoreceptor may be involved in electron transport. Mutant phenotype displays a blue light-dependent inhibition of hypocotyl elongation. Photoreceptor activity requires light-induced homodimerisation of the N-terminal CNT1 domains of CRY1. Involved in blue-light induced stomatal opening. The C-terminal domain of the protein undergoes a light dependent conformational change. Also involved in response to circadian rhythm. Mutants exhibit long hypocotyl under blue light and are out of phase in their response to circadian rhythm. CRY1 is present in the nucleus and cytoplasm. Different subcellular pools of CRY1 have different functions during photomorphogenesis of Arabidopsis seedlings. The mRNA is cell-to-cell mobile.","CRYPTOCHROME 1 (CRY1)","CRYPTOCHROME 1 (CRY1);BLUE LIGHT UNINHIBITED 1 (BLU1);ELONGATED HYPOCOTYL 4 (HY4);OUT OF PHASE 2 (OOP2); (ATCRY1)"]
["AT1G26260","black","Encodes CIB5 (cryptochrome-interacting basic-helix-loop-helix). Related to CIB1 (AT4G34530). CIB5 interacts with CRY2 and forms heterodimer with CIB1 in vitro. Regulates flowering time redundantly with CIB1.","CRYPTOCHROME-INTERACTING BASIC-HELIX-LOOP-HELIX 5 (CIB5)","CRYPTOCHROME-INTERACTING BASIC-HELIX-LOOP-HELIX 5 (CIB5)"]
["AT3G49390","black","RNA-binding protein, putative, RNA-binding protein RBP37, Arabidopsis thaliana, PIR:T04196.Member of a family of PAB2 domain containing proteins.","CTC-INTERACTING DOMAIN 10 (CID10)","CTC-INTERACTING DOMAIN 10 (CID10)"]
["AT3G14450","black","RNA-binding protein, putative, contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies). Contains PAM PABC binding domain.","CTC-INTERACTING DOMAIN 9 (CID9)","CTC-INTERACTING DOMAIN 9 (CID9)"]
["AT5G49660","black","The gene encodes receptorlike kinase (RLK). Involved in the maintenance organization of cell files or cell morphology in conductive elements. Functions as a receptor for CEP1 peptide. Mediates nitrate uptake signaling.","XYLEM INTERMIXED WITH PHLOEM 1 (XIP1)","C-TERMINALLY ENCODED PEPTIDE RECEPTOR 1 (CEPR1);XYLEM INTERMIXED WITH PHLOEM 1 (XIP1)"]
["AT1G72180","black","Encodes a leucine-rich repeat receptor kinase that functions as a receptor for CEP1 peptide. Mediates nitrate uptake signaling.","C-TERMINALLY ENCODED PEPTIDE RECEPTOR 2 (CEPR2)","C-TERMINALLY ENCODED PEPTIDE RECEPTOR 2 (CEPR2)"]
["AT3G18210","black","Belongs to the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily proteins and contains an oxoglutarate/iron-dependent oxygenase domain (InterPro:IPR005123) of the prolyl 4-hydroxylase, alpha subunit subtype (P4Hc; InterPro:IPR006620), participates in epigenetic repression of flowering genes, works redundantly with ICU11 to repress several members of the MADS-box transcription factors family, during vegetative development via histone modification.","CUPULIFORMIS2 (CP2)","CUPULIFORMIS2 (CP2)"]
["AT2G39360","black","Protein kinase superfamily protein;(source:Araport11)","CURVY1 (CVY1)","CURVY1 (CVY1)"]
["AT1G68530","black","Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","3-KETOACYL-COA SYNTHASE 6 (KCS6)","CUTICULAR 1 (CUT1);POLLEN-PISTIL INCOMPATIBILITY 1 (POP1);ECERIFERUM 6 (CER6); (ATCER6);3-KETOACYL-COA SYNTHASE 6 (KCS6); (ATCUT1); (G2)"]
["AT2G32010","black","Encodes an inositol polyphosphate 5?-phosphatase (5PTase). Mediating phosphoinositide signaling. Involved in establishment of foliar vein patterns.","CVP2 LIKE 1 (CVL1)","CVP2 LIKE 1 (CVL1)"]
["AT4G35220","black","Cyclase family protein;(source:Araport11)","CYCLASE2 (CYCLASE2)","CYCLASE2 (CYCLASE2)"]
["AT4G30560","black","member of Cyclic nucleotide gated channel family. Required for constitutive growth of root hairs as Ca2+-permeable channels.","CYCLIC NUCLEOTIDE GATED CHANNEL 9 (CNGC9)","CYCLIC NUCLEOTIDE GATED CHANNEL 9 (ATCNGC9);CYCLIC NUCLEOTIDE GATED CHANNEL 9 (CNGC9)"]
["AT4G30360","black","member of Cyclic nucleotide gated channel family","CYCLIC NUCLEOTIDE-GATED CHANNEL 17 (CNGC17)","CYCLIC NUCLEOTIDE-GATED CHANNEL 17 (ATCNGC17);CYCLIC NUCLEOTIDE-GATED CHANNEL 17 (CNGC17)"]
["AT3G63120","black","cyclin p1;(source:Araport11)","CYCLIN P1;1 (CYCP1;1)","CYCLIN P1;1 (CYCP1;1)"]
["AT2G45080","black","cyclin p3;(source:Araport11)","CYCLIN P3;1 (cycp3;1)","CYCLIN P3;1 (cycp3;1)"]
["AT1G18040","black","cyclin-dependent kinase D1;(source:Araport11)","CYCLIN-DEPENDENT KINASE D1;3 (CDKD1;3)","CYCLIN-DEPENDENT KINASE D1;3 (CDKD1;3); (CAK2AT);CYCLIN-DEPENDENT KINASE D1;3 (AT;CDCKD;3)"]
["AT2G29960","black","encodes a cyclophilin protein that exhibits peptidylprolyl cis/trans-isomerase and protein refolding activities that were sensitive to cyclosporin A. The protein interacts with GNOM in vitro and is localized to both the cytosolic and membrane fractions. The gene is expressed in the developing embryo.","CYCLOPHILIN 5 (CYP5)","CYCLOPHILIN 5 (CYP5);ARABIDOPSIS THALIANA CYCLOPHILIN 5 (ATCYP5);CYCLOPHILIN 19-4 (CYP19-4)"]
["AT3G55920","black","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11)","CYCLOPHYLIN 12-2 (CYP21-2)","CYCLOPHYLIN 12-2 (CYP21-2)"]
["AT4G34960","black","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11)","CYCLOPHYLIN 21-1 (CYP21-1)","CYCLOPHYLIN 21-1 (CYP21-1)"]
["AT3G04940","black","Encodes cysteine synthase CysD1.","CYSTEINE SYNTHASE D1 (CYSD1)","CYSTEINE SYNTHASE D1 (ATCYSD1);CYSTEINE SYNTHASE D1 (CYSD1)"]
["AT3G22235","black","cysteine-rich TM module stress tolerance protein;(source:Araport11)","CYSTEINE-RICH TRANSMEMBRANE MODULE 8 (ATHCYSTM8)","CYSTEINE-RICH TRANSMEMBRANE MODULE 8 (ATHCYSTM8)"]
["AT5G38630","black","Encodes for cytochrome b561 involved in ascorbate recycling.","CYTOCHROME B561-1 (CYB-1)","CYTOCHROME B561-1 (ACYB-1);CYTOCHROME B561-1 (CYB-1)"]
["AT1G13080","black","cytochrome P450 monooxygenase","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 2 (CYP71B2)","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 2 (CYP71B2)"]
["AT5G04660","black","encodes a protein with cytochrome P450 domain; catalyzes the epoxidation of unsaturated fatty acids. Mediates direct balancing of lipid mobilization and ROS production by the epoxidation of fatty acid during seed germination.","CYTOCHROME P450, FAMILY 77, SUBFAMILY A, POLYPEPTIDE 4 (CYP77A4)","CYTOCHROME P450, FAMILY 77, SUBFAMILY A, POLYPEPTIDE 4 (CYP77A4)"]
["AT4G00360","black","Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems.","CYTOCHROME P450, FAMILY 86, SUBFAMILY A, POLYPEPTIDE 2 (CYP86A2)","CYTOCHROME P450, FAMILY 86, SUBFAMILY A, POLYPEPTIDE 2 (CYP86A2);ABERRANT INDUCTION OF TYPE THREE 1 (ATT1)"]
["AT2G45970","black","Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems.Mutant seeds have reduced seed longevity, higher tetrazolium salt uptake and reduction, and reduced lipid polyester barriers (PMID:32519347).","CYTOCHROME P450, FAMILY 86, SUBFAMILY A, POLYPEPTIDE 8 (CYP86A8)","CYTOCHROME P450, FAMILY 86, SUBFAMILY A, POLYPEPTIDE 8 (CYP86A8);LACERATA (LCR)"]
["AT1G68550","black","encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.","CYTOKININ RESPONSE FACTOR 10 (CRF10)","CYTOKININ RESPONSE FACTOR 10 (CRF10)"]
["AT1G57620","black","emp24/gp25L/p24 family/GOLD family protein;(source:Araport11)","CYTOPLASMIC BODIES (CYB)","CYTOPLASMIC BODIES (CYB)"]
["AT2G29560","black","Encodes a putative phosphoenolpyruvate enolase that is localized both to the nucleus and the cytoplasm. The mRNA is cell-to-cell mobile.","CYTOSOLIC ENOLASE (ENOC)","CYTOSOLIC ENOLASE (ENOC);ENOLASE 3 (ENO3)"]
["AT4G36400","black","Encodes a (D)-2-hydroxyglutarate dehydrogenase.","D-2-HYDROXYGLUTARATE DEHYDROGENASE (D2HGDH)","D-2-HYDROXYGLUTARATE DEHYDROGENASE (D2HGDH)"]
["AT4G26610","black","D6PK family kinase involved in pulse-induced phototropism but also for time-dependent second positive phototropism, and continuous light-induced hypocotyl phototropism.","D6 PROTEIN KINASE LIKE 1 (D6PKL1)","D6 PROTEIN KINASE LIKE 1 (D6PKL1); (AGC1-2)"]
["AT1G19270","black","Encodes a ubiquitin-activated peptidase that is a member of a small (7 member) ubiquitin binding protein family. It appears to play a role in regulation of endoreduplication in leaf epidermal tissue. Together with CUC2/CUC3-UBP15 part of a regulatory module which controls the initiation of axillary meristems, thereby determining plant architecture.DA1, DAR1 and DAR2 function redundantly to cleave proteins that promote cell growth. These include signalling receptors (eg TMK1), transcription factors (eg TCP14, 15 and 22; WOX1, 3 and 5) and diverse other growth promoters. Loss of function leads to larger organs with more cells. During organ growth DA1 family members appear to limit the extent of cell proliferation (PMID:36161927).","DA (LARGE IN CHINESE) 1 (DA1)","DA (LARGE IN CHINESE) 1 (DA1)"]
["AT5G66610","black","DA1-related protein 7;(source:Araport11)","DA1-RELATED PROTEIN 7 (DAR7)","DA1-RELATED PROTEIN 7 (DAR7)"]
["AT2G30550","black","Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.","DAD1-LIKE LIPASE 3 (DALL3)","DAD1-LIKE LIPASE 3 (DALL3)"]
["AT5G25580","black","hypothetical protein;(source:Araport11)","DDT-RELATED PROTEIN5 (DDR5)","DDT-RELATED PROTEIN5 (DDR5)"]
["AT2G27290","black","located in chloroplast, high expression in mature leaf. Mediates assembly of the cytochrome b6f complex.","DE-ETIOLATION-INDUCED PROTEIN 1 (DEIP1)","DE-ETIOLATION-INDUCED PROTEIN 1 (DEIP1)"]
["AT3G49250","black","Similar to hinge-domain region of structural maintenance of chromosomes (SMC)proteins.Putative chromosome architecture protein that can potentialy link nucleic acids in facilitating an RNA1-mediated epigenetic modification involving secondary siRNA and spreading of DNA methylation.","DEFECTIVE IN MERISTEM SILENCING 3 (DMS3)","DEFECTIVE IN MERISTEM SILENCING 3 (DMS3);INVOLVED IN DE NOVO 1 (IDN1)"]
["AT1G55350","black","Similar to maize DEK1, a gene encoding a membrane protein of the calpain gene superfamily required for aleurone cell development in the endosperm of maize grains. A key component of the embryonic L1 cell-layer specification pathway. It localizes to membranes and undergoes intramolecular autolytic cleavage events that release the calpain domain into the cytoplasm.","DEFECTIVE KERNEL 1 (DEK1)","DEFECTIVE KERNEL 1 (DEK1);EMBRYO DEFECTIVE 1275 (EMB1275); (ATDEK1);EMBRYO DEFECTIVE 80 (EMB80)"]
["AT5G15410","black","defense, no death' gene (DND1) encodes a mutated cyclic nucleotide-gated cation channel; Same as CNGC2 (article ID 229): Cyclic nucleotide gated channel, activated by cAMP, conducts K+ and other monovalent cations but excludes Na+, does not contain the GYG amino acid sequence found in other channels with this conductivity profile. Conducts Ca2+ into cells which is linked to the generation of NO and the NO signaling pathway involved in the innate immune response to pathogens. CNGC2 could be the key step mediating bulk Ca2+ influx into leaf cells after unloading from the vascular and have no direct roles in the leaf development and HR.","DEFENSE NO DEATH 1 (DND1)","DEFENSE NO DEATH 1 (DND1);CYCLIC NUCLEOTIDE GATED CHANNEL 2 (CNGC2);CYCLIC NUCLEOTIDE-GATED CHANNEL 2 (ATCNGC2)"]
["AT1G19570","black","Encodes a member of the dehydroascorbate reductase gene family. Critical for a mutualistic symbiosis between the host Arabidopsis and the root colonizing fungus Piriformospora indica.Encodes about 50-60% of extractable leaf GSH-dependent DHAR activity, but single knockout mutants show unaltered ascorbate and glutathione status in optimal and oxidative stress conditions (PMID:28381499). Acts redundantly with DHAR2 to oxidize glutathione in response to increased intracelullar hydrogen peroxide (catalase deficiency). Complementation of a cat2 dhar1 dhar2 dhar3 quadruple mutant with DHAR1 fully restores cat2 phenotype and pathogenesis-related responses(PMID:28381499).","DEHYDROASCORBATE REDUCTASE (DHAR1)","DEHYDROASCORBATE REDUCTASE (DHAR1);DEHYDROASCORBATE REDUCTASE 5 (DHAR5); (ATDHAR1)"]
["AT3G20210","black","Encodes a vacuolar processing enzyme with caspase-1-like activity that is specifically expressed in inner integument of developing seeds. Mutants display abnormal seed coat development. It is speculated to be involved in cell death of limited cell layers, the purpose of which is to form a seed coat.","DELTA VACUOLAR PROCESSING ENZYME (DELTA-VPE)","DELTA VACUOLAR PROCESSING ENZYME (DELTA-VPE);DELTA VACUOLAR PROCESSING ENZYME (DELTAVPE);ASPARAGINYL ENDOPEPTIDASE 4 (AEP4)"]
["AT4G04860","black","DERLIN-2.2;(source:Araport11)","DERLIN-2.2 (DER2.2)","DERLIN-2.2 (DER2.2)"]
["AT1G48320","black","Encodes one of the two functional DHNA-CoA (1,4-dihydroxy-2-naphthoyl-CoA) thioesterases found in Arabidopsis.","DHNA-COA THIOESTERASE 1 (DHNAT1)","DHNA-COA THIOESTERASE 1 (DHNAT1)"]
["AT3G51520","black","Encodes a functional acyl-CoA:diacylglycerol acyltransferase with different acyl-CoA substrate preferences and shows higher DAG to TAG conversion rate than AtDGAT1. It increases both C18:2 and C18:3 polyunsaturated fatty acids at the expense of C16:0.","DIACYLGLYCEROL ACYLTRANSFERASE 2 (DGAT2)","DIACYLGLYCEROL ACYLTRANSFERASE 2 (DGAT2); (ATDGAT2)"]
["AT5G63770","black","a member of the diacylglycerol kinase gene family. Encodes a functional diacylglycerol kinase. Involved in root elongation and plant development. Gene expression is induced by wounding or cold.","DIACYLGLYCEROL KINASE 2 (DGK2)","DIACYLGLYCEROL KINASE 2 (DGK2);DIACYLGLYCEROL KINASE 2 (ATDGK2)"]
["AT3G58090","black","Member of dirigent protein family. Members have been found to mediate regio-and stereoselectivity of bimolecular phenoxy radical coupling during lignan biosynthesis.","DIRIGENT PROTEIN 17 (DIR17)","DIRIGENT PROTEIN 17 (DIR17)"]
["AT1G55210","black","Disease resistance-responsive (dirigent-like protein) family protein;(source:Araport11)","DIRIGENT PROTEIN 20 (DIR20)","DIRIGENT PROTEIN 20 (DIR20)"]
["AT3G13310","black","Chaperone DnaJ-domain superfamily protein;(source:Araport11)","DNA J PROTEIN C66 (DJC66)","DNA J PROTEIN C66 (DJC66)"]
["AT2G18465","black","Chaperone DnaJ-domain superfamily protein;(source:Araport11)","DNA J PROTEIN C72 (DJC72)","DNA J PROTEIN C72 (DJC72)"]
["AT1G08130","black","Encodes the Arabidopsis DNA ligase 1 that provides the major DNA ligase activity in cells and plays a key role in both DNA replication and excision repair pathways. In addition, it is an important component of the active DNA demethylation machinery and is indispensable for cell viability. AtLIG1 expresses one major and two minor mRNA transcripts differing only in the length of the 5' untranslated leader sequences preceding a common ORF. Translation from the first in-frame start codon produces an AtLIG1 isoform that is targeted exclusively to the mitochondria. Translation initiation from the second in-frame start codon produces an AtLIG1 isoform targeted only to the nucleus.","DNA LIGASE 1 (LIG1)","DNA LIGASE 1 (LIG1);DNA LIGASE 1 (ATLIG1)"]
["AT2G25620","black","Encodes DBP1, a member of the DBP factors (DNA-binding protein phosphatases) featuring sequence-specific DNA-binding and protein phosphatase activity. DBP1 is involved in plant-potyvirus interactions. Loss-of-function of DBP1 renders resistance to potyviruses. Negatively regulates drought and salt tolerance through altering leaf surface permeability.","DNA-BINDING PROTEIN PHOSPHATASE 1 (DBP1)","DNA-BINDING PROTEIN PHOSPHATASE 1 (AtDBP1);DNA-BINDING PROTEIN PHOSPHATASE 1 (DBP1)"]
["AT5G60300","black","Encodes a legume-type lectin receptor kinase that is structurally distinct from the mammalian extracellular ATP receptors and acts as an extracellular ATP receptor in Arabidopsis. Extracellular ATP acts as a damage-associated molecular pattern in plants, and its signaling through P2K1 is important for mounting an effective defense response against various pathogenic microorganisms. It also plays a role in cell wall-plasma membrane adhesion.","L-TYPE LECTIN RECEPTOR KINASE I.9 (LecRK-I.9)","DOES NOT RESPOND TO NUCLEOTIDES 1 (DORN1); (P2K1);L-TYPE LECTIN RECEPTOR KINASE I.9 (LecRK-I.9)"]
["AT2G46590","black","Encodes a protein containing Dof zinc finger motifs that is a positive regulator of light-mediated seed germination. Its expression is limited to vascular system of the mother plant. A recessive mutation is inherited as maternal-effect and expression is not detected in the embryo. Mutants are defective in seed germination and are more dependent on light and cold treatment and less sensitive to gibberellin during seed germination. It plays its main role downstream of PIL5 and DAG1 in the phytochrome B (phyB)-mediated pathway.","DOF AFFECTING GERMINATION 2 (DAG2)","DOF AFFECTING GERMINATION 2 (DAG2)"]
["AT3G45040","black","Encodes a putative dolichol kinase that is localized to the endoplasmic reticulum and involved in pollen tube reception in the female gametophyte.","DOLICHOL KINASE 1 (DOK1)","DOLICHOL KINASE 1 (DOK1); (ATDOK1);EVAN (EVN)"]
["AT1G03300","black","Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype","DOMAIN OF UNKNOWN FUNCTION 724 1 (ATDUF1)","DOMAIN OF UNKNOWN FUNCTION 724 1 (ATDUF1);DOMAIN OF UNKNOWN FUNCTION 724 1 (DUF1)"]
["AT1G11420","black","Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins.","DOMAIN OF UNKNOWN FUNCTION 724 2 (DUF2)","DOMAIN OF UNKNOWN FUNCTION 724 2 (DUF2);DOMAIN OF UNKNOWN FUNCTION 724 2 (ATDUF2)"]
["AT4G02200","black","Drought-responsive family protein;(source:Araport11)","DROUGHT INDUCED LIKE9-5 (ATDIL9-5)","DROUGHT INDUCED LIKE9-5 (ATDIL9-5)"]
["AT2G28380","black","Encodes a cytoplasmic dsRNA-binding protein DRB2. A maternally expressed imprinted gene. DRB2 and DRB4 have an antagonistic impact on polymerase IV-dependent siRNA levels.","DSRNA-BINDING PROTEIN 2 (DRB2)","DSRNA-BINDING PROTEIN 2 (DRB2); (ATDRB2)"]
["AT3G26932","black","dsRNA-binding protein 3;(source:Araport11)","DSRNA-BINDING PROTEIN 3 (DRB3)","DSRNA-BINDING PROTEIN 3 (DRB3)"]
["AT3G23610","black","Encodes a dual specificity protein phosphatase whose activity is modulated by CaM binding.","DUAL SPECIFICITY PROTEIN PHOSPHATASE 1 (DSPTP1)","DUAL SPECIFICITY PROTEIN PHOSPHATASE 1 (DSPTP1)"]
["AT4G35560","black","Target promoter of the male germline-specific transcription factor DUO1. The mRNA is cell-to-cell mobile.","DUO1-ACTIVATED WD40 1 (DAW1)","DUO1-ACTIVATED WD40 1 (DAW1);TOMOSYN-LIKE (TMS-LIKE)"]
["AT3G03990","black","Encodes an alpha/beta hydrolase essential for strigolactone signaling. Degradation of the protein is promoted by strigolactone. The mRNA is cell-to-cell mobile.","DWARF 14 (D14)","DWARF 14 (D14)"]
["AT1G50430","black","Mutants are defective in Brassinosteroid biosynthesis (delta7-sterol-C7 reduction step) and have a dwarf phenotype. EXO70 interactor and presumed negative secretion regulator.","DWARF 5 (DWF5)","DWARF 5 (DWF5);PARVA (PA);LEPIDA (LE);STEROL DELTA7 REDUCTASE (ST7R);DELTA5,7-STEROL DELTA7 REDUCTASE (7RED)"]
["AT5G50100","black","Encodes a putative thioredoxin DCC1 involved in determining shoot regeneration capacity. It interacts directly with CARBONIC ANHYDRASE 2 (CA2), an essential subunit of respiratory chain NADH dehydrogenase complex (Complex I) and regulates Complex I activity via redox modification of CA2.","DXXCXXC MOTIF 1 (DCC1)","DXXCXXC MOTIF 1 (DCC1)"]
["AT4G14690","black","Encodes an early light-induced protein. ELIPs are thought not to be directly involved in the synthesis and assembly of specific photosynthetic complexes, but rather affect the biogenesis of all chlorophyll-binding complexes. A study (PMID 17553115) has shown that the chlorophyll synthesis pathway was downregulated as a result of constitutive ELIP2 expression, leading to decreased chlorophyll availability for the assembly of pigment-binding proteins for photosynthesis.","EARLY LIGHT-INDUCIBLE PROTEIN 2 (ELIP2)","EARLY LIGHT-INDUCIBLE PROTEIN 2 (ELIP2)"]
["AT4G27520","black","early nodulin-like protein 2;(source:Araport11)","EARLY NODULIN-LIKE PROTEIN 2 (ENODL2)","EARLY NODULIN-LIKE PROTEIN 2 (ENODL2); (AtENODL2)"]
["AT3G55360","black","Enoyl-CoA reductase is involved in all very long chain fatty acids (VLCFA) elongation reactions that are required for cuticular wax, storage lipid and sphingolipid metabolism. The protein is located in the ER, but in contrast to its yeast homolog TSC13 is not particularly enriched in the nuclear envelope-vacuole junction. Mutants in this gene show abnormal organ morphology and stem glossiness. Cells in all tissues are only about 1/3 of the size of wild type cells. The morphological changes are most likely to result from the reduction in the VLCFA content of sphingolipids. Mutants also show abnormalities in the endocytic membrane organization and transport as well as reduced trichome papillae.","ECERIFERUM 10 (CER10)","ECERIFERUM 10 (CER10);ENOYL-COA REDUCTASE (ECR); (CER10); (ATTSC13); (TSC13);GLASSY HAIR 6 (GLH6)"]
["AT4G13840","black","HXXXD-type acyl-transferase family protein;(source:Araport11)","ECERIFERUM 26 (CER26)","ECERIFERUM 26 (CER26)"]
["AT1G09330","black","ECHIDNA localizes to the TGN, and has been shown to function in the vacuolar sorting pathway of cell wall components ,mucilage, and wax.","ECHIDNA (ECH)","ECHIDNA (ECH)"]
["AT5G15440","black","EID1-like 1;(source:Araport11)","EID1-LIKE 1 (EDL1)","EID1-LIKE 1 (EDL1)"]
["AT1G50940","black","Encodes the electron transfer flavoprotein ETF alpha, a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF beta is At5g43430.1) in Arabidopsis. Mutations of the ETF beta gene results in accelerated senescence and early death compared to wild-type during extended darkness.","ELECTRON TRANSFER FLAVOPROTEIN ALPHA (ETFALPHA)","ELECTRON TRANSFER FLAVOPROTEIN ALPHA (ETFALPHA)"]
["AT1G72630","black","ELF4-like 2;(source:Araport11)","ELF4-LIKE 2 (ELF4-L2)","ELF4-LIKE 2 (ELF4-L2)"]
["AT5G48230","black","Encodes an acetoacetyl-CoA thiolase that generates the bulk of the acetoacetyl-CoA precursor needed for the cytosolic localized, mevalonate-derived isoprenoids biosynthetic pathway. Loss-of-function mutants are embryo lethal.","ACETOACETYL-COA THIOLASE 2 (ACAT2)","EMBRYO DEFECTIVE 1276 (EMB1276);ACETOACETYL-COA THIOLASE 2 (ACAT2);ACETOACETYL-COA THIOLASE 2 (AACT2)"]
["AT3G12670","black","Cytidine triphosphate synthase; essential for CTP supply in developing embryos.","EMBRYO DEFECTIVE 2742 (emb2742)","EMBRYO DEFECTIVE 2742 (emb2742);CTP SYNTHASE 2 (CTPS2)"]
["AT2G03870","black","Small nuclear ribonucleoprotein family protein;(source:Araport11)","EMBRYO DEFECTIVE 2816 (EMB2816)","EMBRYO DEFECTIVE 2816 (EMB2816);SM-LIKE 7 (LSM7)"]
["AT2G41350","black","Encodes AUG1, likely to be in an augmin-like complex with AUG3.","AUGMIN 1 (AUG1)","EMBRYO DEFECTIVE 2819 (EMB2819);AUGMIN 1 (AUG1); (AtAUG1)"]
["AT2G30920","black","The enzyme encoded by this gene has been shown to complement the Saccharomyces cerevisiae coq3 mutation and, therefore, to have hexaprenyldihydroxybenzoate methyltransferase activity. It is however likely that, in Arabidopsis, the enzyme catalyzes the methylation of nonaprenyldihydroxybenzoate as it is the prevalent polyprenoid in this plant species. The enzyme is a mitochondrial-localized methyltransferase involved in ubiquinone biosynthesis.","COENZYME Q 3 (COQ3)","EMBRYO DEFECTIVE 3002 (EMB3002); (COQ3);COENZYME Q 3 (COQ3);COENZYME Q 3 (ATCOQ3)"]
["AT1G34430","black","2-oxoacid dehydrogenases acyltransferase family protein;(source:Araport11)","EMBRYO DEFECTIVE 3003 (EMB3003)","EMBRYO DEFECTIVE 3003 (EMB3003)"]
["AT3G06350","black","Encodes a bi-functional dehydroquinate-shikimate dehydrogenase enzyme that catalyzes two steps in the chorismate biosynthesis pathway.","MATERNAL EFFECT EMBRYO ARREST 32 (MEE32)","EMBRYO DEFECTIVE 3004 (EMB3004);MATERNAL EFFECT EMBRYO ARREST 32 (MEE32)"]
["AT5G50390","black","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)","EMBRYO DEFECTIVE 3141 (EMB3141)","EMBRYO DEFECTIVE 3141 (EMB3141)"]
["AT2G30200","black","Malonyl-ACP expressed in developing seeds. Loss of function mutants are embryo lethal and over expression in seeds leads to increased seed oil content.","EMBRYO DEFECTIVE 3147 (EMB3147)","EMBRYO DEFECTIVE 3147 (EMB3147);MALONYL COA-ACP MALONYLTRANSFERASE (MCAMT); (MCAT)"]
["AT2G35940","black","Encodes a member of the BEL-like homeodomain protein family. Ecotopic expression in the embryo sac leads to defects in nuclear migration and cellularization and embryo sacs with multiple egg cells. Loss of function alleles have no female gametophyte defects. The ecotopic expression phenotype requires KNAT3 because it can be suppressed by loss of KNAT3 function alleles. Localized to the nucleus but interaction with OFP1 relocates it to the cytoplasm.","BEL1-LIKE HOMEODOMAIN 1 (BLH1)","EMBRYO SAC DEVELOPMENT ARREST 29 (EDA29);BEL1-LIKE HOMEODOMAIN 1 (BLH1)"]
["AT1G16900","black","Encodes the Arabidopsis ortholog of the yeast/human ALG9 catalyzing the luminal addition of two alpha-1,2 Man residues in assembling Glc3Man9GlcNAc2.","EMS-MUTAGENIZED BRI1 SUPPRESSOR 3 (EBS3)","EMS-MUTAGENIZED BRI1 SUPPRESSOR 3 (EBS3)"]
["AT5G62500","black","Encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis.","END BINDING PROTEIN 1B (EB1B)","END BINDING PROTEIN 1B (ATEB1B);END BINDING PROTEIN 1B (EB1B); (ATEB1)"]
["AT2G20680","black","Encodes a mannanase belonging to clade 1 of the GH5 7 phylogenetic tree that exhibits high substrate affinity and catalytic efficiency on mannan substrates with main chains containing both glucose and mannose units such as konjac glucomannan and spruce galactoglucomannan. It is likely a glycoprotein.","(MAN5-2)","ENDO-BETA-MANNASE 2 (MAN2); (AtMAN2); (MAN5-2)"]
["AT4G02980","black","Auxin binding protein involved in cell elongation and cell division. ABP1 is ubiquitinated in vitro and in planta by AtRma2. ABP1 was thought to be embryo lethal but further experimentation has demonstrated that lethality is due to a linked mutation in another gene.","ENDOPLASMIC RETICULUM AUXIN BINDING PROTEIN 1 (ABP1)","ENDOPLASMIC RETICULUM AUXIN BINDING PROTEIN 1 (ABP1); (ABP)"]
["AT1G72280","black","Encodes an oxidoreductin required for oxidative protein folding in the ER and exists in two distinct oxidized isoforms (Ox1 and Ox2), which are determined by the formation or breakage of the putative regulatory disulfide. AtERO1 is mainly present in the Ox1 redox state.","ENDOPLASMIC RETICULUM OXIDOREDUCTINS 1 (ERO1)","ENDOPLASMIC RETICULUM OXIDOREDUCTINS 1 (ERO1);ENDOPLASMIC RETICULUM OXIDOREDUCTINS 1 (AERO1)"]
["AT3G25040","black","Encodes ERD2b. a homolog of the yeast endoplasmic reticulum retention receptor ERD2. Mutations in ERD2b compromise EFR but not FLS2 signaling. The mRNA is cell-to-cell mobile.","ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2B (ERD2B)","ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2B (ERD2B)"]
["AT5G05190","black","hypothetical protein (DUF3133);(source:Araport11)","ENHANCED DISEASE RESISTANCE4 (EDR4)","ENHANCED DISEASE RESISTANCE4 (EDR4)"]
["AT5G22090","black","EAR1 is a negative regulator of ABA signaling that enhances the activity of all six clade A PP2Cs (ABI1, ABI2, HAB1, HAB2, AHG1, AHG3) by interacting with and releasing the N-terminal autoinhibition of these proteins. EAR1 indirectly affects OST1 activity through enhancing ABI1 activity. The EAR1 141-287 fragment is sufficient for the functioning of EAR1 in ABA responses; the 131-248 region harbors an intrinsically disordered region and only 249-278 can form a predicted regular structure. EAR1 is located in the ER, nuclei, and cytoplasm; ABA signaling promotes the translocation of EAR1 from the ER and/or cytoplasm to the nucleus. Mutations showed that it functions in seed germination, primary root growth, and drought tolerance.","ENHANCER OF ABA CO-RECEPTOR 1 (EAR1)","ENHANCER OF ABA CO-RECEPTOR 1 (EAR1);EXCISION ULTRADIAN RHYTHM 1 (EUR1)"]
["AT5G17170","black","rubredoxin family protein;(source:Araport11)","ENHANCER OF SOS3-1 (ENH1)","ENHANCER OF SOS3-1 (ENH1)"]
["AT1G74030","black","Encodes the plastid-localized phosphoenolpyruvate enolase. Mutant plants have abnormal trichomes, defects in fatty acid metabolism.","ENOLASE 1 (ENO1)","ENOLASE 1 (ENO1)"]
["AT2G34840","black","Member of the Coat Protein I (COPI) complex is a seven-subunit coatomer complex consisting of the &#945;, &#946;, &#946;&#8242;, &#947;, &#948;, &#949;, and &#950; proteins. COPI is required for retrograde transport from the Golgi to the endoplasmic reticulum, Golgi maintenance, and cell plate formation.","EPSILON2 COAT PROTEIN (epsilon2-COP)","EPSILON2 COAT PROTEIN (epsilon2-COP)"]
["AT1G70330","black","encodes an adenosine transporter that catalyze a proton-dependent adenosine transport. The mRNA is cell-to-cell mobile.","EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 1 (ENT1)","EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 1 (ENT1,AT);EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 1 (ENT1)"]
["AT5G62230","black","Encodes a receptor-like kinase that, together with ER and ERL2 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. Along with erl2 functionally compensates for loss of erecta during integument development. Its transcript levels change after inducing MUTE expression in a mute background.","ERECTA-LIKE 1 (ERL1)","ERECTA-LIKE 1 (ERL1)"]
["AT5G07180","black","Encodes a receptor-like kinase that, together with ER and ERL1 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is also important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. When heterozygous in an er/erl1 null background, plants are female sterile due to cell division defect in the integuments.","ERECTA-LIKE 2 (ERL2)","ERECTA-LIKE 2 (ERL2)"]
["AT5G44210","black","encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.","ERF DOMAIN PROTEIN 9 (ERF9)","ERF DOMAIN PROTEIN 9 (ERF9);ERF DOMAIN PROTEIN- 9 (ATERF-9);ERF DOMAIN PROTEIN 9 (ATERF9)"]
["AT4G00900","black","Type IIA (SERCA-type) Ca2+ ATPase, catalyzes the efflux of calcium from the cytoplasm.","ER-TYPE CA2+-ATPASE 2 (ECA2)","ER-TYPE CA2+-ATPASE 2 (ECA2);ARABIDOPSIS THALIANA ER-TYPE CA2+-ATPASE 2 (ATECA2)"]
["AT5G43060","black","Peptidase, activity detected in extracts of root, leaf and cell culture.","ESPONSIVE TO DEHYDRATION 21B (RD21B)","ESPONSIVE TO DEHYDRATION 21B (RD21B)"]
["AT3G48430","black","Relative of Early Flowering 6 (REF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a positive regulator of flowering in an FLC-dependent pathway. REF6 mutants have hyperacetylation of histone H4 at the FLC locus. REF6 interacts with BES1 in a Y2H assay and in vitro. REF6 may play a role in brassinoteroid signaling by affecting histone methylation in the promoters of BR-responsive genes. It is most closely related to the JHDM3 subfamily of JmjN/C proteins. The mRNA is cell-to-cell mobile.","RELATIVE OF EARLY FLOWERING 6 (REF6)","ETHYLENE INSENSITIVE 6 (EIN6);RELATIVE OF EARLY FLOWERING 6 (REF6);JUMONJI DOMAIN-CONTAINING PROTEIN 12 (JMJ12); (EIN6)"]
["AT1G53170","black","encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-8). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.","ETHYLENE RESPONSE FACTOR 8 (ERF8)","ETHYLENE RESPONSE ELEMENT BINDING FACTOR 4 (ATERF8);ETHYLENE RESPONSE FACTOR 8 (ERF8); (ATERF-8)"]
["AT3G15210","black","Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-4). The protein contains one AP2 domain. Acts as a negative regulator of JA-responsive defense gene expression and resistance to the necrotrophic fungal pathogen Fusarium oxysporum and antagonizes JA inhibition of root elongation. The mRNA is cell-to-cell mobile.","ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4 (ERF4)","ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4 (ATERF-4);ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4 (ERF4);RELATED TO AP2 5 (RAP2.5);ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4 (ATERF4)"]
["AT3G13060","black","Cytoplasmic YT521-B homology domain (YTH)-containing m6A-binding protein; restores alfalfa mosaic virus infectivity in partially resistant alkbh9b mutants.","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 5 (ECT5)","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 5 (ECT5)"]
["AT5G07280","black","Encodes EMS1 (EXCESS MICROSPOROCYTES1), a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in Arabidopsis anther.","EXCESS MICROSPOROCYTES1 (EMS1)","EXCESS MICROSPOROCYTES1 (EMS1);EXTRA SPOROGENOUS CELLS (EXS)"]
["AT1G10180","black","LOW protein: exocyst complex component-like protein;(source:Araport11)","EXOCYST COMPLEX COMPONENT 84C (EXO84C)","EXOCYST COMPLEX COMPONENT 84C (EXO84C)"]
["AT3G56640","black","Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.","EXOCYST COMPLEX COMPONENT SEC15A (SEC15A)","EXOCYST COMPLEX COMPONENT SEC15A (SEC15A)"]
["AT5G60370","black","Similar to exonuclease yeast exonuclease Exo5p. Mutants show a variety of subtle morphological alterations that are distinct from as we as exacerbated in combination with EXOVL.","EXONUCLEASE V-LIKE (EXOVL)","EXONUCLEASE V-LIKE (EXOVL)"]
["AT5G51550","black","EXORDIUM like 3;(source:Araport11)","EXORDIUM LIKE 3 (EXL3)","EXORDIUM LIKE 3 (EXL3)"]
["AT1G69530","black","Member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","EXPANSIN A1 (EXPA1)","EXPANSIN A1 (ATEXPA1);EXPANSIN 1 (EXP1); (AT-EXP1); (ATEXP1); (ATHEXP ALPHA 1.2);EXPANSIN A1 (EXPA1)"]
["AT2G43150","black","Proline-rich extensin-like family protein;(source:Araport11)","EXTENSIN 21 (EXT21)","EXTENSIN 21 (EXT21)"]
["AT3G52940","black","Encodes a sterol C-14 reductase required for cell division and expansion and is involved in proper organization of the embryo.","FACKEL (FK)","EXTRA-LONG-LIFESPAN 1 (ELL1); (HYD2);FACKEL (FK)"]
["AT2G35320","black","homologue of the animal Eyes Absent genes. encodes a tyrosine-specific phosphatase. the protein sequence lacks the cys-containing signature of the classical tyrosine phosphatases. belongs to the aspartate-based phosphatases. The enzyme activity is strictly metal-dependent.","EYES ABSENT HOMOLOG (EYA)","EYES ABSENT HOMOLOG (ATEYA);EYES ABSENT HOMOLOG (EYA)"]
["AT5G57800","black","encodes a transmembrane protein with similarity to the sterol desaturase family at the N-terminus and to the short-chain dehydrogenase/reductase family at the C-terminus. Mutant analyses indicate this protein is involved in cuticle membrane and wax biosynthesis. The mRNA is cell-to-cell mobile.","ECERIFERUM 3 (CER3)","FACELESS POLLEN 1 (FLP1); (WAX2);ECERIFERUM 3 (CER3); (YRE)"]
["AT1G15910","black","Belongs to a subgroup of SGS3-like proteins that act redundantly in RNA-directed DNA methylation: AT1G15910 (FDM1), AT4G00380 (FDM2), AT3G12550 (FDM3), AT1G13790 (FDM4), AT1G80790 (FDM5).","FACTOR OF DNA METHYLATION 1 (FDM1)","FACTOR OF DNA METHYLATION 1 (FDM1);INVOLVED IN DE NOVO 2 (IDN2) - LIKE 1 (IDNL1);IDN2 PARALOG 1 (IDP1)"]
["AT4G00380","black","Belongs to a subgroup of SGS3-like proteins that act redundantly in RNA-directed DNA methylation: AT1G15910 (FDM1), AT4G00380 (FDM2), AT3G12550 (FDM3), AT1G13790 (FDM4), AT1G80790 (FDM5).","FACTOR OF DNA METHYLATION 2 (FDM2)","FACTOR OF DNA METHYLATION 2 (FDM2);INVOLVED IN DE NOVO 2 (IDN2) - LIKE 2 (INDL2);IDN2 PARALOG 2 (IDP2)"]
["AT3G12550","black","Belongs to a subgroup of SGS3-like proteins that act redundantly in RNA-directed DNA methylation: AT1G15910 (FDM1), AT4G00380 (FDM2), AT3G12550 (FDM3), AT1G13790 (FDM4), AT1G80790 (FDM5).","FACTOR OF DNA METHYLATION 3 (FDM3)","FACTOR OF DNA METHYLATION 3 (FDM3)"]
["AT5G28530","black","FAR1-related sequence 10;(source:Araport11)","FAR1-RELATED SEQUENCE 10 (FRS10)","FAR1-RELATED SEQUENCE 10 (FRS10)"]
["AT2G43280","black","Encodes one of four FRS (FAR1-RELATED SEQUENCE) factor-like genes in Arabidopsis. FRS factors are characterized by having an N-terminal C2H2-type chelating motif of the WRKY- Glial Cell Missing1 family, a central core transposase domain of Mutator-like element transposases, and a C-terminal SWIM domain. The four FRF-like genes in Arabidopsis share only the N-terminal motif with FRS proteins.","FAR1-RELATED SEQUENCES-RELATED FACTOR4 (FRF4)","FAR1-RELATED SEQUENCES-RELATED FACTOR4 (FRF4)"]
["AT4G33360","black","Encodes an NAD+-dependent dehydrogenase that oxidizes farnesol more efficiently than other prenyl alcohol substrates.","FARNESOL DEHYDROGENASE (FLDH)","FARNESOL DEHYDROGENASE (FLDH)"]
["AT5G55730","black","Encodes fasciclin-like arabinogalactan-protein 1 (Fla1). fla1 mutants show defects in shoot regeneration. Possibly involved in embryogenesis and seed development.","FASCICLIN-LIKE ARABINOGALACTAN 1 (FLA1)","FASCICLIN-LIKE ARABINOGALACTAN 1 (FLA1)"]
["AT2G35860","black","Fasciclin-like arabinogalactan protein. Possibly involved in embryogenesis and seed development.","FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR (FLA16)","FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 PRECURSOR (FLA16)"]
["AT3G11700","black","Fasciclin-like arabinogalactan protein. Possibly involved in embryogenesis and seed development.","FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 18 PRECURSOR (FLA18)","FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 18 PRECURSOR (FLA18)"]
["AT3G60900","black","Fasciclin-like arabinogalactan protein. Possibly involved in embryogenesis and seed development.","FASCICLIN-LIKE ARABINOGALACTAN-PROTEIN 10 (FLA10)","FASCICLIN-LIKE ARABINOGALACTAN-PROTEIN 10 (FLA10)"]
["AT2G04780","black","fasciclin-like arabinogalactan-protein 7 (Fla7). Possibly involved in embryogenesis and seed development.","FASCICLIN-LIKE ARABINOOGALACTAN 7 (FLA7)","FASCICLIN-LIKE ARABINOOGALACTAN 7 (FLA7)"]
["AT3G25110","black","Encodes a FatA acyl-ACP thioesterase","FATA ACYL-ACP THIOESTERASE (FaTA)","FATA ACYL-ACP THIOESTERASE (AtFaTA);FATA ACYL-ACP THIOESTERASE (FaTA);FATA ACYL-ACP THIOESTERASE 1 (FATA1)"]
["AT5G64440","black","AtFAAH (fatty acid amide hydrolase) modulates endogenous NAEs (N-Acylethanolamines) levels in plants by hydrolyzing NAEs to ethanolamine and their corresponding free fatty acids. NAE depletion likely participates in the regulation of plant growth. The mRNA is cell-to-cell mobile.","FATTY ACID AMIDE HYDROLASE (FAAH)","FATTY ACID AMIDE HYDROLASE (FAAH);FATTY ACID AMIDE HYDROLASE (AtFAAH)"]
["AT2G29980","black","Endoplasmic reticulum enzyme responsible for the synthesis of 18:3 fatty acids from phospholipids. Uses cytochrome b5 as electron donor.","FATTY ACID DESATURASE 3 (FAD3)","FATTY ACID DESATURASE 3 (FAD3); (AtFAD3)"]
["AT4G27030","black","Encodes an unusual palmitate desaturase that is highly substrate specific. It introduces a delta-3 trans double bond at palmitate at the sn-2 position of phosphatidylglycerol. The mRNA is cell-to-cell mobile.","FATTY ACID DESATURASE A (FADA)","FATTY ACID DESATURASE 4 (FAD4);FATTY ACID DESATURASE A (FADA); (FAD4)"]
["AT3G20510","black","Encodes a member of the Tmemb_14 family that is predicted to be localized to the membranes of the secretory pathway. The mRNA is cell-to-cell mobile.","FATTY ACID EXPORT 6 (FAX6)","FATTY ACID EXPORT 6 (FAX6)"]
["AT1G08510","black","Encodes an acyl-acyl carrier protein thioesterase. Hydrolyzes primarily saturated acyl-ACPs with chain lengths that vary between 8 and 18 carbons. Involved in saturated fatty acid synthesis. Nuclear-encoded, plastid-targeted globular protein that is functional as dimer.","FATTY ACYL-ACP THIOESTERASES B (FATB)","FATTY ACYL-ACP THIOESTERASES B (FATB)"]
["AT1G78020","black","FCS like zinc finger 6 is induced during energy starvation through SnRK1 signaling. Mutants accumulate more SnRK1alpha1 which results in the inhibition of seedling growth under favorable growth conditions. Increased SnRK1 activity in the mutant also results in the downregulation of TOR signaling (DOI:10.1111/tpj.13854).","FCS LIKE ZINC FINGER 6 (FLZ6)","FCS LIKE ZINC FINGER 6 (FLZ6)"]
["AT4G25100","black","Fe-superoxide dismutase","FE SUPEROXIDE DISMUTASE 1 (FSD1)","FE SUPEROXIDE DISMUTASE 1 (FSD1)"]
["AT1G31420","black","Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots.","FEI 1 (FEI1)","FEI 1 (FEI1)"]
["AT2G35620","black","Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots.Mucilage is easily detached from fei2 mutants seeds, and forms a capsule that is >50% smaller relative to wild-type.","FEI 2 (FEI2)","FEI 2 (FEI2)"]
["AT3G51550","black","Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. Also involved in powdery mildew infection. Mutants show faster root elongation under dim light, the protein is required for intracellular accumulation of AHA2 under dim-light growth conditions. Positively regulates flowering by modulating the transcript accumulation and mRNA alternative splicing of certain flowering-related genes, including FLOWERING LOCUS C (FLC) and its homolog MADS AFFECTING FLOWERING (MAF). However, the RALF1 ligand negatively regulates flowering compared with FER.","FERONIA (FER)","FERONIA (FER)"]
["AT5G23440","black","ferredoxin/thioredoxin reductase subunit A (variable subunit) 1;(source:Araport11)","FERREDOXIN/THIOREDOXIN REDUCTASE SUBUNIT A (VARIABLE SUBUNIT) 1 (FTRA1)","FERREDOXIN/THIOREDOXIN REDUCTASE SUBUNIT A (VARIABLE SUBUNIT) 1 (FTRA1)"]
["AT5G49730","black","Encodes a plasma membrane-located ferric chelate reductase. Its mRNA is expressed in green aerial tissues (shoot, flower and cotyledon) in a light- and cell differentiation-specific manner.","FERRIC REDUCTION OXIDASE 6 (FRO6)","FERRIC REDUCTION OXIDASE 6 (FRO6); (FRO6);FERRIC REDUCTION OXIDASE 6 (ATFRO6)"]
["AT3G20740","black","Encodes a protein similar to the transcriptional regular of the animal Polycomb group and is involved in regulation of establishment of anterior-posterior polar axis in the endosperm and repression of flowering during vegetative phase. Mutation leads endosperm to develop in the absence of fertilization and flowers to form in seedlings and non-reproductive organs. Also exhibits maternal effect gametophytic lethal phenotype, which is suppressed by hypomethylation. Forms part of a large protein complex that can include VRN2 (VERNALIZATION 2), VIN3 (VERNALIZATION INSENSITIVE 3) and polycomb group proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE), CURLY LEAF (CLF) and SWINGER (SWN or EZA1). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization. In the ovule, the FIE transcript levels increase transiently just after fertilization.","FERTILIZATION-INDEPENDENT ENDOSPERM (FIE)","FERTILIZATION-INDEPENDENT ENDOSPERM (FIE); (FIS3);FERTILIZATION-INDEPENDENT ENDOSPERM 1 (FIE1)"]
["AT3G23400","black","Encodes FIBRILLIN 4 (FIB4). The fibrillins are a large family of chloroplast proteins that have been linked with stress tolerance and disease resistance. FIBRILLIN 4 is required for plastoglobule development and stress resistance.Iinvolved in plastoquinone transport.","FIBRILLIN 4 (FIB4)","FIBRILLIN 4 (FIB4);FIBRILLIN4 (FBN4)"]
["AT3G26070","black","PAP/fibrillin (ECM1 localized to chloroplasts, involved in response to H2O2.","FIBRILLIN3A (FBN3A)","FIBRILLIN3A (FBN3A)"]
["AT4G22910","black","Encodes an activator of an E3 ubiquitin ligase, anaphase-promoting complex/cyclosome (APC/C) that promotes entry into the endocycle.","FIZZY-RELATED 2 (FZR2)","FIZZY-RELATED 2 (FZR2);CELL CYCLE SWITCH PROTEIN 52 A1 (CCS52A1)"]
["AT3G25220","black","immunophilin (FKBP15-1)","FK506-BINDING PROTEIN 15 KD-1 (FKBP15-1)","FK506-BINDING PROTEIN 15 KD-1 (FKBP15-1)"]
["AT5G08640","black","Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols. Co-expressed with CHI and CHS (qRT-PCR).","FLAVONOL SYNTHASE 1 (FLS1)","FLAVONOL SYNTHASE (FLS); (ATFLS1);FLAVONOL SYNTHASE 1 (FLS1)"]
["AT3G12145","black","A novel leucine-rich repeat protein. Interacts directly with MADS domain transcription factor.","FLOR1 (FLR1)","FLOR1 (FLR1); (FLOR1);FLORAL TRANSITION AT THE MERISTEM4 (FTM4)"]
["AT5G27830","black","Folate receptor family protein;(source:Araport11).Expression correlates with increase in bound folate in planta.","FOLATE BINDING PROTEIN (FBP)","FOLATE BINDING PROTEIN (FBP)"]
["AT4G14740","black","FORKED-LIKE family member, part of Group 1 (FKD1, FL1-FL3; Group 2 consists of FL4 and FL8 and Group 3 consists of FL5- FL7). May coordinate leaf size with vein density, where Group 1 members and Group 3 members have opposing functions.","FORKED-LIKE3 (FL3)","FORKED-LIKE3 (FL3)"]
["AT1G24150","black","Encodes a group I formin. Localized to cell junctions. Polymerizes actin. Binds profilin. Member of family of cytoskeletal-interacting proteins which have the ability to stimulate actin nucleation and barbed-end capping through the combined activity of conserved formin-homology 1 (FH1) and formin-homology 2 (FH2) domains. FORMIN4 is a spatial feedback element in a multi-layered, temporally defined sequence of cytoskeletal response, contributing to the distribution of actin filaments at the dynamic cell wall appositions boundary and to the outcomes of pre-invasion defense.","FORMIN HOMOLOGUE 4 (FH4)","FORMIN HOMOLOGUE 4 (ATFH4);FORMIN HOMOLOGUE 4 (FH4)"]
["AT5G47820","black","Encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers.","FRAGILE FIBER 1 (FRA1)","FRAGILE FIBER 1 (FRA1)"]
["AT5G58240","black","Encodes a Fhit protein. Has nucleoside phosphoramidase and adenylylsulfatase activities.","FRAGILE HISTIDINE TRIAD (FHIT)","FRAGILE HISTIDINE TRIAD (FHIT)"]
["AT1G66430","black","Encodes one of the several Arabidopsis fructokinases. Nomenclature according to Riggs 2017 has been adopted for the family by the community (personal communication, Boernke, Callis, Granot, Boernke, and Smeekens). Important for seed oil accumulation and vascular development.","FRUCTOKINASE 3 (FRK3)","FRUCTOKINASE 6 (FRK6);FRUCTOKINASE 3 (FRK3)"]
["AT3G19280","black","Encodes a protein with core &#945;1,3-fucosyltransferase activity.","FUCOSYLTRANSFERASE 11 (FUT11)","FUCOSYLTRANSFERASE 11 (FUT11); (ATFUT11); (FUCT1); (FUCTA)"]
["AT1G12050","black","Encodes a fumarylacetoacetase that converts fumarylacetoacetate to acetoacetate and fumarate and is likely to be involved in tyrosine catabolism.","FUMARYLACETOACETATE HYDROLASE (FAH)","FUMARYLACETOACETATE HYDROLASE (FAH); (ATFAH);SHORT-DAY SENSITIVE CELL DEATHSHORT-DAY SENSITIVE CELL DEATHSHORT-DAY SENSITIVE CELL DEATH 111 (SSCD1)"]
["AT1G26810","black","Encodes a protein with &#946;1,3-galactosyltransferase activity involved in the biosynthesis of the Lewis a epitope of certain glycoproteins.","GALACTOSYLTRANSFERASE1 (GALT1)","GALACTOSYLTRANSFERASE1 (GALT1)"]
["AT3G61130","black","Encodes a protein with putative galacturonosyltransferase activity. The mRNA is cell-to-cell mobile.","GALACTURONOSYLTRANSFERASE 1 (GAUT1)","GALACTURONOSYLTRANSFERASE 1 (GAUT1); (LGT1)"]
["AT5G47780","black","Encodes a protein with putative galacturonosyltransferase activity. The mRNA is cell-to-cell mobile.","GALACTURONOSYLTRANSFERASE 4 (GAUT4)","GALACTURONOSYLTRANSFERASE 4 (GAUT4)"]
["AT2G30575","black","Encodes a protein with putative galacturonosyltransferase activity. Required for synthesis of native homogalacturonan in growing pollen tubes; critical role in pollen tube growh and male fertility.","LOS GLYCOSYLTRANSFERASE 5 (LGT5)","GALACTURONOSYLTRANSFERASE 5 (GAUT5);LOS GLYCOSYLTRANSFERASE 5 (LGT5)"]
["AT1G06780","black","Encodes a protein with putative galacturonosyltransferase activity. Required for synthesis of native homogalacturonan in growing pollen tubes; critical role in pollen tube growh and male fertility.","GALACTURONOSYLTRANSFERASE 6 (GAUT6)","GALACTURONOSYLTRANSFERASE 6 (GAUT6)"]
["AT1G02720","black","Encodes a protein with putative galacturonosyltransferase activity.","GALACTURONOSYLTRANSFERASE-LIKE 5 (GATL5)","GALACTURONOSYLTRANSFERASE-LIKE 5 (GATL5); (ATGATL5)"]
["AT1G70090","black","Encodes a protein with putative galacturonosyltransferase activity.","GLUCOSYL TRANSFERASE FAMILY 8 (LGT8)","GALACTURONOSYLTRANSFERASE-LIKE 9 (GATL9);GLUCOSYL TRANSFERASE FAMILY 8 (LGT8)"]
["AT1G78680","black","The Arabidopsis protein AtGGH2 is a gamma-glutamyl hydrolase acting specifically on monoglutamates. The enzyme is involved in the tetrahydrofolate metabolism and located to the vacuole.","GAMMA-GLUTAMYL HYDROLASE 2 (GGH2)","GAMMA-GLUTAMYL HYDROLASE 2 (GGH2);GAMMA-GLUTAMYL HYDROLASE 2 (ATGGH2)"]
["AT4G30530","black","Encodes a gamma-glutamyl peptidase, outside the GGT family, that can hydrolyze gamma-glutamyl peptide bonds. The mRNA is cell-to-cell mobile.","GAMMA-GLUTAMYL PEPTIDASE 1 (GGP1)","GAMMA-GLUTAMYL PEPTIDASE 1 (GGP1)"]
["AT4G30550","black","Class I glutamine amidotransferase-like superfamily protein;(source:Araport11)","GAMMA-GLUTAMYL PEPTIDASE 3 (GGP3)","GAMMA-GLUTAMYL PEPTIDASE 3 (GGP3)"]
["AT4G39640","black","The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in vascular tissues (predominantly phloem) of leaves and is involved in the degradation of glutathione. The encoded enzyme also mitigates oxidative stress by metabolizing GSSG (oxidized form of GSH - glutathione) in the apoplast.","GAMMA-GLUTAMYL TRANSPEPTIDASE 1 (GGT1)","GAMMA-GLUTAMYL TRANSPEPTIDASE 1 (GGT1)"]
["AT5G05620","black","Paralog of TUBG1, required for centrosomal and noncentrosomal microtubule nucleation. Involved in specification of cell identity, such as stomatal patterning. Constitutively expressed throughout plant. Enriched at the post-cytokinetic cell edges in leaves and roots.","GAMMA-TUBULIN COMPLEX PROTEIN 2 (GCP2)","GAMMA-TUBULIN 2 (TUBG2);GAMMA-TUBULIN COMPLEX PROTEIN 2 (GCP2);ARABIDOPSIS THALIANA GAMMA-TUBULIN COMPLEX PROTEIN 2 (ATGCP2)"]
["AT5G44700","black","Encodes GASSHO2 (GSO2), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO2 and a homolog GSO1 (At4g20140) are required for the formation of a normal epidermal surface during embryogenesis.","GASSHO 2 (GSO2)","GASSHO 2 (GSO2);EMBRYO SAC DEVELOPMENT ARREST 23 (EDA23)"]
["AT4G20140","black","Encodes GASSHO1 (GSO1), a putative leucine-rich repeat transmembrane-type receptor kinase. GSO1 and a homolog GSO2 (At5g44700) are required for the formation of a normal epidermal surface during embryogenesis. Necessary for localizing CASPARIAN STRIP DOMAIN PROTEINS (CASPs) - major players of endodermal differentiation - into an uninterrupted, ring-like domain.","GASSHO1 (GSO1)","GASSHO1 (GSO1);SCHENGEN 3 (SGN3)"]
["AT1G75750","black","GA-responsive GAST1 protein homolog regulated by BR and GA antagonistically. Possibly involved in cell elongation based on expression data The mRNA is cell-to-cell mobile.","GAST1 PROTEIN HOMOLOG 1 (GASA1)","GAST1 PROTEIN HOMOLOG 1 (GASA1)"]
["AT1G74670","black","Cell wall localized protein that functions downstream of RGL2 integrating GA, ABA, and Glc signaling. Involved in seed germination and cell expansion.","GA-STIMULATED ARABIDOPSIS 6 (GASA6)","GA-STIMULATED ARABIDOPSIS 6 (GASA6)"]
["AT1G08010","black","Encodes a member of the GATA factor family of zinc finger transcription factors.","GATA TRANSCRIPTION FACTOR 11 (GATA11)","GATA TRANSCRIPTION FACTOR 11 (GATA11)"]
["AT5G47140","black","Encodes a member of the GATA factor family of zinc finger transcription factors.","GATA TRANSCRIPTION FACTOR 27 (GATA27)","GATA TRANSCRIPTION FACTOR 27 (GATA27)"]
["AT1G78300","black","G-box binding factor GF14 omega encoding a 14-3-3 protein The mRNA is cell-to-cell mobile.","GENERAL REGULATORY FACTOR 2 (GRF2)","GENERAL REGULATORY FACTOR 2 (GRF2);14-3-3 PROTEIN G-BOX FACTOR14 OMEGA (14-3-3OMEGA); (GF14 OMEGA)"]
["AT2G42590","black","14-3-3 gene. Binds calcium and displays induced structural changes.","GENERAL REGULATORY FACTOR 9 (GRF9)","GENERAL REGULATORY FACTOR 9 (GRF9); (GF14 MU); (GRF14)"]
["AT4G38460","black","Encodes a type II small subunit of the heteromeric geranyl(geranyl) diphosphate synthase that is localized to the chloroplast, expressed in petals and sepals and is involved in monoterpene biosynthesis. The mRNA is cell-to-cell mobile.","GERANYLGERANYL REDUCTASE (GGR)","GERANYLGERANYL REDUCTASE (GGR);SMALL SUBUNIT OF HETERODIMERIC GERANYL(GERANYL)DIPHOSPHATE SYNTHASE (SSU); (ATSSU);GERANYL(GERANYL)DIPHOSPHATE SYNTHASE 12 (GGPPS12)"]
["AT1G35160","black","GF14 protein phi chain member of 14-3-3 protein family. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1 The mRNA is cell-to-cell mobile.","GF14 PROTEIN PHI CHAIN (GF14 PHI)","GF14 PROTEIN PHI CHAIN (GF14 PHI)"]
["AT5G51810","black","Encodes gibberellin 20-oxidase. Involved in gibberellin biosynthesis. Up-regulated by far red light in elongating petioles. Not regulated by a circadian clock. Mutation of GA20ox2 delays flowering.","GIBBERELLIN 20 OXIDASE 2 (GA20OX2)","GIBBERELLIN 20 OXIDASE 2 (GA20OX2); (ATGA20OX2); (AT2353)"]
["AT1G79840","black","Glabra 2, a homeodomain protein affects epidermal cell identity including trichomes, root hairs, and seed coat. It also down-regulates seed oil content. Expressed in atrichoblasts and required to suppress root hair development. Also expressed abundantly during early seed development. Directly regulated by WER.","GLABRA 2 (GL2)","GLABRA 2 (GL2)"]
["AT5G15050","black","Encodes GlcAT14B. Has glucuronosyltransferase activity adding glucuronic acid residues to beta-1,3- and beta-1,6-linked galactans.","GLCA TRANSFERASE 14B (GLCAT14B)","GLCA TRANSFERASE 14B (GLCAT14B)"]
["AT2G37585","black","Encodes GlcAT14C. Has glucuronosyltransferase activity adding glucuronic acid residues to beta-1,3- and beta-1,6-linked galactans.","GLCA TRANSFERASE 14C (GLCAT14C)","GLCA TRANSFERASE 14C (GLCAT14C)"]
["AT2G19880","black","Encodes Glucosylceramide synthase (GCS) which catalyzes the final step in glucosylceramide (GlcCer) synthesis by transferring a glucosyl residue from UDP-Glc to the ceramide backbone.","GLCCER SYNTHASE (GCS)","GLCCER SYNTHASE (GCS)"]
["AT4G04970","black","encodes a gene similar to callose synthase The mRNA is cell-to-cell mobile.","GLUCAN SYNTHASE-LIKE 1 (GSL1)","GLUCAN SYNTHASE LIKE 1 (atgsl01); (GSL01);GLUCAN SYNTHASE LIKE-1 (ATGSL1);GLUCAN SYNTHASE-LIKE 1 (GSL1)"]
["AT3G14570","black","encodes a protein similar to callose synthase","GLUCAN SYNTHASE-LIKE 4 (GSL04)","GLUCAN SYNTHASE-LIKE 4 (ATGSL04); (gsl04); (atgsl4);GLUCAN SYNTHASE-LIKE 4 (GSL04);GLUCAN SYNTHASE-LIKE 4 (GSL4);CALLOSE SYNTHASE 8 (CALS8)"]
["AT1G24280","black","Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.","GLUCOSE-6-PHOSPHATE DEHYDROGENASE 3 (G6PD3)","GLUCOSE-6-PHOSPHATE DEHYDROGENASE 3 (G6PD3)"]
["AT1G09420","black","Encodes a protein similar to glucose-6-phosphate dehydrogenase but, based on amino acid differences in the active site and lack of activity, does not encode a functional G6PDH. The amino acid sequence for the consensus sequence of the G6PDH active site (DHYLGKE) differs in three places in this protein. gc exon splice site at 20574 is based on protein alignment, and is not confirmed experimentally.","GLUCOSE-6-PHOSPHATE DEHYDROGENASE 4 (G6PD4)","GLUCOSE-6-PHOSPHATE DEHYDROGENASE 4 (G6PD4)"]
["AT2G25450","black","Encodes a 2-oxoacid-dependent dioxygenase involved in the production of 2-hydroxybut-3-enyl glucosinolate.","GLUCOSINOLATE HYDROXYLASE (GSL-OH)","GLUCOSINOLATE HYDROXYLASE (GSL-OH)"]
["AT5G62680","black","Encodes a high-affinity, proton-dependent glucosinolate-specific transporter that is crucial for the transport of both methionine- and tryptophan-derived glucosinolates to seeds.","NRT1/ PTR FAMILY 2.11 (NPF2.11)","GLUCOSINOLATE TRANSPORTER-2 (GTR2); (ATNPF2.11);NRT1/ PTR FAMILY 2.11 (NPF2.11)"]
["AT5G07440","black","Encodes the beta-subunit of the glutamate dehydrogenase. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.","GLUTAMATE DEHYDROGENASE 2 (GDH2)","GLUTAMATE DEHYDROGENASE 2 (GDH2)"]
["AT2G17260","black","Encodes a glutamate receptor. Involved in calcium-programmed stomatal closure.","GLUTAMATE RECEPTOR 2 (GLR2)","GLUTAMATE RECEPTOR 2 (GLR2); (ATGLR3.1); (GLR3.1); (ATGLR2)"]
["AT3G51480","black","member of Putative ligand-gated ion channel subunit family","GLUTAMATE RECEPTOR 3.6 (GLR3.6)","GLUTAMATE RECEPTOR 3.6 (ATGLR3.6); (GLR3.6);GLUTAMATE RECEPTOR 3.6 (GLR3.6)"]
["AT2G32400","black","Glr5","GLUTAMATE RECEPTOR 5 (GLR5)","GLUTAMATE RECEPTOR 5 (GLR5);GLUTAMATE RECEPTOR 3.7 (GLR3.7); (ATGLR3.7)"]
["AT1G66200","black","encodes a cytosolic glutamate synthetase, this enzyme has low affinity with substrate ammonium","GLUTAMINE SYNTHASE CLONE F11 (GSR2)","GLUTAMINE SYNTHETASE 1;2 (GLN1;2);GLUTAMINE SYNTHASE CLONE F11 (GSR2)"]
["AT2G31570","black","glutathione peroxidase GPx","GLUTATHIONE PEROXIDASE 2 (GPX2)","GLUTATHIONE PEROXIDASE 2 (ATGPX2);GLUTATHIONE PEROXIDASE 2 (GPX2); (GPXL2)"]
["AT1G10370","black","Encodes GSTU17 (Glutathione S-Transferase U17). Functions as a negative component of stress-mediated signal transduction pathways in drought and salt stress responses.","EARLY-RESPONSIVE TO DEHYDRATION 9 (ERD9)","GLUTATHIONE S-TRANSFERASE 30 (GST30);GLUTATHIONE S-TRANSFERASE TAU 17 (ATGSTU17);GLUTATHIONE S-TRANSFERASE 30B (GST30B);EARLY-RESPONSIVE TO DEHYDRATION 9 (ERD9);GLUTATHIONE S-TRANSFERASE U17 (GSTU17)"]
["AT5G27380","black","Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected; the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol. Increased glutathione accumulation in response to cesium stress.","GLUTATHIONE SYNTHETASE 2 (GSH2)","GLUTATHIONE SYNTHETASE 2 (GSH2); (ATGSH2); (GSHB)"]
["AT4G25840","black","glycerol-3-phosphatase 1;(source:Araport11)","GLYCEROL-3-PHOSPHATASE 1 (GPP1)","GLYCEROL-3-PHOSPHATASE 1 (GPP1); (PYRP3)"]
["AT5G40610","black","NAD-dependent glycerol-3-phosphate dehydrogenase family protein;(source:Araport11)","GLYCEROL-3-PHOSPHATE DEHYDROGENASE PLASTIDIC (GPDHP)","GLYCEROL-3-PHOSPHATE DEHYDROGENASE PLASTIDIC (GPDHP)"]
["AT2G13100","black","Encodes a member of the phosphate starvation-induced glycerol-3-phosphate permease gene family: AT3G47420(G3Pp1), AT4G25220(G3Pp2), AT1G30560(G3Pp3), AT4G17550(G3Pp4) and AT2G13100(G3Pp5). The mRNA is cell-to-cell mobile.","GLYCEROL-3-PHOSPHATE PERMEASE 5 (G3Pp5)","GLYCEROL-3-PHOSPHATE PERMEASE 5 (AtG3Pp5);GLYCEROL-3-PHOSPHATE PERMEASE 5 (G3Pp5)"]
["AT1G01610","black","bifunctional sn-glycerol-3-phosphate 2-O-acyltransferase/phosphatase. Involved in cutin assembly and is functionally redundant with GPAT8.","GLYCEROL-3-PHOSPHATE SN-2-ACYLTRANSFERASE 4 (GPAT4)","GLYCEROL-3-PHOSPHATE SN-2-ACYLTRANSFERASE 4 (ATGPAT4);GLYCEROL-3-PHOSPHATE SN-2-ACYLTRANSFERASE 4 (GPAT4)"]
["AT5G55480","black","Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. The mRNA is cell-to-cell mobile.","SHV3-LIKE 1 (SVL1)","GLYCEROPHOSPHODIESTERASE-LIKE 1 (GPDL1);SHV3-LIKE 1 (SVL1);GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE (GDPD) LIKE 4 (GDPDL4)"]
["AT5G45350","black","proline-rich family protein;(source:Araport11)","GLYCINE AND PROLINE RICH PROTEIN 2 (GPRP2)","GLYCINE AND PROLINE RICH PROTEIN 2 (GPRP2)"]
["AT5G17650","black","glycine/proline-rich protein;(source:Araport11)","GLYCINE AND PROLINE RICH PROTEIN 4 (GPRP4)","GLYCINE AND PROLINE RICH PROTEIN 4 (GPRP4)"]
["AT2G22660","black","Encodes a member of a family of DUF1399 domain containing proteins. GRDP1 is involved in germination and response to ABA. Loss of function mutants have reduced germination in the presence of osmotic stressors.","GLYCINE-RICH DOMAIN PROTEIN1 (ATGRDP1)","GLYCINE-RICH DOMAIN PROTEIN1 (ATGRDP1)"]
["AT1G64390","black","glycosyl hydrolase 9C2;(source:Araport11)","GLYCOSYL HYDROLASE 9C2 (GH9C2)","GLYCOSYL HYDROLASE 9C2 (AtGH9C2);GLYCOSYL HYDROLASE 9C2 (GH9C2)"]
["AT1G27950","black","Encodes LTPG1, a lipid transfer protein with a predicted GPI (glycosylphosphatidylinositol)-anchor domain. Localized in the plasma membrane. Disruption of the LTPG1 gene causes alterations of cuticular lipid composition, but no significant changes on total wax and cutin monomer loads are seen. The mRNA is cell-to-cell mobile.","GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 1 (LTPG1)","GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 1 (LTPG1)"]
["AT3G43720","black","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)","GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 2 (LTPG2)","GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 2 (LTPG2)"]
["AT3G22600","black","Glycosylphosphatidylinositol (GPI)-anchored LTPg protein, downregulated in syncytia induced by the beet cyst nematode Heterodera schachtii and root knot nematode Meloidogyne incognita. Infection with bacteria (Pseudomonas syringae) and fungi (Botrytis cinerea) leads to the induction of the gene in leaves.","GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 5 (LTPG5)","GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 5 (LTPG5)"]
["AT1G62790","black","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)","GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 7 (LTPG7)","GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 7 (LTPG7)"]
["AT1G53580","black","Mononuclear Fe(II)-containing member of the b-lactamase fold superfamily. ETHE1 is homodimeric in solution, exhibits low-level esterase activity, and specifically binds a single Fe(II) atom in the active site.","GLYOXALASE II 3 (GLY3)","GLYOXALASE 2-3 (GLX2-3);ETHE1-LIKE (ETHE1);GLYOXALASE II 3 (GLY3);ETHYLMALONIC ENCEPHALOPATHY PROTEIN1 (ETHE1)"]
["AT1G11840","black","Encodes Ni+ dependent glyoxalase I homolog ATGLX1.","GLYOXALASE I HOMOLOG (GLX1)","GLYOXALASE I HOMOLOG (GLX1);GLYOXALASEI 3 (ATGLYI3)"]
["AT5G57040","black","Vicinal oxygen chelate (VOC) superfamily member. Responds to NaCl,drought and high light stress.","GLYOXALASE I-LIKE;11 (GLXI-LIKE;11)","GLYOXALASE I-LIKE;11 (GLXI-LIKE;11)"]
["AT2G13650","black","Encodes a Golgi-localized GDP-mannose transporter. It can transport ADP-glucose in vitro.","GOLGI NUCLEOTIDE SUGAR TRANSPORTER 1 (GONST1)","GOLGI NUCLEOTIDE SUGAR TRANSPORTER 1 (GONST1)"]
["AT1G76340","black","Encodes a nucleotide-sugar transporter. It is is likely the primary Golgi GDP-L-galactose transporter, and provides GDP-L-galactose for RG-II biosynthesis. Knockout lines are lethal. RNAi suppressor lines were used for analysis. GDP-L-Galactose transport was affected. This process was required for pectic RG-II biosynthesis.","GOLGI NUCLEOTIDE SUGAR TRANSPORTER 3 (GONST3)","GOLGI NUCLEOTIDE SUGAR TRANSPORTER 3 (GONST3);GOLGI GDP-L-GALACTOSE TRANSPORTER1 (GGLT1)"]
["AT2G19950","black","This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC1 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (558-715 aa) portion of the protein.","GOLGIN CANDIDATE 1 (GC1)","GOLGIN CANDIDATE 1 (GC1)"]
["AT1G48270","black","encodes a protein similar to G-coupled receptor with 7 transmembrane regions. Overexpression studies suggest this gene is involved in dormancy and flowering. Reduction of expression results in decreased sensitivity to cytokinin.","G-PROTEIN-COUPLED RECEPTOR 1 (GCR1)","G-PROTEIN-COUPLED RECEPTOR 1 (GCR1); (ATGCR1)"]
["AT4G00850","black","Arabidopsis thaliana GRF1-interacting factor 3 (GIF3) mRNA. Identified as a subunit shared by BRM- and SYD-associated SWI/SNF complexes (PMID:36471048).","GRF1-INTERACTING FACTOR 3 (GIF3)","GRF1-INTERACTING FACTOR 3 (GIF3)"]
["AT4G04740","black","member of Calcium Dependent Protein Kinase","CALCIUM-DEPENDENT PROTEIN KINASE 23 (CPK23)","GROWTH CONTROLLED BY ABSCISSIC ACID 2 (GCA2);CALCIUM-DEPENDENT PROTEIN KINASE 23 (CPK23); (GCA2)"]
["AT1G28600","black","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates.","GUARD-CELL-ENRICHED GDSL LIPASE 2 (GGL2)","GUARD-CELL-ENRICHED GDSL LIPASE 2 (GGL2)"]
["AT5G45920","black","Guard-cell-enriched GDSL Lipase family member.","GUARD-CELL-ENRICHED GDSL LIPASE 28 (GGL28)","GUARD-CELL-ENRICHED GDSL LIPASE 28 (GGL28)"]
["AT5G63220","black","golgi-to-ER traffic-like protein;(source:Araport11)","GUIDED ENTRY OF TAIL-ANCHORED PROTEINS 4 (GET4)","GUIDED ENTRY OF TAIL-ANCHORED PROTEINS 4 (GET4);GUIDED ENTRY OF TAIL-ANCHORED PROTEINS 4 (ATGET4)"]
["AT4G16444","black","GET1 membrane receptor homolog . ER localized protein that Interacts with GET3a and GET2 orthologs. Disruption of both genes results in a decreased membrane localization of the SNARE proteinSYP123 and defects in root hair elongation.","GUIDED ENTRY OF TAIL-ANCHORED PROTEINS1 (GET1)","GUIDED ENTRY OF TAIL-ANCHORED PROTEINS1 (ATGET1);GUIDED ENTRY OF TAIL-ANCHORED PROTEINS1 (GET1)"]
["AT5G62670","black","H[+]-ATPase 11;(source:Araport11)","H(+)-ATPASE 11 (HA11)","H(+)-ATPASE 11 (HA11);H(+)-ATPASE 11 (AHA11)"]
["AT5G10460","black","Flowering time regulator; acts together with SRR1 in leaf initiation.","HAD-FAMILY REGULATOR OF DEVELOPMENT AND FLOWERING 1 (HDF1)","HAD-FAMILY REGULATOR OF DEVELOPMENT AND FLOWERING 1 (HDF1)"]
["AT3G60630","black","Belongs to one of the LOM (LOST MERISTEMS) genes: AT2G45160 (LOM1), AT3G60630 (LOM2) and AT4G00150 (LOM3). LOM1 and LOM2 promote cell differentiation at the periphery of shoot meristems and help to maintain their polar organization.","HAIRY MERISTEM 2 (HAM2)","HAIRY MERISTEM 2 (HAM2);ARABIDOPSIS THALIANA HAIRY MERISTEM 2 (ATHAM2);LOST MERISTEMS 2 (LOM2)"]
["AT5G56250","black","hapless 8;(source:Araport11)","HAPLESS 8 (HAP8)","HAPLESS 8 (HAP8)"]
["AT1G23000","black","Heavy metal transport/detoxification superfamily protein;(source:Araport11)","HEAVY METAL ASSOCIATED PROTEIN 5 (ATHMP05)","HEAVY METAL ASSOCIATED PROTEIN 5 (ATHMP05)"]
["AT4G37270","black","Encodes a P1B-type ATPases that is localized to the chloroplast envelope and is involved in the transport of Cu into chloroplasts. It is essential for growth under high light conditions.","HEAVY METAL ATPASE 1 (HMA1)","HEAVY METAL ATPASE 1 (HMA1);ARABIDOPSIS THALIANA HEAVY METAL ATPASE 1 (ATHMA1)"]
["AT2G19110","black","Encodes a protein with similarity to Zn ATPase. Can rescue Zn deficiency in yeast and Cd resistance, suggesting a role in Zn and Cd transport. The mRNA is cell-to-cell mobile.","HEAVY METAL ATPASE 4 (HMA4)","HEAVY METAL ATPASE 4 (HMA4);ARABIDOPSIS HEAVY METAL ATPASE 4 (ATHMA4)"]
["AT1G01490","black","Heavy metal transport/detoxification superfamily protein;(source:Araport11)","HEAVY METAL PROTEIN 1 (ATHMP01)","HEAVY METAL PROTEIN 1 (ATHMP01)"]
["AT4G32690","black","Encodes a hemoglobin (Hb) with a central domain similar to the 'truncated Hbs of bacteria, protozoa and fungi. The 3D structure of these types of Hbs is a 2-on-2 arrangement of alpha-helices as opposed to the 3-on-3 arrangement of the standard globin fold. This type of Hb is not found in animals or yeast.","HEMOGLOBIN 3 (GLB3)","HEMOGLOBIN 3 (GLB3);ARABIDOPSIS HEMOGLOBIN 3 (ATGLB3); (AHB3)"]
["AT4G38320","black","heptahelical transmembrane protein HHP5","HEPTAHELICAL PROTEIN 5 (HHP5)","HEPTAHELICAL PROTEIN 5 (HHP5)"]
["AT4G30850","black","heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors","HEPTAHELICAL TRANSMEMBRANE PROTEIN2 (HHP2)","HEPTAHELICAL TRANSMEMBRANE PROTEIN2 (HHP2)"]
["AT5G20270","black","heptahelical transmembrane protein homologous to human adiponectin receptors and progestin receptors","HEPTAHELICAL TRANSMEMBRANE PROTEIN1 (HHP1)","HEPTAHELICAL TRANSMEMBRANE PROTEIN1 (HHP1)"]
["AT1G30570","black","Encodes HERCULES2 (HERK2), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.","HERCULES RECEPTOR KINASE 2 (HERK2)","HERCULES RECEPTOR KINASE 2 (HERK2)"]
["AT5G62630","black","hipl2 protein precursor;(source:Araport11)","HIPL2 PROTEIN PRECURSOR (HIPL2)","HIPL2 PROTEIN PRECURSOR (HIPL2)"]
["AT4G16566","black","Encodes a protein that has an unexpected bifunctional capability in vitro. The purified enzyme has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) and ADP-sulfurylase activity (E.C. 2.7.7.5). The latter is activated at low pH. The enzyme can exert it phosphorylase activity on a range of related substrates in vitro, but it acts best with APS (adenosine 5'-phsophosulfate). This protein appears to function as a homodimer.","HISTIDINE TRIAD NUCLEOTIDE-BINDING 4 (HINT4)","HISTIDINE TRIAD NUCLEOTIDE-BINDING 4 (HINT4)"]
["AT2G30620","black","winged-helix DNA-binding transcription factor family protein;(source:Araport11)","HISTONE 1.2 (H1.2)","HISTONE 1.2 (H1.2); (HON2)"]
["AT3G45980","black","Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases as well as the UBC1 and UBC2 E2 ubiquitin conjugating enzymes. Lysine 146 appears to be the site of the ubiquitin addition.","(HTB9)","HISTONE 2B (H2B); (HTB9);HISTONE H2B (H2B)"]
["AT4G27230","black","Encodes HTA2, a histone H2A protein.","HISTONE H2A 2 (HTA2)","HISTONE H2A 2 (HTA2)"]
["AT4G32880","black","member of homeodomain-leucine zipper family, acting as a differentiation-promoting transcription factor of the vascular meristems.","HOMEOBOX GENE 8 (HB-8)","HOMEOBOX GENE 8 (ATHB-8); (ATHB8);HOMEOBOX GENE 8 (HB-8)"]
["AT5G39760","black","Functions together with TZP in co-regulation of the expression of blue-light dependent transcriptional regulators. Coassociates with and regulates the expression of light-regulated loci as well as transcriptional regulators to shape plant development in response to environmental stimuli with targets in RNA processing factors as well as proteins involved in salt stress and ABA signaling, in addition to embryo development. Acts downstream of TZP action with regard to blue-light-regulated hypocotyl elongation.","HOMEOBOX PROTEIN 23 (HB23)","HOMEOBOX PROTEIN 23 (AtHB23);ZINC FINGER HOMEODOMAIN 10 (ZHD10);HOMEOBOX PROTEIN 23 (HB23)"]
["AT3G50890","black","homeobox protein 28;(source:Araport11)","HOMEOBOX PROTEIN 28 (HB28)","HOMEOBOX PROTEIN 28 (AtHB28);HOMEOBOX PROTEIN 28 (HB28);ZINC FINGER HOMEODOMAIN 7 (ZHD7)"]
["AT2G44910","black","Encodes a homeodomain protein whose expression displays a dependence on phyB for both red and far-red light response. Also involved in the shade avoidance syndrome.","HOMEOBOX-LEUCINE ZIPPER PROTEIN 4 (HB4)","HOMEOBOX-LEUCINE ZIPPER PROTEIN 4 (ATHB4);ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 4 (ATHB-4);HOMEOBOX-LEUCINE ZIPPER PROTEIN 4 (HB4)"]
["AT1G05230","black","Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. Mutants have trichomes that appear glass-like under a dissecting microscope as compared to the wild-type trichomes. The mutations do not affect trichome growth or branch number.","HOMEODOMAIN GLABROUS 2 (HDG2)","HOMEODOMAIN GLABROUS 2 (HDG2)"]
["AT5G46880","black","homeobox-7;(source:Araport11)","HOMEOBOX-7 (HB-7)","HOMEODOMAIN GLABROUS 5 (HDG5);HOMEOBOX-7 (HB-7)"]
["AT2G18950","black","Encodes homogentisate phytyltransferase involved in tocopherol biosynthesis. Has impact on seed longevity and plays a role in the adaptation to low temperature stress, notably phloem loading.","HOMOGENTISATE PHYTYLTRANSFERASE 1 (HPT1)","HOMOGENTISATE PHYTYLTRANSFERASE 1 (HPT1); (TPT1);HOMOGENTISATE PHYTYLTRANSFERASE (ATHPT);VITAMIN E 2 (VTE2)"]
["AT5G48840","black","Encodes a pantothenate synthetase that appears to be located in the cytosol. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis. Analysis of the catalytic properties of this enzyme indicate that it might be able to synthesize adequate amounts of pantothenate even in the presence of low levels of pantoate.","HOMOLOG OF BACTERIAL PANC (PANC)","HOMOLOG OF BACTERIAL PANC (PANC);ARABIDOPSIS THALIANA PANTOTHENATE SYNTHETASE (ATPTS);PANTOTHENATE SYNTHETASE (PTS)"]
["AT5G03160","black","J domain protein localized in ER lumen. Can partially compensate for the growth defect in jem1 scj1 mutant yeast.","HOMOLOG OF MAMALLIAN P58IPK (P58IPK)","HOMOLOG OF MAMALLIAN P58IPK (P58IPK);HOMOLOG OF MAMALLIAN P58IPK (ATP58IPK)"]
["AT5G02410","black","Encodes ALG10, an ER-resident alpha1,2-glucosyltransferase that is required for lipid-linked oligosaccharide biosynthesis and subsequently for normal leaf development and abiotic stress response.","HOMOLOG OF YEAST ALG10 (ALG10)","HOMOLOG OF YEAST ALG10 (ALG10)"]
["AT3G56440","black","yeast autophagy 18 D-like protein;(source:Araport11)","HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) D (ATG18D)","HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) D (ATG18D);HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) D (ATATG18D)"]
["AT1G09020","black","Component of the regulatory subunit of SNF1-related protein kinase. As part of the regulatory complex it binds maltose which promotes kinase activity.","HOMOLOG OF YEAST SUCROSE NONFERMENTING 4 (SNF4)","HOMOLOG OF YEAST SUCROSE NONFERMENTING 4 (SNF4); (KINbeta-gamma); (ATSNF4)"]
["AT1G25550","black","Member of HHO/HRS GARP type transcriptional repressor family. Involved in Pi uptake and Pi starvation signaling. Transcriptional repressors that functions with other NIGT genes as an important hub in the nutrient signaling network associated with the acquisition and use of nitrogen and phosphorus.","HRS1 HOMOLOG3 (HHO3)","HRS1 HOMOLOG3 (HHO3);NITRATE-INDUCIBLE, GARP-TYPE TRANSCRIPTIONAL REPRESSOR 1/HYPERSENSITIVE TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1.1 (NIGT1.1)"]
["AT4G32010","black","Transcriptional repressor involved in the recruitment of PRC2 for genome-wide polycomb silencing.","HSI2-LIKE 1 (HSL1)","HSI2-LIKE 1 (HSL1); (HSI2-L1);VP1/ABI3-LIKE 2 (VAL2);VIVIPAROUS1/ABI3-LIKE2 (VAL2)"]
["AT1G19950","black","HVA22-like protein H (ATHVA22H);(source:Araport11)","HVA22-LIKE PROTEIN H (ATHVA22H) (HVA22H)","HVA22-LIKE PROTEIN H (ATHVA22H) (HVA22H)"]
["AT4G20930","black","Encodes a 3-hydroxyisobutyrate dehydrogenase.","HYDROXYISOBUTYRATE DEHYDROGENASE 1 (HDH1)","HYDROXYISOBUTYRATE DEHYDROGENASE 1 (HDH1)"]
["AT1G79870","black","Hydroxyphenylpyruvate reductase (HPPR), which catalyzes the reduction of 4-hydroxyphenylpyruvic acid (pHPP) to 4-hydroxyphenyllactic acid (pHPL). Together with HPPR3 and TAT1 involved in the biosynthesis of pHPL from tyrosine.","HYDROXYPHENYLPYRUVATE REDUCTASE 2 (HPPR2)","HYDROXYPHENYLPYRUVATE REDUCTASE 2 (HPPR2)"]
["AT5G25265","black","Hyp O-arabinosyltransferase-like protein;(source:Araport11)","HYDROXYPROLINE O-ARABINOSYLATRANSFERASE 1 (HPAT1)","HYDROXYPROLINE O-ARABINOSYLATRANSFERASE 1 (HPAT1)"]
["AT5G49230","black","Identified in a screen for mutations hypersensitive to red and blue light. Mutants have shorter hypocotyls. Encodes a nuclear localized protein with similarity to drought induced proteins. Contains a ZZ zinc finger domain which is thought to mediate protein-protein interactions.May be involved in red and blue light signal transduction.","HYPERSENSITIVE TO RED AND BLUE (HRB1)","HYPERSENSITIVE TO RED AND BLUE (HRB1);DROUGHT INDUCED LIKE9-7 (ATDIL9-7)"]
["AT5G39890","black","Plant Cysteine Oxidase (PCO). Involved in controlling the stability of Group VII ethylene response factors (ERF-VIIs) via N-Arg/degron pathway through catalyzing the oxidation of their N-Cys for subsequent Arginyl-tRNA--protein transferase 1 (ATE1) mediated arginine installation.","PLANT CYSTEINE OXIDASE 2 (PCO2)","HYPOXIA RESPONSE UNKNOWN PROTEIN 43 (HUP43);PLANT CYSTEINE OXIDASE 2 (PCO2)"]
["AT5G66985","black","hypothetical protein;(source:Araport11)","HYPOXIA RESPONSE UNKNOWN PROTEIN 44 (HUP44)","HYPOXIA RESPONSE UNKNOWN PROTEIN 44 (HUP44)"]
["AT3G27220","black","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)","HYPOXIA RESPONSE UNKNOWN PROTEIN 6 (HUP6)","HYPOXIA RESPONSE UNKNOWN PROTEIN 6 (HUP6)"]
["AT3G10040","black","Encodes HRA1 (HYPOXIA RESPONSE ATTENUATOR1), a low oxygen-inducible transcription factor.","HYPOXIA RESPONSE ATTENUATOR1 (HRA1)","HYPOXIA RESPONSE ATTENUATOR1 (HRA1)"]
["AT3G23170","black","PRP is a proline/serine rich protein of unknown function. It interacts with defense related MAP kinase MPK6 and others. It's expression is induced by PAMP elicitors. May play a role in response to pathogens. EIN3 and RAP2.2 are required to fully activate HRM1 expression under hypoxia.","PROLINE/SERINE-RICH PROTEIN (PRP)","HYPOXIA-RESPONSIVE MODULATOR 1 (HRM1);PROLINE/SERINE-RICH PROTEIN (PRP);HYPOXIA RESPONSE UNKNOWN PROTEIN 39 (HUP39)"]
["AT5G25890","black","encodes a protein that may be a negative regulator of lateral root formation in response to auxin. It is a member of IAA/ARF gene family and is plant-specific. Gain of function mutations in this gene suppresses lateral root formation and is resistant to inhibition of root elongation by auxin, cytokinin, and ethylene.","INDOLE-3-ACETIC ACID INDUCIBLE 28 (IAA28)","IAA-ALANINE RESISTANT 2 (IAR2);INDOLE-3-ACETIC ACID INDUCIBLE 28 (IAA28)"]
["AT5G56650","black","encodes a protein similar to IAA conjugate hydrolases. Enzyme assays with purified GST-tagged protein shows some activity in vitro but too low to be physiologically significant.","IAA-LEUCINE RESISTANT (ILR)-LIKE 1 (ILL1)","IAA-LEUCINE RESISTANT (ILR)-LIKE 1 (ILL1)"]
["AT5G56660","black","encodes IAA-amino acid hydrolase that has a broad range of substrate specificity. It is most active on IAA-Ala among the IAA-conjugate hydrolases tested.","IAA-LEUCINE RESISTANT (ILR)-LIKE 2 (ILL2)","IAA-LEUCINE RESISTANT (ILR)-LIKE 2 (ILL2)"]
["AT3G22425","black","Encodes imidazoleglycerolphosphate dehydratase.","IMIDAZOLEGLYCEROL-PHOSPHATE DEHYDRATASE (IGPD)","IMIDAZOLEGLYCEROL-PHOSPHATE DEHYDRATASE (IGPD)"]
["AT5G40830","black","Encodes an SAM&#8208;dependent methyltransferase superfamily protein that has an N&#8208;terminal transmembrane domain and a putative methyltransferase domain, DUF248, and is strongly expressed in the vasculature. Overexpression results in increased phloem and xylem in the plant.","INCREASED CAMBIAL ACTIVITY (ICA)","INCREASED CAMBIAL ACTIVITY (ICA)"]
["AT1G22950","black","Belongs to the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily proteins and contains an oxoglutarate/iron-dependent oxygenase domain (InterPro:IPR005123) of the prolyl 4-hydroxylase, alpha subunit subtype (P4Hc; InterPro:IPR006620), participates in epigenetic repression of flowering genes, works redundantly with CP2 to repress several members of the MADS-box transcription factors family, during vegetative development via histone modification.","INCURVATA11 (ICU11)","INCURVATA11 (ICU11)"]
["AT3G50700","black","zinc finger protein, similar to maize Indeterminate1 (ID1)","INDETERMINATE(ID)-DOMAIN 2 (IDD2)","INDETERMINATE(ID)-DOMAIN 2 (AtIDD2);INDETERMINATE(ID)-DOMAIN 2 (IDD2)"]
["AT3G23050","black","Transcription regulator acting as repressor of auxin-inducible gene expression. Plays role in the control of gravitropic growth and development in light-grown seedlings. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components. Pseudomonas syringae type III effector AvrRpt2 stimulates AXR2 protein turnover.","INDOLE-3-ACETIC ACID 7 (IAA7)","INDOLE-3-ACETIC ACID 7 (IAA7);AUXIN RESISTANT 2 (AXR2)"]
["AT2G22670","black","Encodes a transcriptional repressor of the auxin response that is auxin inducible and is involved in lateral root formation. The mRNA is cell-to-cell mobile.","INDOLEACETIC ACID-INDUCED PROTEIN 8 (IAA8)","INDOLEACETIC ACID-INDUCED PROTEIN 8 (IAA8)"]
["AT5G57910","black","ribosomal RNA small subunit methyltransferase G;(source:Araport11)","INO80-BINDING PROTEIN 2B (INB2B)","INO80-BINDING PROTEIN 2B (INB2B)"]
["AT1G34120","black","Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not act on I(1)P, I(1,4)P2, or phosphatidylinositol(4,5)P2.","INOSITOL POLYPHOSPHATE 5-PHOSPHATASE I (IP5PI)","INOSITOL POLYPHOSPHATE 5-PHOSPHATASE I (IP5PI); (AT5P1); (ATIP5PI);MYO-INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 1 (AT5PTASE1)"]
["AT5G24360","black","IRE1A and IRE1B catalyze bZIP60 mRNA splicing, producing the active bZIP60 transcription factor.","(IRE1B)","INOSITOL REQUIRING 1-1 (IRE1-1); (IRE1); (IRE1B); (AtIRE1b)"]
["AT4G18010","black","Encodes an inositol polyphosphate 5-phosphatase that appears to have Type I activity. It can dephosphorylate IP3(inositol(1,4,5)P3) and IP4 (inositol(1,3,4,5)P4), but it does not appear to be active against phosphatidylinositol 4,5 bisphosphate. Overexpression of this gene renders plants insensitive to ABA in germination and growth assays.","INOSITOL(1,4,5)P3 5-PHOSPHATASE II (IP5PII)","INOSITOL(1,4,5)P3 5-PHOSPHATASE II (IP5PII);MYO-INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 (AT5PTASE2);MYO-INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 (5PTASE2)"]
["AT5G42810","black","Encodes an inositol tetra-/pentaphosphate 2-kinase, involved in the biosynthesis of phytic acid, a regulator of intracellular signaling, a highly abundant animal antinutrient, and a phosphate and mineral storage compound in plant seeds. Is also required for growth and modulates phosphate homeostasis at the transcriptional level. Together with ITPK1 modulate crosstalks between SA-dependent immunity and phosphate-starvation responses.","INOSITOL-PENTAKISPHOSPHATE 2-KINASE 1 (IPK1)","INOSITOL-PENTAKISPHOSPHATE 2-KINASE 1 (ATIPK1); (ATIP5);INOSITOL-PENTAKISPHOSPHATE 2-KINASE 1 (IPK1)"]
["AT3G48670","black","Encodes IDN2 (INVOLVED IN DE NOVO 2), a double-stranded RNA-binding protein involved in de novo methylation and small interfering RNA (siRNA)-mediated maintenance methylation. IND2 is a component of the RNA-directed DNA methylation pathway.","INVOLVED IN DE NOVO 2 (IDN2)","INVOLVED IN DE NOVO 2 (IDN2);RNA-DIRECTED DNA METHYLATION 12 (RDM12)"]
["AT1G48280","black","hydroxyproline-rich glycoprotein family protein;(source:Araport11)","IPGA1-LIKE2 (IPGAL2)","IPGA1-LIKE2 (IPGAL2)"]
["AT5G03040","black","Member of IQ67 (CaM binding) domain containing family.","IQ-DOMAIN 2 (iqd2)","IQ-DOMAIN 2 (iqd2)"]
["AT3G49260","black","IQ67 DOMAIN protein 21; critical for indentation formation in pavement cell morphogenesis.","IQ-DOMAIN 21 (iqd21)","IQ-DOMAIN 21 (iqd21)"]
["AT1G14380","black","Encodes a microtubule-associated protein.Member of IQ67 (CaM binding) domain containing family.","IQ-DOMAIN 28 (IQD28)","IQ-DOMAIN 28 (IQD28)"]
["AT3G52290","black","Member of IQ67 (CaM binding) domain containing family.","IQ-DOMAIN 3 (IQD3)","IQ-DOMAIN 3 (IQD3)"]
["AT1G18840","black","Member of IQ67 (CaM binding) domain containing family.","IQ-DOMAIN 30 (IQD30)","IQ-DOMAIN 30 (IQD30)"]
["AT1G74690","black","Encodes a microtubule-associated protein.Member of IQ67 (CaM binding) domain containing family.","IQ-DOMAIN 31 (IQD31)","IQ-DOMAIN 31 (IQD31)"]
["AT1G19870","black","Encodes a microtubule-associated protein.Member of IQ67 (CaM binding) domain containing family.","IQ-DOMAIN 32 (iqd32)","IQ-DOMAIN 32 (iqd32)"]
["AT2G33990","black","Member of IQ67 (CaM binding) domain containing family.","IQ-DOMAIN 9 (iqd9)","IQ-DOMAIN 9 (iqd9)"]
["AT1G60960","black","Encodes a plasma membrane localized zinc/iron transporter.","IRON REGULATED TRANSPORTER 3 (IRT3)","IRON REGULATED TRANSPORTER 3 (IRT3);IRON REGULATED TRANSPORTER 3 (ATIRT3)"]
["AT1G26640","black","Encodes a cytosolic isopentenyl phosphate kinase that plays an important role in regulating the formation of both MVA (mevalonic acid) and MEP (methylerythritol phosphate) pathway-derived terpenoid compounds by controlling the ratio of IP/DMAP to IPP/DMAPP. IPP and DMAPP are the universal C5 building blocks of all natural terpenoids. IPK enhances terpenoid formation by returning IP/DMAP to the terpenoid biosynthetic network.","ISOPENTENYL PHOSPHATE KINASE (IPK)","ISOPENTENYL PHOSPHATE KINASE (IPK)"]
["AT1G26120","black","alpha/beta-Hydrolases superfamily protein;(source:Araport11)","ISOPRENYLCYSTEINE METHYLESTERASE-LIKE 1 (ICME-LIKE1)","ISOPRENYLCYSTEINE METHYLESTERASE-LIKE 1 (ICME-LIKE1)"]
["AT4G35730","black","Regulator of Vps4 activity in the MVB pathway protein;(source:Araport11)","IST1-LIKE 3 (ISTL3)","IST1-LIKE 3 (ISTL3)"]
["AT4G29440","black","Regulator of Vps4 activity in the MVB pathway protein;(source:Araport11)","IST1-LIKE 4 (ISTL4)","IST1-LIKE 4 (ISTL4)"]
["AT2G46370","black","Encodes a jasmonate-amido synthetase that is a member of the GH3 family of proteins. JAR1 catalyzes the formation of a biologically active jasmonyl-isoleucine (JA-Ile) conjugate. JA-Ile promotes the interaction between JAZ1 and COI1 in the jasmonate signaling pathway. JAR1 localizes to the cytoplasm and is also a phytochrome A signaling component. JAR1 is an auxin-induced gene. Loss of function mutants are defective in a variety of responses to jasmonic acid. JAR1 has additional enzymatic activities in vitro, (e.g. the ability to synthesize adenosine 5'-tetraphosphate and other JA conjugates), but there are no data to show whether JAR1 catalyzes many of these reactions in vivo. JAR1 is involved in pathogen defense, sensitivity to ozone, and wound responses.","JASMONATE RESISTANT 1 (JAR1)","JASMONATE RESISTANT 1 (JAR1); (ATGH3.11)"]
["AT5G20900","black","jasmonate-zim-domain protein 12;(source:Araport11)","JASMONATE-ZIM-DOMAIN PROTEIN 12 (JAZ12)","JASMONATE-ZIM-DOMAIN PROTEIN 12 (JAZ12); (TIFY3B)"]
["AT1G70700","black","JAZ9 is a protein presumed to be involved in jasmonate signaling. JAZ9 transcript levels rise in response to a jasmonate stimulus. JAZ9 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. The Jas domain appears to be important for JAZ9-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2.The mRNA is cell-to-cell mobile.","JASMONATE-ZIM-DOMAIN PROTEIN 9 (JAZ9)","JASMONATE-ZIM-DOMAIN PROTEIN 9 (JAZ9)"]
["AT3G15680","black","Encodes an RNA-binding protein having three Ranbp2-type zinc fingers involved in negative regulation of phloem development via translational suppression of SMXL4/5.","JULGI1 (JUL1)","JULGI1 (JUL1)"]
["AT5G46910","black","H3K27me3 demethylase involved in temperature and photoperiod dependent repressing of flowering.","JUMONJI 13 (JMJ13)","JUMONJI 13 (JMJ13)"]
["AT4G04850","black","Encodes a potassium efflux antiporter; has three splice forms KEA3.1, KEA3.2, and KEA3.3, KEA3.2 is the most abundant splice form in all plant organs (silique, flower, leaf and root). KEA3.1 and KEA3.3 are minor variants that can be found in flowers and in leaves. KEA3 is localized to the thylakoid membrane and enriched in the stromal lamellae. It allows proton efflux from the thylakoid lumen by proton/potassium antiport.","K+ EFFLUX ANTIPORTER 3 (KEA3)","K+ EFFLUX ANTIPORTER 3 (KEA3)"]
["AT2G19600","black","member of Putative potassium proton antiporter family","K+ EFFLUX ANTIPORTER 4 (KEA4)","K+ EFFLUX ANTIPORTER 4 (ATKEA4); (KEA4);K+ EFFLUX ANTIPORTER 4 (KEA4)"]
["AT2G26650","black","Encodes AKT1, a member of the Shaker family inward rectifying potassium channel predominantly expressed in predominantly in root hairs and root endodermis. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).","K+ TRANSPORTER 1 (KT1)","K+ TRANSPORTER 1 (AKT1); (ATAKT1);K+ TRANSPORTER 1 (KT1)"]
["AT2G35060","black","potassium transporter","K+ UPTAKE PERMEASE 11 (KUP11)","K+ UPTAKE PERMEASE 11 (KUP11)"]
["AT1G70300","black","potassium transporter","K+ UPTAKE PERMEASE 6 (KUP6)","K+ UPTAKE PERMEASE 6 (KUP6)"]
["AT2G20370","black","Encodes a xyloglucan galactosyltransferase located in the membrane of Golgi stacks that is involved in the biosynthesis of fucose. It is also involved in endomembrane organization. It is suggested that it is a dual-function protein that is responsible for actin organization and the synthesis of cell wall materials. The mRNA is cell-to-cell mobile.","MURUS 3 (MUR3)","KATAMARI 1 (KAM1);MURUS 3 (MUR3); (AtMUR3);SHORT ROOT IN SALT MEDIUM 3 (RSA3)"]
["AT1G15670","black","Encodes a member of a family of F-box proteins, called the KISS ME DEADLY (KMD) family, that targets type-B ARR proteins for degradation and is involved in the negative regulation of the cytokinin response. Also named as KFB1, a member of a group of Kelch repeat F-box proteins that negatively regulate phenylpropanoid biosynthesis by targeting the phenypropanoid biosynthesis enzyme phenylalanine ammonia-lyase.","KISS ME DEADLY 2 (KMD2)","KELCH REPEAT F-BOX 1 (KFB01);KISS ME DEADLY 2 (KMD2)"]
["AT2G30410","black","mutant has embryo defect; enlarged embryo cells and endosperm nuclei; Tubulin Folding Cofactor A","KIESEL (KIS)","KIESEL (KIS);TUBULIN FOLDING FACTOR A (TFCA)"]
["AT3G02880","black","Membrane localized LRR kinase that interacts with and regulates transmembrane transporters either directly or as co-regulators. Commonly-enriched candidate LPS-interacting PM-associated proteins from the three affinity chromatography systems with LPS chemotype Xcc 8530 as ligand.","KINASE 7 (KIN7)","KINASE 7 (KIN7);QIAN SHOU KINASE1 (QSK1)"]
["AT4G27180","black","kinesin heavy chain subunit","KINESIN 2 (ATK2)","KINESIN 2 (ATK2);KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA B (KATB)"]
["AT4G10840","black","CMU1 and CMU2 along with FRA1 contributes to lateral stability of cortical microtubules.","KINESIN LIGHT CHAIN-RELATED 1 (KLCR1)","KINESIN LIGHT CHAIN-RELATED 1 (KLCR1); (CMU1)"]
["AT3G50630","black","Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. A member of seven KRP genes found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. Gene was isolated from a yeast two hybrid screen as an interacting protein of CDC2A. Recombinant protein has a strong kinase inhibitor activity in vitro. Transcript is expressed in all tissues examined but is differentially distributed from ICK1. Controls the onset of the endoreduplication cycle through inhibition of CDKA;1. The KRP2 protein abundance is regulated by proteolysis through CDKB1;1 phosphorylation.","KIP-RELATED PROTEIN 2 (KRP2)","KIP-RELATED PROTEIN 2 (KRP2); (ICK2)"]
["AT1G13580","black","Encodes a ceramide synthase that together with LOH1 is essential for production of ceramides containing Very Long Chain Fatty acid VLCFA-Ceramides(mainly C 22 to 26).","LAG1 LONGEVITY ASSURANCE HOMOLOG 3 (LAG13)","LAG1 LONGEVITY ASSURANCE HOMOLOG 3 (LAG13);LAG ONE HOMOLOGUE 3 (LOH3)"]
["AT3G18140","black","Encodes LST8-1, involved in regulating amino acid accumulation and the synthesis of myo-inositol and raffinose during plant adaptation to long days.","LETHAL WITH SEC THIRTEEN 8-1 (LST8-1)","LETHAL WITH SEC THIRTEEN 8-1 (LST8-1)"]
["AT3G24480","black","Leucine-rich repeat (LRR) family protein;(source:Araport11)","LEUCINE-RICH REPEAT EXTENSIN 4 (LRX4)","LEUCINE-RICH REPEAT EXTENSIN 4 (LRX4)"]
["AT1G07650","black","Leucine-rich repeat receptor-like kinase with extracellular malectin-like domain, which possesses cell death induction activity in plant leaves.","LEUCINE-RICH REPEAT RECEPTOR-LIKE KINASE WITH EXTRACELLULAR MALECTIN-LIKE DOMAIN 1 (LMK1)","LEUCINE-RICH REPEAT RECEPTOR-LIKE KINASE WITH EXTRACELLULAR MALECTIN-LIKE DOMAIN 1 (LMK1)"]
["AT4G13340","black","Leucine rich extensin protein involved in cell wall biogenesis and organization. Interacts with several members of the RALF family of ligand peptides.","LEUCINE-RICH REPEAT/EXTENSIN 3 (LRX3)","LEUCINE-RICH REPEAT/EXTENSIN 3 (LRX3)"]
["AT4G15470","black","Bax inhibitor-1 family protein;(source:Araport11)","LIFEGUARD 5 (LFG5)","LIFEGUARD 5 (LFG5); (ATLFG5)"]
["AT2G40100","black","Lhcb4:3 protein (Lhcb4.3, light harvesting complex of photosystem II The mRNA is cell-to-cell mobile.","LIGHT HARVESTING COMPLEX PHOTOSYSTEM II (LHCB4.3)","LIGHT HARVESTING COMPLEX PHOTOSYSTEM II (LHCB4.3); (LHCB8)"]
["AT2G15230","black","Lipase active on medium and short chain triacylglycerols, but not on phospho- or galactolipids. Active between pH4 and 7 with an optimum at pH6. Knock-out mutant has not obvious phenotype. Predicted to be extracellular.","LIPASE 1 (LIP1)","LIPASE 1 (ATLIP1);LIPASE 1 (LIP1)"]
["AT4G22550","black","Phosphatidic acid phosphatase (PAP2) family protein;(source:Araport11)","LIPID PHOSPHATE PHOSPHATASE BETA (LPPBETA)","LIPID PHOSPHATE PHOSPHATASE BETA (LPPBETA)"]
["AT1G25145","black","UDP-3-O-acyl N-acetylglycosamine deacetylase family protein;(source:Araport11)","LIPID X C4 (LPXC4)","LIPID X C4 (LPXC4); (ATLPXC4)"]
["AT1G25210","black","UDP-3-O-acyl N-acetylglycosamine deacetylase family protein;(source:Araport11)","LIPID X C5 (LPXC5)","LIPID X C5 (LPXC5); (ATLPXC5)"]
["AT3G16950","black","encodes a plastid lipoamide dehydrogenase, subunit of the pyruvate dehydrogenase complex which provides acetyl-CoA for de novo fatty acid biosynthesis. The gene is highly expressed in developing seeds.","LIPOAMIDE DEHYDROGENASE 1 (LPD1)","LIPOAMIDE DEHYDROGENASE 1 (LPD1); (ptlpd1)"]
["AT3G02550","black","LOB domain-containing protein 41;(source:Araport11)","LOB DOMAIN-CONTAINING PROTEIN 41 (LBD41)","LOB DOMAIN-CONTAINING PROTEIN 41 (LBD41)"]
["AT1G77590","black","Encodes major plastidic long chain acyl-CoA synthetase with a slight substrate preference of oleic acid over any of the other fatty acids.","LONG CHAIN ACYL-COA SYNTHETASE 9 (LACS9)","LONG CHAIN ACYL-COA SYNTHETASE 9 (LACS9)"]
["AT4G23850","black","Encodes a long chain acyl CoA synthetase that catalyzes the addition of CoA onto IBA, the first step in its &#946;-oxidation.","LONG-CHAIN ACYL-COA SYNTHETASE 4 (LACS4)","LONG-CHAIN ACYL-COA SYNTHETASE 4 (LACS4)"]
["AT1G50120","black","Encodes a Golgi-localized protein which regulates pollen tube growth. Required for TGN formation and Golgi structure maintenance.","LOSS OF TGN (LOT)","LOSS OF TGN (LOT)"]
["AT5G08415","black","Radical SAM superfamily protein;(source:Araport11)","LIPOYL SYNTHASE 1 (LIP1)","LOST IN POLLEN TUBE GUIDANCE 1 (LIP1);LIPOYL SYNTHASE 1 (LIP1)"]
["AT1G73060","black","Low PSII Accumulation 3;(source:Araport11)","LOW PSII ACCUMULATION 3 (LPA3)","LOW PSII ACCUMULATION 3 (LPA3)"]
["AT1G71040","black","Encodes LPR2. Function together with LPR1 (AT1G23010) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability.","LOW PHOSPHATE ROOT2 (LPR2)","LOW PHOSPHATE ROOT2 (LPR2)"]
["AT1G20450","black","Encodes a gene induced by low temperature and dehydration. Inhibits e.coli growth while overexpressed. Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. LTI29 and LTI30 double overexpressors confer cold tolerance. Localized to membranes and cytoplasm.","EARLY RESPONSIVE TO DEHYDRATION 10 (ERD10)","LOW TEMPERATURE INDUCED 29 (LTI29);LOW TEMPERATURE INDUCED 45 (LTI45);EARLY RESPONSIVE TO DEHYDRATION 10 (ERD10)"]
["AT1G02170","black","Encodes a type I metacaspase. Two Arabidopsis metacaspases, AT1G02170 (MC1) and AT4G25110 (MC2) antagonistically control programmed cell death in Arabidopsis. MC1 is a positive regulator of cell death and requires conserved caspase-like putative catalytic residues for its function. MC2 negatively regulates cell death. This function is independent of the putative catalytic residues. A third type I Arabidopsis metacaspase is MC3 (AT5g64240).","METACASPASE 1 (MC1)","LSD ONE LIKE 3 (LOL3);ARABIDOPSIS THALIANA METACASPASE 1B (ATMCPB1);METACASPASE 1B (MCP1b);METACASPASE 1B (AtMCP1b);METACASPASE 1 (AMC1);ARABIDOPSIS THALIANA METACASPASE 1 (ATMC1);METACASPASE 1 (MC1)"]
["AT3G45420","black","Concanavalin A-like lectin protein kinase family protein;(source:Araport11)","L-TYPE LECTIN RECEPTOR KINASE I.4 (LECRK-I.4)","L-TYPE LECTIN RECEPTOR KINASE I.4 (LECRK-I.4)"]
["AT3G53810","black","Concanavalin A-like lectin protein kinase family protein;(source:Araport11)","L-TYPE LECTIN RECEPTOR KINASE IV.2 (LECRK-IV.2)","L-TYPE LECTIN RECEPTOR KINASE IV.2 (LECRK-IV.2)"]
["AT3G53380","black","Concanavalin A-like lectin protein kinase family protein;(source:Araport11)","L-TYPE LECTIN RECEPTOR KINASE VIII.1 (LECRK-VIII.1)","L-TYPE LECTIN RECEPTOR KINASE VIII.1 (LECRK-VIII.1)"]
["AT2G32640","black","Encodes a lycopene beta cyclase that catalyzes the addition of beta-ionone end groups to the end of lycopene molecules.","LYCOPENE BETA-CYLCASE (LCYB)","LYCOPENE BETA-CYLCASE (LCYB);SUPPRESSOR OF ZEAXANTHIN-LESS 1 (SZL1)"]
["AT4G33150","black","This is a splice variant of the LKR/SDH locus. It encodes a bifunctional polypeptide lysine-ketoglutarate reductase and saccharopine dehydrogenase involved in lysine degradation. There is another splice variant that encodes a mono saccharopine dehydrogenase protein. Gene expression is induced by abscisic acid, jasmonate, and under sucrose starvation.","LYSINE-KETOGLUTARATE REDUCTASE (LKR)","LYSINE-KETOGLUTARATE REDUCTASE (LKR);LYSINE-KETOGLUTARATE REDUCTASE/SACCHAROPINE DEHYDROGENASE (LKR/SDH)"]
["AT1G77630","black","Encodes a lysin-motif protein mediating bacterial peptidoglycan sensing and immunity to bacterial infection. Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant. It contains a C-terminal GPI anchor signal and is an ortholog of OsLYP4 and OsLYP6.","LYSIN-MOTIF (LYSM) DOMAIN PROTEIN 3 (LYM3)","LYSIN-MOTIF (LYSM) DOMAIN PROTEIN 3 (LYM3);LYSM-CONTAINING RECEPTOR PROTEIN 3 (LYP3)"]
["AT3G57650","black","Encodes an endoplasmic reticulum localized protein with lysophosphatidyl acyltransferase activity.","LYSOPHOSPHATIDYL ACYLTRANSFERASE 2 (LPAT2)","LYSOPHOSPHATIDYL ACYLTRANSFERASE 2 (LPAT2)"]
["AT1G52760","black","Encodes caffeoyl shikimate esterase and is involved in lignin biosynthesis. CSE converts caffeoyl shikimate to caffiate. Loss of function mutations have reduced lignin content and collapsed vessel elements. It is also reported to function as a lysophospholipase 2 (LysoPL2) involved in tolerance to cadmium-induced oxidative stress. Binds Acyl-CoA-binding protein 2 (ACBP2).","LYSOPHOSPHOLIPASE 2 (LysoPL2)","LYSOPHOSPHOLIPASE 2 (LysoPL2);CAFFEOYL SHIKIMATE ESTERASE (CSE); (ATMAGL3)"]
["AT1G63050","black","Encodes a lysophosphatidylcholine acyltransferase (LPCAT). Participates in the Lands cycle in developing seeds. Involved in triacylglycerol biosynthesis.","LYSOPHOSPHOLIPID ACYLTRANSFERASE 2 (LPLAT2)","LYSOPHOSPHOLIPID ACYLTRANSFERASE 2 (LPLAT2); (ATLPLAT2);LYSOPHOSPHATIDYLCHOLINE ACYLTRANSFERASE 2 (LPCAT2)"]
["AT5G22830","black","Transmembrane magnesium transporter that is essential for chloroplast development and photosynthesis. One of nine family members.","MAGNESIUM (MG) TRANSPORTER 10 (MGT10)","MAGNESIUM (MG) TRANSPORTER 10 (ATMGT10);MAGNESIUM (MG) TRANSPORTER 10 (MGT10); (MRS2-11); (GMN10);MAGNESIUM TRANSPORTER 10 (MGT10)"]
["AT1G03840","black","MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.","MAGPIE (MGP)","MAGPIE (MGP);INDETERMINATE DOMAIN 3 (IDD3)"]
["AT3G47810","black","Homolog of yeast retromer subunit VPS29. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.","MAIGO 1 (MAG1)","MAIGO 1 (MAG1);VACUOLAR PROTEIN SORTING 29 (VPS29); (ATVPS29)"]
["AT3G47700","black","Involved in transportation of seed storage proteins from the ER to the vacuole. Mutant seed cell accumulates the precursors of 12S globulin and 2S albumin instead of the vacuolar-located mature proteins. Member of MAG2 complex, involved in the development of vegetative organs.","MAIGO2 (MAG2)","MAIGO2 (MAG2)"]
["AT5G07020","black","Encodes an integral thylakoid membrane protein that interacts with PSII core complexes and contributes to the maintenance of PSII homeostasis upon exposure to photoinhibitory light conditions by participating in the protection and stabilization of PSII under photoinhibitory stress.","MAINTENANCE OF PSII UNDER HIGH LIGHT 1 (MPH1)","MAINTENANCE OF PSII UNDER HIGH LIGHT 1 (MPH1)"]
["AT4G34950","black","Major facilitator superfamily protein;(source:Araport11)","MAJOR FACILITATOR SUPERFAMILY 1 (MFS1)","MAJOR FACILITATOR SUPERFAMILY 1 (MFS1)"]
["AT3G21190","black","O-fucosyltransferase family protein;(source:Araport11)","MANNAN SYNTHESIS RELATED 1 (MSR1)","MANNAN SYNTHESIS RELATED 1 (MSR1); (ATMSR1)"]
["AT1G51630","black","O-fucosyltransferase family protein;(source:Araport11)","MANNAN SYNTHESIS RELATED 2 (MSR2)","MANNAN SYNTHESIS RELATED 2 (MSR2); (ATMSR2)"]
["AT1G27520","black","Glycosyl hydrolase family 47 protein;(source:Araport11)","MANNOSIDASE 5 (MNS5)","MANNOSIDASE 5 (MNS5); (ATEDEM1)"]
["AT3G06110","black","Encodes a nuclear-localized MAP kinase phosphatase. Plants with reduced levels of MKP2 transcripts are hypersensitive to ozone and ozone-mediated activation of MPK3 and MPK6 is prolonged in these plants.","MAPK PHOSPHATASE 2 (MKP2)","MAPK PHOSPHATASE 2 (MKP2);DUAL-SPECIFICITY PROTEIN PHOSPHATASE 1B (DSPTP1B)"]
["AT5G11850","black","MAP3 kinase involved phosphorylation of a critical Ser171 for OST1/SnRK2.6 activation.","MAPKKK DELTA-1 (MKD1)","MAPKKK DELTA-1 (MKD1); (RAF3); (RAF6); (M3Kdelta1)"]
["AT4G00310","black","Putative membrane lipoprotein;(source:Araport11)","EMBRYO SAC DEVELOPMENT ARREST 8 (EDA8)","MATERNAL EFFECT EMBRYO ARREST 46 (MEE46);EMBRYO SAC DEVELOPMENT ARREST 8 (EDA8)"]
["AT4G37300","black","maternal effect embryo arrest 59;(source:Araport11)","MATERNAL EFFECT EMBRYO ARREST 59 (MEE59)","MATERNAL EFFECT EMBRYO ARREST 59 (MEE59)"]
["AT5G05950","black","maternal effect embryo arrest 60;(source:Araport11)","MATERNAL EFFECT EMBRYO ARREST 60 (MEE60)","MATERNAL EFFECT EMBRYO ARREST 60 (MEE60)"]
["AT2G15530","black","RING/U-box superfamily protein;(source:Araport11)","MED25 BINDING RING-H2 PROTEIN 1 (MBR1)","MED25 BINDING RING-H2 PROTEIN 1 (MBR1); (CTL03)"]
["AT2G22370","black","Encodes a subunit of the mediator complex that affects flowering time and floral organ formation through FLOWERING LOCUS C (FLC) and AGAMOUS (AG). Together with MED20, another subunit of the head domain of MEDIATOR, MED18 is proposed to control the balance of salicylic acid and jasmonate associated defense pathways.","MEDIATOR 18 (MED18)","MEDIATOR 18 (MED18)"]
["AT5G09850","black","Transcription elongation factor (TFIIS) family protein;(source:Araport11)","MEDIATOR 26C (MED26C)","MEDIATOR 26C (MED26C)"]
["AT5G61960","black","A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML1 is a member of two sister clades of mei2-like gene family, AML1 through AML5 and belongs to the clade named ALM14. AML1 is expressed during early embryo development, particularly along embryonic axis at torpedo stage, in shoot apex (weaker expression) and in the organogenic regions of floral apices.","MEI2-LIKE PROTEIN 1 (ML1)","MEI2-LIKE PROTEIN 1 (ML1);MEI2-LIKE PROTEIN 1 (AML1)"]
["AT4G24290","black","MACPF protein which promotes pathogen resistance by activating SA signaling. Induces programmed cell death, bacterial pathogen resistance, and necrotrophic fungal pathogen sensitivity by activating the biosynthesis of tryptophan-derived indole glucosinolates and the salicylic acid signaling pathway dependent on the activity of enhanced disease susceptibility 1 (EDS1).","MEMBRANE ATTACK COMPLEX/PERFORIN-LIKE 2 (MACP2)","MEMBRANE ATTACK COMPLEX/PERFORIN-LIKE 2 (MACP2)"]
["AT5G15460","black","membrane-anchored ubiquitin-fold protein 2;(source:Araport11)","MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2 (MUB2)","MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2 (MUB2)"]
["AT1G64080","black","Encodes a member of the MAKR (MEMBRANE-ASSOCIATED KINASE REGULATOR) gene family. MAKRs have putative kinase interacting motifs and membrane localization signals. Known members include: AT5G26230 (MAKR1), AT1G64080 (MAKR2), AT2G37380 (MAKR3), AT2G39370 (MAKR4), AT5G52870 (MAKR5) and AT5G52900 (MAKR6).","MEMBRANE-ASSOCIATED KINASE REGULATOR 2 (MAKR2)","MEMBRANE-ASSOCIATED KINASE REGULATOR 2 (MAKR2)"]
["AT5G56795","black","one of the five metallothioneins (MTs) genes identified in Arabidopsis. MTs are cysteine-rich proteins required for heavy metal tolerance. The MT1b gene, however, is indicated to be inactive.","METALLOTHIONEIN 1B (MT1B)","METALLOTHIONEIN 1B (MT1B)"]
["AT5G02380","black","cysteine-rich protein with copper-binding activity","METALLOTHIONEIN 2B (MT2B)","METALLOTHIONEIN 2B (MT2B)"]
["AT2G36880","black","Topoisomerase VI physically interacts with S-adenosylmethionine synthase methionine adenosyl transferase 3 (MAT3), which is required for H3K9me2. A Topoisomerase VI defect affects MAT3 occupancy on heterochromatic elements and its exclusion from euchromatic islands, thereby providing a possible mechanistic explanation to the essential role of Topoisomerase VI in the delimitation of chromatin domains.","METHIONINE ADENOSYLTRANSFERASE 3 (MAT3)","METHIONINE ADENOSYLTRANSFERASE 3 (MAT3)"]
["AT3G25740","black","Encodes a plastid localized methionine aminopeptidase. Formerly called MAP1C, now called MAP1B.","METHIONINE AMINOPEPTIDASE 1C (MAP1B)","METHIONINE AMINOPEPTIDASE 1C (MAP1B);METHIONINE AMINOPEPTIDASE 1C (MAP1C)"]
["AT4G21860","black","2-Cys methionine sulfoxide reductase.","METHIONINE SULFOXIDE REDUCTASE B 2 (MSRB2)","METHIONINE SULFOXIDE REDUCTASE B 2 (MSRB2)"]
["AT4G22745","black","Protein containing methyl-CpG-binding domain.","METHYL-CPG-BINDING DOMAIN 1 (MBD1)","METHYL-CPG-BINDING DOMAIN 1 (MBD1)"]
["AT3G54250","black","Encodes mevalonate diphosphate decarboxylase, the enzyme that catalyzes the synthesis of isopentenyl diphosphate, used in sterol and isoprenoid biosynthesis.","MEVALONATE 5-DIPHOSPHATE DECARBOXYLASE 2 (MDD2)","MEVALONATE 5-DIPHOSPHATE DECARBOXYLASE 2 (MDD2); (ATMDD2)"]
["AT1G68060","black","Encodes a microtubule associated protein (MAP70-1). Expressed in all tissues.","MICROTUBULE-ASSOCIATED PROTEINS 70-1 (MAP70-1)","MICROTUBULE-ASSOCIATED PROTEINS 70-1 (MAP70-1);MICROTUBULE-ASSOCIATED PROTEINS 70-1 (ATMAP70-1)"]
["AT1G14840","black","Encodes a microtubule associated protein (MAP70-4). Expressed in all tissues.","MICROTUBULE-ASSOCIATED PROTEINS 70-4 (MAP70-4)","MICROTUBULE-ASSOCIATED PROTEINS 70-4 (ATMAP70-4);MICROTUBULE-ASSOCIATED PROTEINS 70-4 (MAP70-4)"]
["AT5G01650","black","Chemokine-like MDL protein; modulate flowering time and innate immunity in plants.","MIF/D-DT-LIKE 2 (MDL2)","MIF/D-DT-LIKE 2 (MDL2)"]
["AT2G44620","black","Encodes a mitochondrial acyl carrier protein (ACP) that forms part of the bridge domain which connects the membrane and the peripheral arm of mitochondrial complex I and contributes to the mitochondrial respiratory chain. Its acylated form is predominantly present in the mitochondrial membrane while the non-acylated form is soluble. The mRNA is cell-to-cell mobile. The designations of mtACP-1 and mtACP-2 in Klusch et al. 2021 (DOI:10.1093/plcell/koab092) are flipped with respect to the nomenclature published by Meyer et al. 2007 (DOI:10.1007/s11103-007-9156-9).","MITOCHONDRIAL ACYL CARRIER PROTEIN 1 (MTACP1)","MITOCHONDRIAL ACYL CARRIER PROTEIN 1 (MTACP1);MITOCHONDRIAL ACYL CARRIER PROTEIN 1 (MTACP-1)"]
["AT1G54220","black","Encodes a subunit of the mitochondrial pyruvate dehydrogenase complex.","MITOCHONDRIAL PYRUVATE DEHYDROGENASE SUBUNIT 2-3 (MTE2-3)","MITOCHONDRIAL PYRUVATE DEHYDROGENASE SUBUNIT 2-3 (MTE2-3)"]
["AT2G34520","black","nuclear-encoded mitochondrial ribosomal protein S14","MITOCHONDRIAL RIBOSOMAL PROTEIN S14 (RPS14)","MITOCHONDRIAL RIBOSOMAL PROTEIN S14 (RPS14);RIBOSOMAL PROTEIN US14M (US14M)"]
["AT5G14720","black","Membrane-localized protein kinase which regulates thermomorphogenesis.","TARGET OF TEMPERATURE3 (TOT3)","MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE KINASE4 (MAP4K4);TARGET OF TEMPERATURE3 (TOT3)"]
["AT1G23260","black","MMZ1/UEV1A encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UEV1A can form diubiquitin and triubiquitin chains in combination with UBC13A/UBC35 in vitro. It can also functionally complement an mms2 mutation in budding yeast, both by increasing mms2 mutant viability in the presence of the DNA damaging agent MMS, and by reducing the rate of spontaneous DNA mutation. However, a combination of MMZ1/UEV1A and UBC13A do not do a good job of rescuing an mms2 ubc13 double mutant in yeast. MMZ1/UEV1A transcripts are found at low levels in most plant organs, but cannot be detected in the pollen. Transcript levels do not appear to be stress-inducible. The uev1a-1 mutant shows normal sensitivity to MMS in germination assays suggesting that UEV1A is not required for DNA damage tolerance during this developmental stage.","MMS ZWEI HOMOLOGUE 1 (MMZ1)","MMS ZWEI HOMOLOGUE 1 (MMZ1);UBIQUITIN E2 VARIANT 1A (UEV1A)"]
["AT1G70660","black","MMZ2/UEV1B encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UEV1A can form diubiquitin and triubiquitin chains in combination with UBC13A/UBC35 in vitro. It can also functionally complement an mms2 mutation in budding yeast, both by increasing mms2 mutant viability in the presence of the DNA damaging agent MMS, and by reducing the rate of spontaneous DNA mutation. However, a combination of MMZ2/UEV1B and UBC13A do not do a good job of rescuing an mms2 ubc13 double mutant in yeast. MMZ2/UEV1B transcripts are found in most plant organs, but not in the pollen or in seedlings 6 hours or 2 days post-germination. The transcript levels do not appear to be stress-inducible. The mRNA is cell-to-cell mobile.","MMS ZWEI HOMOLOGUE 2 (MMZ2)","MMS ZWEI HOMOLOGUE 2 (MMZ2);UBIQUITIN E2 VARIANT 1B (UEV1B)"]
["AT2G28390","black","SAND family protein;(source:Araport11)","MONENSIN SENSITIVITY1 (MON1)","MONENSIN SENSITIVITY1 (MON1)"]
["AT1G19850","black","Encodes a transcription factor (IAA24) mediating embryo axis formation and vascular development. Similar to AUXIN RESPONSIVE FACTOR 1 (ARF1) shown to bind to auxin responsive elements (AREs), and to the maize transcriptional activator VIVIPAROUS 1( VP1). In situ hybridization shows expression in provascular tissue of embryos, the emerging shoot primordia, then is restricted to provascular tissue, and in the root central vascular cylinder.","MONOPTEROS (MP)","MONOPTEROS (MP);AUXIN RESPONSE FACTOR 5 (ARF5);INDOLE-3-ACETIC ACID INDUCIBLE 24 (IAA24);MOVEMENT PROTEIN (MP)"]
["AT2G05990","black","Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves. The mRNA is cell-to-cell mobile.","MOSAIC DEATH 1 (MOD1)","MOSAIC DEATH 1 (MOD1);ENOYL-ACP REDUCTASE 1 (ENR1)"]
["AT1G28280","black","VQ motif-containing protein;(source:Araport11)","MPK3/6-TARGETED VQP 1 (MVQ1)","MPK3/6-TARGETED VQP 1 (MVQ1)"]
["AT5G09870","black","Encodes a cellulose synthase CESA5 that produces seed mucilage cellulose.Mutants are defective in seed coat mucilage.Involved in the regulation of mucilage composition and/or mucilage synthesis.","CELLULOSE SYNTHASE 5 (CESA5)","MUCILAGE-MODIFIED 3 (MUM3);CELLULOSE SYNTHASE 5 (CESA5)"]
["AT1G28240","black","strawberry notch protein (DUF616);(source:Araport11)","MUCILAGE-RELATED 70 (MUCI70)","MUCILAGE-RELATED 70 (MUCI70)"]
["AT2G22900","black","Encodes MUCI10, a galactomannan-1,6-galactosyltransferase. MUCI10 likely decorates glucomannan, synthesized by CSLA2, with galactose residues in vivo. The degree of galactosylation is essential for the synthesis of the GGM backbone, the structure of cellulose, mucilage density, as well as the adherence of pectin.","MUCILAGE-RELATED10 (MUCI10)","MUCILAGE-RELATED10 (MUCI10);MANNAN ALPHA-GALACTOSYL TRANSFERASE1 (MAGT1)"]
["AT2G43290","black","Calmodulin-like MSS3.Encodes an endomembrane localized member of the CML subfamily VII. Contains a canonical CaM domain and unique N-terminal extension that distinguishes it from other members of the subfamily.","MULTICOPY SUPPRESSORS OF SNF4 DEFICIENCY IN YEAST 3 (MSS3)","MULTICOPY SUPPRESSORS OF SNF4 DEFICIENCY IN YEAST 3 (MSS3); (ATCML5)"]
["AT3G03680","black","Member of a family of Multiple C2 Domain and Transmembrane Region Proteins.","MULTIPLE C2 DOMAIN AND TRANSMEMBRANE REGION PROTEIN 14 (MCTP14)","MULTIPLE C2 DOMAIN AND TRANSMEMBRANE REGION PROTEIN 14 (MCTP14)"]
["AT5G12970","black","Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein;(source:Araport11)","MULTIPLE C2 DOMAIN AND TRANSMEMBRANE REGION PROTEIN 5 (MCTP5)","MULTIPLE C2 DOMAIN AND TRANSMEMBRANE REGION PROTEIN 5 (MCTP5)"]
["AT1G06180","black","member of MYB3R- and R2R3- type MYB- encoding genes","MYB DOMAIN PROTEIN 13 (MYB13)","MYB DOMAIN PROTEIN 13 (ATMYB13); (ATMYBLFGN);MYB DOMAIN PROTEIN 13 (MYB13)"]
["AT3G47600","black","Encodes a putative transcription factor (MYB94).","MYB DOMAIN PROTEIN 94 (MYB94)","MYB DOMAIN PROTEIN 94 (MYB94); (ATMYBCP70);MYB DOMAIN PROTEIN 94 (ATMYB94)"]
["AT5G58730","black","pfkB-like carbohydrate kinase family protein;(source:Araport11)","MYO-INOSITOL KINASE (MIK)","MYO-INOSITOL KINASE (MIK)"]
["AT5G20490","black","Encodes a member of the type XI myosin protein family involved in root hair growth, trichome development, and organelle trafficking. Required for fast root hair growth. This gene appears to be expressed at low levels throughout the plant.","(XIK)","MYOSIN XI-17 (XI-17); (XI-K);MYOSIN XI K (ATXIK); (XIK)"]
["AT2G20290","black","member of Myosin-like proteins","MYOSIN-LIKE PROTEIN XIG (XIG)","MYOSIN-LIKE PROTEIN XIG (XIG);MYOSIN XI G (ATXIG)"]
["AT4G04880","black","Encodes an N6-mAMP deaminase (ADAL, renamed MAPDA) that catabolizes N6-mAMP derived from turnover of m6A-modified RNA to inosine monophosphate in vivo by hydrolytically removing the aminomethyl group.","N6-METHYL AMP DEAMINASE (MAPDA)","N6-METHYL AMP DEAMINASE (MAPDA);AMINOHYDROLASE (ADAL)"]
["AT5G13690","black","Encodes an enzyme that is predicted to act as an alpha-N-acetylglucosaminidase (NAGLU). An naglu mutant arrests early in seed development but does not appear to have male or female gametophytic defects. Transcript levels for this gene are increased during reproductive development.","CYCLOPS 1 (CYL1)","N-ACETYL-GLUCOSAMINIDASE (NAGLU);CYCLOPS 1 (CYL1)"]
["AT5G08740","black","Encodes a dedicated Type II NADPH dehydrogenase that catalyzes the penultimate step in phylloquinone (vitamin K1). biosynthesis","NAD(P)H DEHYDROGENASE C1 (NDC1)","NAD(P)H DEHYDROGENASE C1 (NDC1)"]
["AT5G17770","black","Encodes NADH:cytochrome (Cyt) b5 reductase that displayed strict specificity to NADH for the reduction of a recombinant Cyt b5 (AtB5-A), whereas no Cyt b5 reduction was observed when NADPH was used as the electron donor.","NADH:CYTOCHROME B5 REDUCTASE 1 (CBR)","NADH:CYTOCHROME B5 REDUCTASE 1 (CBR);NADH:CYTOCHROME B5 REDUCTASE 1 (CBR1);NADH:CYTOCHROME B5 REDUCTASE 1 (ATCBR)"]
["AT5G11670","black","The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME2 is presumably a cytosolic enzyme involved in malate metabolism and possibly assisting the oxidative pentose phosphate pathway. AtNADP-ME2 counts for the major part of NADP-ME activity in mature tissues of Arabidopsis.","NADP-MALIC ENZYME 2 (NADP-ME2)","NADP-MALIC ENZYME 2 (NADP-ME2);ARABIDOPSIS THALIANA NADP-MALIC ENZYME 2 (ATNADP-ME2)"]
["AT1G56080","black","NAI1 interacting protein, involved in ER body formation.","NAI2-INTERACTING PROTEIN 3 (NAIP3)","NAI2-INTERACTING PROTEIN 3 (NAIP3)"]
["AT4G37590","black","A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis.","NAKED PINS IN YUC MUTANTS 5 (NPY5)","NAKED PINS IN YUC MUTANTS 5 (NPY5);MAB4/ENP/NPY1-LIKE 1 (MEL1)"]
["AT5G58450","black","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","TRANSCURVATA 2 (TCU2)","NATB AUXILIARY SUBUNIT (NAA25);TRANSCURVATA 2 (TCU2)"]
["AT2G23150","black","Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp4, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination.","NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3 (NRAMP3)","NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 3 (NRAMP3); (ATNRAMP3)"]
["AT3G52640","black","Encodes a gamma-secretase subunit. Associates with other subunits in intracellular membrane compartments.","NCT (NCT)","NCT (NCT)"]
["AT2G27080","black","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11)","NDR/HIN1-LIKE 13 (NHL13)","NDR/HIN1-LIKE 13 (NHL13)"]
["AT4G14760","black","kinase interacting (KIP1-like) family protein;(source:Araport11)","NETWORKED 1B (NET1B)","NETWORKED 1B (NET1B)"]
["AT4G36940","black","nicotinate phosphoribosyltransferase 1;(source:Araport11)","NICOTINATE PHOSPHORIBOSYLTRANSFERASE 1 (NAPRT1)","NICOTINATE PHOSPHORIBOSYLTRANSFERASE 1 (NAPRT1)"]
["AT3G13050","black","Encodes a plant nicotinate transporter than can also transport trigonelline (N-methylnicotinate).","NICOTINATE TRANSPORTER (NiaP)","NICOTINATE TRANSPORTER (NiaP); (AtNiaP)"]
["AT5G55810","black","encodes a bi-functional enzyme that expresses both nicotinamide-nucleotide adenylyltransferase (2.7.7.1) and nicotinate-nucleotide adenylyltransferase (2.7.7.18)activity.","NICOTINATE/NICOTINAMIDE MONONUCLEOTIDE ADENYLTRANSFERASE (NMNAT)","NICOTINATE/NICOTINAMIDE MONONUCLEOTIDE ADENYLTRANSFERASE (NMNAT)"]
["AT3G04810","black","Encodes AtNek2, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.","NIMA-RELATED KINASE 2 (NEK2)","NIMA-RELATED KINASE 2 (ATNEK2);NIMA-RELATED KINASE 2 (NEK2)"]
["AT1G54510","black","Encodes AtNEK1, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.","NIMA-RELATED SERINE/THREONINE KINASE 1 (NEK1)","NIMA-RELATED SERINE/THREONINE KINASE 1 (NEK1);NIMA-RELATED SERINE/THREONINE KINASE 1 (ATNEK1)"]
["AT1G64530","black","Nitrate inducible DNA binding transcriptional activator.","NIN-LIKE PROTEIN 6 (NLP6)","NIN-LIKE PROTEIN 6 (NLP6)"]
["AT1G12110","black","Encodes NRT1.1 (CHL1), a dual-affinity nitrate transporter. The protein is expressed in guard cells and function in stomatal opening. Mutants have less transpiration and are more tolerant to drought. Expressed in lateral roots. Involved in nitrate signaling which enables the plant root system to detect and exploit nitrate-rich soil patches. Comparing to the wild type, the mutant displays a strongly decreased lateral root proliferation phenotype in nitrate rich patches on growth medium. Affects flowering time via interaction with the FLC dependent flowering pathway to influence its target gene FT.","NRT1/ PTR FAMILY 6.3 (NPF6.3)","NITRATE TRANSPORTER 1.1 (NRT1.1); (CHL1-1);NITRATE TRANSPORTER 1 (NRT1); (B-1);ARABIDOPSIS THALIANA NITRATE TRANSPORTER 1 (ATNRT1);CHLORINA 1 (CHL1);NRT1/ PTR FAMILY 6.3 (NPF6.3); (ATNPF6.3)"]
["AT3G16180","black","Encodes a low affinity nitrate transporter that is expressed in the plasma membrane and found in the phloem of the major veins of leaves. It is responsible for nitrate redistribution to young leaves.","NITRATE TRANSPORTER 1.12 (NRT1.12)","NITRATE TRANSPORTER 1.12 (NRT1.12)"]
["AT5G11790","black","Plays a role in dehydration stress response.","N-MYC DOWNREGULATED-LIKE 2 (NDL2)","N-MYC DOWNREGULATED-LIKE 2 (NDL2)"]
["AT2G43040","black","encodes a calmodulin-binding protein that is expressed specifically in pollen and is required for pollen development.","NO POLLEN GERMINATION 1 (NPG1)","NO POLLEN GERMINATION 1 (NPG1)"]
["AT4G25030","black","Plastid localized protein of unknown function. Mutants are more susceptible to P. syringae and produce less callose upon infection.","NON HOST RESISTANCE 2B (ATNHR2B)","NON HOST RESISTANCE 2B (ATNHR2B)"]
["AT3G48610","black","Non-specific phospholipase C6 involved in gametophyte development.","NON-SPECIFIC PHOSPHOLIPASE C6 (NPC6)","NON-SPECIFIC PHOSPHOLIPASE C6 (NPC6)"]
["AT1G69850","black","Encodes an inducible component of low-affinity nitrate uptake. mRNA found primarily in root hairs and the epidermis of roots. It also acts as an ABA importer at the site of ABA biosynthesis and is important for the regulation of stomatal aperture in inflorescence stems.","NRT1/ PTR FAMILY 4.6 (NPF4.6)","NRT1/ PTR FAMILY 4.6 (NPF4.6); (ATNPF4.6);NITRATE TRANSPORTER 1:2 (ATNRT1:2); (NRT1.2);NITRATE TRANSPORTER 1:2 (NRT1:2);ABA-IMPORTING TRANSPORTER 1 (AIT1); (NTL1)"]
["AT3G21670","black","Major facilitator superfamily protein;(source:Araport11)","NRT1/ PTR FAMILY 6.4 (NPF6.4)","NRT1/ PTR FAMILY 6.4 (NPF6.4); (ATNPF6.4)"]
["AT3G25560","black","NSP-interacting kinase 2;(source:Araport11)","NSP-INTERACTING KINASE 2 (NIK2)","NSP-INTERACTING KINASE 2 (NIK2); (ATNIK2)"]
["AT4G33080","black","Ubiquitously expressed protein kinase.","NUCLEAR DBF2-RELATED 6 (NDR6)","NUCLEAR DBF2-RELATED 6 (NDR6)"]
["AT5G09890","black","Ubiquitously expressed protein kinase.","NUCLEAR DBF2-RELATED 8 (NDR8)","NUCLEAR DBF2-RELATED 8 (NDR8)"]
["AT1G54160","black","Encodes a member of the CCAAT-binding transcription factor (CBF-B/NF-YA) family. Expression is upregulated in response to ABA and drought. This regulation appears to be mediated by MIR169A which is downregulated in response to drought. NFYA5 is a target of MIR169A. Loss of function mutations are hypersensitive to drought.","NUCLEAR FACTOR Y, SUBUNIT A5 (NF-YA5)","NUCLEAR FACTOR Y A5 (NFYA5);NUCLEAR FACTOR Y, SUBUNIT A5 (NF-YA5)"]
["AT5G38140","black","nuclear factor Y, subunit C12;(source:Araport11)","NUCLEAR FACTOR Y, SUBUNIT C12 (NF-YC12)","NUCLEAR FACTOR Y, SUBUNIT C12 (NF-YC12)"]
["AT1G54830","black","Encodes a NUCLEAR FACTOR-Y C (NF-YC) homologue NF-YC3. NF-YC3., NF-YC4 and NF-YC9 redundantly modulate GA- and ABA-mediated seed germination.","NUCLEAR FACTOR Y, SUBUNIT C3 (NF-YC3)","NUCLEAR FACTOR Y, SUBUNIT C3 (NF-YC3)"]
["AT5G58740","black","Member of the family of NudC proteins. Over-expression improves free radical sacenving activity and antioxidant status, promotes root growth and branching under abiotic stress.","NUCLEAR MIGRATION 1 (NMIG1)","NUCLEAR MIGRATION 1 (NMIG1)"]
["AT2G40030","black","Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB1 and the E. coli RNA polymerase beta prime subunit. Required for normal RNA-directed DNA methylation at non-CG methylation sites and transgene silencing. The nrpe1 mutant is more resistant to biotrophic pathogens and is primed to activate salicylic acid-dependent defence genes.","NUCLEAR RNA POLYMERASE D1B (NRPD1B)","NUCLEAR RNA POLYMERASE D1B (NRPD1B); (DRD3); (ATNRPD1B);DEFECTIVE IN MERISTEM SILENCING 5 (DMS5); (NRPE1); (POLV)"]
["AT3G18090","black","Encodes a subunit of RNA polymerase IV (aka RNA polymerase D). NRPD2b is closely related to NRPD2a, but has lower levels of transcription and does not affect endogenous siRNA when mutated.","NUCLEAR RNA POLYMERASE D2B (NRPD2B)","NUCLEAR RNA POLYMERASE D2B (NRPD2B)"]
["AT1G32070","black","Encodes a acetyltransferase (NSI) that is localized in the nucleus and chloroplast. It interacts with the geminivirus movement protein NSP. This interaction is required for viral infection and systemic spread. Acetylates the viral coat protein (CP) in vitro, but not NSP. NSP inhibits NSI activity in vitro. In the chloroplast NSI functions in the dynamic reorganization thylakoid membrane complexes. NSI is highly transcribed in phloem and in xylem parenchyma cells, and in the apical meristem and guard cells, within young tissues in Arabidopsis, and its expression is turned off as tissues mature.Mutants have reduced melatonin and anthocyanin levels and do not accumulate the PSI-LHCII state transition complex.The protein has distinct lysine acetylation and relaxed N-terminal acetylation specificities on chloroplast proteins as determined by in vitro as well as in vivo analyses using quantitative protein mass spectrometry (PMID:32633465).","NUCLEAR SHUTTLE INTERACTING (NSI)","NUCLEAR SHUTTLE INTERACTING (ATNSI);NUCLEAR SHUTTLE INTERACTING (NSI);GCN5&#8208;RELATED N&#8208;ACETYLTRANSFERASE 2 (GNAT2);SEROTONIN N-ACETYLTRANSFERASE 1 (SNAT1);SEROTONIN N-ACETYL TRANSFERASE (SNAT)"]
["AT1G27970","black","Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport. The mRNA is cell-to-cell mobile.","NUCLEAR TRANSPORT FACTOR 2B (NTF2B)","NUCLEAR TRANSPORT FACTOR 2B (NTF2B)"]
["AT5G03555","black","Encodes PLUTO (plastidic nucleobase transporter), a member of the Nucleobase:Cation-Symporter1 protein family, capable of transporting purine and pyrimidine nucleobases.","NUCLEOBASE CATION SYMPORTER 1 (NCS1)","NUCLEOBASE CATION SYMPORTER 1 (NCS1);PLASTIDIC NUCLEOBASE TRANSPORTER (PLUTO); (ATNCS1)"]
["AT3G46200","black","Encodes a GDP-d-mannose pyrophosphohydrolase that is involved in the regulation of GDP-d-Man levels affecting ammonium sensitivity via modulation of protein N-glycosylation in the roots.","NUDIX HYDROLASE HOMOLOG 9 (NUDT9)","NUDIX HYDROLASE HOMOLOG 9 (aTNUDT9);NUDIX HYDROLASE HOMOLOG 9 (NUDT9);NUDIX HYDROLASE HOMOLOG 9 (NUDX9); (ATNUDX9)"]
["AT5G04900","black","Encodes a chlorophyll b reducatase involved in the degradation of chlorophyll b and LHCII (light harvesting complex II).","NYC1-LIKE (NOL)","NYC1-LIKE (NOL)"]
["AT5G58930","black","hypothetical protein (DUF740);(source:Araport11)","OCTOPUS LIKE 4 (OPL4)","OCTOPUS LIKE 4 (OPL4)"]
["AT3G14360","black","Lipid droplet-associated triacylglycerol lipase (TAG) involved in pollen tube growth. TAG is possibly a direct precursor for the synthesis of membrane lipids in pollen tubes.","OIL BODY LIPASE 1 (ATOBL1)","OIL BODY LIPASE 1 (ATOBL1); (OBL1)"]
["AT4G16370","black","Encodes a phloem-specific iron transporter that is essential for systemic iron signaling and redistribution of iron and cadmium. It loads iron into the phloem, facilitates iron recirculation from the xylem to the phloem, and regulates both shoot-to-root iron signaling and iron redistribution from mature to developing tissues.","OLIGOPEPTIDE TRANSPORTER (OPT3)","OLIGOPEPTIDE TRANSPORTER (OPT3); (OPT3);OLIGOPEPTIDE TRANSPORTER (ATOPT3)"]
["AT2G01720","black","Ribophorin I;(source:Araport11)","OLIGOSACCHARYLTRANSFERASE 1A (OST1A)","OLIGOSACCHARYLTRANSFERASE 1A (OST1A)"]
["AT5G54160","black","A caffeic acid/5-hydroxyferulic acid O-methyltransferase. Interacts with 14-4-3 proteins in yeast 2 hybrid assay. AtOMT1 (At5g54160) encodes a flavonol 3?-O-methyltransferase that is highly active towards quercetin and myricetin. The substrate specificity identifies the enzyme as flavonol 3?-methyltransferase which replaces the former annotation of the gene to encode a caffeic acid/5-hydroxyferulic acid O-methyltransferase The mRNA is cell-to-cell mobile.","O-METHYLTRANSFERASE 1 (OMT1)","O-METHYLTRANSFERASE 1 (OMT1);O-METHYLTRANSFERASE 3 (OMT3); (ATCOMT);CAFFEATE O-METHYLTRANSFERASE 1 (COMT1);O-METHYLTRANSFERASE 1 (ATOMT1)"]
["AT5G02120","black","Encodes a one helix protein homologous to cyanobacterial high-light inducible proteins. The protein is localized to the thylakoid membrane and its transcript is transiently induced by exposure to high light conditions. The mRNA is cell-to-cell mobile.","ONE-HELIX LHC-LIKE PROTEIN 1 (OHP1)","ONE HELIX PROTEIN (OHP);ONE-HELIX LHC-LIKE PROTEIN 1 (OHP1);PIGMENT DEFECTIVE 335 (PDE335)"]
["AT3G48810","black","Pentatricopeptide repeat proteins involved in mitochondrial RNA processing.","ORGANELLE TRANSCRIPT PROCESSING 439 (OTP439)","ORGANELLE TRANSCRIPT PROCESSING 439 (OTP439)"]
["AT4G22540","black","Part of the protein complex consisting of AT4G22540/OSBP2A, the ER resident protein AT3G60600/VAP27-1 and AT2G45170/ATG8e that mediate the ER-autophagosome membrane contact site.","OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2A (ORP2A)","OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2A (ORP2A)"]
["AT1G50670","black","OTU-like cysteine protease family protein;(source:Araport11)","OVARIAN TUMOR DOMAIN (OTU)-CONTAINING DUB (DEUBIQUITILATING ENZYME) 2 (OTU2)","OVARIAN TUMOR DOMAIN (OTU)-CONTAINING DUB (DEUBIQUITILATING ENZYME) 2 (OTU2)"]
["AT1G60220","black","Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sGFP:OTS1 protein accumulates in the nucleus. Double mutant analysis with ULP1C/OTS2 indicates that these genes are involved in salt stress responses and flowering time regulation. Over-expression of 35S:OTS1 increases salt tolerance and reduces the level of SUMO-conjugated proteins. OTS1 transcript levels do not appear to change in response to salt, but, salt stress reduces the level of OTS1 protein in a proteasome-dependent manner.","UB-LIKE PROTEASE 1D (ULP1D)","OVERLY TOLERANT TO SALT 1 (OTS1);UB-LIKE PROTEASE 1D (ULP1D)"]
["AT1G25350","black","glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS;(source:Araport11)","OVULE ABORTION 9 (OVA9)","OVULE ABORTION 9 (OVA9)"]
["AT5G06260","black","TLD-domain containing nucleolar protein;(source:Araport11)","OXIDATION RESISTANCE 3 (OXR3)","OXIDATION RESISTANCE 3 (OXR3)"]
["AT2G41900","black","AtOXS2 specifcally entered the nuclear under salt stress. Te specifc nuclear localization of AtOXS2 could play a role in salt tolerance at the molecular level. Tese results implied that AtOXS2 might target some downstream cis-elements which are required for salt stress responses","OXIDATIVE STRESS 2 (OXS2)","OXIDATIVE STRESS 2 (OXS2);TANDEM ZINC FINGER PROTEIN 7 (TZF7); (DEG9); (ATC3H30)"]
["AT3G29370","black","Encodes a atypical member of the bHLH (basic helix-loop-helix) family transcriptional factors.","P1R3 (P1R3)","P1R3 (P1R3)"]
["AT1G60440","black","The gene AT1G60440 encodes pantothenate kinase 1. Its molecular function was shown to phosphorylate pantothenate to form 4?-phosphopantothenate.","PANTOTHENATE KINASE 1 (PANK1)","PANTOTHENATE KINASE 1 (PANK1);PANTOTHENATE KINASE 1 (ATPANK1); (ATCOAA)"]
["AT5G10480","black","Protein tyrosine phosphatase-like involved in cell division and differentiation. Interacts with CDKA;1 only in its phosphorylated form, preventing dephosphorylation. Overexpression slowed down cell division in suspension cell cultures at the G2-to-M transition and early mitosis and inhibited Arabidopsis seedling growth. Localized in the cytoplasm of dividing cells but moved into the nucleus upon cell differentiation. Based on complementation of yeast mutant PAS2 has acyl-CoA dehydratase activity. It interacts with CER10, a component of the microsomal fatty acid elongase complex, suggesting a role in synthesis of VLCFAs (very long chain fatty acids).","PASTICCINO 2 (PAS2)","PASTICCINO 2 (PAS2); (PEPINO)"]
["AT2G28590","black","Interacts with MBD3; expressed in pollen.","PBS1-LIKE 6 (PBL6)","PBS1-LIKE 6 (PBL6)"]
["AT5G56460","black","Protein kinase superfamily protein;(source:Araport11)","PBS1-LIKE16 (PBL16)","PBS1-LIKE16 (PBL16)"]
["AT2G47470","black","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response. The mRNA is cell-to-cell mobile.","UNFERTILIZED EMBRYO SAC 5 (UNE5)","PDI-LIKE 2-1 (ATPDIL2-1);PROTEIN DISULFIDE ISOMERASE 11 (PDI11);ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 11 (ATPDI11);UNFERTILIZED EMBRYO SAC 5 (UNE5);MATERNAL EFFECT EMBRYO ARREST 30 (MEE30)"]
["AT1G04980","black","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.","PDI-LIKE 2-2 (PDIL2-2)","PDI-LIKE 2-2 (ATPDIL2-2);ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 10 (ATPDI10);PROTEIN DISULFIDE ISOMERASE (PDI10);PDI-LIKE 2-2 (PDIL2-2)"]
["AT2G32920","black","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response.","PDI-LIKE 2-3 (PDIL2-3)","PDI-LIKE 2-3 (ATPDIL2-3);PROTEIN DISULFIDE ISOMERASE 9 (PDI9);ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 9 (ATPDI9);PDI-LIKE 2-3 (PDIL2-3)"]
["AT3G05910","black","Pectinacetylesterase family protein;(source:Araport11)","PECTIN ACETYESTERASE 12 (ATPAE12)","PECTIN ACETYESTERASE 12 (ATPAE12)"]
["AT2G46930","black","Encodes a pectin acetylesterase that removes cell wall acetate associated with pectin formation in Arabidopsis leaves.","PECTIN ACETYLESTERASE 3 (PAE3)","PECTIN ACETYLESTERASE 3 (PAE3)"]
["AT4G19410","black","Pectinacetylesterase family protein;(source:Araport11)","PECTIN ACETYLESTERASE 7 (PAE7)","PECTIN ACETYLESTERASE 7 (PAE7);PECTIN ACETYESTERASE 7 (ATPAE7)"]
["AT3G11820","black","Encodes a syntaxin localized at the plasma membrane. SYR1/PEN1 is a member of the SNARE superfamily and functions in positioning anchoring of the KAT1 K+ channel protein at the plasma membrane. Transcription is upregulated by abscisic acid, suggesting a role in ABA signaling. Also functions in non-host resistance against barley powdery mildew. It is a nonessential component of the preinvasive resistance against Colletotrichum fungus. Required for mlo resistance. The syp121 point mutation results in stomatal phenotypes that reduce CO2 assimilation, slow vegetative growth and increase water use efficiency in the whole plant, conditional upon high light intensities and low relative humidity. The R20R21 motif of SYP121 are essential for SEC11 interaction. Mutation of the R20R21 motif blocks vesicle traffic without uncoupling the effects of SYP121 on solute and K+ uptake associated with the F9xRF motif; the mutation also mimicks the effects on traffic block observed on coexpression of the dominant negative SEC11?149 fragment.","SYNTAXIN OF PLANTS 121 (SYP121)","PENETRATION1 (PEN1);SYNTAXIN RELATED PROTEIN 1 (ATSYR1);SYNTAXIN RELATED PROTEIN 1 (SYR1); (ATSYP121); (AT-SYR1);SYNTAXIN OF PLANTS 121 (SYP121)"]
["AT3G16710","black","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)","PENTATRICOPEPTIDE REPEAT 4 (PPR4)","PENTATRICOPEPTIDE REPEAT 4 (PPR4)"]
["AT5G07460","black","ubiquitous enzyme that repairs oxidatively damaged proteins. Methionine sulfoxide reductase activity. Mutant lacking reductase activity showed increased protein oxidation, nitration and glycation of specific amino acid residues during darkness.","PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2 (PMSR2)","PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2 (PMSR2);ARABIDOPSIS THALIANA METHIONINE SULFOXIDE REDUCTASE 2 (ATMSRA2); (MRSA2)"]
["AT5G25760","black","mutant displays sucrose-dependent seedling development and reduced lateral root production. PEX4 interacts with PEX22 in a yeast two-hybrid. Necessary for peroxisome biogenesis. The PEX4 and PEX22 pair may be important during the remodeling of peroxisome matrix contents as glyoxysomes transition to leaf peroxisomes.","PEROXIN4 (PEX4)","PEROXIN4 (PEX4); (APEM7);UBIQUITIN-CONJUGATING ENZYME 21 (UBC21)"]
["AT2G37040","black","Encodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).","PHE AMMONIA LYASE 1 (pal1)","PHE AMMONIA LYASE 1 (pal1); (ATPAL1)"]
["AT5G61480","black","Encodes PXY, a receptor-like kinase essential for maintaining polarity during plant vascular-tissue development.","PHLOEM INTERCALATED WITH XYLEM (PXY)","PHLOEM INTERCALATED WITH XYLEM (PXY);TDIF RECEPTOR (TDR)"]
["AT1G10150","black","Carbohydrate-binding protein;(source:Araport11)",null,"PHLOEM PROTEIN 2-A10 (AtPP2-A10)"]
["AT3G50960","black","Encodes a protein that functions in microtubule assembly. PLP3a can bind to several different tubulin family members in Y2H assays. Plants with reduced levels of both PLP3a and PLP3b (At5g66410) show defects in cytokinesis, cortical microtubule array formation, oriented cell growth, and maintenance of proper ploidy.","PHOSDUCIN-LIKE PROTEIN 3 HOMOLOG (PLP3a)","PHOSDUCIN-LIKE PROTEIN 3 HOMOLOG (PLP3a)"]
["AT3G47420","black","Encodes a Pi starvation-responsive protein AtPS3. A member of the phosphate starvation-induced glycerol-3-phosphate permease gene family: AT3G47420(G3Pp1), AT4G25220(G3Pp2), AT1G30560(G3Pp3), AT4G17550(G3Pp4) and AT2G13100(G3Pp5). Its expression is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots.","GLYCEROL-3-PHOSPHATE PERMEASE 1 (G3Pp1)","PHOSPHATE STARVATION-INDUCED GENE 3 (ATPS3);PHOSPHATE STARVATION-INDUCED GENE 3 (PS3);GLYCEROL-3-PHOSPHATE PERMEASE 1 (AtG3Pp1);GLYCEROL-3-PHOSPHATE PERMEASE 1 (G3Pp1)"]
["AT3G09920","black","Phosphatidylinositol 4-phosphate 5-kinase (PIP5K) family member. Family members are key enzymes in the process of phosphatidylinositol signaling pathway and have essential functions in growth, development, and biotic and abiotic stresses responses in plants","PHOSPHATIDYL INOSITOL MONOPHOSPHATE 5 KINASE (PIP5K9)","PHOSPHATIDYL INOSITOL MONOPHOSPHATE 5 KINASE (PIP5K9)"]
["AT1G70730","black","Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development.","PHOSPHOGLUCOMUTASE 2 (PGM2)","PHOSPHOGLUCOMUTASE 2 (PGM2)"]
["AT4G00240","black","member of C2-PLD subfamily","PHOSPHOLIPASE D BETA 2 (PLDBETA2)","PHOSPHOLIPASE D BETA 2 (PLDBETA2)"]
["AT4G11850","black","Encodes a phospholipase D (gamma) that is involved in aluminum tolerance and plays a role in membrane lipid modulation under Al stress.","PHOSPHOLIPASE D GAMMA 1 (PLDGAMMA1)","PHOSPHOLIPASE D GAMMA 1 (PLDGAMMA1);MATERNAL EFFECT EMBRYO ARREST 54 (MEE54)"]
["AT4G11840","black","member of C2-PLD subfamily","PHOSPHOLIPASE D GAMMA 3 (PLDGAMMA3)","PHOSPHOLIPASE D GAMMA 3 (PLDGAMMA3)"]
["AT4G35110","black","phospholipase-like protein (PEARLI 4) family protein;(source:Araport11)","PHOSPHOLIPASE-LIKE PROTEIN 4 (PEARLI 4)","PHOSPHOLIPASE-LIKE PROTEIN 4 (PEARLI 4)"]
["AT1G80860","black","Encodes a single-copy phospholipid N-methyltransferase, involved in phosphatidylcholine biosynthesis. Has specific activity towards phosphatidylmonomethylethanolamine and phosphatidyldimethylethanolamine, but not phosphatidylethanolamine.","PHOSPHOLIPID N-METHYLTRANSFERASE (PLMT)","PHOSPHOLIPID N-METHYLTRANSFERASE (PLMT);ARABIDOPSIS PHOSPHOLIPID N-METHYLTRANSFERASE (ATPLMT)"]
["AT3G11470","black","Encodes one of three splice variants. Differs in having YQ in positions 88 and 89. The protein is localized to the mitochondria where it phosphopantetheinylates the mature apo mtACP isoforms. It is an essential gene as homozygous mutants cannot be recovered (embryo lethal).P isoforms. It is an essential gene as homozygous mutants cannot be recovered (embryo lethal).","PHOSPHOPANTETHEINYL TRANSFERASE (PPT)","PHOSPHOPANTETHEINYL TRANSFERASE (PPT)"]
["AT2G38670","black","Encodes a mitochondrial ethanolamine-phosphate cytidylyltransferase, involved in phosphatidylethanolamine (PE) biosynthesis and the regulation of stomatal movement.","PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE 1 (PECT1)","PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE 1 (PECT1)"]
["AT5G36290","black","Member of the UPF0016 family of membrane proteins, belongs to the conserved group of Mn/Ca transporters.","PHOTOSYNTHESIS-AFFECTED MUTANT 71 LIKE 3 (PML3)","PHOTOSYNTHESIS-AFFECTED MUTANT 71 LIKE 3 (PML3);BIVALENT CATION TRANSPORTER 3 (BICAT3)"]
["ATCG00680","black","encodes for CP47, subunit of the photosystem II reaction center.","PHOTOSYSTEM II REACTION CENTER PROTEIN B (PSBB)","PHOTOSYSTEM II REACTION CENTER PROTEIN B (PSBB)"]
["ATCG00280","black","chloroplast gene encoding a CP43 subunit of the photosystem II reaction center. promoter contains a blue-light responsive element.","PHOTOSYSTEM II REACTION CENTER PROTEIN C (PSBC)","PHOTOSYSTEM II REACTION CENTER PROTEIN C (PSBC)"]
["AT4G28660","black","Similar to PsbW subunit of photosystem II.","PHOTOSYSTEM II REACTION CENTER PSB28 PROTEIN (PSB28)","PHOTOSYSTEM II REACTION CENTER PSB28 PROTEIN (PSB28)"]
["AT5G48150","black","Member of GRAS gene family. Semi-dominant mutant has a reduced response to far-red light and appears to act early in the phytochrome A signaling pathway.","PHYTOCHROME A SIGNAL TRANSDUCTION 1 (PAT1)","PHYTOCHROME A SIGNAL TRANSDUCTION 1 (PAT1)"]
["AT4G14210","black","Encodes phytoene desaturase (phytoene dehydrogenase), an enzyme that catalyzes the desaturation of phytoene to zeta-carotene during carotenoid biosynthesis. Processed protein is localized to the plastid.","PHYTOENE DESATURASE 3 (PDS3)","PHYTOENE DESATURASE 3 (PDS3);PHYTOENE DESATURASE (PDS);PIGMENT DEFECTIVE 226 (PDE226)"]
["AT3G44735","black","Phytosulfokine 3 precursor, coding for a unique plant peptide growth factor.","PHYTOSULFOKINE 3 PRECURSOR (PSK3)","PHYTOSULFOKINE 3 PRECURSOR (ATPSK3); (PSK1);PHYTOSULFOKINE 3 PRECURSOR (PSK3)"]
["AT1G05320","black","myosin heavy chain, embryonic smooth protein;(source:Araport11)","PICC-LIKE (PICL)","PICC-LIKE (PICL)"]
["AT1G76620","black","Serine/Threonine-kinase, putative (Protein of unknown function, DUF547);(source:Araport11)","PIGMENT DEFECTIVE EMBRYO 339 (PDE339)","PIGMENT DEFECTIVE EMBRYO 339 (PDE339)"]
["AT1G73590","black","Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins.","PIN-FORMED 1 (PIN1)","PIN-FORMED 1 (PIN1);ARABIDOPSIS THALIANA PIN-FORMED 1 (ATPIN1)"]
["AT5G43810","black","Encodes Argonaute10, a member of the EIF2C (elongation initiation factor 2c)/ Argonaute class of proteins. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes, controls the relative organization of central zone and peripheral zone cells in meristems. Acts in embryonic provascular tissue potentiating WUSCHEL function during meristem development in the embryo. AGO10 specifically sequesters miR166/165 to regulate shoot apical meristem development.","ARGONAUTE 10 (AGO10)","PINHEAD (PNH);ARGONAUTE PROTEIN 10 (AGO10);ZWILLE (ZLL);ARGONAUTE 10 (AGO10)"]
["AT2G34650","black","Encodes a protein serine/threonine kinase that may act as a positive regulator of cellular auxin efflux, as a a binary switch for PIN polarity, and as a negative regulator of auxin signaling. Recessive mutants exhibit similar phenotypes as pin-formed mutants in flowers and inflorescence but distinct phenotypes in cotyledons and leaves. Expressed in the vascular tissue proximal to root and shoot meristems, shoot apex, and embryos. Expression is induced by auxin. Overexpression of the gene results in phenotypes in the root and shoot similar to those found in auxin-insensitive mutants. The protein physically interacts with TCH3 (TOUCH3) and PID-BINDING PROTEIN 1 (PBP1), a previously uncharacterized protein containing putative EF-hand calcium-binding motifs. Acts together with ENP (ENHANCER OF PINOID) to instruct precursor cells to elaborate cotyledons in the transition stage embryo. Interacts with PDK1. PID autophosphorylation is required for the ability of PID to phosphorylate an exogenous substrate. PID activation loop is required for PDK1-dependent PID phosphorylation and requires the PIF domain. Negative regulator of root hair growth. PID kinase activity is critical for the inhibition of root hair growth and for maintaining the proper subcellular localization of PID.","PINOID (PID)","PINOID (PID);ABRUPTUS (ABR)"]
["AT2G26700","black","Member of AGC VIIIa Kinase gene family. Encodes PID2, a homolog of PID. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons.","PINOID2 (PID2)","PINOID2 (PID2);AGC VIIIA KINASE 1-10 (AGC1-10)"]
["AT5G15120","black","2-aminoethanethiol dioxygenase, putative (DUF1637);(source:Araport11)","PLANT CYSTEINE OXIDASE 1 (PCO1)","PLANT CYSTEINE OXIDASE 1 (PCO1);HYPOXIA RESPONSE UNKNOWN PROTEIN 29 (HUP29)"]
["AT2G42670","black","Plant Cysteine Oxidase (PCO). Involved in controlling the stability of Group VII ethylene response factors (ERF-VIIs) via N-Arg/degron pathway through catalyzing the oxidation of their N-Cys for subsequent Arginyl-tRNA--protein transferase 1 (ATE1) mediated arginine installation.","PLANT CYSTEINE OXIDASE 4 (PCO4)","PLANT CYSTEINE OXIDASE 4 (PCO4)"]
["AT2G28830","black","Encodes a U-box E3 ubiquitin ligase involved in ubiquitination of pattern recognition receptor FLS2.pub12/pub13 double mutants enhanced chitin-induced ROS production and callose deposition suggesting they function redundantly to negatively regulate immune response to fungal elicitor.","PLANT U-BOX 12 (PUB12)","PLANT U-BOX 12 (PUB12); (AtPUB12)"]
["AT3G47820","black","Plant U-box type E3 ubiquitin ligase (PUB).","PLANT U-BOX 39 (PUB39)","PLANT U-BOX 39 (PUB39)"]
["AT3G25860","black","Encodes the dihydrolipoamide S-acetyltransferase subunit of the plastid Pyruvate Dehydrogenase Complex (E2). Mutant has embryo defect.","(LTA2)","PLASTID E2 SUBUNIT OF PYRUVATE DECARBOXYLASE (PLE2); (LTA2)"]
["AT5G38150","black","Involved in chloroplast avoidance movement under high-light intensities","PLASTID MOVEMENT IMPAIRED 15 (PMI15)","PLASTID MOVEMENT IMPAIRED 15 (PMI15)"]
["AT1G66840","black","Encodes a coiled-coil protein WEB2 (weak chloroplast movement under blue light 2, also named PMI2/plastid movement impaired 2). Involved in chloroplast avoidance movement under intermediate and high light intensities. WEB2, together with another coiled-coil protein WEB1 (AT2G26570), maintains the chloroplast photorelocation movement velocity.","PLASTID MOVEMENT IMPAIRED 2 (PMI2)","PLASTID MOVEMENT IMPAIRED 2 (PMI2);WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 2 (WEB2)"]
["AT5G26160","black","light-independent protochlorophyllide reductase subunit;(source:Araport11)","PLASTID MOVEMENT IMPAIRED1-RELATED2 (PMIR2)","PLASTID MOVEMENT IMPAIRED1-RELATED2 (PMIR2)"]
["AT3G22960","black","encodes a chloroplast pyruvate kinase alpha subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mRNA is cell-to-cell mobile.","(PKP-ALPHA)","PLASTIDIAL PYRUVATE KINASE 1 (PKP1); (PKP-ALPHA)"]
["AT4G39730","black","PLAT1 domain stress protein family member. Involved in mediating response to stresses such as pathogen infection. It is found in endoplasmic reticulum bodies. PLAT1 is induced by pathogenic fungi and induces the production of scopolin.","PLAT DOMAIN PROTEIN 1 (PLAT1)","PLAT DOMAIN PROTEIN 1 (PLAT1);POLYCYSTIN, LIPOXYGENASE, ALPHA-TOXIN AND TRIACYLGLYCEROL LIPASE 1 (ATPLAT1)"]
["AT3G20840","black","Encodes a member of the AINTEGUMENTA-like (AIL) subclass of the AP2/EREBP family of transcription factors and is essential for quiescent center (QC) specification and stem cell activity. It is a key effector for establishment of the stem cell niche during embryonic pattern formation. It is transcribed in response to auxin accumulation and is dependent on auxin response transcription factors.","PLETHORA 1 (PLT1)","PLETHORA 1 (PLT1);PLETHORA 1 (ATPLT1)"]
["AT1G71270","black","Encodes a homolog of the yeast Vps52p/SAC2. Involved in pollen tube germination and growth. Located in multiple endomembrane organelles including the golgi. The yeast protein has been shown to be located at the late Golgi and to function in a complex involved in retrograde trafficking of vesicles between the early endosomal compartment and the trans-Golgi network.","POKY POLLEN TUBE (POK)","POKY POLLEN TUBE (POK);T-DNA TRANSMISSION DEFECT 8 (TTD8);ARABIDOPSIS THALIANA VPS52 HOMOLOG (ATVPS52); (VPS52)"]
["AT1G07630","black","Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves.","POL-LIKE 5 (PLL5)","POL-LIKE 5 (PLL5)"]
["AT2G46920","black","Pol mutations are recessive, partial suppressors of meristem defects in strong clv1 and clv3 mutants, and nearly complete suppressors of weak clv1 mutants. Single mutants appear normal. Acts downstream of the CLV signaling pathway in meristem development and is required together with PLL1 for stem-cell maintenance through the regulation of WUS.","POLTERGEIST (POL)","POLTERGEIST (POL)"]
["AT2G36660","black","polyadenylate-binding protein, putative / PABP, putative. Member of the class III family of PABP proteins.","POLY(A) BINDING PROTEIN 7 (PAB7)","POLY(A) BINDING PROTEIN 7 (PAB7)"]
["AT4G02390","black","Encodes a DNA dependent nuclear poly (ADP-ribose) polymerase (E.C.2.4.2.30), thought to be involved in post-translational modification .","POLY(ADP-RIBOSE) POLYMERASE 2 (PARP2)","POLY(ADP-RIBOSE) POLYMERASE (APP);POLY(ADP-RIBOSE) POLYMERASE 2 (PARP2);POLY(ADP-RIBOSE) POLYMERASE 1 (PARP1); (ATPARP1);POLY(ADP-RIBOSE) POLYMERASE (PP)"]
["AT2G31320","black","Encodes a poly(ADP-ribose) polymerase.","POLY(ADP-RIBOSE) POLYMERASE 1 (PARP1)","POLY(ADP-RIBOSE) POLYMERASE 2 (PARP2); (ATPARP2);POLY(ADP-RIBOSE) POLYMERASE 1 (PARP1)"]
["AT3G59050","black","Encodes a polyamine oxidase.","POLYAMINE OXIDASE 3 (PAO3)","POLYAMINE OXIDASE 3 (ATPAO3);POLYAMINE OXIDASE 3 (PAO3)"]
["AT1G65840","black","encodes a peroxisomal polyamine oxidase, involved in the back-conversion polyamine degradation pathway. Among the five polyamine oxidases in the Arabidopsis genome, PAO4 is the major isoform in root peroxisomes. The mRNA is cell-to-cell mobile.","POLYAMINE OXIDASE 4 (PAO4)","POLYAMINE OXIDASE 4 (ATPAO4);POLYAMINE OXIDASE 4 (PAO4)"]
["AT3G19553","black","Encodes POLYAMINE UPTAKE TRANSPORTER 5, an amino acid permease family protein.","POLYAMINE UPTAKE TRANSPORTER 5 (PUT5)","POLYAMINE UPTAKE TRANSPORTER 5 (PUT5)"]
["AT1G19170","black","Pectin lyase-like superfamily protein;(source:Araport11)","POLYGALACTURONASE CLADE F 1 (PGF1)","POLYGALACTURONASE CLADE F 1 (PGF1)"]
["AT3G62110","black","Putative membrane-bound polygalacturonase from clade F carrying probable hydrophobic transmembrane regions and N-terminal cytoplasmic tail with 3 or more amino acid residues.","POLYGALACTURONASE CLADE F 10 (PGF10)","POLYGALACTURONASE CLADE F 10 (PGF10); (PLY)"]
["AT5G41870","black","Pectin lyase-like superfamily protein;(source:Araport11)","POLYGALACTURONASE CLADE F 15 (PGF15)","POLYGALACTURONASE CLADE F 15 (PGF15)"]
["AT1G05850","black","Encodes an endo chitinase-like protein AtCTL1. Essential for tolerance to heat, salt and drought stresses. Also involved in root hair development, cell expansion and response to cytokinin. Allelic to erh2. 11 alleles described in Hauser (1995). Mutant is defective in acquired thermotolerance, appears semidwarf throughout its life cycle and has extra lateral branches. There are two EMS alleles. Expression of AtHSP101 is not affected in the mutants.","POM-POM1 (POM1)","POM-POM1 (POM1);ECTOPIC ROOT HAIR 1 (ERH1);ECTOPIC ROOT HAIR 2 (ERH2);ECTOPIC DEPOSITION OF LIGNIN IN PITH 1 (ELP1); (ERH1);ECTOPIC DEPOSITION OF LIGNIN IN PITH (ELP);SENSITIVE TO HOT TEMPERATURES 2 (HOT2); (ATCTL1);CHITINASE-LIKE PROTEIN 1 (CTL1)"]
["AT2G31370","black","Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11)","POSF21 (POSF21)","POSF21 (POSF21); (BZIP59); (ATBZIP59)"]
["AT2G40540","black","putative potassium transporter AtKT2p (AtKT2) mRNA,","POTASSIUM TRANSPORTER 2 (KT2)","POTASSIUM TRANSPORTER 2 (KT2); (ATKT2); (SHY3); (KUP2); (ATKUP2); (TRK2)"]
["AT5G14880","black","Potassium transporter family protein;(source:Araport11)","POTASSIUM UPTAKE 8 (KUP8)","POTASSIUM UPTAKE 8 (KUP8)"]
["AT4G21210","black","Encodes a PPDK regulatory protein that has both protein kinase and protein phosphatase activities towards PPDK (pyruvate orthophosphate dikinase).","PPDK REGULATORY PROTEIN (RP1)","PPDK REGULATORY PROTEIN (ATRP1);PPDK REGULATORY PROTEIN (RP1)"]
["AT2G38360","black","prenylated RAB acceptor 1.B4;(source:Araport11)","PRENYLATED RAB ACCEPTOR 1.B4 (PRA1.B4)","PRENYLATED RAB ACCEPTOR 1.B4 (PRA1.B4)"]
["AT1G08770","black","prenylated RAB acceptor 1.E;(source:Araport11)","PRENYLATED RAB ACCEPTOR 1.E (PRA1.E)","PRENYLATED RAB ACCEPTOR 1.E (PRA1.E)"]
["AT4G33500","black","Protein phosphatase 2C family protein. Loss of function enhances immunity to bacterial pathogens.","PROBABLE PROTEIN PHOSPHATASE (PP2C62)","PROBABLE PROTEIN PHOSPHATASE (PP2C62)"]
["AT2G19760","black","first member of the Arabidopsis profilin multigene family, expressed in all organs of Arabidopsis. Binds poly-L-proline. The first intron of PRF1 enhances gene expression in vegetative tissues.","PROFILIN 1 (PRF1)","PROFILIN 1 (PFN1);PROFILIN 1 (PRF1)"]
["AT1G26150","black","Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807).","PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 10 (PERK10)","PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 10 (AtPERK10);PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 10 (PERK10)"]
["AT5G66140","black","Encodes alpha5 subunit of 20S proteosome complex involved in protein degradation.","PROTEASOME ALPHA SUBUNIT D2 (PAD2)","PROTEASOME ALPHA SUBUNIT D2 (PAD2)"]
["AT4G22750","black","Encodes a protein S-acyltransferase that, together with PAT14, cooperatively regulates leaf senescence. PAT13- and PAT16-mediated S-acylation of R5L1 is crucial for its membrane localization to activate the plant defense response.","PROTEIN ACYLTRANSFERASE 13 (PAT13)","PROTEIN ACYLTRANSFERASE 13 (PAT13)"]
["AT3G20560","black","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin).","PDI-LIKE 5-3 (PDIL5-3)","PROTEIN DISULFIDE ISOMERASE 12 (PDI12);ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 12 (ATPDI12);PDI-LIKE 5-3 (PDIL5-3);PDI-LIKE 5-3 (ATPDIL5-3)"]
["AT1G77510","black","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). AtIRE1-2 does not appear to be required for this response, but the atbzip60 mutant has a diminished response. This protein has been shown to be an attenuator of D1 synthesis, modulating photoinhibition in a light-regulated manner.","PDI-LIKE 1-2 (PDIL1-2)","PROTEIN DISULFIDE ISOMERASE 6 (ATPDI6);PDI-LIKE 1-2 (PDIL1-2);PROTEIN DISULFIDE ISOMERASE 6 (PDI6);PDI-LIKE 1-2 (ATPDIL1-2)"]
["AT4G34090","black","cyclin delta-3;(source:Araport11)","PROTEIN IN CHLOROPLAST ATPASE BIOGENESIS (PAB)","PROTEIN IN CHLOROPLAST ATPASE BIOGENESIS (PAB)"]
["AT2G44830","black","AGCVIII kinase involved in the pulse-induced first positive phototropism. Plasma-membrane-associated element of a molecular rheostat that modulates auxin flux through developing protophloem sieve elements (PPSEs) while interacting with BRX, thereby timing PPSE differentiation. Activates PIN-mediated auxin efflux.","PROTEIN KINASE ASSOCIATED WITH BRX (PAX)","PROTEIN KINASE ASSOCIATED WITH BRX (PAX);AGC VIIIA KINASE 1-3 (AGC1-3)"]
["AT5G19680","black","PP1 Regulatory Subunit3. Interacts with members of the Type One Protein Phosphatases (TOPP) family.Facilitates the nuclear localization of TOPP4 which is required for its activity in mediating ABA responses.","PROTEIN PHOSPATASE 1 REGULATORY SUBUNIT 3 (PP1R3)","PROTEIN PHOSPATASE 1 REGULATORY SUBUNIT 3 (PP1R3)"]
["AT2G42500","black","Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4]. ACR4 phosphorylates the PROTEIN PHOSPHATASE 2A-3 (PP2A-3) catalytic subunit of the PP2A phosphatase holoenzyme and PP2A dephosphorylates ACR4.","PROTEIN PHOSPHATASE 2A-3 (PP2A-3)","PROTEIN PHOSPHATASE 2A-3 (PP2A-3);PROTEIN PHOSPHATASE 2A-4 (PP2A-4)"]
["AT3G51390","black","DHHC-type zinc finger family protein;(source:Araport11)","PROTEIN S-ACYL TRANSFERASE 10 (PAT10)","PROTEIN S-ACYL TRANSFERASE 10 (PAT10); (ATPAT10)"]
["AT2G33640","black","DHHC-type zinc finger family protein that encodes a functional s-acyl transferase.","PROTEIN S-ACYL TRANSFERASE 21 (PAT21)","PROTEIN S-ACYL TRANSFERASE 21 (PAT21)"]
["AT2G42840","black","Encodes a putative extracellular proline-rich protein is exclusively expressed in the L1 layer of vegetative, inflorescence and floral meristems and the protoderm of organ primordia.","PROTODERMAL FACTOR 1 (PDF1)","PROTODERMAL FACTOR 1 (PDF1)"]
["AT4G04890","black","Encodes a homeodomain protein that is expressed in the LI layer of the vegetative, floral and inflorescence meristems. Binds to the L1 box promoter element which is required in some proteins for L1 specific expression.","PROTODERMAL FACTOR 2 (PDF2)","PROTODERMAL FACTOR 2 (PDF2)"]
["AT5G06970","black","PATROL1 is a Munc13-like protein involved in mediating H[+]-ATPase translocation. It interacts with AHA1and is responsible for its translocation during stomatal movement.","PROTON ATPASE TRANSLOCATION CONTROL 1 (PATROL1)","PROTON ATPASE TRANSLOCATION CONTROL 1 (PATROL1)"]
["AT4G18020","black","Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9).","(APRR2)","PSEUDO-RESPONSE REGULATOR 2 (PRR2); (APRR2)"]
["AT1G44750","black","Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.","PURINE PERMEASE 11 (PUP11)","PURINE PERMEASE 11 (ATPUP11);PURINE PERMEASE 11 (PUP11)"]
["AT2G32080","black","similar to the conserved animal nuclear protein PUR alpha which was implicated in the control of gene transcription and DNA replication","PURIN-RICH ALPHA 1 (PUR ALPHA-1)","PURIN-RICH ALPHA 1 (PUR ALPHA-1)"]
["AT3G20500","black","purple acid phosphatase 18;(source:Araport11)","PURPLE ACID PHOSPHATASE 18 (PAP18)","PURPLE ACID PHOSPHATASE 18 (ATPAP18);PURPLE ACID PHOSPHATASE 18 (PAP18)"]
["AT1G13900","black","Encodes a dual-localized acid phosphatase (mitochondria and chloroplast) that modulates carbon metabolism.","PURPLE ACID PHOSPHATASE 2 (PAP2)","PURPLE ACID PHOSPHATASE 2 (PAP2)"]
["AT5G57140","black","purple acid phosphatase 28;(source:Araport11)","PURPLE ACID PHOSPHATASE 28 (PAP28)","PURPLE ACID PHOSPHATASE 28 (PAP28);PURPLE ACID PHOSPHATASE 28 (ATPAP28)"]
["AT1G62290","black","Saposin-like aspartyl protease family protein;(source:Araport11)","PUTATIVE ASPARTIC PROTEINASE A2 (PASPA2)","PUTATIVE ASPARTIC PROTEINASE A2 (PASPA2);SUPPRESSOR OF UBK48R-INDUCED CELL DEATH 7 (SUD7);PUTATIVE ASPARTIC PROTEINASE A2 (ATPASPA2)"]
["AT3G24160","black","Encodes a putative Type 1 membrane protein (PMP).","PUTATIVE TYPE 1 MEMBRANE PROTEIN (PMP)","PUTATIVE TYPE 1 MEMBRANE PROTEIN (PMP)"]
["AT1G08590","black","Encodes one of the two putative eLRR kinase closely related to PXY (At1g08590/PXL1 and At4g28650/PXL2). Insertion mutants in either pxl1 or pxl2 do not exhibit an obvious phenotype in the stem; double-mutant combinations of a Col allele, of pxy (pxy-3) with pxl1 and pxl2, generate a more severe vascular phenotype than pxy-3 alone, suggesting that these genes act synergistically with PXY in regulating vascular-tissue development in the stem.","PXY-LIKE1 (PXL1)","PXY-LIKE1 (PXL1);PHLOEM INTERCALATED WITH XYLEM-LIKE 1 (ATPXL1)"]
["AT2G38310","black","Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2. The mRNA is cell-to-cell mobile.","PYR1-LIKE 4 (PYL4)","PYR1-LIKE 4 (PYL4);REGULATORY COMPONENTS OF ABA RECEPTOR 10 (RCAR10); (ATPYL4)"]
["AT5G49970","black","encodes the bifunctional pyridoxine (pyridoxamine) 5?-phosphate oxidase (PPOX)(EC 1.4.3.5) that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group). NAD(P)HX epimerase (AT5G49970) interconverts the two epimers of NAD(P)HX.","PYRIDOXIN (PYRODOXAMINE) 5'-PHOSPHATE OXIDASE (PPOX)","PYRIDOXIN (PYRODOXAMINE) 5'-PHOSPHATE OXIDASE (ATPPOX);PYRIDOXIN (PYRODOXAMINE) 5'-PHOSPHATE OXIDASE (PPOX);HOMOLOG OF YEAST PYRIDOXINE AUXOTROPHY 3 (PDX3)"]
["AT1G01090","black","pyruvate dehydrogenase E1 alpha subunit","PYRUVATE DEHYDROGENASE E1 ALPHA (PDH-E1 ALPHA)","PYRUVATE DEHYDROGENASE E1 ALPHA (PDH-E1 ALPHA)"]
["AT1G30120","black","Encodes a putative plastid pyruvate dehydrogenase E1 beta subunit that is distinct from the mitochondrial pyruvate dehydrogenase E1 beta subunit.","PYRUVATE DEHYDROGENASE E1 BETA (PDH-E1 BETA)","PYRUVATE DEHYDROGENASE E1 BETA (PDH-E1 BETA)"]
["AT4G00740","black","Encodes a Golgi-localized type II membrane pectin methyltransferase regulating cell wall biosynthesis in suspension cells.","QUASIMODO 3 (QUA3)","QUASIMODO 3 (QUA3)"]
["AT5G22370","black","Encodes QQT1. Required for early embryo development. qqt1 mutant lines are embryo-defective. Participates in the organization of microtubules during cell division. Interacts with QQT2 (encoded by AT4G21800).","QUATRE-QUART 1 (QQT1)","QUATRE-QUART 1 (QQT1);EMBRYO DEFECTIVE 1705 (EMB1705); (GPN2)"]
["AT2G01350","black","At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.","QUINOLINATE PHOSHORIBOSYLTRANSFERASE (QPT)","QUINOLINATE PHOSHORIBOSYLTRANSFERASE (QPT)"]
["AT4G30710","black","QWRF motif protein (DUF566);(source:Araport11)","QWRF DOMAIN CONTAINING 8 (QWRF8)","QWRF DOMAIN CONTAINING 8 (QWRF8);AUGMIN SUBUNIT 8 (AUG8)"]
["AT3G59920","black","RAB GDP DISSOCIATION INHIBITOR 2 The mRNA is cell-to-cell mobile.","RAB GDP DISSOCIATION INHIBITOR 2 (GDI2)","RAB GDP DISSOCIATION INHIBITOR 2 (ATGDI2);RAB GDP DISSOCIATION INHIBITOR 2 (GDI2)"]
["AT1G07410","black","RAB GTPase homolog A2B;(source:Araport11)","RAB GTPASE HOMOLOG A2B (RABA2b)","RAB GTPASE HOMOLOG A2B (ATRABA2B);RAB GTPASE HOMOLOG A2B (RAB-A2B);ARABIDOPSIS RAB GTPASE HOMOLOG A2B (ATRAB-A2B);RAB GTPASE HOMOLOG A2B (RABA2b)"]
["AT5G47520","black","RAB GTPase homolog A5A;(source:Araport11)","RAB GTPASE HOMOLOG A5A (RABA5a)","RAB GTPASE HOMOLOG A5A (RABA5a);RAB GTPASE HOMOLOG A5A (AtRABA5a)"]
["AT3G16100","black","RAB GTPase homolog G3C;(source:Araport11)","RAB GTPASE HOMOLOG G3C (RABG3c)","RAB GTPASE HOMOLOG G3C (ATRABG3C); (ATRAB7D);RAB GTPASE HOMOLOG G3C (RABG3c)"]
["AT4G35950","black","A member of ROP GTPases gene family-like. GTP binding protein Arac6.","RAC-LIKE 6 (RAC6)","RAC-LIKE 6 (ARAC6);RAC-LIKE 2 (RAC2);RHO-RELATED PROTEIN FROM PLANTS 5 (ATROP5); (ATRAC6); (ROP5);RAC-LIKE 6 (RAC6)"]
["AT5G20250","black","encodes a member of glycosyl hydrolase family 36. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell. The mRNA is cell-to-cell mobile.","DARK INDUCIBLE 10 (DIN10)","RAFFINOSE SYNTHASE 6 (RS6);DARK INDUCIBLE 10 (DIN10)"]
["AT4G13950","black","Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.","RALF-LIKE 31 (RALFL31)","RALF-LIKE 31 (RALFL31)"]
["AT4G14010","black","Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.","RALF-LIKE 32 (RALFL32)","RALF-LIKE 32 (RALFL32)"]
["AT5G20010","black","A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression. The mRNA is cell-to-cell mobile.","RAS-RELATED NUCLEAR PROTEIN-1 (RAN-1)","RAS-RELATED NUCLEAR PROTEIN-1 (RAN-1);ARABIDOPSIS THALIANA RAS-RELATED NUCLEAR PROTEIN (ATRAN1);RAS-RELATED NUCLEAR PROTEIN (RAN1)"]
["AT5G08710","black","Regulator of chromosome condensation (RCC1) family protein;(source:Araport11)","RCC1/UVR8/GEF-LIKE 1 (RUG1)","RCC1/UVR8/GEF-LIKE 1 (RUG1)"]
["AT1G28340","black","receptor like protein 4;(source:Araport11)","RECEPTOR LIKE PROTEIN 4 (RLP4)","RECEPTOR LIKE PROTEIN 4 (AtRLP4);RECEPTOR LIKE PROTEIN 4 (RLP4); (LLR2);MALECTIN-LIKE DOMAIN (MLD)- AND LEUCINE-RICH REPEAT (LRR)-CONTAINING PROTEIN 2 (MLLR2)"]
["AT4G18760","black","receptor like protein 51;(source:Araport11)","RECEPTOR LIKE PROTEIN 51 (RLP51)","RECEPTOR LIKE PROTEIN 51 (AtRLP51);RECEPTOR LIKE PROTEIN 51 (RLP51);SUPPRESSOR OF NPR1-1, CONSTITUTIVE 2 (SNC2)"]
["AT1G48480","black","Arabidopsis thaliana receptor-like protein kinase (RKL1) gene","RECEPTOR-LIKE KINASE 1 (RKL1)","RECEPTOR-LIKE KINASE 1 (RKL1)"]
["AT1G29750","black","Receptor-like serine/threonine kinase (RKF1). The putative extracellular domain of the RKF1 protein contains 13 tandem repeats of leucine-rich sequences. Expressed in early flower primordial, stamen, and pollen grains.","RECEPTOR-LIKE KINASE IN FLOWERS 1 (RKF1)","RECEPTOR-LIKE KINASE IN FLOWERS 1 (RKF1)"]
["AT2G47700","black","RING/U-box superfamily protein;(source:Araport11)","RED AND FAR-RED INSENSITIVE 2 (RFI2)","RED AND FAR-RED INSENSITIVE 2 (RFI2)"]
["AT1G11960","black","Calcium channel that is phosphorylated by BIK1 in the presence of PAMPS and required for stomatal immunity.","REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 1.3 (OSCA1.3)","REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 1.3 (OSCA1.3)"]
["AT4G02900","black","ERD (early-responsive to dehydration stress) family protein;(source:Araport11)","REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 1.7 (OSCA1.7)","REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 1.7 (OSCA1.7)"]
["AT1G32090","black","early-responsive to dehydration stress protein (ERD4);(source:Araport11)","REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 1.8 (OSCA1.8)","REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 1.8 (OSCA1.8)"]
["AT3G15820","black","Functions as phosphatidylcholine:diacylglycerol cholinephosphotransferase, a major reaction for the transfer of 18:1 into phosphatidylcholine for desaturation and also for the reverse transfer of 18:2 and 18:3 into the triacylglycerols synthesis pathway","REDUCED OLEATE DESATURATION 1 (ROD1)","REDUCED OLEATE DESATURATION 1 (ROD1)"]
["AT4G16845","black","The VERNALIZATION2 (VRN2) gene mediates vernalization and encodes a nuclear-localized zinc finger protein with similarity to Polycomb group (PcG) proteins of plants and animals. In wild-type Arabidopsis, vernalization results in the stable reduction of the levels of the floral repressor FLC. In vrn2 mutants, FLC expression is downregulated normally in response to vernalization, but instead of remaining low, FLC mRNA levels increase when plants are returned to normal temperatures. VRN2 maintains FLC repression after a cold treatment, serving as a mechanism for the cellular memory of vernalization. Required for complete repression of FLC. Required for the methylation of histone H3","REDUCED VERNALIZATION RESPONSE 2 (VRN2)","REDUCED VERNALIZATION RESPONSE 2 (VRN2)"]
["AT5G46340","black","Encodes a homolog of the protein Cas1p known to be involved in polysaccharide O-acetylation in Cryptococcus neoformans. Has high similarity to RWA2 whose mutant displays reduced acetylation. The protein is expressed in the Golgi and is involved in the acetylation of xylan during secondary wall biosynthesis.","REDUCED WALL ACETYLATION 1 (RWA1)","REDUCED WALL ACETYLATION 1 (RWA1)"]
["AT1G29890","black","Encodes a homolog of the protein Cas1p known to be involved in polysaccharide O-acetylation in Cryptococcus neoformans. Has high similarity to RWA2 whose mutant displays reduced acetylation. The protein is expressed in the Golgi and is involved in the acetylation of xylan during secondary wall biosynthesis.","REDUCED WALL ACETYLATION 4 (RWA4)","REDUCED WALL ACETYLATION 4 (RWA4)"]
["AT3G23590","black","Encodes a protein shown to physically associate with the conserved transcriptional coregulatory complex, Mediator, and is involved in the regulation of phenylpropanoid homeostasis. Acts redundantly with REF4/MED5b (At2g48110). Required for expression of some dark-upregulated genes. RFR1 is the MED5a subunit of the mediator complex.","REF4-RELATED 1 (RFR1)","REF4-RELATED 1 (RFR1); (MED33A); (MED5A)"]
["AT5G56130","black","Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis. Together with RAE3 plays overlapping but distinct roles in the modulation of Al resistance and low Pi response.","(TEX1)","REGULATION OF ATALMT1 EXPRESSION2 (RAE2); (THO3); (TEX1); (AtTEX1)"]
["AT2G35635","black","encodes a ubiquitin-like protein that contains tandem repeats of the ubiquitin coding region, but at least one repeat per gene encodes a protein with amino acid substitutions. The mRNA is cell-to-cell mobile.","UBIQUITIN 7 (UBQ7)","RELATED TO UBIQUITIN 2 (RUB2);UBIQUITIN 7 (UBQ7)"]
["AT1G49480","black","Encodes a nuclear-localized DNA-binding protein that interacts with ITN1 at the PM and nuclei in vivo and may regulate ITN's subcellular localization.","RELATED TO VERNALIZATION1 1 (RTV1)","RELATED TO VERNALIZATION1 1 (RTV1)"]
["AT3G14980","black","IDM1 is a histone H3 acetyltransferase that is capable of recognizing methylated DNA through its MBD domain and recognizing unmethylated histone H3K4 through its PHD domain. It negatively regulates DNA demethylation, preventing DNA hypermethylation of highly homologous multicopy genes and other repetitive sequences.","REPRESSOR OF SILENCING 4 (ROS4)","REPRESSOR OF SILENCING 4 (ROS4);INCREASED DNA METHYLATION 1 (IDM1)"]
["AT3G18960","black","Encodes a member of the REM (Reproductive Meristem) gene family, a part of the B3 DNA-binding domain superfamily. Together with ATHB25 induces the expression of genes controlling shoot stem characteristics by ectopic expression in roots.","REPRODUCTIVE MERISTEM 7 (REM7)","REPRODUCTIVE MERISTEM 7 (REM7)"]
["AT2G47160","black","Encodes a key transporter under boron (B) limitation in the soil. Protein accumulates in shoots and roots under conditions of boron deficiency and is degraded within several hours of restoring boron supply. Localized to the plasma membrane under B limitation, and to the cytoplasm after B application before degradation. Protein is transferred via the endosomes to the vacuole for degradation. Localized to the inner plasma membrane domain in the columella, lateral root cap, epidermis, and endodermis in the root tip region, and in the epidermis and endodermis in the elongation zone. Under high-boron is transported to the vacuole for degradation. Thought to be a B transceptor, directly senses the B concentration and promotes its own polyubiquitination and vacuolar sorting for quick and precise maintenance of B homeostasis.","REQUIRES HIGH BORON 1 (BOR1)","REQUIRES HIGH BORON 1 (BOR1); (AtBOR1)"]
["AT2G44420","black","protein N-terminal asparagine amidohydrolase family protein;(source:Araport11)","RESIDUE-SPECIFIC N-TERMINAL AMIDASE 1 (NTAN1)","RESIDUE-SPECIFIC N-TERMINAL AMIDASE 1 (NTAN1)"]
["AT5G43730","black","Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11)","RESISTANCE SILENCED GENE 2 (RSG2)","RESISTANCE SILENCED GENE 2 (RSG2)"]
["AT5G46470","black","Encodes RPS6 (RESISTANT TO P. SYRINGAE 6), a member of the TIR-NBS-LRR class resistance protein. The mRNA is cell-to-cell mobile.","RESISTANT TO P. SYRINGAE 6 (RPS6)","RESISTANT TO P. SYRINGAE 6 (RPS6)"]
["AT1G64060","black","Interacts with AtrbohD gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site.","RESPIRATORY BURST OXIDASE PROTEIN F (RBOH F)","RESPIRATORY BURST OXIDASE PROTEIN F (ATRBOH F);ARABIDOPSIS THALIANA RESPIRATORY BURST OXIDASE HOMOLOG F (ATRBOHF); (RBOHAP108);RESPIRATORY BURST OXIDASE PROTEIN F (RBOHF);RESPIRATORY BURST OXIDASE PROTEIN F (RBOH F)"]
["AT1G10470","black","Encodes a two-component response regulator. Acts redundantly with ARR3 in the control of circadian period in a cytokinin-independent manner.","RESPONSE REGULATOR 4 (ARR4)","RESPONSE REGULATOR 4 (ARR4);INDUCED BY CYTOKININ 7 (IBC7);RESPONCE REGULATOR 1 (ATRR1);MATERNAL EFFECT EMBRYO ARREST 7 (MEE7)"]
["AT1G69380","black","Encodes a mitochondria-localized protein that is required for cell division in the root meristem.","RETARDED ROOT GROWTH (RRG)","RETARDED ROOT GROWTH (RRG)"]
["AT5G13610","black","Encodes a mitochondria-localized protein involved in ABI4-mediated mitochondrial retrograde signalling.","RETARDED ROOT GROWTH-LIKE (RRL)","RETARDED ROOT GROWTH-LIKE (RRL)"]
["AT5G41600","black","VIRB2-interacting protein 3;(source:Araport11)","VIRB2-INTERACTING PROTEIN 3 (BTI3)","RETICULAN LIKE PROTEIN B4 (RTNLB4);VIRB2-INTERACTING PROTEIN 3 (BTI3)"]
["AT5G58000","black","Encodes a member of the reticulon gene family. Reticulons are integral ER membrane proteins characterised by a reticulon homology domain comprising four transmembrane domains which results in the proteins sitting in the membrane in a W-topology.","RETICULON 21 (RTN21)","RETICULON 21 (RTN21)"]
["AT1G80360","black","Encodes a methionine-specific aminotransferase that uses the ethylene biosynthetic intermediate methionine as an amino donor and the auxin biosynthetic intermediate indole-3-pyruvic acid as an amino acceptor to produce L-tryptophan and 2-oxo-4-methylthiobutyric acid. These actions allow VAS1 to coordinate both auxin and ethylene biosynthesis. It functions downstream of TAA1/SAV3 but upstream of YUCs to negatively modulate IAA biosynthesis directly by altering the 3-IPA pool.","REVERSAL OF SAV3 PHENOTYPE 1 (VAS1)","REVERSAL OF SAV3 PHENOTYPE 1 (VAS1);NDOLE SEVERE SENSITIVE1 (ISS1)"]
["AT5G16510","black","RGP5 is a member of the reversably-glycosylated family of proteins. Analyses using tagged RGP5 suggest that it is present in the cytosol and in association with the Golgi apparatus. Recombinant RGP5 does not have UDP-arabinose mutase activity based on an in vitro assay even though the related RGP1, RGP2, and RGP3 proteins do have activity in the same assay. RGP5 can form complexes with RGP1 and RGP2.","REVERSIBLY GLYCOSYLATED POLYPEPTIDE 5 (RGP5)","REVERSIBLY GLYCOSYLATED PROTEIN 5 (RGP5);REVERSIBLY GLYCOSYLATED POLYPEPTIDE 5 (RGP5)"]
["AT5G60690","black","REVOLUTA regulates meristem initiation at lateral positions. a member of a small homeodomain-leucine zipper family. Has overlapping functions with PHAVOLUTA and PHABULOSA. The mRNA is cell-to-cell mobile.","REVOLUTA (REV)","REVOLUTA (REV);AMPHIVASAL VASCULAR BUNDLE (AVB1); (AVB1);INTERFASCICULAR FIBERLESS 1 (IFL1);INTERFASCICULAR FIBERLESS (IFL)"]
["AT1G14020","black","O-fucosyltransferase family protein;(source:Araport11)","RG-I RHAMNOSYLTRANSFERASE 4 (RRT4)","RG-I RHAMNOSYLTRANSFERASE 4 (RRT4)"]
["AT1G16460","black","encodes a cytoplasmic thiosulfate:cyanide sulfurtransferase, activity of which increased the rhodanese activity of transgenic yeast. Can also act as a mercaptopyruvate sulfurtransferase.","RHODANESE HOMOLOGUE 2 (RDH2)","RHODANESE HOMOLOGUE 2 (ATRDH2);ARABIDOPSIS THALIANA MERCAPTOPYRUVATE SULFURTRANSFERASE 2 (ATMST2);MERCAPTOPYRUVATE SULFURTRANSFERASE 2 (MST2);SULFURTRANSFERASE 2 (ST2);SULFURTRANSFERASE 2 (STR2);RHODANESE HOMOLOGUE 2 (RDH2)"]
["AT2G29050","black","RHOMBOID-like 1;(source:Araport11)","RHOMBOID-LIKE 1 (RBL1)","RHOMBOID-LIKE 1 (RBL1);RHOMBOID-LIKE 1 (ATRBL1)"]
["AT4G21470","black","Bifunctional enzyme that catalyzes hydrolysis of FMN to riboflavin, and phosphorylation of riboflavin to FMN. The mRNA is cell-to-cell mobile.","RIBOFLAVIN KINASE/FMN HYDROLASE (FMN/FHY)","RIBOFLAVIN KINASE/FMN HYDROLASE (ATFMN/FHY);RIBOFLAVIN KINASE/FMN HYDROLASE (FMN/FHY)"]
["AT1G17160","black","RBSK is a plastid localized ribokinase involved in nucleoside metabolism. It is the only member of this gene family in Arabidopsis.","RIBOKINASE (RBSK)","RIBOKINASE (RBSK)"]
["AT1G24240","black","Ribosomal protein L19 family protein;(source:Araport11)","RIBOSOMAL PROTEIN BL19M (BL19M)","RIBOSOMAL PROTEIN BL19M (BL19M)"]
["AT4G21460","black","Ribosomal protein S24/S35;(source:Araport11)","RIBOSOMAL PROTEIN MS35Y (MS35Y)","RIBOSOMAL PROTEIN MS35Y (MS35Y)"]
["AT2G19720","black","ribosomal protein S15A B;(source:Araport11)","RIBOSOMAL PROTEIN S15A B (rps15ab)","RIBOSOMAL PROTEIN S15A B (rps15ab);RIBOSOMAL PROTEIN US8MZ (US8MZ)"]
["AT4G29430","black","ribosomal protein S15A E;(source:Araport11)","RIBOSOMAL PROTEIN S15A E (rps15ae)","RIBOSOMAL PROTEIN S15A E (rps15ae);RIBOSOMAL PROTEIN US8MY (US8MY)"]
["AT1G52370","black","Ribosomal protein L22p/L17e family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL22MZ (UL22MZ)","RIBOSOMAL PROTEIN UL22MZ (UL22MZ)"]
["ATCG01210","black","chloroplast-encoded 16S ribosomal RNA","RIBOSOMAL RNA 16S (RRN16S.2)","RIBOSOMAL RNA 16S (RRN16S.2)"]
["ATCG00920","black","chloroplast-encoded 16S ribosomal RNA","RIBOSOMAL RNA16S (RRN16S.1)","RIBOSOMAL RNA16S (RRN16S.1)"]
["ATCG00950","black","chloroplast-encoded 23S ribosomal RNA","RIBOSOMAL RNA23S (RRN23S.1)","RIBOSOMAL RNA23S (RRN23S.1)"]
["ATCG01180","black","chloroplast-encoded 23S ribosomal RNA","RIBOSOMAL RNA23S (RRN23S.2)","RIBOSOMAL RNA23S (RRN23S.2)"]
["AT3G56580","black","Encodes a functional E3 ubiquitin ligase involved in the dehydration stress response and regulation of proline biosynthesis.","RING ZINC FINGER 1 (RZF1)","RING ZINC FINGER 1 (RZF1); (ATRZF1);BCA2A ZINC FINGER ATL 2 (BTL02)"]
["AT5G14610","black","DEAD box RNA helicase family protein;(source:Araport11)","RNA HELICASE 46 (RH46)","RNA HELICASE 46 (RH46)"]
["AT3G58570","black","Immunoprecipitation with mRNA decapping complex members DCP1 and DCP2.","RNA HELICASE 52 (RH52)","RNA HELICASE 52 (RH52)"]
["AT3G57080","black","Non-catalytic subunit unique to Nuclear DNA-dependent RNA polymerase V; homologous to budding yeast RPB5.","(NRPE5)","RNA POLYMERASE II FIFTH LARGEST SUBUNIT, B (RPB5B); (NRPE5);DEFECTIVE IN MERISTEM SILENCING 12 (DMS12)"]
["AT2G41340","black","NRPE5-like protein of unknown function; homologous to budding yeast RPB5","RNA POLYMERASE II FIFTH LARGEST SUBUNIT, D (RPB5D)","RNA POLYMERASE II FIFTH LARGEST SUBUNIT, D (RPB5D)"]
["AT1G12620","black","Required to generate the nad3-rps12 -141 5&#8242; end in ecotype Van-0, whereas the RPF8 allele in Col has no function in the generation of any 5&#8242; terminus of this transcript.","RNA PROCESSING FACTOR 8 (RPF8)","RNA PROCESSING FACTOR 8 (RPF8)"]
["AT4G03110","black","Encodes a putative RNA-binding protein that is located in the cytoplasm and is involved in the hypersensitive response and positively regulates salicylic acid-mediated immunity.","RNA-BINDING PROTEIN-DEFENSE RELATED 1 (RBP-DR1)","RNA-BINDING PROTEIN-DEFENSE RELATED 1 (AtRBP-DR1);RNA-BINDING PROTEIN-DEFENSE RELATED 1 (RBP-DR1);BRUNO-LIKE 1 (BRN1); (ATBRN1)"]
["AT3G22680","black","Encodes RNA-DIRECTED DNA METHYLATION 1 (RDM1), forming a complex with DMS3 (AT3G49250) and DRD1 (AT2G16390). This complex is termed DDR. The DDR complex is required for polymerase V transcripts and RNA-directed DNA methylation.","RNA-DIRECTED DNA METHYLATION 1 (RDM1)","RNA-DIRECTED DNA METHYLATION 1 (RDM1);DEFECTIVE IN MERISTEM SILENCING 7 (DMS7)"]
["AT1G17140","black","Encodes a ROP/RAC effector, designated interactor of constitutive active ROPs 1 (ICR1), that interacts with GTP-bound ROPs. ICR1 is a scaffold mediating formation of protein complexes that are required for cell polarity. ICR1 is comprised of coiled-coil domains and forms complexes with itself and the exocyst vesicle-tethering complex subunit SEC3.","INTERACTOR OF CONSTITUTIVELY ACTIVE ROP 1 (ICR1)","ROP INTERACTIVE PARTNER 1 (RIP1);INTERACTOR OF CONSTITUTIVELY ACTIVE ROP 1 (ICR1)"]
["AT3G53350","black","Encodes RIP3 (ROP interactive partner 3), a microtubule-binding protein that is anchored to the plasma membrane domains and promotes local microtubule disassembly, forming as specific pattern of secondary walls in xylem vessel cells. Localized at microtubules and interacts with the plant-specific kinesin AtKinesin-13A. Together with ICR2 involved in secondary wall patterning in the xylem and root hair polar growth.","ROP INTERACTIVE PARTNER 3 (RIP3)","ROP INTERACTIVE PARTNER 4 (RIP4);ROP INTERACTIVE PARTNER 3 (RIP3);MICROTUBULE DEPLETION DOMAIN 1 (MIDD1); (ICR5)"]
["AT3G23810","black","S-adenosyl-l-homocysteine (SAH) hydrolase 2;(source:Araport11)","S-ADENOSYL-L-HOMOCYSTEINE (SAH) HYDROLASE 2 (SAHH2)","S-ADENOSYL-L-HOMOCYSTEINE (SAH) HYDROLASE 2 (SAHH2);S-ADENOSYL-L-HOMOCYSTEINE (SAH) HYDROLASE 2 (ATSAHH2)"]
["AT3G02470","black","Encodes a S-adenosylmethionine decarboxylase involved in polyamine biosynthesis.","S-ADENOSYLMETHIONINE DECARBOXYLASE (SAMDC)","S-ADENOSYLMETHIONINE DECARBOXYLASE (SAMDC)"]
["AT1G02500","black","encodes a S-adenosylmethionine synthetase. SAM1 is regulated by protein S-nitrosylation. The covalent binding of nitric oxide (NO) to the Cys114 residue inhibits the enzyme activity.","S-ADENOSYLMETHIONINE SYNTHETASE 1 (SAM1)","S-ADENOSYLMETHIONINE SYNTHETASE 1 (SAM1);S-ADENOSYLMETHIONINE SYNTHETASE-1 (SAM-1); (SAMS1); (AtSAM1); (METK1); (MAT1)"]
["AT5G28913","black","Member of Sadhu non-coding retrotransposon family","SADHU NON-CODING RETROTRANSPOSON 4-1 (SADHU4-1)","SADHU NON-CODING RETROTRANSPOSON 4-1 (SADHU4-1)"]
["AT4G01525","black","Member of Sadhu non-coding retrotransposon family","SADHU NON-CODING RETROTRANSPOSON 5-1 (SADHU5-1)","SADHU NON-CODING RETROTRANSPOSON 5-1 (SADHU5-1)"]
["AT3G27460","black","SGF29A and SGF29B, as subunits of the SAGA complex, specifically bind to H3K4me2/3 peptides, providing a molecular basis for the enrichment of H3K4me3 at SAGA-bound genes.","SAGA ASSOCIATED FACTOR 29 A (SGF29a)","SAGA ASSOCIATED FACTOR 29 A (SGF29a)"]
["AT5G40550","black","SGF29A and SGF29B, as subunits of the SAGA complex, specifically bind to H3K4me2/3 peptides, providing a molecular basis for the enrichment of H3K4me3 at SAGA-bound genes.","SAGA ASSOCIATED FACTOR 29 B (SGF29b)","SAGA ASSOCIATED FACTOR 29 B (SGF29b)"]
["AT2G37050","black","Protein kinase, functions in regulation of salt induced proteosome maturation by phosphorylation of UMP1A.","SALT INDUCED MALECTIN-LIKE DOMAIN-CONTAINING PROTEIN1 (SIMP1)","SALT INDUCED MALECTIN-LIKE DOMAIN-CONTAINING PROTEIN1 (SIMP1)"]
["AT3G46550","black","Isolated in a screen for salt hypersensitive mutants. Mutants have thinner cell walls, abnormal siliques and root growth is inhibited under salt stress. The gene has similarity to arabinogalactan proteins and domains associated with cell adhesion.SOS5 is required for normal mucilage adherence to seeds.","SALT OVERLY SENSITIVE 5 (SOS5)","SALT OVERLY SENSITIVE 5 (SOS5);FASCICLIN-LIKE ARABINOGALACTAN-PROTEIN 4 (FLA4)"]
["AT1G32310","black","Encodes a plant-specific negative regulator of the APC/C complex. It is expressed during embryogenesis and early plant development and plays a key role in organ size control. Mutants are defective in mitosis I of pollen development, resulting in pollen without sperm nuclei.","SAMBA (SAMBA)","SAMBA (SAMBA)"]
["AT5G13300","black","Belongs to 15-member small GTPase gene family, ARF-GAP domain proteins (AGD); corresponds to AGD3, and is one of four proteins belonging to class 1, together with AGD1, AGD2 and AGD4. The protein contains four domains: BAR domain, PH domain, an ARF-GAP domain, and two Ankyrin repeats. In sfc mutants, the secondary and tertiary veins of cotyledons, leaves, sepals and petals are largely replaced by small segments of discontinuous veins. sfc mutants have exaggerated responses to auxin.","SCARFACE (SFC)","SCARFACE (SFC);FORKED 2 (FKD2); (FKD2);ARF-GAP DOMAIN3 (AGD3);ASCULAR NETWORK DEFECTIVE 3 (VAN3)"]
["AT3G54990","black","Encodes a AP2 domain transcription factor that can repress flowering. SMZ and its paralogous gene, SNARCHZAPFEN (SNZ), share a signature with partial complementarity to the miR172 microRNA, whose precursor is induced upon flowering.","SCHLAFMUTZE (SMZ)","SCHLAFMUTZE (SMZ)"]
["AT4G18140","black","Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4).","SCP1-LIKE SMALL PHOSPHATASE 4B (SSP4b)","SCP1-LIKE SMALL PHOSPHATASE 4B (SSP4b)"]
["AT2G01470","black","Sec12p-like protein (GTP exchange protein) that functionally complements yeast sec12 null mutant. Protein is localized to the ER.","SEC12P-LIKE 2 PROTEIN (STL2P)","SEC12P-LIKE 2 PROTEIN (STL2P); (ATSEC12)"]
["AT1G11890","black","Member of SEC22 Gene Family; regulates cell morphogenesis via affecting cytoskeleton organization and stabilities.","SECRETION 22 (SEC22)","SECRETION 22 (SEC22);SECRETION 22 (ATSEC22); (SEC221)"]
["AT1G56330","black","Encodes a small GTP-binding protein implicated in ER to cis-Golgi transport of other proteins. A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. The protein is found associated to the ER and free in the cytosol.","SECRETION-ASSOCIATED RAS 1B (SAR1B)","SECRETION-ASSOCIATED RAS 1 (SAR1);SECRETION-ASSOCIATED RAS 1 (ATSAR1);ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS 1B (ATSARA1B);SECRETION-ASSOCIATED RAS 1B (ATSAR1B);SECRETION-ASSOCIATED RAS 1B (SAR1B)"]
["AT4G30520","black","Encodes SARK (SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE). Regulates leaf senescence through synergistic actions of auxin and ethylene. It is one of a group of LRR-RLKs, designated as CLAVATA3 INSENSITIVE RECEPTOR KINASES (CIKs), that act as co-receptors and have essential roles in regulating CLV3-mediated stem cell homeostasis.","SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE (SARK)","SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE (SARK);CLAVATA3 INSENSITIVE RECEPTOR KINASE 3 (CIK3)"]
["AT1G25320","black","Functions downstream of WRKY53 in regulating age-dependent leaf senescence. Leaf senescence is delayed in plants overexpressing this gene.","SENESCENCE-RELATED RECEPTOR KINASE 1 (SENRK1)","SENESCENCE-RELATED RECEPTOR KINASE 1 (SENRK1)"]
["AT3G06510","black","Encodes a protein with beta-glucosidase and galactosyltransferase activity, mutants show increased sensitivity to freezing. Though it is classified as a family I glycosyl hydrolase, it has no hydrolase activity in vitro.","SENSITIVE TO FREEZING 2 (SFR2)","SENSITIVE TO FREEZING 2 (SFR2)"]
["AT4G29520","black","SES1 is an ER localized chaperone involved in salt and heat stress response.","SENSITIVE TO SALT1 (SES1)","SENSITIVE TO SALT1 (SES1)"]
["AT5G59560","black","Encodes a novel protein conserved in higher eukaryotes. Normal function of the protein is required for normal oscillator function during circadian rhythm. Mutant analyses also suggest a role in phytochrome B (phyB)-mediated light signaling.","SENSITIVITY TO RED LIGHT REDUCED 1 (SRR1)","SENSITIVITY TO RED LIGHT REDUCED 1 (SRR1)"]
["AT5G56760","black","Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.","SERINE ACETYLTRANSFERASE 1;1 (SERAT1;1)","SERINE ACETYLTRANSFERASE 52 (SAT-52);SERINE ACETYLTRANSFERASE 5 (SAT5);SERINE ACETYLTRANSFERASE 1;1 (ATSERAT1;1);SERINE ACETYLTRANSFERASE 1;1 (SERAT1;1)"]
["AT3G45010","black","serine carboxypeptidase-like 48;(source:Araport11)","SERINE CARBOXYPEPTIDASE-LIKE 48 (scpl48)","SERINE CARBOXYPEPTIDASE-LIKE 48 (scpl48)"]
["AT4G11640","black","Serine racemase, which is a bifunctional PLP-dependent enzyme catalyzing racemization of serine and dehydration of serine to pyruvate in the same way as mammalian serine racemases. similar to mammalian serine racemases.","SERINE RACEMASE (SR)","SERINE RACEMASE (ATSR);SERINE RACEMASE (SR)"]
["AT3G44850","black","SRPK-family member protein.","SERINE/ARGININE PROTEIN KINASE 5 (SRPK5)","SERINE/ARGININE PROTEIN KINASE 5 (SRPK5)"]
["AT5G17240","black","NMD epigenetically regulates FLC though SDG40 to modulate flowering time.","SET DOMAIN GROUP 40 (SDG40)","SET DOMAIN GROUP 40 (SDG40)"]
["AT1G73100","black","Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain.","SU(VAR)3-9 HOMOLOG 3 (SUVH3)","SET DOMAIN PROTEIN 19 (SDG19);SU(VAR)3-9 HOMOLOG 3 (SUVH3)"]
["AT2G35160","black","Encodes SU(var)3-9 homologue 5 (SUVH5). SUVH5 has histone methyltransferase (MTase) activity in vitro and contributes to the maintenance of H3 mK9 (methylation of histone H3 at Lys-9) and CMT3-mediated non-CG methylation in vivo. This is a member of a subfamily of SET proteins that shares a conserved SRA domain.","SU(VAR)3-9 HOMOLOG 5 (SUVH5)","SET DOMAIN-CONTAINING PROTEIN 9 (SGD9);SU(VAR)3-9 HOMOLOG 5 (SUVH5)"]
["AT4G18060","black","SH3 domain-containing protein;(source:Araport11)","SH3 DOMAIN-CONTAINING PROTEIN 3 (SH3P3)","SH3 DOMAIN-CONTAINING PROTEIN 3 (SH3P3)"]
["AT1G57870","black","SK3-like kinase, subgroup IV","SHAGGY-LIKE KINASE 42 (SK42)","SHAGGY-LIKE KINASE 42 (SK42); (ASK&#948;)"]
["AT1G09840","black","GSK3-like kinase, sub-group IV.","SHAGGY-LIKE PROTEIN KINASE 41 (SK41)","SHAGGY-LIKE PROTEIN KINASE 41 (ATSK41);SHAGGY-LIKE PROTEIN KINASE 41 (SK41);HYPERSENSITIVE INDUCED REACTION 1 (HIR1); (AtHIR1); (ASKK)"]
["AT4G39540","black","Encodes a shikimate kinase. Its transcripts appear to be expressed in vegetative tissues and developing embryos. SK2 transcript levels rise in response to Phytophthora infestans spores. SK2 is believed to be localized to the chloroplast.","SHIKIMATE KINASE 2 (SK2)","SHIKIMATE KINASE 2 (SK2); (ATSK2)"]
["AT5G63780","black","Encodes SHA1 (shoot apical meristem arrest), a putative E3 ligase (a RING finger protein) required for post-embryonic SAM maintenance. The mutant sha1-1 shows a primary SAM-deficient phenotype at the adult stage.","SHOOT APICAL MERISTEM ARREST 1 (SHA1)","SHOOT APICAL MERISTEM ARREST 1 (SHA1)"]
["AT4G37650","black","Involved in radial organization of the root and shoot axial organs. Essential for normal shoot gravitropism. The protein moves in a highly specific manner from the cells of the stele in which it is synthesized outward. Movement requires sequences within the GRAS and VHIID domains. SHORT-ROOT forms a network in combination with JACKDAW, BLUEJAY AND SCARECROW to regulate tissue patterning through asymmetric cell division. The ground tissue lineage remains in shortroot mutant, while it is progressively lost in the triple mutant bluejay jackdaw scarecrow and double mutant jackdaw scarecrow. In addition, ground tissue basal identity remains in shortroot mutant while it is defective in the quadruple mutant bluejay jackdaw magpie nutcracker.","SHORT ROOT (SHR)","SHORT ROOT (SHR);ENDODERMAL-AMYLOPLAST LESS 1 (EAL1);SHOOT GRAVITROPISM 7 (SGR7); (EAL1)"]
["AT3G10440","black","Encodes a protein that protects meiotic centromere cohesion.","SHUGOSHIN 1 (SGO1)","SHUGOSHIN 1 (SGO1); (ATSGO1)"]
["AT4G16960","black","Redundant function together with SIKIC1 and 2 in SNC1-mediated autoimmunity. Protein levels controlled by MUSE1 and MUSE2.","SIDEKICK SNC1 3 (SIKIC3)","SIDEKICK SNC1 3 (SIKIC3)"]
["AT2G03120","black","homologous to Signal Peptide Peptidases (SPP), required for pollen development and pollen germination. No homozygotes could be recovered from a T-DNA insertion mutant. The mRNA is cell-to-cell mobile.","SIGNAL PEPTIDE PEPTIDASE (SPP)","SIGNAL PEPTIDE PEPTIDASE (SPP);SIGNAL PEPTIDE PEPTIDASE (ATSPP)"]
["AT1G73990","black","Encodes a light-inducible chloroplast protease complex associated with thylakoid membranes.","SIGNAL PEPTIDE PEPTIDASE (SPPA)","SIGNAL PEPTIDE PEPTIDASE (SPPA); (SPPA1)"]
["AT1G63690","black","SIGNAL PEPTIDE PEPTIDASE-LIKE 2;(source:Araport11)","SIGNAL PEPTIDE PEPTIDASE-LIKE 2 (SPPL2)","SIGNAL PEPTIDE PEPTIDASE-LIKE 2 (ATSPPL2);SIGNAL PEPTIDE PEPTIDASE-LIKE 2 (SPPL2)"]
["AT5G09230","black","Encodes SRT2, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).Homolog of mammalian SIRT7 homolog which was described as an rRNA deacetylase.","SIRTUIN 2 (SRT2)","SIRTUIN 2 (SRT2)"]
["AT3G61350","black","Encodes an SKP1 interacting partner (SKIP4).","SKP1 INTERACTING PARTNER 4 (SKIP4)","SKP1 INTERACTING PARTNER 4 (SKIP4)"]
["AT4G08980","black","Encodes an F-box gene that is a novel negative regulator of AGO1 protein levels and may play a role in ABA signalling and/or response. It is a F-box subunit of the SCF E3 ubiquitin ligase complex that mediates the degradation of 14-3-3 proteins.","F-BOX WITH WD-40 2 (FBW2)","SKP1/ASK-INTERACTING PROTEIN 18 (SKIP18);F-BOX WITH WD-40 2 (FBW2)"]
["AT4G22010","black","SKU5 similar 4;(source:Araport11)","SKU5 SIMILAR 4 (sks4)","SKU5 SIMILAR 4 (sks4)"]
["AT1G41830","black","SKU5-similar 6;(source:Araport11)","SKU5-SIMILAR 6 (SKS6)","SKU5 SIMILAR 6 (sks6);SKU5-SIMILAR 6 (SKS6)"]
["AT5G18290","black","Belongs to a family of plant aquaporins.Similar to yeast and radish aquaporins. Located on ER","(SIP1;2)","SMALL AND BASIC INTRINSIC PROTEIN 1B (SIP1b); (SIP1;2)"]
["AT3G56950","black","One of the Major Intrinsic Proteins(MIPs) which facilitate the passive transport of small molecules across membranes.Belongs to a family of plant aquaporins.Similar to yeast and radish aquaporins. Located on ER. Probably involved in the alleviation of ER stress; the lack of SIP2;1 reduces both pollen germination and pollen tube elongation.","SMALL AND BASIC INTRINSIC PROTEIN 2;1 (SIP2;1)","SMALL AND BASIC INTRINSIC PROTEIN 2;1 (SIP2;1)"]
["AT1G55270","black","SAGL1 is a member of a small family of KELCH domain containing proteins. Loss of function mutants show increased lignin and anthocyanin production suggesting a role in regulation of phenylpropanoid biosynthesis.","SMALL AND GLOSSY LEAVES1 (SAGL1)","SMALL AND GLOSSY LEAVES1 (SAGL1)"]
["AT1G75580","black","SAUR-like auxin-responsive protein family;(source:Araport11)","SMALL AUXIN UPREGULATED RNA 51 (SAUR51)","SMALL AUXIN UPREGULATED RNA 51 (SAUR51)"]
["AT2G16580","black","SAUR-like auxin-responsive protein family;(source:Araport11)","SMALL AUXIN UPREGULATED RNA 8 (SAUR8)","SMALL AUXIN UPREGULATED RNA 8 (SAUR8)"]
["AT1G67360","black","Encodes a small rubber particle protein homolog. Plays dual roles as positive factors for tissue growth and development and in drought stress responses.","LD-ASSOCIATED PROTEIN 1 (LDAP1)","SMALL RUBBER PARTICLE PROTEIN (SRP1);LD-ASSOCIATED PROTEIN 1 (LDAP1)"]
["AT1G06515","black","Encodes a 56-amino acid polypeptide with low but significant similarity to human small subunit of serine palmitoyltransferase that localizes to the ER and physically interacts with and greatly stimulates the activity of LCB1/LCB2 heterodimer ser palmitoyltransferase complex. Mutants have low pollen viability.","SMALL SUBUNIT OF SPT A (SSSPTA)","SMALL SUBUNIT OF SPT A (SSSPTA)"]
["AT1G56580","black","Encodes SMALLER WITH VARIABLE BRANCHES (SVB), a protein with a conserved domain of unknown function (DUF538). The trichomes of the SVB mutants are smaller and exhibit branches of variable length and number. ABA responsive trichome formation regulator.","SMALLER WITH VARIABLE BRANCHES (SVB)","SMALLER WITH VARIABLE BRANCHES (SVB)"]
["AT5G57130","black","Encodes a member of an eight-gene family (SMAX1 and SMAX1-like) that has weak similarity to AtHSP101, a ClpB chaperonin required for thermotolerance.","SMAX1-LIKE 5 (SMXL5)","SMAX1-LIKE 5 (SMXL5)"]
["AT2G29970","black","Encodes a member of an eight-gene family (SMAX1 and SMAX1-like) that has weak similarity to AtHSP101, a ClpB chaperonin required for thermotolerance. The mRNA is cell-to-cell mobile.","SMAX1-LIKE 7 (SMXL7)","SMAX1-LIKE 7 (SMXL7)"]
["AT1G19120","black","Component of the 5?-3? mRNA decay pathway which constitutes a post-transcriptional regulatory layer of the circadian gene network.","SM-LIKE 1A (LSM1A)","SM-LIKE 1A (LSM1A)"]
["AT3G05030","black","Encodes a vacuolar K+/H+ exchanger essential for active K+ uptake at the tonoplast and involved in regulating stomatal closure.","SODIUM HYDROGEN EXCHANGER 2 (NHX2)","SODIUM HYDROGEN EXCHANGER 2 (NHX2); (ATNHX2)"]
["AT5G02600","black","Encodes a phloem mobile metal binding protein necessary for phloem function and root meristem maintenance.","SODIUM POTASSIUM ROOT DEFECTIVE 1 (NAKR1)","SODIUM POTASSIUM ROOT DEFECTIVE 1 (NAKR1);HEAVY METAL ASSOCIATED PROTEIN 42 (ATHMP42);NUCLEAR-ENRICHED PHLOEM COMPANION CELL GENE 6 (NPCC6)"]
["AT2G37390","black","Chloroplast-targeted copper chaperone protein;(source:Araport11)","SODIUM POTASSIUM ROOT DEFECTIVE 2 (NAKR2)","SODIUM POTASSIUM ROOT DEFECTIVE 2 (NAKR2);HEAVY METAL ASSOCIATED PROTEIN 21 (ATHMP21)"]
["AT1G71830","black","Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. SERK1 interacts with and transphosphorylates EMS1","SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1 (SERK1)","SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1 (ATSERK1);SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1 (SERK1)"]
["AT2G13790","black","Receptor-like protein kinase that plays a role in myriad processes such as plant-type hypersensitive response, defense response, stomatal movement,and brassinosteroid signalling.","SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 4 (SERK4)","SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 4 (ATSERK4);SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 4 (SERK4);BAK1-LIKE 1 (BKK1);BRI1- ASSOCIATED KINASE 7 (BAK7)"]
["AT5G07120","black","Encodes sorting nexin SNX2b. SNX2b is peripherally associated with membranes. Involved in vesicular trafficking from endosomes to the vacuole.","SORTING NEXIN 2B (SNX2b)","SORTING NEXIN 2B (SNX2b)"]
["AT4G36930","black","Encodes a transcription factor of the bHLH protein family. Mutants have abnormal, unfused carpels and reduced seed dormancy.","SPATULA (SPT)","SPATULA (SPT)"]
["AT1G50890","black","Encodes a microtubule associated protein that interacts with and is phosphorylated by SnRK2.6 under salt stress and ABA treatment. Phosphorylation at serine 406 mediates root halotropism by inducing a change in anisotropic cell expansion through MT reorientation.","SPIRAL2-LIKE (SP2L)","SPIRAL2-LIKE (SP2L)"]
["AT5G04290","black","Encodes SPT5-Like, a member of the nuclear SPT5 (Suppressor of Ty insertion 5) RNA polymerase (RNAP) elongation factor family that is characterized by the presence of a carboxy-terminal extension with more than 40 WG/GW motifs. Interacts with AGO4. Required for RNA-directed DNA methylation. The mRNA is cell-to-cell mobile.","KOW DOMAIN-CONTAINING TRANSCRIPTION FACTOR 1 (KTF1)","SPT5-LIKE (SPT5L);KOW DOMAIN-CONTAINING TRANSCRIPTION FACTOR 1 (KTF1)"]
["AT5G20150","black","Expression is upregulated in the shoot of cax1/cax3 mutant. Additionally, its expression is responsive to both phosphate (Pi) and phosphite (Phi) in both roots and shoots. The mRNA is cell-to-cell mobile.","SPX DOMAIN GENE 1 (SPX1)","SPX DOMAIN GENE 1 (SPX1);ARABIDOPSIS THALIANA SPX DOMAIN GENE 1 (ATSPX1)"]
["AT2G22830","black","squalene epoxidase 2;(source:Araport11)","SQUALENE EPOXIDASE 2 (SQE2)","SQUALENE EPOXIDASE 2 (SQE2)"]
["AT1G44000","black","STAY-GREEN-like protein;(source:Araport11)","STAY-GREEN LIKE (SGRL)","STAY-GREEN LIKE (SGRL)"]
["AT2G41770","black","Regulates the assembly and trafficking of cellulose synthase complexes.","STELLO1 (STL1)","STELLO1 (STL1)"]
["AT2G25790","black","Leucine-rich receptor-like protein kinase family protein;(source:Araport11)","STERILITY-REGULATING KINASE MEMBER 1 (SKM1)","STERILITY-REGULATING KINASE MEMBER 1 (SKM1)"]
["AT4G22756","black","Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. More specifically functions as a 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase. Works together with SMO1-1 to maintain correct sterol composition and balance auxin and cytokinin activities during embryogenesis.","STEROL C4-METHYL OXIDASE 1-2 (SMO1-2)","STEROL C4-METHYL OXIDASE 1-2 (SMO1-2);STEROL C4-METHYL OXIDASE 1 (SMO1); (ATSMO1-2);ARABIDOPSIS THALIANA STEROL 4-ALPHA-METHYL OXIDASE 1 (ATSMO1)"]
["AT1G20330","black","Encodes a sterol-C24-methyltransferases involved in sterol biosynthesis. Mutants display altered sterol composition, serrated petals and sepals and altered cotyledon vascular patterning as well as ectopic endoreduplication. This suggests that suppression of endoreduplication is important for petal morphogenesis and that normal sterol composition is required for this suppression.","STEROL METHYLTRANSFERASE 2 (SMT2)","STEROL METHYLTRANSFERASE 2 (SMT2);COTYLEDON VASCULAR PATTERN 1 (CVP1);FRILL1 (FRL1)"]
["AT4G12110","black","Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. More specifically functions as a 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase. Works together with SMO1-2 to maintain correct sterol composition and balance auxin and cytokinin activities during embryogenesis.","STEROL-4ALPHA-METHYL OXIDASE 1-1 (SMO1-1)","STEROL-4ALPHA-METHYL OXIDASE 1-1 (SMO1-1);ARABIDOPSIS THALIANA STEROL 4-ALPHA-METHYL OXIDASE 1 (ATSMO1); (ATSMO1-1)"]
["AT3G56480","black","myosin heavy chain-like protein;(source:Araport11)","STOMATAL CLOSURE-RELATED ACTIN BINDING PROTEIN 3 (SCAB3)","STOMATAL CLOSURE-RELATED ACTIN BINDING PROTEIN 3 (SCAB3)"]
["AT1G49040","black","Encodes soluble protein containing N-terminal DENN domain and eight C-terminal WD-40 repeats. Involved in cytokinesis of guard mother cells and leaf epidermal cells. The overall growth and development of mutant plants is severely affected, they are smaller than wt, with defects in seedling development, leaf expansion and flower morphology which renders the mutant conditionally sterile.","STOMATAL CYTOKINESIS-DEFECTIVE 1 (SCD1)","STOMATAL CYTOKINESIS-DEFECTIVE 1 (SCD1)"]
["AT3G57480","black","SAP1 is a protein of unknown function whose expression is responsive to abiotic stressors including metals, salt, and ABA. Over expression confers increased tolerance to a variety of abiotic stressors.","STRESS ASSOCIATED PROTEIN 13 (SAP13)","STRESS ASSOCIATED PROTEIN 13 (SAP13)"]
["AT2G17975","black","SRP1 is a C2C2 type zinc finger protein that binds RNA. It has a role in response to ABA.. It can bind the 3'UTR of ABI2 and appears to be involved in RNA turnover.","STRESS ASSOCIATED RNA-BINDING PROTEIN 1 (SRP1)","STRESS ASSOCIATED RNA-BINDING PROTEIN 1 (SRP1)"]
["AT2G21970","black","stress enhanced protein 2 (SEP2) chlorophyll a/b-binding protein","STRESS ENHANCED PROTEIN 2 (SEP2)","STRESS ENHANCED PROTEIN 2 (SEP2)"]
["AT1G55760","black","Expression induced under NaCl, mannitol, ABA and indole-3-acetic acid (IAA) treatment.","STRESS-INDUCED BTB PROTEIN1 (SIBP1)","STRESS-INDUCED BTB PROTEIN1 (SIBP1)"]
["AT1G08470","black","Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.","STRICTOSIDINE SYNTHASE-LIKE 3 (SSL3)","STRICTOSIDINE SYNTHASE-LIKE 3 (SSL3)"]
["AT2G25110","black","Encodes an endoplasmic reticulum protein SDF2 (stromal-derived factor-2). Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.","STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN PRECURSOR (SDF2)","STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN PRECURSOR (SDF2);ATSDF2-LIKE (ATSDL);ARABIDOPSIS THALIANA STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN PRECURSOR (AtSDF2)"]
["AT3G14350","black","STRUBBELIG-receptor family 7;(source:Araport11)","STRUBBELIG-RECEPTOR FAMILY 7 (SRF7)","STRUBBELIG-RECEPTOR FAMILY 7 (SRF7)"]
["AT2G05920","black","Subtilase family protein;(source:Araport11)","SUBTILASE 1.8 (SBT1.8)","SUBTILASE 1.8 (SBT1.8)"]
["AT5G62575","black","Encodes subunit 7 of mitochondrial complex II (succinate dehydrogenase complex) and participates in the respiratory chain. It contributes to anchoring succinate dehydrogenase to the inner mitochondrial membrane. The mRNA is cell-to-cell mobile.","SUCCINATE DEHYDROGENASE 7 (SDH7)","SUCCINATE DEHYDROGENASE 7 (SDH7);SUCCINATE DEHYDROGENASE 7B (SDH7B)"]
["AT4G40010","black","encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.","SNF1-RELATED PROTEIN KINASE 2.7 (SNRK2.7)","SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-7 (SNRK2-7);SNF1-RELATED PROTEIN KINASE 2.7 (SNRK2.7); (SRK2F)"]
["AT1G09960","black","low affinity (10mM) sucrose transporter in sieve elements (phloem)","SUCROSE TRANSPORTER 4 (SUT4)","SUCROSE TRANSPORTER 4 (SUT4);SUCROSE TRANSPORTER 4 (ATSUT4);SUCROSE TRANSPORTER 4 (SUC4);SUCROSE TRANSPORTER 4 (ATSUC4)"]
["AT5G10020","black","Sucrose induced LLR receptor kinase. Involved in sucrose signaling and regulation of aquaporins.","SUCROSE-INDUCED RECEPTOR KINASE 1 (SIRK1)","SUCROSE-INDUCED RECEPTOR KINASE 1 (SIRK1)"]
["AT1G73660","black","Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance.","SUGAR INSENSITIVE 8 (SIS8)","SUGAR INSENSITIVE 8 (SIS8); (M3Kdelta6)"]
["AT4G02050","black","STP7 is a monosaccharide/H+ symporter that transports arabinose and xylose.","SUGAR TRANSPORTER PROTEIN 7 (STP7)","SUGAR TRANSPORTER PROTEIN 7 (STP7)"]
["AT3G15990","black","Vascular cambium-localized sulfate transporter, mediates xylem-to-phloem transfer of phosphorus. 2 for its preferential distribution","SULFATE TRANSPORTER 3;4 (SULTR3;4)","SULFATE TRANSPORTER 3;4 (SULTR3;4);SULTR-LIKE P DISTRIBUTION TRANSPORTER (SPDT)"]
["AT5G13550","black","Encodes a sulfate transporter.","SULFATE TRANSPORTER 4.1 (SULTR4;1)","SULFATE TRANSPORTER 4.1 (SULTR4;1)"]
["AT3G01910","black","Encodes a homodimeric Mo-enzyme with molybdopterin as organic component of the molybdenum cofactor. It lacks the heme domain that other eukaryotic Mo-enzymes possess and has no redox-active centers other than the molybdenum. SO protein has been found in all parts of the plant. The plant SO combines its enzymatic sulfite oxidation with a subsequent nonenzymatic step using its reaction product H2O2 as intermediate for oxidizing another molecule of sulfite.","SULFITE OXIDASE (SOX)","SULFITE OXIDASE (SOX); (AT-SO); (AtSO)"]
["AT3G07200","black","RING/U-box superfamily protein. SUMO- targeted ubiquitin ligase.","SUMO-TARGETED UBIQUITIN E3 LIGASE 3 (STUBL3)","SUMO-TARGETED UBIQUITIN E3 LIGASE 3 (STUBL3)"]
["AT3G43220","black","Phosphoinositide phosphatase family protein;(source:Araport11)","SUPPRESSOR OF ACTIN 3 (SAC3)","SUPPRESSOR OF ACTIN 3 (SAC3)"]
["AT2G43710","black","Encodes a stearoyl-ACP desaturase, involved in fatty acid desaturation. The ssi2 mutants have increased 18:0 and reduced 18:1 fatty acids. Exogenous application of glycerol to wild type plants mimics the ssi2 mutant phenotype. The altered 18:1 fatty acid content in the ssi2 mutants has an impact on SA- and JA-mediated defense signaling. ssi2 mutants resulted in hyper-resistance to green peach aphid and antibiosis activity in petiole exudates. Redundant &#916;9 stearoyl-ACP desaturase gene which together with AAD1 and AAD5 during embryo development provide precursors for the elaboration of embryo cuticle and therefore plays a specific role during the phase of invasive embryo growth through the endosperm. Together with AAD1, AAD5, and AAD6 redundantly participates in oil storage during the maturation phase.","SUPPRESSOR OF SA INSENSITIVE 2 (SSI2)","SUPPRESSOR OF SA INSENSITIVE 2 (SSI2);FATTY ACID BIOSYNTHESIS 2 (FAB2);LESION DWARF MIMIC 1 (LDW1); (ATSSI2)"]
["AT2G45070","black","Sec61 Beta Subunit","SUPPRESSORS OF SECRETION-DEFECTIVE 61 BETA (SEC61 BETA)","SUPPRESSORS OF SECRETION-DEFECTIVE 61 BETA (SEC61 BETA)"]
["AT1G31760","black","SWIB/MDM2 domain superfamily protein;(source:Araport11)","SWI/SNF PROTEIN COMPLEX B5 (SWIB5)","SWI/SNF PROTEIN COMPLEX B5 (SWIB5)"]
["AT3G24350","black","member of Glycoside Hydrolase Family 17; Golgi-localized Qa-soluble N-ethylmaleimide sensitive factor attachment protein receptor. SYP31 and SYP32 directly interacted with COG3, a subunit of the conserved oligomeric Golgi (COG) complex and were responsible for its Golgi localization, providing an underlying mechanism for SYP31/32 function in intra-Golgi trafficking. We propose that SYP31 and SYP32 play partially redundant roles in pollen development by modulating protein trafficking and Golgi structure","SYNTAXIN OF PLANTS 32 (SYP32)","SYNTAXIN OF PLANTS 32 (SYP32)"]
["AT5G05760","black","A SNARE protein (ortholog of syntaxin 5), a membrane fusion machine component involved in cytokinesis; Golgi-localized Qa-soluble N-ethylmaleimide sensitive factor attachment protein receptor. SYP31 and SYP32 directly interacted with COG3, a subunit of the conserved oligomeric Golgi (COG) complex and were responsible for its Golgi localization, providing an underlying mechanism for SYP31/32 function in intra-Golgi trafficking. We propose that SYP31 and SYP32 play partially redundant roles in pollen development by modulating protein trafficking and Golgi structure.","SYNTAXIN OF PLANTS 31 (SYP31)","SYNTAXIN OF PLANTS 31 (SYP31);T-SNARE SED 5 (SED5); (ATSYP31); (ATSED5)"]
["AT3G25710","black","Encodes a basic helix-loop-helix transcription factor that is expressed in the hypophysis-adjacent embryo cells, and is required and partially sufficient for MP-dependent root initiation. Involved in response to phosphate starvation. Negative regulator of root hair development, anthocyanin formation and Pi content. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in shoots.","BASIC HELIX-LOOP-HELIX 32 (BHLH32)","TARGET OF MONOPTEROS 5 (TMO5);BASIC HELIX-LOOP-HELIX 32 (BHLH32); (ATAIG1)"]
["AT1G72010","black","Modulates GA-dependent stamen filament elongation by direct activation of SAUR63 subfamily genes through conserved target sites in their promoters. Promotes together with TCP7, 8, 14, 15, 21, and 23 endoreduplication-dependent cell expansion in leaf.","TCP DOMAIN PROTEIN 22 (TCP22)","TCP DOMAIN PROTEIN 22 (TCP22); (ATTCP22)"]
["AT3G15030","black","Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation. Promotes hypocotyl elongation when hyperactivated. Enhance hypocotyl cell elongation by directly activating YUC5.","TCP FAMILY TRANSCRIPTION FACTOR 4 (TCP4)","TCP FAMILY TRANSCRIPTION FACTOR 4 (TCP4);MATERNAL EFFECT EMBRYO ARREST 35 (MEE35); (PCF4)"]
["AT3G49850","black","Encodes a telomeric DNA binding protein. In vitro, the protein preferentially binds double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand.Single Myb Histone (SMH) gene family member. Contains terminal acidic SANT domain.","TELOMERE REPEAT BINDING FACTOR 3 (TRB3)","TELOMERE-BINDING PROTEIN 2 (TBP2); (ATTRB3);TELOMERE REPEAT BINDING FACTOR 3 (TRB3)"]
["AT3G12560","black","Encodes a telomeric DNA-binding protein.","TRF-LIKE 9 (TRFL9)","TELOMERIC DNA-BINDING PROTEIN 2 (ATTBP2);TRF-LIKE 9 (TRFL9)"]
["AT1G53230","black","Encodes a member of a recently identified plant transcription factor family that includes Teosinte branched 1, Cycloidea 1, and proliferating cell nuclear antigen (PCNA) factors, PCF1 and 2. Regulated by miR319. Involved in heterochronic regulation of leaf differentiation. Elongates hypocotyl when miR319-resistant version is overexpressed. Suppresses auxin response by activating IAA3/SHY2 and SAUR genes.","TEOSINTE BRANCHED 1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 3 (TCP3)","TEOSINTE BRANCHED 1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 3 (TCP3)"]
["AT1G30210","black","TCP family protein involved in heterochronic regulation of leaf differentiation. Represses photomorphogenic growth in miR319-dependent manner. Together with TCP4, 2, 3 and 10 enhances hypocotyl cell elongation by directly activating YUC5.","TEOSINTE BRANCHED 1, CYCLOIDEA, AND PCF FAMILY 24 (TCP24)","TEOSINTE BRANCHED 1, CYCLOIDEA, AND PCF FAMILY 24 (TCP24); (ATTCP24)"]
["AT4G14770","black","Regulates fate transition and cell Divisions in the stomatal lineage.","TESMIN/TSO1-LIKE CXC 2 (TCX2)","TESMIN/TSO1-LIKE CXC 2 (TCX2);TESMIN/TSO1-LIKE CXC 2 (ATTCX2); (SOL2)"]
["AT1G63260","black","Member of TETRASPANIN family","TETRASPANIN10 (TET10)","TETRASPANIN10 (TET10)"]
["AT5G57810","black","Member of TETRASPANIN family","TETRASPANIN15 (TET15)","TETRASPANIN15 (TET15)"]
["AT4G28050","black","Member of TETRASPANIN family","TETRASPANIN7 (TET7)","TETRASPANIN7 (TET7)"]
["AT1G53300","black","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. The TTL family is required for osmotic stress tolerance and male sporogenesis. The mRNA is cell-to-cell mobile.","TETRATRICOPEPTIDE-REPEAT THIOREDOXIN-LIKE 1 (TTL1)","TETRATRICOPEPTIDE-REPEAT THIOREDOXIN-LIKE 1 (TTL1)"]
["AT2G42580","black","Encodes a member of the TTL family and contains a thioredoxin like domain and three tandom TPRs. Interacts physically with BRL2/VH1 and appears to play a role in brassiosteroid and auxin signaling. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. The TTL family is required for osmotic stress tolerance and male sporogenesis. The mRNA is cell-to-cell mobile.","TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 3 (TTL3)","TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 3 (TTL3);VHI-INTERACTING TPR CONTAINING PROTEIN (VIT)"]
["AT5G54380","black","Encodes THESEUS1 (THE1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth.","THESEUS1 (THE1)","THESEUS1 (THE1)"]
["AT5G39950","black","encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.","THIOREDOXIN 2 (TRX2)","THIOREDOXIN 2 (ATTRX2);ARABIDOPSIS THIOREDOXIN H2 (ATH2);THIOREDOXIN 2 (TRX2);THIOREDOXIN H2 (TRXH2); (ATTRXH2)"]
["AT1G08630","black","Encodes a threonine aldolase, involved in threonine degradation to glycine. Primarily expressed in seeds and seedlings.","THREONINE ALDOLASE 1 (THA1)","THREONINE ALDOLASE 1 (THA1)"]
["AT3G63180","black","TIC-like protein;(source:Araport11)","TIC-LIKE (TKL)","TICKLE (ATTKL);TIC-LIKE (TKL)"]
["AT1G21380","black","Encodes a member of the Arabidopsis TOL (TOM1-LIKE) family of ubiquitin binding proteins that acts redundantly in the recognition and further endocytic sorting of a PIN-FORMED (PIN)-type auxin carrier protein at the plasma membrane, modulating dynamic auxin distribution and associated growth responses.","TOM1-LIKE 3 (TOL3)","TOM1-LIKE 3 (TOL3)"]
["AT1G63670","black","hypothetical protein (DUF3741);(source:Araport11)","TON1 RECRUITING MOTIF 12 (TRM12)","TON1 RECRUITING MOTIF 12 (TRM12)"]
["AT2G45900","black","Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein;(source:Araport11)","TON1 RECRUITING MOTIF 13 (TRM13)","TON1 RECRUITING MOTIF 13 (TRM13)"]
["AT3G61380","black","Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-like protein;(source:Araport11)","TON1 RECRUITING MOTIF 14 (TRM14)","TON1 RECRUITING MOTIF 14 (TRM14)"]
["AT4G00440","black","GPI-anchored adhesin-like protein, putative (DUF3741);(source:Araport11)","TON1 RECRUITING MOTIF 15 (TRM15)","TON1 RECRUITING MOTIF 15 (TRM15)"]
["AT5G43880","black","methyl-coenzyme M reductase II subunit gamma, putative (DUF3741);(source:Araport11)","TON1 RECRUITING MOTIF 21 (TRM21)","TON1 RECRUITING MOTIF 21 (TRM21)"]
["AT5G51850","black","hypothetical protein;(source:Araport11)","TON1 RECRUITING MOTIF 24 (TRM24)","TON1 RECRUITING MOTIF 24 (TRM24)"]
["AT5G62170","black","LOW protein: M-phase inducer phosphatase-like protein;(source:Araport11)","TON1 RECRUITING MOTIF 25 (TRM25)","TON1 RECRUITING MOTIF 25 (TRM25)"]
["AT2G36420","black","nucleolin-like protein;(source:Araport11)","TON1 RECRUITING MOTIF 27 (TRM27)","TON1 RECRUITING MOTIF 27 (TRM27)"]
["AT1G74160","black","Member of a small gene family in Arabidopsis. Quadruple mutants in this family display defects in cell elongation.","TON1 RECRUITING MOTIF 4 (TRM4)","TON1 RECRUITING MOTIF 4 (TRM4);LONGIFOLIA 3 (LNG3);LONGIFOLIA 4 (LNG4)"]
["AT3G05750","black","Encodes a member of the TRM superfamily, that plays a role in preprophase band formation during plant cell division and controls the robustness of the orientation of that cell division.","TON1 RECRUITING MOTIF 6 (TRM6)","TON1 RECRUITING MOTIF 6 (TRM6)"]
["AT5G26910","black","Encodes a member of the TRM superfamily, that plays a role in preprophase band formation during plant cell division and controls the robustness of the orientation of that cell division.","TON1 RECRUITING MOTIF 8 (TRM8)","TON1 RECRUITING MOTIF 8 (TRM8)"]
["AT3G55005","black","Encodes a protein of unknown function that is involved in cortical microtubule organization. Mutants exhibit abnormal cell growth and patterns of division. TON1B appears to be redundant with TON1A. Encodes a novel protein that is similar to human FOP and OFD1 centrosomal proteins. Localizes to the preprophase band, cytoplasm and cell cortex where it is probably associated with the cortical cytoskeleton. TON1B associates with plant centrin CEN1.","TONNEAU 1B (TON1B)","TONNEAU 1B (TON1B)"]
["AT1G80080","black","Encodes a transmembrane leucine-repeat containing receptor-like protein that is expressed in proliferative postprotodermal cells. Recessive mutation leads to disruption of asymmetric cell division during stomata development. Its transcript levels change after inducing MUTE expression in a mute background.","TOO MANY MOUTHS (TMM)","TOO MANY MOUTHS (TMM);RECEPTOR LIKE PROTEIN 17 (AtRLP17)"]
["AT4G27060","black","Encodes a novel, plant-specific microtubule-associated protein that regulates the orientation of cortical microtubules and the direction of organ growth. The protein plays a role in control of microtubule dependent anisotropic cell elongation. spr2 mutant rosette leaves, cauline leaves, roots, petioles and petals curl in an anticlockwise direction.","TORTIFOLIA 1 (TOR1)","TORTIFOLIA 1 (TOR1);SPIRAL 2 (SPR2);CONVOLUTA (CN)"]
["AT5G57460","black","TPLATE complex subunit involved in clathirin mediated endocytosis.","TPLATE COMPLEX MUNISCIN-LIKE (TML)","TPLATE COMPLEX MUNISCIN-LIKE (TML)"]
["AT2G39675","black","Trans-acting siRNA1c primary transcript (TAS1c). Gb: AY922999","TRANS-ACTING SIRNA1C (TAS1C)","TRANS-ACTING SIRNA1C (TAS1C)"]
["AT4G23430","black","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 32-IVA (Tic32-IVa)","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 32-IVA (Tic32-IVa);TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 32-IVA (AtTic32-IVa); (TIC32)"]
["AT2G24820","black","translocon at the inner envelope membrane of chloroplasts 55-II;(source:Araport11)","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 55-II (TIC55-II)","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 55-II (TIC55-II);TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 55 (Tic55);TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 55 (AtTic55)"]
["AT3G55120","black","Catalyzes the conversion of chalcones into flavanones. Required for the accumulation of purple anthocyanins in leaves and stems. Co-expressed with CHS.","TRANSPARENT TESTA 5 (TT5)","TRANSPARENT TESTA 5 (TT5); (A11);CHALCONE FLAVANONE ISOMERASE (CFI);CHALCONE ISOMERASE (CHI); (ATCHI)"]
["AT5G07990","black","Required for flavonoid 3' hydroxylase activity. Enzyme abundance relative to CHS determines Quercetin/Kaempferol metabolite ratio. The mRNA is cell-to-cell mobile.","TRANSPARENT TESTA 7 (TT7)","TRANSPARENT TESTA 7 (TT7); (D501);CYTOCHROME P450 75B1 (CYP75B1)"]
["AT4G09820","black","TT8 is a regulation factor that acts in a concerted action with TT1, PAP1 and TTG1 on the regulation of flavonoid pathways, namely proanthocyanidin and anthocyanin biosynthesis. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Also important for important for marginal trichome development. It binds the promoter of both AT3G26790 and AT1G28300.TT8 interacts with JAZ proteins to regulate anthocyanin accumulation. TT8 acts maternally to affect seed FA biosynthesis and inhibits seed FA accumulation by down-regulating a group of genes either critical to embryonic development or important in the FA biosynthesis pathway. TT8 represses the activities of LEAFY COTYLEDON1, LEAFY COTYLEDON2, and FUSCA3, the critical transcriptional factors important for seed development.","TRANSPARENT TESTA 8 (TT8)","TRANSPARENT TESTA 8 (TT8); (BHLH42); (ATTT8)"]
["AT5G24520","black","Required for the accumulation of purple anthocyanins in leaves and stems. Involved in trichome and root hair development. Controls epidermal cell fate specification. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Based on clonal analysis and other methonds TTG1 has been shown to act non-cell autonomously and to move via plasmodesmata between cells.Localization and levels of TTG1 affect patterning of leaf trichomes. Auxin and ethylene responsiveness of TTG1 transcription is lost in myb12 mutants.","TRANSPARENT TESTA GLABRA 1 (TTG1)","TRANSPARENT TESTA GLABRA 1 (ATTTG1);UNARMED 23 (URM23); (TTG);TRANSPARENT TESTA GLABRA 1 (TTG1)"]
["AT1G70560","black","TAA1 is involved in the shade-induced production of indole-3-pyruvate (IPA), a precursor to IAA, a biologically active auxin. It is also involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling. This enzyme can catalyze the formation of IPA from L-tryptophan. Though L-Trp is expected to be the preferred substrate in vivo, TAA1 also acts as an aminotransferase using L-Phe, L-Tyr, L-Leu, L-Ala, L-Met, and L-Gln. Lines carrying mutations in this gene are unaffected by auxin transporter inhibitor NPA. Double mutant analysis and exogenous auxin treatment suggest that this gene is required for auxin signaling during lateral root and root meristem development. The activity of TAA1 can be controlled by phosphorylation of residue T101, which, when phosphorylated results in loss of activity. TAA1 is a target of TMK4.","TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1 (TAA1)","TRANSPORT INHIBITOR RESPONSE 2 (TIR2);WEAK ETHYLENE INSENSITIVE 8 (WEI8);TRYPTOPHAN AMINOTRANSFERASE OF ARABIDOPSIS 1 (TAA1);SHADE AVOIDANCE 3 (SAV3);CYTOKININ INDUCED ROOT CURLING 1 (CKRC1)"]
["AT3G15480","black","Encodes a plant-specific protein that promotes trafficking of CSCs to the plasma membrane by facilitating exit from the TGN and/or interaction of CSC secretory vesicles with the plasma membrane.","TRANVIA (TVA)","TRANVIA (TVA)"]
["AT5G06700","black","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). A tbr mutant is impaired in its ability to deposit secondary wall cellulose in specific cell types, most notably in trichomes.","TRICHOME BIREFRINGENCE (TBR)","TRICHOME BIREFRINGENCE (TBR)"]
["AT5G64470","black","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","TRICHOME BIREFRINGENCE-LIKE 12 (TBL12)","TRICHOME BIREFRINGENCE-LIKE 12 (TBL12)"]
["AT4G25360","black","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","TRICHOME BIREFRINGENCE-LIKE 18 (TBL18)","TRICHOME BIREFRINGENCE-LIKE 18 (TBL18)"]
["AT4G23790","black","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. Functions as a mannan O-acetyltransferase, catalyzing the 2-O and 3-O-monoacetylation of mannosyl residues.A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","TRICHOME BIREFRINGENCE-LIKE 24 (TBL24)","TRICHOME BIREFRINGENCE-LIKE 24 (TBL24);MANNAN O-ACETYLTRANSFERAS 2 (MOAT2)"]
["AT1G01430","black","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers.Functions as a mannan O-acetyltransferase, catalyzing the 2-O and 3-O-monoacetylation of mannosyl residues A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). Phosphatidylinositol 4-phosphate 5-kinase (PIP5K) enzyme family member.","TRICHOME BIREFRINGENCE-LIKE 25 (TBL25)","TRICHOME BIREFRINGENCE-LIKE 25 (TBL25);MANNAN O-ACETYLTRANSFERASE 3 (MOAT3)"]
["AT1G29050","black","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","TRICHOME BIREFRINGENCE-LIKE 38 (TBL38)","TRICHOME BIREFRINGENCE-LIKE 38 (TBL38)"]
["AT3G62390","black","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","TRICHOME BIREFRINGENCE-LIKE 6 (TBL6)","TRICHOME BIREFRINGENCE-LIKE 6 (TBL6)"]
["AT1G19835","black","TCS1 encodes a coiled-coil domain protein that binds to microtubules and co-localizes with the cortical microtubules. Mutants have defects in trichome branching and hypocotyl elongation. TCS1 interacts with ZWI and appears to be involved in microtubule assembly.","TRICHOME CELL SHAPE 1 (TCS1)","TRICHOME CELL SHAPE 1 (TCS1)"]
["AT1G19800","black","Encodes a permease-like protein involved in lipid transfer from the ER to the chloroplast, more specifically, transfer of phosphatidate across the chloroplast inner membrane. Mutant leaves accumulate trigalactosyldiacylglycerol, triacylglycerol and phosphatidate. Chloroplast lipids are altered in their fatty acid composition and as a consequence the development of chloroplasts in the mutants are impacted. The mutant seeds has a higher abortion rate. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.","ATP-BINDING CASSETTE I14 (ABCI14)","TRIGALACTOSYLDIACYLGLYCEROL 1 (TGD1);ATP-BINDING CASSETTE I14 (ABCI14)"]
["AT1G68720","black","Encodes the chloroplastic A-to-I tRNA editing tRNA adenosine deaminase arginine involved in chloroplast protein translation.","TRNA ARGININE ADENOSINE DEAMINASE (TADA)","TRNA ARGININE ADENOSINE DEAMINASE (TADA);ARABIDOPSIS THALIANA TRNA ADENOSINE DEAMINASE A (ATTADA);RNA ARGININE ADENOSINE DEAMINAS (TADA1);DROUGHT INHIBITION OF LATERAL ROOT GROWTH 5 (DIG5)"]
["AT5G24650","black","HP30/Tric1 is a component of the mitochondrial protein translocation complex and is involved in tRNA transport along with HP30-2/Tric2.It interacts with several members of the TOM complex such as TOM40 and this interaction is mediated by the SAM domain. Role in protein import into chloroplasts.","HYPOTHETICAL PROTEIN 30-2 (HP30-2)","TRNA IMPORT COMPONENT 2 (Tric2);HYPOTHETICAL PROTEIN 30-2 (HP30-2)"]
["AT3G56120","black","tRNA methyltransferase acting on guanine-37 and inosine-37.","TRNA METHYLTRANSFERASE 5A (TRM5A)","TRNA METHYLTRANSFERASE 5A (TRM5A); (ATTRM5A)"]
["AT5G07350","black","RNA binding protein with nuclease activity essential for stress response. Involved in mechanisms acting on mRNAs entering the secretory pathway. Functionally redundant with TSN2.","TUDOR-SN PROTEIN 1 (TUDOR1)","TUDOR-SN PROTEIN 1 (TUDOR1);ARABIDOPSIS THALIANA TUDOR-SN PROTEIN 1 (AtTUDOR1);TUDOR-SN PROTEIN 1 (TSN1)"]
["AT5G61780","black","Involved in the regulation of AtGA20ox3 expression, as well as seed germination. The mRNA is cell-to-cell mobile.","TUDOR-SN PROTEIN 2 (TUDOR2)","TUDOR-SN PROTEIN 2 (TUDOR2);TUDOR-SN PROTEIN 2 (TSN2);ARABIDOPSIS THALIANA TUDOR-SN PROTEIN 2 (AtTUDOR2)"]
["AT5G01075","black","Encodes a small ER-localized protein that is strongly expressed in seeds and regulates both embryo development and accumulation of storage compounds. At the cellular level, TWS1 is responsible for cuticle deposition on epidermal cells and organization of the endomembrane system.","TWISTED SEED1 (TWS1)","TWISTED SEED1 (TWS1)"]
["AT5G55630","black","Encodes AtTPK1 (KCO1), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK1 is targeted to the vacuolar membrane. Forms homomeric ion channels in vivo. Voltage-independent and Ca2+-activated K+ channel. Activated by 14-3-3 proteins. Vacuolar K+-conducting TPC1 and TPK1/TPK3 channels act in concert to provide for Ca2+- and voltageinduced electrical excitability to the central organelle of plant cells.","TWO PORE K CHANNEL (KCO1)","TWO PORE K CHANNEL (KCO1);TWO PORE K CHANNEL 1 (TPK1);TANDEM PORE K+ CHANNEL 1 (ATTPK1); (ATKCO1);CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 1 (KCO1)"]
["AT5G59160","black","Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers.","TYPE ONE SERINE/THREONINE PROTEIN PHOSPHATASE 2 (TOPP2)","TYPE ONE SERINE/THREONINE PROTEIN PHOSPHATASE 2 (TOPP2);PROTOPORPHYRINOGEN OXIDASE (PPO)"]
["AT1G15710","black","Plastidic arogenate dehydrogenase with minimal prephenate dehydrogenase activity. Contains a single catalytic domain.","TYRA AROGENATE DEHYDROGENASE 2 (TYRA2)","TYRA AROGENATE DEHYDROGENASE 2 (TYRA2)"]
["AT1G06960","black","Similar to U2B'. Functions in cold stress induced alternative splicing.","U2B\"-LIKE (U2BL)","U2B\"-LIKE (U2BL)"]
["AT3G46460","black","May function together with UBC7 and UBC14 in the plant READ pathway, required in plant responses to multiple stress conditions.","UBIQUITIN-CONJUGATING ENZYME 13 (UBC13)","UBIQUITIN-CONJUGATING ENZYME 13 (UBC13)"]
["AT2G24640","black","ubiquitin-specific protease 19;(source:Araport11)","UBIQUITIN-SPECIFIC PROTEASE 19 (UBP19)","UBIQUITIN-SPECIFIC PROTEASE 19 (UBP19)"]
["AT3G49810","black","Encodes a protein with E3 ubiquitin ligase activity that is involved in negative regulation of salt stress tolerance during germination.","U-BOX PROTEIN 30 (ATPUB30)","U-BOX PROTEIN 30 (ATPUB30)"]
["AT2G41060","black","Encodes one of three UBA2 genes in Arabidopsis. It is involved in the regulation of programmed cell death.","UBP1-ASSOCIATED PROTEIN 2B (UBA2B)","UBP1-ASSOCIATED PROTEIN 2B (UBA2B)"]
["AT4G30440","black","Encodes a UDP-D-glucuronate 4-epimerase involved in pectin biosynthesis in the cell wall and affects cell wall integrity and immunity to fungi and bacteria.","UDP-D-GLUCURONATE 4-EPIMERASE 1 (GAE1)","UDP-D-GLUCURONATE 4-EPIMERASE 1 (GAE1)"]
["AT1G30620","black","encodes a type-II membrane protein that catalyzes 4-epimerization of UDP-D-Xylose to UDP-L-Arabinose in vitro, the nucleotide sugar used by glycosyltransferases in the arabinosylation of cell wall polysaccharides and wall-resident proteoglycans.","MURUS 4 (MUR4)","UDP-D-XYLOSE 4-EPIMERASE 1 (UXE1);MURUS 4 (MUR4);HIGH SUGAR RESPONSE8 (HSR8)"]
["AT2G02810","black","Encodes a multitransmembrane hydrophobic protein that functions as transporter of UDP-galactose and UDP-glucose into the Golgi. Localized in the ER. Involved in the unfolded protein response, a mechanism that controls proper protein folding in the ER.","UDP-GALACTOSE TRANSPORTER 1 (UTR1)","UDP-GALACTOSE TRANSPORTER 1 (ATUTR1);UDP-GALACTOSE TRANSPORTER 1 (UTR1)"]
["AT3G46180","black","UDP-galactose transporter 5;(source:Araport11)","UDP-GALACTOSE TRANSPORTER 5 (UTR5)","UDP-GALACTOSE TRANSPORTER 5 (UTR5);UDP-GALACTOSE TRANSPORTER 5 (ATUTR5)"]
["AT4G31600","black","Encodes a Golgi-localized UDP?glucose/UDP?galactose transporter that affects lateral root emergence.","UDP-GALACTOSE TRANSPORTER 7 (UTR7)","UDP-GALACTOSE TRANSPORTER 7 (UTR7)"]
["AT1G26570","black","UDP-glucose dehydrogenase 1;(source:Araport11)","UDP-GLUCOSE DEHYDROGENASE 1 (UGD1)","UDP-GLUCOSE DEHYDROGENASE 1 (ATUGD1);UDP-GLUCOSE DEHYDROGENASE 1 (UGD1)"]
["AT5G15490","black","Encodes one of four UDP-glucose dehydrogenase UGD) genes. Mutation of this gene in combination with UGD2 leads to swollen plant cell walls and severe developmental defects associated with changes in pectic polysaccharides.","UDP-GLUCOSE DEHYDROGENASE 3 (UGD3)","UDP-GLUCOSE DEHYDROGENASE 3 (UGD3)"]
["AT4G01070","black","the glycosyltransferase (UGT72B1) is involved in metabolizing xenobiotica (chloroaniline and chlorophenole). Comparison between wild type and knock-out mutant demonstrates the central role of this gene for metabolizing chloroaniline but significantly less for chlorophenole. The glucosyltransferase preferred UDP-xylose over UDP-glucose indicating its (additional) functioning as a xylosyltransferase in planta","(GT72B1)","UDP-GLUCOSE-DEPENDENT GLUCOSYLTRANSFERASE 72 B1 (UGT72B1); (GT72B1)"]
["AT1G30530","black","The At1g30530 gene encodes a UDP-rhamnose:flavonol-3-O-rhamnosyltransferase (UGT78D1) attaching a rhamnosyl residue to the 3-O-position of the flavonols kaempferol and quercetin","UDP-GLUCOSYL TRANSFERASE 78D1 (UGT78D1)","UDP-GLUCOSYL TRANSFERASE 78D1 (UGT78D1)"]
["AT3G53520","black","Encodes a Golgi localized isoform of UDP-glucuronic acid decarboxylase. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.","UDP-GLUCURONIC ACID DECARBOXYLASE 1 (UXS1)","UDP-GLUCURONIC ACID DECARBOXYLASE 1 (UXS1)"]
["AT1G34020","black","Nucleotide-sugar transporter family protein. Can function in yeast as glucose transporter.","UDP-RHA/UDP-GAL TRANSPORTER 6 (URGT6)","UDP-RHA/UDP-GAL TRANSPORTER 6 (URGT6)"]
["AT5G05820","black","Nucleotide-sugar transporter family protein;(source:Araport11)","UDP-URONIC ACID TRANSPORTER 3 (UUAT3)","UDP-URONIC ACID TRANSPORTER 3 (UUAT3)"]
["AT2G30460","black","UXT2 is a member of the NST-KT subfamily of nucleotide/sugar transporters. It is localized to the golgi and functions as a UDP-Xyl transporter.","UDP-XYLOSE TRANSPORTER2 (UXT2)","UDP-XYLOSE TRANSPORTER2 (UXT2)"]
["AT4G02500","black","Encodes a protein with xylosyltransferase activity, which is specific for UDP-xylose as donor substrate and for oligosaccharides with a degree of polymerization >4. Although the enzyme utilizes either cellopentaose or cellohexaose, its activity is four-fold higher with cellohexaose as an acceptor compared to cellopentaose. The enzyme is able to add several xylosyl residues to the acceptor forming mono-, di- and trixylosylated polysaccharides. The mRNA is cell-to-cell mobile.","UDP-XYLOSYLTRANSFERASE 2 (XT2)","UDP-XYLOSYLTRANSFERASE 2 (TXT2);ARABIDOPSIS THALIANA UDP-XYLOSYLTRANSFERASE 2 (ATXT2); (ATXXT2);UDP-XYLOSYLTRANSFERASE 2 (XT2);XYG XYLOSYLTRANSFERASE 2 (XXT2)"]
["AT5G41150","black","Confers resistance to UV radiation. Homolog of the human xeroderma pigmentosum group F DNA repair and yeast Rad1 proteins","ULTRAVIOLET HYPERSENSITIVE 1 (UVH1)","ULTRAVIOLET HYPERSENSITIVE 1 (UVH1); (RAD1); (ATRAD1)"]
["AT2G22500","black","Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470).","UNCOUPLING PROTEIN 5 (UCP5)","UNCOUPLING PROTEIN 5 (UCP5);PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 5 (ATPUMP5);DICARBOXYLATE CARRIER 1 (DIC1)"]
["AT3G03690","black","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11)","UNFERTILIZED EMBRYO SAC 7 (UNE7)","UNFERTILIZED EMBRYO SAC 7 (UNE7)"]
["AT4G17050","black","Encodes a protein with ureidoglycine aminohydrolase activity.","UREIDOGLYCINE AMINOHYDROLASE (UGLYAH)","UREIDOGLYCINE AMINOHYDROLASE (UGLYAH)"]
["AT3G27190","black","One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.","URIDINE KINASE-LIKE 2 (UKL2)","URIDINE KINASE-LIKE 2 (UKL2);URIDINE/CYTIDINE KINASE 2 (UCK2)"]
["AT5G40870","black","Pseudouridine kinase from the PfkB family that generates 59-pseudouridine monophosphate.","URIDINE KINASE/URACIL PHOSPHORIBOSYLTRANSFERASE 1 (UK/UPRT1)","URIDINE/CYTIDINE KINASE 1 (UCK1);URIDINE KINASE/URACIL PHOSPHORIBOSYLTRANSFERASE 1 (AtUK/UPRT1);URIDINE KINASE-LIKE 1 (UKL1);URIDINE KINASE/URACIL PHOSPHORIBOSYLTRANSFERASE 1 (UK/UPRT1)"]
["AT1G55810","black","One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.","URIDINE/CYTIDINE KINASE 3 (UCK3)","URIDINE/CYTIDINE KINASE 3 (UCK3)"]
["AT2G36310","black","Encodes a cytoplasmic nucleoside hydrolase. It has the highest levels of activity with uridine followed by xanthosine. It shows little activity with inosine and none with cytidine. Mutant analyses indicate that it plays a role in purine and pyrimidine catabolism.","URIDINE-RIBOHYDROLASE 1 (URH1)","URIDINE-RIBOHYDROLASE 1 (URH1);NUCLEOSIDE HYDROLASE 1 (NSH1)"]
["AT5G45370","black","nodulin MtN21-like transporter family protein","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 1 (UMAMIT1)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 1 (UMAMIT1)"]
["AT1G01070","black","Encodes a plasma membrane-localized amino acid transporter likely involved in amino acid export in the developing seed.","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 28 (UMAMIT28)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 28 (UMAMIT28)"]
["AT5G40230","black","nodulin MtN21-like transporter family protein","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 37 (UMAMIT37)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 37 (UMAMIT37)"]
["AT5G40240","black","nodulin MtN21-like transporter family protein","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 40 (UMAMIT40)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 40 (UMAMIT40)"]
["AT3G28050","black","nodulin MtN21-like transporter family protein","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 41 (UMAMIT41)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 41 (UMAMIT41)"]
["AT5G59920","black","Isolated in a screen for UV-B insensitive mutants using a hypocotyl growth inhibition assay. Mutants are defective in a number of UV-B responses.","UV-B LIGHT INSENSITIVE 3 (ULI3)","UV-B LIGHT INSENSITIVE 3 (ULI3)"]
["AT5G02030","black","Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. Its localization to the nucleus is dependent on the coexpression of either STM or BP.","REPLUMLESS (RPL)","VAAMANA (VAN);LARSON (LSN);PENNYWISE (PNY);BEL1-LIKE HOMEODOMAIN 9 (BLH9);BELLRINGER (BLR);REPLUMLESS (RPL); (HB-6)"]
["AT3G03090","black","Encodes a vacuolar membrane-localized glucose transporter that can also transport fructose. Mutations in these gene have effects on seed germination and time to flowering.","VACUOLAR GLUCOSE TRANSPORTER 1 (VGT1)","VACUOLAR GLUCOSE TRANSPORTER 1 (AtVGT1);VACUOLAR GLUCOSE TRANSPORTER 1 (VGT1)"]
["AT1G77140","black","A peripheral membrane protein that associates with microsomal membranes, likely to function in the transport of proteins to the vacuole. It is a member of Sec1p protein family. It may be involved in the regulation of vesicle fusion reactions through interaction with t-SNAREs at the Golgi trans face.","VACUOLAR PROTEIN SORTING 45 (VPS45)","VACUOLAR PROTEIN SORTING 45 (VPS45);BFA-VISUALIZED ENDOCYTIC TRAFFICKING DEFECTIVE 2 (BEN2); (ATVPS45)"]
["AT1G17730","black","Encodes an ESCRT-related protein: CHMP1A/AT1G73030; CHMP1B/AT1G17730. CHMP1A and B mediate multivesicular body sorting of auxin carriers and are required for plant development. ESCRT: Endosomal Sorting Complexes Required For Transport machinery; CHMP: Charged Multivesicular Body Protein/Chromatin Modifying Protein.","VACUOLAR PROTEIN SORTING 46.1 (VPS46.1)","VACUOLAR PROTEIN SORTING 46.1 (VPS46.1);CHARGED MULTIVESICULAR BODY PROTEIN/CHROMATIN MODIFYING PROTEIN1B (CHMP1B)"]
["AT2G28520","black","Vacuolar proton ATPase subunit VHA-a isoform 1. Localized in the trans-Golgi network. The mRNA is cell-to-cell mobile.","VACUOLAR PROTON ATPASE A1 (VHA-A1)","VACUOLAR PROTON ATPASE A1 (VHA-A1)"]
["AT5G46510","black","Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11)","VARIATION IN COMPOUND TRIGGERED ROOT GROWTH RESPONSE-LIKE (VICTL)","VARIATION IN COMPOUND TRIGGERED ROOT GROWTH RESPONSE-LIKE (VICTL)"]
["AT3G21710","black","transmembrane protein;(source:Araport11)","VASCULAR-RELATED UNKNOWN PROTEIN 1 (VUP1)","VASCULAR-RELATED UNKNOWN PROTEIN 1 (VUP1)"]
["AT4G29260","black","VSP3 is a secreted acid phosphatase.","VEGETATIVE STORAGE PROTEIN 3 (VSP3)","VEGETATIVE STORAGE PROTEIN 3 (VSP3)"]
["AT3G24440","black","Encodes Vernalization Insensitive 3-like 1 (VIL1). VIL1 is involved in the photoperiod and vernalization of Arabidopsis by regulating expression of the related floral repressors Flowering Locus C (FLC) and Flowering Locus M (FLM). VIL1, along with VIN3 (Vernalization Insensitive 3) is necessary for the chromatin modification to FLC and FLM.","VERNALIZATION 5 (VRN5)","VERNALIZATION 5 (VRN5);VIN3-LIKE 1 (VIL1)"]
["AT1G04750","black","Encodes vesicle-associated membrane protein 7B (VAMP7B, or VAMP721). Required for cell plate formation.VAMP721 interacts with KAT1 and KC1 K+ channels, affects channel gating and suppresses the K+ current within the physiological voltage range. Post-transcriptionally regulated by CRT1/2 under ER stress.","VESICLE-ASSOCIATED MEMBRANE PROTEIN 721 (VAMP721)","VESICLE-ASSOCIATED MEMBRANE PROTEIN 7B (VAMP7B);VESICLE-ASSOCIATED MEMBRANE PROTEIN 721 (VAMP721); (ATVAMP721); (AT VAMP7B)"]
["AT2G29890","black","Encodes a ubiquitously expressed villin-like protein, whose mRNA may be alternatively processed. Villin belongs to a superfamily of actin binding proteins called the villin/gelsolin family. Animal villins are involved in actin binding. VLN1 protein co-localizes with actin filaments in several assays. VLN1 binds and bundles F-actin in a calcium-independent manner. It does not nucleate, cap or sever actin filaments and it stabilizes actin filaments, protecting them from ADF-mediated depolymerization.","VILLIN 1 (VLN1)","VILLIN 1 (VLN1)"]
["AT1G78620","black","integral membrane protein (Protein of unknown function DUF92, transmembrane);(source:Araport11)","VITAMIN E DEFICIENT6 (VTE6)","VITAMIN E DEFICIENT6 (VTE6)"]
["AT3G51310","black","Homolog of yeast retromer subunit VPS35. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.","VPS35 HOMOLOG C (VPS35C)","VPS35 HOMOLOG C (VPS35C)"]
["AT1G75500","black","An Arabidopsis thaliana homolog of Medicago truncatula NODULIN21 (MtN21). The gene encodes a plant-specific, predicted integral membrane protein and is a member of the Plant-Drug/Metabolite Exporter (P-DME) family (Transporter Classification number: TC 2.A.7.3) and the nodulin MtN21-like transporter family.","WALLS ARE THIN 1 (WAT1)","WALLS ARE THIN 1 (WAT1);USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 5 (UMAMIT5)"]
["AT4G32330","black","WDL5 is an target of EIN3 that co-localizes with cortical microtubles. It its thought to function to stabilize microtubles during ethylene induced hypocotyl elongation.","WAVE-DAMPENED 5 (WDL5)","WAVE-DAMPENED 5 (WDL5)"]
["AT2G41420","black","proline-rich family protein;(source:Araport11)","WINDHOSE 2 (WIH2)","WINDHOSE 2 (WIH2)"]
["AT4G10265","black","Member of the wound-induced polypeptide (WIP) family.","WOUND-INDUCED POLYPEPTIDE 3 (WIP3)","WOUND-INDUCED POLYPEPTIDE 3 (WIP3)"]
["AT4G10270","black","Member of the wound-induced polypeptide (WIP) family.","WOUND-INDUCED POLYPEPTIDE 4 (WIP4)","WOUND-INDUCED POLYPEPTIDE 4 (WIP4)"]
["AT1G68910","black","Encodes one of the WPP domain-interacting proteins (WIT1/AT5G11390, WIT2/AT1G68910) required for RanGAP nuclear envelope association in root tip cells. Ran GTPase plays essential roles in multiple cellular processes, including nucleocytoplasmic transport, spindle formation, and postmitotic nuclear envelope reassembly. The cytoplasmic Ran GTPase activating protein RanGAP is critical to establish a functional RanGTP/RanGDP gradient across the nuclear envelope and is associated with the outer surface of the nuclear envelope in metazoan and higher plant cells. Arabidopsis thaliana RanGAP association with the root tip nuclear envelope requires a family of likely plant-specific nucleoporins combining coiled-coil and transmembrane domains (CC-TMD) and WPP domain-interacting proteins (WIPs). WIT1 and WIT2 have been identified as a second family of CC-TMD proteins, structurally similar, yet clearly distinct from the WIP family, that is required for RanGAP nuclear envelop association in root tip cells.","WPP DOMAIN-INTERACTING PROTEIN 2 (WIT2)","WPP DOMAIN-INTERACTING PROTEIN 2 (WIT2)"]
["AT1G69310","black","Encodes WRKY57, a member of the WRKY Transcription Factor. Activation of WRKY57 confers drought tolerance.","WRKY DNA-BINDING PROTEIN 57 (WRKY57)","WRKY DNA-BINDING PROTEIN 57 (WRKY57); (AtWRKY57)"]
["AT3G23280","black","Encodes a ubiquitin ligase that is a novel player in ethylene signaling involved in negatively regulating apical hook curvature, with alternative splicing controlling dual targeting to the nuclear and cytoplasmic compartments.","XB3 ORTHOLOG 5 IN ARABIDOPSIS THALIANA (XBAT35)","XB3 ORTHOLOG 5 IN ARABIDOPSIS THALIANA (XBAT35)"]
["AT1G15470","black","WD40 nucleoplasmic shuttling protein that positively regulates the Abscisic acid (ABA) response by interacting with and maintaining the stability of ABI5 in the nucleus. Nuclear export of XIW1 is XPO1-dependent. Involved in regulating seed germination, primary root growth, and drought stress resistance.","XPO1-INTERACTING WD40 PROTEIN 1 (XIW1)","XPO1-INTERACTING WD40 PROTEIN 1 (XIW1)"]
["AT3G23730","black","xyloglucan endotransglucosylase/hydrolase 16;(source:Araport11)","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 16 (XTH16)","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 16 (XTH16)"]
["AT1G11545","black","xyloglucan endotransglucosylase/hydrolase 8;(source:Araport11)","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 8 (XTH8)","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 8 (XTH8)"]
["AT2G35610","black","Encodes an arabinosyltransferase that modifies extensin proteins in root hair cells.","XYLOGLUCANASE 113 (XEG113)","XYLOGLUCANASE 113 (XEG113)"]
["AT2G26580","black","plant-specific transcription factor YABBY family protein;(source:Araport11)","YABBY5 (YAB5)","YABBY5 (YAB5)"]
["AT2G37550","black","A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.","ARF-GAP DOMAIN 7 (AGD7)","YEAST PDE1 SUPPRESSOR 1 (ASP1);ARF-GAP DOMAIN 7 (AGD7)"]
["AT5G51640","black","Encodes leaf-senescence-related protein. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","YELLOW-LEAF-SPECIFIC GENE 7 (YLS7)","YELLOW-LEAF-SPECIFIC GENE 7 (YLS7);TRICHOME BIREFRINGENCE-LIKE 17 (TBL17)"]
["AT1G56590","black","Involved in vesicle trafficking between the trans -Golgi network and vacuoles.","ZIG SUPPRESSOR 4 (ZIP4)","ZIG SUPPRESSOR 4 (ZIP4);ADAPTOR PROTEIN-3 MU-ADAPTIN (AP3M)"]
["AT3G14890","black","Encodes a base excision repair protein that, together with APE2, it plays overlapping roles in the maintenance of epigenome and genome stability in plants.","ZINC 4 FINGER DNA 3'-PHOSPHOESTERASE (ZDP)","ZINC 4 FINGER DNA 3'-PHOSPHOESTERASE (ZDP)"]
["AT2G32930","black","Encodes a zinc finger protein.","ZINC FINGER NUCLEASE 2 (ZFN2)","ZINC FINGER NUCLEASE 2 (ZFN2); (ATC3H26)"]
["AT2G48020","black","Encodes a zinc transporter ZIF2. Expression of ZIF2 is regulated by alternative splicing.","ZINC-INDUCED FACILITATOR 2 (ZIF2)","ZINC-INDUCED FACILITATOR 2 (ZIF2)"]
["AT2G01210","black","ZAR1 encodes a plasma membrane localized leucine-rich repeat receptor-like kinase (LRR-RLK) that contains a putative CaM-binding domain and a G&#946;-binding motif within its intracellular kinase region. Homozygous of function mutations are embryo-lethal and fail to properly make the first asymmetric division of the zygote. ZAR1 interacts with both CaM and G&#946; in vivo and that interaction activates ZAR1 kinase activity.","ZYGOTIC ARREST 1 (ZAR1)","ZYGOTIC ARREST 1 (ZAR1); (ORPK1)"]
["AT2G29590","blue","Thioesterase superfamily protein;(source:Araport11)"]
["AT4G33700","blue","CBS domain protein (DUF21);(source:Araport11)"]
["AT5G62460","blue","RZFP is a zinc finger protein involved in mediating abiotic stress tolerance."]
["AT4G13530","blue","transmembrane protein;(source:Araport11)"]
["AT1G23970","blue","hypothetical protein (DUF626);(source:Araport11)"]
["AT1G64330","blue","myosin heavy chain-like protein;(source:Araport11)"]
["AT4G31405","blue","hypothetical protein;(source:Araport11)"]
["AT3G62500","blue","F-box protein RMF;(source:Araport11)"]
["AT4G21580","blue","oxidoreductase, zinc-binding dehydrogenase family protein;(source:Araport11)"]
["AT5G55560","blue","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G68070","blue","Zinc finger, C3HC4 type (RING finger) family protein;(source:Araport11)"]
["AT3G15920","blue","Phox (PX) domain-containing protein;(source:Araport11)"]
["AT1G07473","blue","hypothetical protein;(source:Araport11)"]
["AT3G48660","blue","transmembrane protein, putative (DUF 3339);(source:Araport11)"]
["AT1G48580","blue","nuclear localized protein;(source:Araport11)"]
["AT1G53400","blue","Ubiquitin domain-containing protein;(source:Araport11)"]
["AT1G54290","blue","Translation initiation factor SUI1 family protein;(source:Araport11)"]
["AT4G13070","blue","RNA-binding CRS1 / YhbY (CRM) domain protein;(source:Araport11)"]
["AT4G06748","blue","pseudogene of TSK-associating protein 1;(source:Araport11)"]
["AT3G04040","blue","transmembrane protein;(source:Araport11)"]
["AT5G45430","blue","Protein kinase superfamily protein;(source:Araport11)"]
["AT2G20940","blue","transmembrane protein, putative (DUF1279);(source:Araport11)"]
["AT2G25890","blue","Oleosin family protein;(source:Araport11)"]
["AT1G06380","blue","Ribosomal protein L1p/L10e family;(source:Araport11)"]
["AT2G42975","blue","myosin-G heavy chain-like protein;(source:Araport11)"]
["AT4G08455","blue","BTB/POZ domain-containing protein;(source:Araport11)"]
["AT5G03500","blue","Encodes together with its paralog MED7A a subunit of the middle module of the transcriptional co-regulator Mediator complex. Regulates genes required for normal development of etiolated seedlings."]
["AT4G38780","blue","pre-mRNA-processing-splicing factor-like protein;(source:Araport11)"]
["AT3G47910","blue","Ubiquitin carboxyl-terminal hydrolase-related protein;(source:Araport11)"]
["AT5G13560","blue","structural maintenance of chromosomes protein;(source:Araport11)"]
["AT5G03285","blue","other_RNA;(source:Araport11)"]
["AT1G77370","blue","Glutaredoxin family protein;(source:Araport11)"]
["AT1G67600","blue","Acid phosphatase/vanadium-dependent haloperoxidase-related protein;(source:Araport11)"]
["AT5G65400","blue","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT5G56420","blue","F-box/RNI-like/FBD-like domains-containing protein;(source:Araport11)"]
["AT5G11840","blue","YCF36, putative (DUF1230);(source:Araport11)"]
["AT3G16990","blue","heme oxygenase-like, multi-helical;(source:Araport11)"]
["AT1G58400","blue","Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11)"]
["AT4G13160","blue","zein-binding protein (Protein of unknown function, DUF593);(source:Araport11)"]
["AT2G21930","blue","A paternally expressed imprinted gene."]
["AT5G42330","blue","hypothetical protein;(source:Araport11)"]
["AT1G79590","blue","Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed; TGN/vacuole localized."]
["AT5G37440","blue","Chaperone DnaJ-domain superfamily protein;(source:Araport11)"]
["AT5G56910","blue","Proteinase inhibitor I25, cystatin, conserved region;(source:Araport11)"]
["AT1G15740","blue","Leucine-rich repeat family protein;(source:Araport11)"]
["AT4G21903","blue","MATE efflux family protein;(source:Araport11)"]
["AT1G65020","blue","plasma protein;(source:Araport11)"]
["AT4G04614","blue","hypothetical protein;(source:Araport11)"]
["AT5G53010","blue","calcium-transporting ATPase;(source:Araport11)"]
["AT5G48775","blue","Natural antisense transcript overlaps with AT5G48770;(source:Araport11)"]
["AT1G14930","blue","Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11)"]
["AT1G77880","blue","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT4G11790","blue","Pleckstrin homology (PH) domain superfamily protein;(source:Araport11)"]
["AT2G30100","blue","pentatricopeptide (PPR) repeat-containing protein;(source:Araport11)"]
["AT4G17616","blue","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G46730","blue","pseudogene of galacturonosyltransferase-like protein;(source:Araport11)"]
["AT1G11050","blue","Protein kinase superfamily protein;(source:Araport11)"]
["AT4G21323","blue","Subtilase family protein;(source:Araport11)"]
["AT3G51650","blue","stress response NST1-like protein;(source:Araport11)"]
["AT3G01350","blue","Major facilitator superfamily protein;(source:Araport11)"]
["AT3G09162","blue","hypothetical protein;(source:Araport11)"]
["AT1G11930","blue","Putative pyridoxal phosphate-dependent enzyme, YBL036C type;(source:Araport11)"]
["AT1G04000","blue","hypothetical protein;(source:Araport11)"]
["AT5G11970","blue","ABC family ABC transporter, putative (DUF3511);(source:Araport11)"]
["AT3G45638","blue","other_RNA;(source:Araport11)"]
["AT5G62760","blue","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT4G10330","blue","glycine-rich protein;(source:Araport11)"]
["AT2G32295","blue","EXS (ERD1/XPR1/SYG1) family protein;(source:Araport11)"]
["AT2G44430","blue","DNA-binding bromodomain-containing protein;(source:Araport11)"]
["AT1G01710","blue","acyl-CoA thioesterase II;(source:Araport11)"]
["AT5G49580","blue","Chaperone DnaJ-domain superfamily protein;(source:Araport11)"]
["AT4G32600","blue","C3H4 type zinc finger protein;(source:Araport11)"]
["AT3G47160","blue","RING/U-box superfamily protein;(source:Araport11)"]
["AT5G12100","blue","pentatricopeptide (PPR) repeat-containing protein;(source:Araport11)"]
["AT4G25180","blue","RNA polymerase III RPC4;(source:Araport11)"]
["AT3G19650","blue","cyclin-like protein;(source:Araport11)"]
["AT2G45360","blue","ankyrin repeat/KH domain protein (DUF1442);(source:Araport11)"]
["AT1G13990","blue","plant/protein;(source:Araport11)"]
["AT1G03030","blue","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT4G13280","blue","Catalyzes the conversion of farnesyl diphosphate to (Z)-gamma-bisabolene and the additional minor products E-nerolidol and alpha-bisabolol. Expressed in cortex and sub-epidermal layers of roots, leaf hydathodes and flower stigmata. Induced by wounding."]
["AT4G36960","blue","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT5G44290","blue","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G24735","blue","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT4G15563","blue","F-box-like protein;(source:Araport11)"]
["AT1G67850","blue","lysine ketoglutarate reductase trans-splicing protein (DUF707);(source:Araport11)"]
["AT1G48090","blue","calcium-dependent lipid-binding family protein;(source:Araport11)"]
["AT3G62620","blue","Encodes a protein of unknown function. Previously this protein has been annotated computationally as a sucrose-phosphatase-related protein. However, the source of this annotation can not be verified. This annotation (sucrose-phosphatase-related) has been removed."]
["AT5G23690","blue","Polynucleotide adenylyltransferase family protein;(source:Araport11)"]
["AT5G42220","blue","Ubiquitin-like superfamily protein;(source:Araport11)"]
["AT4G12670","blue","Homeodomain-like superfamily protein;(source:Araport11)"]
["AT4G36530","blue","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT5G59460","blue","scarecrow-like transcription factor 11 (SCL11);(source:Araport11)"]
["AT5G44980","blue","F-box/RNI-like/FBD-like domains-containing protein;(source:Araport11)"]
["AT1G22930","blue","T-complex protein 11;(source:Araport11)"]
["AT4G11200","blue","transposable_element_gene;(source:Araport11);similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G30370.1);(source:TAIR10)"]
["AT3G01060","blue","DUF domain plastic localized protein of unknown function.Mutants germinate faster than wt. One of the 'green cut proteins' found only in photosynthetic organisms."]
["AT5G05230","blue","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G23201","blue","GCK domain protein;(source:Araport11)"]
["AT3G10810","blue","zinc finger (C3HC4-type RING finger) family protein;(source:Araport11)"]
["AT1G05785","blue","Got1/Sft2-like vescicle transport protein family;(source:Araport11)"]
["AT2G32450","blue","Calcium-binding tetratricopeptide family protein;(source:Araport11)"]
["AT4G18740","blue","Rho termination factor;(source:Araport11)"]
["AT2G16890","blue","UDP-Glycosyltransferase superfamily protein;(source:Araport11)"]
["AT1G19485","blue","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT5G05350","blue","PLAC8 family protein;(source:Araport11)"]
["AT5G22820","blue","ARM repeat superfamily protein;(source:Araport11)"]
["AT2G38870","blue","Predicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860."]
["AT5G04170","blue","Calcium-binding EF-hand family protein;(source:Araport11)"]
["AT4G08310","blue","DNA ligase;(source:Araport11)"]
["AT5G55750","blue","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT2G42950","blue","Magnesium transporter CorA-like family protein;(source:Araport11)"]
["AT2G27790","blue","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT3G62190","blue","Chaperone DnaJ-domain superfamily protein;(source:Araport11)"]
["AT5G40970","blue","hypothetical protein (DUF 3339);(source:Araport11)"]
["AT5G64250","blue","Aldolase-type TIM barrel family protein;(source:Araport11)"]
["AT3G51440","blue","Calcium-dependent phosphotriesterase superfamily protein;(source:Araport11)"]
["AT4G13360","blue","ATP-dependent caseinolytic (Clp) protease/crotonase family protein;(source:Araport11)"]
["AT2G14520","blue","CBS domain protein (DUF21);(source:Araport11)"]
["AT4G28025","blue","hypothetical protein;(source:Araport11)"]
["AT1G33490","blue","E3 ubiquitin-protein ligase;(source:Araport11)"]
["AT4G27390","blue","transmembrane protein;(source:Araport11)"]
["AT3G11745","blue","transmembrane protein;(source:Araport11)"]
["AT5G24010","blue","Protein kinase superfamily protein;(source:Araport11)"]
["AT2G43250","blue","transmembrane protein;(source:Araport11)"]
["AT1G15060","blue","alpha/beta hydrolase family protein;(source:Araport11)"]
["AT3G22260","blue","Cysteine proteinases superfamily protein;(source:Araport11)"]
["AT1G75290","blue","encodes a protein whose sequence is similar to an isoflavone reductase"]
["AT2G01740","blue","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G02960","blue","kinetochore protein;(source:Araport11)"]
["AT5G19151","blue","hypothetical protein;(source:Araport11)"]
["AT4G25225","blue","transmembrane protein;(source:Araport11)"]
["AT4G35070","blue","SBP (S-ribonuclease binding protein) family protein;(source:Araport11)"]
["AT5G63550","blue","DEK domain-containing chromatin associated protein;(source:Araport11)"]
["AT5G05140","blue","Transcription elongation factor (TFIIS) family protein;(source:Araport11)"]
["AT1G22970","blue","cyclin-D1-binding protein;(source:Araport11)"]
["AT1G22350","blue","pseudogene of UDP-glucosyl transferase 85A5;(source:Araport11)"]
["AT1G28685","blue","Natural antisense transcript overlaps with AT1G28680;(source:Araport11)"]
["AT5G40382","blue","Cytochrome c oxidase subunit Vc family protein;(source:Araport11)"]
["AT1G02020","blue","nitroreductase family protein;(source:Araport11)"]
["AT3G47550","blue","RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11)"]
["AT3G14700","blue","SART-1 family;(source:Araport11)"]
["AT5G04520","blue","3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455);(source:Araport11)"]
["AT5G53270","blue","Seed maturation protein;(source:Araport11)"]
["AT3G27350","blue","transcriptional regulator ATRX-like protein;(source:Araport11)"]
["AT2G21720","blue","ArgH (DUF639);(source:Araport11)"]
["AT1G30090","blue","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT2G36410","blue","transcriptional activator (DUF662);(source:Araport11)"]
["AT1G72690","blue","neurofilament heavy protein;(source:Araport11)"]
["AT2G04900","blue","hypothetical protein;(source:Araport11)"]
["AT1G01420","blue","Phosphatidylinositol 4-phosphate 5-kinase (PIP5K) enzyme family member."]
["AT3G59630","blue","diphthamide synthesis DPH2 family protein;(source:Araport11)"]
["AT4G20030","blue","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT3G55430","blue","O-Glycosyl hydrolases family 17 protein;(source:Araport11)"]
["AT3G27260","blue","Kinase like protein with similarity to yeast BDF1 and human RING3 protein, which have two bromodomains GTE8 has a single bromodomain"]
["AT1G44960","blue","SNARE associated Golgi protein family;(source:Araport11)"]
["AT1G17080","blue","Ribosomal protein L18ae family;(source:Araport11)"]
["AT4G20880","blue","ethylene-responsive nuclear protein / ethylene-regulated nuclear protein (ERT2);(source:Araport11)"]
["AT5G57860","blue","Ubiquitin-like superfamily protein;(source:Araport11)"]
["AT5G05110","blue","Cystatin/monellin family protein;(source:Araport11)"]
["AT3G53830","blue","Regulator of chromosome condensation (RCC1) family protein;(source:Araport11)"]
["AT4G36210","blue","transmembrane/coiled-coil protein (DUF726);(source:Araport11)"]
["AT2G01410","blue","NHL domain-containing protein;(source:Araport11)"]
["AT1G14940","blue","Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11)"]
["AT1G21080","blue","DNAJ heat shock N-terminal domain-containing protein;(source:Araport11)"]
["AT2G36680","blue","Modifier of rudimentary (Mod(r)) protein;(source:Araport11)"]
["AT2G44200","blue","pre-mRNA splicing factor domain-containing protein;(source:Araport11)"]
["AT3G04500","blue","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT5G04235","blue","transposable_element_gene;(source:Araport11);non-LTR retrotransposon family (LINE), has a 6.2e-38 P-value blast match to GB:NP_038602 L1 repeat, Tf subfamily, member 18 (LINE-element) (Mus musculus);(source:TAIR10)"]
["AT4G34310","blue","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT5G41350","blue","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G47340","blue","F-box and associated interaction domains-containing protein;(source:Araport11)"]
["AT3G14075","blue","Mono-/di-acylglycerol lipase, N-terminal;(source:Araport11)"]
["AT5G38200","blue","Class I glutamine amidotransferase-like superfamily protein;(source:Araport11)"]
["AT5G55600","blue","Agenet and bromo-adjacent homology (BAH) domain-containing protein;(source:Araport11)"]
["AT2G09335","blue","Natural antisense transcript overlaps with AT2G42150;(source:Araport11)"]
["AT2G17695","blue","outer envelope protein;(source:Araport11)"]
["AT4G09589","blue","hypothetical protein;(source:Araport11)"]
["AT3G57020","blue","Calcium-dependent phosphotriesterase superfamily protein;(source:Araport11)"]
["AT2G42150","blue","DNA-binding bromodomain-containing protein;(source:Araport11)"]
["AT1G14090","blue","pseudogene of Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT4G03490","blue","Ankyrin repeat family protein;(source:Araport11)"]
["AT2G36220","blue","hypothetical protein;(source:Araport11)"]
["AT5G40700","blue","transcriptional regulator ATRX-like protein;(source:Araport11)"]
["AT5G55660","blue","DEK domain-containing chromatin associated protein"]
["AT1G23935","blue","apoptosis inhibitory protein;(source:Araport11)"]
["AT5G08310","blue","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G13460","blue","Encodes protein phosphatase 2A (PP2A) B'theta subunit. Targeted to peroxisomes."]
["AT2G39375","blue","hypothetical protein;(source:Araport11)"]
["AT5G13340","blue","arginine/glutamate-rich 1 protein;(source:Araport11)"]
["AT3G30380","blue","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT5G18250","blue","transmembrane protein;(source:Araport11)"]
["AT2G19930","blue","RNA-dependent RNA polymerase family protein;(source:Araport11)"]
["AT5G17360","blue","DNA ligase;(source:Araport11)"]
["AT3G22290","blue","Endoplasmic reticulum vesicle transporter protein;(source:Araport11)"]
["AT3G13780","blue","SMAD/FHA domain-containing protein;(source:Araport11)"]
["AT5G65180","blue","ENTH/VHS family protein;(source:Araport11)"]
["AT3G06340","blue","DNAJ heat shock N-terminal domain-containing protein;(source:Araport11)"]
["AT4G09340","blue","SPla/RYanodine receptor (SPRY) domain-containing protein;(source:Araport11)"]
["AT5G59450","blue","GRAS family transcription factor;(source:Araport11)"]
["AT3G26730","blue","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G01240","blue","transmembrane protein;(source:Araport11)"]
["AT3G63340","blue","kinase superfamily protein;(source:Araport11)"]
["AT1G75510","blue","Transcription initiation factor IIF, beta subunit;(source:Araport11)"]
["AT1G78590","blue","Encodes a NADH kinase which can synthesize NADPH from NADH; also utilizes NAD+ as substrate although NADH is the preferred substrate."]
["AT3G05685","blue","Cystatin/monellin superfamily protein;(source:Araport11)"]
["AT2G13290","blue","beta-1,4-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT3G25495","blue","pseudogene of leucine-rich repeat protein"]
["AT1G32710","blue","Cytochrome c oxidase, subunit Vib family protein;(source:Araport11)"]
["AT4G13400","blue","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT1G31175","blue","cytochrome C oxidase biogenesis Cmc1-like protein;(source:Araport11)"]
["AT2G04520","blue","Nucleic acid-binding, OB-fold-like protein;(source:Araport11)"]
["AT5G57815","blue","Cytochrome c oxidase, subunit Vib family protein;(source:Araport11)"]
["AT2G18780","blue","F-box and associated interaction domains-containing protein;(source:Araport11)"]
["AT4G18680","blue","delay of germination protein;(source:Araport11)"]
["AT2G03810","blue","18S pre-ribosomal assembly protein gar2-like protein;(source:Araport11)"]
["AT5G64230","blue","1,8-cineole synthase;(source:Araport11)"]
["AT5G37400","blue","hypothetical protein (DUF577);(source:Araport11)"]
["AT3G51100","blue","altered inheritance of mitochondria protein;(source:Araport11)"]
["AT1G13810","blue","Restriction endonuclease, type II-like superfamily protein;(source:Araport11)"]
["AT5G13390","blue","Required for normal pollen development and lipid accumulation within the tapetum"]
["AT3G15260","blue","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT4G24590","blue","RING finger protein;(source:Araport11)"]
["AT1G68220","blue","aerobic coproporphyrinogen-III oxidase (DUF1218);(source:Araport11)"]
["AT4G32750","blue","transmembrane protein;(source:Araport11)"]
["AT5G38040","blue","UDP-Glycosyltransferase superfamily protein;(source:Araport11)"]
["AT2G43235","blue","phosphoribosylformylglycinamidine synthase;(source:Araport11)"]
["AT5G11680","blue","classical AGP protein;(source:Araport11)"]
["AT5G52580","blue","RabGAP/TBC domain-containing protein;(source:Araport11)"]
["AT5G04090","blue","histidine-tRNA ligase;(source:Araport11)"]
["AT1G13820","blue","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT1G05060","blue","coiled-coil protein;(source:Araport11)"]
["AT3G59840","blue","allyl alcohol dehydrogenase-like protein;(source:Araport11)"]
["AT2G31130","blue","hypothetical protein;(source:Araport11)"]
["AT5G12190","blue","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT1G60610","blue","SBP (S-ribonuclease binding protein) family protein;(source:Araport11)"]
["AT5G42450","blue","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G25560","blue","DNAJ heat shock N-terminal domain-containing protein;(source:Araport11)"]
["AT1G75490","blue","encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought."]
["AT3G20170","blue","ARM repeat superfamily protein;(source:Araport11)"]
["AT5G18630","blue","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT1G21065","blue","secondary thiamine-phosphate synthase enzyme;(source:Araport11)"]
["AT5G41800","blue","Transmembrane amino acid transporter family protein;(source:Araport11)"]
["AT3G10300","blue","Calcium-binding EF-hand family protein;(source:Araport11)"]
["AT3G07910","blue","reactive oxygen species modulator-like protein;(source:Araport11)"]
["AT4G16765","blue","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT5G05400","blue","LRR and NB-ARC domains-containing disease resistance protein;(source:Araport11)"]
["AT4G30390","blue","UDP-arabinopyranose mutase;(source:Araport11)"]
["AT1G53790","blue","F-box and associated interaction domains-containing protein;(source:Araport11)"]
["AT4G31510","blue","major centromere autoantigen B-like protein;(source:Araport11)"]
["AT2G43580","blue","Chitinase family protein;(source:Araport11)"]
["AT4G01790","blue","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11)"]
["AT1G67420","blue","Zn-dependent exopeptidases superfamily protein;(source:Araport11)"]
["AT5G12010","blue","nuclease;(source:Araport11)"]
["AT5G49430","blue","WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein;(source:Araport11)"]
["AT1G05710","blue","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)"]
["AT3G15352","blue","Encodes protein similar to yeast COX17, a copper-binding protein that mediates the delivery of Cu to the mitochondria for the assembly of a functional cytochrome oxidase complex."]
["AT3G51450","blue","Calcium-dependent phosphotriesterase superfamily protein;(source:Araport11)"]
["AT4G28550","blue","Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11)"]
["AT5G62370","blue","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G52230","blue","hypothetical protein;(source:Araport11)"]
["AT1G63720","blue","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT3G23540","blue","Potential heat-priming associated target of ATAF1."]
["AT5G41960","blue","zinc finger matrin-type protein;(source:Araport11)"]
["AT3G28155","blue","hypothetical protein;(source:Araport11)"]
["AT1G77540","blue","Encodes a H3/H4 histone acetyltransferase. Belongs to the GNAT family, whose many members are involved in histone acetylation and chromatin remodeling, and are important for the regulation of cell growth and development."]
["AT1G30475","blue","hypothetical protein;(source:Araport11)"]
["AT4G31860","blue","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT5G11870","blue","Alkaline phytoceramidase (aPHC);(source:Araport11)"]
["AT5G42960","blue","outer envelope pore 24B-like protein;(source:Araport11)"]
["AT5G55670","blue","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT1G23950","blue","hypothetical protein (DUF626);(source:Araport11)"]
["AT3G53490","blue","valine-tRNA ligase;(source:Araport11)"]
["AT5G38220","blue","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT2G31240","blue","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G02990","blue","hypothetical protein;(source:Araport11)"]
["AT5G66600","blue","electron transporter, putative (Protein of unknown function, DUF547);(source:Araport11)"]
["AT5G42560","blue","Abscisic acid-responsive (TB2/DP1, HVA22) family protein;(source:Araport11)"]
["AT1G47970","blue","nucleolin;(source:Araport11)"]
["AT3G50040","blue","hypothetical protein;(source:Araport11)"]
["AT5G65495","blue","hypothetical protein;(source:Araport11)"]
["AT2G38880","blue","Encodes a transcription factor from the nuclear factor Y (NF-Y) family, AtNF-YB1. Confers drought tolerance."]
["AT1G06645","blue","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT2G37670","blue","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT5G39410","blue","Saccharopine dehydrogenase;(source:Araport11)"]
["AT2G02370","blue","SNARE associated Golgi protein family;(source:Araport11)"]
["AT5G18640","blue","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT5G01030","blue","enolase, putative (DUF3527);(source:Araport11)"]
["AT1G48970","blue","NagB/RpiA/CoA transferase-like superfamily protein;(source:Araport11)"]
["AT3G50940","blue","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT3G58760","blue","Integrin-linked protein kinase family;(source:Araport11)"]
["AT2G29065","blue","GRAS family transcription factor;(source:Araport11)"]
["AT3G11810","blue","transmembrane protein;(source:Araport11)"]
["AT4G37440","blue","hypothetical protein;(source:Araport11)"]
["AT3G04020","blue","hypothetical protein;(source:Araport11)"]
["AT3G17365","blue","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT5G40470","blue","RNI-like superfamily protein;(source:Araport11)"]
["AT3G43520","blue","Transmembrane proteins 14C;(source:Araport11)"]
["AT5G49990","blue","Xanthine/uracil permease family protein;(source:Araport11)"]
["AT1G27385","blue","phosphoribosylformylglycinamidine synthase;(source:Araport11)"]
["AT5G16200","blue","50S ribosomal protein-like protein;(source:Araport11)"]
["AT5G47710","blue","Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11)"]
["AT3G57910","blue","D111/G-patch domain-containing protein;(source:Araport11)"]
["AT5G18450","blue","encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought."]
["AT2G07080","blue","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 5.0e-74 P-value blast match to gb|AAG52949.1| gag/pol polyprotein (Endovir1-1) (Arabidopsis thaliana) (Ty1_Copia-family);(source:TAIR10)"]
["AT3G46980","blue","Encodes an inorganic phosphate transporter (PHT4;3)."]
["AT5G26610","blue","D111/G-patch domain-containing protein;(source:Araport11)"]
["AT3G02490","blue","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G01850","blue","Aldolase-type TIM barrel family protein;(source:Araport11)"]
["AT4G38552","blue","Natural antisense transcript overlaps with AT4G38550;(source:Araport11)"]
["AT1G80400","blue","RING/U-box superfamily protein;(source:Araport11)"]
["AT5G57480","blue","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT1G62350","blue","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G63840","blue","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G29357","blue","Natural antisense transcript overlaps with AT1G29355;(source:Araport11)"]
["AT5G25520","blue","SPOC domain / Transcription elongation factor S-II protein;(source:Araport11)"]
["AT1G28560","blue","Encodes a protein similar to human SNAP50. Mutants display different temperature sensitivities in the dedifferentiation of cells from different organs. Mutation inhibits the dedifferentiation-associated accumulation of U-snRNAs and some other small RNA species encoded by independent-type genes carrying the USE and TATA box. Required for the elevation of cell proliferation competence in hypocotyl dedifferentiation."]
["AT1G49390","blue","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT5G45790","blue","Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11)"]
["AT3G14920","blue","Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A protein;(source:Araport11)"]
["AT4G10750","blue","Phosphoenolpyruvate carboxylase family protein;(source:Araport11)"]
["AT4G27350","blue","membrane lipoprotein lipid attachment site-like protein, putative (DUF1223);(source:Araport11)"]
["AT3G45900","blue","Ribonuclease P protein subunit P38-like protein;(source:Araport11)"]
["AT4G27680","blue","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT5G17210","blue","transmembrane protein, putative (DUF1218);(source:Araport11)"]
["AT4G29490","blue","Metallopeptidase M24 family protein;(source:Araport11)"]
["AT4G31354","blue","This gene encodes a small protein and has either evidence of transcription or purifying selection. The mRNA is cell-to-cell mobile."]
["AT1G04830","blue","Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11)"]
["AT1G64180","blue","intracellular protein transport protein USO1-like protein;(source:Araport11)"]
["AT5G13810","blue","Glutaredoxin family protein;(source:Araport11)"]
["AT4G22740","blue","glycine-rich protein;(source:Araport11)"]
["AT4G28600","blue","encodes a calmodulin-binding protein that is expressed in pollen, suspension culture cells, flowers, and fruits."]
["AT4G30780","blue","ATP-dependent DNA helicase;(source:Araport11)"]
["AT5G52070","blue","Agenet domain-containing protein;(source:Araport11)"]
["AT5G02590","blue","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G13590","blue","hypothetical protein;(source:Araport11)"]
["AT3G11165","blue","hypothetical protein;(source:Araport11)"]
["AT2G22690","blue","zinc ion binding protein;(source:Araport11)"]
["AT3G06240","blue","F-box family protein;(source:Araport11)"]
["AT4G08110","blue","transposable_element_gene;(source:Araport11);CACTA-like transposase family (Ptta/En/Spm), has a 4.2e-66 P-value blast match to At5g29026.1/8-244 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana);(source:TAIR10)"]
["AT5G56190","blue","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT5G61640","blue","ubiquitous enzyme that repairs oxidatively damaged proteins"]
["AT1G73400","blue","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G20880","blue","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT5G19900","blue","PRLI-interacting factor;(source:Araport11)"]
["AT4G00750","blue","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT4G15420","blue","Ubiquitin fusion degradation UFD1 family protein;(source:Araport11)"]
["AT1G19397","blue","transmembrane protein;(source:Araport11)"]
["AT1G61780","blue","postsynaptic protein-like protein;(source:Araport11)"]
["AT2G20410","blue","RNA-binding ASCH domain protein;(source:Araport11)"]
["AT5G38730","blue","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G26920","blue","Ubiquitin-associated/translation elongation factor EF1B protein;(source:Araport11)"]
["AT5G66580","blue","PADRE protein."]
["AT2G40020","blue","Nucleolar histone methyltransferase-related protein;(source:Araport11)"]
["AT1G44770","blue","elongation factor;(source:Araport11)"]
["AT5G37070","blue","hypothetical protein (Protein of unknown function, DUF538);(source:Araport11)"]
["AT5G35930","blue","AMP-dependent synthetase and ligase family protein;(source:Araport11)"]
["AT1G68080","blue","2-oxoglutarate-dependent dioxygenase"]
["AT4G29850","blue","transmembrane protein (DUF872);(source:Araport11)"]
["AT4G31570","blue","nucleoporin;(source:Araport11)"]
["AT3G57120","blue","Protein kinase superfamily protein;(source:Araport11)"]
["AT5G42690","blue","transcription factor, putative (Protein of unknown function, DUF547);(source:Araport11)"]
["AT2G27480","blue","Calcium-binding EF-hand family protein;(source:Araport11)"]
["AT1G16540","blue","Encodes molybdenum cofactor sulfurase. Involved in Moco biosynthesis. Involved in the conversion of ABA-aldehyde to ABA, the last step of abscisic acid (ABA) biosynthesis. <i>sir</i> loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.N terminal domain is similar to bacterial NifS suggesting a common mechanism for sulphur mobilization and transfer. Also involved in protein import into chloroplasts."]
["AT3G44730","blue","kinesin-like protein 1;(source:Araport11)"]
["AT1G75980","blue","Single hybrid motif superfamily protein;(source:Araport11)"]
["AT1G55280","blue","Lipase/lipooxygenase, PLAT/LH2 family protein;(source:Araport11)"]
["AT1G33615","blue","None;(source:Araport11)"]
["AT1G11360","blue","Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)"]
["AT1G09027","blue","None;(source:Araport11)"]
["AT3G13277","blue","other_RNA;(source:Araport11)"]
["AT2G18090","blue","PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein;(source:Araport11)"]
["AT4G26980","blue","RNI-like superfamily protein;(source:Araport11)"]
["AT1G05120","blue","One of two paralogs of yeast RAD1, the other being At1g02670. Both are expressed throughout plant growth with RAD16 as the dominant transcript. Mutants show increased sensitivity to UV."]
["AT3G15180","blue","ARM repeat superfamily protein;(source:Araport11)"]
["AT5G10730","blue","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT1G72175","blue","E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232);(source:Araport11)"]
["AT1G27000","blue","GRIP/coiled-coil protein, putative (DUF1664);(source:Araport11)"]
["AT3G50880","blue","DNA glycosylase superfamily protein;(source:Araport11)"]
["AT5G57123","blue","hypothetical protein;(source:Araport11)"]
["AT1G01500","blue","Erythronate-4-phosphate dehydrogenase family protein;(source:Araport11)"]
["AT5G06950","blue","Transcription factor of the B-ZIP family that has high affinity for C-box motifs. Interacts with NPR1 and may regulate PR gene expression. Phosphorylated by a CK2-like protein in vitro. Phosphorylation is enhanced by salicylic acid treatment. Under stress conditions, it acts to negatively control SA accumulation. that induce the hormone production.","(AHBP-1B)","(AHBP-1B);TGACG SEQUENCE-SPECIFIC BINDING PROTEIN 2 (TGA2); (ATTGA2)"]
["AT4G14710","blue","RmlC-like cupins superfamily protein;(source:Araport11)","(ATARD2)","(ATARD2)"]
["AT3G61710","blue","Encodes autophagy protein 6 (ATG6), required for pollen germination and plant development.","AUTOPHAGY 6 (ATG6)","(ATATG6);AUTOPHAGY 6 (ATG6);BECLIN1 (BECLIN1); (AtBECLIN1);VACUOLAR PROTEIN SORTING 30 (VPS30)"]
["AT1G26400","blue","FAD-binding Berberine family protein;(source:Araport11)","(ATBBE5)","(ATBBE5); (DT-77)"]
["AT5G65780","blue","Encodes a chloroplast branched-chain amino acid aminotransferase, can complement the yeast leu/iso-leu/val auxotrophy mutant. Note that the AT5G65780.2 gene model (TAIR10) has been obsoleted due to the lack of experimental support. The mRNA is cell-to-cell mobile.","(ATBCAT-5)","(ATBCAT-5)"]
["AT5G01490","blue","Encodes a cation/proton antiporter, a member of low affinity calcium antiporter CAX2 family. Involved in root development under metal stress.","CATION EXCHANGER 4 (CAX4)","(ATCAX4);CATION EXCHANGER 4 (CAX4)"]
["AT3G58580","blue","Encodes a protein that is involved in mRNA processing and localized to cytoplasmic p-bodies. Double mutants with CCR4a show decreased sensitivity to high concentrations of sucrose. Involved in starch and sucrose metabolism.","(ATCCR4B)","(ATCCR4B)"]
["AT2G44350","blue","encodes a mitochrondrion targeted citrate synthase, the first enzyme of the tricarboxylic acid cycle, catalyzing the condensation of acetyl-CoA and oxaloacetate, finally yielding citrate and CoA.","(ATCS)","(ATCS);CITRATE SYNTHASE 4 (CSY4)"]
["AT3G24880","blue","Encodes a nuclear localized protein of unknown function that interacts with components of the NuA4 histone acetyltransferase complex. I","(ATEAF1A)","(ATEAF1A)"]
["AT3G24870","blue","NuA4 accessory subunit","(ATEAF1B)","(ATEAF1B)"]
["AT4G24990","blue","geranylgeranylated protein ATGP4","(ATGP4)","(ATGP4); (MUB3)"]
["AT4G18800","blue","Encodes RabA1d, a member of the RabA subfamily of small Rab GTPases.","RAB GTPASE HOMOLOG A1D (RABA1d)","(ATHSGBP); (ATRAB11B);RAB GTPASE HOMOLOG A1D (ATRABA1D);RAB GTPASE HOMOLOG A1D (RABA1d)"]
["AT5G52200","blue","Encodes an inhibitor of protein phosphatase one (PP1).","INHIBITOR-2 (I-2)","(AtI-2);INHIBITOR-2 (I-2)"]
["AT1G28210","blue","DnaJ homolog AtJ1 (atj)","(ATJ1)","(ATJ1); (ATDJB1)"]
["AT5G15270","blue","RNA-binding KH domain-containing protein;(source:Araport11)","(ATKH25)","(ATKH25)"]
["AT5G46190","blue","RNA-binding KH domain-containing protein;(source:Araport11)","(ATKH26)","(ATKH26)"]
["AT2G33580","blue","Encodes a putative LysM-containing receptor-like kinase. LYK5 is a major chitin receptor and forms a chitin-induced complex with related kinase CERK1. Based on protein sequence alignment analysis, it was determined as a pseudo kinase due to a lack of the ATP-binding P-loop in the kinase domain.","LYSM-CONTAINING RECEPTOR-LIKE KINASE 5 (LYK5)","(ATLYK5);LYSM-CONTAINING RECEPTOR-LIKE KINASE 5 (LYK5)"]
["AT5G65430","blue","member of 14-3-3 proteins. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1","GENERAL REGULATORY FACTOR 8 (GRF8)","(ATMIN10);GENERAL REGULATORY FACTOR 8 (GRF8)"]
["AT2G03620","blue","Transmembrane magnesium transporter. One of nine family members.","MAGNESIUM TRANSPORTER 3 (MGT3)","(AtMRS2-5);MAGNESIUM TRANSPORTER 3 (MGT3); (MRS2-5); (AtMGT3)"]
["AT2G39000","blue","Encodes a chloroplast localized n-acetyltransfefase involved in N-terminal protein amino acid acetylation.","(ATNAA70)","(ATNAA70);GCN5&#8208;RELATED N&#8208;ACETYLTRANSFERASE 4 (GNAT4)"]
["AT3G62880","blue","Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family.","(ATOEP16-4)","(ATOEP16-4)"]
["AT4G17170","blue","member of RAB gene family","RAB GTPASE HOMOLOG B1C (RABB1C)","(ATRABB1C); (ATRAB2A); (RAB2A);RAB GTPASE HOMOLOG B1C (RABB1C);ARABIDOPSIS RAB GTPASE HOMOLOG B1B (ATRAB-B1B);RAB GTPASE HOMOLOG B1B (RAB-B1B); (AT-RAB2)"]
["AT1G77570","blue","Winged helix-turn-helix transcription repressor DNA-binding. Expressed in pollen and mutants show enlarged pollen grain nucleoli.","RESTRICTED TO NUCLEOLUS 1 (REN1)","(ATREN1);RESTRICTED TO NUCLEOLUS 1 (REN1)"]
["AT4G27470","blue","Encodes a RING finger E3 ubiquitin ligase.","RING MEMBRANE-ANCHOR 3 (RMA3)","(ATRMA3);RING MEMBRANE-ANCHOR 3 (RMA3)"]
["AT1G03550","blue","Secretory carrier membrane protein (SCAMP) family protein;(source:Araport11)","SECRETORY CARRIER MEMBRANE PROTEIN 4 (SCAMP4)","(ATSCAMP4);SECRETORY CARRIER MEMBRANE PROTEIN 4 (SCAMP4)"]
["AT1G79200","blue","Encodes a nuclear localized protein involved in auxin-dependent control of cell proliferation in pistil development. Loss of function mutations have increased cell proliferation in the stigma.","STIGMA/STYLE CELL-CYCLE INHIBITOR 1 (SCI1)","(ATSCI1);STIGMA/STYLE CELL-CYCLE INHIBITOR 1 (SCI1)"]
["AT2G17640","blue","Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. Expression is induced after long-term sulfur starvation.","(ATSERAT3;1)","(ATSERAT3;1);SERINE ACETYLTRANSFERASE 106 (SAT-106)"]
["AT4G00250","blue","STKL2 is a DUF domain containing DNA binding protein that may be involved in mediating certain glucose responses. Binds to promoter of PGR, a putative plasma membrane glucose response regulator.","(ATSTKL2)","(ATSTKL2)"]
["AT2G36740","blue","DNA binding protein SWC2;(source:Araport11)","(SWC2)","(ATSWC2); (SWC2)"]
["AT3G08690","blue","ubiquitin-conjugating enzyme 11;(source:Araport11)","UBIQUITIN-CONJUGATING ENZYME 11 (UBC11)","(ATUBC11);UBIQUITIN-CONJUGATING ENZYME 11 (UBC11)"]
["AT3G49660","blue","Encodes a structural core component of a COMPASS-like H3K4 histone methylation complex.","HUMAN WDR5 (WD40 REPEAT) HOMOLOG A (WDR5a)","(AtWDR5a);HUMAN WDR5 (WD40 REPEAT) HOMOLOG A (WDR5a)"]
["AT4G16430","blue","bHLH3 interacts with JAZ proteins, and functions redundantly with bHLH13, bHLH14 and bHLH17 to negatively regulate jasmonate responses.","JASMONATE ASSOCIATED MYC2 LIKE 3 (JAM3)","(BHLH03); (BHLH3);JASMONATE ASSOCIATED MYC2 LIKE 3 (JAM3); (BHLH003)"]
["AT2G41130","blue","Encodes STC8 (salt tolerant callus 8)/bHLH106 (basic helix-loop-helix transcription factor bHLH106). Knockout lines are more sensitive to NaCl, KCl, LiCl, ABA, and low temperatures than the wild-type.","(BHLH106)","(BHLH106);SALT TOLERANT CALLUS 8 (STC8)"]
["AT2G42270","blue","Similar to yeast Brr2p DEAD/DExH box ATP-dependent RNA helicase.","(BRR2B)","(BRR2B)"]
["AT1G59510","blue","Encodes CF9.","(CF9)","(CF9)"]
["AT3G43230","blue","FYVE domain-containing protein; autophagy adaptor that directly interacts with the autophagosome marker ATG8 and localizes on both membranes of the autophagosome.","(CFS1)","(CFS1); (FYVE2)"]
["AT3G24200","blue","FAD-dependent monooxygenase which complements a yeast ubiquinone biosynthetic mutant lacking C-5; behaves as a strict C-5 hydroxylase in complementation assays.","(COQ6)","(COQ6)"]
["AT1G19140","blue","Isoprenoid-lipid-binding protein; required for efficient CoQ biosynthesis.","(COQ9)","(COQ9)"]
["AT2G37150","blue","RING domain E3 ligase. Suppresses immune response by targeting RPS2 for degradation.","(CTL10)","(CTL10);MUTANT SNC1 ENHANCING 16 (MUSE16)"]
["AT1G17130","blue","DUF572 domain protein involved in alternative splicing.","(CWC16B)","(CWC16B)"]
["AT1G64900","blue","Encodes cytochrome P450 (CYP89A2). The mRNA is cell-to-cell mobile.","CYTOCHROME P450, FAMILY 89, SUBFAMILY A, POLYPEPTIDE 2 (CYP89A2)","(CYP89);CYTOCHROME P450, FAMILY 89, SUBFAMILY A, POLYPEPTIDE 2 (CYP89A2)"]
["AT4G27120","blue","ER-resident adaptor protein. Part of complex with C53 and UFL1, the E3 ligase that mediates ufmylation. Involved in the pathway that links ribosome-associated quality control with selective autophagy at the ER.","(DDRGK1)","(DDRGK1)"]
["AT3G02030","blue","transferase;(source:Araport11)","(ELT6)","(ELT6)"]
["AT4G32620","blue","Polycomb related protein that is part of a protein complex involved in histone deacetylation and heterochromatin silencing.","(EPCR1)","(EPCR1)"]
["AT1G22190","blue","The gene encodes a putative transcription factor belongings to the abiotic stress-associated DREB A-6 clade. The mRNA is cell-to-cell mobile.","RELATED TO AP2 4 (RAP2.4)","(ERF58);RELATED TO AP2.4D (RAP2.4D); (WIND2);OAS HIGH ACCUMULATION 1 (OSH1);RELATED TO AP2 4 (RAP2.4)"]
["AT4G37390","blue","Encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin. May function as a negative component in auxin signaling by regulating auxin activity.","(BRU6)","(GH3.2); (BRU6); (GH3-2);AUXIN UPREGULATED 3 (AUR3);YADOKARI 1 (YDK1)"]
["AT3G49880","blue","glycosyl hydrolase family protein 43;(source:Araport11)","(GH43B)","(GH43B)"]
["AT3G14130","blue","Aldolase-type TIM barrel family protein;(source:Araport11)","(HAOX1)","(HAOX1)"]
["AT2G28720","blue","Histone superfamily protein;(source:Araport11)","(HTB3)","(HTB3)"]
["AT3G24810","blue","Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. A member of seven KRP genes found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization.","(ICK3)","(ICK3);KIP-RELATED PROTEIN 5 (KRP5)"]
["AT2G47350","blue","HIT zinc finger and PAPA-1-like domain-containing protein;(source:Araport11)","(IES2A)","(IES2A)"]
["AT5G66160","blue","Encodes a receptor homology region transmembrane domain, ring H2 motif protein involved in transport of storage proteins to protein storage vacuoles. Localized to endoplasmic reticulum and co-localizes with DIP positive vesicles and to the trans-golgi network when complexed with RMR2.","RECEPTOR HOMOLOGY REGION TRANSMEMBRANE DOMAIN RING H2 MOTIF PROTEIN 1 (RMR1)","(JR700);RECEPTOR HOMOLOGY REGION TRANSMEMBRANE DOMAIN RING H2 MOTIF PROTEIN 1 (RMR1);ARABIDOPSIS THALIANA RECEPTOR HOMOLOGY REGION TRANSMEMBRANE DOMAIN RING H2 MOTIF PROTEIN 1 (ATRMR1)"]
["AT4G10920","blue","Transcriptional co-activator. Forms homodimers or heterodimers with the kiwi protein. Both proteins are involved in gene activation during pathogen defense and plant development.","(KELP)","(KELP); (NMDM2)"]
["AT5G41910","blue","Mediator complex, subunit Med10;(source:Araport11)","(MED10A)","(MED10A)"]
["AT1G55080","blue","mediator of RNA polymerase II transcription subunit-like protein;(source:Araport11)","(MED9)","(MED9)"]
["AT5G24870","blue","Ubiquitin E3 ligase, works with WDL7 in module which regulates microtubule disassembly to mediate stomatal closure in response to drought stress and ABA treatment. MREL57 interacts with, ubiquitinates and degrades WDL7, effect is enhanced by ABA.","(CTL07)","(MREL57); (CTL07)"]
["AT1G16010","blue","Transmembrane magnesium transporter. One of nine family members.","MAGNESIUM TRANSPORTER 2 (MGT2)","(MRS2-1); (AtMGT2); (AtMRS2-1);MAGNESIUM TRANSPORTER 2 (MGT2)"]
["AT4G00290","blue","Encodes a non-selective mechanosensitive ion channel localized to the inner mitochondrial membrane.","(MSL1)","(MSL1)"]
["AT1G62010","blue","Mitochondrial transcription termination factor family protein;(source:Araport11)","(MTERF14)","(MTERF14)"]
["AT5G09250","blue","Encodes a nuclear protein similar to the transcriptional co-activator (KIWI).Mutants show defects in pollen development, specifically the intine layer of the pollen wall. Widely expressed throughout but most highly expressed in pollen and pistil.","(NMDM1)","(NMDM1)"]
["AT5G55850","blue","Member of the RIN4-like/NOI family; upregulated after spider mite feeding.","(NOI)","(NOI4); (NOI)"]
["AT3G59600","blue","One of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II, IV and V; homologous to budding yeast RPB8. Probably redundant with At1g54250.","(NRPB8B)","(NRPB8B); (NRPD8B); (NRPE8B)"]
["AT1G11475","blue","Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB10.","(NRPB10)","(NRPE10); (NRPB10); (NRPD10)"]
["AT1G76940","blue","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)","(NSRA)","(NSRA)"]
["AT1G50260","blue","N-terminal-transmembrane-C2 domain type 5.1;(source:Araport11)","N-TERMINAL-TRANSMEMBRANE-C2 DOMAIN TYPE 5.1 (NTMC2T5.1)","(NTMC2TYPE5.1);N-TERMINAL-TRANSMEMBRANE-C2 DOMAIN TYPE 5.1 (NTMC2T5.1)"]
["AT3G14590","blue","Ca2+-dependent lipid-binding protein","(NTMC2T6.2)","(NTMC2TYPE6.2); (NTMC2T6.2)"]
["AT3G51620","blue","PAP/OAS1 substrate-binding domain superfamily;(source:Araport11)","(NTP6)","(NTP6)"]
["AT5G51740","blue","Mitochondrial ATP-independent protease. Important for maintenance of proper function of the oxphos system.","(OMA1)","(OMA1)"]
["AT5G03030","blue","Chaperone DnaJ-domain superfamily protein;(source:Araport11)","(PAM18-3)","(PAM18-3)"]
["AT1G15940","blue","One of 5 PO76/PDS5 cohesion cofactor orthologs of Arabidopsis.","(PDS5E)","(PDS5E); (ATPDS5E)"]
["AT3G27110","blue","PGM48 is a member of a plant specific clade of metallo-endopeptidase proteins. It is found in plastoglobules. Analysis of over-expression and loss of function phenotypes suggests PGM48 may have a role in positively regulating senescence.","(PGM48)","(PGM48)"]
["AT5G59400","blue","Paralog of PGRL1AB; appears to function with those proteins to regulate PGR5 levels. PGRL2 seems to destabilize PGR5 but it's effect is muted in the presence of PGRL1AB.","(PGRL2)","(PGRL2)"]
["AT4G10955","blue","alpha/beta-Hydrolases superfamily protein;(source:Araport11)","(PRLIP9)","(PRLIP9)"]
["AT4G12610","blue","transcription initiation factor IIF subunit alpha RAP74;(source:Araport11)","(RAP74)","(RAP74); (ATRAP74)"]
["AT5G41170","blue","Associated with a QTL for cytoplasmic male sterility in Sha X Cvi-0 population with the Cvi-0 promoting male sterility.","(RFL24)","(RFL24)"]
["AT1G67800","blue","Copine (Calcium-dependent phospholipid-binding protein) family;(source:Araport11)","(RGLG5)","(RGLG5)"]
["AT5G09920","blue","Non-catalytic subunit specific to DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB4)","(NRPB4)","(RPB15.9); (ATRPB15.9); (RPB15.9.9); (NRPB4)"]
["AT5G02580","blue","mRNA expression activated by PIFs by directly binding to promoter; overexpression causes pale leaves. Disrupts the homodimerization of GLK1 by interacting with its dimerization domain and debilitates the DNA-binding activity of GLK1. RPGE-GLK regulatory pairs regulate photosynthetic gene expression downstream of PIFs.","(RPGE1)","(RPGE1)"]
["AT2G03280","blue","O-fucosyltransferase family protein;(source:Araport11)","(RRT3)","(RRT3)"]
["AT4G11740","blue","Isolated as a suppressor of a dominant mutant in the Ara4 gene that was expressed in yeast ypt1 mutant strains. A novel protein with a small region of similarity to coil-coiled domain of yeast VSP27 protein.","(SAY1)","(SAY1)"]
["AT4G14600","blue","BET1-like SNARE that presumably operates in the later stacks of the Golgi; member of the SFT1 clade.","(SFT11)","(SFT11)"]
["AT2G22090","blue","encodes a nuclear protein that binds to RNA with a specificity for oligouridylates in vitro. As with UBP1, transient overexpression of UBA1a in protoplasts increases the steady-state levels of reporter mRNAs in a promoter-dependent manner. Along with UBP1 and UBA2a, it may act as a component of a complex recognizing U-rich sequences in plant 3'-UTRs and contributing to the stabilization of mRNAs in the nucleus.","(UBA1A)","(UBA1A)"]
["AT1G65650","blue","Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1;(source:Araport11)","(UCH2)","(UCH2)"]
["AT1G54110","blue","SNARE protein","(USE11)","(USE11)"]
["AT4G00170","blue","Plant VAMP (vesicle-associated membrane protein) family protein;(source:Araport11)","(VAP27-6)","(VAP27-6)"]
["AT2G06530","blue","SNF7 family protein;(source:Araport11)","(VPS2.1)","(VPS2.1)"]
["AT4G05000","blue","Vacuolar protein sorting-associated protein VPS28 family protein;(source:Araport11)","(VPS28-2)","(VPS28-2)"]
["AT3G53120","blue","Modifier of rudimentary (Mod(r)) protein;(source:Araport11)","(VPS37-1)","(VPS37-1)"]
["AT5G04850","blue","SNF7 family protein;(source:Araport11)","(VPS60.2)","(VPS60.2)"]
["AT5G01730","blue","Encodes a member of the SCAR family.These proteins are part of a complex (WAVE) complex.The SCAR subunit activates the ARP2/3 complex which in turn act as a nucleator for actin filaments.","SCAR FAMILY PROTEIN 4 (SCAR4)","(WAVE3);SCAR FAMILY PROTEIN 4 (SCAR4); (ATSCAR4)"]
["AT3G57770","blue","Protein kinase superfamily protein;(source:Araport11)","(ZRK7)","(ZRK7)"]
["AT5G53000","blue","PP2A-associated protein with a possible function in the chilling response","2A PHOSPHATASE ASSOCIATED PROTEIN OF 46 KD (TAP46)","2A PHOSPHATASE ASSOCIATED PROTEIN OF 46 KD (TAP46)"]
["AT1G51965","blue","Encodes ABA Overly-Sensitive5 (ABO5), a pentatricopeptide repeat protein required for cis-splicing of mitochondrial nad2 intron 3. Involved in response to abscisic acid.","ABA OVERLY-SENSITIVE 5 (ABO5)","ABA OVERLY-SENSITIVE 5 (ABO5)"]
["AT1G08780","blue","ABI3-interacting protein 3;(source:Araport11)","ABI3-INTERACTING PROTEIN 3 (AIP3)","ABI3-INTERACTING PROTEIN 3 (AIP3);PREFOLDIN 4 (PFD4)"]
["AT3G19290","blue","bZIP transcription factor with specificity for abscisic acid-responsive elements (ABRE). Mediates ABA-dependent stress responses.ABF4 acts through SnRK2 pathway and binds to ABA response elements of the promoters of NYE1 and regulates their expression to promote chlorophyll degradation.","ABRE BINDING FACTOR 4 (ABF4)","ABRE BINDING FACTOR 4 (ABF4); (ATAREB2)"]
["AT1G64810","blue","Encodes a chloroplast localized RNA binding protein that is involved in group II intron splicing. Splicing defects can account for the loss of photosynthetic complexes in apo1 mutants.","ACCUMULATION OF PHOTOSYSTEM ONE 1 (APO1)","ACCUMULATION OF PHOTOSYSTEM ONE 1 (APO1)"]
["AT2G36840","blue","Encodes a ACT domain-containing protein. The ACT domain, named after bacterial aspartate kinase, chorismate mutase and TyrA (prephenate dehydrogenase), is a regulatory domain that serves as an amino acid-binding site in feedback-regulated amino acid metabolic enzymes.","ACT DOMAIN REPEATS 10 (ACR10)","ACT DOMAIN REPEATS 10 (ACR10)"]
["AT5G53470","blue","Encodes an acyl-CoA binding protein that is localized to vesicles,and plasma membrane especially in epidermal cells of heart, torpedo and cotyledon stage embryos, cell wall of the seed coat. Northern blot analysis showed that the 1.4 kb ACBP1 mRNA was expressed in silique, root, stem, leaf and flower.","ACYL-COA BINDING PROTEIN 1 (ACBP1)","ACYL-COA BINDING PROTEIN 1 (ACBP1); (ATACBP1);ACYL-COA BINDING PROTEIN (ACBP)"]
["AT4G27780","blue","Encodes acyl-CoA-binding protein with ankyrin repeats The mRNA is cell-to-cell mobile.","ACYL-COA BINDING PROTEIN 2 (ACBP2)","ACYL-COA BINDING PROTEIN 2 (ACBP2); (ATACBP2)"]
["AT4G28390","blue","Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).","ADP/ATP CARRIER 3 (AAC3)","ADP/ATP CARRIER 3 (AAC3); (ATAAC3)"]
["AT5G37680","blue","A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARL GTPases.","ADP-RIBOSYLATION FACTOR-LIKE A1A (ARLA1A)","ADP-RIBOSYLATION FACTOR-LIKE 8C (ARL8C);ADP-RIBOSYLATION FACTOR-LIKE A1A (ARLA1A);ADP-RIBOSYLATION FACTOR-LIKE A1A (ATARLA1A)"]
["AT5G65060","blue","MADS domain protein - flowering regulator that is closely related to FLC","MADS AFFECTING FLOWERING 3 (MAF3)","AGAMOUS-LIKE 70 (AGL70);MADS AFFECTING FLOWERING 3 (MAF3); (FCL3)"]
["AT1G77120","blue","Catalyzes the reduction of acetaldehyde using NADH as reductant. Requires zinc for activity. Dimer. Anaerobic response polypeptide (ANP). Fermentation. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. The mRNA is cell-to-cell mobile.","ALCOHOL DEHYDROGENASE 1 (ADH1)","ALCOHOL DEHYDROGENASE 1 (ADH1);ALCOHOL DEHYDROGENASE (ADH);ARABIDOPSIS THALIANA ALCOHOL DEHYDROGENASE (ATADH); (ATADH1)"]
["AT2G02470","blue","Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins that acts as a novel upstream regulator of root hair formation during Pi starvation. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7).","ALFIN-LIKE 6 (AL6)","ALFIN-LIKE 6 (AL6)"]
["AT1G76130","blue","alpha-amylase, putative / 1,4-alpha-D-glucan glucanohydrolase, putative, strong similarity to alpha-amylase GI:7532799 from (Malus x domestica);contains Pfam profile PF00128: Alpha amylase, catalytic domain. Predicted to be secreted based on SignalP analysis.","ALPHA-AMYLASE-LIKE 2 (AMY2)","ALPHA-AMYLASE-LIKE 2 (AMY2);ARABIDOPSIS THALIANA ALPHA-AMYLASE-LIKE 2 (ATAMY2)"]
["AT5G10940","blue","ASG2 is farnesylated protein and this post-translational modification impacts its subcellular localization. It is the homolog of the human anti-obesity factor WDTC1 and is involved in the negative regulation of fatty acid biosynthesis. The non-farnesylated form displays a nucleo-cytosolic subcellular localization. The farnesylated form displays a cytosolic subcellular localization. Interaction with At4g05420 (DDB1a) was shown using BiFC approach.","ALTERED SEED GERMINATION 2 (ASG2)","ALTERED SEED GERMINATION 2 (ASG2)"]
["AT3G03210","blue","Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein;(source:Araport11)","ALTERED XYLOGLUCAN 9 (AXY9)","ALTERED XYLOGLUCAN 9 (AXY9)"]
["AT2G29990","blue","alternative NAD(P)H dehydrogenase 2;(source:Araport11)","ALTERNATIVE NAD(P)H DEHYDROGENASE 2 (NDA2)","ALTERNATIVE NAD(P)H DEHYDROGENASE 2 (NDA2)"]
["AT5G44240","blue","Expression is upregulated in the shoot of cax1/cax3 mutant. The mRNA is cell-to-cell mobile.","AMINOPHOSPHOLIPID ATPASE 2 (ALA2)","AMINOPHOSPHOLIPID ATPASE 2 (ALA2)"]
["AT3G13670","blue","MUT9-like protein kinase. Contributes to phosphorylation of photoexcited CRY2. Interaction with CRY2 occurs via the non catalytic PPKC domain.MLK4 phosphorylates the conserved H2A serine 95 residue. Synthetic mutants that cannot phosphorylate H2AS95 fail to complement the late flowering phenotype suggesting that MLK4 promotes long day flowering via phosphorylation.MLK4 is required for H2A295 phosphorylation of GI.","PHOTOREGULATORY PROTEIN KINASE 1 (PPK1)","ARABIDOPSIS EL1-LIKE 2 (AEL2);PHOTOREGULATORY PROTEIN KINASE 1 (PPK1);MUT9P-LIKE-KINASE 4 (MLK4)"]
["AT3G54020","blue","Inositol phosphorylceramide synthase","ARABIDOPSIS INOSITOL PHOSPHORYLCERAMIDE SYNTHASE 1 (AtIPCS1)","ARABIDOPSIS INOSITOL PHOSPHORYLCERAMIDE SYNTHASE 1 (AtIPCS1)"]
["AT2G37940","blue","Inositol phosphorylceramide synthase 2;(source:Araport11)","ARABIDOPSIS INOSITOL PHOSPHORYLCERAMIDE SYNTHASE 2 (AtIPCS2)","ARABIDOPSIS INOSITOL PHOSPHORYLCERAMIDE SYNTHASE 2 (AtIPCS2);ENHANCING RPW8-MEDIATED HR-LIKE CELL DEATH 1 (ERH1)"]
["AT2G27940","blue","RING/U-box superfamily protein;(source:Araport11)","ARABIDOPSIS T??XICOS EN LEVADURA 57 (ATL57)","ARABIDOPSIS T??XICOS EN LEVADURA 57 (ATL57)"]
["AT3G21430","blue","DNA binding protein;(source:Araport11)","ALWAYS EARLY 3 (ALY3)","ARABIDOPSIS THALIANA ALWAYS EARLY 3 (ATALY3);ALWAYS EARLY 3 (ALY3)"]
["AT3G58170","blue","Encodes a Bet1/Sft1-like SNARE protein which fully suppresses the temperature-sensitive growth defect in <i>sft1-1</i> yeast cells; however, it cannot support the deletion of the yeast BET1 gene (<i>bet1&#916;</i>).","BET1P/SFT1P-LIKE PROTEIN 14A (BS14A)","ARABIDOPSIS THALIANA BET1P/SFT1P-LIKE PROTEIN 14A (ATBS14A); (ATBET11); (BET11);BET1P/SFT1P-LIKE PROTEIN 14A (BS14A);MODIFIED TRANSPORT TO THE VACUOLE 15 (MTV15)"]
["AT3G18030","blue","flavin mononucleotide flavoprotein involved in salt and osmotic tolerance HAL3A encodes for phosphopantothenoylcysteine decarboxylase being involved in Coenzyme A biosynthesis. HAL3A is predominant over another gene with the presumably same function (HAL3B).","HAL3-LIKE PROTEIN A (HAL3A)","ARABIDOPSIS THALIANA HAL3-LIKE PROTEIN A (ATHAL3A);HAL3-LIKE PROTEIN A (HAL3A);HALOTOLERANCE DETERMINANT 3 (HAL3); (ATHAL3)"]
["AT5G54730","blue","yeast autophagy 18 F-like protein;(source:Araport11)","HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) F (G18F)","ARABIDOPSIS THALIANA HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) F (ATATG18F);HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) F (G18F);HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) F (ATG18F)"]
["AT1G07180","blue","Internal NAD(P)H dehydrogenase in mitochondria. The predicted protein sequence has high homology with other designated NAD(P)H DHs from microorganisms; the capacity for matrix NAD(P)H oxidation via the rotenone-insensitive pathway is significantly reduced in the Atndi1 mutant plant line; the in vitro translation product of AtNDI1 is imported into isolated mitochondria and located on the inside of the inner membrane.","ALTERNATIVE NAD(P)H DEHYDROGENASE 1 (NDA1)","ARABIDOPSIS THALIANA INTERNAL NON-PHOSPHORYLATING NAD ( P ) H DEHYDROGENASE (ATNDI1);ALTERNATIVE NAD(P)H DEHYDROGENASE 1 (NDA1)"]
["AT2G38460","blue","Encodes IRON REGULATED1 (IREG1/FPN1), one of the Arabidopsis orthologs (AT2G38460/IREG1/FPN1 and AT5G03570/IREG2/FPN2) the iron efflux transporter ferroportin (FPN) identified in animals.","IRON REGULATED 1 (IREG1)","ARABIDOPSIS THALIANA IRON-REGULATED PROTEIN 1 (ATIREG1);IRON REGULATED 1 (IREG1);FERROPORTIN 1 (FPN1)"]
["AT2G42000","blue","AtMT4a is a member of Type 4 metallothionein (MT) genes. It is involved in the early develoment of the embryo and in the accumulation of metal ions especially Zn in the seeds.","ARABIDOPSIS THALIANA METALLOTHIONEIN 4A (ATMT4A)","ARABIDOPSIS THALIANA METALLOTHIONEIN 4A (ATMT4A)"]
["AT2G23620","blue","Encodes a protein shown to have carboxylesterase activity, methyl salicylate esterase activity, methyl jasmonate esterase activity, and methyl IAA esterase activity in vitro. MES1 appears to be involved in MeSA hydrolysis in planta. Expression of MES1 can restore systemic acquired resistance in SAR-deficient tobacco plants. This protein does not act on MeGA4, or MEGA9 in vitro.","METHYL ESTERASE 1 (MES1)","ARABIDOPSIS THALIANA METHYL ESTERASE 1 (ATMES1);METHYL ESTERASE 1 (MES1)"]
["AT3G08720","blue","Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins.","SERINE/THREONINE PROTEIN KINASE 2 (S6K2)","ARABIDOPSIS THALIANA PROTEIN KINASE 2 (ATPK2);SERINE/THREONINE PROTEIN KINASE 2 (S6K2);ARABIDOPSIS THALIANA SERINE/THREONINE PROTEIN KINASE 2 (ATS6K2);ARABIDOPSIS THALIANA PROTEIN KINASE 19 (ATPK19)"]
["AT5G50240","blue","L-isoaspartyl methyltransferase 2 (PIMT2)gene, alternatively spliced.","PROTEIN-L-ISOASPARTATE METHYLTRANSFERASE 2 (PIMT2)","ARABIDOPSIS THALIANA PROTEIN-L-ISOASPARTATE METHYLTRANSFERASE 2 (AtPIMT2);PROTEIN-L-ISOASPARTATE METHYLTRANSFERASE 2 (PIMT2)"]
["AT2G06510","blue","Encodes a homolog of Replication Protein A that is involved in meiosis I in pollen mother cells. rpa1a mutants have a reduced number of class I crossovers. The protein is located in chromatin-associated foci in early leptotene and can be detected in these foci until late pachytene of meiosis I.","REPLICATION PROTEIN A 1A (RPA1A)","ARABIDOPSIS THALIANA REPLICATION PROTEIN A 1A (ATRPA1A);RPA70-KDA SUBUNIT A (RPA70A);REPLICATION PROTEIN A 1A (RPA1A);ARABIDOPSIS THALIANA RPA70-KDA SUBUNIT A (ATRPA70A)"]
["AT1G01650","blue","SIGNAL PEPTIDE PEPTIDASE-LIKE 4;(source:Araport11)","SIGNAL PEPTIDE PEPTIDASE-LIKE 4 (SPPL4)","ARABIDOPSIS THALIANA SIGNAL PEPTIDE PEPTIDASE-LIKE 4 (ATSPPL4);SIGNAL PEPTIDE PEPTIDASE-LIKE 4 (SPPL4)"]
["AT1G74410","blue","RING/U-box superfamily protein;(source:Araport11)","ARABIDOPSIS TOXICOS EN LEVADURA 24 (ATL24)","ARABIDOPSIS TOXICOS EN LEVADURA 24 (ATL24)"]
["AT2G31510","blue","IBR domain-containing protein;(source:Araport11)","ARIADNE 7 (ARI7)","ARIADNE 7 (ARI7);ARABIDOPSIS ARIADNE 7 (ATARI7)"]
["AT4G11560","blue","BAH domain protein which cooperates with PHD protein AIPP2 to read H3K27me3 histone marks. The BAH-PHD bivalent histone reader complex silences a substantial subset of H3K27me3-enriched loci, including development and stress response-related genes. Responsible for preventing flowering by suppressing the expression of flowering genes. Binding of BDT1 to the H3K27me3 peptide, which is enhanced by PHD proteins, is critical for preventing early flowering.","ASI1-IMMUNOPRECIPITATED PROTEIN 3 (AIPP3)","ASI1-IMMUNOPRECIPITATED PROTEIN 3 (AIPP3);BAH DOMAIN-CONTAINING TRANSCRIPTIONAL REGULATOR 1 (BDT1);REPRESSOR OF VERNALIZATION1 (RVR1)"]
["AT1G48790","blue","associated molecule with the SH3 domain of STAM 1;(source:Araport11)","ASSOCIATED MOLECULE WITH THE SH3 DOMAIN OF STAM 1 (AMSH1)","ASSOCIATED MOLECULE WITH THE SH3 DOMAIN OF STAM 1 (AMSH1)"]
["AT4G17950","blue","AT-hook motif containing nuclear localized (AHL) DNA-binding protein; substrate of immune MAPKs. Phosphorylation regulates AHL13 protein stability and thereby its immune functions. Regulates key factors of jasmonic acid biosynthesis and signaling and affects immunity toward Pseudomonas syringae and Botrytis cinerea pathogens.","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 13 (AHL13)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 13 (AHL13)"]
["AT5G49700","blue","Putative AT-hook DNA-binding family protein;(source:Araport11)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 17 (AHL17)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 17 (AHL17)"]
["AT3G43240","blue","Interacts with CHR11, CHR17, and RTL1, several known subunits of ISWI. JA biosynthesisis is positively regulated by this chromatin remodeling complex, thereby promoting stamen filament elongation.","AT-RICH INTERACTING DOMAIN5 (ARID5)","AT-RICH INTERACTING DOMAIN5 (ARID5)"]
["AT5G04280","blue","Encodes one of the zinc finger-containing glycine-rich RNA-binding proteins involved in cold tolerance: AT3G26420 (ATRZ-1A), AT1G60650 (AtRZ-1b), AT5G04280 (AtRZ-1c). It also, along with AtRZ-1b, plays important roles in plant development, pre- mRNA splicing, and general gene expression.","RNA-BINDING GLYCINE-RICH PROTEIN B3 (RBGB3)","ATRZ-1C (AtRZ-1c);RNA-BINDING GLYCINE-RICH PROTEIN B3 (RBGB3);RZ-1C (RZ-1c)"]
["AT1G54210","blue","Autophagy protein.","AUTOPHAGY 12 A (ATG12A)","AUTOPHAGY 12 (APG12);AUTOPHAGY 12 A (ATG12A); (ATATG12)"]
["AT3G06420","blue","Autophagy protein.","AUTOPHAGY 8H (ATG8H)","AUTOPHAGY 8H (ATG8H)"]
["AT3G15580","blue","Encodes APG8, a component of autophagy conjugation pathway. Delivered to the lumens of vacuole under nitrogen-starvation condition.","AUTOPHAGY 8H (APG8H)","AUTOPHAGY 8I (ATG8I);AUTOPHAGY 8H (APG8H)"]
["AT4G30790","blue","Encodes autophagy-related 2 (ATG11)","AUTOPHAGY-RELATED 11 (ATG11)","AUTOPHAGY-RELATED 11 (ATG11)"]
["AT1G21660","blue","Chaperone DnaJ-domain superfamily protein;(source:Araport11)","AUXILIN-LIKE3 (AUXILIN-LIKE3)","AUXILIN-LIKE3 (AUXILIN-LIKE3)"]
["AT5G39720","blue","avirulence induced protein 2 like protein;(source:Araport11)","AVIRULENCE INDUCED GENE 2 LIKE PROTEIN (AIG2L)","AVIRULENCE INDUCED GENE 2 LIKE PROTEIN (AIG2L)"]
["AT1G16270","blue","kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein;(source:Araport11)","B4 RAF-LIKE PROTEIN KINASE (B4)","B4 RAF-LIKE PROTEIN KINASE (B4)"]
["AT4G17840","blue","CAAX protease self-immunity protein;(source:Araport11)","BALANCE OF CHLOROPHYLL METABOLISM 2 (BCM2)","BALANCE OF CHLOROPHYLL METABOLISM 2 (BCM2)"]
["AT3G13430","blue","RING/U-box superfamily protein;(source:Araport11)","BCA2A ZINC FINGER ATL 7 (BTL07)","BCA2A ZINC FINGER ATL 7 (BTL07)"]
["AT4G08540","blue","One of a pair of paralogs (the other is AT1G77890)that is a subunit of the lass III phosphatidylinositol 3-kinase (PI3K) complex,but is not essential for PI3P biosynthesis.","BECLIN 1-ASSOCIATED AUTOPHAGY-RELATED KEY REGULATOR 14B (ATG14B)","BECLIN 1-ASSOCIATED AUTOPHAGY-RELATED KEY REGULATOR 14B (ATG14B)"]
["AT1G62710","blue","Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteases that is expressed specifically in seeds and is essential for the proper processing of storage proteins.","BETA VACUOLAR PROCESSING ENZYME (BETA-VPE)","BETA VACUOLAR PROCESSING ENZYME (BETA-VPE); (BETAVPE);ASPARAGINYL ENDOPEPTIDASE 2 (AEP2);VACUOLAR PROCESSING ENZYME (VPE, LEGUMAIN) ISOFORM BETA (LEGbeta)"]
["AT5G16840","blue","Binds to ACD11 and fungal elicitor RxLR207. Regulates ROS mediated defense response.","BINDING PARTNER OF ACD11 1 (BPA1)","BINDING PARTNER OF ACD11 1 (BPA1)"]
["AT3G12920","blue","Encodes one of the BRGs (BOI-related gene) involved in resistance to Botrytis cinerea.","BOI-RELATED GENE 3 (BRG3)","BOI-RELATED GENE 3 (BRG3)"]
["AT3G01210","blue","ACD11 binding partner, may be involved in negative regulation of ROS-mediated defense response.","BPA1 LIKE 6 (BPL6)","BPA1 LIKE 6 (BPL6)"]
["AT1G10070","blue","Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant. Involved in cell wall development.","BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2 (BCAT-2)","BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2 (ATBCAT-2);BRANCHED-CHAIN AMINO ACID TRANSFERASE 2 (BCAT2);BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2 (BCAT-2)"]
["AT5G19000","blue","Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1), AT3G06190 (BPM2), AT2G39760 (BPM3), AT3G03740 (BPM4), AT5G21010 (BPM5) and AT3G43700 (BPM6).","BTB-POZ AND MATH DOMAIN 1 (BPM1)","BTB-POZ AND MATH DOMAIN 1 (BPM1)"]
["AT3G03740","blue","Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1), AT3G06190 (BPM2), AT2G39760 (BPM3), AT3G03740 (BPM4), AT5G21010 (BPM5) and AT3G43700 (BPM6).","BTB-POZ AND MATH DOMAIN 4 (BPM4)","BTB-POZ AND MATH DOMAIN 4 (ATBPM4);BTB-POZ AND MATH DOMAIN 4 (BPM4)"]
["AT1G31870","blue","Ortholog of yeast BUD13 RES complex protein. Functions in pre mRNA processing of RNAs expressed in embryos.","BUD SITESELECTION PROTEIN 13 (BUD13)","BUD SITESELECTION PROTEIN 13 (BUD13)"]
["AT2G46080","blue","Encodes a protein related to BYPASS1 (BPS1). Regulates production of mobile compound: bps signal.","BYPASS 2 (BPS2)","BYPASS 2 (BPS2)"]
["AT1G70790","blue","C2-domain ABA-related (CAR) protein, involved in the recruitment of ABA receptors to the plasma membrane to facilitate ABA signaling. Its stability and dynamic localization is regulated by LOT1. Phosphorylated by FER, which further regulates the interaction with lipids. RALF1-FER participates in the regulation of membrane curvature by regulating the phosphorylation of CAR9.","C2-DOMAIN ABA-RELATED 9 (CAR9)","C2-DOMAIN ABA-RELATED 9 (CAR9)"]
["AT1G70800","blue","Encodes a novel NPH3/phototropin binding factor with a calcium binding domain that negatively affects hypocotyl bending under blue light conditions in Arabidopsis thaliana and may regulate phototropism.","ENHANCED BENDING 1 (EHB1)","C2-DOMAIN ABA-RELATED6 (CAR6);ENHANCED BENDING 1 (EHB1)"]
["AT1G70810","blue","CAR protein.","C2-DOMAIN ABA-RELATED7 (CAR7)","C2-DOMAIN ABA-RELATED7 (CAR7)"]
["AT4G32820","blue","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","CALCINEURIN BINDING PROTEIN 1 (CABIN1)","CALCINEURIN BINDING PROTEIN 1 (CABIN1)"]
["AT3G23340","blue","Member of CKL gene family (CKL-C group).","CASEIN KINASE I-LIKE 10 (ckl10)","CASEIN KINASE I-LIKE 10 (ckl10)"]
["AT4G28860","blue","Member of CKL gene family (CKL-A group)","CASEIN KINASE I-LIKE 4 (ckl4)","CASEIN KINASE I-LIKE 4 (ckl4)"]
["AT1G68660","blue","ClpS1 is a member of the caseionolytic proteinase S family of N-recognins. It is involved in proteolysis in the chloroplast stroma. An arginine residue (Arg50) controls low-affinity substrate binding.","CASEINOLYTIC PROTEASE S 1 (CLPS1)","CASEINOLYTIC PROTEASE S 1 (CLPS1); (ATCLPS1)"]
["AT4G15620","blue","Uncharacterized protein family (UPF0497);(source:Araport11)","CASP-LIKE PROTEIN 1E2 (CASPL1E2)","CASP-LIKE PROTEIN 1E2 (CASPL1E2)"]
["AT2G38490","blue","member of AtCIPKs","CBL-INTERACTING PROTEIN KINASE 22 (CIPK22)","CBL-INTERACTING PROTEIN KINASE 22 (CIPK22);SNF1-RELATED PROTEIN KINASE 3.19 (SnRK3.19)"]
["AT2G33590","blue","Encodes a protein with homology to members of the dihydroflavonol-4-reductase (DFR) superfamily. The expression pattern of AtCRL1 indicates that CRL1 has a role in embryogenesis and seed germination. AtCRL1 is induced by ABA, drought and heat, and is highly expressed in seeds. The mRNA is cell-to-cell mobile.","CCR(CINNAMOYL COA:NADP OXIDOREDUCTASE)-LIKE 1 (CRL1)","CCR(CINNAMOYL COA:NADP OXIDOREDUCTASE)-LIKE 1 (CRL1); (ATCRL1)"]
["AT4G11920","blue","Encodes a putative activator of the anaphase-promoting complex/cyclosome. Promotes exit from the cell cycle and entry into the endocycle leading to endoreduplication. Mutation of this gene results in abnormal shoot apical meristem development. It likely regulates the development of meristems by indirectly interacting with WUS and CLV3.","CELL CYCLE SWITCH PROTEIN 52 A2 (CCS52A2)","CELL CYCLE SWITCH PROTEIN 52 A2 (CCS52A2);FIZZY-RELATED 1 (FZR1)"]
["AT3G04000","blue","ChlADR is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on saturated and alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. The N-terminal region of this protein directs GFP to the chloroplast where where ChlADR likely helps to maintain the photosynthetic process by detoxifying reactive carbonyls formed during lipid peroxidation. In addition, this enzyme can also reduce cis-3-hexenal, a major plant volatile compound that contributes to green leaf odor, as well as methylglyoxal in vitro. Involved in higher growth rates under elevated CO2 conditions.","CHLOROPLAST ALDEHYDE REDUCTASE (CHLADR)","CHLOROPLAST ALDEHYDE REDUCTASE (CHLADR)"]
["AT4G13010","blue","Oxidoreductase, zinc-binding dehydrogenase family protein;(source:Araport11)","CHLOROPLAST ENVELOPE QUINONE OXIDOREDUCTASE HOMOLOG (CEQORH)","CHLOROPLAST ENVELOPE QUINONE OXIDOREDUCTASE HOMOLOG (CEQORH)"]
["AT2G43950","blue","Constitutes a peptide sensitive ion channel in chloroplast outer membranes. Accumulates in germinating seeds and developing embryos.","CHLOROPLAST OUTER ENVELOPE PROTEIN 37 (OEP37)","CHLOROPLAST OUTER ENVELOPE PROTEIN 37 (OEP37);ARABIDOPSIS CHLOROPLAST OUTER ENVELOPE PROTEIN 37 (ATOEP37)"]
["AT2G25625","blue","Histone deacetylase-like protein;(source:Araport11). Induced by senescence and abiotic stresses.","CHLOROPLAST VESICULATION (CV)","CHLOROPLAST VESICULATION (CV)"]
["AT1G10500","blue","Involved in chloroplast Fe-S cluster assembly. Located in the chloroplast stroma. Expressed preferentially in green tissues.","CHLOROPLAST-LOCALIZED ISCA-LIKE PROTEIN (CPISCA)","CHLOROPLAST-LOCALIZED ISCA-LIKE PROTEIN (ATCPISCA); (ISCA);NFU PROTEINS OR A-TYPE CARRIERS (ATC) (SUFA1);CHLOROPLAST-LOCALIZED ISCA-LIKE PROTEIN (CPISCA)"]
["AT1G65380","blue","Receptor-like protein containing leucine-rich repeats. Regulates both meristem and organ development in Arabidopsis.","CLAVATA 2 (CLV2)","CLAVATA 2 (CLV2);RECEPTOR LIKE PROTEIN 10 (AtRLP10)"]
["AT5G53350","blue","CLP protease regulatory subunit CLPX mRNA, nuclear gene","CLP PROTEASE REGULATORY SUBUNIT X (CLPX)","CLP PROTEASE REGULATORY SUBUNIT X (CLPX)"]
["AT2G17870","blue","Encodes COLD SHOCK DOMAIN PROTEIN 3 (CSP3), involved in the acquisition of freezing tolerance.","COLD SHOCK DOMAIN PROTEIN 3 (CSP3)","COLD SHOCK DOMAIN PROTEIN 3 (CSP3);ARABIDOPSIS COLD SHOCK DOMAIN PROTEIN 3 (ATCSP3)"]
["AT3G50830","blue","cold acclimation protein WCOR413-like protein beta form. Transcript is not detectable.","COLD-REGULATED 413-PLASMA MEMBRANE 2 (COR413-PM2)","COLD-REGULATED 413-PLASMA MEMBRANE 2 (COR413-PM2); (ATCOR413-PM2)"]
["AT1G76060","blue","CIAF1 mitochondrial protein required for assembly of the 1000-kD complex I holoenzyme.","EMBRYO DEFECTIVE 1793 (EMB1793)","COMPLEX I ASSEMBLY FACTOR 1 (CIAF1);EMBRYO DEFECTIVE 1793 (EMB1793)"]
["AT5G03730","blue","Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed.","CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1)","CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1); (AtCTR1);SUGAR-INSENSITIVE 1 (SIS1)"]
["AT4G12290","blue","Copper amine oxidase. Induced by ABA and involved in stomatal closure.","COPPER AMINE OXIDASE (CUAO)","COPPER AMINE OXIDASE (CUAO)"]
["AT1G11530","blue","Encodes a monocysteinic thioredoxin, thioredoxin in which the second cysteine of the redox site is replaced by a serine, with low disulfide reductase but efficient disulfide isomerase activity. The mRNA is cell-to-cell mobile.","C-TERMINAL CYSTEINE RESIDUE IS CHANGED TO A SERINE 1 (CXXS1)","C-TERMINAL CYSTEINE RESIDUE IS CHANGED TO A SERINE 1 (CXXS1);C-TERMINAL CYSTEINE RESIDUE IS CHANGED TO A SERINE 1 (ATCXXS1)"]
["AT1G26830","blue","Cullin, putative, similar to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with other components of E3 ligase complex suggesting it functions in RUB-modification. Forms complexes with BTB domain proteins forming a novel class of E3-based ubiquitin protein-ligase complexes. Mutant is early flowering and has a reduced sensitivity to far-red light. cul3a/cul3b homozygous/heterozygous plants are embryo lethal.","CULLIN 3 (CUL3)","CULLIN 3A (CUL3A);CULLIN 3A (ATCUL3A);CULLIN 3 (CUL3);CULLIN 3 (ATCUL3)"]
["AT1G27630","blue","cyclin T 1;(source:Araport11)","CYCLIN T 1;3 (CYCT1;3)","CYCLIN T 1;3 (CYCT1;3)"]
["AT3G12490","blue","Encodes a protein with cysteine proteinase inhibitor activity. Overexpression increases tolerance to abiotic stressors (i.e.salt,osmotic, cold stress).","CYSTATIN B (CYSB)","CYSTATIN B (ATCYSB);CYSTATIN B (CYSB);ARABIDOPSIS THALIANA PHYTOCYSTATIN 6 (ATCYS6)"]
["AT1G05340","blue","Cysteine-rich protein of unknown function. Mutants are defective in thermotolerance and uv tolerance.","CYSTEINE-RICH TRANSMEMBRANE MODULE 1 (ATHCYSTM1)","CYSTEINE-RICH TRANSMEMBRANE MODULE 1 (ATHCYSTM1)"]
["AT4G22340","blue","Membrane localized cytidinediphosphate diacylglycerol synthase. Essential gene when combined with mutation on CDS1.","CYTIDINEDIPHOSPHATE DIACYLGLYCEROL SYNTHASE 2 (CDS2)","CYTIDINEDIPHOSPHATE DIACYLGLYCEROL SYNTHASE 2 (CDS2)"]
["AT2G45150","blue","cytidinediphosphate diacylglycerol synthase 4;(source:Araport11)","CYTIDINEDIPHOSPHATE DIACYLGLYCEROL SYNTHASE 4 (CDS4)","CYTIDINEDIPHOSPHATE DIACYLGLYCEROL SYNTHASE 4 (CDS4)"]
["AT4G10040","blue","Encodes cytochrome c. Promoter directs preferential expression in vascular tissues of cotyledons, leaves, roots, and hypocotyls, and in anthers. Double mutants with CYTC-1 accumulate starch during the day, have delayed growth and development and reduced GA and DELLA proteins linking cellular metabolism and GA homeostasis.","CYTOCHROME C-2 (CYTC-2)","CYTOCHROME C-2 (CYTC-2)"]
["AT4G15380","blue","member of CYP705A","CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 4 (CYP705A4)","CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 4 (CYP705A4)"]
["AT4G13290","blue","putative cytochrome P450","CYTOCHROME P450, FAMILY 71, SUBFAMILY A, POLYPEPTIDE 19 (CYP71A19)","CYTOCHROME P450, FAMILY 71, SUBFAMILY A, POLYPEPTIDE 19 (CYP71A19)"]
["AT3G48270","blue","putative cytochrome P450","CYTOCHROME P450, FAMILY 71, SUBFAMILY A, POLYPEPTIDE 26 (CYP71A26)","CYTOCHROME P450, FAMILY 71, SUBFAMILY A, POLYPEPTIDE 26 (CYP71A26)"]
["AT5G25180","blue","putative cytochrome P450","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 14 (CYP71B14)","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 14 (CYP71B14)"]
["AT3G14680","blue","putative cytochrome P450","CYTOCHROME P450, FAMILY 72, SUBFAMILY A, POLYPEPTIDE 14 (CYP72A14)","CYTOCHROME P450, FAMILY 72, SUBFAMILY A, POLYPEPTIDE 14 (CYP72A14)"]
["AT2G45560","blue","cytochrome P450 monooxygenase","CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 1 (CYP76C1)","CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 1 (CYP76C1)"]
["AT4G37320","blue","member of CYP81D","CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 5 (CYP81D5)","CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 5 (CYP81D5)"]
["AT1G22985","blue","encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.","CYTOKININ RESPONSE FACTOR 7 (CRF7)","CYTOKININ RESPONSE FACTOR 7 (CRF7)"]
["AT1G71130","blue","encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.","CYTOKININ RESPONSE FACTOR 8 (CRF8)","CYTOKININ RESPONSE FACTOR 8 (CRF8);ETHYLENE RESPONSE FACTOR 70 (ERF070); (ATERF070)"]
["AT1G17440","blue","Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12. The gene product is an EIN3-interacting TFIID transcription factor required for proper ethylene response, including ERF1 induction. Loss of function mutants show enhanced response to ethylene. Located in nucleus and expressed throughout the plant. Required for ERF1 expression. Cytokinin-hypersensitive 1 (CKH1) mutants are characterized by rapidly growing calli with a green color at low levels of cytokinins, which are insufficient to induce such cytokinin responses in wild-type explants. It is hypothesized that CKH1 acts as a negative regulator of cytokinin signaling in Arabidopsis.","ENHANCED ETHYLENE RESPONSE 4 (EER4)","CYTOKININ-HYPERSENSITIVE 1 (CKH1); (NOBIRO6);ENHANCED ETHYLENE RESPONSE 4 (EER4);TBP-ASSOCIATED FACTOR 12B (TAF12b)"]
["AT3G62220","blue","Cytosolic ABA receptor kinase, functions in ABA signaling.","CYTOSOLIC ABA RECEPTOR KINASE 2 (CARK2)","CYTOSOLIC ABA RECEPTOR KINASE 2 (CARK2)"]
["AT3G51510","blue","Membrane protein located in chloroplast.","DECREASED ELECTRON TRANSPORT AT PSII (DEAP2)","DECREASED ELECTRON TRANSPORT AT PSII (DEAP2)"]
["AT1G64750","blue","Involved in the maintenance of genome integrity through homologous recombination. This function of DSS1 is performed through its interaction with the BRCA2 protein.","DELETION OF SUV3 SUPPRESSOR 1(I) (DSS1(I))","DELETION OF SUV3 SUPPRESSOR 1(I) (DSS1(I))"]
["AT4G29330","blue","DERLIN-1;(source:Araport11)","DERLIN-1 (DER1)","DERLIN-1 (DER1)"]
["AT2G20900","blue","diacylglycerol kinase 5;(source:Araport11)","DIACYLGLYCEROL KINASE 5 (DGK5)","DIACYLGLYCEROL KINASE 5 (DGK5); (ATDGK5)"]
["AT1G77930","blue","Chaperone DnaJ-domain superfamily protein;(source:Araport11)","DNA J PROTEIN C65 (DJC65)","DNA J PROTEIN C65 (DJC65)"]
["AT2G42750","blue","DNAJ heat shock N-terminal domain-containing protein;(source:Araport11)","DNA J PROTEIN C77 (DJC77)","DNA J PROTEIN C77 (DJC77)"]
["AT1G66730","blue","Encodes a novel plant specific DNA ligase that is involved in seed germination and DNA repair.","DNA LIGASE 6 (LIG6)","DNA LIGASE 6 (AtLIG6);DNA LIGASE 6 (LIG6)"]
["AT1G27461","blue","Nuclear localized protein involved in osmotic stress tolerance. Transcriptional co-repressor which promotes embryonic-to-vegetative transition. Forms a feedback inhibition loop with the master transcription factorsr LEC1 and ABI3.","DROUGHT RESPONSE GENE (DRG)","DROUGHT RESPONSE GENE (DRG);SEED DORMANCY FOUR-LIKE 1 (SFL1);SEED DORMANCY 4-LIKE (SDR4L); (AITRL)"]
["AT3G05700","blue","Encodes a DNA binding protein with transcription activation activity. It is expressed in response to osmotic, drought and ABA stress.","DROUGHT-INDUCED PROTEIN19 (DIL9-3)","DROUGHT-INDUCED PROTEIN19 (DIL9-3)"]
["AT4G15880","blue","EARLY IN SHORT DAYS 4 Arabidopsis mutant shows extreme early flowering and alterations in shoot development. It encodes a SUMO protease, located predominantly at the periphery of the nucleus. Accelerates the transition from vegetative growth to flowering. Probably acts in the same pathway as NUA in affecting flowering time, vegetative and inflorescence development. The mRNA is cell-to-cell mobile.","EARLY IN SHORT DAYS 4 (ESD4)","EARLY IN SHORT DAYS 4 (ESD4); (ATESD4)"]
["AT5G51070","blue","ATP-dependent Clp protease regulatory subunit The mRNA is cell-to-cell mobile.","EARLY RESPONSIVE TO DEHYDRATION 1 (ERD1)","EARLY RESPONSIVE TO DEHYDRATION 1 (ERD1);SENESCENCE ASSOCIATED GENE 15 (SAG15); (CLPD)"]
["AT5G44150","blue","Connects together with RST1 the cytosolic RNA exosome to the Ski complex.","R RST1 INTERACTING PROTEIN (RIPR)","ECERIFERUM 16 (CER16); (CER16);R RST1 INTERACTING PROTEIN (RIPR)"]
["AT5G25350","blue","Arabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway.","EIN3-BINDING F BOX PROTEIN 2 (EBF2)","EIN3-BINDING F BOX PROTEIN 2 (EBF2)"]
["AT2G29950","blue","Member of a small family of proteins containing DUF1313 domain. Involved in flowering time.","ELF4-LIKE 1 (ELF4-L1)","ELF4-LIKE 1 (ELF4-L1);ELF4-LIKE 1 (EFL1)"]
["AT2G26830","blue","Encodes a member of a small family of choline/ethanolamine kinases that is localized to the plasma membrane. Homozygous loss of function alleles are embryo lethal. Overexpression results in altered phospholipid levels suggesting a critical role in phospholipid biosynthesis.","EMBRYO DEFECTIVE 1187 (emb1187)","EMBRYO DEFECTIVE 1187 (emb1187);CHOLINE/ETHANOLAMINE KINASE 4 (CEK4)"]
["AT3G55620","blue","Translation initiation factor IF6;(source:Araport11)","EUKARYOTIC INITIATION FACOR 6A (eIF6A)","EMBRYO DEFECTIVE 1624 (emb1624);EUKARYOTIC INITIATION FACOR 6A (eIF6A)"]
["AT1G13120","blue","nucleoporin GLE1-like protein;(source:Araport11)","(GLE1)","EMBRYO DEFECTIVE 1745 (emb1745); (GLE1);A. THALIANA HOMOLOG OF YEAST GLE1 (ATGLE1)"]
["AT4G14590","blue","embryo defective 2739;(source:Araport11)","EMBRYO DEFECTIVE 2739 (emb2739)","EMBRYO DEFECTIVE 2739 (emb2739);DEFECTIVE IN SNRNA PROCESSING 2 (DSP2)"]
["AT4G29660","blue","embryo defective 2752;(source:Araport11)","EMBRYO DEFECTIVE 2752 (EMB2752)","EMBRYO DEFECTIVE 2752 (EMB2752)"]
["AT3G23440","blue","embryo sac development arrest 6;(source:Araport11)","EMBRYO SAC DEVELOPMENT ARREST 6 (EDA6)","EMBRYO SAC DEVELOPMENT ARREST 6 (EDA6);MATERNAL EFFECT EMBRYO ARREST 37 (MEE37)"]
["AT4G24470","blue","ZIM is a putative transcription factor containing an atypical GATA-type zinc-finger motif.","ZINC-FINGER PROTEIN EXPRESSED IN INFLORESCENCE MERISTEM (ZIM)","EMBRYO-DEFECTIVE-DEVELOPMENT 1 (EDD1);ZINC-FINGER PROTEIN EXPRESSED IN INFLORESCENCE MERISTEM (ZIM); (TIFY1);GATA TRANSCRIPTION FACTOR 25 (GATA25); (ATTIFY1)"]
["AT5G13020","blue","Agenet domain containing nucleosome binding protein. Binds H3K36 sites.","EMSY-LIKE 3 (EML3)","EMSY-LIKE 3 (EML3); (AtEML3)"]
["AT3G09030","blue","EAP3 is a cytolsolic BTB/POZ-domain protein involved in trafficking of PEN3.","ENDOPLASMIC RETICULUM-ARRESTED PEN3 (EAP3)","ENDOPLASMIC RETICULUM-ARRESTED PEN3 (EAP3)"]
["AT3G03610","blue","Member of the ELMOD family.","ENGULFMENT AND CELL MOTILITY (ELMO) DOMAIN F (ELMOD_F)","ENGULFMENT AND CELL MOTILITY (ELMO) DOMAIN F (ELMOD_F);ENGULFMENT AND CELL MOTILITY (ELMO) DOMAIN E (ELMOD_E)"]
["AT5G55390","blue","Encodes EDM2 (enhanced downy mildew 2). The predicted protein bears typical features of transcriptional regulators. EDM2 contains two putative bipartite nuclear localization signals (NLS) two zinc-finger-like motifs, a Proline-rich region and a large aspartic acid-rich region. Both zinc-finger-like stretches resemble the PHD (plant homeodomain) finger motif. Mutations in EDM2 comprise RPP7 mediated resistance against Hyaloperonospora parasitica isolate Hiks1 (HpHiks1). EDM2 may function as a direct or indirect regulator of RPP7 expression.","ENHANCED DOWNY MILDEW 2 (EDM2)","ENHANCED DOWNY MILDEW 2 (EDM2)"]
["AT5G23150","blue","Putative transcription factor. Member of the floral homeotic AGAMOUS pathway.Mutations in HUA enhance the phenotype of mild ag-4 allele. Single hua mutants are early flowering and have reduced levels of FLC mRNA. Other MADS box flowering time genes such as FLM and MAF2 also appear to be regulated by HUA2. HUA2 normally activates FLC expression and enhances AG function. HUA and HUA-LIKE (HULK) genes act redundantly to regulate a subset of essential genes, with some (or all) family members also having specific functions. The mRNA is cell-to-cell mobile.","ENHANCER OF AG-4 2 (HUA2)","ENHANCER OF AG-4 2 (HUA2); (ART1);AERIAL ROSETTE 1 (ART1)"]
["AT1G66340","blue","Similar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1. Mutations in ETR1 block ethylene stimulation of flavonol synthesis.","ETHYLENE RESPONSE 1 (ETR1)","ETHYLENE RESPONSE 1 (ETR1);REDUCED DORMANCY 3 (RDO3); (RDO3);ETHYLENE RESPONSE (ETR); (AtETR1);ETHYLENE INSENSITIVE 1 (EIN1)"]
["AT1G73730","blue","Encodes a putative transcription factor involved in ethylene and sulfate starvation signalling. Isolated DNA binding domain has been shown to bind DNA in vitro.","ETHYLENE-INSENSITIVE3-LIKE 3 (EIL3)","ETHYLENE-INSENSITIVE3-LIKE 3 (EIL3);SULFUR LIMITATION 1 (SLIM1);ARABIDOPSIS THALIANA SULFUR LIMITATION 1 (ATSLIM); (AtEIL3)"]
["AT5G24910","blue","Member of CYP714A. Encodes one of the two tandemly duplicated gene pair ELA1 (CYP714A1) and ELA2 (CYP714A2), homologs of the rice cytochrome P450 monooxygenase gene EUI1. Double mutation of ELA1 and ELA2 results in increased biomass and enlarged organs.","CYTOCHROME P450, FAMILY 714, SUBFAMILY A, POLYPEPTIDE 1 (CYP714A1)","EUI-LIKE P450 A1 (ELA1);CYTOCHROME P450, FAMILY 714, SUBFAMILY A, POLYPEPTIDE 1 (CYP714A1)"]
["AT1G27960","blue","encodes a protein whose C-terminal region is similar to ECT1 and ECT2, which bind to CIPK1.","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 9 (ECT9)","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 9 (ECT9)"]
["AT5G64260","blue","EXORDIUM like 2;(source:Araport11)","EXORDIUM LIKE 2 (EXL2)","EXORDIUM LIKE 2 (EXL2)"]
["AT1G54490","blue","Involved in the ethylene response. XRN4 does not appear to regulate ethylene signaling via an RNA-INDUCED SILENCING COMPLEX-based RNA silencing mechanism but acts by independent means. Endogenous suppressor of posttranscriptional gene silencing. The mRNA is cell-to-cell mobile.","EXORIBONUCLEASE 4 (XRN4)","EXORIBONUCLEASE 4 (ATXRN4);ACC INSENSITIVE 1 (AIN1);ETHYLENE INSENSITIVE 5 (EIN5);EXORIBONUCLEASE 4 (XRN4)"]
["AT2G27380","blue","Encodes an extensin like gene involved in seed germination.","EXTENSIN PROLINE-RICH 1 (EPR1)","EXTENSIN PROLINE-RICH 1 (ATEPR1);EXTENSIN PROLINE-RICH 1 (EPR1)"]
["AT4G34390","blue","An alternative form of heterotrimeric G-protein alpha subunit.","EXTRA-LARGE GTP-BINDING PROTEIN 2 (XLG2)","EXTRA-LARGE GTP-BINDING PROTEIN 2 (XLG2)"]
["AT3G14100","blue","Triple RNA Recognition Motif protein involved in the dynamic and reversible aggregation of translationally repressed mRNAs during hypoxia.During hypoxia, UBP1C association with non? uracil-rich mRNAs is enhanced concomitant with its aggregation into microscopically visible cytoplasmic foci, referred to as UBP1 stress granules (SGs). This mRNA association occurs as global levels of protein synthesis decline during hypoxia. Upon reoxygenation, rapid UBP1 SG disaggregation coincides with the return of the stabilized mRNAs to polysomes.","F OLIGOURIDYLATE BINDING PROTEIN 1C (UBP1C)","F OLIGOURIDYLATE BINDING PROTEIN 1C (UBP1C)"]
["AT2G32250","blue","FAR1-related sequence 2;(source:Araport11)","FAR1-RELATED SEQUENCE 2 (FRS2)","FAR1-RELATED SEQUENCE 2 (FRS2)"]
["AT3G06250","blue","Transcriptional repressor that accumulates in short-day conditions. Regulates together with FRS12 and NINJA glucosinolate biosynthesis.","FAR1-RELATED SEQUENCE 7 (FRS7)","FAR1-RELATED SEQUENCE 7 (FRS7)"]
["AT1G33390","blue","Over-expression of this gene results in stem fasciation. The predicted amino acid sequence reveals the presence of two domains (DEXH-box or DEAD-box helicase and DUF1065 domain) and fragments of two more domains (HrpA domain and HA2 domain).","FASCIATED STEM 4 (FAS4)","FASCIATED STEM 4 (ATFAS4);FASCIATED STEM 4 (FAS4)"]
["AT2G26310","blue","Encodes a plastid stroma localized fatty acid binding protein.","FATTY-ACID-BINDING PROTEIN 2 (FAP2)","FATTY-ACID-BINDING PROTEIN 2 (FAP2); (ATFAP2)"]
["AT5G21040","blue","Encodes an F-box containing protein that interacts physically with BHLH32 and appears to be involved in mediating phosphate starvation responses. Its expression is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots.","F-BOX PROTEIN 2 (FBX2)","F-BOX PROTEIN 2 (FBX2)"]
["AT1G64840","blue","LOW protein: F-box/kelch-repeat protein (DUF295);(source:Araport11)","F-BOX/DUF295 ANCESTRAL 3 (ATFDA3)","F-BOX/DUF295 ANCESTRAL 3 (ATFDA3)"]
["AT3G54170","blue","Encodes protein that binds FKBP12. This interaction is disrupted by FK506 but not by cyclosporin A.FIP37 is a core component of the M6A methyltransferase complex. Homozygous loss of function mutations are embryo lethal. In the shoot meristem FIP37 methylation targets include WUS and STM.","FKBP12 INTERACTING PROTEIN 37 (FIP37)","FKBP12 INTERACTING PROTEIN 37 (ATFIP37);FKBP12 INTERACTING PROTEIN 37 (FIP37)"]
["AT5G10140","blue","MADS-box protein encoded by FLOWERING LOCUS C - transcription factor that functions as a repressor of floral transition and contributes to temperature compensation of the circadian clock. Expression is downregulated during cold treatment. Vernalization, FRI and the autonomous pathway all influence the state of FLC chromatin. Both maternal and paternal alleles are reset by vernalization, but their earliest activation differs in timing and location. Histone H3 trimethylation at lysine 4 and histone acetylation are associated with active FLC expression, whereas histone deacetylation and histone H3 dimethylation at lysines 9 and 27 are involved in FLC repression. Expression is also repressed by two small RNAs (30- and 24-nt) complementary to the FLC sense strand 3? to the polyA site. The small RNAs are most likely derived from an antisense transcript of FLC. Interacts with SOC1 and FT chromatin in vivo. Member of a protein complex.","FLOWERING LOCUS C (FLC)","FLOWERING LOCUS C (FLC);REDUCED STEM BRANCHING 6 (RSB6);AGAMOUS-LIKE 25 (AGL25);FLOWERING LOCUS F (FLF)"]
["AT1G55170","blue","DNA double-strand break repair protein;(source:Araport11)","FLX-LIKE 3 (FLL3)","FLX-LIKE 3 (FLL3)"]
["AT5G14780","blue","Encodes a NAD-dependent formate dehydrogenase.","FORMATE DEHYDROGENASE (FDH)","FORMATE DEHYDROGENASE (FDH); (ATFDH1)"]
["AT1G31810","blue","Encodes the Type II Arabidopsis formin14. Interacts with microtubules and microfilaments to regulate cell division.","FORMIN HOMOLOGY 14 (AFH14)","FORMIN HOMOLOGY 14 (AFH14); (ATFH14)"]
["AT2G06005","blue","Encodes one of the FRI interacting proteins: FRIGIDA INTERACTING PROTEIN 1 (FIP1)/At2g06005, FIP2/ At4g17060. FRI (At4G00650) is a major determinant of natural variation in Arabidopsis flowering time.","FRIGIDA INTERACTING PROTEIN 1 (FIP1)","FRIGIDA INTERACTING PROTEIN 1 (FIP1)"]
["AT1G31814","blue","Family member of FRI-related genes that is required for the winter-annual habit. Genbank accession BK004885. The functional FRL2-Ler allele is the major FRI-related gene required for FRI-mediated late flowering.","FRIGIDA LIKE 2 (FRL2)","FRIGIDA LIKE 2 (FRL2)"]
["AT1G07510","blue","encodes an FtsH protease that is localized to the mitochondrion","FTSH PROTEASE 10 (ftsh10)","FTSH PROTEASE 10 (ftsh10)"]
["AT2G26140","blue","Encodes an FtsH protease that is localized to the mitochondrion. Loss of function results in increased determinacy of the meristem that is exacerbated when plants are grown at higher temperatures.","FTSH PROTEASE 4 (ftsh4)","FTSH PROTEASE 4 (ftsh4); (ATFTSH4)"]
["AT3G47060","blue","encodes an FtsH protease that is localized to the chloroplast; Plays role in abscisic acid (ABA)-dependent pathway in response to dehydration.","FTSH PROTEASE 7 (ftsh7)","FTSH PROTEASE 7 (ftsh7); (CARK2)"]
["AT4G15940","blue","Fumarylacetoacetate hydrolase homolog; involved in seed redox regulation and to affect seed quality traits such as seed thermo-dormancy and longevity.","FUMARYLACETOACETATE HYDROLASE DOMAIN CONTAINING PROTEIN 1A (FAHD1A)","FUMARYLACETOACETATE HYDROLASE DOMAIN CONTAINING PROTEIN 1A (FAHD1A)"]
["AT1G20110","blue","Encodes a protein that is localized to the peripheral membrane of late endosomal compartments. Involved in the regulation of mulitivesicular/prevacuolar compartment protein sorting. Loss of function mutations are embryo lethal. Regulates IRT1-dependent metal transport and metal homeostasis. The mRNA is cell-to-cell mobile.","FYVE-DOMAIN PROTEIN 1 (FYVE1)","FYVE-DOMAIN PROTEIN 1 (FYVE1);PIGMENT DEFECTIVE EMBRYO 330 (PDE330);FYVE DOMAIN PROTEIN REQUIRED FOR ENDOSOMAL SORTING 1 (FREE1)"]
["AT5G55490","blue","Encodes a transmembrane domain containing protein that is expressed in pollen germ cells.","GAMETE EXPRESSED PROTEIN 1 (GEX1)","GAMETE EXPRESSED PROTEIN 1 (ATGEX1);GAMETE EXPRESSED PROTEIN 1 (GEX1)"]
["AT4G09610","blue","GAST1 protein homolog 2;(source:Araport11)","GAST1 PROTEIN HOMOLOG 2 (GASA2)","GAST1 PROTEIN HOMOLOG 2 (GASA2)"]
["AT2G20770","blue","Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor.GCL2 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase.","GCR2-LIKE 2 (GCL2)","GCR2-LIKE 2 (GCL2)"]
["AT2G34630","blue","Encodes a geranyl diphosphate synthase. RNAi lines are dwarf. T-DNA knock-out lines are embryo lethal.","GERANYL DIPHOSPHATE SYNTHASE 1 (GPS1)","GERANYLPYROPHOSPHATE SYNTHASE (GPPS);GERANYL DIPHOSPHATE SYNTHASE 1 (GPS1)"]
["AT1G73150","blue","Bromodomain and extra terminal domain family protein. Binds to acetyl-histone H3. Binding is reduced when GTE3 is SUMOylated by SIZ1.","GLOBAL TRANSCRIPTION FACTOR GROUP E3 (GTE3)","GLOBAL TRANSCRIPTION FACTOR GROUP E3 (GTE3)"]
["AT5G04500","blue","Encodes a member of the CAZy Glycosyltransferase Family 64 that is involved in glycosylinositolphosphorylceramide and sphingolipid glycosylation. In mutants, seed germination was less sensitive to salt stress than in wild-type plants. [The protein was expected to be Golgi-localized based on function as well as the Golgi localization of its homolog GMT1. However, GFP-fusion proteins localized both to the ER and Golgi, and especially to ER when co-expressed with Golgi markers. Therefore, localization cannot confidently be defined. (pers. communication, J. Mortimer)]","GLUCOSAMINE INOSITOLPHOSPHORYLCERAMIDE TRANSFERASE 1 (GINT1)","GLUCOSAMINE INOSITOLPHOSPHORYLCERAMIDE TRANSFERASE 1 (GINT1)"]
["AT5G63030","blue","Thioredoxin superfamily protein, redox sensor.","GLUTAREDOXIN C1 (GRXC1)","GLUTAREDOXIN C1 (GRXC1)"]
["AT5G40370","blue","Glutaredoxin family protein;(source:Araport11)","GLUTAREDOXIN C2 (GRXC2)","GLUTAREDOXIN C2 (GRXC2); (GRX370); (ATGRXC2)"]
["AT4G11600","blue","Encodes glutathione peroxidase. Exhibits moderate binding affinity with dinotefuran.","GLUTATHIONE PEROXIDASE 6 (GPX6)","GLUTATHIONE PEROXIDASE 6 (ATGPX6); (PHGPX); (LSC803);GLUTATHIONE PEROXIDASE 6 (GPX6); (GPXL6)"]
["AT4G31870","blue","Encodes glutathione peroxidase. Role in the degradation of H2O2 to water using glutathione as electron donor.","GLUTATHIONE PEROXIDASE 7 (GPX7)","GLUTATHIONE PEROXIDASE 7 (ATGPX7);GLUTATHIONE PEROXIDASE 7 (GPX7); (GPXL7)"]
["AT2G29460","blue","Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Role in the degradation of H2O2 to water using glutathione as electron donor","GLUTATHIONE S-TRANSFERASE TAU 4 (GSTU4)","GLUTATHIONE S-TRANSFERASE TAU 4 (ATGSTU4);GLUTATHIONE S-TRANSFERASE 22 (GST22);GLUTATHIONE S-TRANSFERASE TAU 4 (GSTU4)"]
["AT5G62480","blue","Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","GLUTATHIONE S-TRANSFERASE TAU 9 (GSTU9)","GLUTATHIONE S-TRANSFERASE TAU 9 (ATGSTU9);GLUTATHIONE S-TRANSFERASE TAU 9 (GSTU9);GLUTATHIONE S-TRANSFERASE 14B (GST14B);GLUTATHIONE S-TRANSFERASE 14 (GST14)"]
["AT4G18280","blue","Encodes a gene whose transcription is induced in response to potassium-deficiency,drought, heat and salt stress. Overexpression increases tolerance to stressors.","GLYCINE RICH CELL WALL PROTEIN LIKE 1 (GRPL1)","GLYCINE RICH CELL WALL PROTEIN LIKE 1 (GRPL1)"]
["AT2G31350","blue","Encodes a mitochondrial glyoxalase 2 that can accommodate a number of different metal centers and with the predominant metal center being Fe(III)Zn(II).","GLYOXALASE 2-5 (GLX2-5)","GLYOXALASE 2-5 (GLX2-5); (GLXII.5)"]
["AT2G32090","blue","Lactoylglutathione lyase / glyoxalase I family protein;(source:Araport11)","GLYOXALASE I-LIKE;9 (GLXI-LIKE;9)","GLYOXALASE I-LIKE;9 (GLXI-LIKE;9)"]
["AT4G27630","blue","Encodes a GPCR-type G protein receptor with nine predicted transmembrane domains. The protein binds abscisic acid (ABA) and is predicted to function as an ABA receptor. It has GTP-binding and GTPase activity and binds to ABA more effectively in the presence of GDP. GTG2 binds to GPA1, the alpha subunit of the heterotrimeric G protein. GPA1 (in its GTP-bound state) affects the GTP binding and GTPase activity of GTG2 and may act to down-regulate GTG2 binding to ABA. GTG2 is widely expressed throughout the plant and appears to be involved in the regulation of several ABA-dependent responses including seed germination, plant development, and promotion of stomatal closure. GTG2 transcript levels do not appear to change in response to ABA or abiotic stresses.","GPCR-TYPE G PROTEIN 2 (GTG2)","GPCR-TYPE G PROTEIN 2 (GTG2)"]
["AT3G47120","blue","GDS1is a member of the C3H-type zinc finger family of proteins. Mutants display growth defects due to reduced cell number and size.","GROWTH, DEVELOPMENT AND SPLICING 1 (GDS1)","GROWTH, DEVELOPMENT AND SPLICING 1 (GDS1); (ATC3H42)"]
["AT2G44100","blue","GDP dissociation inhibitor involved in vesicular membrane traffic","GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 1 (GDI1)","GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 1 (ATGDI1); (AT-GDI1);GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 1 (GDI1)"]
["AT3G10350","blue","One of 3 GET paralogs in Arabidopsis. GET3b is a chloroplast localized protein with no obvious role in Tail Anchored (TA) protein insertion.","GUIDED ENTRY OF TAIL-ANCHORED PROTEINS 3B (GET3B)","GUIDED ENTRY OF TAIL-ANCHORED PROTEINS 3B (ATGET3B);GUIDED ENTRY OF TAIL-ANCHORED PROTEINS 3B (GET3B)"]
["AT2G35230","blue","Contains a plant-specific VQ motif. Involved in endosperm growth and seed size determination. IKU1 is expressed in the early endosperm and its progenitor, the central cell.IKU1 interacts with MINI3 in the yeast two-hybrid system.","HAIKU1 (IKU1)","HAIKU1 (IKU1); (IKU1)"]
["AT4G13550","blue","Heat stress inducible plastid monogalactosyldiacylglycerol lipase.","HEAT INDUCIBLE LIPASE1 (HIL1)","HEAT INDUCIBLE LIPASE1 (HIL1)"]
["AT4G17750","blue","native protein is a trimer, interacts with HSP70, also with TBP, DNA interaction is modulated by phosphorylation and is heat-shock inducible","HEAT SHOCK FACTOR 1 (HSF1)","HEAT SHOCK FACTOR 1 (HSF1);CLASS A HEAT SHOCK FACTOR 1A (HSFA1A);ARABIDOPSIS THALIANA HEAT SHOCK FACTOR 1 (ATHSF1);ARABIDOPSIS THALIANA CLASS A HEAT SHOCK FACTOR 1A (ATHSFA1A)"]
["AT5G16820","blue","Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes.","HEAT SHOCK FACTOR 3 (HSF3)","HEAT SHOCK FACTOR 3 (HSF3);ARABIDOPSIS HEAT SHOCK FACTOR 3 (ATHSF3);ARABIDOPSIS THALIANA CLASS A HEAT SHOCK FACTOR 1B (ATHSFA1B);CLASS A HEAT SHOCK FACTOR 1B (HSFA1B)"]
["AT5G45710","blue","member of Heat Stress Transcription Factor (Hsf) family","ROOT HANDEDNESS 1 (RHA1)","HEAT SHOCK TRANSCRIPTION FACTOR A4C (AT-HSFA4C);HEAT SHOCK TRANSCRIPTION FACTOR A4C (HSFA4C);ROOT HANDEDNESS 1 (RHA1)"]
["AT4G21320","blue","Encodes heat-stress-associated 32-kD protein. Up-regulated by heat shock. Thermotolerance in a knockout mutant was compromised following a long recovery period (> 24 h) after acclimation heat shock treatment.","HEAT-STRESS-ASSOCIATED 32 (HSA32)","HEAT-STRESS-ASSOCIATED 32 (HSA32)"]
["AT5G03380","blue","Heavy metal transport/detoxification superfamily protein;(source:Araport11)","HEAVY METAL ASSOCIATED PROTEIN 43 (ATHMP43)","HEAVY METAL ASSOCIATED PROTEIN 43 (ATHMP43)"]
["AT1G63440","blue","The Arabidopsis P-type ATPase HMA5 is involved in Cu detoxification. hma5 mutant plants exhibit Cu hypersensitivity, which is especially dramatic in roots where HMA5 is mostly expressed.","HEAVY METAL ATPASE 5 (HMA5)","HEAVY METAL ATPASE 5 (HMA5);HEAVY METAL ASSOCIATED PROTEIN 12 (ATHMP12)"]
["AT1G20693","blue","Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. The mRNA is cell-to-cell mobile.","HIGH MOBILITY GROUP B2 (HMGB2)","HIGH MOBILITY GROUP B2 (HMGB2);NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP D 02 (NFD02);NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP D 2 (NFD2);HIGH MOBILITY GROUP BETA 1 (HMG BETA 1)"]
["AT4G35570","blue","Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Cannot be phosphorylated by CK2alpha.","HIGH MOBILITY GROUP B5 (HMGB5)","HIGH MOBILITY GROUP B5 (HMGB5);NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR 5 (NFD5); (HMGD); (NFD05)"]
["AT1G07430","blue","Encodes a member of the group A protein phosphatase 2C (PP2C) family that is responsible for negatively regulating seed dormancy.","HIGHLY ABA-INDUCED PP2C GENE 2 (HAI2)","HIGHLY ABA-INDUCED PP2C GENE 2 (HAI2);AKT1 INTERACTING PROTEIN PHOSPHATASE 1 (AIP1); (ATAIP1);HONSU (KOREAN FOR ABNORMAL DROWSINESS) (HON)"]
["AT5G26040","blue","Class III RPD3 type protein. Encodes HDA2, a member of the histone deacetylase family proteins.","HISTONE DEACETYLASE 2 (HDA2)","HISTONE DEACETYLASE 2 (HDA2)"]
["AT3G44680","blue","Encodes HDA9 (a RPD3-like histone deacetylase). Functions in promoting the onset of leaf senescence.The hda9 mutant shows enhanced H3K9 acetylation levels,based on immunodetection using H3K9ac antibodies. Negatively controls gene expression in concert with interacting proteins POWERDRESS (PWR), HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 15 (HOS15), WRKY53, ELONGATED HYPOCOTYL 5 (HY5), ABA INSENSITIVE 4 (ABI4) and EARLY FLOWERING 3 (ELF3). Involved in mutual negative feedback regulation with WRKY53. Mutations lead to a mild early flowering phenotype under SD.","HISTONE DEACETYLASE 9 (HDA9)","HISTONE DEACETYLASE 9 (HDA9); (HDA09); (ATHDA9);HISTONE DEACETYLASE 9 (HDAC9); (ATHDAC9)"]
["AT5G54640","blue","Isolated from T-DNA insertion line, the rat5 mutant is deficient in T-DNA integration. Encodes histone2A protein.","RESISTANT TO AGROBACTERIUM TRANSFORMATION 5 (RAT5)","HISTONE H2A 1 (HTA1); (ATHTA1);RESISTANT TO AGROBACTERIUM TRANSFORMATION 5 (RAT5)"]
["AT3G28920","blue","homeobox protein 34;(source:Araport11)","HOMEOBOX PROTEIN 34 (HB34)","HOMEOBOX PROTEIN 34 (AtHB34);HOMEOBOX PROTEIN 34 (HB34);ZINC FINGER HOMEODOMAIN 9 (ZHD9)"]
["AT3G44530","blue","Encodes a nuclear localized WD-repeat containing protein involved in negative regulation of knox gene expression via epigenetic mechanism of chromatin re-organization. It is a part of the HISTONE REGULATOR complex that deposits histones in a DNA synthesis-independent manner and affects both nucleosome occupancy and the maintenance of transcriptional silencing. Interacts physically and genetically with AS1. Expressed in meristem and leaf primordia. Homozygous mutants are embryo lethal. Phenotype of cosuppressed lines is variable but show effects on leaf development similar to as1/as2.","HOMOLOG OF HISTONE CHAPERONE HIRA (HIRA)","HOMOLOG OF HISTONE CHAPERONE HIRA (HIRA)"]
["AT1G54710","blue","autophagy 18h-like protein;(source:Araport11)","HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) H (ATG18H)","HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) H (ATATG18H);HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) H (ATG18H)"]
["AT3G27770","blue","plant/protein;(source:Araport11)","HYPOXIA RESPONSE UNKNOWN PROTEIN 53 (HUP53)","HYPOXIA RESPONSE UNKNOWN PROTEIN 53 (HUP53)"]
["AT1G72360","blue","Encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.","ETHYLENE RESPONSE FACTOR 73 (ERF73)","HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 1 (HRE1); (AtERF73);ETHYLENE RESPONSE FACTOR 73 (ERF73)"]
["AT2G32320","blue","Interacts genetically with its homolog ICA1; alters growth and flowering time plasticity in relation to temperature. Mutants display effects on growth, flowering and plant development, and ploidy level depending on ambient temperature (effects specific at >27C).","ICARUS2 (ICA2)","ICARUS2 (ICA2)"]
["AT1G33970","blue","IAN9 is a member of a small family of proteins. It's expression is repressed upon pathogen infection and loss of function mutants show increased resistance to bacterial pathogens.","IMMUNE ASSOCIATED NUCLEOTIDE BINDING 9 (IAN9)","IMMUNE ASSOCIATED NUCLEOTIDE BINDING 9 (IAN9)"]
["AT1G56140","blue","Component of a recognition mechanism for both cellulose and MLG-derived oligosaccharides perception and downstream Pattern-Triggered Immunity (PTI).","IMPAIRED IN GLYCAN PERCEPTION 4 (IGP4)","IMPAIRED IN GLYCAN PERCEPTION 4 (IGP4)"]
["AT3G13810","blue","indeterminate(ID)-domain 11;(source:Araport11)","INDETERMINATE(ID)-DOMAIN 11 (IDD11)","INDETERMINATE(ID)-DOMAIN 11 (IDD11)"]
["AT2G02080","blue","C2H2 BIRD transcription factor family.","INDETERMINATE(ID)-DOMAIN 4 (IDD4)","INDETERMINATE(ID)-DOMAIN 4 (AtIDD4);INDETERMINATE(ID)-DOMAIN 4 (IDD4);IMPERIAL EAGLE (IME)"]
["AT4G15550","blue","UDP-glucose:indole-3-acetate beta-D-glucosyltransferase","INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE (IAGLU)","INDOLE-3-ACETATE BETA-D-GLUCOSYLTRANSFERASE (IAGLU)"]
["AT2G22240","blue","** Referred to as MIPS1 in Mitsuhashi et al 2008. Myo-inositol-1-phosphate synthase isoform 2. Expressed in leaf, root and silique. Immunolocalization experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.","MYO-INOSITOL-1-PHOSPHATE SYNTHASE 2 (MIPS2)","INOSITOL 3-PHOSPHATE SYNTHASE 2 (ATIPS2);MYO-INOSITOL-1-PHOSPHATE SYNTHASE 2 (MIPS2);MYO-INOSITOL-1-PHOSPHATE SYNTHASE 1 (MIPS1);MYO-INOSITOL-1-PHOSPHATE SYNTHASE 1 (ATMIPS1);MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2 (ATMIPS2)"]
["AT1G34220","blue","ISTL1 acts with LIP5 in endosomal trafficking within the tapetum during pollen development. Mutants have reduced transmission through both male and female gametophytes.","IST1-LIKE 1 (ISTL1)","IST1-LIKE 1 (ISTL1)"]
["AT3G43440","blue","jasmonate-zim-domain protein 11;(source:Araport11)","JASMONATE-ZIM-DOMAIN PROTEIN 11 (JAZ11)","JASMONATE-ZIM-DOMAIN PROTEIN 11 (JAZ11); (TIFY3A)"]
["AT3G17860","blue","JAZs are direct targets of the SCFCOI1 E3 ubiquitin-ligase and JA treatment induces their proteasome-mediated degradation. Furthermore, JAI3 negatively regulates the key transcriptional activator of JA responses, AtMYC2. The C-terminal portion of JAZ3, including the Jas domain, appears to be important for JAZ3-COI1 binding in the presence of coronatine.","JASMONATE-ZIM-DOMAIN PROTEIN 3 (JAZ3)","JASMONATE-ZIM-DOMAIN PROTEIN 3 (JAZ3);JASMONATE-INSENSITIVE 3 (JAI3); (TIFY6B)"]
["AT5G10650","blue","JUL1 encode a RING-type E3 ubiquitin ligase that is involved in JA responses. It ubiquitinates the JAV1 jasmonic acid response repressor which is then degraded by the proteosome. Participates in ABA-mediated microtubule depolymerization, stomatal closure, and tolerance response to drought stress.","JAV1- 37 ASSOCIATED UBIQUITIN LIGASE 1 (JUL1)","JAV1- 37 ASSOCIATED UBIQUITIN LIGASE 1 (JUL1); (CTL08)"]
["AT5G06910","blue","DnaJ homologue, contains J domain which is common in all known DnaJ proteins but missing G/F domain.","J-DOMAIN PROTEIN 6 (ATJ6)","J-DOMAIN PROTEIN 6 (ATJ6)"]
["AT1G61210","blue","DWA3 encodes a DWD(DDB1 binding WD40) protein. Invitro analyses suggest its involvement in the negative regulation of ABA responses.One of four katanin p80 subunits. Involved in targeting of katanin complex to crossover and branch points to properly sever microtubules.","DWD HYPERSENSITIVE TO ABA 3 (DWA3)","KATANIN P80 SUBUNIT 2 (KTN80.2);DWD HYPERSENSITIVE TO ABA 3 (DWA3)"]
["AT3G61980","blue","Encodes a Kazal-type serine proteinase inhibitor that is highly expressed in seedlings and flowers.","KAZAL-TYPE PROTEINASE INHIBITOR 1 (KPI-1)","KAZAL-TYPE PROTEINASE INHIBITOR 1 (KPI-1); (ATKPI-1)"]
["AT3G24150","blue","hypothetical protein;(source:Araport11)","KINASE-INDUCIBLE DOMAIN INTERACTING8 (KIX8)","KINASE-INDUCIBLE DOMAIN INTERACTING8 (KIX8)"]
["AT5G16550","blue","Lipid droplet protein associated with LDAP3.","LDAP INTERACTING PROTEIN (LDIP)","LDAP INTERACTING PROTEIN (LDIP)"]
["AT3G22990","blue","Armadillo-repeat containing protein. Involved in leaf and flower development. Located in nucleus. Broadly expressed throughout vegetative and floral tissues. LFR is functionally associated with AS2 to mediate leaf development.A subunit shared by SYD- and MINU1/2-associated SWI/SNF complexes (PMID:36471048).","LEAF AND FLOWER RELATED (LFR)","LEAF AND FLOWER RELATED (LFR)"]
["AT3G03340","blue","LUC7 related protein;(source:Araport11)","LETHAL UNLESS CBC 7 A (LUC7A)","LETHAL UNLESS CBC 7 A (LUC7A)"]
["AT4G02690","blue","Stress induced membrane protein. Mutants show enhanced cell death under stress.","LIFEGUARD 3 (LFG3)","LIFEGUARD 3 (LFG3); (ATLFG3);GOLGI ANTIAPOPTOTIC PROTEIN 3 (GAAP3)"]
["AT1G76570","blue","Chlorophyll A-B binding family protein;(source:Araport11)","LIGHT-HARVESTING COMPLEX B7 (LHCB7)","LIGHT-HARVESTING COMPLEX B7 (LHCB7); (ATLHCB7)"]
["AT1G78600","blue","Light regulated B-box (zinc finger)protein.","LIGHT-REGULATED ZINC FINGER PROTEIN 1 (LZF1)","LIGHT-REGULATED ZINC FINGER PROTEIN 1 (LZF1);B-BOX DOMAIN PROTEIN 22 (BBX22)"]
["AT1G04930","blue","Member of the DREAM complex, which represses growth in response to DNA damage, LIN37 type.","LIN37 HOMOLOG A (LIN37A)","LIN37 HOMOLOG A (LIN37A)"]
["AT2G32840","blue","Member of the DREAM complex, which represses growth in response to DNA damage, LIN37 type.","LIN37 HOMOLOG B (LIN37B)","LIN37 HOMOLOG B (LIN37B)"]
["AT3G02600","blue","Encodes phosphatidic acid phosphatase. Expressed during germination.","LIPID PHOSPHATE PHOSPHATASE 3 (LPP3)","LIPID PHOSPHATE PHOSPHATASE 3 (LPP3);LIPID PHOSPHATE PHOSPHATASE 3 (ATLPP3)"]
["AT3G53410","blue","Paralog of LOG2 (At3g09770), a ubiquitin ligase that regulates amino acid export.","LOG2-LIKE UBIQUITIN LIGASE2 (LUL2)","LOG2-LIKE UBIQUITIN LIGASE2 (LUL2)"]
["AT4G16310","blue","FAD-dependent lysine-specific histone demethylase involved in the control of flowering time.","LSD1-LIKE 3 (LDL3)","LSD1-LIKE 3 (LDL3)"]
["AT5G65070","blue","Encodes MADS-box containing FLC paralog. Five splice variants have been identified but not characterized with respect to expression patterns and/or differing function. Overexpression of the gene in the Landsberg ecotype leads to a delay in flowering, transcript levels of MAF4 are reduced after a 6 week vernalization.","MADS AFFECTING FLOWERING 4 (MAF4)","MADS AFFECTING FLOWERING 4 (MAF4)"]
["AT5G24350","blue","Member of MAG2 complex on the ER that is responsible for efficient transport of seed storage proteins, functions in protein transport between the ER and Golgi apparatus, contain a Zeste?White 10 (ZW10) domain and a Sec39 domain. Required for proper maturation of seed storage proteins.","MAG2-INTERACTING PROTEIN 2 (MIP2)","MAG2-INTERACTING PROTEIN 2 (MIP2)"]
["AT2G25010","blue","Encodes a nuclear localized aminotransferase like protein containing a plant mobile domain. MAIL1 is expressed in the root, SAM, leaves, flowers and embryo. Loss of function mutations display defects in root and shoot growth. In the root, primary root growth terminates early. In the shoot, leaf development is delayed, and lateral organs are smaller than normal. MAIL1 appears to affect meristem cell division and cell fate. Biochemical analysis of the mutants also demonstrates silencing defects. Based on epistasis analysis, this MAIN1 acts in a different pathway than DNA methylation, and siRNA and in the same pathway as MAIL1 and PP7L.","MAIN-LIKE 1 (MAIL1)","MAIN-LIKE 1 (MAIL1)"]
["AT1G48120","blue","Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain.","MAIN-LIKE 3 (MAIL3)","MAIN-LIKE 3 (MAIL3)"]
["AT5G45840","blue","Encodes a leucine-rich-repeat RLK that is localized to the plasma membrane of pollen tubes and functions with MIK1/2 as the male receptor of the pollen tube chemo-attractant LURE1.MDIS1 forms a complex with MIK1/2 and binds LURE1.","MALE DISCOVERER1 (MDIS1)","MALE DISCOVERER1 (MDIS1)"]
["AT3G01435","blue","Expressed protein;(source:Araport11)","MEDIATOR 11 (MED11)","MEDIATOR 11 (MED11)"]
["AT3G09180","blue","Mediator complex subunit.","MEDIATOR 3 (MED3)","MEDIATOR 3 (MED3)"]
["AT3G52860","blue","Encodes a mediator subunit,, important for development and senescence.","MEDIATOR28 (MED28)","MEDIATOR28 (MED28)"]
["AT1G22050","blue","membrane-anchored ubiquitin-fold protein 6 precursor;(source:Araport11)","MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 6 PRECURSOR (MUB6)","MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 6 PRECURSOR (MUB6)"]
["AT2G24940","blue","membrane-associated progesterone binding protein 2;(source:Araport11)","MEMBRANE-ASSOCIATED PROGESTERONE BINDING PROTEIN 2 (MAPR2)","MEMBRANE-ASSOCIATED PROGESTERONE BINDING PROTEIN 2 (AtMAPR2);MEMBRANE-ASSOCIATED PROGESTERONE BINDING PROTEIN 2 (MAPR2)"]
["AT1G15340","blue","Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.","METHYL-CPG-BINDING DOMAIN 10 (MBD10)","METHYL-CPG-BINDING DOMAIN 10 (MBD10)"]
["AT3G07930","blue","Encodes a DNA glycosylase that improves tolerance to genotoxic stress. The splice form MBD4L.3 is preferentially localized in the nucleoplasm.","METHYL-CPG-BINDING DOMAIN PROTEIN 4 LIKE (MBD4L)","METHYL-CPG-BINDING DOMAIN PROTEIN 4 LIKE (MBD4L)"]
["AT4G03260","blue","MASP1 overexpression promotes growth during drought and promotes microtubule stability and recovery after stress as well as microtubule bundling.MASP1 growth promotion and microtubule stabilization activities are dependent upon serine 670 phosphorylation. MASP1 binds microtubules;this activity is not affected by MASP1 phosphorylation status.MASP1 protein levels are induced by drought post-transcriptionally.","MICROTUBULE ASSOCIATED STRESS PROTEIN 1 (MASP1)","MICROTUBULE ASSOCIATED STRESS PROTEIN 1 (MASP1)"]
["AT4G35920","blue","Encodes an integral plasma membrane protein. Functionally complements the yeast mid1 mutant, a deficiency of Ca2+ influx. Involved in Ca2+ influx and mechanical sensing in roots. An over-expression line showed increased Ca2+ uptake than the wild type plant. The primary root of a knock-out mutant failed to penetrate a harder agar medium from a softer medium.","MID1-COMPLEMENTING ACTIVITY 1 (MCA1)","MID1-COMPLEMENTING ACTIVITY 1 (MCA1)"]
["AT5G55200","blue","Co-chaperone GrpE family protein;(source:Araport11)","MITOCHONDRIAL GRPE 1 (MGE1)","MITOCHONDRIAL GRPE 1 (MGE1)"]
["AT3G16270","blue","Involved in the plant trans-Golgi network (TGN), where it is part of an adaptor protein (AP) complex to promote vesicle generation with different cargo specificity and destination. Interacts with AP-4, whose function is required for MTV1 recruitment.","MODIFIED TRANSPORT TO THE VACUOLE1 (MTV1)","MODIFIED TRANSPORT TO THE VACUOLE1 (MTV1)"]
["AT4G03410","blue","Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein;(source:Araport11)","MPV17_PMP22 PROTEIN 1 (MPD1)","MPV17_PMP22 PROTEIN 1 (MPD1)"]
["AT5G10490","blue","A member of MscS-like gene family, structurally very similar to MSL3, comprising of an N-terminal chloroplast transit peptide, five trans-membrane helices and a C-terminal cytoplasmic domain. Mutant plants showed abnormalities in the size and shape of plastids. MSL2-GFP was localized to discrete foci on the plastid envelope and co-localize with the plastid division protein AtMinE.","MSCS-LIKE 2 (MSL2)","MSCS-LIKE 2 (MSL2)"]
["AT5G44780","blue","Member of MORF family consisting of of nine full-length proteins encoded in the nuclear genome. MORF proteins are required for all RNA editing events in plastids and for many, possibly also all, sites in mitochondria. Potential link between the RNA binding PPR protein and the protein contributing the enzymatic activity in RNA editing.","MULTIPLE ORGANELLAR RNA EDITING FACTOR 4 (MORF4)","MULTIPLE ORGANELLAR RNA EDITING FACTOR 4 (MORF4)"]
["AT5G48965","blue","Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8).","MUSTANG 6 (MUG6)","MUSTANG 6 (MUG6)"]
["AT1G17580","blue","Encodes a member of the type XI myosin protein family involved in organelle trafficking and overall plant development.","MYOSIN 1 (MYA1)","MYOSIN 1 (MYA1);ARABIDOPSIS MYOSIN 1 (ATMYA1);MYOSIN XI 1 (XI-1)"]
["AT1G14660","blue","member of putative Na+/H+ antiporter (AtNHX) family. Functions as a plasma membrane Li+/H+ antiporter. Involved in Li+ efflux and detoxification.","NA+/H+ EXCHANGER 8 (NHX8)","NA+/H+ EXCHANGER 8 (ATNHX8);SODIUM HYDROGEN EXCHANGER 8 (NHX8);NA+/H+ EXCHANGER 8 (NHX8)"]
["AT3G49530","blue","Transcription factor that serves as a molecular link between cold signals and pathogen resistance responses. Undergoes proteolytic processing triggered by cold-induced changes in membrane fluidity.It relocates from the plasma membrane to the nucleus in response to ER stress. NAC062 is phosphorylated by SnRK2.8 at Thr-142.","NAC DOMAIN CONTAINING PROTEIN 62 (NAC062)","NAC DOMAIN CONTAINING PROTEIN 62 (ANAC062);NTM1 (NAC WITH TRANSMEMBRANE MOTIF 1)-LIKE 6 (NTL6);NAC DOMAIN CONTAINING PROTEIN 62 (NAC062)"]
["AT4G35580","blue","Encodes a calmodulin-binding NAC protein (CBNAC). Contains calmodulin-binding domain in the C-terminus of the protein. Functions as a calmodulin-regulated transcriptional repressor.","NAC TRANSCRIPTION FACTOR-LIKE 9 (NTL9)","NAC TRANSCRIPTION FACTOR-LIKE 9 (NTL9);CALMODULIN-BINDING NAC PROTEIN (CBNAC)"]
["AT2G05320","blue","beta-1,2-N-acetylglucosaminyltransferase II;(source:Araport11)","N-ACETYLGLUCOSAMINYLTRANSFERASE II (GNT-II)","N-ACETYLGLUCOSAMINYLTRANSFERASE II (GNT-II);N-ACETYLGLUCOSAMINYLTRANSFERASE II (GNT2)"]
["AT4G35160","blue","Encodes a cytosolic N-acetylserotonin O-methyltransferase that can convert N-acetylserotonin to melatonin and serotonin to 5-methoxytryptamine in the process of melatonin synthesis. It does not have caffeic acid O- methyltransferase activity.","N-ACETYLSEROTONIN O-METHYLTRANSFERASE (ASMT)","N-ACETYLSEROTONIN O-METHYLTRANSFERASE (ASMT); (ASMT1)"]
["AT1G76350","blue","(NODULE INCEPTION)-LIKE PROTEIN, together with NLP4 controls a rhizobia-induced decrease in cell elongation rates, while additional cell divisions occurred independently of NLP4.","NIN-LIKE PROTEIN 5 (NLP5)","NIN-LIKE PROTEIN 5 (NLP5)"]
["AT2G43500","blue","Plant regulator RWP-RK family protein;(source:Araport11)","NIN-LIKE PROTEIN 8 (NLP8)","NIN-LIKE PROTEIN 8 (NLP8)"]
["AT5G45410","blue","Plastid localized protein of unknown function. Mutants are more susceptible to P. syringae and produce less callose upon infection.","NON HOST RESISTANCE 2A (ATNHR2A)","NON HOST RESISTANCE 2A (ATNHR2A)"]
["AT1G29150","blue","specifically interacts with FUS6/COP11 via the C-terminal domain of FUS6/COP11 and associates with an ATPase subunit of the 19S proteasome regulatory complex, AtS6A. The mRNA is cell-to-cell mobile.","NON-ATPASE SUBUNIT 9 (ATS9)","NON-ATPASE SUBUNIT 9 (ATS9);REGULATORY PARTICLE NON-ATPASE 6 (RPN6)"]
["AT1G15780","blue","mediator of RNA polymerase II transcription subunit 15a-like protein;(source:Araport11)","NON-RECOGNITION-OF-BTH 4 (NRB4)","NON-RECOGNITION-OF-BTH 4 (NRB4); (ATMED15A);MEDIATOR 15_1 (MED15_1)"]
["AT4G13250","blue","Encodes a chlorophyll b reductase involved in the degradation of chlorophyll b and LHCII (light harvesting complex II).","NON-YELLOW COLORING 1 (NYC1)","NON-YELLOW COLORING 1 (NYC1)"]
["AT4G22920","blue","Similar to the tomato senescence-inducible chloroplast stay-green protein 1. It is upregulated during maximal senescence in the Arabidopsis life cycle, especially in senescent leaves. Acts antagonistically with SGR2 to balance chlorophyll catabolism in chloroplasts with the dismantling and remobilizing of other cellular components in senescing leaf cells.","NON-YELLOWING 1 (NYE1)","NON-YELLOWING 1 (ATNYE1);STAY-GREEN (SGR);NON-YELLOWING 1 (NYE1);STAY-GREEN 1 (SGR1)"]
["AT4G11910","blue","Acts antagonistically with SGR1 to balance chlorophyll catabolism in chloroplasts with the dismantling and remobilizing of other cellular components in senescing leaf cells.","NONYELLOWING 2 (NYE2)","NONYELLOWING 2 (NYE2);STAY-GREEN 2 (SGR2)"]
["AT1G47240","blue","Encodes a member of the NRAMP2 gene family of metal ion transporters that is required for root growth at low Mn conditions. NRAMP2 is mainly localized to TGN and has influx transport activity of Mn in yeast. Mutation of NRAMP2 impaired root growth, although there was greater Mn retention in the roots under Mn-deficient conditions.","NRAMP METAL ION TRANSPORTER 2 (NRAMP2)","NRAMP METAL ION TRANSPORTER 2 (NRAMP2); (ATNRAMP2)"]
["AT1G72120","blue","Major facilitator superfamily protein;(source:Araport11)","NRT1/ PTR FAMILY 5.14 (NPF5.14)","NRT1/ PTR FAMILY 5.14 (NPF5.14); (ATNPF5.14)"]
["AT3G54140","blue","Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. GFP-tagged PTR1 localizes to the plasma membrane and has 8 to 11 predicted transmembrane domains. PTR1 is expressed in a number of different vascular tissues throughout the plant based on promoter:GUS expression analysis. ptr1 mutants have a lower dry weight than wild type plants when both are grown with Pro-Ala or Ala-Ala dipeptides as their nitrogen source, suggesting that PTR1 plays a role in dipeptide uptake in the roots. Furthermore N content of ptr1 mutants is lower than that of wild type plants when grown with Pro-Ala or a mixture of dipeptides as nitrogen source","NRT1/ PTR FAMILY 8.1 (NPF8.1)","NRT1/ PTR FAMILY 8.1 (NPF8.1);PEPTIDE TRANSPORTER 1 (PTR1); (ATNPF8.1);ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 1 (ATPTR1)"]
["AT4G13350","blue","Encodes a GTPase that interacts with nuclear shuttle proteins (NSPs) from a number of different plant viruses. The gene is widely expressed and NIG transcript levels do not rise in response to viral infection. This cytoplasmic protein does not directly interact with a viral movement protein (MP), but, it does promote the movement of NSP from the nucleus to the cytoplasm. Overexpression of NIG in Arabidopsis plants renders them more sensitive to geminivirus infection.","NSP (NUCLEAR SHUTTLE PROTEIN)-INTERACTING GTPASE (NIG)","NSP (NUCLEAR SHUTTLE PROTEIN)-INTERACTING GTPASE (NIG)"]
["AT1G17070","blue","Encodes a homologue of spliceosome disassembly factor NTR1. Required for correct expression and splicing of DOG1, a regulator of seed dormancy. The mRNA is cell-to-cell mobile.","SPLICEOSOMAL TIMEKEEPER LOCUS1 (STIPL1)","NTR1 (NTR1);NTC-RELATED PROTEIN 1 (NTR1);SPLICEOSOMAL TIMEKEEPER LOCUS1 (STIPL1)"]
["AT1G17590","blue","Binds directly to CCAAT cis-elements in the promoters of multiple MIR156 genes and inhibits the juvenile-to adult transition by activating transcription of these MIR156s.","NUCLEAR FACTOR Y, SUBUNIT A8 (NF-YA8)","NUCLEAR FACTOR Y, SUBUNIT A8 (NF-YA8); (NFYA8)"]
["AT3G53340","blue","nuclear factor Y, subunit B10;(source:Araport11)","NUCLEAR FACTOR Y, SUBUNIT B10 (NF-YB10)","NUCLEAR FACTOR Y, SUBUNIT B10 (NF-YB10)"]
["AT5G08190","blue","nuclear factor Y, subunit B12;(source:Araport11)","NUCLEAR FACTOR Y, SUBUNIT B12 (NF-YB12)","NUCLEAR FACTOR Y, SUBUNIT B12 (NF-YB12)"]
["AT1G17370","blue","Encodes an RNA?binding protein involved in stress granule formation. Regulated by a transposable element small RNA.","OLIGOURIDYLATE BINDING PROTEIN 1B (UBP1B)","OLIGOURIDYLATE BINDING PROTEIN 1B (UBP1B)"]
["AT4G08180","blue","OSBP(oxysterol binding protein)-related protein 1C;(source:Araport11)","OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1C (ORP1C)","OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1C (ORP1C)"]
["AT1G80890","blue","GAG1At protein;(source:Araport11)","OUTER ENVELOPE PROTEIN 9.2 (OEP9.2)","OUTER ENVELOPE PROTEIN 9.2 (OEP9.2)"]
["AT1G69790","blue","Protein kinase superfamily protein;(source:Araport11)","PBS1-LIKE 18 (PBL18)","PBS1-LIKE 18 (PBL18)"]
["AT3G29090","blue","Encodes an atypical pectin methylesterase that does not require salt for its activity and has a blockwise mode of pectin demethylesterification.","PECTIN METHYLESTERASE 31 (PME31)","PECTIN METHYLESTERASE 31 (PME31);A. THALIANA PECTIN METHYLESTERASE 31 (ATPME31)"]
["AT2G47670","blue","PMEI6 pectin methylesterase inhibitor functions in establishing a patter of homogalacturonan methylesterification of seed coat cell wall proteins .","PECTIN METHYLESTERASE INHIBITOR 6 (PMEI6)","PECTIN METHYLESTERASE INHIBITOR 6 (PMEI6)"]
["AT3G21865","blue","Interacts with PEX4 in a yeast two-hybrid. The PEX4 and PEX22 pair may be important during the remodeling of peroxisome matrix contents as glyoxysomes transition to leaf peroxisomes.","PEROXIN 22 (PEX22)","PEROXIN 22 (PEX22)"]
["AT2G33770","blue","Encodes a ubiquitin-conjugating E2 enzyme. UBC24 mRNA accumulation is suppressed by miR399f, miR399b and miR399c. Involved in phosphate starvation response and mediates degradation of PHO1 and PHT1s at endomembrane. Its expression is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots. The mRNA is cell-to-cell mobile.","PHOSPHATE 2 (PHO2)","PHOSPHATE 2 (PHO2);UBIQUITIN-CONJUGATING ENZYME 24 (UBC24);UBIQUITIN-CONJUGATING ENZYME 24 (ATUBC24)"]
["AT3G56960","blue","Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology.","PHOSPHATIDYL INOSITOL MONOPHOSPHATE 5 KINASE 4 (PIP5K4)","PHOSPHATIDYL INOSITOL MONOPHOSPHATE 5 KINASE 4 (PIP5K4)"]
["AT1G32380","blue","Encodes a P-dependent phosphoribosyl pyrophosphate (PRPP) synthase.","PHOSPHORIBOSYL PYROPHOSPHATE (PRPP) SYNTHASE 2 (PRS2)","PHOSPHORIBOSYL PYROPHOSPHATE (PRPP) SYNTHASE 2 (PRS2)"]
["AT2G25760","blue","Casein kinase involved in phosphorylation and ubiquination of RYR/PYLs, resulting in negative regulation of ABA response. Plays a role in repressing the transition from vegetative to reproductive phase.","PHOTOREGULATORY PROTEIN KINASE 4 (PPK4)","PHOTOREGULATORY PROTEIN KINASE 4 (PPK4);MUT9P-LIKE-KINASE 3 (MLK3);ARABIDOPSIS EL1-LIKE 1 (AEL1)"]
["AT4G32070","blue","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","PHOX4 (Phox4)","PHOX4 (Phox4)"]
["AT4G18130","blue","member of Histidine Kinase","PHYTOCHROME E (PHYE)","PHYTOCHROME E (PHYE)"]
["AT1G22280","blue","Encodes a phytochrome-associated protein, PAPP2C (phytochrome-associated protein phosphatase type 2C). PAPP2C interacts in the nucleus with phyA (phytochrome A) and phyB. Functions as a regulator of phytochrome-interacting factor PIF3 by dephosphorylating phytochromes in the nucleus.","PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C (PAPP2C)","PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C (PAPP2C)"]
["AT5G61270","blue","Basic helix-loop-helix (bHLH) phytochrome interacting factor. Interacts specifically with the far-red light?absorbing Pfr form of phyB through a conserved domain called the active phyB binding motif. Upon light exposure, PIF7 rapidly migrates to intranuclear speckles, where it colocalizes with phyB. Role as negative regulator of phyB-mediated seedling deetiolation.","PHYTOCHROME-INTERACTING FACTOR7 (PIF7)","PHYTOCHROME-INTERACTING FACTOR7 (PIF7)"]
["AT1G06570","blue","Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants.","PHYTOENE DESATURATION 1 (PDS1)","PHYTOENE DESATURATION 1 (PDS1);4-HYDROXYPHENYLPYRUVATE DIOXYGENASE (HPPD);4-HYDROXYPHENYLPYRUVATE DIOXYGENASE (HPD)"]
["AT3G59640","blue","Plasma membrane localized. glycine rich protein of unknown function. Involved in non host resistance.","PHYTOPHTHORA SOJAE SUSCEPTIBLE 1 (PSS1)","PHYTOPHTHORA SOJAE SUSCEPTIBLE 1 (PSS1)"]
["AT1G13590","blue","Encodes a phytosulfokine-alpha (PSK) precursor, a unique plant peptide growth factor first described in Asparagus.","PHYTOSULFOKINE 1 PRECURSOR (PSK1)","PHYTOSULFOKINE 1 PRECURSOR (ATPSK1);PHYTOSULFOKINE 1 PRECURSOR (PSK1)"]
["AT2G39210","blue","Major facilitator superfamily transmembrane transporter responsible for the uptake of picolinate herbicides.","PICLORAM RESISTANT30 (PIC30)","PICLORAM RESISTANT30 (PIC30)"]
["AT1G15200","blue","protein-protein interaction regulator family protein;(source:Araport11)","PININ (PININ)","PININ (PININ)"]
["AT3G02800","blue","Encodes an atypical dual-speci&#64257;city protein tyrosine phosphatase which negatively regulates plant salt tolerance.","PLANT AND FUNGI ATYPICAL DUAL-SPECI&#64257;CITY PHOSPHATASE 3 (PFA-DSP3)","PLANT AND FUNGI ATYPICAL DUAL-SPECI&#64257;CITY PHOSPHATASE 3 (PFA-DSP3); (AtPFA-DSP3)"]
["AT5G18480","blue","Encodes an IPC (inositol phosphorylceramide) glucuronosyltransferase. Defects in transmission via the pollen are evident but the defect in transmission through the male gametophyte is not due to improper pollen development or inability of pollen tubes to germinate and grow. Using a pollen specific complementation strategy to obtain homozygotes, loss of function results in constitutive hypersensitive response and severe growth defects.","PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 6 (PGSIP6)","PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 6 (PGSIP6);MONOCATION-INDUCED [CA2+]I INCREASES 1 (MOCA1);INOSITOL PHOSPHORYLCERAMIDE GLUCURONOSYLTRANSFERASE 1 (IPUT1)"]
["AT1G76390","blue","Plant U-box type E3 ubiquitin ligase (PUB).","PLANT U-BOX 43 (PUB43)","PLANT U-BOX 43 (PUB43); (ATPUB43)"]
["AT1G27910","blue","Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.","PLANT U-BOX 45 (PUB45)","PLANT U-BOX 45 (PUB45);ARABIDOPSIS THALIANA PLANT U-BOX 45 (ATPUB45)"]
["AT3G27310","blue","encodes a protein that contains a UBX domain and regulates AtCDC48 by inhibiting its ATPase activity and by promoting the disassembly of the active hexamer. Phenotypic analysis of pux1 plants revealed that the loss of PUX1 accelerated the growth of various plant organs including roots and inflorescence shoots. AtCDC48 and SYP31 colocalize at the division plane during cytokinesis and to interact in vitro and in vivo.","PLANT UBX DOMAIN-CONTAINING PROTEIN 1 (PUX1)","PLANT UBX DOMAIN-CONTAINING PROTEIN 1 (PUX1)"]
["AT2G01650","blue","encodes a peripheral membrane protein that contains UBX domain and interacts with AtCDC48 in vitro and co-fractionates with membrane-associated but not soluble AtCDC48 in vivo.","PLANT UBX DOMAIN-CONTAINING PROTEIN 2 (PUX2)","PLANT UBX DOMAIN-CONTAINING PROTEIN 2 (PUX2)"]
["AT2G45140","blue","Encodes a Plant VAMP-Associated protein that localizes to the ER and binds to the sitosterol-binding protein ORP3a. The WFDE motif in ORP3a appears to be important for this direct interaction. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent. The mRNA is cell-to-cell mobile.","PLANT VAP HOMOLOG 12 (PVA12)","PLANT VAP HOMOLOG 12 (PVA12)"]
["AT2G02850","blue","Encodes plantacyanin one of blue copper proteins. Involved in anther development and pollination. Expressed in the transmitting tract of the pistil.","PLANTACYANIN (ARPN)","PLANTACYANIN (ARPN)"]
["AT1G69295","blue","Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.","PLASMODESMATA CALLOSE-BINDING PROTEIN 4 (PDCB4)","PLASMODESMATA CALLOSE-BINDING PROTEIN 4 (PDCB4)"]
["AT2G16070","blue","An integral outer envelope membrane protein (its homolog in A thaliana PDV1), component of the plastid division machinery. Similar to ARC6, PDV2 localizes to a continuous ring at the division site in wild-type plants. PDV1 and PDV2 are required for localization of ARC5 at the chloroplast division site.","PLASTID DIVISION2 (PDV2)","PLASTID DIVISION2 (PDV2)"]
["AT5G13700","blue","Encodes a protein with polyamine oxidase activity. The mRNA of this gene is only expressed in very low amounts in the organs where it was detected (light-grown plants).","POLYAMINE OXIDASE 1 (PAO1)","POLYAMINE OXIDASE 1 (PAO1); (APAO);POLYAMINE OXIDASE 1 (ATPAO1)"]
["AT1G09815","blue","polymerase delta 4;(source:Araport11)","POLYMERASE DELTA 4 (POLD4)","POLYMERASE DELTA 4 (POLD4)"]
["AT3G01200","blue","Encodes a PPDK regulatory protein that has protein kinase activity but lacks protein phosphatase activity towards PPDK (pyruvate orthophosphate dikinase).","PPDK REGULATORY PROTEIN 2 (RP2)","PPDK REGULATORY PROTEIN 2 (AtRP2);PPDK REGULATORY PROTEIN 2 (RP2)"]
["AT1G13350","blue","Paralog of PRP4KA. PRP4K-family member protein.","PRE-MRNA PROCESSING FACTOR 4 KINASE B (PRP4KB)","PRE-MRNA PROCESSING FACTOR 4 KINASE B (PRP4KB)"]
["AT1G68690","blue","Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807).","PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 9 (PERK9)","PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 9 (PERK9);PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 9 (AtPERK9)"]
["AT4G17420","blue","PAWH1 along with PAWH2 is part of endoplasmic reticulum ubiquitin ligase complex with Arabidopsis HRD1 via interaction with EBS7. As such it plays a role in promoting protein degradation via the ERAD pathway.","PROTEIN ASSOCIATED WITH HRD1-1 (PAWH1)","PROTEIN ASSOCIATED WITH HRD1-1 (PAWH1); (ATAIM24-B1)"]
["AT2G02800","blue","Encodes protein kinase APK2b.","PROTEIN KINASE 2B (APK2B)","PROTEIN KINASE 2B (APK2B);KINASE 2 (KIN2);PBS1-LIKE 3 (PBL3)"]
["AT5G52420","blue","transmembrane protein;(source:Araport11)","PSI-INTERACTING ROOT-CELL ENRICHED 3 (PRCE3)","PSI-INTERACTING ROOT-CELL ENRICHED 3 (PRCE3)"]
["AT5G08660","blue","D-lactate dehydrogenase (DUF668);(source:Araport11)","PSK SIMULATOR 3 (PSI3)","PSK SIMULATOR 3 (PSI3)"]
["AT3G19420","blue","Encodes a phosphatase with low in vitro tyrosine phosphatase activity that is capable of dephosphorylating in vitro the 3'phosphate group of PI3P, PI(3,4)P2, and PI(3,5)P2 and may be an effector of lipid signaling. The mRNA is cell-to-cell mobile.","PTEN 2 (PEN2)","PTEN 2 (PEN2);PHOSPHATASE AND TENSIN HOMOLOG DELETED ON CHROMOSOME TEN 2A (PTEN2A);MODIFIED TRANSPORT TO THE VACUOLE 3 (MTV3);PTEN 2 (ATPEN2)"]
["AT1G19770","blue","Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. The mRNA is cell-to-cell mobile.","PURINE PERMEASE 14 (PUP14)","PURINE PERMEASE 14 (ATPUP14);PURINE PERMEASE 14 (PUP14)"]
["AT5G23300","blue","dihydroorotate dehydrogenase, catalyses fourth step of pyrimidine biosynthesis","PYRIMIDINE D (PYRD)","PYRIMIDINE D (PYRD)"]
["AT5G54960","blue","pyruvate decarboxylase-2","PYRUVATE DECARBOXYLASE-2 (PDC2)","PYRUVATE DECARBOXYLASE-2 (PDC2)"]
["AT5G15400","blue","Single copy gene encoding a putative ubiquitin conjugating E4 factor. Contains Ub elongating factor core domain and C-terminal U-box. Involved in ubiquitination of NLRs.","MUTANT, SNC1 -ENHANCING 3 (MUSE3)","R UBIQUITIN FUSION DEGRADATION PROTEIN2 (UFD2);MUTANT, SNC1 -ENHANCING 3 (MUSE3)"]
["AT1G43890","blue","Ras-related small GTPase; affects stomatal development by regulating lipid droplet dynamics. Physically interacts with SEIPIN2/3, two orthologues of mammalian seipin, which function in the formation of lipid droplets.","RAB GTPASE HOMOLOG B18 (RAB18)","RAB GTPASE HOMOLOG 18-1 (RAB18-1);ARABIDOPSIS RAB GTPASE HOMOLOG B18 (ATRAB18);ARABIDOPSIS RAB GTPASE HOMOLOG C1 (ATRABC1);RAB GTPASE HOMOLOG C1 (RABC1);ARABIDOPSIS RAB GTPASE HOMOLOG C1 (ATRAB-C1);RAB GTPASE HOMOLOG B18 (RAB18);LIPID DROPLETS AND STOMATA 1 (LDS1)"]
["AT1G71310","blue","A protein coding gene with unknown function. The 5? UTR and the first two exons and introns of this gene overlap with a RNA coding gene TER1. TER1 (GenBank accession no. HQ401284) encodes a putative template sequence (5&#8242;-CTAAACCCTA-3&#8242;) corresponding to 1.5 copies of the Arabidopsis telomere repeat (PNAS 2011, 108:73-78).","RADIATION SENSITIVE 52-1 (RAD52-1)","RADIATION SENSITIVE 52-1 (RAD52-1); (RAD52-1B.1);ORGANELLAR DNA-BINDING PROTEIN 1 (ODB1)"]
["AT5G38470","blue","Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.","RADIATION SENSITIVE23D (RAD23D)","RADIATION SENSITIVE23D (RAD23D)"]
["AT1G35470","blue","Encodes a homologue of human RanBPM that belongs to the uncharacterized family of plant SPRY, LisH, CTLH and CRA domain-containing proteins.","RAN-BINDING PROTEIN IN THE MICROTUBULE-ORGANIZING CENTRE (RANBPM)","RAN-BINDING PROTEIN IN THE MICROTUBULE-ORGANIZING CENTRE (RANBPM)"]
["AT3G26000","blue","RIPF1 is an F-Box E3 ligase that interacts with the ABA receptor RCAR3 and appears to be responsible for facilitating its turnover.","RCAR3 INTERACTING F-BOX PROTEIN 1 (RIFP1)","RCAR3 INTERACTING F-BOX PROTEIN 1 (RIFP1)"]
["AT1G54130","blue","This gene appears to be at least partially redundant with RSH2 (At3g14050). Guanosine tetraphosphate synthesized by RSH2/RSH3 (and CRSH At3g17470) to an unknown extent can repress chloroplast gene expression, and also reduce chloroplast size. Involved in the maintenance of the (p)ppGp level to accustom plastidial gene expression to darkness.","RELA/SPOT HOMOLOG 3 (RSH3)","RELA/SPOT HOMOLOG 3 (RSH3); (AT-RSH3);RELA/SPOT HOMOLOG 3 (ATRSH3)"]
["AT5G13330","blue","encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.","RELATED TO AP2 6L (Rap2.6L)","RELATED TO AP2 6L (Rap2.6L)"]
["AT3G57710","blue","Protein kinase superfamily protein;(source:Araport11)","RESISTANCE RELATED KINASE 1 (RKS1)","RESISTANCE RELATED KINASE 1 (RKS1); (ZRK1)"]
["AT2G23640","blue","Encodes RTNLB13, a reticulon protein integral to the endoplasmic reticulum (ER) membrane that have the ability to shape the ER into tubules.","RETICULAN LIKE PROTEIN B13 (RTNLB13)","RETICULAN LIKE PROTEIN B13 (RTNLB13)"]
["AT1G79810","blue","Dominant suppressor of det1 phenotypes. Encodes a peroxisomal protein essential for Arabidopsis growth. Inserted directly from the cytosol into peroxisomes.","REVERSAL OF THE DET PHENOTYPE 3 (TED3)","REVERSAL OF THE DET PHENOTYPE 3 (TED3);PEROXIN 2 (PEX2);ARABIDOPSIS PEROXIN 2 (ATPEX2)"]
["AT1G63120","blue","AtRBL2 has been identified as a rhomboid protein involved in regulated intramembrane proteolysis (RIP). The enzyme has the proteolytic activity and substrate specificity comparable to the Drosophila Rho-1 protein.","RHOMBOID-LIKE 2 (RBL2)","RHOMBOID-LIKE 2 (ATRBL2);RHOMBOID-LIKE 2 (RBL2)"]
["AT3G17611","blue","RHOMBOID-like protein 14;(source:Araport11)","RHOMBOID-LIKE PROTEIN 14 (RBL14)","RHOMBOID-LIKE PROTEIN 10 (ATRBL10);RHOMBOID-LIKE PROTEIN 14 (ATRBL14);RHOMBOID-LIKE PROTEIN 10 (RBL10);RHOMBOID-LIKE PROTEIN 14 (RBL14)"]
["AT3G01740","blue","Mitochondrial ribosomal protein L37;(source:Araport11)","RIBOSOMAL PROTEIN ML54 (ML54)","RIBOSOMAL PROTEIN ML54 (ML54)"]
["AT1G79380","blue","Encodes a ubiquitin ligase that is an essential upstream modulator of JA signaling in response to various stimuli.","RING DOMAIN LIGASE 4 (RGLG4)","RING DOMAIN LIGASE 4 (RGLG4)"]
["AT3G01650","blue","Encodes RGLG1 (RING domain ligase 1), a RING domain ubiquitin E3 ligase that negatively regulates the drought stress response by mediating ERF53 transcriptional activity. ABA inhibits myristoylation and induces shuttling of the RGLG1 to promote nuclear degradation of PP2CA.","RING DOMAIN LIGASE1 (RGLG1)","RING DOMAIN LIGASE1 (RGLG1)"]
["AT2G01735","blue","encodes a RING-H2 zinc finger protein essential for seed development.","RING-FINGER PROTEIN FOR EMBRYOGENESIS (RIE1)","RING-FINGER PROTEIN FOR EMBRYOGENESIS (RIE1)"]
["AT4G00660","blue","Immunoprecipitation with mRNA decapping complex members DCP1 and DCP2.","RNAHELICASE-LIKE 8 (RH8)","RNAHELICASE-LIKE 8 (RH8); (ATRH8)"]
["AT1G48380","blue","Encodes a novel nuclear protein required for root hair initiation and ploidy-dependent cell growth. Its sequence has similarity to the C-terminal domain of mammalian DNA topo IIalpha. Shows in vitro DNA binding activity and is likely to be part of the topo VI complex by binding to subunit A.","ROOT HAIRLESS 1 (RHL1)","ROOT HAIRLESS 1 (RHL1);HYPOCOTYL 7 (HYP7)"]
["AT4G25230","blue","RPM1 interacting protein 2, has a CUE domain which is sufficient for the interaction with RPM1.Positive regulator of RPM1 and PRS2 mediated hypersensitive response.Functions as ubiquitin ligase and binds to RPM1.","RPM1 INTERACTING PROTEIN 2 (RIN2)","RPM1 INTERACTING PROTEIN 2 (RIN2)"]
["AT5G08450","blue","Component of histone-deacetylase complexes. Interacts with HDA6 and HDA19 and facilitates histone deacetylation. Several salt-inducible genes are de-repressed in hdc1 mutants. Mutants are hypersensitive to ABA during germination, grow less and flower later than wildtype. HDC1-overexpressing plants display opposite phenotypes.","HISTONE DEACETYLATION COMPLEX 1 (HDC1)","RXT3-LIKE (RXT3-LIKE);HISTONE DEACETYLATION COMPLEX 1 (HDC1)"]
["AT1G75950","blue","SKP1 is core component of the SCF family of E3 ubiquitin ligases and serves to tether the rest of the complex to an F-box protein, which provides specificity in binding to ubiquitin ligase substrate proteins. Predominately expressed from leptotene to pachytene. Negatively regulates recombination. Interacts with P0, a silencing suppressor protein encoded by poleroviruses by means of a conserved minimal F-box motif. The mRNA is cell-to-cell mobile.","S PHASE KINASE-ASSOCIATED PROTEIN 1 (SKP1)","S PHASE KINASE-ASSOCIATED PROTEIN 1 (SKP1);ARABIDOPSIS SKP1 HOMOLOGUE 1 (ASK1);UFO INTERACTING PROTEIN 1 (UIP1); (SKP1A); (ATSKP1)"]
["AT2G19390","blue","SAGA complex subunit. Regulates gene expression by affecting histone H3 acetylation.","SAGA COMPLEX SUBUNIT 2A (SCS2A)","SAGA COMPLEX SUBUNIT 2A (SCS2A)"]
["AT2G31870","blue","The gene encodes a poly(ADPribose) glycohydrolase (PARG1). Mutant analysis suggests that PARG1 plays a role in abiotic stress responses and DNA repair. Loss of function mutants accumulate poly(ADPribose) and have increased cell death when treated with bleomycin.","SANSKRIT FOR 'BRIGHT' (TEJ)","SANSKRIT FOR 'BRIGHT' (TEJ);POLY(ADP-RIBOSE) GLYCOHYDROLASE 1 (PARG1); (ATPARG1)"]
["AT5G52510","blue","Transcription factor; member of the GRAS family of regulatory proteins; target of GL1/3; involved in trichome formation.","SCARECROW-LIKE 8 (SCL8)","SCARECROW-LIKE 8 (SCL8)"]
["AT1G10310","blue","encodes a NADPH-dependent pterin aldehyde reductase that accepts pterin aldehyde as well as dihydropterin aldehyde as substrates involved in metabolism and salvage of folate and its derivatives.Subunit of the PAGA complex.","SDR LIKE (SDRL)","SDR LIKE (SDRL)"]
["AT1G61250","blue","Encodes a putative secretory carrier membrane protein (SC3). The mRNA is cell-to-cell mobile.","SECRETORY CARRIER 3 (SC3)","SECRETORY CARRIER MEMBRANE PROTEIN 1 (SCAMP1); (ATSCAMP1);SECRETORY CARRIER 3 (SC3)"]
["AT5G16460","blue","Membrane protein involved in lipid droplet biogenesis primarily in embryos.","SEIPIN1 (SEIPIN1)","SEIPIN1 (SEIPIN1)"]
["AT2G34380","blue","Membrane protein involved in lipid droplet biogenesis primarily in pollen. The interaction between VAP27-1 and SEIPIN3 requires the N-terminal 25 amino acids of SEIPIN3 that contain an FFAT motif.","SEIPIN3 (SEIPIN3)","SEIPIN3 (SEIPIN3)"]
["AT3G52020","blue","serine carboxypeptidase-like 39;(source:Araport11)","SERINE CARBOXYPEPTIDASE-LIKE 39 (scpl39)","SERINE CARBOXYPEPTIDASE-LIKE 39 (scpl39)"]
["AT1G09140","blue","Encodes a serine-arginine rich RNA binding protein involved in regulation of splicing (including splicing of itself). Exists as 3 alternative spliced forms that are differentially expressed. AT1G09140.1 predominantly accumulates in the cytosol in light grown plants.Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926.","SERINE/ARGININE-RICH PROTEIN SPLICING FACTOR 30 (SR30)","SERINE-ARGININE PROTEIN 30 (ATSRP30);SERINE/ARGININE-RICH PROTEIN SPLICING FACTOR 30 (At-SR30);SERINE/ARGININE-RICH PROTEIN SPLICING FACTOR 30 (SR30)"]
["AT1G17040","blue","Encodes a protein that contains an SH2 domain. It can pull down a 120-kD tyrosine-phosphorylated protein in vitro. It is predicted to act as a transcription factor.","SH2 DOMAIN PROTEIN A (SHA)","SH2 DOMAIN PROTEIN A (SHA)"]
["AT2G21940","blue","Encodes a shikimate kinase. Its transcripts appear to be expressed most highly in mature embryos and senescing leaves, and its transcript levels rise during heat stress and recovery. It is believed to be localized to the chloroplast.","SHIKIMATE KINASE 1 (SK1)","SHIKIMATE KINASE 1 (SK1); (ATSK1)"]
["AT1G31480","blue","encodes a novel protein that may be part of a gene family represented by bovine phosphatidic acid-preferring phospholipase A1 (PA-PLA1)containing a putative transmembrane domain. SGR2 is involved in the formation and function of the vacuole.","SHOOT GRAVITROPISM 2 (SGR2)","SHOOT GRAVITROPISM 2 (SGR2)"]
["AT2G36810","blue","Specifically involved in gravity perception and/or gravity signal transduction for the shoot gravitropic response. Effects gravitropism only in inflorescence stems but normal in both hypocotyls and roots.","SHOOT GRAVITROPISM 6 (SGR6)","SHOOT GRAVITROPISM 6 (SGR6)"]
["AT5G02750","blue","Encodes an E3 ligase, SHOOT GRAVITROPISM9. Modulates the interaction between statoliths and F-Actin in gravity sensing.","SHOOT GRAVITROPISM 9 (SGR9)","SHOOT GRAVITROPISM 9 (SGR9)"]
["AT5G11470","blue","SG1 is a Bromo-Adjacent Homology (BAH) domain containing protein involved in CHG methylation within genebodies. Loss of function results in pleiotrophic developmental effects that increase after 4 generations.","INCREASE IN BONSAI METHYLATION 2 (IBM2)","SHOOT GROWTH 1 (SG1);ANTI-SILENCING 1 (ASI1);INCREASE IN BONSAI METHYLATION 2 (IBM2)"]
["AT4G39100","blue","Encodes a plant-specific histone reader capable of recognizing both H3K27me3 and H3K4me3 via its bromo-adjacent homology (BAH) and plant homeodomain (PHD) domains, respectively. Detailed biochemical and structural studies suggest a binding mechanism that is mutually exclusive for either H3K4me3 or H3K27me3. SHL plays a role in the repression of flowering.","SHORT LIFE (SHL)","SHORT LIFE (SHL)"]
["AT3G06125","blue","Unknown gene The mRNA is cell-to-cell mobile.","SHORT OPEN READING FRAME 22 (SORF22)","SHORT OPEN READING FRAME 22 (SORF22)"]
["AT1G23550","blue","Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Its transcript level is up-regulated by tunicamycin (N-linked glycosylation inhibitor causing ER stress).","SIMILAR TO RCD ONE 2 (SRO2)","SIMILAR TO RCD ONE 2 (SRO2)"]
["AT1G50170","blue","encodes sirohydrochlorin ferrochelatase catalyzing the last step of the siroheme biosynthesis","SIROHYDROCHLORIN FERROCHELATASE B (SIRB)","SIROHYDROCHLORIN FERROCHELATASE B (ATSIRB);SIROHYDROCHLORIN FERROCHELATASE B (SIRB)"]
["AT2G47310","blue","Functions in an antagonistic manner to its close homolog FCA. The SSF414N protein variant interacts more strongly with CUL1, a component of the E3 ubiquitination complex, than the SSF414D form, mediating differences in SSF protein degradation and FLC expression.","SISTER OF FCA (SSF)","SISTER OF FCA (SSF)"]
["AT2G17030","blue","Encodes a SKP1/ASK-interacting protein.","SKP1/ASK-INTERACTING PROTEIN 23 (SKIP23)","SKP1/ASK-INTERACTING PROTEIN 23 (SKIP23);F-BOX/DUF295 ANCESTRAL 11 (ATFDA11); (ATSKIP23)"]
["AT3G54480","blue","Encodes an SKP1 interacting partner (SKIP5).","SKP1/ASK-INTERACTING PROTEIN 5 (SKIP5)","SKP1/ASK-INTERACTING PROTEIN 5 (SKIP5); (SKP5)"]
["AT2G43810","blue","Small nuclear ribonucleoprotein family protein;(source:Araport11)","SM-LIKE 6B (LSM6B)","SM-LIKE 6B (LSM6B)"]
["AT1G53090","blue","Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA4 (and SPA3) predominantly regulates elongation growth in adult plants.","SPA1-RELATED 4 (SPA4)","SPA1-RELATED 4 (SPA4)"]
["AT4G21534","blue","Diacylglycerol kinase family protein;(source:Araport11)","SPHINGOSINE KINASE 2 (SPHK2)","SPHINGOSINE KINASE 2 (SPHK2)"]
["AT2G27580","blue","Regulated by heat shock.","STRESS ASSOCIATED PROTEIN3 (SAP3)","STRESS ASSOCIATED PROTEIN3 (SAP3)"]
["AT1G68830","blue","STN7 protein kinase; required for state transitions, phosphorylation of the major antenna complex (LHCII) between PSII and PSI, and light adaptation. STN7 is involved in state transitions.","STT7 HOMOLOG STN7 (STN7)","STT7 HOMOLOG STN7 (STN7)"]
["AT4G36260","blue","A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis. Encodes protein with a single zinc finger motif and a members of a small gene family of putative transcription factors in which the SHORT INTERNODES (SHI) gene is found. STY2/STY1 double mutants showed defective style, stigma as well as serrated leaves.","STYLISH 2 (STY2)","STYLISH 2 (STY2);SHI RELATED SEQUENCE 2 (SRS2)"]
["AT4G02280","blue","Encodes a protein with sucrose synthase activity (SUS3). It appears to be important for sucrose metabolism in developing seeds, especially during the late maturation phase, about 18 days after flowering.","SUCROSE SYNTHASE 3 (SUS3)","SUCROSE SYNTHASE 3 (SUS3); (ATSUS3)"]
["AT2G02860","blue","encodes a sucrose transporter in sieve elements and a number of sink tissues and cell types. Gene expression is induced by wounding.","SUCROSE TRANSPORTER 2 (SUT2)","SUCROSE TRANSPORTER 2 (SUT2);ARABIDOPSIS THALIANA SUCROSE TRANSPORTER 3 (ATSUC3);SUCROSE TRANSPORTER 3 (SUC3); (ATSUT2)"]
["AT1G31170","blue","encodes a cysteine-sulfinic acid reductase (sulfiredoxin - EC 1.8.98.2) capable of reducing overoxidized plastidic 2-Cys-Prx involved in peroxide detoxification and response to oxidative stress","SULFIREDOXIN (SRX)","SULFIREDOXIN (SRX)"]
["AT3G55880","blue","PIN1-interacting membrane protein; regulates acropetal auxin transport in response to sulfur deficiency. A gain-of-function mutant of SUE4 exhibited improved low sulphur tolerance.","SULPHATE UTILIZATION EFFICIENCY 4 (SUE4)","SULPHATE UTILIZATION EFFICIENCY 4 (SUE4)"]
["AT2G21470","blue","Encodes one of the two subunits of the SUMO activation enzyme required during sumolation. Sumolation is a post-translational protein modification process similar to ubiquitination during which a polypeptide (SUMO) is covalently attached to a target protein.","SUMO-ACTIVATING ENZYME 2 (SAE2)","SUMO-ACTIVATING ENZYME 2 (SAE2);SUMO-ACTIVATING ENZYME 2 (ATSAE2);EMBRYO DEFECTIVE 2764 (EMB2764)"]
["AT5G04460","blue","RING/U-box superfamily protein. SUMO- targeted ubiquitin ligase.","SUMO-TARGETED UBIQUITIN E3 LIGASE 5 (STUBL5)","SUMO-TARGETED UBIQUITIN E3 LIGASE 5 (STUBL5)"]
["AT3G10490","blue","Encodes a NAC transcription factor that physically associates with the histone H3K4 demethylase JMJ14 and through that association is involved in transcriptional repression and flowering time control.","NAC DOMAIN CONTAINING PROTEIN 52 (ANAC052)","SUPPRESSOR OF GENE SILENCING 1 (SGS1);NAC DOMAIN CONTAINING PROTEIN 52 (ANAC052);NAC DOMAIN CONTAINING PROTEIN 52 (NAC052)"]
["AT2G46340","blue","Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA1 is a PHYA signaling intermediate, putative regulator of PHYA signaling pathway. Light responsive repressor of photomorphogenesis. Involved in regulating circadian rhythms and flowering time in plants. Under constant light, the abundance of SPA1 protein exhibited circadian regulation, whereas under constant darkness, SPA1 protein levels remained unchanged. In addition, the spa1-3 mutation slightly shortened circadian period of CCA1, TOC1/PRR1 and SPA1 transcript accumulation under constant light.","SUPPRESSOR OF PHYA-105 1 (SPA1)","SUPPRESSOR OF PHYA-105 1 (SPA1)"]
["AT4G31200","blue","RNA-binding splicing factor; part of SWAP1-SFPS-RRC1 splicing factor complex modulates pre-mRNA splicing to promote photomorphogenesis.","SUPPRESSOROF-WHITE-APRICOT/SURP RNA-BINDING DOMAINCONTAINING PROTEIN1 (SWAP1)","SUPPRESSOROF-WHITE-APRICOT/SURP RNA-BINDING DOMAINCONTAINING PROTEIN1 (SWAP1)"]
["AT4G37120","blue","Encodes a zinc finger containing protein similar to step II splicing factors that is similar to SMP1. SMP2 is also reduced in SMP1 epigenetic alleles; plants make smaller organs having reduced cell numbers but increased cell size. The mRNA is cell-to-cell mobile.","SWELLMAP 2 (SMP2)","SWELLMAP 2 (SMP2)"]
["AT1G21700","blue","Member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A, the other two members of the SWI3 family. Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Identified as a specific subunit of BRM-associated SWI/SNF (BAS) complexes (PMID:36471048). Also referred to as CHB3 in Zhou et al (2003).","SWITCH/SUCROSE NONFERMENTING 3C (SWI3C)","SWITCH/SUCROSE NONFERMENTING 3C (SWI3C); (CHB4);SWITCH/SUCROSE NONFERMENTING 3C (ATSWI3C)"]
["AT3G01890","blue","Encodes SWP73A, a subunit of the SWI/SNF chromatin remodeling complex. A specific subunit of BRM-associated SWI/SNF (BAS) complexes (PMID:36471048).While undergoing normal vegetative development, swp73a mutants display reduced expression of FLOWERING LOCUS C and early flowering in short days.","SWP73A (SWP73A)","SWP73A (SWP73A)"]
["AT5G16830","blue","member of SYP2 Gene Family. Over-expression of the gene in tobacco protoplasts leads to a disruption of vacuolar transport from the prevacuolar compartment (PVC) to the vacuole, but not from the Golgi apparatus to the plasma membrane.","SYNTAXIN OF PLANTS 21 (SYP21)","SYNTAXIN OF PLANTS 21 (SYP21); (PEP12P); (ATPEP12); (PEP12); (ATSYP21)"]
["AT1G55520","blue","TATA-box binding protein. Required for basal transcription. Acts facilitating the recruitment of TFIID to the promoter, which together with the RNA polymerase form the preinitiation complex.","TATA BINDING PROTEIN 2 (TBP2)","TATA BINDING PROTEIN 2 (TBP2);A. THALIANA TATA BINDING PROTEIN 2 (ATTBP2)"]
["AT1G02680","blue","Encodes a TBP-Associated Factor (TAF) that functions together with PRC2 in transcriptional regulation during seed development.","TBP-ASSOCIATED FACTOR 13 (TAF13)","TBP-ASSOCIATED FACTOR 13 (TAF13)"]
["AT1G49950","blue","Encodes a telomeric DNA binding protein and Single Myb Histone (SMH) gene family member. In vitro, an N-terminal Myb domain enables it to interact with double-stranded telomeric repeats.Mutations in TRB1 and TRB3 enhance the lhp1 mutant phenotype. Triple mutants are more strongly affected than the respective double mutants with lhp1. TRB1 binds non-H3K27me3 target genes predominantly at the transcription start sites and its presence increases the expression of several of these targets, enriched for functions of primary metabolism. At H3K27me3 target genes, TRB1 binding is more distributed across gene bodies and at extended promoter regions, corresponding to an enrichment of putative binding sites \"RMCCTAR\". At these genes, TRB1 particiaptes in the repression because several direct targets are further upregulated in trb1 lhp1 double mutants as compared to lhp1 mutants.","TELOMERE REPEAT BINDING FACTOR 1 (TRB1)","TELOMERE REPEAT BINDING FACTOR 1 (TRB1);TELOMERE REPEAT BINDING FACTOR 1 (ATTRB1)"]
["AT5G60220","blue","Member of TETRASPANIN family","TETRASPANIN4 (TET4)","TETRASPANIN4 (TET4)"]
["AT1G19730","blue","encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.","(ATTRX4)","THIOREDOXIN H-TYPE 4 (ATH4); (ATTRX4)"]
["AT1G76760","blue","Encodes a y-type thioredoxin (Trx-y1) localized in chloroplast stroma.","THIOREDOXIN Y1 (TY1)","THIOREDOXIN Y1 (ATY1);THIOREDOXIN Y1 (TRX-Y1);THIOREDOXIN Y1 (TY1)"]
["AT5G01500","blue","encodes an ATP/ADP carrier that is located to the thylakoid membrane involved in providing ATP during thylakoid biogenesis and turnover The mRNA is cell-to-cell mobile.","THYLAKOID ATP/ADP CARRIER (TAAC)","THYLAKOID ATP/ADP CARRIER (TAAC)"]
["AT2G27170","blue","Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment.","TITAN7 (TTN7)","TITAN7 (TTN7);STRUCTURAL MAINTENANCE OF CHROMOSOMES 3 (SMC3)"]
["AT3G54670","blue","Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment.","TITAN8 (TTN8)","TITAN8 (TTN8);STRUCTURAL MAINTENANCE OF CHROMOSOMES 1 (SMC1); (ATSMC1)"]
["AT1G14530","blue","tobamovirus multiplication-like protein (DUF1084);(source:Araport11)","TOM THREE HOMOLOG 1 (THH1)","TOM THREE HOMOLOG 1 (THH1)"]
["AT1G06210","blue","Encodes a member of the Arabidopsis TOL (TOM1-LIKE) family of ubiquitin binding proteins that acts redundantly in the recognition and further endocytic sorting of a PIN-FORMED (PIN)-type auxin carrier protein at the plasma membrane, modulating dynamic auxin distribution and associated growth responses.","TOM1-LIKE 2 (TOL2)","TOM1-LIKE 2 (TOL2)"]
["AT1G76970","blue","Encodes a member of the Arabidopsis TOL (TOM1-LIKE) family of ubiquitin binding proteins that acts redundantly in the recognition and further endocytic sorting of a PIN-FORMED (PIN)-type auxin carrier protein at the plasma membrane, modulating dynamic auxin distribution and associated growth responses.","TOM1-LIKE 4 (TOL4)","TOM1-LIKE 4 (TOL4)"]
["AT5G63640","blue","Encodes a member of the Arabidopsis TOL (TOM1-LIKE) family of ubiquitin binding proteins that acts redundantly in the recognition and further endocytic sorting of a PIN-FORMED (PIN)-type auxin carrier protein at the plasma membrane, modulating dynamic auxin distribution and associated growth responses.","TOM1-LIKE 5 (TOL5)","TOM1-LIKE 5 (TOL5)"]
["AT5G40930","blue","Form of TOM20, which is a component of the TOM complex involved in transport of nuclear-encoded mitochondrial proteins","TRANSLOCASE OF OUTER MEMBRANE 20-4 (TOM20-4)","TRANSLOCASE OF OUTER MEMBRANE 20-4 (TOM20-4)"]
["AT1G06910","blue","Arabidopsis thaliana myb family transcription factor (At1g06910)","TRF-LIKE 7 (TRFL7)","TRF-LIKE 7 (TRFL7)"]
["AT1G31600","blue","Dioxygenase involved in wobble uridine modifications.","(ALKBH8)","TRNA METHYLTRANSFERASE 9 (TRM9);ARABIDOPSIS THALIANA TRNA METHYLTRANSFERASE 9 (AtTRM9); (ATALKBH8); (ALKBH8)"]
["AT2G27760","blue","Encodes tRNA isopentenyltransferase, similar to yeast MOD5.","TRNAISOPENTENYLTRANSFERASE 2 (IPT2)","TRNAISOPENTENYLTRANSFERASE 2 (ATIPT2); (IPPT);TRNAISOPENTENYLTRANSFERASE 2 (IPT2)"]
["AT5G04260","blue","Encodes a thioredoxin (WCRKC2) localized in chloroplast stroma. Contains a WCRKC motif. Functions in redox cascade with 2CPA and 2CPB via the ferredoxin-thioredoxin reductase (FTR)/thioredoxin (Trx) pathway to mediate the light-responsive reductive control of target proteins. Oxidizes redox-regulated proteins.","WCRKC THIOREDOXIN 2 (WCRKC2)","TRX-LIKE 2.2 (TRXL2.2);WCRKC THIOREDOXIN 2 (WCRKC2)"]
["AT4G27070","blue","Tryptophan synthase beta. Expressed at low levels in all tissues. The mRNA is cell-to-cell mobile.","TRYPTOPHAN SYNTHASE BETA-SUBUNIT 2 (TSB2)","TRYPTOPHAN SYNTHASE BETA-SUBUNIT 2 (TSB2)"]
["AT2G36960","blue","Arabidopsis thaliana myb/SANT domain protein","TSL-KINASE INTERACTING PROTEIN 1 (TKI1)","TSL-KINASE INTERACTING PROTEIN 1 (TKI1)"]
["AT5G64510","blue","Encodes Tunicamycin Induced 1(TIN1), a plant-speci\u001ec ER stress-inducible protein. TIN1 mutation affects pollen surface morphology. Transcriptionally induced by treatment with the N-linked glyclsylation inhibitor tunicamycin.","TUNICAMYCIN INDUCED 1 (TIN1)","TUNICAMYCIN INDUCED 1 (TIN1)"]
["AT3G62260","blue","Type 2C protein phosphatase (PP2C) which negatively regulates AtHKT1;1 activity and thus determines systemic Na+ allocation during salt stress.","TYPE 2C PROTEIN PHOSPHATASE 49 (PP2C49)","TYPE 2C PROTEIN PHOSPHATASE 49 (PP2C49)"]
["AT4G23910","blue","UAP56-interacting factor2, binds single stranded RNA and, along with UIEF1,,appears to play a role in nuclear export of RNA.","UAP56-INTERACTING EXPORT FACTOR 2 (UIEF2)","UAP56-INTERACTING EXPORT FACTOR 2 (UIEF2)"]
["AT2G21270","blue","ubiquitin fusion degradation 1;(source:Araport11)","UBIQUITIN FUSION DEGRADATION 1 (UFD1)","UBIQUITIN FUSION DEGRADATION 1 (UFD1)"]
["AT5G56150","blue","ubiquitin-conjugating enzyme 30;(source:Araport11)","UBIQUITIN-CONJUGATING ENZYME 30 (UBC30)","UBIQUITIN-CONJUGATING ENZYME 30 (UBC30)"]
["AT5G50430","blue","ubiquitin-conjugating enzyme 33;(source:Araport11)","UBIQUITIN-CONJUGATING ENZYME 33 (UBC33)","UBIQUITIN-CONJUGATING ENZYME 33 (UBC33)"]
["AT5G06600","blue","Encodes a ubiquitin-specific protease which together with UBP13 deubiquitinates DA1, DAR1 and DAR2, hence reducing their peptidase activity. Works upstream of DA1, DAR1 and DAR2 to restrict their protease activity and hence fine-tune plant growth and development.","UBIQUITIN-SPECIFIC PROTEASE 12 (UBP12)","UBIQUITIN-SPECIFIC PROTEASE 12 (UBP12); (AtUBP12)"]
["AT4G24560","blue","Encodes a ubiquitin-specific protease. There is no evidence for a phenotype in ubp16-1 mutants, however, double mutant analysis with ubp15 mutants reveals a role for UBP16 in plant development and cell proliferation.","UBIQUITIN-SPECIFIC PROTEASE 16 (UBP16)","UBIQUITIN-SPECIFIC PROTEASE 16 (UBP16)"]
["AT5G03490","blue","Encodes a dihydroxybenzoic acid (DHBA) glycosyltransferase. The Col-0 enzyme is responsible for biosynthesis of 2,3-DHBA xyloside and 2,5-DHBA xyloside. The Col-0 enzyme is specific for UDP-xylose and the C24 enzyme uses both UDP-glucose and UDP-xylose. This difference in sugar donor specificity was shown to be largely due to a single amino acid change between the two isoforms.","UDP GLYCOSYLTRANSFERASE 89A2 (UGT89A2)","UDP GLYCOSYLTRANSFERASE 89A2 (UGT89A2)"]
["AT4G32272","blue","Golgi-localized nucleotide sugar (UDP-GlcNAc) transporter that delivers an essential substrate for the maturation of N-glycans and the GIPC class of sphingolipids.","UDP-GLCNAC TRANSPORTER 1 (UGNT1)","UDP-GLCNAC TRANSPORTER 1 (UGNT1)"]
["AT3G27440","blue","One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.","URIDINE KINASE-LIKE 5 (UKL5)","URIDINE KINASE-LIKE 5 (UKL5)"]
["AT1G43650","blue","nodulin MtN21-like transporter family protein","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 22 (UMAMIT22)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 22 (UMAMIT22)"]
["AT2G32760","blue","Homolog of yeast VPS38P. Interacts with PI3K.Mutants have defects in late endosome morphology and retromer function.","VACUOLAR SORTING RECEPTOR 38 (VPS38)","VACUOLAR SORTING RECEPTOR 38 (VPS38);UNFLATTENED AND SMALL LEAVES 1 (USL1)"]
["AT5G28040","blue","Member of the GeBP/GPL family of leucine zipper transcription factors. VPF4 interacts with the F-box proteins from A.tumefaciens VirF and VBF. Over expression results in decreased tumor formation upon Agrobacterium infection. Mutants show changes in the level of expression of defense response genes.","VIRF INTERACTING PROTEIN 4 (VFP4)","VIRF INTERACTING PROTEIN 4 (VFP4)"]
["AT3G07760","blue","Ortholog of Peach WEEP gene containing a sterile alpha motif. In peach, WEEP is responsible for pendulous branching phenotype. However in Arabidopsis no morphological branching defect has been observed in mutant lines.","WEEP (WEEP)","WEEP (WEEP)"]
["AT5G35690","blue","WT-like growth phenotype mutants of WSS1B do not display hypersensitivities after treatment with DNA-Protein crosslink inducing agents like camptothecin or cis-platin.","WSS1/SPRTN TYPE REPAIR PROTEASE B (WSS1B)","WSS1/SPRTN TYPE REPAIR PROTEASE B (WSS1B)"]
["AT5G57550","blue","xyloglucan endotransglycosylase-related protein (XTR3)","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 25 (XTH25)","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 25 (XTH25);XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3 (XTR3)"]
["AT1G65730","blue","Arabidopsis thaliana metal-nicotianamine transporter YSL4","YELLOW STRIPE LIKE 7 (YSL7)","YELLOW STRIPE LIKE 7 (YSL7)"]
["AT4G25440","blue","zinc finger WD40 repeat protein 1;(source:Araport11)","ZINC FINGER WD40 REPEAT PROTEIN 1 (ZFWD1)","ZINC FINGER WD40 REPEAT PROTEIN 1 (ZFWD1); (ATC3H48)"]
["AT1G49590","blue","Encodes a novel nucleic acid-binding protein that is required for both RdDM (RNA-directed DNA methylation) and pre-mRNA splicing.","ZINC-FINGER AND OCRE DOMAIN-CONTAINING PROTEIN 1 (ZOP1)","ZINC-FINGER AND OCRE DOMAIN-CONTAINING PROTEIN 1 (ZOP1)"]
["AT5G47210","brown","Hyaluronan / mRNA binding family;(source:Araport11)"]
["AT1G50450","brown","Dehydrogenase located in chloroplast."]
["AT2G26270","brown","BRCT domain DNA repair protein;(source:Araport11)"]
["AT4G26210","brown","Mitochondrial ATP synthase subunit G protein;(source:Araport11)"]
["AT3G04650","brown","FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11)"]
["AT5G05990","brown","Mitochondrial glycoprotein family protein;(source:Araport11)"]
["AT5G18210","brown","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT5G09315","brown","vacuolar sorting protein 9 domain protein;(source:Araport11)"]
["AT1G58807","brown","Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11)"]
["AT3G49470","brown","nascent polypeptide-associated complex subunit alpha-like protein 2;(source:Araport11)"]
["AT3G07670","brown","Rubisco methyltransferase family protein;(source:Araport11)"]
["AT4G05631","brown","hypothetical protein;(source:Araport11)"]
["AT1G31910","brown","GHMP kinase family protein;(source:Araport11)"]
["AT4G37190","brown","plasma membrane, autoregulation-binding site, misato segment II, myosin-like, tubulin/FtsZ protein;(source:Araport11)"]
["AT3G44330","brown","M28 Zn-peptidase nicastrin;(source:Araport11)"]
["AT5G48620","brown","Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11)"]
["AT3G11070","brown","Outer membrane OMP85 family protein;(source:Araport11)"]
["AT4G05060","brown","PapD-like superfamily protein;(source:Araport11)"]
["AT3G07270","brown","GTP cyclohydrolase I;(source:Araport11)"]
["AT2G14840","brown","pseudogene of phosphoenolpyruvate carboxykinase 1;(source:Araport11)"]
["AT5G26110","brown","Protein kinase superfamily protein;(source:Araport11)"]
["AT4G30910","brown","Cytosol aminopeptidase family protein;(source:Araport11)"]
["AT3G51140","brown","Located in chloroplast, expressed during early development."]
["AT4G35930","brown","F-box family protein which is required to repress excessive divisions in stomatal development."]
["AT4G33540","brown","metallo-beta-lactamase family protein;(source:Araport11)"]
["AT2G18940","brown","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G18180","brown","H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein;(source:Araport11)"]
["AT1G25275","brown","Thionin-like gene involved in resistance against the beet cyst nematode (Heterodera schachtii)."]
["AT4G14615","brown","sporulation-specific protein;(source:Araport11)"]
["AT5G24060","brown","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G45500","brown","RNI-like superfamily protein;(source:Araport11)"]
["AT1G29240","brown","transcription initiation factor TFIID subunit, putative (DUF688);(source:Araport11)"]
["AT4G35520","brown","DNA mismatch repair protein similar to MutL. Required for normal levels of meiotic crossovers"]
["AT5G64380","brown","Inositol monophosphatase family protein;(source:Araport11)"]
["AT5G48530","brown","hypothetical protein;(source:Araport11)"]
["AT2G44870","brown","replicase polyprotein 1ab protein;(source:Araport11)"]
["AT2G25670","brown","hypothetical protein;(source:Araport11)"]
["AT3G63540","brown","Conceptual translation of this open reading frame gave the sequence of a 229-residue hypothetical protein that contains the same sequence as the mature A. thaliana chloroplast luminal 19-kDa protein linked to a putative signal sequence. Protein P82658."]
["AT3G59020","brown","ARM repeat superfamily protein;(source:Araport11)"]
["AT4G33945","brown","ARM repeat superfamily protein;(source:Araport11)"]
["AT3G04600","brown","Nucleotidylyl transferase superfamily protein;(source:Araport11)"]
["AT5G28500","brown","rubisco accumulation factor-like protein;(source:Araport11)"]
["AT1G07950","brown","Surfeit locus protein 5 subunit 22 of Mediator complex;(source:Araport11)"]
["AT5G55530","brown","Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11)"]
["AT1G28190","brown","PADRE protein up-regulated after infection by S. sclerotiorum."]
["AT4G26965","brown","NADH:ubiquinone oxidoreductase, 17.2kDa subunit;(source:Araport11)"]
["AT3G58470","brown","nucleic acid binding / methyltransferase;(source:Araport11)"]
["AT2G39670","brown","Radical SAM superfamily protein;(source:Araport11)"]
["AT2G17020","brown","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT1G48450","brown","alanine-tRNA ligase, putative (DUF760);(source:Araport11)"]
["AT1G71080","brown","RNA polymerase II transcription elongation factor;(source:Araport11)"]
["AT3G02200","brown","Proteasome component (PCI) domain protein;(source:Araport11)"]
["AT1G78800","brown","UDP-Glycosyltransferase superfamily protein;(source:Araport11)"]
["AT2G42920","brown","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)"]
["AT1G48660","brown","Auxin-responsive GH3 family protein;(source:Araport11)"]
["AT4G07950","brown","DNA-directed RNA polymerase, subunit M, archaeal;(source:Araport11)"]
["AT5G16140","brown","Peptidyl-tRNA hydrolase family protein;(source:Araport11)"]
["AT1G75800","brown","Pathogenesis-related thaumatin superfamily protein;(source:Araport11)"]
["AT1G16480","brown","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G37200","brown","Uncharacterized protein family (UPF0497);(source:Araport11)"]
["AT4G02725","brown","spindle pole body-associated protein;(source:Araport11)"]
["AT1G71000","brown","Chaperone DnaJ-domain superfamily protein;(source:Araport11)"]
["AT5G59500","brown","protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase;(source:Araport11)"]
["AT2G38695","brown","Gag-Pol polyprotein/retrotransposon;(source:Araport11)"]
["AT1G24050","brown","RNA-processing, Lsm domain-containing protein;(source:Araport11)"]
["AT5G65960","brown","GTP binding protein;(source:Araport11)"]
["AT5G44450","brown","alpha amino-terminal protein methyltransferase;(source:Araport11)"]
["AT1G77500","brown","DUF630 family protein, putative (DUF630 and DUF632);(source:Araport11)"]
["AT1G06190","brown","Encodes a novel ribonucleic acid-binding protein that interacts with the endonuclease RNase E and supports its function in processing plastid ribonucleic acids."]
["AT5G61360","brown","hypothetical protein;(source:Araport11)"]
["AT4G38225","brown","glycerol kinase;(source:Araport11)"]
["AT5G02710","brown","zinc/iron-chelating domain protein;(source:Araport11)"]
["AT1G55880","brown","Pyridoxal-5-phosphate-dependent enzyme family protein;(source:Araport11)"]
["AT1G78150","brown","N-lysine methyltransferase;(source:Araport11)"]
["AT2G48121","brown","ribonuclease III family protein;(source:Araport11)"]
["AT1G51980","brown","Insulinase (Peptidase family M16) protein;(source:Araport11)"]
["AT5G24165","brown","hypothetical protein;(source:Araport11)"]
["AT2G30695","brown","bacterial trigger factor;(source:Araport11)"]
["AT1G22570","brown","Major facilitator superfamily protein;(source:Araport11)"]
["AT2G35920","brown","RNA helicase family protein;(source:Araport11)"]
["AT3G63510","brown","FMN-linked oxidoreductases superfamily protein;(source:Araport11)"]
["AT5G39080","brown","HXXXD-type acyl-transferase family protein;(source:Araport11)"]
["AT2G22890","brown","Kua-ubiquitin conjugating enzyme hybrid localization domain-containing protein;(source:Araport11)"]
["AT3G57010","brown","Calcium-dependent phosphotriesterase superfamily protein;(source:Araport11)"]
["AT4G00520","brown","Acyl-CoA thioesterase family protein;(source:Araport11)"]
["AT1G14810","brown","encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis"]
["AT5G24690","brown","Membrane protein"]
["AT1G77610","brown","EamA-like transporter family protein;(source:Araport11)"]
["AT5G10780","brown","ER membrane protein complex subunit-like protein;(source:Araport11)"]
["AT2G04360","brown","transmembrane protein;(source:Araport11)"]
["AT1G20816","brown","outer envelope pore-like protein;(source:Araport11)"]
["AT5G14910","brown","Heavy metal transport/detoxification superfamily protein;(source:Araport11)"]
["AT1G16550","brown","Possibly not a pseudogene based on evidence for transcription (RNA-seq) and translation (Ribo-seq) described in PMID:27791167"]
["AT3G12760","brown","defective in cullin neddylation protein;(source:Araport11)"]
["AT2G28600","brown","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT4G15820","brown","ABC subfamily C protein;(source:Araport11)"]
["AT4G16840","brown","transmembrane protein;(source:Araport11)"]
["AT1G64355","brown","Membrane protein (ECM1), located in chloroplast, expressed during early development."]
["AT1G06900","brown","Insulinase (Peptidase family M16) family protein;(source:Araport11)"]
["AT3G05100","brown","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT1G15885","brown","hypothetical protein;(source:Araport11)"]
["AT3G59980","brown","Nucleic acid-binding, OB-fold-like protein;(source:Araport11)"]
["AT2G40760","brown","Rhodanese/Cell cycle control phosphatase superfamily protein;(source:Araport11)"]
["AT4G14305","brown","Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein;(source:Araport11)"]
["AT5G14840","brown","pseudogene of hypothetical protein;(source:Araport11)"]
["AT4G11175","brown","Nucleic acid-binding, OB-fold-like protein;(source:Araport11)"]
["AT2G11910","brown","hypothetical protein;(source:Araport11)"]
["AT1G04140","brown","Transducin family protein / WD-40 repeat family protein;(source:Araport11)"]
["AT4G26990","brown","polyadenylate-binding protein interacting protein;(source:Araport11)"]
["AT2G25830","brown","YebC-like protein;(source:Araport11)"]
["AT3G01380","brown","sulfatase and phosphatidylinositolglycan class N domain-containing protein;(source:Araport11)"]
["AT1G01770","brown","propionyl-CoA carboxylase;(source:Araport11)"]
["AT1G13160","brown","ARM repeat superfamily protein;(source:Araport11)"]
["AT3G43955","brown","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 0. P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea);(source:TAIR10)"]
["AT5G67220","brown","FMN-linked oxidoreductases superfamily protein;(source:Araport11)"]
["AT1G49600","brown","RNA-binding protein 47A;(source:Araport11)"]
["AT4G38020","brown","tRNA/rRNA methyltransferase (SpoU) family protein;(source:Araport11)"]
["AT3G14960","brown","Galactosyltransferase family protein;(source:Araport11)"]
["AT5G23510","brown","hypothetical protein;(source:Araport11)"]
["AT5G48590","brown","phosphoserine aminotransferase, putative (DUF760);(source:Araport11)"]
["AT1G52245","brown","dynein light chain LC6, flagellar outer arm-like protein;(source:Araport11)"]
["AT4G13780","brown","methionine-tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS;(source:Araport11)"]
["AT2G34300","brown","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT1G59124","brown","Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11)"]
["AT5G08340","brown","Nucleotidylyl transferase superfamily protein;(source:Araport11)"]
["AT3G01640","brown","AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP."]
["AT3G20720","brown","amino-terminal region of chorein;(source:Araport11)"]
["AT1G18170","brown","FKBP-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11)"]
["AT3G12650","brown","transmembrane protein;(source:Araport11)"]
["AT3G19870","brown","AP-5 complex subunit beta-like protein;(source:Araport11)"]
["AT4G32130","brown","ER membrane protein complex subunit-like protein (DUF2012);(source:Araport11)"]
["AT4G02660","brown","Beige/BEACH and WD40 domain-containing protein;(source:Araport11)"]
["AT1G03370","brown","C2 calcium/lipid-binding and GRAM domain containing protein;(source:Araport11)"]
["AT1G51550","brown","Kelch repeat-containing F-box family protein;(source:Araport11)"]
["AT1G72550","brown","tRNA synthetase beta subunit family protein;(source:Araport11)"]
["AT4G36390","brown","Methylthiotransferase;(source:Araport11)"]
["AT5G25754","brown","RNA polymerase I-associated factor PAF67;(source:Araport11)"]
["AT5G25757","brown","RNA polymerase I-associated factor PAF67;(source:Araport11)"]
["AT1G72070","brown","Chaperone DnaJ-domain superfamily protein;(source:Araport11)"]
["AT1G09570","brown","Light-labile cytoplasmic red/far-red light photoreceptor involved in the regulation of photomorphogenesis. It exists in two inter-convertible forms: Pr and Pfr (active) and functions as a dimer.The N terminus carries a single tetrapyrrole chromophore, and the C terminus is involved in dimerization. It is the sole photoreceptor mediating the FR high irradiance response (HIR). Major regulator in red-light induction of phototropic enhancement. Involved in the regulation of de-etiolation. Involved in gravitropism and phototropism. Requires FHY1 for nuclear accumulation."]
["AT4G39550","brown","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT1G63660","brown","GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase;(source:Araport11)"]
["AT3G13920","brown","eukaryotic translation initiation factor 4A-1"]
["AT2G19160","brown","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT5G52450","brown","MATE efflux family protein;(source:Araport11)"]
["AT5G15390","brown","tRNA/rRNA methyltransferase (SpoU) family protein;(source:Araport11)"]
["AT3G47800","brown","Galactose mutarotase-like superfamily protein;(source:Araport11)"]
["AT1G43900","brown","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT4G23730","brown","Galactose mutarotase-like superfamily protein;(source:Araport11)"]
["AT4G10480","brown","Nascent polypeptide-associated complex (NAC), alpha subunit family protein;(source:Araport11)"]
["AT4G28070","brown","AFG1-like ATPase family protein;(source:Araport11)"]
["AT4G20325","brown","ribonuclease H2 subunit B;(source:Araport11)"]
["AT1G26740","brown","Ribosomal L32p protein family;(source:Araport11)"]
["AT4G26870","brown","Class II aminoacyl-tRNA and biotin synthetases superfamily protein;(source:Araport11)"]
["AT5G06590","brown","hypothetical protein;(source:Araport11)"]
["AT4G24750","brown","Rhodanese/Cell cycle control phosphatase superfamily protein;(source:Araport11)"]
["AT2G39920","brown","HAD superfamily, subfamily IIIB acid phosphatase;(source:Araport11)"]
["AT2G38950","brown","Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein;(source:Araport11)"]
["AT2G43630","brown","nucleusenvelope protein;(source:Araport11)"]
["AT4G01860","brown","Transducin family protein / WD-40 repeat family protein;(source:Araport11)"]
["AT4G27870","brown","Vacuolar iron transporter (VIT) family protein;(source:Araport11)"]
["AT3G06270","brown","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT2G41410","brown","Calcium-binding EF-hand family protein;(source:Araport11)"]
["AT1G71110","brown","transmembrane protein;(source:Araport11)"]
["AT3G29230","brown","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G12280","brown","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT4G38120","brown","ARM repeat superfamily protein;(source:Araport11)"]
["AT3G49000","brown","RNA polymerase III subunit RPC82 family protein;(source:Araport11)"]
["AT5G46420","brown","16S rRNA processing protein RimM family;(source:Araport11)"]
["AT1G54920","brown","hypothetical protein;(source:Araport11)"]
["AT1G24580","brown","RING/U-box superfamily protein;(source:Araport11)"]
["AT4G23530","brown","ROH1, putative (DUF793);(source:Araport11)"]
["AT4G02210","brown","Myb/SANT-like DNA-binding domain protein;(source:Araport11)"]
["AT5G08670","brown","Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level."]
["AT1G72500","brown","inter alpha-trypsin inhibitor, heavy chain-like protein;(source:Araport11)"]
["AT4G10320","brown","tRNA synthetase class I (I, L, M and V) family protein;(source:Araport11)"]
["AT4G11300","brown","ROH1, putative (DUF793);(source:Araport11)"]
["AT1G51730","brown","Ubiquitin-conjugating enzyme family protein;(source:Araport11)"]
["AT1G59960","brown","NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11)"]
["AT3G56570","brown","SET domain-containing protein;(source:Araport11)"]
["AT3G32930","brown","Protein of unknown function. Locus is correlated with bacterial hypersensitive response, expression is reduced after injection with avrRpm1."]
["AT5G40810","brown","Cytochrome C1 family;(source:Araport11)"]
["AT2G41620","brown","Nucleoporin interacting component (Nup93/Nic96-like) family protein;(source:Araport11)"]
["AT1G70150","brown","zinc ion binding protein;(source:Araport11)"]
["AT1G15002","brown","Natural antisense transcript overlaps with AT1G15000;(source:Araport11)"]
["AT5G10080","brown","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT3G04450","brown","Homeodomain-like superfamily protein;(source:Araport11)"]
["AT5G05240","brown","cation-transporting ATPase;(source:Araport11)"]
["AT4G08330","brown","hypothetical protein;(source:Araport11)"]
["AT5G48730","brown","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G20585","brown","nuclear fusion defective 6;(source:Araport11)"]
["AT5G47030","brown","Encodes the mitochondrial ATP synthase subunit delta."]
["AT1G16350","brown","Aldolase-type TIM barrel family protein;(source:Araport11)"]
["AT5G03430","brown","phosphoadenosine phosphosulfate (PAPS) reductase family protein;(source:Araport11)"]
["AT4G14270","brown","Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins."]
["AT3G58430","brown","MATH domain/coiled-coil protein;(source:Araport11)"]
["AT5G48960","brown","HAD-superfamily hydrolase, subfamily IG, 5-nucleotidase;(source:Araport11)"]
["AT3G55520","brown","FKBP-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11)"]
["AT5G07810","brown","SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein;(source:Araport11)"]
["AT5G26749","brown","C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11)"]
["AT5G11250","brown","Encodes an atypical TIR-NBS-LRR protein that is involved in stress responses. Loss of function alleles overproduce stress hormones JA,SA, ABA, and ET."]
["AT4G32340","brown","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G04100","brown","MATE efflux family protein;(source:Araport11)"]
["AT5G19750","brown","Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein;(source:Araport11)"]
["AT2G32650","brown","RmlC-like cupins superfamily protein;(source:Araport11)"]
["AT2G01760","brown","member of Response Regulator: B- Type"]
["AT5G41400","brown","RING/U-box superfamily protein;(source:Araport11)"]
["AT5G02860","brown","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G12790","brown","DNA ligase-like protein;(source:Araport11)"]
["AT2G13580","brown","pseudogene of hypothetical protein;(source:Araport11)"]
["AT5G03570","brown","Encodes FPN2, a tonoplast localized nickel transport protein. FPN2 is one of the Arabidopsis orthologs (AT2G38460/IREG1/FPN1 and AT5G03570/IREG2/FPN2) the iron efflux transporter ferroportin (FPN) identified in animals."]
["AT5G51960","brown","complex 1 protein, LYR family protein;(source:Araport11)"]
["AT2G41020","brown","WW domain-containing protein;(source:Araport11)"]
["AT1G72090","brown","Methylthiotransferase;(source:Araport11)"]
["AT3G27880","brown","hypothetical protein (DUF1645);(source:Araport11)"]
["AT2G33855","brown","transmembrane protein;(source:Araport11)"]
["AT1G23850","brown","transmembrane protein;(source:Araport11)"]
["AT1G19600","brown","pfkB-like carbohydrate kinase family protein;(source:Araport11)"]
["AT5G20400","brown","encodes a protein whose sequence is similar to flavanone 3 hydroxylase from Malus. The mRNA is cell-to-cell mobile."]
["AT3G10270","brown","Protein targeting to mitochondria is influenced by UTR sequences."]
["AT3G04480","brown","endoribonuclease;(source:Araport11)"]
["AT4G15520","brown","tRNA/rRNA methyltransferase (SpoU) family protein;(source:Araport11)"]
["AT2G26240","brown","Transmembrane proteins 14C;(source:Araport11)"]
["AT5G37475","brown","Translation initiation factor eIF3 subunit;(source:Araport11)"]
["AT5G60190","brown","Encodes a protein that can cleave residues from the C-terminus of RUB1 to prepare it for conjugation to target proteins."]
["AT5G53620","brown","RNA polymerase II degradation factor;(source:Araport11)"]
["AT3G52170","brown","DNA binding protein;(source:Araport11)"]
["AT4G07825","brown","transmembrane protein;(source:Araport11)"]
["AT2G44040","brown","Dihydrodipicolinate reductase, bacterial/plant;(source:Araport11)"]
["AT3G21790","brown","UDP-Glycosyltransferase superfamily protein;(source:Araport11)"]
["AT3G42806","brown","transposable_element_gene;(source:Araport11);Mutator-like transposase family, has a 2.2e-53 P-value blast match to Q9SHN7 /450-633 Pfam PF03108 MuDR family transposase (MuDr-element domain);(source:TAIR10)"]
["AT5G65760","brown","Serine carboxypeptidase S28 family protein;(source:Araport11)"]
["AT3G12030","brown","transmembrane/coiled-coil protein (Protein of unknown function DUF106, transmembrane);(source:Araport11)"]
["AT2G21130","brown","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11)"]
["AT1G80770","brown","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT3G06060","brown","Encodes one of the Arabidopsis proteins (At3g06060/TSC10A and At5g19200/TSC10B) with significant similarity to the yeast 3-ketodihydrosphinganine (3-KDS) reductase, Tsc10p. Both TSC10A and TSC10B are bona fide 3-KDS reductase as shown by complementation experiment in yeast."]
["AT1G02110","brown","bZIP domain class transcription factor (DUF630 and DUF632);(source:Araport11)"]
["AT1G15350","brown","DUF4050 family protein;(source:Araport11)"]
["AT1G48650","brown","DEA(D/H)-box RNA helicase family protein;(source:Araport11)"]
["AT3G02060","brown","DEAD/DEAH box helicase;(source:Araport11)"]
["AT1G08592","brown","Natural antisense transcript overlaps with AT1G08590;(source:Araport11)"]
["AT1G69587","brown","Natural antisense transcript overlaps with AT1G69588;(source:Araport11)"]
["AT2G44920","brown","Encodes a pentapeptide-repeat protein (PRP) composed of 25 repeats capped by N- and C-terminal a-helices. Unlike other PRPs, At2g44920 consists exclusively of type II b-turns"]
["AT5G45060","brown","Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11)"]
["AT1G66060","brown","hypothetical protein (DUF577);(source:Araport11)"]
["AT5G06660","brown","transmembrane/coiled-coil protein (Protein of unknown function DUF106, transmembrane);(source:Araport11)"]
["AT5G25020","brown","enhanced disease resistance-like protein (DUF1336);(source:Araport11)"]
["AT2G35640","brown","Homeodomain-like superfamily protein;(source:Araport11)"]
["AT3G08980","brown","Peptidase S24/S26A/S26B/S26C family protein;(source:Araport11)"]
["AT4G37510","brown","Ribonuclease III family protein;(source:Araport11)"]
["AT5G24490","brown","30S ribosomal protein;(source:Araport11)"]
["AT5G08680","brown","Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level. The mRNA is cell-to-cell mobile."]
["AT1G09010","brown","glycoside hydrolase family 2 protein;(source:Araport11)"]
["AT1G67660","brown","Restriction endonuclease, type II-like superfamily protein;(source:Araport11)"]
["AT1G77250","brown","RING/FYVE/PHD-type zinc finger family protein;(source:Araport11)"]
["AT1G64430","brown","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT4G38215","brown","Natural antisense transcript overlaps with AT4G38210;(source:Araport11)"]
["AT3G58610","brown","Acetohydroxy acid isomeroreductase."]
["AT3G08570","brown","Phototropic-responsive NPH3 family protein;(source:Araport11)"]
["AT1G78915","brown","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G58830","brown","Encodes a phosphatidylglycerophosphate (PGP) phosphatase that localizes to chloroplasts in above ground plant parts and mitochondria in root tips and root hairs and is involved in the synthesis of plastidial Phosphatidylglycerol (PG). This enzyme is responsible for the second step of PG synthesis. Mutants show reduced root growth."]
["AT5G37130","brown","Protein prenylyltransferase superfamily protein;(source:Araport11)"]
["AT4G26240","brown","histone-lysine N-methyltransferase;(source:Araport11)"]
["AT5G27890","brown","hypothetical protein;(source:Araport11)"]
["AT1G69252","brown","other_RNA;(source:Araport11)"]
["AT1G70650","brown","Ran BP2/NZF zinc finger-like superfamily protein;(source:Araport11)"]
["AT3G49790","brown","Carbohydrate-binding protein;(source:Araport11)"]
["AT3G58180","brown","ARM repeat superfamily protein;(source:Araport11)"]
["AT1G53120","brown","RNA binding protein located in the chloroplast."]
["AT3G60370","brown","Encodes an immunophilin, FKBP20-2, that belongs to the FK-506 binding protein (FKBP) subfamily functioning as peptidyl-prolyl isomerases (PPIases) in protein folding. FKBP20-2 has a unique pair of cysteines at the C terminus and was found to be reduced by thioredoxin (Trx) (itself reduced by NADPH by means of NADP-Trx reductase). The FKBP20-2 protein, which contains only two of the five amino acids required for catalysis, showed a low level of PPIase activity that was unaffected on reduction by Trx. Genetic disruption of the FKBP20-2 gene provide evidence that FKBP20-2 participates specifically in the accumulation of the PSII supercomplex in the chloroplast thylakoid lumen by means of a mechanism that has yet to be determined."]
["AT5G38640","brown","NagB/RpiA/CoA transferase-like superfamily protein;(source:Araport11)"]
["AT4G29750","brown","CRS1 / YhbY (CRM) domain-containing protein;(source:Araport11)"]
["AT3G18860","brown","transducin family protein / WD-40 repeat family protein;(source:Araport11)"]
["AT1G11480","brown","eukaryotic translation initiation factor-like protein;(source:Araport11)"]
["AT1G53450","brown","epstein-barr nuclear antigen;(source:Araport11)"]
["AT1G62780","brown","Located in thylakoid, expressed during early development."]
["AT5G04440","brown","RAP release 2, galactose-binding-like domain protein, putative (DUF1997);(source:Araport11)"]
["AT3G27180","brown","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT5G41980","brown","nuclease;(source:Araport11)"]
["AT1G20390","brown","transposable_element_gene;(source:Araport11);gypsy-like retrotransposon family, has a 1.5e-251 P-value blast match to GB:AAD19359 polyprotein (gypsy_Ty3-element) (Sorghum bicolor);(source:TAIR10)"]
["AT5G65250","brown","transmembrane protein;(source:Araport11)"]
["AT1G68500","brown","hypothetical protein;(source:Araport11)"]
["AT1G53800","brown","muscle M-line assembly protein;(source:Araport11)"]
["AT1G28070","brown","ATP-dependent RNA helicase;(source:Araport11)"]
["AT1G26460","brown","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G69020","brown","Prolyl oligopeptidase family protein;(source:Araport11)"]
["AT5G02520","brown","Arabidopsis KNL2 localizes at chromocenters during all stages of the mitotic cell cycle, except from metaphase to mid-anaphase, and its level is strictly regulated by the proteasome degradation pathway. Knockout of KNL2 via a T-DNA insertion resulted in a reduced amount of centromeric cenH3, mitotic and meiotic abnormalities, and reduced growth and fertility."]
["AT1G06240","brown","diiron containing four-helix bundle family ferritin protein, putative (Protein of unknown function DUF455);(source:Araport11)"]
["AT3G13882","brown","Ribosomal protein L34;(source:Araport11)"]
["AT5G14080","brown","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G10660","brown","transmembrane protein;(source:Araport11)"]
["AT1G15010","brown","mediator of RNA polymerase II transcription subunit;(source:Araport11)"]
["AT5G19370","brown","rhodanese-like domain-containing protein / PPIC-type PPIASE domain-containing protein;(source:Araport11)"]
["AT3G16050","brown","Encodes a protein with pyridoxal phosphate synthase activity whose transcripts were detected mostly in roots and accumulate during senescence. The protein was found in very low abundance, which prevented a specific localisation.","PYRIDOXINE BIOSYNTHESIS 1.2 (PDX1.2)","(A37);ARABIDOPSIS THALIANA PYRIDOXINE BIOSYNTHESIS 1.2 (ATPDX1.2);PYRIDOXINE BIOSYNTHESIS 1.2 (PDX1.2)"]
["AT2G32850","brown","Phosphorylates AP2M resulting in modulation of the frequency distribution of endocytosis; fine-tunes endocytosis in root to control its tropic growth.","(AAK1)","(AAK1)"]
["AT5G53540","brown","Encodes a P-loop NTPase APP1. The disruption of APP1 is accompanied by a reduction in ROS level, a rise in the rate of cell division in the quiescent center (QC) and the promotion of root distal stem cell (DSC) differentiation.","(APP1)","(APP1)"]
["AT5G64310","brown","Encodes arabinogalactan-protein (AGP1). The mRNA is cell-to-cell mobile.","ARABINOGALACTAN PROTEIN 1 (AGP1)","(ATAGP1);ARABINOGALACTAN PROTEIN 1 (AGP1)"]
["AT2G02160","brown","Non- tandem CCCH zinc finger protein.","(ATC3H17)","(ATC3H17); (C3H17)"]
["AT4G22330","brown","AtCES1 encodes a nuclear and endoplasmic reticulum localized Acyl-CoA independent ceramide synthase that is involved in sphingolipid metabolism, disease resistance, nutrient limitation, and response to salt stress. Facilitates adaptation to environmental stresses by regulating autophagy.","(ATCES1)","(ATCES1);CERAMIDASE (ATACER)"]
["AT4G14510","brown","Encodes a CRM domain protein CFM3b. Homolog of CFM3a (AT3G23070). CFM3a is shown to function in the splicing of group IIB introns in chloroplasts.","CRM FAMILY MEMBER 3B (CFM3B)","(ATCFM3B);CRM FAMILY MEMBER 3B (CFM3B); (SPRT2)"]
["AT3G11130","brown","CHC1 heavy chain subunit of clathrin. Involved in vesicle mediated trafficking. Mutants show reduced rates of endocytosis and defects clathrin mediated exocytosis. Mutants also have increased dehydration tolerance which may be related to the overall slower stomatal aperture dynamics. Overall growth is affected.","CLATHRIN HEAVY CHAIN 1 (CHC1)","(ATCHC1);HOT ABA DEFICIENCY SUPPRESSOR 1 (HAS1);CLATHRIN HEAVY CHAIN 1 (CHC1); (HAS1)"]
["AT5G33280","brown","Voltage-gated chloride channel family protein;(source:Araport11)","CHLORIDE CHANNEL G (CLCG)","(ATCLCG);CHLORIDE CHANNEL G (CLCG)"]
["AT3G48870","brown","Encodes a nuclear encoded protein with similarity to Clpa regulatory subunit of CLP protease complex. The protein is localized to the chloroplast stroma. May function redundantly with TIC complex in chloroplast protein import.","(HSP93-III)","(ATCLPC); (ATHSP93-III); (HSP93-III);CLPC2 (ClpC2)"]
["AT5G57660","brown","CONSTANS-like 5;(source:Araport11)","CONSTANS-LIKE 5 (COL5)","(ATCOL5);CONSTANS-LIKE 5 (COL5);B-BOX DOMAIN PROTEIN 6 (BBX6)"]
["AT5G66940","brown","Encodes a nuclear localized DOF-domain binding transcription factor.","(ATDOF5.8)","(ATDOF5.8)"]
["AT1G76150","brown","Encodes a monofunctional enoyl-CoA hydratase 2, involved in the degradation of even cis-unsaturated fatty acids, gene expression is enhanced during the first 2 days of germination, as well as in senescent leaves.","ENOYL-COA HYDRATASE 2 (ECH2)","(ATECH2);ENOYL-COA HYDRATASE 2 (ECH2)"]
["AT5G05460","brown","Encodes a cytosolic beta-endo-N-acetyglucosaminidase (ENGase). ENGases N-glycans cleave the O-glycosidic linkage between the two GlcNAc residues of the N-glycan core structure and thus generate a protein with a single GlcNAc attached to asparagine.","ENDO-BETA-N-ACETYGLUCOSAMINIDASE 85A (ENGase85A)","(AtENGase85A);ENDO-BETA-N-ACETYGLUCOSAMINIDASE 85A (ENGase85A)"]
["AT4G26555","brown","Encodes a chloroplast lumen-targeted immunophilin that plays a role in the acclimation of plants under photosynthetic stress conditions, probably by regulating PsaL stability.","FK506-BINDING PROTEIN 16-1 (FKBP16-1)","(ATFKBP16-1);FK506-BINDING PROTEIN 16-1 (FKBP16-1)"]
["AT1G49180","brown","protein kinase family protein;(source:Araport11)","(ATG1T)","(ATG1T)"]
["AT2G45960","brown","a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development. Involved redundantly with PIP1;1/3/4/5 in hydraulics and carbon fixation, regulates the expression of related genes that affect plant growth and development.","PLASMA MEMBRANE INTRINSIC PROTEIN 1B (PIP1B)","(ATHH2);NAMED PLASMA MEMBRANE INTRINSIC PROTEIN 1;2 (PIP1;2);PLASMA MEMBRANE INTRINSIC PROTEIN 1B (PIP1B);TRANSMEMBRANE PROTEIN A (TMP-A)"]
["AT4G30690","brown","SVR9-LIKE1 (SVR9L1)","(ATINFC-4)","(ATINFC-4);INITIATION FACTOR 3-4 (ATIF3- 4);SVR9-LIKE1 (SVR9L)"]
["AT3G13230","brown","RNA-binding KH domain-containing protein;(source:Araport11)","(ATKH14)","(ATKH14)"]
["AT5G04430","brown","Gene model AT5G04430.1 produces active protein. (BTS1S). Binds to ToMV genomic RNA and prevents viral multiplication.","BINDING TO TOMV RNA 1L (LONG FORM) (BTR1L)","(ATKH22);BINDING TO TOMV RNA 1 (BTR1);BINDING TO TOMV RNA 1L (LONG FORM) (BTR1L)"]
["AT4G30920","brown","Encodes LAP2, an aminopeptidase playing key roles in senescence, stress response and amino acid turnover.","LEUCYL AMINOPEPTIDASE 2 (LAP2)","(AtLAP2);LEUCYL AMINOPEPTIDASE 2 (LAP2)"]
["AT1G63680","brown","Encodes AtMurE, a homolog of the bacterial MurE that catalyze the ATP-dependent formation of UDP-N-acetylmuramic acid-tripeptide in bacterial peptidoglycan biosynthesis. Localized to plastids. AtMurE is involved in chloroplast biogenesis.","(MURE)","(ATMURE);PIGMENT DEFECTIVE EMBRYO 316 (PDE316); (MURE);ALBINO OR PALE-GREEN 13 (APG13)"]
["AT3G47450","brown","Encodes a protein with similarity to the bacterial YqeH GTPase required for proper ribosome assembly. Mutant analyses show that this protein regulates growth and hormonal signaling and attenuates oxidative stress and reactive oxygen species (ROS). It also seems to be involved in regulating leaf senescence, cell death, nitric oxide biosynthesis in response to ABA but not exogenous H2O2. This protein also appears to be required for proper plastid biogenesis. Levels of several plastid-localized proteins, including RBCL, ClpP1, and the MEP biosynthesis enzymes DXS and DXR are altered in rif1-1 mutants. This protein was originally characterized as a mitrochondrial-localized nitric oxide synthase, but, the synthase activity was later disproven. In addition, new studies with GFP fusion proteins and chloroplast import assays suggest that this protein is found in chloroplasts. Its localization to the chloroplast is enhanced by S-acylation.","NO ASSOCIATED 1 (NOA1)","(ATNOS1);NITRIC OXIDE SYNTHASE 1 (NOS1); (ATNOA1);NO ASSOCIATED 1 (NOA1);RESISTANT TO INHIBITION WITH FOSMIDOMYCIN 1 (RIF1);SUPPRESSOR OF VARIEGATION 10 (SVR10)"]
["AT3G20930","brown","Encodes a unique protein that is both a member of the RIP (RNA-editing interacting protein) family and the RNA recognition motif (RRM)-containing family. It controls the editing extent of 62% of the plastid Cs targeted for editing in Arabidopsis.","(ATORRM1)","(ATORRM1)"]
["AT4G20360","brown","Nuclear transcribed, plastid localized EF-Tu translation elongation factor. Referred to as AtRabE1b in DOI:10.1104/pp.013052. However, wider community usage and more publications assign the symbol RabE1b to At5g59840.","RAB GTPASE HOMOLOG E1B (ATRABE1B)","(ATRAB8D);RAB GTPASE HOMOLOG E1B (ATRABE1B);RAB GTPASE HOMOLOG E1B (RABE1b);SUPPRESSOR OF VARIEGATION11 (SVR11); (RAB8D)"]
["AT2G31890","brown","Protein contains putative RNA binding domain. Expressed in response to Pseudomonas syringae infection. Resistance requires silencing of AtRAP suggesting it functions as a negative regulator of plant disease resistance. Alpha helical repeat protein; only member of the OPR (octotricopeptide repeat) protein family in land plants.","(RAP)","(ATRAP); (RAP)"]
["AT4G27000","brown","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)","(ATRBP45C)","(ATRBP45C)"]
["AT2G23310","brown","Encodes AtRER1C1, a Golgi membrane protein involved in returning the molecules that are exported from the endoplasmic reticulum (ER) to the Golgi apparatus back to the ER (a mechanism known as retrieval). There are two Arabidopsis homologues of AtRERC1: AtRER1A and AtRER1B.","(ATRER1C1)","(ATRER1C1)"]
["AT4G30580","brown","Encodes a plastidic lysophosphatidic acid acyltransferase (LPAAT). Is critical for chloroplasts phosphatidic acid biosynthesis. The null allele is embryo lethal.","(ATS2)","(ATS2);EMBRYO DEFECTIVE 1995 (EMB1995);LYSOPHOSPHATIDIC ACID ACYLTRANSFERASE 1 (LPAT1)"]
["AT1G55920","brown","Encodes a chloroplast/cytosol localized serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. The mRNA is cell-to-cell mobile.","SERINE ACETYLTRANSFERASE 2;1 (SERAT2;1)","(ATSAT1);SERINE ACETYLTRANSFERASE 1 (SAT1);SERINE ACETYLTRANSFERASE 2;1 (SERAT2;1);SERINE ACETYLTRANSFERASE 2;1 (ATSERAT2;1);SERINE ACETYLTRANSFERASE 5 (SAT5)"]
["AT1G05520","brown","Sec23/Sec24 protein transport family protein;(source:Araport11)","(ATSEC23B)","(ATSEC23B)"]
["AT2G21630","brown","Sec23/Sec24 protein transport family protein;(source:Araport11)","(ATSEC23C)","(ATSEC23C)"]
["AT5G43670","brown","Sec23/Sec24 protein transport family protein;(source:Araport11)","(ATSEC23G)","(ATSEC23G)"]
["AT5G04320","brown","Encodes a protein that protects meiotic centromere cohesion.","SHUGOSHIN 2 (SGO2)","(ATSGO2);SHUGOSHIN 2 (SGO2)"]
["AT1G10930","brown","DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination.","(RECQ4A)","(ATSGS1); (ATRECQ4A); (RECQ4A)"]
["AT1G11870","brown","Seryl-tRNA synthetase targeted to chloroplasts and mitochondria. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.","SERYL-TRNA SYNTHETASE (SRS)","(ATSRS);SERYL-TRNA SYNTHETASE (SRS)"]
["AT5G42920","brown","Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.","(THO5)","(AtTHO5); (THO5)"]
["AT1G18320","brown","Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein. Reportedly not expressed in Col-0.","(ATTIM22)","(ATTIM22); (ATTIM22-1)"]
["AT3G62980","brown","Encodes an auxin receptor that mediates auxin-regulated transcription. It contains leucine-rich repeats and an F-box and interacts with ASK1, ASK2 and AtCUL1 to form SCF-TIR1, an SCF ubiquitin ligase complex. Related to yeast Grr1p and human SKP2 proteins, involved in ubiquitin-mediated processes. Required for normal response to auxin and repressed in response to flagellin. As part of the SCF complex and in the presence of auxin, TIR1 interacts with Aux/IAA transcriptional repressor proteins and mediates their degradation. Mutations in TIR1 block auxin stimulation of flavonoid synthesis.","TRANSPORT INHIBITOR RESPONSE 1 (TIR1)","(AtTIR1);TRANSPORT INHIBITOR RESPONSE 1 (TIR1)"]
["AT1G76030","brown","One of three genes encoding the vacuolar ATP synthase subunit B1. This subunit was shown to interact with the gene product of hexokinase1 (ATHXK1). This interaction, however, is solely restricted to the nucleus. The protein binds to and co-localizes with F-actin, bundles F-actin to form higher-order structure, and stabilizes actin filaments in vitro. The mRNA is cell-to-cell mobile.","V-ATPASE B SUBUNIT 1 (VAB1)","(ATVAB1);V-ATPASE B SUBUNIT 1 (VAB1)"]
["AT5G21920","brown","One of four Arabidopsis homologs of bacterial ymlg proteins.","(YLMG2)","(ATYLMG2); (YLMG2)"]
["AT5G20990","brown","Involved in molybdenum cofactor (Moco) biosynthesis, inserting Mo into Molybdopterin. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.","(B73)","(B73);CO-FACTOR FOR NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 1 (CNX1);CO-FACTOR FOR NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE (CNX);CHLORATE RESISTANT 6 (CHL6);SIRTINOL 4 (SIR4)"]
["AT3G54050","brown","Encodes a chloroplastic fructose 1,6-bisphosphate phosphatase. also known as HCEF1 (High Cyclic Electron Flow 1). hcef1 mutants have constitutively elevated electron flow (CEFI) and plants with antisense suppression of this enzyme have higher levels of net leaf photosynthesis and increased sucrose biosynthesis. The mRNA is cell-to-cell mobile.","HIGH CYCLIC ELECTRON FLOW 1 (HCEF1)","(CFBP1);HIGH CYCLIC ELECTRON FLOW 1 (HCEF1)"]
["AT5G37510","brown","Encodes a subunit of the 400 kDa subcomplex of the mitochondrial NADH dehydrogenase (complex I). The protein has been isolated in the male gametophyte. The mRNA is cell-to-cell mobile.","EMBRYO DEFECTIVE 1467 (EMB1467)","(CI76);EMBRYO DEFECTIVE 1467 (EMB1467)"]
["AT2G03390","brown","One of the two adaptors (together with CLPS1) that are part of the plastid CLP system. Interacts with chloroplast chaperone CLPC1, which unfolds and delivers substrates to the stromal CLPPRT protease complex for degradation.","(CLPF)","(CLPF)"]
["AT2G35410","brown","Chloroplast stroma localized RNA binding protein that displays a preference for PSBA RNA.","(CP33B)","(CP33B)"]
["AT4G09040","brown","Encodes a protein that binds to the chloroplast psbA RNA. Has little effect on chloroplast gene expression under laboratory growth conditions.","(CP33C)","(CP33C)"]
["AT1G55490","brown","encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. The protein has molecular chaperone activity for suppressing protein aggregation in vitro.","CHAPERONIN 60 BETA (CPN60B)","(CPNB1);CHAPERONIN 60 BETA (CPN60B);CHAPERONIN-60BETA1 (CPN60BETA1);LESION INITIATION 1 (LEN1)"]
["AT5G11480","brown","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","(ENGB-2)","(ENGB-2)"]
["AT1G56050","brown","GTP-binding protein-like protein;(source:Araport11)","(ENGD-2)","(ENGD-2)"]
["AT5G66470","brown","GTP-binding protein Era-like protein;(source:Araport11)","(ERA-1)","(ERA-1);ERA (E. COLI RAS-LIKE PROTEIN)-RELATED GTPASE 1 (ERA1);ERA (E. COLI RAS-LIKE PROTEIN)-RELATED GTPASE 1 (ATERG1)"]
["AT3G11210","brown","SGNH hydrolase-type esterase superfamily protein;(source:Araport11)","(GGL17)","(GGL17)"]
["AT5G62930","brown","Guard-cell-enriched GDSL Lipase family member.","(GGL29)","(GGL29)"]
["AT1G11860","brown","T-protein is the aminomethyltransferase of the glycine cleavage multienzyme system GCS.","(GLDT)","(GLDT)"]
["AT3G10850","brown","glyoxalase II cytoplasmic isozyme (Glx2-2) mRNA, complete; ammonium-fed fro1, cytosolic GLXII.2 was significantly upregulated","(GLY2)","(GLY2);GLYOXALASE 2-2 (GLX2-2); (GLXII.2)"]
["AT5G57960","brown","GTP-binding protein, HflX;(source:Araport11)","(HFLX)","(HFLX)"]
["AT5G55220","brown","Contains with HP22 a protein that is related to the bacterial trigger factor chaperone. Plants depleted of either HP22 or HP65b or even both were increasingly delayed in leaf senescence and retained much longer stromal chloroplast constituents than wild-type plants.","(TIG1)","(HP65B); (TIG1)"]
["AT3G49140","brown","HugZ domain containing protein which is part of the main network with the CLPPRT complex.","(HUGZ-2)","(HUGZ-2)"]
["AT5G58100","brown","Encodes a membrane protein involved in pollen nexine and sexine development.","(IEF)","(IEF)"]
["AT3G08960","brown","Ran effector.KA120 is essential to avoid autoimmune activation in the absence of pathogens and is required to constrain the nuclear activity of SNC1, possibly through coordinating SNC1 nucleocytoplasmic homeostasis (PMID:34153500).","(KA120)","(KA120)"]
["AT4G38280","brown","Member of the DREAM complex, which represses growth in response to DNA damage, LIN52 type.","(LIN52B)","(LIN52B)"]
["AT3G52200","brown","Encodes a dihydrolipoamide S-acetyltransferase, a subunit of the mitochondrial pyruvate dehydrogenase complex.","(LTA3)","(LTA3);MITOCHONDRIAL PYRUVATE DEHYDROGENASE SUBUNIT 2-1 (MTE2-1)"]
["AT1G73480","brown","alpha/beta-Hydrolases superfamily protein;(source:Araport11)","(MAGL4)","(MAGL4)"]
["AT5G57170","brown","Chemokine-like MDL protein; modulates flowering time and innate immunity.","MIF/D-DT-LIKE 1 (AT5G57170)","(MDL1);MIF/D-DT-LIKE 1 (AT5G57170)"]
["AT1G48950","brown","Zinc finger protein involved in siRNA biogenesis or stability; may promote biogenesis and/or accumulation of GFP 21-nt siRNAs.","(MEM1)","(MEM1);ZINC FINGER C3HC-TYPE CONTAINING 1 (ZC2HC1);ZINC FINGER PROTEIN CONTAINING A ZF-C3HC DOMAIN (ZC3HC1)"]
["AT3G02090","brown","Mitochondrial-processing peptidase subunit beta.Component of mitochondrial import complex.","(MPPBETA)","(MPPBETA)"]
["AT5G26340","brown","Encodes a protein with high affinity, hexose-specific/H+ symporter activity. The activity of the transporter appears to be negatively regulated by phosphorylation. Importantly, microarray analysis, as well as the study of the expression of this gene in mutants involved in programmed cell death (PCD) demonstrated a tight correlation between this gene's expression and PCD.","(MSS1)","(MSS1);SUGAR TRANSPORT PROTEIN 13 (ATSTP13);SUGAR TRANSPORT PROTEIN 13 (STP13)"]
["AT5G55580","brown","Encodes a mitochondrial transcription termination factor (mTERF) family protein. The gene product is targeted to the chloroplast nucleoid and mutants are affected in plastid gene expression and chloroplast development. Mutants, named as twirt1 (twr-1), display altered root meristem function resulting in short roots. Mutation also affects shoot meristem function.","(MTERF9)","(MTERF9)"]
["AT5G08520","brown","Duplicated homeodomain-like superfamily protein;(source:Araport11)","(MYBS2)","(MYBS2)"]
["AT2G16780","brown","Encodes a WD-40 repeat protein similar to yeast MSI1.","MULTICOPY SUPPRESSOR OF IRA1 2 (MSI2)","(NFC02);NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 2 (NFC2); (MSI02)"]
["AT1G06560","brown","NOL1/NOP2/sun family protein;(source:Araport11)","(NOP2C)","(NOP2C);TRNA METHYLTRANSFERASE 4F (TRM4F); (ATTRM4F)"]
["AT5G66910","brown","RPW8 -CNL gene is required for signal transduction of TNLs; functionally redundant to NRG1.1.","N REQUIREMENT GENE 1.2 (NRG1.2)","(NRG1B);N REQUIREMENT GENE 1.2 (NRG1.2)"]
["AT3G14120","brown","nuclear pore complex protein;(source:Araport11)","(NUP107)","(NUP107)"]
["AT1G24310","brown","nuclear pore complex protein;(source:Araport11)","(NUP54)","(NUP54)"]
["AT5G18570","brown","Encodes AtObgC, a plant ortholog of bacterial Obg. AtObgC is a chloroplast-targeting GTPase essential for early embryogenesis. Mutations in this locus result in embryo lethality. The protein is dually localized in the stroma and the inner envelope membrane and is involved in thylakoid membrane biogenesis and functions primarily in plastid ribosome biogenesis during chloroplast development.","EMBRYO DEFECTIVE 269 (EMB269)","(OBGC);EMBRYO DEFECTIVE 269 (EMB269); (ATOBGC);CHLOROPLASTIC SAR1 (CPSAR1);EMBRYO DEFECTIVE 3138 (EMB3138);OBG-LIKE PROTEIN (ATOBGL); (OBG A-2); (OBGL)"]
["AT5G40660","brown","Encodes an F-type ATP Synthase Assembly factor that binds to beta subunits of mitochondrial ATPase.","(P12)","(P12)"]
["AT1G50950","brown","protein disulfide-isomerase 5-like protein (DUF1692);(source:Araport11)","(PDI13)","(PDI13)"]
["AT5G13090","brown","Reactive oxygen species (ROS) scavenger; differentially expressed in ovules of salt stressed plants; T-DNA mutants have 140% increase in seed failure.","(PER17)","(PER17)"]
["AT4G40080","brown","ENTH/ANTH/VHS superfamily protein;(source:Araport11)","(PICALM10A)","(PICALM10A)"]
["AT3G05410","brown","member of the thylakoid lumen proteome","(PPD7)","(PPD7)"]
["AT1G22700","brown","Encodes a TPR protein with homology to Ycf37 from Synechocystis that is localized to the thylakoid membrane and is involved in photosystem I biogenesis.","(PYG7)","(PYG7)"]
["AT3G06610","brown","Similar to Huntingtin Yeast Partner K.Interacts with the NatA complex component NAA15. Involved regulation of heat-stress-induced protein ubiquitination.","(PYK)","(PYK); (SUF1)"]
["AT3G06640","brown","PAS domain-containing protein tyrosine kinase family protein;(source:Araport11)","(RAF9)","(RAF9)"]
["AT1G70200","brown","Encodes a RNA-Binding Protein RBD1. Promotes chilling tolerance through 23S rRNA processing.","(RBD1)","(RBD1);HIGH PHOTOSYNTHETIC EFFICIENCY 1 (HPE1)"]
["AT5G26742","brown","DEAD box RNA helicase (RH3);(source:Araport11)","EMBRYO DEFECTIVE 1138 (emb1138)","(RH3); (ATRH3);EMBRYO DEFECTIVE 1138 (emb1138)"]
["AT1G78910","brown","Enzyme for the pseudouridine (&#936;) to uridine (U) conversion. FCS1-mediated pseudouridylation of mitochondrial 26S rRNA is required for mitochondrial translation, which is critical for maintaining mitochondrial function and plant development.","(RLUA1)","(RLUA1); (FCS1)"]
["AT4G37920","brown","Thylakoid localized protein involved in plastid RNA processing/chloroplast biogenesis; essential for chloroplast development and biogenesis.","(RP8)","(RP8);CHLOROPLAST DEVELOPMENT AND BIOGENESIS1 (CDB1)"]
["AT4G13170","brown","Ribosome protein; affects root system architecture through shoot potassium accumulation.","RIBOSOMAL PROTEIN UL13X (UL13X)","(RPL13AC);RIBOSOMAL PROTEIN UL13X (UL13X)"]
["ATCG00180","brown","RNA polymerase beta' subunit-1","(RPOC1)","(RPOC1)"]
["AT5G22070","brown","Putative glycosyltransferase that negatively regulates leaf senescence in a SID2 dependent manner.","(RSE1)","(RSE1)"]
["AT3G28460","brown","Chloroplast rRNA m2G methyltransferase.","(RSMD)","(RSMD)"]
["AT1G71410","brown","One of two paralogs in Arabidopsis.SCYL2B is a membrane localized protein that interacts with components of clathrin-mediated vesicle trafficking pathways. Loss of both SCYL2B and .SCYL2A results in severe growth defects.","(SCYL2B)","(SCYL2B)"]
["AT1G12360","brown","encodes a Sec1 protein and expressed throughout the plant. physically interacts with Syntaxin1 and is required for cytokinesis.","KEULE (KEU)","(SEC11);KEULE (KEU)"]
["AT4G38490","brown","transmembrane protein;(source:Araport11)","(SECE2)","(SECE2)"]
["AT4G23570","brown","Closely related to SGT1B, may function in SCF(TIR1) mediated protein degradation. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance. AtSGT1a is induced upon pathogen infection and can function in R gene-mediated resistance.","(SGT1A)","(SGT1A)"]
["AT5G13730","brown","Encodes sigma 4 factor, involved in regulating the activity of the plastid-encoded RNA polymerase PEP. Regulates the overall quantity of NDH complexes and thus influences NDH activity.","SIGMA FACTOR 4 (SIG4)","(SIGD);SIGMA FACTOR 4 (SIG4)"]
["AT1G69220","brown","Encodes serine/threonine kinase 1 (SIK1), a Hippo homolog. Regulates cell proliferation and cell expansion.","(SIK1)","(SIK1)"]
["AT1G07140","brown","Encodes a putative Ran-binding protein (siRanBP).","(SIRANBP)","(SIRANBP)"]
["AT5G48600","brown","member of SMC subfamily","STRUCTURAL MAINTENANCE OF CHROMOSOME 3 (SMC3)","(SMC4);STRUCTURAL MAINTENANCE OF CHROMOSOME 3 (SMC3)"]
["AT3G20898","brown","SIAMESE-RELATED (SMR) family gene; activated by SMOS1/SCL28 heterodimer thus inhibiting cell cycle progression at G2 and promoting the onset of endoreplication.","(SMR13)","(SMR13)"]
["AT5G24150","brown","squalene monooxygenase gene homolog","(SQP1)","(SQP1);SQUALENE MONOOXYGENASE 5 (SQE5)"]
["AT5G32470","brown","The classical thiamin-requiring th2-1 mutation corresponds to At5g32470, encoding a HAD (haloacid dehalogenase) family phosphatase fused to a TenA (thiamin salvage) family protein. The HAD domain is a thiamin monophosphate-selective phosphatase, and the TenA domain has the expected thiamin salvage activity.","THIAMINE REQUIRING 2 (TH2)","(TH-2);PALE GREEN 1 (PALE1);THIAMINE REQUIRING 2 (TH2)"]
["AT1G12930","brown","Ran effector.","(TNPO3)","(TNPO3)"]
["AT5G11040","brown","Encodes a tethering factor required for cell plate biogenesis.","(TRS120)","(TRS120); (AtTRS120);VASCULAR NETWORK DEFECTIVE 4 (VAN4); (TRAPPC9)"]
["AT1G20370","brown","Enzyme for the pseudouridine (&#936;) to uridine (U) conversion.","(TRUA1A)","(TRUA1A)"]
["AT3G06950","brown","Enzyme for the pseudouridine (&#936;) to uridine (U) conversion.","(TRUA4)","(TRUA4)"]
["AT1G09800","brown","Enzyme for the pseudouridine (&#936;) to uridine (U) conversion.","(TRUA6)","(TRUA6)"]
["AT1G22400","brown","UDP-Glycosyltransferase superfamily protein;(source:Araport11)","(UGT85A1)","(UGT85A1);ARABIDOPSIS THALIANA UDP-GLUCOSYL TRANSFERASE 85A1 (ATUGT85A1)"]
["AT3G20230","brown","Member of the uL18 RNA-binding protein family. uL18 proteins share a short structurally conserved domain that binds the 5S rRNA and allow its incorporation into ribosomes.","(UL18-L4)","(UL18-L4)"]
["AT3G42050","brown","Member of V-ATPase family. Vacuolar-type H + -ATPase (V-ATPase) is a multisubunit proton pump located on the endomembranes.","(VHA-H)","(VHA-H)"]
["AT1G59600","brown","ZCW7;(source:Araport11)","(ZCW7)","(ZCW7)"]
["AT4G00231","brown","ARM repeat superfamily protein;(source:Araport11)","MATERNAL EFFECT EMBRYO ARREST 50 (MEE50)","(ZIX);MATERNAL EFFECT EMBRYO ARREST 50 (MEE50)"]
["AT3G04340","brown","Functions in maintaining the cellular redox balance and regulates photorespiratory metabolism.Strong interaction with TIC inner envelope protein translocon which consists of Tic20/Tic56/Tic100/Tic214(Ycf1)(DOI:10.1105/tpc.18.00357).","EMBRYO DEFECTIVE 2458 (emb2458)","(FILAMENTATION TEMPERATURE-SENSITIVE H)-LIKE 5 (FTSHI5);EMBRYO DEFECTIVE 2458 (emb2458);THERMO-SENSITIVE MUTANT IN LEAF COLOR 2 (TSL2)"]
["AT1G50480","brown","10-formyltetrahydrofolate synthetase (THFS) mRNA, complete The mRNA is cell-to-cell mobile.","10-FORMYLTETRAHYDROFOLATE SYNTHETASE (THFS)","10-FORMYLTETRAHYDROFOLATE SYNTHETASE (THFS)"]
["AT2G38220","brown","RING/U-box superfamily protein;(source:Araport11)","ABERRANT POLLEN DEVELOPMENT 3 (APD3)","ABERRANT POLLEN DEVELOPMENT 3 (APD3)"]
["AT5G20520","brown","Encodes a de-S-acylation enzyme which specifically reduces protein S-acylation levels of five immunity-related proteins. WAV2 negatively regulates root bending when roots alter their growth direction. It's not involved in sensing environmental stimuli (e.g. gravity, light, water, touch).","WAVY GROWTH 2 (WAV2)","ABHD17 (ALPHA/BETA HYDROLASE DOMAIN-CONTAINING PROTEIN 17)-LIKE ACYL PROTEIN THIOESTERASE 11 (ABAPT11);WAVY GROWTH 2 (WAV2)"]
["AT2G34690","brown","Gene product transports the glycolipid precursor sphingosine between membranes in vitro. Mutant constitutively expresses defense-related genes that accompany the hypersensitive response normally triggered by avirulent pathogens. The mRNA is cell-to-cell mobile.","ACCELERATED CELL DEATH 11 (ACD11)","ACCELERATED CELL DEATH 11 (ACD11)"]
["AT5G24020","brown","Encodes a Ca2+ dependent ATPase required for correct positioning of the chloroplast division apparatus. Its ATPase activity is stimulated by AtMinE1, a topological specificity factor.","(MIND)","ACCUMULATION AND REPLICATION OF CHLOROPLASTS 11 (ARC11); (MIND); (ATMIND1)"]
["AT5G36880","brown","Encodes a plastidic acetyl-coA synthetase. This enzyme plays a role in converting acetate to acetyl-coA in the plastids. It does not appear to be a major contributor to fatty acid biosynthesis based on mutant phenotypes. The enzyme seems to act as a monomer and may play an important role in preventing the toxic accumulation of fermentation products including acetaldehyde, acetate, and ethanol. It participates in the pyruvate dehydrogenase bypass pathway","ACETYL-COA SYNTHETASE (ACS)","ACETYL-COA SYNTHETASE (ACS)"]
["AT3G18780","brown","Encodes an actin that is constitutively expressed in vegetative structures but not pollen. ACT2 is involved in tip growth of root hairs.","ACTIN 2 (ACT2)","ACTIN 2 (ACT2);DEFORMED ROOT HAIRS 1 (DER1);LIGHT STRESS-REGULATED 2 (LSR2);ENHANCER OF LRX1 2 (ENL2)"]
["AT1G11390","brown","Atypical kinase which functions in plant salt stress tolerance by regulating reactive oxygen species (ROS).","ACTIVITY OF BC1 COMPLEX KINASE 10A (ABC1K10A)","ACTIVITY OF BC1 COMPLEX KINASE 10A (ABC1K10A)"]
["AT1G30520","brown","Encodes a chloroplast O-succinylbenzoyl-CoA ligase. Involved in phylloquinone biosynthesis. Knock mutant is seedling lethal.","ACYL-ACTIVATING ENZYME 14 (AAE14)","ACYL-ACTIVATING ENZYME 14 (AAE14)"]
["AT3G51840","brown","Encodes a short-chain acyl-CoA oxidase, which catalyzes the first step of peroxisomal fatty acid beta-oxidation during early, post-germinative growth in oilseed species. Null mutants virtually lack short-chain acyl-CoA and are resistant to 2,4-dichlorophenoxybutyric acid, which is converted to the herbicide and auxin analogue 2,4-dichlorophenoxyacetic acid by beta-oxidation. Despite the almost complete loss of short-chain activity, lipid catabolism and seedling growth and establishment was unaltered in the acx4 mutant. However, double mutants in acx3acx4 (acx3 encodes medium chain acyl CoA oxidase) were not viable and arrested during embryogenesis.","ACYL-COA OXIDASE 4 (ACX4)","ACYL-COA OXIDASE 4 (ACX4); (ATSCX); (ATG6)"]
["AT4G01100","brown","Adenine nucleotide transporter. Located in mitochondrion. Expressed in a broad range of tissues, but predominantly in root tips. Loss of function mutants exhibit reduced root growth and respiration.","ADENINE NUCLEOTIDE TRANSPORTER 1 (ADNT1)","ADENINE NUCLEOTIDE TRANSPORTER 1 (ADNT1)"]
["AT3G49870","brown","A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.","ADP-RIBOSYLATION FACTOR-LIKE A1C (ARLA1C)","ADP-RIBOSYLATION FACTOR-LIKE A1C (ATARLA1C);ADP-RIBOSYLATION FACTOR-LIKE 8A (ARL8A);ADP-RIBOSYLATION FACTOR-LIKE A1C (ARLA1C)"]
["AT5G26880","brown","Root Specific","AGAMOUS-LIKE 26 (AGL26)","AGAMOUS-LIKE 26 (AGL26)"]
["AT4G21060","brown","Encodes an endomembrane system-localized, hydroxyproline-O-galactosyltransferase specific for arabinogalactan-protein biosynthesis.","AGP GALACTOSYLTRANSFERASE 2 (GALT2)","AGP GALACTOSYLTRANSFERASE 2 (GALT2); (ATGALT2)"]
["AT3G62910","brown","Encodes a plastid-localized ribosome release factor 1 that is essential in chloroplast development. Pale green, albino mutant seedlings arrest early in seedling development.","ALBINO AND PALE GREEN (APG3)","ALBINO AND PALE GREEN (APG3);ARABIDOPSIS THALIANA CHLOROPLAST RF1 (ATCPRF1);CHLOROPLAST RIBOSOME RELEASE FACTOR 1 (CPRF1); (DIG8)"]
["AT3G53700","brown","Nuclear encoded chloroplast PRR protein involved in plastid mRNA processing.","MATERNAL EFFECT EMBRYO ARREST 40 (MEE40)","ALBINO EMBRYO AND SEEDLING (AES);MATERNAL EFFECT EMBRYO ARREST 40 (MEE40)"]
["AT4G01800","brown","Encodes the ATPase subunit of the chloroplast Sec translocation machinery which plays an essential role in chloroplast biogenesis and the regulation of photosynthesis, the absence of which triggers a retrograde signal, eventually leading to a reprogramming of chloroplast and mitochondrial gene expression.","ALBINO OR GLASSY YELLOW 1 (AGY1)","ALBINO OR GLASSY YELLOW 1 (AGY1); (SECA1)"]
["AT3G48000","brown","Encodes a putative (NAD+) aldehyde dehydrogenase.","ALDEHYDE DEHYDROGENASE 2B4 (ALDH2B4)","ALDEHYDE DEHYDROGENASE 2B4 (ALDH2B4);ALDEHYDE DEHYDROGENASE 2 (ALDH2);ALDEHYDE DEHYDROGENASE 2A (ALDH2A)"]
["AT4G36250","brown","Encodes a putative aldehyde dehydrogenase. The gene is not responsive to osmotic stress and is expressed constitutively at a low level in plantlets and root cultures.","ALDEHYDE DEHYDROGENASE 3F1 (ALDH3F1)","ALDEHYDE DEHYDROGENASE 3F1 (ALDH3F1)"]
["AT5G22510","brown","Encodes a chloroplast-targeted alkaline/neutral invertase that is implicated in the development of the photosynthetic apparatus and nitrogen assimilation in seedlings to control the sucrose to hexose ratio.","ALKALINE/NEUTRAL INVERTASE E (INV-E)","ALKALINE/NEUTRAL INVERTASE E (A/N-InvE);ARABIDOPSIS ALKALINE/NEUTRAL INVERTASE E (At-A/N-InvE);ALKALINE/NEUTRAL INVERTASE E (INV-E)"]
["AT2G21390","brown","Coatomer subunit alpha-2. Part of endomembrane trafficking system. Interacts with SINAT1.","ALPHA2-COP (A2-COP)","ALPHA2-COP (A2-COP)"]
["AT1G51590","brown","Encodes an alpha-mannosidase I enzyme responsible for N-glycan maturation.","ALPHA-MANNOSIDASE 1 (MNS1)","ALPHA-MANNOSIDASE 1 (MNS1);ALPHA-MANNOSIDASE IB (MANIB)"]
["AT1G68560","brown","Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.","ALPHA-XYLOSIDASE 1 (XYL1)","ALPHA-XYLOSIDASE 1 (ATXYL1);ALPHA-XYLOSIDASE 1 (XYL1);THERMOINHIBITION RESISTANT GERMINATION 1 (TRG1); (TRG1);ALTERED XYLOGLUCAN 3 (AXY3); (GH31)"]
["AT5G46760","brown","MYC3 is a JAZ-interacting transcription factor that act together with MYC2 and MYC4 to activate JA-responses. The mRNA is cell-to-cell mobile.","(MYC3)","ALTERED TRYPTOPHAN REGULATION 2 (ATR2); (MYC3)"]
["AT1G78770","brown","anaphase promoting complex 6;(source:Araport11)","ANAPHASE PROMOTING COMPLEX 6 (APC6)","ANAPHASE PROMOTING COMPLEX 6 (APC6)"]
["AT2G17390","brown","Highly homologous to AKR2A. Involved in chloroplast biogenesis. Double mutants of AKR2A and AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes. The mRNA is cell-to-cell mobile.","ANKYRIN REPEAT-CONTAINING 2B (AKR2B)","ANKYRIN REPEAT-CONTAINING 2B (AKR2B)"]
["AT1G17210","brown","IAP-like protein 1;(source:Araport11)","IAP-LIKE PROTEIN 1 (ILP1)","ARABIDOPSIS IAP-LIKE PROTEIN (ATILP1);IAP-LIKE PROTEIN 1 (ILP1)"]
["AT4G34110","brown","Putative poly-A binding protein. Member of a gene family .Expressed in stele and root meristem and post-fertilization ovules.Member of the class II family of PABP proteins. The mRNA is cell-to-cell mobile.","POLY(A) BINDING PROTEIN 2 (PAB2)","ARABIDOPSIS POLY(A) BINDING 2 (ATPAB2);POLY(A) BINDING PROTEIN 2 (PABP2);POLY(A) BINDING PROTEIN 2 (PAB2)"]
["AT5G47610","brown","RING/U-box superfamily protein;(source:Araport11)","ARABIDOPSIS T??XICOS EN LEVADURA 79 (ATL79)","ARABIDOPSIS T??XICOS EN LEVADURA 79 (ATL79)"]
["AT4G25500","brown","Encodes an arginine/serine-rich splicing factor. The transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RS40 binds to HYL1 and co-localizes to the nuclear dicing body. Along with RS41, it appears to be involved in pri-miRNA processing and miRNA biogenesis (DOI:10.1093/nar/gkv751).","ARGININE/SERINE-RICH SPLICING FACTOR 40 (RS40)","ARABIDOPSIS THALIANA ARGININE/SERINE-RICH SPLICING FACTOR 35 (ATRSP35); (ATRSP40); (AT-SRP40);ARGININE/SERINE-RICH SPLICING FACTOR 35 (RSP35);ARGININE/SERINE-RICH SPLICING FACTOR 40 (RS40);ARGININE/SERINE-RICH SPLICING FACTOR 40 (At-RS40)"]
["AT3G48690","brown","Encodes a protein with carboxylesterase whose activity was tested using both pNA and 2,4-D-methyl.","(CXE12)","ARABIDOPSIS THALIANA CARBOXYESTERASE 12 (AtCXE12); (CXE12)"]
["AT3G01370","brown","Encodes a protein containing a CRM domain that is involved in group I and group II intron splicing.","CRM FAMILY MEMBER 2 (CFM2)","ARABIDOPSIS THALIANA CRM FAMILY MEMBER 2 (ATCFM2);CRM FAMILY MEMBER 2 (CFM2)"]
["AT5G06000","brown","One of the 2 genes that code for the G subunit of eukaryotic initiation factor 3 (EIF3).","EUKARYOTIC TRANSLATION INITIATION FACTOR 3G2 (EIF3G2)","ARABIDOPSIS THALIANA EUKARYOTIC TRANSLATION INITIATION FACTOR 3G2 (ATEIF3G2);EUKARYOTIC TRANSLATION INITIATION FACTOR 3G2 (EIF3G2)"]
["AT3G59410","brown","Encodes an eIF2alpha kinase that can bind uncharged tRNA via its C-terminus and can phosphorylate both eIF2alpha homologues in Arabidopsis.","GENERAL CONTROL NON-DEREPRESSIBLE 2 (GCN2)","ARABIDOPSIS THALIANA GENERAL CONTROL NON-DEREPRESSIBLE 2 (ATGCN2);GENERAL CONTROL NON-DEREPRESSIBLE 2 (GCN2); (GCN2)"]
["AT5G02500","brown","Encodes a member of heat shock protein 70 family. Hsc70-1 negatively regulates the expression of Hsp101 through HsfA1d, HsfA1e and HsfA2. During non-HS condition, Hsc70-1 attenuates the activity of HsfAs and finally affects the expression of HsfA2 and Hsp101 genes. hsc70-1 mutant showed thermotolerance phenotype due to higher expression of Hsp101 and other HS inducible genes.","HEAT SHOCK COGNATE PROTEIN 70-1 (HSC70-1)","ARABIDOPSIS THALIANA HEAT SHOCK COGNATE PROTEIN 70-1 (AT-HSC70-1);HEAT SHOCK PROTEIN 70-1 (HSP70-1); (AtHsp70-1);HEAT SHOCK COGNATE PROTEIN 70 (HSC70);HEAT SHOCK COGNATE PROTEIN 70-1 (HSC70-1)"]
["AT3G51910","brown","member of Heat Stress Transcription Factor (Hsf) family The mRNA is cell-to-cell mobile.","HEAT SHOCK TRANSCRIPTION FACTOR A7A (HSFA7A)","ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A7A (AT-HSFA7A);HEAT SHOCK TRANSCRIPTION FACTOR A7A (HSFA7A)"]
["AT1G23400","brown","Promotes the splicing of chloroplast group II introns.","CHLOROPLAST RNA SPLICING2-ASSOCIATED FACTOR 2 (CAF2)","ARABIDOPSIS THALIANA HOMOLOG OF MAIZE CAF2 (ATCAF2);CHLOROPLAST RNA SPLICING2-ASSOCIATED FACTOR 2 (CAF2)"]
["AT1G30400","brown","glutathione S-conjugate transporting ATPase (AtMRP1) mRNA. An ABCC-type arsenite-phytochelatin transporter. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.","ATP-BINDING CASSETTE C1 (ABCC1)","ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 1 (ATMRP1); (EST1);MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 1 (MRP1);ARABIDOPSIS THALIANA ATP-BINDING CASSETTE C1 (ATABCC1);ATP-BINDING CASSETTE C1 (ABCC1)"]
["AT5G57020","brown","Arabidopsis thaliana myristoyl-CoA:protein N-myristoyltransferase.","MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE (NMT1)","ARABIDOPSIS THALIANA MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE (ATNMT1);MYRISTOYL-COA:PROTEIN N-MYRISTOYLTRANSFERASE (NMT1)"]
["AT5G67330","brown","Encodes a member of the Nramp2 metal transporter family; like its homolog Atnramp3, localized in vacuolar membrane. Seedlings of double mutant, atnramp3-1 atnramp4-1, were arrested at early germination. The mRNA is cell-to-cell mobile.","NATURAL RESISTANCE ASSOCIATED MACROPHAGE PROTEIN 4 (NRAMP4)","ARABIDOPSIS THALIANA NATURAL RESISTANCE ASSOCIATED MACROPHAGE PROTEIN 4 (ATNRAMP4);NATURAL RESISTANCE ASSOCIATED MACROPHAGE PROTEIN 4 (NRAMP4)"]
["AT2G42070","brown","Encodes a plastid-localized Nudix hydrolase that has FAD pyrophosphohydrolase activity. Negative feedback regulation of the metabolism of flavins through the hydrolysis of FAD by AtNUDX23 in plastids is involved in the flavin homeostasis in plant cells.","NUDIX HYDROLASE HOMOLOG 23 (NUDX23)","ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 23 (atnudt23);NUDIX HYDROLASE HOMOLOG 23 (ATNUDX23);NUDIX HYDROLASE HOMOLOG 23 (NUDX23)"]
["AT4G27730","brown","oligopeptide transporter","OLIGOPEPTIDE TRANSPORTER 1 (OPT6)","ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 6 (ATOPT6);OLIGOPEPTIDE TRANSPORTER 1 (OPT6)"]
["AT5G06130","brown","Encodes an OR(orange)-like protein that interacts directly with the PSY (phytoene synthase) protein and acts as a positive posttranscriptional regulator of its expression, thereby affecting carotenoid biosynthesis.","ARABIDOPSIS THALIANA ORANGE-LIKE (ATOR-LIKE)","ARABIDOPSIS THALIANA ORANGE-LIKE (ATOR-LIKE)"]
["AT5G13640","brown","arabidopsis phospholipid:diacylglycerol acyltransferase (PDAT)","PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE (PDAT)","ARABIDOPSIS THALIANA PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE (ATPDAT);PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 1 (PDAT1);PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE (PDAT)"]
["AT2G38230","brown","Encodes a protein predicted to function in tandem with PDX2 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis. The mRNA is cell-to-cell mobile.","PYRIDOXINE BIOSYNTHESIS 1.1 (PDX1.1)","ARABIDOPSIS THALIANA PYRIDOXINE BIOSYNTHESIS 1.1 (ATPDX1.1);PYRIDOXINE BIOSYNTHESIS 1.1 (PDX1.1)"]
["AT5G54310","brown","A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. Regulates membrane trafficking and organ separation.","ARF-GAP DOMAIN 5 (AGD5)","ARF-GAP DOMAIN 5 (AGD5);NEVERSHED (NEV); (ATAGD5)"]
["AT2G18390","brown","Encodes a member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. Mutant has abnormal mitosis and cell cycle control during seed development.","TITAN 5 (TTN5)","ARF-LIKE 2 (ARL2); (ATARLC1);TITAN 5 (TTN5);HALLIMASCH (HAL)"]
["AT3G07420","brown","Encodes an asparaginyl-tRNA synthetase.","ASPARAGINYL-TRNA SYNTHETASE 2 (NS2)","ASPARAGINYL-TRNA SYNTHETASE 2 (NS2);ASPARAGINYL-TRNA SYNTHETASE 2 (ATNS2);ASPARAGINYL-TRNA SYNTHETASE 2 (SYNC2_ARATH);SYNTHETASE C2 (SYNC2)"]
["AT2G28070","brown","ABC-2 type transporter family protein;(source:Araport11)","ATP-BINDING CASSETTE G3 (ABCG3)","ATP-BINDING CASSETTE G3 (ABCG3)"]
["AT4G15236","brown","ABC-2 and Plant PDR ABC-type transporter family protein;(source:Araport11)","ATP-BINDING CASSETTE G43 (ABCG43)","ATP-BINDING CASSETTE G43 (ABCG43)"]
["AT2G01320","brown","ABC-2 type transporter family protein;(source:Araport11)","ATP-BINDING CASSETTE G7 (ABCG7)","ATP-BINDING CASSETTE G7 (ABCG7)"]
["AT2G41560","brown","Encodes a calmodulin-regulated Ca(2+)-ATPase that improves salt tolerance in yeast. Localized to the vacuole. Lesion mimic phenotype when mutation in the gene is combined with a mutation in ACA11. Lesion mimic phenotype of double knockout can be suppressed by nutritional supplements that increase anion levels (e.g. 15 mM Nitrate, Chloride, or Phosphate).ACA8 and ACA10, as well as ACA4 and ACA11, are critical in maintaining low resting cytosol Ca2+ level (DOI:10.1093/plphys/kiad047)","AUTOINHIBITED CA(2+)-ATPASE, ISOFORM 4 (ACA4)","AUTOINHIBITED CA(2+)-ATPASE, ISOFORM 4 (ACA4)"]
["AT5G49980","brown","Member of TIR1/AFB group of F-box proteins, functions as an auxin receptor, mediates response to synthetic auxin picloran.","AUXIN F-BOX PROTEIN 5 (AFB5)","AUXIN F-BOX PROTEIN 5 (AFB5)"]
["AT1G05180","brown","Encodes a subunit of the RUB1 activating enzyme that regulates the protein degradation activity of Skp1-Cullin-Fbox complexes, primarily, but not exclusively, affecting auxin responses. Acts alongside AS1 to exclude BP expression from leaves. Promotes degradation of the cytokinin response repressor ARR5. Affects expression of key DNA repair and meiotic genes, signifcant role in DNA repair.","AUXIN RESISTANT 1 (AXR1)","AUXIN RESISTANT 1 (AXR1)"]
["AT1G27190","brown","Activated by TCP8/14/15/22, involved in modulation of GA-dependent stamen filament elongation.","BAK1-INTERACTING RECEPTOR-LIKE KINASE 3 (BIR3)","BAK1-INTERACTING RECEPTOR-LIKE KINASE 3 (BIR3)"]
["AT5G36890","brown","beta glucosidase 42;(source:Araport11)","BETA GLUCOSIDASE 42 (BGLU42)","BETA GLUCOSIDASE 42 (BGLU42)"]
["AT4G30825","brown","P-class pentatricopeptide repeat (PPR) protein essential for accumulation of the dicistronic atpH/F transcript in chloroplasts. Acts as barrier to prevent the atpH/F transcript degradation by exoribonucleases by binding to the consensus sequence of the atpF-atpA intergenic region.","BIOGENESIS FACTOR REQUIRED FOR ATP SYNTHASE 2 (BFA2)","BIOGENESIS FACTOR REQUIRED FOR ATP SYNTHASE 2 (BFA2)"]
["AT2G41370","brown","Encodes BOP2, a cytoplasmic and nuclear-localized NPR1 like protein with BTB/POZ domain and ankyrin repeats. Interacts with BOP1 and appears to be genetically redundant with BOP1.bop1/bop2 double mutants have longer leaves, often with leaflets on the petiole, asymmetric flowers with extra organs and no nectaries. Also defective in floral organ abscission. BOP1/2 promotes floral meristem fate and determinacy in a pathway targetting APETALA1 and AGAMOUS-LIKE24. PUCHI, BOP1 and BOP2 are redundantly required for expression of LFY and AP1. BOP2 is expressed in valve margin. Misexpression in stems causes short internodes and ectopic biosynthesis of lignin. BOP2 activity is antagonistic to BP (At4g08150) and PNY (At5g02030). BOP3 expression is restricted to pedicel axils by BP and PNY; promotes KNAT6 (At1g23380) expression.","BLADE ON PETIOLE2 (BOP2)","BLADE ON PETIOLE2 (BOP2)"]
["AT2G39660","brown","Encodes a plasma membrane-localized ser/thr protein kinase that is a crucial component of host response signaling required to activate the resistance responses to Botrytis and A. brassicicola infection. It is likely a negative regulator of salicylic acid accumulation and basal defense against virulent bacterial pathogens. Together with ER plays opposing roles in leaf morphogenesis and inflorescence architecture. Required to maintain appropriate auxin response during leaf margin morphogenesis. Interacts with ER-family proteins and directly phosphorylates ER.","BOTRYTIS-INDUCED KINASE1 (BIK1)","BOTRYTIS-INDUCED KINASE1 (BIK1)"]
["AT3G57180","brown","Encodes a chloroplast localized protein YL1/BPG2. Involved in seedling shoot response to salt stress through ABI4.","BRASSINAZOLE(BRZ) INSENSITIVE PALE GREEN 2 (BPG2)","BRASSINAZOLE(BRZ) INSENSITIVE PALE GREEN 2 (BPG2);YELLOW LEAF 1 (YL1)"]
["AT5G42750","brown","Encodes a plasma-membrane associated phosphoprotein that interacts directly with the kinase domain of BRI1 through the evolutionarily conserved C-terminal BIM motif binding to the C-lobe of the BRI1 kinase domain. It interferes with the interaction between BRI1 with its signalling partner, the plasma membrane localised LRR-receptor kinase BAK1 by inhibiting the transphosphorylation to keep BRI1 at a basal level of activity. It is phosphorylated by BRI1 at Ser270 & Ser274 and at tyrosine site Tyr211 and dissociates from plasma membrane to end up in the cytosol after phosphorylation. Its loss-of-function mutant shows higher sensitivity to BR treatment.","BRI1 KINASE INHIBITOR 1 (BKI1)","BRI1 KINASE INHIBITOR 1 (BKI1)"]
["AT2G17990","brown","Calcium-dependent protein kinase 1 adaptor protein involved in vacuolar transport and lytic vacuole biogenesis.","CALCIUM-DEPENDENT PROTEIN KINASE 1 ADAPTOR PROTEIN 2 (AtCAP2)","CALCIUM-DEPENDENT PROTEIN KINASE 1 ADAPTOR PROTEIN 2 (AtCAP2)"]
["AT5G12480","brown","calmodulin-domain protein kinase CDPK isoform 7 (CPK7)","CALMODULIN-DOMAIN PROTEIN KINASE 7 (CPK7)","CALMODULIN-DOMAIN PROTEIN KINASE 7 (CPK7)"]
["AT1G08450","brown","Encodes one of three Arabidopsis calreticulins. In CRT-deficient mouse fibroblasts, this protein restores ER Ca2+ levels. Non-receptor component required for EFR-mediated immunity. Mutants show de-repressed anthocyanin accumulation in the presence of elf18, and EFR accumulation and signalling.","CALRETICULIN 3 (CRT3)","CALRETICULIN 3 (CRT3);EMS-MUTAGENIZED BRI1 SUPPRESSOR 2 (EBS2);PRIORITY IN SWEET LIFE 1 (PSL1)"]
["AT1G80000","brown","Biomolecular condensates of this gene restrict turnip crinkle virus by limiting host factor availability.","CASC3/BARENTSZ ELF4AIII-BINDING PROTEIN (BTZ1)","CASC3/BARENTSZ ELF4AIII-BINDING PROTEIN (BTZ1); (CASC3)"]
["AT3G50000","brown","Encodes the casein kinase II (CK2) catalytic subunit (alpha).","CASEIN KINASE II, ALPHA CHAIN 2 (CKA2)","CASEIN KINASE II, ALPHA CHAIN 2 (CKA2); (ATCKA2)"]
["AT3G18500","brown","Deadenylase.","CATABOLITE REPRESSOR 4C (CCR4C)","CATABOLITE REPRESSOR 4C (CCR4C)"]
["AT3G44900","brown","member of Putative Na+/H+ antiporter family","CATION/H+ EXCHANGER 4 (CHX4)","CATION/H+ EXCHANGER 4 (ATCHX4);CATION/H+ EXCHANGER 4 (CHX4)"]
["AT1G58030","brown","Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Localized to the tonoplast.","CATIONIC AMINO ACID TRANSPORTER 2 (CAT2)","CATIONIC AMINO ACID TRANSPORTER 2 (CAT2); (ATCAT2)"]
["AT1G65320","brown","Cystathionine beta-synthase (CBS) family protein;(source:Araport11)","CBS DOMAIN CONTAINING PROTEIN 6 (CBSX6)","CBS DOMAIN CONTAINING PROTEIN 6 (CBSX6)"]
["AT5G10960","brown","Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11)","CCR4-ASSOCIATED FACTOR 1I (CAF1I)","CCR4-ASSOCIATED FACTOR 1I (CAF1I)"]
["AT1G29790","brown","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)",null,"CELLULOSE SYNTHASE LIKE C5 (CLSC5)"]
["AT1G15660","brown","Encodes a homologue of the human centromeric protein C (CENP-C). CENP-C co-localizes with the 180 bp centromeric regions of chromosomes throughout the cell cycle, but does not completely cover the 180 bp regions.","CENTROMERE PROTEIN C (CENP-C)","CENTROMERE PROTEIN C (CENP-C);CENP-C HOMOLOGUE (CENP-C)"]
["AT5G20720","brown","Encodes a chloroplast co-chaperonin with similarity to CPN21 from spinach, E.coli GroES.","CHAPERONIN 20 (CPN20)","CHAPERONIN 20 (CPN20);CHLOROPLAST CHAPERONIN 10 (CPN10); (CPN21); (ATCPN21);CHLOROPLAST CHAPERONIN 10 (CHCPN10)"]
["AT5G20890","brown","TCP-1/cpn60 chaperonin family protein;(source:Araport11)","CHAPERONIN CONTAINING T-COMPLEX POLYPEPTIDE-1 SUBUNIT 2 (CCT2)","CHAPERONIN CONTAINING T-COMPLEX POLYPEPTIDE-1 SUBUNIT 2 (CCT2)"]
["AT3G18190","brown","TCP-1/cpn60 chaperonin family protein;(source:Araport11)","CHAPERONIN CONTAINING T-COMPLEX POLYPEPTIDE-1 SUBUNIT 4 (CCT4)","CHAPERONIN CONTAINING T-COMPLEX POLYPEPTIDE-1 SUBUNIT 4 (CCT4)"]
["AT1G24510","brown","TCP-1/cpn60 chaperonin family protein;(source:Araport11)","CHAPERONIN CONTAINING T-COMPLEX POLYPEPTIDE-1 SUBUNIT 5 (CCT5)","CHAPERONIN CONTAINING T-COMPLEX POLYPEPTIDE-1 SUBUNIT 5 (CCT5)"]
["AT5G16070","brown","TCP-1/cpn60 chaperonin family protein;(source:Araport11)","CHAPERONIN CONTAINING T-COMPLEX POLYPEPTIDE-1 SUBUNIT 6-1 (CCT6-1)","CHAPERONIN CONTAINING T-COMPLEX POLYPEPTIDE-1 SUBUNIT 6-1 (CCT6-1)"]
["AT3G02530","brown","TCP-1/cpn60 chaperonin family protein;(source:Araport11)","CHAPERONIN CONTAINING T-COMPLEX POLYPEPTIDE-1 SUBUNIT 6-2 (CCT6-2)","CHAPERONIN CONTAINING T-COMPLEX POLYPEPTIDE-1 SUBUNIT 6-2 (CCT6-2)"]
["AT3G11830","brown","TCP-1/cpn60 chaperonin family protein;(source:Araport11)","CHAPERONIN CONTAINING T-COMPLEX POLYPEPTIDE-1 SUBUNIT 7 (CCT7)","CHAPERONIN CONTAINING T-COMPLEX POLYPEPTIDE-1 SUBUNIT 7 (CCT7)"]
["AT3G13470","brown","Encodes a subunit of chloroplasts chaperonins that are involved in mediating the folding of newly synthesized, translocated, or stress-denatured proteins. Cpn60 subunits are: Cpn60alpha1 (At2g28000), AtCpn60alpha2 (At5g18820), AtCpn60beta1 (At1g55490), AtCpn60beta2 (At3g13470), AtCpn60beta3 (At5g56500), AtCpn60beta4 (At1g26230).","CHAPERONIN-60BETA2 (CPN60BETA2)","CHAPERONIN-60BETA2 (CPN60BETA2); (CPNB2)"]
["AT1G26230","brown","Encodes a subunit of chloroplasts chaperonins that are involved in mediating the folding of newly synthesized, translocated, or stress-denatured proteins. Cpn60 subunits are: Cpn60alpha1 (At2g28000), AtCpn60alpha2 (At5g18820), AtCpn60beta1 (At1g55490), AtCpn60beta2 (At3g13470), AtCpn60beta3 (At5g56500), AtCpn60beta4 (At1g26230).","CHAPERONIN-60BETA4 (CPN60BETA4)","CHAPERONIN-60BETA4 (CPN60BETA4); (CPNB4)"]
["AT4G35440","brown","Enclodes a choride channel protein that is localized to the thlakoid membrane.","CHLORIDE CHANNEL E (CLC-E)","CHLORIDE CHANNEL E (CLC-E)"]
["AT1G44446","brown","Encodes chlorophyllide <i>a</i> oxygenase which converts chlorophyllide <i>a</i> to chlorophyllide <i>b</i> by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide <i>a</i> . Mutants are deficient in pigments that associate with thylakoid membrane proteins, lacking chlorophyll <i>b</i> and light-harvesting proteins of photosystem II. The protein was shown through cross-linking experiments to interact with Toc75, Toc34, Tic40, Tic20 and Tic22.","CHLORINA 1 (CH1)","CHLORINA 1 (CH1);ARABIDOPSIS THALIANA CHLOROPHYLL A OXYGENASE (ATCAO);CHLOROPHYLL A OXYGENASE (CAO)"]
["AT2G28000","brown","Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development. The mRNA is cell-to-cell mobile.","CHAPERONIN-60ALPHA (CPN60A)","CHLOROPLAST CHAPERONIN 60ALPHA (CH-CPN60A);ACCUMULATION AND REPLICATION OF CHLOROPLASTS 2 (ARC2);CHAPERONIN-60ALPHA (CPN60A); (ARC2); (CPNA1);CHAPERONIN-60ALPHA1 (CPN60ALPHA1);SCHLEPPERLESS (SLP)"]
["AT5G17710","brown","Chloroplast GrpE protein involved in chloroplastic response to heat stress and the correct oligomerization of the photosynthesis-related LHCII complex.","EMBRYO DEFECTIVE 1241 (EMB1241)","CHLOROPLAST GRPE 1 (CGE1);EMBRYO DEFECTIVE 1241 (EMB1241)"]
["AT4G24280","brown","Involved in protein import into chloroplasts during early developmental stages. The mRNA is cell-to-cell mobile.","CHLOROPLAST HEAT SHOCK PROTEIN 70-1 (cpHsc70-1)","CHLOROPLAST HEAT SHOCK PROTEIN 70-1 (cpHsc70-1);HEAT SHOCK PROTEIN 70-6 (HSP70-6)"]
["AT2G37220","brown","Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","CHLOROPLAST RNA BINDING PROTEIN 29B (CP29B)","CHLOROPLAST RNA BINDING PROTEIN 29B (CP29B); (SEBF)"]
["AT5G42310","brown","Encodes a member of the Arabidopsis PPR family, expressed in the chloroplast, that acts as a regulator of chloroplast protein synthesis, interacts with the petB-petD intergenic region, and is required for the generation of petB and petD monocistronic RNAs.","CHLOROPLAST RNA PROCESSING 1 (CRP1)","CHLOROPLAST RNA PROCESSING 1 (CRP1)"]
["AT3G53460","brown","Encodes a nuclear gene with a consensus RNA-binding domain that is localized to the chloroplast.","CHLOROPLAST RNA-BINDING PROTEIN 29A (CP29A)","CHLOROPLAST RNA-BINDING PROTEIN 29A (CP29A)"]
["AT5G50250","brown","Encodes a RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Supports editing of specific CP31A-dependent sites.","CHLOROPLAST RNA-BINDING PROTEIN 31B (CP31B)","CHLOROPLAST RNA-BINDING PROTEIN 31B (CP31B)"]
["AT4G23890","brown","NAD(P)H-quinone oxidoreductase subunit S;(source:Araport11)","NADH DEHYDROGENASE-LIKE COMPLEX S (NdhS)","CHLORORESPIRATORY REDUCTION 31 (CRR31);CRR31 (CRR31);NADH DEHYDROGENASE-LIKE COMPLEX S (NdhS)"]
["AT2G47910","brown","Encodes a chloroplast thylakoid membrane protein. Required for the assembly/accumulation of the NAD(P)H dehydrogenase complex of the photosynthetic electron transport chain.","CHLORORESPIRATORY REDUCTION 6 (CRR6)","CHLORORESPIRATORY REDUCTION 6 (CRR6)"]
["AT1G59720","brown","Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.","CHLORORESPIRATORY REDUCTION28 (CRR28)","CHLORORESPIRATORY REDUCTION28 (CRR28)"]
["AT3G48560","brown","Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding.","CHLORSULFURON/IMIDAZOLINONE RESISTANT 1 (CSR1)","CHLORSULFURON/IMIDAZOLINONE RESISTANT 1 (CSR1);ACETOLACTATE SYNTHASE (ALS);ACETOHYDROXY ACID SYNTHASE (AHAS);TRIAZOLOPYRIMIDINE RESISTANT 5 (TZP5);IMIDAZOLE RESISTANT 1 (IMR1)"]
["AT3G08530","brown","CHC2 heavy chain subunit of clathrin. Involved in vesicle mediated trafficking. Mutants show reduced rates of endocytosis and defects clathrin mediated exocytosis Mutants have increased drought tolerance due to defects in stomatal movement.","CLATHRIN HEAVY CHAIN 2 (CHC2)","CLATHRIN HEAVY CHAIN 2 (CHC2); (ATCHC2)"]
["AT5G65480","brown","CCL1 is induced by WUS and binds to the kinase domains of BAM1 and CLV1. Localizes to lipid rich plasma membrane rafts. Likely to be involved in WUS/CLV signaling pathway.","CLAVATA COMPLEX INTERACTOR 1 (CCI1)","CLAVATA COMPLEX INTERACTOR 1 (CCI1)"]
["AT5G52110","brown","chaperone (DUF2930);(source:Araport11)","HIGH CHLOROPHYLL FLUORESCENCE 208 (HCF208)","COFACTOR ASSEMBLY OF COMPLEX C (CCB2);HIGH CHLOROPHYLL FLUORESCENCE 208 (HCF208)"]
["AT5G52310","brown","cold regulated gene, the 5' region of cor78 has cis-acting regulatory elements that can impart cold-regulated gene expression The mRNA is cell-to-cell mobile.","LOW-TEMPERATURE-INDUCED 78 (LTI78)","COLD REGULATED 78 (COR78);LOW-TEMPERATURE-INDUCED 78 (LTI78); (LTI140);RESPONSIVE TO DESICCATION 29A (RD29A)"]
["AT4G15890","brown","CAP-3D is a subunit of condensin. It a target of MMD1 regulation and also involved in meiotic chromosome condensation. Mutants have reduced fertility. Required for the correct spatial relationship between centromeres and rDNA arrays.","CONDENSIN (CAP-D3)","CONDENSIN (CAP-D3)"]
["AT4G24840","brown","oligomeric golgi complex subunit-like protein;(source:Araport11)","CONSERVED OLIGOMERIC GOLGI COMPLEX 2 (COG2)","CONSERVED OLIGOMERIC GOLGI COMPLEX 2 (COG2)"]
["AT2G17240","brown","Participates in the late stages of the biogenesis of 50S ribosomal subunits in plastids.","CONSERVED ONLY IN THE GREEN LINEAGE20 (CGL20A)","CONSERVED ONLY IN THE GREEN LINEAGE20 (CGL20A)"]
["AT2G20120","brown","Encodes an integral membrane protein of unknown function, highly conserved between plants and bacteria; is likely to be involved in a mechanism that negatively regulates the differentiation of vascular tissue in the stem. Mutants display a dramatic increase in vascular tissue development in the stem in place of the interfascicular region that normally separates the vascular bundles.","CONTINUOUS VASCULAR RING (COV1)","CONTINUOUS VASCULAR RING (COV1)"]
["AT5G50000","brown","Belongs to the Raf-like kinase subfamily of the mitogen-activated protein kinase kinase kinase (MAPKKK) family. Negatively regulates stomatal opening by negatively regulating plasma membrane H+-ATPase phosphorylation.","CONVERGENCE OF BLUE LIGHT AND CO2 2 (CBC2)","CONVERGENCE OF BLUE LIGHT AND CO2 2 (CBC2)"]
["AT1G22920","brown","AJH1 encodes a protein similar to JAB1, a specific mammalian coactivator of AP-1 transcription. Encodes a subunit of the COP9 complex that is involved in protein deneddylation. Plants with mutations in CSN5A and CSN5B have a de-etiolated phenotype. Required for the recovery of AUX/IAA repressor levels following recurrent heat stress to regulate auxin homeostasis.","COP9 SIGNALOSOME 5A (CSN5A)","COP9 SIGNALOSOME 5A (CSN5A); (JAB1);ARABIDOPSIS JAB1 HOMOLOG 1 (AJH1)"]
["AT2G39940","brown","Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation. Amino acid mutations in COI1 distinctively affect jasmonate-regulated male fertility.CFA-Ile, CFA-Leu, CFA-Val, CFA-Met and CFA-Ala could not inhibit the root length and restoration of fertility in coi1-1 mutants.","CORONATINE INSENSITIVE 1 (COI1)","CORONATINE INSENSITIVE 1 (COI1)"]
["AT4G39040","brown","RNA-binding CRS1 / YhbY (CRM) domain protein;(source:Araport11)","CRM FAMILY MEMBER SUBFAMILY 4 (CFM4)","CRM FAMILY MEMBER SUBFAMILY 4 (CFM4)"]
["AT4G24460","brown","Encodes one of the CRT-Like transporters (CLT1/AT5G19380, CLT2/AT4G24460, CLT3/AT5G12170). Required for glutathione homeostasis and stress responses. Mutants lacking these transporters are heavy metal-sensitive, glutathione(GSH)-deficient, and hypersensitive to Phytophthora infection.","CRT (CHLOROQUINE-RESISTANCE TRANSPORTER)-LIKE TRANSPORTER 2 (CLT2)","CRT (CHLOROQUINE-RESISTANCE TRANSPORTER)-LIKE TRANSPORTER 2 (CLT2)"]
["AT1G63980","brown","Interacts with CRY2.","CRY2 INTERACTING SPLICING FACTOR (CIS2)","CRY2 INTERACTING SPLICING FACTOR (CIS2)"]
["AT1G78830","brown","In combination with MYB4, MAN3, and Mannose part of signaling cascade which regulates cadmium tolerance. Mannose is able to bind to the GNA-related domain of MNB1; mannose binding to the GNA-related domain of MNB1 is required for MAN3-mediated Cd tolerance.Involved in Fe deficiency response via modulation of ROS accumulation.","(MNB1)","CURCULIN-LIKE LECTIN FAMILY PROTEIN (CCLP); (MNB1)"]
["AT2G22490","brown","encodes a D-type cyclin whose transcription level is regulated by sucrose but not phytohormones or nitrate. Protein physically interacts with CDC2A. CycD2 kinase activity is regulated by sequestration of CycD2 protein in a form inaccessible to immunoprecipitation and probably not complexed to CDC2A.","CYCLIN D2;1 (CYCD2;1)","CYCLIN D2;1 (CYCD2;1)"]
["AT3G57050","brown","Encodes cystathionine beta-lyase, the second enzyme in the methionine biosynthetic pathway. Mutants show defects in root development, reduced methylation and maintenance of the quiescent center.","CYSTATHIONINE BETA-LYASE (CBL)","CYSTATHIONINE BETA-LYASE (CBL)"]
["AT3G03630","brown","Encodes a protein that possesses S-sulfocysteine synthase activity and lacks O-acetylserien(thiol)lyase activity.","CYSTEINE SYNTHASE 26 (CS26)","CYSTEINE SYNTHASE 26 (CS26)"]
["AT4G23180","brown","Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) The mRNA is cell-to-cell mobile.","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 10 (CRK10)","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 10 (CRK10); (RLK4)"]
["AT2G24180","brown","Encodes a cytochrome P450 monooxygenase that converts indole-3-acetonitrile to indole-3-aldehyde / indole-3-carboxylic acid and cyanide. The mRNA is cell-to-cell mobile.","CYTOCHROME P450 71B6 (CYP71B6)","CYTOCHROME P450 71B6 (CYP71B6)"]
["AT3G20935","brown","cytochrome P450, family 705, subfamily A, polypeptide 28;(source:Araport11)","CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 28 (CYP705A28)","CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 28 (CYP705A28)"]
["AT3G25890","brown","encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. The mRNA is cell-to-cell mobile.","CYTOKININ RESPONSE FACTOR 11 (CRF11)","CYTOKININ RESPONSE FACTOR 11 (CRF11)"]
["AT4G23750","brown","encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Monopteros target gene. CRF proteins relocalize to the nucleus in response to cytokinin.","CYTOKININ RESPONSE FACTOR 2 (CRF2)","CYTOKININ RESPONSE FACTOR 2 (CRF2);TARGET OF MONOPTEROS 3 (TMO3)"]
["AT3G04620","brown","Target promoter of the male germline-specific transcription factor DUO1.","D NUCLDUO1-ACTIVATEEIC ACID BINDING PROTEIN 1 (DAN1)","D NUCLDUO1-ACTIVATEEIC ACID BINDING PROTEIN 1 (DAN1); (ALBA3)"]
["AT3G17090","brown","Protein phosphatase 2C family protein;(source:Araport11)","D-CLADE TYPE 2C PROTEIN PHOSPHATASE 2 (PP2C.D2)","D-CLADE TYPE 2C PROTEIN PHOSPHATASE 2 (PP2C.D2)"]
["AT5G45330","brown","decapping 5-like protein;(source:Araport11)","DECAPPING 5-LIKE (DCP5-L)","DECAPPING 5-LIKE (DCP5-L)"]
["AT1G14620","brown","decoy;(source:Araport11)","DECOY (DECOY)","DECOY (DECOY);RIBOSOMAL PROTEIN ML46 (ML46)"]
["AT4G33400","brown","Together with DEM2 plays an essential role in cell division in plants, most likely through an interaction with RAN1.","DEFECTIVE EMBRYO AND MERISTEMS 1 (DEM1)","DEFECTIVE EMBRYO AND MERISTEMS 1 (DEM1)"]
["AT3G03380","brown","Encodes a putative DegP protease. The mRNA is cell-to-cell mobile.","DEGRADATION OF PERIPLASMIC PROTEINS 7 (DEG7)","DEGP PROTEASE 7 (DegP7);DEGRADATION OF PERIPLASMIC PROTEINS 7 (DEG7)"]
["AT5G36950","brown","Encodes a putative DegP protease.","DEGRADATION OF PERIPLASMIC PROTEINS 10 (DEG10)","DEGRADATION OF PERIPLASMIC PROTEINS 10 (DEG10);DEGP PROTEASE 10 (DegP10)"]
["AT5G40200","brown","Encodes a putative DegP protease. The mRNA is cell-to-cell mobile.","DEGRADATION OF PERIPLASMIC PROTEINS 9 (DEG9)","DEGRADATION OF PERIPLASMIC PROTEINS 9 (DEG9);DEGP PROTEASE 9 (DegP9)"]
["AT3G12930","brown","Encodes a novel conserved chloroplast protein that interacts with components of the PEP complex. Mutants show delayed greening and reduced photosynthetic capcity.","DELAYED GREENING 238 (DG238)","DELAYED GREENING 238 (DG238)"]
["AT4G25640","brown","Encodes a multidrug and toxin efflux family transporter. Involved in flavonoid metabolism, affecting Root growth, seed development and germination, and pollen development, release and viability.","DETOXIFYING EFFLUX CARRIER 35 (DTX35)","DETOXIFYING EFFLUX CARRIER 35 (DTX35)"]
["AT1G17470","brown","Encodes a member of the DRG (developmentally regulated G-protein) family expressed throughout the plant, with highest expression in actively growing tissues. Has GTPase activity.","DEVELOPMENTALLY REGULATED G-PROTEIN 1 (DRG1)","DEVELOPMENTALLY REGULATED G-PROTEIN 1 (DRG1); (ATDRG);DEVELOPMENTALLY REGULATED G-PROTEIN 1 (ATDRG1); (DRG1-2)"]
["AT1G67180","brown","Encodes a plant-specific ubiquitin E3 ligase DDRM1 ubiquitinates and stabilizes SOG1 to promote homologous recombination repair.","SUMO-TARGETED UBIQUITIN E3 LIGASE 2 (STUBL2)","DNA DAMAGE RESPONSE MUTANT 1 (DDRM1);SUMO-TARGETED UBIQUITIN E3 LIGASE 2 (STUBL2)"]
["AT2G22360","brown","Essential for chloroplast iron?sulfur cluster biogenesis.","DNA J PROTEIN A6 (DJA6)","DNA J PROTEIN A6 (DJA6)"]
["AT5G18140","brown","Chaperone DnaJ-domain superfamily protein;(source:Araport11)","DNA J PROTEIN A69 (DJC69)","DNA J PROTEIN A69 (DJC69)"]
["AT2G47220","brown","Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype","DOMAIN OF UNKNOWN FUNCTION 724 5 (DUF5)","DOMAIN OF UNKNOWN FUNCTION 724 5 (DUF5);DOMAIN OF UNKNOWN FUNCTION 724 5 (ATDUF5)"]
["AT5G18370","brown","Leucine-rich repeat domain (NLR) receptor. Dominant negative alleles suppress catma3 autoimmunity.","DOMINANT SUPRESSOR OF CAMTA3 NUMBER 2 (DSC2)","DOMINANT SUPRESSOR OF CAMTA3 NUMBER 2 (DSC2)"]
["AT4G25670","brown","stress response NST1-like protein;(source:Araport11)","DOUBLE BENDING 1 (DOB1)","DOUBLE BENDING 1 (DOB1)"]
["AT5G25460","brown","Encodes a DUF642 cell wall protein.","DUF642 L-GALL RESPONSIVE GENE 2 (DGR2)","DUF642 L-GALL RESPONSIVE GENE 2 (DGR2)"]
["AT3G46940","brown","dUTP PYROPHOSPHATASE 1. Niehaus,et al. (PMID:35861422) identified a longer transcript not present in TAIR10 that contains an extended ORF that encodes the original protein plus 41 additional amino acids at the N-terminus that includes a predicted transit peptide.","DUTP-PYROPHOSPHATASE-LIKE 1 (DUT1)","DUTP-PYROPHOSPHATASE-LIKE 1 (DUT1)"]
["AT4G31840","brown","early nodulin-like protein 15;(source:Araport11)","EARLY NODULIN-LIKE PROTEIN 15 (ENODL15)","EARLY NODULIN-LIKE PROTEIN 15 (ENODL15); (AtENODL15)"]
["AT5G09900","brown","Encodes one of two isoforms for the 26S proteasome regulatory protein (RN) subunit RPN5. For many functions it acts redundantly with the paralogous gene RPN5b but also appears to exert independent effects.","EMBRYO DEFECTIVE 2107 (EMB2107)","EMBRYO DEFECTIVE 2107 (EMB2107);MARIPOSA (MSA);REGULATORY PARTICLE NON-ATPASE SUBUNIT 5A (RPN5A)"]
["AT1G56200","brown","Encodes a chloroplast localized protein that is essential for chloroplast development.","EMBRYO DEFECTIVE 1303 (emb1303)","EMBRYO DEFECTIVE 1303 (emb1303);GLUCOSE SENSITIVE MUTANT 3 (GSM3)"]
["AT5G40160","brown","Encodes ankyrin repeat protein EMB506. Mutations in this locus result in embryo lethality.","EMBRYO DEFECTIVE 506 (EMB506)","EMBRYO DEFECTIVE 139 (EMB139); (STT1);EMBRYO DEFECTIVE 506 (EMB506)"]
["AT4G21190","brown","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)","EMBRYO DEFECTIVE 1417 (emb1417)","EMBRYO DEFECTIVE 1417 (emb1417)"]
["AT1G79560","brown","Encodes an FtsH protease that is localized to the chloroplast and is part of a membrane localized translocation motor complex .Strong interaction with TIC inner envelope protein translocon which consists of Tic20/Tic56/Tic100/Tic214(Ycf1)(DOI:10.1105/tpc.18.00357). Mutations in this locus result in embryo lethality.","FTSH PROTEASE 12 (FTSH12)","EMBRYO DEFECTIVE 156 (EMB156);FTSH PROTEASE 12 (FTSH12);EMBRYO DEFECTIVE 1047 (EMB1047);EMBRYO DEFECTIVE 36 (EMB36)"]
["AT5G57930","brown","ACCUMULATION OF PHOTOSYSTEM ONE 2","ACCUMULATION OF PHOTOSYSTEM ONE 2 (APO2)","EMBRYO DEFECTIVE 1629 (emb1629);ACCUMULATION OF PHOTOSYSTEM ONE 2 (APO2)"]
["AT3G18390","brown","CRS1 / YhbY (CRM) domain-containing protein;(source:Araport11)","EMBRYO DEFECTIVE 1865 (EMB1865)","EMBRYO DEFECTIVE 1865 (EMB1865)"]
["AT4G28210","brown","embryo defective 1923;(source:Araport11)","EMBRYO DEFECTIVE 1923 (emb1923)","EMBRYO DEFECTIVE 1923 (emb1923)"]
["AT3G07060","brown","NHL domain-containing protein;(source:Araport11)","EMBRYO DEFECTIVE 1974 (emb1974)","EMBRYO DEFECTIVE 1974 (emb1974)"]
["AT3G07430","brown","YLMG is located in thylakoid membranes. It is involved in chloroplast division and more specifically the proper distribution of nucleoids. The function is conserved between cyanobacteria and chloroplasts.The mRNA is cell-to-cell mobile.","(YLMG1-1)","EMBRYO DEFECTIVE 1990 (emb1990); (YLMG1-1); (ATYLMG1-1)"]
["AT2G28880","brown","ADCS encodes a protein that has two functional domains. The N-terminal domain has glutamine amidotransferase activity while the C-terminal domain has aminodeoxychorismate synthase (ADCS) activity. These two domains act together to catalyze the transformation of chorismate to 4-amino-4-deoxychorismate. This reaction is required for 4-aminobenzoate (pABA) production and ultimately for folate biosynthesis. The putative target peptide of ADCS can direct GFP to the chloroplast.","EMBRYO DEFECTIVE 1997 (emb1997)","EMBRYO DEFECTIVE 1997 (emb1997);AMINODEOXYCHORISMATE SYNTHASE (ADCS)"]
["AT5G16715","brown","protein EMBRYO DEFECTIVE 2247;(source:Araport11)","EMBRYO DEFECTIVE 2247 (EMB2247)","EMBRYO DEFECTIVE 2247 (EMB2247)"]
["AT3G49170","brown","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","EMBRYO DEFECTIVE 2261 (EMB2261)","EMBRYO DEFECTIVE 2261 (EMB2261); (ECD1)"]
["AT1G24340","brown","A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. The mRNA is cell-to-cell mobile.","EMBRYO DEFECTIVE 2421 (emb2421)","EMBRYO DEFECTIVE 260 (EMB260);EMBRYO DEFECTIVE 2421 (emb2421)"]
["AT4G29060","brown","Involved in chloroplast biogenesis and early embryo development. May function as an EF-Ts to regulate plastid translation.","EMBRYO DEFECTIVE 2726 (emb2726)","EMBRYO DEFECTIVE 2726 (emb2726)"]
["AT5G19820","brown","Encodes an importin that transports HYL1, a component of the microprocessor, from the cytoplasm to the nucleus to constitute functional microprocessor, thereby affecting miRNA processing. Knockdown amiR mutants significantly reduced nuclear portion of HYL1 protein and correspondingly compromised the pri-miRNA processing in the nucleus.KETCH1 may protect RPs from the 26S proteasome-mediated degradation.","(KARYOPHERIN ENABLING THE TRANSPORT OF THE CYTOPLASMIC HYL1 (KETCH1)","EMBRYO DEFECTIVE 2734 (emb2734); (IMB3);(KARYOPHERIN ENABLING THE TRANSPORT OF THE CYTOPLASMIC HYL1 (KETCH1)"]
["AT3G12080","brown","Encodes a putative plastid-targeted GTP-binding protein that is essential for embryogenesis and chloroplast development.","EMBRYO DEFECTIVE 2738 (emb2738)","EMBRYO DEFECTIVE 2738 (emb2738); (ENGA-1); (DER)"]
["AT5G63420","brown","Encodes a member of the metallo-beta-lactamase protein family that plays a vital role in embryo morphogenesis and apical-basal pattern formation by regulating chloroplast development. In bacteria, RNase J plays an important role in rRNA maturation and in the 5&#8242; stability of mRNA.","EMBRYO DEFECTIVE 2746 (emb2746)","EMBRYO DEFECTIVE 2746 (emb2746); (RNJ);RIBONUCLEASE J (ATRNJ)"]
["AT3G06430","brown","Encodes PPR2, a pentatricopeptide repeat protein. Binds to plastid 23S rRNA and plays an important role in the first mitotic division during gametogenesis and in cell proliferation during embryogenesis.","PENTATRICOPEPTIDE REPEAT 2 (PPR2)","EMBRYO DEFECTIVE 2750 (EMB2750);PENTATRICOPEPTIDE REPEAT 2 (PPR2); (AtPPR2);PENTATRICOPEPTIDE REPEAT PROTEIN 2 (PPR2)"]
["AT4G29910","brown","Origin Recognition Complex subunit 5. Involved in the initiation of DNA replication. Interacts strongly with all ORC subunits.","EMBRYO DEFECTIVE 2798 (EMB2798)","EMBRYO DEFECTIVE 2798 (EMB2798)"]
["AT1G67320","brown","DNA primase, large subunit family;(source:Araport11)","EMBRYO DEFECTIVE 2813 (EMB2813)","EMBRYO DEFECTIVE 2813 (EMB2813)"]
["AT2G36000","brown","Encodes an mTERF protein localized in the chloroplast stroma.","EMBRYO DEFECTIVE 3114 (EMB3114)","EMBRYO DEFECTIVE 3114 (EMB3114);MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR 3 (MTERF 3);SEEDLING LETHAL (SL1)"]
["AT3G27750","brown","Encodes a pentatricopeptide repeat (PPR) protein required for the splicing of specific group II introns. Null alleles are embryo lethal.","EMBRYO DEFECTIVE 3123 (EMB3123)","EMBRYO DEFECTIVE 3123 (EMB3123);THYLAKOID ASSEMBLY 8 (THA8)"]
["AT3G63490","brown","Ribosomal protein L1p/L10e family;(source:Araport11)","EMBRYO DEFECTIVE 3126 (EMB3126)","EMBRYO DEFECTIVE 3126 (EMB3126);PLASTID RIBOSOMAL PROTEIN L1 (PRPL1);PROLINE-RICH PROTEIN-LIKE 1 (PRPL1);RIBOSOMAL PROTEIN UL1C (UL1C)"]
["AT1G12410","brown","Encodes a ClpP-related sequence. Though similar to ClpP proteins, this does not contains the highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).","CLP PROTEASE PROTEOLYTIC SUBUNIT 2 (CLP2)","EMBRYO DEFECTIVE 3146 (EMB3146);CLP PROTEASE PROTEOLYTIC SUBUNIT 2 (CLP2); (CLPR2);NUCLEAR-ENCODED CLP PROTEASE P2 (NCLPP2)"]
["AT5G39980","brown","PDM3 belongs to the P subfamily of PPR proteins.Mutants have defective chloroplasts and accumulates unspliced plastid RNAs suggesting a role in RNA splicing.","EMBRYO LETHAL 3140 (EMB3140)","EMBRYO LETHAL 3140 (EMB3140);PIGMENT-DEFECTIVE MUTANT3 (PDM3)"]
["AT3G48110","brown","glycine-tRNA ligase","EMBRYO-DEFECTIVE-DEVELOPMENT 1 (EDD1)","EMBRYO-DEFECTIVE-DEVELOPMENT 1 (EDD1); (EDD)"]
["AT2G38280","brown","Encodes a protein with in vitro AMP deaminase activity that is involved in embryogenesis. Homozygous mutant embryos fail to develop past the zygote stage.","EMBRYONIC FACTOR1 (FAC1)","EMBRYONIC FACTOR1 (FAC1);ADENOSINE 5'-MONOPHOSPHATE DEAMINASE (ATAMPD)"]
["AT5G35220","brown","Membrane-associated and ATP-independent metalloprotease; EGY1 protein contains eight trans-membrane domains at its C-terminus, and carries out beta-casein degradation in an ATP-independent manner. EGY1 is required for development of both thylakoid grana and a well-organized lamellae system in chloroplast. Additionally, EGY1 is required for the accumulation of chlorophyll and chlorophyll a/b binding (CAB) proteins (both PS I and PS II) in chloroplast membranes, and for grana formation and normal chloroplast development. Loss of EGY1 function also has an effect on endodermal plastid biogenesis. Mutant studies suggest that EGY1 is involved in the regulation of nuclear gene expression response to ammonium stress and interacts with ABA signaling.","ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 1 (EGY1)","ENHANCER OF VARIEGATION3 (EVR3);AMMONIUM OVERLY SENSITIVE 1 (AMOS1);ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN 1 (EGY1)"]
["AT1G60550","brown","enoyl-CoA hydratase/isomerase D;(source:Araport11)","ENOYL-COA HYDRATASE/ISOMERASE D (ECHID)","ENOYL-COA HYDRATASE/ISOMERASE D (ECHID); (DHNS)"]
["AT4G05520","brown","Encodes AtEHD2, one of the Arabidopsis Eps15 homology domain proteins involved in endocytosis (AtEHD1, At3g20290).","EPS15 HOMOLOGY DOMAIN 2 (EHD2)","EPS15 HOMOLOGY DOMAIN 2 (ATEHD2);EPS15 HOMOLOGY DOMAIN 2 (EHD2)"]
["AT2G43160","brown","Involved in plant trans-Golgi network (TGN) transport.","EPSIN2 (EPS2)","EPSIN2 (EPS2)"]
["AT2G22140","brown","Forms a complex with MUS81 that functions as endonuclease in DNA recombination and repair processes.","ESSENTIAL MEIOTIC ENDONUCLEASE 1B (EME1B)","ESSENTIAL MEIOTIC ENDONUCLEASE 1B (ATEME1B); (EME1B);ESSENTIAL MEIOTIC ENDONUCLEASE 1B (EME1B)"]
["AT5G25190","brown","encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.","ETHYLENE AND SALT INDUCIBLE 3 (ESE3)","ETHYLENE AND SALT INDUCIBLE 3 (ESE3)"]
["AT5G64050","brown","Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana.","GLUTAMATE TRNA SYNTHETASE (ERS)","ETHYLENE RESPONSE SENSOR (ERS);GLUTAMATE TRNA SYNTHETASE (ERS);OVULE ABORTION 3 (OVA3); (ATERS)"]
["AT1G50640","brown","encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.","ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3 (ERF3)","ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3 (ERF3); (ATERF3)"]
["AT1G12920","brown","Encodes a eukaryotic release factor one homolog.","EUKARYOTIC RELEASE FACTOR 1-2 (ERF1-2)","EUKARYOTIC RELEASE FACTOR 1-2 (ERF1-2)"]
["AT3G26618","brown","eukaryotic release factor 1-3;(source:Araport11)","EUKARYOTIC RELEASE FACTOR 1-3 (ERF1-3)","EUKARYOTIC RELEASE FACTOR 1-3 (ERF1-3)"]
["AT2G39990","brown","translation initiation factor eIF2 p47 subunit homolog","EUKARYOTIC TRANSLATION INITIATION FACTOR 2 (EIF2)","EUKARYOTIC TRANSLATION INITIATION FACTOR 2 (EIF2);ARABIDOPSIS THALIANA EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F (AteIF3f);EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F (eIF3F)"]
["AT5G25780","brown","member of eIF3b - eukaryotic initiation factor 3b","EUKARYOTIC TRANSLATION INITIATION FACTOR 3B-2 (EIF3B-2)","EUKARYOTIC TRANSLATION INITIATION FACTOR 3B-2 (EIF3B-2); (ATEIF3B-2);EUKARYOTIC TRANSLATION INITIATION FACTOR 3B (EIF3B)"]
["AT3G57290","brown","Encodes a protein that is found in not only the eif3 complex but also in association with subunits of the COP9 signalosome. eIF3e appears to be subjected to proteasome-dependent degradation that requires the PCI domain of eIF3e. The level of eIF3e present in cells appears to affect the rate of translation.","EUKARYOTIC TRANSLATION INITIATION FACTOR 3E (EIF3E)","EUKARYOTIC TRANSLATION INITIATION FACTOR 3E (EIF3E); (TIF3E1); (ATEIF3E-1); (INT-6); (ATINT6); (INT6)"]
["AT5G57870","brown","Encodes a putative eukaryotic translation initiation factor The mRNA is cell-to-cell mobile.","EUKARYOTIC TRANSLATION INITIATION FACTOR ISOFORM 4G1 (eIFiso4G1)","EUKARYOTIC TRANSLATION INITIATION FACTOR ISOFORM 4G1 (eIFiso4G1)"]
["AT2G37640","brown","member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","(EXP3)","EXPANSIN 3 (ATEXP3); (ATHEXP ALPHA 1.9); (EXP3);EXPANSIN3 (EXPA3);ARABIDOPSIS THALIANA EXPANSIN A3 (ATEXPA3)"]
["AT2G40610","brown","member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","EXPANSIN A8 (EXPA8)","EXPANSIN A8 (ATEXPA8); (EXP8); (ATEXP8); (ATHEXP ALPHA 1.11);EXPANSIN A8 (EXPA8)"]
["AT4G14890","brown","2Fe-2S ferredoxin-like superfamily protein;(source:Araport11)","FERREDOXIN C 1 (FdC1)","FERREDOXIN C 1 (FdC1)"]
["AT3G56090","brown","Encodes FERRITIN 3, AtFER3. Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life. Function as the main iron store in mammals. Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool.","FERRITIN 3 (FER3)","FERRITIN 3 (ATFER3);FERRITIN 3 (FER3)"]
["AT4G25630","brown","encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.2f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated. The mRNA is cell-to-cell mobile.","FIBRILLARIN 2 (FIB2)","FIBRILLARIN 2 (FIB2); (ATFIB2)"]
["AT5G03940","brown","mutant has Yellow first leaves; Chloroplast Signal Recognition Particle Subunit","CHLOROPLAST SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT (CPSRP54)","FIFTY-FOUR CHLOROPLAST HOMOLOGUE (FFC);54 CHLOROPLAST PROTEIN (54CP);CHLOROPLAST SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT (CPSRP54);SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT CHLOROPLAST PROTEIN (SRP54CP)"]
["AT1G51140","brown","Encodes a basic helix-loop-helix-type transcription factor involved in photoperiodism flowering. Binds to the E-box cis-element in the CONSTANS (CO) promoter to regulate flowering. Interacts with CFL1 and along with CFLAP2 negatively regulates cuticle development. Binds to the potassium channel gene KAT1 as a dimer. The DNA-binding capacity is inhibited in response to ABA through phosphorylation-dependent monomerization.","FLOWERING BHLH 3 (FBH3)","FLOWERING BHLH 3 (FBH3);ABA-RESPONSIVE KINASE SUBSTRATE 1 (AKS1);ATCFL1 ASSOCIATED PROTEIN 1 (CFLAP1)"]
["AT3G14110","brown","Encodes a novel coiled-coil, TPR domain containing protein that is localized to the chloroplast membrane and is involved in chlorophyll biosynthesis. Mutants accumulate protochlorophyllide, an intermediate in the chlorophyll biosynthesis pathway, in dark and release singlet oxygen in plastids in a controlled and non-invasive manner upon a dark/light shift.","FLUORESCENT IN BLUE LIGHT (FLU)","FLUORESCENT IN BLUE LIGHT (FLU)"]
["AT5G66380","brown","Encodes a folate transporter that is located in the chloroplast envelope and is able to mediate exogenous folate uptake when expressed in E. coli. However, this is not the sole folate transporter for chloroplasts as null mutants of this gene have no discernible phenotype when grown under folate-sufficient conditions and contained wild-type levels of folates in leaves.","FOLATE TRANSPORTER 1 (FOLT1)","FOLATE TRANSPORTER 1 (ATFOLT1);FOLATE TRANSPORTER 1 (FOLT1)"]
["AT1G07110","brown","Encodes the bifunctional enzyme fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase.","FRUCTOSE-2,6-BISPHOSPHATASE (F2KP)","FRUCTOSE-2,6-BISPHOSPHATASE (F2KP); (ATF2KP); (FKFBP)"]
["AT2G21330","brown","Plastid isoform of fructose-bisphosphate aldolase 1. This is one of three plastid isoforms and arose with FBA2, from a recent duplication. Functions in carbon fixation via Calvin-Benson-Bassham cycle.","FRUCTOSE-BISPHOSPHATE ALDOLASE 1 (FBA1)","FRUCTOSE-BISPHOSPHATE ALDOLASE 1 (FBA1); (ATFBA1)"]
["AT3G02450","brown","Proteolytically inactive member of the FtsH (filamentation-temperature-sensitive protein H) protease family due to mutations in the protease domain.","FTSH (FILAMENTATION-TEMPERATURE-SENSITIVE PROTEIN H) INACTIVE 3 (FTSHI3)","FTSH (FILAMENTATION-TEMPERATURE-SENSITIVE PROTEIN H) INACTIVE 3 (FTSHI3)"]
["AT5G53170","brown","encodes an FtsH protease that is localized to the chloroplast and the mitochondrion","FTSH PROTEASE 11 (FTSH11)","FTSH PROTEASE 11 (FTSH11)"]
["AT1G03160","brown","A new plant-specific member of the dynamin superfamily; defines a new protein class within the dynamin superfamily of membrane remodeling GTPases that regulates organization of the thylakoid network in plants. Targeted to chloroplasts and associated with thylakoid and envelope membranes as punctate structures. Knockout mutants have abnormalities in chloroplast and thylakoid morphology, including disorganized grana stacks and alterations in the relative proportions of grana and stroma thylakoids. Overexpression of FZL-GFP also conferred defects in thylakoid organization.","FZO-LIKE (FZL)","FZO-LIKE (FZL)"]
["AT2G26300","brown","Encodes an alpha subunit of a heterotrimeric GTP-binding protein. The active GTP-bound form of GPA1 binds to the GTG1 and GTG2 abscisic acid (ABA) receptors and appears to affect their GTPase and GTP-binding activity, and hence, ABA binding abilities. GPA1 is a positive regulator in ABA-mediated inhibition of stomatal opening. Plants with recessive mutant alleles have complex phenotypes including: reduced brassinolide response, reduced cell divisions, round leaves, short hypocotyls. It is likely to be involved in the signaling events that trigger unfolded protein response-associated cell death. GPA1 is also involved in sugar signaling. The mRNA is cell-to-cell mobile.","G PROTEIN ALPHA SUBUNIT 1 (GP ALPHA 1)","G PROTEIN ALPHA SUBUNIT 1 (GPA1);G PROTEIN ALPHA SUBUNIT 1 (GP ALPHA 1);ARABIDOPSIS THALIANA G PROTEIN ALPHA SUBUNIT 1 (ATGPA1)"]
["AT5G62270","brown","Ribosomal protein L20;(source:Araport11). Required for proper mitochondrial cristae formation. Expressed throughout plant. Mutants are defective in late stages of megagametogenesis. Pollen tube defective. Gametophytic lethality is probably due to mitochondrial disfunction.","GAMETE CELL DEFECTIVE 1 (GCD1)","GAMETE CELL DEFECTIVE 1 (GCD1);RIBOSOMAL PROTEIN MS75 (MS75)"]
["AT5G56860","brown","Encodes a member of the GATA factor family of zinc finger transcription factors. Modulate chlorophyll biosynthesis and glutamate synthase (GLU1/Fd-GOGAT) expression.","GATA, NITRATE-INDUCIBLE, CARBON METABOLISM-INVOLVED (GNC)","GATA TRANSCRIPTION FACTOR 21 (GATA21);GATA, NITRATE-INDUCIBLE, CARBON METABOLISM-INVOLVED (GNC)"]
["AT1G64790","brown","ILITHYIA (ILA) is a HEAT repeat protein involved in plant immunity. The gene is also involved in systemic acquired resistance induced by P. syringae expressing avrRps4. Loss-of-function mutants of ILA caused pleiotropic defects in the mutant plants. The mutant plants are smaller in size and the leaves are serrated and yellow to light green in color. Required for bacterium-triggered stomatal closure.","ILITHYIA (ILA)","GENERAL CONTROL NON-DEREPRESSIBLE 1 (GCN1);NON-RESPONDING TO OXYLIPINS 7 (NOXY7);ILITHYIA (ILA)"]
["AT1G64550","brown","Encodes a member of GCN subfamily. Predicted to be involved in stress-associated protein translation control. The mutant is affected in MAMP ((microbe-associated molecular patterns)-induced stomatal closure, but not other MAMP-induced responses in the leaves. Arabidopsis has five ABCF proteins, which are all closely related by sequence to yeast GCN20. None of these five are individually required for GCN2 kinase activity.","ATP-BINDING CASSETTE F3 (ABCF3)","GENERAL CONTROL NON-REPRESSIBLE 3 (ATGCN3);GENERAL CONTROL NON-REPRESSIBLE 3 (GCN3);ATP-BINDING CASSETTE F3 (ABCF3); (ATABCF3);SUSCEPTIBLE TO CORONATINE-DEFICIENT PST DC3000 5 (SCORD5);GENERAL CONTROL NONDEREPRESSIBLE 20 (GCN20); (ATGCN20)"]
["AT4G09000","brown","Encodes a 14-3-3 gene, designated GRF1 chi (for general regulatory factor1-G-box factor 14-3-3 homolog isoform chi). The major native forms of 14-3-3s are homo- and hetero-dimers, the biological functions of which are to interact physically with specific client proteins and thereby effect a change in the client. As a result, 14-3-3s are involved in a vast array of processes such as the response to stress, cell-cycle control, and apoptosis, serving as adapters, activators, and repressors. There are currently 133 full-length sequences available.","GENERAL REGULATORY FACTOR 1 (GRF1)","GENERAL REGULATORY FACTOR 1 (GRF1);GENERAL REGULATORY FACTOR1-G-BOX FACTOR 14-3-3 HOMOLOG ISOFORM CHI (GF14 CHI)"]
["AT3G02520","brown","Encodes GF14 &#957;, a 14-3-3 protein isoform (14-3-3&#957;).","GENERAL REGULATORY FACTOR 7 (GRF7)","GENERAL REGULATORY FACTOR 7 (GRF7); (GF14 NU)"]
["AT4G27600","brown","Encodes a phosphofructokinase B-type carbohydrate kinase family protein, NARA5. Regulates photosynthetic gene expression.","GENES NECESSARY FOR THE ACHIEVEMENT OF RUBISCO ACCUMULATION 5 (NARA5)","GENES NECESSARY FOR THE ACHIEVEMENT OF RUBISCO ACCUMULATION 5 (NARA5)"]
["AT3G14550","brown","Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots.","GERANYLGERANYL PYROPHOSPHATE SYNTHASE 3 (GGPS3)","GERANYLGERANYL PYROPHOSPHATE SYNTHASE 3 (GGPS3);GERANYL-FARNESYL PYROPHOSPHATE SYNTHASE 2 (GFPPS2); (ATGFPPS2); (GGPPS7)"]
["AT1G77130","brown","Encodes a glucuronyltransferase responsible for the addition of GlcA residues onto xylan and for secondary wall deposition.","PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 2 (PGSIP2)","GLUCURONIC ACID SUBSTITUTION OF XYLAN 3 (GUX3);PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 2 (PGSIP2)"]
["AT1G23310","brown","Identified by cloning the gene that corresponded to a purified protein having glyoxylate aminotransferase activity. Localized to the peroxisome and thought to be involved in photorespiration/ metabolic salvage pathway.","GLUTAMATE:GLYOXYLATE AMINOTRANSFERASE (GGT1)","GLUTAMATE:GLYOXYLATE AMINOTRANSFERASE (GGT1);ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1 (AOAT1);GLUTAMATE:GLYOXYLATE AMINOTRANSFERASE 1 (GGAT1)"]
["AT3G55040","brown","Encodes a member of the lambda family of glutathione transferases. It has thiol transferase activity and self S-glutathionylation activity in vitro.","GLUTATHIONE TRANSFERASE LAMBDA 2 (GSTL2)","GLUTATHIONE TRANSFERASE LAMBDA 2 (GSTL2)"]
["AT1G79530","brown","Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots.","GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 1 (GAPCP-1)","GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 1 (GAPCP-1)"]
["AT3G14415","brown","Encodes a glycolate oxidase that modulates reactive oxygen species-mediated signal transduction during nonhost resistance. The mRNA is cell-to-cell mobile.","GLYCOLATE OXIDASE 2 (GOX2)","GLYCOLATE OXIDASE 2 (GOX2)"]
["AT1G64185","brown","Vicinal oxygen chelate (VOC) superfamily member.","GLYOXALASE I-LIKE;5 (GLXI-LIKE;5)","GLYOXALASE I-LIKE;5 (GLXI-LIKE;5)"]
["AT5G44190","brown","Encodes GLK2, Golden2-like 2, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK1, Golden2-like 1, is encoded by At2g20570. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus.","GOLDEN2-LIKE 2 (GLK2)","GOLDEN2-LIKE 2 (GLK2);GBF'S PRO-RICH REGION-INTERACTING FACTOR 2 (GPRI2); (ATGLK2)"]
["AT5G06110","brown","Encodes a ZRF1 chromatin regulator. Functions in regulating plant growth and development.","GONIDIALESS A/ZUOTIN RELATED FACTOR A2 (ATGLSA2)","GONIDIALESS A/ZUOTIN RELATED FACTOR A1 (ATGLSA1);ZUOTIN-RELATED FACTOR 1B (ZRF1b);GONIDIALESS A/ZUOTIN RELATED FACTOR A2 (ATGLSA2)"]
["AT3G53320","brown","Encodes a microtubule-associated protein track growing microtubule plus ends.","GROWING PLUS-END TRACKING PROTEIN 2 (GPT2)","GROWING PLUS-END TRACKING PROTEIN 2 (GPT2)"]
["AT4G03190","brown","Encodes a cytoplasmic localized atypical F box protein belonging to the TIR1 subfamily. This protein forms SCF complexes with ASK1 and CUL1 and interacts with Aux/IAA proteins in an auxin-dependent manner. CUL1 binding is not required for AFB1-triggered rapid root growth inhibition.Localization to cytoplasm is dependent upon F-box domain. It also has sequence similarity to the yeast protein GRR1, which is involved in glucose repression.","GRR1-LIKE PROTEIN 1 (GRH1)","GRR1-LIKE PROTEIN 1 (GRH1); (ATGRH1);A. THALIANA GERMIN-LIKE PROTEIN 1 (ATGER1);AUXIN SIGNALING F BOX PROTEIN 1 (AFB1)"]
["AT3G60330","brown","H[+]-ATPase 7;(source:Araport11)","H(+)-ATPASE 7 (HA7)","H(+)-ATPASE 7 (AHA7);H(+)-ATPASE 7 (HA7)"]
["AT5G59720","brown","encodes a low molecular weight heat shock protein that contains the heat shock element in the promoter region. Expression is induced in response to heat shock.","HEAT SHOCK PROTEIN 18.2 (HSP18.2)","HEAT SHOCK PROTEIN 18.2 (HSP18.2)"]
["AT2G33210","brown","Involved in the RNA splicing of rpl2 and ccmFC introns in mitochondria.","HEAT SHOCK PROTEIN 60-2 (HSP60-2)","HEAT SHOCK PROTEIN 60-2 (HSP60-2); (HSP60)"]
["AT5G56030","brown","A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Interacts with HsfA1d in the cytosol and the nucleus and negatively regulates HsfA1d. Did not bind to AtHsfA4c. The mRNA is cell-to-cell mobile.","HEAT SHOCK PROTEIN 81-2 (HSP81-2)","HEAT SHOCK PROTEIN 81.2 (HSP81.2);HEAT SHOCK PROTEIN 81-2 (HSP81-2)"]
["AT5G56000","brown","HEAT SHOCK PROTEIN 81.4;(source:Araport11)","HEAT SHOCK PROTEIN 81.4 (Hsp81.4)","HEAT SHOCK PROTEIN 90.4 (AtHsp90.4);HEAT SHOCK PROTEIN 81.4 (Hsp81.4)"]
["AT1G79930","brown","encodes high molecular weight heat shock protein 70 not a HSP90 homolog, mRNA is constitutively expressed but transiently induced after heat shock","HEAT SHOCK PROTEIN 91 (HSP91)","HEAT SHOCK PROTEIN 91 (HSP91); (AtHsp70-14)"]
["AT5G15802","brown","chaperone;(source:Araport11)","HIGH CHLOROPHYLL FLUORESCENCE (HCF222)","HIGH CHLOROPHYLL FLUORESCENCE (HCF222)"]
["AT5G52440","brown","HCF106; nuclear gene for chloroplast. Thylakoid membrane delta pH translocation pathway component protein; related to Escherichia coli TatA and TatB The mRNA is cell-to-cell mobile.","HIGH CHLOROPHYLL FLUORESCENCE 106 (HCF106)","HIGH CHLOROPHYLL FLUORESCENCE 106 (HCF106)"]
["AT4G31560","brown","Encodes HCF153, a 15-KDa protein involved in the biogenesis of the cytochrome b(6)f complex. Associated with the thylakoid membrane.","HIGH CHLOROPHYLL FLUORESCENCE 153 (HCF153)","HIGH CHLOROPHYLL FLUORESCENCE 153 (HCF153)"]
["AT3G63190","brown","The gene encodes a chloroplast ribosome recycling factor homologue. Analysis of mutants revealed its role in the chloroplast development and eary stages of embryo development.","RIBOSOME RECYCLING FACTOR, CHLOROPLAST PRECURSOR (RRF)","HIGH CHLOROPHYLL FLUORESCENCE AND PALE GREEN MUTANT 108 (HFP108);CHLOROPLAST RIBOSOME RECYCLING FACTOR (cpRRF);ARABIDOPSIS THALIANA CHLOROPLAST RIBOSOME RECYCLING FACTOR (AtcpRRF);RIBOSOME RECYCLING FACTOR, CHLOROPLAST PRECURSOR (RRF)"]
["AT3G24430","brown","Encodes chloroplast protein HCF101 (high chlorophyll fluorescence 101). Serves as a chloroplast scaffold protein that specifically assembles [4Fe-4S] clusters and transfers them to the chloroplast membrane and soluble target proteins.","HIGH-CHLOROPHYLL-FLUORESCENCE 101 (HCF101)","HIGH-CHLOROPHYLL-FLUORESCENCE 101 (HCF101)"]
["AT5G23420","brown","Encodes HMGB6, a protein belonging to the subgroup of HMGB (high mobility group B) proteins. Localized in the nucleus. Binds to supercoiled DNA in vitro. HMGB6 is phosphorylated by protein kinase CK2alpha within its acidic C-terminal domain.","HIGH-MOBILITY GROUP BOX 6 (HMGB6)","HIGH-MOBILITY GROUP BOX 6 (HMGB6)"]
["AT4G26900","brown","encodes a glutamine amidotransferase and cyclase, catalyzes the fifth and sixth steps of the histidine biosynthetic pathway","HIS HF (AT-HF)","HIS HF (AT-HF); (HISN4)"]
["AT5G10720","brown","member of Histidine Kinase","HISTIDINE KINASE 5 (HK5)","HISTIDINE KINASE 5 (HK5);HISTIDINE KINASE 5 (AHK5);CYTOKININ INDEPENDENT 2 (CKI2)"]
["AT5G63890","brown","Encodes histidinol dehydrogenase. Up-regulated in response to UV-B.","HISTIDINOL DEHYDROGENASE (HDH)","HISTIDINOL DEHYDROGENASE (ATHDH);HISTIDINOL DEHYDROGENASE (HDH);HISTIDINE BIOSYNTHESIS 8 (HISN8)"]
["AT3G46100","brown","histidyl-tRNA synthetase","HISTIDYL-TRNA SYNTHETASE 1 (HRS1)","HISTIDYL-TRNA SYNTHETASE 1 (ATHRS1);HISTIDYL-TRNA SYNTHETASE 1 (HRS1)"]
["AT5G56740","brown","Encodes an enzyme with histone acetyltransferase activity. Histone H4 is the primary substrate for the enzyme. Prior acetylation of lysine 12 of histone H4 reduces radioactive acetylation by HAG2. HAG2 acetylates histone H4 lysine 12.","HISTONE ACETYLTRANSFERASE OF THE GNAT FAMILY 2 (HAG2)","HISTONE ACETYLTRANSFERASE OF THE GNAT FAMILY 2 (HAG2); (HAC07); (HAG02); (HAC7)"]
["AT5G61060","brown","Encodes a member of the histone deacetylase family. Class II RPD3-like family HDAC member which controls negative responses to salinity stress.","HISTONE DEACETYLASE 5 (HDA05)","HISTONE DEACETYLASE 5 (HDA05)"]
["AT3G61150","brown","Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family.","HOMEODOMAIN GLABROUS 1 (HDG1)","HOMEODOMAIN GLABROUS 1 (HDG1);HOMEODOMAIN-GLABRA2 1 (HD-GL2-1)"]
["AT3G63250","brown","Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds.","HOMOCYSTEINE METHYLTRANSFERASE 2 (HMT2)","HOMOCYSTEINE METHYLTRANSFERASE-2 (ATHMT-2);HOMOCYSTEINE METHYLTRANSFERASE 2 (HMT2);HOMOCYSTEINE METHYLTRANSFERASE-2 (HMT-2)"]
["AT4G17520","brown","Hyaluronan / mRNA binding family;(source:Araport11)","HYALURONAN/MRNA BINDING FAMILY PROTEIN (HLN)","HYALURONAN/MRNA BINDING FAMILY PROTEIN (HLN)"]
["AT4G26670","brown","Member of PRAT protein family which has a unique system for importing and exporting proteins from chloroplasts. Role in protein import into chloroplasts.","HYPOTHETICAL PROTEIN 20 (HP20)","HYPOTHETICAL PROTEIN 20 (HP20)"]
["AT4G22260","brown","Similar to mitochondrial alternative oxidase. im mutants have a variegated phenotype and fail to differentiate chloroplasts in the majority of their cells under high light intensity continuous illumination. The white tissues of immutans accumulate phytoene, a non-colored C40 carotenoid intermediate. This suggests that immutans controls, either directly or indirectly, the activity of phytoene desaturase (PDS), the enzyme that converts phytoene to zeta-carotene in higher plants. However, im is not the structural gene for PDS. It is located in the lumenar face of the thylakoid membrane. IM is expressed ubiquitously in plant tissues.","IMMUTANS (IM)","IMMUTANS (IM); (IM1);PLASTID TERMINAL OXIDASE (PTOX)"]
["AT4G27640","brown","Nuclear import receptor for GRF-interacting factors (GIFs),roles in ovule development.","IMPORTIN-BETA 4 (IMB4)","IMPORTIN-BETA 4 (IMB4)"]
["AT2G24060","brown","SUPPRESSOR OF VARIEGATION9 (SVR9),encodes a chloroplast-localized prokaryotic type translation initiation factor 3. Mutant plants shows both chloroplast development defect, and a series of leaf developmental abnormalities including more serrated leaf margin, disorganized mesophyll cells, and altered cotyledon venation patterns.","(ATINFC-2)","INITIATION FACTOR 3-2 (ATIF3-2);SUPPRESSOR OF VARIEGATION9 (SVR9); (ATINFC-2)"]
["AT2G17130","brown","Encodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase.","ISOCITRATE DEHYDROGENASE SUBUNIT 2 (IDH2)","ISOCITRATE DEHYDROGENASE SUBUNIT 2 (IDH2);ISOCITRATE DEHYDROGENASE II (IDH-II)"]
["AT3G02780","brown","Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway.","ISOPENTENYL PYROPHOSPHATE:DIMETHYLALLYL PYROPHOSPHATE ISOMERASE 2 (IPP2)","ISOPENTENYL PYROPHOSPHATE:DIMETHYLALLYL PYROPHOSPHATE ISOMERASE 2 (IPP2); (IPIAT1);ISOPENTENYL DIPHOSPHATE ISOMERASE 2 (IDI2)"]
["AT5G20040","brown","Encodes tRNA isopentenyltransferase AtIPT9.","ISOPENTENYLTRANSFERASE 9 (IPT9)","ISOPENTENYLTRANSFERASE 9 (IPT9)"]
["AT5G63080","brown","Encodes a HR demethylase that acts as a positive regulator of seed germination in the PHYB-PIL5-SOM pathway.","JUMONJI DOMAIN-CONTAINING PROTEIN 20 (JMJ20)","JUMONJI DOMAIN-CONTAINING PROTEIN 20 (JMJ20)"]
["AT5G23430","brown","One of four katanin p80 subunits. Involved in targeting of katanin complex to crossover and branch points to properly sever microtubules.","KATANIN P80 SUBUNIT 4 (KTN80.4)","KATANIN P80 SUBUNIT 4 (KTN80.4)"]
["AT4G08150","brown","A member of class I knotted1-like homeobox gene family (together with KNAT2). Similar to the knotted1 (kn1) homeobox gene of maize. Normally expressed in the peripheral and rib zone of shoot apical meristem but not in the leaf primordia. It is also expressed in the fourth floral whorl, in the region that would become style, particularly in the cell surrounding the transmitting tissue. No expression was detected in the first three floral whorls. Expression is repressed by auxin and AS1 which results in the promotion of leaf fate.","KNOTTED-LIKE FROM ARABIDOPSIS THALIANA (KNAT1)","KNOTTED-LIKE FROM ARABIDOPSIS THALIANA (KNAT1);BREVIPEDICELLUS (BP);BREVIPEDICELLUS 1 (BP1)"]
["AT1G74910","brown","KONJAC1 is imilar to sugar pyrophosphorylases but has an insertion of 2 AA in the pyrophosphorylase consensus motif that is highly conserved in GMPPs. It lacks GDP-mannose pyrophosphorylase activity but can simulate the GDP-mannose pyrophosphorylase activity of VTC1.","KONJAC 1 (KJC1)","KONJAC 1 (KJC1)"]
["AT5G21160","brown","Encodes a protein with sequence similarity to mRNA binding proteins from humans. LARP1a is involved in mRNA degradation in response to heat stress. Upon heat stress LARP1a interacts with XRN4 and appears to be responsible for addressing XRN4 to the polysome. LARP1/XRN4 double mutants are impaired in thermotolerance and lower levels of heat induced RNA turnover. LARP1 is phosphorylated by TORC1. LARP1 represses the translation of 5&#8242;TOP mRNAs when TORC1 activity is low. TOR-LARP1-5&#8242;TOP mRNA signaling regulates ribosome biogenesis in diverse eukaryotes, including plants and animals. (PMID:33054972)","LA RELATED PROTEIN 1A (LARP1A)","LA RELATED PROTEIN 1A (LARP1A);LA RELATED PROTEIN 1A (ATLARP1A)"]
["AT2G46140","brown","Late embryogenesis abundant protein;(source:Araport11)","LATE EMBRYOGENESIS ABUNDANT 27 (LEA27)","LATE EMBRYOGENESIS ABUNDANT 27 (LEA27)"]
["AT1G03475","brown","Encodes coproporphyrinogen III oxidase, a key enzyme in the biosynthetic pathway of chlorophyll and heme, a tetrapyrrole pathway. Mutants express cytological and molecular markers associated with the defense responses, usually activated by pathogen infection.","LESION INITIATION 2 (LIN2)","LESION INITIATION 2 (LIN2); (HEMF1); (ATCPO-I)"]
["AT2G24200","brown","Cytosol aminopeptidase family protein;(source:Araport11)","LEUCYL AMINOPEPTIDASE 1 (LAP1)","LEUCYL AMINOPEPTIDASE 1 (LAP1); (ATLAP1)"]
["AT5G64813","brown","The LIP1 gene encodes a small GTPase that influences the light input pathway of the plant circadian network. An MBP:LIP1 fusion protein has GTP hydrolyzing abilities in vitro. In plants, LIP1 seems to play a negative role in regulating circadian period that can be suppressed by light. LIP1 also seems to negatively affect light-pulse-dependent resetting of the clock, especially during the first portion of the subjective evening. LIP1 expression levels are not significantly affected by the circadian clock in seedlings grown under LL conditions. The levels of the YFP:LIP1 protein expressed under the control of the 35S promoter, shows a low amplitude variation, with protein levels peaking near the beginning of subjective night under LL conditions. In hypocotyl epidermal cells of dark and light-grown seedlings, a YFP:LIP1 fusion protein can be seen in the cytoplasm and the nucleus, and does not cluster in nuclear speckles. LIP1 may also be involved in photomorphogenesis. The mRNA is cell-to-cell mobile.","LIGHT INSENSITIVE PERIOD1 (LIP1)","LIGHT INSENSITIVE PERIOD1 (LIP1)"]
["AT3G55760","brown","Alters the glucan structures at the starch granule surface and thereby influences the action of both starch-synthesizing and -degrading enzymes.","LIKE EARLY STARVATION (LESV)","LIKE EARLY STARVATION (LESV)"]
["AT2G20860","brown","LIP1,Lipoic acid synthase,","LIPOIC ACID SYNTHASE 1 (LIP1)","LIPOIC ACID SYNTHASE 1 (LIP1)"]
["AT1G67560","brown","PLAT/LH2 domain-containing lipoxygenase family protein;(source:Araport11)","LIPOXYGENASE 6 (LOX6)","LIPOXYGENASE 6 (LOX6);ARABIDOPSIS THALIANA LIPOXYGENASE 6 (ATLOX6)"]
["AT1G04640","brown","Lipoyltransferase, located in mitochondria but not found in chloroplasts","LIPOYLTRANSFERASE 2 (LIP2)","LIPOYLTRANSFERASE 2 (LIP2)"]
["AT2G27230","brown","Encodes a nuclear-localized transcriptional activator with weak sequence similarity to basic helix-loop-helix(bHLH)-domain proteins. It promotes the production of stele cells in root meristems and is required to establish and maintain the normal vascular cell number and pattern in primary and lateral roots.","LONESOME HIGHWAY (LHW)","LONESOME HIGHWAY (LHW)"]
["AT1G06150","brown","Encodes a LHW-like protein with 79% amino acid identity to LHW.","EMBRYO DEFECTIVE 1444 (EMB1444)","LONESOME HIGHWAY LIKE 1 (LHL1);EMBRYO DEFECTIVE 1444 (EMB1444)"]
["AT5G23670","brown","Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum.","LONG CHAIN BASE2 (LCB2)","LONG CHAIN BASE2 (LCB2)"]
["AT5G51545","brown","Encodes LPA2 (low psii accumulation2), an intrinsic thylakoid membrane protein required for efficient assembly of Photosystem II.","LOW PSII ACCUMULATION2 (LPA2)","LOW PSII ACCUMULATION2 (LPA2)"]
["AT4G21610","brown","Contains the same novel zinc finger motif with LSD1, a negative regulator of cell death and defense response. Due to differential splicing, it encodes two different proteins, one of which contains an additional, putative DNA binding motif. Northern analysis demonstrated that LOL2 transcripts containing the additional DNA binding motif are predominantly upregulated after treatment with both virulent and avirulent Pseudomonas syringae pv maculicola strains.","LSD ONE LIKE 2 (LOL2)","LSD ONE LIKE 2 (LOL2)"]
["AT5G60270","brown","Concanavalin A-like lectin protein kinase family protein;(source:Araport11)","L-TYPE LECTIN RECEPTOR KINASE I.7 (LECRK-I.7)","L-TYPE LECTIN RECEPTOR KINASE I.7 (LECRK-I.7)"]
["AT2G43690","brown","Concanavalin A-like lectin protein kinase family protein;(source:Araport11)","L-TYPE LECTIN RECEPTOR KINASE V.3 (LECRK-V.3)","L-TYPE LECTIN RECEPTOR KINASE V.3 (LECRK-V.3)"]
["AT5G04710","brown","Plastid localized metalloaminopeptidase.","M18 ASPARTYL AMINOPEPTIDASE2 (DAP2)","M18 ASPARTYL AMINOPEPTIDASE2 (DAP2)"]
["AT5G50850","brown","Transketolase family protein;(source:Araport11)","MACCI-BOU (MAB1)","MACCI-BOU (MAB1)"]
["AT4G15570","brown","Similar to yeast Sen1 (splicing endonuclease 1)helicase protein. Involved in female gametophyte development. The mRNA is cell-to-cell mobile.","MAGATAMA 3 (MAA3)","MAGATAMA 3 (MAA3)"]
["AT2G15890","brown","Encodes CBP1, a regulator of transcription initiation in central cell-mediated pollen tube guidance.","MATERNAL EFFECT EMBRYO ARREST 14 (MEE14)","MATERNAL EFFECT EMBRYO ARREST 14 (MEE14);CCG-BINDING PROTEIN 1 (CBP1)"]
["AT4G26500","brown","Sulfur acceptor that interacts with and activates the cysteine desulfurases, AtSufS in plastids and AtNifS1 in mitochondria, and both activations are vital during embryogenesis. Dual localization in mitochondria and chloroplasts. Involved in Fe-S cluster biogenesis in mitochondria and plastids. Expressed in all major tissues, with higher expression in green parts. Its expression is light-dependent and regulated at the mRNA level. Activates the cysteine desulfurase activity of CpNifS for chloroplastic iron-sulfur cluster biogenesis.","CHLOROPLAST SULFUR E (CPSUFE)","MBRYO DEFECTIVE 1374 (EMB1374);CHLOROPLAST SULFUR E (CPSUFE);ARABIDOPSIS THALIANA SULFUR E (ATSUFE);SULFUR E 1 (SUFE1);HOMOLOG OF E.COLI BOLA 1 (BOLA1); (SUFE)"]
["AT4G04780","brown","Encodes the med21 subunit of the mediator complex which is involved in transcriptional regulation. MED21 interacts physically with the E3 ligase HUB1 and this interaction may be important in mediation defense responses to fungal pathogens.","MEDIATOR 21 (MED21)","MEDIATOR 21 (MED21)"]
["AT1G64720","brown","membrane related protein CP5","MEMBRANE RELATED PROTEIN CP5 (CP5)","MEMBRANE RELATED PROTEIN CP5 (CP5)"]
["AT2G45240","brown","Encodes a cytoplasmic MAP1 like methionine aminopeptidase which is involved in removing the N-terminal methionine from proteins. Induced mutants using RNAi technology which knocks out both MAP1 and MAP2 like genes show abnormal development.","METHIONINE AMINOPEPTIDASE 1A (MAP1A)","METHIONINE AMINOPEPTIDASE 1A (MAP1A)"]
["AT2G44180","brown","Encodes a MAP2 like methionine aminopeptidase. In MAP1A mutant background plants show an increased sensitivity to fumagillin resulting in defects in development. Phenotype is similar to RNAi lines which knock out all MAP2/MAP1 loci.","METHIONINE AMINOPEPTIDASE 2A (MAP2A)","METHIONINE AMINOPEPTIDASE 2A (MAP2A)"]
["AT1G11310","brown","A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO2 belongs to the clade IV, with AtMLO3, AtMLO6 and AtMLO12. The gene is expressed during early seedling growth, in roots, in vascular system of cotyledons and young leaves,and in fruit abscission zone; it was not expressed in anthers and pollen, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s). mlo resistance in A. thaliana does not involve the signaling molecules ethylene, jasmonic acid or salicylic acid, but requires a syntaxin, glycosyl hydrolase and ABC transporter. It is a novel virulence target of the P. syringae type III secreted effector HopZ2.","MILDEW RESISTANCE LOCUS O 2 (MLO2)","MILDEW RESISTANCE LOCUS O 2 (ATMLO2);POWDERY MILDEW RESISTANT 2 (PMR2);MILDEW RESISTANCE LOCUS O 2 (MLO2)"]
["AT2G04540","brown","Encodes a mitochondrial beta-ketoacyl-ACP synthase.","MITOCHONDRIAL BETA-KETOACYL-ACP SYNTHASE (MTKAS)","MITOCHONDRIAL BETA-KETOACYL-ACP SYNTHASE (MTKAS)"]
["AT2G30160","brown","Mitochondrial iron transport protein. Member of the substrate carrier family (MCF) of protein transporters.","MITOCHONDRIAL IRON TRANSPORTER 1 (MIT1)","MITOCHONDRIAL IRON TRANSPORTER 1 (MIT1)"]
["AT5G01340","brown","Transports citrate, isocitrate and aconitate, succinate and fumarate. Catalyzes a fast counter-exchange transport as well as a low uniport of substrates, exhibits a higher transport affinity for tricarboxylates than dicarboxylates. Might be involved in storage oil mobilization 78 at early stages of seedling growth and in nitrogen assimilation in root tissue by 79 catalyzing citrate/isocitrate or citrate/succinate exchanges.","MITOCHONDRIAL SUCCINATE-FUMARATE CARRIER 1 (mSFC1)","MITOCHONDRIAL SUCCINATE-FUMARATE CARRIER 1 (mSFC1);SUCCINATE/FUMARATE CARRIER 1 (SFC1); (AtmSFC1)"]
["AT3G18165","brown","Encodes MOS4 (Modifier of snc1, 4), a nuclear protein homologous to human Breast Cancer-Amplified Sequence (BCAS2). MOS4 interacts with AtCDC5 and PRL1. All three proteins are essential for plant innate immunity.","MODIFIER OF SNC1,4 (MOS4)","MODIFIER OF SNC1,4 (MOS4)"]
["AT3G27820","brown","Encodes a peroxisome membrane-bound monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2","MONODEHYDROASCORBATE REDUCTASE 4 (MDAR4)","MONODEHYDROASCORBATE REDUCTASE 4 (ATMDAR4);MONODEHYDROASCORBATE REDUCTASE 4 (MDAR4)"]
["AT2G33340","brown","Encodes MAC3B, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity. Regulator of flowering time.","MOS4-ASSOCIATED COMPLEX 3B (MAC3B)","MOS4-ASSOCIATED COMPLEX 3B (MAC3B);PLANT U-BOX 60 (PUB60)"]
["AT3G13100","brown","member of MRP subfamily","ATP-BINDING CASSETTE C7 (ABCC7)","MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 7 (ATMRP7); (MRP7);MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 7 (MRP7);ATP-BINDING CASSETTE C7 (ABCC7)"]
["AT5G46020","brown","MUSE7 was identified in a forward genetic screen to identify snc1 enhancers using a mos4 snc1 background. muse7 mos4 snc1 plants are morphologiclly similar to snc1 plants with slightly twisted leaves. The triple mutant also shows PR gene activation and enhanced resistance to pathogens, like the snc1 single mutant. It is a single copy gene conserved in plants and metazoans.MUSE7 encodes an evolutionarily conserved putative kinase substrate of unknown function that affects the accumulation of NLR proteins.","MUTANT, SNC1-ENHANCING, 7 (MUSE7)","MUTANT, SNC1-ENHANCING, 7 (MUSE7)"]
["AT3G18524","brown","Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7.","MUTS HOMOLOG 2 (MSH2)","MUTS HOMOLOG 2 (MSH2); (ATMSH2)"]
["AT5G62470","brown","Encodes a R2R3 type Myb transcription factor whose expression is strongly induced by abscisic acid. Mediates abscisic acid signaling during drought stress response. Promotes seed fatty acid accumulation.","MYB DOMAIN PROTEIN 96 (MYB96)","MYB DOMAIN PROTEIN 96 (MYB96)"]
["AT1G04280","brown","Encodes a mitochondrial CaM/Ca2+-dependent NAD+ kinase.","NAD KINASE-CAM DEPENDENT (NADKC)","NAD KINASE-CAM DEPENDENT (NADKC)"]
["AT1G74560","brown","Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP2. Bind histones Histone2A and Histone2B and associate with chromatin in vivo. Plant mutated in both NRP1 and NRP2 genes show hypersensitivity to genotoxic stresses including UV and DSB-inducing agent Bleomycin. NRP genes act synergistically with NAP1 genes in promoting somatic homologous recombination.","NAP1-RELATED PROTEIN 1 (NRP1)","NAP1-RELATED PROTEIN 1 (NRP1)"]
["AT4G01940","brown","Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU2 and 3 than to NFU4 and 5. Targeted to the chloroplast.","NFU DOMAIN PROTEIN 1 (NFU1)","NFU DOMAIN PROTEIN 1 (NFU1); (AtCNFU1)"]
["AT5G23220","brown","Involved in the biochemical conversion of nicotinamide (NAM) to nicotinic acid (NA) in the salvage pathway of NAD biosynthesis. Involved in drought stress response.","NICOTINAMIDASE 3 (NIC3)","NICOTINAMIDASE 3 (NIC3)"]
["AT2G23420","brown","nicotinate phosphoribosyltransferase 2;(source:Araport11)","NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2 (NAPRT2)","NICOTINATE PHOSPHORIBOSYLTRANSFERASE 2 (NAPRT2)"]
["AT3G02680","brown","DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and MRE11","NIJMEGEN BREAKAGE SYNDROME 1 (NBS1)","NIJMEGEN BREAKAGE SYNDROME 1 (NBS1); (ATNBS1)"]
["AT3G44310","brown","Mutants are resistant to indole-3-acetonitrile (IAN). NIT1 catalyzes the terminal activation step in indole-acetic acid biosynthesis. Predominantly expressed isoform of nitrilase isoenzyme family. Aggregation of NIT1 in cells directly abutting wound sites is one of the earliest events associated with wound and herbicide-induced cell death. The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. It is also involved in the conversion of IAN to IAM (indole-3-acetamide) and other non-auxin-related metabolic processes. The mRNA is cell-to-cell mobile.","NITRILASE 1 (NIT1)","NITRILASE 1 (NIT1);A. THALIANA NITRILASE 1 (ATNIT1); (NITI)"]
["AT5G56750","brown","AGB1/AGG dimmer interacting protein, response to water deficit.","N-MYC DOWNREGULATED-LIKE 1 (NDL1)","N-MYC DOWNREGULATED-LIKE 1 (NDL1)"]
["AT3G54360","brown","Encodes a catalase chaperon that is essential for catalase activity. Required for multiple stress responses.","NO CATALASE ACTIVITY 1 (NCA1)","NO CATALASE ACTIVITY 1 (NCA1)"]
["AT1G03900","brown","member of NAP family, an heterogeneous subfamily of the ATP-binding Cassette (ABC) superfamily of membrane transporters. The NAPs proteins are characterized by having only one nucleotide-binding folds (NBFs) domain.","ATP-BINDING CASSETTE I18 (ABCI18)","NON-INTRINSIC ABC PROTEIN 4 (ATNAP4);NON-INTRINSIC ABC PROTEIN 4 (NAP4);ATP-BINDING CASSETTE I18 (ABCI18)"]
["AT3G10670","brown","Plastidic SufC-like ATP-binding cassette/ATPase essential for Arabidopsis embryogenesis. Involved in the biogenesis and/or repair of oxidatively damaged Fe?S clusters. Expressed in embryos and meristems.","NON-INTRINSIC ABC PROTEIN 7 (NAP7)","NON-INTRINSIC ABC PROTEIN 7 (ATNAP7);NON-INTRINSIC ABC PROTEIN 7 (NAP7);ATP-BINDING CASSETTE I6 (ABCI6)"]
["AT1G08550","brown","Violaxanthin deepoxidase involved in xanthophyll cycle.Two major consequences of the npq1 mutation are the absence of zeaxanthin formation in strong light and the partial inhibition of the quenching of singlet excited chlorophylls in the photosystem II light-harvesting complex","NON-PHOTOCHEMICAL QUENCHING 1 (NPQ1)","NON-PHOTOCHEMICAL QUENCHING 1 (NPQ1);ARABIDOPSIS VIOLAXANTHIN DE-EPOXIDASE 1 (AVDE1)"]
["AT3G13440","brown","Encodes a HemK class glutamine&#8208;methyltransferase that is involved in the termination of translation and essential for iron homeostasis.","NON-RESPONSE TO FE-DEFICIENCY1 (NRF1)","NON-RESPONSE TO FE-DEFICIENCY1 (NRF1)"]
["AT2G26870","brown","Non-specific phospholipase C2 involved in gametophyte development.","NON-SPECIFIC PHOSPHOLIPASE C2 (NPC2)","NON-SPECIFIC PHOSPHOLIPASE C2 (NPC2)"]
["AT5G13780","brown","Encodes the catalytic subunit of a N-terminal acetyltransferase.","N-TERMINAL ACETYLTRANSFERASE 10 (NAA10)","N-TERMINAL ACETYLTRANSFERASE 10 (NAA10)"]
["AT1G52980","brown","Encodes a GTPase that belongs to the subfamily of YlqF/YawG GTPases. Functions in Pre-60S ribosomal subunit maturation. The mRNA is cell-to-cell mobile.","NUCLEAR/NUCLEOLAR GTPASE 2 (AtNug2)","NUCLEAR/NUCLEOLAR GTPASE 2 (AtNug2);NUCLEAR/NUCLEOLAR GTPASE 2 (Nug2)"]
["AT5G23140","brown","One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). This mitochondrial CLPP2 assists coordination and homeostasis of respiratory complexes.","NUCLEAR-ENCODED CLP PROTEASE P7 (NCLPP7)","NUCLEAR-ENCODED CLP PROTEASE P7 (NCLPP7); (CLPP2)"]
["AT1G14860","brown","nudix hydrolase homolog 18;(source:Araport11)","NUDIX HYDROLASE HOMOLOG 18 (NUDT18)","NUDIX HYDROLASE HOMOLOG 18 (atnudt18);NUDIX HYDROLASE HOMOLOG 18 (NUDT18)"]
["AT5G06340","brown","RNA-decapping activity; cleaves almost all types of capped RNA at a tenfold lower concentration than other NUDT enzymes.","NUDIX HYDROLASE HOMOLOG 27 (NUDX27)","NUDIX HYDROLASE HOMOLOG 27 (ATNUDX27); (NUDT27);NUDIX HYDROLASE HOMOLOG 27 (NUDX27)"]
["AT2G43750","brown","Arabidopsis thaliana O-acetylserine (thiol) lyase (OAS-TL) isoform oasB, the key enzyme for fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. Required for pollen tube growth and/or fertilization.","O-ACETYLSERINE (THIOL) LYASE B (OASB)","O-ACETYLSERINE (THIOL) LYASE B (OASB);ARABIDOPSIS CYSTEINE SYNTHASE 1 (ACS1);CHLOROPLAST O-ACETYLSERINE SULFHYDRYLASE 1 (CPACS1);ARABIDOPSIS THALIANA CYSTEIN SYNTHASE-B (ATCS-B)"]
["AT4G33760","brown","Aminoacyl tRNA synthetase functions in SAM maintenance.","OKINA KUKI (OKI1)","OKINA KUKI (OKI1)"]
["AT1G34380","brown","5-3 exonuclease family protein;(source:Araport11)","ORGANELLAR EXONUCLEASE 2 (OEX2)","ORGANELLAR EXONUCLEASE 2 (OEX2)"]
["AT5G44785","brown","Organellar Single-stranded DNA Binding protein. Decreases MMEJ on long ssDNA templates.","ORGANELLAR SINGLE-STRANDED DNA BINDING PROTEIN 3 (OSB3)","ORGANELLAR SINGLE-STRANDED DNA BINDING PROTEIN 3 (OSB3)"]
["AT2G15820","brown","Encodes a protein that promotes splicing of type II introns. otp51 mutants fail to splice intron 2 of plastid ycf3 transcripts, a factor required for the assembly of Photosystem I. Therefore, homozygous otp51 mutants have profound photosynthetic defects and can only survive in sucrose-supplemented in vitro cultures under low light conditions. OTP51 may also be involved in splicing several other transcripts and precursor forms of the trnL, trnG, trnI, and trnA transcripts also accumulate in otp51 mutants. Although OTP51 shares some homology with DNA endonucleases, it lacks key catalytic residues suggesting that it does not participate in DNA cleavage.","ORGANELLE TRANSCRIPT PROCESSING 51 (OTP51)","ORGANELLE TRANSCRIPT PROCESSING 51 (OTP51)"]
["AT3G63370","brown","Encodes a chloroplast RNA editing factor.","ORGANELLE TRANSCRIPT PROCESSING 86 (OTP86)","ORGANELLE TRANSCRIPT PROCESSING 86 (OTP86)"]
["AT1G75330","brown","ornithine carbamoyltransferase;(source:Araport11)","ORNITHINE CARBAMOYLTRANSFERASE (OTC)","ORNITHINE CARBAMOYLTRANSFERASE (OTC)"]
["AT1G66050","brown","Encodes a protein that is similar to VIM1 but is not involved in cytosine methylation. This protein has an N-terminal PHD domain and two RING domains surrounding an SRA domain. ORTH5/VIM2 has E3 ubiquitin ligase activity in vitro.","VARIANT IN METHYLATION 2 (VIM2)","ORTHRUS 5 (ORTH5);VARIANT IN METHYLATION 2 (VIM2)"]
["AT3G63160","brown","Member of the Arabidopsis 7-kDa OEP family. Tail-anchored (TA) membrane protein which possesses a single C-terminal transmembrane domain targeting post-translationally to plastids.","OUTER ENVELOPE PROTEIN 6 (OEP6)","OUTER ENVELOPE PROTEIN 6 (OEP6);OUTER ENVELOPE PROTEIN 7.2 (OEP7.2)"]
["AT5G11270","brown","Encodes a homeodomain transcription factor involved in mediating resistance to infection by necrotrophic pathogens dependent on perception of jasmonic acid through COI1. Expressed in the nucleus. Downregulated upon fungal infection. Also involved in drought tolerance.","OVEREXPRESSOR OF CATIONIC PEROXIDASE 3 (OCP3)","OVEREXPRESSOR OF CATIONIC PEROXIDASE 3 (OCP3)"]
["AT3G55400","brown","methionyl-tRNA synthetase / methionine-tRNA ligase / MetRS (cpMetRS);(source:Araport11)","OVULE ABORTION 1 (OVA1)","OVULE ABORTION 1 (OVA1)"]
["AT5G49030","brown","tRNA synthetase class I (I, L, M and V) family protein;(source:Araport11)","OVULE ABORTION 2 (OVA2)","OVULE ABORTION 2 (OVA2)"]
["AT5G52520","brown","Encodes a chloroplast and mitochondria localized prolyl-tRNA synthetase.","OVULE ABORTION 6 (OVA6)","OVULE ABORTION 6 (OVA6); (ATPRORS-ORG);PROLYL-TRNA SYNTHETASE ORGANELLAR (PRORS-ORG);PROLYL-TRNA SYNTHETASE 1 (PRORS1)"]
["AT4G34070","brown","Calcium-binding EF-hand family protein;(source:Araport11)","OXIDATION RESISTANCE 6 (OXR6)","OXIDATION RESISTANCE 6 (OXR6)"]
["AT1G22530","brown","PATLs belong to a family of proteins having a Golgi dynamics (GOLD) domain in tandem with the Sec14p-like domain. PATLs are auxin regulated. Quadruple mutants (patl2456) show altered PIN1 lateralization in root endodermis cells.","PATELLIN 2 (PATL2)","PATELLIN 2 (PATL2)"]
["AT5G01020","brown","Protein kinase superfamily protein;(source:Araport11)","PBS1-LIKE8 (PBL8)","PBS1-LIKE8 (PBL8)"]
["AT1G59870","brown","ATP binding cassette transporter. Localized to the plasma membrane in uninfected cells. In infected leaves, the protein concentrated at infection sites. Contributes to nonhost resistance to inappropriate pathogens that enter by direct penetration in a salicylic acid?dependent manner. Required for mlo resistance. Has Cd transporter activity (Cd2+ extrusion pump) and contributes to heavy metal resistance. The mRNA is cell-to-cell mobile.","PENETRATION 3 (PEN3)","PENETRATION 3 (PEN3);PLEIOTROPIC DRUG RESISTANCE 8 (PDR8);ARABIDOPSIS PLEIOTROPIC DRUG RESISTANCE 8 (ATPDR8);ATP-BINDING CASSETTE G36 (ABCG36);ARABIDOPSIS THALIANA ATP-BINDING CASSETTE G36 (ATABCG36)"]
["AT1G61870","brown","Generic translation factor involved in mitochondrial translation.","PENTATRICOPEPTIDE REPEAT 336 (PPR336)","PENTATRICOPEPTIDE REPEAT 336 (PPR336);RIBOSOMAL PPR PROTEIN 1 (RPPR1);RIBOSOMAL PROTEIN MS76 (MS76)"]
["AT2G35130","brown","PPR protein involved in plastid mRNA splicing.","PENTATRICOPEPTIDE REPEAT 66 (PPR_66)","PENTATRICOPEPTIDE REPEAT 66 (PPR_66);PENTATRICOPEPTIDE REPEAT 66 (ATPPR66L)"]
["AT5G14660","brown","Encodes a peptide deformylase PDF1B. The crystal structure has been determined at a resolution of 0.24 nm (Biochem J, 2008, vol 413:417-427).","PEPTIDE DEFORMYLASE 1B (PDF1B)","PEPTIDE DEFORMYLASE 1B (PDF1B); (ATDEF2); (DEF2)"]
["AT3G47430","brown","member of the peroxin11 (PEX11) gene family, located on the peroxisome membrane, controls peroxisome proliferation. The mRNA is cell-to-cell mobile.","PEROXIN 11B (PEX11B)","PEROXIN 11B (PEX11B)"]
["AT3G20280","brown","Encodes a specific subunit of MINU1/2-associated SWI/SNF (MAS) complexes (PMID: 36189880,PMID:36471048).","ONE PHD FINGERS 2 (OPF2)","PHD DOMAIN-CONTAINING MAS SUBUNIT 1B (PMS1B);ONE PHD FINGERS 2 (OPF2)"]
["AT5G58690","brown","phosphatidylinositol-speciwc phospholipase C5;(source:Araport11)","PHOSPHATIDYLINOSITOL-SPECIWC PHOSPHOLIPASE C5 (PLC5)","PHOSPHATIDYLINOSITOL-SPECIWC PHOSPHOLIPASE C5 (PLC5); (ATPLC5)"]
["AT1G12580","brown","phosphoenolpyruvate carboxylase-related kinase 1;(source:Araport11)","PHOSPHOENOLPYRUVATE CARBOXYLASE-RELATED KINASE 1 (PEPKR1)","PHOSPHOENOLPYRUVATE CARBOXYLASE-RELATED KINASE 1 (PEPKR1)"]
["AT5G56630","brown","phosphofructokinase 7;(source:Araport11)","PHOSPHOFRUCTOKINASE 7 (PFK7)","PHOSPHOFRUCTOKINASE 7 (PFK7)"]
["AT4G34200","brown","Encodes a 3-phosphoglycerate dehydrogenase that is essential for embryo and pollen development.","EMBRYO SAC DEVELOPMENT ARREST 9 (EDA9)","PHOSPHOGLYCERATE DEHYDROGENASE 1 (PGDH1);EMBRYO SAC DEVELOPMENT ARREST 9 (EDA9)"]
["AT3G47390","brown","Encodes a protein that is believed to function as a pyrimidine reductase involved in riboflavin and FAD biosynthesis. phs1 was identified as a photosensitive mutant that shows reduced growth, chloroplast developmental abnormalities, reduced chlorophyll levels, increased oxidative stress, reduced NADPH/NADP+ ratios, reduced photosystem I electron transport, and reduced photosynthetic protein levels under high light conditions. Many of these abnormal phenotypes likely arise from the reduction in the levels of FAD in the phs1 mutant.","PHOTOSENSITIVE 1 (PHS1)","PHOTOSENSITIVE 1 (PHS1);PYRIMIDINE REDUCTASE (PYRR)"]
["AT4G19100","brown","Protein of unknown function (DUF3464) involved in photosystem II assembly.","PHOTOSYNTHESIS AFFECTED MUTANT 68 (PAM68)","PHOTOSYNTHESIS AFFECTED MUTANT 68 (PAM68)"]
["AT5G35840","brown","Encodes the apoprotein of phytochrome;one of a family of photoreceptors that modulate plant growth and development. The mRNA is cell-to-cell mobile.","PHYTOCHROME C (PHYC)","PHYTOCHROME C (PHYC)"]
["AT3G59060","brown","Encodes a novel Myc-related bHLH transcription factor, which physically associated with APRR1/TOC1 and is a member of PIF3 transcription factor family. Involved in shade avoidance. Functions as negative regulator of PhyB. Protein levels are modulated by phytochrome B. Controls the resistance to B. cinerea in a COI1- and EIN2-dependent manner.","PHYTOCHROME INTERACTING FACTOR 3-LIKE 6 (PIL6)","PHYTOCHROME INTERACTING FACTOR 3-LIKE 6 (PIL6);PHYTOCHROME-INTERACTING FACTOR 5 (PIF5); (BHLHB1); (A-PUT2)"]
["AT4G38160","brown","Encodes a member of the mitochondrial transcription termination factor family. MTERF6 is localized to both the mitochondria and chloroplast. It is required for ILE tRNA maturation during chloroplast development. Loss of function of MTERF6 results in plants with defective chloroplasts or reduced rate of photosynthesis when MTERF6 expression is low.","PIGMENT DEFECTIVE 191 (pde191)","PIGMENT DEFECTIVE 191 (pde191);MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR 6 (MTERF6)"]
["AT3G03710","brown","Encodes a chloroplast polynucleotide phosphorylase (PNPase). Involved in response to phosphorus (P) starvation. Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings.","RESISTANT TO INHIBITION WITH FSM 10 (RIF10)","PIGMENT DEFECTIVE 326 (PDE326);POLYNUCLEOTIDE PHOSPHORYLASE (PNP); (ATKH10);RESISTANT TO INHIBITION WITH FSM 10 (RIF10)"]
["AT4G30720","brown","Encodes a putative oxidoreductase/electron carrier detected in the chloroplast stroma that is essential to ensure a correct electron flow through the photosynthetic chain and, hence, photosynthesis efficiency and normal growth. Mutations in the Col-0 allele result in pale green pigmentation and defective growth.","PIGMENT DEFECTIVE 327 (PDE327)","PIGMENT DEFECTIVE 327 (PDE327)"]
["AT3G55250","brown","Encodes a nucleus-encoded protein, Photosystem I Assembly 3 (PSA3), that is required for PSI accumulation.","PIGMENT DEFECTIVE 329 (PDE329)","PIGMENT DEFECTIVE 329 (PDE329);PHOTOSYSTEM I ASSEMBLY 3 (PSA3)"]
["AT2G01420","brown","Encodes a putative auxin efflux carrier that is localized in developing and mature root meristems. It is involved in the maintenance of embryonic auxin gradients. A role for AtPIN4 in generating a sink for auxin below the quiescent center of the root meristem that is essential for auxin distribution and patterning is proposed. In the root, PIN4 is detected around the quiescent center and cells surrounding it, and localizes basally in provascular cells. PIN4 expression is upregulated in brassinosteroid-insensitive mutant (PMID 16141452).","PIN-FORMED 4 (PIN4)","PIN-FORMED 4 (PIN4)"]
["AT3G58670","brown","Plant Cysteine Oxidase (PCO). Involved in controlling the stability of Group VII ethylene response factors (ERF-VIIs) via N-Arg/degron pathway through catalyzing the oxidation of their N-Cys for subsequent Arginyl-tRNA--protein transferase 1 (ATE1) mediated arginine installation.","PLANT CYSTEINE OXIDASE 5 (PCO5)","PLANT CYSTEINE OXIDASE 5 (PCO5)"]
["AT2G17440","brown","Encodes PIRL5, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction. The mRNA is cell-to-cell mobile.","PLANT INTRACELLULAR RAS GROUP-RELATED LRR 5 (PIRL5)","PLANT INTRACELLULAR RAS GROUP-RELATED LRR 5 (PIRL5)"]
["AT1G60190","brown","Encodes PUB19, a plant U-box armadillo repeat protein. Involved in salt inhibition of germination together with PUB18. The mRNA is cell-to-cell mobile.","PLANT U-BOX 19 (PUB19)","PLANT U-BOX 19 (PUB19); (AtPUB19)"]
["AT3G17750","brown","Encodes a member of a plant-specific subgroup in the DYRK (dual-specificity tyrosine phosphorylation-regulated kinase) family.","PLANT-SPECIFIC DUAL-SPECIFICITY TYROSINE PHOSPHORYLATION-REGULATED KINASE 1 (DYRKP-1)","PLANT-SPECIFIC DUAL-SPECIFICITY TYROSINE PHOSPHORYLATION-REGULATED KINASE 1 (DYRKP-1)"]
["AT3G18680","brown","Encodes a functional UMP Kinase located in the plastid that binds to group II intron plastid transcription products. Mutants show decreased accumulation of target transcripts/proteins.","PLASTID 55 UMP KINASE (PUMPKIN)","PLASTID 55 UMP KINASE (PUMPKIN)"]
["AT4G33520","brown","Encodes a putative metal-transporting P-type ATPase PAA1. An alternative-splicing event of the PAA1 pre-mRNA produces a copper chaperon named PCH1. The mRNA is cell-to-cell mobile.","P-TYPE ATP-ASE 1 (PAA1)","PLASTID CHAPERON 1 (PCH1);P-TYPE ATP-ASE 1 (PAA1);HEAVY METAL ASSOCIATED PROTEIN 38 (ATHMP38);HEAVY METAL ATPASE 6 (HMA6);ARABIDOPSIS THALIANA HEAVY METAL ATPASE 6 (AtHMAC6)"]
["AT1G42550","brown","Encodes a plant-specific protein of unknown function that appears to be conserved among angiosperms. The mRNA is cell-to-cell mobile.","PLASTID MOVEMENT IMPAIRED1 (PMI1)","PLASTID MOVEMENT IMPAIRED1 (PMI1)"]
["AT1G06730","brown","Encodes a plastid nucleoside kinase that is involved in inosine salvage and control of purine nucleotide biosynthesis.","PLASTID NUCLEOSIDE KINASE 1 (PNK1)","PLASTID NUCLEOSIDE KINASE 1 (PNK1)"]
["AT1G10522","brown","Encodes PRIN2 (plastid redox insensitive 2). PRIN2 mutants are impaired in PEP (plastid-encoded RNA polymerase) activity and high light-dependent plastid redox signalling to the nucleus.","PLASTID REDOX INSENSITIVE 2 (PRIN2)","PLASTID REDOX INSENSITIVE 2 (PRIN2)"]
["AT3G13120","brown","Ribosomal protein S10p/S20e family protein;(source:Araport11)","PLASTID RIBOSOMAL PROTEIN OF THE 30S SUBUNIT 10 (PRPS10)","PLASTID RIBOSOMAL PROTEIN OF THE 30S SUBUNIT 10 (PRPS10);RIBOSOMAL PROTEIN US10C (US10C)"]
["AT1G64510","brown","Translation elongation factor EF1B/ribosomal protein S6 family protein;(source:Araport11)","PLASTID RIBOSOMAL PROTEIN OF THE 30S SUBUNIT 6 (PRPS6)","PLASTID RIBOSOMAL PROTEIN OF THE 30S SUBUNIT 6 (PRPS6);RIBOSOMAL PROTEIN BS6C (BS6C)"]
["AT2G43030","brown","Ribosomal protein L3 family protein;(source:Araport11)","PLASTID RIBOSOMAL PROTEINS OF THE 50S SUBUNIT (PRPL3)","PLASTID RIBOSOMAL PROTEINS OF THE 50S SUBUNIT (PRPL3);RIBOSOMAL PROTEIN UL3C (UL3C)"]
["AT4G01310","brown","Ribosomal L5P family protein;(source:Araport11)","PLASTID RIBOSOMAL PROTEINS OF THE 50S SUBUNIT 5 (PRPL5)","PLASTID RIBOSOMAL PROTEINS OF THE 50S SUBUNIT 5 (PRPL5);RIBOSOMAL PROTEIN UL5C (UL5C)"]
["AT2G34640","brown","Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression. Interacts with PAP7 and PAP12 in the nucleus.","PLASTID TRANSCRIPTIONALLY ACTIVE 12 (PTAC12)","PLASTID TRANSCRIPTIONALLY ACTIVE 12 (PTAC12);HEMERA (HMR); (TAC12);PEP-ASSOCIATED PROTEIN 5 (PAP5)"]
["AT3G09210","brown","plastid transcriptionally active 13;(source:Araport11)","PLASTID TRANSCRIPTIONALLY ACTIVE 13 (PTAC13)","PLASTID TRANSCRIPTIONALLY ACTIVE 13 (PTAC13)"]
["AT4G20130","brown","PEP complex component. Interacts with PAP5 and PAP12 in the nucleus.","PLASTID TRANSCRIPTIONALLY ACTIVE 14 (PTAC14)","PLASTID TRANSCRIPTIONALLY ACTIVE 14 (PTAC14); (TAC14);PEP-ASSOCIATED PROTEIN 7 (PAP7)"]
["AT1G80480","brown","plastid transcriptionally active 17;(source:Araport11)","PLASTID TRANSCRIPTIONALLY ACTIVE 17 (PTAC17)","PLASTID TRANSCRIPTIONALLY ACTIVE 17 (PTAC17)"]
["AT2G32180","brown","plastid transcriptionally active 18;(source:Araport11)","PLASTID TRANSCRIPTIONALLY ACTIVE 18 (PTAC18)","PLASTID TRANSCRIPTIONALLY ACTIVE 18 (PTAC18)"]
["AT1G74850","brown","Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression. PEP complex component.","PLASTID TRANSCRIPTIONALLY ACTIVE 2 (PTAC2)","PLASTID TRANSCRIPTIONALLY ACTIVE 2 (PTAC2);PIGMENT DEFECTIVE 343 (PDE343)"]
["AT3G04260","brown","PEP complex component.","PLASTID TRANSCRIPTIONALLY ACTIVE 3 (PTAC3)","PLASTID TRANSCRIPTIONALLY ACTIVE 3 (PTAC3);PIGMENT DEFECTIVE 324 (PDE324)"]
["AT1G65260","brown","Encodes a protein required for thylakoid membrane formation.","PLASTID TRANSCRIPTIONALLY ACTIVE 4 (PTAC4)","PLASTID TRANSCRIPTIONALLY ACTIVE 4 (PTAC4); (IM30);VESICLE-INDUCING PROTEIN IN PLASTIDS 1 (VIPP1)"]
["AT3G52150","brown","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)","PLASTID-SPECI&#64257;C RIBOSOMAL PROTEIN 2 (PSRP2)","PLASTID-SPECI&#64257;C RIBOSOMAL PROTEIN 2 (PSRP2); (CP29C);RIBOSOMAL PROTEIN CS22 (CS22)"]
["AT1G01780","brown","Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization. The mRNA is cell-to-cell mobile.","PLIM2B (PLIM2b)","PLIM2B (PLIM2b)"]
["AT3G16850","brown","Pectin lyase-like superfamily protein;(source:Araport11)","POLYGALACTURONASE CLADE F 5 (PGF5)","POLYGALACTURONASE CLADE F 5 (PGF5)"]
["AT5G51100","brown","Fe superoxide dismutase whose mRNA levels are increased in response to exposure to UV-B; ROS-scavenging gene.","FE SUPEROXIDE DISMUTASE 2 (FSD2)","POLYMERASE-ASSOCIATED PROTEIN 9 (PAP9);FE SUPEROXIDE DISMUTASE 2 (FSD2)"]
["AT1G43190","brown","polypyrimidine tract-binding protein 3;(source:Araport11)","POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 (PTB3)","POLYPYRIMIDINE TRACT-BINDING PROTEIN 3 (PTB3)"]
["AT3G15840","brown","Encodes a chloroplast-targeted protein localized in the stroma that is a novel component essential for NDH-mediated non-photochemical reduction of the plastoquinone pool in chlororespiratory electron transport.","POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE (PIFI)","POST-ILLUMINATION CHLOROPHYLL FLUORESCENCE INCREASE (PIFI)"]
["AT5G55260","brown","Encodes a protein with similarity to the catalytic subunit of the mammalian PPX protein phospatase.","PROTEIN PHOSPHATASE X 2 (PPX2)","PP4 CATALYTIC (PP4C) SUBUNIT 2 (PP4-2);PROTEIN PHOSPHATASE X -2 (PPX-2);PROTEIN PHOSPHATASE X 2 (PPX2)"]
["AT5G23290","brown","prefoldin 5;(source:Araport11)","PREFOLDIN 5 (PFD5)","PREFOLDIN 5 (PFD5)"]
["AT1G49630","brown","Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed in flower, leaf and root. Not expressed in silique and shoot.","PRESEQUENCE PROTEASE 2 (PREP2)","PRESEQUENCE PROTEASE 2 (ATPREP2);PRESEQUENCE PROTEASE 2 (PREP2)"]
["AT1G03860","brown","prohibitin 2","PROHIBITIN 2 (PHB2)","PROHIBITIN 2 (ATPHB2);PROHIBITIN 2 (PHB2)"]
["AT2G20530","brown","prohibitin 6;(source:Araport11)","PROHIBITIN 6 (PHB6)","PROHIBITIN 6 (ATPHB6);PROHIBITIN 6 (PHB6)"]
["AT3G55740","brown","Encodes a proline transporter with affinity for gly betaine, proline, and GABA. Protein is expressed most highly in the roots.","PROLINE TRANSPORTER 2 (PROT2)","PROLINE TRANSPORTER 2 (PROT2);PROLINE TRANSPORTER 2 (ATPROT2)"]
["AT3G61540","brown","prolyl aminopeptidase","PROLYL AMINOPEPTIDASE 2 (PAP2)","PROLYL AMINOPEPTIDASE 2 (PAP2)"]
["AT1G20380","brown","Putative prolyl oligopeptidase, associated with quantitive disease resistance to S. sclerotiorum.","PROLYL-OLIGOPEPTIDASE ASSOCIATED WITH QUANTITATIVE RESISTANCE (POQR)","PROLYL-OLIGOPEPTIDASE ASSOCIATED WITH QUANTITATIVE RESISTANCE (POQR)"]
["AT1G59830","brown","Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].","PROTEIN PHOSPHATASE 2A-1 (PP2A-1)","PROTEIN PHOSPHATASE 2A-1 (PP2A-1)"]
["AT1G10430","brown","Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4]. It regulates the activation of ADF/cofilin, which, in turn, regulates actin cytoskeleton remodeling and is involved in phot2-mediated chloroplast avoidance movements.","PROTEIN PHOSPHATASE 2A-2 (PP2A-2)","PROTEIN PHOSPHATASE 2A-2 (PP2A-2)"]
["AT4G26720","brown","Encodes catalytic subunit of protein phosphatase X. Expressed at very low levels in A. thaliana flowers, leaves, stems and roots.","PROTEIN PHOSPHATASE X 1 (PPX1)","PROTEIN PHOSPHATASE X-1 (PPX-1);PP4 CATALYTIC (PP4C) SUBUNIT 1 (PP4-1);HIGH CROSSOVER RATE1 (HCR1);PROTEIN PHOSPHATASE X 1 (PPX1)"]
["AT2G32230","brown","Encodes a protein-only RNase P that is involved in the 5? cleavage of the precursor tRNAs and is able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. Mutants show a drastic reduction in the levels of mature plastid tRNA-Phe(GAA) and tRNA-Arg(ACG), limiting plastid gene expression.","PROTEINACEOUS RNASE P 1 (PRORP1)","PROTEINACEOUS RNASE P 1 (PRORP1)"]
["AT3G21110","brown","5'-phosphoribosyl-4-(N-succinocarboxamide)-5-aminoimidazole synthetase (PUR7, syn. SAICAR synthetase), catalyzes aspartate addition at the alpha-amino group to the growing purine backbone.","PURIN 7 (PUR7)","PURIN 7 (PUR7);PURIN C (PURC); (ATPURC)"]
["AT1G09830","brown","glycinamide ribonucleotide synthetase (GAR synthetase) that catalyzes the conversion of phosphoribosyl amine to phosphoribosyl glycineamide","PURINE BIOSYNTHESIS 2 (PUR2)","PURINE BIOSYNTHESIS 2 (PUR2)"]
["AT5G14800","brown","Delta 1-pyrroline-5-carboxylate reductase, catalyzes the final step in proline biosynthesis from glutamate and ornithine.In situ hybridization indicated that under normal growth conditions, the highest concentration of P5CR transcripts occurs in the cortical parenchyma, phloem, vascular cambium and pith parenchyma in the vicinity of the protoxylem. Single gene in Arabidopsis.","PYRROLINE-5- CARBOXYLATE (P5C) REDUCTASE (P5CR)","PYRROLINE-5- CARBOXYLATE (P5C) REDUCTASE (P5CR);PYRROLINE-5- CARBOXYLATE (P5C) REDUCTASE (AT-P5R); (AT-P5C1);EMBRYO DEFECTIVE 2772 (EMB2772)"]
["AT5G09240","brown","ssDNA-binding transcriptional regulator;(source:Araport11)",null,"QIAN SHOU KINASE1 (QSK1)"]
["AT5G19320","brown","Encodes RAN GTPase activating protein 2. The protein is localized to the nuclear envelope during interphase.","RAN GTPASE ACTIVATING PROTEIN 2 (RANGAP2)","RAN GTPASE ACTIVATING PROTEIN 2 (RANGAP2)"]
["AT2G36305","brown","Encodes an endoprotease involved in the cleavage of prenylated CaaX-box proteins. In vitro, it can cleave a farnesylated tetrapeptide and it can promote membrane-localization of a farnesylated GFP:AtROP9 protein when both are expressed in yeast.","FARNESYLATED PROTEIN-CONVERTING ENZYME 2 (FACE2)","RAS-CONVERTING ENZYME 1 (RCE1);RAS-CONVERTING ENZYME 1 (ATRCE1);FARNESYLATED PROTEIN-CONVERTING ENZYME 2 (FACE2);ARABIDOPSIS THALIANA FARNESYLATED PROTEIN-CONVERTING ENZYME-2 (ATFACE-2)"]
["AT3G10140","brown","Encodes a gene involved in plant mitochondrial recombination surveillance. Disruption of this gene in combination with a mutation in MSH1 results in extensive rearrangement of the mitochondrial genome and dramatic changes in plant growth.","RECA HOMOLOG 3 (RECA3)","RECA HOMOLOG 3 (RECA3)"]
["AT1G58602","brown","LRR and NB-ARC domains-containing disease resistance protein;(source:Araport11)","RECOGNITION OF PERONOSPORA PARASITICA 7 (RPP7)","RECOGNITION OF PERONOSPORA PARASITICA 7 (RPP7)"]
["AT1G01320","brown","Encodes REDUCED CHLOROPLAST COVERAGE 1 (REC1) a protein with similarity to the FLOURY locus in maize. Located in the nucleus and cytosol. Contributes to establishing the size of the chloroplast compartment.","REDUCED CHLOROPLAST COVERAGE (REC1)","REDUCED CHLOROPLAST COVERAGE (REC1);FLOURY ENDOSPERM LIKE 2 (FLL2)"]
["AT4G28080","brown","Encodes REDUCED CHLOROPLAST COVERAGE 2 (REC2). Along with REC1 and REC3 it contributes to establishing the size of the chloroplast compartment.","REDUCED CHLOROPLAST COVERAGE 2 (REC2)","REDUCED CHLOROPLAST COVERAGE 2 (REC2)"]
["AT1G25260","brown","Involved in male gamete development. Trans-acting factor in the assembly of the pre-60S particle; affects ribosome gene expression.","REDUCED POLLEN NUMBER (RDP)","REDUCED POLLEN NUMBER (RDP);REDUCED POLLEN NUMBER 1 (RDP1)"]
["AT1G09950","brown","RESPONSE TO ABA AND SALT 1;(source:Araport11)","RESPONSE TO ABA AND SALT 1 (RAS1)","RESPONSE TO ABA AND SALT 1 (RAS1)"]
["AT1G14920","brown","Similar to a putative transcription factor and transcriptional coactivators. Repressor of GA responses and involved in gibberellic acid mediated signaling. Member of the DELLA proteins that restrain the cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. GAI may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA.","GIBBERELLIC ACID INSENSITIVE (GAI)","RESTORATION ON GROWTH ON AMMONIA 2 (RGA2);GIBBERELLIC ACID INSENSITIVE (GAI)"]
["AT5G12470","brown","UvrABC system C protein, putative (DUF3411);(source:Araport11)","RETICULATA-RELATED 4 (RER4)","RETICULATA-RELATED 4 (RER4)"]
["AT2G45060","brown","alanine-tRNA ligase;(source:Araport11)",null,"RGS1 AND HXK1 INTERACTING PROTEIN 1 (RHIP1)"]
["AT2G21790","brown","encodes large subunit of ribonucleotide reductase involved in the production of deoxyribonucleoside triphosphates (dNTPs) for DNA replication and repair","RIBONUCLEOTIDE REDUCTASE 1 (RNR1)","RIBONUCLEOTIDE REDUCTASE 1 (R1);RIBONUCLEOTIDE REDUCTASE 1 (RNR1);CRINKLY LEAVES 8 (CLS8);RIBONUCLEOTIDE REDUCTASE LARGE SUBUNIT 1 (ATRNR1);DEFECTIVE IN POLLEN ORGANELLE DNA DEGRADATION 2 (DPD2)"]
["AT4G17560","brown","Ribosomal protein L19 family protein;(source:Araport11)","RIBOSOMAL PROTEIN BL19CZ (BL19CZ)","RIBOSOMAL PROTEIN BL19CZ (BL19CZ)"]
["AT4G30930","brown","Encodes a ribosomal RPL21M protein that is localized to the mitochondrion and is involved in karyogamy during female gametophyte development and fertilization. Mutants display defects in both male and female gametophyte development (i.e.collapsed pollen and female gametophytes with unfused central cells).","NUCLEAR FUSION DEFECTIVE 1 (NFD1)","RIBOSOMAL PROTEIN BL21M (BL21M);NUCLEAR FUSION DEFECTIVE 1 (NFD1)"]
["AT2G16930","brown","Ribosomal protein L27 family protein;(source:Araport11)","RIBOSOMAL PROTEIN BL27M (BL27M)","RIBOSOMAL PROTEIN BL27M (BL27M)"]
["AT3G14600","brown","Ribosomal protein L18ae/LX family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL20X (EL20X)","RIBOSOMAL PROTEIN EL20X (EL20X)"]
["AT1G74270","brown","Ribosomal protein L35Ae family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL33Y (EL33Y)","RIBOSOMAL PROTEIN EL33Y (EL33Y)"]
["AT3G27850","brown","50S ribosomal protein L12-C The mRNA is cell-to-cell mobile.","RIBOSOMAL PROTEIN L12-C (RPL12-C)","RIBOSOMAL PROTEIN L12-C (RPL12-C);RIBOSOMAL PROTEIN BL12CX (BL12CX)"]
["AT1G73940","brown","tumor necrosis factor receptor family protein;(source:Araport11)","RIBOSOMAL PROTEIN ML106 (ML106)","RIBOSOMAL PROTEIN ML106 (ML106)"]
["AT1G16870","brown","mitochondrial 28S ribosomal protein S29-like protein;(source:Araport11)","RIBOSOMAL PROTEIN MS29 (MS29)","RIBOSOMAL PROTEIN MS29 (MS29)"]
["AT5G26800","brown","xaa-pro aminopeptidase P;(source:Araport11)","RIBOSOMAL PROTEIN MS88 (MS88)","RIBOSOMAL PROTEIN MS88 (MS88)"]
["AT5G30510","brown","ribosomal protein S1;(source:Araport11)","RIBOSOMAL PROTEIN S1 (RPS1)","RIBOSOMAL PROTEIN S1 (RPS1);RIBOSOMAL PROTEIN BS1C (BS1C);PLASTID RIBOSOMAL PROTEIN S1 (PRPS1); (ARRPS1)"]
["AT3G49080","brown","Mitochondrial ribosomal protein, similar to RPS9 from E.coli. Loss of function results in gametophyte lethality, particularly the megagametophyte.","RIBOSOMAL PROTEIN S9 M (RPS9M)","RIBOSOMAL PROTEIN S9 M (RPS9M);RIBOSOMAL PROTEIN US9M (US9M)"]
["AT3G11250","brown","Ribosomal protein L10 family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL10X (UL10X)","RIBOSOMAL PROTEIN UL10X (UL10X)"]
["AT1G78630","brown","Ribosomal protein L13 family protein;(source:Araport11)","EMBRYO DEFECTIVE 1473 (emb1473)","RIBOSOMAL PROTEIN UL13C (UL13C);EMBRYO DEFECTIVE 1473 (emb1473)"]
["ATCG00790","brown","chloroplast gene encoding a ribosomal protein L16, which is a constituent of 50S large ribosomal subunit","RIBOSOMAL PROTEIN L16 (RPL16)","RIBOSOMAL PROTEIN UL16C (UL16C);RIBOSOMAL PROTEIN L16 (RPL16)"]
["AT5G65220","brown","Ribosomal L29 family protein;(source:Araport11)","PLASTID RIBOSOMAL PROTEINS OF THE 50S SUBUNIT 29 (PRPL29)","RIBOSOMAL PROTEIN UL29C (UL29C);PLASTID RIBOSOMAL PROTEINS OF THE 50S SUBUNIT 29 (PRPL29)"]
["AT2G18400","brown","ribosomal protein L6 family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL6M (UL6M)","RIBOSOMAL PROTEIN UL6M (UL6M)"]
["AT1G80620","brown","S15/NS1, RNA-binding protein;(source:Araport11)","RIBOSOMAL PROTEIN US15MY (US15MY)","RIBOSOMAL PROTEIN US15MY (US15MY)"]
["AT1G64880","brown","Ribosomal protein S5 family protein;(source:Araport11)","RIBOSOMAL PROTEIN US5M (US5M)","RIBOSOMAL PROTEIN US5M (US5M)"]
["AT3G04230","brown","Ribosomal protein S5 domain 2-like superfamily protein;(source:Araport11)","RIBOSOMAL PROTEIN US9Y (US9Y)","RIBOSOMAL PROTEIN US9Y (US9Y)"]
["AT5G13430","brown","Rieske FeS protein.Ubiquinol-cytochrome C reductase iron-sulfur subunit;(source:Araport11)","RIESKE FES PROTEIN (RISP)","RIESKE FES PROTEIN (RISP)"]
["AT3G01540","brown","RNA HELICASE DRH1","DEAD BOX RNA HELICASE 1 (DRH1)","RNA HELICASE 14 (RH14);DEAD BOX RNA HELICASE 1 (DRH1);NVOLVED IN RRNA PROCESSING 6 (IRP6);ARABIDOPSIS THALIANA DEAD BOX RNA HELICASE 1 (ATDRH1)"]
["AT2G45810","brown","Immunoprecipitation with mRNA decapping complex members DCP1 and DCP2.","RNA HELICASE 6 (RH6)","RNA HELICASE 6 (RH6)"]
["ATCG00190","brown","Chloroplast DNA-dependent RNA polymerase B subunit. The transcription of this gene is regulated by a nuclear encoded RNA polymerase. This gene has been transferred to mitochondrial genome during crucifer evolution.","RNA POLYMERASE SUBUNIT BETA (RPOB)","RNA POLYMERASE SUBUNIT BETA (RPOB)"]
["AT2G36990","brown","Encodes a general sigma factor in chloroplasts and is probably responsible for the recognition of sigma 70 type standard bacteria-type multi-subunit RNA polymerase (PEP) promoters in young cotyledons. It is a substrate for regulatory phosphorylation by cpCK2, a nuclear-coded plastid-targeted casein kinase 2, that has been implicated as a key component in plant sigma factor phosphorylation and transcriptional regulation.","RNAPOLYMERASE SIGMA-SUBUNIT F (SIGF)","RNAPOLYMERASE SIGMA-SUBUNIT F (SIGF);SIGMA FACTOR 6 (SIG6);SIGMA FACTOR 6 (ATSIG6); (SOLDAT8)"]
["AT5G19280","brown","kinase associated protein phosphatase composed of three domains: an amino-terminal signal anchor, a kinase interaction (KI) domain, and a type 2C protein phosphatase catalytic region","KINASE ASSOCIATED PROTEIN PHOSPHATASE (KAPP)","ROOT ATTENUATED GROWTH 1 (RAG1);KINASE ASSOCIATED PROTEIN PHOSPHATASE (KAPP)"]
["AT3G49180","brown","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)","ROOT INITIATION DEFECTIVE 3 (RID3)","ROOT INITIATION DEFECTIVE 3 (RID3)"]
["AT5G02010","brown","Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. Involved in cell wall patterning. Encodes ROP activator, regulates the formation of ROP-activated domains; these in turn determine the pattern of cell wall pits. Required for periodic formation of secondary cell wall pits.","ROP (RHO OF PLANTS) GUANINE NUCLEOTIDE EXCHANGE FACTOR 7 (ROPGEF7)","ROP (RHO OF PLANTS) GUANINE NUCLEOTIDE EXCHANGE FACTOR 7 (ROPGEF7); (ATROPGEF7)"]
["AT3G56070","brown","rotamase cyclophilin 2 (ROC2) exhibiting peptidyl-prolyl cis-trans isomerase activity involved in signal transduction.","ROTAMASE CYCLOPHILIN 2 (ROC2)","ROTAMASE CYCLOPHILIN 2 (ROC2)"]
["AT3G62030","brown","nuclear-encoded chloroplast stromal cyclophilin CYP20-3 (also known as ROC4). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","ROTAMASE CYP 4 (ROC4)","ROTAMASE CYP 4 (ROC4);CYCLOPHILIN 20-3 (CYP20-3)"]
["AT1G61580","brown","R-protein L3 B;(source:Araport11)","R-PROTEIN L3 B (RPL3B)","R-PROTEIN L3 B (RPL3B);RIBOSOMAL PROTEIN UL3Y (UL3Y);ARABIDOPSIS RIBOSOMAL PROTEIN 2 (ARP2)"]
["AT5G08280","brown","Encodes a protein with porphobilinogen deaminase activity. This protein is targeted to the chloroplast. Mutants spontaneously develop chlorotic leaf lesions in the absence of pathogen attack, resembling the phenotype of lesion-mimic mutants. It has been shown to interact with the PPR protein AtECB2 for chloroplast RNA editing.","HYDROXYMETHYLBILANE SYNTHASE (HEMC)","RUGOSA 1 (RUG1);HYDROXYMETHYLBILANE SYNTHASE (HEMC)"]
["AT5G14260","brown","Suppresses singlet oxygen-induced stress responses by protecting grana margins.","SAFEGUARD1 (SAFE1)","SAFEGUARD1 (SAFE1)"]
["AT2G33800","brown","Encodes SCABRA1 (SCA1), a nuclear gene encoding a plastid-type ribosomal protein that functions &#8232;as a structural component of the 70S plastid ribosome. The sca1-rps5 allele exhibits defects in plastid 16SrRNA processing and a resulting decrease in accumulation of photosynthetic proteins. Loss-of-function mutations enhance the polarity defects of the as2 mutants.","SCABRA 1 (SCA1)","SCABRA 1 (SCA1);EMBRYO DEFECTIVE 3113 (EMB3113);PLASTID RIBOSOMAL PROTEIN OF THE 30S SUBUNIT 5 (PRPS5);RIBOSOMAL PROTEIN US5C (US5C);RIBOSOMAL PROTEIN S5 (RPS5)"]
["AT1G03230","brown","Eukaryotic aspartyl protease family protein;(source:Araport11)","SECRETED ASPARTIC PROTEASE 1 (SAP1)","SECRETED ASPARTIC PROTEASE 1 (SAP1)"]
["AT1G03220","brown","Eukaryotic aspartyl protease family protein;(source:Araport11)","SECRETED ASPARTIC PROTEASE 2 (SAP2)","SECRETED ASPARTIC PROTEASE 2 (SAP2)"]
["AT2G18710","brown","Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid.","SECY HOMOLOG 1 (SCY1)","SECY HOMOLOG 1 (SCY1)"]
["AT1G66580","brown","senescence associated gene 24;(source:Araport11)","SENESCENCE ASSOCIATED GENE 24 (SAG24)","SENESCENCE ASSOCIATED GENE 24 (SAG24);RIBOSOMAL PROTEIN UL16X (UL16X);RIBOSOMAL PROTEIN L10 C (RPL10C)"]
["AT3G53030","brown","Encodes a protein kinase SRPK4 that specifically targets Arabidopsis Ser/Arg-rich (SR) slicing factors involved in RNA metabolism. In vitro kinase assay showed that SRPK4 phosphorylates the SR protein RSp31.","SER/ARG-RICH PROTEIN KINASE 4 (SRPK4)","SER/ARG-RICH PROTEIN KINASE 4 (SRPK4)"]
["AT3G13110","brown","Encodes a mitochondrial serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.","SERINE ACETYLTRANSFERASE 2;2 (SERAT2;2)","SERINE ACETYLTRANSFERASE 2;2 (ATSERAT2;2);SERINE ACETYLTRANSFERASE-1 (SAT-1);SERINE ACETYLTRANSFERASE A (SAT-A);SERINE ACETYLTRANSFERASE 3 (SAT3);SERINE ACETYLTRANSFERASE-MITOCHONDRIAL (SAT-M);SERINE ACETYLTRANSFERASE 2;2 (SERAT2;2)"]
["AT1G15000","brown","serine carboxypeptidase-like 50;(source:Araport11)","SERINE CARBOXYPEPTIDASE-LIKE 50 (scpl50)","SERINE CARBOXYPEPTIDASE-LIKE 50 (scpl50)"]
["AT3G19220","brown","Encodes a zinc finger protein that is similar to a subgroup of DnaJ and is involved in cotyledon chloroplast biogenesis. Cyo1 is localized to the thylakoid membrane and has protein disulfide isomerase activity in vivo.Cyo1 is more highly expressed in light grown seedlings. Loss of function mutants have albino cotyledons and abnormal plastids.","SNOWY COTYLEDON 2 (SCO2)","SHI-YO-U MEANS COTYLEDON IN JAPANESE (CYO1);SNOWY COTYLEDON 2 (SCO2)"]
["AT5G55130","brown","putative molybdopterin synthase sulphurylase (cnx5)","CO-FACTOR FOR NITRATE, REDUCTASE AND XANTHINE DEHYDROGENASE 5 (CNX5)","SIRTINOL RESISTANT 1 (SIR1);CO-FACTOR FOR NITRATE, REDUCTASE AND XANTHINE DEHYDROGENASE 5 (CNX5)"]
["AT2G21950","brown","Encodes an SKP1 interacting partner (SKIP6).","SKP1 INTERACTING PARTNER 6 (SKIP6)","SKP1 INTERACTING PARTNER 6 (SKIP6)"]
["AT3G18420","brown","Protein prenylyltransferase superfamily protein;(source:Araport11)","SLOW GREEN 1 (SG1)","SLOW GREEN 1 (SG1)"]
["AT2G22410","brown","SLOW GROWTH 1;(source:Araport11)","SLOW GROWTH 1 (SLO1)","SLOW GROWTH 1 (SLO1)"]
["AT5G25800","brown","Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11)","SMALL RNA DEGRADING NUCLEASE 5 (SDN5)","SMALL RNA DEGRADING NUCLEASE 5 (SDN5)"]
["AT4G34620","brown","Encodes ribosomal protein S16, has embryo-defective lethal mutant phenotype","SMALL SUBUNIT RIBOSOMAL PROTEIN 16 (SSR16)","SMALL SUBUNIT RIBOSOMAL PROTEIN 16 (SSR16)"]
["AT3G50500","brown","encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Enzyme involved in the ABA signaling during seed germination, dormancy and seedling growth.","SNF1-RELATED PROTEIN KINASE 2.2 (SNRK2.2)","SNF1-RELATED PROTEIN KINASE 2.2 (SNRK2.2)"]
["AT5G57630","brown","CBL-interacting protein kinase.When mutated plants are hypersensitive to salt and osmotic stress.","CBL-INTERACTING PROTEIN KINASE 21 (CIPK21)","SNF1-RELATED PROTEIN KINASE 3.4 (SnRK3.4);CBL-INTERACTING PROTEIN KINASE 21 (CIPK21)"]
["AT4G30960","brown","Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance. The mRNA is cell-to-cell mobile.","SOS3-INTERACTING PROTEIN 3 (SIP3)","SOS3-INTERACTING PROTEIN 3 (SIP3);CBL-INTERACTING PROTEIN KINASE 6 (ATCIPK6);SNF1-RELATED PROTEIN KINASE 3.14 (SNRK3.14);CBL-INTERACTING PROTEIN KINASE 6 (CIPK6)"]
["AT1G23820","brown","Spermidine synthase.","SPERMIDINE SYNTHASE 1 (SPDS1)","SPERMIDINE SYNTHASE 1 (SPDS1)"]
["AT1G70310","brown","Spermidine synthase.","SPERMIDINE SYNTHASE 2 (SPDS2)","SPERMIDINE SYNTHASE 2 (SPDS2)"]
["AT5G50670","brown","Together with SPL13B involved in floral transition. Expression reduced by Verticillium dahliae SRNAs which affects the plant's miR157d which targets SPL13A and B.","SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13B (SPL13B)","SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13 (SPL13);SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13B (SPL13B)"]
["AT5G50570","brown","Together with SPL13B involved in floral transition. Expression reduced by Verticillium dahliae SRNAs which affects the plant's miR157d which targets SPL13A and B.","SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13A (SPL13A)","SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13A (SPL13A);SQUAMOSA PROMOTER-BINDING PROTEIN LIKE 13 (SPL13)"]
["AT4G30950","brown","Chloroplastic enzyme responsible for the synthesis of 16:2 and 18:2 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene mutation resulted in reduced level of unsaturated fatty acids leading to susceptibility to photoinhibition.","FATTY ACID DESATURASE 6 (FAD6)","STEAROYL DESATURASE DEFICIENCY 4 (SFD4);FATTY ACID DESATURASE 6 (FAD6);FATTY ACID DESATURASE C (FADC)"]
["AT1G31970","brown","DEA(D/H)-box RNA helicase family protein;(source:Araport11)","STRESS RESPONSE SUPPRESSOR 1 (STRS1)","STRESS RESPONSE SUPPRESSOR 1 (STRS1); (RH5)"]
["AT5G67360","brown","Encodes a subtilisin-like serine protease essential for mucilage release from seed coats.","(ARA12)","SUBTILISIN-LIKE SERINE PROTEASE 1.7 (SBT1.7); (ARA12)"]
["AT5G23310","brown","Fe superoxide dismutase","FE SUPEROXIDE DISMUTASE 3 (FSD3)","SUPEROXIDE DISMUTASE 3 (SOD3);FE SUPEROXIDE DISMUTASE 3 (FSD3)"]
["AT1G22620","brown","SAC domain phosphoinositide (3,5)P2 phosphatase. Colocalized with a Golgi Marker. Required for normal cell morphogenesis, cell wall synthesis, and actin organization.","SUPPRESSOR OF ACTIN 1 (SAC1)","SUPPRESSOR OF ACTIN 1 (ATSAC1);SUPPRESSOR OF ACTIN 1 (SAC1)"]
["AT5G20840","brown","Phosphoinositide phosphatase family protein;(source:Araport11)","SUPPRESSOR OF ACTIN 4 (SAC4)","SUPPRESSOR OF ACTIN 4 (SAC4)"]
["AT1G76500","brown","Encodes an AT hook domain containing protein. Identified in a screen of activation tagged lines that suppress the long-hypocotyl phenotype of a weak phyB allele. Affects cell elongation in the hypocotyl and leaves.Acts redundantly with ESC to modulate hypocotyl growth inhibition in response to light","AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 (AHL29)","SUPPRESSOR OF PHYB-4#3 (SOB3);AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 29 (AHL29)"]
["AT5G46580","brown","PPR protein with 5'exonuclease activity that is involved in chloroplast rRNA processing.","SUPPRESSOR OF THYLAKOID FORMATION 1 (SOT1)","SUPPRESSOR OF THYLAKOID FORMATION 1 (SOT1)"]
["AT5G13650","brown","Encodes SVR3, a putative chloroplast TypA translation elongation GTPase. Loss of SVR3 suppresses variegation mediated by var2. SVR3 is essential for plants? ability to develop functional chloroplasts under chilling stress (8C), but not at normal temperature (22C).","SUPPRESSOR OF VARIEGATION 3 (SVR3)","SUPPRESSOR OF VARIEGATION 3 (SVR3)"]
["AT4G16390","brown","Encodes a pentatricopeptide repeat protein, SVR7 (SUPPRESSOR OF VARIEGATION7), required for FtsH-mediated chloroplast biogenesis. It is involved in accumulation and translation of chloroplast ATP synthase subunits.","SUPPRESSOR OF VARIEGATION 7 (SVR7)","SUPPRESSOR OF VARIEGATION 7 (SVR7)"]
["AT1G73720","brown","Encodes SMU1, a protein involved in RNA splicing.","SUPPRESSORS OF MEC-8 AND UNC-52 1 (SMU1)","SUPPRESSORS OF MEC-8 AND UNC-52 1 (SMU1)"]
["AT1G67140","brown","HEAT repeat-containing protein;(source:Araport11)","SWEETIE (SWEETIE)","SWEETIE (SWEETIE)"]
["AT2G33610","brown","Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Identified as a specific subunit of MINU1/2-associated SWI/SNF (MAS) complexes (PMID:36471048).Interacts with BSH, AtSWI3A, SWI3C and FCA. Expressed ubiquitously.","SWITCH SUBUNIT 3 (SWI3B)","SWITCH SUBUNIT 3 (ATSWI3B);CHROMATIN REMODELING COMPLEX SUBUNIT B (CHB2);SWITCH SUBUNIT 3 (SWI3B)"]
["AT1G50300","brown","TBP-associated factor 15;(source:Araport11)","TBP-ASSOCIATED FACTOR 15 (TAF15)","TBP-ASSOCIATED FACTOR 15 (TAF15)"]
["AT3G20050","brown","Encodes a putative cytoplasmic chaperonin that is similar to mouse Tcp-1 (t complex polypeptide 1).","T-COMPLEX PROTEIN 1 ALPHA SUBUNIT (TCP-1)","T-COMPLEX PROTEIN 1 ALPHA SUBUNIT (ATTCP-1);T-COMPLEX PROTEIN 1 ALPHA SUBUNIT (TCP-1);CHAPERONIN CONTAINING T-COMPLEX POLYPEPTIDE-1 SUBUNIT 1 (CCT1)"]
["AT5G60970","brown","TCP gene involved in heterochronic control of leaf differentiation. Transcription factor which controls thermomorphogenesis by positively regulating PIF4 activity.","TEOSINTE BRANCHED 1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 5 (TCP5)","TEOSINTE BRANCHED 1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 5 (TCP5)"]
["AT2G46280","brown","Encodes a homolog of mammalian TGF-beta receptor interacting protein. Co-immunoprecipitates with BRI1 and can be phosphorylated in vitro by BRI1 at specific sites (Thr-14, Thr-89, and either Thr-197 or Ser-198). May therefore be a cytoplasmic BRI1 substrate and involved in brassinosteroid regulated plant growth and development.The encoded protein has two DWD motifs. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase","TGF-BETA RECEPTOR INTERACTING PROTEIN 1 (TRIP-1)","TGF-BETA RECEPTOR INTERACTING PROTEIN 1 (TRIP-1); (TIF3I1); (TRIP1)"]
["AT5G40090","brown","Disease resistance protein (TIR-NBS class);(source:Araport11)","CHS1-LIKE 1 (CHL1)","TIR-NBS18 (TN18);CHS1-LIKE 1 (CHL1)"]
["AT1G72850","brown","Disease resistance protein (TIR-NBS class);(source:Araport11)","TIR-NBS4 (TN4)","TIR-NBS4 (TN4)"]
["AT3G60740","brown","Encodes tubulin-folding cofactor D. Mutants arrest during embryogenesis with embryos that are small, mushroom-shaped ('pilz') and consist of only one or few large cells each containing one or more variably enlarged nuclei and often cell wall stubs. Gene product necessary for continuous microtubule organization.","TITAN 1 (TTN1)","TITAN 1 (TTN1);EMBRYO DEFECTIVE 133 (EMB133);TUBULIN FOLDING COFACTOR D (TFC D);CHAMPIGNON (CHO)"]
["AT4G35300","brown","tonoplast monosaccharide transporter2;(source:Araport11)","TONOPLAST MONOSACCHARIDE TRANSPORTER2 (TMT2)","TONOPLAST SUGAR TRANSPORTER2 (TST2);TONOPLAST MONOSACCHARIDE TRANSPORTER2 (TMT2)"]
["AT2G41630","brown","Encodes a transcription factor, TFIIB1, that plays important roles in pollen tube growth, guidance, and reception as well as endosperm development and is partially functionally different from AtTFIIB2 and AtTFIIB3/AtpBRP2.","TRANSCRIPTION FACTOR IIB 1 (TFIIB1)","TRANSCRIPTION FACTOR IIB 1 (TFIIB1); (ATTFIIB1);TRANSCRIPTION FACTOR IIB (TFIIB)"]
["AT3G27080","brown","Component of the TOM complex involved in transport of nuclear-encoded mitochondrial proteins","TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3 (TOM20-3)","TRANSLOCASE OF OUTER MEMBRANE 20 KDA SUBUNIT 3 (TOM20-3)"]
["AT1G64220","brown","translocase of outer membrane 7 kDa subunit 2;(source:Araport11)","TRANSLOCASE OF OUTER MEMBRANE 7 KDA SUBUNIT 2 (TOM7-2)","TRANSLOCASE OF OUTER MEMBRANE 7 KDA SUBUNIT 2 (TOM7-2)"]
["AT5G22640","brown","EMB1211 is a MORN (multiple membrane occupation and recognition nexus) motif containing protein involved in embryo development and chloroplast biogenesis. The mRNA is cell-to-cell mobile.","EMBRYO DEFECTIVE 1211 (emb1211)","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 100 (TIC100);EMBRYO DEFECTIVE 1211 (emb1211)"]
["AT1G02280","brown","Encodes a GTP-binding GTP-ase. Component of the chloroplast protein import machinery. Required for import of POR B into plastids. Toc33 phosphorylation may not play an important role in vivo.","TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 33 (TOC33)","TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 33 (TOC33);PLASTID PROTEIN IMPORT 1 (PPI1); (ATTOC33)"]
["AT3G46740","brown","Component of the translocon outer membrane (TOC) complex. Forms the outer envelope translocation channel (beta-barrel). Plays a role in preprotein conductance. Imported into chloroplast. Expressed in young dividing photosynthetic tissues. Knockout mutants are embryo lethal with arrested development at the two-cell stage. Knockout mutants have abnormal etioplasts.","TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 75-III (TOC75-III)","TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 75-III (TOC75-III);MODIFIER OF ARG1 1 (MAR1); (TOC75); (1-Mar)"]
["AT2G16950","brown","TRN1 is an importin beta protein that functions as a nuclear import receptor for AtGRP7 and in interacts with AGO1 to affect miRNA loading.","TRANSPORTIN 1 (TRN1)","TRANSPORTIN 1 (TRN1);TRANSPORTIN 1 (ATTRN1); (IMB2)"]
["AT3G13180","brown","NOL1/NOP2/sun family protein / antitermination NusB domain-containing protein;(source:Araport11)","TRNA METHYLTRANSFERASE 4E (TRM4E)","TRNA METHYLTRANSFERASE 4E (TRM4E); (ATTRM4E)"]
["AT1G36310","brown","T-RNA methyltransferase involved in wobble uridine modifications.","TRNA METHYLTRANSFERASE 9 (TRM9)","TRNA METHYLTRANSFERASE 9 (TRM9);ARABIDOPSIS THALIANA TRNA METHYLTRANSFERASE 9 (AtTRM9)"]
["AT2G04530","brown","Encodes a protein with RNAse Z activity suggesting a role in tRNA processing. Protein contains a signal sequence for import into the chloroplast.","(CPZ)","TRNASE Z 2 (TRZ2); (CPZ)"]
["AT5G06690","brown","Encodes a thioredoxin (WCRKC1) localized in chloroplast stroma. Contains a WCRKC motif. Functions in redox cascade with 2CPA and 2CPB via the ferredoxin-thioredoxin reductase (FTR)/thioredoxin (Trx) pathway to mediate the light-responsive reductive control of target proteins. Oxidizes redox-regulated proteins.","WCRKC THIOREDOXIN 1 (WCRKC1)","TRX-LIKE 2.1 (TrxL2.1);WCRKC THIOREDOXIN 1 (WCRKC1)"]
["AT5G54810","brown","A.thaliana tryptophan synthase beta subunit (trpB)","TRYPTOPHAN SYNTHASE BETA-SUBUNIT 1 (TSB1)","TRYPTOPHAN SYNTHASE BETA-SUBUNIT 1 (TSB1); (ATTSB1);TRYPTOPHAN BIOSYNTHESIS 2 (TRP2);TRYPTOPHAN BIOSYNTHESIS B (TRPB)"]
["AT1G14610","brown","Required for proper proliferation of basal cells.","TWIN 2 (TWN2)","TWIN 2 (TWN2);VALYL TRNA SYNTHETASE (VALRS)"]
["AT5G28750","brown","Small, dynamic subunit of the Tat-system that is believed to be the active component during target protein translocation. The twin-arginine translocase (Tat)system mediates the transport of already-folded proteins across membranes.","TWIN-ARGININE TRANSLOCATION A (TATA)","TWIN-ARGININE TRANSLOCATION A (TATA)"]
["AT3G21640","brown","encodes a 42 kDa FK506-binding protein (AtFKBP42) that possesses similarity to multidomain peptidyl-prolyl cis/trans isomerases (PPIases, EC 5.2.1.8), which are known to be components of mammalian steroid hormone receptor complexes. The protein appears to be localized to the plasma membrane by electron microscopy and binds to HSP90.1 and calmodulin in vitro. It also aggregates citrate synthase in vitro but does NOT show PPIase activity in vivo. Mutants are reduced in size and exhibit disoriented growth in all organs. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","TWISTED DWARF 1 (TWD1)","TWISTED DWARF 1 (TWD1);ULTRACURVATA 2 (UCU2);FK506-BINDING PROTEIN 42 (FKBP42); (ATFKBP42)"]
["AT5G34930","brown","Plastid localized arogenate dehydrogenase involved in tyrosine biosynthesis. Contains two similar catalytic domains. Lacks prephenate dehydrogenase activity.","TYRA AROGENATE DEHYDROGENASE1 (TYRA1)","TYRA AROGENATE DEHYDROGENASE1 (TYRA1)"]
["AT1G09760","brown","U2 small nuclear ribonucleoprotein A;(source:Araport11)","U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A (U2A')","U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A (U2A')"]
["AT1G77310","brown","wound-responsive family protein;(source:Araport11)","UBINUCLEIN 2 (UBN2)","UBINUCLEIN 2 (UBN2)"]
["AT1G64230","brown","ubiquitin-conjugating enzyme 28;(source:Araport11)","UBIQUITIN-CONJUGATING ENZYME 28 (UBC28)","UBIQUITIN-CONJUGATING ENZYME 28 (UBC28)"]
["AT3G14400","brown","Encodes a ubiquitin-specific protease.","UBIQUITIN-SPECIFIC PROTEASE 25 (UBP25)","UBIQUITIN-SPECIFIC PROTEASE 25 (UBP25)"]
["AT3G21280","brown","Encodes a ubiquitin-specific protease.","UBIQUITIN-SPECIFIC PROTEASE 7 (UBP7)","UBIQUITIN-SPECIFIC PROTEASE 7 (UBP7)"]
["AT2G36800","brown","Encodes a DON-Glucosyltransferase. The UGT73C5 glucosylates both brassinolide and castasterone in the 23-O position. The enzyme is presumably involved in the homeostasis of those steroid hormones hence regulating BR activity. Transgenic plants overexpressing UGT73C5 show a typical BR-deficient phenotype.","DON-GLUCOSYLTRANSFERASE 1 (DOGT1)","UDP-GLUCOSYL TRANSFERASE 73C5 (UGT73C5);DON-GLUCOSYLTRANSFERASE 1 (DOGT1)"]
["AT1G22360","brown","UDP-glucosyl transferase 85A2;(source:Araport11)","UDP-GLUCOSYL TRANSFERASE 85A2 (UGT85A2)","UDP-GLUCOSYL TRANSFERASE 85A2 (AtUGT85A2);UDP-GLUCOSYL TRANSFERASE 85A2 (UGT85A2)"]
["AT3G16520","brown","UDP-glucosyl transferase 88A1;(source:Araport11)","UDP-GLUCOSYL TRANSFERASE 88A1 (UGT88A1)","UDP-GLUCOSYL TRANSFERASE 88A1 (UGT88A1)"]
["AT3G18630","brown","Encodes a uracil-DNA glycosylase (UDG) involved in a base excision DNA repair pathway in mitochondria.","URACIL DNA GLYCOSYLASE (UNG)","URACIL DNA GLYCOSYLASE (ATUNG);URACIL DNA GLYCOSYLASE (UNG)"]
["AT1G67550","brown","Encodes a nickel-containing urea hydrolase involved in nitrogen recycling. It requires three urease accessory proteins for its activation. The mRNA is cell-to-cell mobile.","UREASE (URE)","UREASE (URE)"]
["AT2G35035","brown","Encodes a urease accessory protein which is essential for the activation of plant urease.","UREASE ACCESSORY PROTEIN D (URED)","UREASE ACCESSORY PROTEIN D (URED)"]
["AT3G53210","brown","nodulin MtN21-like transporter family protein","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 6 (UMAMIT6)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 6 (UMAMIT6)"]
["AT3G28715","brown","Vacuolar-type H + -ATPase (V-ATPase) is a multisubunit proton pump located on the endomembranes, which plays an important role in plant growth. VHA-d2 is one of the two subunit isoforms. Plays a role in response to oxidative stress by affecting H+ flux and AHA gene expression.","V-ATPASE D2 SUBUNIT (VHA-D2)","V-ATPASE D2 SUBUNIT (VHA-D2)"]
["AT4G15780","brown","SNARE protein member of VAMP72 Gene Family; TGN/PM localized. Involved in autophagy, possibly in the process of formation of autophagic vesicles.","VESICLE-ASSOCIATED MEMBRANE PROTEIN 724 (VAMP724)","VESICLE-ASSOCIATED MEMBRANE PROTEIN 724 (ATVAMP724);VESICLE-ASSOCIATED MEMBRANE PROTEIN 724 (VAMP724)"]
["AT2G31190","brown","Encodes RUS2 (root UVB sensitive2), a DUF647-containing protein that is homologous to the RUS1 protein. RUS2 works with RUS1 in a root UV-B sensing pathway that plays a vital role in Arabidopsis early seedling morphogenesis and development. Required for auxin polar transport.","ROOT UV-B SENSITIVE 2 (RUS2)","WEAK AUXIN RESPONSE1 (WXR1);ROOT UV-B SENSITIVE 2 (RUS2)"]
["AT2G38470","brown","Member of the plant WRKY transcription factor family. Regulates the antagonistic relationship between defense pathways mediating responses to P. syringae and necrotrophic fungal pathogens. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress. Regulates cytochrome P450 gene CYP94B1 to control apoplastic barrier formation in roots to confer salt tolerance.","WRKY DNA-BINDING PROTEIN 33 (WRKY33)","WRKY DNA-BINDING PROTEIN 33 (WRKY33);WRKY DNA-BINDING PROTEIN 33 (ATWRKY33)"]
["AT1G06620","cyan","encodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase The mRNA is cell-to-cell mobile."]
["AT4G28440","cyan","Nucleic acid-binding, OB-fold-like protein;(source:Araport11)"]
["AT5G16120","cyan","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT1G45170","cyan","outer envelope pore 24B-like protein;(source:Araport11)"]
["AT4G29270","cyan","HAD superfamily, subfamily IIIB acid phosphatase;(source:Araport11)"]
["AT2G44820","cyan","axoneme-associated protein MST101(2) protein;(source:Araport11)"]
["AT1G67870","cyan","glycine-rich protein;(source:Araport11)"]
["AT4G14620","cyan","DUF506 gene family member"]
["AT1G04900","cyan","NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185);(source:Araport11)"]
["AT5G23200","cyan","C5orf35;(source:Araport11)"]
["AT2G26810","cyan","Putative methyltransferase family protein;(source:Araport11)"]
["AT1G52000","cyan","Mannose-binding lectin superfamily protein;(source:Araport11)"]
["AT5G26260","cyan","TRAF-like family protein;(source:Araport11)"]
["AT1G48200","cyan","hypothetical protein;(source:Araport11)"]
["AT4G26095","cyan","Natural antisense transcript overlaps with AT4G26090;(source:Araport11)"]
["AT2G46420","cyan","helicase with zinc finger protein;(source:Araport11)"]
["AT5G47620","cyan","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT5G18800","cyan","Cox19-like CHCH family protein;(source:Araport11)"]
["AT3G04830","cyan","Protein prenylyltransferase superfamily protein;(source:Araport11)"]
["AT5G65575","cyan","Natural antisense transcript overlaps with AT5G65580;(source:Araport11)"]
["AT2G18876","cyan","Encodes a microtubule-associated protein."]
["AT3G18060","cyan","transducin family protein / WD-40 repeat family protein;(source:Araport11)"]
["AT1G28350","cyan","Nucleotidylyl transferase superfamily protein;(source:Araport11)"]
["AT5G36230","cyan","ARM repeat superfamily protein;(source:Araport11)"]
["AT2G23390","cyan","acyl-CoA;(source:Araport11)"]
["AT1G09640","cyan","Translation elongation factor EF1B, gamma chain;(source:Araport11)"]
["AT2G32430","cyan","Galactosyltransferase family protein;(source:Araport11)"]
["AT1G26100","cyan","Cytochrome b561/ferric reductase transmembrane protein family;(source:Araport11)"]
["AT3G52390","cyan","TatD related DNase;(source:Araport11)"]
["AT1G15120","cyan","Ubiquinol-cytochrome C reductase hinge protein;(source:Araport11)"]
["AT2G33250","cyan","transmembrane protein;(source:Araport11)"]
["AT4G26310","cyan","elongation factor P (EF-P) family protein;(source:Araport11)"]
["AT2G29020","cyan","Rab5-interacting family protein;(source:Araport11)"]
["AT4G30650","cyan","Low temperature and salt responsive protein family;(source:Araport11)"]
["AT2G25730","cyan","zinc finger FYVE domain protein;(source:Araport11)"]
["AT1G27210","cyan","ARM repeat superfamily protein;(source:Araport11)"]
["AT5G18920","cyan","Cox19-like CHCH family protein;(source:Araport11)"]
["AT2G35830","cyan","ureidoglycolate hydrolase;(source:Araport11)"]
["AT1G11780","cyan","oxidoreductase, 2OG-Fe(II) oxygenase family protein;(source:Araport11)"]
["AT1G10780","cyan","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT2G42780","cyan","transcription elongation factor B polypeptide;(source:Araport11)"]
["AT4G30450","cyan","glycine-rich protein;(source:Araport11)"]
["AT1G18090","cyan","5-3 exonuclease family protein;(source:Araport11)"]
["AT5G22340","cyan","NF-kappa-B inhibitor-like protein;(source:Araport11)"]
["AT2G41780","cyan","hypothetical protein;(source:Araport11)"]
["AT5G10130","cyan","Pollen Ole e 1 allergen and extensin family protein;(source:Araport11)"]
["AT1G26270","cyan","Phosphatidylinositol 3- and 4-kinase family protein;(source:Araport11)"]
["AT5G43440","cyan","encodes a protein whose sequence is similar to ACC oxidase"]
["AT4G16410","cyan","transmembrane protein;(source:Araport11)"]
["AT1G01800","cyan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT3G19515","cyan","apoptosis inhibitor;(source:Araport11)"]
["AT5G11450","cyan","PsbP domain protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein);(source:Araport11)"]
["AT2G33840","cyan","Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial;(source:Araport11)"]
["AT5G59740","cyan","UDP-N-acetylglucosamine (UAA) transporter family;(source:Araport11)"]
["AT4G05150","cyan","Octicosapeptide/Phox/Bem1p family protein;(source:Araport11)"]
["AT5G44520","cyan","NagB/RpiA/CoA transferase-like superfamily protein;(source:Araport11)"]
["AT3G11560","cyan","Membrane protein located in chloroplast."]
["AT3G17020","cyan","Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)"]
["AT3G61820","cyan","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT1G33810","cyan","zinc finger/BTB domain protein;(source:Araport11)"]
["AT1G03687","cyan","DTW domain-containing protein;(source:Araport11)"]
["AT1G70420","cyan","DNA ligase-like protein, putative (DUF1645);(source:Araport11)"]
["AT4G18380","cyan","F-box family protein;(source:Araport11)"]
["AT1G29630","cyan","5-3 exonuclease family protein;(source:Araport11)"]
["AT3G44620","cyan","protein-tyrosine phosphatase;(source:Araport11)"]
["AT2G44580","cyan","zinc ion binding protein;(source:Araport11)"]
["AT4G36760","cyan","Arabidopsis aminopeptidase P1The mRNA is cell-to-cell mobile."]
["AT1G67680","cyan","SRP72 RNA-binding domain-containing protein;(source:Araport11)"]
["AT2G01680","cyan","Ankyrin repeat family protein;(source:Araport11)"]
["AT5G19170","cyan","NEP-interacting protein, putative (DUF239);(source:Araport11)"]
["AT3G27997","cyan","pseudogene of expressed protein;(source:Araport11)"]
["AT2G33180","cyan","hypothetical protein;(source:Araport11)"]
["AT1G04240","cyan","SHY2/IAA3 regulates multiple auxin responses in roots. It is induced rapidly by IAA, and has been shown to be phosphorylated by oat phytochrome A in vitro."]
["AT1G53350","cyan","Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11)"]
["AT1G28090","cyan","Polynucleotide adenylyltransferase family protein;(source:Araport11)"]
["AT1G79510","cyan","hypothetical protein (DUF2358);(source:Araport11)"]
["AT5G38290","cyan","Peptidyl-tRNA hydrolase family protein;(source:Araport11)"]
["AT5G27390","cyan","tagatose-6-phosphate ketose/aldose isomerase, putative (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein);(source:Araport11)"]
["AT3G02820","cyan","zinc knuckle (CCHC-type) family protein;(source:Araport11)"]
["AT5G36790","cyan","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)"]
["AT5G45670","cyan","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates."]
["AT1G18265","cyan","zein-binding protein (Protein of unknown function, DUF593);(source:Araport11)"]
["AT1G47570","cyan","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G53250","cyan","histone-lysine N-methyltransferase, H3 lysine-79 specific-like protein;(source:Araport11)"]
["AT4G27860","cyan","vacuolar iron transporter (VIT) family protein;(source:Araport11)"]
["AT5G40920","cyan","pseudogene of Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11)"]
["AT1G10050","cyan","Encodes a putative glycosyl hydrolase family 10 protein (xylanase)."]
["AT3G17680","cyan","Kinase interacting (KIP1-like) family protein;(source:Araport11)"]
["AT3G30122","cyan","pseudogene similar to peptide chain release factor protein"]
["AT5G16060","cyan","Cytochrome c oxidase biogenesis protein Cmc1-like protein;(source:Araport11)"]
["AT4G36440","cyan","G-protein coupled receptor;(source:Araport11)"]
["AT2G42770","cyan","Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein;(source:Araport11)"]
["AT3G52155","cyan","Phosphoglycerate mutase family protein;(source:Araport11)"]
["AT5G23120","cyan","encodes a stability and/or assembly factor of photosystem IIThe mRNA is cell-to-cell mobile."]
["AT5G46450","cyan","Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11)"]
["AT2G20780","cyan","Major facilitator superfamily protein;(source:Araport11)"]
["AT1G79710","cyan","Major facilitator superfamily protein;(source:Araport11)"]
["AT1G06510","cyan","forkhead-associated domain protein;(source:Araport11)"]
["AT1G80130","cyan","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT4G24175","cyan","kinesin-like protein;(source:Araport11)"]
["AT1G72050","cyan","Encodes a transcriptional factor TFIIIA required for transcription of 5S rRNA gene. 5S rRNA is the smallest constituent of the ribosome. Work on one of the gene models AT1G72050.2 showed that it encodes a protein with nine Cys(2)-His(2)-type zinc fingers, a characteristic feature of TFIIIA proteins. AT1G72050.2 also contains a 23 amino acid spacer between fingers 1 and 2, a 66 amino acid spacer between fingers 4 and 5, and a 50 amino acid non-finger C-terminal tail. in vitro assay demonstrated that AT1g72050.2 binds to 5S rDNA and efficiently stimulates the transcription of 5S rRNA. AT1g72050.2 also binds to 5S rRNA in vitro. AT1g72050.2 is located at several nuclear foci including the nucleolus and is absent from the cytoplasm."]
["AT5G42765","cyan","plasma membrane fusion protein;(source:Araport11)"]
["AT3G23880","cyan","F-box and associated interaction domains-containing protein;(source:Araport11)"]
["AT1G55340","cyan","hypothetical protein (DUF1639);(source:Araport11)"]
["AT1G62600","cyan","Flavin-binding monooxygenase family protein;(source:Araport11)"]
["AT3G05690","cyan","Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues."]
["AT1G13000","cyan","transmembrane protein, putative (DUF707);(source:Araport11)"]
["AT5G03880","cyan","Thioredoxin family protein, located in chloroplast, change in response to H2O2."]
["AT4G34419","cyan","hypothetical protein;(source:Araport11)"]
["AT5G02370","cyan","ATP binding microtubule motor family protein;(source:Araport11)"]
["AT5G14450","cyan","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates."]
["AT1G66180","cyan","The gene encodes a putative aspartyl protease (ASP). Its expression is induced in response to light and ascorbate. The mRNA is cell-to-cell mobile."]
["AT3G18800","cyan","transmembrane protein;(source:Araport11)"]
["AT1G52100","cyan","Mannose-binding lectin superfamily protein;(source:Araport11)"]
["AT1G54500","cyan","RBD1 is a thylakoid membrane-bound iron-binding protein that is required for the proper assembly of photosystem II in Arabidopsis. It is found in all oxygenic photoautotrophic organisms (plants, algae and cyanobacteria)."]
["AT4G28900","cyan","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 7.7e-236 P-value blast match to GB:AAA57005 Hopscotch polyprotein (Ty1_Copia-element) (Zea mays);(source:TAIR10)"]
["AT4G27100","cyan","Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11)"]
["AT2G42960","cyan","Protein kinase superfamily protein;(source:Araport11)"]
["AT2G46600","cyan","Calcium-binding EF-hand family protein;(source:Araport11)"]
["AT4G39380","cyan","TSL-kinase interacting-like protein;(source:Araport11)"]
["AT1G11125","cyan","hypothetical protein;(source:Araport11)"]
["AT1G05140","cyan","Peptidase M50 family protein;(source:Araport11)"]
["AT3G10060","cyan","FKBP-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11)"]
["AT3G56010","cyan","transmembrane protein;(source:Araport11)"]
["AT4G12870","cyan","Gamma interferon responsive lysosomal thiol (GILT) reductase family protein;(source:Araport11)"]
["AT3G51720","cyan","WEB family protein (DUF827);(source:Araport11)"]
["AT2G41650","cyan","hypothetical protein;(source:Araport11)"]
["AT2G40290","cyan","Encodes an eIF2alpha homolog that can be phosphorylated by GCN2 in vitro."]
["AT3G61870","cyan","Membrane protein (ECM1) located in chloroplast."]
["AT2G40316","cyan","autophagy-like protein;(source:Araport11)"]
["AT4G38410","cyan","Dehydrin family protein;(source:Araport11)"]
["AT3G15354","cyan","Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA3 (and SPA4) predominantly regulates elongation growth in adult plants."]
["AT5G26280","cyan","TRAF-like family protein;(source:Araport11)"]
["AT1G72640","cyan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT4G09630","cyan","transmembrane protein (DUF616);(source:Araport11)"]
["AT1G27880","cyan","DEAD/DEAH box RNA helicase family protein;(source:Araport11)"]
["AT4G08690","cyan","Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11)"]
["AT1G73655","cyan","Peptidyl-prolyl cis-trans isomerase family protein; protein interaction with begomovirus movement proteins."]
["AT1G53070","cyan","Legume lectin family protein;(source:Araport11)"]
["AT1G27200","cyan","glycosyltransferase family protein (DUF23);(source:Araport11)"]
["AT2G41250","cyan","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)"]
["AT1G28370","cyan","encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole."]
["AT5G19210","cyan","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT5G07820","cyan","Plant calmodulin-binding protein-like protein;(source:Araport11)"]
["AT5G53045","cyan","transcription factor;(source:Araport11)"]
["AT5G48830","cyan","phosphoglycolate phosphatase;(source:Araport11)"]
["AT5G19760","cyan","Encodes a novel mitochondrial carrier capable of transporting both dicarboxylates (such as malate, oxaloacetate, oxoglutarate, and maleate) and tricarboxylates (such as citrate, isocitrate, cis-aconitate, and trans-aconitate)."]
["AT4G01590","cyan","DNA-directed RNA polymerase III subunit;(source:Araport11)"]
["AT3G23530","cyan","Cyclopropane-fatty-acyl-phospholipid synthase;(source:Araport11)"]
["AT1G12244","cyan","Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11)"]
["AT5G66290","cyan","hypothetical protein;(source:Araport11)"]
["AT5G47900","cyan","heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624);(source:Araport11)"]
["AT3G51870","cyan","Mitochondrial substrate carrier family protein;(source:Araport11)"]
["AT1G23170","cyan","Involved in cell wall modifications resulting in resistance to the biotroph Hpa."]
["AT3G05130","cyan","paramyosin-like protein;(source:Araport11)"]
["AT5G64010","cyan","U2 small nuclear ribonucleoprotein auxiliary factor-like protein;(source:Araport11)"]
["AT5G59690","cyan","Histone superfamily protein;(source:Araport11)"]
["AT5G45650","cyan","subtilase family protein;(source:Araport11)"]
["AT4G39950","cyan","Belongs to cytochrome P450 and is involved in tryptophan metabolism. Converts Trp to indo-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.The mRNA is cell-to-cell mobile."]
["AT1G63880","cyan","Encodes a TIR-NBS-LRR class of disease resistance protein effective against Leptosphaeria maculans. The mRNA is cell-to-cell mobile."]
["AT3G13360","cyan","Encodes an outer nuclear membrane protein that anchors RanGAP1 to the nuclear envelope. It interacts with SUN proteins and is required for maintaining the elongated nuclear shape of epidermal cells."]
["AT2G35810","cyan","ureidoglycolate hydrolase;(source:Araport11)"]
["AT1G04850","cyan","ubiquitin-associated (UBA)/TS-N domain-containing protein;(source:Araport11)"]
["AT5G02550","cyan","hypothetical protein;(source:Araport11)"]
["AT1G60010","cyan","PADRE protein down-regulated after infection by S. sclerotiorun."]
["AT1G14270","cyan","CAAX amino terminal protease family protein;(source:Araport11)"]
["AT5G24000","cyan","keratin-associated protein (DUF819);(source:Araport11)"]
["AT3G15240","cyan","Serine/threonine-protein kinase WNK (With No Lysine)-like protein;(source:Araport11)"]
["AT1G78060","cyan","Glycosyl hydrolase family protein;(source:Araport11)"]
["AT1G01860","cyan","dimethyladenosine transferase"]
["AT5G45490","cyan","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT5G02180","cyan","Transmembrane amino acid transporter family protein;(source:Araport11)"]
["AT4G24830","cyan","arginosuccinate synthase family;(source:Araport11)"]
["AT1G80640","cyan","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G65230","cyan","located in chloroplast"]
["AT5G49945","cyan","hypothetical protein (DUF1682);(source:Araport11)"]
["AT1G31850","cyan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT1G14670","cyan","Endomembrane protein 70 protein family;(source:Araport11)"]
["AT4G14090","cyan","The At4g14090 encodes a anthocyanidin 5-O-glucosyltransferase specifically glucosylating the 5-position of the flavonoid A-ring."]
["AT1G19025","cyan","DNA repair metallo-beta-lactamase family protein;(source:Araport11)"]
["AT4G22250","cyan","RING/U-box superfamily protein;(source:Araport11)"]
["AT3G58020","cyan","Chaperone DnaJ-domain superfamily protein;(source:Araport11)"]
["AT2G32730","cyan","26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit;(source:Araport11)"]
["AT1G77060","cyan","Phosphoenolpyruvate carboxylase family protein;(source:Araport11)"]
["AT5G18200","cyan","encodes an adenylyltransferase"]
["AT1G32920","cyan","hypothetical protein;(source:Araport11)"]
["AT1G09150","cyan","pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein;(source:Araport11)"]
["AT5G08000","cyan","Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and binds callose."]
["AT1G47640","cyan","seven transmembrane domain protein;(source:Araport11)"]
["AT1G49975","cyan","photosystem I reaction center subunit N;(source:Araport11)"]
["AT5G13100","cyan","Gap junction beta-4 protein;(source:Araport11)"]
["AT4G22217","cyan","Encodes a defensin-like (DEFL) family protein."]
["AT4G26650","cyan","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT1G09340","cyan","Encodes CHLOROPLAST RNA BINDING (CRB), a putative RNA-binding protein. CRB is important for the proper functioning of the chloroplast. Mutations in CRB also affects the circadian system, altering the expression of both oscillator and output genes.The mRNA is cell-to-cell mobile."]
["AT4G31930","cyan","Mitochondrial glycoprotein family protein;(source:Araport11)"]
["AT2G41905","cyan","transmembrane protein;(source:Araport11)"]
["AT1G75770","cyan","hypothetical protein;(source:Araport11)"]
["AT3G45050","cyan","transmembrane protein;(source:Araport11)"]
["AT4G29690","cyan","Alkaline-phosphatase-like family protein;(source:Araport11)"]
["AT3G09250","cyan","Nuclear transport factor 2 (NTF2) family protein;(source:Araport11)"]
["AT2G31150","cyan","ATP binding / ATPase;(source:Araport11)"]
["AT5G06190","cyan","transmembrane protein;(source:Araport11)"]
["AT3G53670","cyan","hypothetical protein;(source:Araport11)"]
["AT5G56260","cyan","Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase;(source:Araport11)"]
["AT4G32915","cyan","glutamyl-tRNA(Gln) amidotransferase subunit C;(source:Araport11)"]
["AT5G58490","cyan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT1G30300","cyan","Metallo-hydrolase/oxidoreductase superfamily protein;(source:Araport11)"]
["AT3G22104","cyan","Phototropic-responsive NPH3 family protein;(source:Araport11)"]
["AT5G08690","cyan","Encodes the mitochondrial ATP synthase beta-subunit. This subunit is encoded by a multigene family of three members (At5g08670, At5g08680, At5g08690) that shared 98% sequence identity at the amino acid level. The mRNA is cell-to-cell mobile."]
["AT4G25315","cyan","Expressed protein;(source:Araport11)"]
["AT1G57720","cyan","Translation elongation factor EF1B, gamma chain;(source:Araport11)"]
["AT2G38980","cyan","pseudogene of cationic amino acid transporter 4;(source:Araport11)"]
["AT1G63740","cyan","Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11)"]
["AT2G29180","cyan","transmembrane protein;(source:Araport11)"]
["AT4G31650","cyan","Transcriptional factor B3 family protein;(source:Araport11)"]
["AT1G52680","cyan","late embryogenesis abundant protein-related / LEA protein-like protein;(source:Araport11)"]
["AT2G25980","cyan","Mannose-binding lectin superfamily protein;(source:Araport11)"]
["AT1G80880","cyan","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G58140","cyan","phenylalanyl-tRNA synthetase class IIc family protein;(source:Araport11)"]
["AT5G11420","cyan","Encodes a DUF642 cell wall protein."]
["AT3G60440","cyan","Phosphoglycerate mutase family protein;(source:Araport11)"]
["AT1G26850","cyan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT3G63450","cyan","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT3G53980","cyan","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)"]
["AT3G62000","cyan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT3G19390","cyan","Granulin repeat cysteine protease family protein;(source:Araport11)"]
["AT1G63850","cyan","BTB/POZ domain-containing protein;(source:Araport11)"]
["AT2G19460","cyan","DUF3511 domain protein (DUF3511);(source:Araport11)"]
["AT3G63290","cyan","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT3G29180","cyan","DUF1336 family protein (DUF1336);(source:Araport11)"]
["AT1G49380","cyan","cytochrome c biogenesis protein family;(source:Araport11)"]
["AT5G52950","cyan","LIM domain protein;(source:Araport11)"]
["AT4G23670","cyan","Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11)"]
["AT2G43010","cyan","Isolated as a semidominant mutation defective in red -light responses. Encodes a nuclear localized bHLH protein that interacts with active PhyB protein. Negatively regulates phyB mediated red light responses. Involved in shade avoidance response. Protein abundance is negatively regulated by PhyB.Involved in the regulation of response to nutrient levels. Controls the resistance to B. cinerea in a COI1- and EIN2-dependent manner."]
["AT5G28900","cyan","Calcium-binding EF-hand family protein;(source:Araport11)"]
["AT1G15730","cyan","Cobalamin biosynthesis CobW-like protein;(source:Araport11)"]
["AT4G01200","cyan","Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11)"]
["AT3G25660","cyan","Amidase family protein;(source:Araport11)"]
["AT3G22180","cyan","DHHC-type zinc finger family protein;(source:Araport11)"]
["AT2G06950","cyan","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 2.7e-243 P-value blast match to dbj|BAA78426.1| polyprotein (AtRE2-1) (Arabidopsis thaliana) (Ty1_Copia-element);(source:TAIR10)"]
["AT5G35735","cyan","Auxin-responsive family protein;(source:Araport11)"]
["AT2G05330","cyan","BTB/POZ domain-containing protein;(source:Araport11)"]
["AT3G22210","cyan","transmembrane protein;(source:Araport11)"]
["AT1G03940","cyan","HXXXD-type acyl-transferase family protein;(source:Araport11)"]
["AT3G54750","cyan","downstream neighbor of Son;(source:Araport11)"]
["AT3G57220","cyan","Glycosyl transferase family 4 protein;(source:Araport11)"]
["AT5G59130","cyan","Subtilase family protein;(source:Araport11)"]
["AT4G28400","cyan","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT5G44417","cyan","pseudogene of FAD-binding Berberine family protein;(source:Araport11)"]
["AT2G41950","cyan","DNA-directed RNA polymerase subunit beta;(source:Araport11)"]
["AT4G00585","cyan","transmembrane protein;(source:Araport11)"]
["AT4G13577","cyan","hypothetical protein;(source:Araport11)"]
["AT1G69520","cyan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT1G69526","cyan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT3G28956","cyan","RNA polymerase II, Rpb4, core protein;(source:Araport11)"]
["AT1G72740","cyan","Single Myb Histone (SMH) gene family member. Contains terminal acidic SANT domain."]
["AT3G16560","cyan","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT4G25080","cyan","Encodes a protein with methyltransferase activity responsible for the methylation of magnesium protoporphyrin IX. Mutants defective in this gene are affected in chlorophyll biosynthesis and show a reduction in the accumulation of a number of major thylakoid-associated proteins including components of PSI (LHCI), PSII (LHCII, D1, CP43) and the cytochrome b6f complex (Cytf). By contrast, no significant changes were detected for the proteins of the stroma and the chloroplast envelope."]
["AT1G73180","cyan","Eukaryotic translation initiation factor eIF2A family protein;(source:Araport11)"]
["AT1G55450","cyan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT5G52550","cyan","stress response NST1-like protein;(source:Araport11)"]
["AT5G48335","cyan","hypothetical protein;(source:Araport11)"]
["AT5G47435","cyan","encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle."]
["AT1G28390","cyan","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G28395","cyan","hypothetical protein;(source:Araport11)"]
["AT3G20240","cyan","Mitochondrial substrate carrier family protein;(source:Araport11)"]
["AT5G07152","cyan","Natural antisense transcript overlaps with AT5G07150;(source:Araport11)"]
["AT1G11210","cyan","cotton fiber protein, putative (DUF761);(source:Araport11)"]
["AT1G05767","cyan","Natural antisense transcript overlaps with AT1G22810;(source:Araport11)"]
["AT5G23130","cyan","Peptidoglycan-binding LysM domain-containing protein;(source:Araport11)"]
["AT5G09443","cyan","Natural antisense transcript overlaps with AT5G09445;(source:Araport11)"]
["AT5G40910","cyan","Located in high/low density leaf shape QTL."]
["AT2G34930","cyan","disease resistance family protein / LRR family protein;(source:Araport11)"]
["AT4G30460","cyan","glycine-rich protein;(source:Araport11)"]
["AT3G59890","cyan","Dihydrodipicolinate reductase, bacterial/plant;(source:Araport11)"]
["AT2G47020","cyan","Peptide chain release factor 1;(source:Araport11)"]
["AT3G30300","cyan","O-fucosyltransferase family protein;(source:Araport11)"]
["AT1G32120","cyan","serine/threonine-protein phosphatase 7 long form-like protein;(source:Araport11)"]
["AT1G07930","cyan","GTP binding Elongation factor Tu family protein."]
["AT3G15115","cyan","serine/arginine repetitive matrix protein;(source:Araport11)"]
["AT2G44255","cyan","Natural antisense transcript overlaps with AT2G44260;(source:Araport11)"]
["AT5G54970","cyan","hypothetical protein;(source:Araport11)"]
["AT3G05350","cyan","Metallopeptidase M24 family protein;(source:Araport11)"]
["AT5G45470","cyan","transmembrane protein, putative (DUF594);(source:Araport11)"]
["AT5G28150","cyan","hypothetical protein (DUF868);(source:Araport11)"]
["AT1G79970","cyan","hypothetical protein;(source:Araport11)"]
["AT5G48440","cyan","FAD-dependent oxidoreductase family protein;(source:Araport11)"]
["AT1G68490","cyan","translocase subunit seca;(source:Araport11)"]
["AT1G14890","cyan","Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11)"]
["AT2G26400","cyan","Encodes a protein predicted to belong to the acireductone dioxygenase (ARD/ARD?)family."]
["AT3G17920","cyan","Outer arm dynein light chain 1 protein;(source:Araport11)"]
["AT3G45310","cyan","Cysteine proteinases superfamily protein;(source:Araport11)"]
["AT1G07135","cyan","glycine-rich protein;(source:Araport11)"]
["AT5G19130","cyan","GPI transamidase component family protein / Gaa1-like family protein;(source:Araport11)"]
["AT3G25700","cyan","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT1G07440","cyan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT3G06150","cyan","cytochrome P450 family protein;(source:Araport11)"]
["AT5G63040","cyan","transmembrane protein;(source:Araport11)"]
["AT4G34360","cyan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT1G22910","cyan","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT3G60450","cyan","Phosphoglycerate mutase family protein;(source:Araport11)"]
["AT4G11410","cyan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT4G13720","cyan","Inosine triphosphate pyrophosphatase family protein;(source:Araport11)"]
["AT5G53150","cyan","DnaJ heat shock amino-terminal domain protein;(source:Araport11)"]
["AT1G45163","cyan","transmembrane protein;(source:Araport11)"]
["AT3G08740","cyan","elongation factor P (EF-P) family protein;(source:Araport11)"]
["AT4G33120","cyan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT5G15610","cyan","Proteasome component (PCI) domain protein;(source:Araport11)"]
["AT1G53903","cyan","linoleate 9S-lipoxygenase-4 protein, putative (DUF581);(source:Araport11)"]
["AT5G37360","cyan","LOW protein: ammonium transporter 1-like protein;(source:Araport11)"]
["AT2G33880","cyan","Encodes a protein with similarity to WUS type homeodomain protein. Required for meristem growth and development and acts through positive regulation of WUS. Loss of function phenotypes include embryo lethality, hyponastic cotyledons, reduced root development and smaller meristems. Phenotypes can be rescued by addition of sucrose in the growth media. Appears to be regulated by cytokinin and acts downstream of cytokinin receptors."]
["AT4G31330","cyan","transmembrane protein, putative (Protein of unknown function, DUF599);(source:Araport11)"]
["AT3G60930","cyan","transposable_element_gene;(source:Araport11);similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G06603.1);(source:TAIR10)"]
["AT1G64490","cyan","DEK, chromatin associated protein;(source:Araport11)"]
["AT4G02405","cyan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT3G20370","cyan","TRAF-like family protein;(source:Araport11)"]
["AT2G12490","cyan","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 0. P-value blast match to GB:CAA31653 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana);(source:TAIR10)"]
["AT2G21280","cyan","A nuclear-encoded, plastid-targeted protein (AtSulA) whose overexpression causes severe yet stochastic plastid (shown in chloroplasts and leucoplasts) division defects. The protein does not appear to interact with either AtFtsZ proteins when studied in a yeast two-hybrid system."]
["AT2G14660","cyan","thymocyte nuclear-like protein;(source:Araport11)"]
["AT5G28850","cyan","Calcium-binding EF-hand family protein;(source:Araport11)"]
["AT2G30780","cyan","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G04040","cyan","HAD superfamily, subfamily IIIB acid phosphatase;(source:Araport11)"]
["AT5G59970","cyan","Histone superfamily protein;(source:Araport11)"]
["AT5G19100","cyan","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT5G01870","cyan","Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15."]
["AT1G10530","cyan","PADRE protein"]
["AT4G10000","cyan","Thioredoxin family protein;(source:Araport11)"]
["AT1G18485","cyan","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G17280","cyan","Phosphoglycerate mutase family protein;(source:Araport11)"]
["AT3G25940","cyan","TFIIB zinc-binding protein;(source:Araport11)"]
["AT3G07140","cyan","GPI transamidase component Gpi16 subunit family protein;(source:Araport11)"]
["AT5G43100","cyan","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT3G48420","cyan","Phosphatase like protein, located in chloroplast, involved in response to H2O2."]
["AT1G19720","cyan","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)"]
["AT5G20950","cyan","Encodes a beta-glucosidase involved in xyloglucan metabolism."]
["AT1G22440","cyan","Zinc-binding alcohol dehydrogenase family protein;(source:Araport11)"]
["AT1G72730","cyan","DEA(D/H)-box RNA helicase family protein;(source:Araport11)"]
["AT1G16080","cyan","Oxidoreductase (ECM1) located in chloroplast thylakoid."]
["AT1G20490","cyan","AMP-dependent synthetase and ligase family protein;(source:Araport11)"]
["AT1G04420","cyan","NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11)"]
["AT2G37870","cyan","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)"]
["AT2G36580","cyan","Pyruvate kinase family protein;(source:Araport11)"]
["AT5G40130","cyan","pseudogene of ribosomal protein L5 B;(source:Araport11)"]
["AT1G29090","cyan","Cysteine proteinases superfamily protein;(source:Araport11)"]
["AT2G42220","cyan","Rhodanese/Cell cycle control phosphatase superfamily protein;(source:Araport11)"]
["AT5G25570","cyan","polyamine-modulated factor 1-binding protein;(source:Araport11)"]
["AT3G15356","cyan","Legume lectin family protein;(source:Araport11)"]
["AT2G39630","cyan","Encodes a putative dolichyl-phosphate &beta;-glucosyltransferase."]
["AT5G10690","cyan","pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein;(source:Araport11)"]
["AT3G48200","cyan","transmembrane protein;(source:Araport11)"]
["AT5G54920","cyan","polyadenylate-binding protein interacting protein;(source:Araport11)"]
["AT5G45480","cyan","transmembrane protein, putative (DUF594);(source:Araport11)"]
["AT5G08060","cyan","furry;(source:Araport11)"]
["AT1G19370","cyan","membrane protein;(source:Araport11)"]
["AT3G61700","cyan","helicase with zinc finger protein;(source:Araport11)"]
["AT3G27050","cyan","plant/protein;(source:Araport11)"]
["AT5G23480","cyan","SWIB/MDM2, Plus-3 and GYF domain-containing protein;(source:Araport11)"]
["AT5G27470","cyan","seryl-tRNA synthetase / serine-tRNA ligase;(source:Araport11)"]
["AT5G52970","cyan","Membrane protein (ECM1)"]
["AT3G59870","cyan","hypothetical protein;(source:Araport11)"]
["AT2G44640","cyan","TRIGALACTOSYLDIACYLGLYCEROL-like protein;(source:Araport11)"]
["AT1G20950","cyan","Phosphofructokinase family protein;(source:Araport11)"]
["AT1G78180","cyan","Mitochondrial substrate carrier family protein;(source:Araport11)"]
["AT3G12390","cyan","Nascent polypeptide-associated complex (NAC), alpha subunit family protein;(source:Araport11)"]
["AT3G09050","cyan","8-amino-7-oxononanoate synthase;(source:Araport11)"]
["AT3G15900","cyan","homoserine O-acetyltransferase;(source:Araport11)"]
["AT3G20300","cyan","extracellular ligand-gated ion channel protein (DUF3537);(source:Araport11)"]
["AT3G17670","cyan","tetratricopeptide repeat (TPR)-containing protein;(source:Araport11)"]
["AT4G18070","cyan","suppressor;(source:Araport11)"]
["AT3G25470","cyan","bacterial hemolysin-like protein;(source:Araport11)"]
["AT1G75190","cyan","hypothetical protein;(source:Araport11)"]
["AT3G59310","cyan","solute carrier family 35 protein (DUF914);(source:Araport11)"]
["AT3G02510","cyan","Regulator of chromosome condensation (RCC1) family protein;(source:Araport11)"]
["AT2G36200","cyan","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT5G19510","cyan","Translation elongation factor EF1B/ribosomal protein S6 family protein;(source:Araport11)"]
["AT4G17300","cyan","Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis."]
["AT3G47010","cyan","Glycosyl hydrolase family protein;(source:Araport11)"]
["AT1G18340","cyan","basal transcription factor complex subunit-like protein;(source:Araport11)"]
["AT3G54470","cyan","encodes the bi-functional orotate phosphoribosyltransferase/orotidine-5'-phosphate decarboxylase catalyzing the fifth and sixth step in the de novo pyrimidine ribonucleotide biosynthesis"]
["AT3G50685","cyan","Membrane protein located in chloroplast."]
["AT5G01775","cyan","None;(source:Araport11)"]
["AT3G28220","cyan","TRAF-like family protein;(source:Araport11)"]
["AT5G17680","cyan","disease resistance protein (TIR-NBS-LRR class);(source:Araport11)"]
["AT3G17360","cyan","PHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls."]
["AT1G20770","cyan","coiled-coil protein;(source:Araport11)"]
["AT1G55475","cyan","hypothetical protein;(source:Araport11)"]
["AT4G00560","cyan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT1G31835","cyan","hypothetical protein;(source:Araport11)"]
["AT2G04170","cyan","TRAF-like family protein;(source:Araport11)"]
["AT5G61520","cyan","Major facilitator superfamily protein;(source:Araport11)"]
["AT5G19190","cyan","hypothetical protein;(source:Araport11)"]
["AT1G14230","cyan","GDA1/CD39 nucleoside phosphatase family protein;(source:Araport11)"]
["AT3G46320","cyan","Histone superfamily protein;(source:Araport11)"]
["AT4G23590","cyan","Tyrosine transaminase family protein;(source:Araport11)"]
["AT2G44760","cyan","dihydroorotate dehydrogenase (DUF3598);(source:Araport11)"]
["AT4G38550","cyan","phospholipase-like protein (PEARLI 4) family protein;(source:Araport11)"]
["AT1G23130","cyan","Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11)"]
["AT3G47836","cyan","transmembrane protein;(source:Araport11)"]
["AT3G44400","cyan","Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11)"]
["AT1G80230","cyan","Rubredoxin-like superfamily protein;(source:Araport11)"]
["AT3G56210","cyan","ARM repeat superfamily protein;(source:Araport11)"]
["AT5G66530","cyan","Galactose mutarotase-like superfamily protein;(source:Araport11)"]
["AT5G50970","cyan","transducin family protein / WD-40 repeat family protein;(source:Araport11)"]
["AT3G12345","cyan","FKBP-type peptidyl-prolyl cis-trans isomerase;(source:Araport11)"]
["AT2G33820","cyan","encodes a mitochondrial ornithine transporter which exports ornithine from the mitochondrion to the cytosol"]
["AT4G04223","cyan","other_RNA;(source:Araport11)"]
["AT1G07520","cyan","GRAS family transcription factor;(source:Araport11)"]
["AT1G17850","cyan","Rhodanese/Cell cycle control phosphatase superfamily protein;(source:Araport11)"]
["AT3G18410","cyan","NADH dehydrogenase ubiquinone 1 beta subcomplex subunit 10-B-like protein (Complex I subunit NDUFS6);(source:Araport11)"]
["AT2G38640","cyan","LURP-one-like protein (DUF567);(source:Araport11)"]
["AT2G46220","cyan","DUF2358 family protein (DUF2358);(source:Araport11)"]
["AT4G04925","cyan","transmembrane protein;(source:Araport11)"]
["AT1G71180","cyan","6-phosphogluconate dehydrogenase family protein;(source:Araport11)"]
["AT5G10920","cyan","L-Aspartase-like family protein;(source:Araport11)"]
["AT2G18110","cyan","Translation elongation factor EF1B/ribosomal protein S6 family protein;(source:Araport11)"]
["AT2G40815","cyan","Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11)"]
["AT4G13500","cyan","Membrane protein located in chloroplast."]
["AT4G22214","cyan","Encodes a defensin-like (DEFL) family protein."]
["AT5G67260","cyan","Encode CYCD3;2, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs and mediating cytokinin effects in apical growth and development. With PPD and NINJA, it plays a crucial role in leaf morphogenesis."]
["AT5G54569","cyan","Natural antisense transcript overlaps with AT5G54570;(source:Araport11)"]
["AT5G66675","cyan","transmembrane protein, putative (DUF677);(source:Araport11)"]
["AT3G17470","cyan","CRSH-dependent ppGpp synthesis causes transient increase of intracellular ppGpp at night."]
["AT2G19940","cyan","Putative N-acetyl-gamma-glutamyl-phosphate reductase;(source:Araport11)"]
["AT1G12850","cyan","Phosphoglycerate mutase family protein;(source:Araport11)"]
["AT4G24090","cyan","Membrane protein located in chloroplast."]
["AT3G03980","cyan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT2G15910","cyan","CSL zinc finger domain-containing protein;(source:Araport11)"]
["AT3G29010","cyan","Biotin/lipoate A/B protein ligase family;(source:Araport11)"]
["AT4G32175","cyan","PNAS-3-like protein;(source:Araport11)"]
["AT1G53885","cyan","linoleate 9S-lipoxygenase-4 protein, putative (DUF581);(source:Araport11). Senescence associated protein, expression regulated by cytokinin."]
["AT4G20760","cyan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT5G27330","cyan","Prefoldin chaperone subunit family protein;(source:Araport11)"]
["AT4G39280","cyan","phenylalanyl-tRNA synthetase, putative / phenylalanine-tRNA ligase;(source:Araport11)"]
["AT2G15960","cyan","Unknown protein. Expression decreased in response to proline."]
["AT2G39650","cyan","DUF506 gene family member"]
["AT1G35320","cyan","transmembrane protein;(source:Araport11)"]
["AT3G59670","cyan","elongation factor;(source:Araport11)"]
["AT1G70280","cyan","NHL domain-containing protein;(source:Araport11)"]
["AT1G78820","cyan","D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein;(source:Araport11)"]
["AT3G20680","cyan","plant/protein (DUF1995);(source:Araport11)"]
["AT2G43560","cyan","FKBP-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11)"]
["AT3G16060","cyan","ATP binding microtubule motor family protein;(source:Araport11)"]
["AT3G25480","cyan","Rhodanese/Cell cycle control phosphatase superfamily protein;(source:Araport11)"]
["AT3G11590","cyan","golgin family A protein;(source:Araport11)"]
["AT3G11040","cyan","Encodes a cytosolic beta-endo-N-acetyglucosaminidase (ENGase). ENGases N-glycans cleave the O-glycosidic linkage between the two GlcNAc residues of the N-glycan core structure and thus generate a protein with a single GlcNAc attached to asparagine."]
["AT3G12710","cyan","DNA glycosylase superfamily protein;(source:Araport11)"]
["AT1G47380","cyan","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT1G54770","cyan","Fcf2 pre-rRNA processing protein;(source:Araport11)"]
["AT1G06002","cyan","Natural antisense transcript overlaps with AT1G06000;(source:Araport11)"]
["AT2G31800","cyan","Integrin-linked protein kinase family;(source:Araport11)"]
["AT4G19900","cyan","alpha 1,4-glycosyltransferase family protein;(source:Araport11)"]
["AT4G35430","cyan","hypothetical protein;(source:Araport11)"]
["AT5G41100","cyan","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT4G28570","cyan","Long-chain fatty alcohol dehydrogenase family protein;(source:Araport11)"]
["AT5G62350","cyan","Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11)"]
["AT3G52210","cyan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT4G19006","cyan","Proteasome component (PCI) domain protein;(source:Araport11)"]
["AT4G14310","cyan","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT5G27560","cyan","DUF1995 domain protein, putative (DUF1995);(source:Araport11)"]
["AT3G62550","cyan","Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)"]
["AT2G24520","cyan","plasma membrane H+-ATPase;(source:Araport11)"]
["AT1G33590","cyan","Leucine-rich repeat (LRR) family protein;(source:Araport11)"]
["AT2G08770","cyan","None;(source:Araport11)"]
["AT1G69510","cyan","cAMP-regulated phosphoprotein 19-related protein;(source:Araport11)"]
["AT3G01820","cyan","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT1G79260","cyan","nitrobindin heme-binding domain protein;(source:Araport11)"]
["AT2G27840","cyan","Belongs to the plant specific HD2 type proteins; similar to nucleolar Zea mays histone deacetylase; HD2-p39"]
["AT3G61100","cyan","Putative endonuclease or glycosyl hydrolase;(source:Araport11)"]
["AT1G55200","cyan","kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)"]
["AT1G76650","cyan","Calmodulin like gene. Inducible by nitrate and hypoxia and involved in nitrate induced BR signaling and response to hypoxia.","CALMODULIN-LIKE 38 (CML38)"]
["AT1G60990","cyan","Encodes a chloroplast-localized COG0354 protein that requires folate for its function in Fe/S cluster biogenesis.","IBA57.2 (IBA57.2)"]
["AT1G06360","cyan","ADS4.2 has strong desaturase activity on acyl-CoA substrates longer than C32 and &#969;-7 product regio-specificity in yeast assays. It involves in characteristic (C33-C37) &#969;-7 monounsaturated alkene formation in cuticular wax of young rosette leaves.","(ADS4.2)","(ADS4.2)"]
["AT1G27930","cyan","Arabinogalactan methylesterase,involved in arabinogalactan glucuronic acid methylation. Interacts with eIF3.","(AGM1)","(AGM1)"]
["AT1G67330","cyan","Arabinogalactan methylesterase,involved in arabinogalactan glucuronic acid methylation.","(AGM2)","(AGM2)"]
["AT4G31310","cyan","AIG2-like (avirulence induced gene) family protein;(source:Araport11)","(AIG2LC)","(AIG2LC)"]
["AT1G47260","cyan","Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.","GAMMA CARBONIC ANHYDRASE 2 (GAMMA CA2)","(APFI);GAMMA CARBONIC ANHYDRASE 2 (GAMMA CA2)"]
["AT2G21590","cyan","Encodes the large subunit of ADP-glucose pyrophosphorylase, the enzyme which catalyzes the first and limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms of the large subunit (ApL1-4) have been described.","(APL4)","(APL4)"]
["AT2G43130","cyan","encodes a protein belonging to the Rab/Ypt family of small GTPases, which are implicated in intracellular vesicular traffic.","(ARA4)","(ARA4); (ATRAB11F);ARABIDOPSIS RAB GTPASE HOMOLOG A5C (ATRABA5C); (ARA-4); (RABA5C)"]
["AT3G29590","cyan","At3g29590 (At5MAT) encodes a malonyl-CoA:anthocyanidin 5-O-glucoside-6\"-O-malonyltransferase that is coordinately expressed with a epistatic 5-O-anthocyanidin glucosyltransferase (At4g14090). The enzyme is involved in the malonylation of anthocyanins in Arabidopsis.","(AT5MAT)","(AT5MAT)"]
["AT1G49720","cyan","Identified as a protein that binds to abscisic acid response elements. May mediate transcriptional regulation of ABA responses.","ABSCISIC ACID RESPONSIVE ELEMENT-BINDING FACTOR 1 (ABF1)","(ATABF1);ABSCISIC ACID RESPONSIVE ELEMENT-BINDING FACTOR 1 (ABF1)"]
["AT1G06080","cyan","Encodes a protein homologous to delta 9 acyl-lipid desaturases of cyanobacteria and acyl-CoA desaturases of yeast and mammals. expression down-regulated by cold temperature. It is involved in the desaturation of VLCFAs to make monounsaturated VLCFAs.","DELTA 9 DESATURASE 1 (ADS1)","(ATADS1);DELTA 9 DESATURASE 1 (ADS1)"]
["AT1G18080","cyan","Encodes the Arabidopsis thaliana homolog of the tobacco WD-40 repeat ArcA gene. It is a scaffold protein that acts downstream of and is phosphorylated by WNK8 in the glucose responsiveness and flowering pathways . Knockout mutants show insensitivity to gibberellin in GA-induced seed germination.","(ATARCA)","(ATARCA);RECEPTOR FOR ACTIVATED C KINASE 1 A (RACK1A_AT);RIBOSOMAL PROTEIN RACK1Z (RACK1Z);SUPPRESSOR OF ACAULIS 53 (SAC53); (ATRACK1); (RACK1A)"]
["AT1G67370","cyan","Meiotic asynaptic mutant 1 (ASY1). ASY1 protein is initially distributed as numerous foci throughout the chromatin. During early G2, the foci are juxtaposed to the nascent chromosome axes to form a continuous axis associated signal.","ASYNAPTIC 1 (ASY1)","(ATASY1);ASYNAPTIC 1 (ASY1)"]
["AT2G39190","cyan","member of ATH subfamily","(ATATH8)","(ATATH8)"]
["AT1G15690","cyan","Encodes a H(+)-translocating (pyrophosphate-energized) inorganic pyrophosphatase (H(+)-PPase; EC 3.6.1.1) located in the vacuolar membrane. Expression is found in all tissues examined, including meristems and floral organ primordium. Expression is particularly enhanced in pollen, and is repressed by light. Over expression and loss of function phenotypes suggest AVP1 is involved in regulation of apoplastic pH and auxin transport. The effect on auxin transport likely involves effects of extracellular pH on subcellular localization of auxin efflux carriers such as PIN1. The mRNA is cell-to-cell mobile.","(AVP1)","(ATAVP1); (VHP1);FUGU 5 (FUGU5); (AtVHP1;1); (AVP-3);ARABIDOPSIS THALIANA V-PPASE 3 (ATAVP3); (AVP1)"]
["AT5G48810","cyan","Encodes a cytochrome b5 isoform that localizes to the ER. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro and the protein appears to be subject to glycosylation. The mRNA is cell-to-cell mobile.","CYTOCHROME B5 ISOFORM D (CB5-D)","(ATB5-B); (B5 #3); (CYTB5-B);CYTOCHROME B5 ISOFORM D (CB5-D);ARABIDOPSIS CYTOCHROME B5 ISOFORM D (ATCB5-D)"]
["AT1G04020","cyan","Encodes a protein containing two tandem BRCA1 C-Terminal (BRCT) domains, which function in phosphorylation-dependent protein-protein interactions. Loss of function mutations cause defects in meristem organization due to failure to repress WUS. BARD1 binds to WUS promoter and over expression of BARD reduces the extent of WUS expression.","BREAST CANCER ASSOCIATED RING 1 (BARD1)","(ATBARD1);BREAST CANCER ASSOCIATED RING 1 (BARD1);REPRESSOR OF WUSCHEL1 (ROW1)"]
["AT1G75340","cyan","Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11)","(ATC3H16)","(ATC3H16)"]
["AT3G19360","cyan","Zinc finger (CCCH-type) family protein;(source:Araport11)","(ATC3H39)","(ATC3H39)"]
["AT4G23650","cyan","Encodes calcium dependent protein kinase 3 (CPK3), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK3 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. CPK6 is also a member of the Arabidopsis CDPK family.","CALCIUM-DEPENDENT PROTEIN KINASE 6 (CDPK6)","(ATCDPK6);CALCIUM-DEPENDENT PROTEIN KINASE 6 (CDPK6);CALCIUM DEPENDENT PROTEIN KINASE 3 (CPK3); (CPK3)"]
["AT3G23070","cyan","Encodes a CRM domain protein CFM3a, involved in group IIB intron splicing in chloroplasts.","CRM FAMILY MEMBER 3A (CFM3A)","(ATCFM3A);CRM FAMILY MEMBER 3A (CFM3A)"]
["AT5G67380","cyan","Casein kinase II (CK2) catalytic subunit (alpha 1). One known substrate of CK2 is Phytochrome Interacting Factor 1 (PIF1). CK2-mediated phosphorylation enhances the light-induced degradation of PIF1 to promote photomorphogenesis.","CASEIN KINASE ALPHA 1 (CKA1)","(ATCKA1);CASEIN KINASE ALPHA 1 (CKA1)"]
["AT5G64860","cyan","Encodes a maltotriose-metabolizing enzyme with chloroplastic &#945;-1,4-glucanotransferase activity. Mutant has altered starch degradation.","DISPROPORTIONATING ENZYME (DPE1)","(ATDPE1);DISPROPORTIONATING ENZYME (DPE1)"]
["AT1G79940","cyan","J domain protein localized in ER membrane. Mutants have defective pollen germination.","(ATERDJ2A)","(ATERDJ2A); (SEC. 63-1)"]
["AT5G05580","cyan","Encodes a temperature sensitive plastidic fatty acid desaturase.","FATTY ACID DESATURASE 8 (FAD8)","(AtFAD8);FATTY ACID DESATURASE 8 (FAD8)"]
["AT5G55400","cyan","Encodes a member of the fimbrin family. Different members of the fimbrin/plastin family have diverged biochemically during evolution to generate either tight actin bundles or loose networks with distinct biochemical and biophysical properties. FIM4 generates both actin bundles and branched actin filaments whereas FIM5 only generates actin bundles.","(ATFIM4)","(ATFIM4)"]
["AT1G13730","cyan","Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11)","(ATG3BP2)","(ATG3BP2); (ATG3BP-5)"]
["AT3G51820","cyan","Encodes a protein with chlorophyll synthase activity. This enzyme has been shown to perform the esterification of chlorophyllide (a and b), the last step of chlorophyll biosynthesis. Although it can use either geranylgeranyl pyrophosphate (GGPP) or phytyl pyrophosphate (PhyPP) as substrates, the esterification reaction was faster with GGPP than with PhyPP.","(G4)","(ATG4); (G4); (CHLG);PIGMENT DEFECTIVE 325 (PDE325)"]
["AT5G66030","cyan","Involved in golgi protein trafficking. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner. Localized to the golgi apparatus, tyrosine 717 in AtGRIP is crucial for Golgi localization.","(ATGRIP)","(ATGRIP); (GRIP)"]
["AT3G08030","cyan","The mRNA of this gene is expressed in viable seeds. Its detection in a dry seed lot has potential for use as a molecular marker for germination performance as absence of expression correlates with decreased germination. Encodes DUF642 cell wall protein.","(ATHA2-1)","(ATHA2-1)"]
["AT3G25900","cyan","Homocysteine S-methyltransferase family protein;(source:Araport11)","(HMT-1)","(ATHMT-1); (HMT-1)"]
["AT2G31140","cyan","Peptidase S24/S26A/S26B/S26C family protein;(source:Araport11)","(ATIMP2)","(ATIMP2)"]
["AT1G09660","cyan","RNA-binding KH domain-containing protein;(source:Araport11)","(ATKH1)","(ATKH1)"]
["AT5G19520","cyan","mechanosensitive channel of small conductance-like 9;(source:Araport11)","MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 9 (MSL9)","(ATMSL9);MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 9 (MSL9)"]
["AT5G60890","cyan","Myb-like transcription factor that modulates expression of ASA1, a key point of control in the tryptophan pathway; mutant has deregulated expression of ASA1 in dominant allele. Loss of function allele suggests ATR1 also functions at a control point for regulating indole glucosinolate homeostasis.","MYB DOMAIN PROTEIN 34 (MYB34)","(ATMYB34); (ATATR1);MYB DOMAIN PROTEIN 34 (MYB34);ALTERED TRYPTOPHAN REGULATION 1 (ATR1)"]
["AT2G42210","cyan","Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family.","(OEP16-3)","(ATOEP16-3); (OEP16-3); (ATB14.7)"]
["AT2G06050","cyan","Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence. Shows activity towards 2,4,6-trinitrotoluene. CFA-Ile, CFA-Leu, CFA-Val, CFA-Met and CFA-Ala can restore the fertility of opr3 plants by inducing filament elongation and anther dehiscence.","OXOPHYTODIENOATE-REDUCTASE 3 (OPR3)","(AtOPR3);DELAYED DEHISCENCE 1 (DDE1);OXOPHYTODIENOATE-REDUCTASE 3 (OPR3)"]
["AT5G57345","cyan","OXR is a single copy gene in Arabidopsis. It is localized to the ER. It is expressed throughout the plant and expression is induced in response to abiotic stress. While the function of OXR is unknown, overexpression results in increased abiotic stress tolerance and increased ascorbic acid content.","(ATOXR)","(ATOXR)"]
["AT2G39800","cyan","encodes a delta1-pyrroline-5-carboxylate synthase that catalyzes the rate-limiting enzyme in the biosynthesis of proline. Gene is expressed in reproductive organs and tissues under non-stress conditions but in the whole plant under water-limiting condition. Expression is also induced by abscisic acid and salt stress in a light-dependent manner. encodes a delta1-pyrroline-5-carboxylate synthase that catalyzes the rate-limiting enzyme in the biosynthesis of proline. Gene is expressed in reproductive organs and tissues under non-stress conditions but in the whole plant under water-limiting condition. Expression is also induced by abscisic acid and salt stress in a light-dependent manner. P5CS1 appears to be involved in salt stress responses related to proline accumulation, including protection from reactive oxidative species. P5CS1 appears to be present in different cells and/or different subcellular locations from P5CS2 in a tissue-dependent manner.","DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1 (P5CS1)","(ATP5CS);DELTA1-PYRROLINE-5-CARBOXYLATE SYNTHASE 1 (P5CS1)"]
["AT4G15230","cyan","pleiotropic drug resistance 2;(source:Araport11)","ATP-BINDING CASSETTE G30 (ABCG30)","(ATPDR2);PLEIOTROPIC DRUG RESISTANCE 2 (PDR2);ATP-BINDING CASSETTE G30 (ABCG30)"]
["AT5G36700","cyan","2-phosphoglycolate phosphatase 1;(source:Araport11)","2-PHOSPHOGLYCOLATE PHOSPHATASE 1 (PGLP1)","(ATPGLP1);2-PHOSPHOGLYCOLATE PHOSPHATASE 1 (PGLP1)"]
["AT5G53580","cyan","NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11)","PYRIDOXAL REDUCTASE 1 (PLR1)","(AtPLR1);PYRIDOXAL REDUCTASE 1 (PLR1)"]
["AT5G36170","cyan","Required for normal processing of polycistronic plastidial transcripts","HIGH CHLOROPHYLL FLUORESCENT 109 (HCF109)","(ATPRFB);HIGH CHLOROPHYLL FLUORESCENT 109 (HCF109)"]
["AT3G57610","cyan","encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate)","ADENYLOSUCCINATE SYNTHASE (ADSS)","(ATPURA);ADENYLOSUCCINATE SYNTHASE (ADSS)"]
["AT5G25610","cyan","responsive to dehydration 22 (RD22) mediated by ABA","RESPONSIVE TO DESICCATION 22 (RD22)","(ATRD22);RESPONSIVE TO DESICCATION 22 (RD22)"]
["AT2G20840","cyan","Secretory carrier membrane protein (SCAMP) family protein;(source:Araport11)","SECRETORY CARRIER MEMBRANE PROTEIN 3 (SCAMP3)","(ATSCAMP3);SECRETORY CARRIER MEMBRANE PROTEIN 3 (SCAMP3)"]
["AT4G25120","cyan","Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase. The Arabidopsis SRS2 is a functional 3?- to 5?-helicase. Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing.","SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2 (SRS2)","(ATSRS2);ARABIDOPSIS THALIANA SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2 (ATSRS2);SUPPRESSOR OF RAD SIX-SCREEN MUTANT 2 (SRS2)"]
["AT2G03760","cyan","Encodes a brassinosteroid sulfotransferase. In vitro experiements show that this enzyme has a preference for 24-epibrassinosteroids, particularly 24-epicathasterone, but does not act on castasterone and brassinolide. It also shows sulfating activity toward flavonoids. It is differentially expressed during development, being more abundant in young seedlings and actively growing cell cultures. Expression is induced in response to salicylic acid and methyl jasmonate and bacterial pathogens.","SULPHOTRANSFERASE 12 (SOT12)","(ATSULT202A1);SULFOTRANSFERASE 202A1 (SULT202A1);ARABIDOPSIS THALIANA SULFOTRANSFERASE 1 (ATST1); (ST);SULFOTRANSFERASE 1 (ST1); (RAR047);SULPHOTRANSFERASE 12 (SOT12);SULPHOTRANSFERASE 12 (AtSOT12); (AtSOT1);SULPHOTRANSFERASE 1 (SOT1)"]
["AT4G24670","cyan","Encodes a protein with similarity to the TAA1 trytophan aminotransferase involved in IAA biosynthesis. Double mutant analyses suggest that this protein is involved in regulating many aspects of plant growth and development from embryogenesis to flower formation and plays a role in ethylene-mediated signaling.TAR2 is required for reprogramming root architecture in response to low nitrogen conditions.","TRYPTOPHAN AMINOTRANSFERASE RELATED 2 (TAR2)","(ATTAR2);TRYPTOPHAN AMINOTRANSFERASE RELATED 2 (TAR2)"]
["AT2G29530","cyan","Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus. Together with AtTIM9, AtTIM10 is non-redundantly essential for maintaining mitochondrial function of early embryo proper cells and endosperm free-nuclei.","TRANSLOCASE OF THE INNER MEMBRANE 10 (TIM10)","(ATTIM10);TRANSLOCASE OF THE INNER MEMBRANE 10 (TIM10)"]
["AT4G38920","cyan","vacuolar-type H[+]-ATPase C3;(source:Araport11)","VACUOLAR-TYPE H(+)-ATPASE C3 (VHA-C3)","(AVA-P3);VACUOLAR-TYPE H(+)-ATPASE C3 (ATVHA-C3);VACUOLAR-TYPE H(+)-ATPASE C3 (VHA-C3)"]
["AT1G28580","cyan","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates.","(AXE1)","(AXE1); (GELP7)"]
["AT4G32460","cyan","BDX is a DUF642 cell wall protein primarily expressed in vascular tissues of roots, leaves and embryos. Mutants show defects in seed and embryo development. Promotes PME activity.","(BDX)","(BDX); (ATHA1-1); (BIIDXI)"]
["AT1G66270","cyan","BGLU21 encodes a beta-glucosidase that has a high level of activity against the naturally occuring secondary metabolite scopolin. Recombinant BGLU21 produced in insect cells shows lower levels of activity using the structurally similar substrates esculin (33%) and 4-MU-glucoside (9%). BGLU21 is glycosylated in planta and has a C-terminal ER retention signal. Transcript analysis as well as protein extraction and western blotting from various plant organs suggest that BGLU21 is only present in roots and seedlings. Transcript levels increase in response to cold, auxin (2,4-D), and methyl jasmonate treatments.","(BGLU21)","(BGLU21)"]
["AT1G66280","cyan","Glycosyl hydrolase superfamily protein;(source:Araport11)","(BGLU22)","(BGLU22)"]
["AT3G57060","cyan","Similar to mamalian condensin. Mutants have reduced fertility.","(CAP-D2)","(CAP-D2)"]
["AT5G57580","cyan","Required for the expression of a guardee/decoy or a negative regulator of immunity mediated by receptors carrying an N-terminal Toll-interleukin-1 receptor-like domain.","(CBP60B)","(CBP60B)"]
["AT2G24300","cyan","Calmodulin-binding protein;(source:Araport11)","(CBP60E)","(CBP60E)"]
["AT3G48750","cyan","A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase.","CELL DIVISION CONTROL 2 (CDC2)","(CDKA;1); (CDC2AAT); (CDK2);CELL DIVISION CONTROL 2 (CDC2); (CDC2A); (CDKA1)"]
["AT4G25370","cyan","Subunit of the plastid CLP chaperone-protease system.","(CLPT1)","(CLPT1)"]
["AT4G12060","cyan","Protein involved in chloroplast proteostasis which was highly enriched in the CLPC1-TRAP.","(CLPT2)","(CLPT2)"]
["AT1G12390","cyan","ER cargo receptor","(CNIH4)","(CNIH4)"]
["AT2G45770","cyan","chloroplast SRP receptor homolog, alpha subunit CPFTSY. Required for LHCP integration into isolated thylakoids.","(CPFTSY)","(CPFTSY)"]
["AT5G08650","cyan","Critical for chloroplast protein synthesis under suboptimal conditions. Essential translation factor that promotes the efficiency of chloroplast protein synthesis.","(CPLEPA)","(CPLEPA)"]
["AT3G63530","cyan","Encodes a novel E3 ubiquitin ligase that acts as a central negative regulator of Arabidopsis floral organ size. Organ size is limited by restricting the period of proliferative growth, rather than the rate of growth and appears to act in a novel pathway, independent of ANT and JAG. Both mRNA and protein are expressed in all actively growing regions of the plant and the vasculature and the protein is rapidly turned over by proteasome-mediated degradation.","BIG BROTHER (BB)","(CTL19);BIG BROTHER (BB); (BB2);ENHANCER1 OF DA1 (EOD1)"]
["AT4G17740","cyan","Cleaves the C-terminal extension of the D1 precursor (pD1) to form mature D1; initiation of the formation of the oxygenic D1/D2 type PSII.","(CTPA)","(CTPA)"]
["AT1G59620","cyan","Encodes CW9.","(CW9)","(CW9)"]
["AT3G27240","cyan","Cytochrome C1 family;(source:Araport11)","(CYC1-1)","(CYC1-1)"]
["AT5G48630","cyan","similar to CycC1;1, CycC1;2 also has interaction with ABI5 in planta.","(CYCLINC1-2)","(CYCLINC1-2)"]
["AT5G14740","cyan","Encodes a beta carbonic anhydrase likely to be localized in the cytoplasm. Expression of its mRNA is seen in etiolated seedlings and points to a possible nonphotosynthetic role for this isoform.","CARBONIC ANHYDRASE 2 (CA2)","(DEG12);BETA CARBONIC ANHYDRASE 2 (BETA CA2);CARBONIC ANHYDRASE 2 (CA2);CARBONIC ANHYDRASE 18 (CA18)"]
["AT5G38420","cyan","Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410). Activated by OXS2 under the treatment of salt.","RUBISCO SMALL SUBUNIT 2B (RBCS2B)","(DEG24);RUBISCO SMALL SUBUNIT 2B (RBCS2B)"]
["AT2G04390","cyan","Ribosomal S17 family protein;(source:Araport11)","(DS17)","(DS17);RIBOSOMAL PROTEIN ES17Z (ES17Z)"]
["AT5G54880","cyan","Involved in posttranscriptional modification of tRNA. Required for the acp3U20a modification of cytosolic tRNA.","(DTWD2B)","(DTWD2B)"]
["AT5G52960","cyan","Interacts with chloroplast chaperone CLPC1, which unfolds and delivers substrates to the stromal CLPPRT protease complex for degradation.","(DUF3143)","(DUF3143)"]
["AT1G32160","cyan","Interacts with chloroplast chaperone CLPC1, which unfolds and delivers substrates to the stromal CLPPRT protease complex for degradation.","(DUF760?1)","(DUF760?1); (DUF760-1)"]
["AT1G63610","cyan","hypothetical protein;(source:Araport11)","(DUF760-3)","(DUF760-3)"]
["AT3G55410","cyan","Encodes the E1 subunit of the 2-oxoglutarate dehydrogenase.","(E1-OGDH1)","(E1-OGDH1)"]
["AT5G60390","cyan","Alpha subunit of the elongation factor-1 complex. Functions in catalytic delivery of aminoacyl tRNAs to the ribosome during protein synthesis.","(EF1ALPHA)","(EF1ALPHA)"]
["AT2G24290","cyan","ubiquitin-associated protein (DUF1068);(source:Araport11)","(ELMO5)","(ELMO5)"]
["AT1G07920","cyan","GTP binding Elongation factor Tu family protein.","(ELONGATION FACTOR-TU FAMILY)","(ELONGATION FACTOR-TU FAMILY)"]
["AT1G30580","cyan","GTP binding protein;(source:Araport11)","(ENGD-1)","(ENGD-1)"]
["AT1G08890","cyan","Early response to dehydration six-like (ESL) family member.","(ESL3.05)","(ESL3.05)"]
["AT2G32170","cyan","methyltransferase gene","(EXPRS)","(EXPRS)"]
["AT4G19830","cyan","member of the thylakoid lumen proteome","(FKBP17-1)","(FKBP17-1)"]
["AT1G12160","cyan","Encodes a flavin-containing monooxygenases involved in biosynthesis of aliphatic glucosinolates.","(FMOGS-OX7)","(FMOGS-OX7)"]
["AT3G51800","cyan","putative nuclear DNA-binding protein G2p (AtG2) mRNA,","(ATG2)","(G2P); (ATG2);ERBB-3 BINDING PROTEIN 1 (EBP1);A. THALIANA ERBB-3 BINDING PROTEIN 1 (ATEBP1)"]
["AT1G32470","cyan","Single hybrid motif superfamily protein;(source:Araport11)","(GDC-H1)","(GDC-H1)"]
["AT3G16370","cyan","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. The mRNA is cell-to-cell mobile.","(GGL19)","(GGL19)"]
["AT4G18970","cyan","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates.","(GGL22)","(GGL22)"]
["AT3G60210","cyan","GroES-like family protein;(source:Araport11)","(GROES)","(GROES)"]
["AT3G23830","cyan","encodes a glycine-rich RNA binding protein. Gene expression is induced by cold and reduced by ionic (salt) and non-ionic (mannitol) osmotic stress. Lines overexpressing the gene are slightly more tolerant to osmotic stress during germination.","RNA-BINDING GLYCINE-RICH PROTEIN A4 (RBGA4)","(GR-RBP4);GLYCINE-RICH RNA-BINDING PROTEIN 4 (GRP4); (AtGRP4);RNA-BINDING GLYCINE-RICH PROTEIN A4 (RBGA4)"]
["AT2G41640","cyan","Potential heat-priming associated target of ATAF1.","(GT61)","(GT61)"]
["AT4G24450","cyan","phosphoglucan, water dikinase;(source:Araport11)","PHOSPHOGLUCAN, WATER DIKINASE (PWD)","(GWD3);PHOSPHOGLUCAN, WATER DIKINASE (PWD); (ATGWD2); (AT4G24450)"]
["AT5G59870","cyan","Encodes HTA6, a histone H2A protein.","HISTONE H2A 6 (HTA6)","(H2A.W.6);HISTONE H2A 6 (HTA6)"]
["AT3G14930","cyan","Uroporphyrinogen decarboxylase;(source:Araport11)","(HEME1)","(HEME1)"]
["AT2G40490","cyan","Uroporphyrinogen decarboxylase;(source:Araport11)","(HEME2)","(HEME2)"]
["AT5G65360","cyan","Histone 3.1.","HISTONE 3.1 (H3.1)","(HTR1);HISTONE 3.1 (H3.1)"]
["AT1G09200","cyan","Histone 3.1","HISTONE 3.1 (H3.1)","(HTR2);HISTONE 3.1 (H3.1)"]
["AT3G06660","cyan","PAPA-1-like family protein / zinc finger (HIT type) family protein;(source:Araport11)","(IES2B)","(IES2B)"]
["AT1G31180","cyan","The AtIMD3 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids.","(IMDH3)","(IMDH3)"]
["AT4G33110","cyan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)","(LIME1)","(LIME1)"]
["AT1G32080","cyan","Encodes a plant LrgAB/CidAB protein localized to the chloroplast envelope that is involved in chloroplast development, carbon partitioning, ABA/drought response, and leaf senescence. The gene may have evolved from gene fusion of bacterial lrgA and lrgB.","(LrgB)","(LrgB); (AtLrgB); (PLGG); (PLGG1)"]
["AT2G39420","cyan","alpha/beta-Hydrolases superfamily protein;(source:Araport11)","(MAGL8)","(MAGL8)"]
["AT4G39690","cyan","Encodes a homolog of the yeast mic60 protein that is localized in the inner membrane of the mitochondrion, interacts with Tom40 as part of a large lipid-enriched complex called the mitochondrial transmembrane lipoprotein complex (MTL) and is involved in mitochondrial lipid trafficking.","(MIC60)","(MIC60)"]
["AT4G02600","cyan","A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO1 belongs to the clade II, with ATMLO13 and ATMLO15. The gene is expressed during early seedling growth, in root and cotyledon vascular system, in pollen and in papillae, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).","(MLO1)","(MLO1);MILDEW RESISTANCE LOCUS O 1 (ATMLO1)"]
["AT1G21920","cyan","MRF1 is related to SET7/9 proteins but contains an atypical SET domain. It is expressed in phloem and mutants have a weak late flowering phenotype. Phosphatidylinositol 4-phosphate 5-kinase (PIP5K) enzyme family member.","MORN-MOTIF REPEAT PROTEIN REGULATING FLOWERING 1 ( (MRF1)","(MORN3);MORN-MOTIF REPEAT PROTEIN REGULATING FLOWERING 1 ( (MRF1)"]
["AT3G24570","cyan","contributes to osmotic stress tolerance","(MVP17)","(MVP17)"]
["AT2G22770","cyan","Regulates the development of ER bodies. also involves in response to the endophytic fungus Piriformospora indica.","(NAI1)","(NAI1)"]
["AT3G15950","cyan","Similar to TSK-associating protein 1 (TSA1), contains 10 EFE repeats, a novel repeat sequence unique to plants. Expressed preferentially in the roots.Protein is localized to ER bodies- an endoplasmic reticulum derived structure. Loss of function mutations lack ER bodies.","(NAI2)","(NAI2)"]
["AT4G09320","cyan","nucleoside diphosphate kinase type 1 (NDPK1) gene, complete The mRNA is cell-to-cell mobile.","(NDPK1)","(NDPK1); (ATNDK1);NUCLEOSIDE DIPHOSPHATE KINASE 1 (NDK1)"]
["AT1G54250","cyan","One of two highly similar proteins that can serve as non-catalytic subunits of Nuclear RNA polymerases II and V; homologous to budding yeast RPB8. Probably redundant with At3g59600.","(NRPB8A)","(NRPB8A); (NRPE8A); (ATRPABC16.5)"]
["AT2G40520","cyan","Nucleotidyltransferase family protein;(source:Araport11)","(NTP2)","(NTP2)"]
["AT4G15160","cyan","According to PMID:14623884, PAC2 has not been correctly annotated; At4g15160 (protease inhibitor/seed storage/lipid transfer protein (LTP) family protein) containsAtPAC2(nucleotides 3269-3831).","(PAC2)","(PAC2)"]
["AT3G18940","cyan","clast3-like protein;(source:Araport11)","(PBAC2)","(PBAC2)"]
["AT1G48170","cyan","proteasome assembly chaperone;(source:Araport11)","(PBAC4)","(PBAC4)"]
["AT2G20960","cyan","phospholipase-like protein (PEARLI 4) family protein;(source:Araport11)","(pEARLI4)","(pEARLI4)"]
["AT4G23820","cyan","Pectin lyase-like superfamily protein;(source:Araport11)","(PGF13)","(PGF13)"]
["AT5G47760","cyan","serine/threonine protein kinase","2-PHOSPHOGLYCOLATE PHOSPHATASE 2 (PGLP2)","(PGLP2);2-PHOSPHOGLYCOLATE PHOSPHATASE 2 (PGLP2); (ATPK5);2-PHOSPHOGLYCOLATE PHOSPHATASE 2 (ATPGLP2)"]
["AT3G17340","cyan","Ran effector.","(PLANTKAP)","(PLANTKAP)"]
["AT3G15730","cyan","Encodes phospholipase D alpha 1 (PLD alpha 1). Positive regulator of abscisic acid (ABA) mediated stomatal movements. PLD alpha 1 plays an important role in seed deterioration and aging in Arabidopsis. The mRNA is cell-to-cell mobile.","PHOSPHOLIPASE D ALPHA 1 (PLDALPHA1)","(PLD);PHOSPHOLIPASE D ALPHA 1 (PLDALPHA1)"]
["AT1G67750","cyan","Pectate lyase which plays a critical role in xylem vascular development.","(PLL16)","(PLL16)"]
["AT1G62770","cyan","PMEI9 pectin methyleseterase inhibitor. Expressed in many plant tissues.","(PMEI9)","(PMEI9)"]
["AT5G41880","cyan","DNA primase POLA3;(source:Araport11)","(POLA3)","(POLA4); (POLA3)"]
["AT4G01690","cyan","Encodes protoporphyrinogen oxidase (PPOX).","(PPOX)","(PPO1); (HEMG1); (PPOX)"]
["AT3G09260","cyan","Encodes beta-glucosidase.The major constituent of ER bodies. One of the most abundant proteins in Arabidopsis seedlings. Exist in an soluble (inactive) and non-soluble (active) form, most probably formed in a polymerization process. Involved in the mutualistic interaction between Arabidopsis and the endophytic fungus Piriformospora indica.","(PYK10)","(PYK10); (PSR3.1); (BGLU23);LONG ER BODY (LEB)"]
["AT1G16920","cyan","small GTP-binding protein (Rab11)similar to YPT3/RAB11 proteins in yeast and mammals, respectively. YPT3/RAB11 is involved in intracellular protein trafficking.","RAB GTPASE HOMOLOG A1B (RABA1b)","(RAB11);RAB GTPASE HOMOLOG A1B (ATRABA1B);RAB GTPASE HOMOLOG A1B (RABA1b);BFA-VISUALIZED EXOCYTIC TRAFFICKING DEFECTIVE 5 (BEX5)"]
["AT2G44610","cyan","Golgi-localized small GTPase, participates in the trafficking of CESA6 to the plasma membrane, maintaining Golgi organization and morphology, possible role in exocytosis. Plays and important role in hypocotyl growth by influencing cell elongation/growth and deposition of cellulose microfibrils in the cell wall. Plays an important role in cellulose synthesis. Influences both the distribution and velocity of cellulose synthase complexes in the plasma membrane. Encodes a GTP-binding protein with similarity to yeast YPT6 . RAB6 can complement the yeast YTP mutant.","(RAB6A)","(RAB6); (ATRABH1B); (ATRAB6A); (RAB6A)"]
["AT3G58640","cyan","Together with SnRK2.6/OST1 mediates abscisic acid (ABA)-induced stomatal closure. RAF15 directly phosphorylates SnRK2.6/OST1 at the conserved Ser175 residue in its activation loop.","(RAF15)","(RAF15)"]
["AT2G15430","cyan","Non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB3 and the E. coli RNA polymerase alpha subunit. A closely related paralog, encoded by At2g15400, can substitute for At2g15430 in the context of Pol V.","(NRPB3)","(RBP36A); (RPB35.5A); (NRPB3); (NRPD3); (NRPE3A)"]
["AT5G38480","cyan","general regulatory factor, a 14-3-3 gene","GENERAL REGULATORY FACTOR 3 (GRF3)","(RCI1);GENERAL REGULATORY FACTOR 3 (GRF3)"]
["AT4G26540","cyan","Member of ROOT MERISTEM GROWTH FACTOR family of peptide ligands.","(RGFR3)","(RGFR3);RGF1 INSENSITIVE 3 (RGI3)"]
["AT4G21770","cyan","Enzyme for the pseudouridine (&#936;) to uridine (U) conversion.","(RLUA3)","(RLUA3)"]
["AT1G55140","cyan","Encodes one of two chloroplast Mini-RNase III-like enzymes in Arabidopsis. Double mutants display imprecise maturation of 23S rRNA and other rRNAs.","(RNC3)","(RNC3)"]
["AT5G61000","cyan","Replication factor-A protein 1-like protein;(source:Araport11)","(RPA70D)","(RPA70D);REPLICATION PROTEIN A 1D (RPA1D); (ATRPA70D)"]
["AT5G48760","cyan","Ribosomal protein L13 family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL13W (UL13W)","(RPL13AD);RIBOSOMAL PROTEIN UL13W (UL13W)"]
["AT4G27090","cyan","Cytoplasmic ribosomal protein.Essential gene as homozygotes are lethal and heterozygotes have various defects in gametophyte development and function.","(RPL14B)","(RPL14B);RIBOSOMAL PROTEIN EL14Y (EL14Y)"]
["AT5G45775","cyan","Overexpression results in short and curled rosette leaves; both the cell size and cell arrangement are affected in L16D-OEs. Overexpression of this gene decreases the expression of genes involved in plant growth, but increases the expression of genes involved in immune response suggesting that RPL16D is involved in the balance between plant growth and immune response.","RIBOSOMAL PROTEIN UL5W (UL5W)","(RPL16D);RIBOSOMAL PROTEIN UL5W (UL5W)"]
["AT1G23290","cyan","Encodes a ribosomal protein L27A, a constituent of the large subunit of the ribosomal complex. Regulated by TCP20. The mRNA is cell-to-cell mobile.","(RPL27AB)","(RPL27AB);RIBOSOMAL PROTEIN L27A (RPL27A);RIBOSOMAL PROTEIN UL15Y (UL15Y)"]
["AT1G77940","cyan","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11)","(RPL30B)","(RPL30B);RIBOSOMAL PROTEIN EL30Y (EL30Y)"]
["AT4G00100","cyan","Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development The mRNA is cell-to-cell mobile.","RIBOSOMAL PROTEIN S13A (RPS13A)","(RPS13);RIBOSOMAL PROTEIN S13A (ATRPS13A);POINTED FIRST LEAF 2 (PFL2);RIBOSOMAL PROTEIN US15Y (US15Y);RIBOSOMAL PROTEIN S13A (RPS13A)"]
["AT3G27160","cyan","GHS1 encodes plastid ribosomal protein S21The mRNA is cell-to-cell mobile. Required for photosynthesis and C/N balance.","(RPS21)","(RPS21);LOW PHOTOSYNTHETIC EFFICIENCY2 (LPE2);RIBOSOMAL PROTEIN BS21C (BS21C)"]
["AT1G23410","cyan","cytosolic ribosomal protein gene, part of eS31 family","(RPS27AA)","(RPS27AA);RIBOSOMAL PROTEIN ES31Z (ES31Z)"]
["AT5G56670","cyan","Ribosomal protein S30 family protein;(source:Araport11)","(RPS30C)","(RPS30C);RIBOSOMAL PROTEIN ES30X (ES30X)"]
["AT5G63980","cyan","Encodes a bifunctional protein that has 3'(2'),5'-bisphosphate nucleotidase and inositol polyphosphate 1-phosphatase activities and rescues sulfur assimilation mutants in yeast. It is involved in the response to cold, drought (negative regulator of drought tolerance), and ABA. Mutants in this gene exhibit enhanced induction of stress genes in response to cold, ABA, salt and dehydration and increased levels of 3'-phosphoadenosine 5'-phosphate (PAP). Involved in degradation of small mRNAs. Mutants also affect the accumulation of miRNA target cleavage products. Regulates light-dependent repression of hypocotyl elongation and flowering time via its 3'(2'),5'-bisphosphate nucleotidase activity. Its activity is sensitive to the redox state of its environment, decreasing under oxidative conditions and is regulated by dimerization and intra and inter-molecular disulfide bond formation.","(SAL1)","(SAL1);ALTERED EXPRESSION OF APX2 8 (ALX8); (ATSAL1);HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2 (HOS2); (OLD101);ROTUNDA 1 (RON1);SUPPRESSORS OF PIN1 OVEREXPRESSION 1 (SUPO1); (ATFRY1);FIERY1 (FRY1)"]
["AT4G14870","cyan","Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. The mRNA is cell-to-cell mobile.","(SECE1)","(SECE1)"]
["AT3G45100","cyan","encodes Arabidopsis homolog of a conserved protein involved in the first step of the GPI biosynthetic pathway.","(SETH2)","(SETH2)"]
["AT5G38110","cyan","This gene is predicted to encode a silencing group A protein. Plant lines expressing RNAi constructs directed against SGA1 have reduced levels of agrobacterium-mediated root transformation. Its expression is regulated during cell cycle progression through E2F transcription factors Functions redundantly with AT1G66740 during gametogenesis","ANTI- SILENCING FUNCTION 1B (ASF1B)","(SGA1);ANTI- SILENCING FUNCTION 1B (ASF1B); (SGA01)"]
["AT4G35100","cyan","a member of the plasma membrane intrinsic protein PIP. functions as aquaporin. Salt-stress-inducible MIP","PLASMA MEMBRANE INTRINSIC PROTEIN 3 (PIP3)","(SIMIP);PLASMA MEMBRANE INTRINSIC PROTEIN 3 (PIP3);PLASMA MEMBRANE INTRINSIC PROTEIN 3A (PIP3A);PLASMA MEMBRANE INTRINSIC PROTEIN 2;7 (PIP2;7)"]
["AT1G54385","cyan","At1G54385 encodes the plant KASH protein SINE1; SINE1 interacts with SUN1 and SUN2, is colocalized with F-actin, and is localized at the nuclear envelope.","(SINE1)","(SINE1)"]
["AT4G02840","cyan","SmD1b is one of two Yeast SmD1 orthologs, the other being SmD1a.SmD1b accumulates to higher levels than SmD1a.It is localized to the nucleolus and nuclear speckles and appears to have a role in RNA splicing and indirectly facilitating PTGS.","(SMD1B)","(SMD1B)"]
["AT1G64500","cyan","A member of a protein family found in plants and animals that contain conserved C-terminal glutaredoxin-like and putative zinc-binding cysteine-rich domains. It is involved in light stimulated actin bundling and chloroplast movement. The mRNA is cell-to-cell mobile.","(THRUMIN1)","(THRUMIN1)"]
["AT1G72840","cyan","NBS TIR LRR protein. It is induced in response to bacterial pathogens and overexpression results in cell death in leaves.","(TNL40)","(TNL40)"]
["AT2G30320","cyan","Enzyme for the pseudouridine (&#936;) to uridine (U) conversion.","(TRUA2)","(TRUA2)"]
["AT5G27820","cyan","Member of the uL18 RNA-binding protein family. uL18 proteins share a short structurally conserved domain that binds the 5S rRNA and allow its incorporation into ribosomes.","(UL18M)","(UL18M)"]
["AT1G61180","cyan","Coiled-coil nucleotide-binding leucine-rich-repeat protein involved in disease resistance.","(UNI)","(UNI)"]
["AT3G28710","cyan","Vacuolar-type H + -ATPase (V-ATPase) is a multisubunit proton pump located on the endomembranes, which plays an important role in plant growth. VHA-d1 is one of the two subunit isoforms.","(VHA-D1)","(VHA-D1)"]
["AT1G58380","cyan","Ribosomal protein S5 family protein;(source:Araport11)","(XW6)","(XW6);RIBOSOMAL PROTEIN US5Z (US5Z)"]
["AT1G58270","cyan","ZW9 mRNA, complete cds The mRNA is cell-to-cell mobile.","(ZW9)","(ZW9)"]
["AT2G05840","cyan","Encodes 20S proteasome subunit PAA2 (PAA2).","20S PROTEASOME SUBUNIT PAA2 (PAA2)","20S PROTEASOME SUBUNIT PAA2 (PAA2)"]
["AT1G74040","cyan","Encodes an active Arabidopsis isopropylmalate synthase IPMS2. Involved in leucine biosynthesis. Do not participate in the chain elongation of glucosinolates. Expressed constitutively throughout the plant. Loss of IPMS2 can be compensated by a second isopropylmalate synthase gene IPMS1 (At1g18500).","2-ISOPROPYLMALATE SYNTHASE 1 (IMS1)","2-ISOPROPYLMALATE SYNTHASE 1 (IMS1); (MAML-3);SOPROPYLMALATE SYNTHASE 2 (IPMS2)"]
["AT3G19010","cyan","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)","2-OXOGLUTARATE OXYGENASE (2-OXOGLUTARATE OXYGENASE)","2-OXOGLUTARATE OXYGENASE (2-OXOGLUTARATE OXYGENASE)"]
["AT4G11080","cyan","Encodes a protein containing three copies of the HMG (high mobility group)-box domain. The two Arabidopsis 3xHMG-box proteins are: AT4G11080 (3xHMG-box1) and AT4G23800 (3xHMG-box2). Interacts with mitotic and meiotic chromosomes.","3XHIGH MOBILITY GROUP-BOX1 (3xHMG-box1)","3XHIGH MOBILITY GROUP-BOX1 (3xHMG-box1)"]
["AT2G26930","cyan","Encodes a 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase.","4-(CYTIDINE 5'-PHOSPHO)-2-C-METHYL-D-ERITHRITOL KINASE (CDPMEK)","4-(CYTIDINE 5'-PHOSPHO)-2-C-METHYL-D-ERITHRITOL KINASE (CDPMEK); (ISPE);4-(CYTIDINE 5&#8242;-DIPHOSPHO)-2-C-METHYL-D-ERYTHRITOL KINASE (CMEK);PIGMENT DEFECTIVE 277 (PDE277);4-(CYTIDINE 5'-PHOSPHO)-2-C-METHYL-D-ERITHRITOL KINASE (ATCDPMEK);4-(CYTIDINE 5&#8242;-DIPHOSPHO)-2-C-METHYL-D-ERYTHRITOL KINASE (CMK)"]
["AT1G72370","cyan","acidic protein associated to 40S ribosomal subunit of ribosomes. Involved in polysome formation during active protein synthesis. Expressed in actively growing tissue.","40S RIBOSOMAL PROTEIN SA (P40)","40S RIBOSOMAL PROTEIN SA (P40); (AP40);RIBOSOMAL PROTEIN US2Z (US2Z); (RPSAA); (RP40)"]
["AT1G69740","cyan","Encodes a putative 5-aminolevulinate dehydratase involved in chlorophyll biosynthesis.","(HEMB1)","5-AMINOLEVULINIC ACID DEHYDRATASE 1 (ALAD1); (HEMB1)"]
["AT1G01100","cyan","Co-orthologous gene of large ribosomal subunit protein RPP1.","60S ACIDIC RIBOSOMAL PROTEIN P1-1 (RPP1A)","60S ACIDIC RIBOSOMAL PROTEIN P1-1 (RPP1A);RIBOSOMAL PROTEIN P1W (P1W);RPP1 CO-ORTHOLOGOUS GENE 1 (RPP1.1)"]
["AT4G00810","cyan","Co-orthologous gene of large ribosomal subunit protein RPP1.","60S ACIDIC RIBOSOMAL PROTEIN P1-2 (RPP1B)","60S ACIDIC RIBOSOMAL PROTEIN P1-2 (RPP1B);RPP1 CO-ORTHOLOGOUS GENE 2 (RPP1.2);RIBOSOMAL PROTEIN P1Z (P1Z)"]
["AT5G47700","cyan","Co-orthologous gene of large ribosomal subunit protein RPP1.","60S ACIDIC RIBOSOMAL PROTEIN P1-3 (RPP1C)","60S ACIDIC RIBOSOMAL PROTEIN P1-3 (RPP1C);RIBOSOMAL PROTEIN P1Y (P1Y);RPP1 CO-ORTHOLOGOUS GENE 3 (RPP1.3)"]
["AT1G64190","cyan","6-phosphogluconate dehydrogenase family protein;(source:Araport11)","6-PHOSPHOGLUCONATE DEHYDROGENASE 1 (PGD1)","6-PHOSPHOGLUCONATE DEHYDROGENASE 1 (PGD1)"]
["AT5G41670","cyan","6-phosphogluconate dehydrogenase family protein;(source:Araport11)","6-PHOSPHOGLUCONATE DEHYDROGENASE 3 (PGD3)","6-PHOSPHOGLUCONATE DEHYDROGENASE 3 (PGD3)"]
["AT5G46800","cyan","Seedling lethal mutation; Mitochondrial Carnitine Acyl Carrier-Like Protein","A BOUT DE SOUFFLE (BOU)","A BOUT DE SOUFFLE (BOU)"]
["AT3G10160","cyan","Encodes a protein with tetrahydrofolylpolyglutamate synthase activity that is located in the mitochondrial matrix. One of the three folylpolyglutamate synthetase isoforms (FPGSs): FPGS1 (At5g05980, plastidic), FPGS2 (At3g10160, mitochondrial) and FPGS3 (At3g55630, cytosolic).","DHFS-FPGS HOMOLOG C (DFC)","A. THALIANA DHFS-FPGS HOMOLOG C (ATDFC);DHFS-FPGS HOMOLOG C (DFC);FOLYLPOLYGLUTAMATE SYNTHETASE 2 (FPGS2)"]
["AT1G12780","cyan","Encodes a UDP-glucose epimerase that catalyzes the interconversion of the sugar nucleotides UDP-glucose UDP-galactose via a UDP-4-keto-hexose intermediate. Responsive to stress.","UDP-D-GLUCOSE/UDP-D-GALACTOSE 4-EPIMERASE 1 (UGE1)","A. THALIANA UDP-GLC 4-EPIMERASE 1 (ATUGE1);UDP-D-GLUCOSE/UDP-D-GALACTOSE 4-EPIMERASE 1 (UGE1)"]
["AT4G34900","cyan","xanthine dehydrogenase 2;(source:Araport11)","XANTHINE DEHYDROGENASE 2 (XDH2)","A. THALIANA XANTHINE DEHYDROGENASE 2 (ATXDH2);XANTHINE DEHYDROGENASE 2 (XDH2)"]
["AT1G60600","cyan","Encodes a protein similar to 1,4-dihydroxy-2-naphthoic acid phytyltransferase involved in phylloquinone and plastoquinone biosynthesis. Mutants are pale green and heterotrophic with defects in photosynthetic electron transport.","ABERRANT CHLOROPLAST DEVELOPMENT 4 (ABC4)","ABERRANT CHLOROPLAST DEVELOPMENT 4 (ABC4)"]
["AT4G33680","cyan","Encodes an L,L-diaminopimelate aminotransferase. Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139.","ABERRANT GROWTH AND DEATH 2 (AGD2)","ABERRANT GROWTH AND DEATH 2 (AGD2);ARF-GAP DOMAIN 2 (AGD2)"]
["AT1G77330","cyan","similar to 1-aminocyclopropane-1-carboxylate oxidase GI:3386565 from (Sorghum bicolor)","ACC OXIDASE 5 (ACO5)","ACC OXIDASE 5 (ACO5)"]
["AT4G23940","cyan","Encodes FtsHi1. Localizes to the chloroplast envelope membrane. Functions in chloroplast biogenesis and division.Strong interaction with TIC inner envelope protein translocon which consists of Tic20/Tic56/Tic100/Tic214(Ycf1)(DOI:10.1105/tpc.18.00357).","FTSH INACTIVE PROTEASE 1 (FTSHI1)","ACCUMULATION AND REPLICATION OF CHLOROPLASTS 1 (ARC1);FTSH INACTIVE PROTEASE 1 (FTSHI1)"]
["AT1G69040","cyan","ACT-domain containing protein involved in feedback regulation of amino acid metabolism","ACT DOMAIN REPEAT 4 (ACR4)","ACT DOMAIN REPEAT 4 (ACR4)"]
["AT1G49240","cyan","Member of a subclass of actins composed of ACT2 and ACT8. Its mRNA is strongly expressed in strongly expressed in leaves, roots, stems, flowers, pollen, and siliques. However, protein expression, assayed by a ACT8:GUS fusion reporter, is very low in pollen.","ACTIN 8 (ACT8)","ACTIN 8 (ACT8);FRIZZY AND KINKED SHOOTS (FIZ1)"]
["AT3G12110","cyan","Encodes an actin that is expressed predominantly during reproductive development.","ACTIN-11 (ACT11)","ACTIN-11 (ACT11)"]
["AT1G74500","cyan","Encodes a basic helix/loop/helix transcription factor that acts downstream of MP in root initiation. TMO7 protein moves to the hypophysis and to vascular cells, contributing to MP-dependent root formation. Promotes the correct definition of the hypophysis cell division plane.","ACTIVATION-TAGGED BRI1(BRASSINOSTEROID-INSENSITIVE 1)-SUPPRESSOR 1 (BS1)","ACTIVATION-TAGGED BRI1(BRASSINOSTEROID-INSENSITIVE 1)-SUPPRESSOR 1 (ATBS1);TARGET OF MONOPTEROS 7 (TMO7);ACTIVATION-TAGGED BRI1(BRASSINOSTEROID-INSENSITIVE 1)-SUPPRESSOR 1 (BS1);PACLOBUTRAZOL RESISTANCE 3 (PRE3);BASIC HELIX-LOOP-HELIX PROTEIN 135 (BHLH135)"]
["AT4G25050","cyan","Encodes an plastid acyl carrier protein predominantly expressed in leaves. Gene expression is upregulated by light.","ACYL CARRIER PROTEIN 4 (ACP4)","ACYL CARRIER PROTEIN 4 (ACP4); (ATACP4)"]
["AT2G37250","cyan","encodes adenylate kinase that is located in the chloroplast involved in the coordination of metabolism and growth","ADENOSINE KINASE (ADK)","ADENOSINE KINASE (ADK); (ATPADK1)"]
["AT5G03300","cyan","Encodes adenosine kinase 2 (ADK2), a typical, constitutively expressed housekeeping enzyme. Shows a high sequence identity with ADK1. Involved in salvage synthesis of adenylates and methyl recycling. Enzyme activity is substantially inhibited in roots, siliques and dry seeds by an unknown compound. May contribute to cytokinin interconversion. The mRNA is cell-to-cell mobile.","ADENOSINE KINASE 2 (ADK2)","ADENOSINE KINASE 2 (ADK2)"]
["AT4G39940","cyan","adenosine-5'-phosphosulfate-kinase (akn2) mRNA, complete The mRNA is cell-to-cell mobile.","APS-KINASE 2 (AKN2)","ADENOSINE-5'-PHOSPHOSULFATE (APS) KINASE 2 (APK2);APS-KINASE 2 (AKN2)"]
["AT5G63400","cyan","encodes a protein similar to adenylate kinase.","ADENYLATE KINASE 1 (ADK1)","ADENYLATE KINASE 1 (ADK1)"]
["AT3G08580","cyan","mitochondrial ADP/ATP carrier","ADP/ATP CARRIER 1 (AAC1)","ADP/ATP CARRIER 1 (AAC1)"]
["AT5G13490","cyan","Encodes mitochondrial ADP/ATP carrier","ADP/ATP CARRIER 2 (AAC2)","ADP/ATP CARRIER 2 (AAC2)"]
["AT1G27680","cyan","ADP-glucose pyrophosphorylase catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms of the large subunit (ApL1-4) have been described.Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions. The mRNA is cell-to-cell mobile.","ADPGLC-PPASE LARGE SUBUNIT (APL2)","ADPGLC-PPASE LARGE SUBUNIT (APL2)"]
["AT3G62290","cyan","A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. The mRNA is cell-to-cell mobile.","ADP-RIBOSYLATION FACTOR A1E (ARFA1E)","ADP-RIBOSYLATION FACTOR A1E (ATARFA1E);ADP-RIBOSYLATION FACTOR A1E (ARFA1E)"]
["AT1G29960","cyan","Peptidase S24/S26A/S26B/S26C family protein;(source:Araport11)",null,"AGAMOUS-LIKE 64 (AGL64)"]
["AT1G17290","cyan","Encodes for alanine aminotransferase (ALAAT1), involved in alanine catabolism during plants recovery from hypoxia The mRNA is cell-to-cell mobile.","ALANINE AMINOTRANSFERASE (AlaAT1)","ALANINE AMINOTRANSFERASE (AlaAT1)"]
["AT1G08520","cyan","Encodes the CHLD subunit of the Mg-chelatase enzyme involved in chlorophyll biosynthesis. Lines carrying recessive mutations of this locus are white and seedling lethal.","ALBINA 1 (ALB1)","ALBINA 1 (ALB1); (ALB-1V); (CHLD);PIGMENT DEFECTIVE EMBRYO 166 (PDE166); (V157)"]
["AT2G36230","cyan","Encodes a BBMII isomerase involved in histidine biosynthesis.","ALBINO AND PALE GREEN 10 (APG10)","ALBINO AND PALE GREEN 10 (APG10); (HISN3)"]
["AT2G01110","cyan","mutant is Albino and pale green; Chloroplast Protein Translocation (tatC). Core subunit of the chloroplast Tat translocase. Integral chloroplast thylakoid membrane protein.","ALBINO AND PALE GREEN 2 (APG2)","ALBINO AND PALE GREEN 2 (APG2);UNFERTILIZED EMBRYO SAC 3 (UNE3); (PGA2);TWIN-ARGININE TRANSLOCATION C (TATC)"]
["AT5G15450","cyan","Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype.","CASEIN LYTIC PROTEINASE B3 (CLPB3)","ALBINO AND PALE GREEN 6 (APG6); (ATCLPB3);CASEIN LYTIC PROTEINASE B-P (CLPB-P);CASEIN LYTIC PROTEINASE B3 (CLPB3)"]
["AT3G48170","cyan","ALDH10A9 encodes a protein that can function as a betaine aldehyde dehydrogenase in vitro. The C-terminal amino acids of this protein direct GFP to the peroxisome suggesting that ALDH10A9 accumulates in this organelle. ALDH10A9 transcript levels rise in response to ABA, NaCl, chilling, methyl viologen, and dehydration stress. The enzyme can catalyze the formation of glycine betaine in vitro, but there are still questions about whether Arabidopsis makes this protective compound under natural conditions. This enzyme may be involved in oxidizing aminoaldehydes formed through polyamine metabolism.","ALDEHYDE DEHYDROGENASE 10A9 (ALDH10A9)","ALDEHYDE DEHYDROGENASE 10A9 (ALDH10A9);BETAINE ALDEHYDE DEHYDROGENASE (BADH)"]
["AT3G43600","cyan","Encodes an aldehyde oxidase. AAO2 does not appear to act on abscisic aldehyde in vitro but it is possible that it may function in abscisic acid biosynthesis when the activity of At2g27150 (AAO3), the primary abscisic aldehyde oxidase, is lost.","ALDEHYDE OXIDASE 2 (AAO2)","ALDEHYDE OXIDASE 2 (AAO2);ALDEHYDE OXIDASE 3 (AO3);ARABIDOPSIS THALIANA ALDEHYDE OXIDASE 2 (atAO-2);ALDEHYDE OXIDASE GAMMA (AOgamma);ARABIDOPSIS THALIANA ALDEHYDE OXIDASE 3 (AtAO3)"]
["AT3G53880","cyan","NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11)","ALDO-KETO REDUCTASE FAMILY 4 MEMBER C11 (AKR4C11)","ALDO-KETO REDUCTASE FAMILY 4 MEMBER C11 (AKR4C11)"]
["AT4G34860","cyan","Plant neutral invertase family protein;(source:Araport11)","ALKALINE/NEUTRAL INVERTASE B (A/N-InvB)","ALKALINE/NEUTRAL INVERTASE B (A/N-InvB)"]
["AT1G23740","cyan","AOR is an alkenal/one oxidoreductase that acts on compounds with unsaturated alpha,beta-carbonyls. The activity of this enzyme with a number of substrates, including acrolein and 3-buten-2-one, was demonstrated in vitro using a truncated form of the protein that lacked approximately 80 of the first amino acids. This protein appears to localize to the chloroplast where it likely helps to maintain the photosynthetic process by detoxifying reactive carbonyls formed during lipid peroxidation.","ALKENAL/ONE OXIDOREDUCTASE (AOR)","ALKENAL/ONE OXIDOREDUCTASE (AOR)"]
["AT3G25770","cyan","Encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is induced during senescence, a process that involves jasmonic acid signalling pathway. Note: Nomenclature for Arabidopsis allene oxide cyclase 2 (AOC2, AT3G25770) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC2 (AT3G25770) is also referred to as AOC3 in He et al. 2002 Plant Physiology, 128:876-884. The mRNA is cell-to-cell mobile.","ALLENE OXIDE CYCLASE 2 (AOC2)","ALLENE OXIDE CYCLASE 2 (AOC2)"]
["AT1G13280","cyan","Encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is reduced during senescence, a process that involves jasmonic acid signalling pathway.","ALLENE OXIDE CYCLASE 4 (AOC4)","ALLENE OXIDE CYCLASE 4 (AOC4)"]
["AT5G42650","cyan","Encodes a member of the cytochrome p450 CYP74 gene family that functions as an allene oxide synthase. This enzyme catalyzes dehydration of the hydroperoxide to an unstable allene oxide in the JA biosynthetic pathway. It shows a dual catalytic activity, the major one being a 13-AOS but also expressing a 9-AOS activity. CFA-Leu, CFA-Val, CFA-Met and CFA-Ala can induce the expression of AOS.","ALLENE OXIDE SYNTHASE (AOS)","ALLENE OXIDE SYNTHASE (AOS);DELAYED DEHISCENCE 2 (DDE2);CYTOCHROME P450 74A (CYP74A)"]
["AT1G06460","cyan","ACD32.1 encodes an alpha-crystallin domain containing protein with homology to small heat shock proteins.","ALPHA-CRYSTALLIN DOMAIN 32.1 (ACD32.1)","ALPHA-CRYSTALLIN DOMAIN 31.2 (ACD31.2);ALPHA-CRYSTALLIN DOMAIN 32.1 (ACD32.1)"]
["AT5G08380","cyan","alpha-galactosidase 1;(source:Araport11)","ALPHA-GALACTOSIDASE 1 (AGAL1)","ALPHA-GALACTOSIDASE 1 (AtAGAL1);ALPHA-GALACTOSIDASE 1 (AGAL1)"]
["AT5G08370","cyan","Member of Glycoside Hydrolase Family 27 (GH27)that functions as an &#945;-galactosidase.","ALPHA-GALACTOSIDASE 2 (AGAL2)","ALPHA-GALACTOSIDASE 2 (AGAL2);ALPHA-GALACTOSIDASE 2 (AtAGAL2)"]
["AT5G11720","cyan","Glycosyl hydrolases family 31 protein;(source:Araport11)","ALPHA-GLUCOSIDASE (AGLU1)","ALPHA-GLUCOSIDASE (AGLU1)"]
["AT3G21160","cyan","Encodes an alpha-mannosidase I enzyme responsible for N-glycan maturation.","ALPHA-MANNOSIDASE 2 (MNS2)","ALPHA-MANNOSIDASE 2 (MNS2);ALPHA-MANNOSIDASE IA (MANIA)"]
["AT1G17500","cyan","ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein. ALA4 acts redundantly with ALA3, ALA5, ALA9, ALA10 and ALA11 in root and shoot development","AMINOPHOSPHOLIPID ATPASE 4 (ALA4)","AMINOPHOSPHOLIPID ATPASE 4 (ALA4)"]
["AT4G35450","cyan","A molecular chaperone that binds to the transmembrane domains of interacting proteins to prevent aggregation and direct them to the right location after translation.Involved in targeting of chloroplast outer membrane proteins to the chloroplast. Double mutants of AKR2A and the highly homologous AKR2B have yellow leaves, significantly reduced chloroplast proteins, and no thylakoid membranes.","ANKYRIN REPEAT-CONTAINING PROTEIN 2 (AKR2)","ANKYRIN REPEAT-CONTAINING PROTEIN 2 (AKR2)"]
["AT1G35720","cyan","Encodes a member of the annexin gene family, a diverse, multigene family of calcium-dependent, membrane-binding proteins. The protein was determined to have peroxidase activity. This activity is thought to be dependent on the presence of post-translational modifications (most likely phosphorylation). The protein was shown to be present as a mixture of monomer and homodimer. The homodimerization seems to be dependent on the presence of Ca2+ or H2O2. The dimerization was prevented by the addition of DTT, &#946;-mercaptoethanol and TCEP. Annat1 mRNA is expressed in flowers, roots,leaves and stems and is most abundant in stems. mRNA levels are increased in response to oxidative stress. Developmental expression patterns suggest a role in Golgi-mediated polysaccharide secretion. It is a Ca 2+-permeable transporter providing a molecular link between reactive oxygen species and cytosolic Ca 2+ in plants. The mRNA is cell-to-cell mobile.","ANNEXIN 1 (ANNAT1)","ANNEXIN 1 (ANNAT1); (OXY5); (ATOXY5);ANNEXIN 1 (ANN1); (ATANN1)"]
["AT5G05730","cyan","ASA1 encodes the alpha subunit of anthranilate synthase, which catalyzes the rate-limiting step of tryptophan synthesis. ASA1 is induced by ethylene, and forms a link between ethylene signalling and auxin synthesis in roots.","ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1 (ASA1)","ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1 (ASA1)"]
["AT2G21120","cyan","Encodes a putative magnesium transporter that was identified through a forward genetic screen, directly isolating antiviral RNAi-defective (avi) mutant using a Cucumber Mosaic Virus (CMV) mutant. Compared to Wildtype Col-0, avi2 mutant showed severe disease symptom after viral infection and viral accumulation was significantly increased while viral siRNAs and virus-activated endogenous siRNAs (vasiRNAs) were reduced in avi2 mutant. Detailed genetic study indicated that AVI2 modulated RNAi-mediated antiviral immunity by regulating the biogenesis of secondary viral siRNAs and vasiRNAs in Arabidopsis.","ANTIVIRAL RNAI-DEFECTIVE 2 (AVI2)","ANTIVIRAL RNAI-DEFECTIVE 2 (AVI2);ENHANCER OF RDR6 3 (ENOR3)"]
["AT1G21710","cyan","Encodes 8-oxoguanine-DNA glycosylase. DNA repair enzyme.","8-OXOGUANINE-DNA GLYCOSYLASE 1 (OGG1)","ARABIDOPSIS 8-OXOGUANINE-DNA GLYCOSYLASE 1 (ATOGG1);8-OXOGUANINE-DNA GLYCOSYLASE 1 (OGG1)"]
["AT2G31270","cyan","Encodes a cyclin-dependent protein kinase. Involved in nuclear DNA replication and plastid division. Located in nucleus and chloroplast.","HOMOLOG OF YEAST CDT1 A (CDT1A)","ARABIDOPSIS HOMOLOG OF YEAST CDT1 A (ATCDT1A);HOMOLOG OF YEAST CDT1 A (CDT1A);ARABIDOPSIS HOMOLOG OF YEAST CDT1 (CDT1)"]
["AT4G38800","cyan","Encodes one of the 5'-methylthioadenosine nucleosidases (AT4G38800/MTN1; AT4G34840/MTN2). Double mutant, mtn1-1mtn2-1, retains approximately 14% of the MTN enzyme activity present in the wild type and displays a pleiotropic phenotype that includes altered vasculature and impaired fertility.","METHYLTHIOADENOSINE NUCLEOSIDASE 1 (MTN1)","ARABIDOPSIS METHYLTHIOADENOSINE NUCLEOSIDASE 1 (ATMTN1);ARABIDOPSIS METHYLTHIOADENOSINE NUCLEOSIDASE 1 (ATMTAN1);METHYLTHIOADENOSINE NUCLEOSIDASE 1 (MTN1);METHYLTHIOADENOSINE NUCLEOSIDASE 1 (MTAN1)"]
["AT2G27300","cyan","NTL8 is a membrane-associated NAC transcription factor that binds both TRY and TCL1. Overexpression results in fewer trichomes.","NTM1-LIKE 8 (NTL8)","ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 40 (ANAC040);NTM1-LIKE 8 (NTL8)"]
["AT5G40730","cyan","Encodes an arabinogalactan-protein (AGP24).","ARABINOGALACTAN PROTEIN 24 (AGP24)","ARABIDOPSIS THALIANA ARABINOGALACTAN PROTEIN 24 (ATAGP24);ARABINOGALACTAN PROTEIN 24 (AGP24)"]
["AT5G63810","cyan","member of Glycoside Hydrolase Family 35","BETA-GALACTOSIDASE 10 (BGAL10)","ARABIDOPSIS THALIANA BETA-GALACTOSIDASE 10 (ATBGAL10);BETA-GALACTOSIDASE 10 (BGAL10)"]
["AT2G30870","cyan","early dehydration-induced gene ERD13 homologous to tobacco and maize glutathione S-transferases. Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002)","GLUTATHIONE S-TRANSFERASE PHI 10 (GSTF10)","ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 10 (ATGSTF10); (ATGSTF4);EARLY DEHYDRATION-INDUCED 13 (ERD13);GLUTATHIONE S-TRANSFERASE PHI 10 (GSTF10)"]
["AT5G17220","cyan","Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). Mutants display no pigments on leaves and stems. Likely to function as a carrier to transport anthocyanin from the cytosol to tonoplasts.","GLUTATHIONE S-TRANSFERASE PHI 12 (GSTF12)","ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 12 (ATGSTF12);GLUTATHIONE S-TRANSFERASE PHI 12 (GSTF12);TRANSPARENT TESTA 19 (TT19);GLUTATHIONE S-TRANSFERASE 26 (GST26)"]
["AT4G29130","cyan","Encodes a hexokinase (HXK1) in the plant glucose-signaling network. Functions as a glucose sensor to interrelate nutrient, light, and hormone signaling networks for controlling growth and development in response to the changing environment.","HEXOKINASE 1 (HXK1)","ARABIDOPSIS THALIANA HEXOKINASE 1 (ATHXK1);GLUCOSE INSENSITIVE 2 (GIN2);HEXOKINASE 1 (HXK1)"]
["AT3G54110","cyan","Member of Uncoupling protein PUMP2 family. Encodes a mitochondrial uncoupling protein AtUCP1 involved in maintain the redox poise of the mitochondrial electron transport chain to facilitate photosynthetic metabolism. Disruption of UCP1 results in a photosynthetic phenotype. Specifically there is a restriction in photorespiration with a decrease in the rate of oxidation of photorespiratory glycine in the mitochondrion. This change leads to an associated reduced photosynthetic carbon assimilation rate. The mRNA is cell-to-cell mobile.","PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1 (PUMP1)","ARABIDOPSIS THALIANA PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1 (ATPUMP1);UNCOUPLING PROTEIN 1 (UCP1); (UCP);ARABIDOPSIS THALIANA UNCOUPLING PROTEIN 1 (ATUCP1);PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1 (PUMP1)"]
["AT4G16570","cyan","protein arginine methyltransferase 7;(source:Araport11)","PROTEIN ARGININE METHYLTRANSFERASE 7 (PRMT7)","ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 7 (ATPRMT7);PROTEIN ARGININE METHYLTRANSFERASE 7 (PRMT7)"]
["AT2G39460","cyan","Encodes a 60S ribosomal protein L23aA (AtrpL23aA). Paralog of RLPL23aB.","RIBOSOMAL PROTEIN L23AA (RPL23AA)","ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN L23A (ATRPL23A);RIBOSOMAL PROTEIN L23A (RPL23A);RIBOSOMAL PROTEIN L23AA (RPL23AA);RIBOSOMAL PROTEIN L23A1 (RPL23A1);RIBOSOMAL PROTEIN UL23Z (UL23Z)"]
["AT3G26900","cyan","Encodes a protein with some sequence similarity to shikimate kinases, but a truncated form of this protein (lacking a putative N-terminal chloroplast transit peptide) does not have shikimate kinase activity in vitro. skl1-3 mutants have a variegated phenotype and skl1-8 mutants have an albino phenotype consistent with the observation of chloroplast defects in these mutants.","SHIKIMATE KINASE-LIKE 1 (SKL1)","ARABIDOPSIS THALIANA SHIKIMATE KINASE-LIKE 1 (ATSKL1);SHIKIMATE KINASE-LIKE 1 (SKL1)"]
["AT5G57490","cyan","Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol.","VOLTAGE DEPENDENT ANION CHANNEL 4 (VDAC4)","ARABIDOPSIS THALIANA VOLTAGE DEPENDENT ANION CHANNEL 4 (ATVDAC4);VOLTAGE DEPENDENT ANION CHANNEL 4 (VDAC4)"]
["AT5G14100","cyan","Member of NAP subfamily. Putative component of chloroplast ECF/ABC-Transporter involved in metal homeostasis.","ATP-BINDING CASSETTE I11 (ABCI11)","ARABIDOPSIS THALIANANON-INTRINSIC ABC PROTEIN 14 (ATNAP14);ATP-BINDING CASSETTE I11 (ABCI11);NON-INTRINSIC ABC PROTEIN 14 (NAP14)"]
["AT2G17730","cyan","Intrinsic thylakoid membrane protein that fixes RPOTmp on the stromal side of the thylakoid membrane.","NEP-INTERACTING PROTEIN 2 (NIP2)","ARABIDOPSIS TOXICOS EN LEVADURA 25 (ATL25);NEP-INTERACTING PROTEIN 2 (NIP2)"]
["AT2G31650","cyan","Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Involved in trimethylating histone H3-lysine 4. Involved in bolting/flowering time together with ATX3 and ATX4. Involved in the formation, placement, and identity of flower organs. Role in regulation of homeotic genes. Functions as a receptor of phosphatidylinositol 5-phosphate. Localizes to cytoplasm, plasma membrane and nuclei, shifting to nuclei in the presence of PI5P.","ARABIDOPSIS TRITHORAX 1 (ATX1)","ARABIDOPSIS TRITHORAX 1 (ATX1);SET DOMAIN PROTEIN 27 (SDG27)"]
["AT2G46330","cyan","Encodes arabinogalactan protein (AGP16).","ARABINOGALACTAN PROTEIN 16 (AGP16)","ARABINOGALACTAN PROTEIN 16 (AGP16); (ATAGP16)"]
["AT1G28290","cyan","Encodes an atypical arabinogalactan protein that is localized to the plasma membrange. AGP31 is highly expressed in flowers and vascular tissue and is repressed by jasmonic acid. AGP31 may play a role in vascular tissue function during defense and development.","ARABINOGALACTAN PROTEIN 31 (AGP31)","ARABINOGALACTAN PROTEIN 31 (AGP31)"]
["AT5G10430","cyan","Encodes arabinogalactan-protein (AGP4) that is expressed in female reproductive tissues. It is involved in promoting degeneration of the persistent synergid after fertilization. In mutant ovules, the persistent synergid does not degrade resulting in polytuby.","ARABINOGALACTAN PROTEIN 4 (AGP4)","ARABINOGALACTAN PROTEIN 4 (AGP4); (ATAGP4); (JAGGER)"]
["AT4G08870","cyan","Encodes one of the two arginase in the genome. Gene expression is enhanced by methyl jasmonate treatment. It is involved in the defense response to B.cinerea.","ARGININE AMIDOHYDROLASE 2 (ARGAH2)","ARGININE AMIDOHYDROLASE 2 (ARGAH2)"]
["AT4G35000","cyan","Encodes a microsomal ascorbate peroxidase APX3. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. The APX3 protein interacts with AKR2 (ankyrin-containing protein that interacts with AFT1) and AFT1, a 14-3-3 protein.","ASCORBATE PEROXIDASE 3 (APX3)","ASCORBATE PEROXIDASE 3 (APX3)"]
["AT3G16150","cyan","Encodes an asparaginase that catalyzes the degradation of L-asparagine to L-aspartic acid and ammonia. The mRNA is cell-to-cell mobile.","ASPARAGINASE B1 (ASPGB1)","ASPARAGINASE B1 (ASPGB1)"]
["AT5G10240","cyan","Encodes asparagine synthetase (ASN3).","ASPARAGINE SYNTHETASE 3 (ASN3)","ASPARAGINE SYNTHETASE 3 (ASN3)"]
["AT4G31990","cyan","Encodes a plastid-localized aspartate aminotransferase. Does not display any PAT (glutamate/aspartate-prephenate aminotransferase) activity even in the presence of a high concentration of prephenate.","ASPARTATE AMINOTRANSFERASE 5 (ASP5)","ASPARTATE AMINOTRANSFERASE 5 (ASP5);ASPARTATE AMINOTRANSFERASE DEFICIENT 3 (AAT3); (ATAAT1)"]
["AT5G14920","cyan","Encodes a GASA domain containing protein that regulates increases in plant growth through GA-induced and DELLA-dependent signal transduction and that can increase abiotic stress resistance by reducing ROS accumulation.","A-STIMULATED IN ARABIDOPSIS 14 (GASA14)","A-STIMULATED IN ARABIDOPSIS 14 (GASA14)"]
["AT2G45490","cyan","Encodes a member of a family of Ser/Thr kinases whose activities peak during cell division. Transcripts are abundant in tissues rich in dividing cells like roots and flowers but are low or absent in fully expanded leaves and stems. In interphase cells, the protein is predominantly nuclear. During mitosis, the protein associates with plant-specific cytoskeletal structures (preprophase band, phragmoplast, nascent cell plate) that are necessary for cytokinesis as well as with the microtubule spindle. The protein is concentrated in nuclear dots arranged around the nucleolus and the nuclear periphery in early prophase cells.","ATAURORA3 (AUR3)","ATAURORA3 (AtAUR3);ATAURORA3 (AUR3)"]
["AT4G22810","cyan","Putative AT-hook DNA-binding family protein;(source:Araport11)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 24 (AHL24)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 24 (AHL24)"]
["AT4G00200","cyan","AT hook motif DNA-binding family protein;(source:Araport11)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 7 (AHL7)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 7 (AHL7)"]
["AT3G52300","cyan","ATP synthase D chain;(source:Araport11)","ATP SYNTHASE D CHAIN, MITOCHONDRIAL (ATPQ)","ATP SYNTHASE D CHAIN, MITOCHONDRIAL (ATPQ); (ATPD)"]
["AT1G35680","cyan","Encodes a chloroplast ribosomal protein L21 that is required for chloroplast development and embryogenesis. The mRNA is cell-to-cell mobile.","CHLOROPLAST RIBOSOMAL PROTEIN L21 (RPL21C)","ATPASE-IN-SEED-DEVELOPMENT (ASD);CHLOROPLAST RIBOSOMAL PROTEIN L21 (RPL21C);RIBOSOMAL PROTEIN BL21C (BL21C)"]
["AT1G54350","cyan","ABC transporter family protein;(source:Araport11)","ATP-BINDING CASSETTE D2 (ABCD2)","ATP-BINDING CASSETTE D2 (ABCD2)"]
["AT1G32500","cyan","Encodes a member of a heterogenous group of non-intrinsic ATP-binding cassette (ABC) proteins. Members of this group bear no close resemblance to each other nor to representatives of specific ABC protein subfamilies from other organisms. This grouping is arbitrary and will likely change upon acquisition of further data.","ATP-BINDING CASSETTE I7 (ABCI7)","ATP-BINDING CASSETTE I7 (ABCI7);NON-INTRINSIC ABC PROTEIN 6 (NAP6);NON-INTRINSIC ABC PROTEIN 6 (ATNAP6)"]
["AT1G27770","cyan","Encodes a chloroplast envelope Ca2+-ATPase with an N-terminal autoinhibitor.","AUTOINHIBITED CA2+-ATPASE 1 (ACA1)","AUTOINHIBITED CA2+-ATPASE 1 (ACA1);PLASTID ENVELOPE ATPASE 1 (PEA1)"]
["AT2G04160","cyan","isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein similar to subtilisin-like serine protease which is believed to be active outside the plant cell.","AUXIN-INDUCED IN ROOT CULTURES 3 (AIR3)","AUXIN-INDUCED IN ROOT CULTURES 3 (AIR3)"]
["AT1G51070","cyan","bHLH115 is a basic helix loop helix protein of the IVc subgroup that plays a role in iron homeostasis. It interacts with related family members and targets PYE and other genes involved in response to Fe.","BASIC HELIX-LOOP-HELIX 115 (bHLH115)","BASIC HELIX-LOOP-HELIX 115 (bHLH115)"]
["AT4G26400","cyan","RING/U-box superfamily protein;(source:Araport11)","BCA2A ZINC FINGER ATL 5 (BTL05)","BCA2A ZINC FINGER ATL 5 (BTL05)"]
["AT1G70410","cyan","Encodes a putative beta-carbonic anhydrase betaCA4. Together with betaCA1 (At3g01500) regulates CO2-controlled stomatal movements in guard cells, as well as attenuates immunity. Differential CA gene expression in response to changing atmospheric CO2 conditions contribute to altered disease resistance levels.","BETA CARBONIC ANHYDRASE 4 (BCA4)","BETA CARBONIC ANHYDRASE 4 (ATBCA4);BETA CARBONIC ANHYDRASE 4 (BCA4)"]
["AT5G25980","cyan","Myrosinase (thioglucoside glucohydrolase) gene involved in glucosinoloate metabolism. The mRNA is cell-to-cell mobile.","GLUCOSIDE GLUCOHYDROLASE 2 (TGG2)","BETA GLUCOSIDASE 37 (BGLU37);GLUCOSIDE GLUCOHYDROLASE 2 (TGG2)"]
["AT1G60090","cyan","beta glucosidase 4;(source:Araport11)","BETA GLUCOSIDASE 4 (BGLU4)","BETA GLUCOSIDASE 4 (BGLU4)"]
["AT1G52400","cyan","encodes a member of glycosyl hydrolase family 1, located in inducible ER bodies which were formed after wounding, required in inducible ER body formation The mRNA is cell-to-cell mobile.","BETA GLUCOSIDASE 18 (BGLU18)","BETA-GLUCOSIDASE HOMOLOG 1 (BGL1);BETA GLUCOSIDASE 18 (BGLU18);A. THALIANA BETA-GLUCOSIDASE 1 (ATBG1)"]
["AT5G65940","cyan","hydrolyzes beta-hydroxyisobutyryl-CoA","BETA-HYDROXYISOBUTYRYL-COA HYDROLASE 1 (chy1)","BETA-HYDROXYISOBUTYRYL-COA HYDROLASE 1 (chy1)"]
["AT1G02640","cyan","encodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members.","BETA-XYLOSIDASE 2 (BXL2)","BETA-XYLOSIDASE 2 (ATBXL2);BETA-XYLOSIDASE 2 (BXL2)"]
["AT3G29185","cyan","Encodes a chloroplast protein that interacts with the CF1&#946;, &#947;, and &#949; subunits of the chloroplast ATP synthase and is required for assembly of its F1 module. The protein is comprised primarily of two &#946;-barrels and acts as a chaperone orchestrating the early steps of the CF1 assembly pathway via specific interaction with the CF1 &#946;, &#947;, and &#949; subunits.","BIOGENESIS FACTOR REQUIRED FOR ATP SYNTHASE 1 (BFA1)","BIOGENESIS FACTOR REQUIRED FOR ATP SYNTHASE 1 (BFA1)"]
["AT5G02820","cyan","Involved in the patterning and shape of leaf trichomes. Encodes the DNA topoisomerase VI SPO11-3, involved in endoreduplication","ROOT HAIRLESS 2 (RHL2)","BRASSINOSTEROID INSENSITIVE 5 (BIN5);ROOT HAIRLESS 2 (RHL2)"]
["AT5G01630","cyan","Ortholog of breast cancer susceptibility protein 2. Essential at meiosis. Interacts with with both Rad51 and Dss1(I) or both Dmc1 and Dss1(I) in a tripartite complex.","BRCA2-LIKE B (BRCA2B)","BRCA2-LIKE B (BRCA2B); (ATBRCA2(V)); (BRCA2(V))"]
["AT3G49010","cyan","Encodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1).","BREAST BASIC CONSERVED 1 (BBC1)","BREAST BASIC CONSERVED 1 (BBC1);RIBOSOMAL PROTEIN EL13Z (EL13Z);40S RIBOSOMAL PROTEIN (RSU2);BREAST BASIC CONSERVED 1 (ATBBC1)"]
["AT1G18910","cyan","E3 ubiquitin ligase that functions redundantly in the root with BTSL1 to negatively regulate iron uptake.","BRUTUS LIKE 2 (BTSL2)","BRUTUS LIKE 2 (BTSL2)"]
["AT3G47650","cyan","DnaJ/Hsp40 cysteine-rich domain superfamily protein;(source:Araport11)","BUNDLE SHEATH DEFECTIVE 2 (BSD2)","BUNDLE SHEATH DEFECTIVE 2 (BSD2)"]
["AT2G01540","cyan","C2 domain protein.","C2-DOMAIN ABA-RELATED 10 (CAR10)","C2-DOMAIN ABA-RELATED 10 (CAR10)"]
["AT5G44070","cyan","Phytochelatin synthase gene confers tolerance to cadmium ions. Catalyzes phytochelatin (PC) synthesis from glutathione (GSH) in the presence of Cd2+, Zn2+, Cu2+ and Fe3+, but not by Co2+ or Ni2+. The mRNA is cell-to-cell mobile.","CADMIUM SENSITIVE 1 (CAD1)","CADMIUM SENSITIVE 1 (CAD1); (ARA8);ARABIDOPSIS THALIANA PHYTOCHELATIN SYNTHASE 1 (ATPCS1);PHYTOCHELATIN SYNTHASE 1 (PCS1)"]
["AT3G25600","cyan","Calmodulin like protein. Paralog of CML15.","CALMODULIN LIKE 16 (CML16)","CALMODULIN LIKE 16 (CML16)"]
["AT5G44460","cyan","Calcium sensor.","CALMODULIN LIKE 43 (CML43)","CALMODULIN LIKE 43 (CML43)"]
["AT3G10660","cyan","predicted to encode calcium-dependent protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal, to A prevented the meristoylation . The G to A mutation decreased AtCPK2 membrane association by approximately 50%.","CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2 (CPK2)","CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2 (CPK2); (ATCPK2)"]
["AT3G10190","cyan","Encodes a protein with sequence similarity to calmodulins. Loss of function mutations have decreased response to chitin elicitors suggesting a role in plant response to fungal pathogens.","CALMODULIN-LIKE 36 (CML36)","CALMODULIN-LIKE 36 (CML36)"]
["AT5G49760","cyan","Leucine rich receptor kinase. Encodes a receptor of extracellular reactive oxygen species.","(HPCA1)","CANNOT RESPOND TO DMBQ 1 (CARD1); (HPCA1)"]
["AT3G48700","cyan","carboxyesterase 13;(source:Araport11)","CARBOXYESTERASE 13 (CXE13)","CARBOXYESTERASE 13 (ATCXE13);CARBOXYESTERASE 13 (CXE13)"]
["ATCG00670","cyan","Encodes the only ClpP (caseinolytic protease) encoded within the plastid genome. Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). Part of the 350 kDa chloroplast Clp complex. The name reflects nomenclature described in Adam et. al (2001).","PLASTID-ENCODED CLP P (PCLPP)","CASEINOLYTIC PROTEASE P 1 (CLPP1);PLASTID-ENCODED CLP P (PCLPP)"]
["AT2G38170","cyan","Encodes a high affinity vacuolar calcium antiporter. The residue His 338 is critical to Ca2+ transport activity. Disruption of CAX1 reduces manganese and zinc of shoot tissue and results in a decrease in the activity of vacuolar V-type proton ATPase.","CATION EXCHANGER 1 (CAX1)","CATION EXCHANGER 1 (CAX1); (ATCAX1);RARE COLD INDUCIBLE 4 (RCI4)"]
["AT1G29880","cyan","glycyl-tRNA synthetase / glycine-tRNA ligase;(source:Araport11)",null,"CELLULOSE SYNTHASE LIKE C12 (CLSC12)"]
["AT3G03050","cyan","encodes a cellulose synthase like protein. mutations initiate root hairs that rupture at their tip soon after initiation. is required for the synthesis of a noncellulosic wall polysaccharide.","CELLULOSE SYNTHASE-LIKE D3 (CSLD3)","CELLULOSE SYNTHASE-LIKE D3 (CSLD3);KOJAK (KJK);CELLULOSE SYNTHASE LIKE D3 (ATCSLD3);ROOT HAIR DEFECTIVE 7 (RHD7)"]
["AT3G28180","cyan","encodes a gene similar to cellulose synthase The mRNA is cell-to-cell mobile.","CELLULOSE-SYNTHASE-LIKE C4 (CSLC04)","CELLULOSE-SYNTHASE LIKE C4 (CSLC4); (ATCSLC4);CELLULOSE-SYNTHASE-LIKE C4 (ATCSLC04); (CSLC04);CELLULOSE-SYNTHASE-LIKE C4 (CSLC04)"]
["AT3G03960","cyan","TCP-1/cpn60 chaperonin family protein;(source:Araport11)","CHAPERONIN CONTAINING T-COMPLEX POLYPEPTIDE-1 SUBUNIT 8 (CCT8)","CHAPERONIN CONTAINING T-COMPLEX POLYPEPTIDE-1 SUBUNIT 8 (CCT8)"]
["AT5G40890","cyan","Encodes a member of the voltage-dependent chloride channel. Also functions as a NO3-/H+ exchanger that serves to accumulate nitrate nutrient in vacuoles. Mutants homozygous for the T-DNA insertion mutation have reduced nitrate uptake capacity in high nitrate environment and exhibit hypersensitivity to chlorate. Role in cytosolic pH homeostasis.","CHLORIDE CHANNEL A (CLC-A)","CHLORIDE CHANNEL A (ATCLC-A);CHLORIDE CHANNEL-A (CLC-A);CHLORIDE CHANNEL A (CLC-A); (ATCLCA);CHLORIDE CHANNEL A (CLCA)"]
["AT2G44650","cyan","Encodes a chloroplast-localized chaperonin 10 whose mRNA is expressed in leaves and stems but not roots.","CHLOROPLAST CHAPERONIN 10 (CHL-CPN10)","CHLOROPLAST CHAPERONIN 10 (CHL-CPN10);CHLOROPLAST CHAPERONIN 10 (CPN10)"]
["AT1G36390","cyan","Chloroplast GrpE protein.","CHLOROPLAST GRPE 2 (CGE2)","CHLOROPLAST GRPE 2 (CGE2); (CGE-2)"]
["AT2G20270","cyan","Thioredoxin superfamily protein;(source:Araport11)","CHLOROPLAST GRX 12 (GRXS12)","CHLOROPLAST GRX 12 (GRXS12)"]
["AT5G49910","cyan","Stromal heat shock protein involved in protein import into chloroplast. The mRNA is cell-to-cell mobile.","CHLOROPLAST HEAT SHOCK PROTEIN 70-2 (cpHsc70-2)","CHLOROPLAST HEAT SHOCK PROTEIN 70-2 (CPHSC70-2EAT SHOCK PROTEIN 70-2);HEAT SHOCK PROTEIN 70-7 (HSP70-7);CHLOROPLAST HEAT SHOCK PROTEIN 70-2 (cpHsc70-2);HEAT SHOCK PROTEIN 70-7 (HSC70-7)"]
["AT5G57180","cyan","Transcription regulator responsible for specific upregulation of the translocon genes atToc33 and atToc75 in leaves. Involved in protein import into chloroplast.","CHLOROPLAST IMPORT APPARATUS 2 (CIA2)","CHLOROPLAST IMPORT APPARATUS 2 (CIA2)"]
["AT1G08640","cyan","Encodes a choloroplast membrane protein CJD1 (Chloroplast J-like Domain 1). Predicted to contain a transit peptide, three transmembrane domains and an N-terminal J-like domain. Influences fatty acid composition of chloroplast lipids.","CHLOROPLAST J-LIKE DOMAIN 1 (CJD1)","CHLOROPLAST J-LIKE DOMAIN 1 (CJD1)"]
["AT4G13590","cyan","Chloroplast manganese transporter required for chloroplast manganese homeostasis and photosynthetic function.","BIVALENT CATION TRANSPORTER 2 (BICAT2)","CHLOROPLAST MANGANESE TRANSPORTER1 (CMT1);BIVALENT CATION TRANSPORTER 2 (BICAT2)"]
["AT5G10910","cyan","Plastid rRNA methyltransferase involved in ribosome biogenesis and plant development. Accounts to the N4-methylation of C1352 in chloroplast 16S rRNA.","CHLOROPLAST MRAW-LIKE (CMAL)","CHLOROPLAST MRAW-LIKE (CMAL)"]
["AT4G35080","cyan","Encodes a nuclear-encoded chloroplast protein that plays an important role in vegetative growth, female gametogenesis, and embryogenesis likely by mediating chloroplast integrity and development.","CHLOROPLAST PROTEIN FOR GROWTH AND FERTILITY 1 (CGF1)","CHLOROPLAST PROTEIN FOR GROWTH AND FERTILITY 1 (CGF1)"]
["AT5G44650","cyan","Encodes a nucleus-encoded thylakoid protein, cooperates with the plastid-encoded Ycf3 protein in photosystem i assembly. Also induces tolerance to multiple environmental stresses and reduces photooxidative damage.","CHLOROPLAST PROTEIN-ENHANCING STRESS TOLERANCE (CEST)","CHLOROPLAST PROTEIN-ENHANCING STRESS TOLERANCE (CEST);YCF3-INTERACTING PROTEIN 1 (Y3IP1);ARABIDOPSIS THALIANA CHLOROPLAST PROTEIN-ENHANCING STRESS TOLERANCE (AtCEST)"]
["AT1G01080","cyan","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)","CHLOROPLAST RNA BINDING PROTEIN 28B (CP28B)","CHLOROPLAST RNA BINDING PROTEIN 28B (CP28B)"]
["AT3G52380","cyan","Encodes a chloroplast RNA-binding protein that stabilizes chloroplast RNAs as evidenced by analyses of transcript accumulation in null mutants. Essential for seedling development (albino, strongly retarded growth even on sucrose-containing medium).","CHLOROPLAST RNA BINDING PROTEIN 33A (CP33A)","CHLOROPLAST RNA-BINDING PROTEIN 33 (CP33);PIGMENT DEFECTIVE 322 (PDE322);CHLOROPLAST RNA BINDING PROTEIN 33A (CP33A)"]
["AT1G67840","cyan","Encodes a chloroplast sensor kinase (CSK) that shares common ancestors with cyanobacterial histidine sensor kinases. CSK is synthesised in the cytosol and imported into the chloroplast as a protein precusor. CSK is autophosphorylated and required for control of transcription of chloroplast genes by the redox state of an electron carrier connecting photosystems I and II.","CHLOROPLAST SENSOR KINASE (CSK)","CHLOROPLAST SENSOR KINASE (CSK)"]
["AT2G47450","cyan","A component of the chloroplast signal recognition particle pathway that is involved in LHCP targeting. It is downregulated in response to high light. It recognizes the DPLG motif in Lhcb1. The mRNA is cell-to-cell mobile.","CHAOS (CAO)","CHLOROPLAST SIGNAL RECOGNITION PARTICLE 43 (CPSRP43);CHAOS (CAO)"]
["AT3G63140","cyan","Encodes a protein with ribonuclease activity that is involved in plastid rRNA maturation.","CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA (CSP41A)","CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA (CSP41A)"]
["AT5G52100","cyan","Is essential for chloroplast NAD(P)H dehydrogenase activity, which is involved in electron transfer between PSII and PSI. Likely functions in biogenesis or stabilization of the NAD(P)H dehydrogenase complex. The mRNA is cell-to-cell mobile.","CHLORORESPIRATION REDUCTION 1 (crr1)","CHLORORESPIRATION REDUCTION 1 (crr1)"]
["AT2G01590","cyan","Likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located in the membrane fraction of chloroplast. Mutant has impaired NAD(P)H dehydrogenase activity.","CHLORORESPIRATORY REDUCTION 3 (CRR3)","CHLORORESPIRATORY REDUCTION 3 (CRR3)"]
["AT1G51100","cyan","Chloroplast NADH dehydrogenase assembly protein. Mutants are defective in the accumulation of subcomplex A.","CHLORORESPIRATORY REDUCTION 41 (CRR41)","CHLORORESPIRATORY REDUCTION 41 (CRR41)"]
["AT5G39210","cyan","Encodes a protein of the chloroplastic NAD(P)H dehydrogenase complex (NDH Complex) involved in respiration, photosystem I (PSI) cyclic electron transport and CO2 uptake. The product of this gene appears to be essential for the stable formation of the NDH Complex. The mRNA is cell-to-cell mobile.","CHLORORESPIRATORY REDUCTION 7 (CRR7)","CHLORORESPIRATORY REDUCTION 7 (CRR7)"]
["AT1G69770","cyan","Encodes a chromomethylase involved in methylating cytosine residues at non-CG sites. Involved in preferentially methylating transposon-related sequences, reducing their mobility. CMT3 interacts with an Arabidopsis homologue of HP1 (heterochromatin protein 1), which in turn interacts with methylated histones. Involved in gene silencing.","CHROMOMETHYLASE 3 (CMT3)","CHROMOMETHYLASE 3 (CMT3)"]
["AT1G04730","cyan","Necessary for sister chromatid cohesion. Acts in synergy with ETG1.","CHROMOSOME TRANSMISSION FIDELITY 18 (CTF18)","CHROMOSOME TRANSMISSION FIDELITY 18 (CTF18)"]
["AT3G23690","cyan","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)","CIB1 LIKE PROTEIN 2 (CIL2)","CIB1 LIKE PROTEIN 2 (CIL2)"]
["AT2G16060","cyan","Encodes a class 1 nonsymbiotic hemoglobin induced by low oxygen levels with very high oxygen affinity. It is not likely to be a hemoglobin transporter because of its extremely high affinity for oxygen. Overexpression impairs cold stress-induced nitric oxide (NO) production.","HEMOGLOBIN 1 (HB1)","CLASS I HEMOGLOBIN (GLB1);HEMOGLOBIN 1 (AHB1); (ARATH GLB1); (NSHB1); (ATGLB1);HEMOGLOBIN 1 (HB1);PHYTOGLOBIN 1 (PGB1)"]
["AT1G75820","cyan","Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain.","CLAVATA 1 (CLV1)","CLAVATA 1 (CLV1); (ATCLV1);FLOWER DEVELOPMENT 5 (FLO5);FASCIATA 3 (FAS3)"]
["AT5G45780","cyan","Encodes one of a group of LRR-RLKs, designated as CLAVATA3 INSENSITIVE RECEPTOR KINASES (CIKs), that act as co-receptors and have essential roles in regulating CLV3-mediated stem cell homeostasis.","CLAVATA3 INSENSITIVE RECEPTOR KINASE 4 (CIK4)","CLAVATA3 INSENSITIVE RECEPTOR KINASE 4 (CIK4)"]
["AT3G28455","cyan","Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Can not replace CLV3 function in vivo.CLE25 participates in long distance signaling in response to dehydration. It produces a graft transmissible signal from root to shoot that induces ABA synthesis and results in stomatal closure. The BAM1 and BAM3 receptor-kinases are likely receptors for CLE25 as they are required for this signaling.","CLAVATA3/ESR-RELATED 25 (CLE25)","CLAVATA3/ESR-RELATED 25 (CLE25)"]
["AT1G11750","cyan","One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).","CLP PROTEASE PROTEOLYTIC SUBUNIT 6 (CLPP6)","CLP PROTEASE PROTEOLYTIC SUBUNIT 6 (CLPP6)"]
["AT4G17040","cyan","HON5 (At4g17040) encodes the ClpR4 subunit of the chloroplast-localized Clp protease complex. hon mutations disturb plastid protein homeostasis, thereby activating plastid signaling and inducing stress acclimatization.","CLP PROTEASE R SUBUNIT 4 (CLPR4)","CLP PROTEASE R SUBUNIT 4 (CLPR4);HAPPY ON NORFLURAZON 5 (HON5)"]
["AT1G76730","cyan","Encodes a paralog of ATP-dependent folate salvage enzyme 5-formyltetrahydrofolate cycloligase (5-FCL) that is targeted to chloroplasts and to be required for embryo viability and lacks 5-FCL activity.","CLUSTERS OF ORTHOLOGOUS GROUP 212 (COG0212)","CLUSTERS OF ORTHOLOGOUS GROUP 212 (COG0212)"]
["AT3G26710","cyan","cofactor assembly of complex C;(source:Araport11)","COFACTOR ASSEMBLY OF COMPLEX C (CCB1)","COFACTOR ASSEMBLY OF COMPLEX C (CCB1)"]
["AT1G59840","cyan","cofactor assembly of complex C;(source:Araport11)","COFACTOR ASSEMBLY OF COMPLEX C (CCB4)","COFACTOR ASSEMBLY OF COMPLEX C (CCB4)"]
["AT5G36120","cyan","One of four Arabidopsis homologs of bacterial ymlg proteins.","COFACTOR ASSEMBLY, COMPLEX C (B6F) (CCB3)","COFACTOR ASSEMBLY, COMPLEX C (B6F) (CCB3); (atylmg3); (YLMG3)"]
["AT2G44050","cyan","6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway. The mRNA is cell-to-cell mobile.","COI1 SUPPRESSOR1 (COS1)","COI1 SUPPRESSOR1 (COS1);CORONATINE INSENSITIVE1 SUPPRESSOR (COS1)"]
["AT1G13030","cyan","Encodes a plant coilin, a protein that in other organisms is a major structural scaffolding protein necessary for Cajal body formation, composition and activity. It has been shown to bind both U1 and U1 snRNAs in vitro.","COILIN (COILIN)","COILIN (COILIN); (ATCOILIN)"]
["AT2G15970","cyan","encodes an alpha form of a protein similar to the cold acclimation protein WCOR413 in wheat. Expression is induced by short-term cold-treatment, water deprivation, and abscisic acid treatment. The mRNA is cell-to-cell mobile.","COLD REGULATED 413 PLASMA MEMBRANE 1 (COR413-PM1)","COLD REGULATED 413 PLASMA MEMBRANE 1 (COR413-PM1); (WCOR413); (WCOR413-LIKE);ARABIDOPSIS THALIANA COLD-REGULATED413 PLASMA MEMBRANE 1 (ATCOR413-PM1); (FL3-5A3);CYCLOPHILLIN 19 (ATCYP19)"]
["AT4G38240","cyan","Encodes N-acetyl glucosaminyl transferase I, the first enzyme in the pathway of complex glycan biosynthesis.","COMPLEX GLYCAN LESS 1 (CGL1)","COMPLEX GLYCAN LESS 1 (CGL1);COMPLEX GLYCAN LESS (CGL);N-ACETYLGLUCOSAMINYLTRANSFERASE I (GNTI)"]
["AT2G24790","cyan","Positive regulator of photomorphogenesis that acts downstream of COP1 but can promote lateral root development independently of COP1 and also function as a daylength-sensitive regulator of shoot branching. The mRNA is cell-to-cell mobile.","CONSTANS-LIKE 3 (COL3)","CONSTANS-LIKE 3 (COL3); (ATCOL3);B-BOX DOMAIN PROTEIN 4 (BBX4)"]
["AT3G07650","cyan","This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups: groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO. The mRNA is cell-to-cell mobile.","CONSTANS-LIKE 9 (COL9)","CONSTANS-LIKE 9 (COL9);B-BOX DOMAIN PROTEIN 7 (BBX7)"]
["AT1G71230","cyan","Encodes a subunit of the COP9 complex, similar to JAB1, a specific mammalian coactivator of AP-1 transcription. Involved in protein deneddylation. Double mutants with CSN5A are constitutively photomorphogenic (de-etiolated) and have abnormal auxin responses.","COP9-SIGNALOSOME 5B (CSN5B)","COP9-SIGNALOSOME 5B (CSN5B); (CSN5); (AJH2)"]
["AT3G43670","cyan","Copper amine oxidase family protein;(source:Araport11)","COPPER AMINE OXIDASE GAMMA 2 (CuAOgamma2)","COPPER AMINE OXIDASE GAMMA 2 (CuAOgamma2)"]
["AT1G62810","cyan","Encodes COPPER AMINE OXIDASE1 (CuAO1). Contributes to abscisic acid- and polyamine-induced nitric oxide biosynthesis and abscisic acid signal transduction.","COPPER AMINE OXIDASE1 (CUAO1)","COPPER AMINE OXIDASE1 (CUAO1);COPPER AMINE OXIDASE GAMMA 1 (CuAOgamma1)"]
["AT5G13290","cyan","Encodes a protein with predicted Ser/Thr kinase activity and membrane localization that is involved in the CLV3 signaling pathway that represses WUS expression in the meristem. Loss of function of CRN can suppress the phenotype caused by overexpression of CLV3. SOL2 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol2 partially suppresses the short root phenotype caused by CLE19 overexpression. Mutant flowers have extra carpels.","CORYNE (CRN)","CORYNE (CRN);SUPPRESSOR OF LLP1 2 (SOL2)"]
["AT2G47400","cyan","CP12-1 encodes a small peptide found in the chloroplast stroma. It belongs to the CP12 gene family thought to be involved in the formation of a supramolecular complex with glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase (PRK) embedded in the Calvin cycle. The mRNA is cell-to-cell mobile.","CP12 DOMAIN-CONTAINING PROTEIN 1 (CP12-1)","CP12 DOMAIN-CONTAINING PROTEIN 1 (CP12-1);CP12 DOMAIN-CONTAINING PROTEIN 1 (CP12)"]
["AT3G09780","cyan","CRINKLY4 related 1;(source:Araport11)","CRINKLY4 RELATED 1 (CCR1)","CRINKLY4 RELATED 1 (CCR1); (ATCRR1)"]
["AT5G24850","cyan","Binds flavin adenine dinucleotide and DNA. It does not have photolyase activity, and it is likely to act as photoreceptor. Closely related to Synechocystis cryptochrome.","CRYPTOCHROME 3 (CRY3)","CRYPTOCHROME 3 (CRY3)"]
["AT4G20320","cyan","Cytidine triphosphate synthase.","CTP SYNTHASE 4 (CTPS4)","CTP SYNTHASE 4 (CTPS4)"]
["AT1G47210","cyan","Encodes a mitotic A-type cyclin, subtype 3 whose transcripts are highly accumulated at the G1/S phase.","CYCLIN A 3;2 (CYCA3;2)","CYCLIN A 3;2 (CYCA3;2)"]
["AT1G20610","cyan","Cyclin B2;(source:Araport11)","CYCLIN B2;3 (CYCB2;3)","CYCLIN B2;3 (CYCB2;3)"]
["AT4G28980","cyan","Encodes a CDK-activating kinase that regulates root initial cell differentiation. Phosphorylates CDKD2 and CDKD3, but not CDKD1. Controls CDK activities and basal transcription.","CDK-ACTIVATING KINASE 1AT (CAK1AT)","CYCLIN-DEPENDENT KINASE F;1 (CDKF;1);CDK-ACTIVATING KINASE 1AT (CAK1AT)"]
["AT2G36130","cyan","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11)","CYCLOPHILIN (CYCLOPHILIN)","CYCLOPHILIN (CYCLOPHILIN)"]
["AT3G01480","cyan","Encodes a chloroplast cyclophilin functioning in the assembly and maintenance of photosystem II (PSII) supercomplexes. The mRNA is cell-to-cell mobile.","CYCLOPHILIN 38 (CYP38)","CYCLOPHILIN 38 (CYP38);ARABIDOPSIS CYCLOPHILIN 38 (ATCYP38)"]
["AT3G48340","cyan","KDEL-tailed cysteine endopeptidase. Mutants generated via RNAi show decreased lateral root growth.","CYSTEINE ENDOPEPTIDASE 2 (CEP2)","CYSTEINE ENDOPEPTIDASE 2 (CEP2)"]
["AT4G36880","cyan","cysteine proteinase1;(source:Araport11)","CYSTEINE PROTEINASE1 (CP1)","CYSTEINE PROTEINASE1 (CP1);RD21A-LIKE PROTEASE1 (RDL1)"]
["AT1G22450","cyan","subunit 6b of cytochrome c oxidase","CYTOCHROME C OXIDASE 6B (COX6B)","CYTOCHROME C OXIDASE 6B (COX6B);CYTOCHROME C OXIDASE 6B2 (ATCOX6B2)"]
["AT4G12310","cyan","member of CYP706A","CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 5 (CYP706A5)","CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 5 (CYP706A5)"]
["AT4G27710","cyan","member of CYP709B The mRNA is cell-to-cell mobile.","CYTOCHROME P450, FAMILY 709, SUBFAMILY B, POLYPEPTIDE 3 (CYP709B3)","CYTOCHROME P450, FAMILY 709, SUBFAMILY B, POLYPEPTIDE 3 (CYP709B3)"]
["AT3G26180","cyan","putative cytochrome P450","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 20 (CYP71B20)","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 20 (CYP71B20)"]
["AT1G75130","cyan","member of CYP721A","CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 (CYP721A1)","CYTOCHROME P450, FAMILY 721, SUBFAMILY A, POLYPEPTIDE 1 (CYP721A1)"]
["AT2G22330","cyan","Encodes a cytochrome P450. Involved in tryptophan metabolism. Converts Trp to indole-3-acetaldoxime (IAOx), a precursor to IAA and indole glucosinolates.The mRNA is cell-to-cell mobile.","CYTOCHROME P450, FAMILY 79, SUBFAMILY B, POLYPEPTIDE 3 (CYP79B3)","CYTOCHROME P450, FAMILY 79, SUBFAMILY B, POLYPEPTIDE 3 (CYP79B3)"]
["AT4G37330","cyan","member of CYP81D","CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 4 (CYP81D4)","CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 4 (CYP81D4)"]
["AT4G37410","cyan","member of CYP81F The mRNA is cell-to-cell mobile.","CYTOCHROME P450, FAMILY 81, SUBFAMILY F, POLYPEPTIDE 4 (CYP81F4)","CYTOCHROME P450, FAMILY 81, SUBFAMILY F, POLYPEPTIDE 4 (CYP81F4)"]
["AT5G10600","cyan","member of CYP81K","CYTOCHROME P450, FAMILY 81, SUBFAMILY K, POLYPEPTIDE 2 (CYP81K2)","CYTOCHROME P450, FAMILY 81, SUBFAMILY K, POLYPEPTIDE 2 (CYP81K2)"]
["AT4G31500","cyan","Encodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction.","CYTOCHROME P450, FAMILY 83, SUBFAMILY B, POLYPEPTIDE 1 (CYP83B1)","CYTOCHROME P450, FAMILY 83, SUBFAMILY B, POLYPEPTIDE 1 (CYP83B1);SUPERROOT 2 (SUR2);RUNT 1 (RNT1);RED ELONGATED 1 (RED1);ALTERED TRYPTOPHAN REGULATION 4 (ATR4); (REF5)"]
["AT1G01600","cyan","Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed significantly at highest level in mature stems and flowers.","CYTOCHROME P450, FAMILY 86, SUBFAMILY A, POLYPEPTIDE 4 (CYP86A4)","CYTOCHROME P450, FAMILY 86, SUBFAMILY A, POLYPEPTIDE 4 (CYP86A4)"]
["AT4G39510","cyan","member of CYP96A","CYTOCHROME P450, FAMILY 96, SUBFAMILY A, POLYPEPTIDE 12 (CYP96A12)","CYTOCHROME P450, FAMILY 96, SUBFAMILY A, POLYPEPTIDE 12 (CYP96A12)"]
["AT1G65340","cyan","member of CYP96A","CYTOCHROME P450, FAMILY 96, SUBFAMILY A, POLYPEPTIDE 3 (CYP96A3)","CYTOCHROME P450, FAMILY 96, SUBFAMILY A, POLYPEPTIDE 3 (CYP96A3)"]
["AT1G47620","cyan","member of CYP96A","CYTOCHROME P450, FAMILY 96, SUBFAMILY A, POLYPEPTIDE 8 (CYP96A8)","CYTOCHROME P450, FAMILY 96, SUBFAMILY A, POLYPEPTIDE 8 (CYP96A8)"]
["AT4G15110","cyan","member of CYP97B","CYTOCHROME P450, FAMILY 97, SUBFAMILY B, POLYPEPTIDE 3 (CYP97B3)","CYTOCHROME P450, FAMILY 97, SUBFAMILY B, POLYPEPTIDE 3 (CYP97B3)"]
["AT5G53290","cyan","encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. CRF proteins relocalize to the nucleus in response to cytokinin.","CYTOKININ RESPONSE FACTOR 3 (CRF3)","CYTOKININ RESPONSE FACTOR 3 (CRF3)"]
["AT3G61630","cyan","CRF6 encodes one of the six cytokinin response factors. CRF5 belongs to the AP2/ERF superfamily of the transcriptional factors. CRF proteins rapidly relocalize to the nucleus in response to cytokinin. Analysis of loos-of-function mutants revealed that the CRFs function redundantly to regulate the development of embryos, cotyledons and leaves.","CYTOKININ RESPONSE FACTOR 6 (CRF6)","CYTOKININ RESPONSE FACTOR 6 (CRF6)"]
["AT1G04270","cyan","Encodes cytosolic ribosomal protein S15.","CYTOSOLIC RIBOSOMAL PROTEIN S15 (RPS15)","CYTOSOLIC RIBOSOMAL PROTEIN S15 (RPS15);RIBOSOMAL PROTEIN US19U (US19U)"]
["AT1G04410","cyan","predicted to encode a cytosolic malate dehydrogenase. Together with GS1 indispensable for Arabidopsis to metabolize HCHO.","CYTOSOLIC-NAD-DEPENDENT MALATE DEHYDROGENASE 1 (c-NAD-MDH1)","CYTOSOLIC-NAD-DEPENDENT MALATE DEHYDROGENASE 1 (c-NAD-MDH1); (NDH1)"]
["AT4G31040","cyan","Chloroplast membrane protein that modulates H+ homeostasis and regulates NPQ.","DAY-LENGTH-DEPENDENT DELAYED-GREENING1 (DLDG1)","DAY-LENGTH-DEPENDENT DELAYED-GREENING1 (DLDG1)"]
["AT5G66750","cyan","Protein is similar to SWI2/SNF2 chromatin remodeling proteins. DDM1 is appears to act as a chromatin-remodeling ATPase involved in cytosine methylation in CG and non-CG contexts. Involved in gene silencing and maintenance of DNA methylation and histone methylation. Hypomethylation of many genomic regions occurs in ddm1 mutants, and can cause several phenotypic abnormalities, but some loci, such as BONSAI (At1g73177) can be hypermethylated in ddm1 mutants after several generations, leading to different phenotypes. DDM1 might be involved in establishing a heterochromain boundary. A line expressing an RNAi targeted against DDM1 shows some resistance to agrobacterium-mediated root transformation.","CHROMATIN REMODELING 1 (CHR1)","DECREASED DNA METHYLATION 1 (DDM1);CHROMATIN REMODELING 1 (CHR01);CHROMATIN REMODELING 1 (CHR1); (ATDDM1); (CHA1); (SOM4);SOMNIFEROUS 1 (SOM1)"]
["AT2G47940","cyan","Encodes DegP2 protease (DEGP2); nuclear gene for chloroplast product.","DEGRADATION OF PERIPLASMIC PROTEINS 2 (DEG2)","DEGP PROTEASE 2 (DEGP2);EMBRYO DEFECTIVE 3117 (EMB3117);DEGRADATION OF PERIPLASMIC PROTEINS 2 (DEG2)"]
["AT1G28320","cyan","Mutants in this gene are defective in the processing of pre-glyoxysomal malate dehydrogenase (pre-gMDH) to gMDH.","DEGRADATION OF PERIPLASMIC PROTEINS 15 (DEG15)","DEGRADATION OF PERIPLASMIC PROTEINS 15 (DEG15); (ATDEG15)"]
["AT5G16710","cyan","DHAR3 protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide.Encodes 30-40% of extractable leaf GSH-dependent DHAR activity. Single knockout mutants show unaltered ascorbate and glutathione status in optimal and oxidative stress conditions.Makes a minor contribution to glutathione oxidation in response to increased intracellular hydrogen peroxide (catalase deficiency) (PMID:28381499).","DEHYDROASCORBATE REDUCTASE 1 (DHAR3)","DEHYDROASCORBATE REDUCTASE 1 (DHAR3)"]
["AT2G39705","cyan","ROTUNDIFOLIA like 8;(source:Araport11)","ROTUNDIFOLIA LIKE 8 (RTFL8)","DEVIL 11 (DVL11);ROTUNDIFOLIA LIKE 8 (RTFL8)"]
["AT4G24570","cyan","Encodes one of the mitochondrial dicarboxylate carriers (DIC): DIC1 (AT2G22500), DIC2 (AT4G24570), DIC3 (AT5G09470). The mRNA is cell-to-cell mobile.","DICARBOXYLATE CARRIER 2 (DIC2)","DICARBOXYLATE CARRIER 2 (DIC2);PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 4 (UCP4)"]
["AT5G12860","cyan","AtpOMT1 encodes dicarboxylate transporter functions both as as an oxaloacetate/malate transporter and as a 2-oxoglutarate/malate transporter.","DICARBOXYLATE TRANSPORTER 1 (DiT1)","DICARBOXYLATE TRANSPORTER 1 (DiT1)"]
["AT4G22930","cyan","Encodes dihydroorotase (PYR4).","PYRIMIDIN 4 (PYR4)","DIHYDROOROTASE (DHOASE);PYRIMIDIN 4 (PYR4)"]
["AT2G40840","cyan","Encodes a cytosolic protein with transglucosidase and amylomaltase activity. It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. The protein binds to heteroglycans and utilizes glucose, mannose and xylose as acceptors. Fucose and galactose can also act as acceptors but less efficiently than the previous three. It was also was also recently reported to act on maltodextrins. On the other hand, arabinose and fructose were not efficiently used. Its role probably includes metabolizing maltose exported from the chloroplast. Studies using maltose extracted from the double mutant be2-1 be3-2 showed that this enzyme is preferentially active of &#946;-maltose. The mRNA is cell-to-cell mobile.","DISPROPORTIONATING ENZYME 2 (DPE2)","DISPROPORTIONATING ENZYME 2 (DPE2)"]
["AT1G13180","cyan","Mutant has defect in trichome cell expansion and actin organization resulting in a distorted trichome phenotype.","DISTORTED TRICHOMES 1 (DIS1)","DISTORTED TRICHOMES 1 (DIS1);ACTIN-RELATED PROTEIN 3 (ARP3);ARABIDOPSIS THALIANA ACTIN-RELATED PROTEIN 3 (ATARP3)"]
["AT3G17830","cyan","Molecular chaperone Hsp40/DnaJ family protein;(source:Araport11)","DNA J PROTEIN A4 (DJA4)","DNA J PROTEIN A4 (DJA4)"]
["AT4G39960","cyan","Essential for chloroplast iron?sulfur cluster biogenesis.","DNA J PROTEIN A5 (DJA5)","DNA J PROTEIN A5 (DJA5)"]
["AT1G80030","cyan","Molecular chaperone Hsp40/DnaJ family protein;(source:Araport11)","DNA J PROTEIN A7 (DJA7)","DNA J PROTEIN A7 (DJA7)"]
["AT5G49160","cyan","Encodes a cytosine methyltransferase MET1. Required for silencing of FWA paternal allele in endosperm. Two lines with RNAi constructs directed against DMT1 have reduced agrobacterium-mediated tumor formation. The mRNA is cell-to-cell mobile.","METHYLTRANSFERASE 1 (MET1)","DNA METHYLTRANSFERASE 01 (DMT01);DECREASED DNA METHYLATION 2 (DDM2);DNA METHYLTRANSFERASE 1 (DMT1);METHYLTRANSFERASE 1 (MET1);METHYLTRANSFERASE 2 (MET2);METHYLTRANSFERASE I (METI)"]
["AT3G12610","cyan","Plays role in DNA-damage repair/toleration. Partially complements RecA- phenotypes.","DNA-DAMAGE REPAIR/TOLERATION 100 (DRT100)","DNA-DAMAGE REPAIR/TOLERATION 100 (DRT100)"]
["AT3G21270","cyan","Encodes Dof zinc finger protein adof2.","DOF ZINC FINGER PROTEIN 2 (DOF2)","DOF ZINC FINGER PROTEIN 2 (ADOF2);DOF ZINC FINGER PROTEIN 2 (DOF2)"]
["AT4G12010","cyan","Leucine-rich repeat domain (NLR) receptor. Dominant negative alleles suppress catma3 autoimmunity. Co-regulates with WRKY19 basal levels of immunity to root-knot nematodes.","DOMINANT SUPRESSOR OF CAMTA3 NUMBER 1 (DSC1)","DOMINANT SUPRESSOR OF CAMTA3 NUMBER 1 (DSC1)"]
["AT4G15910","cyan","encodes a gene whose transcript level in root and leaves increases to progressive drought stress. The transcript level is also affected by changes of endogenous or exogenous abscisic acid level. It appears to be a member of plant-specific gene family that includes late embryo-abundant and zinc- IAA-induced proteins in other plants. The mRNA is cell-to-cell mobile.","DROUGHT-INDUCED 21 (DI21)","DROUGHT-INDUCED 21 (DI21);DROUGHT-INDUCED 21 (ATDI21)"]
["AT5G54510","cyan","Encodes an IAA-amido synthase that conjugates Ala, Asp, Phe, and Trp to auxin. Lines overexpressing this gene accumulate IAA-ASP and are hypersensitive to several auxins. Identified as a dominant mutation that displays shorter hypocotyls in light grown plants when compared to wild type siblings. Protein is similar to auxin inducible gene from pea (GH3).","DWARF IN LIGHT 1 (DFL1)","DWARF IN LIGHT 1 (DFL1);GRETCHEN HAGEN3.6 (GH3.6)"]
["AT1G10290","cyan","involved in trafficking from the trans-Golgi Network to the central vacuole. The mRNA is cell-to-cell mobile.","DYNAMIN-LIKE PROTEIN 6 (ADL6)","DYNAMIN-LIKE PROTEIN 6 (ADL6);DYNAMIN-RELATED PROTEIN 2A (DRP2A)"]
["AT2G40550","cyan","Encodes a nuclear localized target of E2Fa-DPa, transcription factors controlling cell cycle progression. Required for sister chromatid cohesion and DNA repair.","E2F TARGET GENE 1 (ETG1)","E2F TARGET GENE 1 (ETG1)"]
["AT2G36010","cyan","Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway.","E2F TRANSCRIPTION FACTOR 3 (E2F3)","E2F TRANSCRIPTION FACTOR 3 (E2F3); (ATE2FA)"]
["AT4G12880","cyan","early nodulin-like protein 19;(source:Araport11)","EARLY NODULIN-LIKE PROTEIN 19 (ENODL19)","EARLY NODULIN-LIKE PROTEIN 19 (ENODL19); (AtENODL19)"]
["AT1G64640","cyan","early nodulin-like protein 8;(source:Araport11)","EARLY NODULIN-LIKE PROTEIN 8 (ENODL8)","EARLY NODULIN-LIKE PROTEIN 8 (ENODL8); (AtENODL8)"]
["AT2G41430","cyan","Encodes hydrophilic protein lacking Cys residues that is expressed in response to drought stress, light stress and treatment with plant-growth-promoting rhizobacteria (Paenibacillus polymyxa), possibly revealing a connection between responses to biotic and abiotic stress. Also identified as a CTC Interacting Domain (CID) protein in a yeast two hybrid screen using the PAB2 protein as bait. Contains PAM2 like domain which mediates interaction with PABC domain in PAB2.","EARLY RESPONSIVE TO DEHYDRATION 15 (ERD15)","EARLY RESPONSIVE TO DEHYDRATION 15 (ERD15);LIGHT STRESS RESPONSE DEFICIENT 1 (LSR1);LIGHT STRESS-REGULATED 1 (LSR1);CTC-INTERACTING DOMAIN 1 (CID1); (LSR1)"]
["AT2G21340","cyan","Encodes a homolog of the multidrug and toxin extrusion transporter ENHANCED DISEASE SUSCEPTIBILITY5 that is constitutively expressed in green tissues independent of pathogen infection and is expressed in the chloroplast envelope. Unlike EDS5, it does not contribute to pathogen-induced SA accumulation.","EDS5 HOMOLOGUE (EDS5H)","EDS5 HOMOLOGUE (EDS5H)"]
["AT3G18910","cyan","EIN2 targeting protein2;(source:Araport11)","EIN2 TARGETING PROTEIN2 (ETP2)","EIN2 TARGETING PROTEIN2 (ETP2)"]
["AT3G09150","cyan","Required for biosynthesis of the tetrapyrrole phytochrome chromophore phytochromobilin. Encodes phytochromobilin synthase, a ferredoxin-dependent biliverdin reductase. It is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast.","ELONGATED HYPOCOTYL 2 (HY2)","ELONGATED HYPOCOTYL 2 (HY2);GENOMES UNCOUPLED 3 (GUN3)"]
["AT4G26300","cyan","Arginyl-tRNA synthetase, class Ic;(source:Araport11)","EMBRYO DEFECTIVE 1027 (emb1027)","EMBRYO DEFECTIVE 1027 (emb1027)"]
["AT3G18110","cyan","P-type pentatricopeptide repeat (PPR) factor involved in chloroplast RNA splicing/gene expression and early plastid development.","EMBRYO DEFECTIVE 1270 (EMB1270)","EMBRYO DEFECTIVE 1270 (EMB1270);ALBINO COTYLEDON MUTANT1 (ACM1)"]
["AT1G49510","cyan","Salt stress inducible protein of unknown function.","EMBRYO DEFECTIVE 1273 (emb1273)","EMBRYO DEFECTIVE 1273 (emb1273);DELAYED PALE-GREENING1 (DPG1)"]
["AT4G23250","cyan","cysteine-rich receptor-like protein kinase 17;(source:Araport11)","EMBRYO DEFECTIVE 1290 (emb1290)","EMBRYO DEFECTIVE 1290 (emb1290)"]
["AT5G66055","cyan","A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.","ANKYRIN REPEAT PROTEIN (AKRP)","EMBRYO DEFECTIVE 16 (EMB16);EMBRYO DEFECTIVE 2036 (EMB2036);ANKYRIN REPEAT PROTEIN (AKRP); (AKR); (STT2); (123B)"]
["AT5G27740","cyan","A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.","EMBRYO DEFECTIVE 2775 (EMB2775)","EMBRYO DEFECTIVE 161 (EMB161);EMBRYO DEFECTIVE 2775 (EMB2775);REPLICATION FACTOR C 5 (RFC5);EMBRYO DEFECTIVE 251 (EMB251);REPLICATION FACTOR C 3 (RFC3)"]
["AT3G04400","cyan","Involved in non-host resistance.","EMBRYO DEFECTIVE 2171 (emb2171)","EMBRYO DEFECTIVE 2171 (emb2171); (RPL23);RIBOSOMAL PROTEIN UL14Y (UL14Y)"]
["AT1G75350","cyan","Ribosomal protein L31;(source:Araport11)","EMBRYO DEFECTIVE 2184 (emb2184)","EMBRYO DEFECTIVE 2184 (emb2184);RIBOSOMAL PROTEIN BL31C (BL31C)"]
["AT2G18020","cyan","Ribosomal protein L2 family;(source:Araport11)","EMBRYO DEFECTIVE 2296 (EMB2296)","EMBRYO DEFECTIVE 2296 (EMB2296);RIBOSOMAL PROTEIN UL2Z (UL2Z)"]
["AT4G04350","cyan","tRNA synthetase class I (I, L, M and V) family protein;(source:Araport11)","EMBRYO DEFECTIVE 2369 (EMB2369)","EMBRYO DEFECTIVE 2369 (EMB2369)"]
["AT1G02780","cyan","Ribosomal protein L19e family protein;(source:Araport11)","EMBRYO DEFECTIVE 2386 (emb2386)","EMBRYO DEFECTIVE 2386 (emb2386);RIBOSOMAL PROTEIN EL19X (EL19X)"]
["AT4G39620","cyan","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","EMBRYO DEFECTIVE 2453 (EMB2453)","EMBRYO DEFECTIVE 2453 (EMB2453);A. THALIANA PENTATRICOPEPTIDE REPEAT 5 (ATPPR5); (PPR5)"]
["AT5G55940","cyan","Uncharacterized protein family (UPF0172);(source:Araport11)","EMBRYO DEFECTIVE 2731 (emb2731)","EMBRYO DEFECTIVE 2731 (emb2731)"]
["AT1G34550","cyan","transmembrane protein (DUF616);(source:Araport11)","EMBRYO DEFECTIVE 2756 (EMB2756)","EMBRYO DEFECTIVE 2756 (EMB2756)"]
["AT2G04842","cyan","Encodes a dual localized threonyl-tRNA synthetase found both in the mitochondrion and the chloroplast. Plants mutated in this gene terminate as embryos in the globular stage.","EMBRYO DEFECTIVE 2761 (EMB2761)","EMBRYO DEFECTIVE 2761 (EMB2761)"]
["AT3G02660","cyan","Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial;(source:Araport11)","EMBRYO DEFECTIVE 2768 (emb2768)","EMBRYO DEFECTIVE 2768 (emb2768);EMBRYONIC FACTOR 31 (FAC31)"]
["AT5G49010","cyan","Similar to the SLD5 component of GINS complex, which in other organism was shown to be involved in the initiation of DNA replication.","SYNTHETIC LETHALITY WITH DPB11-1 5 (SLD5)","EMBRYO DEFECTIVE 2812 (EMB2812);SYNTHETIC LETHALITY WITH DPB11-1 5 (SLD5)"]
["AT5G10360","cyan","RPS6A and RPS6B are fully redundant and essential during gametogenesis.","EMBRYO DEFECTIVE 3010 (EMB3010)","EMBRYO DEFECTIVE 3010 (EMB3010);RIBOSOMAL PROTEIN ES6Y (ES6Y);RIBOSOMAL PROTEIN SMALL SUBUNIT 6B (RPS6B)"]
["AT1G48350","cyan","Member of the uL18 RNA-binding protein family. uL18 proteins share a short structurally conserved domain that binds the 5S rRNA and allow its incorporation into ribosomes.","EMBRYO DEFECTIVE 3105 (EMB3105)","EMBRYO DEFECTIVE 3105 (EMB3105); (UL18C)"]
["AT3G04790","cyan","Ribose 5-phosphate isomerase, type A protein. Loss of function is embryo lethal.","EMBRYO DEFECTIVE 3119 (EMB3119)","EMBRYO DEFECTIVE 3119 (EMB3119)"]
["AT4G02790","cyan","Encodes a GTPase that is targeted to chloroplasts and co-fractionated with chloroplast ribosomes. Mutants are embryo lethal due to this essential function being lost.","EMBRYO DEFECTIVE 3129 (EMB3129)","EMBRYO DEFECTIVE 3129 (EMB3129); (ATRBGA);RIBOSOME BIOGENESIS GTPASE A (RBGA)"]
["AT5G53860","cyan","Encodes a plant-specific protein with a domain similar to the central cysteine-rich domain of DnaJ proteins. It is involved in chloroplast and leaf development.","ANGULATA 7 (ANU7)","EMBRYO DEFECTIVE 64 (EMB64);EMBRYO DEFECTIVE 2737 (emb2737);ANGULATA 7 (ANU7)"]
["AT5G22800","cyan","A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.","EMBRYO DEFECTIVE 1030 (EMB1030)","EMBRYO DEFECTIVE 86 (EMB86);EMBRYO DEFECTIVE 1030 (EMB1030);EMBRYO DEFECTIVE 263 (EMB263)"]
["AT1G30610","cyan","Pentatricopeptide repeat protein .Mutations in this locus result in embryo lethality due to defects in chloroplast development. Embryo shape at seed maturity is globular.","EMBRYO DEFECTIVE 2279 (emb2279)","EMBRYO DEFECTIVE 88 (EMB88);EMBRYO DEFECTIVE 2279 (emb2279);SUPPRESSOR OF THF1 (SOT5)"]
["AT4G00020","cyan","Ortholog of breast cancer susceptibility protein 2. Essential at meiosis. Interacts with either AtRad51 or AtDmc1 and ATDSS1(I). Involved in embryo sac development and defense gene transcription during plant immune responses.","BREAST CANCER 2 LIKE 2A (BRCA2(IV))","EMBRYO SAC DEVELOPMENT ARREST 20 (EDA20);BREAST CANCER 2 LIKE 2A (BRCA2(IV)); (BRCA2A);MATERNAL EFFECT EMBRYO ARREST 43 (MEE43)"]
["AT2G34860","cyan","DnaJ-like zinc finger domain-containing protein which regulates the assembly of photosystem I (PSI) and seed development.","EMBRYO SAC DEVELOPMENT ARREST 3 (EDA3)","EMBRYO SAC DEVELOPMENT ARREST 3 (EDA3); (PSA2)"]
["AT4G37890","cyan","Involved in shoot regenaration from root explants.","EMBRYO SAC DEVELOPMENT ARREST 40 (EDA40)","EMBRYO SAC DEVELOPMENT ARREST 40 (EDA40)"]
["AT4G21600","cyan","Encodes a protein with mismatch-specific endonuclease activity with a preference for T/G, A/G, and G/G of single base mismatches. It also has the ability to cleave indel types of mismatches (heteroduplexes with loops).","ENDONUCLEASE 5 (ENDO5)","ENDONUCLEASE 5 (ENDO5)"]
["AT2G06850","cyan","endoxyloglucan transferase (EXGT-A1) gene","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 4 (XTH4)","ENDOXYLOGLUCAN TRANSFERASE A1 (EXGT-A1);ENDOXYLOGLUCAN TRANSFERASE (EXT);XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 4 (XTH4)"]
["AT1G31410","cyan","putrescine-binding periplasmic protein-like protein;(source:Araport11)","ENLARGED FIL EXPRESSION DOMAIN 2 (ENF2)","ENLARGED FIL EXPRESSION DOMAIN 2 (ENF2)"]
["AT5G57090","cyan","Encodes an auxin efflux carrier that is similar to bacterial membrane transporters. Root-specific role in the transport of auxin. Acts downstream of CTR1 and ethylene biosynthesis, in the same pathway as EIN2 and AUX1, and independent from EIN3 and EIN5/AIN1 pathway. In the root, the protein localizes apically in epidermal and lateral root cap cells and predominantly basally in cortical cells. Functions may be regulated by phosphorylation status. EIR1 expression is induced by brassinolide treatment in the brassinosteroid-insensitive br1 mutant. Gravistimulation results in asymmetric PIN2 distribution, with more protein degraded at the upper side of the gravistimulated root. Membrane sterol composition is essential for the acquisition of PIN2 polarity. Its expression is downregulated at hypoxic conditions. RAP2.12 overexpression inhibits this downregulation.","ETHYLENE INSENSITIVE ROOT 1 (EIR1)","ETHYLENE INSENSITIVE ROOT 1 (EIR1);WAVY ROOTS 6 (WAV6);ARABIDOPSIS THALIANA PIN-FORMED 2 (ATPIN2); (MM31);AGRAVITROPIC ROOT (AGR);AGRAVITROPIC ROOT 1 (AGR1);PIN-FORMED 2 (PIN2)"]
["AT5G05740","cyan","S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442?454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171?179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria.","ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 2 (EGY2)","ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 2 (EGY2); (ATEGY2)"]
["AT1G05010","cyan","Encodes 1-aminocyclopropane-1-carboxylate oxidase","ETHYLENE-FORMING ENZYME (EFE)","ETHYLENE-FORMING ENZYME (EFE);ETHYLENE FORMING ENZYME (ACO4); (EAT1)"]
["AT1G30230","cyan","Encodes a guanine nucleotide exchange factor that plays an important role in translation elongation. It is localized in the plasma membrane and cytosol. Mutants display ectopic lignin deposition as well as cell expansion defects","EUKARYOTIC ELONGATION FACTOR 1B BETA 1 (EEF-1BB1)","EUKARYOTIC ELONGATION FACTOR 1B BETA 1 (EEF-1BB1);ELONGATION FACTOR 1B BETA (EF1BB)"]
["AT1G26630","cyan","Eukaryotic translation initiation factor 5A-2. Involved in programmed cell death triggered as a response to pseudomonas syringae infection. Loss of function mutants are more resistant to infection. The mRNA is cell-to-cell mobile.","FUMONISIN B1-RESISTANT12 (FBR12)","EUKARYOTIC ELONGATION FACTOR 5A-2 (ATELF5A-2);EUKARYOTIC ELONGATION FACTOR 5A-2 (ELF5A-2);FUMONISIN B1-RESISTANT12 (FBR12)"]
["AT4G33250","cyan","Encodes initiation factor 3k (EIF3k).","EUKARYOTIC TRANSLATION INITIATION FACTOR 3K (EIF3K)","EUKARYOTIC TRANSLATION INITIATION FACTOR 3K (EIF3K); (TIF3K1); (ATTIF3K1)"]
["AT3G53890","cyan","Cytosolic ribosomal protein. Mutants enhance the varigation effect of var2 mutations suggesting a link between cytosolic translation and chloroplast development.","EVERSHED1 (EVR1)","EVERSHED1 (EVR1); (RPS21B);RIBOSOMAL PROTEIN ES21Z (ES21Z)"]
["AT5G27700","cyan","Cytosolic ribosomal protein. Similar to EVR1 and redundant with EVR1. Also enhances VAR2 mutant varigation, but to a lesser extent than evr1.","EVERSHED1-LIKE 1 (EVR1L1)","EVERSHED1-LIKE 1 (EVR1L1); (RPS21C);RIBOSOMAL PROTEIN ES21Y (ES21Y)"]
["AT5G59730","cyan","A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. The mRNA is cell-to-cell mobile.","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H7 (EXO70H7)","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H7 (EXO70H7);EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H7 (ATEXO70H7)"]
["AT1G20190","cyan","member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)","EXPANSIN 11 (EXPA11)","EXPANSIN 11 (ATEXPA11);EXPANSIN 11 (EXP11);EXPANSIN 11 (EXPA11); (ATHEXP ALPHA 1.14); (ATEXP11)"]
["AT1G26770","cyan","Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","EXPANSIN A10 (EXPA10)","EXPANSIN A10 (EXPA10);ARABIDOPSIS THALIANA EXPANSIN ALPHA 1.1 (ATHEXP ALPHA 1.1);EXPANSIN A10 (ATEXPA10);ARABIDOPSIS THALIANA EXPANSIN 10 (AT-EXP10);ARABIDOPSIS THALIANA EXPANSIN 10 (ATEXP10);EXPANSIN 10 (EXP10)"]
["AT3G03220","cyan","member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)","EXPANSIN A13 (EXPA13)","EXPANSIN A13 (ATEXPA13); (EXP13);EXPANSIN 13 (ATEXP13); (ATHEXP ALPHA 1.22);EXPANSIN A13 (EXPA13)"]
["AT5G05290","cyan","Encodes an expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)","EXPANSIN A2 (EXPA2)","EXPANSIN A2 (ATEXPA2);EXPANSIN 2 (EXP2);EXPANSIN A2 (EXPA2); (ATHEXP ALPHA 1.12); (ATEXP2)"]
["AT4G38210","cyan","expansin -like protein. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","EXPANSIN A20 (EXPA20)","EXPANSIN A20 (ATEXPA20);EXPANSIN 20 (EXP20); (ATEXP20); (ATHEXP ALPHA 1.23);EXPANSIN A20 (EXPA20)"]
["AT1G23720","cyan","Proline-rich extensin-like family protein;(source:Araport11)","EXTENSIN 15 (EXT15)","EXTENSIN 15 (EXT15)"]
["AT3G28550","cyan","Proline-rich extensin-like family protein;(source:Araport11)","EXTENSIN 16 (EXT16)","EXTENSIN 16 (EXT16)"]
["AT3G54580","cyan","Proline-rich extensin-like family protein;(source:Araport11)","EXTENSIN 17 (EXT17)","EXTENSIN 17 (EXT17)"]
["AT1G76930","cyan","Encodes an Arabidopsis extensin gene that belongs to cell-wall hydroxyproline-rich glycoproteins. The cross-link of extensins enforces cell wall strength. Transgenic plants overexpressing this gene show an increase in stem thickness.","EXTENSIN 4 (EXT4)","EXTENSIN 4 (ATEXT4);OBP3-RESPONSIVE GENE 5 (ORG5);EXTENSIN 1 (ATEXT1);EXTENSIN 1 (EXT1);EXTENSIN 4 (EXT4)"]
["AT3G54650","cyan","F- box protein involved in regulation of cell cycle genes.","F BOX-LIKE17 (FBL17)","F BOX-LIKE17 (FBL17);SUPPRESSORS OF ATR 1 (SOAT1)"]
["AT1G80790","cyan","Belongs to a subgroup of SGS3-like proteins that act redundantly in RNA-directed DNA methylation: AT1G15910 (FDM1), AT4G00380 (FDM2), AT3G12550 (FDM3), AT1G13790 (FDM4), AT1G80790 (FDM5). The mRNA is cell-to-cell mobile.","FACTOR OF DNA METHYLATION 5 (FDM5)","FACTOR OF DNA METHYLATION 5 (FDM5)"]
["AT1G48360","cyan","Encodes a FAN1 homolog that is involved in interstrand crosslink repair. FAN1 appears to act in in a different pathway from MUS81 but in similar pathway with RECQ4A, RAD5A and MFH1.","FANCONI/FANCD2 ASSOCI- ATED NUCLEASE I (FAN1)","FANCONI/FANCD2 ASSOCI- ATED NUCLEASE I (FAN1)"]
["AT5G63910","cyan","Encodes a farnesylcysteine lyase (EC 1.8.3.5) involved in a salvage /detoxification pathway of farnesylcysteine (FC) residues that are liberated during the degradation of prenylated proteins. Because FC is a competitive inhibitor of prenylcysteine methyltransferases involved in the down-regulation of ABA signaling, fcly mutants with elevated FC levels are hypersensitive to ABA. The protein also appears to be glycosylated when translated in vitro in the presence of microsomal membranes and it likely requires FAD for enzymatic activity.","FARNESYLCYSTEINE LYASE (FCLY)","FARNESYLCYSTEINE LYASE (FCLY)"]
["AT1G65470","cyan","Chromatin Assembly Factor-1 (CAF-1) p150 subunit. Mutants have reduced heterochromatin content. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis.","FASCIATA 1 (FAS1)","FASCIATA 1 (FAS1);NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP B (NFB2);FUGU 2 (FUGU2)"]
["AT3G11170","cyan","Chloroplastic enzyme responsible for the synthesis of 16:3 and 18:3 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene expression is induced by wounding in shoot and root. The wound-response in shoot is independent of jasmonic acid mediated pathway whereas the root response is mediated by jasmonic acid. The mRNA is cell-to-cell mobile.","FATTY ACID DESATURASE 7 (FAD7)","FATTY ACID DESATURASE 7 (FAD7);FATTY ACID DESATURASE D (FADD); (AtFAD7)"]
["AT2G38550","cyan","Mediates fatty acid transport from plastid.","FATTY ACID EXPORT 2 (FAX2)","FATTY ACID EXPORT 2 (FAX2)"]
["AT1G33265","cyan","Encodes a chloroplast membrane-localized fatty acid exporter that plays a critical roles in transporting plastid fatty acids for TAG biosynthesis during seed and embryo development.","FATTY ACID EXPORT 4 (FAX4)","FATTY ACID EXPORT 4 (FAX4)"]
["AT3G07870","cyan","FBX92 is an F-box containing protein. Overexpression produces plants with smaller leaves while reduced expression is correlated with increased leaf size and increased rates of cell proliferation.","F-BOX PROTEIN92 (FBX92)","F-BOX PROTEIN92 (FBX92)"]
["AT1G23020","cyan","Encodes a ferric chelate reductase whose transcription is regulated by FIT1. Expressed in the root, shoot, flower and cotyledon.","FERRIC REDUCTION OXIDASE 3 (FRO3)","FERRIC REDUCTION OXIDASE 3 (FRO3)"]
["AT3G53800","cyan","Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150).","FES1B (Fes1B)","FES1B (Fes1B)"]
["AT2G35490","cyan","Involved in photoprotection of photosystem II.","FIBRILLIN2 (FBN2)","FIBRILLIN2 (FBN2)"]
["AT5G09820","cyan","Encodes fibrillin 5 (FBN5). Located in chloroplast stroma. Essential for plastoquinone-9 biosynthesis. Stimulates enzymatic activity of solanesyl diphosphate synthases (SPS) 1 and 2 through binding to solanesyl moiety. Two splicing variants, named FBN5-A shorter one and FBN5-B longer one. FBN5-B is the protein detected in chloroplast stroma. Involved in plastoquinone biosynthesis.","FIBRILLIN5 (FBN5)","FIBRILLIN5 (FBN5)"]
["AT2G31170","cyan","Encodes the cysteinyl t-RNA synthetase SYCO ARATH (SYCO), which is expressed and required in the central cell but not in the antipodals. SYCO, localized to the mitochondria, is necessary for mitochondrial cristae integrity. Mutation of this gene affects the lifespan of adjacent accessory cells.","CYSTEINYL T-RNA SYNTHETASE (SYCO ARATH)","FIONA (FIONA);CYSTEINYL T-RNA SYNTHETASE (SYCO ARATH)"]
["AT5G64350","cyan","Encodes FK506-binding protein 12 (FKBP12 or FKP12). FKP12 overexpression dramatically enhances rapamycin sensitivity, whereas rapamycin inhibition is relieved in transgenic plants deficient in FKP12.","FK506-BINDING PROTEIN 12 (FKBP12)","FK506-BINDING PROTEIN 12 (FKBP12);FK506-BINDING PROTEIN 12 (FKP12);ARABIDOPSIS THALIANA FK506-BINDING PROTEIN 12 (ATFKBP12)"]
["AT1G67170","cyan","Coiled coil domain protein required for phase separation of FCA.","FLX-LIKE 2 (FLL2)","FLX-LIKE 2 (FLL2)"]
["AT4G17350","cyan","FORKED-LIKE family member, part of Group 3 (Group 1 consists of FKD1, FL1-FL3; Group 2 consists of FL4 and FL8 and Group 3 consists of FL5- FL7). May coordinate leaf size with vein density, where Group 1 members and Group 3 members have opposing functions.","FORKED-LIKE5 (FL5)","FORKED-LIKE5 (FL5)"]
["AT4G26520","cyan","Aldolase superfamily protein;(source:Araport11)","FRUCTOSE-BISPHOSPHATE ALDOLASE 7 (FBA7)","FRUCTOSE-BISPHOSPHATE ALDOLASE 7 (FBA7); (ATFBA7)"]
["AT3G16290","cyan","Strong interaction with TIC inner envelope protein translocon which consists of Tic20/Tic56/Tic100/Tic214(Ycf1)(DOI:10.1105/tpc.18.00357).","EMBRYO DEFECTIVE 2083 (EMB2083)","FTSH (FILAMENTATION-TEMPERATURE-SENSITIVE PROTEIN H) INACTIVE 2 (FTSHI2);EMBRYO DEFECTIVE 2083 (EMB2083)"]
["AT2G03220","cyan","member of Glycosyltransferase Family- 37","FUCOSYLTRANSFERASE 1 (FT1)","FUCOSYLTRANSFERASE 1 (FUT1);MURUS 2 (MUR2);ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1 (ATFT1);ARABIDOPSIS THALIANA FUCOSYLTRANSFERASE 1 (ATFUT1);FUCOSYLTRANSFERASE 1 (FT1)"]
["AT1G17220","cyan","Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal. The mRNA is cell-to-cell mobile.","FU-GAERI1 (FUG1)","FU-GAERI1 (FUG1)"]
["AT2G47510","cyan","Encodes a mitochondrial-localized protein. The FUM1 gene appears to be essential, suggesting that FUM1 may play a crucial role as a fumarase in the tricarboxylic acid cycle.","FUMARASE 1 (FUM1)","FUMARASE 1 (FUM1)"]
["AT1G50240","cyan","The FUSED (FU) gene belongs to Ser/Thr protein kinase family and has a key role in the hedgehog signaling pathway known to control cell proliferation and patterning in fruit flies and humans . Arabidopsis thaliana genome has a single Fu gene that is involved in male meiosis cytokinesis. Cytokinesis-defective mutants, named two-in-one (tio), result from mutations in Arabidopsis Fu. Phenotypic analysis of tio mutants reveals an essential role for TIO in conventional modes of cytokinesis in plant meristems and during male gametogenesis. TIO is tightly localized to the midline of the nascent phragmoplast and remains associated with the expanding phragmoplast ring. This gene was previously annotated as two gene models, AT1G50230.1 and AT1G50240.1, however the experimental evidence exists (Oh et al, Current Biology, 2005) showing that these two models are in fact single gene, named FUSED.","FUSED (FU)","FUSED (FU);TWO IN ONE (TIO)"]
["AT4G25420","cyan","Encodes gibberellin 20-oxidase that is involved in the later steps of the gibberellin biosynthetic pathway. Regulated by a circadian clock. Weak expression response to far red light.","GIBBERELLIN 20 OXIDASE 1 (GA20OX1)","GA REQUIRING 5 (GA5);GIBBERELLIN 20 OXIDASE 1 (GA20OX1); (AT2301);ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 1 (ATGA20OX1)"]
["AT5G66510","cyan","Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.","GAMMA CARBONIC ANHYDRASE 3 (GAMMA CA3)","GAMMA CARBONIC ANHYDRASE 3 (GAMMA CA3)"]
["AT4G31290","cyan","ChaC-like family protein;(source:Araport11)","GAMMA-GLUTAMYL CYCLOTRANSFERASE 2;2 (GGCT2;2)","GAMMA-GLUTAMYL CYCLOTRANSFERASE 2;2 (GGCT2;2); (ATGGCT2;2)"]
["AT1G78660","cyan","The Arabidopsis protein AtGGH1 is a gamma-glutamyl hydrolase cleaving pentaglutamates to yield di- and triglutamates. The enzyme is involved in the tetrahydrofolate metabolism and located to the vacuole.","GAMMA-GLUTAMYL HYDROLASE 1 (GGH1)","GAMMA-GLUTAMYL HYDROLASE 1 (ATGGH1);GAMMA-GLUTAMYL HYDROLASE 1 (GGH1)"]
["AT1G78670","cyan","gamma-glutamyl hydrolase 3;(source:Araport11)","GAMMA-GLUTAMYL HYDROLASE 3 (GGH3)","GAMMA-GLUTAMYL HYDROLASE 3 (ATGGH3);GAMMA-GLUTAMYL HYDROLASE 3 (GGH3)"]
["AT4G29210","cyan","The gene encodes a gamma-glutamyltransferase (AKA gamma-glutamyl transpeptidase, EC 2.3.2.2) that is located in the vacuole and is most active in roots. The encoded enzyme is involved in the initial degradation of glutathione conjugates in this cell compartment. It is also induced by xenobiotics and contributes to xenobiotics metabolism. Note that conflicting nomenclature exists in the literature: At4g29210 is named as GGT3 in Plant J. 2007 Mar 49(5):878-88; At4g29210 is named as GGT4 and At1g69820 as GGT3 in Plant Physiol. 2007 Aug 144(4):1715-32.","GAMMA-GLUTAMYL TRANSPEPTIDASE 4 (GGT4)","GAMMA-GLUTAMYL TRANSPEPTIDASE 3 (GGT3);GAMMA-GLUTAMYL TRANSPEPTIDASE 4 (GGT4)"]
["AT5G15230","cyan","Encodes gibberellin-regulated protein GASA4. Promotes GA responses and exhibits redox activity.","GAST1 PROTEIN HOMOLOG 4 (GASA4)","GAST1 PROTEIN HOMOLOG 4 (GASA4)"]
["AT5G25830","cyan","Encodes a member of the GATA factor family of zinc finger transcription factors.","GATA TRANSCRIPTION FACTOR 12 (GATA12)","GATA TRANSCRIPTION FACTOR 12 (GATA12)"]
["AT2G45050","cyan","Encodes a member of the GATA factor family of zinc finger transcription factors. A positive regulator of photomorphogenesis.","GATA TRANSCRIPTION FACTOR 2 (GATA2)","GATA TRANSCRIPTION FACTOR 2 (GATA2)"]
["AT3G60530","cyan","Encodes a member of the GATA factor family of zinc finger transcription factors.","GATA TRANSCRIPTION FACTOR 4 (GATA4)","GATA TRANSCRIPTION FACTOR 4 (GATA4)"]
["AT4G16141","cyan","GATA type zinc finger transcription factor family protein;(source:Araport11)","GATA17-LIKE (GATA17L)","GATA17-LIKE (GATA17L); (ATGATA17L)"]
["AT2G20570","cyan","Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus. GLK1 is also a member of the GARP transcription factor family. Promotes anthocyanin biosynthesis via an MBW complex-dependent pathway.","GBF'S PRO-RICH REGION-INTERACTING FACTOR 1 (GPRI1)","GBF'S PRO-RICH REGION-INTERACTING FACTOR 1 (GPRI1)"]
["AT5G66280","cyan","GDP-D-mannose 4,6-dehydratase","GDP-D-MANNOSE 4,6-DEHYDRATASE 1 (GMD1)","GDP-D-MANNOSE 4,6-DEHYDRATASE 1 (GMD1)"]
["AT1G54000","cyan","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates.","GDSL LIPASE-LIKE PROTEIN 22 (GLL22)","GDSL LIPASE-LIKE PROTEIN 22 (GLL22); (GELP22)"]
["AT1G54010","cyan","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates.","GDSL-LIKE LIPASE 23 (GLL23)","GDSL-LIKE LIPASE 23 (GLL23); (GELP23)"]
["AT1G72610","cyan","germin-like protein (GLP1)","GERMIN-LIKE PROTEIN 1 (GER1)","GERMIN-LIKE PROTEIN 1 (GLP1);A. THALIANA GERMIN-LIKE PROTEIN 1 (ATGER1);GERMIN-LIKE PROTEIN 1 (GER1)"]
["AT5G20630","cyan","Encodes a germin-like protein. Its transcripts are more abundant in RNA from leaves collected in the evening, suggesting some kind of circadian regulation.","GERMIN 3 (GER3)","GERMIN-LIKE PROTEIN 3 (GLP3); (GLP3A);GERMIN 3 (GER3);ARABIDOPSIS THALIANA GERMIN 3 (ATGER3); (GLP3B)"]
["AT1G48520","cyan","Encodes Glu-tRNA(Gln) amidotransferase subunit B (from Genbank record AF239836).","GLU-ADT SUBUNIT B (GATB)","GLU-ADT SUBUNIT B (GATB)"]
["AT1G67490","cyan","Encodes an alpha-glucosidase I enzyme that catalyzes the first step in N-linked glycan processing. Localized to the endoplasmic reticulum (ER).","GLUCOSIDASE 1 (GCS1)","GLUCOSIDASE 1 (GCS1);KNOPF (KNF)"]
["AT5G63840","cyan","Encodes the alpha-subunit of a glucosidase II enzyme. A mutant has been shown to be specifically impaired in cellulose production.","GLUCOSIDASE 2 ALPHA (GSCIIALPHA)","GLUCOSIDASE 2 ALPHA (GSCIIALPHA)"]
["AT1G33800","cyan","Encodes a glucuronoxylan(GX)-speci&#64257;c 4-O-methyltransferase responsible for methylating GlcA residues in GX. Reduced methylation of GX ingxmt1-1 plants is correlated with altered lignin composition. The mRNA is cell-to-cell mobile.","GLUCURONOXYLAN METHYLTRANSFERASE 1 (GXMT1)","GLUCURONOXYLAN METHYLTRANSFERASE 1 (GXMT1); (ATGXMT1);GLUCURONOXYLAN METHYLTRANSFERASE 1 (GXM1);GLUCURONOXYLAN METHYLTRANSFERASE3 (GXM3)"]
["AT5G04140","cyan","Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation. The mRNA is cell-to-cell mobile.","GLUTAMATE SYNTHASE 1 (GLU1)","GLUTAMATE SYNTHASE 1 (GLU1);FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE (FD-GOGAT); (GLUS);FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1 (GLS1)"]
["AT3G48730","cyan","glutamate-1-semialdehyde 2,1-aminomutase 2;(source:Araport11)","GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 2 (GSA2)","GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 2 (GSA2);GLUTAMATE-L-SEMIALDEHYDE AMINOMUTASE (GSAM)"]
["AT5G63570","cyan","Encodes a protein with homology to glutamate-1-semialdehyde 2,1-aminomutase catalyzing the conversion of glutamate-1-semialdehyde (GSA) into 5-amino levulinate. The expression of this gene was demonstrated to be light-induced. The mRNA is cell-to-cell mobile.","GLUTAMATE-1-SEMIALDEHYDE-2,1-AMINOMUTASE (GSA1)","GLUTAMATE-1-SEMIALDEHYDE-2,1-AMINOMUTASE (GSA1)"]
["AT5G35630","cyan","chloroplastic glutamine synthetase The mRNA is cell-to-cell mobile.","GLUTAMINE SYNTHETASE 2 (GS2)","GLUTAMINE SYNTHETASE 2 (GS2);GLUTAMINE SYNTHETASE LIKE 1 (ATGSL1);GLUTAMINE SYNTHETASE 2 (GLN2)"]
["AT1G27140","cyan","Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","GLUTATHIONE S-TRANSFERASE TAU 14 (GSTU14)","GLUTATHIONE S-TRANSFERASE TAU 14 (ATGSTU14);GLUTATHIONE S-TRANSFERASE TAU 14 (GSTU14);GLUTATHIONE S-TRANSFERASE 13 (GST13)"]
["AT3G43800","cyan","Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). The mRNA is cell-to-cell mobile.","GLUTATHIONE S-TRANSFERASE TAU 27 (GSTU27)","GLUTATHIONE S-TRANSFERASE TAU 27 (ATGSTU27);GLUTATHIONE S-TRANSFERASE TAU 27 (GSTU27)"]
["AT5G57440","cyan","A member of haloacid dehalogenase-like hydrolase family, HAD-type phosphosugar phosphatase. Together with MDH1 indispensable for Arabidopsis to metabolize HCHO.","(GS1)","GLYCEROL-3-PHOSPHATASE 2 (GPP2); (GS1)"]
["AT2G35370","cyan","Encodes glycine decarboxylase complex H protein. Involved in photorespiration. The mRNA is cell-to-cell mobile.","GLYCINE DECARBOXYLASE COMPLEX H (GDCH)","GLYCINE DECARBOXYLASE COMPLEX H (GDCH)"]
["AT2G05520","cyan","Encodes a glycine-rich protein that is expressed mainly in stems and leaves. AtGRP3 functions in root size determination during development and in Al stress. mRNA levels are upregulated in response to ABA, salicylic acid and ethylene but downregulated in response to desiccation. The mRNA is cell-to-cell mobile.","GLYCINE-RICH PROTEIN 3 (GRP-3)","GLYCINE-RICH PROTEIN 3 (GRP-3);GLYCINE-RICH PROTEIN 3 (ATGRP-3);GLYCINE-RICH PROTEIN 3 (GRP3);ARABIDOPSIS GLYCINE RICH PROTEIN 3 (ATGRP3)"]
["AT1G55260","cyan","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)","GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 6 (LTPG6)","GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 6 (LTPG6)"]
["AT1G08110","cyan","Encodes a Zn2+ dependent glyoxylase. Enhancement of the glyoxalase pathway under ammonium nutrition is linked mainly to increased GLXI.3 or GLXII.5 transcript level.","GLYOXALASE12 (ATGLYI2)","GLYOXALASE12 (ATGLYI2); (GLXI.3); (GLYI2);GLYOXALASE I;3 (GLXI:3)"]
["AT1G17650","cyan","Glyoxylate reductase located in chloroplasts.","GLYOXYLATE REDUCTASE 2 (GLYR2)","GLYOXYLATE REDUCTASE 2 (GLYR2);GLYOXYLATE REDUCTASE 2 (GR2); (ATGLYR2)"]
["AT5G58960","cyan","Mutant plants display impaired light-regulation of the hypocotyl randomization response.","GRAVITROPIC IN THE LIGHT (GIL1)","GRAVITROPIC IN THE LIGHT (GIL1);CHIQUITA1-LIKE 10 (CHIQL10)"]
["AT5G13370","cyan","IBA - specific acyl acid amido synthetase which conjugates glutamine to IBA. It is involved in generating inactive and/or storage forms of IBA in the seedling, root, and silique. May play a role in auxin homeostasis by modulating the levels of IBA for peroxisomal conversion to IAA.","GRETCHEN HAGEN 3.15 (GH3.15)","GRETCHEN HAGEN 3.15 (GH3.15)"]
["AT3G13960","cyan","Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.","GROWTH-REGULATING FACTOR 5 (GRF5)","GROWTH-REGULATING FACTOR 5 (AtGRF5);GROWTH-REGULATING FACTOR 5 (GRF5)"]
["AT2G24560","cyan","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates.","GUARD-CELL-ENRICHED GDSL LIPASE 15 (GGL15)","GUARD-CELL-ENRICHED GDSL LIPASE 15 (GGL15)"]
["AT3G14220","cyan","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates.","GUARD-CELL-ENRICHED GDSL LIPASE 18 (GGL18)","GUARD-CELL-ENRICHED GDSL LIPASE 18 (GGL18)"]
["AT1G28660","cyan","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates.","GUARD-CELL-ENRICHED GDSL LIPASES (GGL2)","GUARD-CELL-ENRICHED GDSL LIPASES (GGL2);GUARD-CELL-ENRICHED GDSL LIPASE 4 (GGL4)"]
["AT3G10520","cyan","Encodes a class 2 non-symbiotic hemoglobin. Over-expression of AHb2 in seeds led to a 40% increase in the total fatty acid content of developing and mature seeds in three subsequent generations. This was mainly due to an increase in the poly-unsaturated C18:2 (omega-6) linoleic and C18:3 (omega-3) alpha-linolenic acids.","HAEMOGLOBIN 2 (HB2)","HAEMOGLOBIN 2 (AHB2);HEMOGLOBIN 2 (GLB2); (ARATH GLB2);NON-SYMBIOTIC HAEMOGLOBIN 2 (NSHB2);ARABIDOPSIS HEMOGLOBIN 2 (ATGLB2);HAEMOGLOBIN 2 (HB2);PHYTOGLOBIN2 (PGB2)"]
["AT1G28440","cyan","LRR-RLK protein involved in seed longevity. Induced by aging, mutant seeds show decreased germination rate upon aging treatment.","HAESA-LIKE 1 (HSL1)","HAESA-LIKE 1 (HSL1)"]
["AT1G48605","cyan","Encodes a protein similar to yeast HAL3, which regulates the cell cycle and tolerance to salt stress through inhibition of the PPZ1 type-1 protein phosphatase. AtHAL3b mRNA levels are induced by salt stress. HAL3B presumably encodes for phosphopantothenoylcysteine decarboxylase being involved in Coenzyme A biosynthesis as indicated by functional complementation of a double mutant hal3 aaBb.","(ATHAL3B)","HALOTOLERANCE DETERMINANT 3B (HAL3B);HALOTOLERANCE DETERMINANT 3 (HAL3); (ATHAL3B)"]
["AT1G50500","cyan","encodes a member of VPS53 family protein involved in the retrograde trafficking of vesicles to the late Golgi. Mutants in this gene are more sensitive to heat and osmotic stress.","HEAT-INTOLERANT 1 (HIT1)","HEAT-INTOLERANT 1 (HIT1)"]
["AT5G50740","cyan","Heavy metal transport/detoxification superfamily protein;(source:Araport11)","HEAVY METAL ASSOCIATED PROTEIN 52 (ATHMP52)","HEAVY METAL ASSOCIATED PROTEIN 52 (ATHMP52)"]
["AT5G67060","cyan","Encodes a bHLH transcription factor that is involved in transmitting tract and stigma development and acts as a local modulator of auxin and cytokinin responses to control gynoecium development. HEC1 affects auxin transport by acting as a transcriptional regulator of PIN1 and PIN3. Inhibits thermomorphogenesis.","HECATE 1 (HEC1)","HECATE 1 (HEC1)"]
["AT1G31860","cyan","encodes a bifunctional protein that has phosphoribosyl-ATP pyrophosphohydrolase (PRA-PH) and phosphoribosyl-AMP cyclohydrolase (PRA-CH) activities.","(AT-IE)","HISTIDINE BIOSYNTHESIS 2 (HISN2); (AT-IE)"]
["AT5G48545","cyan","Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.","HISTIDINE TRIAD NUCLEOTIDE-BINDING 3 (HINT3)","HISTIDINE TRIAD NUCLEOTIDE-BINDING 3 (HINT3)"]
["AT5G10400","cyan","Histone superfamily protein;(source:Araport11)","HISTONE 3.1 (H3.1)","HISTONE 3.1 (H3.1); (HTR9); (HTR13)"]
["AT5G22880","cyan","Encodes a histone 2B (H2B) protein. This protein can be ubiquitinated in planta, and this modification depends on the HUB1 and HUB2 E3 ubiquitin ligases.","HISTONE B2 (HTB2)","HISTONE B2 (HTB2);HISTONE H2B (H2B)"]
["AT4G33470","cyan","Encodes HDA14, a member of the histone deacetylase family proteins that can deacetylate a-tubulin, associates with a/b-tubulin and is retained on GTP/taxol-stabilized microtubules, at least in part, by direct association with the PP2A-A2 subunit. The association of a histone deacetylase with PP2A suggests a direct link between protein phosphorylation and acetylation. Class II RPD3-like family HDAC member which controls negative responses to salinity stress.","HISTONE DEACETYLASE 14 (hda14)","HISTONE DEACETYLASE 14 (hda14); (ATHDA14); (ATHDAC14);HISTONE DEACETYLASE 14 (HDAC14)"]
["AT1G08460","cyan","histone deacetylase 8;(source:Araport11)","HISTONE DEACETYLASE 8 (HDA08)","HISTONE DEACETYLASE 8 (HDA08); (ATHDA8);HISTONE DEACETYLASE 8 (HDA8)"]
["AT2G38810","cyan","Encodes HTA8, a histone H2A protein. Loss of all H2A.Z (triple mutant with HTA9 and HTA11) results in a reduction in DNA methylation of transposons but not that of genes. Loss of H2A.Z causes misregulation of many genes involved in the response to developmental and environmental cues, and that these genes tend to have high levels of gene-body H2A.Z.","HISTONE H2A 8 (HTA8)","HISTONE H2A 8 (HTA8); (H2A.Z)"]
["AT3G01470","cyan","Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf and hypocotyl development. Its promoter is bound by PIF1 which likely regulates its expression. Its translation is regulated by a conserved upstream ORF (CPuORF33).","HOMEOBOX 1 (HB-1)","HOMEOBOX 1 (ATHB-1);ARABIDOPSIS THALIANA HOMEOBOX 1 (ATHB1); (HD-ZIP-1);HOMEODOMAIN PROTEIN FROM ARABIDOIPSIS THALIANA 5 (HAT5);HOMEOBOX 1 (HB-1)"]
["AT3G61890","cyan","Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. Loss of function mutant has abnormally shaped leaves and stems.","HOMEOBOX 12 (HB-12)","HOMEOBOX 12 (ATHB-12);ARABIDOPSIS THALIANA HOMEOBOX 12 (ATHB12);HOMEOBOX 12 (HB-12);HOMEOBOX 12 (HB12)"]
["AT2G46680","cyan","encodes a putative transcription factor that contains a homeodomain closely linked to a leucine zipper motif. Transcript is detected in all tissues examined. Is transcriptionally regulated in an ABA-dependent manner and may act in a signal transduction pathway which mediates a drought response.","HOMEOBOX 7 (HB-7)","HOMEOBOX 7 (HB-7);HOMEOBOX 7 (ATHB-7);ARABIDOPSIS THALIANA HOMEOBOX 7 (ATHB7)"]
["AT1G75240","cyan","Encodes a zinc finger-homeodomain transcription factor ZHD5. Nuclear import and DNA binding of the ZHD5 transcription factor is modulated by a competitive peptide inhibitor MIF1 (AT1G74660).","HOMEOBOX PROTEIN 33 (HB33)","HOMEOBOX PROTEIN 33 (AtHB33);HOMEOBOX PROTEIN 33 (HB33);ZINC-FINGER HOMEODOMAIN 5 (ZHD5)"]
["AT5G65310","cyan","Encodes a class I HDZip (homeodomain-leucine zipper) protein that is a positive regulator of ABA-responsiveness, mediating the inhibitory effect of ABA on growth during seedling establishment.","HOMEOBOX PROTEIN 5 (HB5)","HOMEOBOX PROTEIN 5 (ATHB5);HOMEOBOX PROTEIN 5 (HB5); (ATHB-5)"]
["AT5G55280","cyan","Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis. It is involved in chloroplast division.","HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1 (FTSZ1-1)","HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1 (FTSZ1-1); (FTSZ1);ARABIDOPSIS THALIANA HOMOLOG OF BACTERIAL CYTOKINESIS Z-RING PROTEIN FTSZ 1-1 (ATFTSZ1-1);CHLOROPLAST FTSZ (CPFTSZ)"]
["AT1G55805","cyan","BolA-like family protein;(source:Araport11)","HOMOLOG OF E.COLI BOLA 1 (BOLA1)","HOMOLOG OF E.COLI BOLA 2 (BOLA2);HOMOLOG OF E.COLI BOLA 1 (BOLA1)"]
["AT5G17560","cyan","BolA-like family protein;(source:Araport11)","HOMOLOG OF E.COLI BOLA 4 (BOLA4)","HOMOLOG OF E.COLI BOLA 4 (BOLA4)"]
["AT5G08110","cyan","Plays a role in the maintenance of genome stability and the repair of aberrant replication intermediates in the root meristem. Is involved with RAD1, FAN1, and RECQ4A in the repair of DNA CLs.","HOMOLOGOUS TO RECQ HELICASE 1 (HRQ1)","HOMOLOGOUS TO RECQ HELICASE 1 (HRQ1)"]
["AT1G69390","cyan","Encodes an Arabidopsis homologue of the bacterial MinE topological specificity factor ensuring correct division site placement. It is an essential integral component of the plastid division machinery.","HOMOLOGUE OF BACTERIAL MINE 1 (MINE1)","HOMOLOGUE OF BACTERIAL MINE 1 (ATMINE1);HOMOLOGUE OF BACTERIAL MINE 1 (MINE1);ACCUMULATION AND REPLICATION OF CHLOROPLASTS 12 (ARC12)"]
["AT4G13940","cyan","Encodes a S-adenosyl-L-homocysteine hydrolase required for DNA methylation-dependent gene silencing. The mRNA is cell-to-cell mobile.","HOMOLOGY-DEPENDENT GENE SILENCING 1 (HOG1)","HOMOLOGY-DEPENDENT GENE SILENCING 1 (HOG1); (SAH1);EMBRYO DEFECTIVE 1395 (EMB1395);S-ADENOSYL-L-HOMOCYSTEIN HYDROLASE 1 (SAHH1);MATERNAL EFFECT EMBRYO ARREST 58 (MEE58);S-ADENOSYL-L-HOMOCYSTEIN HYDROLASE 1 (ATSAHH1)"]
["AT3G16360","cyan","Encodes AHP4, a histidine-containing phosphotransmitter involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHP4 is one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).","HPT PHOSPHOTRANSMITTER 4 (AHP4)","HPT PHOSPHOTRANSMITTER 4 (AHP4)"]
["AT1G49560","cyan","Homeodomain-like superfamily protein;(source:Araport11)","HRS1 HOMOLOG6 (HHO6)","HRS1 HOMOLOG6 (HHO6)"]
["AT1G76490","cyan","Encodes a 3-hydroxy-3-methylglutaryl coenzyme A reductase, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine The mRNA is cell-to-cell mobile.","HYDROXY METHYLGLUTARYL COA REDUCTASE 1 (HMG1)","HYDROXY METHYLGLUTARYL COA REDUCTASE 1 (HMG1);3-HYDROXY-3-METHYLGLUTARYL COA REDUCTASE 1 (HMGR1); (AtHMGR1);MIRNA ACTION DEFICIENT 3 (MAD3)"]
["AT2G45630","cyan","Hydroxyphenylpyruvate reductase (HPPR) family member with low activity.","HYDROXYPHENYLPYRUVATE REDUCTASE 4 (HPPR4)","HYDROXYPHENYLPYRUVATE REDUCTASE 4 (HPPR4)"]
["AT1G68010","cyan","Encodes hydroxypyruvate reductase.","HYDROXYPYRUVATE REDUCTASE (HPR)","HYDROXYPYRUVATE REDUCTASE (HPR)"]
["AT1G67700","cyan","multidrug resistance protein;(source:Araport11)","HYPERSENSITIVE TO HIGH LIGHT 1 (HHL1)","HYPERSENSITIVE TO HIGH LIGHT 1 (HHL1)"]
["AT1G09700","cyan","Encodes a nuclear dsRNA binding protein. Involved in mRNA cleavage. The mutant is characterized by shorter stature, delayed flowering, leaf hyponasty, reduced fertility, decreased rate of root growth, and an altered root gravitropic response. It also exhibits less sensitivity to auxin and cytokinin.","HYPONASTIC LEAVES 1 (HYL1)","HYPONASTIC LEAVES 1 (HYL1);DSRNA-BINDING PROTEIN 1 (DRB1); (ATDRB1)"]
["AT5G55510","cyan","PRAT protein family which has a unique system for importing and exporting proteins from chloroplasts. Acts in the export of proteins from chloroplasts during leaf senescence.","HYPOTHETICAL PROTEIN 22 (HP22)","HYPOTHETICAL PROTEIN 22 (HP22)"]
["AT1G33055","cyan","hypothetical protein;(source:Araport11)","HYPOXIA RESPONSE UNKNOWN PROTEIN 32 (HUP32)","HYPOXIA RESPONSE UNKNOWN PROTEIN 32 (HUP32)"]
["AT2G04700","cyan","Encodes catalytic subunit of ferredoxin/thioredoxin reductase.","IMBALANCED NADP STATUS 1 (INAP1)","IMBALANCED NADP STATUS 1 (INAP1);FERREDOXIN/THIOREDOXIN REDUCTASE CATAYLTIC SUBUNIT (FTRB)"]
["AT5G67100","cyan","Encodes the putative catalytic subunit of the DNA polymerase alpha. Interacts with genes involved in chromatin-mediated cellular memory. ICU2 genetically interacts with TERMINAL FLOWER2, the ortholog of HETEROCHROMATIN PROTEIN1 of animals and yeasts, and with the Polycomb group (PcG) gene CURLY LEAF. A number of regulatory genes were derepressed in the icu2-1 mutant, including genes associated with flowering time, floral meristem, and floral organ identity. Mutant has curled, involute leaves and causes early flowering.","INCURVATA2 (ICU2)","INCURVATA2 (ICU2)"]
["AT1G21130","cyan","O-methyltransferase family protein;(source:Araport11)","INDOLE GLUCOSINOLATE O-METHYLTRANSFERASE 4 (IGMT4)","INDOLE GLUCOSINOLATE O-METHYLTRANSFERASE 4 (IGMT4)"]
["AT1G76790","cyan","Encodes a protein with similarity to N-acetylserotonin O-methyltransferase (ASMT) but it does not have ASMT activity in vitro.","INDOLE GLUCOSINOLATE O-METHYLTRANSFERASE 5 (IGMT5)","INDOLE GLUCOSINOLATE O-METHYLTRANSFERASE 5 (IGMT5)"]
["AT4G14430","cyan","Encodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation. This enzyme might also be involved in the conversion of indole-3-butyric acid to indole-3-acetic acid via a beta-oxidation-like pathway.","INDOLE-3-BUTYRIC ACID RESPONSE 10 (IBR10)","INDOLE-3-BUTYRIC ACID RESPONSE 10 (IBR10); (PEC12);ENOYL-COA HYDRATASE/ISOMERASE B (ECHIB);DELTA(3), DELTA(2)-ENOYL COA ISOMERASE 2 (ECI2);ARABIDOPSIS THALIANA DELTA(3), DELTA(2)-ENOYL COA ISOMERASE 2 (ATECI2)"]
["AT2G43330","cyan","Encodes a tonoplast-localized myo-inositol exporter, involved in efflux of myo-inositol from the vacuole to the cytosol. The gene is ubiquitously expressed. Reduced root growth in knock-out mutants grown on low inositol agar medium.","INOSITOL TRANSPORTER 1 (INT1)","INOSITOL TRANSPORTER 1 (ATINT1);INOSITOL TRANSPORTER 1 (INT1)"]
["AT3G22190","cyan","Member of IQ67 (CaM binding) domain containing family.","IQ-DOMAIN 5 (IQD5)","IQ-DOMAIN 5 (IQD5)"]
["AT1G80560","cyan","The AtIMD2 is one out of 3 genes encoding the enzyme 3-isopropylmalate dehydrogenase involved in leucine biosynthesis in Arabidopsis. Its subcellular location has been targeted to plastids. The mRNA is cell-to-cell mobile.","ISOPROPYLMALATE DEHYDROGENASE 2 (IMD2)","ISOPROPYLMALATE DEHYDROGENASE 2 (IMD2);ARABIDOPSIS ISOPROPYLMALATE DEHYDROGENASE 2 (ATIMD2)"]
["AT2G39310","cyan","jacalin-related lectin 22;(source:Araport11)","JACALIN-RELATED LECTIN 22 (JAL22)","JACALIN-RELATED LECTIN 22 (JAL22)"]
["AT3G16430","cyan","Encodes a protein that increases the beta-glucosidase activities of three scopolin glucosidases in vitro.","JACALIN-RELATED LECTIN 31 (JAL31)","JACALIN-RELATED LECTIN 31 (JAL31); (PBPII)"]
["AT3G16450","cyan","Mannose-binding lectin superfamily protein;(source:Araport11)","JACALIN-RELATED LECTIN 33 (JAL33)","JACALIN-RELATED LECTIN 33 (JAL33)"]
["AT3G16460","cyan","Mannose-binding protein","JACALIN-RELATED LECTIN 34 (JAL34)","JACALIN-RELATED LECTIN 34 (JAL34)"]
["AT1G75100","cyan","Contains a J-domain at the C-terminus which is similar to the J-domain of auxilin, a clathrin-uncoating factor in cow, yeast and worm. Arabidopsis contains 6 other proteins similar to auxilin. Expressed in leaves and stems, but not in roots. Localized in the cytoplasm. Required for the chloroplast accumulation response, but not for the avoidance response. No molecular function known. Influences the composition of photosynthetic pigments, the efficiency of photosynthesis, and the CO2 uptake rate. Positive effect on water use efficiency (WUE) by reducing stomatal aperture and water vapor conductance; involved in the fine-tuning of H2O2 foliar levels, antioxidant enzymes activities and cell death after UV-C photooxidative stress.","J-DOMAIN PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1 (JAC1)","J-DOMAIN PROTEIN REQUIRED FOR CHLOROPLAST ACCUMULATION RESPONSE 1 (JAC1);AUXILIN-LIKE6 (AUXILIN-LIKE6)"]
["AT1G60160","cyan","Member of the KT/KUP/HAK family of proton-coupled potassium transporters which have potential effect on cellular expansion.","K TRANSPORTER12 (KT12)","K TRANSPORTER12 (KT12)"]
["AT1G01790","cyan","Encodes a member of the cation/proton antiporters-2 antiporter superfamily, the K efflux antiporter KEA1 that is localized to the chloroplast envelope.","K+ EFFLUX ANTIPORTER 1 (KEA1)","K+ EFFLUX ANTIPORTER 1 (ATKEA1);K+ EFFLUX ANTIPORTER 1 (KEA1)"]
["AT3G02050","cyan","potassium transporter KUP3p (KUP3)","K+ UPTAKE TRANSPORTER 3 (KUP3)","K+ UPTAKE TRANSPORTER 3 (KUP3); (ATKUP3);ARABIDOPSIS THALIANA POTASSIUM TRANSPORTER 4 (ATKT4)"]
["AT3G27960","cyan","CMU1 and CMU2 along with FRA1 contributes to lateral stability of cortical microtubules.","KINESIN LIGHT CHAIN-RELATED 2 (KLCR2)","KINESIN LIGHT CHAIN-RELATED 2 (KLCR2); (CMU2)"]
["AT1G11755","cyan","Encodes a cis-prenyltransferase, involved in dolichol biosynthesis. Wilted leaves in mutants due to cell membrane lesions. Mutants have increased drought tolerance, but hypersensitve to dark stress.","LEAF WILTING 1 (LEW1)","LEAF WILTING 1 (LEW1)"]
["AT3G14470","cyan","NB-ARC domain-containing disease resistance protein;(source:Araport11)","LEUCINE RICH REPEAT PROTEIN 1 (LRR4)","LEUCINE RICH REPEAT PROTEIN 1 (LRR4)"]
["AT4G22880","cyan","encodes leucoanthocyanidin dioxygenase, which is involved in proanthocyanin biosynthesis. Mutant analysis suggests that this gene is also involved in vacuole formation.","LEUCOANTHOCYANIDIN DIOXYGENASE (LDOX)","LEUCOANTHOCYANIDIN DIOXYGENASE (LDOX);TANNIN DEFICIENT SEED 4 (TDS4); (TT18);ANTHOCYANIDIN SYNTHASE (ANS)"]
["AT1G01220","cyan","Encodes a bifunctional enzyme that has both L-fucokinase and GDP-L-fucose pyrophosphorylase activities. It catalyzes the two steps of the L-fucose salvage pathway for the generation of activated GDP-L-fucose. This pathway seems to be of minor importance for cell wall polysaccharide biosynthesis compared to the de novo GDP-L-fucose biosynthesis pathway in Arabidopsis.","L-FUCOKINASE/GDP-L-FUCOSE PYROPHOSPHORYLASE (FKGP)","L-FUCOKINASE/GDP-L-FUCOSE PYROPHOSPHORYLASE (FKGP);ARABIDOPSIS THALIANA L-FUCOKINASE/GDP-L-FUCOSE PYROPHOSPHORYLASE (AtFKGP)"]
["AT5G01530","cyan","Light harvesting chlorophyll-binding protein, CP29 is a component of the PSII light harvesting antenna complex.","LIGHT HARVESTING COMPLEX PHOTOSYSTEM II (LHCB4.1)","LIGHT HARVESTING COMPLEX PHOTOSYSTEM II (LHCB4.1)"]
["AT4G17600","cyan","Encodes Lil3:1 (light-harvesting-like) protein. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus. A generic LHC motif is present in Lil3:1. The mRNA is cell-to-cell mobile.","LIGHT-HARVESTING-LIKE 3:1 (LIL3:1)","LIGHT-HARVESTING-LIKE 3:1 (LIL3:1)"]
["AT5G47110","cyan","Encodes a light-harvesting-like protein that is involved in chlorophyll and tocopherol biosynthesis anchoring geranylgeranyl reductase in the thylakoid membrane.","LIGHT-HARVESTING-LIKE 3:2 (LIL3:2)","LIGHT-HARVESTING-LIKE 3:2 (LIL3:2)"]
["AT1G71500","cyan","Encodes PSB33, a protein conserved in the plastid lineage. PSB33 is associated with the chloroplast thylakoid membrane and provides stability to Photosystem II. The mRNA is cell-to-cell mobile.","PHOTOSYSTEM B PROTEIN 33 (PSB33)","LIGHT-HARVESTING-LIKE 8 (LIL8);PHOTOSYSTEM B PROTEIN 33 (PSB33)"]
["AT3G01510","cyan","Encodes a putative phosphatase, LSF1, required for normal starch turnover in leaves.","LIKE SEX4 1 (LSF1)","LIKE SEX4 1 (LSF1)"]
["AT2G38540","cyan","Non-specific lipid transfer protein. Binds calmodulin in a Ca2+-independent manner. Localized to the cell wall. Specifically expressed in L1 epidermal layer. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15. The mRNA is cell-to-cell mobile.","LIPID TRANSFER PROTEIN 1 (LP1)","LIPID TRANSFER PROTEIN 1 (LP1);LIPID TRANSFER PROTEIN 1 (LTP1);ARABIDOPSIS THALIANA LIPID TRANSFER PROTEIN 1 (ATLTP1); (ATLTPI-4)"]
["AT2G04560","cyan","transferases, transferring glycosyl groups;(source:Araport11)","LIPID X B (LPXB)","LIPID X B (LPXB); (ATLPXB)"]
["AT3G45140","cyan","Chloroplast lipoxygenase required for wound-induced jasmonic acid accumulation in Arabidopsis.Mutants are resistant to Staphylococcus aureus and accumulate salicylic acid upon infection. The mRNA is cell-to-cell mobile.","LIPOXYGENASE 2 (LOX2)","LIPOXYGENASE 2 (LOX2);ARABIODOPSIS THALIANA LIPOXYGENASE 2 (ATLOX2)"]
["AT4G35190","cyan","Putative lysine decarboxylase family protein;(source:Araport11)","LONELY GUY 5 (LOG5)","LONELY GUY 5 (LOG5)"]
["AT2G46090","cyan","Encodes a putative sphingosine kinase (SphK) containing the five conserved domains (C1-C5) previously identified in SphKs.","LONG-CHAIN BASE (LCB) KINASE 2 (LCBK2)","LONG-CHAIN BASE (LCB) KINASE 2 (LCBK2)"]
["AT5G15580","cyan","Encodes LONGIFOLIA1 (LNG1). Regulates leaf morphology by promoting cell expansion in the leaf-length direction. The LNG1 homologue LNG2 (At3g02170) has similar function.","LONGIFOLIA1 (LNG1)","LONGIFOLIA1 (LNG1); (ATLNG1);TON1 RECRUITING MOTIF 2 (TRM2)"]
["AT5G58250","cyan","Involved in tetrapyrrole biosynthesis. May function as a scaffold protein to stabilize CHL27.","EMBRYO DEFECTIVE 3143 (EMB3143)","LOW CHLOROPHYLL ACCUMULATION/HYPOTHETICAL CHLOROPLAST OPEN READING FRAME 54 (LCAA/YCF54);EMBRYO DEFECTIVE 3143 (EMB3143)"]
["AT1G75690","cyan","Thylakoid Thiol/Disulfide-Modulating Protein.","LOW QUANTUM YIELD OF PHOTOSYSTEM II 1 (LQY1)","LOW QUANTUM YIELD OF PHOTOSYSTEM II 1 (LQY1)"]
["AT5G10530","cyan","Concanavalin A-like lectin protein kinase family protein;(source:Araport11)","L-TYPE LECTIN RECEPTOR KINASE IX.1 (LECRK-IX.1)","L-TYPE LECTIN RECEPTOR KINASE IX.1 (LECRK-IX.1)"]
["AT2G43700","cyan","Concanavalin A-like lectin protein kinase family protein;(source:Araport11)","L-TYPE LECTIN RECEPTOR KINASE V.4 (LECRK-V.4)","L-TYPE LECTIN RECEPTOR KINASE V.4 (LECRK-V.4)"]
["AT5G57030","cyan","Lutein-deficient 2 (LUT2) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Encodes lycopene epsilon cyclase","LUTEIN DEFICIENT 2 (LUT2)","LUTEIN DEFICIENT 2 (LUT2)"]
["AT1G14030","cyan","Encodes a lysine methyltransferase whose main soluble physiological substrates are chloroplastic fructose 1,6-bisphosphate aldolases, FBA1, FBA2, and FBA3. Lysines near the C-terminal end of the target proteins are trimethylated.","LYSINE METHYLTRANSFERASE (LSMT)-LIKE (LSMT-L)","LYSINE METHYLTRANSFERASE (LSMT)-LIKE (LSMT-L)"]
["AT3G18850","cyan","lysophosphatidyl acyltransferase 5;(source:Araport11)","LYSOPHOSPHATIDYL ACYLTRANSFERASE 5 (LPAT5)","LYSOPHOSPHATIDYL ACYLTRANSFERASE 5 (LPAT5)"]
["AT3G11710","cyan","lysyl-tRNA synthetase 1;(source:Araport11)","LYSYL-TRNA SYNTHETASE 1 (ATKRS-1)","LYSYL-TRNA SYNTHETASE 1 (ATKRS-1)"]
["AT5G45930","cyan","encodes a second Chl I gene (CHLI2), a subunit of magnesium chelatase which is required for chlorophyll biosynthesis. Has ATPase activity, regulated by TRX-f. Involved in the assembly of the Mg chelatase complex.","MAGNESIUM CHELATASE I2 (CHLI2)","MAGNESIUM CHELATASE I2 (CHLI2); (CHL I2); (CHLI-2)"]
["AT2G21870","cyan","Encodes the FAd subunit of mitochondrial F1F0-ATP synthase. Essential for pollen formation.","MALE GAMETOPHYTE DEFECTIVE 1 (MGP1)","MALE GAMETOPHYTE DEFECTIVE 1 (MGP1);PHOSPHITE-INSENSITIVE 1 (PHI1)"]
["AT5G17520","cyan","Encodes a maltose transporter that is expressed in leaves and roots. Mutations at the MEX1 locus cause accumulation of both starch and maltose in leaves, with maltose levels at least 40 times higher than that of wild-type. This gene encodes a protein located in the chloroplast envelope.","ROOT CAP 1 (RCP1)","MALTOSE EXCESS 1 (MEX1);ROOT CAP 1 (RCP1)"]
["AT1G78850","cyan","curculin-like (mannose-binding) lectin family protein, low similarity to ser/thr protein kinase from Zea mays (GI:2598067); contains Pfam lectin (probable mannose binding) domain PF01453 but not the protein kinase domain of the Z. mays protein. Belongs to GNA domain lectin family. Enhances PAP26 function to facilitate Pi-scavenging by Pi-starved plants.","MANNOSE BINDING LECTIN1 (MBL1)","MANNOSE BINDING LECTIN1 (MBL1);APPLE DOMAIN LECTIN-1 (GAL1)"]
["AT3G16000","cyan","Encodes a DNA-binding protein that binds to plastid DNA non-specifically and is associated with nucleoids and thylakoid membranes. The expression of the gene is correlated with the development of thylakoid membranes.MFP1 is required for the normal initiation of starch granules in Arabidopsis chloroplasts. Mutants lacking MFP1 have fewer starch granules per chloroplast relative to wild-type plants. MFP1 interacts with PTST2 (At1g27070), which is also involved in starch granule initiation. MFP1 is required for proper PTST2 location within the chloroplast.","MAR BINDING FILAMENT-LIKE PROTEIN 1 (MFP1)","MAR BINDING FILAMENT-LIKE PROTEIN 1 (MFP1)"]
["AT2G01620","cyan","RNI-like superfamily protein;(source:Araport11)","MATERNAL EFFECT EMBRYO ARREST 11 (MEE11)","MATERNAL EFFECT EMBRYO ARREST 11 (MEE11)"]
["AT2G34850","cyan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)","MATERNAL EFFECT EMBRYO ARREST 25 (MEE25)","MATERNAL EFFECT EMBRYO ARREST 25 (MEE25)"]
["AT3G10110","cyan","Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein;(source:Araport11)","MATERNAL EFFECT EMBRYO ARREST 67 (MEE67)","MATERNAL EFFECT EMBRYO ARREST 67 (MEE67); (ATTIM22-2)"]
["AT5G58230","cyan","Encodes a WD-40 repeat containing protein that functions in chromatin assembly as part of the CAF1 and FIE complex. Mutants exhibit parthenogenetic development that includes proliferation of unfertilized endosperm and embryos. In heterozygous plants 50% of embryos abort. Of the aborted embryos the early aborted class are homozygous and the later aborting lass are heterozygotes in which the defective allele is maternally transmitted. Other phenotypes include defects in ovule morphogenesis and organ initiation,as well as increased levels of heterochromatic DNA. MSI1 is needed for the transition to flowering. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. In the ovule, the MSI1 transcripts are accumulated at their highest level before fertilization and gradually decrease after fertilization. MSI is biallelically expressed, the paternall allele is expressed in the endosperm and embryo and is not imprinted. MSI1 forms a complex with RBR1 that is required for activation of the imprinted genes FIS2 and FWA. This activation is mediated by MSI1/RBR1 mediated repression of MET1.","MULTICOPY SUPRESSOR OF IRA1 (MSI1)","MATERNAL EFFECT EMBRYO ARREST 70 (MEE70);ARABIDOPSIS MULTICOPY SUPRESSOR OF IRA1 (ATMSI1);MULTICOPY SUPRESSOR OF IRA1 (MSI1)"]
["AT4G34830","cyan","Encodes MRL1, a conserved pentatricopeptide repeat protein, required for stabilization of rbcL mRNA.","MATURATION OF RBCL 1 (MRL1)","MATURATION OF RBCL 1 (MRL1);PIGMENT DEFECTIVE 346 (PDE346)"]
["AT5G23820","cyan","ML3 can be modified by NEDD8 and ubiquitin. ML3 expression is regulated by NAI1. ML3 expression is regulated by MeJA, ethylene and wounding. ml3-3 is more susceptible against infections with Alternaria brassicicola and more resistant against infections with Pseudomonas syringae DC3000.","MD2-RELATED LIPID RECOGNITION 3 (ML3)","MD2-RELATED LIPID RECOGNITION 3 (ML3)"]
["AT4G08850","cyan","MIK1 encodes a receptor kinase that forms a complex with MDIS1/MIK2 and binds LURE1, the female pollen guidance chemi-attractant. MIK1 phosphorylates MDIS1 and is autophosphorylated.","MDIS1-INTERACTING RECEPTOR LIKE KINASE2 (MIK2)","MDIS1-INTERACTING RECEPTOR LIKE KINASE2 (MIK2)"]
["AT1G53470","cyan","mechanosensitive channel of small conductance-like 4;(source:Araport11)","MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 4 (MSL4)","MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 4 (MSL4)"]
["AT3G63210","cyan","encodes a novel zinc-finger protein with a proline-rich N-terminus, identical to senescence-associated protein SAG102","MEDIATOR OF ABA-REGULATED DORMANCY 1 (MARD1)","MEDIATOR OF ABA-REGULATED DORMANCY 1 (MARD1); (MARD1)"]
["AT3G14390","cyan","Meso-diaminopimelate decarboxylase which catalyzes the decarboxylation of mesodiaminopimelate, the final reaction in the diaminopimelate L-lysine biosynthetic pathway.","MESO-DIAMINOPIMELATE DECARBOXYLASE 1 (DAPDC1)","MESO-DIAMINOPIMELATE DECARBOXYLASE 1 (DAPDC1)"]
["AT5G11880","cyan","Meso-diaminopimelate decarboxylase which catalyzes the decarboxylation of mesodiaminopimelate, the final reaction in the diaminopimelate L-lysine biosynthetic pathway.","MESO-DIAMINOPIMELATE DECARBOXYLASE 2 (DAPDC2)","MESO-DIAMINOPIMELATE DECARBOXYLASE 2 (DAPDC2)"]
["AT5G64240","cyan","Encodes a type I metacaspase. Two Arabidopsis metacaspases, AT1G02170 (MC1) and AT4G25110 (MC2) antagonistically control programmed cell death in Arabidopsis. MC1 is a positive regulator of cell death and requires conserved caspase-like putative catalytic residues for its function. MC2 negatively regulates cell death. This function is independent of the putative catalytic residues. A third type I Arabidopsis metacaspase is MC3 (AT5g64240).","METACASPASE 3 (MC3)","METACASPASE 3 (AtMC3);METACASPASE 1A (AtMCP1a);METACASPASE 1A (MCP1a);METACASPASE 3 (MC3)"]
["AT1G13270","cyan","Encodes a methionine aminopeptidase formerly called MAP1B, renamed to MAP1C.","METHIONINE AMINOPEPTIDASE 1B (MAP1C)","METHIONINE AMINOPEPTIDASE 1B (MAP1B);METHIONINE AMINOPEPTIDASE 1B (MAP1C)"]
["AT5G59380","cyan","Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins. The mRNA is cell-to-cell mobile.","METHYL-CPG-BINDING DOMAIN 6 (MBD6)","METHYL-CPG-BINDING DOMAIN 6 (MBD6); (ATMBD6)"]
["AT3G12290","cyan","MTHFD1 encodes a cytoplasmic bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase that is involved in one carbon metabolism and control of DNA methylation.","METHYLENETETRAHYDROFOLATE DEHYDROGENASE/METHENYLTETRAHYDROFOLATE CYCLOHYDROLASE (MTHFD1)","METHYLENETETRAHYDROFOLATE DEHYDROGENASE/METHENYLTETRAHYDROFOLATE CYCLOHYDROLASE (MTHFD1)"]
["AT1G44900","cyan","Encodes MCM2 (MINICHROMOSOME MAINTENANCE 2), a protein essential to embryo development. Overexpression results in altered root meristem function.","MINICHROMOSOME MAINTENANCE 2 (MCM2)","MINICHROMOSOME MAINTENANCE 2 (MCM2); (ATMCM2)"]
["AT5G46280","cyan","Involved in the replication of mungbean yellow mosaic India virus (MYMIV) DNA through an ex vivo system.","MINICHROMOSOME MAINTENANCE 3 (MCM3)","MINICHROMOSOME MAINTENANCE 3 (MCM3)"]
["AT2G16440","cyan","Regulates DNA replication via interaction with BICE1 and MCM7.","MINICHROMOSOME MAINTENANCE 4 (MCM4)","MINICHROMOSOME MAINTENANCE 4 (MCM4)"]
["AT2G07690","cyan","Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.","MINICHROMOSOME MAINTENANCE 5 (MCM5)","MINICHROMOSOME MAINTENANCE 5 (MCM5)"]
["AT5G44635","cyan","minichromosome maintenance (MCM2/3/5) family protein;(source:Araport11)","MINICHROMOSOME MAINTENANCE 6 (MCM6)","MINICHROMOSOME MAINTENANCE 6 (MCM6)"]
["AT1G20050","cyan","C-8 sterol isomerase that also plays a role in miRNA function.","HYDRA1 (HYD1)","MIRNA ACTION DEFICIENT 4 (MAD4);HYDRA1 (HYD1)"]
["AT3G63150","cyan","Encodes a calcium binding GTPases that is localized to the mitochondrion and is involved in salt stress response.","MIRO-RELATED GTP-ASE 2 (MIRO2)","MIRO-RELATED GTP-ASE 2 (MIRO2);CALCIUM BINDING GTP-ASE (ATCBG)"]
["AT1G65290","cyan","Encodes a member of the mitochondrial acyl carrier protein (ACP) family that forms part of the membrane arm of mitochondrial complex and contributes to the mitochondrial respiratory chain. The mRNA is cell-to-cell mobile. The designations of mtACP-1 and mtACP-2 in Klusch et al. 2021 (DOI:10.1093/plcell/koab092)are flipped with respect to the nomenclature published by Meyer et al. 2007 (DOI:10.1007/s11103-007-9156-9).","MITOCHONDRIAL ACYL CARRIER PROTEIN 2 (mtACP2)","MITOCHONDRIAL ACYL CARRIER PROTEIN 2 (mtACP2)"]
["AT5G47630","cyan","Encodes a member of the mitochondrial acyl carrier protein (ACP) family. Its role is currently obscure as it is weakly expressed and has not yet been identified by mitochondrial proteome analysis.","MITOCHONDRIAL ACYL CARRIER PROTEIN 3 (mtACP3)","MITOCHONDRIAL ACYL CARRIER PROTEIN 3 (mtACP3)"]
["AT3G26780","cyan","Encodes MEF14 (mitochondrial editing factor 14), a PPR (pentatricopeptide repeat proteins) protein required for RNA editing at site matR-1895 in mitochondria. The mRNA is cell-to-cell mobile.","MITOCHONDRIAL EDITING FACTOR 14 (MEF14)","MITOCHONDRIAL EDITING FACTOR 14 (MEF14)"]
["AT1G48030","cyan","Encodes a mitochondrial lipoamide dehydrogenase whose expression is induced by light.","MITOCHONDRIAL LIPOAMIDE DEHYDROGENASE 1 (mtLPD1)","MITOCHONDRIAL LIPOAMIDE DEHYDROGENASE 1 (mtLPD1)"]
["AT5G14040","cyan","Encodes a mitochondrial phosphate transporter. Modulates plant responses to salt stress.","PHOSPHATE TRANSPORTER 3;1 (PHT3;1)","MITOCHONDRIAL PHOSPHATE TRANSPORTER 3 (MPT3);PHOSPHATE TRANSPORTER 3;1 (PHT3;1)"]
["AT3G16480","cyan","mitochondrial processing peptidase alpha subunit;(source:Araport11)","MITOCHONDRIAL PROCESSING PEPTIDASE ALPHA SUBUNIT (MPPalpha)","MITOCHONDRIAL PROCESSING PEPTIDASE ALPHA SUBUNIT (MPPalpha)"]
["AT3G22670","cyan","Encodes an essential mitochondrial splicing cofactor required for nad2 mRNA processing and embryo develop\u0002ment.","MITOCHONDRIAL SPLICING FACTOR 2 (MISF2)","MITOCHONDRIAL SPLICING FACTOR 2 (MISF2)"]
["AT5G42130","cyan","Encodes a protein belonging to the mitochondrial carrier family and similar to animal mitoferrin but likely NOT to be located in the mitochondria, but rather in chloroplasts. It is likely to be involved in transporting iron into the chloroplast.","MITOFERRINLIKE1 (Mfl1)","MITOFERRINLIKE1 (Mfl1); (AtMfl1)"]
["AT1G51660","cyan","Encodes a mitogen-activated map kinase kinase (there are nine in Arabidopsis) involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK5. In plants with both MKK5 and MKK4 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission. The mRNA is cell-to-cell mobile.","MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 (MKK4)","MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 (MKK4);ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 (ATMEK4);ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 (ATMKK4)"]
["AT1G70830","cyan","MLP-like protein 28;(source:Araport11)","MLP-LIKE PROTEIN 28 (MLP28)","MLP-LIKE PROTEIN 28 (MLP28)"]
["AT1G63940","cyan","Monodehydroascorbate reductase 6","MONODEHYDROASCORBATE REDUCTASE 6 (MDAR6)","MONODEHYDROASCORBATE REDUCTASE 6 (MDAR6)"]
["AT4G31780","cyan","Encodes an A-type monogalactosyldiacylglycerol (MGDG) synthase. It represents the isoform responsible for the bulk of MGDG synthesis in Arabidopsis.","EMBRYO DEFECTIVE 2797 (EMB2797)","MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 1 (MGD1);EMBRYO DEFECTIVE 2797 (EMB2797)"]
["AT5G51350","cyan","Encodes a receptor-like kinase that represses secondary growth, the production of secondary vascular tissues.","MORE LATERAL GROWTH1 (MOL1)","MORE LATERAL GROWTH1 (MOL1)"]
["AT4G14605","cyan","Encodes a putative mitochondrial transcription termination factor whose mutation results in plants that exhibit altered chloroplast morphology and plant growth, and reduced pigmentation of cotyledons, leaves, stems and sepals.","MTERF DEFECTIVE IN ARABIDOPSIS1 (MDA1)","MTERF DEFECTIVE IN ARABIDOPSIS1 (MDA1)"]
["AT1G53480","cyan","Encodes MRD1 (mto 1 responding down). Down-regulated in mto1-1 mutant that over-accumulates soluble methionine.","MTO 1 RESPONDING DOWN 1 (MRD1)","MTO 1 RESPONDING DOWN 1 (MRD1);ARABIDOPSIS MTO 1 RESPONDING DOWN 1 (ATMRD1)"]
["AT2G47000","cyan","Encodes an auxin efflux transmembrane transporter that is a member of the multidrug resistance P-glycoprotein (MDR/PGP) subfamily of ABC transporters. Functions in the basipetal redirection of auxin from the root tip. Exhibits apolar plasma membrane localization in the root cap and polar localization in tissues above and is involved in root hair elongation.","ATP-BINDING CASSETTE B4 (ABCB4)","MULTIDRUG RESISTANCE 4 (MDR4);P-GLYCOPROTEIN 4 (PGP4);ARABIDOPSIS P-GLYCOPROTEIN 4 (ATPGP4);ATP-BINDING CASSETTE B4 (ABCB4); (ATABCB4)"]
["AT3G13090","cyan","member of MRP subfamily","ATP-BINDING CASSETTE C6 (ABCC6)","MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 8 (ATMRP8);ATP-BINDING CASSETTE C6 (ABCC6);MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 8 (MRP8)"]
["AT3G24495","cyan","encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH7 exhibit moderate affinity for a (T/G) substrate and weak binding of (+T), suggesting MSH2*MSH7 may be specialized for lesions/base mispairs not tested or for (T/G) mispairs in special contexts.","MUTS HOMOLOG 7 (MSH7)","MUTS HOMOLOG 7 (MSH7);MUTS HOMOLOG 6-2 (MSH6-2);ARABIDOPSIS THALIANA MUTS HOMOLOG 7 (ATMSH7)"]
["AT3G09230","cyan","member of MYB3R- and R2R3- type MYB- encoding genes, degraded by the 26S proteasome, likely facilitated by a CUL3-based E3 ligase that uses MATH-BTB/POZ proteins as substrate adaptors.","MYB DOMAIN PROTEIN 1 (MYB1)","MYB DOMAIN PROTEIN 1 (AtMYB1);MYB DOMAIN PROTEIN 1 (MYB1);SALT-RELATED MYB1 (SRM1)"]
["AT5G18650","cyan","Encodes a RING-type E3 ubiquitin ligase that interacts with and ubiquitinates MYB30, leads to MYB30 proteasomal degradation and downregulation of its transcriptional activity. Since MYB30 is a positive regulator of Arabidopsis HR and defence responses, MIEL1 is involved in the negative regulation of these processes. The mRNA is cell-to-cell mobile.","MYB30-INTERACTING E3 LIGASE 1 (MIEL1)","MYB30-INTERACTING E3 LIGASE 1 (MIEL1)"]
["AT2G40260","cyan","Transcription factor involved in wax biosynthesis; together with MYS1 acts upstream of the DEWAX-SPL9 module, thus regulating CER1 expression; regulates the diurnal expression pattern of DEWAX.","MYB-SHAQKYF 1 (MYS2)","MYB-SHAQKYF 1 (MYS2)"]
["AT1G31190","cyan","Encodes a myo-inositol monophosphatase IMPL1 (myo-Inositol monophosphatase like 1).","MYO-INOSITOL MONOPHOSPHATASE LIKE 1 (IMPL1)","MYO-INOSITOL MONOPHOSPHATASE LIKE 1 (IMPL1)"]
["AT4G39120","cyan","Encodes a chloroplast-localized member of the myo-inositol monophosphatase family, IMPL2 (myo-Inositol monophosphatase like 2) that seems to have multiple enzymatic activities. It contributes to histidine biosynthesis based on it histidinol-phosphate phosphatase activity. In addition, the protein can act as an inositol monophosphatase and an L-galactose-1-phosphate phosphatase in vitro.","MYO-INOSITOL MONOPHOSPHATASE LIKE 2 (IMPL2)","MYO-INOSITOL MONOPHOSPHATASE LIKE 2 (IMPL2);HISTIDINE BIOSYNTHESIS 7 (HISN7)"]
["AT2G19800","cyan","Encodes a myo-inositol oxygenase family gene.","MYO-INOSITOL OXYGENASE 2 (MIOX2)","MYO-INOSITOL OXYGENASE 2 (MIOX2)"]
["AT1G52040","cyan","Encodes myrosinase-binding protein expressed in flowers.","MYROSINASE-BINDING PROTEIN 1 (MBP1)","MYROSINASE-BINDING PROTEIN 1 (MBP1); (ATMBP)"]
["AT3G16400","cyan","Encodes a nitrile-specifier protein NSP1 responsible for constitutive and herbivore-induced simple nitrile formation in rosette leaves. NSP1 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation. The mRNA is cell-to-cell mobile.","NITRILE SPECIFIER PROTEIN 1 (NSP1)","MYROSINASE-BINDING PROTEIN-LIKE PROTEIN-470 (ATMLP-470);NITRILE SPECIFIER PROTEIN 1 (NSP1);NITRILE SPECIFIER PROTEIN 1 (ATNSP1)"]
["AT4G21490","cyan","NAD(P)H dehydrogenase B3;(source:Araport11)","NAD(P)H DEHYDROGENASE B3 (NDB3)","NAD(P)H DEHYDROGENASE B3 (NDB3)"]
["AT4G00570","cyan","Encodes an NAD-dependent malic enzyme (NAD-ME) that does not act on oxaloacetate, indicating that it belongs to EC 1.1.1.39. It is a member of the beta family of NAD-MEs in plants. It appears to function as a homodimer or as a heterodimer with the alpha-type NAD-ME2 (At2g13560). NAD-ME2 transcript and protein levels are higher during the night than during the day.","NAD-DEPENDENT MALIC ENZYME 2 (NAD-ME2)","NAD-DEPENDENT MALIC ENZYME 2 (NAD-ME2)"]
["AT1G74880","cyan","Encodes subunit NDH-O of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly.","NADH DEHYDROGENASE-LIKE COMPLEX ) (NdhO)","NADH DEHYDROGENASE-LIKE COMPLEX ) (NdhO);NAD(P)H:PLASTOQUINONE DEHYDROGENASE COMPLEX SUBUNIT O (NDH-O)"]
["AT1G70760","cyan","a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located on the thylakoid membrane. Mutant has impaired NAD(P)H dehydrogenase activity. The mRNA is cell-to-cell mobile.","NADH DEHYDROGENASE-LIKE COMPLEX L (NdhL)","NADH DEHYDROGENASE-LIKE COMPLEX L (NdhL);CHLORORESPIRATORY REDUCTION 23 (CRR23)"]
["AT4G37925","cyan","Encodes subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly.","NADH DEHYDROGENASE-LIKE COMPLEX M (NdhM)","NADH DEHYDROGENASE-LIKE COMPLEX M (NdhM);SUBUNIT NDH-M OF NAD(P)H:PLASTOQUINONE DEHYDROGENASE COMPLEX (NDH-M)"]
["AT5G58260","cyan","Encodes subunit NDH-N of NAD(P)H:plastoquinone dehydrogenase complex (Ndh complex) present in the thylakoid membrane of chloroplasts. This subunit is thought to be required for Ndh complex assembly.","NADH DEHYDROGENASE-LIKE COMPLEX N (NdhN)","NADH DEHYDROGENASE-LIKE COMPLEX N (NdhN)"]
["AT2G17420","cyan","NADPH-dependent thioredoxin reductase, major cytosolic isoform The mRNA is cell-to-cell mobile.","NADPH-DEPENDENT THIOREDOXIN REDUCTASE A (NTRA)","NADPH-DEPENDENT THIOREDOXIN REDUCTASE A (NTRA);NADPH-DEPENDENT THIOREDOXIN REDUCTASE 2 (NTR2);THIOREDOXIN REDUCTASE A (ATNTRA)"]
["AT1G15980","cyan","encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP.","PHOTOSYNTHETIC NDH SUBCOMPLEX B 1 (PnsB1)","NDH-DEPENDENT CYCLIC ELECTRON FLOW 1 (NDF1);PHOTOSYNTHETIC NDH SUBCOMPLEX B 1 (PnsB1);NAD(P)H DEHYDROGENASE SUBUNIT 48 (NDH48)"]
["AT1G64770","cyan","encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP.","PHOTOSYNTHETIC NDH SUBCOMPLEX B 2 (PnsB2)","NDH-DEPENDENT CYCLIC ELECTRON FLOW 1 (NDF2);NAD(P)H DEHYDROGENASE SUBUNIT 45 (NDH45);PHOTOSYNTHETIC NDH SUBCOMPLEX B 2 (PnsB2)"]
["AT3G16250","cyan","encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP. Contains a 4Fe-4S cluster.","PHOTOSYNTHETIC NDH SUBCOMPLEX B 3 (PnsB3)","NDH-DEPENDENT CYCLIC ELECTRON FLOW 1 (NDF4);PHOTOSYNTHETIC NDH SUBCOMPLEX B 3 (PnsB3)"]
["AT1G55370","cyan","NDH-dependent cyclic electron flow 5;(source:Araport11)","NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 (NDF5)","NDH-DEPENDENT CYCLIC ELECTRON FLOW 5 (NDF5)"]
["AT1G03080","cyan","kinase interacting (KIP1-like) family protein;(source:Araport11)","NETWORKED 1D (NET1D)","NETWORKED 1D (NET1D)"]
["AT2G30500","cyan","Kinase interacting (KIP1-like) family protein;(source:Araport11)","NETWORKED 4B (NET4B)","NETWORKED 4B (NET4B)"]
["AT2G38010","cyan","Apoplastic ceramidase which cleaves Phytophthora infestans?ceramide D (Pi-Cer D) from the plant pathogenic oomycete P. infestans. the resulting 9-methyl?branched sphingoid base is recognized by a plasma membrane lectin receptor?like kinase, RESISTANT TO DFPM-INHIBITION OF ABSCISIC ACID SIGNALING 2 (RDA2). The resulting 9-Methyl?branched sphingoid base is specific to microbes and induces plant immune responses by physically interacting with RDA2.","NEUTRAL CERAMIDASE 2 (ATNCER2)","NEUTRAL CERAMIDASE 2 (ATNCER2)"]
["AT1G37130","cyan","Identified as a mutant resistant to chlorate. Encodes nitrate reductase structural gene. Involved in nitrate assimilation. Has nitrate reductase activity. Up-regulated by the fungus P. indica. Binds transcription factor At2g35940. The mRNA is cell-to-cell mobile.","NITRATE REDUCTASE 2 (NIA2)","NITRATE REDUCTASE 2 (NIA2); (B29); (NIA2-1);CHLORATE RESISTANT 3 (CHL3);NITRATE REDUCTASE (NR);NITRATE REDUCTASE 2 (NR2);ARABIDOPSIS NITRATE REDUCTASE 2 (ATNR2)"]
["AT2G27450","cyan","Encodes N-carbamoylputrescine amidohydrolase that is involved in putrescine and polyamine biosynthesis.","NITRILASE-LIKE PROTEIN 1 (NLP1)","NITRILASE-LIKE PROTEIN 1 (NLP1); (ATNLP1); (CPA)"]
["AT2G19620","cyan","Plays a role in dehydration stress response.","N-MYC DOWNREGULATED-LIKE 3 (NDL3)","N-MYC DOWNREGULATED-LIKE 3 (NDL3)"]
["AT4G10380","cyan","Boric acid channel. Essential for efficient boron uptake and plant development under boron limitation. Also functions in arsenite transport and tolerance. Localized preferentially in outer membrane domains of root cells.","NOD26-LIKE INTRINSIC PROTEIN 5;1 (NIP5;1)","NOD26-LIKE MIP 8 (NLM8); (AtNIP5;1);NOD26-LIKE INTRINSIC PROTEIN 5;1 (NIP5;1);NOD26-LIKE MIP 6 (NLM6)"]
["AT5G64330","cyan","Involved in blue light response signaling pathway; interacts with the blue light photoreceptor NPH1. Null mutations abolish phototrophic responses of etiolated seedlings to low fluence blue light. Protein contains multiple protein-protein interaction domains.","NON-PHOTOTROPIC HYPOCOTYL 3 (NPH3)","NON-PHOTOTROPIC HYPOCOTYL 3 (NPH3); (JK218);ROOT PHOTOTROPISM 3 (RPT3)"]
["AT2G35190","cyan","plant-specific SNARE located in cell plate of dividing cells. cofractionates with the cytokinesis-specific syntaxin, KNOLLE, which is required for the formation of the cell plate.","NOVEL PLANT SNARE 11 (NPSN11)","NOVEL PLANT SNARE 11 (NPSN11); (ATNPSN11); (NSPN11)"]
["AT5G11340","cyan","Encodes an N-terminal acetyltransferase involved in plant development and the suppression of stress responses, potentially through the regulation of ER stress.","N-TERMINAL ACETYLTRANSFERASE 50 (NAA50)","N-TERMINAL ACETYLTRANSFERASE 50 (NAA50)"]
["AT1G54030","cyan","Encodes a vacuolar protein. Mutation causes organizational defects in the endoplasmic reticulum and aberrant protein trafficking in the plant secretory pathway. The mRNA is cell-to-cell mobile.","MODIFIED VACUOLE PHENOTYPE 1 (MVP1)","NUCLEAR CAGE (NUC);MODIFIED VACUOLE PHENOTYPE 1 (MVP1);GOLGI DEFECTS 36 (GOLD36);ENDOPLASMIC RETICULUM MORPHOLOGY 3 (ERMO3)"]
["AT1G02560","cyan","One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). The mRNA is cell-to-cell mobile.","NUCLEAR ENCODED CLP PROTEASE 5 (CLPP5)","NUCLEAR ENCODED CLP PROTEASE 5 (CLPP5);NUCLEAR-ENCODED CLPP 1 (NCLPP1);NUCLEAR CLPP 5 (NCLPP5)"]
["AT4G14540","cyan","Component of Nuclear factor Y transcription factor.","NUCLEAR FACTOR Y, SUBUNIT B3 (NF-YB3)","NUCLEAR FACTOR Y, SUBUNIT B3 (NF-YB3)"]
["AT1G19520","cyan","Ribosomal pentatricopeptide repeat protein","NUCLEAR FUSION DEFECTIVE 5 (NFD5)","NUCLEAR FUSION DEFECTIVE 5 (NFD5);RIBOSOMAL PENTATRICOPEPTIDE REPEAT PROTEIN 2 (RPPR2);RIBOSOMAL PROTEIN MS77 (MS77)"]
["AT1G27310","cyan","Encodes an ortholog of yeast NTF2, a nuclear envelop transport protein that functions as the nuclear import receptor for RanGDP, an essential player in nucleocytoplasmic transport.","NUCLEAR TRANSPORT FACTOR 2A (NTF2A)","NUCLEAR TRANSPORT FACTOR 2A (NTF2A)"]
["AT5G45390","cyan","One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001). The mRNA is cell-to-cell mobile.","CLP PROTEASE P4 (CLPP4)","NUCLEAR-ENCODED CLP PROTEASE P4 (NCLPP4);CLP PROTEASE P4 (CLPP4)"]
["AT5G63310","cyan","Maintains intracellular dNTP levels except ATP. Plays a role in response to oxidative stress and UV. Involved in phytochrome-mediated light signaling. Participates in auxin-regulated processes, partly through the modulation of auxin transport. H-bonding with His-197 inside the nucleotide-binding pocket is critical for NDPK2 functioning.","NUCLEOSIDE DIPHOSPHATE KINASE 2 (NDPK2)","NUCLEOSIDE DIPHOSPHATE KINASE 2 (NDPK2); (NDPK IA IA);NDP KINASE 1A (NDPK1A);ARABIDOPSIS NUCLEOSIDE DIPHOSPHATE KINASE 2 (ATNDPK2);NUCLEOSIDE DIPHOSPHATE KINASE IA (NDPK IA)"]
["AT4G11010","cyan","nucleoside diphosphate kinase 3 (ndpk3), located to the inter-membrane space in mitochondria","NUCLEOSIDE DIPHOSPHATE KINASE 3 (NDPK3)","NUCLEOSIDE DIPHOSPHATE KINASE 3 (NDPK3)"]
["AT1G63000","cyan","nucleotide-rhamnose synthase/epimerase-reductase;(source:Araport11)","NUCLEOTIDE-RHAMNOSE SYNTHASE/EPIMERASE-REDUCTASE (NRS/ER)","NUCLEOTIDE-RHAMNOSE SYNTHASE/EPIMERASE-REDUCTASE (NRS/ER);UDP-4-KETO-6-DEOXY-D-GLUCOSE-3,5-EPIMERASE-4-REDUCTASE 1 (UER1)"]
["AT5G19460","cyan","nudix hydrolase homolog 20;(source:Araport11)","NUDIX HYDROLASE HOMOLOG 20 (NUDT20)","NUDIX HYDROLASE HOMOLOG 20 (NUDT20);NUDIX HYDROLASE HOMOLOG 20 (atnudt20)"]
["AT1G66260","cyan","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)","(ALY3)","NVOLVED IN RRNA PROCESSING 8 (IRP8); (ALY3)"]
["AT3G59760","cyan","Arabidopsis thaliana O-acetylserine (thiol) lyase (OAS-TL) isoform oasC. Required for pollen tube growth and/or fertilization.","O-ACETYLSERINE (THIOL) LYASE ISOFORM C (OASC)","O-ACETYLSERINE (THIOL) LYASE ISOFORM C (OASC);ARABIDOPSIS THALIANA CYSTEINSYNTHASE-C (ATCS-C)"]
["AT5G39740","cyan","Encodes a ribosomal protein RPL5B that is involved in ribosome biogenesis and plays a role in organ size control by promoting cell proliferation and preventing compensation in normal leaf development.","RIBOSOMAL PROTEIN L5 B (RPL5B)","OLIGOCELLULA 7 (OLI7);RIBOSOMAL PROTEIN UL18Y (UL18Y);RIBOSOMAL PROTEIN L5 B (RPL5B)"]
["AT1G51560","cyan","Pyridoxamine 5-phosphate oxidase family protein;(source:Araport11)","ONEIRIC2 (ONE2)","ONEIRIC2 (ONE2)"]
["AT4G33950","cyan","Encodes calcium-independent ABA-activated protein kinase, a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Mutations disrupted ABA induction of stomatal closure as well as ABA inhibition of light-induced stomatal opening. However, regulation of stomatal opening/closing by light or CO(2) is not affected in these mutants. May act in the interval between ABA perception and reactive oxygen species production in the ABA signalling network.","OPEN STOMATA 1 (OST1)","OPEN STOMATA 1 (OST1);SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-6 (SNRK2-6); (SRK2E);SNF1-RELATED PROTEIN KINASE 2.6 (SNRK2.6); (P44);OPEN STOMATA 1 (ATOST1)"]
["AT1G73530","cyan","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)","ORGANELLE RNA RECOGNITION MOTIF PROTEIN 6 (ORRM6)","ORGANELLE RNA RECOGNITION MOTIF PROTEIN 6 (ORRM6)"]
["AT3G57430","cyan","Encodes a chloroplast RNA editing factor.","ORGANELLE TRANSCRIPT PROCESSING 84 (OTP84)","ORGANELLE TRANSCRIPT PROCESSING 84 (OTP84)"]
["AT5G16690","cyan","Origin Recognition Complex subunit 3. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b.","ORIGIN RECOGNITION COMPLEX SUBUNIT 3 (ORC3)","ORIGIN RECOGNITION COMPLEX SUBUNIT 3 (ORC3); (ATORC3)"]
["AT2G01120","cyan","Origin Recognition Complex subunit 4. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b.","ORIGIN RECOGNITION COMPLEX SUBUNIT 4 (ORC4)","ORIGIN RECOGNITION COMPLEX SUBUNIT 4 (ORC4)"]
["AT5G39550","cyan","Encodes the VIM3/ORTH1 protein that is similar to VIM1. This protein has an N-terminal PHD domain and two RING domains surrounding an SRA domain. The protein has been shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the former. This protein functions as an E3 ubiquitin ligase in vitro with members of the UBC8 family E2s. Either of the two RING domains present in the protein can promote ubiquitylation in vitro, but, not the PHD domain. Over-expression of ORTH1/VIM3 leads to decreased levels of FWA methylation, increased levels of FWA transcripts, and delayed flowering. Cen180 repeats are also hypomethylated in plants overexpressing this protein.","VARIANT IN METHYLATION 3 (VIM3)","ORTHRUS 1 (ORTH1);VARIANT IN METHYLATION 3 (VIM3)"]
["AT1G28120","cyan","Deubiquitinase with preference towards M1 and K48 linkages.","OTU DOMAIN CONTAINING DUB 1 (OTU1)","OTU DOMAIN CONTAINING DUB 1 (OTU1)"]
["AT1G16000","cyan","Member of the Arabidopsis 7-kDa OEP family. Tail-anchored (TA) membrane protein which possesses a single C-terminal transmembrane domain targeting post-translationally to plastids.","OUTER ENVELOPE PROTEIN 9.1 (OEP9.1)","OUTER ENVELOPE PROTEIN 9.1 (OEP9.1)"]
["AT2G38025","cyan","Cysteine proteinases superfamily protein;(source:Araport11)","OVARIAN TUMOR DOMAIN (OTU)-CONTAINING DUB (DEUBIQUITILATING ENZYME) 3 (OTU3)","OVARIAN TUMOR DOMAIN (OTU)-CONTAINING DUB (DEUBIQUITILATING ENZYME) 3 (OTU3)"]
["AT2G25840","cyan","Nucleotidylyl transferase superfamily protein;(source:Araport11)","OVULE ABORTION 4 (OVA4)","OVULE ABORTION 4 (OVA4)"]
["AT3G13490","cyan","Encodes a dual targeted lysyl-tRNA ligase that is found both in the mitochondrion and the chloroplast. Plants mutated in this gene exhibit an ovule abortion phenotype.","OVULE ABORTION 5 (OVA5)","OVULE ABORTION 5 (OVA5);ARABIDOPSIS THALIANA LYSYL-TRNA SYNTHETASE 2 (ATKRS-2)"]
["AT4G29190","cyan","Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11)","OXIDATION-RELATED ZINC FINGER 2 (OZF2)","OXIDATION-RELATED ZINC FINGER 2 (OZF2);ARABIDOPSIS THALIANA OXIDATION-RELATED ZINC FINGER 2 (ATOZF2); (ATC3H49); (ATTZF3);TANDEM ZINC FINGER 3 (TZF3)"]
["AT2G07180","cyan","Protein kinase superfamily protein;(source:Araport11)","PBS1-LIKE 17 (PBL17)","PBS1-LIKE 17 (PBL17)"]
["AT3G54960","cyan","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response.","PDI-LIKE 1-3 (PDIL1-3)","PDI-LIKE 1-3 (ATPDIL1-3);PROTEIN DISULFIDE ISOMERASE 1 (PDI1);ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 1 (ATPDI1);PDI-LIKE 1-3 (PDIL1-3)"]
["AT1G11580","cyan","Pectin methylesterase involved in root growth, plant-pathogen interactions.","PECTIN METHYL ESTERASE INHIBITOR-PECTIN METHYLESTERASE 18 (PMEI-PME18)","PECTIN METHYL ESTERASE INHIBITOR-PECTIN METHYLESTERASE 18 (PMEI-PME18)"]
["AT3G10720","cyan","Pectin methylesterase inhibitor; INVI-PMEI protein isoform which clustered with a PME.","PECTIN METHYL ESTERASE INHIBITOR-PECTIN METHYLESTERASE 25 (PMEI-PME25)","PECTIN METHYL ESTERASE INHIBITOR-PECTIN METHYLESTERASE 25 (PMEI-PME25)"]
["AT3G14310","cyan","encodes a pectin methylesterase, targeted by a cellulose binding protein (CBP) from the parasitic nematode Heterodera schachtii during parasitism.","PECTIN METHYLESTERASE 3 (PME3)","PECTIN METHYLESTERASE 3 (ATPME3);PECTIN METHYLESTERASE 3 (PME3);OVERLY ZINC SENSITIVE 2 (OZS2)"]
["AT4G25260","cyan","Pectin methylesterase inhibitor. Forms pH dependent complex with PME3.","PECTIN METHYLESTERASE INIHIBITOR 7 (PMEI7)","PECTIN METHYLESTERASE INIHIBITOR 7 (PMEI7)"]
["AT2G44490","cyan","Encodes a glycosyl hydrolase that localizes to peroxisomes and acts as a component of an inducible preinvasion resistance mechanism. Required for mlo resistance. The mRNA is cell-to-cell mobile.","PENETRATION 2 (PEN2)","PENETRATION 2 (PEN2);BETA GLUCOSIDASE 26 (BGLU26)"]
["AT5G22130","cyan","member of Glycosyltransferase Family- 50","PEANUT 1 (PNT1)","PENTA 1 (PNT1);PEANUT 1 (PNT1)"]
["AT4G32900","cyan","Responsible for the critical processes of gravity resistance, supporting plant growth under different gravity conditions.","PEPTIDYL-TRNA HYDROLASE II (PTH2)","PEPTIDYL-TRNA HYDROLASE II (PTH2)"]
["AT3G32980","cyan","N-glycosylation client involved in salt stress response.","PEROXIDASE 32 (PRX32)","PEROXIDASE 32 (PRX32)"]
["AT2G45740","cyan","member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation. The mRNA is cell-to-cell mobile.","PEROXIN 11D (PEX11D)","PEROXIN 11D (PEX11D)"]
["AT3G18160","cyan","Peroxin 3-1;(source:Araport11)","PEROXIN 3-1 (PEX3-1)","PEROXIN 3-1 (PEX3-1)"]
["AT2G39970","cyan","Encodes peroxisomal membrane protein 38 (PMP38). Mutation in this protein results in enlargement of peroxisomes. Delivers NAD+ for optimal fatty acid degradation during storage oil mobilization.","PEROXISOMAL NAD CARRIER (PXN)","PEROXISOMAL NAD CARRIER (PXN);PEROXISOMAL MEMBRANE PROTEIN 38 (PMP38);ABERRANT PEROXISOME MORPHOLOGY 3 (APEM3)"]
["AT5G09660","cyan","encodes a microbody NAD-dependent malate dehydrogenase encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.","PEROXISOMAL NAD-MALATE DEHYDROGENASE 2 (PMDH2)","PEROXISOMAL NAD-MALATE DEHYDROGENASE 2 (PMDH2)"]
["AT1G64370","cyan","Encodes an intrinsically disordered plant protein that appears in condensates in the cytosol, in nuclei and nucleoli, binds RNA and can act as an RNA chaperone.","PHLOEM ASSOCIATED RNA CHAPERONE-LIKE (PARCL)","PHLOEM ASSOCIATED RNA CHAPERONE-LIKE (PARCL); (ATPARCL)"]
["AT4G19840","cyan","encodes a phloem lectin, similar to phloem lectin in cucumber and celery. Gene is expressed in the phloem, predominantly in the companion cells. The mRNA is cell-to-cell mobile.","PHLOEM PROTEIN 2-A1 (PP2-A1)","PHLOEM PROTEIN 2-A1 (ATPP2-A1);PHLOEM PROTEIN 2-A1 (ATPP2A-1);ARATHNICTABA 5 (AN5);PHLOEM PROTEIN 2-A1 (PP2-A1)"]
["AT5G26570","cyan","chloroplastidic phosphoglucan, water dikinase (PWD) which is required for normal degradation of leaf starch in Arabidopsis. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C3 position.","PHOSPHOGLUCAN WATER DIKINASE (PWD)","PHOSPHOGLUCAN WATER DIKINASE (PWD); (ATGWD3); (OK1)"]
["AT1G06800","cyan","Encodes a lipase that hydrolyzes phosphatidylcholine, glycolipids as well as triacylglycerols.","PHOSPHOLIPASE A I GAMMA 1 (PLA-I{gamma}1)","PHOSPHOLIPASE A I GAMMA 1 (PLA-I{gamma}1);DAD1-LIKE LIPASE 4 (DALL4)"]
["AT5G58670","cyan","phosphatidylinositol-specific phospholipase C is induced to a significant extent under various environmental stresses, such as dehydration, salinity, and low temperature. May play a role in secondary ABA response. There are two genes called ATPLC1, one corresponding to AT4g38530 and one corresponding ot AT5g58670 (this one).","PHOSPHOLIPASE C1 (PLC1)","PHOSPHOLIPASE C1 (PLC1);ARABIDOPSIS THALIANA PHOSPHOLIPASE C (ATPLC);PHOSPHOLIPASE C 1 (PLC1);PHOSPHOLIPASE C1 (ATPLC1)"]
["AT2G45790","cyan","Encodes a cytoplasmic phosphomannomutase, involved in ascorbate biosynthesis","PHOSPHOMANNOMUTASE (PMM)","PHOSPHOMANNOMUTASE (ATPMM);PHOSPHOMANNOMUTASE (PMM)"]
["AT2G42910","cyan","Phosphoribosyltransferase family protein;(source:Araport11)","PHOSPHORIBOSYL DIPHOSPHATE SYNTHASE 4 (PRS4)","PHOSPHORIBOSYL DIPHOSPHATE SYNTHASE 4 (PRS4); (ATPRS4)"]
["AT1G10700","cyan","Encodes a P-independent phosphoribosyl pyrophosphate (PRPP) synthase.","PHOSPHORIBOSYL PYROPHOSPHATE (PRPP) SYNTHASE 3 (PRS3)","PHOSPHORIBOSYL PYROPHOSPHATE (PRPP) SYNTHASE 3 (PRS3)"]
["AT1G07780","cyan","Encodes phosphoribosylanthranilate isomerase which catalyzes the third step of the tryptophan biosynthetic pathway. Member of gene family. The mRNA is cell-to-cell mobile.","PHOSPHORIBOSYLANTHRANILATE ISOMERASE 1 (PAI1)","PHOSPHORIBOSYLANTHRANILATE ISOMERASE 1 (PAI1);TRANSIENT RECEPTOR POTENTIAL 6 (TRP6)"]
["AT5G17990","cyan","Encodes the tryptophan biosynthetic enzyme phosphoribosylanthranilate transferase (PAT1, called trpD in bacteria). Converts anthranilate and phosphoribosylpyrophosphate into phosphoribosylanthranilate and inorganic pyrophosphate. The mRNA is cell-to-cell mobile.","TRYPTOPHAN BIOSYNTHESIS 1 (TRP1)","PHOSPHORIBOSYLANTHRANILATE TRANSFERASE 1 (pat1);TRYPTOPHAN BIOSYNTHESIS 1 (TRP1)"]
["AT2G17630","cyan","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11)","PHOSPHOSERINE AMINOTRANSFERASE 2 (PSAT2)","PHOSPHOSERINE AMINOTRANSFERASE 2 (PSAT2)"]
["AT2G47590","cyan","photolyase/blue light photoreceptor PHR2 (PHR2) mRNA,","PHOTOLYASE/BLUE-LIGHT RECEPTOR 2 (PHR2)","PHOTOLYASE/BLUE-LIGHT RECEPTOR 2 (PHR2)"]
["AT1G19150","cyan","PSI type II chlorophyll a/b-binding protein (Lhca2*1) mRNA, The mRNA is cell-to-cell mobile.","PHOTOSYSTEM I LIGHT HARVESTING COMPLEX GENE 6 (LHCA6)","PHOTOSYSTEM I LIGHT HARVESTING COMPLEX GENE 6 (LHCA6); (LHCA2*1)"]
["AT2G46820","cyan","Encodes the P subunit of Photosystem I. About 25% of the TMP14 pool appeared to be phosphorylated, and this ratio is not affected by light. Contains seven phosphorylation sites on threonine residue and chloroplast targeting signal. Located in the proximity of PSI-L, -H and -O subunits. Forms oligomers with other members of CURT1 family to modulate grana structure.","PHOTOSYSTEM I P SUBUNIT (PSI-P)","PHOTOSYSTEM I P SUBUNIT (PSI-P); (PSAP);THYLAKOID MEMBRANE PHOSPHOPROTEIN OF 14 KDA (TMP14);PLASTID TRANSCRIPTIONALLY ACTIVE 8 (PTAC8);CURVATURE THYLAKOID 1B (CURT1B)"]
["AT3G50820","cyan","Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In <i>Arabidopsis thaliana</i> the PsbO proteins are encoded by two genes: <i>psbO1</i> and <i>psbO2</i>. PsbO2 is the minor isoform in the wild-type. Mutants defective in this gene have been shown to be affected in the dephosphorylation of the D1 protein of PSII.","PHOTOSYSTEM II SUBUNIT O-2 (PSBO2)","PHOTOSYSTEM II SUBUNIT O-2 (PSBO2);PHOTOSYSTEM II SUBUNIT O-2 (PSBO-2);OXYGEN EVOLVING COMPLEX SUBUNIT 33 KDA (OEC33)"]
["AT4G21280","cyan","Encodes the PsbQ subunit of the oxygen evolving complex of photosystem II.","PHOTOSYSTEM II SUBUNIT QA (PSBQA)","PHOTOSYSTEM II SUBUNIT Q (PSBQ);PHOTOSYSTEM II SUBUNIT QA (PSBQA);PHOTOSYSTEM II SUBUNIT Q-1 (PSBQ-1)"]
["AT5G58140","cyan","Membrane-bound protein serine/threonine kinase that functions as blue light photoreceptor in redundancy with PHO1. Involved in stomatal opening, chloroplast movement and phototropism. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT2 possesses two LOV (LOV1 and LOV2, for light-oxygen-voltage-sensing) domains involved in FMN-binding and a C-terminus forming a serine/threonine kinase domain. LOV2 acts as an inhibitor of phototropin kinase in the dark, and light cancels the inhibition through cysteine-FMN adduct formation. LOV1 in contrast acts as an attenuator of photoactivation. Localized to the Golgi apparatus under the induction of blue light. The mRNA is cell-to-cell mobile.","PHOTOTROPIN 2 (PHOT2)","PHOTOTROPIN 2 (PHOT2); (ATPHOT2);NON PHOTOTROPIC HYPOCOTYL 1-LIKE (NPL1)"]
["AT1G68890","cyan","Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis. The mRNA is cell-to-cell mobile.","PHYLLO (PHYLLO)","PHYLLO (PHYLLO)"]
["AT3G16500","cyan","phytochrome-associated protein 1 (PAP1)","PHYTOCHROME-ASSOCIATED PROTEIN 1 (PAP1)","PHYTOCHROME-ASSOCIATED PROTEIN 1 (PAP1);INDOLE-3-ACETIC ACID INDUCIBLE 26 (IAA26)"]
["AT2G27530","cyan","Encodes ribosomal protein L10aP. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.","PIGGYBACK1 (PGY1)","PIGGYBACK1 (PGY1);RIBOSOMAL PROTEIN UL1Y (UL1Y)"]
["AT1G66520","cyan","formyltransferase;(source:Araport11)","PIGMENT DEFECTIVE 194 (pde194)","PIGMENT DEFECTIVE 194 (pde194)"]
["AT1G70940","cyan","A regulator of auxin efflux and involved in differential growth. PIN3 is expressed in gravity-sensing tissues, with PIN3 protein accumulating predominantly at the lateral cell surface. PIN3 localizes to the plasma membrane and to vesicles. In roots, PIN3 is expressed without pronounced polarity in tiers two and three of the columella cells, at the basal side of vascular cells, and to the lateral side of pericycle cells of the elongation zone. PIN3 overexpression inhibits root cell growth. Protein phosphorylation plays a role in regulating PIN3 trafficking to the plasma membrane. The mRNA is cell-to-cell mobile.","PIN-FORMED 3 (PIN3)","PIN-FORMED 3 (PIN3);ARABIDOPSIS PIN-FORMED 3 (ATPIN3)"]
["AT1G23080","cyan","Encodes a novel component of auxin efflux that is located apically in the basal cell and is involved during embryogenesis in setting up the apical-basal axis in the embryo. It is also involved in pattern specification during root development. In roots, it is expressed at lateral and basal membranes of provascular cells in the meristem and elongation zone, whereas in the columella cells it coincides with the PIN3 domain. Plasma membrane-localized PIN proteins mediate a saturable efflux of auxin. PINs mediate auxin efflux from mammalian and yeast cells without needing additional plant-specific factors. The action of PINs in auxin efflux is distinct from PGPs, rate-limiting, specific to auxins and sensitive to auxin transport inhibitors. PINs are directly involved of in catalyzing cellular auxin efflux.","PIN-FORMED 7 (PIN7)","PIN-FORMED 7 (PIN7);ARABIDOPSIS PIN-FORMED 7 (ATPIN7)"]
["AT4G13660","cyan","Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows preference for pinoresinol and not lariciresinol. The mRNA is cell-to-cell mobile.","PINORESINOL REDUCTASE 2 (PRR2)","PINORESINOL REDUCTASE 2 (PRR2); (ATPRR2);PSEUDO-RESPONSE REGULATOR 2 (PRR2)"]
["AT1G71020","cyan","Encodes a nuclear localized plant U-Box protein that interacts with MYC2 and regulates its stability by acting as an E3 ubiquitin ligase and polyubiquitinating MYC2. By this mechanism, it targets MYC2 for destruction thereby affecting JA signaling.","PLANT U-BOX PROTEIN10 (PUB10)","PLANT U-BOX PROTEIN10 (PUB10)"]
["AT4G22150","cyan","Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX3)","PLANT UBX DOMAIN-CONTAINING PROTEIN 3 (PUX3)","PLANT UBX DOMAIN-CONTAINING PROTEIN 3 (PUX3); (PUX3)"]
["AT1G67690","cyan","Zincin-like metalloproteases family protein;(source:Araport11)","PLANT-SPECIFIC PROTEIN OF M3 FAMILY (PSPM3)","PLANT-SPECIFIC PROTEIN OF M3 FAMILY (PSPM3)"]
["AT3G61430","cyan","a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development. The mRNA is cell-to-cell mobile.","PLASMA MEMBRANE INTRINSIC PROTEIN 1A (PIP1A)","PLASMA MEMBRANE INTRINSIC PROTEIN 1A (PIP1A);ARABIDOPSIS THALIANA PLASMA MEMBRANE INTRINSIC PROTEIN 1 (ATPIP1);PLASMA MEMBRANE INTRINSIC PROTEIN 1 (PIP1);PLASMA MEMBRANE INTRINSIC PROTEIN 1;1 (PIP1;1)"]
["AT3G53420","cyan","a member of the plasma membrane intrinsic protein subfamily PIP2. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed specifically in the vascular bundles and protein level increases slightly during leaf dev. When expressed in yeast cells can conduct hydrogen peroxide into those cells.","PLASMA MEMBRANE INTRINSIC PROTEIN 2A (PIP2A)","PLASMA MEMBRANE INTRINSIC PROTEIN 2;1 (PIP2;1);PLASMA MEMBRANE INTRINSIC PROTEIN 2 (PIP2);PLASMA MEMBRANE INTRINSIC PROTEIN 2A (PIP2A); (ATPIP2;1)"]
["AT5G02940","cyan","Chloroplast envelope ion channel protein, forms oligomers with PEC2 with regulator of K+ conductance domains protruding into the intermembrane space.","PLASTID ENVELOPE ION CHANNELS 1 (PEC1)","PLASTID ENVELOPE ION CHANNELS 1 (PEC1)"]
["AT1G32990","cyan","mutant has Decreased effective quantum yield of photosystem II; Pale green plants; Reduced growth rate; Plastid Ribosomal Protein L11 The mRNA is cell-to-cell mobile.","PLASTID RIBOSOMAL PROTEIN L11 (PRPL11)","PLASTID RIBOSOMAL PROTEIN L11 (PRPL11);RIBOSOMAL PROTEIN UL11C (UL11C)"]
["AT5G54600","cyan","Translation protein SH3-like family protein;(source:Araport11)","PLASTID RIBOSOMAL PROTEIN L24 (RPL24)","PLASTID RIBOSOMAL PROTEIN L24 (RPL24);RIBOSOMAL PROTEIN UL24C (UL24C);SUPPRESSOR OF VARIEGATION 8 (SVR8)"]
["AT2G33450","cyan","Ribosomal L28 family;(source:Araport11)","PLASTID RIBOSOMAL PROTEIN L28 (PRPL28)","PLASTID RIBOSOMAL PROTEIN L28 (PRPL28);RIBOSOMAL PROTEIN BL28C (BL28C)"]
["AT2G24090","cyan","Ribosomal protein L35;(source:Araport11)","PLASTID RIBOSOMAL PROTEIN L35 (PRPL35)","PLASTID RIBOSOMAL PROTEIN L35 (PRPL35);RIBOSOMAL PROTEIN BL35C (BL35C)"]
["AT3G15190","cyan","chloroplast 30S ribosomal protein S20;(source:Araport11)","PLASTID RIBOSOMAL PROTEIN S20 (PRPS20)","PLASTID RIBOSOMAL PROTEIN S20 (PRPS20);RIBOSOMAL PROTEIN BS20C (BS20C)"]
["AT1G29070","cyan","Ribosomal protein L34;(source:Araport11)","PLASTID RIBOSOMAL PROTEINS OF THE 50S SUBUNIT 34 (PRPL34)","PLASTID RIBOSOMAL PROTEINS OF THE 50S SUBUNIT 34 (PRPL34);RIBOSOMAL PROTEIN BL34C (BL34C)"]
["AT4G13670","cyan","plastid transcriptionally active 5;(source:Araport11)","PLASTID TRANSCRIPTIONALLY ACTIVE 5 (PTAC5)","PLASTID TRANSCRIPTIONALLY ACTIVE 5 (PTAC5)"]
["AT5G24314","cyan","plastid transcriptionally active7;(source:Araport11)","PLASTID TRANSCRIPTIONALLY ACTIVE7 (PTAC7)","PLASTID TRANSCRIPTIONALLY ACTIVE7 (PTAC7); (TAC7);PEP-ASSOCIATED PROTEIN 12 (PAP12)"]
["AT1G68590","cyan","Ribosomal protein PSRP-3/Ycf65;(source:Araport11)","PLASTID-SPECI&#64257;C RIBOSOMAL PROTEIN 3/1 (PSRP3/1)","PLASTID-SPECI&#64257;C RIBOSOMAL PROTEIN 3/1 (PSRP3/1);RIBOSOMAL PROTEIN CS23Z (CS23Z)"]
["AT3G56910","cyan","Encodes PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5). Functions in plastid translation.","PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5 (PSRP5)","PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5 (PSRP5);RIBOSOMAL PROTEIN CL37 (CL37)"]
["AT2G38140","cyan","plastid-specific ribosomal protein 4 (PSRP4) mRNA, complete The mRNA is cell-to-cell mobile.","PLASTID-SPECIFIC RIBOSOMAL PROTEIN 4 (PSRP4)","PLASTID-SPECIFIC RIBOSOMAL PROTEIN 4 (PSRP4);RIBOSOMAL PROTEIN BTHXC (BTHXC)"]
["AT1G15210","cyan","pleiotropic drug resistance 7;(source:Araport11)","ATP-BINDING CASSETTE G35 (ABCG35)","PLEIOTROPIC DRUG RESISTANCE 7 (PDR7);PLEIOTROPIC DRUG RESISTANCE 7 (ATPDR7);ATP-BINDING CASSETTE G35 (ABCG35)"]
["AT1G22780","cyan","S18 ribosomal protein involved in the binding of f-Met tRNA during initiation of mRNA translation. Expression restricted to meristems. Mutant phenotype-pointed first leaves,reduced fresh weight, growth retardation.","POINTED FIRST LEAVES (PFL)","POINTED FIRST LEAVES (PFL);RIBOSOMAL PROTEIN US13Z (US13Z);POINTED FIRST LEAVES 1 (PFL1);40S RIBOSOMAL PROTEIN S18 (RPS18A)"]
["AT2G23350","cyan","polyadenylate-binding protein, putative / PABP, putative.Member of the Class II family of PABP proteins. Highly and ubiquitously expressed. The mRNA is cell-to-cell mobile.","POLY(A) BINDING PROTEIN 4 (PAB4)","POLY(A) BINDING PROTEIN 4 (PABP4);POLY(A) BINDING PROTEIN 4 (PAB4)"]
["AT1G49760","cyan","polyadenylate-binding protein, putative / PABP, putative, similar to poly(A)-binding protein GB:AAF66825 GI:7673359 from (Nicotiana tabacum). Highly and ubiquitously expressed. Member of the class II PABP family.","POLY(A) BINDING PROTEIN 8 (PAB8)","POLY(A) BINDING PROTEIN 8 (PABP8);POLY(A) BINDING PROTEIN 8 (PAB8)"]
["AT5G51120","cyan","Encodes a homolog of the protein PABN1, a polyadenylation factor subunit.","POLYADENYLATE-BINDING PROTEIN 1 (PABN1)","POLYADENYLATE-BINDING PROTEIN 1 (PABN1)"]
["AT1G31820","cyan","Encodes POLYAMINE UPTAKE TRANSPORTER 1, an amino acid permease family protein.","POLYAMINE UPTAKE TRANSPORTER 1 (PUT1)","POLYAMINE UPTAKE TRANSPORTER 1 (PUT1)"]
["AT1G23470","cyan","pseudogene of Pectin lyase-like superfamily protein;(source:Araport11)","POLYGALACTURONASE CLADE F 2 (PGF2)","POLYGALACTURONASE CLADE F 2 (PGF2)"]
["AT3G57790","cyan","Pectin lyase-like superfamily protein;(source:Araport11)","POLYGALACTURONASE CLADE F 8 (PGF8)","POLYGALACTURONASE CLADE F 8 (PGF8)"]
["AT5G06870","cyan","Encodes a polygalacturonase inhibiting protein involved in plant defense response. PGIPs inhibit the activity of pectin degrading enzymes such as those produced by fungal pathogens. PGIP2 is induced by fungal infection and methyl jasmonate.Suppressed in the proton sensitive stop1-mutant, but the transcription level was recovered by transformation of STOP2. Knockout mutant showed severe damage in the root tip in low Ca and low pH medium.","POLYGALACTURONASE INHIBITING PROTEIN 2 (PGIP2)","POLYGALACTURONASE INHIBITING PROTEIN 2 (PGIP2);ARABIDOPSIS POLYGALACTURONASE INHIBITING PROTEIN 2 (ATPGIP2)"]
["AT4G24370","cyan","hypothetical protein;(source:Araport11)","POSITIVE REGULATOR OF SKD1 (PROS)","POSITIVE REGULATOR OF SKD1 (PROS)"]
["AT3G22480","cyan","&#946;-type PFD member that modulates actin and tubulin patterning in roots; interacts with prefoldinRPB5 interactor (URI) to recycle PIN2 and modulate auxin distribution.","PREFOLDIN 2 (PFD2)","PREFOLDIN 2 (PFD2)"]
["AT5G56360","cyan","Encodes PSL4, beta-subunit of endoplasmic reticulum-resident glucosidase II, which is essential for stable accumulation and quality control of the elf18 receptor EFR but not the flg22 receptor FLS2. The mRNA is cell-to-cell mobile.","PRIORITY IN SWEET LIFE 4 (PSL4)","PRIORITY IN SWEET LIFE 4 (PSL4)"]
["AT5G19940","cyan","Putative fibrillin; enables plants to cope with moderate light stress and affects cadmium tolerance.","FIBRILLIN6 (FBN6)","PROBABLE PLASTID-LIPID ASSOCIATED PROTEIN (PAP8);FIBRILLIN6 (FBN6)"]
["AT2G23930","cyan","Putative small nuclear ribonucleoprotein G;(source:Araport11)","PROBABLE SMALL NUCLEAR RIBONUCLEOPROTEIN G (SNRNP-G)","PROBABLE SMALL NUCLEAR RIBONUCLEOPROTEIN G (SNRNP-G)"]
["AT1G56650","cyan","Encodes a putative MYB domain containing transcription factor involved in anthocyanin metabolism and radical scavenging. Essential for the sucrose-mediated expression of the dihydroflavonol reductase gene. Auxin and ethylene responsiveness of PAP1 transcription is lost in myb12 mutants. Interacts with JAZ proteins to regulate anthocyanin accumulation.","PRODUCTION OF ANTHOCYANIN PIGMENT 1 (PAP1)","PRODUCTION OF ANTHOCYANIN PIGMENT 1 (PAP1);PHOSPHATIDIC ACID PHOSPHATASE 1 (PAP1);MYELOBLASTOSIS PROTEIN 75 (MYB75);SUC-INDUCED ANTHOCYANIN ACCUMULATION 1 (SIAA1);MYB DOMAIN PROTEIN 75 (ATMYB75);ARABIDOPSIS THALIANA PRODUCTION OF ANTHOCYANIN PIGMENT 1 (ATPAP1); (PAP1-D)"]
["AT4G02060","cyan","Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin.","PROLIFERA (PRL)","PROLIFERA (PRL); (MCM7)"]
["AT2G29570","cyan","Functionally interacts with POLH to repair DNA damaged by UVB damage. May be sumoylated.","PROLIFERATING CELL NUCLEAR ANTIGEN 2 (PCNA2)","PROLIFERATING CELL NUCLEAR ANTIGEN 2 (PCNA2);A. THALIANA PROLIFERATING CELL NUCLEAR ANTIGEN 2 (ATPCNA2)"]
["AT1G07370","cyan","Encodes putative proliferating cell nuclear antigen involved in cell cycle regulation. May be sumoylated.","PROLIFERATING CELLULAR NUCLEAR ANTIGEN 1 (PCNA1)","PROLIFERATING CELLULAR NUCLEAR ANTIGEN 1 (PCNA1);PROLIFERATING CELLULAR NUCLEAR ANTIGEN 1 (ATPCNA1)"]
["AT3G62120","cyan","Encodes a cytosolic prolyl-tRNA synthetase.","PROLYL-TRNA SYNTHETASE CYTOSOLIC (PRORS-CYT)","PROLYL-TRNA SYNTHETASE CYTOSOLIC (PRORS-CYT); (ATPRORS-CYT)"]
["AT5G49020","cyan","Encodes a type I protein arginine methyltransferase. PRMT4a can catalyze the asymmetric dimethylation of arginines 2,17, and 26 on histone 3 and can also methylate myelin basic protein in vitro. Double mutants lacking PRMT4a and 4b have reduced levels of histone 3 methylated at R17. These double mutants flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts.","PROTEIN ARGININE METHYLTRANSFERASE 4A (PRMT4A)","PROTEIN ARGININE METHYLTRANSFERASE 4A (PRMT4A);ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 4A (ATPRMT4A)"]
["AT2G29400","cyan","Type 1 protein phosphatase, expressed in roots, rosettes and flowers","TYPE ONE PROTEIN PHOSPHATASE 1 (TOPP1)","PROTEIN PHOSPHATASE 1 (PP1-AT);TYPE ONE PROTEIN PHOSPHATASE 1 (TOPP1)"]
["AT3G58500","cyan","Encodes one of the isoforms of the catalytic subunit of protein phosphatase 2A: AT1G59830/PP2A-1, AT1G10430/PP2A-2, At2g42500/PP2A-3, At3g58500/PP2A-4 [Plant Molecular Biology (1993) 21:475-485 and (1994) 26:523-528; Note that in more recent publications, there is mixed use of gene names for PP2A-3 and PP2A-4 - some refer to At2g42500 as PP2A-3 and some as PP2A-4].","PROTEIN PHOSPHATASE 2A-4 (PP2A-4)","PROTEIN PHOSPHATASE 2A-3 (PP2A-3);PROTEIN PHOSPHATASE 2A-4 (PP2A-4); (EP7)"]
["AT5G54190","cyan","light-dependent NADPH:protochlorophyllide oxidoreductase A","PROTOCHLOROPHYLLIDE OXIDOREDUCTASE A (PORA)","PROTOCHLOROPHYLLIDE OXIDOREDUCTASE A (PORA)"]
["AT4G27440","cyan","light-dependent NADPH:protochlorophyllide oxidoreductase B The mRNA is cell-to-cell mobile.","PROTOCHLOROPHYLLIDE OXIDOREDUCTASE B (PORB)","PROTOCHLOROPHYLLIDE OXIDOREDUCTASE B (PORB)"]
["AT1G03630","cyan","Encodes for a protein with protochlorophyllide oxidoreductase activity. The enzyme is NADPH- and light-dependent.","PROTOCHLOROPHYLLIDE OXIDOREDUCTASE C (POR C)","PROTOCHLOROPHYLLIDE OXIDOREDUCTASE C (POR C); (PORC)"]
["AT3G56650","cyan","thylakoid lumenal protein (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein);(source:Araport11)","PSBP-DOMAIN PROTEIN 6 (PPD6)","PSBP-DOMAIN PROTEIN 6 (PPD6)"]
["AT4G15510","cyan","A nuclear-encoded thylakoid lumenal protein that is associated with photosystem I (PSI) but is not an integral subunit of PSI. It is an PSI assembly factor that assists the proper folding and integration of PsaB and PsaA into the thylakoid membrane. It is involved in the assembly of PSI reaction center heterodimer core.","PSBP-DOMAIN PROTEIN1 (PPD1)","PSBP-DOMAIN PROTEIN1 (PPD1)"]
["AT3G55330","cyan","Facilitates the assembly of the photosystem II supercomplexes and optimizes plant pitness under fluctuating light.","PSBP-LIKE PROTEIN 1 (PPL1)","PSBP-LIKE PROTEIN 1 (PPL1)"]
["AT2G39470","cyan","PsbP-like protein 2;(source:Araport11)","PHOTOSYNTHETIC NDH SUBCOMPLEX L 1 (PnsL1)","PSBP-LIKE PROTEIN 2 (PPL2);PHOTOSYNTHETIC NDH SUBCOMPLEX L 1 (PnsL1)"]
["AT1G14150","cyan","Encodes a subunit of the NAD(P)H dehydrogenase complex located in the chloroplast thylakoid lumen.","PHOTOSYNTHETIC NDH SUBCOMPLEX L 2 (PnsL2)","PSBQ-LIKE 1 (PQL1);PSBQ-LIKE 2 (PQL2);PHOTOSYNTHETIC NDH SUBCOMPLEX L 2 (PnsL2)"]
["AT3G13175","cyan","transmembrane protein;(source:Araport11)","PSI-INTERACTING ROOT-CELL ENRICHED 1 (PRCE1)","PSI-INTERACTING ROOT-CELL ENRICHED 1 (PRCE1)"]
["AT2G47060","cyan","Encodes Pto-interacting 1-4 (PTI1-4), a member of the PTI1-like serine/threonine protein kinases that share strong sequence identity to the tomato PTI1 kinase.","PTO-INTERACTING 1-4 (PTI1-4)","PTO-INTERACTING 1-4 (PTI1-4);CYTOSOLIC ABA RECEPTOR KINASE 3 (CARK3)"]
["AT2G27190","cyan","Encodes a root-secreted purple acid phosphatase involved in extracellular phosphate-scavenging. PEP complex component.","PURPLE ACID PHOSPHATASE 12 (PAP12)","PURPLE ACID PHOSPHATASE 1 (PAP1);ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 1 (ATPAP1);PURPLE ACID PHOSPHATASE 12 (PAP12);PURPLE ACID PHOSPHATASE 12 (ATPAP12)"]
["AT3G16420","cyan","The PBP1(PYK10-binding protein 1) assists the PYK10 (beta-glucosidase complex) in its activity and may act like a molecular chaperone that facilitates the correct polymerization of PYK10, when tissues are damaged and subcellular structures are destroyed by pests. The mRNA is cell-to-cell mobile.","PYK10-BINDING PROTEIN 1 (PBP1)","PYK10-BINDING PROTEIN 1 (PBP1);JACALIN-RELATED LECTIN 30 (JAL30); (PBPI)"]
["AT3G20330","cyan","encodes aspartate carbamoyltransferase catalyzing the second step in the de novo pyrimidine ribonucleotide biosynthesis","PYRIMIDINE B (PYRB)","PYRIMIDINE B (PYRB);ASPARTATE TRANSCARBAMOYLASE (ACT)"]
["AT1G01050","cyan","Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate.","PYROPHOSPHORYLASE 1 (PPa1)","PYROPHOSPHORYLASE 1 (PPa1);PYROPHOSPHORYLASE 1 (AtPPa1)"]
["AT5G09650","cyan","Encodes a protein with inorganic pyrophosphatase activity.","PYROPHOSPHORYLASE 6 (PPa6)","PYROPHOSPHORYLASE 6 (PPa6);PYROPHOSPHORYLASE 6 (AtPPa6)"]
["AT1G15020","cyan","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the quiescin-sulfhydryl oxidase (QSOX) family, which possess an Erv1-like domain at the COOH terminus in addition to a TRX domain.","QUIESCIN-SULFHYDRYL OXIDASE 1 (QSOX1)","QUIESCIN-SULFHYDRYL OXIDASE 1 (ATQSOX1);QUIESCIN-SULFHYDRYL OXIDASE 1 (QSOX1); (QSO2)"]
["AT3G07410","cyan","RAB GTPase homolog A5B;(source:Araport11)","RAB GTPASE HOMOLOG A5B (RABA5b)","RAB GTPASE HOMOLOG A5B (AtRABA5b);RAB GTPASE HOMOLOG A5B (RABA5b)"]
["AT1G71100","cyan","Encodes a ribose 5-phosphate isomerase involved in the formation of uridine used for the synthesis of UDP-sugars. Mutants of this gene are affected in cellulose biosynthesis.","RADIAL SWELLING 10 (RSW10)","RADIAL SWELLING 10 (RSW10)"]
["AT4G22970","cyan","Encodes a separase (ESP), homologous to human and mouse separase protein. Separase is a capase family protease required for the release of sister chromatid cohesion during meiosis and mitosis. Arabidopsis separase contains a predicted 2Fe2S-ferredoxin domain that is not present in the proteins of other organisms. Also contains a putative EF-hand calcium binding domain. Mutant seeds exhibited embryo arrest at the globular stage. The endosperm also exhibited a weak titan-like phenotype. Transgenic plants expressing AESP RNA interference (RNAi) from the meiosis-specific DMC1 promoter exhibited alterations in chromosome segregation during meiosis I and II that resulted in polyads containing from one to eight microspores. Plays an essential role in embryo development. Required for the removal of cohesin from meiotic chromosomes and establishment of meiotic nuclear domains. This gene was also identified through the rsw4 mutant. Lines carrying recessive, temperature-sensitive mutations exhibit reduced anisotropic growth at 30 degrees Celsius. Microtubules and cellulose microfibrils are not depleted or disoriented in the mutants at the restrictive temperature.","HOMOLOG OF SEPARASE (AESP)","RADIALLY SWOLLEN 4 (RSW4);HOMOLOG OF SEPARASE (AESP);HOMOLOGY OF SEPARASE 1 (AESP1)"]
["AT5G66130","cyan","Encodes a homolog to yeast RAD17. Involved in the regulation of DNA damage repair and homologous recombination. Mutant has increased sensitivity to MMS and increased telomere lengths.","RADIATION SENSITIVE 17 (ATRAD17)","RADIATION SENSITIVE 17 (ATRAD17);RADIATION SENSITIVE 17 (RAD17)"]
["AT5G55190","cyan","A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression. Role in seed and endosperm development.","RAN GTPASE 3 (RAN3)","RAN GTPASE 3 (ATRAN3);RAN GTPASE 3 (RAN3)"]
["AT3G63130","cyan","Encodes a RAN GTPase activating protein involved in nuclear import, cell plate formation and mitotic spindle formation. Associates with nuclear envelope membranes.","RAN GTPASE ACTIVATING PROTEIN 1 (RANGAP1)","RAN GTPASE ACTIVATING PROTEIN 1 (RANGAP1);RAN GTPASE-ACTIVATING PROTEIN 1 (ATRANGAP1)"]
["AT5G20020","cyan","A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression. Role in seed and endosperm development.","RAS-RELATED GTP-BINDING NUCLEAR PROTEIN 2 (RAN2)","RAS-RELATED GTP-BINDING NUCLEAR PROTEIN 2 (RAN2)"]
["AT4G34730","cyan","ribosome-binding factor A family protein;(source:Araport11)","RBFA DOMAIN-CONTAINING PROTEIN 1 (RBF1)","RBFA DOMAIN-CONTAINING PROTEIN 1 (RBF1)"]
["AT4G34220","cyan","Encodes a receptor like kinase involved in ABA-mediated seedling development and drought tolerance.RDK1 is an atypical or pseudokinase and has no phosphorylation activity. Its expression is upregulated in response to ABA.interacts with ABI1 and other PP2C phosphatases.","RECEPTOR DEAD KINASE1 (RDK1)","RECEPTOR DEAD KINASE1 (RDK1)"]
["AT1G48630","cyan","Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1B has no phenotype on its own and probably acts redundantly with RACK1A and RACK1C.","RECEPTOR FOR ACTIVATED C KINASE 1B (RACK1B_AT)","RECEPTOR FOR ACTIVATED C KINASE 1B (RACK1B_AT);RECEPTOR FOR ACTIVATED C KINASE 1B (RACK1B);RIBOSOMAL PROTEIN RACK1Y (RACK1Y)"]
["AT3G18130","cyan","Encodes a protein with similarity to mammalian RACKs. RACKs function to shuttle activated protein kinase C to different subcellular sites and may also function as a scaffold through physical interactions with other proteins. RACK1C has no phenotype on its own and probably acts redundantly with RACK1A and RACK1B.","RECEPTOR FOR ACTIVATED C KINASE 1C (RACK1C_AT)","RECEPTOR FOR ACTIVATED C KINASE 1C (RACK1C_AT);RECEPTOR FOR ACTIVATED C KINASE 1C (RACK1C);RIBOSOMAL PROTEIN RACK1X (RACK1X)"]
["AT2G33050","cyan","receptor like protein 26;(source:Araport11)","RECEPTOR LIKE PROTEIN 26 (RLP26)","RECEPTOR LIKE PROTEIN 26 (AtRLP26);RECEPTOR LIKE PROTEIN 26 (RLP26)"]
["AT5G40170","cyan","receptor like protein 54;(source:Araport11)","RECEPTOR LIKE PROTEIN 54 (RLP54)","RECEPTOR LIKE PROTEIN 54 (RLP54);RECEPTOR LIKE PROTEIN 54 (AtRLP54)"]
["AT3G18740","cyan","The gene encodes a putative leucine-rich repeat (LRR)Receptor-like kinase (RLK).","(RPL30C)","RECEPTOR-LIKE KINASE 902 (RLK902); (RPL30C);RIBOSOMAL PROTEIN EL30X (EL30X)"]
["AT4G16950","cyan","Contains a putative nucleotide binding site and leucine-rich repeats. Similar to the plant resistance genes N and L6, and to the toll and interleukin-1 receptors. Confers resistance to Peronospora parasitica.Redundant function together with SIKIC1 and 3 in SNC1-mediated autoimmunity. Protein levels controlled by MUSE1 and MUSE2.","RECOGNITION OF PERONOSPORA PARASITICA 5 (RPP5)","RECOGNITION OF PERONOSPORA PARASITICA 5 (RPP5);SIDEKICK SNC1 2 (SIKIC2)"]
["AT5G43470","cyan","Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus.","RECOGNITION OF PERONOSPORA PARASITICA 8 (RPP8)","RECOGNITION OF PERONOSPORA PARASITICA 8 (RPP8);RESISTANT TO CMV(Y) 1 (RCY1);HYPERSENSITIVE RESPONSE TO TCV (HRT)"]
["AT1G58520","cyan","GDSL-like lipase/acylhydrolase superfamily protein;(source:Araport11)","REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 2.1 (OSCA2.1)","REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 2.1 (OSCA2.1); (RXW8)"]
["AT1G69450","cyan","Early-responsive to dehydration stress protein (ERD4);(source:Araport11)","REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 2.4 (OSCA2.4)","REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 2.4 (OSCA2.4)"]
["AT4G02260","cyan","Displays guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity but not guanosine-3',5'-bis(diphosphate) 3'-diphosphate synthase activity. Involved in the maintenance of the (p)ppGp level to accustom plastidial gene expression to darkness.","RELA/SPOT HOMOLOG 1 (RSH1)","RELA/SPOT HOMOLOG 1 (RSH1);RELA-SPOT HOMOLOG 1 (AT-RSH1);RELA/SPOT HOMOLOG 1 (ATRSH1)"]
["AT2G28550","cyan","AP2 family transcription factor that is involved in regulation of flowering and innate immunity.Interacts with CRY2 to regulate CO and FT. TOE1 binds to activation domain of CO and binds CORE sequences of the FT promoter.TOE1/TOE2 are also targets of MiR172b and function in regulation of innate immunity.","RELATED TO AP2.7 (RAP2.7)","RELATED TO AP2.7 (RAP2.7)"]
["AT4G31530","cyan","Atypical short-chain dehydrogenase-reductase that functions as a qH-relaxation factor.","RELAXATION OF QH (ROQH)","RELAXATION OF QH (ROQH)"]
["AT2G41870","cyan","Remorin family protein;(source:Araport11)","REMORIN GROUP 4 2 (REM4.2)","REMORIN GROUP 4 2 (REM4.2); (ATREM4.2)"]
["AT1G21690","cyan","ATPase family associated with various cellular activities (AAA);(source:Araport11)","EMBRYO DEFECTIVE 1968 (emb1968)","REPLICATION FACTOR C 4 (RFC4);EMBRYO DEFECTIVE 1968 (emb1968)"]
["AT2G48070","cyan","Encodes a chloroplast protein RPH1 (resistance to Phytophthora 1). Involved in immune response to Phytophthora brassicae. rph1 mutant plants (in Ws background) are susceptible to P. brassicae.","RESISTANCE TO PHYTOPHTHORA 1 (RPH1)","RESISTANCE TO PHYTOPHTHORA 1 (RPH1)"]
["AT3G57040","cyan","response regulator ARR9, A two-component response regulator-like protein with a receiver domain with a conserved aspartate residue and a possible phosphorylation site and at the N-terminal half. Appears to interact with histidine kinase like genes ATHP3 and ATHP2","RESPONSE REGULATOR 9 (ARR9)","RESPONSE REGULATOR 9 (ARR9);RESPONSE REGULATOR 4 (ATRR4)"]
["AT5G22790","cyan","reticulata-related 1;(source:Araport11)","RETICULATA-RELATED 1 (RER1)","RETICULATA-RELATED 1 (RER1)"]
["AT2G43420","cyan","3-beta hydroxysteroid dehydrogenase/isomerase family protein;(source:Araport11)","RETICULON 20 (RTN20)","RETICULON 20 (RTN20)"]
["AT3G61560","cyan","Reticulon family protein;(source:Araport11)","RETICULONB6 (RTNLB6)","RETICULONB6 (RTNLB6);RETICULON 6 (RTN6)"]
["AT3G03450","cyan","Encodes a DELLA protein, a member of the GRAS superfamily of putative transcription factors. DELLA proteins restrain the cell proliferation and expansion that drives plant growth. Negative regulator of the response to GA in controlling seed germination. GA triggers the degradation of RGL2 protein in a process blocked by both proteasome inhibitors and serine/threonine phosphatase inhibitors. The protein undergoes degradation in response to GA via the 26S proteasome. RGL2 may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Rapidly degraded in response to GA. Regulates GA-promoted seed germination. Involved in flower and fruit development.","RGA-LIKE 2 (RGL2)","RGA-LIKE 2 (RGL2)"]
["AT3G08920","cyan","Rhodanese/Cell cycle control phosphatase superfamily protein;(source:Araport11)","RHODANESE-LIKE PROTEIN (STR10)","RHODANESE-LIKE PROTEIN (STR10)"]
["AT2G01290","cyan","Cytosolic ribose-5-phosphate isomerase. Knockout mutation causes chloroplast dysfunction, late flowering and premature cell death.","RIBOSE-5-PHOSPHATE ISOMERASE 2 (RPI2)","RIBOSE-5-PHOSPHATE ISOMERASE 2 (RPI2)"]
["AT5G02870","cyan","Ribosomal protein L4/L1 family;(source:Araport11)","RIBOSOMAL LARGE SUBUNIT 4 (RPL4)","RIBOSOMAL LARGE SUBUNIT 4 (RPL4);RIBOSOMAL PROTEIN UL4Y (UL4Y)"]
["AT1G43170","cyan","Encodes a cytoplasmic ribosomal protein. The mRNA is cell-to-cell mobile.","RIBOSOMAL PROTEIN 1 (RP1)","RIBOSOMAL PROTEIN 1 (ARP1);EMBRYO DEFECTIVE 2207 (emb2207); (RPL3A);RIBOSOMAL PROTEIN 1 (RP1);RIBOSOMAL PROTEIN UL3Z (UL3Z)"]
["AT3G11940","cyan","One of two genes encoding the ribosomal protein S5. Mutants have semi-dominant developmental phenotypes. Most cell-division processes are delayed or disturbed in the heterozygous mutant, and development is completely arrested at an early embryonic stage in the homozygous mutant.","RIBOSOMAL PROTEIN 5A (RPS5A)","RIBOSOMAL PROTEIN 5A (ATRPS5A);MEI2-LIKE PROTEIN 1 (AML1);ARABIDOPSIS MINUTE-LIKE 1 (AML1);RIBOSOMAL PROTEIN 5A (RPS5A);RIBOSOMAL PROTEIN US7Y (US7Y)"]
["AT2G37270","cyan","One of two genes encoding the ribosomal protein S5. Expressed at a lower level compared to ATRPS5A.","RIBOSOMAL PROTEIN 5B (RPS5B)","RIBOSOMAL PROTEIN 5B (ATRPS5B);RIBOSOMAL PROTEIN 5B (RPS5B);RIBOSOMAL PROTEIN US7Z (US7Z)"]
["AT4G37660","cyan","Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein;(source:Araport11)","RIBOSOMAL PROTEIN BL12MX (BL12MX)","RIBOSOMAL PROTEIN BL12MX (BL12MX)"]
["AT3G54210","cyan","Ribosomal protein L17 family protein;(source:Araport11)","PLASTID RIBOSOMAL PROTEINS OF THE 50S SUBUNIT 17 (PRPL17)","RIBOSOMAL PROTEIN BL17C (BL17C);PLASTID RIBOSOMAL PROTEINS OF THE 50S SUBUNIT 17 (PRPL17); (RPL17)"]
["AT5G64650","cyan","Ribosomal protein L17 family protein;(source:Araport11)","RIBOSOMAL PROTEIN BL17MY (BL17MY)","RIBOSOMAL PROTEIN BL17MY (BL17MY)"]
["AT5G09770","cyan","Ribosomal protein L17 family protein;(source:Araport11)","RIBOSOMAL PROTEIN BL17MZ (BL17MZ)","RIBOSOMAL PROTEIN BL17MZ (BL17MZ)"]
["AT5G47190","cyan","Ribosomal protein L19 family protein;(source:Araport11)","PLASTID RIBOSOMAL PROTEINS OF THE 50S SUBUNIT 19 (PRPL19)","RIBOSOMAL PROTEIN BL19CY (BL19CY);PLASTID RIBOSOMAL PROTEINS OF THE 50S SUBUNIT 19 (PRPL19)"]
["AT1G27435","cyan","hypothetical protein;(source:Araport11)","RIBOSOMAL PROTEIN BL31MZ (BL31MZ)","RIBOSOMAL PROTEIN BL31MZ (BL31MZ)"]
["AT5G20180","cyan","Ribosomal protein L36;(source:Araport11)","RIBOSOMAL PROTEIN BL36M (BL36M)","RIBOSOMAL PROTEIN BL36M (BL36M)"]
["AT5G53070","cyan","Ribosomal protein L9/RNase H1;(source:Araport11)","RIBOSOMAL PROTEIN BL9M (BL9M)","RIBOSOMAL PROTEIN BL9M (BL9M)"]
["AT5G56940","cyan","Ribosomal protein S16 family protein;(source:Araport11)","RIBOSOMAL PROTEIN BS16M (BS16M)","RIBOSOMAL PROTEIN BS16M (BS16M)"]
["AT1G07210","cyan","Ribosomal protein S18;(source:Araport11)","RIBOSOMAL PROTEIN BS18M (BS18M)","RIBOSOMAL PROTEIN BS18M (BS18M)"]
["AT5G17870","cyan","plastid-specific ribosomal protein 6 precursor (Psrp-6) - like","RIBOSOMAL PROTEIN CL38 (CL38)","RIBOSOMAL PROTEIN CL38 (CL38)"]
["AT5G23900","cyan","Ribosomal protein L13e family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL13X (EL13X)","RIBOSOMAL PROTEIN EL13X (EL13X)"]
["AT2G20450","cyan","Ribosomal protein L14;(source:Araport11)","RIBOSOMAL PROTEIN EL14Z (EL14Z)","RIBOSOMAL PROTEIN EL14Z (EL14Z)"]
["AT4G17390","cyan","Ribosomal protein L23/L15e family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL15Y (EL15Y)","RIBOSOMAL PROTEIN EL15Y (EL15Y)"]
["AT4G16720","cyan","Ribosomal protein L23/L15e family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL15Z (EL15Z)","RIBOSOMAL PROTEIN EL15Z (EL15Z)"]
["AT5G27850","cyan","Ribosomal protein L18e/L15 superfamily protein;(source:Araport11)","(RPL18C)","RIBOSOMAL PROTEIN EL18X (EL18X); (RPL18C)"]
["AT4G02230","cyan","Ribosomal protein L19e family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL19Y (EL19Y)","RIBOSOMAL PROTEIN EL19Y (EL19Y)"]
["AT1G57860","cyan","Translation protein SH3-like family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL21W (EL21W)","RIBOSOMAL PROTEIN EL21W (EL21W)"]
["AT1G57660","cyan","Translation protein SH3-like family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL21X (EL21X)","RIBOSOMAL PROTEIN EL21X (EL21X)"]
["AT1G09690","cyan","Translation protein SH3-like family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL21Y (EL21Y)","RIBOSOMAL PROTEIN EL21Y (EL21Y)"]
["AT1G09590","cyan","Translation protein SH3-like family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL21Z (EL21Z)","RIBOSOMAL PROTEIN EL21Z (EL21Z)"]
["AT5G27770","cyan","Ribosomal L22e protein family;(source:Araport11)","RIBOSOMAL PROTEIN EL22Y (EL22Y)","RIBOSOMAL PROTEIN EL22Y (EL22Y)"]
["AT3G05560","cyan","Ribosomal L22e protein family;(source:Araport11)","RIBOSOMAL PROTEIN EL22Z (EL22Z)","RIBOSOMAL PROTEIN EL22Z (EL22Z)"]
["AT3G53020","cyan","RPL24B encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B. Mutants showed defects in apical-basal gynoecium patterning similar to previously described ett and mp mutants. Transformation of stv1-1 mutant with a uORF-eliminated ETT construct partially suppressed the stv1 gynoecium phenotype, implying that STV1 could influence ETT translation through its uORFs. Regulated by TCP20.","SHORT VALVE1 (STV1)","RIBOSOMAL PROTEIN EL24Y (EL24Y);RIBOSOMAL PROTEIN L24 (RPL24); (RPL24B);SHORT VALVE1 (STV1)"]
["AT2G36620","cyan","RPL24A encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B (AT3G53020).","RIBOSOMAL PROTEIN L24 (RPL24A)","RIBOSOMAL PROTEIN EL24Z (EL24Z);RIBOSOMAL PROTEIN L24 (RPL24A)"]
["AT3G22230","cyan","Ribosomal L27e protein family;(source:Araport11)","RIBOSOMAL PROTEIN EL27Y (EL27Y)","RIBOSOMAL PROTEIN EL27Y (EL27Y)"]
["AT4G29410","cyan","Ribosomal L28e protein family;(source:Araport11)","RIBOSOMAL PROTEIN EL28Y (EL28Y)","RIBOSOMAL PROTEIN EL28Y (EL28Y)"]
["AT2G19730","cyan","Ribosomal L28e protein family;(source:Araport11)","RIBOSOMAL PROTEIN EL28Z (EL28Z)","RIBOSOMAL PROTEIN EL28Z (EL28Z)"]
["AT3G06700","cyan","Ribosomal L29e protein family;(source:Araport11)","RIBOSOMAL PROTEIN EL29Z (EL29Z)","RIBOSOMAL PROTEIN EL29Z (EL29Z)"]
["AT5G56710","cyan","Ribosomal protein L31e family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL31X (EL31X)","RIBOSOMAL PROTEIN EL31X (EL31X)"]
["AT4G26230","cyan","Ribosomal protein L31e family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL31Y (EL31Y)","RIBOSOMAL PROTEIN EL31Y (EL31Y)"]
["AT2G19740","cyan","Ribosomal protein L31e family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL31Z (EL31Z)","RIBOSOMAL PROTEIN EL31Z (EL31Z)"]
["AT5G46430","cyan","Ribosomal protein L32e;(source:Araport11)","RIBOSOMAL PROTEIN EL32Y (EL32Y)","RIBOSOMAL PROTEIN EL32Y (EL32Y)"]
["AT4G18100","cyan","Ribosomal protein L32e;(source:Araport11)","RIBOSOMAL PROTEIN EL32Z (EL32Z)","RIBOSOMAL PROTEIN EL32Z (EL32Z)"]
["AT1G07070","cyan","Ribosomal protein L35Ae family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL33W (EL33W)","RIBOSOMAL PROTEIN EL33W (EL33W)"]
["AT3G55750","cyan","Ribosomal protein L35Ae family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL33X (EL33X)","RIBOSOMAL PROTEIN EL33X (EL33X)"]
["AT1G41880","cyan","Ribosomal protein L35Ae family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL33Z (EL33Z)","RIBOSOMAL PROTEIN EL33Z (EL33Z)"]
["AT3G28900","cyan","Ribosomal protein L34e superfamily protein;(source:Araport11)","RIBOSOMAL PROTEIN EL34X (EL34X)","RIBOSOMAL PROTEIN EL34X (EL34X)"]
["AT1G26880","cyan","Ribosomal protein L34e superfamily protein;(source:Araport11)","RIBOSOMAL PROTEIN EL34Z (EL34Z)","RIBOSOMAL PROTEIN EL34Z (EL34Z)"]
["AT5G02450","cyan","Ribosomal protein L36e family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL36X (EL36X)","RIBOSOMAL PROTEIN EL36X (EL36X)"]
["AT3G53740","cyan","Ribosomal protein L36e family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL36Y (EL36Y)","RIBOSOMAL PROTEIN EL36Y (EL36Y)"]
["AT3G16080","cyan","Zinc-binding ribosomal protein family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL37X (EL37X)","RIBOSOMAL PROTEIN EL37X (EL37X)"]
["AT1G52300","cyan","Zinc-binding ribosomal protein family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL37Y (EL37Y)","RIBOSOMAL PROTEIN EL37Y (EL37Y)"]
["AT3G59540","cyan","Ribosomal L38e protein family;(source:Araport11)","RIBOSOMAL PROTEIN EL38Y (EL38Y)","RIBOSOMAL PROTEIN EL38Y (EL38Y)"]
["AT2G43460","cyan","Ribosomal L38e protein family;(source:Araport11)","RIBOSOMAL PROTEIN EL38Z (EL38Z)","RIBOSOMAL PROTEIN EL38Z (EL38Z)"]
["AT4G31985","cyan","Ribosomal protein L39 family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL39X (EL39X)","RIBOSOMAL PROTEIN EL39X (EL39X)"]
["AT2G25210","cyan","Ribosomal protein L39 family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL39Z (EL39Z)","RIBOSOMAL PROTEIN EL39Z (EL39Z)"]
["AT3G52590","cyan","Ubiquitin extension protein The mRNA is cell-to-cell mobile.","UBIQUITIN EXTENSION PROTEIN 1 (UBQ1)","RIBOSOMAL PROTEIN EL40Y (EL40Y);UBIQUITIN EXTENSION PROTEIN 1 (UBQ1);EMBRYO DEFECTIVE 2167 (EMB2167);EARLY-RESPONSIVE TO DEHYDRATION 16 (ERD16);HAPLESS 4 (HAP4)"]
["AT3G56020","cyan","Ribosomal protein L41 family;(source:Araport11)","RIBOSOMAL PROTEIN EL41V (EL41V)","RIBOSOMAL PROTEIN EL41V (EL41V)"]
["AT3G11120","cyan","Ribosomal protein L41 family;(source:Araport11)","RIBOSOMAL PROTEIN EL41W (EL41W)","RIBOSOMAL PROTEIN EL41W (EL41W)"]
["AT3G08520","cyan","Ribosomal protein L41 family;(source:Araport11)","RIBOSOMAL PROTEIN EL41X (EL41X)","RIBOSOMAL PROTEIN EL41X (EL41X)"]
["AT2G40205","cyan","Ribosomal protein L41 family;(source:Araport11)","RIBOSOMAL PROTEIN EL41Y (EL41Y)","RIBOSOMAL PROTEIN EL41Y (EL41Y)"]
["AT1G56045","cyan","Ribosomal protein L41 family;(source:Araport11)","RIBOSOMAL PROTEIN EL41Z (EL41Z)","RIBOSOMAL PROTEIN EL41Z (EL41Z)"]
["AT3G60245","cyan","Zinc-binding ribosomal protein family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL43Y (EL43Y)","RIBOSOMAL PROTEIN EL43Y (EL43Y)"]
["AT1G74050","cyan","Ribosomal protein L6 family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL6X (EL6X)","RIBOSOMAL PROTEIN EL6X (EL6X)"]
["AT1G74060","cyan","Ribosomal protein L6 family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL6Y (EL6Y)","RIBOSOMAL PROTEIN EL6Y (EL6Y)"]
["AT1G18540","cyan","Ribosomal protein L6 family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL6Z (EL6Z)","RIBOSOMAL PROTEIN EL6Z (EL6Z)"]
["AT3G62870","cyan","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL8Y (EL8Y)","RIBOSOMAL PROTEIN EL8Y (EL8Y)"]
["AT2G47610","cyan","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL8Z (EL8Z)","RIBOSOMAL PROTEIN EL8Z (EL8Z)"]
["AT5G52650","cyan","RNA binding Plectin/S10 domain-containing protein;(source:Araport11)","RIBOSOMAL PROTEIN ES10X (ES10X)","RIBOSOMAL PROTEIN ES10X (ES10X)"]
["AT4G25740","cyan","RNA binding Plectin/S10 domain-containing protein;(source:Araport11)","RIBOSOMAL PROTEIN ES10Z (ES10Z)","RIBOSOMAL PROTEIN ES10Z (ES10Z)"]
["AT2G32060","cyan","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES12Y (ES12Y)","RIBOSOMAL PROTEIN ES12Y (ES12Y)"]
["AT1G15930","cyan","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES12Z (ES12Z)","RIBOSOMAL PROTEIN ES12Z (ES12Z)"]
["AT2G05220","cyan","Ribosomal S17 family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES17Y (ES17Y)","RIBOSOMAL PROTEIN ES17Y (ES17Y)"]
["AT5G61170","cyan","Ribosomal protein S19e family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES19X (ES19X)","RIBOSOMAL PROTEIN ES19X (ES19X)"]
["AT3G02080","cyan","Ribosomal protein S19e family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES19Z (ES19Z)","RIBOSOMAL PROTEIN ES19Z (ES19Z)"]
["AT4G34670","cyan","Ribosomal protein S3Ae;(source:Araport11)","RIBOSOMAL PROTEIN ES1Y (ES1Y)","RIBOSOMAL PROTEIN ES1Y (ES1Y)"]
["AT3G04840","cyan","Ribosomal protein S3Ae;(source:Araport11)","RIBOSOMAL PROTEIN ES1Z (ES1Z)","RIBOSOMAL PROTEIN ES1Z (ES1Z)"]
["AT5G28060","cyan","Ribosomal protein S24e family protein;(source:Araport11)","(RPS24B)","RIBOSOMAL PROTEIN ES24Y (ES24Y); (RPS24B)"]
["AT3G04920","cyan","Ribosomal protein S24e family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES24Z (ES24Z)","RIBOSOMAL PROTEIN ES24Z (ES24Z)"]
["AT4G39200","cyan","Ribosomal protein S25 family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES25W (ES25W)","RIBOSOMAL PROTEIN ES25W (ES25W)"]
["AT2G21580","cyan","Ribosomal protein S25 family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES25Y (ES25Y)","RIBOSOMAL PROTEIN ES25Y (ES25Y)"]
["AT5G47930","cyan","Zinc-binding ribosomal protein family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES27W (ES27W)","RIBOSOMAL PROTEIN ES27W (ES27W)"]
["AT5G64140","cyan","Encodes a putative ribosomal protein S28.","RIBOSOMAL PROTEIN S28 (RPS28)","RIBOSOMAL PROTEIN ES28X (ES28X);RIBOSOMAL PROTEIN S28 (RPS28)"]
["AT5G03850","cyan","Nucleic acid-binding, OB-fold-like protein;(source:Araport11)","RIBOSOMAL PROTEIN ES28Y (ES28Y)","RIBOSOMAL PROTEIN ES28Y (ES28Y)"]
["AT3G10090","cyan","Nucleic acid-binding, OB-fold-like protein;(source:Araport11)","RIBOSOMAL PROTEIN ES28Z (ES28Z)","RIBOSOMAL PROTEIN ES28Z (ES28Z)"]
["AT5G58420","cyan","Ribosomal protein S4 (RPS4A) family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES4X (ES4X)","RIBOSOMAL PROTEIN ES4X (ES4X)"]
["AT5G07090","cyan","Ribosomal protein S4 (RPS4A) family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES4Y (ES4Y)","RIBOSOMAL PROTEIN ES4Y (ES4Y)"]
["AT2G17360","cyan","Ribosomal protein S4 (RPS4A) family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES4Z (ES4Z)","RIBOSOMAL PROTEIN ES4Z (ES4Z)"]
["AT5G16130","cyan","Ribosomal protein S7e family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES7X (ES7X)","RIBOSOMAL PROTEIN ES7X (ES7X)"]
["AT3G02560","cyan","Ribosomal protein S7e family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES7Y (ES7Y)","RIBOSOMAL PROTEIN ES7Y (ES7Y)"]
["AT1G48830","cyan","Ribosomal protein S7e family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES7Z (ES7Z)","RIBOSOMAL PROTEIN ES7Z (ES7Z)"]
["AT5G20290","cyan","Ribosomal protein S8e family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES8Z (ES8Z)","RIBOSOMAL PROTEIN ES8Z (ES8Z)"]
["AT3G27830","cyan","50S ribosomal protein L12-A The mRNA is cell-to-cell mobile.","RIBOSOMAL PROTEIN L12-A (RPL12-A)","RIBOSOMAL PROTEIN L12-A (RPL12-A);RIBOSOMAL PROTEIN L12 (RPL12);RIBOSOMAL PROTEIN BL12CZ (BL12CZ)"]
["AT4G18730","cyan","encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root and shoot apical meristems and in lateral root primordia. Expression in lateral root primordia is induced by auxin.","RIBOSOMAL PROTEIN L16B (RPL16B)","RIBOSOMAL PROTEIN L16B (RPL16B);RIBOSOMAL PROTEIN UL5X (UL5X)"]
["AT3G05590","cyan","Encodes cytoplasmic ribosomal protein L18.","RIBOSOMAL PROTEIN L18 (RPL18)","RIBOSOMAL PROTEIN L18 (RPL18);RIBOSOMAL PROTEIN EL18Y (EL18Y)"]
["AT1G69620","cyan","putative 60S ribosomal protein L34 The mRNA is cell-to-cell mobile.","RIBOSOMAL PROTEIN L34 (RPL34)","RIBOSOMAL PROTEIN L34 (RPL34);RIBOSOMAL PROTEIN EL34Y (EL34Y)"]
["AT2G37600","cyan","cytosolic ribosomal protein gene, part of eL36 familyl","RIBOSOMAL PROTEIN L36A (RPL36A)","RIBOSOMAL PROTEIN L36A (RPL36A);RIBOSOMAL PROTEIN EL36Z (EL36Z)"]
["AT1G07320","cyan","encodes a plastid ribosomal protein L4","RIBOSOMAL PROTEIN L4 (RPL4)","RIBOSOMAL PROTEIN L4 (RPL4);EMBRYO DEFECTIVE 2784 (EMB2784);PLASTID RIBOSOMAL PROTEIN L4 (PRPL4);RIBOSOMAL PROTEIN UL4C (UL4C)"]
["AT3G25520","cyan","Encodes ribosomal protein L5 that binds to 5S ribosomal RNA and in involved in its export from the nucleus to the cytoplasm. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2.","RIBOSOMAL PROTEIN L5 (ATL5)","RIBOSOMAL PROTEIN L5 (ATL5);PIGGYBACK3 (PGY3);RIBOSOMAL PROTEIN UL18Z (UL18Z);RIBOSOMAL PROTEIN L5 A (RPL5A);OLIGOCELLULA 5 (OLI5)"]
["AT3G44890","cyan","Plastid ribosomal protein CL9 The mRNA is cell-to-cell mobile.","RIBOSOMAL PROTEIN L9 (RPL9)","RIBOSOMAL PROTEIN L9 (RPL9);RIBOSOMAL PROTEIN BL9C (BL9C)"]
["AT5G40950","cyan","ribosomal protein large subunit 27;(source:Araport11)","RIBOSOMAL PROTEIN LARGE SUBUNIT 27 (RPL27)","RIBOSOMAL PROTEIN LARGE SUBUNIT 27 (RPL27);RIBOSOMAL PROTEIN BL27C (BL27C); (PRPL27)"]
["AT5G60670","cyan","Ribosomal protein L11 family protein;(source:Araport11)","RIBOSOMAL PROTEIN LIKE 12C (RPL12C)","RIBOSOMAL PROTEIN LIKE 12C (RPL12C);RIBOSOMAL PROTEIN UL11X (UL11X)"]
["AT3G59650","cyan","mitochondrial ribosomal protein L51/S25/CI-B8 family protein;(source:Araport11)","RIBOSOMAL PROTEIN ML43 (ML43)","RIBOSOMAL PROTEIN ML43 (ML43)"]
["AT5G39600","cyan","39S ribosomal protein;(source:Araport11)","RIBOSOMAL PROTEIN ML53 (ML53)","RIBOSOMAL PROTEIN ML53 (ML53)"]
["AT1G26750","cyan","hypothetical protein;(source:Araport11)","RIBOSOMAL PROTEIN MS23 (MS23)","RIBOSOMAL PROTEIN MS23 (MS23)"]
["AT4G22000","cyan","tyrosine sulfotransferase-like protein;(source:Araport11)","RIBOSOMAL PROTEIN MS82 (MS82)","RIBOSOMAL PROTEIN MS82 (MS82)"]
["AT4G15640","cyan","adenylyl cyclase;(source:Araport11)","RIBOSOMAL PROTEIN MS83 (MS83)","RIBOSOMAL PROTEIN MS83 (MS83)"]
["AT3G44590","cyan","cytosolic ribosomal protein gene, part of bL12 family","RIBOSOMAL PROTEIN P2D (RPP2D)","RIBOSOMAL PROTEIN P2D (RPP2D);RIBOSOMAL PROTEIN P2W (P2W)"]
["AT2G27710","cyan","60S acidic ribosomal protein family;(source:Araport11)","RIBOSOMAL PROTEIN P2Y (P2Y)","RIBOSOMAL PROTEIN P2Y (P2Y)"]
["AT2G27720","cyan","60S acidic ribosomal protein family;(source:Araport11)","RIBOSOMAL PROTEIN P2Z (P2Z)","RIBOSOMAL PROTEIN P2Z (P2Z)"]
["AT4G25890","cyan","60S acidic ribosomal protein family;(source:Araport11)","RIBOSOMAL PROTEIN P3Z (P3Z)","RIBOSOMAL PROTEIN P3Z (P3Z)"]
["AT5G41520","cyan","The gene belongs to the three-member Arabidopsis gene family encoding the eukaryote-specific protein S10e of the small cytoplasmic ribosomal subunit.","RIBOSOMAL PROTEIN S10E B (RPS10B)","RIBOSOMAL PROTEIN S10E B (RPS10B);RIBOSOMAL PROTEIN ES10Y (ES10Y)"]
["AT1G07770","cyan","Encodes cytoplasmic ribosomal protein S15a.","RIBOSOMAL PROTEIN S15A (RPS15A)","RIBOSOMAL PROTEIN S15A (RPS15A);RIBOSOMAL PROTEIN US8Z (US8Z)"]
["AT3G46040","cyan","Regulated by TCP20. The mRNA is cell-to-cell mobile.","RIBOSOMAL PROTEIN S15A D (RPS15AD)","RIBOSOMAL PROTEIN S15A D (RPS15AD);RIBOSOMAL PROTEIN US8X (US8X)"]
["AT3G56340","cyan","Small ribosomal subunit protein.","RIBOSOMAL PROTEIN S26E (RPS26E)","RIBOSOMAL PROTEIN S26E (RPS26E);RIBOSOMAL PROTEIN ES26X (ES26X)"]
["AT3G61110","cyan","Arabidopsis ribosomal protein","RIBOSOMAL PROTEIN S27 (RS27A)","RIBOSOMAL PROTEIN S27 (ARS27A);RIBOSOMAL PROTEIN S27 (RS27A);RIBOSOMAL PROTEIN ES27Y (ES27Y)"]
["AT4G31700","cyan","Encodes a putative ribosomal protein S6 (rps6a). RPS6A and RPS6B are fully redundant and essential during gametogenesis.","RIBOSOMAL PROTEIN S6 (RPS6)","RIBOSOMAL PROTEIN S6 (RPS6); (RPS6A); (ATRPS6);RIBOSOMAL PROTEIN ES6Z (ES6Z)"]
["AT1G74970","cyan","Ribosomal protein S9, nuclear encoded component of the chloroplast ribosome","RIBOSOMAL PROTEIN S9 (RPS9)","RIBOSOMAL PROTEIN S9 (RPS9); (TWN3); (SOT8); (PRPS9);RIBOSOMAL PROTEIN US9C (US9C)"]
["AT5G13510","cyan","Ribosomal protein L10 family protein;(source:Araport11)","EMBRYO DEFECTIVE 3136 (EMB3136)","RIBOSOMAL PROTEIN UL10C (UL10C);EMBRYO DEFECTIVE 3136 (EMB3136)"]
["AT3G09200","cyan","Ribosomal protein L10 family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL10Y (UL10Y)","RIBOSOMAL PROTEIN UL10Y (UL10Y)"]
["AT2G40010","cyan","Ribosomal protein L10 family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL10Z (UL10Z)","RIBOSOMAL PROTEIN UL10Z (UL10Z)"]
["AT3G53430","cyan","Ribosomal protein L11 family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL11Y (UL11Y)","RIBOSOMAL PROTEIN UL11Y (UL11Y)"]
["AT2G37190","cyan","Ribosomal protein L11 family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL11Z (UL11Z)","RIBOSOMAL PROTEIN UL11Z (UL11Z)"]
["AT3G24830","cyan","Mutant has decreased root skewing angle.","RIBOSOMAL PROTEIN UL13Y (UL13Y)","RIBOSOMAL PROTEIN UL13Y (UL13Y); (RPL13AB)"]
["AT3G07110","cyan","Ribosomal protein L13 family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL13Z (UL13Z)","RIBOSOMAL PROTEIN UL13Z (UL13Z); (RPL13AA)"]
["AT1G04480","cyan","Ribosomal protein L14p/L23e family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL14X (UL14X)","RIBOSOMAL PROTEIN UL14X (UL14X)"]
["AT2G33370","cyan","Ribosomal protein L14p/L23e family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL14Z (UL14Z)","RIBOSOMAL PROTEIN UL14Z (UL14Z)"]
["AT3G25920","cyan","encodes a plastid ribosomal protein CL15, a constituent of the large subunit of the ribosomal complex","RIBOSOMAL PROTEIN L15 (RPL15)","RIBOSOMAL PROTEIN UL15C (UL15C);RIBOSOMAL PROTEIN L15 (RPL15)"]
["AT1G70600","cyan","Ribosomal protein L18e/L15 superfamily protein;(source:Araport11)","RIBOSOMAL PROTEIN UL15X (UL15X)","RIBOSOMAL PROTEIN UL15X (UL15X)"]
["AT5G22440","cyan","Ribosomal protein L1p/L10e family;(source:Araport11)","RIBOSOMAL PROTEIN UL1X (UL1X)","RIBOSOMAL PROTEIN UL1X (UL1X)"]
["AT1G08360","cyan","Ribosomal protein L1p/L10e family;(source:Araport11)","RIBOSOMAL PROTEIN UL1Z (UL1Z)","RIBOSOMAL PROTEIN UL1Z (UL1Z)"]
["AT4G28360","cyan","Ribosomal protein L22p/L17e family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL22MY (UL22MY)","RIBOSOMAL PROTEIN UL22MY (UL22MY)"]
["AT1G67430","cyan","Ribosomal protein L22p/L17e family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL22Y (UL22Y)","RIBOSOMAL PROTEIN UL22Y (UL22Y)"]
["AT1G27400","cyan","Ribosomal protein L22p/L17e family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL22Z (UL22Z)","RIBOSOMAL PROTEIN UL22Z (UL22Z)"]
["AT3G55280","cyan","60S ribosomal protein L23A (RPL23aB). Paralog of RPL23aA and functionally redundant to it.","RIBOSOMAL PROTEIN L23AB (RPL23AB)","RIBOSOMAL PROTEIN UL23Y (UL23Y);RIBOSOMAL PROTEIN L23A2 (RPL23A2);RIBOSOMAL PROTEIN L23AB (RPL23AB)"]
["AT5G23535","cyan","KOW domain-containing protein;(source:Araport11)","RIBOSOMAL PROTEIN UL24M (UL24M)","RIBOSOMAL PROTEIN UL24M (UL24M)"]
["AT5G67510","cyan","Translation protein SH3-like family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL24Y (UL24Y)","RIBOSOMAL PROTEIN UL24Y (UL24Y)"]
["AT3G49910","cyan","Translation protein SH3-like family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL24Z (UL24Z)","RIBOSOMAL PROTEIN UL24Z (UL24Z)"]
["AT5G02610","cyan","Ribosomal L29 family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL29W (UL29W)","RIBOSOMAL PROTEIN UL29W (UL29W)"]
["AT3G55170","cyan","Ribosomal L29 family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL29X (UL29X)","RIBOSOMAL PROTEIN UL29X (UL29X)"]
["AT2G39390","cyan","Ribosomal L29 family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL29Y (UL29Y)","RIBOSOMAL PROTEIN UL29Y (UL29Y)"]
["AT3G09500","cyan","Ribosomal L29 family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL29Z (UL29Z)","RIBOSOMAL PROTEIN UL29Z (UL29Z)"]
["AT2G44065","cyan","Ribosomal protein L2 family;(source:Araport11)","RIBOSOMAL PROTEIN UL2M (UL2MY)","RIBOSOMAL PROTEIN UL2M (UL2MY)"]
["AT4G36130","cyan","Ribosomal protein L2 family;(source:Araport11)","RIBOSOMAL PROTEIN UL2X (UL2X)","RIBOSOMAL PROTEIN UL2X (UL2X)"]
["AT3G13580","cyan","Ribosomal protein L30/L7 family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL30W (UL30W)","RIBOSOMAL PROTEIN UL30W (UL30W)"]
["AT2G44120","cyan","Ribosomal protein L30/L7 family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL30X (UL30X)","RIBOSOMAL PROTEIN UL30X (UL30X)"]
["AT2G01250","cyan","Cytosolic ribosomal 60S subunit protein.","(RPL7B)","RIBOSOMAL PROTEIN UL30Y (UL30Y); (RPL7B)"]
["AT3G58700","cyan","Ribosomal L5P family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL5Y (UL5Y)","RIBOSOMAL PROTEIN UL5Y (UL5Y); (RPL16C)"]
["AT1G05190","cyan","Encodes the plastid 50S ribosomal protein L6.","EMBRYO DEFECTIVE 2394 (emb2394)","RIBOSOMAL PROTEIN UL6C (UL6C); (RPL6);EMBRYO DEFECTIVE 2394 (emb2394)"]
["AT4G10450","cyan","Ribosomal protein L6 family;(source:Araport11)","RIBOSOMAL PROTEIN UL6X (UL6X)","RIBOSOMAL PROTEIN UL6X (UL6X)"]
["AT1G33140","cyan","Encodes ribosomal protein L9. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV, KAN1 and KAN2. The mRNA is cell-to-cell mobile.","PIGGYBACK2 (PGY2)","RIBOSOMAL PROTEIN UL6Y (UL6Y);PIGGYBACK2 (PGY2)"]
["AT1G33120","cyan","Ribosomal protein L6 family;(source:Araport11)","RIBOSOMAL PROTEIN UL6Z (UL6Z)","RIBOSOMAL PROTEIN UL6Z (UL6Z)"]
["AT5G62300","cyan","Ribosomal protein S10p/S20e family protein;(source:Araport11)","RIBOSOMAL PROTEIN US10X (US10X)","RIBOSOMAL PROTEIN US10X (US10X)"]
["AT3G47370","cyan","Ribosomal protein S10p/S20e family protein;(source:Araport11)","RIBOSOMAL PROTEIN US10Y (US10Y)","RIBOSOMAL PROTEIN US10Y (US10Y)"]
["AT3G45030","cyan","Ribosomal protein S10p/S20e family protein;(source:Araport11)","RIBOSOMAL PROTEIN US10Z (US10Z)","RIBOSOMAL PROTEIN US10Z (US10Z)"]
["AT3G52580","cyan","Ribosomal protein S11 family protein;(source:Araport11)","RIBOSOMAL PROTEIN US11X (US11X)","RIBOSOMAL PROTEIN US11X (US11X)"]
["AT3G11510","cyan","Ribosomal protein S11 family protein;(source:Araport11)","RIBOSOMAL PROTEIN US11Y (US11Y)","RIBOSOMAL PROTEIN US11Y (US11Y)"]
["AT2G36160","cyan","Ribosomal protein S11 family protein;(source:Araport11)","RIBOSOMAL PROTEIN US11Z (US11Z)","RIBOSOMAL PROTEIN US11Z (US11Z)"]
["AT5G02960","cyan","Ribosomal protein S12/S23 family protein;(source:Araport11)","RIBOSOMAL PROTEIN US12Y (US12Y)","RIBOSOMAL PROTEIN US12Y (US12Y)"]
["AT5G14320","cyan","Ribosomal protein S13/S18 family;(source:Araport11)","EMBRYO DEFECTIVE 3137 (EMB3137)","RIBOSOMAL PROTEIN US13C (US13C);EMBRYO DEFECTIVE 3137 (EMB3137)"]
["AT1G34030","cyan","Ribosomal protein S13/S18 family;(source:Araport11)","RIBOSOMAL PROTEIN US13Y (US13Y)","RIBOSOMAL PROTEIN US13Y (US13Y)"]
["AT4G33865","cyan","Ribosomal protein S14p/S29e family protein;(source:Araport11)","RIBOSOMAL PROTEIN US14X (US14X)","RIBOSOMAL PROTEIN US14X (US14X)"]
["AT3G43980","cyan","Ribosomal protein S14p/S29e family protein;(source:Araport11)","RIBOSOMAL PROTEIN US14Z (US14Z)","RIBOSOMAL PROTEIN US14Z (US14Z)"]
["AT1G15810","cyan","S15/NS1, RNA-binding protein;(source:Araport11)","RIBOSOMAL PROTEIN US15MZ (US15MZ)","RIBOSOMAL PROTEIN US15MZ (US15MZ)"]
["AT3G60770","cyan","Ribosomal protein S13/S15;(source:Araport11)","RIBOSOMAL PROTEIN US15Z (US15Z)","RIBOSOMAL PROTEIN US15Z (US15Z)"]
["AT1G79850","cyan","nuclear-encoded 30S chloroplast ribosomal protein S17","RIBOSOMAL PROTEIN S17 (RPS17)","RIBOSOMAL PROTEIN US17C (US17C);PIGMENT DEFECTIVE 347 (PDE347); (CS17);RIBOSOMAL PROTEIN S17 (RPS17);PLASTID RIBOSOMAL SMALL SUBUNIT PROTEIN 17 (PRPS17)"]
["AT5G23740","cyan","Encodes a putative ribosomal protein S11 (RPS11-beta).","RIBOSOMAL PROTEIN S11-BETA (RPS11-BETA)","RIBOSOMAL PROTEIN US17X (US17X);RIBOSOMAL PROTEIN S11-BETA (RPS11-BETA)"]
["AT3G48930","cyan","Nucleic acid-binding, OB-fold-like protein;(source:Araport11)","EMBRYO DEFECTIVE 1080 (EMB1080)","RIBOSOMAL PROTEIN US17Z (US17Z);EMBRYO DEFECTIVE 1080 (EMB1080)"]
["ATCG00800","cyan","encodes a chloroplast ribosomal protein S3, a constituent of the small subunit of the ribosomal complex","RESISTANCE TO PSEUDOMONAS SYRINGAE 3 (RPS3)","RIBOSOMAL PROTEIN US3C (US3C)"]
["AT5G35530","cyan","Ribosomal protein S3 family protein;(source:Araport11)","RIBOSOMAL PROTEIN US3X (US3X)","RIBOSOMAL PROTEIN US3X (US3X)"]
["AT3G53870","cyan","Ribosomal protein S3 family protein;(source:Araport11)","RIBOSOMAL PROTEIN US3Y (US3Y)","RIBOSOMAL PROTEIN US3Y (US3Y)"]
["AT2G31610","cyan","Ribosomal protein S3 family protein;(source:Araport11)","RIBOSOMAL PROTEIN US3Z (US3Z)","RIBOSOMAL PROTEIN US3Z (US3Z)"]
["AT5G15200","cyan","Ribosomal protein S4;(source:Araport11)","RIBOSOMAL PROTEIN US4Z (US4Z)","RIBOSOMAL PROTEIN US4Z (US4Z)"]
["AT1G58983","cyan","Ribosomal protein S5 family protein;(source:Araport11)","RIBOSOMAL PROTEIN US5U (US5U)","RIBOSOMAL PROTEIN US5U (US5U)"]
["AT1G58684","cyan","Ribosomal protein S5 family protein;(source:Araport11)","RIBOSOMAL PROTEIN US5V (US5V)","RIBOSOMAL PROTEIN US5V (US5V)"]
["AT3G57490","cyan","Ribosomal protein S5 family protein;(source:Araport11)","RIBOSOMAL PROTEIN US5W (US5W)","RIBOSOMAL PROTEIN US5W (US5W)"]
["AT2G41840","cyan","Ribosomal protein S5 family protein;(source:Araport11)","RIBOSOMAL PROTEIN US5X (US5X)","RIBOSOMAL PROTEIN US5X (US5X)"]
["AT1G59359","cyan","Ribosomal protein S5 family protein;(source:Araport11)","RIBOSOMAL PROTEIN US5Y (US5Y)","RIBOSOMAL PROTEIN US5Y (US5Y)"]
["AT5G59850","cyan","Ribosomal protein S8 family protein;(source:Araport11)","RIBOSOMAL PROTEIN US8W (US8W)","RIBOSOMAL PROTEIN US8W (US8W)"]
["AT5G18380","cyan","Ribosomal protein S5 domain 2-like superfamily protein;(source:Araport11)","RIBOSOMAL PROTEIN US9X (US9X)","RIBOSOMAL PROTEIN US9X (US9X)"]
["AT2G09990","cyan","Ribosomal protein S5 domain 2-like superfamily protein;(source:Araport11)","RIBOSOMAL PROTEIN US9Z (US9Z)","RIBOSOMAL PROTEIN US9Z (US9Z)"]
["AT3G16780","cyan","Ribosomal protein L19e family protein;(source:Araport11)","RIBSOMAL PROTEIN LIKE 19B (RPL19B)","RIBSOMAL PROTEIN LIKE 19B (RPL19B);RIBOSOMAL PROTEIN EL19Z (EL19Z)"]
["AT4G14220","cyan","encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. RHF1a can interact with the cell cycle inhibitor ICK4/KRP6 in vitro. It apppears to target ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF1a is expressed in the carpels throughout floral development. It is expressed in various tissues of the anthers during the early stages of anther development but not in stage 12 flowers and beyond. The mRNA is cell-to-cell mobile.","RING-H2 GROUP F1A (RHF1A)","RING-H2 GROUP F1A (RHF1A)"]
["AT3G11770","cyan","RICE1 is a 23kDa protein with 3?- 5? exoribonuclease activity. It is expressed ubiquitously and localized to the cytoplasm. When RICE1 and its paralog RICE2 are knocked down, miRNA levels are decreased. RICE1 interacts with AGO1 and AGO10. It may affect miRNA accumulation by clearing RISC by degrading 5? products of AGO cleavage.","RISC-INTERACTING CLEARING 3?- 5? EXORIBONUCLEASE 1 (RICE1)","RISC-INTERACTING CLEARING 3?- 5? EXORIBONUCLEASE 1 (RICE1)"]
["AT5G06450","cyan","RICE2 is cytoplasmically localized and has 3?- 5? exoribonuclease activity. When RICE2 and its paralog RICE1 are knocked down, miRNA levels are decreased. RICE1 interacts with AGO1 and AGO10. It may affect miRNA accumulation by clearing RISC by degrading 5? products of AGO cleavage","RISC-INTERACTING CLEARING 3?- 5? EXORIBONUCLEASE 2 (RICE2)","RISC-INTERACTING CLEARING 3?- 5? EXORIBONUCLEASE 2 (RICE2)"]
["AT2G33410","cyan","Belongs to a member of the RNA-binding glycine-rich (RBG) gene superfamily. The mRNA is cell-to-cell mobile.","RNA-BINDING GLYCINE-RICH PROTEIN D2 (RBGD2)","RNA-BINDING GLYCINE-RICH PROTEIN D2 (RBGD2)"]
["AT4G14300","cyan","Belongs to a member of the RNA-binding glycine-rich (RBG) gene superfamily.","RNA-BINDING GLYCINE-RICH PROTEIN D4 (RBGD4)","RNA-BINDING GLYCINE-RICH PROTEIN D4 (RBGD4); (ATRNP1)"]
["AT5G54900","cyan","RNA-binding protein 45A;(source:Araport11)","RNA-BINDING PROTEIN 45A (RBP45A)","RNA-BINDING PROTEIN 45A (RBP45A);RNA-BINDING PROTEIN 45A (ATRBP45A)"]
["AT3G19130","cyan","RBP47B, is a component of the stress granule proteome and interacts with 2',3'-cAMP.","RNA-BINDING PROTEIN 47B (RBP47B)","RNA-BINDING PROTEIN 47B (ATRBP47B);RNA-BINDING PROTEIN 47B (RBP47B)"]
["AT1G08540","cyan","Enodes a subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme. SIG1 is induced by red and blue light.","RNAPOLYMERASE SIGMA SUBUNIT 2 (SIG2)","RNAPOLYMERASE SIGMA SUBUNIT 2 (SIG2); (ABC1);SIGMA FACTOR 1 (ATSIG1); (SIGA);SIGMA FACTOR B (SIGB);RNA POLYMERASE SIGMA SUBUNIT 1 (SIG1);SIGMA FACTOR 2 (ATSIG2)"]
["AT3G53920","cyan","Encodes a sigma-like transcription factor, Sigma 3 (SIG3 or SIGC). As a subunit of chloroplast RNA polymerase, SIG3 confers the ability to recognize promoter sequences on the core enzyme. SIG3 transcribes specifically the psbN gene in plastids.","RNAPOLYMERASE SIGMA-SUBUNIT C (SIGC)","RNAPOLYMERASE SIGMA-SUBUNIT C (SIGC);SIGMA FACTOR 3 (SIG3)"]
["AT1G66470","cyan","Basic helix loop helix transcription factor that regulates root hair initiation.","ROOT HAIR DEFECTIVE6 (RHD6)","ROOT HAIR DEFECTIVE6 (RHD6); (AtRHD6)"]
["AT2G30520","cyan","Encodes a phototropin-interacting NRL protein that is an early signaling component in the phototrophic response and is essential for the phototropin-mediated chloroplast accumulation response but is not involved in the chloroplast avoidance response or stomatal opening.","ROOT PHOTOTROPISM 2 (RPT2)","ROOT PHOTOTROPISM 2 (RPT2)"]
["AT4G34870","cyan","belongs to cyclophilin family","ROTAMASE CYCLOPHILIN 5 (ROC5)","ROTAMASE CYCLOPHILIN 5 (ROC5);ARABIDOPSIS THALIANA CYCLOPHILIN 1 (ATCYP1)"]
["AT2G16600","cyan","Encodes cytosolic cyclophilin ROC3. The mRNA is cell-to-cell mobile.","ROTAMASE CYP 3 (ROC3)","ROTAMASE CYP 3 (ROC3);CYCLOPHILIN 19 (CYP19); (ATCYP19-1)"]
["AT5G05780","cyan","Encodes a putative 26S proteasome subunit RPN8a. The function of RPN8a and other 26S subunits may be required for specifying leaf adaxial identity. The mRNA is cell-to-cell mobile.","RP NON-ATPASE SUBUNIT 8A (RPN8A)","RP NON-ATPASE SUBUNIT 8A (RPN8A); (ATHMOV34);ASYMMETRIC LEAVES ENHANCER 3 (AE3)"]
["AT3G23390","cyan","Zinc-binding ribosomal protein family protein;(source:Araport11)","RPL36A A (RPL36AA)","RPL36A A (RPL36AA);RIBOSOMAL PROTEIN EL42Z (EL42Z)"]
["AT4G14320","cyan","Zinc-binding ribosomal protein family protein;(source:Araport11)","RPL36A B (RPL36AB)","RPL36A B (RPL36AB);APICULATA 2 (API2);RIBOSOMAL PROTEIN EL42Y (EL42Y)"]
["AT4G27490","cyan","3-5-exoribonuclease family protein;(source:Araport11)","RRP41 LIKE (RRP41L)","RRP41 LIKE (RRP41L)"]
["AT2G24590","cyan","Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926.","RS-CONTAINING ZINC FINGER PROTEIN 22A (RSZ22a)","RS-CONTAINING ZINC FINGER PROTEIN 22A (RSZ22a);RS-CONTAINING ZINC FINGER PROTEIN 22A (At-RSZ22a)"]
["AT3G04550","cyan","Encodes an ancillary chaperone protein that functions in Rubisco biogenesis. RAF1 dimers function in the assembly of the large subunit of Rubisco. Co-expression of RAF1 and rbcL in tobacco cells results in increased photosynthesis and plant growth. The mRNA is cell-to-cell mobile.","RUBISCO ACCUMULATION FACTOR 1 (RAF1)","RUBISCO ACCUMULATION FACTOR 1 (RAF1)"]
["AT5G38430","cyan","Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410).","RUBISCO SMALL SUBUNIT 1B (RBCS1B)","RUBISCO SMALL SUBUNIT 1B (RBCS1B)"]
["AT5G38410","cyan","Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410). Functions to yield sufficient Rubisco content for leaf photosynthetic capacity.","RUBISCO SMALL SUBUNIT 3B (RBCS3B)","RUBISCO SMALL SUBUNIT 3B (RBCS3B);RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A (RBCS1A)"]
["AT5G18700","cyan","Encodes a microtubule-associated kinase-like protein RUNKEL (RUK). Contains a putative serine/threonine kinase domain and a microtubule-binding domain. RUK directly binds to microtubules in vitro and colocalizes with mitotic preprophase band, spindle, and phragmoplast in vivo. Required for cell plate expansion in cytokinesis.","RUNKEL (RUK)","RUNKEL (RUK); (RUK);EMBRYO DEFECTIVE 3013 (EMB3013)"]
["AT1G12800","cyan","SDP is a chloroplast localized RNA binding protein that is required for plastid rRNA processing. Plants harboring a mutation in SDP have numerous defects including reduced chlorophyll content, poor growth, yellow leaves and abnormal chloroplasts.","S1 DOMAIN-CONTAINING RBP (SDP)","S1 DOMAIN-CONTAINING RBP (SDP)"]
["AT3G23700","cyan","Encodes a chloroplast-localized S1 domain-containing protein with RNA chaperone activity that affects the splicing and processing of chloroplast transcripts and plays a role in seedling growth in the presence of ABA. Binds the chloroplast psbA RNA and some other chloroplast RNAs. Required for the stability of the chloroplast ndhC RNA. Inhibits ribosome association with psbA RNA and ycf1 RNA. Not required for the splicing of chloroplast trnL, as had been reported previously.","S1 RNA-BINDING RIBOSOMAL PROTEIN 1 (SRRP1)","S1 RNA-BINDING RIBOSOMAL PROTEIN 1 (SRRP1)"]
["AT4G09800","cyan","encodes a ribosomal protein S18C, a constituent of the small subunit of the ribosomal complex","S18 RIBOSOMAL PROTEIN (RPS18C)","S18 RIBOSOMAL PROTEIN (RPS18C);RIBOSOMAL PROTEIN US13X (US13X)"]
["AT4G39460","cyan","Encodes a plastid metabolite transporter required for the import of S-Adenosylmethionine from the cytosol. Impaired function of SAMT1 led to decreased accumulation of prenyllipids and mainly affected the chlorophyll pathway.","S-ADENOSYLMETHIONINE CARRIER 1 (SAMC1)","S-ADENOSYLMETHIONINE CARRIER 1 (SAMC1);SAM TRANSPORTER1 (SAMT1)"]
["AT5G28626","cyan","Member of Sadhu non-coding retrotransposon family The mRNA is cell-to-cell mobile.","SADHU NON-CODING RETROTRANSPOSON 1-3 (SADHU1-3)","SADHU NON-CODING RETROTRANSPOSON 1-3 (SADHU1-3)"]
["AT5G03350","cyan","Belongs to the group of early SA-activated genes. Involved in resistance to Pst Avr-Rpm1 as a component of the SA35 mediated defense processes associated to the ETI response. Involved in resistance to P.syringae pv. tomato Avr-Rpm1 in Arabidopsis, as a component of the SA-mediated defense processes associated with the effector-triggered immunity response.","SA-INDUCED LEGUME LECTIN-LIKE PROTEIN 1 (SAI-LLP1)","SA-INDUCED LEGUME LECTIN-LIKE PROTEIN 1 (SAI-LLP1)"]
["AT5G51110","cyan","Encodes a protein involved in Rubisco assembly that also mediates Abscisic acid-dependent stress response. It is a ubiquitination target of the intracellular E3 ligase SDIR1. It selectively regulates the expression of the downstream basic region/leucine zipper motif transcription factor gene ABA-INSENSITIVE5, rather than ABA-RESPONSIVE ELEMENTS BINDING FACTOR3 (ABF3) or ABF4, to regulate ABA-mediated seed germination and the plant salt response.","SDIR1-INTERACTING PROTEIN1 (SDIRIP1)","SDIR1-INTERACTING PROTEIN1 (SDIRIP1);RUBISCO ASSEMBLY FACTOR 2 (RAF2);ATAIRP2 TARGET PROTEIN 1 (ATP1)"]
["AT3G23800","cyan","selenium-binding protein 3;(source:Araport11)","SELENIUM-BINDING PROTEIN 3 (SBP3)","SELENIUM-BINDING PROTEIN 3 (SBP3)"]
["AT4G02380","cyan","Encodes AtLEA5 (late embryogenesis abundant like protein). Also known as SENESCENCE-ASSOCIATED GENE 21 (SAG21). Has a role on oxidative stress tolerance. mRNA levels are elevated in response to various stresses.","SENESCENCE-ASSOCIATED GENE 21 (SAG21)","SENESCENCE-ASSOCIATED GENE 21 (SAG21);ARABIDOPSIS THALIANA LATE EMBRYOGENENSIS ABUNDANT LIKE 5 (AtLEA5);LATE EMBRYOGENESIS ABUNDANT 38 (LEA38); (LEA5)"]
["AT5G45610","cyan","Encodes a homologue of the ATR-interacting protein ATRIP. Mutant (named sensitive to UV2 or suv2) is UVB-hypersensitive and defective in DNA damage response.","SENSITIVE TO UV 2 (SUV2)","SENSITIVE TO UV 2 (SUV2)"]
["AT4G12910","cyan","serine carboxypeptidase-like 20;(source:Araport11)","SERINE CARBOXYPEPTIDASE-LIKE 20 (scpl20)","SERINE CARBOXYPEPTIDASE-LIKE 20 (scpl20)"]
["AT3G07990","cyan","serine carboxypeptidase-like 27;(source:Araport11)","SERINE CARBOXYPEPTIDASE-LIKE 27 (SCPL27)","SERINE CARBOXYPEPTIDASE-LIKE 27 (SCPL27)"]
["AT4G30810","cyan","serine carboxypeptidase-like 29;(source:Araport11)","SERINE CARBOXYPEPTIDASE-LIKE 29 (scpl29)","SERINE CARBOXYPEPTIDASE-LIKE 29 (scpl29)"]
["AT5G08260","cyan","serine carboxypeptidase-like 35;(source:Araport11)","SERINE CARBOXYPEPTIDASE-LIKE 35 (scpl35)","SERINE CARBOXYPEPTIDASE-LIKE 35 (scpl35)"]
["AT1G43780","cyan","serine carboxypeptidase-like 44;(source:Araport11)","SERINE CARBOXYPEPTIDASE-LIKE 44 (scpl44)","SERINE CARBOXYPEPTIDASE-LIKE 44 (scpl44)"]
["AT2G23010","cyan","serine carboxypeptidase-like 9;(source:Araport11)","SERINE CARBOXYPEPTIDASE-LIKE 9 (SCPL9)","SERINE CARBOXYPEPTIDASE-LIKE 9 (SCPL9)"]
["AT2G35500","cyan","Encodes a protein with some sequence similarity to shikimate kinases, but a truncated form of this protein (lacking a putative N-terminal chloroplast transit peptide) does not have shikimate kinase activity in vitro.","SHIKIMATE KINASE-LIKE 2 (SKL2)","SHIKIMATE KINASE-LIKE 2 (SKL2)"]
["AT1G79075","cyan","Has been identified as a translated small open reading frame by ribosome profiling.","SHORT OPEN READING FRAME 17 (SORF17)","SHORT OPEN READING FRAME 17 (SORF17)"]
["AT3G12965","cyan","Has been identified as a translated small open reading frame by ribosome profiling.","SHORT OPEN READING FRAME 23 (SORF23)","SHORT OPEN READING FRAME 23 (SORF23)"]
["AT3G15390","cyan","Encodes a novel protein that is similar to PRL1 interacting factor and is involved in virus induced silencing.","SILENCING DEFECTIVE 5 (SDE5)","SILENCING DEFECTIVE 5 (SDE5)"]
["AT4G26840","cyan","Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets.","SMALL UBIQUITIN-LIKE MODIFIER 1 (SUMO1)","SMALL UBIQUITIN-LIKE MODIFIER 1 (SUM1);SMALL UBIQUITIN-LIKE MODIFIER 1 (SUMO 1);SMALL UBIQUITIN-LIKE MODIFIER 1 (SUMO1);ARABIDOPSIS THALIANA SMALL UBIQUITIN-LIKE MODIFIER 1 (ATSUMO1)"]
["AT1G78290","cyan","encodes a member of SNF1-related protein kinase (SnRK2) family whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress and dehydration.","SNF1-RELATED PROTEIN KINASE 2-8 (SNRK2-8)","SNF1-RELATED PROTEIN KINASE 2-8 (SNRK2-8);SNF1-RELATED PROTEIN KINASE 2.8 (SNRK2.8);SNF1-RELATED PROTEIN KINASE 2C (SRK2C)"]
["AT5G10930","cyan","Encodes CBL-interacting protein kinase 5 (CIPK5).","CBL-INTERACTING PROTEIN KINASE 5 (CIPK5)","SNF1-RELATED PROTEIN KINASE 3.24 (SnRK3.24);CBL-INTERACTING PROTEIN KINASE 5 (CIPK5)"]
["AT1G62750","cyan","Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants.","SNOWY COTYLEDON 1 (SCO1)","SNOWY COTYLEDON 1 (ATSCO1); (ATSCO1/CPEF-G);SNOWY COTYLEDON 1 (SCO1)"]
["AT5G58380","cyan","Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase.","SOS3-INTERACTING PROTEIN 1 (SIP1)","SOS3-INTERACTING PROTEIN 1 (SIP1); (PKS2);CBL-INTERACTING PROTEIN KINASE 10 (CIPK10);SNF1-RELATED PROTEIN KINASE 3.8 (SNRK3.8)"]
["AT5G01920","cyan","Chloroplast thylakoid protein kinase STN8 is specific in phosphorylation of N-terminal threonine residues in D1, D2 and CP43 proteins, and Thr-4 in PsbH protein of photosystem II. Phosphorylation of Thr-4 in the wild type required both light and prior phosphorylation at Thr-2.","STATE TRANSITION 8 (STN8)","STATE TRANSITION 8 (STN8)"]
["AT4G12970","cyan","Encodes a cysteine-rich peptide, a secretory factor that is produced in the mesophyll cells and acts on the epidermis to increase stomatal formation. Its mature form is a 45-aa peptide with three intramolecular disulfide bonds. It is proposed that STOMAGEN increases stomatal number by competing with two negative regulators of stomatal density, EPF1 and EPF2. STOMAGEN has been shown to compete with EPF2 for binding to the ER and TMM receptor kinases.Binding of STOMAGEN to ER prevents induction of the EPF2-ER MAPK cascade. It's transcript levels change after inducing MUTE expression in a mute background.","STOMAGEN (STOMAGEN)","STOMAGEN (STOMAGEN);EPIDERMAL PATTERNING FACTOR LIKE-9 (EPFL9); (ATEPFL9)"]
["AT4G34190","cyan","Encodes a stress enhanced protein that localizes to the thylakoid membrane and whose mRNA is upregulated in response to high light intensity. It may be involved in chlorophyll binding.","STRESS ENHANCED PROTEIN 1 (SEP1)","STRESS ENHANCED PROTEIN 1 (SEP1)"]
["AT2G20850","cyan","STRUBBELIG-receptor family 1;(source:Araport11)","STRUBBELIG-RECEPTOR FAMILY 1 (SRF1)","STRUBBELIG-RECEPTOR FAMILY 1 (SRF1)"]
["AT5G51750","cyan","subtilase 1.3;(source:Araport11)","SUBTILASE 1.3 (SBT1.3)","SUBTILASE 1.3 (SBT1.3);SUBTILASE 1.3 (ATSBT1.3)"]
["AT5G11110","cyan","Encodes a sucrose-phosphate synthase involved in pollen exine formation. This is the dominant SPS isoform in leaves with respect to protein levels.","SUCROSE PHOSPHATE SYNTHASE 2F (SPS2F)","SUCROSE PHOSPHATE SYNTHASE 1 (SPS1);SUCROSE PHOSPHATE SYNTHASE 2F (ATSPS2F);SUCROSE-PHOSPHATE SYNTHASE A2 (SPSA2);SUCROSE PHOSPHATE SYNTHASE 2F (SPS2F);KAONASHI 2 (KNS2)"]
["AT1G71880","cyan","Sucrose transporter gene induced in response to nematodes; member of Sucrose-proton symporter family. The mRNA is cell-to-cell mobile.","SUCROSE-PROTON SYMPORTER 1 (SUC1)","SUCROSE-PROTON SYMPORTER 1 (SUC1);ARABIDOPSIS THALIANA SUCROSE-PROTON SYMPORTER 1 (ATSUC1)"]
["AT4G33030","cyan","involved in sulfolipid biosynthesis The mRNA is cell-to-cell mobile.","SULFOQUINOVOSYLDIACYLGLYCEROL 1 (SQD1)","SULFOQUINOVOSYLDIACYLGLYCEROL 1 (SQD1)"]
["AT1G74100","cyan","encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with different desulfoglucosinolates, the best substrate is indole-3-methyl-dsGS, followed by benzyl-dsGS. Expression was induced by wounding, jasmonate and ethylene stimulates.","SULFOTRANSFERASE 16 (SOT16)","SULFOTRANSFERASE 16 (SOT16);ARABIDOPSIS SULFOTRANSFERASE 5A (ATST5A);CORONATINE INDUCED-7 (CORI-7);SULFOTRANSFERASE 16 (ATSOT16)"]
["AT3G07880","cyan","RhoGTPase GDP dissociation inhibitor (RhoGDI) that spatially restricts the sites of growth to a single point on the trichoblast. It regulates the NADPH oxidase RHD2/AtrbohC, which is required for hair growth.","SUPERCENTIPEDE1 (SCN1)","SUPERCENTIPEDE1 (SCN1)"]
["AT1G14320","cyan","Encodes a ribosomal protein L10 and may be involved in translation regulation. Semi-dominant mutations in SAC552 can suppress defects in acaulis5, which encodes a thermospermine synthase, by enhancing translation of acl5 and itself.","SUPPRESSOR OF ACAULIS 52 (SAC52)","SUPPRESSOR OF ACAULIS 52 (SAC52);RIBOSOMAL PROTEIN L10 (RPL10);RIBOSOMAL PROTEIN L10 A (RPL10A);RIBOSOMAL PROTEIN UL16Z (UL16Z)"]
["AT3G09630","cyan","Ribosomal protein L4/L1 family;(source:Araport11)","SUPPRESSOR OF ACAULIS 56 (SAC56)","SUPPRESSOR OF ACAULIS 56 (SAC56);RIBOSOMAL PROTEIN UL4Z (UL4Z)"]
["AT2G31880","cyan","Encodes a putative leucine rich repeat transmembrane protein that is expressed in response to Pseudomonas syringae. Expression of SRRLK may be required for silencing via lsiRNAs. Regulates cell death and innate immunity.","SUPPRESSOR OF BIR1 1 (SOBIR1)","SUPPRESSOR OF BIR1 1 (SOBIR1);EVERSHED (EVR)"]
["AT1G56500","cyan","Encodes a thylakoid membrane protein with thioredoxin-like and beta-propeller domains located in the lumen and a haloacid-dehalogenase domain exposed to the chloroplast stroma. The protein's role may be to prevent formation of a slowly reversible form of antenna quenching, thereby maintaining the efficiency of light harvesting. The mRNA is cell-to-cell mobile.","SUPPRESSOR OF QUENCHING 1 (SOQ1)","SUPPRESSOR OF QUENCHING 1 (SOQ1)"]
["AT1G09310","cyan","ABA responsive trichome formation regulator.","(SVB2)","SVB-LIKE (SVBL); (SVB2)"]
["AT5G60120","cyan","AP2 family transcription factor that is involved in regulation of flowering and innate immunity.Interacts with CRY1 and CRY2 during flowering as part of a regulatory circuit including FT and CO. TOE1/TOE2 are also targets of MiR172b repression and functions in regulation of innate immunity via repression of FLS.","TARGET OF EARLY ACTIVATION TAGGED (EAT) 2 (TOE2)","TARGET OF EARLY ACTIVATION TAGGED (EAT) 2 (TOE2)"]
["AT1G25560","cyan","Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. Novel transcriptional regulator involved in ethylene signaling. Promoter bound by EIN3. EDF1 in turn, binds to promoter elements in ethylene responsive genes.","TEMPRANILLO 1 (TEM1)","TEMPRANILLO 1 (TEM1);ETHYLENE RESPONSE DNA BINDING FACTOR 1 (EDF1); (ATTEM1)"]
["AT3G47620","cyan","Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner. Modulates GA-dependent stamen filament elongation by direct activation of SAUR63 subfamily genes through conserved target sites in their promoters. Promotes together with TCP8, 7 and 15 endoreduplication-dependent cell expansion in leaf.","TEOSINTE BRANCHED, CYCLOIDEA AND PCF (TCP) 14 (TCP14)","TEOSINTE BRANCHED, CYCLOIDEA AND PCF (TCP) 14 (AtTCP14);TEOSINTE BRANCHED, CYCLOIDEA AND PCF (TCP) 14 (TCP14)"]
["AT1G33750","cyan","Sesterterpene synthase which produces various sesterpne backbones bia type-A cyclization mechanism.","TERPENE SYNTHASE 22 (TPS22)","TERPENE SYNTHASE 22 (TPS22)"]
["AT1G31950","cyan","Sesterterpene synthase which produces various sesterpene backbones via type-A cyclization mechanism.","TERPENE SYNTHASE 29 (TPS29)","TERPENE SYNTHASE 29 (TPS29)"]
["AT1G04190","cyan","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","TETRATRICOPEPTIDE REPEAT 3 (TPR3)","TETRATRICOPEPTIDE REPEAT 3 (TPR3)"]
["AT1G43560","cyan","thioredoxin Y2;(source:Araport11)","THIOREDOXIN Y2 (ty2)","THIOREDOXIN Y2 (ty2);THIOREDOXIN Y2 (Aty2)"]
["AT1G72810","cyan","Pyridoxal-5-phosphate-dependent enzyme family protein;(source:Araport11)","THREONINE SYNTHASE 2 (TSY2)","THREONINE SYNTHASE 2 (TSY2)"]
["AT5G53490","cyan","thylakoid lumenal 17.4 kDa protein, chloroplast, identical to SP:P81760 Thylakoid lumenal 17.4 kDa protein, chloroplast precursor (P17.4) {Arabidopsis thaliana}. Putative pentapeptide protein.","THYLAKOID LUMENAL 17.4 KDA PROTEIN (TL17)","THYLAKOID LUMENAL 17.4 KDA PROTEIN (TL17)"]
["AT4G27800","cyan","Choroplast protein phosphatase TAP38/PPH1 is required for efficient dephosphorylation of the LHCII anthena and state transition from state 2 to state 1.","THYLAKOID-ASSOCIATED PHOSPHATASE 38 (TAP38)","THYLAKOID-ASSOCIATED PHOSPHATASE 38 (TAP38);PROTEIN PHOSPHATASE 1 (PPH1)"]
["AT3G07800","cyan","Encodes a thymidine kinase that salvages DNA precursors.","THYMIDINE KINASE 1A (TK1A)","THYMIDINE KINASE 1A (TK1A); (ATTK1A); (TK1)"]
["AT2G16370","cyan","Encodes a bifunctional dihydrofolate reductase - thymidylate synthase gene. This is unique in Arabidopsis and protozoa. Other organisms have independent genes for this function. This alternative transcript is produced in tissues other than leaves.","DIHYDROFOLATE REDUCTASE THYMIDYLATE SYNTHASE 1 (DHFR-TS-1)","THYMIDYLATE SYNTHASE 1 (THY-1); (ATDRTS1);DIHYDROFOLATE REDUCTASE THYMIDYLATE SYNTHASE 1 (DHFR-TS-1)"]
["AT1G72940","cyan","Nucleotide-binding, leucine-rich repeat (NLR) gene regulated by nonsense-mediated mRNA decay (NMD) genes UPF1 and UPF3.","TIR-NBS11 (TN11)","TIR-NBS11 (TN11)"]
["AT4G21790","cyan","encodes a host factor that is required for TMV virus multiplication. The mRNA is cell-to-cell mobile.","TOBAMOVIRUS MULTIPLICATION 1 (TOM1)","TOBAMOVIRUS MULTIPLICATION 1 (TOM1); (ATTOM1)"]
["AT5G47560","cyan","Encodes a tonoplast malate/fumarate transporter.","TONOPLAST DICARBOXYLATE TRANSPORTER (TDT)","TONOPLAST DICARBOXYLATE TRANSPORTER (ATTDT);TONOPLAST DICARBOXYLATE TRANSPORTER (TDT); (ATSDAT)"]
["AT3G26520","cyan","gamma tonoplast intrinsic protein 2 (TIP2). expressed throughout the plant and transcript level is increased upon NaCl or ABA treatments. NaCl stress-sensitive yeast mutant strains exhibit more resistance to salt when expressing this protein.","TONOPLAST INTRINSIC PROTEIN 2 (TIP2)","TONOPLAST INTRINSIC PROTEIN 2 (TIP2);SALT-STRESS INDUCIBLE TONOPLAST INTRINSIC PROTEIN (SITIP); (GAMMA-TIP2); (TIP1;2)"]
["AT2G41100","cyan","encodes a calmodulin-like protein, with six potential calcium binding domains. Calcium binding shown by Ca(2+)-specific shift in electrophoretic mobility. Expression induced by touch and darkness. Expression may also be developmentally controlled. Expression in growing regions of roots, vascular tissue, root/shoot junctions, trichomes, branch points of the shoot, and regions of siliques and flowers. The mRNA is cell-to-cell mobile.","TOUCH 3 (TCH3)","TOUCH 3 (TCH3);ARABIDOPSIS THALIANA CALMODULIN LIKE 4 (ATCAL4);CALMODULIN-LIKE 12 (CML12)"]
["AT5G26290","cyan","MATH domain containing TRAF-like protein. Mutants show defects in both male and female gametophyte development.Potentially regulated by siRNA/miRNA as a number of siRNA's map to the locus as well as miR777.","TRAF MEDIATED GAMETOGENESIS PROGRESSION (RAMGAP)","TRAF MEDIATED GAMETOGENESIS PROGRESSION (RAMGAP)"]
["AT3G16640","cyan","Encodes a protein homologous to translationally controlled tumor protein (TCTP) from Drosophila. In flies, TCTP functions guanine nucleotide exchange factor in the TOR signaling pathway. TCTP is expressed throughout the plant with highest levels seen in meristematic regions of the shoot and root. Loss of function alleles are not transmitted through the male gametophyte due to defects in pollen tube growth. Hypomorphs, generated through RNAi, are dwarf and have smaller cells. These plants also have defects in lateral and primary root growth as well as root hair growth. The phenotypes are similar to TOR mutants suggesting that TCTP functions in the is pathway in Arabidopsis as well.","TRANSLATIONALLY CONTROLLED TUMOR PROTEIN (TCTP1)","TRANSLATIONALLY CONTROLLED TUMOR PROTEIN (TCTP1); (AtTCTP1)"]
["AT1G72750","cyan","translocase inner membrane subunit 23-2;(source:Araport11)","TRANSLOCASE INNER MEMBRANE SUBUNIT 23-2 (TIM23-2)","TRANSLOCASE INNER MEMBRANE SUBUNIT 23-2 (ATTIM23-2);TRANSLOCASE INNER MEMBRANE SUBUNIT 23-2 (TIM23-2)"]
["AT3G46560","cyan","Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus. Together with AtTIM10, AtTIM9 is non-redundantly essential for maintaining mitochondrial function of early embryo proper cells and endosperm free-nuclei.","TRANSLOCASE OF THE INNER MEMBRANE 9 (TIM9)","TRANSLOCASE OF THE INNER MEMBRANE 9 (TIM9);EMBRYO DEFECTIVE 2474 (emb2474); (ATTIM9)"]
["AT1G49410","cyan","translocase of the outer mitochondrial membrane 6;(source:Araport11)","TRANSLOCASE OF THE OUTER MITOCHONDRIAL MEMBRANE 6 (TOM6)","TRANSLOCASE OF THE OUTER MITOCHONDRIAL MEMBRANE 6 (TOM6)"]
["AT2G15290","cyan","Encodes a protein located in the chloroplast inner envelope. The study of mutant defective in the gene product suggests that the protein is involved in the translocation of protein across the envelope membrane into the chloroplast stroma.","TRANSLOCON AT INNER MEMBRANE OF CHLOROPLASTS 21 (TIC21)","TRANSLOCON AT INNER MEMBRANE OF CHLOROPLASTS 21 (ATTIC21);TRANSLOCON AT INNER MEMBRANE OF CHLOROPLASTS 21 (TIC21);CHLOROPLAST IMPORT APPARATUS 5 (CIA5);PERMEASE IN CHLOROPLASTS 1 (PIC1)"]
["AT1G04940","cyan","Tic20 is believed to function as a component of the protein-conducting channel at the inner envelope membrane. Genes AT1G04940 and AT1G04945 were switched for the TAIR7 genome release to give consistency with MIPs annotation. The Arabidopsis genome encodes four Tic20 homologous proteins, AT1G04940(Tic20-I), AT2G47840(Tic20-II), AT4G03320(Tic20-IV) and AT5G55710(Tic20-V).","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-I (Tic20-I)","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-I (Tic20-I);TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20 (TIC20);TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20 (atTIC20);TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-I (AtTic20-I)"]
["AT5G55710","cyan","Encodes a component of the TIC (translocon at the inner envelope membrane of chloroplasts) protein translocation machinery mediating the protein translocation across the inner envelope of plastids. The Arabidopsis genome encodes four Tic20 homologous proteins, AT1G04940(Tic20-I), AT2G47840(Tic20-II), AT4G03320(Tic20-IV) and AT5G55710(Tic20-V).","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-V (Tic20-V)","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-V (AtTic20-V);TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-V (Tic20-V)"]
["AT5G01590","cyan","histone-lysine N-methyltransferase ATXR3-like protein;(source:Araport11)","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 56 (TIC56)","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 56 (TIC56)"]
["AT1G66150","cyan","Receptor-like transmembrane kinase I (TMK1); key regulator in auxin signaling. High auxin and TMK1 play essential and positive roles in ABA signaling through regulating ABA INSENSITIVE 1 and 2 (ABI1/2). Inhibits the phosphatase activity of ABI2 by direct phosphorylation of threonine 321 (T321), a conserved phosphorylation site in ABI2 proteins, whose phosphorylation status is important for both auxin and ABA responses.","TRANSMEMBRANE KINASE 1 (TMK1)","TRANSMEMBRANE KINASE 1 (TMK1)"]
["AT5G58220","cyan","Encodes a transthyretin-like S-allantoin synthase protein that catalyzes two steps in the allantoin biosynthesis pathway by acting as a hydroxyisourate hydrolase and a 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) decarboxylase. Two alternatively spliced versions of the transcript give rise to a longer peroxisomally-targeted protein (AT5G58220.1 (called TTL1-)) and a slightly shorter cytoplasmic protein (AT5G58220.3 (called TTL2-)). Both have roughly equivalent enzymatic activity in vitro, but, allantoin biosynthesis is believed to occur in the peroxisome suggesting that the cytosolic form may participate in a different process.","TRANSTHYRETIN-LIKE PROTEIN (TTL)","TRANSTHYRETIN-LIKE PROTEIN (TTL);ALLANTOIN SYNTHASE (ALNS)"]
["AT5G10100","cyan","Trehalose-6-phosphate phosphatase which enhances drought tolerance by regulating stomatal apertures.","TREHALOSE-6-PHOSPHATE PHOSPHATASE I (TPPI)","TREHALOSE-6-PHOSPHATE PHOSPHATASE I (TPPI)"]
["AT2G42570","cyan","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","TRICHOME BIREFRINGENCE-LIKE 39 (TBL39)","TRICHOME BIREFRINGENCE-LIKE 39 (TBL39)"]
["AT3G20320","cyan","Encodes a permease-like component of an ABC transporter involved in lipid transfer from ER to chloroplast. A phosphatidic acid-binding protein with a predicted mycobacterial cell entry domain. It is tethered to the inner chloroplast envelope membrane facing the outer envelope membrane. Presumed bacterial orthologs of TGD1 and TGD2 in Gram-negative bacteria are typically organized in transcriptional units, suggesting their involvement in a common biological process. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.","ATP-BINDING CASSETTE I15 (ABCI15)","TRIGALACTOSYLDIACYLGLYCEROL2 (TGD2);ATP-BINDING CASSETTE I15 (ABCI15)"]
["AT3G56330","cyan","Involved in posttranscriptional modification of plastid tRNA.","TRNA METHYLTRANSFERASE 1C (TRM1C)","TRNA METHYLTRANSFERASE 1C (TRM1C); (ATTRM1C)"]
["AT1G03110","cyan","Encodes a gene involved in the modification of nucleosides in tRNA. Mutants have no 7-methylguanosine.","TRNA MODIFICATION 82 (TRM82)","TRNA MODIFICATION 82 (TRM82); (AtTRM82)"]
["AT3G54640","cyan","Catalyzes the conversion of indole-3-glycerolphosphate to indole, the penultimate reaction in the biosynthesis of tryptophan. Functions as a heterocomplex with tryptophan synthase beta subunit (TSA2).","TRYPTOPHAN SYNTHASE ALPHA CHAIN (TSA1)","TRYPTOPHAN-REQUIRING 3 (TRP3);TRYPTOPHAN SYNTHASE ALPHA CHAIN (TSA1)"]
["AT3G27060","cyan","Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes. TSO2 transcription occurs predominantly at the S-phase of the cell cycle and its expression pattern is consistent with its role in dNDP biosynthesis during DNA replication in actively dividing cells. Critical for cell cycle progression, DNA damage repair and plant development.","TSO MEANING 'UGLY' IN CHINESE 2 (TSO2)","TSO MEANING 'UGLY' IN CHINESE 2 (TSO2); (ATTSO2)"]
["AT2G18280","cyan","Member of TLP family The mRNA is cell-to-cell mobile.","TUBBY LIKE PROTEIN 2 (TLP2)","TUBBY LIKE PROTEIN 2 (TLP2);TUBBY LIKE PROTEIN 2 (AtTLP2)"]
["AT5G19770","cyan","tubulin 3","TUBULIN ALPHA-3 (TUA3)","TUBULIN ALPHA-3 (TUA3)"]
["AT5G19780","cyan","Encodes an isoform of alpha tubulin. Closely related to adjacent gene TUA3 suggesting recent duplication. The mRNA is cell-to-cell mobile.","TUBULIN ALPHA-5 (TUA5)","TUBULIN ALPHA-5 (TUA5)"]
["AT1G75780","cyan","beta tubulin gene downregulated by phytochrome A (phyA)-mediated far-red light high-irradiance and the phytochrome B (phyB)-mediated red light high-irradiance responses","TUBULIN BETA-1 CHAIN (TUB1)","TUBULIN BETA-1 CHAIN (TUB1)"]
["AT1G20010","cyan","beta tubulin","TUBULIN BETA-5 CHAIN (TUB5)","TUBULIN BETA-5 CHAIN (TUB5)"]
["AT4G20890","cyan","tubulin 9 The mRNA is cell-to-cell mobile.","TUBULIN BETA-9 CHAIN (TUB9)","TUBULIN BETA-9 CHAIN (TUB9)"]
["AT3G62250","cyan","ubiquitin 5;(source:Araport11)","UBIQUITIN 5 (UBQ5)","UBIQUITIN 5 (UBQ5);RIBOSOMAL PROTEIN ES31X (ES31X)"]
["AT2G47110","cyan","polyubiquitin gene The mRNA is cell-to-cell mobile.","UBIQUITIN 6 (UBQ6)","UBIQUITIN 6 (UBQ6);UBIQUITIN EXTENSION PROTEIN 6 (UBI6);RIBOSOMAL PROTEIN S27AB (RPS27AB);RIBOSOMAL PROTEIN ES31Y (ES31Y)"]
["AT2G36170","cyan","60S ribosomal protein L40-1;(source:Araport11)","UBIQUITIN EXTENSION PROTEIN 2 (UBQ2)","UBIQUITIN EXTENSION PROTEIN 2 (UBQ2);60S RIBOSOMAL PROTEIN L40 A (RPL40A);RIBOSOMAL PROTEIN EL40Z (EL40Z)"]
["AT1G50490","cyan","Encodes one of two ubiquitin-conjugating enzymes belonging to the E2-C gene family (the other being UBC19). Transcript is always found in diving cells, but also in other non-dividing cells.","UBIQUITIN-CONJUGATING ENZYME 20 (UBC20)","UBIQUITIN-CONJUGATING ENZYME 20 (UBC20)"]
["AT1G15500","cyan","TLC ATP/ADP transporter;(source:Araport11)","(ATNTT2)","UCLEOTIDE TRANSPORTER 2 (NTT2); (ATNTT2)"]
["AT5G39320","cyan","UDP-glucose 6-dehydrogenase family protein;(source:Araport11)","UDP-GLUCOSE DEHYDROGENASE 4 (UDG4)","UDP-GLUCOSE DEHYDROGENASE 4 (UDG4)"]
["AT2G15480","cyan","UDP-glucosyl transferase 73B5;(source:Araport11)","UDP-GLUCOSYL TRANSFERASE 73B5 (UGT73B5)","UDP-GLUCOSYL TRANSFERASE 73B5 (UGT73B5)"]
["AT5G05890","cyan","Encodes a nicotinate-N-glycosyltransferase.","UDP-GLUCOSYL TRANSFERASE 76C5 (UGT76C5)","UDP-GLUCOSYL TRANSFERASE 76C5 (UGT76C5)"]
["AT2G15490","cyan","UDP-glycosyltransferase 73B4;(source:Araport11)","UDP-GLYCOSYLTRANSFERASE 73B4 (UGT73B4)","UDP-GLYCOSYLTRANSFERASE 73B4 (UGT73B4)"]
["AT4G13560","cyan","Late embryogenesis abundant protein (LEA) family protein;(source:Araport11)","UNFERTILIZED EMBRYO SAC 15 (UNE15)","UNFERTILIZED EMBRYO SAC 15 (UNE15);NAD-DEPENDENT MALIC ENZYME 1 (NAD-ME1)"]
["AT3G53900","cyan","Encodes UPP, a plastidial uracil phosphoribosyltransferase (UPRT) involved in uracil salvage. Loss-of-function mutation causes dramatic growth retardation, a pale-green to albino phenotype, abnormal root morphology and chloroplastic disorders.","URACIL PHOSPHORIBOSYLTRANSFERASE (UPP)","URACIL PHOSPHORIBOSYLTRANSFERASE (UPP);PYRIMIDINE R (PYRR)"]
["AT2G34470","cyan","Encodes a urease accessory protein which is essential for the activation of plant urease.","UREASE ACCESSORY PROTEIN G (UREG)","UREASE ACCESSORY PROTEIN G (UREG); (PSKF109)"]
["AT3G28130","cyan","nodulin MtN21-like transporter family protein","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 44 (UMAMIT44)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 44 (UMAMIT44)"]
["AT3G15620","cyan","Required for photorepair of 6-4 photoproducts in Arabidopsis thaliana.","UV REPAIR DEFECTIVE 3 (UVR3)","UV REPAIR DEFECTIVE 3 (UVR3)"]
["AT1G78900","cyan","Encodes catalytic subunit A of the vacuolar ATP synthase. Mutants are devoid of vacuolar ATPase activity as subunit A is encoded only by this gene and show strong defects in male gametophyte development and in Golgi stack morphology. The mRNA is cell-to-cell mobile.","VACUOLAR ATP SYNTHASE SUBUNIT A (VHA-A)","VACUOLAR ATP SYNTHASE SUBUNIT A (VHA-A)"]
["AT4G11150","cyan","Encodes a vacuolar H+-ATPase subunit E isoform 1 which is required for Golgi organization and vacuole function in embryogenesis. The mRNA is cell-to-cell mobile.","VACUOLAR ATP SYNTHASE SUBUNIT E1 (TUF)","VACUOLAR ATP SYNTHASE SUBUNIT E1 (TUF);EMBRYO DEFECTIVE 2448 (emb2448); (TUFF); (VHA-E1); (VHAE1)"]
["AT3G61770","cyan","Acid phosphatase/vanadium-dependent haloperoxidase-related protein;(source:Araport11)",null,"VACUOLAR PROTEIN SORTING 30 (VPS30)"]
["AT4G38510","cyan","One of three genes encoding the vacuolar ATP synthase subunit B1. The protein binds to and co-localizes with F-actin, bundles F-actin to form higher-order structure, and stabilizes actin filaments in vitro.","V-ATPASE B SUBUNIT 2 (VAB2)","V-ATPASE B SUBUNIT 2 (VAB2); (ATVAB2)"]
["AT3G27740","cyan","Encodes carbamoyl phosphate synthetase (CPS) small subunit (carA), also named as VEN6. Heterologous expression of the Arabidopsis VEN3 and VEN6 genes in a CPS-deficient Escherichia coli strain fully restored bacterial growth in minimal medium, demonstrating the enzymatic activity of the VEN3 and VEN6 proteins.","CARBAMOYL PHOSPHATE SYNTHETASE A (CARA)","VENOSA 6 (VEN6);CARBAMOYL PHOSPHATE SYNTHETASE A (CARA)"]
["AT1G64970","cyan","gamma-tocopherol methyltransferase (g-TMT) mRNA, nuclear; mutant has Deficient in alpha and beta tocopherol; Accumulates gamma tocopherol in leaves","GAMMA-TOCOPHEROL METHYLTRANSFERASE (G-TMT)","VITAMIN E DEFICIENT 4 (VTE4); (TMT1);GAMMA-TOCOPHEROL METHYLTRANSFERASE (G-TMT)"]
["AT3G01280","cyan","Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. The mRNA is cell-to-cell mobile.","VOLTAGE DEPENDENT ANION CHANNEL 1 (VDAC1)","VOLTAGE DEPENDENT ANION CHANNEL 1 (VDAC1);ARABIDOPSIS THALIANA VOLTAGE DEPENDENT ANION CHANNEL 1 (ATVDAC1)"]
["AT5G65683","cyan","Zinc finger (C3HC4-type RING finger) family protein;(source:Araport11)","WAV3 HOMOLOG 2 (WAVH2)","WAV3 HOMOLOG 2 (WAVH2)"]
["AT1G70950","cyan","Microtubule-stabilizing protein. Module with MREL57 regulates microtubule disassembly to mediate stomatal closure in response to drought stress and ABA treatment. MREL57 interacts with, ubiquitinates and degrades WDL7, effect is enhanced by ABA.","WAVE DAMPENED 7 (WDL7)","WAVE DAMPENED 7 (WDL7)"]
["AT1G56510","cyan","TIR-NB-LRR protein that confers resistance to four races of Albugo candida. The mRNA is cell-to-cell mobile.","WHITE RUST RESISTANCE 4 (WRR4)","WHITE RUST RESISTANCE 4 (WRR4);ACTIVATED DISEASE RESISTANCE 2 (ADR2);WHITE RUST RESISTANCE 4 A (WRR4A)"]
["AT1G29280","cyan","member of WRKY Transcription Factor; Group II-e The mRNA is cell-to-cell mobile.","WRKY DNA-BINDING PROTEIN 65 (WRKY65)","WRKY DNA-BINDING PROTEIN 65 (WRKY65);WRKY DNA-BINDING PROTEIN 65 (ATWRKY65);ABNORMAL 33 THERMOMORPHOGENESIS 3 (ABT3)"]
["AT4G24240","cyan","Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family.","WRKY DNA-BINDING PROTEIN 7 (WRKY7)","WRKY DNA-BINDING PROTEIN 7 (WRKY7); (ATWRKY7)"]
["AT1G09850","cyan","Arabidopsis thaliana papain-like cysteine peptidase","XYLEM BARK CYSTEINE PEPTIDASE 3 (XBCP3)","XYLEM BARK CYSTEINE PEPTIDASE 3 (XBCP3)"]
["AT4G30290","cyan","Encodes a xyloglucan endotransglucosylase/hydrolase with only only the endotransglucosylase (XET; EC 2.4.1.207) activity towards xyloglucan and non-detectable endohydrolytic (XEH; EC 3.2.1.151) activity. Expressed throughout both the main and the lateral root, with intensive expression at the dividing and elongating regions. Is expressed in lateral root primordia but expression ceases after lateral root begins to grow. Involved in cell proliferation in incised inflorescence stems.","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19 (XTH19)","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19 (ATXTH19);XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 19 (XTH19)"]
["AT5G13870","cyan","EXGT-A4, endoxyloglucan transferase,","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 5 (XTH5)","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 5 (XTH5);ENDOXYLOGLUCAN TRANSFERASE A4 (EXGT-A4)"]
["AT4G03210","cyan","Encodes a member of xyloglucan endotransglucosylase/hydrolases (XTHs) that catalyze the cleavage and molecular grafting of xyloglucan chains function in loosening and rearrangement of the cell wall. Gene is expressed in shoot apex region, flower buds, flower stalks and internodes bearing flowers.","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9 (XTH9)","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9 (XTH9)"]
["AT3G44990","cyan","Encodes a xyloglucan endotransglycosylase/hydrolase. Protein sequence and phylogenetic analysis indicates that this enzyme resides in Group III-A of the XTH family, with high similarity to Tropaeolum majus (nasturtium) xyloglucanase 1 (TmNXG1).Enzyme kinetic analysis indicates predominant xyloglucan endo-hydrolase activity (EC 3.2.1.151) with only limited potential to act as a xyloglucan endo-transglycosylase (EC 2.4.1.207). Potential heat-priming associated target of ATAF1.","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31 (XTH31)","XYLOGLUCAN ENDO-TRANSGLYCOSYLASE-RELATED 8 (XTR8); (ATXTR8);XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 31 (XTH31); (ATXTH31)"]
["AT5G17630","cyan","Phosphate translocator family member which resides in the plastid inner envelope membrane. Retrieves excessive pentose phosphates from the extra-plastidial space and makes them available to the plastids.","XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR (XPT)","XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR (XPT)"]
["AT2G21370","cyan","Although this gene has a sequence similar to xylulose kinases, several lines of experimental evidence suggest that it does not act on xylulose or deoxy-xylulose.","XYLULOSE KINASE-1 (XK-1)","XYLULOSE KINASE-1 (XK-1);XYLULOSE KINASE 1 (XK1)"]
["AT1G55910","cyan","member of Putative zinc transporter ZIP2 - like family","ZINC TRANSPORTER 11 PRECURSOR (ZIP11)","ZINC TRANSPORTER 11 PRECURSOR (ZIP11)"]
["AT3G25210","green","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G61430","green","S-locus lectin protein kinase family protein;(source:Araport11)"]
["AT4G00090","green","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT5G21940","green","hybrid signal transduction histidine kinase M-like protein;(source:Araport11)"]
["AT1G14470","green","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G56470","green","pseudogene of Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11)"]
["AT3G07300","green","NagB/RpiA/CoA transferase-like superfamily protein;(source:Araport11)"]
["AT1G17665","green","CA-responsive protein;(source:Araport11)"]
["AT3G19630","green","Radical SAM superfamily protein;(source:Araport11)"]
["AT5G37352","green","Pseudogene of AT2G25010"]
["AT2G48100","green","Exonuclease family protein;(source:Araport11)"]
["AT3G02160","green","Bromodomain transcription factor;(source:Araport11)"]
["AT1G17147","green","VQ motif-containing protein;(source:Araport11)"]
["AT4G24880","green","snurportin-1 protein;(source:Araport11)"]
["AT1G07470","green","Transcription factor IIA, alpha/beta subunit;(source:Araport11)"]
["AT2G22720","green","SPT2 chromatin protein;(source:Araport11)"]
["AT4G26620","green","Sucrase/ferredoxin-like family protein;(source:Araport11)"]
["AT4G31140","green","O-Glycosyl hydrolases family 17 protein;(source:Araport11)"]
["AT1G65280","green","DNAJ heat shock N-terminal domain-containing protein;(source:Araport11)"]
["AT3G24110","green","Calcium-binding EF-hand family protein;(source:Araport11)"]
["AT5G25270","green","Ubiquitin-like superfamily protein;(source:Araport11)"]
["AT1G70510","green","A member of class I knotted1-like homeobox gene family (together with KNAT1). Similar to the knotted1 (kn1) homeobox gene of maize. KNAT2 acts synergistically with cytokinins and antagonistically with ethylene based on ectopic expression studies in different mutant backgrounds and hormone treatments. In addition, KNAT2 is negatively regulated by AS and YABBY genes. KNAT2 is strongly expressed in the shoot apex of seedlings, while in mature plants the gene is primarily expressed in flowers and inflorescence stems."]
["AT4G28652","green","Natural antisense transcript overlaps with AT4G28650;(source:Araport11)"]
["AT5G17370","green","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT5G19221","green","Natural antisense transcript overlaps with AT5G19220;(source:Araport11)"]
["AT5G09395","green","Natural antisense transcript overlaps with AT5G65550;(source:Araport11)"]
["AT3G15450","green","aluminum induced protein with YGL and LRDR motifs;(source:Araport11)"]
["AT1G15125","green","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT3G45660","green","Encodes a member of the NAXT NPF subfamily."]
["AT1G07480","green","Transcription factor IIA, alpha/beta subunit;(source:Araport11)"]
["AT5G11760","green","stress response protein;(source:Araport11)"]
["AT2G29310","green","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT5G19950","green","tudor domain protein (DUF1767);(source:Araport11)"]
["AT5G49220","green","hypothetical protein (DUF789);(source:Araport11)"]
["AT3G47890","green","Ubiquitin carboxyl-terminal hydrolase-related protein;(source:Araport11)"]
["AT1G51520","green","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT4G12710","green","ARM repeat superfamily protein;(source:Araport11)"]
["AT2G13840","green","Polymerase/histidinol phosphatase-like protein;(source:Araport11)"]
["AT5G07885","green","Natural antisense transcript overlaps with AT5G52100;(source:Araport11)"]
["AT1G80930","green","MIF4G domain-containing protein / MA3 domain-containing protein;(source:Araport11)"]
["AT2G34970","green","Trimeric LpxA-like enzyme;(source:Araport11)"]
["AT2G43200","green","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT5G13565","green","hypothetical protein;(source:Araport11)"]
["AT1G33290","green","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT5G41970","green","Metal-dependent protein hydrolase;(source:Araport11)"]
["AT1G80630","green","RNI-like superfamily protein;(source:Araport11)"]
["AT5G61330","green","rRNA processing protein-like protein;(source:Araport11)"]
["AT1G20460","green","NADH-ubiquinone oxidoreductase chain;(source:Araport11)"]
["AT1G09487","green","Natural antisense transcript overlaps with AT1G74550;(source:Araport11)"]
["AT1G07300","green","josephin protein-like protein;(source:Araport11)"]
["AT2G35040","green","AICARFT/IMPCHase bienzyme family protein;(source:Araport11)"]
["AT1G29370","green","RNA polymerase II degradation factor-like protein (DUF1296);(source:Araport11)"]
["AT4G19191","green","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT4G19190","green","zinc knuckle (CCHC-type) family protein;(source:Araport11)"]
["AT3G26395","green","hypothetical protein;(source:Araport11)"]
["AT5G49530","green","SIN-like family protein;(source:Araport11)"]
["AT1G49032","green","hypothetical protein;(source:Araport11)"]
["AT2G36930","green","zinc finger (C2H2 type) family protein;(source:Araport11)"]
["AT1G07728","green","Natural antisense transcript overlaps with AT1G07725;(source:Araport11)"]
["AT2G21090","green","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)"]
["AT2G46200","green","U11/U12 small nuclear ribonucleoprotein;(source:Araport11)"]
["AT1G33050","green","hypothetical protein;(source:Araport11)"]
["AT5G42825","green","hypothetical protein;(source:Araport11)"]
["AT4G11550","green","Cysteine/Histidine-rich C1 domain family protein;(source:Araport11)"]
["AT3G22430","green","RNA recognition motif XS domain protein;(source:Araport11)"]
["AT3G58770","green","hypothetical protein;(source:Araport11)"]
["AT3G59800","green","stress response protein;(source:Araport11)"]
["AT5G11290","green","transmembrane protein, putative (DUF247);(source:Araport11)"]
["AT1G73090","green","WD repeat protein;(source:Araport11)"]
["AT4G32480","green","Phosphorus (P) stress-inducible DUF506 gene family member"]
["AT5G16960","green","Zinc-binding dehydrogenase family protein;(source:Araport11)"]
["AT2G19920","green","RNA-dependent RNA polymerase family protein;(source:Araport11)"]
["AT5G42830","green","HXXXD-type acyl-transferase family protein;(source:Araport11)"]
["AT3G48790","green","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11)"]
["AT1G04953","green","Natural antisense transcript overlaps with AT1G12480;(source:Araport11)"]
["AT2G07734","green","Alpha-L RNA-binding motif/Ribosomal protein S4 family protein;(source:Araport11)"]
["AT4G27580","green","phosphatidylinositol transfer SFH5-like protein;(source:Araport11)"]
["AT5G66790","green","Protein kinase superfamily protein;(source:Araport11)"]
["AT5G24460","green","RING-H2 zinc finger protein;(source:Araport11)"]
["AT1G30320","green","Remorin family protein;(source:Araport11)"]
["AT1G27752","green","Ubiquitin system component Cue protein;(source:Araport11)"]
["AT5G01700","green","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT3G18530","green","ARM repeat superfamily protein;(source:Araport11)"]
["AT3G06355","green","None;(source:Araport11)"]
["AT1G49850","green","RING/U-box superfamily protein;(source:Araport11)"]
["AT2G20210","green","RNI-like superfamily protein;(source:Araport11)"]
["AT5G22480","green","ZPR1 zinc-finger domain protein;(source:Araport11)"]
["AT3G15290","green","3-hydroxyacyl-CoA dehydrogenase family protein;(source:Araport11)"]
["AT2G34750","green","RNA polymerase I specific transcription initiation factor RRN3 protein;(source:Araport11)"]
["AT2G31585","green","other_RNA;(source:Araport11)"]
["AT2G34030","green","Calcium-binding EF-hand family protein;(source:Araport11)"]
["AT3G10770","green","Single-stranded nucleic acid binding R3H protein;(source:Araport11)"]
["AT5G26865","green","AGAMOUS-like MADS-box protein;(source:Araport11)"]
["AT4G24860","green","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT1G04210","green","Encodes a putative Raf-related kinase."]
["AT1G77170","green","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G58530","green","RNI-like superfamily protein;(source:Araport11)"]
["AT4G22280","green","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT4G22285","green","Ubiquitin C-terminal hydrolases superfamily protein;(source:Araport11)"]
["AT5G49645","green","hypothetical protein;(source:Araport11)"]
["AT4G13860","green","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT1G61370","green","S-locus lectin protein kinase family protein;(source:Araport11)"]
["AT4G32050","green","neurochondrin family protein;(source:Araport11)"]
["AT3G14010","green","hydroxyproline-rich glycoprotein family protein, similar to Mrs16p (GI:2737884) (Saccharomyces cerevisiae); weak similarity to ataxin-2 related protein (GI:1679686) (Homo sapiens). Included in a family of CTC interacting domain proteins found to interact with PAB2."]
["AT4G20330","green","Transcription initiation factor TFIIE, beta subunit;(source:Araport11)"]
["AT1G80060","green","Ubiquitin-like superfamily protein;(source:Araport11)"]
["AT2G26780","green","ARM repeat superfamily protein;(source:Araport11)"]
["AT1G71710","green","DNAse I-like superfamily protein;(source:Araport11)"]
["AT3G16120","green","Dynein light chain type 1 family protein;(source:Araport11)"]
["AT5G05750","green","DNAJ heat shock N-terminal domain-containing protein;(source:Araport11)"]
["AT4G33930","green","Encodes a protein with 14.6% glycine residues, similar to hyphally regulated protein from Candida albicans, PIR2:S58135"]
["AT1G74330","green","Protein kinase superfamily protein;(source:Araport11)"]
["AT3G60040","green","F-box family protein;(source:Araport11)"]
["AT4G37480","green","Chaperone DnaJ-domain superfamily protein;(source:Araport11)"]
["AT5G05130","green","DNA/RNA helicase protein;(source:Araport11)"]
["AT4G15240","green","glycosyltransferase (DUF604);(source:Araport11)"]
["AT3G26240","green","Cysteine/Histidine-rich C1 domain family protein. Accumulation of this protein is regulated by a cis-Natural Antisense RNA (cis-NAT)."]
["AT2G11891","green","hypothetical protein;(source:Araport11)"]
["AT5G44320","green","Eukaryotic translation initiation factor 3 subunit 7 (eIF-3);(source:Araport11)"]
["AT5G03858","green","Pseudogene of AT5G03960; IQD12 (IQ-domain 12); calmodulin binding protein"]
["AT1G56290","green","CwfJ-like family protein;(source:Araport11)"]
["AT4G28830","green","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT5G36930","green","Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11)"]
["AT2G19270","green","mitotic checkpoint protein PRCC-carboxy-term protein;(source:Araport11)"]
["AT5G36210","green","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT2G37480","green","hypothetical protein;(source:Araport11)"]
["AT1G48405","green","Kinase interacting (KIP1-like) family protein;(source:Araport11)"]
["AT5G55380","green","MBOAT (membrane bound O-acyl transferase) family protein;(source:Araport11)"]
["AT3G46600","green","GRAS family transcription factor;(source:Araport11)"]
["AT3G63320","green","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT1G64050","green","hypothetical protein;(source:Araport11)"]
["AT3G08943","green","ARM repeat superfamily protein;(source:Araport11)"]
["AT3G08947","green","ARM repeat superfamily protein;(source:Araport11)"]
["AT5G66720","green","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT1G05894","green","hypothetical protein;(source:Araport11)"]
["AT1G08710","green","F-box protein that is induced in roots by drought stress."]
["AT5G49400","green","zinc knuckle (CCHC-type) family protein;(source:Araport11)"]
["AT5G03560","green","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G14860","green","Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein;(source:Araport11)"]
["AT3G04184","green","hypothetical protein;(source:Araport11)"]
["AT1G06200","green","Peptidase S24/S26A/S26B/S26C family protein;(source:Araport11)"]
["AT5G19485","green","transferases/nucleotidyltransferase;(source:Araport11)"]
["AT3G55060","green","CAP-gly domain linker;(source:Araport11)"]
["AT5G23380","green","hypothetical protein (DUF789);(source:Araport11)"]
["AT3G10030","green","aspartate/glutamate/uridylate kinase family protein;(source:Araport11)"]
["AT1G68240","green","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)"]
["AT2G29340","green","NAD-dependent epimerase/dehydratase family protein;(source:Araport11)"]
["AT4G16180","green","transmembrane protein;(source:Araport11)"]
["AT5G22080","green","Chaperone DnaJ-domain superfamily protein;(source:Araport11)"]
["AT1G10610","green","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)"]
["AT3G16310","green","mitotic phosphoprotein N end (MPPN) family protein;(source:Araport11)"]
["AT3G51350","green","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT1G10450","green","Encodes SIN3-like 6, a homolog of the transcriptional repressor SIN3 (AT1G24190)."]
["AT2G24240","green","BTB/POZ domain with WD40/YVTN repeat-like protein;(source:Araport11)"]
["AT1G08610","green","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G36720","green","Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein;(source:Araport11)"]
["AT1G07740","green","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G07660","green","flocculation protein (DUF1296);(source:Araport11)"]
["AT4G02140","green","hypothetical protein;(source:Araport11)"]
["AT5G58410","green","HEAT/U-box domain-containing protein;(source:Araport11)"]
["AT3G47610","green","transcription regulator/ zinc ion binding protein;(source:Araport11)"]
["AT1G13640","green","Phosphatidylinositol 3- and 4-kinase family protein;(source:Araport11)"]
["AT5G10060","green","ENTH/VHS family protein;(source:Araport11)"]
["AT2G40340","green","Encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought."]
["AT4G34880","green","Amidase family protein;(source:Araport11)"]
["AT3G59000","green","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT4G33467","green","hypothetical protein;(source:Araport11)"]
["AT5G06755","green","hypothetical protein;(source:Araport11)"]
["AT1G11340","green","G-type lectin S-receptor-like Serine/Threonine-kinase;(source:Araport11)"]
["AT1G23460","green","Pectin lyase-like superfamily protein;(source:Araport11)"]
["AT1G22660","green","Polynucleotide adenylyltransferase family protein;(source:Araport11)"]
["AT5G64270","green","splicing factor;(source:Araport11)"]
["AT5G28740","green","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G23590","green","DNAJ heat shock N-terminal domain-containing protein;(source:Araport11)"]
["AT5G52170","green","Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family."]
["AT2G20950","green","phospholipase-like protein (PEARLI 4) family protein;(source:Araport11)"]
["AT4G16835","green","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT4G08220","green","transposable_element_gene;(source:Araport11);Mutator-like transposase family, has a 5.3e-67 P-value blast match to Q9SUF8 /145-308 Pfam PF03108 MuDR family transposase (MuDr-element domain);(source:TAIR10)"]
["AT1G76280","green","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G12950","green","Trypsin family protein;(source:Araport11)"]
["AT5G07950","green","hypothetical protein;(source:Araport11)"]
["AT1G75860","green","DNA ligase;(source:Araport11)"]
["AT4G03030","green","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT4G00695","green","Spc97/Spc98 family of spindle pole body (SBP) component;(source:Araport11)"]
["AT5G00875","green","Natural antisense transcript overlaps with AT5G02760;(source:Araport11)"]
["AT1G05147","green","Natural antisense transcript overlaps with AT1G15040;(source:Araport11)"]
["AT4G38090","green","ribosomal protein S5 domain protein;(source:Araport11)"]
["AT1G64540","green","F-box/FBD-like domains containing protein;(source:Araport11)"]
["AT5G02565","green","None;(source:Araport11)"]
["AT5G20600","green","ribosomal RNA processing-like protein;(source:Araport11)"]
["AT2G14878","green","other_RNA;(source:Araport11)"]
["AT2G08730","green","Natural antisense transcript overlaps with AT2G35420;(source:Araport11)"]
["AT5G48412","green","other_RNA;(source:Araport11)"]
["AT2G04860","green","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G42900","green","Plant basic secretory protein (BSP) family protein;(source:Araport11)"]
["AT3G07150","green","amino acid-ligase;(source:Araport11)"]
["AT5G63200","green","tetratricopeptide repeat (TPR)-containing protein;(source:Araport11)"]
["AT1G69400","green","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT5G44230","green","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT4G24440","green","transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S);(source:Araport11)"]
["AT5G03900","green","Iron-sulfur cluster biosynthesis family protein;(source:Araport11)"]
["AT1G02420","green","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G43900","green","Encodes a 5-inositol-phosphate phosphatase, that, in vitro, shows activity against IP(1,4,5)."]
["AT1G18700","green","DNAJ heat shock N-terminal domain-containing protein;(source:Araport11)"]
["AT5G12120","green","Ubiquitin-associated/translation elongation factor EF1B protein;(source:Araport11)"]
["AT1G13190","green","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT3G62455","green","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 7.1e-232 P-value blast match to gb|AAO73529.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family);(source:TAIR10)"]
["AT4G08960","green","phosphotyrosyl phosphatase activator (PTPA) family protein;(source:Araport11)"]
["AT5G47660","green","Homeodomain-like superfamily protein;(source:Araport11)"]
["AT3G42150","green","transmembrane protein;(source:Araport11)"]
["AT4G32510","green","HCO3- transporter family;(source:Araport11)"]
["AT3G26890","green","meiosis chromosome segregation family protein;(source:Araport11)"]
["AT2G33435","green","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT3G04615","green","Natural antisense transcript overlaps with AT3G24020;(source:Araport11)"]
["AT5G18255","green","Natural antisense transcript overlaps with AT5G18260;(source:Araport11)"]
["AT4G15260","green","UDP-Glycosyltransferase superfamily protein;(source:Araport11)"]
["AT3G25990","green","Homeodomain-like superfamily protein;(source:Araport11)"]
["AT1G04533","green","Natural antisense transcript overlaps with AT1G06923;(source:Araport11)"]
["AT5G51180","green","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT2G07725","green","Ribosomal L5P family protein;(source:Araport11)"]
["AT1G08230","green","Codes for a H+-driven, high affinity gamma-aminobutyric acid (GABA) transporter. Localized at the plasma membrane. In planta, AtGAT1 expression was highest in flowers and under conditions of elevated GABA concentrations such as wounding or senescence."]
["AT1G55820","green","lysine-specific demethylase, putative (DUF1296);(source:Araport11)"]
["AT5G51390","green","hypothetical protein;(source:Araport11)"]
["AT2G05215","green","None;(source:Araport11)"]
["AT1G27420","green","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT5G47430","green","DWNN domain, a CCHC-type zinc finger;(source:Araport11)"]
["AT1G06265","green","Natural antisense transcript overlaps with AT1G06260;(source:Araport11)"]
["AT2G43370","green","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT3G52570","green","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT2G01100","green","FAM133-like protein;(source:Araport11)"]
["AT5G05640","green","nucleoprotein-like protein;(source:Araport11)"]
["AT1G15330","green","Cystathionine beta-synthase (CBS) protein;(source:Araport11)"]
["AT3G59490","green","hypothetical protein;(source:Araport11)"]
["AT5G09225","green","transmembrane protein;(source:Araport11)"]
["AT3G26350","green","proline-rich receptor-like kinase;(source:Araport11)"]
["AT1G64820","green","MATE efflux family protein;(source:Araport11)"]
["AT1G73066","green","Leucine-rich repeat family protein;(source:Araport11)"]
["AT4G27130","green","Translation initiation factor SUI1 family protein;(source:Araport11)"]
["AT4G32610","green","copper ion binding protein;(source:Araport11)"]
["AT2G16586","green","transmembrane protein;(source:Araport11)"]
["AT5G25080","green","Sas10/Utp3/C1D family;(source:Araport11)"]
["AT3G57350","green","Nucleoporin interacting component (Nup93/Nic96-like) family protein;(source:Araport11)"]
["AT1G04707","green","Natural antisense transcript overlaps with AT1G09610;(source:Araport11)"]
["AT3G19740","green","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT5G15870","green","glycosyl hydrolase family 81 protein;(source:Araport11)"]
["AT1G72820","green","Mitochondrial substrate carrier family protein;(source:Araport11)"]
["AT2G43745","green","jacalin lectin-like protein;(source:Araport11)"]
["AT1G75140","green","membrane protein;(source:Araport11)"]
["AT1G51405","green","myosin-like protein;(source:Araport11)"]
["AT3G05250","green","RING/U-box superfamily protein;(source:Araport11)"]
["AT2G19572","green","Potential natural antisense gene, locus overlaps with AT2G19570"]
["AT4G16900","green","Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11)"]
["AT1G58060","green","RNA helicase family protein;(source:Araport11)"]
["AT1G09280","green","rhodanese-like domain protein;(source:Araport11)"]
["AT4G33480","green","BTB/POZ domain protein TNFAIP protein;(source:Araport11)"]
["AT5G21020","green","transmembrane protein;(source:Araport11)"]
["AT5G07340","green","Calreticulin family protein;(source:Araport11)"]
["AT1G43675","green","similarity to non-LTR retroelement protein"]
["AT2G46572","green","Natural antisense transcript overlaps with AT2G46570;(source:Araport11)"]
["AT1G75960","green","AMP-dependent synthetase and ligase family protein;(source:Araport11)"]
["AT3G07890","green","Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11)"]
["AT1G65032","green","COMPLEX 1 LYR-like protein;(source:Araport11)"]
["AT1G03510","green","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G41270","green","RNase P Rpr2/Rpp21 subunit domain protein;(source:Araport11)"]
["AT2G03470","green","ELM2 domain-containing protein;(source:Araport11)"]
["AT2G35390","green","Phosphoribosyltransferase family protein;(source:Araport11)"]
["AT5G13210","green","Uncharacterized conserved protein UCP015417, vWA;(source:Araport11)"]
["AT4G19880","green","Glutathione S-transferase family protein;(source:Araport11)"]
["AT5G14680","green","Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)"]
["AT5G46840","green","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT2G31820","green","Ankyrin repeat family protein;(source:Araport11)"]
["AT3G62010","green","metal ion-binding protein;(source:Araport11)"]
["AT5G44250","green","peptidase, S9A/B/C family, catalytic domain protein (Protein of unknown function DUF829, transmembrane 53);(source:Araport11)"]
["AT1G20120","green","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates."]
["AT2G07638","green","hypothetical protein;(source:Araport11)"]
["AT2G21430","green","Papain family cysteine protease;(source:Araport11)"]
["AT5G07790","green","hypothetical protein;(source:Araport11)"]
["AT3G07440","green","hypothetical protein;(source:Araport11)"]
["AT5G35370","green","S-locus lectin protein kinase family protein;(source:Araport11)"]
["AT3G12050","green","Aha1 domain-containing protein;(source:Araport11)"]
["AT1G14480","green","Ankyrin repeat family protein;(source:Araport11)"]
["AT1G68250","green","hypothetical protein;(source:Araport11)"]
["AT4G34332","green","Natural antisense transcript overlaps with AT4G34330;(source:Araport11)"]
["AT5G05220","green","hypothetical protein;(source:Araport11)"]
["AT2G23890","green","HAD-superfamily hydrolase, subfamily IG, 5-nucleotidase;(source:Araport11)"]
["AT1G04810","green","26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit;(source:Araport11)"]
["AT2G37362","green","Natural antisense transcript overlaps with AT2G37360;(source:Araport11)"]
["AT2G18850","green","SET domain-containing protein;(source:Araport11)"]
["AT5G09270","green","transmembrane protein;(source:Araport11)"]
["AT3G23255","green","tRNA dimethylallyltransferase;(source:Araport11)"]
["AT4G24320","green","Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11)"]
["AT1G27090","green","glycine-rich protein;(source:Araport11)"]
["AT3G62310","green","RNA helicase family protein;(source:Araport11)"]
["AT1G55800","green","hypothetical protein;(source:Araport11)"]
["AT3G06210","green","ARM repeat superfamily protein;(source:Araport11)"]
["AT3G57590","green","F-box and associated interaction domains-containing protein;(source:Araport11)"]
["AT4G23840","green","Leucine-rich repeat (LRR) family protein;(source:Araport11)"]
["AT1G19680","green","RING/U-box superfamily protein;(source:Araport11)"]
["AT4G30210","green","Encodes NADPH-cytochrome P450 reductase that catalyzes the first oxidative step of the phenylpropanoid general pathway.The mRNA is cell-to-cell mobile."]
["AT4G18465","green","RNA helicase family protein;(source:Araport11)"]
["AT1G09620","green","ATP binding/leucine-tRNA ligases/aminoacyl-tRNA ligase;(source:Araport11)"]
["AT2G32415","green","Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain-containing protein;(source:Araport11)"]
["AT5G06180","green","fission ELM1-like protein (DUF1022);(source:Araport11)"]
["AT3G26280","green","cytochrome P450 monooxygenase"]
["AT5G60700","green","glycosyltransferase family protein 2;(source:Araport11)"]
["AT3G06710","green","E3 ubiquitin ligase;(source:Araport11)"]
["AT1G69360","green","T-box transcription factor, putative (DUF863);(source:Araport11)"]
["AT5G25210","green","hypothetical protein;(source:Araport11)"]
["AT3G06325","green","Natural antisense transcript overlaps with AT3G41762;(source:Araport11)"]
["AT2G08660","green","Natural antisense transcript overlaps with AT2G34390;(source:Araport11)"]
["AT1G72060","green","serine-type endopeptidase inhibitor;(source:Araport11)"]
["AT2G07305","green","Natural antisense transcript overlaps with AT2G20500;(source:Araport11)"]
["AT1G23960","green","hypothetical protein (DUF626);(source:Araport11)"]
["AT5G11430","green","SPOC domain / Transcription elongation factor S-II protein;(source:Araport11)"]
["AT1G56090","green","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT4G36010","green","Pathogenesis-related thaumatin superfamily protein;(source:Araport11)"]
["AT5G22730","green","F-box/RNI-like/FBD-like domains-containing protein;(source:Araport11)"]
["AT1G74790","green","catalytics;(source:Araport11)"]
["AT1G29350","green","RNA polymerase II degradation factor-like protein (DUF1296);(source:Araport11)"]
["AT4G02880","green","ELKS/Rab6-interacting/CAST family protein;(source:Araport11)"]
["AT1G06590","green","anaphase-promoting complex subunit;(source:Araport11)"]
["AT3G23260","green","F-box and associated interaction domains-containing protein;(source:Araport11)"]
["AT3G27390","green","transmembrane protein;(source:Araport11)"]
["AT3G06455","green","ubiquitin family protein;(source:Araport11)"]
["AT5G10190","green","Major facilitator superfamily protein;(source:Araport11)"]
["AT4G02715","green","flocculation FLO11-like protein;(source:Araport11)"]
["AT3G27520","green","cryptic loci regulator;(source:Araport11)"]
["AT2G13440","green","glucose-inhibited division family A protein;(source:Araport11)"]
["AT2G43210","green","Ubiquitin-like superfamily protein;(source:Araport11)"]
["AT1G11303","green","G-type lectin S-receptor-like Serine/Threonine-kinase;(source:Araport11)"]
["AT1G06650","green","encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase The mRNA is cell-to-cell mobile."]
["AT4G23860","green","PHD finger protein-like protein;(source:Araport11)"]
["AT4G04692","green","pseudogene of expressed protein;(source:Araport11)"]
["AT2G01008","green","maternal effect embryo arrest protein;(source:Araport11)"]
["AT3G26040","green","HXXXD-type acyl-transferase family protein;(source:Araport11)"]
["AT2G28480","green","RNA-binding CRS1 / YhbY (CRM) domain protein;(source:Araport11)"]
["AT2G18680","green","transmembrane protein;(source:Araport11)"]
["AT4G33490","green","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT1G80550","green","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G28945","green","transposable_element_gene;(source:Araport11);non-LTR retrotransposon family (LINE), has a 2.5e-29 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus);(source:TAIR10)"]
["AT1G69350","green","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G07715","green","Nucleic acid-binding, OB-fold-like protein;(source:Araport11)"]
["AT2G07718","green","Cytochrome b/b6 protein;(source:Araport11)"]
["AT1G02060","green","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT4G00752","green","UBX domain-containing protein;(source:Araport11)"]
["AT2G01060","green","myb-like HTH transcriptional regulator family protein;(source:Araport11)"]
["AT3G02750","green","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT4G22720","green","Actin-like ATPase superfamily protein;(source:Araport11)"]
["AT4G17370","green","Oxidoreductase family protein;(source:Araport11)"]
["AT1G23450","green","pentatricopeptide (PPR) repeat-containing protein"]
["AT2G07698","green","ATPase, F1 complex, alpha subunit protein;(source:Araport11)"]
["AT5G11580","green","Regulator of chromosome condensation (RCC1) family protein;(source:Araport11)"]
["AT3G54363","green","This gene encodes a small protein and has either evidence of transcription or purifying selection."]
["AT3G54366","green","Unknown gene The mRNA is cell-to-cell mobile."]
["AT2G46070","green","Encodes a MAP kinase protein. MPK12 interacts with the IBR5 protein phosphatase in vitro and in vivo, and it can be dephosphorylated and inactivated by IBR5. MPK12 appears to be a negative regulator of auxin signlaing. MPK12 RNAi lines are hypersensitive to auxin in root elongation and transcriptional response assays, but they appear to have normal sensitivity to ABA. MPK12 is a nuclear protein and its kinase activity is increased following auxin treatment. MPK12 transcripts are widely expressed in seedlings, but MPK12 expression is stronger in guard cells than in other cell types in mature plants."]
["AT3G13340","green","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT3G45650","green","Encodes a nitrate efflux transporter NAXT1 (for NITRATE EXCRETION TRANSPORTER1). Localized to the plasma membrane. NAXT1 belongs to a subclass of seven NAXT members from the large NITRATE TRANSPORTER1/PEPTIDE TRANSPORTER family and is mainly expressed in the cortex of mature roots."]
["AT5G27990","green","Pre-rRNA-processing protein TSR2, conserved region;(source:Araport11)"]
["AT1G07840","green","Sas10/Utp3/C1D family;(source:Araport11)"]
["AT5G07095","green","None;(source:Araport11)"]
["AT1G79190","green","ARM repeat superfamily protein;(source:Araport11)"]
["AT2G24110","green","pseudogene of ribosomal protein S11-beta;(source:Araport11)"]
["AT3G54130","green","Josephin family protein;(source:Araport11)"]
["AT1G80190","green","Similar to the PSF1 component of GINS complex, which in other organism was shown to be involved in the initiation of DNA replication."]
["AT3G48115","green","other_RNA;(source:Araport11)"]
["AT4G02740","green","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT3G26560","green","ATP-dependent RNA helicase;(source:Araport11)"]
["AT1G68580","green","Agenet and bromo-adjacent homology (BAH) domain-containing protein;(source:Araport11)"]
["AT1G68585","green","hypothetical protein;(source:Araport11)"]
["AT2G46900","green","transcription factor-like protein;(source:Araport11)"]
["AT2G02880","green","mucin-like protein;(source:Araport11)"]
["AT5G42080","green","Encodes a dynamin-like protein related to phragmoplastin. Mutations in this gene, in combination with mutation in ADL1E, result in defects in embryogenesis, cell plate formation and trichome branching. Also controls vascular patterning in combination with VAN3 and GNOM. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis.","DYNAMIN-LIKE PROTEIN (DL1)","(ADL1A); (AG68);DYNAMIN-RELATED PROTEIN 1A (DRP1A);RADIAL SWELLING 9 (RSW9);DYNAMIN-LIKE PROTEIN (DL1);DYNAMIN-LIKE PROTEIN (ADL1)"]
["AT1G66680","green","unknown function","(AR401)","(AR401)"]
["AT2G26530","green","Pheromone receptor-like protein involved in the early elicitor signaling events which occur within minutes and include ion fluxes across the plasma membrane, activation of MPKs and the formation of ROS related to PGPS1 and WRKY33.","(AR781)","(AR781)"]
["AT5G37720","green","Encodes a member of a family of proteins involved in export of RNAs from the nucleus and transcriptional coactivation.","(ALY4)","(ATALY4);INTERACTING WITH DNA-BINDING DOMAIN OF ZN-FINGER PARP 1 (DIP2); (ALY4)"]
["AT5G62000","green","Encodes an auxin response factor. Mutants have many defects including enlarged rosette leaves, reduced fertility, later senescence, hypocotyl elongation defects, enlarged seeds and enlarged cotyledons. May not mediate auxin effects. Increase in seed size due to increased cell proliferation. The mRNA is cell-to-cell mobile.","AUXIN RESPONSE FACTOR 2 (ARF2)","(ATARF2);ORESARA 14 (ORE14);AUXIN RESPONSE FACTOR 2 (ARF2);ARF1-BINDING PROTEIN (ARF1-BP);HLS1 SUPPRESSOR (HSS)"]
["AT3G09880","green","Encodes B' regulatory subunit of PP2A (AtB'beta). Functions redundantly with the alpha subunit do maintain sister chromatid cohesion during meiosis.","(ATB' BETA)","(ATB' BETA)"]
["AT5G56900","green","CwfJ-like family protein / zinc finger (CCCH-type) family protein;(source:Araport11)","(ATC3H64)","(ATC3H64)"]
["AT1G27650","green","U2 auxiliary factor small subunit. The atU2AF35a protein and its homolog, atU2AF35b, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.","(ATU2AF35A)","(ATC3H8); (ATU2AF35A)"]
["AT1G15220","green","Encodes a protein with oxidoreductase activity present in the inner membrane of mitochondria. CCMH is postulated to play a central role in mitochondrial cytochrome c maturation, probably as part of a heme lyase complex that also holds activity of reducing apocytochrome c. CCMH interacts with apocytochrome AtCYTc-a and is shown to be present in a 500 kDa-complex along with CcmFN2.","(CCMH)","(ATCCMH); (CCMH)"]
["AT4G15130","green","Phosphorylcholine cytidylyltransferase, a rate limiting enzyme in the de novo synthesis of phosphatidylcholine.","PHOSPHORYLCHOLINE CYTIDYLYLTRANSFERASE2 (CCT2)","(ATCCT2);PHOSPHORYLCHOLINE CYTIDYLYLTRANSFERASE2 (CCT2)"]
["AT3G06010","green","Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein. One of three classes of SWI/SNF ATPases and the core enzyme of MINU1/2-associated SWI/SNF (MAS) complexes (PMID:36471048).AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress.","(ATCHR12)","(ATCHR12);CHROMATIN REMODELING 12 (CHR12); (MINU1)"]
["AT5G47880","green","Encodes a eukaryotic release factor 1 homolog. Cosuppression of the gene's expression results affects cell elongation of the inflorescence stem, specifically the internodes, and radial cell division. Expression of the protein is primarily observed in the vascular system and in actively growing and elongating zones.","EUKARYOTIC RELEASE FACTOR 1-1 (ERF1-1)","(ATERF1-1);EUKARYOTIC RELEASE FACTOR 1-1 (ERF1-1)"]
["AT1G61340","green","Encodes a F-box protein induced by various biotic or abiotic stress.","F-BOX STRESS INDUCED 1 (FBS1)","(ATFBS1);F-BOX STRESS INDUCED 1 (FBS1)"]
["AT5G60980","green","Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11)","(NTF2)","(ATG3BP-1); (ATG3BP8); (NTF2)"]
["AT2G03640","green","Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11)","(ATG3BP4)","(ATG3BP4); (ATG3BP-7); (ATG3BP-6)"]
["AT5G14950","green","Encodes a golgi alpha-mannosidase, an enzyme responsible for the formation of major complex-type N-glycans.","GOLGI ALPHA-MANNOSIDASE II (GMII)","(ATGMII);GOLGI ALPHA-MANNOSIDASE II (GMII)"]
["AT4G37900","green","Protein of unknown function that contains DUF1399 domain and putative RNA binding motif. Expressed in many plant tissues and is involved in many aspects of plant growth and development as well as response to salt stress. Regulates ovule development via the auxin pathway.","(ATGRDP2)","(ATGRDP2);GLYCINE RICH DOMAIN PROTEIN 2 (GRDP2)"]
["AT1G02920","green","Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).","GLUTATHIONE S-TRANSFERASE 7 (GSTF7)","(ATGSTF7);GLUTATHIONE S-TRANSFERASE 11 (GST11); (ATGSTF8);GLUTATHIONE S-TRANSFERASE 7 (GSTF7);ARABIDOPSIS GLUTATHIONE S-TRANSFERASE 11 (ATGST11)"]
["AT3G44110","green","Homologous to the co-chaperon DNAJ protein from E coli. Member of the HSP40 family. Interacts with HSP70-4(AT3G12580) to mediate heat shock response. Formation of HSGs is dependent on the farnyslation status of J3.","(J3)","(ATJ); (J3);DNAJ HOMOLOGUE 3 (ATJ3)"]
["AT4G26480","green","RNA-binding KH domain-containing protein;(source:Araport11)","(ATKH21)","(ATKH21)"]
["AT1G33680","green","KH domain-containing protein;(source:Araport11)","(ATKH3)","(ATKH3)"]
["AT3G63260","green","protein kinase, similar to mammal mixed-lineage kinase and Raf protein kinase","(ATMRK1)","(ATMRK1)"]
["AT5G41190","green","Encodes a cytoplasmic protein with RNA endonuclease activity. Mutants display aberrant RNA processing and male and female gametophyte development.","(NOB1)","(ATNOB1); (NOB1)"]
["AT2G31865","green","poly(ADP-ribose) glycohydrolase 2;(source:Araport11)","POLY(ADP-RIBOSE) GLYCOHYDROLASE 2 (PARG2)","(ATPARG2);POLY(ADP-RIBOSE) GLYCOHYDROLASE 2 (PARG2)"]
["AT4G10610","green","RNA-binding protein, putative. Member of a family of proteins having an PABC binding domain (PAM motif).","CTC-INTERACTING DOMAIN 12 (CID12)","(ATRBP37);CTC-INTERACTING DOMAIN 12 (CID12);RNA-BINDING PROTEIN 37 (RBP37)"]
["AT3G54380","green","SAC3/GANP/Nin1/mts3/eIF-3 p25 family;(source:Araport11)","YEAST SAC3 HOMOLOG C (SAC3C)","(AtSAC3C);YEAST SAC3 HOMOLOG C (SAC3C)"]
["AT5G19660","green","S1P appears to function as a Golgi-localized subtilase and to help protect seedlings against salt and osmotic stress. The roots of s1p-3 mutants are hypersensitive to NaCl, KCl, LiCl, and mannitol. Several salt-stress responsive genes show weaker induction in an s1P-3 mutant background. The proteolytic cleavage of the bZIP17 transcription factor depends on S1P in vitro. And there is evidence that S1P can cleave bZIP17 in vitro.The stability of ac4C-containing transcript encoded by At5g19660 was maintained by ac4C modification","SITE-1 PROTEASE (S1P)","(ATSBT6.1);SITE-1 PROTEASE (ATS1P);SITE-1 PROTEASE (S1P)"]
["AT4G11260","green","Functions in plant disease resistance signaling, SCF(TIR1) mediated degradation of Aux/IAA proteins and HSP90 mediated degradation of R resistance proteins. AtSGT1a and AtSGT1b are functionally redundant in the resistance to pathogenes. AtSGT1b was more highly expressed than AtSGT1. The N-terminal TPR domain of AtSGT1a reduces the steady-state level of Arabidopsis SGT1 proteins whereas the same domain from AtSGT1b enhances SGT1 accumulation. The TPR domain is dispensable for SGT1 resistance.","(SGT1B)","(ATSGT1B);ENHANCER OF TIR1-1 AUXIN RESISTANCE 3 (ETA3); (RPR1);ENHANCED DOWNY MILDEW 1 (EDM1); (SGT1B)"]
["AT1G08490","green","Chloroplastic NifS-like protein that can catalyze the conversion of cysteine into alanine and elemental sulfur (S(0)) and of selenocysteine into alanine and elemental Se (Se(0)). Overexpression enhances selenium tolerance and accumulation.","CHLOROPLASTIC NIFS-LIKE CYSTEINE DESULFURASE (CPNIFS)","(ATSUFS); (SUFS);CHLOROPLASTIC NIFS-LIKE CYSTEINE DESULFURASE (CPNIFS); (ATNFS2); (ATCPNIFS)"]
["AT1G70290","green","Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants.","TREHALOSE-6-PHOSPHATASE SYNTHASE S8 (TPS8)","(ATTPS8);TREHALOSE-6-PHOSPHATASE SYNTHASE S8 (TPS8); (ATTPSC)"]
["AT5G15810","green","Involved in posttranscriptional modification of tRNA.","TRNA METHYLTRANSFERASE 1B (TRM1B)","(ATTRM1B);TRNA METHYLTRANSFERASE 1B (TRM1B)"]
["AT5G01230","green","Encodes a tRNA methyltransferase that mediates the 2'-O-ribose methylation of selected tRNA species in the anticodon loop. Mutation of this gene compromises plant immunity against bacteria.","UPPRESSOR OF CSB3 9 (SCS9)","(ATTRM7A);TRNA METHYLTRANSFERASE 7 (TRM7A);UPPRESSOR OF CSB3 9 (SCS9)"]
["AT5G42820","green","U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.","(U2AF35B)","(ATU2AF35B); (ATC3H60); (U2AF35B)"]
["AT5G05080","green","ubiquitin-conjugating enzyme 22;(source:Araport11)","UBIQUITIN-CONJUGATING ENZYME 22 (UBC22)","(ATUBC22);UBIQUITIN-CONJUGATING ENZYME 22 (UBC22)"]
["AT5G40850","green","Encodes a urophorphyrin III methylase that catalyzes S-adenosyl-L-methionine-dependent transmethylation in a multistep process involving the formation of a covalently linked complex with S-adenosyl-L-methionine. The mRNA is cell-to-cell mobile.","UROPHORPHYRIN METHYLASE 1 (UPM1)","(ATUPM1);UROPHORPHYRIN METHYLASE 1 (UPM1)"]
["AT5G19080","green","Paralog of LOG2 (At3g09770), a ubiquitin ligase that regulates amino acid export.","LOG2-LIKE UBIQUITIN LIGASE3 (LUL3)","(ATVBP1);VRUBC1 BINDING PARTNER 1 (VBP1);LOG2-LIKE UBIQUITIN LIGASE3 (LUL3)"]
["AT3G12300","green","Similar to Bug22p in Paramecium, a conserved centrosomal/ciliary protein. This protein is widespread in eukaryotes harboring centrioles/cilia at some stage of their life cycles. Among eukaryotes devoid of centrioles/cilia, plants possess BUG22 genes whereas some fungi (at least ascomycetes) do not.","(BUG22)","(BUG22); (ATBUG22)"]
["AT5G40880","green","Involved in seed germination, seedling/seed development, interacting with PPPDE family protein Desi1.","(C3H59)","(C3H59); (ATC3H59); (ZFWD3)"]
["AT1G64960","green","ARM repeat superfamily protein;(source:Araport11)","(CAP-G2)","(CAP-G2)"]
["AT5G54520","green","Splicing factor which functions in embryo development by regulating embryonic patterning.","(PRP17)","(CDC40); (PRP17)"]
["AT3G27670","green","A novel protein, did not show high similarity to any protein of known function; reveals a novel genetic connection between lipid synthesis and embryo development. Expressed in all tissues examined including leaves, flowers, roots, stems, and siliques, but accumulation levels were not correlated with the degree to which different organs appeared affected by the mutation. Mutant plants showed alterations in the cuticular wax profiles and embryo development. The mRNA is cell-to-cell mobile.","RESURRECTION1 (RST1)","(CER13);RESURRECTION1 (RST1);ECERIFERUM 13 (CER13)"]
["AT5G14170","green","CHC1 is predicted to encode a protein that belongs to the chromodomain remodeling complex. Two RNAi knock-down lines have a dwarf phenotype and reduced rates of Agrobacterium-mediated transformation. The low rate of root-mediated transformation rate may result from altered root morphology or reduced root growth rates. Also named as SWP73B, it is a subunit that is shared by BRM-, SYD-, and MINU1/2-associated SWI/SNF chromatin remodeling complexes (PMID:36471048). Acts as important modulator of major developmental pathways.","(CHC1)","(CHC1);SWP73B (SWP73B); (BAF60)"]
["AT5G19450","green","calcium-dependent protein kinase (CDPK19) mRNA, complete","CALCIUM-DEPENDENT PROTEIN KINASE 19 (CDPK19)","(CPK8);CALCIUM-DEPENDENT PROTEIN KINASE 19 (CDPK19)"]
["AT1G36730","green","Conserved peptide uORF; regulates translation of any downstream ORF in response to environmental signals heat stress and water limitation.","(CPUORF19)","(CPUORF19)"]
["AT3G10572","green","APEM9 is required for both PTS1- and PTS2-dependent protein transport. APEM9 interacts with PEX6 in BiFC assay and mating-based Split ubiquitin system. BiFC data shows that APEM9 is required for peroxisomal localization of PEX1-PEX6 complex. These results indicate that APEM9 functions like mammalian PEX26 and yeast PEX15.","ABERRANT PEROXISOME MORPHOLOGY 9 (APEM9)","(DAYU); (PEX26); (DAU);ABERRANT PEROXISOME MORPHOLOGY 9 (APEM9)"]
["AT2G14910","green","Interacts with chloroplast chaperone CLPC1, which unfolds and delivers substrates to the stromal CLPPRT protease complex for degradation.","(DUF760-4)","(DUF760-4)"]
["AT4G14385","green","Subunit of the NuA4 complex, has an auxiliary role in the Piccolo NuA4 complex. Contribute to de-etiolation, required for maintenance of the green status of plant leaves.EAF6 is a shared subunit of the PAGA and NuA4 histone acetyltransferases in Arabidopsis.","(EAF6)","(EAF6)"]
["AT5G58370","green","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","(ENGB-3)","(ENGB-3)"]
["AT4G02020","green","Encodes a polycomb group protein. Forms part of a large protein complex that can include VRN2 (VERNALIZATION 2), VIN3 (VERNALIZATION INSENSITIVE 3) and polycomb group proteins FERTILIZATION INDEPENDENT ENDOSPERM (FIE) and CURLY LEAF (CLF). The complex has a role in establishing FLC (FLOWERING LOCUS C) repression during vernalization. Performs a partially redundant role to MEA in controlling seed initiation by helping to suppress central cell nucleus\u0002endosperm proliferation within the FG.","SWINGER (SWN)","(EZA1);SWINGER (SWN);SET DOMAIN-CONTAINING PROTEIN 10 (SDG10)"]
["AT3G11750","green","Encodes an enzyme that can act as a aldolase or an epimerase for 7,8-dihydroneopterin and 7,8-dihydromonapterin in vitro. It is likely to act in tetrahydrofolate biosynthesis in vivo.","(FOLB1)","(FOLB1)"]
["AT2G43820","green","Encodes a nicotinate-O-glycosyltransferase. Induced by Salicylic acid, virus, fungus and bacteria. Also involved in the tryptophan synthesis pathway. Independent of NPR1 for their induction by salicylic acid. UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside (SAG) and a glucose ester (SGE)), benzoic acid, and anthranilate in vitro. UGT74F2 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques.","UDP-GLUCOSYLTRANSFERASE 74F2 (UGT74F2)","(GT);UDP-GLUCOSYLTRANSFERASE 74F2 (UGT74F2);ARABIDOPSIS THALIANA SALICYLIC ACID GLUCOSYLTRANSFERASE 1 (ATSAGT1);UDP-GLUCOSE:SALICYLIC ACID GLUCOSYLTRANSFERASE 1 (SGT1);SALICYLIC ACID GLUCOSYLTRANSFERASE 1 (SAGT1)"]
["AT2G34900","green","Encodes a member of the BET subgroup of bromodomain proteins, a novel class of putative transcription factors. Its expression is induced during seed imbibition and downregulated during germination. Seeds of a loss-of-function mutant allele, imb1, show impaired cotyledon greening during germination in abscisic acid (ABA) and express higher levels of ABI5 protein than the wild type. Moreover, imb1 seeds are deficient in the phytochrome A (phyA)-mediated very-low-fluence response of germination.","IMBIBITION-INDUCIBLE 1 (IMB1)","(GTE01);IMBIBITION-INDUCIBLE 1 (IMB1);GLOBAL TRANSCRIPTION FACTOR GROUP E1 (GTE1)"]
["AT1G09940","green","Encodes glutamyl-tRNA reductase. Involved in heme biosynthesis in non-photosynthetic tissues and induced by oxidative stress in photosynthetic tissues to supply heme for defensive hemoproteins","(HEMA2)","(HEMA2)"]
["AT1G68670","green","HHO2 is a HRS1 homolog. Nitrate-inducible expression. Also induced in roots by low Pi and is likely involved in maintaining phosphate homeostasis. It is target of PHR1.Both HHO2 and HRS1 are involved in Ni cross regulation of Pi signaling. They function as transcriptional repressors of SPX1, SPX2, and SPX4 as part of a cascade to regulate nitrogen and phosphorus balance. Transcriptional repressors that functions with other NIGT genes as an important hub in the nutrient signaling network associated with the acquisition and use of nitrogen and phosphorus.","(HHO2)","(HHO2);NITRATE-INDUCIBLE, GARP-TYPE TRANSCRIPTIONAL REPRESSOR 1/HYPERSENSITIVE TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1.2 (NIGT1.2)"]
["AT1G76810","green","Functions in 18S rRNA maturation at the late 40S assembly stage as part of a regulatory crosstalk among ribosome biogenesis, messenger RNA (mRNA) translation initiation, and siRNA biogenesis in plants.","(EIF5B1)","(HOT3); (EIF5B1)"]
["AT1G26170","green","Ran effector.","(IMB5)","(IMB5)"]
["AT2G26190","green","IQM4 is a plastid localized, Ca2+ independent calmodulin binding protein that is involved in promoting seed dormancy.","(IQM4)","(IQM4)"]
["AT5G56140","green","Member of the K-homologous (KH) family, members have a type of nucleic acid-binding protein containing the KH domain and has been found to affect splicing and transcriptional regulation.","(KH29)","(KH29)"]
["AT1G18160","green","required for ABA- and osmotic-stress-MAP3 kinase required for activation of SnRK2 kinases, enabling robust ABA and osmotic stress signal transduction.","(M3Kdelta7)","(M3Kdelta7)"]
["AT3G62860","green","alpha/beta-Hydrolases superfamily protein;(source:Araport11)","(MAGL12)","(MAGL12)"]
["AT4G08470","green","Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301.","MAPK/ERK KINASE KINASE 3 (MEKK3)","(MAPKKK10);MAPK/ERK KINASE KINASE 3 (MEKK3)"]
["AT3G18870","green","Mitochondrial transcription termination factor family member.","(MTERF11)","(MTERF11)"]
["AT1G62085","green","Mitochondrial transcription termination factor family protein;(source:Araport11)","(MTERF24)","(MTERF24)"]
["AT5G05100","green","R3H RNA binding protein that interacts with AGO2 and miRNA.","(MUG13.4)","(MUG13.4)"]
["AT5G42950","green","EXA1 is a GYF domain-containing gene of the SMY2 subgroup. Mutants exhibit resistance to potexviruses.","ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 (EXA1)","(MUSE11);ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1 (EXA1)"]
["AT5G06560","green","myosin-binding protein (Protein of unknown function, DUF593);(source:Araport11)","(MYOB7)","(MYOB7)"]
["AT3G54630","green","kinetochore protein;(source:Araport11)","(NDC80)","(NDC80)"]
["AT5G13950","green","nuclear factor kappa-B-binding protein;(source:Araport11)","(NFRKB2)","(NFRKB2)"]
["AT1G50920","green","Putative GTPase involved in HA - and ABA-mediated signaling pathways, particularly during defense respnses to pathogens. Has paralog NOG1-2.","(NOG1-1)","(NOG1-1)"]
["AT5G18420","green","CCR4-NOT transcription complex subunit;(source:Araport11)","(NOT11)","(NOT11)"]
["AT3G45630","green","RNA binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)","(NOT4B)","(NOT4B)"]
["AT5G66900","green","RPW8 -CNL gene is required for signal transduction of TNLs; functionally redundant to NRG1.2. Exhibits autoimmunity.","N REQUIREMENT GENE 1.1 (NRG1.1)","(NRG1A);N REQUIREMENT GENE 1.1 (NRG1.1)"]
["AT4G21710","green","Encodes the unique second-largest subunit of DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit.","(NRPB2)","(NRPB2);EMBRYO DEFECTIVE 1989 (EMB1989); (RPB2)"]
["AT4G14660","green","Non-catalytic subunit specific to DNA-directed RNA polymerase V; homologous to budding yeast RPB7","(NRPE7)","(NRPE7)"]
["ATMG01130","green","hypothetical protein;(source:Araport11)","(ORF106F)","(ORF106F)"]
["ATMG00660","green","hypothetical protein;(source:Araport11)","(ORF149)","(ORF149)"]
["ATMG00690","green","FO-ATPase subunit;(source:Araport11)","(ORF240A)","(ORF240A)"]
["ATMG01090","green","ATP synthase 9 mitochondrial;(source:Araport11)","(ORF262)","(ORF262)"]
["ATMG00670","green","transmembrane protein;(source:Araport11)","(ORF275)","(ORF275)"]
["ATMG01200","green","ATPase, F1 complex, alpha subunit;(source:Araport11)","(ORF294)","(ORF294)"]
["ATMG00040","green","ATP synthase subunit C family protein;(source:Araport11)","(ORF315)","(ORF315)"]
["AT5G20350","green","Encodes a protein containing ankyrin and DHHC-CRD domain. Acts to restrict the size of the swelling that forms at the beginning of root hair cell growth, possibly by a mechanism that requires RHD1. Mutant displays defects in both root hair and pollen tube growth. The mRNA is cell-to-cell mobile.","TIP GROWTH DEFECTIVE 1 (TIP1)","(PAT24);TIP GROWTH DEFECTIVE 1 (TIP1)"]
["AT1G77600","green","One of 5 PO76/PDS5 cohesion cofactor orthologs of Arabidopsis.","(PDS5B)","(PDS5B); (ATPDS5B)"]
["AT1G33340","green","ENTH/ANTH/VHS superfamily protein;(source:Araport11)","(PICALM8)","(PICALM8)"]
["AT3G28210","green","Encodes a putative zinc finger protein (PMZ).","(PMZ)","(PMZ);STRESS-ASSOCIATED PROTEIN 12 (SAP12)"]
["AT1G07970","green","cytochrome B561, amino-terminal protein;(source:Araport11)","(PNET1)","(PNET1)"]
["AT1G76140","green","Putative prolyl oligopeptidase.","(POQR-LIKE)","(POQR-LIKE)"]
["AT1G22740","green","GTP-binding protein Rab7","RAB GTPASE HOMOLOG G3B (RABG3B)","(RAB7);RAB GTPASE HOMOLOG G3B (RABG3B); (RAB75); (ATRABG3B)"]
["AT5G50340","green","DNA repair protein RadA-like protein;(source:Araport11)","RADA-LIKE (ATRADA)","(RADA);RADA-LIKE (ATRADA)"]
["AT5G58950","green","Encodes a group C Raf-like protein kinase that is involved in susceptibility to oomycyte pathogens and interacts with multiple SnRK2s. Raf36 negatively regulates ABA responses during postgermination growth.","(RAF36)","(RAF36)"]
["AT4G11230","green","NADPH-oxidase RbohI is expressed highly in seeds and roots. Mutants have inreased sensitivity to osmotic stress suggesting a role in mediating cellular response to stress in roots.","(RBOHI)","(RBOHI)"]
["AT3G52260","green","Enzyme for the pseudouridine (&#936;) to uridine (U) conversion.","(RLUA7)","(RLUA7)"]
["ATMG00560","green","encodes a mitochondrial ribosomal protein L2, a constituent of the large subunit of the ribosomal complex","(RPL2)","(RPL2);RIBOSOMAL PROTEIN UL2MZ (UL2MZ)"]
["ATCG00170","green","RNA polymerase beta' subunit-2","(RPOC2)","(RPOC2)"]
["AT5G18110","green","Involved in resistance to Plutella xylostella through the accumulation of the homoterpene DMNT.","NOVEL CAP-BINDING PROTEIN (NCBP)","(RPX1);NOVEL CAP-BINDING PROTEIN (NCBP)"]
["AT3G08800","green","Encodes a nuclear and endosome localized protein with ARM and HEAT domains that interacts with SHR and other non-cell-autonomous proteins and may be involved in their intercellular movement. Hypomorphic mutant phenotypes suggest involvement of the protein in root patterning.","SHORT-ROOT INTERACTING EMBRYONIC LETHAL (SIEL)","(SIEL1);SHORT-ROOT INTERACTING EMBRYONIC LETHAL (SIEL);DEFECTIVE IN SNRNA PROCESSING 3 (DSP3)"]
["AT3G61790","green","SINAT E3 ubiquitin ligase involved in mediation of FREE1 and VPS23A degradation to modulate abscisic acid signaling.","(SINAT3)","(SINAT3)"]
["AT1G14200","green","E3 ligase involved in the regulation of the homeostasis of sensor NLR immune receptors.","(SNIPER1)","(SNIPER1); (USR1)"]
["AT3G03750","green","SET domain protein 20;(source:Araport11)","SET DOMAIN PROTEIN 20 (SDG20)","(SUVR3);SET DOMAIN PROTEIN 20 (SDG20)"]
["AT5G56680","green","Encodes a putative cytosolic asparaginyl-tRNA synthetase. The mRNA is cell-to-cell mobile.","(SYNC1)","(SYNC1);EMBRYO DEFECTIVE 2755 (EMB2755); (SYNC1 ARATH)"]
["AT1G27595","green","Encodes a protein of unknown function containing a Symplekin C domain that is involved in negative regulation of glucose response. Mutants show increased sensitivity to glucose with a variety of assays.","(TANG1)","(TANG1)"]
["AT4G11240","green","encodes a type I serine/threonine protein phosphatase expressed in expressed in roots, rosettes and flowers.","(TOPP7)","(TOPP7)"]
["AT1G05270","green","TraB family protein that localizes to the outer mitochondrial membrane and tether to ER. Potential regulating mitophagy via interactions with ATG8.","(TRB1)","(TRB1)"]
["AT1G78010","green","tRNA modification GTPase;(source:Araport11)","(TRME)","(TRME)"]
["AT1G34150","green","Enzyme for the pseudouridine (&#936;) to uridine (U) conversion.","(TRUA3)","(TRUA3)"]
["AT5G14460","green","Enzyme for the pseudouridine (&#936;) to uridine (U) conversion.","(TRUB2)","(TRUB2)"]
["AT3G22450","green","Member of the uL18 RNA-binding protein family. uL18 proteins share a short structurally conserved domain that binds the 5S rRNA and allow its incorporation into ribosomes. Required for the splicing of two mitochondrial introns.","(UL18-L1)","(UL18-L1)"]
["AT2G46520","green","cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter;(source:Araport11)","(XPO2)","(XPO2)"]
["AT5G38600","green","Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein;(source:Araport11)","(ZCCHC8A)","(ZCCHC8A)"]
["AT1G59540","green","Encodes a kinesin-like protein.","(ZCF125)","(ZCF125)"]
["AT3G57760","green","Protein kinase superfamily protein;(source:Araport11)","(ZRK6)","(ZRK6)"]
["AT1G14410","green","Encodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length.","WHIRLY 1 (WHY1)","A. THALIANA WHIRLY 1 (ATWHY1); (PTAC1);WHIRLY 1 (WHY1)"]
["AT2G40090","green","member of ATH subfamily","ABC2 HOMOLOG 9 (ATH9)","ABC2 HOMOLOG 9 (ATATH9);ABC2 HOMOLOG 9 (ATH9); (ABC1K15)"]
["AT5G47040","green","Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins.","LON PROTEASE 2 (LON2)","ABERRANT PEROXISOME MORPHOLOGY 10 (APEM10);LON PROTEASE 2 (LON2)"]
["AT3G19720","green","Encodes a novel chloroplast division protein. Mutants of exhibit defects in chloroplast constriction, have enlarged, dumbbell-shaped chloroplasts. The ARC5 gene product shares similarity with the dynamin family of GTPases, which mediate endocytosis, mitochondrial division, and other organellar fission and fusion events in eukaryotes. Phylogenetic analysis showed that ARC5 is related to a group of dynamin-like proteins unique to plants. A GFP-ARC5 fusion protein localizes to a ring at the chloroplast division site. Chloroplast import and protease protection assays indicate that the ARC5 ring is positioned on the outer surface of the chloroplast. Facilitates separation of the two daughter chloroplasts.","ACCUMULATION AND REPLICATION OF CHLOROPLAST 5 (ARC5)","ACCUMULATION AND REPLICATION OF CHLOROPLAST 5 (ARC5);DYNAMIN RELATED PROTEIN 5B (DRP5B)"]
["AT5G42480","green","Shows homology to the cyanobacterial cell division protein Ftn2, mutant only has two mesophyll cell chloroplasts. Protein was localized to a ring at the center of the chloroplasts. Probably involved in functions in the assembly and/or stabilization of the plastid-dividing FtsZ ring, inhibiting FtsZ filament formation in the chloroplast.","ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6 (ARC6)","ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6 (ARC6)"]
["AT2G31810","green","Encodes the small subunit of acetolactate synthase; partially responsible for resistance to hypoxic stress.","ACETOLACTATE SYNTHASE SMALL SUBUNIT 1 (AHASS1)","ACETOLACTATE SYNTHASE SMALL SUBUNIT 1 (AHASS1);ALS-INTERACTING PROTEIN1 (AIP1)"]
["AT1G18450","green","Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP family of genes. Component of chromatin remodeling complexes, involved in chromatin-mediated gene regulation. Phenotype of the arp4-1 mutant allele revealed partial sterility due to defects in anther development. Targeting the distinct, 3' UTR of AtARP4 transcripts with RNA interference caused a drastic reduction in the level of AtARP4 protein expression, and resulted in strong pleiotropic phenotypes such as altered organization of plant organs, early flowering, delayed flower senescence and high levels of sterility. Western blot analysis and immunolabelling demonstrated a clear correlation between reductions in the level of AtARP4 expression and severity of the phenotypes.Identified as subunit shared by NuA4, INO80, SWR1, BRM-, SYD-, and MINU1/2-associated SWI/SNF chromatin remodeling complexes(PMID:36471048).","ACTIN-RELATED PROTEIN 4 (ARP4)","ACTIN-RELATED PROTEIN 4 (ATARP4);ACTIN-RELATED PROTEIN 4 (ARP4)"]
["AT5G23050","green","acyl-activating enzyme 17;(source:Araport11)","ACYL-ACTIVATING ENZYME 17 (AAE17)","ACYL-ACTIVATING ENZYME 17 (AAE17)"]
["AT1G31730","green","Encodes a component of the AP4 complex and is involved in vacuolar sorting of storage proteins.","ADAPTOR PROTEIN COMPLEX 4E (AP4E)","ADAPTOR PROTEIN COMPLEX 4E (AP4E)"]
["AT2G47420","green","Encodes a putative rRNA dimethyltransferase.","ADENOSINE DIMETHYL TRANSFERASE 1A (DIM1A)","ADENOSINE DIMETHYL TRANSFERASE 1A (DIM1A)"]
["AT5G66360","green","Encodes a mitochondrial rRNA dimethylase.","ADENOSINE DIMETHYL TRANSFERASE 1B (DIM1B)","ADENOSINE DIMETHYL TRANSFERASE 1B (DIM1B)"]
["AT2G36350","green","Member of AGC VIIIa Kinase gene family.","AGC VIIIA KINASE 1-9 (AGC1-9)","AGC VIIIA KINASE 1-9 (AGC1-9); (KIPK2)"]
["AT1G72330","green","Encodes for alanine aminotransferase ALAAT2.","ALANINE AMINOTRANSFERASE 2 (ALAAT2)","ALANINE AMINOTRANSFERASE 2 (ALAAT2)"]
["AT1G50200","green","Alanyl-tRNA synthetase;(source:Araport11)","ALANYL-TRNA SYNTHETASE (ALATS)","ALANYL-TRNA SYNTHETASE (ALATS)"]
["AT3G42790","green","Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7).","ALFIN-LIKE 3 (AL3)","ALFIN-LIKE 3 (AL3)"]
["AT3G56190","green","Encodes one of two alpha-SNAPs (soluble NSF attachment protein) in Arabidopsis","ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2 (ALPHA-SNAP2)","ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 2 (ALPHA-SNAP2); (ASNAP)"]
["AT3G54720","green","Encodes glutamate carboxypeptidase. Various alleles show-increased cotyledon number and rate of leaf initiation, show transformation of leaves to cotyledons, altered flowering time and photomorphogenesis and an increased level of cytokinin biosynthesis. Involved in ethylene enhanced hypocotyl elongation in the light. Strong genetic interaction between TGH and AMP1.","ALTERED MERISTEM PROGRAM 1 (AMP1)","ALTERED MERISTEM PROGRAM 1 (AMP1);CONSTITUTIVE MORPHOGENESIS 2 (COP2);HAUPTLING (HPT);PRIMORDIA TIMING (PT);MULTIFOLIA (MFO1); (MFO1); (ATAMP1)"]
["AT5G47580","green","transmembrane protein;(source:Araport11)","ALTERED SEED GERMINATION 7 (ASG7)","ALTERED SEED GERMINATION 7 (ASG7)"]
["AT2G38290","green","encodes a high-affinity ammonium transporter, which is expressed in shoot and root. Expression in root and shoot is under nitrogen and carbon dioxide regulation, respectively.","AMMONIUM TRANSPORTER 2 (AMT2)","AMMONIUM TRANSPORTER 2 (ATAMT2);AMMONIUM TRANSPORTER 2;1 (AMT2;1);AMMONIUM TRANSPORTER 2 (AMT2)"]
["AT2G39090","green","tetratricopeptide repeat (TPR)-containing protein;(source:Araport11)","ANAPHASE-PROMOTING COMPLEX 7 (APC7)","ANAPHASE-PROMOTING COMPLEX 7 (APC7); (AtAPC7)"]
["AT3G15400","green","Encodes a protein with novel repeat sequences and a glycine-rich domain which has a 53% identity to GRP1, a petunia glycine-rich cell wall protein. DYT1 and bHLH089 specifically recognize the TCATGTGC box to activate expression.","ANTHER 20 (ATA20)","ANTHER 20 (ATA20)"]
["AT3G60350","green","ARABIDILLO-2 and its homolog, ARABIDILLO -1, are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-2 promote lateral root development. Mutant plants form fewer lateral roots, while ARABIDILLO-2-overexpressing lines produce more lateral roots than wild-type seedlings.","ARABIDILLO-2 (ARABIDILLO-2)","ARABIDILLO-2 (ARABIDILLO-2);F-BOX ARMADILLO PROTEIN 2 (ARABIDILLO2)"]
["AT2G01440","green","Encodes an ortholog of the bacterial RecG translocase, an organellar protein with multiple roles in mtDNA maintenance. The protein is targeted to mitochondria and plastids and is required for recombination-dependent repair and for suppression of ectopic recombination in mitochondria, most likely because of its role in recovery of stalled replication forks.","ARABIDOPSIS HOMOLOG OF BACTERIAL RECG (RECG)","ARABIDOPSIS HOMOLOG OF BACTERIAL RECG (RECG); (RECG1)"]
["AT1G79090","green","Encodes a component of the mRNA decapping machinery that is found in complexes with and is phosphorylated by MPK4. The protein can be found in P-bodies after treatment with PAMPs. Pat1 mutants exhibit dwarfism and de-repressed immunity dependent on the immune receptor SUMM2. The pat1 constitutive defense phenotype is suppressed by summ2 such that pat1 summ2 mutants display a wild-type phenotype in response to biotrophic and necrotrophic pathogens.","ARABIDOPSIS HOMOLOG OF YEAST PAT1 (PAT1)","ARABIDOPSIS HOMOLOG OF YEAST PAT1 (PAT1)"]
["AT5G05660","green","Encodes a homolog of the mammalian zinc finger transcription factor NF-X1.","NFX1-LIKE 2 (NFXL2)","ARABIDOPSIS NF-X LIKE 2 (ATNFXL2);NFX1-LIKE 2 (NFXL2);EARLY BIRD (EBI)"]
["AT5G06750","green","Protein phosphatase 2C family protein;(source:Araport11)","ARABIDOPSIS PP2C CLADE D 8 (APD8)","ARABIDOPSIS PP2C CLADE D 8 (APD8)"]
["AT1G09770","green","Member of MYB3R- and R2R3- type MYB- encoding genes. Essential for plant innate immunity. Interacts with MOS4 and PRL1. The mRNA is cell-to-cell mobile.","CELL DIVISION CYCLE 5 (CDC5)","ARABIDOPSIS THALIANA CELL DIVISION CYCLE 5 (ATCDC5);CELL DIVISION CYCLE 5 (CDC5);ARABIDOPSIS THALIANA MYB DOMAIN CELL DIVISION CYCLE 5 (ATMYBCDC5)"]
["AT5G60790","green","Member of GCN subfamily. Is one of 5 Arabidopsis homologs for the yeast protein GCN20, which is a F-type ATP binding cassette protein that functions together with yeast GCN1 and GCN2 in translational control. None of these five Arabidopsis homologs are individually required for GCN2 kinase activity.","ATP-BINDING CASSETTE F1 (ABCF1)","ARABIDOPSIS THALIANA GENERAL CONTROL NON-REPRESSIBLE 1 (ATGCN1);GENERAL CONTROL NON-DEREPRESSIBLE 20 (GCN20);ATP-BINDING CASSETTE F1 (ABCF1);GENERAL CONTROL NON-REPRESSIBLE 1 (GCN1)"]
["AT1G26360","green","Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco but no enzymatic activity has been identified for this protein.","METHYL ESTERASE 13 (MES13)","ARABIDOPSIS THALIANA METHYL ESTERASE 13 (ATMES13);METHYL ESTERASE 13 (MES13)"]
["AT5G10300","green","Encodes a protein with R-selective hydroxynitrile lyase activity. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.","METHYL ESTERASE 5 (MES5)","ARABIDOPSIS THALIANA METHYL ESTERASE 5 (ATMES5); (AtHNL);HYDROXYNITRILE LYASE (HNL);METHYL ESTERASE 5 (MES5)"]
["AT5G02250","green","Encodes a exoribonuclease involved in rRNA processing in mitochondria and chloroplasts.Loss of function mutations are pale green and require supplementation with sucrose for germination and early development. Plants are pale green due to defects in chloroplast biogenesis.","EMBRYO DEFECTIVE 2730 (EMB2730)","ARABIDOPSIS THALIANA MITOCHONDRIAL RNASE II (ATMTRNASEII);EMBRYO DEFECTIVE 2730 (EMB2730);RIBONUCLEOTIDE REDUCTASE 1 (RNR1)"]
["AT3G26690","green","Encodes AtNUDT13, a mitochondrial Nudix hydrolase specific for long-chain diadenosine polyphosphates.","NUDIX HYDROLASE HOMOLOG 13 (NUDX13)","ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13 (ATNUDT13);NUDIX HYDROLASE HOMOLOG 13 (ATNUDX13);NUDIX HYDROLASE HOMOLOG 13 (NUDX13)"]
["AT5G64200","green","encodes an SC35-like splicing factor of 35 kD localized to the nuclear specks.","ORTHOLOG OF HUMAN SPLICING FACTOR SC35 (SC35)","ARABIDOPSIS THALIANA ORTHOLOG OF HUMAN SPLICING FACTOR SC35 (ATSC35);ORTHOLOG OF HUMAN SPLICING FACTOR SC35 (At-SC35);ORTHOLOG OF HUMAN SPLICING FACTOR SC35 (SC35)"]
["AT4G19210","green","member of RLI subfamily The mRNA is cell-to-cell mobile.","ATP-BINDING CASSETTE E2 (ABCE2)","ARABIDOPSIS THALIANA RNASE L INHIBITOR PROTEIN 2 (ATRLI2);RNASE L INHIBITOR PROTEIN 2 (RLI2);ATP-BINDING CASSETTE E2 (ABCE2)"]
["AT4G16130","green","Arabinokinase.","ARABINOSE KINASE (ARA1)","ARABINOSE KINASE (ARA1); (ISA1); (ATISA1)"]
["AT3G53500","green","Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926.","ARGININE/SERINE-RICH ZINC KNUCKLE-CONTAINING PROTEIN 32 (RS2Z32)","ARGININE/SERINE-RICH ZINC KNUCKLE-CONTAINING PROTEIN 32 (RSZ32);ARGININE/SERINE-RICH ZINC KNUCKLE-CONTAINING PROTEIN 32 (At-RS2Z);ARGININE/SERINE-RICH ZINC KNUCKLE-CONTAINING PROTEIN 32 (RS2Z32)"]
["AT2G37340","green","encodes an RS-containing Zinc knuckle protein with molecular mass of 33kDa that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926.","ARGININE/SERINE-RICH ZINC KNUCKLE-CONTAINING PROTEIN 33 (RS2Z33)","ARGININE/SERINE-RICH ZINC KNUCKLE-CONTAINING PROTEIN 33 (RSZ33);ARGININE/SERINE-RICH ZINC KNUCKLE-CONTAINING PROTEIN 33 (atRSZ33);ARGININE/SERINE-RICH ZINC KNUCKLE-CONTAINING PROTEIN 33 (RS2Z33);ARGININE/SERINE-RICH ZINC KNUCKLE-CONTAINING PROTEIN 33 (AT-RS2Z33)"]
["AT1G05890","green","RING/U-box superfamily protein;(source:Araport11)","ARIADNE 5 (ARI5)","ARIADNE 5 (ARI5)"]
["AT5G19330","green","Encodes an armadillo repeat protein involved in the abscisic acid response. The protein interacts with a transcription factor, ABF2, which controls ABA-dependent gene expression via the G-box-type ABA-responsive elements.","ARM REPEAT PROTEIN INTERACTING WITH ABF2 (ARIA)","ARM REPEAT PROTEIN INTERACTING WITH ABF2 (ARIA)"]
["AT2G19640","green","ASH1-related protein 2;(source:Araport11)","ASH1-RELATED 2 (ASHR2)","ASH1-RELATED 2 (ASHR2)"]
["AT1G20910","green","ARID/BRIGHT DNA-binding domain-containing protein;(source:Araport11)","AT RICH INTERACTION DOMAIN 3 (ARID3)","AT RICH INTERACTION DOMAIN 3 (ARID3)"]
["AT1G76510","green","ARID/BRIGHT DNA-binding domain-containing protein;(source:Araport11)","AT RICH INTERACTION DOMAIN 4 (ARID4)","AT RICH INTERACTION DOMAIN 4 (ARID4)"]
["AT4G36090","green","mRNA N6-methyladenosine dioxygenase that is active during seed germination and seedling growth and is responsive to stress conditions.","ATALKBH9C (ALKBH9C)","ATALKBH9C (ALKBH9C)"]
["AT5G40820","green","Encodes a Arabidopsis ortholog of the ATR protein kinase that is involved in a wide range of responses to DNA damage and plays a central role in cell-cycle regulation. Dominant loss of function alleles identified as suppressors of ALS also exhibit increased tolerance to aluminum. This may be due to the inhibition of terminal differentiation of the root apex upon exposure to Al.","ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED 2 (ATR-2)","ATAXIA TELANGIECTASIA-MUTATED AND RAD3-RELATED 2 (ATR-2)"]
["AT2G45980","green","Encodes an Atg8-interacting protein that is partially associated with the ER during favorable growth conditions and becomes mainly associated with a spherical compartment that dynamically moves along the ER network. In stress induced plants, ATI1 is localized to a novel plastid associated bodies that are transported to vesicles, in what appears to be an autophagy dependent process. ATI1 interacts with number of other plastid proteins such as NPQ4 and APE1.","ATG8-INTERACTING PROTEIN 1 (ATI1)","ATG8-INTERACTING PROTEIN 1 (ATI1)"]
["ATMG01190","green","ATPase subunit 1","ATP SYNTHASE SUBUNIT 1 (ATP1)","ATP SYNTHASE SUBUNIT 1 (ATP1)"]
["AT4G29900","green","one of the type IIB calcium pump isoforms. encodes an autoinhibited Ca(2+)-ATPase that contains an N-terminal calmodulin binding autoinhibitory domain.ACA8 and ACA10, as well as ACA4 and ACA11, are critical in maintaining low resting cytosol Ca2+ level (DOI:10.1093/plphys/kiad047)","AUTOINHIBITED CA(2+)-ATPASE 10 (ACA10)","AUTOINHIBITED CA(2+)-ATPASE 10 (ACA10);COMPACT INFLORESCENCE 1 (CIF1); (ATACA10)"]
["AT3G07525","green","Encodes an E1 ligase involved in autophagic vesicle formation.","AUTOPHAGY 10 (ATG10)","AUTOPHAGY 10 (ATG10); (ATATG10)"]
["AT5G48380","green","Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway.","BAK1-INTERACTING RECEPTOR-LIKE KINASE 1 (BIR1)","BAK1-INTERACTING RECEPTOR-LIKE KINASE 1 (BIR1)"]
["AT3G19860","green","A basic helix?loop?helix (bHLH) transcription factor which acts as an essential part of the iron deficiency signaling pathway. The phosphorylated form of URI accumulates under Fe deficiency, forms heterodimers with subgroup IVc proteins, and induces transcription of bHLH38/39/100/101. These transcription factors in turn heterodimerize with FIT and drive the transcription of IRT1 and FRO2 to increase Fe uptake.","BASIC HELIX-LOOP-HELIX 121 (bHLH121)","BASIC HELIX-LOOP-HELIX 121 (bHLH121);R UPSTREAM REGULATOR OF IRT1 (URI)"]
["AT2G21230","green","bZIP30 is a transcriptional activator that is involved in regulation of growth and development of reproductive organs. It interacts with a number of developmental regulators including WUS, HEC1, KNAT1/BP, KNAT2, JAB, BEL1, and NGA1.","BASIC LEUCINE-ZIPPER 30 (BZIP30)","BASIC LEUCINE-ZIPPER 30 (BZIP30);DRINK ME (DKM)"]
["AT3G09000","green","Encodes a microtubule-associated protein. Plays a minor role in cortical microtubule organization during leaf development.","BASIC PROLINE-RICH PROTEIN2 (BPP2)","BASIC PROLINE-RICH PROTEIN2 (BPP2)"]
["AT2G33500","green","B-box type zinc finger protein with CCT domain-containing protein;(source:Araport11)","B-BOX DOMAIN PROTEIN 12 (BBX12)","B-BOX DOMAIN PROTEIN 12 (BBX12)"]
["AT5G64920","green","Encodes a RING-H2 protein that interacts with the RING finger domain of COP1. CIP8 exhibits a strong interaction with the E2 ubiquitin conjugating enzyme AtUBC8 through its N-terminal domain and promotes ubiquitination in an E2-dependent fashion in vitro. It is possible that the AtUBC8-CIP8 module might interact with COP1 in vivo, thereby participating in proteasome-mediated degradation of HY5.","COP1-INTERACTING PROTEIN 8 (CIP8)","BCA2A ZINC FINGER ATL 12 (BTL12);COP1-INTERACTING PROTEIN 8 (CIP8)"]
["AT1G55530","green","RING/U-box superfamily protein;(source:Araport11)","BCA2A ZINC FINGER ATL 6 (BTL06)","BCA2A ZINC FINGER ATL 6 (BTL06)"]
["AT1G78700","green","BES1/BZR1 homolog 4;(source:Araport11)","BES1/BZR1 HOMOLOG 4 (BEH4)","BES1/BZR1 HOMOLOG 4 (BEH4)"]
["AT5G38860","green","Encodes BES1-INTERACTING MYC-LIKE 3 (BIM3), a PAR1 (PHYTOCHROME RAPIDLY REGULATED 1)-interacting protein that positively modulates the shade avoidance syndrome in Arabidopsis seedlings.","BES1-INTERACTING MYC-LIKE PROTEIN 3 (BIM3)","BES1-INTERACTING MYC-LIKE PROTEIN 3 (BIM3)"]
["AT1G52360","green","Part of Coat Protein Complexes (COPs). The presence of &#946;?1-COP and &#946;?2-COP is required for female and male gametophyte development.","BETA PRIME1-COP (B?1-COP)","BETA PRIME1-COP (B?1-COP)"]
["AT3G23920","green","Encodes a chloroplast beta-amylase. Is necessary for leaf starch breakdown in the absence of BAM3.Activity of BAM1 increases 4 days after osmotic stress. BAM1 has a higher temperature optimum than BAM3 (PMID:25293962).","BETA-AMYLASE 1 (BAM1)","BETA-AMYLASE 1 (BAM1);BETA-AMYLASE 7 (BMY7); (TR-BAMY); (ATBAM1)"]
["AT5G55700","green","In vitro assay indicates no beta-amylase activity of BAM4. However mutation in BAM4 impairs starch breakdown. BAM4 may play a regulatory role.","BETA-AMYLASE 4 (BAM4)","BETA-AMYLASE 4 (BAM4);BETA-AMYLASE 6 (BMY6)"]
["AT4G25700","green","Converts beta-carotene to zeaxanthin via cryptoxanthin.","BETA-HYDROXYLASE 1 (BETA-OHASE 1)","BETA-HYDROXYLASE 1 (BETA-OHASE 1); (B1); (chy1);BETA CAROTENOID HYDROXYLASE 1 (BCH1)"]
["AT1G59640","green","A basic helix-loop-helix encoding gene (BIGPETAL, BPE) involved in the control of petal size. BPE is expressed via two mRNAs derived from an alternative splicing event. The BPEub (AT1G59640.1)transcript is expressed ubiquitously, whereas the BPEp (AT1G59640.2) transcript is preferentially expressed in petals. Plants that lack the petal-expressed variant BPEp have larger petals as a result of increased cell size. BPEp is positively regulated downstream of APETALA3, PISTILLATA, APETALA1 and PISTILLATA3 and is negatively regulated downstream of AGAMOUS.","BIG PETAL P (BPEP)","BIG PETAL P (BPEP);BIG PETAL (BPE); (ZCW32)"]
["AT2G42160","green","Encodes a RING domain containing protein BRIZ1. BRIZ1 (At2g42160) and BRIZ2 (At2g26000) proteins form a heteromeric E3 ligase complex required for seed germination and post-germination growth.","BRAP2 RING ZNF UBP DOMAIN-CONTAINING PROTEIN 1 (BRIZ1)","BRAP2 RING ZNF UBP DOMAIN-CONTAINING PROTEIN 1 (BRIZ1)"]
["AT4G18710","green","Encodes BIN2, a member of the ATSK (shaggy-like kinase) family. BIN2 functions in the cross-talk between auxin and brassinosteroid signaling pathways. BIN2 regulates root epidermal cell fate specification by phosphorylating EGL3 and TTG1. BIN2-mediated phosphorylation appears to promote BZR1 export from the nucleus. KIB1 interacts with BIN2 blocking its interaction with substrates and promotes BIN2 degradation. Additionally, BIN2 phosphorylates RAPTOR1B and by doing so, releases the RAPTOR1B's repression of the autophagy pathway.","BRASSINOSTEROID-INSENSITIVE 2 (BIN2)","BRASSINOSTEROID-INSENSITIVE 2 (BIN2);DWARF 12 (DWF12);ULTRACURVATA 1 (UCU1);SHAGGY-LIKE KINASE 21 (ATSK21);SHAGGY-LIKE KINASE 21 (SK21)"]
["AT4G35230","green","Encodes BR-signaling kinase 1 (BSK1), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized.","BRASSINOSTEROID-SIGNALING KINASE 1 (BSK1)","BRASSINOSTEROID-SIGNALING KINASE 1 (BSK1)"]
["AT3G01770","green","Bromodomain protein that functions as a negative regulator of sugar and ABA signaling.","BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 10 (BET10)","BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 10 (ATBET10);BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 10 (BET10);GLOBAL TRANSCRIPTION FACTOR GROUP E 11 (GTE11)"]
["AT1G20670","green","DNA-binding bromodomain-containing protein, interacts with core SWI/SNF complex components.","BROMODOMAIN-CONTAINING PROTEIN 1 (BRD1)","BROMODOMAIN-CONTAINING PROTEIN 1 (BRD1)"]
["AT3G06190","green","Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1), AT3G06190 (BPM2), AT2G39760 (BPM3), AT3G03740 (BPM4), AT5G21010 (BPM5) and AT3G43700 (BPM6).","BTB-POZ AND MATH DOMAIN 2 (BPM2)","BTB-POZ AND MATH DOMAIN 2 (ATBPM2);BTB-POZ AND MATH DOMAIN 2 (BPM2)"]
["AT3G17590","green","Encodes the Arabidopsis homologue of yeast SNF5 and represents a conserved subunit of plant SWI/SNF complexes.Component of MINU-associated SWI/SNF complex, aka MAS complex (PMID: 36189880, PMID:36471048)","BUSHY GROWTH (BSH)","BUSHY GROWTH (BSH); (CHE1);TCP DOMAIN PROTEIN 21 (TCP21); (ATTCP21)"]
["AT1G18890","green","encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro.","CALCIUM-DEPENDENT PROTEIN KINASE 1 (CDPK1)","CALCIUM-DEPENDENT PROTEIN KINASE 1 (ATCDPK1); (CPK10);CALCIUM-DEPENDENT PROTEIN KINASE 1 (CDPK1); (AtCPK10)"]
["AT3G16940","green","Calmodulin binding transcription factor. Mutants display increased salt tolerance during early germination. Involved in regulation of salt stress responsive genes.","CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 6 (CAMTA6)","CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 6 (CAMTA6)"]
["AT3G20410","green","calmodulin-domain protein kinase CDPK isoform 9 (CPK9)","CALMODULIN-DOMAIN PROTEIN KINASE 9 (CPK9)","CALMODULIN-DOMAIN PROTEIN KINASE 9 (CPK9)"]
["AT3G56690","green","encodes a protein similar to ATPases and binds to calmodulin in vitro. This is a single-copy gene and is expressed in all tissues examined.","CAM INTERACTING PROTEIN 111 (CIP111)","CAM INTERACTING PROTEIN 111 (CIP111)"]
["AT1G71790","green","Encodes a heterodimeric actin binding protein composed of an alpha and a beta sumunit. Stabilizes actin filament cytoskeleton by capping.","CAPPING PROTEIN B (CPB)","CAPPING PROTEIN B (CPB); (ATCPB)"]
["AT1G29900","green","Encodes carbamoyl phosphate synthetase (CPS) large subunit (CARB), also named as VEN3. Heterologous expression of the Arabidopsis VEN3 and VEN6 genes in a CPS-deficient Escherichia coli strain fully restored bacterial growth in minimal medium, demonstrating the enzymatic activity of the VEN3 and VEN6 proteins.","CARBAMOYL PHOSPHATE SYNTHETASE B (CARB)","CARBAMOYL PHOSPHATE SYNTHETASE B (CARB);CELLULOSE SYNTHASE LIKE B6 (CLSB6);VENOSA 3 (VEN3)"]
["AT3G60250","green","Regulatory (beta) subunit of the protein kinase CK2. Involved in regulation of the circadian clock in Arabidopsis","CASEIN KINASE II BETA CHAIN 3 (CKB3)","CASEIN KINASE II BETA CHAIN 3 (CKB3)"]
["AT4G28880","green","Member of CKL gene family (CKL-A group)","CASEIN KINASE I-LIKE 3 (ckl3)","CASEIN KINASE I-LIKE 3 (ckl3)"]
["AT2G28910","green","Encodes a CAX-interacting protein (CXIP4). The gene product is located in the nucleus of GFP-CXIP4-expressing yeast cells. When transiently expressed in the tobacco leaves, GFP-CXIP4 locates to the nucleus as well as in discrete areas of the cytoplasm (which do not overlap with mitochondria).","CAX INTERACTING PROTEIN 4 (CXIP4)","CAX INTERACTING PROTEIN 4 (CXIP4)"]
["AT4G18700","green","Encodes CBL-interacting protein kinase 12 (CIPK12).","CBL-INTERACTING PROTEIN KINASE 12 (CIPK12)","CBL-INTERACTING PROTEIN KINASE 12 (CIPK12);SNF1-RELATED PROTEIN KINASE 3.9 (SnRK3.9);WPL4-LIKE 4 (ATWL4);WPL4-LIKE 4 (WL4);PROTEIN KINASE 8 (PKS8)"]
["AT5G10860","green","Encodes a single cystathionine beta-Synthase domain-containing protein. Modulates development by regulating the thioredoxin system.","CBS DOMAIN CONTAINING PROTEIN 3 (CBSX3)","CBS DOMAIN CONTAINING PROTEIN 3 (CBSX3)"]
["AT2G16940","green","Splicing factor which interacts with IRR and SR45 to mediate pre-mRNA splicing to facilitate protein function, however not contributing to target specificity.","CC1- LIKE SPLICING FACTOR (CC1)","CC1- LIKE SPLICING FACTOR (CC1)"]
["AT1G80780","green","Deadenylase.","CCR4-ASSOCIATED FACTOR 1J (CAF1J)","CCR4-ASSOCIATED FACTOR 1J (CAF1J)"]
["AT1G50180","green","Host immune receptor which recognizes the conserved effectors AvrE and HopAA1.","CEL-ACTIVATED RESISTANCE 1 (CAR1)","CEL-ACTIVATED RESISTANCE 1 (CAR1)"]
["AT3G09840","green","Encodes a cell division cycle protein, a member of AAA-type ATPases gene family. Expressed throughout the plant in regions of cell division. Within the cell, sub-cellular localization varies depending on the stage of the cell cycle.Mutants in which the expression of CDC48A is altered show defects in cytokinesis, cell expansion and cell differentiation. The mRNA is cell-to-cell mobile.","(CDC48A)","CELL DIVISION CYCLE 48 (CDC48); (ATCDC48A); (CDC48A); (ATCDC48)"]
["AT5G03340","green","ATPase, AAA-type, CDC48 protein;(source:Araport11)","CELL DIVISION CYCLE 48C (ATCDC48C)","CELL DIVISION CYCLE 48C (ATCDC48C)"]
["AT1G29770","green","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)",null,"CELLULOSE SYNTHASE LIKE D1 (CLSD1)"]
["AT2G33100","green","encodes a gene similar to cellulose synthase","CELLULOSE SYNTHASE-LIKE D1 (CSLD1)","CELLULOSE SYNTHASE-LIKE D1 (ATCSLD1);CELLULOSE-SYNTHASE LIKE D1 (CSLD1);CELLULOSE SYNTHASE-LIKE D1 (CSLD1)"]
["AT5G26360","green","TCP-1/cpn60 chaperonin family protein;(source:Araport11)","CHAPERONIN CONTAINING T-COMPLEX POLYPEPTIDE-1 SUBUNIT 3 (CCT3)","CHAPERONIN CONTAINING T-COMPLEX POLYPEPTIDE-1 SUBUNIT 3 (CCT3)"]
["AT1G05750","green","Encodes a pentatricopeptide repeat protein required for editing of rpoA and clpP chloroplast transcripts.","PIGMENT DEFECTIVE 247 (PDE247)","CHLOROPLAST BIOGENESIS 19 (CLB19);PIGMENT DEFECTIVE 247 (PDE247)"]
["AT2G02090","green","SNF2 domain-containing protein / helicase domain-containing protein;(source:Araport11)","(ETL1)","CHROMATIN REMODELING 19 (CHR19); (CHA19); (ETL1)"]
["AT4G25990","green","chloroplast import apparatus CIA2-like. CIA2 is a transcription factor which upregulates chloroplast translocon genes","CIA2-LIKE (CIL)","CIA2-LIKE (CIL)"]
["AT2G17570","green","Cis&#8208;prenyltransferase involved in dolichol accumulation.","CIS-PRENYLTRANSFERASE 1 (CPT1)","CIS-PRENYLTRANSFERASE 1 (CPT1); (ATCPT1);CIS&#8208;PRENYLTRANSFERASE 3 (CPT3)"]
["AT2G23070","green","Encodes a chloroplast localized subunit of casien kinase4. Functions reduntantly with other alpha subunits (1, 2,and 3) in ABA mediated suppression of seed germination, lateral root development and flowering time.","CK2 ALPHA CP (CKA4)","CK2 ALPHA CP (CKA4); (CPCK2);CASEIN KINASE 2 (PCK2)"]
["AT5G60950","green","COBRA-like protein 5 precursor;(source:Araport11)","COBRA-LIKE PROTEIN 5 PRECURSOR (COBL5)","COBRA-LIKE PROTEIN 5 PRECURSOR (COBL5)"]
["AT4G35600","green","Encodes a receptor-like cytoplasmic kinase that acts as a spatial inhibitor of cell separation. Analysis of the cDNA previously described in Meiners et al., 1991 revealed mistakes in the predicted open reading frame. The mRNA is cell-to-cell mobile.","CAST AWAY (CST)","CONNEXIN 32 (CX32);CAST AWAY (CST);KINASE 4 (KIN4);PBS1-LIKE 30 (PBL30)"]
["AT4G12560","green","Encodes CPR1 (Constitutive Expresser of PR Genes 1, also known as CPR30), a F-Box protein that functions as a negative regulator of defense response and targets resistance proteins.","CONSTITUTIVE EXPRESSER OF PR GENES 1 (CPR1)","CONSTITUTIVE EXPRESSER OF PR GENES 1 (CPR1);CONSTITUTIVE EXPRESSER OF PR GENES 30 (CPR30)"]
["AT5G42970","green","encodes subunit 4 of COP9 signalosome complex. sequence is similar to a subunit of the 19S regulatory particle of the 26S proteasome. recessive mutation causes derepression of photomorphogenesis.","CONSTITUTIVE PHOTOMORPHOGENIC 8 (COP8)","CONSTITUTIVE PHOTOMORPHOGENIC 8 (COP8);FUSCA 4 (FUS4);EMBRYO DEFECTIVE 134 (EMB134); (ATS4);COP9 SIGNALOSOME SUBUNIT 4 (CSN4);FUSCA 8 (FUS8);CONSTITUTIVE PHOTOMORPHOGENIC 14 (COP14)"]
["AT1G61620","green","Encodes a RING-finger E3 ubiquitin ligase that plays a major role in maintaining COP1 homeostasis by targeting COP1 for ubiquitination and degradation in dark-grown seedlings. The mRNA is cell-to-cell mobile.","COP1 SUPPRESSOR 1 (CSU1)","COP1 SUPPRESSOR 1 (CSU1)"]
["AT1G12520","green","Copper-zinc superoxide dismutase copper chaperone (delivers copper to the Cu-Zn superoxide dismutase). Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence. The AtACC activates all three CuZnSOD activities located in three different subcellular compartments. Contains three domains, central, ATX-1 like and C-terminal. ATX-1 like domain essential for the copper chaperone function of AtCCS in planta.","COPPER CHAPERONE FOR SOD1 (CCS)","COPPER CHAPERONE FOR SOD1 (ATCCS);COPPER CHAPERONE FOR SOD1 (CCS);HEAVY METAL ASSOCIATED PROTEIN 3 (ATHMP03)"]
["AT1G08760","green","CORD2 is a member of a novel and plant specific family of microtubule associated proteins. CORD1 binds microtubules via a conserved protein domain shared among family members. CORD functions may overlap;cord1 / cord2 mutants have defects in secondary cell wall pit morphology.","CORTICAL MICROTUBULE DISORDERING2 (CORD2)","CORTICAL MICROTUBULE DISORDERING2 (CORD2)"]
["AT1G04400","green","Blue light receptor mediating blue-light regulated cotyledon expansion and flowering time. Positive regulator of the flowering-time gene CONSTANS. This gene possesses a light-induced CNT2 N-terminal homodimerisation domain.Involved in blue-light induced stomatal opening. Involved in triggering chromatin decondensation. An 80-residue motif (NC80) is sufficient to confer CRY2's physiological function. It is proposed that the PHR domain and the C-terminal tail of the unphosphorylated CRY2 form a \"closed\" conformation to suppress the NC80 motif in the absence of light. In response to blue light, the C-terminal tail of CRY2 is phosphorylated and electrostatically repelled from the surface of the PHR domain to form an \"open\" conformation, resulting in derepression of the NC80 motif and signal transduction to trigger photomorphogenic responses. Cry2 phosphorylation and degradation both occur in the nucleus.The life-time of cry2 signaling state in situ (in planta) is about 16 min.","CRYPTOCHROME 2 (CRY2)","CRYPTOCHROME 2 (CRY2); (FHA); (AT-PHH1); (PHH1); (ATCRY2)"]
["AT4G02570","green","Encodes a cullin that is a component of SCF ubiquitin ligase complexes involved in mediating responses to auxin and jasmonic acid. Homozygous auxin-resistant mutants arrest growth soon after germination, lacking a root and hypocotyl. Heterozygotes display a variety of phenotypes consistent with impaired auxin response.","CULLIN 1 (CUL1)","CULLIN 1 (ATCUL1);CULLIN 1 (CUL1);AUXIN RESISTANT 6 (AXR6);INCURVATA 13 (ICU13); (ETA1)"]
["AT1G67580","green","Cyclin dependent kinase. Regulates stress responses and FLOWERING LOCUS M mRNA splicing. Acts downstream of UBP14/DA3-CDKB1;1 in control of endoreduplication and cell growth pathway.","CYCLIN-DEPENDENT KINASE G2 (CDKG2)","CYCLIN-DEPENDENT KINASE G2 (CDKG2)"]
["AT5G23040","green","Encodes a protein that enables protochlorophillide's binding to pPORA's transit sequence, regulating pPORA's translocation into the plastid stroma, and blocking movement of the translocating polypeptide chain back into the cytosol. Causes Bax mediated lethality in yeast by generating reactive oxygen species and this effect is suppressed by AtBI-1.","CELL GROWTH DEFECT FACTOR 1 (CDF1)","CYCLING DOF FACTOR 1 (CDF1);CHAPERONE-LIKE PROTEIN OF POR1 (CPP1);CELL GROWTH DEFECT FACTOR 1 (CDF1)"]
["AT1G53720","green","Encodes a cyclophilin, member of a family modular proteins consisting of a peptidyl-prolyl cis? trans isomerase (PPIase) domain, followed by an RNA recognition motif (RRM), and a C-terminal domain enriched in charged amino acids. Interacts with with SCL33/SR33 and with a majority of Arabidopsis SR proteins and the largest subunit of RNA polymerase II. Localizes to the nucleus, but it does not significantly colocalize with SR proteins in nuclear speckles.","CYCLOPHILIN 59 (CYP59)","CYCLOPHILIN 59 (ATCYP59);CYCLOPHILIN 59 (CYP59)"]
["AT3G44600","green","Cyclophilin71 is a WD40 domain cyclophilin, which functions in gene repression, organogenesis and meristem development. CYP71 physically interacts with histone H3.","CYCLOPHILIN 71 (CYP71)","CYCLOPHILIN 71 (CYP71); (ATCYP71)"]
["AT1G70520","green","Encodes a cysteine-rich receptor-like protein kinase located to the plasma membrane. Involved in regulating microbe-associated molecular pattern-triggered ROS production and stress induced callose deposition at the plasmodesmata in roots. Required for MAMP-triggered responses and resistance to Pseudomonas syringae pv. tomato 118 DC3000 .","CYSTEINE-RICH RLK2 (CRK2)","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 2 (CRK2);ALTERED SEED GERMINATION 6 (ASG6);CYSTEINE-RICH RLK2 (CRK2)"]
["AT5G45040","green","Encodes a Class I cytochrome c family member possessing a high structural homology with photosynthetic cytochrome c(6) from cyanobacteria, but structurally and functionally distinct through the presence of a disulfide bond.","CYTOCHROME C6A (CYTC6A)","CYTOCHROME C6A (CYTC6A)"]
["ATMG00160","green","cytochrome c oxidase subunit 2","CYTOCHROME OXIDASE 2 (COX2)","CYTOCHROME OXIDASE 2 (COX2)"]
["AT3G53280","green","cytochrome P450 monooxygenase The mRNA is cell-to-cell mobile.","CYTOCHROME P450 71B5 (CYP71B5)","CYTOCHROME P450 71B5 (CYP71B5)"]
["AT3G20130","green","Encodes a member of the CYP705A family of cytochrome P450 enzymes. Mutants show altered gravitropic responses.","CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 22 (CYP705A22)","CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 22 (CYP705A22);GRAVITY PERSISTENCE SIGNAL 1 (GPS1)"]
["AT1G50520","green","member of CYP705A The mRNA is cell-to-cell mobile.","CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 27 (CYP705A27)","CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 27 (CYP705A27)"]
["AT4G12300","green","member of CYP706A","CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 4 (CYP706A4)","CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 4 (CYP706A4)"]
["AT5G25130","green","putative cytochrome P450 The mRNA is cell-to-cell mobile.","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 12 (CYP71B12)","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 12 (CYP71B12)"]
["AT4G27950","green","Encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. CRF proteins relocalize to the nucleus in response to cytokinin.","CYTOKININ RESPONSE FACTOR 4 (CRF4)","CYTOKININ RESPONSE FACTOR 4 (CRF4)"]
["AT4G26150","green","Encodes a member of the GATA factor family of zinc finger transcription factors. Modulate chlorophyll biosynthesis and glutamate synthase (GLU1/Fd-GOGAT) expression.","CYTOKININ-RESPONSIVE GATA FACTOR 1 (CGA1)","CYTOKININ-RESPONSIVE GATA FACTOR 1 (CGA1);GATA TRANSCRIPTION FACTOR 22 (GATA22);GNC-LIKE (GNL)"]
["AT4G35910","green","Encodes a cytoplasmic thiouridylase that is essential for tRNA thiolation. Its activity appears to be important in root development.","CYTOPLASMIC THIOURIDYLASE 2 (CTU2)","CYTOPLASMIC THIOURIDYLASE 2 (CTU2)"]
["AT4G21100","green","One of two closely related genes similar to a damaged DNA binding protein originally described in mammals. May form a complex with DET1 to regulate photomorphogenesis. Loss of function mutations are lethal. The DDB1b protein binds with a number of DWD-containing proteins and may form part of a CUL4-based E3 ubiquitin ligase.","DAMAGED DNA BINDING PROTEIN 1B (DDB1B)","DAMAGED DNA BINDING PROTEIN 1B (DDB1B)"]
["AT5G58120","green","DM10 is a singleton TIR-NLR, and causal QTL responsible for severe hybrid necrosis.","DANGEROUS MIX 10 (DM10)","DANGEROUS MIX 10 (DM10)"]
["AT3G42170","green","transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner.","DAYSLEEPER (DAYSLEEPER)","DAYSLEEPER (DAYSLEEPER)"]
["AT1G26110","green","Encodes Decapping 5, required for mRNA decapping, P-body formation and translational repression during postembryonic development.","DECAPPING 5 (DCP5)","DECAPPING 5 (DCP5)"]
["AT5G61590","green","Encodes an AP2/ERF-type transcription factor that is preferentially expressed in the epidermis and induced by darkness and negatively regulates cuticular wax biosynthesis.","DECREASE WAX BIOSYNTHESIS (DEWAX)","DECREASE WAX BIOSYNTHESIS (DEWAX); (ERF107)"]
["AT4G10180","green","Encodes a nuclear-localized protein that acts as a repressor of photomorphogenesis and may be involved in chromatin remodeling. The mRNA is cell-to-cell mobile.","DE-ETIOLATED 1 (DET1)","DE-ETIOLATED 1 (DET1);FUSCA 2 (FUS2); (ATDET1)"]
["AT4G13395","green","ROTUNDIFOLIA like 12;(source:Araport11)","ROTUNDIFOLIA LIKE 12 (RTFL12)","DEVIL 10 (DVL10);ROTUNDIFOLIA LIKE 12 (RTFL12)"]
["AT5G05980","green","Encodes one of the three folylpolyglutamate synthetase isoforms (FPGSs): FPGS1 (At5g05980, plastidic), FPGS2 (At3g10160, mitochondrial) and FPGS3 (At3g55630, cytosolic).","DHFS-FPGS HOMOLOG B (DFB)","DHFS-FPGS HOMOLOG B (ATDFB);FOLYLPOLYGLUTAMATE SYNTHETASE 1 (FPGS1);DHFS-FPGS HOMOLOG B (DFB)"]
["AT3G55630","green","Encodes one of the three folylpolyglutamate synthetase isoforms (FPGSs): FPGS1 (At5g05980, plastidic), FPGS2 (At3g10160, mitochondrial) and FPGS3 (At3g55630, cytosolic).","DHFS-FPGS HOMOLOG D (DFD)","DHFS-FPGS HOMOLOG D (ATDFD);DHFS-FPGS HOMOLOG D (DFD);FOLYLPOLYGLUTAMATE SYNTHETASE 3 (FPGS3)"]
["AT5G20320","green","Encodes an RNase III-like enzyme that catalyzes processing of trans-acting small interfering RNA precursors in a distinct small RNA biogenesis pathway. The protein is also involved in the production of 21-nt primary siRNAs from both inverted-repeat constructs and endogenous sequences, as well as the RDR6-dependent 21-nt secondary siRNAs involved in long-range cell-to-cell signaling. It binds DRB4, a ds-RNA binding protein.","DICER-LIKE 4 (DCL4)","DICER-LIKE 4 (ATDCL4);DICER-LIKE 4 (DCL4)"]
["AT5G06580","green","Encodes a protein with glycolate dehydrogenase activity, which was shown to complement various subunits of the E. coli glycolate oxidase complex. It has not been ruled out that the enzyme might be involved in other catalytic activities in vivo.","D-LACTATE DEHYDROGENASE (D-LDH)","D-LACTATE DEHYDROGENASE (D-LDH)"]
["AT5G60050","green","BTB/POZ domain-containing protein;(source:Araport11)","DNA DAMAGE RESPONSE MUTANT 2 (DUPLICATE) (DDRM2)","DNA DAMAGE RESPONSE MUTANT 2 (DUPLICATE) (DDRM2)"]
["AT1G79730","green","Encodes a PAF1 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast PAF1 is a component of a five-member complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5'] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin. Together with SMC5/6-UBC1/2-HUB1/2 and acting as the core subunit of PAF1C, it is implicated in DSB repair through homologous recombination.","EARLY FLOWERING 7 (ELF7)","DNA DAMAGE RESPONSE MUTANT 4 (DDRM4); (PAF1);EARLY FLOWERING 7 (ELF7)"]
["AT5G55300","green","Encodes a type-I DNA topoisomerase I. Disruptions in this gene affect phyllotaxis and plant architecture suggesting that the gene plays a critical role in the maintenance of a regular pattern of organ initiation. Isolated as a protein oxidized during seed germination; proteomics approach revealed differences in de novo synthesis levels of this protein in condition with vs. without salicylic acid in the period from 0 to 40 hrs. following seed imbibition. Functions in stem cell maintenance at all stages of shoot and floral meristems and in the regulation of gene silencing.","DNA TOPOISOMERASE I ALPHA (TOP1ALPHA)","DNA TOPOISOMERASE I ALPHA (TOP1ALPHA);FASCIATA5 (FAS5)"]
["AT3G04880","green","encodes a novel protein involved in DNA repair from UV damage. Isolated by functional complementation of E. coli UV-sensitive mutants (UVR genes).","DNA-DAMAGE-REPAIR/TOLERATION 2 (DRT102)","DNA-DAMAGE-REPAIR/TOLERATION 2 (DRT102)"]
["AT5G22060","green","Co-chaperonin similar to E. coli DnaJ","DNAJ HOMOLOGUE 2 (J2)","DNAJ HOMOLOGUE 2 (J2);ARABIDOPSIS THALIANA DNAJ HOMOLOGUE 2 (ATJ2)"]
["AT2G33830","green","Negative regulator of local and systemic acquired resistance; target of FLD for activation of SAR.","DORMANCY ASSOCIATED GENE 2 (DRM2)","DORMANCY/AUXIN ASSOCIATED FAMILY PROTEIN 2( (DAP2); (ATDRM2);DORMANCY ASSOCIATED GENE 2 (DRM2)"]
["AT5G05410","green","Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress?inducible genes. The mRNA is cell-to-cell mobile.","DRE-BINDING PROTEIN 2A (DREB2A)","DRE-BINDING PROTEIN 2A (DREB2A);DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2 (DREB2)"]
["AT1G09710","green","Paralog of DRMY1 with unknown function.","DRMY1 PARALOG 1 (DP1)","DRMY1 PARALOG 1 (DP1)"]
["AT4G33650","green","Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B.","DYNAMIN-RELATED PROTEIN 3A (DRP3A)","DYNAMIN-RELATED PROTEIN 3A (DRP3A);ABERRANT PEROXISOME MORPHOLOGY 1 (APEM1);NON RESPONDING TO OXYLIPINS 15 (NOXY15)"]
["AT5G19180","green","Encodes a subunit of a RUB-activating enzyme analogous to the E1 ubiquitin-activating enzyme. ECR1 functions as a heterodimer with AXR1 to activate RUB, a ubiquitin-related protein.","E1 C-TERMINAL RELATED 1 (ECR1)","E1 C-TERMINAL RELATED 1 (ECR1)"]
["AT2G25930","green","Encodes a nuclear protein that is expressed rhythmically and interacts with phytochrome B to control plant development and flowering through a signal transduction pathway. Required component of the core circadian clock regardless of light conditions.","EARLY FLOWERING 3 (ELF3)","EARLY FLOWERING 3 (ELF3); (PYK20)"]
["AT2G40080","green","Encodes a novel nuclear 111 amino-acid phytochrome-regulated component of a negative feedback loop involving the circadian clock central oscillator components CCA1 and LHY. ELF4 is necessary for light-induced expression of both CCA1 and LHY, and conversely, CCA1 and LHY act negatively on light-induced ELF4 expression. ELF4 promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. It is involved in the phyB-mediated constant red light induced seedling de-etiolation process and may function to coregulate the expression of a subset of phyB-regulated genes.","EARLY FLOWERING 4 (ELF4)","EARLY FLOWERING 4 (ELF4)"]
["AT2G39810","green","A novel protein with a RING finger motif near the amino terminus. Negative regulator of cold responses. Functions as an E3 ligase required for the ubiquitination of ICE1. HOS1 physically interacts with ICE1 and mediates the ubiquitination of ICE1 both in vitro and in vivo. Overexpression represses the expression of CBFs and their downstream genes and confers increased sensitivity to freezing stress. The mRNA is cell-to-cell mobile.","HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (HOS1)","EARLY IN SHORT DAYS 6 (ESD6);HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (HOS1)"]
["AT1G18330","green","EARLY-PHYTOCHROME-RESPONSIVE1","EARLY-PHYTOCHROME-RESPONSIVE1 (EPR1)","EARLY-PHYTOCHROME-RESPONSIVE1 (EPR1);REVEILLE 7 (RVE7)"]
["AT2G17840","green","Identified as drought-inducible gene by differential hybridization. Upregulated by high light, drought, cold and salt stress determined by microarray analysis.","EARLY-RESPONSIVE TO DEHYDRATION 7 (ERD7)","EARLY-RESPONSIVE TO DEHYDRATION 7 (ERD7)"]
["AT1G05960","green","Part of a nanodomain complex that tethers PI4K&#945;1 to the plasma membrane.","EFR3 OF PLANT 3 (EFOP3)","EFR3 OF PLANT 3 (EFOP3)"]
["AT5G50320","green","A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1?ELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate. Two lines with RNAi constructs directed against HAG3 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.","ELONGATA 3 (ELO3)","ELONGATA 3 (ELO3);HISTONE ACETYLTRANSFERASE OF THE GNAT FAMILY 3 (HAG3);ENHANCER-OF-ASYMMETRIC LEAVES-TWO 1 (EAST1);ELONGATOR PROTEIN 3 (ELP3);ELONGATOR PROTEIN 3 (AtELP3);HISTONE ACETYLTRANSFERASE 8 (HAC8)"]
["AT1G55540","green","Nuclear pore complex protein;(source:Araport11)","LONO 1 (LNO1)","EMBRYO DEFECTIVE 1011 (emb1011);LONO 1 (LNO1)"]
["AT1G43710","green","Encodes a serine decarboxylase that is involved in ethanolamine metabolism and is crucial for plant growth.","EMBRYO DEFECTIVE 1075 (emb1075)","EMBRYO DEFECTIVE 1075 (emb1075);SERINE DECARBOXYLASE 1 (SDC1);ARABIDOPSIS THALIANA SERINE DECARBOXYLASE 1 (ATSDC1)"]
["AT1G79350","green","Encodes the Arabidopsis thaliana orthologue of metazoan Strawberry notch, a highly conserved co-activator of the developmental regulator Notch. It mediates stress-induced chromatin memory by modulating nucleosome occupancy by interacting with chromatin remodeling proteins of the ISWI and SWI/SNF classes.","EMBRYO DEFECTIVE 1135 (EMB1135)","EMBRYO DEFECTIVE 1135 (EMB1135);FORGETTER 1 (FGT1)"]
["AT1G20960","green","Similar to DEAD/DExH box ATP-dependent RNA helicase . Required for proper splicing of FLC. Mutants have reduced FLC levels and are early flowering.","EMBRYO DEFECTIVE 1507 (emb1507)","EMBRYO DEFECTIVE 1507 (emb1507); (BRR2); (BRR2A)"]
["AT1G10510","green","RNI-like superfamily protein;(source:Araport11)","EMBRYO DEFECTIVE 2004 (emb2004)","EMBRYO DEFECTIVE 2004 (emb2004)"]
["AT3G18290","green","Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. The mRNA is cell-to-cell mobile.","BRUTUS (BTS)","EMBRYO DEFECTIVE 2454 (EMB2454);BRUTUS (BTS)"]
["AT5G67570","green","Encodes a pentratricopeptide repeat containing protein that is targeted to the chloroplast. Mutants have pale young leave and reduced accumulation of plastid encoded transcripts suggesting a role for DG1 in regulation of plastid gene expression.","DELAYED GREENING 1 (DG1)","EMBRYO DEFECTIVE 246 (EMB246);THERMO SENSITIVE LEAF COLOR 1 (TSL1);EMBRYO DEFECTIVE 1408 (EMB1408);DELAYED GREENING 1 (DG1)"]
["AT2G41720","green","Encodes a pentatricopeptide repeat protein that is essential for trans-splicing of a chloroplast small ribosomal subunit transcript.","EMBRYO DEFECTIVE 2654 (EMB2654)","EMBRYO DEFECTIVE 2654 (EMB2654)"]
["AT5G06240","green","embryo defective 2735;(source:Araport11)","EMBRYO DEFECTIVE 2735 (emb2735)","EMBRYO DEFECTIVE 2735 (emb2735)"]
["AT2G38770","green","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","EMBRYO DEFECTIVE 2765 (EMB2765)","EMBRYO DEFECTIVE 2765 (EMB2765);MOS4-ASSOCIATED COMPLEX 7 (MAC7)"]
["AT2G45000","green","Encodes a nucleoporin, a component of the nuclear pore complex, that appears to be a major negative regulator of auxin signalling. Loss of function mutants are embryo lethal.","EMBRYO DEFECTIVE 2766 (EMB2766)","EMBRYO DEFECTIVE 2766 (EMB2766);NUCLEOPORIN 62 (NUP62); (ATNUP62)"]
["AT3G13200","green","Associates with core components of the Arabidopsis NineTeen complex (NTC) and its loss leads to inefcient splicing.","EMBRYO DEFECTIVE 2769 (EMB2769)","EMBRYO DEFECTIVE 2769 (EMB2769); (CWC15)"]
["AT3G10220","green","Encodes a tubulin-binding cofactor. Homozygous mutant plants are embryo lethal. Heterozygous mutant plants showed increased ploidy and higher numbers of spindles and phragmoplasts, suggesting a role in cell division. The mRNA is cell-to-cell mobile.","EMBRYO DEFECTIVE 2804 (EMB2804)","EMBRYO DEFECTIVE 2804 (EMB2804); (TFCB)"]
["AT5G08470","green","an AAA-ATPase that is the probable Arabidopsis orthologue of one of the AAA-ATPases involved in peroxisome biogenesis in yeasts and mammals.","PEROXISOME 1 (PEX1)","EMBRYO DEFECTIVE 2817 (EMB2817);PEROXISOME 1 (PEX1)"]
["AT1G05600","green","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","EMBRYO DEFECTIVE 3101 (EMB3101)","EMBRYO DEFECTIVE 3101 (EMB3101)"]
["AT2G01390","green","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","EMBRYO DEFECTIVE 3111 (EMB3111)","EMBRYO DEFECTIVE 3111 (EMB3111)"]
["AT5G51200","green","Originally identified as EDS4, enhanced disease sensitive phenotype and subsequently cloned and identified as NUCLEOPORIN205. Affects circadian clock and downstream genes including those involved in defense response.","EMBRYO DEFECTIVE 3142 (EMB3142)","EMBRYO DEFECTIVE 3142 (EMB3142)"]
["AT1G01960","green","Encodes one of the functionally redundant ARF guanine-nucleotide exchange factors (ARF-GEFs). Functions as regulators of post-Golgi trafficking.","EMBRYO SAC DEVELOPMENT ARREST 10 (EDA10)","EMBRYO SAC DEVELOPMENT ARREST 10 (EDA10);BIG3 (BIG3)"]
["AT4G02440","green","EID1 is an F-box protein that functions as a negative regulator in phytochrome A (phyA)-specific light signalling. Expressed at all stages of plant development independently of light conditions, localizes to the nucleus, and forms nuclear speckles under continuous far-red light. Forms stable dimeric and trimeric complexes with several ASK proteins and Cullin1 in yeast and in planta.","EMPFINDLICHER IM DUNKELROTEN LICHT 1 (EID1)","EMPFINDLICHER IM DUNKELROTEN LICHT 1 (EID1)"]
["AT3G07100","green","Encodes SEC24a/ERMO2. Required for endoplasmic reticulum (ER) morphology. Has epistatic interactions with AT1G55350, AT3G59420, and AT3G10525.","ENDOPLASMIC RETICULUM MORPHOLOGY 2 (ERMO2)","ENDOPLASMIC RETICULUM MORPHOLOGY 2 (ERMO2); (SEC24A); (AtSEC24A)"]
["AT5G17400","green","This gene is predicted to encode an ER-localized adenine nucleotide transporter with six putative transmembrane helices. It appears to act as a ATP:ADP antiporter when expressed in E.coli plasma membranes. Transcript levels for several ER-localized chaperones (e.g. BIP1/2) and other ATP-requiring ER proteins (e.g. CPK2) are reduced in er-ant1 knock-out lines, suggesting a lack of adequate ATP transport into the ER in these mutants. They also have reduced seed oil and seed protein levels.","ENDOPLASMIC RETICULUM-ADENINE NUCLEOTIDE TRANSPORTER 1 (ER-ANT1)","ENDOPLASMIC RETICULUM-ADENINE NUCLEOTIDE TRANSPORTER 1 (ER-ANT1)"]
["AT1G08720","green","enhanced disease resistance 1 (EDR1) confers resistance to powdery mildew disease caused by the fungus Erysiphe cichoracearum The mRNA is cell-to-cell mobile.","ENHANCED DISEASE RESISTANCE 1 (EDR1)","ENHANCED DISEASE RESISTANCE 1 (EDR1); (ATEDR1)"]
["AT2G01480","green","ESMD1 is a golgi localized putative O-fucosyltransferase.","ESMERALDA1 (ESMD1)","ESMERALDA1 (ESMD1)"]
["AT2G21800","green","Forms a complex with MUS81 that functions as endonuclease in DNA recombination and repair processes.","ESSENTIAL MEIOTIC ENDONUCLEASE 1A (EME1A)","ESSENTIAL MEIOTIC ENDONUCLEASE 1A (EME1A)"]
["AT4G17490","green","Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-6). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. It is involved in the response to reactive oxygen species and light stress. Involved in regulating root architecture and the response to cold stress.","ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6 (ERF6)","ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6 (ATERF6); (ERF-6-6);ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6 (ERF6); (ERF103)"]
["AT1G17870","green","S2P-like putative metalloprotease, also contain transmembrane helices near their C-termini and many of them, five of seven, contain a conserved zinc-binding motif HEXXH. Homolog of EGY1. Each of the EGY1 and EGY-like proteins share two additional highly conserved motifs, the previously reported NPDG motif (aa 442?454 in EGY1, Rudner et al., 1999) and a newly defined GNLR motif (aa 171?179 in EGY1). The GNLR motif is a novel signature motif unique to EGY1 and EGY-like proteins as well as other EGY1 orthologs found in cyanobacteria. Mediates chloroplastic ROS homeostasis and promotes retrograde signaling in response to salt stress.","ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 3 (EGY3)","ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 3 (ATEGY3);ETHYLENE-DEPENDENT GRAVITROPISM-DEFICIENT AND YELLOW-GREEN-LIKE 3 (EGY3)"]
["AT3G19760","green","Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles.","EUKARYOTIC INITIATION FACTOR 4A-III (EIF4A-III)","EUKARYOTIC INITIATION FACTOR 4A-III (EIF4A-III); (RH2)"]
["AT4G11420","green","Encodes a subunit of eukaryotic initiation factor 3 (eIF3), a multisubunit complex that is required for binding of mRNA to 40 S ribosomal subunits, stabilization of ternary complex binding to 40 S subunits, and dissociation of 40 and 60 S subunits.","EUKARYOTIC TRANSLATION INITIATION FACTOR 3A (EIF3A)","EUKARYOTIC TRANSLATION INITIATION FACTOR 3A (EIF3A); (ATEIF3A-1); (EIF3A-1); (ATTIF3A1); (TIF3A1)"]
["AT2G24050","green","Encodes a putative eukaryotic translation initiation factor.","EUKARYOTIC TRANSLATION INITIATION FACTOR ISOFORM 4G2 (eIFiso4G2)","EUKARYOTIC TRANSLATION INITIATION FACTOR ISOFORM 4G2 (eIFiso4G2)"]
["AT5G61020","green","YTHDF protein which togeteher with ECT2 and ECT4 is involved in cell proliferation during plant organogenesis.","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 3 (ECT3)","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 3 (ECT3)"]
["AT1G27510","green","Encodes one of the two plastid proteins EXECUTER (EX1, AT4G33630) and EX2 (AT1G27510). Mediates singlet oxygen induced programmed cell death.","EXECUTER 2 (EX2)","EXECUTER 2 (EX2);EXECUTER 2 (EXE2)"]
["AT4G33630","green","Encodes one of the two plastid proteins EXECUTER (EX1, AT4G33630) and EX2 (AT1G27510). Mediates singlet oxygen induced programmed cell death.","EXECUTER1 (EX1)","EXECUTER1 (EX1);EXECUTER1 (EXE1)"]
["AT5G58430","green","A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree. Targeted by AvrPtoB to manipulate the defense molecule secretion machinery.","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN B1 (EXO70B1)","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN B1 (EXO70B1);EXOCYST SUBUNIT EXO70 FAMILY PROTEIN B1 (ATEXO70B1)"]
["AT1G54090","green","A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN D2 (EXO70D2)","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN D2 (ATEXO70D2);EXOCYST SUBUNIT EXO70 FAMILY PROTEIN D2 (EXO70D2)"]
["AT5G42540","green","Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN2 acts as a suppressor of posttranscriptional gene silencing.","EXORIBONUCLEASE 2 (XRN2)","EXORIBONUCLEASE 2 (XRN2)"]
["AT3G15850","green","Chloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor. The mRNA is cell-to-cell mobile.","FATTY ACID DESATURASE 5 (FAD5)","FATTY ACID DESATURASE 5 (FAD5);FATTY ACID DESATURASE B (FADB); (JB67); (ADS3); (ATADS3)"]
["AT4G21510","green","F-box family protein; mutant is hypersensitive to salt stress.","F-BOX STRESS INDUCED 2 (FBS2)","F-BOX STRESS INDUCED 2 (FBS2); (ATFBS2)"]
["AT2G17036","green","F-box SKIP23-like protein (DUF295);(source:Araport11)","F-BOX/DUF295 ANCESTRAL 12 (ATFDA12)","F-BOX/DUF295 ANCESTRAL 12 (ATFDA12)"]
["AT5G02150","green","Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150).","FES1C (Fes1C)","FES1C (Fes1C)"]
["AT3G26080","green","PAP/fibrillin (ECM1) localized to chloroplasts.","FIBRILLIN3B (FBN3B)","FIBRILLIN3B (FBN3B)"]
["AT3G27120","green","Encodes a conserved AAA-ATPase that acts as a negative regulator of meiotic CO formation.","FIDGETIN-LIKE 1 (FIGL1)","FIDGETIN-LIKE 1 (FIGL1)"]
["AT3G01560","green","proline-rich receptor-like kinase, putative (DUF1421);(source:Araport11)","FLOE3 (FLOE3)","FLOE3 (FLOE3)"]
["AT3G14750","green","structural maintenance of chromosomes domain protein;(source:Araport11)","FLX-LIKE 1 (FLL1)","FLX-LIKE 1 (FLL1)"]
["AT4G34450","green","Member of the Coat Protein I (COPI) complex is a seven-subunit coatomer complex consisting of the &#945;, &#946;, &#946;&#8242;, &#947;, &#948;, &#949;, and &#950; proteins. COPI is required for retrograde transport from the Golgi to the endoplasmic reticulum, Golgi maintenance, and cell plate formation.","GAMMA2 COAT PROTEIN (gamma2-COP)","GAMMA2 COAT PROTEIN (gamma2-COP)"]
["AT3G13222","green","Encodes a protein that binds to G-box binding transcription factors and enhances their binding affinities to G-box in vitro. This protein localizes to the nucleus and is expressed predominantly in the root.","GBF-INTERACTING PROTEIN 1 (GIP1)","GBF-INTERACTING PROTEIN 1 (GIP1)"]
["AT4G36730","green","member of a gene family encoding basic leucine zipper proteins (GBFs) which bind the G-box","G-BOX BINDING FACTOR 1 (GBF1)","G-BOX BINDING FACTOR 1 (GBF1); (ATGBF1)"]
["AT1G24040","green","Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11)","GCN5&#8208;RELATED N&#8208;ACETYLTRANSFERASE 5 (GNAT5)","GCN5&#8208;RELATED N&#8208;ACETYLTRANSFERASE 5 (GNAT5)"]
["AT5G14280","green","DNA-binding storekeeper-like protein;(source:Araport11)","GEBP-LIKE PROTEIN 2 (GPL2)","GEBP-LIKE PROTEIN 2 (GPL2)"]
["AT3G54540","green","ABCF4 is one of five members of the ABCF gene family in Arabidopsis, which are homologs of the yeast ABCF protein GCN20. AT3G54540 is not a homolog of the yeast bZIP transcription factor GCN4.","ATP-BINDING CASSETTE F4 (ABCF4)","GENERAL CONTROL NON-DEREPRESSIBLE 4 (GCN4);ATP-BINDING CASSETTE F4 (ABCF4);GENERAL CONTROL NON-DEREPRESSIBLE 4 (ATGCN4)"]
["AT5G64840","green","ABCF5 is one of five members of the ABCF gene family in Arabidopsis, which are homologs of the yeast ABCF protein GCN20.","ATP-BINDING CASSETTE F5 (ABCF5)","GENERAL CONTROL NONDEREPRESSIBLE 5 (GCN5);ATP-BINDING CASSETTE F5 (ABCF5);GENERAL CONTROL NON-REPRESSIBLE 5 (ATGCN5)"]
["AT4G32680","green","Similar to yeast GET2 encodes an ER localized transmembrane protein that interacts with GET1 receptor via its transmembrane domain.","GET1-INTERACTING PROTEIN (G1IP)","GET1-INTERACTING PROTEIN (G1IP); (GET2)"]
["AT5G10550","green","This gene is predicted to encode a bromodomain-containing protein. A plant line expressing RNAi constructs targeted against GTE7 shows some resistance to agrobacterium-mediated root transformation.","GLOBAL TRANSCRIPTION FACTOR GROUP E2 (GTE2)","GLOBAL TRANSCRIPTION FACTOR GROUP E2 (GTE2)"]
["AT2G48150","green","Encodes glutathione peroxidase.","GLUTATHIONE PEROXIDASE 4 (GPX4)","GLUTATHIONE PEROXIDASE 4 (ATGPX4);GLUTATHIONE PEROXIDASE 4 (GPX4); (GPXL4)"]
["AT1G16300","green","Encodes one of the chloroplast/plastid localized GAPDH isoforms (GAPCp1/At1g79530 and GAPCp2/At1g16300). gapcp double mutants display a drastic phenotype of arrested root development, dwarfism and sterility. GAPCps are important for the synthesis of serine in roots.","GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 2 (GAPCP-2)","GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE OF PLASTID 2 (GAPCP-2)"]
["AT1G79830","green","This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC5 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (139 aa) portion of the protein. The C-terminal portion of the protein can also specifically interact with two members of the Rab family of GTPases (RabH1b and RabH1c).","GOLGIN CANDIDATE 5 (GC5)","GOLGIN CANDIDATE 5 (GC5)"]
["AT5G18525","green","Encodes a BEACH domain containing protein that is involved in targeting storage proteins to the protein storage vacuoles and effector triggered immunity to Psuedomonas syringae.","GREEN FLUORESCENT SEED 12 (GFS12)","GREEN FLUORESCENT SEED 12 (GFS12)"]
["AT5G53440","green","Component of the m6A writer complex; HAKAI is required for the interaction between HIZ1 and MTA (mRNA adenosine methylase A). Likely the plant equivalent of ZC3H13 (Flacc) of the metazoan m6A-METTL Associated Complex. Retarded growth, reduced apical dominance and small and bushy rosette leaves; shorter primary roots and nearly no lateral roots; mutants have increased percentage of trichomes with more than three branches.","HAKAI-INTERACTING ZINC FINGER PROTEIN 2 (HIZ2)","HAKAI-INTERACTING ZINC FINGER PROTEIN 2 (HIZ2)"]
["AT1G79920","green","Heat shock protein 70 (Hsp 70) family protein;(source:Araport11)","HEAT SHOCK PROTEIN 70-15 (Hsp70-15)","HEAT SHOCK PROTEIN 70-15 (Hsp70-15); (AtHsp70-15)"]
["AT4G18880","green","Encodes a member of Heat Stress Transcription Factor(Hsf) family that is a substrate of the MPK3/MPK6 signaling and regulates stress responses.","HEAT SHOCK TRANSCRIPTION FACTOR A4A (HSF A4A)","HEAT SHOCK TRANSCRIPTION FACTOR A4A (HSF A4A);ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A4A (AT-HSFA4A)"]
["AT3G63350","green","member of Heat Stress Transcription Factor (Hsf) family","(AT-HSFA7B)","HEAT SHOCK TRANSCRIPTION FACTOR A7B (HSFA7B); (AT-HSFA7B)"]
["AT2G30800","green","Has RNA or DNA helicase activity and expressed specifically in tapetum and vascular tissue. First identified member of a new group of the mle helicase group of the DEAH family.","HELICASE IN VASCULAR TISSUE AND TAPETUM (HVT1)","HELICASE IN VASCULAR TISSUE AND TAPETUM (HVT1); (ATVT-1)"]
["AT3G15150","green","Encodes a SUMO E3 ligase that regulates endocycle onset and meristem maintenance.","HIGH PLOIDY2 (HPY2)","HIGH PLOIDY2 (HPY2);METHYL METHANE SULFONATE SENSITIVITY 2 (MMS21);A. THALIANA METHYL METHANE SULFONATE SENSITIVITY 21 (ATMMS21); (NSE2)"]
["AT4G38130","green","Encodes a histone deacetylase that enhances AtERF7-mediated transcriptional repression. Binds SIM3 and ERF7. Expressed in the nucleus in most tissues examined and throughout the life of the plant. Involved in jasmonic acid and ethylene dependent pathogen resistance. The sequence in GenBank has 17 AG dinucleotide repeats missing, which is also missing in Ler shotgun sequence from Cereon. Although it is annotated to be in Columbia, the GB sequence is probably not of Columbia origin. Plays a role in embryogenesis as mutants grown at higher temperatures display abnormalities in the organization of the root and shoot. Plant lines expressing an RNAi construct targeted against HDA19 shows some resistance to agrobacterium-mediated root transformation. HDA19 acts in a WOX5 mediated pathway to maintain columella stem cell fate by repressing CDF4. Class I RPD3-like family HDAC member which controls positive responses to salinity stress.","HISTONE DEACETYLASE 1 (HD1)","HISTONE DEACETYLASE 1 (HD1);HISTONE DEACETYLASE19 (HDA19);ARABIDOPSIS HISTONE DEACETYLASE 1 (ATHD1); (HDA1); (RPD3A);HISTONE DEACETYLASE 19 (HDA19);ARABIDOPSIS HISTONE DEACETYLASE 19 (ATHDA19);HISTONE DEACETYLASE 19 (HDAC19)"]
["AT3G20670","green","Encodes HTA13, a histone H2A protein.","HISTONE H2A 13 (HTA13)","HISTONE H2A 13 (HTA13)"]
["AT1G52740","green","Encodes HTA9, a histone H2A protein. Loss of all H2A.Z (triple mutant with HTA8 and HTA11) results in a reduction in DNA methylation of transposons but not that of genes. Loss of H2A.Z causes misregulation of many genes involved in the response to developmental and environmental cues, and that these genes tend to have high levels of gene-body H2A.Z.","HISTONE H2A PROTEIN 9 (HTA9)","HISTONE H2A PROTEIN 9 (HTA9); (H2A.Z)"]
["AT2G25710","green","Encodes a dual-targeted biotin holocarboxylase synthetase that can localize to the chloroplast and the cytosol. In vitro, it has been shown to catalyze the addition of biotin to the BCCP subunit of acetyl-CoA carboxylase and it can also biotinylate methylcrotonyl-CoA carboxylase. A small upstream ORF in the 5'UTR (uORF24) regulates the differential targeting of this enzyme.","HOLOCARBOXYLASE SYNTHASE 1 (HCS1)","HOLOCARBOXYLASE SYNTHASE 1 (HCS1)"]
["AT5G13010","green","Encodes a nuclear localized DEAH-box containing protein that is involved in miRNA biogenesis. Loss of function mutants are embryo lethal. Gene silencing experiments demonstrated its role in the localization of DCL-1 and HYL1 to the nuclear D-body. In silenced lines, miRNA production is suppressed and plants have developmental abnormalities and are hypersensitive to fungal pathogens.","EMBRYO DEFECTIVE 3011 (EMB3011)","HOMOLOG IN YEAST PRP16 (PRP16);PSR1-INTERACTING PROTEIN 1 (PINP1);EMBRYO DEFECTIVE 3011 (EMB3011);FOREVER YOUNG (FEY);CLUMSY VEIN (CUV)"]
["AT5G53480","green","Sensitive to ABA, role in drought stress.","HOMOLOG OF HUMAN KPNB1 (KPNB1)","HOMOLOG OF HUMAN KPNB1 (KPNB1); (IMB1); (ATKPNB1)"]
["AT2G22450","green","riboflavin biosynthesis protein;(source:Araport11)","HOMOLOG OF RIBA 2 (RIBA2)","HOMOLOG OF RIBA 2 (RIBA2); (ATRIBA2)"]
["AT5G58040","green","Encodes a subunit of the polyadenylation apparatus that interacts with and stimulates the activity of poly(A) polymerase. Additionally , it interacts with several polyadenylation factor subunits and is an RNA-binding protein. It is suggested that this protein coordinates a number of polyadenylation factor subunits with PAP and with RNA. The mRNA is cell-to-cell mobile.","HOMOLOG OF YEAST FIP1 [V] (FIP1[V])","HOMOLOG OF YEAST FIP1 [V] (ATFIP1[V]); (FIPS5);SUPPRESSOR OF CPR5 57 (SCPR57);HOMOLOG OF YEAST FIP1 [V] (FIP1[V]);FACTOR INTERACTING WITH POLY(A) POLYMERASE 1 (FIP1); (ATFIPS5)"]
["AT5G48120","green","ARM repeat superfamily protein;(source:Araport11)","HOMOLOG OF YEAST MET18 (MET18)","HOMOLOG OF YEAST MET18 (MET18); (ASI3); (MMS19)"]
["AT1G59760","green","Encodes MTR4, a putative RNA helicase and exosome co-factor. Required for proper rRNA biogenesis and development.","HOMOLOG OF YEAST MTR4 (MTR4)","HOMOLOG OF YEAST MTR4 (MTR4); (AtMTR4)"]
["AT2G17265","green","Encodes a homoserine kinase (HSK) which produces O-phospho-L-homoserine (HserP), a compound at the branching point of methionine and threonine biosynthesis. HSK is found in the stromal fraction of chloroplasts. Mutation of this gene results in higher level of the amino acid homoserine and resistance to downy mildew pathogen Hyaloperonospora arabidopsidis.","HOMOSERINE KINASE (HSK)","HOMOSERINE KINASE (HSK); (DRM1);DOWNY MILDEW RESISTANT 1 (DMR1)"]
["AT4G37580","green","involved in apical hook development. putative N-acetyltransferase","HOOKLESS 1 (HLS1)","HOOKLESS 1 (HLS1);CONSTITUTIVE PHOTOMORPHOGENIC 3 (COP3);UNUSUAL SUGAR RESPONSE 2 (UNS2)"]
["AT5G18360","green","Host immune receptor which recognizes the conserved effector HopB1.","HOPB-ACTIVATEDRESISTANCE1 (BAR1)","HOPB-ACTIVATEDRESISTANCE1 (BAR1)"]
["AT3G50950","green","Encodes a canonical CC-type NLR protein that is required for the recognition of the T3SE HopZ1a as well as several other Hop effectors from the pathogenic bacteria P. syringae.","HOPZ-ACTIVATED RESISTANCE 1 (ZAR1)","HOPZ-ACTIVATED RESISTANCE 1 (ZAR1)"]
["AT5G10630","green","Transcripts of this gene are alternatively spliced to encode either HBS1, a decoding factor translational GTPase, or SKI7, a component of the cytosolic RNA exosome.","SUPER KILLER 7 (SKI7)","HSP70 SUBFAMILY B SUPPRESSOR 1 (HBS1);SUPER KILLER 7 (SKI7)"]
["AT4G22670","green","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. The mRNA is cell-to-cell mobile.","HSP70-INTERACTING PROTEIN 1 (HIP1)","HSP70-INTERACTING PROTEIN 1 (AtHip1);HSP70-INTERACTING PROTEIN 1 (HIP1);TETRATRICOPEPTIDE REPEAT 11 (TPR11)"]
["AT3G47360","green","Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.","HYDROXYSTEROID DEHYDROGENASE 3 (HSD3)","HYDROXYSTEROID DEHYDROGENASE 3 (AtHSD3);HYDROXYSTEROID DEHYDROGENASE 3 (HSD3)"]
["AT4G27450","green","aluminum induced protein with YGL and LRDR motifs;(source:Araport11)","HYPOXIA RESPONSE UNKNOWN PROTEIN 54 (HUP54)","HYPOXIA RESPONSE UNKNOWN PROTEIN 54 (HUP54)"]
["AT4G31180","green","The IBI1 gene encodes an aspartyl tRNA synthetase (AspRS). In addition, the IBI1 protein acts as a receptor protein of the chemical plant defence activator beta-aminobutyric acid (BABA). Binding of IBI1 to the active R-enantiomer of BABA primes non-canonical defence activity of the AspRS protein against pathogen attack.","IMPAIRED IN BABA-INDUCED DISEASE IMMUNITY 1 (IBI1)","IMPAIRED IN BABA-INDUCED DISEASE IMMUNITY 1 (IBI1)"]
["AT1G02690","green","Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.","IMPORTIN ALPHA ISOFORM 6 (IMPA-6)","IMPORTIN ALPHA ISOFORM 6 (IMPA-6)"]
["AT5G08550","green","Encodes a transcriptional repressor that is homologous to the C-terminal region of mammalian GC binding factor. It regulates endoreduplication through control of CYC2A expression.","INCREASED LEVEL OF POLYPLOIDY1-1D (ILP1)","INCREASED LEVEL OF POLYPLOIDY1-1D (ILP1)"]
["AT3G09710","green","Ca(2+)-dependent calmodulin-binding protein. Targeted to the nucleus. Involved in glucosinolate metabolism in response to biotic challenge. Expressed in vascular tissue.Member of IQ67 (CaM binding) domain containing family.","IQ-DOMAIN 1 (IQD1)","IQ-DOMAIN 1 (IQD1)"]
["AT1G27600","green","Encodes a member of the GT43 family glycosyltransferases involved in glucuronoxylan biosynthesis: AT2G37090 (IRX9) and AT1G27600 (IRX9-L or I9H, IRX9 homolog); AT4G36890 (IRX14) and AT5G67230 (IRX14-L or I14H, IRX14 homolog). They form two functionally non-redundant groups essential for the normal elongation of glucuronoxylan backbone. I9H functions redundantly with IRX9, I14H is redundant with IRX14. IRX9 or I9H do not complement IRX14, IRX14 or I14H do not complement IRX9.","IRREGULAR XYLEM 9-LIKE (IRX9-L)","IRREGULAR XYLEM 9-LIKE (IRX9-L);IRREGULAR XYLEM 9 HOMOLOG (I9H)"]
["AT3G20810","green","JMJD5 encodes a protein which contains a jumonji-C (jmjC) domain. jmjd5 mutant plants have a short-period circadian phenotype. JMJD5 has histone demethylase activity and interacts with EFM to repress FT.","JUMONJI DOMAIN CONTAINING 5 (JMJD5)","JUMONJI DOMAIN CONTAINING 5 (JMJD5);JUMONJI C DOMAIN-CONTAINING PROTEIN 30 (JMJ30)"]
["AT1G80440","green","Encodes a member of a family of F-box proteins, called the KISS ME DEADLY (KMD) family, that targets type-B ARR proteins for degradation and is involved in the negative regulation of the cytokinin response. Also named as KFB20, a member of a group of Kelch repeat F-box proteins that negatively regulate phenylpropanoid biosynthesis by targeting the phenypropanoid biosynthesis enzyme phenylalanine ammonia-lyase. The mRNA is cell-to-cell mobile.","KISS ME DEADLY 1 (KMD1)","KISS ME DEADLY 1 (KMD1);KELCH REPEAT F-BOX 20 (KFB20)"]
["AT3G59940","green","Encodes a member of a family of F-box proteins, called the KISS ME DEADLY (KMD) family, that targets type-B ARR proteins for degradation and is involved in the negative regulation of the cytokinin response. Also named as KFB50, a member of a group of Kelch repeat F-box proteins that negatively regulate phenylpropanoid biosynthesis by targeting the phenypropanoid biosynthesis enzyme phenylalanine ammonia-lyase. The mRNA is cell-to-cell mobile.","KISS ME DEADLY 4 (KMD4)","KISS ME DEADLY 4 (KMD4);KELCH REPEAT F-BOX 50 (KFB50); (ATKFB50)"]
["AT1G79880","green","RNA recognition motif (RRM)-containing protein;(source:Araport11)","LA PROTEIN 2 (LA2)","LA PROTEIN 2 (LA2); (ATLA2)"]
["AT3G62130","green","Encodes an enzyme that decomposes L-cysteine into pyruvate, H2S, and NH3.","L-CYSTEINE DESULFHYDRASE (LCD)","L-CYSTEINE DESULFHYDRASE (LCD); (ATLCD)"]
["AT5G16900","green","Leucine-rich repeat protein kinase family protein;(source:Araport11)",null,"LEAF AND FLOWER RELATED (LFR)"]
["AT3G59530","green","Calcium-dependent phosphotriesterase superfamily protein;(source:Araport11)","LESS ADHERENT POLLEN 3 (LAP3)","LESS ADHERENT POLLEN 3 (LAP3); (ATLAP3)"]
["AT1G02100","green","Leucine carboxyl methyltransferase;(source:Araport11)","SUPPRESSOR OF BRI1 (SBI1)","LEUCINE CARBOXYL METHYL TRANSFERASE 1 (LCMT1);SUPPRESSOR OF BRI1 (SBI1)"]
["AT2G15880","green","Pollen expressed protein required for pollen tube growth.Along with other members of the LRX family, itnteracts with RALF4 to control pollen tube growth and integrity. Loss of function results in premature pollen tube rupture and reduced fertility.","LEUCINE-RICH REPEAT/EXTENSIN 10 (LRX10)","LEUCINE-RICH REPEAT/EXTENSIN 10 (LRX10)"]
["AT2G46260","green","Involvement in protein ubiquitylation is predicted based on physical interaction with CULLIN 3 proteins. LRBs physically interact with photoexcited and phosphorylated CRY2, at the CCE domain of CRY2, to facilitate polyubiquitination and degradation of CRY2 in response to blue light.","LIGHT-RESPONSE BTB 1 (LRB1)","LIGHT-RESPONSE BTB 1 (LRB1)"]
["AT2G24260","green","Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair and sperm cell development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1), At4g30980 (AtLRL2), and At5g58010 (AtLRL3).","LJRHL1-LIKE 1 (LRL1)","LJRHL1-LIKE 1 (LRL1);DEFECTIVE REGION OF POLLEN 1 (DROP1)"]
["AT3G53110","green","Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA. The mRNA is cell-to-cell mobile.","LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4)","LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4)"]
["AT4G31080","green","Encodes one of two LUNAPARK proteins in Arabidopsis. Both LNPA and LNPB are predominantly distributed throughout the ER, but not preferentially localized at the three-way junctions. Mutation of both LNPA and LNPB together caused the cortical ER to develop poor ER cisternae and a less dense tubular network. E3 ligase involved in degradation of RHD3 to maintain a tubular ER network.","LUNAPARK2.2 (LNP2.2)","LUNAPARK2.2 (LNP2.2);LUNAPARK A (LNPA)"]
["AT1G78960","green","Encodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin.","LUPEOL SYNTHASE 2 (LUP2)","LUPEOL SYNTHASE 2 (LUP2);LUPEOL SYNTHASE 2 (ATLUP2)"]
["AT5G63190","green","Encodes a member of the MRF (MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR) gene family under TOR control that is transcriptionally induced by dark and starvation. MRF1 can be phosphorylated in vitro by S6K1 and S6K2.","MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 (MRF1)","MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 1 (MRF1)"]
["AT4G24800","green","MA3 domain-containing protein;(source:Araport11)","EIN2 C-TERMINUS INTERACTING PROTEIN 1 (ECIP1)","MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 3 (MRF3);EIN2 C-TERMINUS INTERACTING PROTEIN 1 (ECIP1)"]
["AT2G04865","green","Encodes a nuclear localized aminotransferase-like protein containing a plant mobile domain. The mRNA is cell-to-cell mobile.","MAIN-LIKE 2 (MAIL2)","MAIN-LIKE 2 (MAIL2)"]
["AT1G06220","green","Encodes a protein with similarity to splicing factor Snu114. Snu114 is thought to be involved in activation of the splicosome. Loss of GFA1 function results in reduced female fertility. Approximately 50% of ovules abort due to defects in the female gametophyte. In mutant gametophytes antipodal cells express egg cell markers suggesting a defect in specification of cell fate.GFA1 is also required to restrict the expression of LIS. The mRNA is cell-to-cell mobile.","MATERNAL EFFECT EMBRYO ARREST 5 (MEE5)","MATERNAL EFFECT EMBRYO ARREST 5 (MEE5);CLOTHO (CLO);GAMETOPHYTE FACTOR 1 (GFA1)"]
["AT4G04040","green","Encodes a pyrophosphate-dependent phosphofructokinase B subunit (PFPbeta2).","MATERNAL EFFECT EMBRYO ARREST 51 (MEE51)","MATERNAL EFFECT EMBRYO ARREST 51 (MEE51)"]
["AT5G20170","green","Encodes a subunit of the Mediator complex that physically interacts with DNA repair proteins is an important regulator of the DNA damage response after UV-B irradiation.","MEDIATOR 17 (MED17)","MEDIATOR 17 (MED17)"]
["AT3G04740","green","encodes a protein with similarities to subunits of the Mediator complex, required for RNA polymerase II recruitment at target promoters in response to specific activators. Lines carrying loss of function mutations in the gene have reduced cell numbers in aerial organs. On the other hand, lines overexpressing the gene have increased number of small cells in clusters, suggesting cell division is more unsynchronized in the overexpressors.Required for expression of CBF-controlled cold-responsive genes. Required for recruitment of the Mediator complex and RNA polymerase II to CBF-controlled cold-responsive genes. Required for expression of some dark-upregulated genes.","STRUWWELPETER (SWP)","MEDIATOR COMPONENTS 14 (MED14);ARABIDOPSIS MEDIATOR COMPONENTS 14 (ATMED14);STRUWWELPETER (SWP)"]
["AT2G36900","green","member of Membrin Gene Family; Qb-SNARE which interacts specifically with Arf1 in the Golgi apparatus.","MEMBRIN 11 (MEMB11)","MEMBRIN 11 (MEMB11); (ATMEMB11)"]
["AT4G29840","green","Encodes threonine synthase, an enzyme that performs the last step in threonine biosynthesis.","METHIONINE OVER-ACCUMULATOR 2 (MTO2)","METHIONINE OVER-ACCUMULATOR 2 (MTO2);THREONINE SYNTHASE (TS);MOOTS KOOM 1 (MKO1);THREONINE SYNTHASE 1 (TS1);THREONINE SYNTHASE 1 (TSY1)"]
["AT1G33990","green","Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.","METHYL ESTERASE 14 (MES14)","METHYL ESTERASE 14 (ATMES14);METHYL ESTERASE 14 (MES14)"]
["AT5G38850","green","TNL-encoding miR825-5p target.","MICRORNA-SILENCED TNL1 (MIST1)","MICRORNA-SILENCED TNL1 (MIST1)"]
["AT4G38440","green","Encodes MINIYO (IYO), a positive regulator of transcriptional elongation that is essential for cells to initiate differentiation.","MINIYO (IYO)","MINIYO (IYO)"]
["AT1G32730","green","Identified as a specific subunit of MINU1/2-associated SWI/SNF (MAS) complexes (PMID: 36189880,PMID:36471048). Dual roles for CND1 in maintenance of nuclear and chloroplast genome stability.","PLANT-SPECIFIC SWI/SNF-ASSOCIATED PROTEIN 1 (PSA1)","MINU-INTERACTING SUBUNIT (MIS);PLANT-SPECIFIC SWI/SNF-ASSOCIATED PROTEIN 1 (PSA1);CHLOROPLAST AND NUCLEUS DUAL-LOCALIZED PROTEIN 1 (CND1)"]
["AT1G26800","green","MPSR1 is cytoplasmic E3 ligase that senses misfolded proteins independently of chaperones and targets those proteins for degradation via the 26S proteasome. Involved in the regulation of the homeostasis of sensor NLR immune receptors.","MISFOLDED PROTEIN SENSING RING E3 LIGASE 1 (MPSR1)","MISFOLDED PROTEIN SENSING RING E3 LIGASE 1 (MPSR1); (SNIPER2)"]
["AT5G09950","green","Encodes a DYW-class PPR protein required for RNA editing at four sites in mitochondria of A. thaliana.","MITOCHONDRIAL EDITING FACTOR 7 (MEF7)","MITOCHONDRIAL EDITING FACTOR 7 (MEF7)"]
["ATMG01080","green","subunit 9 of mitochondrial F0-ATPase","MITOCHONDRIAL F0-ATPASE SUBUNIT 9 (ATP9)","MITOCHONDRIAL F0-ATPASE SUBUNIT 9 (ATP9)"]
["AT4G35490","green","mitochondrial ribosomal protein L11;(source:Araport11)","MITOCHONDRIAL RIBOSOMAL PROTEIN L11 (MRPL11)","MITOCHONDRIAL RIBOSOMAL PROTEIN L11 (MRPL11);RIBOSOMAL PROTEIN UL11M (UL11M)"]
["ATMG00290","green","encodes a mitochondrial ribosomal protein S4, a constituent of the small subunit of the ribosomal complex","MITOCHONDRIAL RIBOSOMAL PROTEIN S4 (RPS4)","MITOCHONDRIAL RIBOSOMAL PROTEIN S4 (RPS4);RIBOSOMAL PROTEIN US4M (US4M)"]
["AT5G52630","green","Encodes a member of the DYW subfamily of pentatricopeptide repeat (PPR) proteins. Loss of MEF1 function affects RNA editing at specific sites in the mitochondrial genome but do not exhibit obvious phenotypes.","MITOCHONDRIAL RNA EDITING FACTOR 1 (MEF1)","MITOCHONDRIAL RNA EDITING FACTOR 1 (MEF1)"]
["AT5G19010","green","member of MAP Kinase","MITOGEN-ACTIVATED PROTEIN KINASE 16 (MPK16)","MITOGEN-ACTIVATED PROTEIN KINASE 16 (MPK16)"]
["AT4G24680","green","Encodes MOS1 (MODIFIER OF snc1). MOS1 contains a BAT2 domain that is conserved in plants and animals. MOS1 associates with the promoter of SNC1 and regulates its expression.","MODIFIER OF SNC1 (MOS1)","MODIFIER OF SNC1 (MOS1)"]
["AT2G26430","green","Encodes an ania-6a type arginine-rich cyclin which confers tolerance to LiCl and NaCl when expressed in yeast.","ARGININE-RICH CYCLIN 1 (RCY1)","MODIFIER OF SNC1 12 (MOS12); (CYCL1);ARGININE-RICH CYCLIN 1 (RCY1);ARGININE-RICH CYCLIN 1 (ATRCY1)"]
["AT1G33520","green","Has single homolog in Arabidopsis, also homologs in human, mouse and C. elegans; contains one G-patch domain (known to mediate RNA-protein interactions) and two KOW domains (may bind RNA and/or protein); localized to the nucleus; mutant suppresses high SA levels and constitutive disease resistance in snc1 npr1 background; required for basal resistance against Pseudomonas syringae maculicola ES4326 and R gene-mediated resistance specified by RPM1, PPS4 and RPP4;","MODIFIER OF SNC1, 2 (MOS2)","MODIFIER OF SNC1, 2 (MOS2)"]
["AT5G62600","green","Encodes a nuclear importer of serine-arginine rich (SR) proteins and is involved in the regulation of splicing of R genes by regulating the import of the SR proteins into the nucleus.","MODIFIER OF SNC1-1, 14 (MOS14)","MODIFIER OF SNC1-1, 14 (MOS14)"]
["AT1G80310","green","MOT2 encodes a molybdate transporter which locates to the vacuolar membrane. Loss-of-function (knock out) mutants show elevated molydate levels in rosette leaves and in fully senescent leaves, but decreased MoO4 levels in seeds. Under conditions of molybdate deficiency leaves from mot2::tDNA mutants show strongly reduced nitrate reductase activity. The mot2 gene is slightly expressed in young and mature leaves, but strongly in senescing leaves. This observation points to a function of MOT2 in molybdate transfer from leaves to seeds during plant senescence.","MOLYBDATE TRANSPORTER 2 (MOT2)","MOLYBDATE TRANSPORTER 2 (MOT2)"]
["AT3G13080","green","encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.","ATP-BINDING CASSETTE C3 (ABCC3)","MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 3 (ATMRP3);MULTIDRUG RESISTANCE PROTEIN 3 (MRP3);MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 3 (MRP3);ATP-BINDING CASSETTE C3 (ABCC3)"]
["AT2G47800","green","Encodes a plasma membrane localized ATPase transporter involved in multidrug transport. The expression of this gene is upregulated by herbicide safeners such as benoxacor, fluxofenim and fenclorim. The mRNA is cell-to-cell mobile.","ATP-BINDING CASSETTE C4 (ABCC4)","MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 4 (ATMRP4); (EST3);MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 4 (MRP4);ATP-BINDING CASSETTE C4 (ABCC4)"]
["AT2G16640","green","multimeric translocon complex in the outer envelope membrane 132;(source:Araport11)","MULTIMERIC TRANSLOCON COMPLEX IN THE OUTER ENVELOPE MEMBRANE 132 (TOC132)","MULTIMERIC TRANSLOCON COMPLEX IN THE OUTER ENVELOPE MEMBRANE 132 (ATTOC132);MULTIMERIC TRANSLOCON COMPLEX IN THE OUTER ENVELOPE MEMBRANE 132 (TOC132);ARSENATE INDUCED CHLOROSIS 1 (AIC1)"]
["AT5G26820","green","Mutations in MAR1 confer resistance, while MAR1 overexpression causes hypersensitivity to multiple aminoglycoside antibiotics. Localizes to the chloroplast envelope. MAR1 may act as a plastid transporter involved in cellular iron homeostasis. The mRNA is cell-to-cell mobile.","IRON-REGULATED PROTEIN 3 (IREG3)","MULTIPLE ANTIBIOTIC RESISTANCE 1 (MAR1);FERROPORTIN 3 (FPN3);IRON REGULATED 3 (IREG3); (RTS3)"]
["AT3G24320","green","Encodes a DNA binding protein that promotes re-arrangements of mitochondrial genome. Mutations affects mitochondrial gene expression, and impairs mitochondrial function. Dual targeting of the protein to mitochondria and chloroplasts caused by alternative translation initiation. Plastid MSH1 depletion results in variegation, abiotic stress tolerance, variable growth rate, and delayed maturity.","MUTL PROTEIN HOMOLOG 1 (MSH1)","MUTL PROTEIN HOMOLOG 1 (MSH1); (CHM1); (ATMSH1);CHLOROPLAST MUTATOR (CHM)"]
["AT4G02070","green","encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH6 bound the (+T) substrate strongly, (T/G) well, and (+AAG) no better than it did a (T/A) homoduplex.","MUTS HOMOLOG 6 (MSH6)","MUTS HOMOLOG 6 (MSH6);ARABIDOPSIS THALIANA MUTS HOMOLOG 6 (ATMSH6);MUTS HOMOLOG 6-1 (MSH6-1)"]
["AT5G11510","green","Arabidopsis thaliana putative c-myb-like transcription factor MYB3R-4. Functions in powdery mildew induced host endoreduplication at the site of infection. Activates mitotic gene expression, cytokinin response.","MYB DOMAIN PROTEIN 3R-4 (MYB3R-4)","MYB DOMAIN PROTEIN 3R-4 (MYB3R-4);MYB DOMAIN PROTEIN 3R4 (AtMYB3R4)"]
["AT1G01010","green","Member of the NAC domain containing family of plant specific transcriptional regulators.","NAC DOMAIN CONTAINING PROTEIN 1 (NAC001)","NAC DOMAIN CONTAINING PROTEIN 1 (ANAC001); (NTL10);NAC DOMAIN CONTAINING PROTEIN 1 (NAC001)"]
["AT5G09330","green","NAC domain containing protein 82;(source:Araport11)","NAC DOMAIN CONTAINING PROTEIN 82 (NAC082)","NAC DOMAIN CONTAINING PROTEIN 82 (anac082);NAC DOMAIN CONTAINING PROTEIN 82 (NAC082);VND-INTERACTING 1 (VNI1)"]
["AT1G28380","green","This gene is predicted to encode a protein involved in negatively regulating salicylic acid-related defense responses and cell death programs. nsl1 mutants develop necrotic lesions spontaneously and show other features of a defense response, such as higher levels of SA and disease resistance-related transcripts, in the absence of a biotic stimulus. The NSL1 protein is predicted to have a MACPF domain, found in proteins that form a transmembrane pore in mammalian immune responses. NSL1 transcript levels do not appear to change in response to biotic stresses, but are elevated by cycloheximide in seedlings, and by sodium chloride in roots. The mRNA is cell-to-cell mobile.","NECROTIC SPOTTED LESIONS 1 (NSL1)","NECROTIC SPOTTED LESIONS 1 (NSL1)"]
["AT1G01030","green","Member of the RAV family of DNA binding proteins. Contains B3 domain. Component of transcriptional regulatory complex directing stigma development","NGATHA3 (NGA3)","NGATHA3 (NGA3)"]
["AT3G12320","green","Member of a small gene family. Appears to be clock regulated.Somewhat redundant with LNK1/2 though more like LNK4 in having affects on biomass accumulation and phototrophism.","NIGHT LIGHT-INDUCIBLE AND CLOCK-REGULATED GENE 3 (LNK3)","NIGHT LIGHT-INDUCIBLE AND CLOCK-REGULATED GENE 3 (LNK3)"]
["AT4G24020","green","Encodes NIN Like Protein 7 (NLP7). Modulates nitrate sensing and metabolism. Mutants of NLP7 show features of nitrogen-starved plants and are tolerant to drought stress. Localized in the nucleus and functions as a putative transcription factor. The mRNA is cell-to-cell mobile.","NIN LIKE PROTEIN 7 (NLP7)","NIN LIKE PROTEIN 7 (NLP7)"]
["AT4G38340","green","Chip-seq data indicates bZIP1 binds to the NLP3 promoter.","NIN-LIKE PROTEIN 3 (NLP3)","NIN-LIKE PROTEIN 3 (NLP3)"]
["AT2G15620","green","Involved in the second step of nitrate assimilation. Its expression is induced by nitrate. The mRNA is cell-to-cell mobile.","NITRITE REDUCTASE 1 (NIR1)","NITRITE REDUCTASE 1 (NIR1);NITRITE REDUCTASE (NIR);ARABIDOPSIS THALIANA NITRITE REDUCTASE (ATHNIR)"]
["AT3G53180","green","Encodes a protein that is the product of a fusion gene with a C-terminal GSI like sequence and an N-terminal part sharing homology with nodulins. It self-assembles into oligomers and its expression is increased in response to flagellin treatment. The protein co-localizes with microtubules and binds gamma-tubulin. RNAi lines are affected in root morphogenesis.","NODULIN/GLUTAMINE SYNTHASE-LIKE PROTEIN (NodGS)","NODULIN/GLUTAMINE SYNTHASE-LIKE PROTEIN (NodGS)"]
["AT1G63270","green","Encodes a member of a heterogenous group of non-intrinsic ATP-binding cassette (ABC) proteins. Members of this group bear no close resemblance to each other nor to representatives of specific ABC protein subfamilies from other organisms. This grouping is arbitrary and will likely change upon acquisition of further data.","ATP-BINDING CASSETTE I1 (ABCI1)","NON-INTRINSIC ABC PROTEIN 10 (ATNAP10);NON-INTRINSIC ABC PROTEIN 10 (NAP10);ATP-BINDING CASSETTE I1 (ABCI1);CYTOCHROME C MATURATION A (ATCCMA)"]
["AT1G51130","green","&#948;-kleisin component of the SMC5/6 complex, possibly involved in synaptonemal complex formation.","NON-SMC ELEMENT4 A (NSE4A)","NON-SMC ELEMENT4 A (NSE4A)"]
["AT3G63000","green","NPL4-like protein 1;(source:Araport11)","NPL4-LIKE PROTEIN 1 (NPL41)","NPL4-LIKE PROTEIN 1 (NPL41)"]
["AT1G07980","green","nuclear factor Y, subunit C10;(source:Araport11)","NUCLEAR FACTOR Y, SUBUNIT C10 (NF-YC10)","NUCLEAR FACTOR Y, SUBUNIT C10 (NF-YC10)"]
["AT5G04050","green","Essential maturase splicing factor required for splicing of nad1 introns 1, 3 and 4, holo&#8208;complex I biogenesis, and embryo development.","NUCLEAR MATURASE 3 (NMAT3)","NUCLEAR MATURASE 3 (NMAT3)"]
["AT5G63320","green","Encodes NPX1 (Nuclear Protein X1), a nuclear factor regulating abscisic acid responses.","NUCLEAR PROTEIN X1 (NPX1)","NUCLEAR PROTEIN X1 (NPX1)"]
["AT1G74350","green","Encodes nMAT4, a maturase factor required for nad1 pre-mRNA processing and maturation. Essential for holocomplex I biogenesis in Arabidopsis mitochondria.","NUCLEAR-ENCODED MATURASE-RELATED 4 (NMAT4)","NUCLEAR-ENCODED MATURASE-RELATED 4 (NMAT4)"]
["AT1G14850","green","Encodes a protein similar to nucleoporin, a a major component of the nuclear pore complex (NPC) involved in cellular nucleo-cytoplasmic transport","NUCLEOPORIN 155 (NUP155)","NUCLEOPORIN 155 (NUP155)"]
["AT5G20200","green","Atypical nuceloporin-like protein.","NUCLEOPORIN 82 (NUP82)","NUCLEOPORIN 82 (NUP82)"]
["AT5G48160","green","Encodes a nuclear PHD finger protein that is functionally redundant with OBE1 and plays an important role in the maintenance and/or establishment of the root and shoot apical meristems.","OBERON2 (OBE2)","OBERON2 (OBE2)"]
["AT1G80410","green","Encodes the catalytic subunit of a N-terminal acetyltransferase.","NAA15 (NAA15)","OMISHA (OMA);NAA15 (NAA15);MUTANT,SNC1-ENHANCING 6 (MUSE6);EMBRYO DEFECTIVE 2753 (EMB2753)"]
["AT1G08070","green","Encodes a chloroplast RNA editing factor.","ORGANELLE TRANSCRIPT PROCESSING 82 (OTP82)","ORGANELLE TRANSCRIPT PROCESSING 82 (OTP82);EMBRYO DEFECTIVE 3102 (EMB3102)"]
["AT2G40000","green","Ortholog of sugar beet HS1 PRO-1 2. Involved in basal disease resistance.","ORTHOLOG OF SUGAR BEET HS1 PRO-1 2 (HSPRO2)","ORTHOLOG OF SUGAR BEET HS1 PRO-1 2 (HSPRO2);ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2 (ATHSPRO2)"]
["AT5G56550","green","Encodes OXIDATIVE STRESS 3 (OXS3)&#65292; involved in tolerance to heavy metals and oxidative stress.","OXIDATIVE STRESS 3 (OXS3)","OXIDATIVE STRESS 3 (ATOXS3);OXIDATIVE STRESS 3 (OXS3)"]
["AT1G34355","green","Encodes PS1 (Parallel Spindle 1). Mutations in PS1 lead to diploid male spores, diploid pollen grains, and spontaneous triploid plants in the next generation. Female meiosis is not affected in the mutants.","PARALLEL SPINDLE 1 (PS1)","PARALLEL SPINDLE 1 (ATPS1);PARALLEL SPINDLE 1 (PS1)"]
["AT1G61860","green","Protein kinase superfamily protein;(source:Araport11)","PBS1-LIKE 41 (PBL41)","PBS1-LIKE 41 (PBL41)"]
["AT5G04810","green","Pentatricopeptide which is essential during the early stages of embryo development and acts in the plastid nucleoids as the factor responsible of rps12 intron 1 trans-splicing and, indirectly, in the assembly of 70S ribosomes and plastid translation.","PENTATRICOPEPTIDE REPEAT 4 (PPR4)","PENTATRICOPEPTIDE REPEAT 4 (PPR4)"]
["AT1G10910","green","Member of the P subfamily of PRR proteins. Loss of function results in defects in abnormal plastid RNA edit and chloroplast biogenesis","EMBRYO DEFECTIVE 3103 (EMB3103)","PENTRATRICOPEPTIDE REPEAT PROTEIN PIGMENT-DEFECTIVE MUTANT2 (PDM2);EMBRYO DEFECTIVE 3103 (EMB3103)"]
["AT5G56290","green","Encodes the peroxisomal targeting signal type 1 receptor that facilitates peroxisomal protein translocation. It recognizes proteins with the PTS1 consensus sequence (tripeptide SKL or a conserved variant) at the extreme C terminus. The protein has several domains, including C-terminal tetratricopeptide repeat motifs which act in binding the C-terminal \"SKL\" targeting signal. The mechanism of transport has been worked out in other organisms: The receptor recognizes and binds cytosolic PTS1-containing proteins. The PEX5-PTS1 complex binds a PEX14/PEX13 receptor complex at the peroxisome membrane and is translocated into the peroxisome matrix in a process dependent on PEX2,PEX10, and PEX12. In the peroxisome matrix, PEX5 releases its cargo and is recycled to the cytosol in a process dependent on PEX1, PEX4, PEX6 and PEX22. It is also involved, in conjunction with PEX7, in PTS1- and PTS2-dependent peroxisomal protein import. RNAi experiments suggest that PEX5 is necessary for the maintenance of both glyoxysomal and leaf peroxisomal functions.","PEROXIN 5 (PEX5)","PEROXIN 5 (PEX5);EMBRYO DEFECTIVE 2790 (EMB2790);ARABIDOPSIS PEROXIN 5 (ATPEX5)"]
["AT1G29260","green","Encodes the peroxisomal targeting signal type 2 receptor that facilitates peroxisomal protein translocation. It recognizes proteins with the PTS2 consensus sequence (RLX5HL or a variant) within the first 30 or so amino acids. RNAi experiments suggest that PEX7 is necessary for the maintenance of glyoxysomal but not leaf peroxisomal function. The mRNA is cell-to-cell mobile.","PEROXIN 7 (PEX7)","PEROXIN 7 (PEX7);ARABIDOPSIS PEROXIN 7 (ATPEX7)"]
["AT3G04460","green","RING finger protein involved in peroxisome biogenesis. Also involved in peroxisomal import of nitric oxide synthase. Has been demonstrated to have E3 ubiquitin ligase activity.","PEROXIN-12 (PEX12)","PEROXIN-12 (PEX12);ABERRANT PEROXISOME MORPHOLOGY 4 (APM4)"]
["AT1G65970","green","thioredoxin-dependent peroxidase 2","THIOREDOXIN-DEPENDENT PEROXIDASE 2 (TPX2)","PEROXIREDOXIN IIC (PRXIIC);THIOREDOXIN-DEPENDENT PEROXIDASE 2 (TPX2)"]
["AT3G05290","green","encodes a peroxisomal adenine nucleotide transporter, involved in fatty acid beta-oxidation during early stage of postgerminative growth.","PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1 (PNC1)","PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 1 (PNC1); (ATPNC1)"]
["AT5G14520","green","Encodes a nucleolar protein that plays an essential role in cell growth and survival through its regulation of ribosome biogenesis and mitotic progression.","PESCADILLO (PES)","PESCADILLO (PES)"]
["AT5G35210","green","Encodes a chloroplast envelope-bound plant homeodomain (PHD) transcription factor with transmembrane domains that functions in multiple retrograde signal pathways. The proteolytic cleavage of PTM occurs in response to retrograde signals and amino-terminal PTM accumulates in the nucleus, where it activates ABI4 transcription in a PHD-dependent manner associated with histone modifications.","PHD TYPE TRANSCRIPTION FACTOR WITH TRANSMEMBRANE DOMAINS (PTM)","PHD TYPE TRANSCRIPTION FACTOR WITH TRANSMEMBRANE DOMAINS (PTM);DDT-PHD PROTEIN1 (DDP1)"]
["AT5G04720","green","Encodes a member of the ADR1 family nucleotide-binding leucine-rich repeat (NB-LRR) immune receptors. The mRNA is cell-to-cell mobile.","ADR1-LIKE 2 (ADR1-L2)","PHOENIX 21 (PHX21);ADR1-LIKE 2 (ADR1-L2)"]
["AT4G28610","green","Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling and PHT1;1 in arsenate accumulation. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in shoots.","PHOSPHATE STARVATION RESPONSE 1 (PHR1)","PHOSPHATE STARVATION RESPONSE 1 (PHR1); (AtPHR1)"]
["AT5G64070","green","Encodes a phosphatidylinositol 4-OH kinase, PI-4Kbeta1. Arabidopsis contains 12 PI-4Ks in three separate families: PI-4Kalphs, PI-4kbeta, and PI-4Kgamma. PI-4Kbeta1 is 83% identical to PI-4kbeta2 encoded by At5g09350. Interacts with the RabA4b GTPase. Important for polarized root hair growth as the loss of this gene and its close relative PI-4kbeta2, leads to the formation of abnormal root hairs.","PHOSPHATIDYLINOSITOL 4-OH KINASE BETA1 (PI-4KBETA1)","PHOSPHATIDYLINOSITOL 4-OH KINASE BETA1 (PI4KBETA1);PHOSPHATIDYLINOSITOL 4-OH KINASE BETA1 (PI-4KBETA1)"]
["AT2G41210","green","Encodes a protein with phosphatidylinositol-4-phosphate 5-kinase activity that plays a role in pollen tip growth. The enzyme localizes to the apical plasma membrane and adjacent cytosolic region of pollen tubes. Overexpression of this gene leads to increased deposition of pectin in the cell wall at the tip of the pollen tube and causes altered pollen tube morphology.","PHOSPHATIDYLINOSITOL- 4-PHOSPHATE 5-KINASE 5 (PIP5K5)","PHOSPHATIDYLINOSITOL- 4-PHOSPHATE 5-KINASE 5 (PIP5K5)"]
["AT4G25970","green","Encodes the major form of the two non-mitochondrail phosphatidylserine decarboxylase. Located at the ER. The mRNA is cell-to-cell mobile.","PHOSPHATIDYLSERINE DECARBOXYLASE 3 (PSD3)","PHOSPHATIDYLSERINE DECARBOXYLASE 3 (PSD3)"]
["AT3G24120","green","MYB-CC protein involved in regulation of response to phosphate starvation.","PHR1-LIKE 2 (PHL2)","PHR1-LIKE 2 (PHL2)"]
["AT2G18790","green","Red/far-red photoreceptor involved in the regulation of de-etiolation. Exists in two inter-convertible forms: Pr and Pfr (active). Involved in the light-promotion of seed germination and in the shade avoidance response. Promotes seedling etiolation in both the presence and absence of phytochrome A. Overexpression results in etiolation under far-red light. Accumulates in the nucleus after exposure to far red light. The phosphorylation state of the Ser-86 residue of the phytochrome B molecule alters dark reversion of the molecule. The mRNA is cell-to-cell mobile.","PHYTOCHROME B (PHYB)","PHYTOCHROME B (PHYB); (HY3);OUT OF PHASE 1 (OOP1)"]
["AT2G20180","green","Encodes a novel Myc-related bHLH transcription factor that has transcriptional activation activity in the dark. It is a key negative regulator of phytochrome-mediated seed germination and acts by inhibiting chlorophyll biosynthesis, light-mediated suppression of hypocotyl elongation and far-red light-mediated suppression of seed germination, and promoting negative gravitropism in hypocotyls. Light reduces this activity in a phy-dependent manner. The protein preferentially interacts with the Pfr forms of Phytochrome A (PhyA) and Phytochrome B (PhyB), is physically associated with APRR1/TOC1 and is degraded in red (R) and far-red (FR) light through the ubiquitin (ub)-26S proteasome pathway to optimize photomorphogenic development in Arabidopsis. It also negatively regulates GA3 oxidase expression.","PHYTOCHROME INTERACTING FACTOR 3-LIKE 5 (PIL5)","PHYTOCHROME INTERACTING FACTOR 3-LIKE 5 (PIL5)"]
["AT2G42810","green","Encodes a phytochrome-specific type 5 serine/threonine protein phosphatase. It dephosphorylates active Pfr-phytochromes. Controls light signal flux by enhancing phytochrome stability and affinity for a signal transducer. The gene is alternately spliced. This variant is an integral membrane protein localized to the ER and nuclear envelope. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. It also regulates tetrapyrrole biosynthesis through the accumulation of Mg-ProtoIX and acts as a negative regulator of photosynthesis associated nuclear gene expression during chloroplast biogenesis and development.","PROTEIN PHOSPHATASE 5 (PP5)","PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 5 (PAPP5);PROTEIN PHOSPHATASE 5 (PP5);PROTEIN PHOSPHATASE 5.2 (PP5.2);ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 5 (AtPP5)"]
["AT3G46640","green","Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter. The mRNA is cell-to-cell mobile.","PHYTOCLOCK 1 (PCL1)","PHYTOCLOCK 1 (PCL1)"]
["AT3G06960","green","TGD4 is an integral dimeric beta-barrel lipid transfer protein that binds PtdOH with its N-terminus and contains dimerization domains at its C-terminus. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.","PIGMENT DEFECTIVE 320 (PDE320)","PIGMENT DEFECTIVE 320 (PDE320);TRIGALACTOSYLDIACYLGLYCEROL 4 (TGD4)"]
["AT5G27270","green","P-type PPR chloroplast localized protein required for group II intron splicing in chloroplasts.","EMBRYO DEFECTIVE 976 (EMB976)","PIGMENT-DEFECTIVE MUTANT4 (PDM4);EMBRYO DEFECTIVE 976 (EMB976)"]
["AT4G35470","green","Encodes PIRL4, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.","PLANT INTRACELLULAR RAS GROUP-RELATED LRR 4 (PIRL4)","PLANT INTRACELLULAR RAS GROUP-RELATED LRR 4 (PIRL4)"]
["AT4G10790","green","Encodes a member of the plant UBX-domain containing (PUX) protein family. It is an integral lipid droplet (LD) protein that associates with a subpopulation of LDs during seed germination. It likely acts as an adaptor recruiting CDC48A to ubiquitinated oleosins, thus facilitating the dislocation of oleosins from LDs by the segregase activity of CDC48A.","PLANT UBX-DOMAIN CONTAINING 10 (PUX10)","PLANT UBX-DOMAIN CONTAINING 10 (PUX10)"]
["AT1G24560","green","Effector molecule of the plant-unique RAB5, ARA6. Acts in the vacuolar/endocytic trafficking pathway with canonical RAB5 and SYP. Promotes recruitment of VSP9a onto the endosome, which is required for efficient RAB5 activation. Colocalizes with RAB5 on endosomes, where it coordinates transport with canonical RAB5.","PLANT-UNIQUE RAB5 EFFECTOR 2 (PUF2)","PLANT-UNIQUE RAB5 EFFECTOR 2 (PUF2);MODIFIED TRANSPORT TO THE VACUOLE 9 (MTV9)"]
["AT5G05560","green","Encodes a subunit of the Arabidopsis thaliana E3 ubiquitin ligase complex that plays a synergistic role with APC4 both in female gametogenesis and in embryogenesis.","EMBRYO DEFECTIVE 2771 (EMB2771)","POLLEN CALCIUM-BINDING PROTEIN 1 (APC1);EMBRYO DEFECTIVE 2771 (EMB2771)"]
["AT3G18830","green","This gene encodes a plasma membrane-localized polyol/cyclitol/monosaccharide-H+-symporter. The symporter is able to catalyze the energy-dependent membrane passage of a wide range of linear polyols (three to six carbon backbone), of cyclic polyols (<i>myo</i>-inositol), and of numerous monosaccharides, including pyranose ring-forming and furanose ring-forming hexoses and pentoses. This gene belongs to a monosaccharide transporter-like (MST-like) superfamily.","POLYOL/MONOSACCHARIDE TRANSPORTER 5 (PMT5)","POLYOL TRANSPORTER 5 (ATPLT5);POLYOL/MONOSACCHARIDE TRANSPORTER 5 (PMT5);ARABIDOPSIS THALIANA POLYOL/MONOSACCHARIDE TRANSPORTER 5 (ATPMT5)"]
["AT5G03240","green","encodes ubiquitin that is attached to proteins destined for degradation. UBQ3 is most homologous with UBQ4, and is expressed in higher levels in vegetative tissue but lower levels in flowers than UBQ4. UBQ3 encodes different number of ubiquitins in different ecotypes. UBQ3 transcript level is modulated by UV-B and light/dark treatments.","POLYUBIQUITIN 3 (UBQ3)","POLYUBIQUITIN 3 (UBQ3)"]
["AT4G07410","green","Encodes a WD-40 protein expressed both during embryo development and postembryonically in the SAM and RAM that functions in the auxin pathway, integrating auxin signaling in the organization and maintenance of the SAM and RAM.","POPCORN (PCN)","POPCORN (PCN)"]
["AT4G32650","green","Encodes KAT3, a member of the Shaker family of voltage-gated potassium channel subunits. Does not form functional potassium channel on its own. Involved in down-regulating AKT1 and KAT1 channel activity by forming heteromers with AKT1 or KAT1. The Shaker family K+ ion channels include five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inwardly rectifying conductance): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500).","POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 3 (KAT3)","POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 3 (KAT3);ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1 (ATKC1); (KC1);A. THALIANA LOW-K+-TOLERANT 1 (AtLKT1)"]
["AT1G03140","green","PRP18a is one of two paralogs (the other being PRP18b) which are highly similar to the step II splicing factors in yeast. Loss of function mutations show defects in alternative splicing, mostly intron retention events.","PRE-MRNA PROCESSING FACTOR 18A (PRP18A)","PRE-MRNA PROCESSING FACTOR 18A (PRP18A)"]
["AT3G19840","green","Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.","PRE-MRNA-PROCESSING PROTEIN 40C (PRP40C)","PRE-MRNA-PROCESSING PROTEIN 40C (ATPRP40C);PRE-MRNA-PROCESSING PROTEIN 40C (PRP40C); (PRP40); (CA150)"]
["AT4G34440","green","Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807).","PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 5 (PERK5)","PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 5 (AtPERK5);PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 5 (PERK5)"]
["AT2G41500","green","Encodes LACHESIS (LIS), a protein with seven WD40 repeats. LIS is homologous to the yeast splicing factor PRP4 which is associated with the U4/U6 complex of the spliceosome. LIS is involved in a mechanism that prevents accessory cells from adopting gametic cell fate: lis mutant forms supernumerary egg cells.","LACHESIS (LIS)","PROLINE-RICH PROTEIN 4 (PRP4);LACHESIS (LIS); (EMB2776); (ATPRP4); (ATSAP60)"]
["AT5G06310","green","Encodes AtPOT1b. Note on nomenclature: different names have been given to Arabidopsis POT-like genes (Kuchar and Fajkus, 2004; Shakirov et al, 2005; Tani and Murata, 2005). According to a unifying nomenclature (Surovtseva et al, 2007), At2g05210 (previously named AtPOT1) is designated AtPOT1a, while At5g06310 (previously named AtPOT2) is designated AtPOT1b.","PROTECTION OF TELOMERES 1B (AtPOT1b)","PROTECTION OF TELOMERES 1B (AtPOT1b)"]
["AT1G74260","green","Encodes formylglycinamidine ribonucleotide synthase an enzyme involved in de novo purine biosynthesis. PUR4 is localizes to the chloroplast and mitochondria. Loss of PUR4 function affects male but not female gametophyte development.","PURINE BIOSYNTHESIS 4 (PUR4)","PURINE BIOSYNTHESIS 4 (PUR4)"]
["AT4G01026","green","Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2. PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of ABI1 and ABI2.","PYR1-LIKE 7 (PYL7)","PYR1-LIKE 7 (PYL7);REGULATORY COMPONENTS OF ABA RECEPTOR 2 (RCAR2)"]
["AT1G59900","green","encodes the e1 alpha subunit of the pyruvate dehydrogenase complex (PDC) The mRNA is cell-to-cell mobile.","PYRUVATE DEHYDROGENASE COMPLEX E1 ALPHA SUBUNIT (E1 ALPHA)","PYRUVATE DEHYDROGENASE COMPLEX E1 ALPHA SUBUNIT (AT-E1 ALPHA);PYRUVATE DEHYDROGENASE COMPLEX E1 ALPHA SUBUNIT (E1 ALPHA);IAR4-LIKE (IAR4L)"]
["AT2G01270","green","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the quiescin-sulfhydryl oxidase (QSOX) family, which possess an Erv1-like domain at the COOH terminus in addition to a TRX domain.","QUIESCIN-SULFHYDRYL OXIDASE 2 (QSOX2)","QUIESCIN-SULFHYDRYL OXIDASE 2 (AtQSOX2);QUIESCIN-SULFHYDRYL OXIDASE 2 (QSOX2)"]
["AT5G12210","green","Encodes the Rab geranylgeranyl transferase beta subunit that is essential for embryo and seed development.","RAB GERANYLGERANYL TRANSFERASE BETA SUBUNIT 1 (RGTB1)","RAB GERANYLGERANYL TRANSFERASE BETA SUBUNIT 1 (RGTB1);RAB GERANYLGERANYL TRANSFERASE BETA SUBUNIT 1 (AtRGTB1)"]
["AT2G06040","green","Contributes to UV tolerance through nucleotide excision repair.","RADIATION SENSITIVE 7A (RAD7A)","RADIATION SENSITIVE 7A (RAD7A)"]
["AT2G38560","green","Encodes RNA polymerase II transcript elongation factor TFIIS. Complements yeast TFIIS mutation. Mutant plants display essentially normal development, but they flower slightly earlier than the wild type and show clearly reduced seed dormancy; essential for heat stress adaptation.","TRANSCRIPT ELONGATION FACTOR IIS (TFIIS)","REDUCED DORMANCY 2 (RDO2);TRANSCRIPT ELONGATION FACTOR IIS (TFIIS)"]
["AT2G26590","green","regulatory particle non-ATPase 13;(source:Araport11)","REGULATORY PARTICLE NON-ATPASE 13 (RPN13)","REGULATORY PARTICLE NON-ATPASE 13 (RPN13)"]
["AT4G31420","green","Cytosolic ribosomal 60S-biogenesis factor.","REI1-LIKE 1 (REIL1)","REI1-LIKE 1 (REIL1)"]
["AT3G14230","green","encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.2). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.","RELATED TO AP2 2 (RAP2.2)","RELATED TO AP2 2 (RAP2.2)"]
["AT2G24490","green","Encodes a component of Replication Protein A. Component of transcriptional gene silencing which does not affect endogenous small RNA accumulation nor DNA methylation. Localized in the nucleus. Involved in DNA repair. Interacts physically with ROS1.","REPLICON PROTEIN A2 (RPA2)","REPLICON PROTEIN A2 (RPA2); (ATRPA2);SUPPRESSOR OF ROS1 (ROR1); (ATRPA32A); (RPA32A)"]
["AT5G58130","green","Encodes ROS3 (repressor of silencing 3), a RNA-binding protein required for DNA demethylation.","REPRESSOR OF SILENCING 3 (ROS3)","REPRESSOR OF SILENCING 3 (ROS3)"]
["AT2G35310","green","Encodes a member of the REM (Reproductive Meristem) gene family, a part of the B3 DNA-binding domain superfamily.","REPRODUCTIVE MERISTEM 23 (REM23)","REPRODUCTIVE MERISTEM 23 (REM23)"]
["AT5G13270","green","Encodes RARE1 (Required for accD RNA Editing 1), a trans-factor essential for C-to-U editing of the chloroplast accD transcript. RARE1 carries 15 PPR (pentatricopeptide repeat) motifs, an E/E+ and a DYW domain (C-terminal tripeptide).","REQUIRED FOR ACCD RNA EDITING 1 (RARE1)","REQUIRED FOR ACCD RNA EDITING 1 (RARE1)"]
["AT1G79670","green","Encodes a receptor-like kinase that does not contain an extracellular leucine-rich repeat domain. A novel type of dominant disease-resistance protein that confers resistance to a broad spectrum of Fusarium races.","RESISTANCE TO FUSARIUM OXYSPORUM 1 (RFO1)","RESISTANCE TO FUSARIUM OXYSPORUM 1 (RFO1); (WAKL22)"]
["AT1G12220","green","Resistance gene, mediates resistance against the bacterial pathogen Pseudomonas syringae. Contains a putative nucleotide binding site composed of kinase-1a (or P-loop), kinase-2a, and putative kinase-3a domains, 13 imperfect leucine-rich repeats, a potential leucine zipper, and two uncharacterized motifs that are well conserved in products of previously isolated R genes. Confers resistance to Pseudomonas syringae strains that express avrPphB.","RESISTANT TO P. SYRINGAE 5 (RPS5)","RESISTANT TO P. SYRINGAE 5 (RPS5)"]
["AT5G43930","green","Encodes a WD40 repeat domain-containing protein which negatively regulates plant resistance to Phytophthoravpathogens by modulating the biosynthesis of endogenous jasmonic acid and salicylic acid.","RESISTANT TO PHYTOPHTHORA 5 (RTP5)","RESISTANT TO PHYTOPHTHORA 5 (RTP5)"]
["AT3G16857","green","Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Also involved in cytokinin-dependent inhibition of hypocotyl elongation and cytokinin-dependent greening and shooting in tissue culture. ARR1, ARR10, and ARR12 are redundant regulators of drought response, with ARR1 being the most critical. ARR1, ARR10 and ARR12 redundantly bind to the promoter of WUSCHEL (WUS), directly activate its transcription. In parallel, ARR1, ARR10 and ARR12 repress the expression of YUCCAs (YUCs), which encode a key enzyme for auxin biosynthesis, indirectly promoting WUS induction. The regulation of ARR1, ARR10 and ARR12 on WUS and YUCs is required for regeneration and maintenance of shoot meristem.","RESPONSE REGULATOR 1 (RR1)","RESPONSE REGULATOR 1 (ARR1);RESPONSE REGULATOR 1 (RR1)"]
["AT3G12280","green","Encodes a retinoblastoma homologue RETINOBLASTOMA-RELATED protein (RBR or RBR1). RBR controls nuclear proliferation in the female gametophyte. Also required for correct differentiation of male gametophytic cell types. Regulates stem cell maintenance in Arabidopsis roots. Involved in the determination of cell cycle arrest in G1 phase after sucrose starvation. RBR1 is also involved in regulation of imprinted genes. Together with MSI1 it represses the expression of MET1. This in turn activates expression of the imprinted genes FIS2 and FWA. Functions as a positive regulator of the developmental switch from embryonic heterotrophic growth to autotrophic growth.ChIP studies indicate that one class of targets of RBR1 are transposable elements. Trichome regulator; target of GL3.","RETINOBLASTOMA-RELATED 1 (RBR1)","RETINOBLASTOMA-RELATED 1 (RBR1);RETINOBLASTOMA-RELATED (RBR); (RB);RETINOBLASTOMA-RELATED PROTEIN 1 (ATRBR1);RETINOBLASTOMA 1 (RB1)"]
["AT5G37260","green","Encodes a MYB family transcription factor Circadian 1 (CIR1). Involved in circadian regulation in Arabidopsis.","REVEILLE 2 (RVE2)","REVEILLE 2 (RVE2);CIRCADIAN 1 (CIR1)"]
["AT5G02840","green","Encodes RVE4, a homolog of the circadian rhythm regulator RVE8. rve4 rve6 rve8 triple mutants display an extremely long circadian period, with delayed and reduced expression of evening-phased clock genes. Involved in heat shock response.","LHY/CCA1-LIKE 1 (LCL1)","REVEILLE 4 (RVE4);LHY/CCA1-LIKE 1 (LCL1)"]
["AT4G01280","green","RVE5 is one of eleven homologous MYB-like transcription factors in Arabidopsis and a member of the RVE8 clade. Plays a minor role in clock regulation.","REVEILLE 5 (RVE5)","REVEILLE 5 (RVE5)"]
["AT2G37230","green","Ribosomal pentatricopeptide repeat protein","RIBOSOMAL PENTATRICOPEPTIDE REPEAT PROTEIN 5 (RPPR5)","RIBOSOMAL PENTATRICOPEPTIDE REPEAT PROTEIN 5 (RPPR5);RIBOSOMAL PROTEIN ML102 (ML102)"]
["ATMG00080","green","encodes a mitochondrial ribosomal protein L16, which is a constituent of the large ribosomal subunit","RIBOSOMAL PROTEIN L16 (RPL16)","RIBOSOMAL PROTEIN UL16M (UL16M);RIBOSOMAL PROTEIN L16 (RPL16)"]
["AT5G55140","green","ribosomal protein L30 family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL30M (UL30M)","RIBOSOMAL PROTEIN UL30M (UL30M)"]
["ATMG00090","green","ribosomal protein S3","RESISTANCE TO PSEUDOMONAS SYRINGAE 3 (RPS3)","RIBOSOMAL PROTEIN US3M (US3M)"]
["AT1G03360","green","Encodes a core subunit of the RNA exosome required for the processing of rRNA, several snoRNA and the degradation of aberrant transcripts.","RIBOSOMAL RNA PROCESSING 4 (RRP4)","RIBOSOMAL RNA PROCESSING 4 (ATRRP4);RIBOSOMAL RNA PROCESSING 4 (RRP4);SUPPRESSOR OF PAS2 2 (SOP2)"]
["AT5G22000","green","encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses.","RING-H2 GROUP F2A (RHF2A)","RING-H2 GROUP F2A (RHF2A)"]
["AT5G44180","green","Interacts with CHR11, CHR17, and ARID5, several known subunits of ISWI. JA biosynthesisis is positively regulated by this chromatin remodeling complex, thereby promoting stamen filament elongation.","RINGLET 2 (RLT2)","RINGLET 2 (RLT2)"]
["AT4G35800","green","Encodes the unique largest subunit of nuclear DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB1 and a homolog of the E. coli RNA polymerase beta prime subunit.","RNA POLYMERASE II LARGE SUBUNIT (NRPB1)","RNA POLYMERASE II LARGE SUBUNIT (NRPB1);RNA POLYMERASE II LARGE SUBUNIT (RPB1); (RNA_POL_II_LSRNA_POL_II_LS);RNA POLYMERASE II LARGE SUBUNIT (RNA_POL_II_LS)"]
["AT2G04270","green","Similar to E.coli endoribonuclease E. Functions as a ribonuclease, is located in the chloroplast, and is involved in chloroplast development. Loss of function mutants are white and arrest at the cotyledon stage. The phenotype is rescued by providing sucrose.","RNASE E/G-LIKE (RNEE/G)","RNASE E/G-LIKE (RNEE/G);RNASE E (RNE)"]
["AT3G54280","green","ROOT GROWTH DEFECTIVE 3;(source:Araport11)","ROOT GROWTH DEFECTIVE 3 (RGD3)","ROOT GROWTH DEFECTIVE 3 (RGD3)"]
["AT5G26760","green","Encodes RPAP2 IYO Mate (RIMA), a homologue of yeast and human proteins linked to nuclear import of selective cargo. Knockdown of RIMA causes delayed onset of cell differentiation.","RPAP2 IYO MATE (RIMA)","RPAP2 IYO MATE (RIMA)"]
["AT4G02990","green","Encodes BELAYA SMERT (BSM), a plastid-localized protein homologous to mitochondrial transcription termination factors (mTERF) found in animal. Mutant bsm cells are albino, are compromised in growth, and suffer defects in global plastidic gene expression. The mRNA is cell-to-cell mobile.","BELAYA SMERT (BSM)","RUGOSA 2 (RUG2);BELAYA SMERT (BSM)"]
["AT2G35800","green","Encodes a predicted calcium-dependent S-adenosyl methionine carrier.","S-ADENOSYL METHIONINE TRANSPORTER-LIKE (SAMTL)","S-ADENOSYL METHIONINE TRANSPORTER-LIKE (SAMTL)"]
["AT5G02020","green","Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).","SALT INDUCED SERINE RICH (SIS)","SALT INDUCED SERINE RICH (SIS)"]
["AT5G46410","green","Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4). The mRNA is cell-to-cell mobile.","SCP1-LIKE SMALL PHOSPHATASE 4 (SSP4)","SCP1-LIKE SMALL PHOSPHATASE 4 (SSP4)"]
["AT1G11180","green","Secretory carrier membrane protein (SCAMP) family protein;(source:Araport11)","SECRETORY CARRIER MEMBRANE PROTEIN 2 (SCAMP2)","SECRETORY CARRIER MEMBRANE PROTEIN 2 (SCAMP2); (ATSCAMP2)"]
["AT3G57520","green","SIP2 encodes a raffinose-specific alpha-galactosidase that catalyzes the breakdown of raffinose into alpha-galatose and sucrose. This enzyme may function in unloading raffinose from the phloem as part of sink metabolism. Although it was originally predicted to act as a raffinose synthase (RS), that activity was not observed for recombinant SIP2.","SEED IMBIBITION 2 (SIP2)","SEED IMBIBITION 2 (AtSIP2);SEED IMBIBITION 2 (SIP2);RAFFINOSE SYNTHASE 2 (RS2)"]
["AT4G35770","green","Senescence-associated gene that is strongly induced by phosphate starvation. Transcripts are differentially regulated at the level of mRNA stability at different times of day. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant.","SENESCENCE 1 (SEN1)","SENESCENCE-ASSOCIATED GENE 1 (SAG1);SENESCENCE 1 (SEN1);SENESCENCE ASSOCIATED GENE 1 (SEN1);ARABIDOPSIS THALIANA SENESCENCE 1 (ATSEN1);DARK INDUCIBLE 1 (DIN1); (SAG1)"]
["AT1G02840","green","SR34/SR1 is a plant homologue of the human general/alternative splicing factor SF2/ASF. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926.","SERINE/ARGININE-RICH PROTEIN SPLICING FACTOR 34 (SR34)","SERINE/ARGININE-RICH PROTEIN SPLICING FACTOR 34 (At-SR34); (ATSRP34); (SR1); (SRP34);SERINE/ARGININE-RICH PROTEIN SPLICING FACTOR 34 (SR34)"]
["AT4G34660","green","Critical non-ATG regulator of plant autophagy which colocalizes with representative ATG proteins during autophagosome biogenesis in growing pollen tubes.","SH3 DOMAIN-CONTAINING PROTEIN 2 (SH3P2)","SH3 DOMAIN-CONTAINING PROTEIN 2 (SH3P2)"]
["AT2G01940","green","Encodes a transcription factor that, together with IDD14 and IDD16, regulates auxin biosynthesis and transport and thus aerial organ morphogenesis and gravitropic responses. May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells.","SHOOT GRAVITROPISM 5 (SGR5)","SHOOT GRAVITROPISM 5 (SGR5);ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 15 (ATIDD15);INDETERMINATE(ID)-DOMAIN 15 (IDD15)"]
["AT3G29644","green","Natural antisense transcript overlaps with AT3G29642. Has been identified as a translated small open reading frame by ribosome profiling.","SHORT OPEN READING FRAME 29 (SORF29)","SHORT OPEN READING FRAME 29 (SORF29)"]
["AT4G01000","green","Ubiquitin-like superfamily protein;(source:Araport11)","SILENCING DEFECTIVE 2 (SDE2)","SILENCING DEFECTIVE 2 (SDE2)"]
["AT2G47980","green","Essential to the monopolar orientation of the kinetochores during meiosis.","SISTER-CHROMATID COHESION PROTEIN 3 (SCC3)","SISTER-CHROMATID COHESION PROTEIN 3 (SCC3);SISTER-CHROMATID COHESION PROTEIN 3 (ATSCC3)"]
["AT1G06110","green","SKP1/ASK-interacting protein 16;(source:Araport11)","SKP1/ASK-INTERACTING PROTEIN 16 (SKIP16)","SKP1/ASK-INTERACTING PROTEIN 16 (SKIP16)"]
["AT3G61415","green","SKP1-like 21;(source:Araport11)","SKP1-LIKE 21 (SK21)","SKP1-LIKE 21 (SK21);SKP1-LIKE 21 (ASK21)"]
["AT5G67240","green","small RNA degrading nuclease 3;(source:Araport11)","SMALL RNA DEGRADING NUCLEASE 3 (SDN3)","SMALL RNA DEGRADING NUCLEASE 3 (SDN3)"]
["AT3G48530","green","SNF1-related protein kinase regulatory subunit gamma 1;(source:Araport11)","SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1 (KING1)","SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA 1 (KING1); (KINgamma)"]
["AT4G11110","green","Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants.","SPA1-RELATED 2 (SPA2)","SPA1-RELATED 2 (SPA2)"]
["AT5G24160","green","squalene monooxygenase 6;(source:Araport11)","SQUALENE MONOXYGENASE 6 (SQE6)","SQUALENE MONOXYGENASE 6 (SQE6)"]
["AT2G47070","green","member of SPL gene family, encodes DNA binding proteins and putative transcription factors. All have the SBP-box, which encodes the SBP-domain, required for and sufficient for interaction with DNA.","SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 1 (SPL1)","SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 1 (SPL1)"]
["AT3G60030","green","squamosa promoter-binding protein-like 12;(source:Araport11)","SQUAMOSA PROMOTER-BINDING PROTEIN-LIKE 12 (SPL12)","SQUAMOSA PROMOTER-BINDING PROTEIN-LIKE 12 (SPL12)"]
["AT4G33620","green","Encodes a SUMO protease that, along with ASP1,is required for fertility as asp1/spf2 double mutants have defects in gametogenesis and embroygenesis.","SUMO PROTEASE RELATED TO FERTILITY2 (SPF2)","SUMO PROTEASE RELATED TO FERTILITY2 (SPF2)"]
["AT1G80680","green","Mutant has early-flowering phenotype, encodes a putative nucleoporin. Required for the activation of downstream defense pathways by the snc1 mutation. Involved in basal resistance against bacterial pathogens.","SUPPRESSOR OF AUXIN RESISTANCE 3 (SAR3)","SUPPRESSOR OF AUXIN RESISTANCE 3 (SAR3);PRECOCIOUS (PRE); (NUP96);MODIFIER OF SNC1,3 (MOS3)"]
["AT4G32910","green","SBB1 is a putative nucleoporin that is localized to the nuclear envelope. SBB1 was identified in a screen for supressors of BAK1, BKK1 mediated cell death.","SUPPRESSOR OF BAK1 BKK1 (SBB1)","SUPPRESSOR OF BAK1 BKK1 (SBB1);NUCLEOPORIN 85 (NUP85)"]
["AT4G08480","green","Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301.","MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 9 (MAPKKK9)","SUPPRESSOR OF MKK1 MKK2 1 (SUMM1);MAPK/ERK KINASE KINASE 2 (MEKK2);MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 9 (MAPKKK9)"]
["AT1G12280","green","Encodes a NB-LRR protein SUMM2 involved in defense response to bacterium.SUMM2 is downstream of MPK4 as mutants in summ2 suppress a number of mpk4 phenotypes.","SUPPRESSOR OF MKK1 MKK2 2 (SUMM2)","SUPPRESSOR OF MKK1 MKK2 2 (SUMM2)"]
["AT2G47620","green","Homologous to yeast SWI3 and a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3C, the other two members of the SWI3 family.A specific subunit of MINU1/2-associated SWI/SNF (MAS) complexes (PMID:36471048).","SWITCH/SUCROSE NONFERMENTING 3A (SWI3A)","SWITCH/SUCROSE NONFERMENTING 3A (ATSWI3A); (CHB1);SWITCH/SUCROSE NONFERMENTING 3A (SWI3A)"]
["AT4G17730","green","member of SYP2 Gene Family. Together with SYP23 interacts with Tobacco mosaic virus 126 kDa protein; required for normal local virus accumulation and spread.","SYNTAXIN OF PLANTS 23 (SYP23)","SYNTAXIN OF PLANTS 23 (SYP23); (ATSYP23)"]
["AT4G03330","green","member of SYP12 Gene Family, mutants have severe defects in root hair elongation.","SYNTAXIN OF PLANTS 123 (SYP123)","SYNTAXIN OF PLANTS 123 (SYP123); (ATSYP123)"]
["AT2G40140","green","Putative zinc-finger protein with ankyrin-repeat domains. Mutants demonstrate susceptibility to pathogens and decreased salt tolerance.","(CZF1)","TANDEM ZINC FINGER 10 (TZF10); (ATSZF2); (ATC3H29); (CZF1); (ZFAR1);(SALT-INDUCIBLE ZINC FINGER 2 (SZF2)"]
["AT4G34270","green","TOR signaling pathway protein; response to high temperature treatment.","TAP42 INTERACTING PROTEIN OF 41 KDA (TIP41)","TAP42 INTERACTING PROTEIN OF 41 KDA (TIP41)"]
["AT1G04950","green","Encodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6. Mutants are embryo lethal and transmission of the mutant allele through the male gametophyte is significantly reduced. This is due to reduced pollen tube growth of the mutant.","TATA BOX ASSOCIATED FACTOR II 59 (TAFII59)","TATA BOX ASSOCIATED FACTOR II 59 (TAFII59);TBP-ASSOCIATED FACTOR 6 (TAF6); (ATTAF6);EMBRYO DEFECTIVE 2781 (EMB2781)"]
["AT4G20280","green","Encodes TAF11, a putative TBP-associated factor (TBP: TATA binding protein).","TBP-ASSOCIATED FACTOR 11 (TAF11)","TBP-ASSOCIATED FACTOR 11 (TAF11)"]
["AT4G31720","green","Arabidopsis thaliana putative TBP-associated 15 kDa subunit protein (TAFII15)","TBP-ASSOCIATED FACTOR II 15 (TAFII15)","TBP-ASSOCIATED FACTOR II 15 (TAFII15);TBP-ASSOCIATED FACTOR 10 (TAF10);SALT TOLERANCE DURING GERMINATION 1 (STG1)"]
["AT1G04130","green","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808). Interacts with Hsp90/Hsp70 as co-chaperone.","TETRATRICOPEPTIDE REPEAT 2 (TPR2)","TETRATRICOPEPTIDE REPEAT 2 (TPR2); (AtTPR2)"]
["AT1G56440","green","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","TETRATRICOPEPTIDE REPEAT 5 (TPR5)","TETRATRICOPEPTIDE REPEAT 5 (TPR5);SPAGHETTI (SPAG)"]
["AT1G22940","green","Encodes a bifunctional enzyme required for thiamine (vitamin B1) biosynthesis. TH1 can phosphorylate HMP-P to produce HMP-PP, the pyrimidine heterocyclic subunit of thiamine. TH1 also catalyzes the condensation of HMP-PP and HET to form thiamine monophosphate (TMP). TH1 also appears capable of phosphorylating HMP based on E.coli mutant complementation assays. th1 mutants are thiamine auxotrophs that die as seedlings on unsupplemented media.","THIAMINE REQUIRING 1 (TH1)","THIAMINE REQUIRING 1 (TH1); (TH-1);THIAMINEE (THIE)"]
["AT5G61380","green","Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization. The mRNA is cell-to-cell mobile.","TIMING OF CAB EXPRESSION 1 (TOC1)","TIMING OF CAB EXPRESSION 1 (TOC1);TIMING OF CAB EXPRESSION 1 (AtTOC1);PSEUDO-RESPONSE REGULATOR 1 (PRR1); (APRR1)"]
["AT1G72900","green","Toll-Interleukin-Resistance (TIR) domain-containing protein;(source:Araport11)","TIR-NBS7 (TN7)","TIR-NBS7 (TN7)"]
["AT1G14740","green","Encodes a PHD-finger protein that, with TTA1, is redundantly required for MP-dependent embryonic root meristem initiation.","TITANIA 1 (TTA1)","TITANIA 1 (TTA1); (OBE3)"]
["AT5G01760","green","Encodes a member of the Arabidopsis TOL (TOM1-LIKE) family of ubiquitin binding proteins that acts redundantly in the recognition and further endocytic sorting of a PIN-FORMED (PIN)-type auxin carrier protein at the plasma membrane, modulating dynamic auxin distribution and associated growth responses.","TOM1-LIKE 7 (TOL7)","TOM1-LIKE 7 (TOL7)"]
["AT5G16750","green","Encodes a nucleolar localized WD-40 repeat protein that is preferentially expressed in dividing cells and is required for regulated division planes and embryo development.","TORMOZEMBRYO DEFECTIVE (TOZ)","TORMOZEMBRYO DEFECTIVE (TOZ)"]
["AT5G23080","green","Interacts with TATA-box binding protein 2. Contains domains with strong similarity to G-patch and SWAP domains, characteristic of RNA binding and processing proteins. Colocalizes with the splicing regulator SRp34 to subnuclear particles. It is an important component of miRNA and siRNA biogenesis. Mutants display developmental defects, including reduced plant height, polycotyly, and reduced vascularization. Strong genetic interaction between TGH and AMP1. The stability of TGH transcript was maintained by ac4C modification.TGH tanscript is highly acetylated in Arabidopsis.","TOUGH (TGH)","TOUGH (TGH)"]
["AT3G10330","green","Cyclin-like family protein;(source:Araport11)","TRANSCRIPTION FACTOR IIB 2 (TFIIB2)","TRANSCRIPTION FACTOR IIB 2 (TFIIB2); (ATTFIIB2)"]
["AT1G10840","green","Encodes eukaryotic initiation factor 3H1 subunit (TIF3H1).","TRANSLATION INITIATION FACTOR 3 SUBUNIT H1 (TIF3H1)","TRANSLATION INITIATION FACTOR 3 SUBUNIT H1 (TIF3H1)"]
["AT5G27640","green","encodes a member of eukaryotic translation initiation factor 3B family.","TRANSLATION INITIATION FACTOR 3B1 (TIF3B1)","TRANSLATION INITIATION FACTOR 3B1 (TIF3B1);EUKARYOTIC TRANSLATION INITIATION FACTOR 3B (EIF3B);ARABIDOPSIS THALIANA TRANSLATION INITIATION FACTOR 3B1 (ATTIF3B1);EUKARYOTIC TRANSLATION INITIATION FACTOR 3B1 (EIF3B-1); (ATEIF3B-1)"]
["AT2G37410","green","Mitochondrial inner membrane translocase. Together with AtTIM17-1, TIM17-2 has a long C-terminal extension not present in other TIMs. The extension is located in the outer membrane and so TIM17-2 links the inner and outer mitochondrial membranes. The C-terminal region is essential for protein import into mitochondria via the general import pathway but is not necessary for import via the carrier pathway.","TRANSLOCASE INNER MEMBRANE SUBUNIT 17-2 (TIM17-2)","TRANSLOCASE INNER MEMBRANE SUBUNIT 17-2 (ATTIM17-2);TRANSLOCASE OF THE INNER MEMBRANE 17 (TIM17);TRANSLOCASE INNER MEMBRANE SUBUNIT 17-2 (TIM17-2)"]
["AT4G02510","green","An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. The mRNA is cell-to-cell mobile.","TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 159 (TOC159)","TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 160 (TOC160); (ATTOC159);PLASTID PROTEIN IMPORT 2 (PPI2);TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 86 (TOC86);TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 159 (TOC159)"]
["AT1G23870","green","Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain. The mRNA is cell-to-cell mobile.","TREHALOSE-PHOSPHATASE/SYNTHASE 9 (TPS9)","TREHALOSE-PHOSPHATASE/SYNTHASE 9 (ATTPS9);TREHALOSE-PHOSPHATASE/SYNTHASE 9 (TPS9);TREHALOSE -6-PHOSPHATASE SYNTHASE S9 (TPS9)"]
["AT2G34070","green","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). TBL37 expression is regulated by MYC2 and activated in response to JA.","TRICHOME BIREFRINGENCE-LIKE 37 (TBL37)","TRICHOME BIREFRINGENCE-LIKE 37 (TBL37)"]
["AT3G02320","green","Involved in posttranscriptional modification of tRNA.","TRNA METHYLTRANSFERASE 1A (TRM1A)","TRNA METHYLTRANSFERASE 1A (TRM1A); (ATTRM1A)"]
["AT2G28450","green","Encodes a tRNA-specific methyltransferase that together with TRM2A is one of two main writer enzymes for m5U.","TRNA METHYLTRANSFERASE 2B (TRM2B)","TRNA METHYLTRANSFERASE 2B (TRM2B); (ATC3H24)"]
["AT1G47270","green","Member of TLP family of tubby like proteins that also contain an F-Box. Localized to the plasma membrane.","TUBBY LIKE PROTEIN 6 (TLP6)","TUBBY LIKE PROTEIN 6 (AtTLP6);TUBBY LIKE PROTEIN 6 (TLP6)"]
["AT1G64040","green","Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers.","TYPE ONE SERINE/THREONINE PROTEIN PHOSPHATASE 3 (TOPP3)","TYPE ONE SERINE/THREONINE PROTEIN PHOSPHATASE 3 (TOPP3);HOPZ1A INTERACTOR 1 (ZIN1)"]
["AT1G08030","green","Encodes a tyrosylprotein sulfotransferase (TPST). This protein is a 500-aa type I transmembrane protein that shows no sequence similarity to animal TPSTs. Activity confirmed by protein expression in yeast. TPST is expressed throughout the plant body, and the highest levels of expression are in the root apical meristem. TPST acts in the auxin pathway to maintain postembryonic root stem cell niche by defining the expression of the PLETHORA stem cell transcription factor genes. A loss-of-function mutant TPST displayed a marked dwarf phenotype accompanied by stunted roots, pale green leaves, reduction in higher order veins, early senescence, and a reduced number of flowers and siliques. TPST suppresses ethylene production through the action of PSK (phytosulfokine).","TYROSYLPROTEIN SULFOTRANSFERASE (TPST)","TYROSYLPROTEIN SULFOTRANSFERASE (TPST);HYPERSENSITIVE TO PI STARVATION 7 (HPS7);ACTIVE QUIESCENT CENTER1 (AQC1)"]
["AT2G30260","green","encodes U2B\", which is a component of the U2 snRNP complex. Its precise role in pre-mRNA splicing is still unknown. It has been suggested that U2B0 may not be required for the splicing reaction itself but may have a role in U2 snRNP biogenesis. Deletion analysis of the U2B0 gene fusion has identified the N-terminal RNP-80 motif as sufficient for localization to the coiled body and the nucleus.","U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B (U2B'')","U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B (U2B'')"]
["AT1G21610","green","wound-responsive family protein;(source:Araport11)","UBINUCLEIN 1 (UBN1)","UBINUCLEIN 1 (UBN1)"]
["AT3G08700","green","ubiquitin-conjugating enzyme 12;(source:Araport11)","UBIQUITIN-CONJUGATING ENZYME 12 (UBC12)","UBIQUITIN-CONJUGATING ENZYME 12 (UBC12)"]
["AT1G04860","green","Encodes a ubiquitin-specific protease.","UBIQUITIN-SPECIFIC PROTEASE 2 (UBP2)","UBIQUITIN-SPECIFIC PROTEASE 2 (UBP2); (ATUBP2)"]
["AT5G57990","green","Encodes a ubiquitin-specific protease.","UBIQUITIN-SPECIFIC PROTEASE 23 (UBP23)","UBIQUITIN-SPECIFIC PROTEASE 23 (UBP23)"]
["AT4G39910","green","Encodes a nuclear ubiquitin-specific protease.","UBIQUITIN-SPECIFIC PROTEASE 3 (UBP3)","UBIQUITIN-SPECIFIC PROTEASE 3 (ATUBP3);UBIQUITIN-SPECIFIC PROTEASE 3 (UBP3)"]
["AT3G11340","green","Encodes a uridine diphosphate-dependent glucosyltransferase that conjugates isoleucic acid and modulates plant defense via glucosylation of N-hydroxypipecolic acid.","UDP-DEPENDENT GLYCOSYLTRANSFERASE 76B1 (UGT76B1)","UDP-DEPENDENT GLYCOSYLTRANSFERASE 76B1 (UGT76B1)"]
["AT3G21780","green","Encodes a protein with UDP-glucosyl transferase activity that was shown to preferentially glucosylates abscisic acid (ABA), and not its catabolites. Moreover, UGT71B6 was shown to have a strict preference for the naturally-occurring ABA enantiomer, (+)-ABA, and not its 'unnatural' relative, (-)-ABA. This is in contrast to the other identified UGT genes catalyzing the glucosylation of ABA which were shown to accept both stereoisomers as substrates.","UDP-GLUCOSYL TRANSFERASE 71B6 (UGT71B6)","UDP-GLUCOSYL TRANSFERASE 71B6 (UGT71B6)"]
["AT3G53160","green","UGT73C7 is induced by pathogen infection. It glycosylates p-coumaric acid and ferulic acid to modulate phenylpropanoid metabolism and induce innate immune response.","UDP-GLUCOSYL TRANSFERASE 73C7 (UGT73C7)","UDP-GLUCOSYL TRANSFERASE 73C7 (UGT73C7)"]
["AT5G05860","green","Encodes a cytokinin N-glucosyltransferase that is involved in cytokinin homeostasis and cytokinin response in planta through cytokinin N-glucosylation. Expression is induced by ABA, mannitol and drought stress. Analysis of overexpressors and loss of function mutants indicate a role in response to osmotic and drought stress.","UDP-GLUCOSYL TRANSFERASE 76C2 (UGT76C2)","UDP-GLUCOSYL TRANSFERASE 76C2 (UGT76C2)"]
["AT1G06890","green","UXT3 is a member of the NST-KT subfamily of nucleotide/sugar transporters. It is localized to the golgi and functions as a UDP-Xyl transporter.","UDP-XYLOSE TRANSPORTER3 (UXT3)","UDP-XYLOSE TRANSPORTER3 (UXT3)"]
["AT2G31660","green","SAD2 (super sensitive to ABA and drought 2) encodes an importin beta-domain family protein likely to be involved in nuclear transport in ABA signaling. Subcellular localization of GFP-tagged SAD2 showed a predominantly nuclear localization, consistent with a role for SAD2 in nuclear transport. Mutation of SAD2 in Arabidopsis alters abscisic acid sensitivity. SAD2 was ubiquitously expressed at low levels in all tissues except flowers. SAD2 expression was not induced by ABA or stress. Loss of function mutations in SAD2 exhibit increased tolerance for UV stress, increased production of UV protective secondary metabolites and suppression of nuclear localization of MYB4 (a repressor of UV stress response genes). Regulates microRNA activity. Defective trichome activity.","SUPER SENSITIVE TO ABA AND DROUGHT2 (SAD2)","UNARMED 9 (URM9);ENHANCED MIRNA ACTIVITY 1 (EMA1);SUPER SENSITIVE TO ABA AND DROUGHT2 (SAD2);GROWTH INHIBITION RELIEVED 1 (GIR1)"]
["AT1G29120","green","Hydrolase-like protein family;(source:Araport11)","UP9 (UP9)","UP9 (UP9)"]
["AT2G45620","green","Nucleotidyltransferase family protein involved in transcript polyadenylation. TUTase which connects decapping activators and prevents the accumulation of excessively deadenylated mRNAs to avoid siRNA biogenesis.","UTP:RNA URIDYLYLTRANSFERASE 1 (URT1)","UTP:RNA URIDYLYLTRANSFERASE 1 (URT1)"]
["AT4G29380","green","The gene encodes phosphatidylinositol 3- kinase involved in the development and germination of pollen through the biosynthesis of phosphatidylinositol 3-phosphate (PI3P). The mRNA is cell-to-cell mobile.","VACUOLAR PROTEIN SORTING 15 (VPS15)","VACUOLAR PROTEIN SORTING 15 (VPS15);ARABIDOPSIS THALIANA VACUOLAR PROTEIN SORTING 15 (AtVPS15);MODIFIED TRANSPORT TO THE VACUOLE 11 (MTV11)"]
["AT5G61150","green","Encodes highly hydrophilic protein involved in positively regulating FLC expression. Mutants are early flowering and show a loss of FLC expression in the absence of cold. Member of PAF-C complex.","VERNALIZATION INDEPENDENCE 4 (VIP4)","VERNALIZATION INDEPENDENCE 4 (VIP4)"]
["AT1G61040","green","Encodes a yeast Paf1C subunit homolog required for the expression of the MADS box gene FLC and other members of the FLC/MAF MADS-box gene family. Member of PAF-C complex.","VERNALIZATION INDEPENDENCE 5 (VIP5)","VERNALIZATION INDEPENDENCE 5 (VIP5)"]
["AT5G05550","green","Encodes trihelix-domain transcription factor VFP5. Interacts with agrobacterium virulence protein VirF.","VFP5 (VFP5)","VFP5 (VFP5);EIN2 NUCLEAR ASSOCIATED PROTEIN 2 (ENAP2); (At5g05550)"]
["AT5G67250","green","Encodes an SKP1 interacting partner (SKIP2).Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB1,2, and 3. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes.","SKP1/ASK1-INTERACTING PROTEIN 2 (SKIP2)","VIER F-BOX PROTEINE 4 (VFB4);SKP1/ASK1-INTERACTING PROTEIN 2 (SKIP2)"]
["AT1G56180","green","VIR3 encodes a putative chloroplast metalloprotease that is localized to the thylakoid membrane. The vir3-1 mutant came out of a genetic suppressor screen of the Arabidopsis variegation mutant yellow variegated (var2). The suppressor displayed an additional virescent phenotype, i.e. the bases of young leaves were yellow, and leaf color gradually turned to green toward the leaf tips.","VIRESCENT3-1 (VIR3)","VIRESCENT3-1 (VIR3); (VIR3)"]
["AT1G16090","green","Encodes a truncated WAK-like kinase that is predicted to be a secreted protein.","WALL ASSOCIATED KINASE-LIKE 7 (WAKL7)","WALL ASSOCIATED KINASE-LIKE 7 (WAKL7)"]
["AT2G22680","green","Zinc finger (C3HC4-type RING finger) family protein;(source:Araport11)","WAV3 HOMOLOG 1 (WAVH1)","WAV3 HOMOLOG 1 (WAVH1)"]
["AT1G71260","green","Encodes WHY2, a homolog of the potato p24 protein. It shares the conserved KGKAAL domain, a putative DNA-binding domain, with potato p24 and is localized to mitochondria and not the nucleus. WHY2 is a member of the Whirly family proteins present mainly in the plant kingdom performing various activities related to DNA metabolism. Crystal structure of Solanum tuberosum WHY2, a close homolog of Arabidopsis WHY2, reveal that Whirly proteins bind to single strand DNA to promote accurate repair of DNA double-strand breaks over an error-prone repair pathway.","WHIRLY 2 (ATWHY2)","WHIRLY 2 (ATWHY2);WHIRLY 2 (WHY2)"]
["AT4G05070","green","Member of the wound-induced polypeptide (WIP) family. Positively regulates plant resistance against Pst DC3000 by enhancing PTI responses.","WOUND-INDUCED POLYPEPTIDE 2 (WIP2)","WOUND-INDUCED POLYPEPTIDE 2 (WIP2)"]
["AT2G23320","green","Encodes WRKY DNA-binding protein 15 (WRKY15).","WRKY DNA-BINDING PROTEIN 15 (WRKY15)","WRKY DNA-BINDING PROTEIN 15 (WRKY15); (ATWRKY15)"]
["AT4G31800","green","Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Constitutive expression of WRKY18 enhanced resistance to P. syringae, but its coexpression with WRKY40 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two. The mRNA is cell-to-cell mobile.","WRKY DNA-BINDING PROTEIN 18 (WRKY18)","WRKY DNA-BINDING PROTEIN 18 (WRKY18);ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 18 (ATWRKY18)"]
["AT3G21175","green","member of a novel family of plant-specific GATA-type transcription factors.","ZIM-LIKE 1 (ZML1)","ZIM-LIKE 1 (ZML1);GATA TRANSCRIPTION FACTOR 24 (GATA24);ZIM LIKE 1 (ZML1); (TIFY2B)"]
["AT1G51600","green","member of a novel family of plant-specific GATA-type transcription factors.","ZIM-LIKE 2 (ZML2)","ZIM-LIKE 2 (ZML2); (TIFY2A);GATA TRANSCRIPTION FACTOR 28 (GATA28)"]
["ATMG01120","green",{"$error":"#N/A"},{"$error":"#N/A"},{"$error":"#N/A"}]
["AT2G38465","greenyellow","hypothetical protein;(source:Araport11)"]
["AT3G54000","greenyellow","TIP41-like protein;(source:Araport11)"]
["AT5G45310","greenyellow","coiled-coil protein;(source:Araport11)"]
["AT5G01300","greenyellow","PEBP (phosphatidylethanolamine-binding protein) family protein;(source:Araport11)"]
["AT1G28540","greenyellow","Tail-anchored (TA) OEP membrane protein which possesses a single C-terminal transmembrane domain targeting post-translationally to plastids."]
["AT3G03790","greenyellow","ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein;(source:Araport11)"]
["AT5G44310","greenyellow","Late embryogenesis abundant protein (LEA) family protein;(source:Araport11)"]
["AT1G47980","greenyellow","desiccation-like protein;(source:Araport11)"]
["AT5G01670","greenyellow","NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11)"]
["AT5G65550","greenyellow","UDP-Glycosyltransferase superfamily protein;(source:Araport11)"]
["AT1G30860","greenyellow","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G03990","greenyellow","Long-chain fatty alcohol dehydrogenase family protein;(source:Araport11)"]
["AT1G72100","greenyellow","late embryogenesis abundant domain-containing protein / LEA domain-containing protein;(source:Araport11)"]
["AT5G55840","greenyellow","PPR superfamily protein;(source:Araport11)"]
["AT5G60760","greenyellow","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT2G38905","greenyellow","Low temperature and salt responsive protein family;(source:Araport11)"]
["AT1G04560","greenyellow","AWPM-19-like family protein;(source:Araport11)"]
["AT1G02700","greenyellow","GATA transcription factor-like protein;(source:Araport11)"]
["AT1G69800","greenyellow","Cystathionine beta-synthase (CBS) protein;(source:Araport11)"]
["AT1G27990","greenyellow","transmembrane protein;(source:Araport11)"]
["AT5G53220","greenyellow","hypothetical protein;(source:Araport11)"]
["AT5G58540","greenyellow","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G16770","greenyellow","hypothetical protein;(source:Araport11)"]
["AT5G04010","greenyellow","F-box family protein;(source:Araport11)"]
["AT3G24180","greenyellow","Beta-glucosidase, GBA2 type family protein;(source:Araport11)"]
["AT2G18540","greenyellow","RmlC-like cupins superfamily protein;(source:Araport11)"]
["AT1G22600","greenyellow","Late embryogenesis abundant protein (LEA) family protein;(source:Araport11)"]
["AT4G12680","greenyellow","transmembrane protein;(source:Araport11)"]
["AT3G05260","greenyellow","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT5G07330","greenyellow","Mutant has enhanced sensitivity to NaHCO3."]
["AT5G17580","greenyellow","Phototropic-responsive NPH3 family protein;(source:Araport11)"]
["AT1G25422","greenyellow","hypothetical protein;(source:Araport11)"]
["AT5G45690","greenyellow","histone acetyltransferase (DUF1264);(source:Araport11)"]
["AT4G03200","greenyellow","catalytics;(source:Araport11)"]
["AT3G15280","greenyellow","hypothetical protein;(source:Araport11)"]
["AT5G23460","greenyellow","hypothetical protein;(source:Araport11)"]
["AT4G21020","greenyellow","Late embryogenesis abundant protein (LEA) family protein;(source:Araport11)"]
["AT2G19320","greenyellow","hypothetical protein;(source:Araport11)"]
["AT4G16160","greenyellow","Homologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family. Two OEP16 genes are closely related to each other and are conserved in all land plants, OEP16-2, also named OEP16-S, and OEP16-1 (renamed OEP16-L) are result of the gene duplication event that occurred prior to divergence of bryophytes and seed plants. Predominantly expressed in seed and is not inducible by cold treatment. atOEP16-S gained an additional exon. The promoter region of atOEP16-S (but not atOEP16-L) contains multiple G-box ABA-responsive elements. The atOEP16-S promoter conferred developmentally regulated seed- and pollen-specific GUS expression in tobacco.","(ATOEP16-2)","(ATOEP16-2); (ATOEP16-S)"]
["AT4G12130","greenyellow","Encodes a mitochondrial COG0354 protein that requires folate for its function in Fe/S cluster biogenesis.","(COG0354)","(COG0354)"]
["AT3G19920","greenyellow","BTB/POZ domain protein;(source:Araport11)","(LDPS)","(LDPS)"]
["AT3G56350","greenyellow","Iron/manganese superoxide dismutase family protein;(source:Araport11)","(MSD2)","(MSD2)"]
["AT3G56320","greenyellow","PAP/OAS1 substrate-binding domain superfamily;(source:Araport11)","(NTP7)","(NTP7)"]
["AT3G17520","greenyellow","Late embryogenesis abundant protein (LEA) family protein;(source:Araport11)","(SSLEA)","(SSLEA); (LEA30)"]
["AT1G13740","greenyellow","Encodes a member of a small plant-specific gene family whose members interact with ABI5 and appear to be involved in mediating stress responses. AFP2 mutants affect a number of ABA mediated processes such as germination and response to osmotic and sugar stress. AFP2 nuclear localization is stress dependent.","ABI FIVE BINDING PROTEIN 2 (AFP2)","ABI FIVE BINDING PROTEIN 2 (AFP2);LITTLE NINJA (LNJ)"]
["AT5G57790","greenyellow","Encodes a nuclear localized protein of unknown function that is involved in pollen and embryo sac development.","ABORTED GAMETOPHYTE 1 (AOG1)","ABORTED GAMETOPHYTE 1 (AOG1)"]
["AT1G70580","greenyellow","Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro.","ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2 (AOAT2)","ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2 (AOAT2);GLUTAMATE:GLYOXYLATE AMINOTRANSFERASE 2 (GGT2)"]
["AT3G03310","greenyellow","lecithin:cholesterol acyltransferase 3;(source:Araport11)","LECITHIN:CHOLESTEROL ACYLTRANSFERASE 3 (LCAT3)","ARABIDOPSIS LECITHIN:CHOLESTEROL ACYLTRANSFERASE 3 (ATLCAT3);LECITHIN:CHOLESTEROL ACYLTRANSFERASE 3 (LCAT3)"]
["AT5G62490","greenyellow","Part of the AtHVA22 family. Protein expression is ABA- and stress-inducible.","HVA22 HOMOLOGUE B (HVA22B)","ARABIDOPSIS THALIANA HVA22 HOMOLOGUE B (ATHVA22B);HVA22 HOMOLOGUE B (HVA22B)"]
["AT3G51810","greenyellow","Encodes a ABA-inducible protein that accumulates during seed maturation, in parallel with its corresponding mRNA but with a 3 d delay. During germination, AtEm1 protein undergoes two successive cleavages before being degraded. Both proteins are more stable than the corresponding mRNA. The gene can be activated by the basic leucine zipper transcription factor ABI5. Expressed predominantly in provascular tissues with the strongest expression in the root tip.","LATE EMBRYOGENESIS ABUNDANT 1 (EM1)","ARABIDOPSIS THALIANA LATE EMBRYOGENESIS ABUNDANT 1 (ATEM1);GUANINE NUCLEOTIDE EXCHANGE FACTOR FOR ADP RIBOSYLATION FACTORS 1 (GEA1); (AT3);LATE EMBRYOGENESIS ABUNDANT 1 (EM1)"]
["AT2G19900","greenyellow","The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME1 is expressed in response to developmental and cell-specific signals. The enzyme is active in vitro and appears to function as a homohexamer or homooctamer. It is believed to be a cytosolic protein.","NADP-MALIC ENZYME 1 (NADP-ME1)","ARABIDOPSIS THALIANA NADP-MALIC ENZYME 1 (ATNADP-ME1);NADP-MALIC ENZYME 1 (NADP-ME1)"]
["AT1G08570","greenyellow","Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase. The mRNA is cell-to-cell mobile.","ATYPICAL CYS HIS RICH THIOREDOXIN 4 (ACHT4)","ATYPICAL CYS HIS RICH THIOREDOXIN 4 (ACHT4)"]
["AT4G04870","greenyellow","Encodes a protein with cardiolipin synthase activity that is localized to the mitochondiria.","CARDIOLIPIN SYNTHASE (CLS)","CARDIOLIPIN SYNTHASE (CLS)"]
["AT1G80090","greenyellow","Cystathionine beta-synthase (CBS) family protein;(source:Araport11)","CBS DOMAIN CONTAINING PROTEIN 4 (CBSX4)","CBS DOMAIN CONTAINING PROTEIN 4 (CBSX4)"]
["AT1G54870","greenyellow","ChlADR is an aldehyde reductase that catalyzes the reduction of the aldehyde carbonyl groups on saturated and alpha,beta-unsaturated aldehydes with more than 5 carbons in vitro. The N-terminal region of this protein directs GFP to the chloroplast where where ChlADR likely helps to maintain the photosynthetic process by detoxifying reactive carbonyls formed during lipid peroxidation. In addition, this enzyme can also reduce cis-3-hexenal, a major plant volatile compound that contributes to green leaf odor, as well as methylglyoxal in vitro.","CHLOROPLAST ALDEHYDE REDUCTASE (CHLADR)","CHLOROPLAST ALDEHYDE REDUCTASE (CHLADR)"]
["AT4G11310","greenyellow","cysteine proteinase precursor-like protein","CYSTEINE PROTEASE 1 (CP1)","CYSTEINE PROTEASE 1 (CP1); (ATCP1)"]
["AT2G33520","greenyellow","cysteine-rich/transmembrane domain protein A;(source:Araport11)","CYSTEINE-RICH TRANSMEMBRANE MODULE 7 (ATHCYSTM7)","CYSTEINE-RICH TRANSMEMBRANE MODULE 7 (ATHCYSTM7)"]
["AT5G58760","greenyellow","Encodes a DDB1a interacting protein DDB2 required for UV-B tolerance and genomic integrity.","DAMAGED DNA BINDING 2 (DDB2)","DAMAGED DNA BINDING 2 (DDB2)"]
["AT2G21490","greenyellow","dehydrin LEA;(source:Araport11)","DEHYDRIN LEA (LEA)","DEHYDRIN LEA (LEA)"]
["AT1G07645","greenyellow","Ortholog of HC205/ Xhdsi-1voc from Xerophyta humilis. Member of VOC metalloenzyme superfamily. Not involved in response to abiotic stress, unlike its Xerophyta ortholog.","DESICCATION-INDUCED 1VOC SUPERFAMILY PROTEIN (DSI-1VOC)","DESICCATION-INDUCED 1VOC SUPERFAMILY PROTEIN (ATDSI-1VOC);DESICCATION-INDUCED 1VOC SUPERFAMILY PROTEIN (DSI-1VOC)"]
["AT2G36640","greenyellow","Encodes putative phosphotyrosine protein belonging to late embryogenesis abundant (LEA) protein in group 3 that might be involved in maturation and desiccation tolerance of seeds. RFLP and CAPS mapping place it on chromosome 4 but the nucleotide sequence maps it to chromosome 2.","EMBRYONIC CELL PROTEIN 63 (ECP63)","EMBRYONIC CELL PROTEIN 63 (ECP63);EMBRYONIC CELL PROTEIN 63 (ATECP63)"]
["AT1G48110","greenyellow","evolutionarily conserved C-terminal region 7;(source:Araport11)","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 7 (ECT7)","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 7 (ECT7)"]
["AT5G10000","greenyellow","ferredoxin 4;(source:Araport11)","FERREDOXIN 4 (FD4)","FERREDOXIN 4 (FD4);FERREDOXIN 4 (ATFD4)"]
["AT3G11050","greenyellow","ferritin 2;(source:Araport11)","FERRITIN 2 (FER2)","FERRITIN 2 (ATFER2);FERRITIN 2 (FER2)"]
["AT4G09600","greenyellow","One of GASA gene family which is related to a GA-stimulated transcript (GAST) from tomato.","GAST1 PROTEIN HOMOLOG 3 (GASA3)","GAST1 PROTEIN HOMOLOG 3 (GASA3)"]
["AT1G31750","greenyellow","proline-rich family protein;(source:Araport11)","GLYCINE AND PROLINE RICH PROTEIN 1 (GPRP1)","GLYCINE AND PROLINE RICH PROTEIN 1 (GPRP1)"]
["AT5G66110","greenyellow","Heavy metal transport/detoxification superfamily protein;(source:Araport11)","HEAVY METAL ASSOCIATED ISOPRENYLATED PLANT PROTEIN 27 (HIPP27)","HEAVY METAL ASSOCIATED ISOPRENYLATED PLANT PROTEIN 27 (HIPP27);HEAVY METAL ASSOCIATED PROTEIN 55 (ATHMP55)"]
["AT3G22740","greenyellow","homocysteine S-methyltransferase (HMT3)","HOMOCYSTEINE S-METHYLTRANSFERASE 3 (HMT3)","HOMOCYSTEINE S-METHYLTRANSFERASE 3 (HMT3)"]
["AT2G42560","greenyellow","Late embryogenesis protein. Based on in vitro studies, likely plays a role in stablizing membranes in response to freezing stress.","LATE EMBRYOGENESIS ABUNDANT 25 (LEA25)","LATE EMBRYOGENESIS ABUNDANT 25 (LEA25)"]
["AT1G32560","greenyellow","Encodes LEA4-1, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment.","LATE EMBRYOGENESIS ABUNDANT 4-1 (AtLEA4-1)","LATE EMBRYOGENESIS ABUNDANT 4-1 (LEA4-1);LATE EMBRYOGENESIS ABUNDANT 4-1 (AtLEA4-1)"]
["AT3G15670","greenyellow","Late embryogenesis abundant protein (LEA) family protein;(source:Araport11)","LATE EMBRYOGENESIS ACCUMULATING 76 (LEA76)","LATE EMBRYOGENESIS ACCUMULATING 76 (LEA76); (LEA29)"]
["AT2G33070","greenyellow","Encodes a nitrile-specifier protein NSP2. NSP2 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation.","NITRILE SPECIFIER PROTEIN 2 (NSP2)","NITRILE SPECIFIER PROTEIN 2 (NSP2)"]
["AT3G29670","greenyellow","Encodes a malonyltransferase that may play a role in phenolic xenobiotic detoxification. The mRNA is cell-to-cell mobile.","PHENOLIC GLUCOSIDE MALONYLTRANSFERASE 2 (PMAT2)","PHENOLIC GLUCOSIDE MALONYLTRANSFERASE 2 (PMAT2)"]
["AT5G58650","greenyellow","Encodes PSY1, an18-aa tyrosine-sulfated glycopeptide that promotes cellular proliferation and expansion. PSY1 is widely expressed in various tissues, including shoot apical meristem, and is highly up-regulated by wounding. Perception of PSY1 depends on At1g72300, a leucine-rich repeat receptor kinase (LRR-RK).","PLANT PEPTIDE CONTAINING SULFATED TYROSINE 1 (PSY1)","PLANT PEPTIDE CONTAINING SULFATED TYROSINE 1 (PSY1)"]
["AT5G53280","greenyellow","An integral outer envelope membrane protein (as its homolog PDV2), component of the plastid division machinery. Similar to ARC5, PDV1 localized to a discontinuous ring at the division site in wild-type plants. PDV1 and PDV2 are required for localization of ARC5 at the chloroplast division site. Topological analysis showed that the large N-terminal region of PDV1 upstream of the transmembrane helix bearing a putative coiled-coil domain is exposed to the cytosol. Mutation of the conserved PDV1 C-terminal Gly residue did not block PDV1 insertion into the outer envelope membrane but did abolish its localization to the division site. The mRNA is cell-to-cell mobile.","PLASTID DIVISION1 (PDV1)","PLASTID DIVISION1 (PDV1)"]
["AT5G22470","greenyellow","PARP3 is one of three canonical PARPs in Arabidopsis.","POLY(ADP-RIBOSE) POLYMERASE 3 (PARP3)","POLY(ADP-RIBOSE) POLYMERASE 3 (PARP3); (ATPARP3)"]
["AT1G03120","greenyellow","responsive to abscisic acid 28;(source:Araport11)","RESPONSIVE TO ABSCISIC ACID 28 (RAB28)","RESPONSIVE TO ABSCISIC ACID 28 (ATRAB28);RESPONSIVE TO ABSCISIC ACID 28 (RAB28)"]
["AT3G12960","greenyellow","seed maturation protein;(source:Araport11)","SEED MATURATION PROTEIN 1 (SMP1)","SEED MATURATION PROTEIN 1 (SMP1)"]
["AT5G65165","greenyellow","One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Transcripts appear during seed maturation, persist through desiccation, are abundant in dry seeds, and markedly decline during germination.","SUCCINATE DEHYDROGENASE 2-3 (SDH2-3)","SUCCINATE DEHYDROGENASE 2-3 (SDH2-3)"]
["AT3G58450","greenyellow","USP domain containing protein, member of the universal stress protein family, regulated by ABA and possibly regulated by the ABA-dependent transcription factor AREB/ABF. Involved in the regulation of seed germination.","UNIVERSAL STRESS PROTEIN (USP)","UNIVERSAL STRESS PROTEIN (USP);GERMINATION-RELATED UNIVERSAL STRESS PROTEIN (GRUSP)"]
["AT5G53140","grey","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT4G13730","grey","Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11)"]
["AT2G44360","grey","ecotropic viral integration site protein;(source:Araport11)"]
["AT4G09750","grey","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT1G67310","grey","Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domain;(source:Araport11)"]
["AT3G57470","grey","Insulinase (Peptidase family M16) family protein;(source:Araport11)"]
["AT5G15780","grey","Pollen Ole e 1 allergen and extensin family protein;(source:Araport11)"]
["AT2G23520","grey","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11)"]
["AT5G07730","grey","transmembrane protein;(source:Araport11)"]
["AT1G79540","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G57080","grey","transmembrane protein;(source:Araport11)"]
["AT1G34570","grey","Essential protein Yae1, N-terminal;(source:Araport11)"]
["AT5G22550","grey","transmembrane protein, putative (DUF247);(source:Araport11)"]
["AT1G03730","grey","pyrroline-5-carboxylate reductase;(source:Araport11)"]
["AT3G05932","grey","Potential natural antisense gene, locus overlaps with AT3G05930"]
["AT5G28400","grey","embryo defective protein;(source:Araport11)"]
["AT3G05937","grey","hypothetical protein;(source:Araport11)"]
["AT1G29465","grey","transmembrane protein;(source:Araport11)"]
["AT4G39363","grey","snoRNA;(source:Araport11)"]
["AT4G39364","grey","snoRNA;(source:Araport11)"]
["AT5G08440","grey","transmembrane protein;(source:Araport11)"]
["AT3G23370","grey","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT4G33800","grey","hypothetical protein;(source:Araport11)"]
["AT5G47020","grey","MraZ;(source:Araport11)"]
["AT1G55980","grey","FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11)"]
["AT4G26582","grey","Natural antisense transcript overlaps with AT4G26590;(source:Araport11)"]
["AT4G25770","grey","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT3G61520","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G36670","grey","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT1G16810","grey","7-dehydrocholesterol reductase-like protein;(source:Araport11)"]
["AT2G18570","grey","UDP-Glycosyltransferase superfamily protein;(source:Araport11)"]
["AT5G28330","grey","pseudogene of RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT3G13800","grey","Metallo-hydrolase/oxidoreductase superfamily protein;(source:Araport11)"]
["AT4G23760","grey","Cox19-like CHCH family protein;(source:Araport11)"]
["AT5G05060","grey","Cystatin/monellin superfamily protein;(source:Araport11)"]
["AT1G52870","grey","Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein;(source:Araport11)"]
["AT4G24715","grey","high-affinity nitrate transporter-like protein;(source:Araport11)"]
["AT4G13220","grey","transmembrane protein;(source:Araport11)"]
["AT5G64480","grey","hypothetical protein;(source:Araport11)"]
["AT4G33780","grey","ATP phosphoribosyltransferase regulatory subunit;(source:Araport11)"]
["AT1G01440","grey","hypothetical protein (DUF3133);(source:Araport11)"]
["AT4G03100","grey","Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein;(source:Araport11)"]
["AT1G17270","grey","O-fucosyltransferase family protein;(source:Araport11)"]
["AT5G48370","grey","Thioesterase/thiol ester dehydrase-isomerase superfamily protein;(source:Araport11)"]
["AT2G38370","grey","weak chloroplast movement under blue light protein (DUF827);(source:Araport11)"]
["AT5G51620","grey","Uncharacterized protein family (UPF0172);(source:Araport11)"]
["AT1G21260","grey","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 2.4e-23 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea);(source:TAIR10)"]
["AT1G15860","grey","defective in cullin neddylation protein (DUF298);(source:Araport11)"]
["AT3G22440","grey","FRIGIDA-like protein;(source:Araport11)"]
["AT4G16510","grey","YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein;(source:Araport11)"]
["AT5G11260","grey","Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene Primes promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression."]
["AT5G67170","grey","SEC-C motif-containing protein / OTU-like cysteine protease family protein;(source:Araport11)"]
["AT5G55050","grey","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates. The mRNA is cell-to-cell mobile."]
["AT4G30993","grey","Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11)"]
["AT4G37420","grey","glycosyltransferase family protein (DUF23);(source:Araport11)"]
["AT4G06744","grey","Leucine-rich repeat (LRR) family protein;(source:Araport11)"]
["AT4G02040","grey","hypothetical protein;(source:Araport11)"]
["AT1G62840","grey","ankyrin repeat/KH domain protein (DUF1442);(source:Araport11)"]
["AT1G04570","grey","Similar to plastid solute transporters."]
["AT5G27660","grey","Encodes a protein with similarity to human PARK13, a mitochondrial protease implicated in Parkinson disease. DEG14 is induced by heat stress and involved in degradation of misfolded proteins."]
["AT4G32920","grey","glycine-rich protein;(source:Araport11)"]
["AT1G77280","grey","kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)"]
["AT3G26480","grey","Transducin family protein / WD-40 repeat family protein;(source:Araport11)"]
["AT2G13665","grey","Natural antisense transcript overlaps with AT2G13660;(source:Araport11)"]
["AT3G61200","grey","Thioesterase superfamily protein;(source:Araport11)"]
["AT1G79160","grey","filamentous hemagglutinin transporter;(source:Araport11)"]
["AT5G56020","grey","Got1/Sft2-like vescicle transport protein family;(source:Araport11)"]
["AT3G01360","grey","plant viral-response family protein (DUF716);(source:Araport11)"]
["AT3G60110","grey","DNA-binding bromodomain-containing protein;(source:Araport11)"]
["AT5G15750","grey","Alpha-L RNA-binding motif/Ribosomal protein S4 family protein;(source:Araport11)"]
["AT3G12940","grey","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT1G05090","grey","dentin sialophosphoprotein-like protein;(source:Araport11)"]
["AT1G79740","grey","hAT transposon superfamily;(source:Araport11)"]
["AT4G36850","grey","PQ-loop repeat family protein / transmembrane family protein;(source:Araport11)"]
["AT3G14430","grey","GRIP/coiled-coil protein;(source:Araport11)"]
["AT4G03000","grey","RING/U-box superfamily protein;(source:Araport11)"]
["AT5G61990","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G53170","grey","LOW protein: PPR containing protein;(source:Araport11)"]
["AT3G10970","grey","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)"]
["AT5G03970","grey","F-box associated ubiquitination effector family protein;(source:Araport11)"]
["AT2G06000","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G44780","grey","translation initiation factor;(source:Araport11)"]
["AT1G63730","grey","Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11)"]
["AT4G03020","grey","transducin family protein / WD-40 repeat family protein;(source:Araport11)"]
["AT5G54090","grey","DNA mismatch repair protein MutS, type 2;(source:Araport11)"]
["AT5G18470","grey","Curculin-like (mannose-binding) lectin family protein;(source:Araport11)"]
["AT3G29330","grey","zinc finger RNA-binding-like protein;(source:Araport11)"]
["AT3G27420","grey","bromodomain testis-specific protein;(source:Araport11)"]
["AT5G43190","grey","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT1G21670","grey","DPP6 amino-terminal domain protein;(source:Araport11)"]
["AT2G27730","grey","Encodes the p2 protein, one of the subunits of mETC complex-I; associates with HRM1."]
["AT5G20670","grey","DUF1677 family protein (DUF1677);(source:Araport11)"]
["AT5G63000","grey","Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein;(source:Araport11)"]
["AT2G40240","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G33845","grey","Nucleic acid-binding, OB-fold-like protein;(source:Araport11)"]
["AT3G16030","grey","lectin protein kinase family protein;(source:Araport11)"]
["AT3G22520","grey","spindle assembly abnormal protein;(source:Araport11)"]
["AT1G67105","grey","other_RNA;(source:Araport11)"]
["AT1G13940","grey","T-box transcription factor, putative (DUF863);(source:Araport11)"]
["AT3G10740","grey","Encodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 51 of glycoside hydrolases. It may be involved in cell wall modification."]
["AT5G03210","grey","Encodes a small polypeptide contributing to resistance to potyvirus."]
["AT4G15840","grey","BTB/POZ domain-containing protein;(source:Araport11)"]
["AT3G52670","grey","FBD;(source:Araport11)"]
["AT2G44970","grey","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT5G49060","grey","DnaJ heat shock amino-terminal domain protein (DUF1977);(source:Araport11)"]
["AT1G36070","grey","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT4G09490","grey","Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11)"]
["AT1G47820","grey","hypothetical protein;(source:Araport11)"]
["AT5G53940","grey","Yippee family putative zinc-binding protein;(source:Araport11)"]
["AT5G16110","grey","hypothetical protein;(source:Araport11)"]
["AT3G28370","grey","spindle assembly checkpoint component;(source:Araport11)"]
["AT4G27900","grey","CCT motif family protein;(source:Araport11)"]
["AT3G61320","grey","Encodes a bestrophin-like protein (Best1). Located in the stroma thylakoid membrane. Functions as a chloride ion channel. Proposed to modulate proton motive force partitioning by mediating chloride ion influx in the thylakoid lumen. Major isoform (based on transcript analysis), redundant function with AtBest2."]
["AT1G19000","grey","Homeodomain-like superfamily protein;(source:Araport11)"]
["AT5G20165","grey","kish-A-like protein;(source:Araport11)"]
["AT3G54970","grey","D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein;(source:Araport11)"]
["AT1G68140","grey","zinc finger/BTB domain protein, putative (DUF1644);(source:Araport11)"]
["AT5G22120","grey","coiled-coil protein;(source:Araport11)"]
["AT1G04840","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G46670","grey","CCT motif family protein;(source:Araport11)"]
["AT4G37380","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G19530","grey","transmembrane protein;(source:Araport11)"]
["AT1G04910","grey","O-fucosyltransferase family protein;(source:Araport11)"]
["AT1G03560","grey","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)"]
["AT5G26010","grey","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT3G19660","grey","hypothetical protein;(source:Araport11)"]
["AT5G23575","grey","Transmembrane CLPTM1 family protein;(source:Araport11)"]
["AT1G05410","grey","CDPK adapter, putative (DUF1423);(source:Araport11)"]
["AT1G56690","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G37680","grey","glucose-induced degradation-like protein;(source:Araport11)"]
["AT1G66500","grey","Pre-mRNA cleavage complex II;(source:Araport11)"]
["AT3G21100","grey","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT5G11150","grey","Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family. Interacts with HOPS and RAB7; likely mediates homotypic vacuolar fusion."]
["AT5G18850","grey","Low-density receptor-like protein;(source:Araport11)"]
["AT4G37020","grey","initiation factor 4A-like protein;(source:Araport11)"]
["AT5G22020","grey","Calcium-dependent phosphotriesterase superfamily protein;(source:Araport11)"]
["AT4G39140","grey","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G11320","grey","GDSL esterase/lipase;(source:Araport11)"]
["AT2G32235","grey","hypothetical protein;(source:Araport11)"]
["AT5G65380","grey","MATE efflux family protein;(source:Araport11)"]
["AT1G70350","grey","hypothetical protein;(source:Araport11)"]
["AT5G65520","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G74580","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G38660","grey","Amino acid dehydrogenase family protein;(source:Araport11)"]
["AT1G65560","grey","Zinc-binding dehydrogenase family protein;(source:Araport11)"]
["AT2G41960","grey","hypothetical protein;(source:Araport11)"]
["AT5G14770","grey","PPR repeat protein;(source:Araport11)"]
["AT4G01990","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G48960","grey","Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)"]
["AT4G17310","grey","hypothetical protein;(source:Araport11)"]
["AT1G20691","grey","Natural antisense transcript overlaps with AT1G20690;(source:Araport11)"]
["AT1G12730","grey","GPI transamidase subunit PIG-U;(source:Araport11)"]
["AT5G27395","grey","Mitochondrial inner membrane translocase complex, subunit Tim44-related protein;(source:Araport11)"]
["AT5G10700","grey","Peptidyl-tRNA hydrolase II (PTH2) family protein;(source:Araport11)"]
["AT1G80980","grey","stress response NST1-like protein;(source:Araport11)"]
["AT5G24155","grey","FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11)"]
["AT3G54460","grey","SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein;(source:Araport11)"]
["AT4G25620","grey","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT2G32795","grey","other_RNA;(source:Araport11)"]
["AT3G19200","grey","hypothetical protein;(source:Araport11)"]
["AT2G45590","grey","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G19240","grey","transmembrane protein;(source:Araport11)"]
["AT3G17110","grey","Probably not a pseudogene based on evidence for transcription (RNA-seq) and translation (Ribo-seq) described in PMID:27791167"]
["AT1G05840","grey","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT5G66450","grey","Encodes a phosphatidic acid phosphatase that can be detected in chloroplast membrane fractions. This gene (LPPepsilon2) and LPPepsilon1, appear to be less important for diacylglycerol formation in the plastids than LPPgamma."]
["AT1G06143","grey","basic helix loop helix DNA-binding superfamily protein;(source:Araport11)"]
["AT1G09867","grey","None;(source:Araport11)"]
["AT1G09863","grey","Natural antisense transcript overlaps with AT1G79510;(source:Araport11)"]
["AT3G04950","grey","SEC-C motif protein;(source:Araport11)"]
["AT1G01210","grey","DNA-directed RNA polymerase, subunit M, archaeal;(source:Araport11)"]
["AT4G13918","grey","Natural antisense transcript overlaps with AT4G13920;(source:Araport11)"]
["AT2G07733","grey","pseudogene of NADH dehydrogenase 2B;(source:Araport11)"]
["AT1G08220","grey","ATPase complex subunit;(source:Araport11)"]
["AT1G17255","grey","Natural antisense transcript overlaps with AT1G17250;(source:Araport11)"]
["AT3G18300","grey","hypothetical protein;(source:Araport11)"]
["AT4G14720","grey","PPD2 (and its paralog, PPD1) encode plant-specific putative DNA-binding proteins. Deletion of the PPD locus increases leaf lamina size and results in dome-shaped rather than flat leaves. Siliques are also altered in shape because of extra lamina growth."]
["AT5G57410","grey","Encodes a microtubule-associated protein."]
["AT3G03240","grey","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT3G02070","grey","Cysteine proteinases superfamily protein;(source:Araport11)"]
["AT5G39900","grey","Small GTP-binding protein;(source:Araport11)"]
["AT3G20890","grey","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT3G09160","grey","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT5G28220","grey","Protein prenylyltransferase superfamily protein;(source:Araport11)"]
["AT1G31840","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G08580","grey","hypothetical protein;(source:Araport11)"]
["AT5G44040","grey","eisosome SEG2-like protein;(source:Araport11)"]
["AT4G10420","grey","FBD / Leucine Rich Repeat domains containing protein;(source:Araport11)"]
["AT3G12970","grey","serine/arginine repetitive matrix-like protein;(source:Araport11)"]
["AT4G17615","grey","Member of AtCBL (Calcineurin B-like Calcium Sensor Proteins) family. Protein level is increased upon high salt, mannitol, and cold stresses. CBL1 interacts with CIPK23 and recruits the kinase to the plasma membrane where the substrate(s) of CIPK23 may reside. CBL1 localization is regulated by protein modification including myristolation and acylation."]
["AT4G27790","grey","Calcium-binding EF hand family protein;(source:Araport11)"]
["AT1G16930","grey","F-box/RNI-like/FBD-like domains-containing protein;(source:Araport11)"]
["AT5G61940","grey","Ubiquitin carboxyl-terminal hydrolase-related protein;(source:Araport11)"]
["AT2G03020","grey","Heat shock protein HSP20/alpha crystallin family;(source:Araport11)"]
["AT5G47455","grey","hypothetical protein;(source:Araport11)"]
["AT5G59050","grey","G patch domain protein;(source:Araport11)"]
["AT2G31141","grey","Encodes a potential nitrate responsive gene."]
["AT1G66070","grey","Translation initiation factor eIF3 subunit;(source:Araport11)"]
["AT4G01895","grey","systemic acquired resistance (SAR) regulator protein NIMIN-1-like protein;(source:Araport11)"]
["AT4G19060","grey","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT1G20550","grey","O-fucosyltransferase family protein;(source:Araport11)"]
["AT3G19330","grey","transmembrane protein, putative (DUF677);(source:Araport11)"]
["AT5G08200","grey","peptidoglycan-binding LysM domain-containing protein;(source:Araport11)"]
["AT1G15170","grey","MATE efflux family protein;(source:Araport11)"]
["AT1G15790","grey","mediator of RNA polymerase II transcription subunit 15a-like protein;(source:Araport11)"]
["AT3G05340","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT4G38545","grey","Natural antisense transcript overlaps with AT4G38530 and AT4G38540;(source:Araport11)"]
["AT2G05914","grey","Potential natural antisense gene, locus overlaps with AT2G05915"]
["AT1G61640","grey","Protein kinase superfamily protein;(source:Araport11)"]
["AT5G40405","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G40400","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G23100","grey","GroES-like family protein;(source:Araport11)"]
["AT1G13910","grey","Leucine-rich repeat (LRR) family protein;(source:Araport11)"]
["AT1G74630","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G52710","grey","Rubredoxin-like superfamily protein;(source:Araport11)"]
["AT1G05333","grey","Natural antisense transcript overlaps with AT1G17810;(source:Araport11)"]
["AT3G59150","grey","F-box/RNI superfamily protein;(source:Araport11)"]
["AT4G39925","grey","AT hook motif DNA-binding family protein;(source:Araport11)"]
["AT5G30495","grey","Fcf2 pre-rRNA processing protein;(source:Araport11)"]
["AT2G07671","grey","ATP synthase subunit C family protein;(source:Araport11)"]
["AT3G62140","grey","NEFA-interacting nuclear protein;(source:Araport11)"]
["AT1G08507","grey","None;(source:Araport11)"]
["AT5G46100","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G66760","grey","MATE efflux family protein;(source:Araport11)"]
["AT5G25280","grey","serine-rich protein-like protein;(source:Araport11)"]
["AT5G01780","grey","2-oxoglutarate-dependent dioxygenase family protein;(source:Araport11)"]
["AT4G19140","grey","exopolysaccharide production negative regulator;(source:Araport11)"]
["AT4G13330","grey","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT4G21170","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G49350","grey","Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11)"]
["AT1G07128","grey","Natural antisense transcript overlaps with AT1G07130;(source:Araport11)"]
["AT4G20340","grey","Transcription factor TFIIE, alpha subunit;(source:Araport11)"]
["AT3G52070","grey","RNA/RNP complex-1-interacting phosphatase;(source:Araport11)"]
["AT5G04905","grey","Natural antisense transcript overlaps with AT5G28919;(source:Araport11)"]
["AT3G17770","grey","Dihydroxyacetone kinase;(source:Araport11)"]
["AT3G48240","grey","Octicosapeptide/Phox/Bem1p family protein;(source:Araport11)"]
["AT3G51750","grey","hypothetical protein;(source:Araport11)"]
["AT3G49800","grey","BSD domain-containing protein;(source:Araport11)"]
["AT3G41768","grey","rRNA;(source:Araport11)"]
["AT5G66480","grey","bacteriophage N4 adsorption B protein;(source:Araport11)"]
["AT5G64880","grey","transmembrane protein;(source:Araport11)"]
["AT5G65860","grey","ankyrin repeat family protein;(source:Araport11)"]
["AT5G45190","grey","Encodes a cyclin T partner CYCT1;5. Plays important roles in infection with Cauliflower mosaic virus (CaMV)."]
["AT1G66330","grey","senescence-associated family protein;(source:Araport11)"]
["AT1G32583","grey","A microRNA MIR400 is derived from the first intron of At1g32583 in the 5'UTR. A stress-induced alternative splicing event in At1g32583 resulted in greater accumulation of miR400 primary transcripts and a low level of mature miR400."]
["AT3G62470","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G03960","grey","Calcium-binding EF hand family protein;(source:Araport11)"]
["AT3G07860","grey","Ubiquitin-like superfamily protein;(source:Araport11)"]
["AT5G17010","grey","Major facilitator superfamily protein;(source:Araport11)"]
["AT5G53990","grey","UDP-Glycosyltransferase superfamily protein;(source:Araport11)"]
["AT2G05812","grey","Natural antisense transcript overlaps with AT2G05810;(source:Araport11)"]
["AT5G04550","grey","type-1 restriction enzyme mjaxp r protein (DUF668);(source:Araport11)"]
["AT4G10130","grey","DNAJ heat shock N-terminal domain-containing protein;(source:Araport11)"]
["AT1G67856","grey","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G51430","grey","cTAGE family protein;(source:Araport11)"]
["AT1G13390","grey","translocase subunit seca;(source:Araport11)"]
["AT1G11410","grey","S-locus lectin protein kinase family protein;(source:Araport11)"]
["AT4G10890","grey","DDE family endonuclease;(source:Araport11)"]
["AT5G05250","grey","hypothetical protein;(source:Araport11)"]
["AT4G25610","grey","C2H2-like zinc finger protein;(source:Araport11)"]
["AT1G52342","grey","hypothetical protein;(source:Araport11)"]
["AT3G03170","grey","hypothetical protein;(source:Araport11)"]
["AT3G60590","grey","cytochrome P450 family protein;(source:Araport11)"]
["AT1G71528","grey","Natural antisense transcript overlaps with AT1G71530;(source:Araport11)"]
["AT4G39300","grey","envelope glycoprotein;(source:Araport11)"]
["AT1G21060","grey","Serine/Threonine-kinase, putative (Protein of unknown function, DUF547);(source:Araport11)"]
["AT5G16950","grey","krueppel-like factor;(source:Araport11)"]
["AT3G23330","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT4G31830","grey","transmembrane protein;(source:Araport11)"]
["AT2G17830","grey","F-box and associated interaction domains-containing protein;(source:Araport11)"]
["AT4G27852","grey","Natural antisense transcript overlaps with AT4G27850 and AT4G27860;(source:Araport11)"]
["AT1G35115","grey","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 1.1e-168 P-value blast match to gb|AAO73527.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family);(source:TAIR10)"]
["AT3G49410","grey","Transcription factor IIIC, subunit 5;(source:Araport11)"]
["AT3G54680","grey","proteophosphoglycan-like protein;(source:Araport11)"]
["AT1G24210","grey","Paired amphipathic helix (PAH2) superfamily protein;(source:Araport11)"]
["AT1G28650","grey","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates."]
["AT5G11700","grey","ephrin type-B receptor;(source:Araport11)"]
["AT5G01950","grey","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT1G80170","grey","Pectin lyase-like superfamily protein;(source:Araport11)"]
["AT3G52680","grey","F-box/RNI-like/FBD-like domains-containing protein;(source:Araport11)"]
["AT5G22545","grey","hypothetical protein;(source:Araport11)"]
["AT5G05040","grey","Cystatin/monellin superfamily protein;(source:Araport11)"]
["AT3G15080","grey","Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11)"]
["AT5G58200","grey","Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11)"]
["AT3G43690","grey","transposable_element_gene;(source:Araport11);copia-like retrotransposon family protein, has a 1.4e-29 P-value blast match to gb|AAG52950.1| putative envelope protein (Endovir1-1) (Arabidopsis thaliana) (Ty1_Copia-family);(source:TAIR10)"]
["AT2G46560","grey","transducin family protein / WD-40 repeat family protein;(source:Araport11)"]
["AT2G36240","grey","pentatricopeptide (PPR) repeat-containing protein;(source:Araport11)"]
["AT5G20220","grey","zinc knuckle (CCHC-type) family protein;(source:Araport11)"]
["AT5G59610","grey","Chaperone DnaJ-domain superfamily protein;(source:Araport11)"]
["AT1G22800","grey","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT3G52800","grey","A20/AN1-like zinc finger family protein;(source:Araport11)"]
["AT1G35516","grey","myb-like transcription factor family protein;(source:Araport11)"]
["AT1G52450","grey","Ubiquitin carboxyl-terminal hydrolase-related protein;(source:Araport11)"]
["AT1G05780","grey","Vacuolar ATPase assembly integral membrane protein VMA21-like domain-containing protein;(source:Araport11)"]
["AT1G53460","grey","craniofacial development protein;(source:Araport11)"]
["AT5G10695","grey","methionyl-tRNA synthetase;(source:Araport11)"]
["AT1G04780","grey","Ankyrin repeat family protein;(source:Araport11)"]
["AT1G15800","grey","hypothetical protein;(source:Araport11)"]
["AT2G33490","grey","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT4G36840","grey","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT1G44890","grey","inner membrane OXA1-like protein;(source:Araport11)"]
["AT1G48870","grey","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT4G02920","grey","hypothetical protein;(source:Araport11)"]
["AT4G13650","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G57655","grey","xylose isomerase family protein;(source:Araport11)"]
["AT5G08270","grey","C5orf35;(source:Araport11)"]
["AT2G30930","grey","hypothetical protein;(source:Araport11)"]
["AT1G56660","grey","MAEBL domain protein;(source:Araport11)"]
["AT3G51090","grey","coiled-coil 90B-like protein (DUF1640);(source:Araport11)"]
["AT1G80720","grey","Mitochondrial glycoprotein family protein;(source:Araport11)"]
["AT3G05070","grey","Cwf18 pre-mRNA splicing factor;(source:Araport11)"]
["AT1G73490","grey","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT1G31310","grey","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT3G05675","grey","BTB/POZ domain-containing protein;(source:Araport11)"]
["AT4G17270","grey","Putative MO25-like protein; commonly-enriched candidate LPS-interacting PM-associated proteins from the three affinity chromatography systems with LPS chemotype Xcc 8530 as ligand."]
["AT1G24610","grey","Rubisco methyltransferase family protein;(source:Araport11)"]
["AT1G06010","grey","basic leucine zipper/W2 domain protein;(source:Araport11)"]
["AT1G79120","grey","Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11)"]
["AT4G30570","grey","Glucose-1-phosphate adenylyltransferase family protein;(source:Araport11)"]
["AT3G07215","grey","other_RNA;(source:Araport11)"]
["AT1G16790","grey","ribosomal protein-like protein;(source:Araport11)"]
["AT3G60286","grey","This gene encodes a small protein and has either evidence of transcription or purifying selection."]
["AT1G64140","grey","WRKY transcription factor;(source:Araport11)"]
["AT3G52760","grey","Integral membrane Yip1 family protein;(source:Araport11)"]
["AT3G61420","grey","BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins);(source:Araport11)"]
["AT2G01422","grey","other_RNA;(source:Araport11)"]
["AT2G23370","grey","cyclin delta-3;(source:Araport11)"]
["AT3G26085","grey","CAAX amino terminal protease family protein;(source:Araport11)"]
["AT5G22620","grey","encodes a putative 2-carboxy-D-arabinitol 1-phosphate phosphatase"]
["AT5G65613","grey","hypothetical protein;(source:Araport11)"]
["AT4G21140","grey","copper ion-binding protein;(source:Araport11)"]
["AT3G12510","grey","MADS-box family protein;(source:Araport11)"]
["AT3G02555","grey","hypothetical protein;(source:Araport11)"]
["AT5G09580","grey","heat shock protein;(source:Araport11)"]
["AT3G48070","grey","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G68872","grey","Unknown gene"]
["AT5G53650","grey","ABC transporter A family protein;(source:Araport11)"]
["AT1G21651","grey","zinc ion binding protein;(source:Araport11)"]
["AT5G16360","grey","NC domain-containing protein-like protein;(source:Araport11)"]
["AT3G52040","grey","2,3-bisphosphoglycerate-dependent phosphoglycerate mutase;(source:Araport11)"]
["AT3G26510","grey","Octicosapeptide/Phox/Bem1p family protein;(source:Araport11)"]
["AT3G62540","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G14490","grey","Putative AT-hook DNA-binding family protein;(source:Araport11)"]
["AT4G22760","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G09740","grey","Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)"]
["AT5G66052","grey","transmembrane protein;(source:Araport11)"]
["AT2G41600","grey","Mitochondrial glycoprotein family protein;(source:Araport11)"]
["AT3G60410","grey","hypothetical protein (DUF1639);(source:Araport11)"]
["AT1G24530","grey","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT5G06350","grey","ARM repeat superfamily protein;(source:Araport11)"]
["AT1G26580","grey","ELM2 domain protein;(source:Araport11)"]
["AT1G05810","grey","Rab GTPase-like A5A protein;(source:Araport11)"]
["AT1G61150","grey","LisH and RanBPM domains containing protein;(source:Araport11)"]
["AT5G05090","grey","Homeodomain-like superfamily protein;(source:Araport11)"]
["AT1G75295","grey","Natural antisense transcript overlaps with AT1G75290 and AT1G75300;(source:Araport11)"]
["AT2G04852","grey","Potential natural antisense gene, locus overlaps with AT2G04850"]
["AT3G01520","grey","Encodes a universal stress protein (USP)-like protein that has been crystallized in complex with AMP, suggesting that it belongs to the ATP-binding USP subfamily. The mRNA is cell-to-cell mobile."]
["AT2G31725","grey","FAM136A-like protein (DUF842);(source:Araport11)"]
["AT3G07160","grey","Encodes GSL10, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL10 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. GSL10 mutation leads to perturbation of microspore division symmetry, irregular callose deposition and failure of generative cell engulfment by the vegetative cell cytoplasm. Also refer to GSL8 (At2g36850)."]
["AT2G41470","grey","agamous-like MADS-box protein;(source:Araport11)"]
["AT3G07290","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G48390","grey","RNI-like superfamily protein;(source:Araport11)"]
["AT3G60200","grey","hypothetical protein;(source:Araport11)"]
["AT1G14600","grey","Homeodomain-like superfamily protein;(source:Araport11)"]
["AT1G61420","grey","S-locus lectin protein kinase family protein;(source:Araport11)"]
["AT5G02065","grey","transmembrane protein;(source:Araport11)"]
["AT1G76600","grey","PADRE protein up-regulated after infection by S. sclerotiorun."]
["AT1G15215","grey","Encodes SHH1, a homeodomain protein required for DNA methylation. It is an atypical RNA-directed DNA methylation component, and functions in transcriptional silencing through both DNA methylation-dependent and -independent pathways."]
["AT1G57540","grey","40S ribosomal protein;(source:Araport11)"]
["AT3G54910","grey","RNI-like superfamily protein;(source:Araport11)"]
["AT2G35140","grey","DCD (Development and Cell Death) domain protein;(source:Araport11)"]
["AT1G65820","grey","microsomal glutathione s-transferase;(source:Araport11)"]
["AT5G14220","grey","Encodes PPO2, a putative protoporphyrinogen oxidase based on sequence homology. Also known as MEE61 (maternal effect embryo arrest 61). mee61 mutant shows arrested endosperm development."]
["AT3G02690","grey","Nucleotide/sugar transporter family protein"]
["AT3G60070","grey","Major facilitator superfamily protein;(source:Araport11)"]
["AT5G08180","grey","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11)"]
["AT5G43620","grey","Pre-mRNA cleavage complex II;(source:Araport11)"]
["AT5G40540","grey","Protein kinase superfamily protein;(source:Araport11)"]
["AT5G62840","grey","Phosphoglycerate mutase family protein;(source:Araport11)"]
["AT3G52360","grey","transmembrane protein;(source:Araport11)"]
["AT1G15405","grey","other_RNA;(source:Araport11)"]
["AT1G32928","grey","Avr9/Cf-9 rapidly elicited protein;(source:Araport11)"]
["AT1G30190","grey","cotton fiber protein;(source:Araport11)"]
["AT5G15340","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G60910","grey","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT1G16800","grey","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT5G28320","grey","embryo defective protein;(source:Araport11)"]
["AT4G10690","grey","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 1.5e-256 P-value blast match to dbj|BAA78426.1| polyprotein (AtRE2-1) (Arabidopsis thaliana) (Ty1_Copia-element);(source:TAIR10)"]
["AT2G45920","grey","U-box domain-containing protein;(source:Araport11)"]
["AT5G63100","grey","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT4G20720","grey","dentin sialophosphoprotein-like protein;(source:Araport11)"]
["AT3G26630","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G75945","grey","hypothetical protein;(source:Araport11)"]
["AT5G09175","grey","Natural antisense transcript overlaps with AT5G64000;(source:Araport11)"]
["AT4G35130","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT4G11630","grey","Ribosomal protein L19 family protein;(source:Araport11)"]
["AT3G11420","grey","beta-1,3-N-acetylglucosaminyltransferase lunatic protein, putative (DUF604);(source:Araport11)"]
["AT3G03230","grey","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT1G50730","grey","hypothetical protein;(source:Araport11)"]
["AT3G49650","grey","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT1G61740","grey","Sulfite exporter TauE/SafE family protein;(source:Araport11)"]
["AT1G55150","grey","DEA(D/H)-box RNA helicase family protein;(source:Araport11)"]
["AT4G14900","grey","FRIGIDA-like protein;(source:Araport11)"]
["AT4G29990","grey","Leucine-rich repeat transmembrane protein kinase protein;(source:Araport11)"]
["AT4G33960","grey","hypothetical protein;(source:Araport11)"]
["AT5G54860","grey","Major facilitator superfamily protein;(source:Araport11)"]
["AT2G44525","grey","NADH dehydrogenase ubiquinone 1 alpha subcomplex assembly factor-like protein (DUF498/DUF598);(source:Araport11)"]
["AT1G48430","grey","Dihydroxyacetone kinase;(source:Araport11)"]
["AT1G49520","grey","SWIB complex BAF60b domain-containing protein;(source:Araport11)"]
["AT2G27610","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G12280","grey","SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein;(source:Araport11)"]
["AT1G61500","grey","S-locus lectin protein kinase family protein;(source:Araport11)"]
["AT5G01210","grey","HXXXD-type acyl-transferase family protein;(source:Araport11)"]
["AT5G57100","grey","Nucleotide/sugar transporter family protein;(source:Araport11)"]
["AT5G22460","grey","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT3G16220","grey","Putative eukaryotic LigT;(source:Araport11)"]
["AT5G50550","grey","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT1G77290","grey","Glutathione S-transferase family protein;(source:Araport11)"]
["AT1G65120","grey","Ubiquitin carboxyl-terminal hydrolase-related protein;(source:Araport11)"]
["AT2G27330","grey","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT3G02710","grey","Encodes a protein with a putative role in mRNA splicing."]
["AT4G10930","grey","RING/U-box protein;(source:Araport11)"]
["AT1G10590","grey","Nucleic acid-binding, OB-fold-like protein;(source:Araport11)"]
["AT4G36420","grey","Ribosomal protein L12 family protein;(source:Araport11)"]
["AT5G50840","grey","alpha-taxilin-like protein;(source:Araport11)"]
["AT5G44170","grey","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT3G56460","grey","GroES-like zinc-binding alcohol dehydrogenase family protein;(source:Araport11)"]
["AT5G15260","grey","ribosomal protein L34e superfamily protein;(source:Araport11)"]
["AT1G27410","grey","DNA repair metallo-beta-lactamase family protein;(source:Araport11)"]
["AT3G07260","grey","SMAD/FHA domain-containing protein;(source:Araport11)"]
["AT2G03330","grey","transmembrane protein;(source:Araport11)"]
["AT2G43110","grey","U3 containing 90S pre-ribosomal complex subunit;(source:Araport11)"]
["AT5G16210","grey","HEAT repeat-containing protein;(source:Araport11)"]
["AT1G45248","grey","Nucleolar histone methyltransferase-related protein;(source:Araport11)"]
["AT2G23300","grey","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT1G02705","grey","hypothetical protein;(source:Araport11)"]
["AT3G54160","grey","RNI-like superfamily protein;(source:Araport11)"]
["AT1G05087","grey","dentin sialophosphoprotein;(source:Araport11)"]
["AT3G01170","grey","Ribosomal protein L34e superfamily protein;(source:Araport11)"]
["AT5G07400","grey","forkhead-associated domain-containing protein / FHA domain-containing protein;(source:Araport11)"]
["AT4G01870","grey","tolB protein-like protein;(source:Araport11)"]
["AT5G20190","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G50650","grey","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT5G43950","grey","vacuolar protein sorting-associated protein (DUF946);(source:Araport11)"]
["AT5G16450","grey","Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase;(source:Araport11)"]
["AT5G09630","grey","LisH/CRA/RING-U-box domains-containing protein;(source:Araport11)"]
["AT5G16980","grey","Zinc-binding dehydrogenase family protein;(source:Araport11)"]
["AT2G45023","grey","other_RNA;(source:Araport11)"]
["AT2G27680","grey","Oxidoreductase located in chloroplast."]
["AT5G41940","grey","Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11)"]
["AT3G24030","grey","hydroxyethylthiazole kinase family protein;(source:Araport11)"]
["AT1G17410","grey","Nucleoside diphosphate kinase family protein;(source:Araport11)"]
["AT5G40500","grey","hypothetical protein;(source:Araport11)"]
["AT2G21180","grey","transmembrane protein;(source:Araport11)"]
["AT3G25070","grey","Encodes a member of the R protein complex and may represent a virulence target of type III pili effector proteins (virulence factors) from bacterial pathogens, which is Primeguarded Prime by R protein complex (RPM1 and RPS2 proteins). RIN4 physically interacts with RPS2 and RPM1 in vivo. Bacterial avirulence (Avr) effectors AvrB, AvrRpm1, and AvrRpt2 induce a mobility shift in RIN4 and expression of AvrRpt2 induces rapid degradation of RIN4. RIN4 contains 2 sites for AvrRpt2 autocleavage, called RCS1 and RCS2. Overexpression of RIN4 inhibits multiple phenotypes associated with AvrRpt2 function and also inhibits PAMP-induced defense signaling. Attached to the plasma membrane at its carboxyl terminus. Cleaved by AvrRpt2 at two PxFGxW motifs, one releasing a large portion of RIN4 from the plasma membrane and both exposing amino-terminal residues that destabilized the carboxyl-terminal cleavage products by targeting them for N-end ubiquitylation and proteasomal degradation. Major virulence target of the TTSE HopF2Pto.The mRNA is cell-to-cell mobile."]
["AT1G50810","grey","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 4.6e-216 P-value blast match to gb|AAO73527.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family);(source:TAIR10)"]
["AT2G35736","grey","hypothetical protein;(source:Araport11)"]
["AT3G01450","grey","ARM repeat superfamily protein;(source:Araport11)"]
["AT5G54940","grey","Translation initiation factor SUI1 family protein;(source:Araport11)"]
["AT1G55000","grey","peptidoglycan-binding LysM domain-containing protein;(source:Araport11)"]
["AT2G22080","grey","transmembrane protein;(source:Araport11)"]
["AT5G27280","grey","Zim17-type zinc finger protein;(source:Araport11)"]
["AT1G54730","grey","Major facilitator superfamily protein;(source:Araport11)"]
["AT5G22210","grey","aspartyl/glutamyl-tRNA (Asn/Gln) amidotransferase subunit B;(source:Araport11)"]
["AT1G09920","grey","TRAF-type zinc finger-like protein;(source:Araport11)"]
["AT4G01030","grey","pentatricopeptide (PPR) repeat-containing protein;(source:Araport11)"]
["AT3G59910","grey","Ankyrin repeat family protein;(source:Araport11)"]
["AT5G52850","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G38580","grey","Mitochondrial ATP synthase D chain-related protein;(source:Araport11)"]
["AT4G06599","grey","ubiquitin family protein;(source:Araport11)"]
["AT1G33350","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G17410","grey","Spc97 / Spc98 family of spindle pole body (SBP) component;(source:Araport11)"]
["AT3G05280","grey","Integral membrane Yip1 family protein;(source:Araport11)"]
["AT3G03870","grey","transmembrane protein;(source:Araport11)"]
["AT5G20110","grey","Dynein light chain type 1 family protein;(source:Araport11)"]
["AT1G71060","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G02390","grey","hypothetical protein;(source:Araport11)"]
["AT1G22040","grey","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT4G18975","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G46192","grey","other_RNA;(source:Araport11)"]
["AT4G38010","grey","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)"]
["AT1G64320","grey","myosin heavy chain-like protein;(source:Araport11)"]
["AT4G35530","grey","phosphatidylinositolglycan-like protein;(source:Araport11)"]
["AT4G25210","grey","DNA-binding storekeeper protein-related transcriptional regulator;(source:Araport11)"]
["AT5G05965","grey","cell wall RBR3-like protein;(source:Araport11)"]
["AT1G58848","grey","Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11)"]
["AT3G18215","grey","transmembrane protein, putative (Protein of unknown function, DUF599);(source:Araport11)"]
["AT5G56160","grey","Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11)"]
["AT3G17890","grey","hypothetical protein;(source:Araport11)"]
["AT3G62450","grey","DNA mismatch repair protein;(source:Araport11)"]
["AT1G73770","grey","coiled-coil protein;(source:Araport11)"]
["AT5G23540","grey","Mov34/MPN/PAD-1 family protein;(source:Araport11)"]
["AT4G06498","grey","pseudogene of vacuolar sorting receptor 4;(source:Araport11)"]
["AT1G06463","grey","None;(source:Araport11)"]
["AT3G24929","grey","hypothetical protein;(source:Araport11)"]
["AT1G34460","grey","B1 type cyclin"]
["AT3G23605","grey","Ubiquitin-like superfamily protein;(source:Araport11)"]
["AT2G18520","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G16850","grey","transmembrane protein;(source:Araport11)"]
["AT1G16320","grey","plant/protein (DUF2358);(source:Araport11)"]
["AT4G11440","grey","Mitochondrial substrate carrier family protein;(source:Araport11)"]
["AT1G70360","grey","F-box family protein;(source:Araport11)"]
["AT1G72855","grey","Natural antisense transcript overlaps with AT1G72860;(source:Araport11)"]
["AT1G72852","grey","Natural antisense transcript overlaps with AT1G72850;(source:Araport11)"]
["AT3G59330","grey","solute carrier family 35 protein (DUF914);(source:Araport11)"]
["AT3G08890","grey","hypothetical protein (Protein of unknown function, DUF538);(source:Araport11)"]
["AT5G39380","grey","Plant calmodulin-binding protein-like protein;(source:Araport11)"]
["AT2G02350","grey","encodes a protein containing an F-box domain and physically interacts with SCF subunit SKP1/ASK1. The protein also exhibits similarity in sequence to phloem protein 2 (PP2) from cucumber."]
["AT5G43820","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT4G01985","grey","hypothetical protein;(source:Araport11)"]
["AT1G52430","grey","Ubiquitin carboxyl-terminal hydrolase-related protein;(source:Araport11)"]
["AT3G14860","grey","NHL domain-containing protein;(source:Araport11)"]
["AT5G27410","grey","D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class IV (InterPro:IPR001544); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT3G05190.1). Note that the At5g27410.2 gene model (TAIR10) has been obsoleted due to the lack of experimental support."]
["AT3G02832","grey","other_RNA;(source:Araport11)"]
["AT1G61730","grey","DNA-binding storekeeper protein-related transcriptional regulator;(source:Araport11)"]
["AT2G39805","grey","Integral membrane Yip1 family protein;(source:Araport11)"]
["AT5G26731","grey","hypothetical protein;(source:Araport11)"]
["AT4G21700","grey","DUF2921 family protein, putative (DUF2921);(source:Araport11)"]
["AT5G53020","grey","Ribonuclease P protein subunit P38-like protein;(source:Araport11)"]
["AT1G23890","grey","NHL domain-containing protein;(source:Araport11)"]
["AT2G37420","grey","ATP binding microtubule motor family protein;(source:Araport11)"]
["AT2G02148","grey","PPR containing protein;(source:Araport11)"]
["AT1G16430","grey","Surfeit locus protein 5 subunit 22 of Mediator complex;(source:Araport11)"]
["AT5G62210","grey","Embryo-specific protein 3, (ATS3);(source:Araport11)"]
["AT2G25950","grey","PITH domain protein (DUF1000);(source:Araport11)"]
["AT4G11970","grey","YTH family protein;(source:Araport11)"]
["AT5G27620","grey","core cell cycle genesThe mRNA is cell-to-cell mobile."]
["AT3G18320","grey","F-box and associated interaction domains-containing protein;(source:Araport11)"]
["AT5G51630","grey","Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11)"]
["AT4G32960","grey","BRISC/BRCA1-A complex protein;(source:Araport11)"]
["AT5G45130","grey","small GTP binding protein. The mRNA is cell-to-cell mobile."]
["AT2G36630","grey","Sulfite exporter TauE/SafE family protein;(source:Araport11)"]
["AT2G07727","grey","This gene is part of a region of chromosome 2 that contains components of the mitochondrial genome and likely is non functional.The sequence corresponds to a component of the mitochondrial ubiquinol-cytochrome c oxidoreductase which functions in mitochondrial electron transport."]
["AT4G35360","grey","pantothenate kinase;(source:Araport11)"]
["AT5G38510","grey","Rhomboid-related intramembrane serine protease family protein;(source:Araport11)"]
["AT1G05562","grey","Natural antisense transcript overlaps with AT1G05560;(source:Araport11)"]
["AT1G62850","grey","Class I peptide chain release factor;(source:Araport11)"]
["AT3G20120","grey","cytochrome P450, family 705, subfamily A, polypeptide 21;(source:Araport11)"]
["AT2G46540","grey","fiber;(source:Araport11)"]
["AT4G28811","grey","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)"]
["AT1G30590","grey","RNA polymerase I specific transcription initiation factor RRN3 protein;(source:Araport11)"]
["AT1G47710","grey","Inhibitor of pro-apoptotic proteases, which is involved in the regulation of the programmed cell death induction."]
["AT5G56520","grey","hypothetical protein;(source:Araport11)"]
["AT4G17360","grey","encodes one of the two putative formyltetrahydrofolate deformylase. Located in the mitochondrion. Involved in photorespiratory tetrahydrofolate cycle."]
["AT2G43120","grey","Encodes a member of the functionally diverse cupin protein superfamily that is involved in susceptibility to the bacterial plant pathogen Ralstonia solanacearum. It stabilizes the papain-like cysteine protease XCP2.The mRNA is cell-to-cell mobile."]
["AT5G02670","grey","hypothetical protein;(source:Araport11)"]
["AT5G66810","grey","Ran-binding protein in the microtubule-organising centre protein;(source:Araport11)"]
["AT4G12070","grey","hypothetical protein;(source:Araport11)"]
["AT1G77670","grey","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11)"]
["AT5G63940","grey","kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)"]
["AT5G50990","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G55900","grey","Sucrase/ferredoxin-like family protein;(source:Araport11)"]
["AT4G30100","grey","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT4G16710","grey","glycosyltransferase family protein 28;(source:Araport11)"]
["AT1G32127","grey","plant viral-response family protein;(source:Araport11)"]
["AT1G51690","grey","55 kDa B regulatory subunit of phosphatase 2A mRNA,"]
["AT4G17440","grey","chromogranin (DUF1639);(source:Araport11)"]
["AT1G79390","grey","centrosomal protein;(source:Araport11)"]
["AT2G02750","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT4G14360","grey","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT1G51080","grey","golgin family A protein;(source:Araport11)"]
["AT3G11720","grey","Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11)"]
["AT5G24352","grey","Serine/threonine-protein kinase WNK (With No Lysine)-like protein;(source:Araport11)"]
["AT4G27620","grey","intracellular protein transporter;(source:Araport11)"]
["AT1G73920","grey","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT4G32270","grey","Ubiquitin-like superfamily protein;(source:Araport11)"]
["AT2G04340","grey","cytoplasmic dynein 2 light intermediate chain;(source:Araport11)"]
["AT2G02590","grey","small multi-drug export protein;(source:Araport11)"]
["AT5G45472","grey","Potential natural antisense gene, locus overlaps with AT5G45470"]
["AT5G07640","grey","RING/U-box superfamily protein;(source:Araport11)"]
["AT5G23330","grey","Nucleotidylyl transferase superfamily protein;(source:Araport11)"]
["AT3G46845","grey","hypothetical protein;(source:Araport11)"]
["AT1G01640","grey","Putative role in flower development. Comparison of SALK_011721C to Columbia wild type resulted in a trend toward earlier flowering in the mutant (P=0.1) (Stapleton and Woodruff 2009, personal communication)."]
["AT1G06690","grey","Oxidoreductase located in stroma lamellae and grana margins."]
["AT4G04370","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT4G32020","grey","serine/arginine repetitive matrix-like protein;(source:Araport11)"]
["AT1G17790","grey","DNA-binding bromodomain-containing protein;(source:Araport11)"]
["AT3G08840","grey","D-alanine-D-alanine ligase family;(source:Araport11)"]
["AT1G71250","grey","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates."]
["AT1G80970","grey","XH domain-containing protein;(source:Araport11)"]
["AT4G00390","grey","DNA-binding storekeeper protein-related transcriptional regulator;(source:Araport11)"]
["AT2G20710","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G29170","grey","transmembrane protein (DUF872);(source:Araport11)"]
["AT4G16330","grey","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT1G74780","grey","Nodulin-like / Major Facilitator Superfamily protein;(source:Araport11)"]
["AT2G16900","grey","phospholipase-like protein (PEARLI 4) family protein;(source:Araport11)"]
["AT4G03820","grey","transmembrane protein, putative (DUF3537);(source:Araport11)"]
["AT5G06220","grey","LETM1-like protein;(source:Araport11)"]
["AT4G33985","grey","membrane insertase, putative (DUF1685);(source:Araport11)"]
["AT5G52980","grey","ER-based factor for assembly of V-ATPase;(source:Araport11)"]
["AT2G39500","grey","hexose transporter;(source:Araport11)"]
["AT5G43400","grey","plant/protein;(source:Araport11)"]
["AT5G66631","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G07820","grey","Histone superfamily protein;(source:Araport11)"]
["AT1G11150","grey","transposable_element_gene;(source:Araport11);pseudogene, similar to putative AP endonuclease/reverse transcriptase, blastp match of 30%25 identity and 3.2e-59 P-value to GP|21952510|gb|AAM82604.1|AF525305_2|AF525305 putative AP endonuclease/reverse transcriptase {Brassica napus};(source:TAIR10)"]
["AT1G30910","grey","Molybdenum cofactor sulfurase family protein;(source:Araport11)"]
["AT2G27775","grey","PPR containing protein;(source:Araport11)"]
["AT1G03210","grey","Phenazine biosynthesis PhzC/PhzF protein;(source:Araport11)"]
["AT1G79660","grey","ephrin-A3 protein;(source:Araport11)"]
["AT3G53220","grey","Thioredoxin superfamily protein;(source:Araport11)"]
["AT1G01840","grey","AP2-like ethylene-responsive transcription factor SNZ;(source:Araport11)"]
["AT3G08000","grey","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT3G33530","grey","Transducin family protein / WD-40 repeat family protein;(source:Araport11)"]
["AT5G13400","grey","Major facilitator superfamily protein;(source:Araport11)"]
["AT1G61890","grey","MATE efflux family protein;(source:Araport11)"]
["AT3G53270","grey","Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein;(source:Araport11)"]
["AT1G21770","grey","Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11)"]
["AT4G26800","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G66960","grey","Prolyl oligopeptidase family protein;(source:Araport11)"]
["AT2G26860","grey","FBD, F-box and Leucine Rich Repeat domains containing protein;(source:Araport11)"]
["AT1G67300","grey","Major facilitator superfamily protein;(source:Araport11)"]
["AT1G45160","grey","Protein kinase superfamily protein;(source:Araport11)"]
["AT4G06676","grey","etoposide-induced protein;(source:Araport11)"]
["AT2G39910","grey","ARM repeat superfamily protein;(source:Araport11)"]
["AT2G18860","grey","Ubiqui\u0002tin (Ub)-like protein which represents a convergent targeting node among begomovirus viral proteins, direct target of nuclear shuttle protein and movement protein."]
["AT2G01020","grey","5.8SrRNA"]
["AT5G10946","grey","hypothetical protein;(source:Araport11)"]
["AT1G57800","grey","predicted to encode a protein with an N-terminal PHD domain and two RING domains surrounding an SRA domain. Attempts to isolate ORTH3/VIM5 cDNA through RT-PCR were unsuccessful and only one Arabidopsis EST is associated with this locus. A paternally expressed imprinted gene."]
["AT4G03935","grey","None;(source:Araport11)"]
["AT3G59068","grey","Natural antisense transcript overlaps with AT3G59070;(source:Araport11)"]
["AT1G49620","grey","Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. A member of seven KRP genes found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. Binds to D type cyclins and may inhibit cell cycle."]
["AT4G33905","grey","Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein;(source:Araport11)"]
["AT3G18600","grey","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT1G70630","grey","Nucleotide-diphospho-sugar transferase family protein;(source:Araport11)"]
["AT3G61170","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G04235","grey","hypothetical protein;(source:Araport11)"]
["AT2G27800","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G21050","grey","MIZU-KUSSEI-like protein (Protein of unknown function, DUF617);(source:Araport11)"]
["AT5G18260","grey","RING/U-box superfamily protein;(source:Araport11)"]
["AT4G07455","grey","hypothetical protein;(source:Araport11)"]
["AT5G64980","grey","transcription factor;(source:Araport11)"]
["AT2G24592","grey","hypothetical protein;(source:Araport11)"]
["AT3G61080","grey","Protein kinase superfamily protein;(source:Araport11)"]
["AT2G25964","grey","hypothetical protein;(source:Araport11)"]
["AT5G64816","grey","Thionin-like gene."]
["AT3G03305","grey","Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11)"]
["AT1G72645","grey","transmembrane protein;(source:Araport11)"]
["AT2G03140","grey","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT1G26520","grey","Cobalamin biosynthesis CobW-like protein;(source:Araport11)"]
["AT4G04790","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G08770","grey","topoisomerase I damage affected-like protein;(source:Araport11)"]
["AT5G60840","grey","hypothetical protein;(source:Araport11)"]
["AT5G65560","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G01580","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT4G31130","grey","keratin-associated protein (DUF1218);(source:Araport11)"]
["AT5G27110","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT4G15010","grey","Mitochondrial substrate carrier family protein;(source:Araport11)"]
["AT3G05760","grey","C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11)"]
["AT1G49245","grey","Prefoldin chaperone subunit family protein;(source:Araport11)"]
["AT5G13720","grey","Uncharacterized protein family (UPF0114);(source:Araport11)"]
["AT4G28820","grey","HIT-type Zinc finger family protein;(source:Araport11)"]
["AT5G48340","grey","hypothetical protein;(source:Araport11)"]
["AT1G09486","grey","pseudogene of Translation protein SH3-like family protein;(source:Araport11)"]
["AT3G46020","grey","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT1G16250","grey","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT5G07105","grey","None;(source:Araport11)"]
["AT5G02620","grey","Encodes a member of the ankyrin repeat protein. Localized in the endoplasmic reticulum."]
["AT4G23895","grey","Pleckstrin homology (PH) domain-containing protein;(source:Araport11)"]
["AT1G05790","grey","lipase class 3 family protein;(source:Araport11)"]
["AT1G03100","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G26740","grey","organic solute transporter ostalpha protein (DUF300);(source:Araport11)"]
["AT1G77620","grey","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT4G39530","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G09380","grey","RNA polymerase III RPC4;(source:Araport11)"]
["AT3G26700","grey","Protein kinase superfamily protein;(source:Araport11)"]
["AT3G50210","grey","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT1G14770","grey","RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11)"]
["AT4G32930","grey","hypothetical protein;(source:Araport11)"]
["AT1G30130","grey","DUF1365 family protein;(source:Araport11)"]
["AT5G11770","grey","NADH-ubiquinone oxidoreductase 20 kDa subunit;(source:Araport11)"]
["AT3G58900","grey","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT1G77810","grey","Galactosyltransferase family protein;(source:Araport11)"]
["AT3G26920","grey","FBD / Leucine Rich Repeat domains containing protein;(source:Araport11)"]
["AT3G26922","grey","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT2G07777","grey","ATP synthase 9 mitochondrial;(source:Araport11)"]
["AT4G37608","grey","hypothetical protein;(source:Araport11)"]
["AT4G11270","grey","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT2G30700","grey","GPI-anchored protein;(source:Araport11)"]
["AT1G53000","grey","Encodes a mitochondrial-localized CMP-KDO (3-deoxy-D-manno-octulosonate) synthetase. This is the enzyme activating KDO as a nucleotide sugar prior to its incorporation into rhamnogalacturonan-II. Heterozygous mutants are defective in pollen development and in pollen tube elongation."]
["AT1G67620","grey","Lojap-related protein;(source:Araport11)"]
["AT2G25880","grey","Encodes a member of a family of Ser/Thr kinases whose activities peak during cell division. Transcripts are abundant in tissues rich in dividing cells like roots and flowers but are low or absent in fully expanded leaves and stems. In interphase cells, the protein is predominantly nuclear. During mitosis, the protein associates with plant-specific cytoskeletal structures (preprophase band, phragmoplast, nascent cell plate) that are necessary for cytokinesis as well as with the microtubule spindle."]
["AT1G03610","grey","plant/protein (DUF789);(source:Araport11)"]
["AT1G06060","grey","LisH and RanBPM domains containing protein;(source:Araport11)"]
["AT5G50090","grey","PADRE protein."]
["AT5G15240","grey","Transmembrane amino acid transporter family protein;(source:Araport11)"]
["AT5G11090","grey","serine-rich protein-like protein;(source:Araport11)"]
["AT5G39940","grey","FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11)"]
["AT5G18910","grey","Protein kinase superfamily protein;(source:Araport11)"]
["AT2G40570","grey","initiator tRNA phosphoribosyl transferase family protein;(source:Araport11)"]
["AT1G61490","grey","S-locus lectin protein kinase family protein;(source:Araport11)"]
["AT5G19840","grey","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT3G29120","grey","transposable_element_gene;(source:Araport11);hAT-like transposase family (hobo/Ac/Tam3), has a 5.8e-98 P-value blast match to GB:AAD24567 transposase Tag2 (hAT-element) (Arabidopsis thaliana);(source:TAIR10)"]
["AT3G15357","grey","phosphopantothenoylcysteine decarboxylase subunit;(source:Araport11)"]
["AT5G46170","grey","F-box family protein;(source:Araport11)"]
["AT5G23405","grey","HMG-box (high mobility group) DNA-binding family protein;(source:Araport11)"]
["AT2G41790","grey","Insulinase (Peptidase family M16) family protein;(source:Araport11)"]
["AT1G32870","grey","Expression in rosette leaves is activated by high concentration of boron."]
["AT5G63930","grey","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT5G50110","grey","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT5G43450","grey","encodes a protein whose sequence is similar to ACC oxidase"]
["AT4G21065","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G55070","grey","LisH/CRA/RING-U-box domains-containing protein;(source:Araport11)"]
["AT5G25940","grey","early nodulin-like protein;(source:Araport11)"]
["AT5G21970","grey","Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11)"]
["AT4G27652","grey","hypothetical protein;(source:Araport11)"]
["AT4G27657","grey","hypothetical protein;(source:Araport11)"]
["AT2G36320","grey","A20/AN1-like zinc finger family protein;(source:Araport11)"]
["AT5G41330","grey","BTB/POZ domain with WD40/YVTN repeat-like protein;(source:Araport11)"]
["AT1G15230","grey","hypothetical protein;(source:Araport11)"]
["AT1G32740","grey","SBP (S-ribonuclease binding protein) family protein;(source:Araport11)"]
["AT1G79245","grey","pseudogene of Winged helix-turn-helix transcription repressor DNA-binding protein;(source:Araport11)"]
["AT4G38260","grey","transport/golgi organization-like protein (DUF833);(source:Araport11)"]
["AT2G06985","grey","pseudogene of Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G02910","grey","AIG2-like (avirulence induced gene) family protein;(source:Araport11)"]
["AT1G50970","grey","Membrane trafficking VPS53 family protein;(source:Araport11)"]
["AT1G58410","grey","Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11)"]
["AT1G01180","grey","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT1G31880","grey","Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity. BRX encodes a key regulator of cell proliferation and elongation in the root, which has been implicated in the brassinosteroid (BR) pathway as well as regulation of auxin-responsive gene expression. Also involved in cytokinin-mediated inhibition of lateral root initiation. A loss-of-function allele, named brx-2 in Rodrigues et al. (2009) Plant Physiol. but changed to brx-3 to resolve nomenclature conflict (Li et al. Planta 2009:229(3):593-603), shows enhanced response to ABA-mediated inhibition of root growth. Plasma-membrane-associated element of a molecular rheostat that modulates auxin flux through developing protophloem sieve elements (PPSEs) while interacting with PAX, thereby timing PPSE differentiation. Dampens PIN-mediated auxin efflux."]
["AT1G49475","grey","AP2/B3-like transcriptional factor family protein;(source:Araport11)"]
["AT1G65220","grey","ARM repeat superfamily protein;(source:Araport11)"]
["AT4G01960","grey","transmembrane protein;(source:Araport11)"]
["AT1G64710","grey","GroES-like zinc-binding alcohol dehydrogenase family protein;(source:Araport11)"]
["AT5G65687","grey","Major facilitator superfamily protein;(source:Araport11)"]
["AT2G41880","grey","Guanylate kinase. Involved in nucleotide metabolism."]
["AT5G59540","grey","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT3G58050","grey","hypothetical protein;(source:Araport11)"]
["AT1G27530","grey","ubiquitin-fold modifier-conjugating enzyme;(source:Araport11)"]
["AT1G72600","grey","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT2G19380","grey","RNA recognition motif (RRM)-containing protein;(source:Araport11)"]
["AT2G03780","grey","Translin family protein;(source:Araport11)"]
["AT1G29195","grey","PADRE protein up-regulated after infection by S. sclerotiorum."]
["AT1G06237","grey","None;(source:Araport11)"]
["AT5G33395","grey","transposable_element_gene;(source:Araport11);CACTA-like transposase family (Ptta/En/Spm), has a 7.1e-27 P-value blast match to At5g59620.1/14-257 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana);(source:TAIR10)"]
["AT5G47860","grey","Gut esterase (DUF1350);(source:Araport11)"]
["AT4G35510","grey","PHD finger-like protein;(source:Araport11)"]
["AT3G61010","grey","Ferritin/ribonucleotide reductase-like family protein;(source:Araport11)"]
["AT2G45520","grey","coiled-coil protein;(source:Araport11)"]
["AT5G09595","grey","Natural antisense transcript overlaps with AT5G66280;(source:Araport11)"]
["AT2G17972","grey","located in chloroplast, high expression in mature leaf."]
["AT1G56350","grey","Peptide chain release factor 2;(source:Araport11)"]
["AT1G20030","grey","Pathogenesis-related thaumatin superfamily protein;(source:Araport11)"]
["AT1G55535","grey","transmembrane protein;(source:Araport11)"]
["AT3G03330","grey","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT3G63420","grey","heterotrimeric G protein gamma-subunit (AGG1) mRNA,"]
["AT1G71360","grey","Encodes a member of the mid-SUN subfamily of SUN-domain proteins that is localized to both the nuclear envelope and the ER. It is involved in early seed development and nuclear morphology."]
["AT4G08940","grey","Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11)"]
["AT1G22960","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G35345","grey","hypothetical protein;(source:Araport11)"]
["AT2G44630","grey","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT5G03406","grey","Class II aaRS and biotin synthetases superfamily protein;(source:Araport11)"]
["AT5G04750","grey","F1F0-ATPase inhibitor protein;(source:Araport11)"]
["AT2G21500","grey","RING/U-box superfamily protein;(source:Araport11)"]
["AT3G03100","grey","NADH:ubiquinone oxidoreductase, 17.2kDa subunit;(source:Araport11)"]
["AT1G17820","grey","testis-expressed sequence 2-like protein (DUF2404);(source:Araport11)"]
["AT1G78110","grey","nucleolar GTP-binding protein;(source:Araport11)"]
["AT1G01580","grey","Encodes the low-iron-inducible ferric chelate reductase responsible for reduction of iron at the root surface. It is likely to be the major Fe(III) chelate reductase in Arabidopsis iron metabolism. Coordinately regulated with IRT1, the major transporter responsible for high-affinity iron uptake from the soil, at both transcriptional and posttranscriptional levels. Steady state mRNA levels are regulated by several metals. Its transcription is regulated by FIT1."]
["AT2G41150","grey","plant/protein;(source:Araport11)"]
["AT5G61400","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT4G08460","grey","hypothetical protein (DUF1644);(source:Araport11)"]
["AT5G51080","grey","RNase H family protein;(source:Araport11)"]
["AT3G21360","grey","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT1G77410","grey","beta-galactosidase 16;(source:Araport11)"]
["AT5G06265","grey","hyaluronan mediated motility receptor-like protein;(source:Araport11)"]
["AT1G79520","grey","Cation efflux family protein;(source:Araport11)"]
["AT5G22608","grey","hypothetical protein;(source:Araport11)"]
["AT2G11225","grey","hypothetical protein;(source:Araport11)"]
["AT1G61280","grey","Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit;(source:Araport11)"]
["AT1G05030","grey","Major facilitator superfamily protein;(source:Araport11)"]
["AT2G24945","grey","transmembrane protein;(source:Araport11)"]
["AT3G01670","grey","Encodes a protein localized to phloem filaments that is required for phloem filament formation.The mRNA is cell-to-cell mobile."]
["AT1G69280","grey","hypothetical protein;(source:Araport11)"]
["AT2G26970","grey","Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11)"]
["AT1G68410","grey","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT5G17930","grey","MIF4G domain-containing protein / MA3 domain-containing protein;(source:Araport11)"]
["AT2G01630","grey","O-Glycosyl hydrolases family 17 protein;(source:Araport11)"]
["AT1G65070","grey","DNA mismatch repair protein MutS, type 2;(source:Araport11)"]
["AT1G33230","grey","TMPIT-like protein;(source:Araport11)"]
["AT5G46680","grey","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)"]
["AT2G19910","grey","RNA-dependent RNA polymerase family protein;(source:Araport11)"]
["AT5G40530","grey","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT3G24590","grey","Encodes a signal peptidase Plsp1 (plastidic type I signal peptidase 1). Required for thylakoid development. Functions in the maturation of the 75-kD component of the translocon at the outer envelope membrane of chloroplasts and oxygen evolving complex subunit 33 (OE33). Involved in the maturation of PsbO, plastocyanin and FtsH2/8.The mRNA is cell-to-cell mobile."]
["AT1G20230","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G66440","grey","tRNA-methyltransferase non-catalytic subunit trm6MTase subunit;(source:Araport11)"]
["AT5G54260","grey","DNA repair and meiotic recombination protein, component of MRE11 complex with RAD50 and NBS1"]
["AT4G23900","grey","Nucleoside diphosphate kinase family protein;(source:Araport11)"]
["AT1G09870","grey","histidine acid phosphatase family protein;(source:Araport11)"]
["AT5G65207","grey","hypothetical protein;(source:Araport11)"]
["AT5G65205","grey","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT1G34630","grey","transmembrane protein;(source:Araport11)"]
["AT1G77840","grey","Translation initiation factor IF2/IF5;(source:Araport11)"]
["AT5G19025","grey","Ribosomal protein L34e superfamily protein;(source:Araport11)"]
["AT5G14820","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT4G18593","grey","dual specificity protein phosphatase-like protein;(source:Araport11)"]
["AT2G40600","grey","appr-1-p processing enzyme family protein;(source:Araport11)"]
["AT3G51640","grey","stress response NST1-like protein;(source:Araport11)"]
["AT1G24440","grey","RING/U-box superfamily protein;(source:Araport11)"]
["AT3G07255","grey","nuclear transport factor 2/RNA recognition motif protein;(source:Araport11)"]
["AT5G40100","grey","Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11)"]
["AT1G11270","grey","F-box and associated interaction domains-containing protein;(source:Araport11)"]
["AT3G28640","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT4G00040","grey","Chalcone and stilbene synthase family protein;(source:Araport11)"]
["AT5G35935","grey","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 2.0e-232 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea);(source:TAIR10)"]
["AT3G06320","grey","Ribosomal protein L33 family protein;(source:Araport11)"]
["AT1G70570","grey","ASB (putative)"]
["AT1G30290","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G59210","grey","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT2G31290","grey","Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11)"]
["AT3G23570","grey","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT5G19440","grey","similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), apple tree, PIR:T16995; NOT a cinnamyl-alcohol dehydrogenase"]
["AT2G48000","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G15130","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G62770","grey","membrane-associated kinase regulator, putative (DUF1645);(source:Araport11)"]
["AT1G07887","grey","Natural antisense transcript overlaps with AT1G53480;(source:Araport11)"]
["AT1G21790","grey","TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein;(source:Araport11)"]
["AT4G15030","grey","folate-sensitive fragile site protein;(source:Araport11)"]
["AT5G55960","grey","transmembrane protein C9orf5 protein;(source:Araport11)"]
["AT4G03420","grey","hypothetical protein (DUF789);(source:Araport11)"]
["AT4G32580","grey","Thioredoxin superfamily protein;(source:Araport11)"]
["AT4G35750","grey","SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein;(source:Araport11)"]
["AT5G45730","grey","Cysteine/Histidine-rich C1 domain family protein;(source:Araport11)"]
["AT1G10140","grey","Uncharacterized conserved protein UCP031279;(source:Araport11)"]
["AT5G04070","grey","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT5G19830","grey","Peptidyl-tRNA hydrolase family protein;(source:Araport11)"]
["AT4G17915","grey","pseudogene of pentatricopeptide (PPR) repeat-containing/C3HC4-type RING finger containing protein"]
["AT5G06430","grey","Thioredoxin superfamily protein;(source:Araport11)"]
["AT3G50350","grey","membrane insertase, putative (DUF1685);(source:Araport11)"]
["AT5G07740","grey","actin binding protein;(source:Araport11)"]
["AT5G64970","grey","Mitochondrial substrate carrier family protein;(source:Araport11)"]
["AT1G03740","grey","Protein kinase superfamily protein;(source:Araport11)"]
["AT5G13660","grey","N-lysine methyltransferase;(source:Araport11)"]
["AT4G38932","grey","Natural antisense transcript overlaps with AT4G38930;(source:Araport11)"]
["AT4G38930","grey","Ubiquitin fusion degradation UFD1 family protein;(source:Araport11)"]
["AT3G16785","grey","Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Does not appear to be involved in root hair patterning. Not induced upon Pi starvation."]
["AT3G49100","grey","Signal recognition particle, SRP9/SRP14 subunit;(source:Araport11)"]
["AT3G23030","grey","auxin inducible gene expressed in the nucleus"]
["AT1G03580","grey","pseudogene of MATH domain/coiled-coil protein;(source:Araport11)"]
["AT5G65460","grey","Kinesin that binds cyclin-dependent kinase CDKA;1 as homodimer or as heterodimer with KCA1"]
["AT5G10745","grey","transmembrane protein;(source:Araport11)"]
["AT1G78895","grey","Reticulon family protein;(source:Araport11)"]
["AT1G58110","grey","Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11)"]
["AT4G17540","grey","dynamin;(source:Araport11)"]
["AT1G50140","grey","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT5G22040","grey","ubiquitin carboxyl-terminal hydrolase;(source:Araport11)"]
["AT4G39160","grey","Homeodomain-like superfamily protein;(source:Araport11)"]
["AT3G44480","grey","Encodes a TIR-NB-LRR R-protein RPP1 that confers resistance to Peronospora parasitica (downy mildew)."]
["AT3G43590","grey","zinc knuckle (CCHC-type) family protein;(source:Araport11)"]
["AT3G59320","grey","solute carrier family 35 protein (DUF914);(source:Araport11)"]
["AT1G56220","grey","Dormancy/auxin associated family protein;(source:Araport11)"]
["AT2G01010","grey","rRNA;(source:Araport11)"]
["AT5G55100","grey","SWAP (Suppressor-of-White-APricot)/surp domain-containing protein;(source:Araport11)"]
["AT1G68980","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT4G38760","grey","nucleoporin (DUF3414);(source:Araport11)"]
["AT4G11670","grey","DNA topoisomerase 4 subunit B (DUF810);(source:Araport11)"]
["AT4G00590","grey","N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11)"]
["AT3G25805","grey","transmembrane protein;(source:Araport11)"]
["AT5G57230","grey","Thioredoxin superfamily protein;(source:Araport11)"]
["AT5G03370","grey","acylphosphatase family;(source:Araport11)"]
["AT2G17650","grey","AMP-dependent synthetase and ligase family protein;(source:Araport11)"]
["AT4G38050","grey","Xanthine/uracil permease family protein;(source:Araport11)"]
["AT5G27400","grey","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT5G27410.2). Note that the At5g27410.2 gene model (TAIR10) of the adjacent locus has been obsoleted due to the lack of experimental support."]
["AT2G15650","grey","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 5.0e-227 P-value blast match to gb|AAO73527.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family);(source:TAIR10)"]
["AT3G19970","grey","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT3G24080","grey","KRR1 family protein;(source:Araport11)"]
["AT3G02300","grey","Regulator of chromosome condensation (RCC1) family protein;(source:Araport11)"]
["AT1G61350","grey","ARM repeat superfamily protein;(source:Araport11)"]
["AT1G71530","grey","Protein kinase superfamily protein;(source:Araport11)"]
["AT5G18245","grey","Natural antisense transcript overlaps with AT5G18240;(source:Araport11)"]
["AT3G49890","grey","hypothetical protein;(source:Araport11)"]
["AT2G13975","grey","transposable_element_gene;(source:Araport11);similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G43920.1);(source:TAIR10)"]
["AT3G15420","grey","Transcription factor TFIIIC, tau55-related protein;(source:Araport11)"]
["AT2G20815","grey","QWRF motif protein (DUF566);(source:Araport11)"]
["AT5G30490","grey","craniofacial development-like protein;(source:Araport11)"]
["AT2G29070","grey","Ubiquitin fusion degradation UFD1 family protein;(source:Araport11)"]
["AT5G47970","grey","Aldolase-type TIM barrel family protein;(source:Araport11)"]
["AT2G07711","grey","pseudogene of NADH dehydrogenase 5B;(source:Araport11)"]
["AT5G16160","grey","hypothetical protein;(source:Araport11)"]
["AT1G78995","grey","hypothetical protein;(source:Araport11)"]
["AT2G46550","grey","transmembrane protein;(source:Araport11)"]
["AT1G27180","grey","disease resistance protein (TIR-NBS-LRR class);(source:Araport11)"]
["AT3G53440","grey","Homeodomain-like superfamily protein;(source:Araport11)"]
["AT1G48780","grey","hypothetical protein;(source:Araport11)"]
["AT2G17525","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G24680","grey","Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2;(source:Araport11)"]
["AT5G66820","grey","transmembrane protein;(source:Araport11)"]
["AT2G26110","grey","bromodomain protein (DUF761);(source:Araport11)"]
["AT3G12915","grey","Ribosomal protein S5/Elongation factor G/III/V family protein;(source:Araport11)"]
["AT2G15030","grey","pseudogene of WD40/YVTN repeat and Bromo-WDR9-I-like domain-containing protein;(source:Araport11)"]
["AT4G16540","grey","Heat shock protein HSP20/alpha crystallin family;(source:Araport11)"]
["AT2G22120","grey","RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11)"]
["AT3G57170","grey","N-acetylglucosaminyl transferase component family protein / Gpi1 family protein;(source:Araport11)"]
["AT1G07660","grey","Histone superfamily protein;(source:Araport11)"]
["AT4G25680","grey","PPPDE putative thiol peptidase family protein;(source:Araport11)"]
["AT3G18510","grey","ATP-dependent helicase/nuclease subunit;(source:Araport11)"]
["AT5G65660","grey","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT5G24890","grey","stress response NST1-like protein;(source:Araport11)"]
["AT4G07507","grey","transposable_element_gene;(source:Araport11);pseudogene, replication protein A1 -related, similar to putative replication protein A1;(source:TAIR10)"]
["AT5G63690","grey","Nucleic acid-binding, OB-fold-like protein;(source:Araport11)"]
["AT1G09533","grey","None;(source:Araport11)"]
["AT4G38640","grey","Plasma-membrane choline transporter family protein;(source:Araport11)"]
["AT5G40670","grey","PQ-loop repeat family protein / transmembrane family protein;(source:Araport11)"]
["AT2G16710","grey","Iron-sulfur cluster biosynthesis family protein;(source:Araport11)"]
["AT1G10890","grey","arginine/glutamate-rich 1 protein;(source:Araport11)"]
["AT5G06280","grey","hypothetical protein;(source:Araport11)"]
["AT3G49710","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G14220","grey","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 1.6e-167 P-value blast match to GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)GB:BAA78423 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana)gi|4996361|dbj|BAA78423.1| polyprotein (Arabidopsis thaliana) (Ty1_Copia-element);(source:TAIR10)"]
["AT5G01110","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT4G32240","grey","hypothetical protein;(source:Araport11)"]
["AT5G06930","grey","nucleolar-like protein;(source:Araport11)"]
["AT5G60030","grey","hypothetical protein;(source:Araport11)"]
["AT5G23250","grey","Succinyl-CoA ligase, alpha subunit;(source:Araport11)"]
["AT5G32440","grey","Ubiquitin system component Cue protein;(source:Araport11)"]
["AT1G18270","grey","ketose-bisphosphate aldolase class-II family protein;(source:Araport11)"]
["AT3G47840","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G49990","grey","Low temperature viability protein;(source:Araport11)"]
["AT1G17230","grey","Leucine-rich receptor-like protein kinase family protein;(source:Araport11)"]
["AT5G24990","grey","enhanced disease resistance-like protein (DUF1336);(source:Araport11)"]
["AT3G51320","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G07190","grey","B-cell receptor-associated protein 31-like protein;(source:Araport11)"]
["AT3G02010","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G12010","grey","C18orf8;(source:Araport11)"]
["AT2G35790","grey","transmembrane protein;(source:Araport11)"]
["AT1G19310","grey","RING/U-box superfamily protein;(source:Araport11)"]
["AT2G15292","grey","other_RNA;(source:Araport11)"]
["AT3G01130","grey","ATP synthase E chain;(source:Araport11)"]
["AT1G53380","grey","hypothetical protein (DUF641);(source:Araport11)"]
["AT3G47875","grey","transposable_element_gene;(source:Araport11);non-LTR retrotransposon family (LINE), has a 9.1e-40 P-value blast match to GB:BAA20419 reverse transcriptase (LINE-element) (Mus musculus);(source:TAIR10)"]
["AT1G68862","grey","transmembrane protein;(source:Araport11)"]
["AT5G12240","grey","octanoyltransferase;(source:Araport11)"]
["AT1G77090","grey","PSII PsbP family protein, located in chloroplast, involved in change in response to H2O2."]
["AT5G05360","grey","hypothetical protein;(source:Araport11)"]
["AT2G21640","grey","Encodes a protein of unknown function that is a marker for oxidative stress response.Expression in rosette leaves is activated by high concentration of boron."]
["AT3G14580","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G38000","grey","chaperone protein dnaJ-like protein;(source:Araport11)"]
["AT4G24610","grey","pesticidal crystal cry8Ba protein;(source:Araport11)"]
["AT2G34585","grey","transmembrane protein;(source:Araport11)"]
["AT3G54085","grey","Yos1-like protein;(source:Araport11)"]
["AT2G45380","grey","myeloid leukemia factor;(source:Araport11)"]
["AT1G28140","grey","Located in chloroplast and involved in change in response to H2O2."]
["AT2G43240","grey","Nucleotide-sugar transporter family protein;(source:Araport11)"]
["AT3G48187","grey","Serine/Threonine-kinase ATM;(source:Araport11)"]
["AT3G48185","grey","transmembrane protein;(source:Araport11)"]
["AT5G27240","grey","DNAJ heat shock N-terminal domain-containing protein;(source:Araport11)"]
["AT1G55205","grey","hypothetical protein;(source:Araport11)"]
["AT3G01715","grey","U1;(source:Araport11)","(U1-6)"]
["AT3G01695","grey","U1;(source:Araport11)","(U1-7)"]
["AT3G24190","grey","ABC1-type kinase, located in chloroplast, involved in protein phosphorylation.","(ABC1K6)","(ABC1K6)"]
["AT4G31440","grey","transcriptional regulator of RNA polII, SAGA, subunit;(source:Araport11)","(ADA1D)","(ADA1D)"]
["AT3G56900","grey","Encodes ALADIN, a component of the nuclear pore complex.","(ALADIN)","(ALADIN)"]
["AT4G24740","grey","a LAMMER-type protein kinase that co-precipitates with serine/arginine-rich (SR) proteins in vitro, interaction modulated by phosphorylation of the proteins.","FUS3-COMPLEMENTING GENE 2 (FC2)","(AME1);FUS3-COMPLEMENTING GENE 2 (FC2);FUS3-COMPLEMENTING GENE 2 (AFC2)"]
["AT2G30020","grey","Encodes AP2C1. Belongs to the clade B of the PP2C-superfamily. Acts as a MAPK phosphatase that negatively regulates MPK4 and MPK6.","(AP2C1)","(AP2C1)"]
["AT2G32800","grey","protein kinase family protein;(source:Araport11)","L-TYPE LECTIN RECEPTOR KINASE S.2 (LECRK-S.2)","(AP4.3A);L-TYPE LECTIN RECEPTOR KINASE S.2 (LECRK-S.2)"]
["AT3G54840","grey","Encodes a novel Rab-like GTP-ase that is localized to the peripheral membrane of the endosome. . In its active state interferes with the assembly of GDP-bound ARA7, PUF2, and VPS9a by competitively binding to PUF2 to diminish endosomal transport mediated by canonical RAB5.","(ARA6)","(ARA6); (ATRABF1); (ARA-6); (ATRAB5C); (ATARA6)"]
["AT2G30130","grey","Overexpression/activation tagged allele has epinastic leaves, reduced apical dominance and is sterile. Gene is similar to asymmetric leaves (AS)/lateral organ boundary (LOB) genes which repress KNOX gene expression.","(ASL5)","(ASL5); (LBD12);PEACOCK 1 (PCK1)"]
["AT4G32200","grey","meiotic asynaptic mutant 2, homologue of ASY1","(ASY2)","(ASY2)"]
["AT5G64400","grey","CHCH domain protein;(source:Araport11) involved in mechanotransduction. Loss of both At12cys-1 and At12cys-2 lead to enhanced tolerance to drought and light stress and increased anti-oxidant capacity.","(AT12CYS-1)","(AT12CYS-1)"]
["AT1G78690","grey","Encodes a lysoglycerophospholipid O-acyltransferase that acylates 1-acyl lyso PE and 1-acyl lyso PG but not PE or PG.","(At1g78690p)","(At1g78690p)"]
["AT5G57050","grey","Encodes a protein phosphatase 2C and is involved in ABA signal transduction. Binds fibrillin preprotein in vitro and in vivo.","ABA INSENSITIVE 2 (ABI2)","(AtABI2);ABA INSENSITIVE 2 (ABI2)"]
["AT2G31360","grey","Encodes a protein homologous to delta 9 acyl-lipid desaturases of cyanobacteria and acyl-CoA desaturases of yeast and mammals. expression up-regulated by cold temperature. It is involved in the synthesis of the 24:1n-9 and 26:1n-9 components of seed lipids, sphingolipids and the membrane phospholipids phosphatidylserine (PS), and phosphatidylethanolamine (PE).","16:0DELTA9 DESATURASE 2 (ADS2)","(ATADS2);16:0DELTA9 DESATURASE 2 (DS2);16:0DELTA9 DESATURASE 2 (ADS2)"]
["AT1G20220","grey","Together with other ALBA proteins phase separates into stress granules and processing bodies under heat stress and directly binds to and recruits mRNAs to protect from degradation. Confers thermotolerance through stabilizing HSF messenger RNAs in cytoplasmic granules.","(ATALBA2)","(ATALBA2); (ALBA4); (ALBA2)"]
["AT3G03420","grey","Ku70-binding family protein;(source:Araport11)","(ATATP23)","(ATATP23)"]
["AT1G17720","grey","type 2A protein serine/threonine phosphatase 55 kDa B","(ATB BETA)","(ATB BETA)"]
["AT4G20860","grey","involved in the generation of H2O2 from reduced compounds","(ATBBE22)","(ATBBE22);BERBERINE BRIDGE ENZYME 22 (BBE22);CELLODEXTRIN OXIDASE (CELLOX)"]
["AT2G22640","grey","Component of the WAVE protein complex which act as activators of ARP2/3 complex involved in actin nucleation. Required for trichome morphogenesis. Required for accumulation of SCAR1 protein in vivo. Selectively stabilizes SCAR2.","BRICK1 (BRK1)","(ATBRK1);BRICK1 (BRK1); (HSPC300)"]
["AT3G48360","grey","Encodes a protein (BT2) that is an essential component of the TAC1-mediated telomerase activation pathway. Acts redundantly with BT3 and BT1 during female gametophyte development and with BT3 during male gametophyte development. BT2 also mediates multiple responses to nutrients, stresses, and hormones.","BTB AND TAZ DOMAIN PROTEIN 2 (bt2)","(ATBT2);BTB AND TAZ DOMAIN PROTEIN 2 (bt2)"]
["AT4G35040","grey","Basic-region leucine zipper (bZIP19) transcription factor involved in the adaptation to zinc deficiency. Binds ZDRE motifs.","(bZIP19)","(ATBZIP19); (bZIP19)"]
["AT2G24830","grey","zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein;(source:Araport11)","(ATC3H22)","(ATC3H22)"]
["AT2G47850","grey","Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11)","(ATC3H32)","(ATC3H32)"]
["AT3G08505","grey","zinc finger (CCCH-type/C3HC4-type RING finger) family protein;(source:Araport11)","(ATC3H35)","(ATC3H35)"]
["AT5G44200","grey","Encodes a nuclear cap-binding protein that forms a heterodimeric complex with ABH1 (ATCBP80) and is likely to participate in RNA metabolism. Its mRNA is ubiquitously expressed.Loss of function mutations suggest a role in processing of pri-miRNA and mRNA splicing.","CAP-BINDING PROTEIN 20 (CBP20)","(ATCBP20);CAP-BINDING PROTEIN 20 (CBP20)"]
["AT3G58560","grey","Encodes a protein that is involved in mRNA processing and localized to cytoplasmic p-bodies. Double mutants with CCR4b show decreased sensitivity to high concentrations of sucrose. Involved in starch and sucrose metabolism.","(ATCCR4A)","(ATCCR4A)"]
["AT5G04870","grey","A calcium-dependent protein kinase that can phosphorylate phenylalanine ammonia lyase (PAL), a key enzyme in pathogen defense.Phosphorylates, in vivo, the transcription factor ORE1, a master regulator of senescence.","CALCIUM DEPENDENT PROTEIN KINASE 1 (CPK1)","(ATCPK1);CALCIUM DEPENDENT PROTEIN KINASE 1 (CPK1)"]
["AT2G25900","grey","Encodes a protein with two tandem-arrayed CCCH-type zinc fingers that binds RNA and is involved in RNA turnover. The mRNA is cell-to-cell mobile.","(ATCTH)","(ATCTH);A. THALIANA TANDEM ZINC FINGER PROTEIN 1 (ATTZF1);TANDEM ZINC FINGER 1 (TZF1); (ATC3H23)"]
["AT4G16500","grey","Cystatin/monellin superfamily protein;(source:Araport11)","PHYTOCYSTATIN 4 (CYS4)","(ATCYS4);PHYTOCYSTATIN 4 (CYS4)"]
["AT5G26990","grey","Drought-responsive family protein;(source:Araport11)","(ATDIL9-6)","(ATDIL9-6)"]
["AT5G24530","grey","Encodes a putative 2OG-Fe(II) oxygenase that is defense-associated but required for susceptibility to downy mildew. The mRNA is cell-to-cell mobile.","DOWNY MILDEW RESISTANT 6 (DMR6)","(ATDMR6);DOWNY MILDEW RESISTANT 6 (DMR6)"]
["AT5G60850","grey","Encodes a zinc finger protein.","OBF BINDING PROTEIN 4 (OBP4)","(ATDOF5.4);OBF BINDING PROTEIN 4 (OBP4)"]
["AT5G05470","grey","Encodes an eIF2alpha homolog that can be phosphorylated by GCN2 in vitro.","EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ALPHA SUBUNIT (EIF2 ALPHA)","(ateif2-a2); (eif2-a2);EUKARYOTIC TRANSLATION INITIATION FACTOR 2 ALPHA SUBUNIT (EIF2 ALPHA)"]
["AT3G08970","grey","J domain protein localized in ER lumen. Can compensate for the growth defect in jem1 scj1 mutant yeast. Also shows similarity to HSP40 proteins and is induced by heat stress. At high temperatures, mutant alleles are not transmitted through the pollen due to defects in pollen tube growth.","(ATERDJ3A)","(ATERDJ3A);THERMOSENSITIVE MALE STERILE 1 (TMS1)"]
["AT5G03690","grey","Aldolase superfamily protein;(source:Araport11)","FRUCTOSE-BISPHOSPHATE ALDOLASE 4 (FBA4)","(ATFBA4);FRUCTOSE-BISPHOSPHATE ALDOLASE 4 (FBA4)"]
["AT3G51830","grey","putative transmembrane protein G5p (AtG5) mRNA, complete. autophagy-related (ATG) gene","SAC DOMAIN-CONTAINING PROTEIN 8 (SAC8)","(ATG5);SAC DOMAIN-CONTAINING PROTEIN 8 (SAC8)"]
["AT5G26220","grey","ChaC-like family protein;(source:Araport11)","GAMMA-GLUTAMYL CYCLOTRANSFERASE 2;1 (GGCT2;1)","(ATGGCT2;1);GAMMA-GLUTAMYL CYCLOTRANSFERASE 2;1 (GGCT2;1)"]
["AT3G52060","grey","Encodes a plasmodesmal glycosyltransferase-like protein. Mutation results in defects in seed germination and delayed plant growth.","BETA-1,6-N-ACETYLGLUCOSAMINYL TRANSFERASE-LIKE (GNTL)","(ATGNTL);BETA-1,6-N-ACETYLGLUCOSAMINYL TRANSFERASE-LIKE (GNTL)"]
["AT2G30860","grey","Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).","GLUTATHIONE S-TRANSFERASE PHI 9 (GSTF9)","(ATGSTF7);GLUTATHIONE S-TRANSFERASE PHI 9 (GSTF9);GLUTATHIONE S-TRANSFERASE PHI 9 (ATGSTF9); (GLUTTR)"]
["AT5G28300","grey","Encodes a Ca(2+)-dependent CaM-binding protein. AtGT2L specifically targets the nucleus and possesses both transcriptional activation and DNA-binding abilities, implicating its function as a nuclear transcription factor.","GT-2LIKE PROTEIN (GT2L)","(ATGT2L);GT-2LIKE PROTEIN (GT2L)"]
["AT1G05055","grey","Member of transcription factor TFIIH complex. Involved in transcription and DNA repair and interacts with AtXPD.","GENERAL TRANSCRIPTION FACTOR II H2 (GTF2H2)","(ATGTF2H2);GENERAL TRANSCRIPTION FACTOR II H2 (GTF2H2)"]
["AT1G73130","grey","ATG8A/F interacting protein containing a WxxL LIR motif at the C terminus which is essential for interaction with ATG8. Stress (abiotic or biotic) results in the formation of ATG8- and ATI3-labeled punctate structures, likely reflecting increased formation of ATG8-labeled phagophores or autophagosomes. ATI3 proteins probably act as selective autophagy receptors that target specific cellular components during the plant stress response. ATI3 proteins are delivered to the vacuole under ER stress in an autophagy-dependent manner.","(ATI3C)","(ATI3C)"]
["AT1G53530","grey","Mitochondrial ATP-independent protease","(ATIMP1A)","(ATIMP1A)"]
["AT5G03770","grey","Encodes a putative KDO (3-deoxy-D-manno-octulosonate) transferase","KDO TRANSFERASE A (KDTA)","(ATKDTA);KDO TRANSFERASE A (KDTA)"]
["AT3G16230","grey","Putative eukaryotic LigT;(source:Araport11)","(ATKH15)","(ATKH15)"]
["AT3G32940","grey","RNA-binding KH domain-containing protein;(source:Araport11)","(ATKH17)","(ATKH17)"]
["AT5G64390","grey","encodes a K homology (KH) domain-containing, putative RNA binding protein that interacts with HUA1, a CCCH zinc finger RNA binding protein in the nucleus. HEN4 acts redundantly with HUA1 and HUA2 in the specification of floral organ identity in the third whorl. The mRNA is cell-to-cell mobile.","HUA ENHANCER 4 (HEN4)","(ATKH30);HUA ENHANCER 4 (HEN4)"]
["AT1G51580","grey","RNA-binding KH domain-containing protein;(source:Araport11)","(ATKH4)","(ATKH4)"]
["AT2G25970","grey","KH domain-containing protein;(source:Araport11)","(ATKH8)","(ATKH8)"]
["AT1G24880","grey","Similar to bacterial lipid A biosynthetic gene.","LIPID X C2 (LPXC2)","(ATLPXC2);LIPID X C2 (LPXC2)"]
["AT3G21630","grey","LysM receptor-like kinase, based on protein sequence alignment analysis, it has a typical RD signaling domain in its catalytic loop and possesses autophosphorylation activity. Involved in the perception and transduction of the chitin oligosaccharide elicitor. Located in the plasma membrane. CERK1 phosphorylates LIK1, a LLR-RLK that is involved in innate immunity,","CHITIN ELICITOR RECEPTOR KINASE 1 (CERK1)","(ATLYK1);LYSM-CONTAINING RECEPTOR-LIKE KINASE 1 (LYK1); (ATCERK1);CHITIN ELICITOR RECEPTOR KINASE 1 (CERK1);LYSM DOMAIN RECEPTOR-LIKE KINASE 1 (LYSM RLK1)"]
["AT5G01930","grey","Encodes a endo-beta-mannanase involved in seed germination.","ENDO-BETA-MANNASE 6 (MAN6)","(AtMAN6);ENDO-BETA-MANNASE 6 (MAN6)"]
["AT1G53165","grey","Protein kinase superfamily protein;(source:Araport11)","(ATMAP4K ALPHA1)","(ATMAP4K ALPHA1)"]
["AT3G24500","grey","One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is specifically elevated in response to pathogen infection, salinity, drought, heat, hydrogen peroxide, and application of abscisic acid or salicylic acid. Constitutive expression enhances the tolerance of transgenic plants to various biotic and abiotic stresses.","MULTIPROTEIN BRIDGING FACTOR 1C (MBF1C)","(ATMBF1C);MULTIPROTEIN BRIDGING FACTOR 1C (MBF1C)"]
["AT3G09660","grey","Encodes a minichromosome maintenance protein that is involved with RAD51 in a backup pathway that repairs meiotic double strand breaks without giving meiotic crossovers when the major pathway, which relies on DMC1, fails.","MINICHROMOSOME MAINTENANCE 8 (MCM8)","(ATMCM8);MINICHROMOSOME MAINTENANCE 8 (MCM8)"]
["AT4G36290","grey","R-protein-interacting protein that localizes to endosomes and functions in resistance gene?mediated immunity. Belongs to the conserved Microrchidia (MORC) adenosine triphosphatase (ATPase) family, predicted to catalyze alterations in chromosome superstructure. Required for heterochromatin condensation and gene silencing.The expression of MORC1 requires the activity of Plant Mobile Domain proteins MAIN and MAIL1.","COMPROMISED RECOGNITION OF TCV 1 (CRT1)","(ATMORC1);MICROCHIDIA 1 (MORC1);COMPROMISED RECOGNITION OF TCV 1 (CRT1)"]
["AT3G48890","grey","putative progesterone-binding protein homolog (Atmp2) mRNA, The mRNA is cell-to-cell mobile.","MEMBRANE-ASSOCIATED PROGESTERONE BINDING PROTEIN 3 (MAPR3)","(ATMP2);ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED PROGESTERONE BINDING PROTEIN 3 (AtMAPR3);MEMBRANE STEROID BINDING PROTEIN 2 (MSBP2);MEMBRANE-ASSOCIATED PROGESTERONE BINDING PROTEIN 3 (MAPR3)"]
["AT5G43680","grey","Encodes a TatB--like component of the mitochondrial Twin arginine translocation (Tat) pathway. The protein is localized to the inner mitochondrial membrane that is nuclear-encoded and is essential for plant growth and development. Mutants are embryo lethal.","MITOCHONDRIAL TATB-LIKE (MTTATB)","(ATMTTATB);MITOCHONDRIAL TATB-LIKE (MTTATB)"]
["AT5G06100","grey","Encodes a member of the myb family of transcription factors (MYB33), contains Pfam profile: PF00249 myb DNA-binding domain. Double mutants with MYB65 are male sterile- anthers are small, pollen development is defective. Spatial expression appears to be under the control of miR159, contains a target site for this micro RNA. A highly conserved RNA secondary structure abuts the miR159 binding site which facilitates its regulation by miR159. When the target site is mutated, expression is detected in leaves, roots, anther filament, pistil. The expression of a translational fusion is specific to anther locules in contrast to constructs lacking the miR159 target site. Phenotype is conditional and can be restored by lower temperature or higher light intensity.","MYB DOMAIN PROTEIN 33 (MYB33)","(ATMYB33);MYB DOMAIN PROTEIN 33 (MYB33)"]
["AT1G66390","grey","Production of anthocyanin pigment 2 protein (PAP2).","MYB DOMAIN PROTEIN 90 (MYB90)","(ATMYB90);MYB DOMAIN PROTEIN 90 (MYB90);PRODUCTION OF ANTHOCYANIN PIGMENT 2 (PAP2)"]
["AT5G62720","grey","Integral membrane HPP family protein. Putative nitrate transporter.","(ATNITR2;1)","(ATNITR2;1)"]
["AT1G32450","grey","Transmembrane nitrate transporter. Involved in xylem transport of nitrate from root to shoot. Induced in response to high and low concentrations of nitrate. Not involved in nitrate uptake. Expressed in root pericycle cells under the control of MYB59. Also functions as a proton-coupled H+/K+ antiporter for K+ loading into the xylem.","NRT1/ PTR FAMILY 7.3 (NPF7.3)","(ATNPF7.3);NITRATE TRANSPORTER 1.5 (NRT1.5);NRT1/ PTR FAMILY 7.3 (NPF7.3)"]
["AT1G60420","grey","Reduce transmission through pollen. The mRNA is cell-to-cell mobile.","NUCLEOREDOXIN 1 (NRX1)","(ATNRX1);NUCLEOREDOXIN 1 (NRX1)"]
["AT5G18440","grey","Encodes NUFIP that directs assembly of C/D snoRNP (small nucleolar ribonucleoprotein).","NUCLEAR FMRP-INTERACTING PROTEIN (NUFIP)","(AtNUFIP);NUCLEAR FMRP-INTERACTING PROTEIN (NUFIP)"]
["AT5G51540","grey","Mitochondrial ATP-independent protease","(ATOCT1)","(ATOCT1)"]
["ATMG01170","grey","ATPase subunit 6","(ATP6-2)","(ATP6-2)"]
["AT3G07010","grey","Pectate lyase","(ATPLL20)","(ATPLL20)"]
["AT1G10520","grey","Encodes a homolog of the mammalian DNA polymerase lambda that is involved in the repair of UV-B induced DNA damage.","DNA POLYMERASE {LAMBDA} (Pol{lambda})","(AtPol{lambda});DNA POLYMERASE {LAMBDA} (Pol{lambda})"]
["AT5G44110","grey","Encodes a member of the NAP subfamily of ABC transporters whose expression pattern is regulated by light and sucrose.","ATP-BINDING CASSETTE A21 (ABCI21)","(ATPOP1);ATP-BINDING CASSETTE A21 (ABCI21); (POP1);ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN (ATNAP2)"]
["AT1G07745","grey","Is a suppressor of SNI1. Encodes a member of the RecA/RAD51 family of DNA recombination and repair proteins. Both RAD51 and SNI1 have a dual role in pathogen-related gene transcription and somatic homologous recombination.","HOMOLOG OF RAD51 D (RAD51D)","(ATRAD51D);SUPPRESOR OF SNI1 (SSN1);HOMOLOG OF RAD51 D (RAD51D)"]
["AT4G39220","grey","Key player of retrieval of ER membrane proteins","(ATRER1A)","(ATRER1A)"]
["AT1G06770","grey","Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. The DRIP1-GFP fusion protein is nuclear-localized. DRIP1 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.","DREB2A-INTERACTING PROTEIN 1 (DRIP1)","(ATRING1B);DREB2A-INTERACTING PROTEIN 1 (DRIP1); (ATBMI1B); (ATDRIP1); (BMI1B)"]
["AT2G29540","grey","RNA polymerase I(A) and III(C) 14 kDa subunit","RNAPOLYMERASE 14 KDA SUBUNIT (RPC14)","(ATRPAC14);RNAPOLYMERASE 14 KDA SUBUNIT (RPC14);RNAPOLYMERASE 14 KDA SUBUNIT (ATRPC14)"]
["AT1G69270","grey","RPK1 is a leucine-rich receptor-like kinase located in the plasma membrane which is upregulated by abscisic acid, dehydration, high salt, low temperature, but not by other plant hormones. RPK1 knock-out and antisense plants show an ABA-insensitive phenotype. RPK1 plays a role in ABA-controlled cell proliferation and is a regulator of the ABA signal transduction pathway. Overexpression of the LRR domain has a dominant negative effect on RPK1. Mutations in RPK1 uncouple cotyledon anlagen and primordia by modulating epidermal cell shape and polarity.","RECEPTOR-LIKE PROTEIN KINASE 1 (RPK1)","(ATRPK1);RECEPTOR-LIKE PROTEIN KINASE 1 (RPK1)"]
["AT3G26420","grey","Zinc finger-containing glycine-rich RNA-binding protein. Cold-inducible. Contributes to the enhancement of freezing tolerance. Members of this protein family include AT3G26420 (ATRZ-1A), AT1G60650 (AtRZ-1b) and AT5G04280 (AtRZ-1c).","RNA-BINDING GLYCINE-RICH PROTEIN B2 (RBGB2)","(ATRZ-1A);RZ-1A (RZ-1A);RNA-BINDING GLYCINE-RICH PROTEIN B2 (RBGB2)"]
["AT2G28400","grey","Member of the senescence 40 (S40), contains a plant-specific domain of unknown function 548 (DUF548). Expression increases in response to ABA.","(ATS40.4)","(ATS40.4)"]
["AT2G34340","grey","DUR584 domain containing nuclear protein involved in response to ABA.","(ATS40-1L)","(ATS40-1L)"]
["AT1G20160","grey","Encodes two isoforms. One (SBT5.2(a) ) is a secreted, cell wall localized subtilisin-like serine protease that is involved in regulation of stomatal development. The second isoform (SBT5.2(b) is localized to endosomes.","(ATSBT5.2)","(ATSBT5.2); (SBT5.2(A));CO2 RESPONSE SECRETED PROTEASE (CRSP)"]
["AT2G27460","grey","Sec23 homolog , forms a distinct clade with SEC23A.Mutants have defects in pollen exine patterning, tapetal development and pollen intine formation.","(ATSEC23D)","(ATSEC23D)"]
["AT4G14160","grey","Sec23/Sec24 protein transport family protein;(source:Araport11)","(ATSEC23F)","(ATSEC23F)"]
["AT1G29060","grey","Encodes a golgi localized QcSNARE involved in response to salt and osmotic stress. Overexpression confers increased resistance to NaCl, mannitol and LiCl. SFT12 may act by mediating vacuolar sequestration of NaCl and other ions.","(ATSFT12)","(ATSFT12)"]
["AT2G17980","grey","member of SLY1 Gene Family The mRNA is cell-to-cell mobile.","(ATSLY1)","(ATSLY1)"]
["AT5G37370","grey","encodes a putative splicing factor. Over-expression in yeast and Arabidopsis result in increased tolerance to high salt.","(ATSRL1)","(ATSRL1)"]
["AT4G00238","grey","STKL1 is a DUF domain containing DNA binding protein that may be involved in mediating certain glucose responses. Binds to promoter of PGR, a putative plasma membrane glucose response regulator.","(ATSTKL1)","(ATSTKL1)"]
["AT5G23280","grey","Transcription factor which plays an important role during leaf and hypocotyl development, redundantly, with at least six class I TCPs, and regulates the expression of CYCD1;1 to affect endoreplication. Promotes together with TCP8, 14 and 15 endoreduplication-dependent cell expansion in leaf.","TCP DOMAIN PROTEIN 7 (TCP7)","(ATTCP7);TCP DOMAIN PROTEIN 7 (TCP7)"]
["AT5G09860","grey","Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis. One of the pathways affected by THO1 is the miRNA399-PHO2 pathway that regulates root APase activity. Together with RAE2 plays overlapping but distinct roles in the modulation of Al resistance and low Pi response.","(THO1)","(AtTHO1); (THO1);REGULATION OF ATALMT1 EXPRESSION 3 (RAE3); (HPR1); (AtHPR1)"]
["AT4G30480","grey","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808). Interacts with Hsp90/Hsp70 as co-chaperone.","TETRATRICOPEPTIDE REPEAT 1 (TPR1)","(AtTPR1);TETRATRICOPEPTIDE REPEAT 1 (TPR1)"]
["AT1G22270","grey","Encodes SMO2 (Small Organ 2). Modulates progression of cell division during organ growth.","TRNA METHYLTRANSFERASE 112B (TRM112B)","(ATTRM112B);TRNA METHYLTRANSFERASE 112B (TRM112B)"]
["AT5G24840","grey","tRNA (guanine-N-7) methyltransferase;(source:Araport11)","TRNA METHYLTRANSFERASE 8A (TRM8A)","(ATTRM8A);TRNA METHYLTRANSFERASE 8A (TRM8A)"]
["AT2G11890","grey","Encodes a tripolyphosphatase that is involved in root development.","TRIPHOSPHATE TUNNEL METALLOENZYME 3 (TTM3)","(ATTTM3);TRIPHOSPHATE TUNNEL METALLOENZYME 3 (TTM3)"]
["AT4G36690","grey","Regulates flowering time and displays a redundant role in pollen tube growth together with AtU2AF65b.","(ATU2AF65A)","(ATU2AF65A)"]
["AT5G53300","grey","Encodes a ubiquitin conjugating enzyme.","UBIQUITIN-CONJUGATING ENZYME 10 (UBC10)","(ATUBC10);UBIQUITIN-CONJUGATING ENZYME 10 (UBC10)"]
["AT2G24570","grey","member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae.","WRKY DNA-BINDING PROTEIN 17 (WRKY17)","(AtWRKY17);WRKY DNA-BINDING PROTEIN 17 (WRKY17)"]
["AT4G01250","grey","AtWRKY22 is a member of WRKY Transcription Factor; Group II-e. It is involved in regulation of dark induced leaf senescence.","(WRKY22)","(AtWRKY22); (WRKY22)"]
["AT1G74650","grey","Member of the R2R3 factor gene family; wax regulator associated with reproductive development.","MYB DOMAIN PROTEIN 31 (MYB31)","(ATY13);ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 31 (ATMYB31);MYB DOMAIN PROTEIN 31 (MYB31)"]
["AT1G10970","grey","A member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root and shoot. Expression is regulated by copper, but response to copper deficiency is detected only after three weeks of deficiency. Phosphatidylinositol 4-phosphate 5-kinase (PIP5K) enzyme family member.","ZINC TRANSPORTER 4 PRECURSOR (ZIP4)","(ATZIP4);ZINC TRANSPORTER 4 PRECURSOR (ZIP4)"]
["AT1G19910","grey","vacuolar H+-pumping ATPase 16 kDa proteolipid (ava-p2)","(AVA-P2)","(AVA-P2); (AVA-2PE);VACUOLAR-TYPE H+ ATPASE C2 (ATVHA-C2)"]
["AT1G26340","grey","encodes a member of the cytochromes b5 family of proteins that localizes to the outer envelope of the chloroplast. The C-terminal portion of the protein appears to be capable of inserting into a plant microsomal membrane in vitro.","CYTOCHROME B5 ISOFORM A (CB5-A)","(B5 #6);ARABIDOPSIS CYTOCHROME B5 ISOFORM A (ATCB5-A);CYTOCHROME B5 ISOFORM A (CB5-A)"]
["AT3G24100","grey","Encodes a secreted peptide that enhances stress indued cell death.","(BIA)","(BIA)"]
["AT5G61900","grey","Encodes a plasma-membrane localized, copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms. Mutants exhibit temperature-sensitive growth defects and increased hypersensitive response where permissive conditions are low temperature (22 degrees Celsius) and low humidity. Gene is expressed at 22 but not at 28 (restrictive condition) degrees. Lethality of double mutants with BON3 can be partially suppressed by SNC1. Double mutants show defects in development that are genetically separable from hypersensitive/cell death response.","BONZAI 1 (BON1)","(BON);COPINE 1 (CPN1);BONZAI 1 (BON1)"]
["AT2G39760","grey","Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1), AT3G06190 (BPM2), AT2G39760 (BPM3), AT3G03740 (BPM4), AT5G21010 (BPM5) and AT3G43700 (BPM6).","(BPM3)","(BPM3); (ATBPM3)"]
["AT3G09360","grey","Cyclin/Brf1-like TBP-binding protein. Double mutants with BRF1 show defects in pollen development. Controls FES1A regulated thermosensitivity.","(BRF2)","(BRF2)"]
["AT2G40950","grey","bZIP17 appears to regulate transcription as part of a salt and osmotic stress response. zip17 mutants show enhanced inhibition of primary root elongation in response to NaCl. Several salt-responsive genes, such as ATHB-7 show a reduced transcriptional response to a salt treatment in zip17 mutant seedlings. myc:bZIP17 undergoes proteolytic processing in salt-treated wild type seedlings, but not in s1p-3 (subtilase) mutants and there is also evidence for S1P-mediated cleavage of bZIP17 in vitro. In addition, an mGFP:bZIP17 protein moves from the ER to the nucleus following salt treatment. It is cleaved by S2P to allow translocation to the nucleus.","(BZIP17)","(BZIP17)"]
["AT1G08320","grey","bZIP transcription factor family protein;(source:Araport11)","TGACG (TGA) MOTIF-BINDING PROTEIN 9 (TGA9)","(bZIP21);TGACG (TGA) MOTIF-BINDING PROTEIN 9 (TGA9)"]
["AT1G05170","grey","Putative beta 1,3-galactosyltransferase that acts redundantly with CAGE2 during primary and secondary cell wall biosynthesis.","(CAGE1)","(CAGE1)"]
["AT5G13000","grey","encodes a gene similar to callose synthase; co-localizes with PLDLP5.","GLUCAN SYNTHASE-LIKE 12 (GSL12)","(CALS3);GLUCAN SYNTHASE-LIKE 12 (ATGSL12);CALLOSE SYNTHASE 3 (CALS3);GLUCAN SYNTHASE-LIKE 12 (GSL12); (gsl12)"]
["AT5G37630","grey","ARM repeat superfamily protein;(source:Araport11)","EMBRYO DEFECTIVE 2656 (EMB2656)","(CAP-G);EMBRYO DEFECTIVE 2656 (EMB2656)"]
["AT5G37740","grey","Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11)","(CAR1)","(CAR1)"]
["AT4G26770","grey","Phosphatidate cytidylyltransferase family protein;(source:Araport11)","(CDS3)","(CDS3)"]
["AT5G50920","grey","Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery. Association of Hsp93 with the inner envelope membrane through its N domain is important for the functions of Hsp93 in vivo.","CLPC HOMOLOGUE 1 (CLPC1)","(CLPC); (ATHSP93-V);INCREASED RESISTANCE TO MYZUS PERSICAE 1 (IRM1);DE-REGULATED CAO ACCUMULATION 1 (DCA1);CLPC HOMOLOGUE 1 (CLPC1);HEAT SHOCK PROTEIN 93-V (HSP93-V)"]
["AT1G09130","grey","ATP-dependent caseinolytic (Clp) protease/crotonase family protein;(source:Araport11)","(CLPR3)","(CLPR3)"]
["AT1G62880","grey","ER cargo receptor","(CNIH3)","(CNIH3)"]
["AT1G03180","grey","Functions in chromosome axis remodeling and synapsis along with co factors PCH2 and ASY1.Required for chiasma formation.","(COMET)","(COMET)"]
["AT2G07687","grey","De novo gene originating from the mitochondria; controls floral transition.","(COX3)","(COX3)"]
["AT5G56500","grey","Encodes a subunit of chloroplasts chaperonins that are involved in mediating the folding of newly synthesized, translocated, or stress-denatured proteins. Cpn60 subunits are: Cpn60alpha1 (At2g28000), AtCpn60alpha2 (At5g18820), AtCpn60beta1 (At1g55490), AtCpn60beta2 (At3g13470), AtCpn60beta3 (At5g56500), AtCpn60beta4 (At1g26230).","CHAPERONIN-60BETA3 (CPN60BETA3)","(CPNB3);CHAPERONIN-60BETA3 (CPN60BETA3)"]
["AT5G46390","grey","C-terminal peptidase","(CTPC)","(CTPC)"]
["AT3G20630","grey","Encodes a ubiquitin-specific protease. Identical to TTN6. Loss of function mutations are embryo lethals, having development arrested at the preglobular/globular stage. Also involved in root responses to phosphate deficiency.","UBIQUITIN-SPECIFIC PROTEASE 14 (UBP14)","(DA3); (TARANI);UBIQUITIN-SPECIFIC PROTEASE 14 (UBP14);TITAN6 (TTN6); (ATUBP14);PHOSPHATE DEFICIENCY ROOT HAIR DEFECTIVE1 (PER1);TARANI (TNI)"]
["AT3G30720","grey","QQS is an orphan gene that arose recently in the Arabidopsis thaliana lineage. It was first identified in a screen for genes with altered expression pattern in SS3 mutants which make an abundance of starch. Overexpression of QQS in Arabidopsis increases protein content and decreases total starch content. Thus it appears to function to modulate carbon/nitrogen allocation in Arabidopsis. Over expression of QQS in soybean, rice and maize also results in an increase in protein and decrease in starch levels suggesting that QQS affects similar pathways in a wide range of plants. QQS interacts with NF-YC4 in Arabidopsis and NF-YC4 homologs in rice, soybean and maize. In Arabidopsis QQS is localized the the cytoplasm and when complexed with NF-YC4 , it localizes to the nucleus. Putative OXS2-binding DEGs were constitutively activated by OXS2.","QUA-QUINE STARCH (QQS)","(DEG6);QUA-QUINE STARCH (QQS)"]
["AT3G07090","grey","Interacts with C3H59 via its WD40 domain and C-terminal region, respectively, in the nucleus.","(DESI1)","(DESI1)"]
["AT1G76880","grey","DF1 is a putative transcription factor required for the synthesis of seed mucilage polysaccharides. The df1 seeds produce almost 50% less mucilage than wild-type, but show less severe defects than the myb5 and ttg2 mutants.","(DF1)","(DF1)"]
["AT1G02750","grey","Drought-responsive family protein;(source:Araport11)","(DIL-2)","(DIL-2)"]
["AT5G02470","grey","core cell cycle genes","(DPA)","(DPA)"]
["AT2G17190","grey","Encodes a ubiquitin receptor protein that specifically associates with PEX2 and PEX12.","(DSK2A)","(DSK2A)"]
["AT3G19780","grey","Interacts with chloroplast chaperone CLPC1, which unfolds and delivers substrates to the stromal CLPPRT protease complex for degradation.","(DUF179)","(DUF179)"]
["AT5G14970","grey","Interacts with chloroplast chaperone CLPC1, which unfolds and delivers substrates to the stromal CLPPRT protease complex for degradation.","(DUF760-7)","(DUF760-7)"]
["AT5G55070","grey","Encodes the E2 subunit of the 2-oxoglutarate dehydrogenase.","(E2-OGDH2)","(E2-OGDH2)"]
["AT1G22250","grey","EAR (Ethylene-responsive element binding factor-associated Amphiphilic Repression) motif-containing ABA up-regulated transcription repressor which regulates ABA response together with EAU1.","(EAU2)","(EAU2)"]
["AT1G07940","grey","Translation initiation elongation factor 1A.","(EF1A)","(EF1A)"]
["AT1G18070","grey","Translation elongation factor EF1A/initiation factor IF2gamma family protein;(source:Araport11)","(EF-1alpha)","(EF-1alpha)"]
["AT5G10120","grey","Ethylene insensitive 3 family protein;(source:Araport11)","(EIL4)","(EIL4)"]
["AT3G22840","grey","Encodes an early light-inducible protein.","EARLY LIGHT-INDUCABLE PROTEIN (ELIP1)","(ELIP);EARLY LIGHT-INDUCABLE PROTEIN (ELIP1)"]
["AT4G04360","grey","transmembrane protein, putative (DUF1068);(source:Araport11)","(ELMO3)","(ELMO3)"]
["AT1G27540","grey","Involved in ABA-inhibited seed germination and seedling growth including modulation of ROS homeostasis in roots.","F-BOX/DUF295 BRASSICEAE-SPECIFIC 2 (ATFDB2)","(FDB2);F-BOX/DUF295 BRASSICEAE-SPECIFIC 2 (ATFDB2)"]
["AT5G48570","grey","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","(ROF2)","(FKBP65); (ATFKBP65); (ROF2)"]
["AT2G18735","grey","Trans-acting lncRNA which affects alternative splicing of LAC8 and represses flowering; binds to chromatin regions of target genes.","(FLAIL)","(FLAIL)"]
["AT2G36250","grey","Encodes one of two FtsZ proteins, tubulin-like proteins, in Arabidopsis. It is involved in chloroplast division.","(FTSZ2-1)","(FTSZ2-1); (ATFTSZ2-1)"]
["AT3G12570","grey","FYD;(source:Araport11)","(FYD)","(FYD)"]
["AT5G16050","grey","Encodes GF14 upsilon chain, a 14-3-3 gene family member.","GENERAL REGULATORY FACTOR 5 (GRF5)","(GF14 UPSILON);GENERAL REGULATORY FACTOR 5 (GRF5)"]
["AT3G26430","grey","Encodes a functioning member of the GDS(L) lipase family with preference for long chain substrates that does not hydrolyze choline esters.","(GGL20)","(GGL20)"]
["AT2G14960","grey","encodes a protein similar to IAA-amido synthases. Lines carrying an insertion in this gene are hypersensitive to auxin. Group II member of the GRETCHEN HAGEN 3 (GH3) gene family which code for acyl acid amido synthetases catalysing the conjugation of IAA to amino acids.","(GH3.1)","(GH3.1)"]
["AT1G08750","grey","GPI8/PIG-K homolog involved in stomata development. Loss of function alleles do not transmit through the pollen.","(GPI8)","(GPI8); (ATGPI8)"]
["AT1G76890","grey","encodes a plant trihelix DNA-binding protein","(GT2)","(GT2); (AT-GT2)"]
["AT3G18520","grey","Encodes a protein with similarity to histone deacetylases. The histone deacetylase domain of HDA15 (HDA15HD) assembles as tetrameric forms with each monomer composed of 12 alpha-helices and 9 beta-sheets (DOI: 10.1104/pp.20.00604).Plants expressing RNAi directed against this gene show a moderate resistance to agrobacterium-mediated root transformation. Class II RPD3-like family HDAC member which controls negative responses to salinity stress.","HISTONE DEACETYLASE 15 (HDA15)","(HDA15);HISTONE DEACETYLASE 15 (HDA15); (ATHDA15)"]
["AT2G26540","grey","Encodes a uroporphyrinogen-III synthase involved in tetrapyrrole biosynthesis. The protein localizes to the chloroplast. Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype","(HEMD)","(HEMD);UROPORPHYRINOGEN III SYNTHASE (UROS);ARABIDOPSIS THALIANA UROPORPHYRINOGEN III SYNTHASE (ATUROS);DOMAIN OF UNKNOWN FUNCTION 724 3 (ATDUF3);DOMAIN OF UNKNOWN FUNCTION 724 3 (DUF3)"]
["AT4G03205","grey","Coproporphyrinogen III oxidase;(source:Araport11)","(hemf2)","(hemf2)"]
["AT5G53060","grey","Encodes a KH domain-containing putative RNA-binding protein RCF3. Functions as a upstream regulator for heat stress-responsive gene expression and thermotolerance and mediation of jasmonate signalling.Also shown to interact with HYL1 and is a component of the nuclear dicing body and to function in primary miRNA processing.","REGULATOR OF CBF GENE EXPRESSION 3 (RCF3)","(HOS5);REGULATOR OF CBF GENE EXPRESSION 3 (RCF3); (ATKH28);ENHANCED STRESS RESPONSE 1 (ESR1);SHINY 1 (SHI1)"]
["AT1G07790","grey","Encodes a histone 2B (H2B) protein.","(HTB1)","(HTB1)"]
["AT1G09060","grey","JMJ24 is a nuclear localized JmjC domain containing protein. It has been shown to bind to transcribed regions AtSN1 and solo LTR and the promoter of SDC. JMJ24 appears to regulate basal levels of transcription of silenced loci in part by controlling methylation in heterochromatic regions.","(JMJ24)","(JMJ24)"]
["AT4G16360","grey","Component of the regulatory subunit of SNF1-related protein kinase. As part of the regulatory complex it binds maltose which promotes kinase activity.","(KINbeta2)","(KINbeta2)"]
["AT1G12290","grey","NLR protein localized to plasma membrane. Overexpression triggers cell death. Has myristolation site at Gly2 which is required for membrane localization.","(L5)","(L5)"]
["AT1G75850","grey","VPS35 homolog B;(source:Araport11)","VPS35 HOMOLOG B (VPS35B)","(LAZ4);VPS35 HOMOLOG B (VPS35B)"]
["AT3G20270","grey","Encodes one of the two LBP/BPI related proteins (AT1G04970/LBR-1, AT3G20270/LBR-2) that bind to LPS directly and regulate PR1 expression.","(LBR-2)","(LBR-2)"]
["AT4G31050","grey","Redundant octanoyltransferase.","OCTANOYL- TRANSFERASE (LIP2)","(LIP2P1);OCTANOYL- TRANSFERASE (LIP2)"]
["AT3G62810","grey","complex 1 family protein / LVR family protein;(source:Araport11)","(LYRM7)","(LYRM7); (MZM1)"]
["AT4G24480","grey","Raf-like kinase required for stomatal vapor pressure difference response.","(M3K&#948;5)","(M3K&#948;5); (RAF6)"]
["AT2G30530","grey","zinc finger CCCH domain protein;(source:Araport11)","(MADA4)","(MADA4)"]
["AT1G03090","grey","MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion.","(MCCA)","(MCCA)"]
["AT5G12230","grey","Associates with ORE1 to activate -N senescence responsive genes.","(MED19A)","(MED19A)"]
["AT5G19910","grey","SOH1 family protein;(source:Araport11)","(MED31)","(MED31)"]
["AT2G48110","grey","Encodes a novel protein of unknown function with homologs in non-seed plants. Sequence analysis predicts membrane spanning domains and a putative protein-protein interaction domain. Semi-dominant mutations display defects in phenylpropanoid accumulation suggesting a role in phenylpropanoid metabolism. It has been shown to physically associate with the conserved transcriptional coregulatory complex, Mediator, and is involved in the regulation of phenylpropanoid homeostasis. Required for expression of some dark-upregulated genes.","REDUCED EPIDERMAL FLUORESCENCE 4 (REF4)","(MED5B); (MED33B);REDUCED EPIDERMAL FLUORESCENCE 4 (REF4)"]
["AT1G19340","grey","MT-A70 family methyltransferase which functions as U2 snRNA MTase for N6&#8722;2?-O-dimethyladenosine (m6Am) in vivo that regulates flowering time, and specifically catalyzes N6-methylation of 2?-O-methyladenosine (Am) within a single-stranded RNA in vitro.","(METTL4)","(METTL4)"]
["AT4G10090","grey","elongator protein 6;(source:Araport11)","ELONGATOR PROTEIN 6 (ELP6)","(MOP2);ELONGATOR PROTEIN 6 (ELP6)"]
["AT4G17080","grey","Golgi localized MORN domain protein that confers heat and freezing tolerance.","(MORN1)","(MORN1)"]
["AT1G18150","grey","Encodes mitogen-activated protein kinase 8 (MPK8). MPK8 connects protein phosphorylation, Ca2+, and ROS in the wound-signaling pathway.","(ATMPK8)","(MPK8); (ATMPK8)"]
["AT4G09620","grey","Mitochondrial transcription termination factor family protein;(source:Araport11)","(MTERF12)","(MTERF12)"]
["AT1G79220","grey","Mitochondrial transcription termination factor family protein;(source:Araport11)","(MTERF17)","(MTERF17)"]
["AT1G62150","grey","Mitochondrial transcription termination factor family protein;(source:Araport11)","(MTERF20)","(MTERF20)"]
["AT1G61960","grey","Mitochondrial transcription termination factor family protein;(source:Araport11)","(MTERF28)","(MTERF28)"]
["AT1G61970","grey","Mitochondrial transcription termination factor family protein;(source:Araport11)","(MTERF29)","(MTERF29)"]
["AT1G61980","grey","Mitochondrial transcription termination factor family protein;(source:Araport11)","(MTERF30)","(MTERF30)"]
["AT1G62110","grey","Mitochondrial transcription termination factor family protein;(source:Araport11)","(MTERF31)","(MTERF31)"]
["AT1G62120","grey","Mitochondrial transcription termination factor family protein;(source:Araport11)","(MTERF32)","(MTERF32)"]
["AT3G46950","grey","Mitochondrial transcription termination factor family protein;(source:Araport11)","(MTERF33)","(MTERF33)"]
["AT2G04620","grey","Encodes a Zn transporter that localizes to the Golgi apparatus and forms a functional complex with AtMTP5t1 to transport Zn into the Golgi.","(MTP12)","(MTP12)"]
["AT3G11850","grey","myosin-binding protein (Protein of unknown function, DUF593);(source:Araport11)","(MYOB8)","(MYOB8)"]
["AT2G39020","grey","Although this locus shares considerable sequence similarity with the adjacent NATA1 gene (At2g39030), they appear to encode genes with different functions. NATA1 is involved in the production of N-delta-acetylornithine, but, overexpression of At2g39020 in tobacco does not lead to the formation of this defense compound. The mRNA is cell-to-cell mobile.","(NATA2)","(NATA2);GCN5&#8208;RELATED N&#8208;ACETYLTRANSFERASE 8 (GNAT8)"]
["AT3G54200","grey","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11)","(NHL39)","(NHL39)"]
["AT4G08790","grey","NIT1 amidase involved in the breakdown of deaminated glutathione (dGSH). It is active towards dGSH and dOA with a preference for dGSH.","(NIT1)","(NIT1)"]
["AT1G10300","grey","GTPase involved in HA - and ABA-mediated signaling pathways, particularly during defense respnses to pathogens. A truncated version of NOG1-2 has been detected in Col-0, Ler-0, Rsch-4 ecotypes. Functions similarly to the paralogous gene NOG1-1.","(NOG1-2)","(NOG1-2)"]
["AT2G04410","grey","Member of the RIN4-like/NOI family; upregulated after spider mite feeding.","(NOI12)","(NOI12)"]
["AT5G64850","grey","Member of the RIN4-like/NOI family; upregulated after spider mite feeding.","(NOI6)","(NOI6)"]
["AT5G18230","grey","transcription regulator NOT2/NOT3/NOT5 family protein;(source:Araport11)","(NOT3)","(NOT3)"]
["AT5G41010","grey","Non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB12.","(NRPB12)","(NRPB12); (NRPE12); (NRPD12)"]
["AT2G04630","grey","One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II and V; homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At5g51940.","(NRPB6B)","(NRPB6B); (NRPE6B)"]
["AT5G59180","grey","Non-catalytic subunit specific to DNA-directed RNA polymerase II; the ortholog of budding yeast RPB7","(NRPB7)","(NRPB7)"]
["AT1G34770","grey","Encodes a nuclear localized, structural subunit of the SMC 5/6 complex and a non- SMC element. Loss of function results in abnormal cell division and embryo lethality. Analysis of partially rescued lines indicates a role in double strand break DNA repair. Similar phenotype to NSE1 which it also interacts with.Maintains cell viability together with NSE1 during early embryogenesis.","(NSE3)","(NSE3)"]
["AT1G53590","grey","Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11)","(NTMC2T6.1)","(NTMC2TYPE6.1); (NTMC2T6.1)"]
["AT3G45750","grey","Nucleotidyltransferase family protein;(source:Araport11)","(NTP4)","(NTP4)"]
["AT1G74700","grey","Encodes a protein with RNAse Z activity suggesting a role in tRNA processing.","TRNASE Z1 (TRZ1)","(NUZ);TRNASE Z1 (TRZ1)"]
["ATMG01370","grey","transmembrane protein;(source:Araport11)","(ORF111D)","(ORF111D)"]
["ATMG00640","grey","encodes a plant b subunit of mitochondrial ATP synthase based on structural similarity and the presence in the F(0) complex.","(ORF25)","(ORF25)"]
["AT3G44370","grey","Member of the Oxa1 super family protein insertases.It is structurally distinct having a tetratricopeptide repeat (TPR) domain at the C terminus. Paralog of OXA2a. Involved in biogenesis of mitochondrial respiratory chain complex IV, specifically via membrane insertion of COX2.","(OXA2B)","(OXA2B)"]
["AT5G65260","grey","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)","(PABN3)","(PABN3)"]
["AT3G23670","grey","Microtubule motor kinesin PAKRP1L/Kinesin-12B. Together with PAKRP1/Kinesin-12A, serve as linkers of the plus ends of antiparallel microtubules in the phragmoplast.","(KINESIN-12B)","(PAKRP1L); (KINESIN-12B)"]
["AT2G35795","grey","PAM18 homolog; part of Presequence Translocase-Associated Motor (PAM) complex which powers the translocation of proteins across the inner membrane and consists of Hsp70, the J-domain containing co-chaperones, Pam16 and Pam18, and their associated proteins Tim15 and Mge1; targeted to both the mitochondria and plastids.","(PAM18-1)","(PAM18-1)"]
["AT3G09700","grey","PAM18 homolog; part of Presequence Translocase-Associated Motor (PAM) complex which powers the translocation of proteins across the inner membrane and consists of Hsp70, the J-domain containing co-chaperones, Pam16 and Pam18, and their associated proteins Tim15 and Mge1.","(PAM18-2)","(PAM18-2)"]
["AT3G03030","grey","PAM18 homolog; part of Presequence Translocase-Associated Motor (PAM) complex which powers the translocation of proteins across the inner membrane and consists of Hsp70, the J-domain containing co-chaperones, Pam16 and Pam18, and their associated proteins Tim15 and Mge1.","(PAM18-3)","(PAM18-3)"]
["AT3G48760","grey","DHHC-type zinc finger family protein;(source:Araport11)","(PAT5)","(PAT5)"]
["AT1G72160","grey","Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11)","(PATL3)","(PATL3)"]
["AT4G09160","grey","PATLs belong to a family of proteins having a Golgi dynamics (GOLD) domain in tandem with the Sec14p-like domain. PATLs are auxin regulated. Quadruple mutants (patl2456) show altered PIN1 lateralization in root endodermis cells.","(PATL5)","(PATL5)"]
["AT3G07640","grey","period circadian protein;(source:Araport11)","(PBAC5)","(PBAC5)"]
["AT1G17330","grey","cGMP-activated phosphodiesterase responsible for UVA induced decrease in cGMP.","CYCLIC NUCLEOTIDEDEPENDENT PHOSPHODIESTERASE 1 (CN-PDE1)","(PDE1);CYCLIC NUCLEOTIDEDEPENDENT PHOSPHODIESTERASE 1 (CN-PDE1)"]
["AT5G47690","grey","One of 5 PO76/PDS5 cohesion cofactor orthologs of Arabidopsis.","(PDS5A)","(PDS5); (ATPDS5A); (PDS5A)"]
["AT3G27325","grey","ER localized GPI inositol-deacylase. Involved in GPI-anchor remodeling.","(PGAP1)","(PGAP1)"]
["AT4G11810","grey","Encodes an SPX domain protein that transports Pi into the vacuole. Overexpression of PHT5:2 leads to massive Pi sequestration into vacuoles and altered regulation of Pi starvation-responsive genes.","(PHT5;2)","(PHT5;2)"]
["AT2G01600","grey","ANTH domain-containing protein which functions as adaptor protein for clathrin-mediated endocytosis (CME) of the secretory vesicle-associated longintype R-SNARE VAMP72 group. Interacts with the SNARE domain of VAMP72 and clathrin at the plasma membrane. Required for recycling of R-SNARE proteins.","(PICALM1A)","(PICALM1A)"]
["AT1G14910","grey","ANTH domain-containing protein which functions as adaptor protein for clathrin-mediated endocytosis (CME) of the secretory vesicle-associated longintype R-SNARE VAMP72 group. Interacts with the SNARE domain of VAMP72 and clathrin at the plasma membrane. Required for recycling of R-SNARE proteins.","(PICALM1B)","(PICALM1B)"]
["AT1G10900","grey","Phosphatidylinositol 4-phosphate 5-kinase.","(PIP5K7)","(PIP5K7)"]
["AT3G60670","grey","PLATZ transcription factor family protein;(source:Araport11)","(PLATZ10)","(PLATZ10)"]
["AT4G37070","grey","Patatin-related phospholipase A. Expressed strongly and exclusively in roots. AtplaIVA-null mutants have reduced lateral root development. Phosphorylation by calcium-dependent protein kinases in vitro enhances its activity.","(PLP1)","(PLP1); (PLA IVA);PHOSPHOLIPASE A IVA (AtPLAIVA)"]
["AT1G80830","grey","Thought to be involved in iron homeostasis. Induced in leaves in response to iron deficiency. Transgenic plants accumulate toxic levels of iron. Gene complements yeast iron uptake mutants.","NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1 (NRAMP1)","(PMIT1); (ATNRAMP1);NATURAL RESISTANCE-ASSOCIATED MACROPHAGE PROTEIN 1 (NRAMP1)"]
["AT2G46890","grey","3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295);(source:Araport11)","(PNET3)","(PNET3)"]
["AT1G78650","grey","Similar to DNA polymerase delta (POLD3), which in other organism was shown to be involved in the elongation of DNA replication.","(POLD3)","(POLD3)"]
["AT3G26020","grey","Encodes protein phosphatase 2A (PP2A) B'eta subunit. Targeted to nucleus and cytosol.","(PP2AB'ETA)","(PP2AB'ETA)"]
["AT1G76950","grey","Member of PRAF/RLD family of proteins. Functions in asymmetric cell division during stomatal development via polar localization of BASL mediated by GN pathway.","(PRAF1)","(PRAF1); (RLD1); (PRAF4)"]
["AT1G04080","grey","Encodes a U1 small nuclear ribonucleoprotein (snRNP) factor involved in alternative splicing.","(PRP39A)","(PRP39A); (PRP39)"]
["AT1G05385","grey","Encodes a Psb27 homolog involved in photosystem II biogenesis.","LOW PSII ACCUMULATION 19 (LPA19)","(Psb27-H1);LOW PSII ACCUMULATION 19 (LPA19)"]
["AT5G67340","grey","Plant U-box type E3 ubiquitin ligase (PUB).","(PUB2)","(PUB2)"]
["AT5G65920","grey","Plant U-box type E3 ubiquitin ligase (PUB) regulared by PIF4 to alter cortical microtubule reorganization to promote hypocotyl cell elongation during thermomorphogenesis.","(PUB31)","(PUB31)"]
["AT2G45910","grey","Plant U-box type E3 ubiquitin ligase (PUB). Positive regulator of plant immunity. Cyclophilin effector Al106 may interact with plant PUB33 to suppress plant immunity and facilitate insect feeding in a PPIase activity-dependent manner.","(PUB33)","(PUB33)"]
["AT1G24330","grey","Plant U-box type E3 ubiquitin ligase (PUB).","(PUB6)","(PUB6)"]
["AT1G67530","grey","ARM repeat superfamily protein;(source:Araport11)","(PUB7)","(PUB7)"]
["AT2G42640","grey","Mitogen activated protein kinase kinase kinase-like protein;(source:Araport11)","(RAF14)","(RAF14); (M3K&#952;2)"]
["AT5G57610","grey","kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein;(source:Araport11)","(RAF35)","(RAF35)"]
["AT1G11650","grey","Encodes an RNA binding protein with three RNA recognition motifs. The mRNA is cell-to-cell mobile.","(RBP45B)","(RBP45B); (ATRBP45B)"]
["AT5G63630","grey","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","(RH31)","(RH31)"]
["AT5G12350","grey","Member of PRAF/RLD family of proteins. Functions in asymmetric cell division during stomatal development via polar localization of BASL mediated by GN pathway.","(PRAF8)","(RLD2); (PRAF8)"]
["AT3G19440","grey","Enzyme for the pseudouridine (&#936;) to uridine (U) conversion.","(RLUA2)","(RLUA2)"]
["AT1G76050","grey","Enzyme for the pseudouridine (&#936;) to uridine (U) conversion.","(RLUA5)","(RLUA5)"]
["AT1G08390","grey","Involved in preserving the stability of 45S rDNA repeats.","(RMI2)","(RMI2)"]
["AT1G71980","grey","RMR2 is a secretory pathway protein localized to the trans-golgi network. It belongs to a family of vacuolar sorting receptors. If forms heterodimers with RMR1.","(RMR2)","(RMR2)"]
["AT3G23580","grey","Encodes one of the 3 ribonucleotide reductase (RNR) small subunit genes (RNR2A). Functionally redundant with the ribonucleotide reductase TSO2. mRNA was shown to specifically accumulate during the S-phase of the cell cycle in synchronized tobacco BY2 cells. Critical for cell cycle progression, DNA damage repair and plant development.","RIBONUCLEOTIDE REDUCTASE 2A (RNR2A)","(RNR2);RIBONUCLEOTIDE REDUCTASE 2A (RNR2A)"]
["AT3G02920","grey","Replication protein A, subunit RPA32;(source:Araport11)","(RPA32B)","(RPA32B); (ATRPA32B);REPLICATION PROTEIN A 2B (RPA2B)"]
["AT5G45400","grey","Replication factor-A protein 1-like protein;(source:Araport11)","(RPA70C)","(RPA70C);REPLICATION PROTEIN A 1C (RPA1C); (ATRPA70C)"]
["AT5G63110","grey","RPD3-like histone deacetylase. HDA6 mutations specifically increase the expression of auxin-responsive transgenes, suggesting a role in transgene silencing.","HISTONE DEACETYLASE 6 (HDA6)","(RPD3B); (SIL1);HISTONE DEACETYLASE 6 (HDAC6);HISTONE DEACETYLASE 6 (HDA6); (AXE1);HISTONE DEACETYLASE 6 (ATHDA6);RNA-MEDIATED TRANSCRIPTIONAL SILENCING 1 (RTS1)"]
["AT2G34480","grey","Encodes a nuclear localized member of the ribosomal L18ae/LX protein family. Loss of function mutations show reduced transmission through the gametophytes and embryo lethality.","(RPL18AB)","(RPL18AB);RIBOSOMAL PROTEIN EL20Y (EL20Y)"]
["AT1G29965","grey","cytosolic ribosomal protein gene, part of eL20 family","(RPL18AD)","(RPL18AD);RIBOSOMAL PROTEIN EL20W (EL20W)"]
["AT1G15250","grey","cytosolic ribosomal protein gene, part of eL20 family","(RPL37A)","(RPL37A);RIBOSOMAL PROTEIN EL37Z (EL37Z)"]
["AT1G59218","grey","Similar to disease resistance proteins.","(RPP13)","(RPP13)"]
["AT2G19750","grey","Ribosomal protein S30 family protein;(source:Araport11)","(RPS30A)","(RPS30A);RIBOSOMAL PROTEIN ES30Z (ES30Z)"]
["AT4G29390","grey","Ribosomal protein S30 family protein;(source:Araport11)","(RPS30B)","(RPS30B);RIBOSOMAL PROTEIN ES30Y (ES30Y)"]
["AT1G45000","grey","AAA-type ATPase family protein;(source:Araport11)","(RPT4B)","(RPT4B)"]
["AT1G32415","grey","Encodes a PPR protein involved in mitochondrial functioning. Mutants suppress cell wall defects caused by C17 chemical inhibitor. Mutants are defective in cytochrome c maturation and activation of mitochondrial retrograde signalling.","(RRD2)","(RRD2);CELL WALL MAINTAINER 2 (CWM2)"]
["ATMG01390","grey","Mitochondrial 18S ribosomal RNA, which is a component of the 30S small subunit of mitochondrial ribosome. The rRNA is degraded by a polynucleotide phosphorylase-like protein (AtmtPNPase).","(RRN18)","(RRN18)"]
["AT4G36140","grey","Intracellular immune receptor; in a head-to-head configuration with SADR1 similar to the sensor/executor TNL pair RRS1?RPS4, wowever, CRISPR-derived SADR1-P1 loss-of-function allele sadr1-p1-c1 (c.247_332del) did not modify ADR1-L2 DV autoactivity therefore indicating that the genomically paired TNL SADR1 is required for the ADR1-L2 DV activation mimic phenotype.","(SADR1-PAIRED 1)","(SADR1-PAIRED 1)"]
["AT1G22870","grey","One of two paralogs in Arabidopsis.Loss of both SCYL2B and SCYL2A results in severe growth defects.","(SCYL2A)","(SCYL2A)"]
["AT3G21700","grey","Monomeric G protein. Expressed in root epidermal cells that are destined to become atrichoblasts. Also expressed during pollen development and in the pollen tube tip.","(SGP2)","(SGP2)"]
["AT4G22290","grey","Paralog of SHOU4-like. Predicted transmembrane protein.","(SHOU4L2)","(SHOU4L2)"]
["AT2G41980","grey","SINAT1 is an E3 ligase involved in protein ubiquination. Along with MUSE13/14 targets ATG6 ubiquination to regulate autophagosome assembly.","(SINAT1)","(SINAT1)"]
["AT5G53360","grey","RING&#8208;finger E3 ubiquitin ligase (SINATT) member that lacks ubiquitin ligase activity due to the absence of the RING domain, functions as a protector protein which stabilizes FREE1. Involved in response to iron deficiency stress.","(SINAT5)","(SINAT5)"]
["AT3G03970","grey","At3G03970 encodes the plant KASH protein SINE2; SINE2 interacts with SUN1 and SUN2 and is localized at the nuclear envelope.","(SINE2)","(SINE2)"]
["AT1G76630","grey","SKI3 encodes a cytplasmically localized component of the SKI complex which is involved in exosome mediated RNA decay.","(SKI3)","(SKI3);WAX RESTORER (WAR1)"]
["AT3G62840","grey","Small nuclear ribonucleoprotein family protein;(source:Araport11)","(SMD2B)","(SMD2B)"]
["AT2G14285","grey","Small nuclear ribonucleoprotein family protein;(source:Araport11)","(SMFA)","(SMFA)"]
["AT1G51355","grey","SIAMESE-RELATED (SMR) family gene; activated by SMOS1/SCL28 heterodimer thus inhibiting cell cycle progression at G2 and promoting the onset of endoreplication.","(SMR9)","(SMR9)"]
["AT4G02750","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","(SSTPR)","(SSTPR)"]
["AT1G23090","grey","Encodes AST91 mRNA for sulfate transporter.","(SULTR3;3)","(SULTR3;3);SULFATE TRANSPORTER 91 (AST91)"]
["AT5G65300","grey","Gene of unknown function. Expression is induced by a variety of biotic (P. syringae) and abiotic stresses (salt, ABA,IAA, and more.)Member of a small family that includes AT1G35210, AT1G72240, and AT1G22470.Mutants have no obvious loss of function phenotype but overexpressors are early flowering.","(SUPA)","(SUPA)"]
["AT2G35605","grey","SWIB/MDM2 domain superfamily protein;(source:Araport11)","(SWIB6)","(SWIB6)"]
["AT3G04850","grey","Member of the DREAM complex, LIN54 type.","(TCX4)","(TCX4)"]
["AT2G20110","grey","Tesmin/TSO1-like CXC domain-containing protein which is a transcriptional repressor of genes required for maintenance of DNA methylation, including MET1, CMT3, DDM1, KYP and VIMs. Functions redundantly with its paralogue TCX5 in repressing the expression of these genes.","(TCX6)","(TCX6)"]
["AT5G25790","grey","Member of the DREAM complex, LIN54 type.","(TCX7)","(TCX7); (TCX6)"]
["AT5G54770","grey","Encodes a thiamine biosynthetic gene that has a dual function in thiamine biosynthesis and mitochondrial DNA damage tolerance. It appears to be involved in producing the thiazole portion of thiamine (vitamin B1). A crystal structure of the protein reveals that it forms a 2-ring homo-octamer. The mRNA is cell-to-cell mobile.","(THI1)","(THI1);THIAMINE4 (THI4);THIAZOLE REQUIRING (TZ)"]
["AT3G54826","grey","TIM15 homolog.","ZINC RIBBON 3 (ZR3)","(TIM15-2);ZINC RIBBON 3 (ZR3)"]
["AT1G55900","grey","component of a translocase in the mitochondrial inner membrane","(TIM50)","(TIM50);EMBRYO DEFECTIVE 1860 (emb1860)"]
["AT2G02560","grey","Arabidopsis thaliana homolog of human CAND1 (cullin-associated and neddylation-dissociated). Putative similarity to TBP-interacting protein TIP120. Ubiquitously expressed in plant tissues throughout development. T-DNA insertion mutant plants were completely sterile and resistant to sirtinol and auxin, but not to gibberellins or brassinolide. Displayed developmental phenotypes similar to those of axr1, namely, short petioles, downwardly curling leaves, shorter inflorescence. Required for SCF function and appears to modulate SCF complex cycling. Physically interacts with CUL1. The mRNA is cell-to-cell mobile.","CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED (CAND1)","(TIP120);HEMIVENATA (HVE); (ETA2);CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED 1 (ATCAND1);CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED (CAND1)"]
["AT5G35160","grey","Endomembrane protein 70 protein family;(source:Araport11)","(TMN11)","(TMN11)"]
["AT2G47960","grey","Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.","(TRAPPC13)","(TRAPPC13)"]
["AT4G40000","grey","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)","(TRM4A)","(TRM4A); (ATTRM4A)"]
["AT5G16310","grey","Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1;(source:Araport11)","(UCH1)","(UCH1)"]
["AT4G15490","grey","Encodes a protein that might have sinapic acid:UDP-glucose glucosyltransferase activity.","(UGT84A3)","(UGT84A3)"]
["AT5G38650","grey","Proteasome maturation factor UMP1;(source:Araport11)","(UMP1B)","(UMP1B)"]
["AT3G58730","grey","Member of V-ATPase family. Vacuolar-type H + -ATPase (V-ATPase) is a multisubunit proton pump located on the endomembranes.","(VHA-D)","(VHA-D)"]
["AT5G63880","grey","SNF7 family protein;(source:Araport11)","(VPS20.1)","(VPS20.1)"]
["AT5G04920","grey","EAP30/Vps36 family protein;(source:Araport11)","(VPS36)","(VPS36)"]
["AT5G13480","grey","Encodes a protein with similarity to yeast Pfs2p, an mRNA processing factor. Involved in regulation of flowering time; affects FCA mRNA processing. Homozygous mutants are late flowering, null alleles are embryo lethal.","(FY)","(WDR33); (FY)"]
["AT1G62300","grey","Encodes a transcription factor WRKY6. Regulates Phosphate1 (Pho1) expression in response to low phosphate (Pi) stress.","(WRKY6)","(WRKY6); (ATWRKY6)"]
["AT2G04240","grey","Encodes a small protein with an N-terminal trans-membrane domain and a RING-H2 zinc finger motif located at the C-terminus. Gene expression is induced by salt and osmotic stress. Transcrips levels are induced by DELLA proteins and repressed by gibberellic acid. Involved in ABA metabolism.","(XERICO)","(XERICO); (XER)"]
["AT2G38860","grey","Encodes protease I (pfpI)-like protein YLS5; has very low glyoxalase activity.","(YLS5)","(YLS5); (DJ1E); (DJ-1E)"]
["AT4G21160","grey","ADP-ribosylation factor GTPase-activating protein containing zinc finger and C2 domains and a novel PI-3-P-binding protein region. Binds PI-3-P. Highest expression levels in flowering tissue, rosettes and roots. A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.","(ZAC)","(ZAC);ARF-GAP DOMAIN 12 (AGD12)"]
["AT1G10830","grey","Encodes a functional 15-cis-zeta-carotene isomerase (Z-ISO).","15-CIS-ZETA-CAROTENE ISOMERASE (Z-ISO)","(Z-ISO1.1);15-CIS-ZETA-CAROTENE ISOMERASE (Z-ISO)"]
["AT1G22275","grey","One of two nearly identical proteins (ZYP1a) identified by similarity to transverse filament (TF) proteins. These proteins are involved in chromosome synapsis during meiosis I and localize to the synaptonemal complex (SC). ZYP1 recruits PCH2/TRIP3 to the SC, leading to ASY1 removal.Single mutants have reduced fertility and double mutants (induced by RNAi) have severely reduced fertility.","(ZYP1b)","(ZYP1); (ZYP1b)"]
["AT1G76680","grey","Encodes a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. Predicted to be a cytosolic protein.","12-OXOPHYTODIENOATE REDUCTASE 1 (OPR1)","12-OXOPHYTODIENOATE REDUCTASE 1 (OPR1)"]
["AT5G51690","grey","Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity.","1-AMINO-CYCLOPROPANE-1-CARBOXYLATE SYNTHASE 12 (ACS12)","1-AMINO-CYCLOPROPANE-1-CARBOXYLATE SYNTHASE 12 (ACS12)"]
["AT4G11280","grey","encodes a a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family The mRNA is cell-to-cell mobile.","1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID (ACC) SYNTHASE 6 (ACS6)","1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID (ACC) SYNTHASE 6 (ACS6); (ATACS6)"]
["AT3G51260","grey","20S proteosomal alpha subunits. Interacts with SnRK, SKP1/ASK1 during proteasomal binding of an SCF ubiquitin ligase.","20S PROTEASOME ALPHA SUBUNIT PAD1 (PAD1)","20S PROTEASOME ALPHA SUBUNIT PAD1 (PAD1)"]
["AT3G22630","grey","Encodes 20S proteasome beta subunit PBD1 (PBD1).","20S PROTEASOME BETA SUBUNIT D1 (PBD1)","20S PROTEASOME BETA SUBUNIT D1 (PBD1); (PRCGB)"]
["AT2G20580","grey","encoding the RPN subunits of the 26S proteasome The mRNA is cell-to-cell mobile.","26S PROTEASOME REGULATORY SUBUNIT S2 1A (RPN1A)","26S PROTEASOME REGULATORY SUBUNIT S2 1A (ATRPN1A);26S PROTEASOME REGULATORY SUBUNIT S2 1A (RPN1A)"]
["AT1G25450","grey","Encodes KCS5, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","3-KETOACYL-COA SYNTHASE 5 (KCS5)","3-KETOACYL-COA SYNTHASE 5 (KCS5);ECERIFERUM 60 (CER60)"]
["AT3G47730","grey","member of ATH subfamily","ATP-BINDING CASSETTE A2 (ABCA2)","A. THALIANA ABC2 HOMOLOG 1 (ATATH1);ABC2 HOMOLOG 1 (ATH1);ATP-BINDING CASSETTE A2 (ABCA2)"]
["AT3G47780","grey","member of ATH subfamily The mRNA is cell-to-cell mobile.","ATP-BINDING CASSETTE A7 (ABCA7)","A. THALIANA ABC2 HOMOLOG 6 (ATATH6);ABC2 HOMOLOG 6 (ATH6);ATP-BINDING CASSETTE A7 (ABCA7)"]
["AT1G66590","grey","Mitochondrial copper chaperone which influences copper and iron homeostasis.","CYTOCHROME C OXIDASE 19-1 (COX19-1)","A. THALIANA CYTOCHROME C OXIDASE 19-1 (ATCOX19-1);CYTOCHROME C OXIDASE 19 (COX19);CYTOCHROME C OXIDASE 19-1 (COX19-1)"]
["AT1G52500","grey","Encodes one of the splice variants of Arabidopsis thaliana MutM homolog. Encodes a formamidopyrimidine-DNA glycosylase that has abasic lyase activity and is able to nick double- stranded oligonucleotides containing 8-oxo-7,8-dihydroguanine (8-oxoG) in vitro.","MUTM HOMOLOG-1 (MMH-1)","A. THALIANA FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE 1 (ATFPG-1);MUTM HOMOLOG (MMH);MUTM HOMOLOG-1 (MMH-1);MUTM HOMOLOG-1 (ATMMH-1);FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE 1 (FPG-1)"]
["AT3G15660","grey","Mitochondrial glutaredoxin involved in Fe-S cluster assembly. Forms reversible oxidation forms - either as a catalytic intermediate of the oxidoreductase activity and/or as a protective mechanism - preventing irreversible oxidation, allowing Fe-S cluster binding upon reduction.","GLUTAREDOXIN 4 (GRX4)","A. THALIANA GLUTAREDOXIN 4 (ATGRX4);GLUTAREDOXIN 4 (GRX4);GLUTAREDOXIN S15 (GRXS15)"]
["AT1G04635","grey","ribonuclease P family protein / Rpp14 family protein;(source:Araport11)","EMBRYO DEFECTIVE 1687 (EMB1687)","A. THALIANA HOMOLOG OF YEAST POP5 (POP5); (ATPOP5);EMBRYO DEFECTIVE 1687 (EMB1687)"]
["AT4G29830","grey","VIP3 protein is composed of repeats of WD motif which is involved in protein complex formation. The gene is involved in flower timing and flower development. This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase. Loss of gene function leads to a redistribution of H3K4me3 and K3K36me2 modifications within genes but not a change in the overall abundance of these modifications within chromatin. Also known as SKI8, a component of the SKI complex involved in exosome mediated RNA degredation. Member of PAF-C complex.","VERNALIZATION INDEPENDENCE 3 (VIP3)","A. THALIANA HOMOLOG OF YEAST SKI8 (SKI8);VERNALIZATION INDEPENDENCE 3 (VIP3)"]
["AT2G22570","grey","encodes a nicotinamidase that converts nicotinamide into nicotinic acid. As such the encoded enzyme is involved in the pyridine nucleotide salvage pathway which may be connected to the de novo NAD biosynthesis through the ABA signaling pathway.","NICOTINAMIDASE 1 (NIC1)","A. THALIANA NICOTINAMIDASE 1 (ATNIC1); (NIC2);NICOTINAMIDASE 1 (NIC1)"]
["AT4G26080","grey","Involved in abscisic acid (ABA) signal transduction. Negative regulator of ABA promotion of stomatal closure.","ABA INSENSITIVE 1 (ABI1)","ABA INSENSITIVE 1 (ABI1); (AtABI1)"]
["AT4G11690","grey","Encodes ABO8, a pentatricopeptide repeat (PPR) protein responsible for the splicing of NAD4 intron 3 in mitochondrial complex I. Abo8 mutants accumulate more reactive oxygen species (ROS) in root tips than the wild type.","ABA OVERLY SENSITIVE MUTANT (ABO8)","ABA OVERLY SENSITIVE MUTANT (ABO8)"]
["AT3G48510","grey","ABA&#8208;induced transcription repressor that acts as feedback regulator in ABA signalling.","(AITR2)","ABA-INDUCED TRANSCRIPTION REPRESSOR 2 (AITR2); (AITR2);DYNAMIC INFLUENCER OF GENE EXPRESSION 1 (DIG1);SEED DORMANCY FOUR-LIKE 2 (SFL2)"]
["AT5G50360","grey","ABA&#8208;induced transcription repressor that acts as feedback regulator in ABA signalling.","ABA-INDUCED TRANSCRIPTION REPRESSOR 5 (AITR5)","ABA-INDUCED TRANSCRIPTION REPRESSOR 5 (AITR5);SDR4 LIKE4 (SLF4);DYNAMIC INFLUENCER OF GENE EXPRESSION 2 (DIG2)"]
["AT4G31390","grey","Protein kinase superfamily protein;(source:Araport11)","ABC1-LIKE KINASE RELATED TO CHLOROPHYLL DEGRADATION AND OXIDATIVE STRESS 1 (ACDO1)","ABC1-LIKE KINASE RELATED TO CHLOROPHYLL DEGRADATION AND OXIDATIVE STRESS 1 (ACDO1); (ATACDO1);ABC1-LIKE KINASE 1 (ABC1K1);PROTON GRADIENT REGULATION 6 (PGR6)"]
["AT1G69260","grey","ABI five binding protein;(source:Araport11)","ABI FIVE BINDING PROTEIN (AFP1)","ABI FIVE BINDING PROTEIN (AFP1)"]
["AT3G29575","grey","ABI five binding protein 3;(source:Araport11)","ABI FIVE BINDING PROTEIN 3 (AFP3)","ABI FIVE BINDING PROTEIN 3 (AFP3)"]
["AT5G17640","grey","Expression of this gene is induced by abscisic acid and salt stress.","ABIOTIC STRESS GENE 1 (ASG1)","ABIOTIC STRESS GENE 1 (ASG1)"]
["AT1G62960","grey","Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity.","ACC SYNTHASE 10 (ACS10)","ACC SYNTHASE 10 (ACS10)"]
["AT5G38660","grey","mutant has Altered acclimation responses;","ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT (APE1)","ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT (APE1)"]
["AT1G75010","grey","Encodes ARC3 (Accumulation and Replication of Chloroplast 3), a chloroplast division factor functioning in the initiation of chloroplast division. ARC3 is a chimera of the prokaryotic FtsZ and part of the eukaryotic phosphatidylinositol-4-phosphate 5-kinase (PIP5K). Located on the outer surface of the chloroplast in a ring-like structure at the early stage of chloroplast division. The arc3 mutant has a small number of abnormally large chloroplasts in the cell.","ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 (ARC3)","ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 (ARC3)"]
["AT1G36160","grey","Encodes acetyl-CoA carboxylase. Mutant displays uncoordinated cell divisions which are enhanced by cytokinins. Mutant also has aberrant organization of the apical region in the embryo and abnormal root and shoot development and is deficient in freezing tolerance after cold acclimation. Essential for very long chain fatty acid elongation. The mRNA is cell-to-cell mobile.","ACETYL-COA CARBOXYLASE 1 (ACC1)","ACETYL-COA CARBOXYLASE 1 (ACC1);SENSITIVE TO FREEZING 3 (SFR3); (AT-ACC1);EMBRYO DEFECTIVE 22 (EMB22);GURKE (GK);PASTICCINO 3 (PAS3);GLOSSYHEAD 1 (GSD1); (115D-4A)"]
["AT1G36180","grey","acetyl-CoA carboxylase 2 (ACC2) The mRNA is cell-to-cell mobile.","ACETYL-COA CARBOXYLASE 2 (ACC2)","ACETYL-COA CARBOXYLASE 2 (ACC2)"]
["AT4G35830","grey","Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. This enzyme can also specifically bind to the 5' UTR of CSD2 in vitro.","ACONITASE 1 (ACO1)","ACONITASE 1 (ACO1); (RTD3)"]
["AT4G26970","grey","Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. The mRNA is cell-to-cell mobile.","ACONITASE 2 (ACO2)","ACONITASE 2 (ACO2)"]
["AT5G09810","grey","Member of Actin gene family.Mutants are defective in germination and root growth. The mRNA is cell-to-cell mobile.","ACTIN 7 (ACT7)","ACTIN 2 (ACT2); (ATACT7);ACTIN 7 (ACT7)"]
["AT3G27000","grey","encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. its transcript level is down regulated by light and is expressed in very low levels in all organs examined.","ACTIN RELATED PROTEIN 2 (ARP2)","ACTIN RELATED PROTEIN 2 (ATARP2);ACTIN RELATED PROTEIN 2 (ARP2);WURM (WRM)"]
["AT3G33520","grey","Encodes ACTIN-RELATED PROTEIN6 (ARP6), a putative component of a chromatin-remodeling complex. Required for both histone acetylation and methylation of the FLC chromatin in Arabidopsis. Along with PIE1 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6). Incorporation of this variant histone into chromatin mediates the ambient temperature response. Located at specific regions of the nuclear periphery. Expression throughout plants shown by in-situ and immunolocalization methods. Mutants show defects in fertility, leaf, flower and inflorescence development and shorter flowering times. ARP6 also is involved in globally controlling developmental responses to ambient temperature through incorporation of variant histone H2A.Z into chromatin.","ACTIN-RELATED PROTEIN 6 (ARP6)","ACTIN-RELATED PROTEIN 6 (ATARP6);ACTIN-RELATED PROTEIN 6 (ARP6);SUPPRESSOR OF FRI 3 (SUF3);EARLY IN SHORT DAYS 1 (ESD1)"]
["AT3G60830","grey","Encodes an actin-related protein required for normal embryogenesis, plant architecture and floral organ abscission. Identified as a subunit shared by BRM-, SYD-, and MINU1/2-associated SWI/SNF chromatin remodeling complexes (PMID:36471048).","ACTIN-RELATED PROTEIN 7 (ARP7)","ACTIN-RELATED PROTEIN 7 (ATARP7); (ARP7);ACTIN-RELATED PROTEIN 7 (ARP7)"]
["AT5G43500","grey","encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes.","ACTIN-RELATED PROTEIN 9 (ARP9)","ACTIN-RELATED PROTEIN 9 (ARP9);ACTIN-RELATED PROTEIN 9 (ATARP9)"]
["AT1G60430","grey","actin-related protein C3;(source:Araport11)","ACTIN-RELATED PROTEIN C3 (ARPC3)","ACTIN-RELATED PROTEIN C3 (ARPC3)"]
["AT2G35690","grey","Encodes an acyl-CoA oxidase. Involved in jasmonate biosynthesis. Expressed uniformly in seedlings and throughout development.","ACYL-COA OXIDASE 5 (ACX5)","ACYL-COA OXIDASE 5 (ACX5)"]
["AT5G11490","grey","Encodes a component of the AP4 complex and is involved in vacuolar sorting of storage proteins.","ADAPTOR PROTEIN COMPLEX PROTEIN 4B (AP4B)","ADAPTOR PROTEIN COMPLEX PROTEIN 4B (AP4B); (GFS4)"]
["AT5G46630","grey","clathrin adaptor complexes medium subunit family protein, contains Pfam profile: PF00928 adaptor complexes medium subunit family; similar to micro-adaptins of clathrin coated vesicle adaptor complexes. Phosphorylated on Thr-163 by AAK1, resulting in regulation of tropic growth of roots.","ADAPTOR PROTEIN-2 MU-ADAPTIN (AP2M)","ADAPTOR PROTEIN-2 MU-ADAPTIN (AP2M)"]
["AT4G24550","grey","Encodes a component of the AP4 complex and is involved in vacuolar sorting of storage proteins.","ADAPTOR PROTEIN-4 MU-ADAPTIN (AP4M)","ADAPTOR PROTEIN-4 MU-ADAPTIN (AP4M)"]
["AT3G03900","grey","Provides activated sulfate for the sulfation of secondary metabolites, including the glucosinolates. Redundant with APK4.","ADENOSINE-5'-PHOSPHOSULFATE (APS) KINASE 3 (APK3)","ADENOSINE-5'-PHOSPHOSULFATE (APS) KINASE 3 (APK3)"]
["AT5G60340","grey","Encodes a nuclear adenylate kinase that interacts with a putative homolog of Rps14, AtRPS14-1 and affects the elongation of cells in the stem.","ARABIDOPSIS ADENYLATE KINASE 6 (AAK6)","ADENYLATE KINASE 6 (AK6);ARABIDOPSIS ADENYLATE KINASE 6 (AAK6)"]
["AT3G22950","grey","A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor GB:P91924 (Dugesia japonica), other ARFs and ARF-like proteins.","ADP-RIBOSYLATION FACTOR C1 (ARFC1)","ADP-RIBOSYLATION FACTOR C1 (ATARFC1);ADP-RIBOSYLATION FACTOR C1 (ARFC1);MODIFIED TRANSPORT TO THE VACUOLE 8 (MTV8);ADP-RIBOSYLATION FACTOR LIKE 5 (ARL5)"]
["AT5G60440","grey","AGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.","AGAMOUS-LIKE 62 (AGL62)","AGAMOUS-LIKE 62 (AGL62)"]
["AT3G12690","grey","Encodes a putative serine/threonine kinase It is expressed specifically in pollen and appears to function redundantly with AGC1.7 to regulate polarized growth of pollen tubes.","AGC KINASE 1.5 (AGC1.5)","AGC KINASE 1.5 (AGC1.5)"]
["AT5G55910","grey","Member of AGC VIIIa Kinase family. D6PK is a protein kinase involved that plays a role in polar auxin transport. Most likely acts redundantly with the related proteins: D6PKL1,D6PKL2,and D6PKL3. PIN1 is a target of D6PK phosphorylation. D6PK is associated with sterol enriched membrane rafts and may be involved in regulation of the switch from basal to planar polarity during root hair initiation. Involved in pulse-induced phototropism but also for time-dependent second positive phototropism. Works with PIN3 in the same genetic pathway of hypocotyl phototropism under all light conditions. Involved in the generation of auxin asymmetrical distribution induced by phototropic stimulation.","D6 PROTEIN KINASE (D6PK)","AGC VIIIA KINASE 1-1 (AGC1-1);D6 PROTEIN KINASE (D6PK)"]
["AT2G17580","grey","Encodes a bacterial-type poly(A) polymerase, AGS1.","AHG2-1 SUPPRESSOR 1 (AGS1)","AHG2-1 SUPPRESSOR 1 (AGS1)"]
["AT5G57390","grey","Encodes a member of the AP2 family of transcriptional regulators. May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.essential for the developmental transition between the embryonic and vegetative phases in plants. Overexpression results in the formation of somatic embryos on cotyledons. It is also required to maintain high levels of PIN1 expression at the periphery of the meristem and modulate local auxin production in the central region of the SAM which underlies phyllotactic transitions. Acts redundantly with PLT3 and 7 in lateral root pattern formation.","AINTEGUMENTA-LIKE 5 (AIL5)","AINTEGUMENTA-LIKE 5 (AIL5);PLETHORA 5 (PLT5);EMBRYOMAKER (EMK);CHOTTO 1 (CHO1)"]
["AT1G23800","grey","Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product.","ALDEHYDE DEHYDROGENASE 2B7 (ALDH2B7)","ALDEHYDE DEHYDROGENASE 2B7 (ALDH2B7);ALDEHYDE DEHYDROGENASE 2B (ALDH2B)"]
["AT3G24503","grey","Arabidopsis thaliana aldehyde dehydrogenase AtALDH1a mRNA. a sinapaldehyde dehydrogenase catalyzes both the oxidation of coniferylaldehyde and sinapaldehyde forming ferulic acid and sinapic acid, respectively","ALDEHYDE DEHYDROGENASE 2C4 (ALDH2C4)","ALDEHYDE DEHYDROGENASE 2C4 (ALDH2C4);REDUCED EPIDERMAL FLUORESCENCE1 (REF1);ALDEHYDE DEHYDROGENASE 1A (ALDH1A)"]
["AT1G79440","grey","Encodes a mitochondrial succinic semialdehyde dehydrogenase (SSADH). Nomenclature according to Kirch, et al (2004).","ALDEHYDE DEHYDROGENASE 5F1 (ALDH5F1)","ALDEHYDE DEHYDROGENASE 5F1 (ALDH5F1);ENLARGED FIL EXPRESSION DOMAIN 1 (ENF1);SUCCINIC SEMIALDEHYDE DEHYDROGENASE (SSADH);SUCCINIC SEMIALDEHYDE DEHYDROGENASE 1 (SSADH1)"]
["AT1G54100","grey","Aldehyde dehydrogenase","ALDEHYDE DEHYDROGENASE 7B4 (ALDH7B4)","ALDEHYDE DEHYDROGENASE 7B4 (ALDH7B4)"]
["AT3G25780","grey","Encodes allene oxide cyclase, one of the enzymes involved in jasmonic acid biosynthesis. One of four genes in Arabidopsis that encode this enzyme. mRNA expression is upregulated in senescing leaves. Note: Nomenclature for Arabidopsis allene oxide cyclase 3 (AOC3, AT3G25780) gene is based on Stenzel et al. 2003 Plant Molecular Biology 51:895-911. AOC3 (AT3G25780) is also referred to as AOC2 in He et al. 2002 Plant Physiology, 128:876-884. The mRNA is cell-to-cell mobile.","ALLENE OXIDE CYCLASE 3 (AOC3)","ALLENE OXIDE CYCLASE 3 (AOC3)"]
["AT1G18460","grey","Alpha/beta hydrolase","ALPHA/BETA-HYDROLASE (alpha/beta-HYD)","ALPHA/BETA-HYDROLASE (alpha/beta-HYD); (LIDL1)"]
["AT1G64740","grey","alpha-tubulin expressed primarily in stamens and mature pollen","ALPHA-1 TUBULIN (TUA1)","ALPHA-1 TUBULIN (TUA1)"]
["AT5G22770","grey","AP-2 complex subunit alpha-1. Part of endomembrane trafficking system.","ALPHA-ADAPTIN (alpha-ADR)","ALPHA-ADAPTIN (AP2A1);ALPHA-ADAPTIN (alpha-ADR)"]
["AT5G39040","grey","Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration.","ATP-BINDING CASSETTE B27 (ABCB27)","ALUMINUM SENSITIVE 1 (ALS1); (ATALS1);TRANSPORTER ASSOCIATED WITH ANTIGEN PROCESSING PROTEIN 2 (TAP2);ATP-BINDING CASSETTE B27 (ABCB27);ARABIDOPSIS THALIANA TRANSPORTER ASSOCIATED WITH ANTIGEN PROCESSING PROTEIN 2 (ATTAP2)"]
["AT3G18440","grey","Belongs to the aluminum-activated malate transporter family. Encodes a vacuolar malate channel. Expressed in all parts of plants. Almost exclusively expressed in mesophyll cells of leaves. The mRNA is cell-to-cell mobile.","ALUMINUM-ACTIVATED MALATE TRANSPORTER 9 (ALMT9)","ALUMINUM-ACTIVATED MALATE TRANSPORTER 9 (AtALMT9);ALUMINUM-ACTIVATED MALATE TRANSPORTER 9 (ALMT9)"]
["AT1G13560","grey","Encodes aminoalcoholphosphotransferase AAPT1.","AMINOALCOHOLPHOSPHOTRANSFERASE 1 (AAPT1)","AMINOALCOHOLPHOSPHOTRANSFERASE 1 (AAPT1); (ATAAPT1)"]
["AT1G59820","grey","Encodes a phospholipid translocase. Involved in secretory vesicle formation from trans-Golgi in peripheral columella cells at the root tip and pollen tube. Mutants have slow growth,m short primary roots and slow growing pollen tubes.The mRNA is cell-to-cell mobile.ALA3 genetically and physically interacts with ARF GEFs GNOM (At1g13980) and BIG3 (At1g01960) in regulating PIN trafficking and polarity. It also helps establish the polar localization of apical phosphatidylserine (PS) in pollen tubes, in turn regulating pollen tube growth and guidance.","AMINOPHOSPHOLIPID ATPASE 3 (ALA3)","AMINOPHOSPHOLIPID ATPASE 3 (ALA3)"]
["AT2G18290","grey","Encodes APC10 (anaphase promoting complex 10). Overexpression of APC10 likely mimics auxin and ethylene sensitive phenotypes. Plays an essential role in cell proliferation during leaf development.","ANAPHASE PROMOTING COMPLEX 10 (APC10)","ANAPHASE PROMOTING COMPLEX 10 (APC10);EMBRYO DEFECTIVE 2783 (EMB2783); (ATAPC10)"]
["AT1G73177","grey","The BONSAI gene encodes a protein with similarity to the APC13 component of the Anaphase Promoting Complex. Plants with lowered level of BONSAI expression, resulting from hypomethylation, RNAi knock-down, or a T-DNA insertion show some abnormalities in shoot and inflorescence development.","BONSAI (BNS)","ANAPHASE-PROMOTING COMPLEX 13 (APC13);BONSAI (BNS)"]
["AT3G05870","grey","Subunit of the anaphase promoting complex, a ubiquitin ligase complex that regulates progression through the cell cycle.","ANAPHASE-PROMOTING COMPLEX/CYCLOSOME 11 (APC11)","ANAPHASE-PROMOTING COMPLEX/CYCLOSOME 11 (APC11);ZYGOTE -ARREST 1 (ZGY1); (ZYG1)"]
["AT1G25220","grey","Catalyzes the first step of tryptophan biosynthesis: Chorismate L-Glutamine = Anthranilate Pyruvate L-Glutamate. Functions as a heterocomplex with anthranilate synthase alpha subunit (ASA1 or ASA2).","ANTHRANILATE SYNTHASE BETA SUBUNIT 1 (ASB1)","ANTHRANILATE SYNTHASE BETA SUBUNIT 1 (ASB1)"]
["AT3G28970","grey","Identified in a screen for mutants resistant to an anti-auxin. Encodes a protein with unknown function that shares homology with DCN protein family.","ANTIAUXIN-RESISTANT 3 (AAR3)","ANTIAUXIN-RESISTANT 3 (AAR3)"]
["ATMG00220","grey","Mitochondrial apocytochrome b (cob) gene encodes a subunit of the ubiquinol-cytochrome c oxidoreductase and is part of a 5 kb transcript. The transcript also contains a pseudogene for ribosomal protein S14 called RPS15 and a tRNA(Ser) gene. Both the Cob and RPS15 genes are edited in the transcript.","APOCYTOCHROME B (COB)","APOCYTOCHROME B (COB)"]
["AT3G03860","grey","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group. The mRNA is cell-to-cell mobile.","APR-LIKE 5 (APRL5)","APR-LIKE 5 (APRL5);APR-LIKE 5 (ATAPRL5)"]
["AT2G14750","grey","Encodes adenosine-5'-phosphosulfate kinase. Provides activated sulfate for sulfation of secondary metabolites, including the glucosinolates. Essential for pollen viability. The mRNA is cell-to-cell mobile.","APS KINASE (APK)","APS KINASE (APK);APS KINASE 1 (AKN1); (ATAKN1);ADENOSINE-5'-PHOSPHOSULFATE (APS) KINASE 1 (APK1)"]
["AT4G04610","grey","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group. The mRNA is cell-to-cell mobile.","APS REDUCTASE 1 (APR1)","APS REDUCTASE 1 (APR1); (APR);PAPS REDUCTASE HOMOLOG 19 (PRH19); (ATAPR1)"]
["AT4G38220","grey","Peptidase M20/M25/M40 family protein;(source:Araport11)","AQUAPORIN INTERACTOR (AQI)","AQUAPORIN INTERACTOR (AQI)"]
["AT5G28640","grey","Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors.Identified as a subunit shared by BRM- and SYD-associated SWI/SNF complexes (PMID:36471048).","ANGUSTIFOLIA 3 (AN3)","ARABIDOPSIS GRF1-INTERACTING FACTOR 1 (ATGIF1);GRF1-INTERACTING FACTOR 1 (GIF1);GRF1-INTERACTING FACTOR (GIF);ANGUSTIFOLIA 3 (AN3)"]
["AT4G27940","grey","Involved in Mn and Fe homeostasis, root length, and flowering time.","MANGANESE TRACKING FACTOR FOR MITOCHONDRIAL SOD2 (MTM1)","ARABIDOPSIS MANGANESE TRACKING FACTOR FOR MITOCHONDRIAL SOD2 (ATMTM1);MANGANESE TRACKING FACTOR FOR MITOCHONDRIAL SOD2 (MTM1)"]
["AT4G38520","grey","Plasma membrane-associated protein phosphatase inhibited by SAUR3, thereby increasing the plasma membrane electrochemical potential, acidifying the apoplast, and stimulating cell expansion.","ARABIDOPSIS PP2C CLADE D 6 (APD6)","ARABIDOPSIS PP2C CLADE D 6 (APD6);PROTEIN PHOSPHATASE 2C.D5 (PP2C.D5)"]
["AT5G66080","grey","Type 2C protein phosphatase located in the plasma membrane. Functions in heat shock response memory maintenance. Inhibits SALT OVERLY SENSITIVE 1 Na+/H+ antiporter activity under non-salt-stress conditions.","ARABIDOPSIS PP2C CLADE D 9 (APD9)","ARABIDOPSIS PP2C CLADE D 9 (APD9); (PP2C.D7);FORGETTER2 (FGT2)"]
["AT3G59520","grey","RHOMBOID-like protein 13;(source:Araport11)","RHOMBOID-LIKE PROTEIN 13 (RBL13)","ARABIDOPSIS RHOMBOID-LIKE PROTEIN 12 (ATRBL12);RHOMBOID-LIKE PROTEIN 12 (RBL12);RHOMBOID-LIKE PROTEIN 13 (ATRBL13);RHOMBOID-LIKE PROTEIN 13 (RBL13)"]
["AT1G10940","grey","Encodes a plant protein kinase similar to the calcium/calmodulin-dependent protein kinase subfamily and the SNF1 kinase subfamily (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Kinase activity of its homolog in tobacco is induced by hyperosmotic condition within 1 minute. Phosphatidylinositol 4-phosphate 5-kinase (PIP5K) enzyme family member.","SNF1-RELATED PROTEIN KINASE 2.4 (SNRK2.4)","ARABIDOPSIS SERINE/THREONINE KINASE 1 (ASK1); (SRK2A);SNF1-RELATED PROTEIN KINASE 2.4 (SNRK2.4);SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-4 (SNRK2-4)"]
["AT5G51300","grey","Encodes a nuclear localized splicing factor homolog that is involved in alternative splicing of some mRNAs.","ARABIDOPSIS SF1 HOMOLOG (ATSF1)","ARABIDOPSIS SF1 HOMOLOG (ATSF1); (ATKH27); (SOT4);SPLICING FACTOR 1 (SF1)"]
["AT3G24860","grey","Trihelix transcription factor induced by osmotic and salt stress. Binds to a conserved AGAG-box sequence in the promoter of genes it regulates. Regulates the expression of stress tolerance genes, resulting in reduced reactive oxygen species, Na+ accumulation, stomatal apertures, lipid peroxidation, cell death and water loss rate, and increased proline content and reactive oxygen species scavenging capability.","ARABIDOPSIS SIP1 CLADE TRIHELIX1 (AST1)","ARABIDOPSIS SIP1 CLADE TRIHELIX1 (AST1)"]
["AT1G23980","grey","RING/U-box superfamily protein;(source:Araport11)","ARABIDOPSIS T??XICOS EN LEVADURA 47 (ATL47)","ARABIDOPSIS T??XICOS EN LEVADURA 47 (ATL47)"]
["AT1G33480","grey","RING/U-box superfamily protein;(source:Araport11)","ARABIDOPSIS T??XICOS EN LEVADURA 58 (ATL58)","ARABIDOPSIS T??XICOS EN LEVADURA 58 (ATL58)"]
["AT3G54620","grey","bZIP transcription factor-like protein mRNA","BASIC LEUCINE ZIPPER 25 (BZIP25)","ARABIDOPSIS THALIANA BASIC LEUCINE ZIPPER 25 (AtbZIP25);BASIC LEUCINE ZIPPER 25 (BZIP25);BASIC LEUCINE ZIPPER O2 HOMOLOG 4 (BZO2H4)"]
["AT1G76080","grey","Encodes a thioredoxin like protein. Localizes to the chloroplast and is redistributed to the chloroplast envelope under heat stress. It is involved in non host resistance and thermotolerance.","CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD (CDSP32)","ARABIDOPSIS THALIANA CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD (ATCDSP32);TRX-LIKE 1 (TRXL1);CHLOROPLASTIC DROUGHT-INDUCED STRESS PROTEIN OF 32 KD (CDSP32)"]
["AT2G32950","grey","Represses photomorphogenesis and induces skotomorphogenesis in the dark. Contains a ring finger zinc-binding motif, a coiled-coil domain, and several WD-40 repeats, similar to G-beta proteins. The C-terminus has homology to TAFII80, a subunit of the TFIID component of the RNA polymerase II of Drosophila. Nuclear localization in the dark and cytoplasmic in the light. The mRNA is cell-to-cell mobile.","CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1)","ARABIDOPSIS THALIANA CONSTITUTIVE PHOTOMORPHOGENIC 1 (ATCOP1);EMBRYO DEFECTIVE 168 (EMB168);DEETIOLATED MUTANT 340 (DET340);FUSCA 1 (FUS1);CONSTITUTIVE PHOTOMORPHOGENIC 1 (COP1)"]
["AT1G69670","grey","cullin, putative, contains similarity to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with members of AtBPM family and RBX1 suggesting it is part of an E3 ligase complex involved in RUB modification.","CULLIN 3B (CUL3B)","ARABIDOPSIS THALIANA CULLIN 3B (ATCUL3B);CULLIN 3B (CUL3B)"]
["AT1G20760","grey","EH domain containing protein.","ARABIDOPSIS THALIANA EH DOMAIN CONTAINING PROTEIN 1 (ATEH1)","ARABIDOPSIS THALIANA EH DOMAIN CONTAINING PROTEIN 1 (ATEH1)"]
["AT4G00730","grey","Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development. Loss of function mutants have increased cell wall polysaccharide content.","ANTHOCYANINLESS 2 (ANL2)","ARABIDOPSIS THALIANA HOMEODOMAIN PROTEIN (AHDP);ANTHOCYANINLESS 2 (ANL2)"]
["AT5G61760","grey","Encodes an inositol polyphosphate 3-/6-/5-kinase that is localized to the nucleus. Able to complement a mutation in a yeast transcriptional regulator gene (ARG82/IPK2). Acts redundantly with ATIPK2alpha during pollen development, pollen tube guidance and embryogenesis.","INOSITOL POLYPHOSPHATE KINASE 2 BETA (IPK2BETA)","ARABIDOPSIS THALIANA INOSITOL POLYPHOSPHATE KINASE 2 BETA (ATIPK2BETA);INOSITOL POLYPHOSPHATE KINASE 2 BETA (IPK2BETA);INOSITOL POLYPHOSPHATE KINASE 2 BETA (IPK2B)"]
["AT5G20410","grey","Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues. Does not contribute to galactolipid synthesis under Pi-sufficient conditions but does under Pi starvation.","MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 2 (MGD2)","ARABIDOPSIS THALIANA MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 2 (ATMGD2);MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 2 (MGD2)"]
["AT4G09140","grey","Encodes a protein with similarity to Mut1 DNA mismatch repair protein, from E.coli. The protein is expressed during prophase I of meiosis, colocalizes with MLH3 throughout pachytene and is dependent on MLH3 for proper localization.","MUTL-HOMOLOGUE 1 (MLH1)","ARABIDOPSIS THALIANA MUTL-HOMOLOGUE 1 (ATMLH1);MUTL-HOMOLOGUE 1 (MLH1)"]
["AT5G64410","grey","oligopeptide transporter","OLIGOPEPTIDE TRANSPORTER 4 (OPT4)","ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 4 (ATOPT4);OLIGOPEPTIDE TRANSPORTER 4 (OPT4)"]
["AT4G35790","grey","Encodes a protein with phospholipase D activity. Involved in phospolipase metabolism. Mutants are affected in hydrogen peroxide mediated cell death.","PHOSPHOLIPASE D DELTA (PLDDELTA)","ARABIDOPSIS THALIANA PHOSPHOLIPASE D DELTA (ATPLDDELTA);PHOSPHOLIPASE D DELTA (PLDDELTA)"]
["AT5G62880","grey","ROP (Rho of plant GTPases) family member involved in cell wall patterning. Locally activated to form plasma membrane domains, which direct formation of cell wall pits in metaxylem vessel cells through interaction with cortical microtubules. Pattern formation of cell wall pits is governed by ROP activation via a reaction-difusion mechanism. Patterning involves active ROP1 recruiting BDR1 to the plasma membrane in pit regions. BRD1 in turn recruits the actin binding protein WAL.","RAC-LIKE 10 (RAC10)","ARABIDOPSIS THALIANA RAC-LIKE 10 (ATRAC10);RAC-LIKE 10 (RAC10);RHO-RELATED PROTEIN FROM PLANTS 11 (ATROP11);RAC-LIKE 10 (ARAC10);RHO-RELATED PROTEIN FROM PLANTS 11 (ROP11)"]
["AT1G02130","grey","Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation.","RAS 5 (RA-5)","ARABIDOPSIS THALIANA RESPONSIVE TO ABSCISIC ACID 1B (ATRAB1B);ARABIDOPSIS RAS 5 (ARA5);RAS 5 (RA-5);RAS 5 (ARA-5);ARABIDOPSIS THALIANA RAB D2A (ATRABD2A);RAB D2A (RABD2A)"]
["AT4G16120","grey","Putative cobra like membrane-anchored cell wall protein. Acts redundantly with COBL9 to regulate root hair tip growth.","COBRA-LIKE PROTEIN-7 PRECURSOR (COBL7)","ARABIDOPSIS THALIANA SEC61 BETA 1 (ATSEB1);COBRA-LIKE PROTEIN-7 PRECURSOR (COBL7);SEC61 BETA 1 (SEB1)"]
["AT1G05820","grey","SIGNAL PEPTIDE PEPTIDASE-LIKE 5;(source:Araport11)","SIGNAL PEPTIDE PEPTIDASE-LIKE 5 (SPPL5)","ARABIDOPSIS THALIANA SIGNAL PEPTIDE PEPTIDASE-LIKE 5 (ATSPPL5);SIGNAL PEPTIDE PEPTIDASE-LIKE 5 (SPPL5)"]
["AT5G06140","grey","Homolog of yeast retromer subunit VPS5. Part of a retromer-like protein complex involved in endosome to lysosome protein transport. In roots it co-localizes with the PIN2 auxin efflux carrier. Involved in endocytic sorting of membrane proteins including PIN2, BOR1 and BRI1.","SORTING NEXIN 1 (SNX1)","ARABIDOPSIS THALIANA SORTING NEXIN 1 (ATSNX1);SORTING NEXIN 1 (SNX1)"]
["AT4G12640","grey","Encodes a member of the Split ends (Spen) protein family that is characterized by an N-terminal domain, with one or more RNA recognition motifs and a SPOC domain. Knockout and overexpression mutants show no apparent changes in growth, development and flowering time under standard growth conditions.","ARABIDOPSIS THALIANA SPLIT ENDS 2 (ATSPEN2)","ARABIDOPSIS THALIANA SPLIT ENDS 2 (ATSPEN2)"]
["AT4G22755","grey","Encodes a member of the SMO1 family of sterol 4alpha-methyl oxidases. In general, the expression of SMO1-3 is weaker than SMO1-1 and SMO1-2 suggesting that the three SMO1 genes play redundant as well as specific roles in embryo and root development with SMO1-3 playing a less important role than SMO1-1 and SMO1-2.","STEROL 4-ALPHA METHYL OXIDASE 1-3 (SMO1-3)","ARABIDOPSIS THALIANA STEROL 4-ALPHA-METHYL OXIDASE 1 (ATSMO1); (ATSMO1-3);STEROL 4-ALPHA METHYL OXIDASE 1-3 (SMO1-3)"]
["AT5G07880","grey","member of mammalian SNAP25 Gene Family, a type of SNARE proteins with two chains. There are three members in Arabidopsis: SNAP30, SNAP29, and SNAP33.","SYNAPTOSOMAL-ASSOCIATED PROTEIN SNAP25-LIKE 29 (SNAP29)","ARABIDOPSIS THALIANA SYNAPTOSOMAL-ASSOCIATED PROTEIN SNAP25-LIKE 29 (ATSNAP29);SYNAPTOSOMAL-ASSOCIATED PROTEIN SNAP25-LIKE 29 (SNAP29)"]
["AT3G16620","grey","component of TOC complex, plastid protein import machinery.","TRANSLOCON OUTER COMPLEX PROTEIN 120 (TOC120)","ARABIDOPSIS THALIANA TRANSLOCON OUTER COMPLEX PROTEIN 120 (ATTOC120);TRANSLOCON OUTER COMPLEX PROTEIN 120 (TOC120)"]
["AT1G04360","grey","RING/U-box superfamily protein;(source:Araport11)","ARABIDOPSIS TOXICOS EN LEVADURA 1 (ATL1)","ARABIDOPSIS TOXICOS EN LEVADURA 1 (ATL1)"]
["AT4G30370","grey","RING/U-box superfamily protein;(source:Araport11)","IRT1 DEGRADATION FACTOR 1 (IDF1)","ARABIDOPSIS TOXICOS EN LEVADURA 14 (ATL14);IRT1 DEGRADATION FACTOR 1 (IDF1)"]
["AT3G16720","grey","RING-H2 protein induced after exposure to chitin or inactivated crude cellulase preparations. The mRNA is cell-to-cell mobile.","ARABIDOPSIS TOXICOS EN LEVADURA 2 (ATL2)","ARABIDOPSIS TOXICOS EN LEVADURA 2 (ATL2);TOXICOS EN LEVADURA 2 (TL2)"]
["AT4G27910","grey","Encodes a SET domain containing protein, putative H3K4 methyltransferase. Involved in bolting/flowering time together with ATX1 and ATX3.","SET DOMAIN PROTEIN 16 (SDG16)","ARABIDOPSIS TRITHORAX 4 (ATX4);SET DOMAIN PROTEIN 16 (SDG16)"]
["AT3G01700","grey","Encodes an arabinogalactan protein that is expressed in pollen, pollen sac and pollen tube. Loss of AGP11 function results in decreased fertility due to defects in pollen tube growth.","ARABINOGALACTAN PROTEIN 11 (AGP11)","ARABINOGALACTAN PROTEIN 11 (AGP11);ARABINOGALACTAN PROTEIN 11 (AtAGP11)"]
["AT2G22470","grey","Encodes arabinogalactan-protein (AGP2).","ARABINOGALACTAN PROTEIN 2 (AGP2)","ARABINOGALACTAN PROTEIN 2 (AGP2); (ATAGP2)"]
["AT5G65390","grey","arabinogalactan protein 7;(source:Araport11)","ARABINOGALACTAN PROTEIN 7 (AGP7)","ARABINOGALACTAN PROTEIN 7 (AGP7)"]
["AT5G61980","grey","A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD1 belongs to the class 1, together with AGD2, AGD3 and AGD4. Not expressed in hypocotyls and cotyledons.","ARF-GAP DOMAIN 1 (AGD1)","ARF-GAP DOMAIN 1 (AGD1);VAN3-LIKE PROTEIN1 (VAL1)"]
["AT5G46750","grey","A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. The mRNA is cell-to-cell mobile.","ARF-GAP DOMAIN 9 (AGD9)","ARF-GAP DOMAIN 9 (AGD9);ARF-GAP DOMAIN 8 (AGD8)"]
["AT1G24120","grey","encodes a DnaJ-like protein similar to ARG1 and ARL2 that are both involved in root and hypocotyl gravitropism response. However, null mutation in this gene does not result in defects in gravitropism. Gene is expressed in all tissues examined.","ARG1-LIKE 1 (ARL1)","ARG1-LIKE 1 (ARL1)"]
["AT2G46610","grey","Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926.","ARGININE/SERINE-RICH SPLICING FACTOR 31A (RS31a)","ARGININE/SERINE-RICH SPLICING FACTOR 31A (RS31a);ARGININE/SERINE-RICH SPLICING FACTOR 31A (At-RS31a)"]
["AT2G44080","grey","Encodes ARL, a gene similar to ARGOS involved in cell expansion-dependent organ growth. Upregulated by brassinosteroid. Acts downstream of BRI1. The mRNA is cell-to-cell mobile.","ARGOS-LIKE (ARL)","ARGOS-LIKE (ARL)"]
["AT2G17380","grey","Encodes clathrin assembly protein AP19. The mRNA is cell-to-cell mobile.","ASSOCIATED PROTEIN 19 (AP19)","ASSOCIATED PROTEIN 19 (AP19)"]
["AT4G00355","grey","Encodes an Atg8-interacting protein that is partially associated with the ER during favorable growth conditions and becomes mainly associated with a spherical compartment that dynamically moves along the ER network.","ATG8-INTERACTING PROTEIN 2 (ATI2)","ATG8-INTERACTING PROTEIN 2 (ATI2)"]
["AT4G25320","grey","AT hook motif DNA-binding family protein;(source:Araport11)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 3 (AHL3)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 3 (AHL3)"]
["AT5G51590","grey","Member of the 29 AT-hook family TFs involved in the development of root xylem.","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 4 (AHL4)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 4 (AHL4)"]
["AT5G46640","grey","AT hook motif DNA-binding family protein;(source:Araport11)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 8 (AHL8)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 8 (AHL8)"]
["AT3G04570","grey","AT-hook motif nuclear-localized protein 19;(source:Araport11)","AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 (AHL19)","AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 (AHL19)"]
["AT4G14465","grey","AT-hook protein. Overexpression results in early flowering in short and long days.","AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 20 (AHL20)","AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 20 (AHL20)"]
["AT2G45430","grey","Encodes a nuclear localized AT hook domain containing protein that can bind AT rich DNA in vitro. Overexpression of the gene results in delayed flowering. Is likely to act redundantly with AHL18, AHL27 and AHL29 in the regulation of flowering. It is also involved in both photo- and skotomorphogenesis.","AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 22 (AHL22)","AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 22 (AHL22)"]
["AT4G04770","grey","Encodes an iron-stimulated ATPase. A member of the NAP subfamily of ABC transporters. Involved in Fe-S cluster assembly. Similar to SufB. Involved in the regulation of iron homeostasis. Able to form homodimers. Interacts with AtNAP7 inside the chloroplast.","ATP-BINDING CASSETTE I8 (ABCI8)","ATP BINDING CASSETTE PROTEIN 1 (ATABC1);LONG AFTER FR (LAF6);ARABIDOPSIS THALIANA NUCLEOSOME ASSEMBLY PROTEIN 1 (ATNAP1);ATP BINDING CASSETTE PROTEIN 1 (ABC1);ATP-BINDING CASSETTE I8 (ABCI8)"]
["AT1G58080","grey","ATP phosphoribosyl transferase, catalyses first step of histidine biosynthesis","ATP PHOSPHORIBOSYL TRANSFERASE 1 (ATP-PRT1)","ATP PHOSPHORIBOSYL TRANSFERASE 1 (ATP-PRT1); (HISN1A);ATP PHOSPHORIBOSYL TRANSFERASE 1 (ATATP-PRT1)"]
["AT1G09795","grey","ATP phosphoribosyl transferase, catalyses first step of histidine biosynthesis","ATP PHOSPHORIBOSYL TRANSFERASE 2 (ATP-PRT2)","ATP PHOSPHORIBOSYL TRANSFERASE 2 (ATATP-PRT2);ATP PHOSPHORIBOSYL TRANSFERASE 2 (ATP-PRT2); (HISN1B)"]
["AT3G22890","grey","encodes ATP sulfurylase, the first enzyme in the sulfate assimilation pathway of Arabidopsis. It may also participate in selenium metabolism. The mRNA is cell-to-cell mobile.","ATP SULFURYLASE 1 (APS1)","ATP SULFURYLASE 1 (APS1); (ATPS1)"]
["AT5G07320","grey","Encodes an APC isoform in Arabidopsis, a calcium-dependent mitochondrial ATP-Mg/Pi transporter.","ATP/PHOSPHATE CARRIER 3 (APC3)","ATP/PHOSPHATE CARRIER 3 (APC3)"]
["AT3G28345","grey","Encodes an ATP-binding cassette (ABC) transporter. Expressed in the vascular tissue of primary stem.","ATP-BINDING CASSETTE B15 (ABCB15)","ATP-BINDING CASSETTE B15 (ABCB15);MULTI-DRUG RESISTANCE 13 (MDR13)"]
["AT3G21580","grey","cobalt ion transmembrane transporter;(source:Araport11)","ATP-BINDING CASSETTE I12 (ABCI12)","ATP-BINDING CASSETTE I12 (ABCI12)"]
["AT1G56310","grey","DEDDy-type 3&#8242; -> 5&#8242; exoribonuclease involved in miRNA degradation.","ATRIMMER2 (ATRM2)","ATRIMMER2 (ATRM2)"]
["AT3G56430","grey","TIM domain protein. Associates with components of mitochondrial complex I and III. May be involved in biogenesis of respiratory chain components.","ATTIM21-LIKE 2 (ATTIM21L-2)","ATTIM21-LIKE 2 (ATTIM21L-2)"]
["AT5G57110","grey","Arabidopsis-autoinhibited Ca2+ -ATPase, isoform 8, contains all of the characteristic motifs of Ca2+ -transporting P-type Ca2+ -ATPases and is localized to the plasma membrane.ACA8 and ACA10, as well as ACA4 and ACA11, are critical in maintaining low resting cytosol Ca2+ level (DOI:10.1093/plphys/kiad047)","AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8 (ACA8)","AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8 (AT-ACA8);AUTOINHIBITED CA2+ -ATPASE, ISOFORM 8 (ACA8)"]
["AT4G16520","grey","Autophagy protein.","AUTOPHAGY 8F (ATG8F)","AUTOPHAGY 8F (ATG8F)"]
["AT1G54990","grey","auxin response mutant (AXR4) The mRNA is cell-to-cell mobile.","AUXIN RESISTANT 4 (AXR4)","AUXIN RESISTANT 4 (AXR4);REDUCED ROOT GRAVITROPISM (RGR);REDUCED ROOT GRAVITROPISM 1 (RGR1)"]
["AT4G30080","grey","Involved in root cap cell differentiation. Gene expression is regulated by mir160.Located in the nucleus.","AUXIN RESPONSE FACTOR 16 (ARF16)","AUXIN RESPONSE FACTOR 16 (ARF16)"]
["AT1G77850","grey","Encodes a transcriptional regulator that directly binds to the promoter of MYB108 and plays a crucial role in anther dehiscence, pollen wall pattern formation, tapetum development, and auxin signal transduction in anthers. It is post-transcriptionally regulated by miR160 and regulates early auxin response genes and megaspore mother cell specification.","AUXIN RESPONSE FACTOR 17 (ARF17)","AUXIN RESPONSE FACTOR 17 (ARF17)"]
["AT1G78100","grey","F-box family protein;(source:Araport11)","AUXIN UP-REGULATED F-BOX PROTEIN 1 (AUF1)","AUXIN UP-REGULATED F-BOX PROTEIN 1 (AUF1)"]
["AT4G12980","grey","Activated by OXS2 under the treatment of salt.","AUXIN-RESPONSIVE FAMILY PROTEIN GENE (DEG18)","AUXIN-RESPONSIVE FAMILY PROTEIN GENE (DEG18);AUXIN-RESPONSIVE FAMILY PROTEIN GENE (ARAPORT11)"]
["AT5G13160","grey","Mutant is defective in perception of Pseudomonas syringae avirulence gene avrPphB. Encodes a putative serine-threonine kinase.","AVRPPHB SUSCEPTIBLE 1 (PBS1)","AVRPPHB SUSCEPTIBLE 1 (PBS1)"]
["AT2G40620","grey","Basic leucine zipper transcription factor. Localizes from cytoplasm to the nucleus under heat stress.","BASIC LEUCINE-ZIPPER 18 (BZIP18)","BASIC LEUCINE-ZIPPER 18 (BZIP18)"]
["AT2G21240","grey","Encodes a member of the BASIC PENTACYSTEINE (BPC) proteins. BPC proteins are plant-specific transcription factors present throughout land plants. BPC transcription factor family is integral for a wide range of processes that support normal growth and development.","BASIC PENTACYSTEINE 4 (BPC4)","BASIC PENTACYSTEINE 4 (BPC4); (BBR);BASIC PENTACYSTEINE 4 (ATBPC4)"]
["AT2G40070","grey","Encodes a microtubule-associated protein involved in cortical microtubule organization during leaf development.","BASIC PROLINE-RICH PROTEIN 1 (BPP1)","BASIC PROLINE-RICH PROTEIN 1 (BPP1)"]
["AT1G42990","grey","bZIP60 consists of a bZIP DNA binding domain followed by a putative transmembrane domain. bZIP60 mRNA is upregulated by the addition of ER stress inducers, tunicamycin (inhibitor of N-linked glycosylation), DTT (inhibitor of disulfide bond formation) and azetin-2-carboxylate (proline analog perturbing protein structure). Upon ER stress, bZIP60 mRNA is spliced by IRE1A and IRE1B to produce bZIP60-S, an active transcription factor without the transmembrane domain. bZIP60-U, a product of unspliced form of bZIP60 mRNA, is localized at the ER membrane and bZIP60-S is localized in the nucleus.","BASIC REGION/LEUCINE ZIPPER MOTIF 60 (BZIP60)","BASIC REGION/LEUCINE ZIPPER MOTIF 60 (ATBZIP60);BBASIC REGION/LEUCINE ZIPPER MOTIF 60 (BZIP60);BASIC REGION/LEUCINE ZIPPER MOTIF 60 (BZIP60)"]
["AT3G21150","grey","Encodes a protein with a B-box domain predicted to act as a transcription factor. Expression of the BBX32 gene is affected by monochromatic red light. Genetic analysis shows BBX32 is under circadian control; it is a morning gene under clock regulation.","B-BOX DOMAIN PROTEIN 32 (BBX32)","B-BOX DOMAIN PROTEIN 32 (BBX32);EMF1-INTERACTING PROTEIN 6 (EIP6); (ATBBX32)"]
["AT5G01980","grey","RING/U-box superfamily protein;(source:Araport11)","BCA2A ZINC FINGER ATL 16 (BTL16)","BCA2A ZINC FINGER ATL 16 (BTL16)"]
["AT5G59550","grey","Encodes an ABA- and drought-induced RING-DUF1117 gene whose mutation results in hyposensitive phenotypes toward ABA in terms of germination rate and stomatal closure and markedly reduced tolerance to drought stress relative to wild-type plants.","BCA2A ZINC FINGER ATL 9 (BTL09)","BCA2A ZINC FINGER ATL 9 (BTL09)"]
["AT3G51780","grey","A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. BD domain of ATBAG4 had highest similarity to human DB domain of BAG protein. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.","BCL-2-ASSOCIATED ATHANOGENE 4 (BAG4)","BCL-2-ASSOCIATED ATHANOGENE 4 (ATBAG4);BCL-2-ASSOCIATED ATHANOGENE 4 (BAG4)"]
["AT2G44460","grey","Beta-glucosidase, major myrosinase which initiates sulfur reallocation by hydrolyzing particular GL species, conferring sulfur deficiency tolerance, especially during early development.","BETA GLUCOSIDASE 28 (BGLU28)","BETA GLUCOSIDASE 28 (BGLU28)"]
["AT4G27820","grey","beta glucosidase 9;(source:Araport11)","BETA GLUCOSIDASE 9 (BGLU9)","BETA GLUCOSIDASE 9 (BGLU9)"]
["AT2G45880","grey","Encodes a beta-amylase-like protein present in the nucleus rather than targeted to the chloroplast. Contains BRASSINAZOLE RESISTANT1 (BZR1)-type DNA binding domains. Activates gene expression in protoplast transactivation assays.","BETA-AMYLASE 7 (BAM7)","BETA-AMYLASE 4 (BMY4);BETA-AMYLASE 7 (BAM7)"]
["AT4G38200","grey","Encodes one of the functionally redundant ARF guanine-nucleotide exchange factors (ARF-GEFs). Functions as regulators of post-Golgi trafficking.","BIG1 (BIG1)","BIG1 (BIG1)"]
["AT2G21385","grey","Encodes a chloroplast stroma localized protein that is found only in the green plant lineage. It is involved in assembly of the chloroplast ATP synthase complex.","CONSERVED IN THE GREEN LINEAGE AND DIATOMS 11 (CGLD11)","BIOGENESIS FACTORS REQUIRED FOR ATP SYNTHASE 3 (BFA3);CONSERVED IN THE GREEN LINEAGE AND DIATOMS 11 (CGLD11);CONSERVED IN THE GREEN LINEAGE AND DIATOMS 11 (ATCGLD11)"]
["AT2G30330","grey","Putative homolog of mammalian BLOC-1 Subunit 1. Protein - protein interaction with BLOS2 and also with SNX1.Located in endomembrane system and hypothesized to be involved in endomembrane transport.","BLOC SUBUNIT 1 (BLOS1)","BLOC SUBUNIT 1 (BLOS1)"]
["AT5G20230","grey","Encodes a Al-stress-induced gene. Along with TCF, it promotes lignin biosynthesis in response to cold stress. The mRNA is cell-to-cell mobile.","BLUE-COPPER-BINDING PROTEIN (BCB)","BLUE-COPPER-BINDING PROTEIN (ATBCB);BLUE-COPPER-BINDING PROTEIN (BCB);SENESCENCE ASSOCIATED GENE 14 (SAG14);BLUE COPPER BINDING PROTEIN (BCB)"]
["AT1G27690","grey","lipase, putative (DUF620);(source:Araport11)","BOUNDARY OF ROP DOMAIN3 (BDR3)","BOUNDARY OF ROP DOMAIN3 (BDR3)"]
["AT3G19540","grey","glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620);(source:Araport11)","BOUNDARY OF ROP DOMAIN4 (BDR4)","BOUNDARY OF ROP DOMAIN4 (BDR4)"]
["AT5G05840","grey","replication factor C subunit, putative (DUF620);(source:Araport11)","BOUNDARY OF ROP DOMAIN6 (BDR6)","BOUNDARY OF ROP DOMAIN6 (BDR6)"]
["AT3G55720","grey","replication factor C subunit, putative (DUF620);(source:Araport11)","BOUNDARY OF ROP DOMAIN7 (BDR7)","BOUNDARY OF ROP DOMAIN7 (BDR7)"]
["AT1G55510","grey","branched-chain alpha-keto acid decarboxylase E1 beta","BRANCHED-CHAIN ALPHA-KETO ACID DECARBOXYLASE E1 BETA SUBUNIT (BCDH BETA1)","BRANCHED-CHAIN ALPHA-KETO ACID DECARBOXYLASE E1 BETA SUBUNIT (BCDH BETA1); (E1B1)"]
["AT4G00710","grey","Encodes BR-signaling kinase 3 (BSK3), one of the three homologous BR-signaling kinases (BSK1, AT4G35230; BSK2, AT5G46570; BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized.","BRASSINOSTEROID-SIGNALING KINASE 3 (BSK3)","BRASSINOSTEROID-SIGNALING KINASE 3 (BSK3)"]
["AT1G01740","grey","kinase with tetratricopeptide repeat domain-containing protein;(source:Araport11)","BRASSINOSTEROID-SIGNALING KINASE 4 (BSK4)","BRASSINOSTEROID-SIGNALING KINASE 4 (BSK4)"]
["AT3G06820","grey","Mov34/MPN/PAD-1 family protein;(source:Araport11)","BRCA1/BRCA2-CONTAINING COMPLEX 36 HOMOLOG B (BRCC36B)","BRCA1/BRCA2-CONTAINING COMPLEX 36 HOMOLOG B (BRCC36B); (AtBRCC36B)"]
["AT3G21480","grey","BRCT domain-containing DNA repair protein;(source:Araport11)","BRCT5 DOMAIN CONTAINING PROTEIN 4 (BCP4)","BRCT5 DOMAIN CONTAINING PROTEIN 4 (BCP4)"]
["AT4G33430","grey","Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. Contributes to postinvasive immunity against Alternaria brassicola.","BRI1-ASSOCIATED RECEPTOR KINASE (BAK1)","BRI1-ASSOCIATED RECEPTOR KINASE (BAK1)"]
["AT3G08780","grey","BRISC complex subunit Abro1-like protein;(source:Araport11)","BRISC COMPLEX SUBUNIT ABRO1-LIKE PROTEIN (BCSAP)","BRISC COMPLEX SUBUNIT ABRO1-LIKE PROTEIN (BCSAP)"]
["AT1G05910","grey","Encodes an acetylated histone-binding protein BRAT1. BRAT1 forms a complex with BRP1 to prevent transcriptional silencing.","BROMODOMAIN AND ATPASE DOMAIN-CONTAINING PROTEIN 1 (BRAT1)","BROMODOMAIN AND ATPASE DOMAIN-CONTAINING PROTEIN 1 (BRAT1)"]
["AT2G42080","grey","Encodes a mitochondrial-localized DnaJ/Heat shock protein 40 (DnaJ/Hsp40) family, which is involved in protein folding. It induces cell elongation during brassinosteroid signaling through the promotion of ATP synthesis in mitochondria.","BRZ-INSENSITIVE-LONG HYPOCOTYLS 2 (BIL2)","BRZ-INSENSITIVE-LONG HYPOCOTYLS 2 (BIL2)"]
["AT1G50270","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)",null,"BTB/POZ PROTEIN HYPERSENSITIVE TO ABA 1 (BPH1)"]
["AT5G21010","grey","Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1), AT3G06190 (BPM2), AT2G39760 (BPM3), AT3G03740 (BPM4), AT5G21010 (BPM5) and AT3G43700 (BPM6).","BTB-POZ AND MATH DOMAIN 5 (BPM5)","BTB-POZ AND MATH DOMAIN 5 (ATBPM5);BTB-POZ AND MATH DOMAIN 5 (BPM5)"]
["AT3G19590","grey","Encodes a protein that may have a role in the spindle assembly checkpoint.","BUB (BUDDING UNINHIBITED BY BENZYMIDAZOL) 3.1 (BUB3.1)","BUB (BUDDING UNINHIBITED BY BENZYMIDAZOL) 3.1 (BUB3.1)"]
["AT4G39110","grey","bups1 and bups1/2 double mutants have reduced feritlity due to premature rupture of pollen tubes before they reach the ovule. BUSP1 interacts with RALF4/19 peptide ligands and ANX1/2 receptors. BUPS/ANX signaling may regulate and promote pollen tube growth.","BUDDHAS PAPER SEAL 1 (BUPS1)","BUDDHAS PAPER SEAL 1 (BUPS1);PIRITHIOUS1 (PIR1)"]
["AT5G49480","grey","AtCP1 encodes a novel Ca2+-binding protein, which shares sequence similarities with calmodulins. The expression of AtCP1 is induced by NaCl. The mRNA is cell-to-cell mobile.","CA2+-BINDING PROTEIN 1 (CP1)","CA2+-BINDING PROTEIN 1 (CP1);CA2+-BINDING PROTEIN 1 (ATCP1)"]
["AT5G21326","grey","Ca2+regulated serine-threonine protein kinase family protein;(source:Araport11)","CALCINEURIN B-LIKE PROTEIN (CBL)-INTERACTING PROTEIN KINASE 26 (CIPK26)","CALCINEURIN B-LIKE PROTEIN (CBL)-INTERACTING PROTEIN KINASE 26 (CIPK26)"]
["AT4G38230","grey","member of Calcium Dependent Protein Kinase","CALCIUM-DEPENDENT PROTEIN KINASE 26 (CPK26)","CALCIUM-DEPENDENT PROTEIN KINASE 26 (CPK26)"]
["AT2G17290","grey","Encodes calcium dependent protein kinase 6 (CPK6), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK6 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. The protein kinase CPK6 is shown in biochemical assays to be directly activated by elevations in calcium concentrations in the physiological range (Laanements et al., 2013 PlantPhys.; PMID: 23766366). These data correlate with the in vivo function of CPK6 in Ca2+ and ABA activation of S-type anion channels (Mori et al., 2006 PLoS Biol.; PMID: 17032064) and the ability of CPK6 to mediate ABA activation of SLAC1 (Brandt et al., 2012 PNAS; PMID: 22689970). The mRNA is cell-to-cell mobile.","CALCIUM DEPENDENT PROTEIN KINASE 6 (CPK6)","CALCIUM-DEPENDENT PROTEIN KINASE 6 (CPK6);ARABIDOPSIS THALIANA CALCIUM-DEPENDENT PROTEIN KINASE 6 (ATCPK6);ARABIDOPSIS THALIANA CALMODULIN-DOMAIN PROTEIN KINASE 3 (ATCDPK3);CALCIUM DEPENDENT PROTEIN KINASE 6 (CPK6)"]
["AT2G41010","grey","Encodes a novel calmodulin binding protein whose gene expression is induced by dehydration and ionic (salt) and non-ionic (mannitol) osmotic stress. Lines over-expressing this gene are more sensitive and anti-sense lines are more tolerant to osmotic stress, suggesting this gene may be a negative regulator of response to osmotic stress.","CALMODULIN (CAM)-BINDING PROTEIN OF 25 KDA (CAMBP25)","CALMODULIN (CAM)-BINDING PROTEIN OF 25 KDA (ATCAMBP25);CALMODULIN (CAM)-BINDING PROTEIN OF 25 KDA (CAMBP25)"]
["AT5G21274","grey","Encodes a calmodulin isoform. Expressed in leaves.","CALMODULIN 6 (CAM6)","CALMODULIN 6 (CAM6); (ACAM-6)"]
["AT5G64220","grey","CAMTA2 proteins bind to the AtALMT1 promoter at in vitro. The gene itself is Al inducible, and AtALMT1 expression is partially repressed in camta2 mutant. The mRNA is cell-to-cell mobile.","CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 (CAMTA2)","CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 (CAMTA2)"]
["AT3G59090","grey","tobamovirus multiplication protein;(source:Araport11)","CANDIDATE G-PROTEIN COUPLED RECEPTOR 3 (CAND3)","CANDIDATE G-PROTEIN COUPLED RECEPTOR 3 (CAND3)"]
["AT5G27420","grey","Encodes CNI1 (Carbon/Nitrogen Insensitive1) (also named as ATL31), a RING type ubiquitin ligase that functions in the Carbon/Nitrogen response for growth phase transition in Arabidopsis seedlings. The mRNA is cell-to-cell mobile.","CARBON/NITROGEN INSENSITIVE 1 (CNI1)","CARBON/NITROGEN INSENSITIVE 1 (CNI1);ARABIDOPSIS TOXICOS EN LEVADURA 31 (ATL31)"]
["AT1G49660","grey","Encodes a protein whose carboxylesterase activity was tested using pNA.","CARBOXYESTERASE 5 (CXE5)","CARBOXYESTERASE 5 (CXE5);CARBOXYESTERASE 5 (AtCXE5)"]
["AT4G14340","grey","Phosphorylates serine or threonine residues that are near and C-terminal to acidic side chains on a variety of target proteins. Member of CKL gene family (CKL-C group).","CASEIN KINASE I (CKI1)","CASEIN KINASE I (CKI1);CASEIN KINASE I-LIKE 11 (CKL11)"]
["AT2G44680","grey","Encodes casein kinase II beta chain, a CK2 regulatory subunit. Nuclear-localized CKB4 protein exists in vivo as different isoforms, resulting from phosphorylation on serine residues. The phosphorylated isoforms are the preferred substrate for ubiquitination and degradation by the proteasome pathway. Involved in regulation of circadian clock.","CASEIN KINASE II BETA SUBUNIT 4 (CKB4)","CASEIN KINASE II BETA SUBUNIT 4 (CKB4)"]
["AT4G28540","grey","Member of CKL gene family (CKL-C group).","CASEIN KINASE I-LIKE 6 (CKL6)","CASEIN KINASE I-LIKE 6 (CKL6); (PAPK1)"]
["AT4G20390","grey","Uncharacterized protein family (UPF0497);(source:Araport11)","CASP-LIKE PROTEIN 1B2 (CASPL1B2)","CASP-LIKE PROTEIN 1B2 (CASPL1B2)"]
["AT4G15630","grey","Uncharacterized protein family (UPF0497);(source:Araport11)","CASP-LIKE PROTEIN 1E1 (CASPL1E1)","CASP-LIKE PROTEIN 1E1 (CASPL1E1)"]
["AT5G54980","grey","Uncharacterized protein family (UPF0497);(source:Araport11)","CASP-LIKE PROTEIN 2D1 (CASPL2D1)","CASP-LIKE PROTEIN 2D1 (CASPL2D1)"]
["AT5G40300","grey","Uncharacterized protein family (UPF0497);(source:Araport11)","CASP-LIKE PROTEIN 4A1 (CASPL4A1)","CASP-LIKE PROTEIN 4A1 (CASPL4A1)"]
["AT2G28370","grey","Uncharacterized protein family (UPF0497);(source:Araport11)","CASP-LIKE PROTEIN 5A2 (CASPL5A2)","CASP-LIKE PROTEIN 5A2 (CASPL5A2)"]
["AT3G03720","grey","Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters.","CATIONIC AMINO ACID TRANSPORTER 4 (CAT4)","CATIONIC AMINO ACID TRANSPORTER 4 (CAT4); (ATCAT4)"]
["AT2G34960","grey","Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. Localized to the plasma membrane.","CATIONIC AMINO ACID TRANSPORTER 5 (CAT5)","CATIONIC AMINO ACID TRANSPORTER 5 (CAT5)"]
["AT1G05940","grey","Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters.","CATIONIC AMINO ACID TRANSPORTER 9 (CAT9)","CATIONIC AMINO ACID TRANSPORTER 9 (CAT9)"]
["AT3G54900","grey","A.thaliana PICOT protein.It activates CAX1 gene Calcium transport activity.In other organisms, PICOT proteins appear to play a negative regulatory role in cellular stress responses.","CAX INTERACTING PROTEIN 1 (CXIP1)","CAX INTERACTING PROTEIN 1 (CXIP1);GLUTAREDOXIN (ATGRXCP); (ATGRXS14)"]
["AT3G17510","grey","Encodes a CBL-interacting protein kinase. Specifically interacts with ECT1 and ECT2.","CBL-INTERACTING PROTEIN KINASE 1 (CIPK1)","CBL-INTERACTING PROTEIN KINASE 1 (CIPK1);SNF1-RELATED PROTEIN KINASE 3.16 (SnRK3.16)"]
["AT2G33600","grey","Encodes a protein with homology to members of the dihydroflavonol-4-reductase (DFR) superfamily. Its expression pattern suggests that AtCRL2 is involved in the synthesis and/or maintenance of vascular tissue.","CCR(CINNAMOYL COA:NADP OXIDOREDUCTASE)-LIKE 2 (CRL2)","CCR(CINNAMOYL COA:NADP OXIDOREDUCTASE)-LIKE 2 (CRL2); (ATCRL2)"]
["AT3G44260","grey","Encodes one of the homologs of the yeast CCR4-associated factor 1: AT3G44260 (CAF1a), AT5G22250 (CAF1b). Has mRNA deadenylation activity. Also plays a role in plant defense responses.","CCR4- ASSOCIATED FACTOR 1A (CAF1a)","CCR4- ASSOCIATED FACTOR 1A (AtCAF1a);CCR4- ASSOCIATED FACTOR 1A (CAF1a)"]
["AT2G32070","grey","Deadenylase.","CCR4-ASSOCIATED FACTOR 1K (CAF1K)","CCR4-ASSOCIATED FACTOR 1K (CAF1K)"]
["AT1G62430","grey","Encodes a CDP-diacylglycerol synthase, involved in phospholipid biosynthesis.","CDP-DIACYLGLYCEROL SYNTHASE 1 (CDS1)","CDP-DIACYLGLYCEROL SYNTHASE 1 (ATCDS1);CDP-DIACYLGLYCEROL SYNTHASE 1 (CDS1)"]
["AT1G17630","grey","Encodes a PPR protein involved in mitochondrial functioning. Mutants suppress cell wall defects caused by C17 chemical inhibitor. Mutants are defective in cytochrome c maturation and activation of mitochondrial retrograde signalling.","CELL WALL MAINTAINER 1 (CWM1)","CELL WALL MAINTAINER 1 (CWM1)"]
["AT2G22125","grey","Encodes a protein involved in cell elongation in root and anther filaments. Mutants have greater cell volumes in root tissues and have additive phenotypes with other cell expansion mutants such as those carrying mutations in COB, QUI and POM1 loci. POM2/CSI1 promotes Cellulose Synthase and microtubule co-alignment. The mRNA is cell-to-cell mobile.","CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 1 (CSI1)","CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 1 (CSI1);POM-POM 2 (POM2)"]
["AT1G14980","grey","Encodes mitochondrial-localized chaperonin 10 that complements the E.coli groES mutant. Its mRNA is upregulated in response to heat shock treatment and is expressed uniformly in various organs.","CHAPERONIN 10 (CPN10)","CHAPERONIN 10 (CPN10)"]
["AT3G62080","grey","Encodes a charged multi-vesicular body protein (CHMP7) homolog, that is an ESCRT-III-related protein and functions in the endosomal sorting pathway in humans. The Brassica homolog has been shown to be involved in plant growth and leaf senescence.","CHARGED MULTI-VESICULAR BODY PROTEIN 7 (CHMP7)","CHARGED MULTI-VESICULAR BODY PROTEIN 7 (CHMP7)"]
["AT5G17890","grey","Encodes a protein that appears to be involved in defense responses. Contains TIR, NB-LRR and LIM domains. A gain of function allele exhibits cold dependent phenotypes including apparent activation of defense responses and an increased freezing tolerance. The mRNA is cell-to-cell mobile.","DA1-RELATED PROTEIN 4 (DAR4)","CHILLING SENSITIVE 3 (CHS3); (CHS3);DA1-RELATED PROTEIN 4 (DAR4)"]
["AT2G43570","grey","Putative basic chitinase.","CHITINASE, PUTATIVE (CHI)","CHITINASE, PUTATIVE (CHI)"]
["AT3G46790","grey","Encodes a member of a PCMP (plant combinatorial and modular protein) family (PCMP-H subfamily) with 9 pentatricopeptide (PPR) repeats. The protein is involved the intergenic processing of chloroplast RNA between rps7 and ndhB, which is essential for ndhB translation.","CHLORORESPIRATORY REDUCTION 2 (CRR2)","CHLORORESPIRATORY REDUCTION 2 (CRR2)"]
["AT5G55740","grey","Encodes a member of the E+ subgroup of the PPR protein family, containing the E and E+ motifs following a tandem array of PPR motifs. It also contains an unknown motif consisting of 15 aa, which is highly conserved in some PPR proteins, including CRR4. CRR21 is involved in RNA editing of the site 2 of ndhD (ndhD-2),which encodes a subunit of the NDH complex. The RNA editing changes aa 128 from Ser to Leu. Mutants have impaired NDH complex activity.","CHLORORESPIRATORY REDUCTION 21 (CRR21)","CHLORORESPIRATORY REDUCTION 21 (CRR21)"]
["AT1G69370","grey","Encodes chorismate mutase 3 (CM3).","CHORISMATE MUTASE 3 (CM3)","CHORISMATE MUTASE 3 (CM3); (cm-3); (ATCM3)"]
["AT5G63950","grey","chromatin remodeling 24;(source:Araport11)","CHROMATIN REMODELING 24 (CHR24)","CHROMATIN REMODELING 24 (CHR24)"]
["AT5G44800","grey","Interacts with transcription factors involved in floral meristem identity and affects the expression of key floral regulators. Affects H3K27me3 and H3K4me3 levels at a subset of loci in the genome.","CHROMATIN REMODELING 4 (CHR4)","CHROMATIN REMODELING 4 (CHR4);PICKLE RELATED 1 (PKR1); (MI-2-LIKE)"]
["AT3G24340","grey","Involved in gene silencing. Locus-specific regulator of 24nt-siRNA expression, works together with CLSY1-3 as the master regulators of essentially all Pol-IV-dependent 24nt-siRNAs.","CHROMATIN REMODELING 40 (chr40)","CHROMATIN REMODELING 40 (chr40);CLASSY4 (CLSY4)"]
["AT5G58770","grey","AtCPT7 synthesizes medium-chain polyprenols of approximately 55 carbons in length. The enzyme utlizes geranylgeranyl pyrophosphate (GGPP) and isopentenyl pyrophosphate (IPP) as substrates. The enzymatic product accumulates into plastdial membranes (DOI:10.1105/tpc.16.00796).","CIS-PRENYLTRANSFERASE 4 (CPT4)","CIS-PRENYLTRANSFERASE 7 (CPT7); (ATCPT7); (ATCPT4);CIS-PRENYLTRANSFERASE 4 (CPT4)"]
["AT4G19810","grey","ChiC encodes a Class V chitinase that is a part of glycoside hydrolase family 18 based on CAZy groupings. It appears to primarily act as an exochitinase in vitro where it predominantly cleaves a chitobiose (GlcNAc)2 residue from the non-reducing end of a chitin oligosaccharide. However, it shows some minor endochitinase activity in vitro, as well. A putative 24 amino-acid signal peptide may direct this protein to the secretory system and it has been detected in cell wall apoplastic fluid. RT-PCR experiments demonstrate that ChiC transcript levels are increased in response to abscisisc acid, jasmonic acid, and NaCl stress. Microarray results also suggest that transcript levels rise in response to osmotic stress, two fungal pathogens, a bacterial pathogen, and the elicitor flagellin. The mRNA is cell-to-cell mobile.","CLASS V CHITINASE (ChiC)","CLASS V CHITINASE (ChiC)"]
["AT2G40060","grey","Encodes a clathrin that is localized to the cortical division zone and the cell plate and colocalizes with TPLATE during cell plate anchoring. The mRNA is cell-to-cell mobile.","CLATHRIN LIGHT CHAIN 2 (CLC2)","CLATHRIN LIGHT CHAIN 2 (CLC2)"]
["AT3G51890","grey","Clathrin light chain protein;(source:Araport11)","CLATHRIN LIGHT CHAIN 3 (CLC3)","CLATHRIN LIGHT CHAIN 3 (CLC3)"]
["AT2G23950","grey","Encodes an LLR receptor kinase that is expressed in protophloem and is required for CLE peptide sensing in roots. One of a group of LRR-RLKs, designated as CLAVATA3 INSENSITIVE RECEPTOR KINASES (CIKs), that acts as a co-regulator and has essential roles in regulating CLV3-mediated stem cell homeostasis.","CLE-RESISTANT RECEPTOR KINASE (CLERK)","CLAVATA3 INSENSITIVE RECEPTOR KINASE 2 (CIK2);CLE-RESISTANT RECEPTOR KINASE (CLERK)"]
["AT2G01505","grey","Member of a large family of putative ligands homologous to the Clavata3 gene. Consists of a single exon. Involved in root meristem cell differentiation. Functions along with CLE17 in lateral root emergence.","CLAVATA3/ESR-RELATED 16 (CLE16)","CLAVATA3/ESR-RELATED 16 (CLE16)"]
["AT1G61010","grey","cleavage and polyadenylation specificity factor 73-I;(source:Araport11)","CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 73-I (CPSF73-I)","CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 73-I (CPSF73-I)"]
["AT1G71800","grey","RNA 3&#8242;-end?processing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC. Member of CstF complex.","CLEAVAGE STIMULATING FACTOR 64 (CSTF64)","CLEAVAGE STIMULATING FACTOR 64 (CSTF64)"]
["AT1G49970","grey","Encodes a ClpP-related sequence. Though similar to ClpP proteins, this does not contains the highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).","CLP PROTEASE PROTEOLYTIC SUBUNIT 1 (CLPR1)","CLP PROTEASE PROTEOLYTIC SUBUNIT 1 (CLPR1);NUCLEAR CLPP 5 (NCLPP5);SUPPRESSOR OF VARIEGATION 2 (SVR2); (CLPR1)"]
["AT5G04340","grey","Encodes a C2H2 zinc finger transcription factor that coordinately activates phytochelatin-synthesis related gene expression and directly targets GSH1 by binding to its promoter to positively regulate Cd accumulation and tolerance.","ZINC FINGER OF ARABIDOPSIS THALIANA 6 (ZAT6)","COLD INDUCED ZINC FINGER PROTEIN 2 (CZF2); (C2H2); (ATZAT6);ZINC FINGER OF ARABIDOPSIS THALIANA 6 (ZAT6)"]
["AT4G38680","grey","Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.","GLYCINE RICH PROTEIN 2 (GRP2)","COLD SHOCK PROTEIN 2 (CSP2);ARABIDOPSIS THALIANA COLD SHOCK PROTEIN 2 (ATCSP2);GLYCINE RICH PROTEIN 2 (GRP2);COLD SHOCK DOMAIN PROTEIN 2 (CSDP2)"]
["AT4G39260","grey","Encodes a glycine-rich protein with RNA binding domain at the N-terminus. Protein is structurally similar to proteins induced by stress in other plants. Gene expression is induced by cold. Transcript undergoes circadian oscillations that is depressed by overexpression of AtGRP7. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).","RNA-BINDING GLYCINE-RICH PROTEIN A6 (RBGA6)","COLD, CIRCADIAN RHYTHM, AND RNA BINDING 1 (CCR1);GLYCINE-RICH PROTEIN 8 (ATGRP8);GLYCINE-RICH RNA-BINDING PROTEIN 8 (GR-RBP8); (GRP8);RNA-BINDING GLYCINE-RICH PROTEIN A6 (RBGA6)"]
["AT5G67370","grey","DUF1230 family protein (DUF1230);(source:Araport11)","CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27 (CGLD27)","CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27 (CGLD27)"]
["AT5G16300","grey","Vps51/Vps67 family (components of vesicular transport) protein;(source:Araport11)","CONSERVED OLIGOMERIC GOLGI COMPLEX 1 (COG1)","CONSERVED OLIGOMERIC GOLGI COMPLEX 1 (COG1)"]
["AT3G24506","grey","Participates in the late stages of the biogenesis of 50S ribosomal subunits in plastids.","CONSERVED ONLY IN THE GREEN LINEAGE20B (CGL20B)","CONSERVED ONLY IN THE GREEN LINEAGE20B (CGL20B)"]
["AT4G14110","grey","Represses photomorphogenesis and induces skotomorphogenesis in the dark. A component of the COP9 signalosome complex.","CONSTITUTIVE PHOTOMORPHOGENIC 9 (COP9)","CONSTITUTIVE PHOTOMORPHOGENIC 9 (COP9);COP9 SIGNALOSOME SUBUNIT 8 (CSN8);FUSCA 7 (FUS7);EMBRYO DEFECTIVE 143 (EMB143)"]
["AT5G37190","grey","COP1-interacting protein 4, a nuclear-localized positive regulator of arabidopsis photomorphogenesis","COP1-INTERACTING PROTEIN 4 (CIP4)","COP1-INTERACTING PROTEIN 4 (CIP4)"]
["AT5G56280","grey","one of two genes encoding subunit 6 of COP9 signalosome complex. Protein contains a MPR1p and PAD1p N-terminal (MPN) domain at the N-terminal region and belongs to the Mov34 superfamily. Mutant and antisense expression result in a number of developmental defects and in ubiquitin/proteasome-mediated protein degradation.","COP9 SIGNALOSOME SUBUNIT 6A (CSN6A)","COP9 SIGNALOSOME SUBUNIT 6A (CSN6A)"]
["AT3G14190","grey","Encodes a 193 amino acid protein of unknown function. Contains a DEN-box (aa 14?16), a KEN-box, and the D-box (aa 46?54)and a third, unknown domain (aa 81?97). Loss of function alleles are defective in meiosis and have reduced fertility. pans1 mutants show premature loss of cohesion of sister chromatids during meioisis I and meiosis II resulting in abnormal chromosome segregation and unbalanced tetrads.","COPPER MODIFIED RESISTANCE 1 (CMR1)","COPPER MODIFIED RESISTANCE 1 (CMR1);PATRONUS 1 (PANS1)"]
["AT2G26975","grey","Plasma membrane Cu transporter.","COPPER TRANSPORTER 6 (COPT6)","COPPER TRANSPORTER 6 (COPT6)"]
["AT2G28190","grey","Encodes a chloroplastic copper/zinc superoxide dismutase CSD2 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage. Activation depends totally on CCS. Overexpression of a miR398-resistant form of CSD2 leads to more dramatic improvements in stress (hight light, Cu2+ and methyl viologen) tolerance than overexpression of wild-type CSD2. The mRNA is cell-to-cell mobile.","COPPER/ZINC SUPEROXIDE DISMUTASE 2 (CSD2)","COPPER/ZINC SUPEROXIDE DISMUTASE 2 (CSD2);COPPER/ZINC SUPEROXIDE DISMUTASE 2 (CZSOD2);SUPEROXIDE DISMUTASE 2 (SOD2); (ATSOD2)"]
["AT3G52120","grey","Interacts with CRY2 to regulate thermosensory flowering via FLM alternative splicing.","CRY2 INTERACTING SPLICING FACTOR 1 (CIS1)","CRY2 INTERACTING SPLICING FACTOR 1 (CIS1)"]
["AT4G34530","grey","Encodes a transcription factor CIB1 (cryptochrome-interacting basic-helix-loop-helix). CIB1 interacts with CRY2 (cryptochrome 2) in a blue light-specific manner in yeast and Arabidopsis cells, and it acts together with additional CIB1-related proteins to promote CRY2-dependent floral initiation. CIB1 positively regulates FT expression.","CRYPTOCHROME-INTERACTING BASIC-HELIX-LOOP-HELIX 1 (CIB1)","CRYPTOCHROME-INTERACTING BASIC-HELIX-LOOP-HELIX 1 (CIB1)"]
["AT2G26280","grey","smr (Small MutS Related) domain-containing protein","CTC-INTERACTING DOMAIN 7 (CID7)","CTC-INTERACTING DOMAIN 7 (CID7)"]
["AT4G21670","grey","encodes a a novel transcriptional repressor harboring two double-stranded RNA-binding domains and a region homologous to the catalytic domain of RNA polymerase II C-terminal domain phosphatases found in yeast and in animals that regulate gene transcription. Protein exhibits innate phosphatase activity in vitro. Mutants exhibit hyperresponsiveness to ABA, cold, and NaCl.","C-TERMINAL DOMAIN PHOSPHATASE-LIKE 1 (CPL1)","C-TERMINAL DOMAIN PHOSPHATASE-LIKE 1 (CPL1);FIERY 2 (FRY2);C-TERMINAL DOMAIN PHOSPHATASE-LIKE 1 (ATCPL1); (ATCPL2);SHINY 4 (SHI4);REGULATORS OF C-REPEAT BINDING FACTOR (CBF) GENE EXPRESSION 2 (RCF2)"]
["AT3G23490","grey","Encodes a cyanase that catalyzes the bicarbonate-dependent breakdown of cyanate to ammonia and bicarbonate. CYN forms a hexadecamer and is believed to be a cytosolic protein. Long-term exposure to NaCl increases CYN transcript levels. It is also expressed at higher levels in flowers relative to stems, roots, and seedlings.","CYANASE (CYN)","CYANASE (CYN)"]
["AT4G34180","grey","Encodes a cyclase-family protein that is a negative regulator of cell death that regulates pathogen-induced symptom development.","CYCLASE1 (CYCLASE1)","CYCLASE1 (CYCLASE1)"]
["AT5G53130","grey","member of Cyclic nucleotide gated channel family","CYCLIC NUCLEOTIDE GATED CHANNEL 1 (CNGC1)","CYCLIC NUCLEOTIDE-GATED CHANNEL 1 (ATCNGC1);CYCLIC NUCLEOTIDE GATED CHANNEL 1 (CNGC1)"]
["AT4G37630","grey","core cell cycle genes; a quantitative trait gene for endoreduplication.","CYCLIN D5;1 (CYCD5;1)","CYCLIN D5;1 (CYCD5;1)"]
["AT1G73690","grey","cyclin dependent kinase activator CDKD;1. Nuclear localization. Involved in cell cycle regulation and cell differentiation.","CYCLIN-DEPENDENT KINASE D1;1 (CDKD1;1)","CYCLIN-DEPENDENT KINASE D1;1 (CDKD1;1);CYCLIN-DEPENDENT KINASE D1 (AT;CDKD;1); (CAK3AT)"]
["AT1G66750","grey","Encodes a CDK-activating kinase that interacts with SPT5, a regulator of transcription and histone methylation.","CDK-ACTIVATING KINASE 4 (CAK4)","CYCLIN-DEPENDENT KINASE D1;2 (CDKD1;2);CDK-ACTIVATING KINASE 4 (CAK4AT); (AT;CDKD;2); (CDKD;2);CDK-ACTIVATING KINASE 4 (CAK4)"]
["AT5G63370","grey","CDKG1 interacts with the splicing factor RSZ33 to regulate proper splicing of Cals5 pre-mRNA. It is necessary for the processing of recombination intermediates in the canonical ZMM recombination pathway. It acts early in the recombination process and is necessary to stabilize recombination intermediates.","CYCLIN-DEPENDENT KINASE G1 (CDKG1)","CYCLIN-DEPENDENT KINASE G1 (CDKG1)"]
["AT1G01940","grey","Heat stress induced cyclophilin involved in splicing of retained introns.Modulates phosphorylation status of PRP18 to modulate the splicosome activity under heat stress.","CYCLOPHILIN 18-1 (CYP18-1)","CYCLOPHILIN 18-1 (CYP18-1)"]
["AT5G35100","grey","Peptidyl-prolyl isomerase residues; K113 and E187 are essential for PPIase activity. Involved in photosystem II, LHC II supercomplex assembly.","CYCLOPHILIN28 (CYP28)","CYCLOPHILIN28 (CYP28)"]
["AT4G21400","grey","Encodes a cysteine-rich receptor-like protein kinase.","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 28 (CRK28)","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 28 (CRK28)"]
["AT1G70530","grey","Encodes a cysteine-rich receptor-like protein kinase.","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 3 (CRK3)","CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 3 (CRK3)"]
["AT4G33660","grey","cysteine-rich TM module stress tolerance protein;(source:Araport11)","CYSTEINE-RICH TRANSMEMBRANE MODULE 11 (ATHCYSTM11)","CYSTEINE-RICH TRANSMEMBRANE MODULE 11 (ATHCYSTM11)"]
["AT2G32210","grey","cysteine-rich/transmembrane domain A-like protein;(source:Araport11)","CYSTEINE-RICH TRANSMEMBRANE MODULE 6 (ATHCYSTM6)","CYSTEINE-RICH TRANSMEMBRANE MODULE 6 (ATHCYSTM6)"]
["AT3G60620","grey","cytidinediphosphate diacylglycerol synthase 5;(source:Araport11)","CYTIDINEDIPHOSPHATE DIACYLGLYCEROL SYNTHASE 5 (CDS5)","CYTIDINEDIPHOSPHATE DIACYLGLYCEROL SYNTHASE 5 (CDS5)"]
["ATMG01360","grey","cytochrome c oxidase subunit 1","CYTOCHROME OXIDASE (COX1)","CYTOCHROME OXIDASE (COX1)"]
["AT2G44520","grey","cytochrome c oxidase 10;(source:Araport11)","CYTOCHROME C OXIDASE 10 (COX10)","CYTOCHROME C OXIDASE 10 (COX10)"]
["AT2G35030","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)","CYTOCHROME C OXIDASE DEFICIENT 1 (COD1)","CYTOCHROME C OXIDASE DEFICIENT 1 (COD1)"]
["ATMG00730","grey","Encodes cytochrome c oxidase subunit 3.","CYTOCHROME C OXIDASE SUBUNIT 3 (COX3)","CYTOCHROME C OXIDASE SUBUNIT 3 (COX3)"]
["AT3G20083","grey","pseudogene of cytochrome P450;(source:Araport11)","CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 16 (CYP705A16)","CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 16 (CYP705A16)"]
["AT5G24960","grey","putative cytochrome P450","CYTOCHROME P450, FAMILY 71, SUBFAMILY A, POLYPEPTIDE 14 (CYP71A14)","CYTOCHROME P450, FAMILY 71, SUBFAMILY A, POLYPEPTIDE 14 (CYP71A14)"]
["AT3G14610","grey","putative cytochrome P450","CYTOCHROME P450, FAMILY 72, SUBFAMILY A, POLYPEPTIDE 7 (CYP72A7)","CYTOCHROME P450, FAMILY 72, SUBFAMILY A, POLYPEPTIDE 7 (CYP72A7)"]
["AT5G36220","grey","member of CYP81D family of cytochrome p450s. This gene was originally called CYP91A1, but was later renamed to CYP81D1.","CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 1 (CYP81D1)","CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 1 (CYP81D1);CYTOCHROME P450 91A1 (CYP91A1)"]
["AT5G10610","grey","member of CYP81K The mRNA is cell-to-cell mobile.","CYTOCHROME P450, FAMILY 81, SUBFAMILY K, POLYPEPTIDE 1 (CYP81K1)","CYTOCHROME P450, FAMILY 81, SUBFAMILY K, POLYPEPTIDE 1 (CYP81K1)"]
["AT4G37430","grey","Encodes a member of the CYP81F cytochrome P450 monooxygenase subfamily.","CYTOCHROME P450, FAMILY 91, SUBFAMILY A, POLYPEPTIDE 2 (CYP91A2)","CYTOCHROME P450, FAMILY 91, SUBFAMILY A, POLYPEPTIDE 2 (CYP91A2);CYTOCHROME P450 MONOOXYGENASE 81F1 (CYP81F1)"]
["AT1G25470","grey","encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.","CYTOKININ RESPONSE FACTOR 12 (CRF12)","CYTOKININ RESPONSE FACTOR 12 (CRF12)"]
["AT2G46310","grey","CRF5 encodes one of the six cytokinin response factors. It is transcriptionally upregulated in response to cytokinin. CRF5 belongs to the AP2/ERF superfamily of the transcriptional factors. CRF proteins rapidly relocalize to the nucleus in response to cytokinin. Analysis of loos-of-function mutants revealed that the CRFs function redundantly to regulate the development of embryos, cotyledons and leaves.","CYTOKININ RESPONSE FACTOR 5 (CRF5)","CYTOKININ RESPONSE FACTOR 5 (CRF5)"]
["AT2G30740","grey","Plays role in abscisic acid (ABA)-dependent pathway in response to dehydration; forms homo- or heterodimers in a kinase active dependent manner.","CYTOSOLIC ABA RECEPTOR KINASE 8 (CARK8)","CYTOSOLIC ABA RECEPTOR KINASE 8 (CARK8)"]
["AT3G54190","grey","WD40 repeat-like protein which interacts in the nucleus with the N-terminus of FBS proteins. Destabilized by FBS1.","D FBS INTERACTING PROTEIN 1 (FBIP1)","D FBS INTERACTING PROTEIN 1 (FBIP1)"]
["AT1G25360","grey","DYW-type pentatricopeptide repeat protein involved in C to U editing in mitochondria and chloroplasts.","D ORGANELLAR TRANSCRIPT PROCESSING 90 (OTP90)","D ORGANELLAR TRANSCRIPT PROCESSING 90 (OTP90)"]
["AT4G02860","grey","Phenazine biosynthesis PhzC/PhzF protein;(source:Araport11)","D-AMINO ACID RACEMASE2 (DAAR2)","D-AMINO ACID RACEMASE2 (DAAR2)"]
["AT5G12400","grey","PHD-finger and DNA binding domain-containing protein;(source:Araport11)","DDT-PHD PROTEIN3 (DDP3)","DDT-PHD PROTEIN3 (DDP3)"]
["AT5G38690","grey","Zinc-finger domain of monoamine-oxidase A repressor R1 protein;(source:Araport11)","DDT-RELATED PROTEIN1 (DDR1)","DDT-RELATED PROTEIN1 (DDR1)"]
["AT1G18950","grey","DDT domain superfamily;(source:Araport11)","DDT-RELATED PROTEIN4 (DDR4)","DDT-RELATED PROTEIN4 (DDR4)"]
["AT5G08630","grey","DDT domain-containing protein;(source:Araport11)","DDT-WAC PROTEIN1 (DDW1)","DDT-WAC PROTEIN1 (DDW1)"]
["AT3G17930","grey","Encodes a thylakoid membrane protein involved in the accumulation of the cytochrome b6/f complex.","DEFECTIVE ACCUMULATION OF CYTOCHROME B6/F COMPLEX (DAC)","DEFECTIVE ACCUMULATION OF CYTOCHROME B6/F COMPLEX (DAC)"]
["AT3G19240","grey","Together with DEM1 plays an essential role in cell division in plants, most likely through an interaction with RAN1.","DEFECTIVE EMBRYO AND MERISTEMS 2 (DEM2)","DEFECTIVE EMBRYO AND MERISTEMS 2 (DEM2)"]
["AT1G19100","grey","Encodes a member of the conserved Microrchidia (MORC) adenosine triphosphatase (ATPase) family, predicted to catalyze alterations in chromosome superstructure. Required for heterochromatin condensation and gene silencing.","DEFECTIVE IN MERISTEM SILENCING 11 (DMS11)","DEFECTIVE IN MERISTEM SILENCING 11 (DMS11);MICRORCHIDIA 6 (MORC6); (ATMORC6)"]
["AT3G24730","grey","mRNA splicing factor, thioredoxin-like U5 snRNP;(source:Araport11)","DEFECTIVE REPRESSION OF OLE3::LUC 1 (DROL1)","DEFECTIVE REPRESSION OF OLE3::LUC 1 (DROL1)"]
["AT5G08290","grey","Encodes Dim1 homolog.","YELLOW-LEAF-SPECIFIC GENE 8 (YLS8)","DEFECTIVE REPRESSION OF OLE3::LUC 1 (DROL1);YELLOW-LEAF-SPECIFIC GENE 8 (YLS8)"]
["AT4G18750","grey","Encodes a pentatricopeptide (PPR) protein involved in leaf and root development. dot4 mutants have an aberrant midgap venation pattern in juvenile leaves and cotyledons.","DEFECTIVELY ORGANIZED TRIBUTARIES 4 (DOT4)","DEFECTIVELY ORGANIZED TRIBUTARIES 4 (DOT4)"]
["AT5G45830","grey","Encodes DOG1 (DELAY OF GERMINATION 1). A quantitative trait locus involved in the control of seed dormancy. Belongs to a novel plant-specific gene family whose members include: DOG1-like 1-4 (DOGL1-4, At4g18660, At4g18680, At4g18690, At4g18650 respectively) and DOG1. DOG1 expression is seed-specific.","DELAY OF GERMINATION 1 (DOG1)","DELAY OF GERMINATION 1 (DOG1);GLUCOSE SENSING QTL 5 (GSQ5); (ATDOG1);GERMINATION ABILITY AFTER STORAGE 5 (GAAS5)"]
["AT3G55610","grey","encodes delta 1-pyrroline-5-carboxylate synthetase B. Gene expression is induced by dehydration, high salt and ABA. Knock-out mutations in P5CS2 are embryo-lethal. P5CS2 appears to be present in different cells and/or different subcellular locations from P5CS1 in a tissue-dependent manner. Mutants are defective in pollen development.","DELTA 1-PYRROLINE-5-CARBOXYLATE SYNTHASE 2 (P5CS2)","DELTA 1-PYRROLINE-5-CARBOXYLATE SYNTHASE 2 (P5CS2)"]
["AT4G21810","grey","DERLIN-2.1;(source:Araport11)","DERLIN-2.1 (DER2.1)","DERLIN-2.1 (DER2.1)"]
["AT1G48300","grey","Cytosolic iron-sulfur protein with a [2Fe-2S] cluster which synthesizes triacylglycerol (DGAT activity).","DIACYLGLYCEROL ACYLTRANSFERASE 3 (DGAT3)","DIACYLGLYCEROL ACYLTRANSFERASE 3 (DGAT3)"]
["AT4G30340","grey","encodes a diacylglycerol kinase. Applying a specific diacylglycerol kinase inhibitor to the growth media resulted in reduced root elongation and plant growth. Gene is expressed throughout the plant but is strongest in flowers and young seedlings.","DIACYLGLYCEROL KINASE 7 (DGK7)","DIACYLGLYCEROL KINASE 7 (DGK7);DIACYLGLYCEROL KINASE 7 (ATDGK7)"]
["AT1G01040","grey","Encodes a Dicer homolog. Dicer is a RNA helicase involved in microRNA processing. Mutations in this locus can result in embryo lethality. Embryo shape at seed maturity is globular-elongate. Other mutants convert the floral meristems to an indeterminate state, others yet show defects in ovule development. mRNA is expressed in all shoot tissues. DCL1 is able to produce miRNAs and siRNAs. The mRNA is cell-to-cell mobile.","DICER-LIKE 1 (DCL1)","DICER-LIKE 1 (DCL1);CARPEL FACTORY (CAF);SUSPENSOR 1 (SUS1);DICER-LIKE 1 (ATDCL1);ABNORMAL SUSPENSOR 1 (ASU1);EMBRYO DEFECTIVE 76 (EMB76);EMBRYO DEFECTIVE 60 (EMB60);SHORT INTEGUMENTS 1 (SIN1)"]
["AT3G11670","grey","Responsible for the final assembly of galactolipids in photosynthetic membranes. Provides stability to the PS I core complex (e.g. subunits PsaD, PsaE).","DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1 (DGD1)","DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1 (DGD1); (ATTS02)"]
["AT5G63350","grey","ABA&#8208;induced transcription repressor that acts as feedback regulator in ABA signalling.","ABA-INDUCED TRANSCRIPTION REPRESSOR 6 (AITR6)","DIG-LIKE 1 (DIL1);SDR4 LIKE3 (SFL3);ABA-INDUCED TRANSCRIPTION REPRESSOR 6 (AITR6)"]
["AT4G35420","grey","Encodes DRL1 (Dihydroflavonol 4-reductase-like1), a closely related homolog of the rice anther-specific gene OsDFR2. DRL1 may be involved in a metabolic pathway essential for pollen wall development and male fertility. Mutant plants have impaired pollen formation and seed production.","DIHYDROFLAVONOL 4-REDUCTASE-LIKE1 (DRL1)","DIHYDROFLAVONOL 4-REDUCTASE-LIKE1 (DRL1);TETRAKETIDE ALPHA-PYRONE REDUCTASE 1 (TKPR1)"]
["AT3G23940","grey","Encodes a member of the dihydroxyacid dehydrates family of proteins that encode enzymes involved in branched chain amino acid biosynthesis. Loss of function mutations have significantly reduced transmission and fertility due to defects in male and female gametophyte development and embryo lethality. Mutants have increased sensitivity to abiotic stressors which may be partially compensated by addition of amino acids to the growth medium.","DIHYDROXYACID DEHYDRATASE (DHAD)","DIHYDROXYACID DEHYDRATASE (DHAD)"]
["AT1G51360","grey","Involved in defense against fungal pathogens and located in cytosol.","DIMERIC A/B BARREL DOMAINS-PROTEIN 1 (DABB1)","DIMERIC A/B BARREL DOMAINS-PROTEIN 1 (ATDABB1);DIMERIC A/B BARREL DOMAINS-PROTEIN 1 (DABB1)"]
["AT4G10490","grey","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)","DMR6-LIKE OXYGENASE 2 (DLO2)","DMR6-LIKE OXYGENASE 2 (DLO2)"]
["AT4G00940","grey","Dof-type zinc finger DNA-binding family protein. Mutants show enhanced seed longevity due to increased seed storage protein accumulation and reduced seed coat permeabilty.","DNA BINDING WITH ONE FINGER 4.1 (DOF4.1)","DNA BINDING WITH ONE FINGER 4.1 (DOF4.1); (ATDOF4.1);INTERCELLULAR TRAFFICKING DOF 1 (ITD1)"]
["AT5G57160","grey","Encodes the Arabidopsis orthologue of the yeast and mammalian DNA ligase IV. Involved in the repair of DNA damage but, unlike in yeast, not required for T-DNA integration. Interacts with the Arabidopsis homologue of XRCC4.","(ATLIG4)","DNA LIGASE IV (LIG4); (ATLIG4)"]
["AT3G13235","grey","ubiquitin family protein;(source:Araport11)","DNA-DAMAGE INDUCIBLE 1 (DDI1)","DNA-DAMAGE INDUCIBLE 1 (DDI1)"]
["AT3G61850","grey","Zinc finger transcription factor of the Dof family involved in the control of seed germination.","DOF AFFECTING GERMINATION 1 (DAG1)","DOF AFFECTING GERMINATION 1 (DAG1)"]
["AT3G45610","grey","PEAR protein involved in the formation of a short-range concentration gradient that peaks at protophloem sieve elements, and activates gene expression that promotes radial growth. Locally promotes transcription of inhibitory HD-ZIP III genes, and thereby establishes a negative-feedback loop that forms a robust boundary that demarks the zone of cell division.","DOF TRANSCRIPTION FACTOR 6 (DOF6)","DOF TRANSCRIPTION FACTOR 6 (DOF6)"]
["AT1G51700","grey","Encodes dof zinc finger protein (adof1). The mRNA is cell-to-cell mobile.","DOF ZINC FINGER PROTEIN 1 (DOF1)","DOF ZINC FINGER PROTEIN 1 (ADOF1);DOF ZINC FINGER PROTEIN 1 (DOF1)"]
["AT5G23780","grey","Member of the plant-specific DUF724 protein family. Arabidopsis has 10 DUF724 proteins. Loss of function mutant has a WT phenotype","DOMAIN OF UNKNOWN FUNCTION 724 9 (DUF9)","DOMAIN OF UNKNOWN FUNCTION 724 9 (ATDUF9);DOMAIN OF UNKNOWN FUNCTION 724 9 (DUF9)"]
["AT5G14620","grey","A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues.","DOMAINS REARRANGED METHYLTRANSFERASE 2 (DRM2)","DOMAINS REARRANGED METHYLTRANSFERASE 2 (DRM2); (DMT7)"]
["AT3G62800","grey","Encodes a nuclear dsRNA-binding protein DRB4 that interacts specifically with DCL4. May regulate DCL4 function and thereby affect miRNA biogenesis. Also has an impact on polymerase IV-dependent siRNA levels. DRB4 interacts with the P6 viral protein from Cauliflower mosaic virus and may be a target of viral silencing suppression.","DOUBLE-STRANDED-RNA-BINDING PROTEIN 4 (DRB4)","DOUBLE-STRANDED-RNA-BINDING PROTEIN 4 (DRB4); (ATTIF3K1)"]
["AT5G17460","grey","glutamyl-tRNA (Gln) amidotransferase subunit C;(source:Araport11)","DROUGHT AND FREEZING RESPONSIVE GENE 1 (DFR1)","DROUGHT AND FREEZING RESPONSIVE GENE 1 (DFR1)"]
["AT1G56280","grey","Encodes a gene whose transcript level in root and leaves increases to progressive drought stress. The increase in transcript level is independent from abscisic acid level. Sequence is not similar to any protein of known function. It appears to be a member of plant-specific gene family. It's phosphorylated by AtCPK11 in a Ca(2+)-dependent manner at Thr105 and Ser107 within the AtDi19 bipartite nuclear localization signal","DROUGHT-INDUCED 19 (DIL9)","DROUGHT-INDUCED LIKE 19 (ATDIL9);DROUGHT-INDUCED 19 (DIL9);DROUGHT-INDUCED 19-1 (DIL9-1)"]
["AT5G41070","grey","Encodes a double-stranded RNA binding protein.","DSRNA-BINDING PROTEIN 5 (DRB5)","DSRNA-BINDING PROTEIN 5 (DRB5)"]
["AT4G03400","grey","Encodes a GH3-related gene involved in red light-specific hypocotyl elongation. Analysis of sense and antisense transgenic plants suggests that DFL2 is located downstream of red light signal transduction and determines the degree of hypocotyl elongation.","DWARF IN LIGHT 2 (DFL2)","DWARF IN LIGHT 2 (DFL2); (GH3-10)"]
["AT2G14120","grey","Encodes a dynamin related protein. DRPs are self-assembling GTPasse involved in fission and fusion of membranes. DRP3B functions in mitochondrion and peroxisome fission in combination with DRP3A.","DYNAMIN RELATED PROTEIN (DRP3B)","DYNAMIN RELATED PROTEIN (DRP3B)"]
["AT1G29710","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","DYW DOMAIN PROTEIN 4 (DYW4)","DYW DOMAIN PROTEIN 4 (DYW4)"]
["AT5G50280","grey","Responsible for chloroplast gene expression and group II intron splicing of several genes. Associated with the expression of ribosomal genes and accumulation of chloroplast ri bosomes. Critically important for early chloroplast development in cotyledon.","EMBRYO DEFECTIVE 1006 (EMB1006)","EARLY CHLOROPLAST DEVELOPMENT 2 (ECD2);EMBRYO DEFECTIVE 1006 (EMB1006)"]
["AT5G01270","grey","Encodes CPL2, a carboxyl-terminal domain (CTD) phosphatase that dephosphorylates CTD Ser5-PO4 of the RNA polymerase II complex. Regulates plant growth, stress and auxin responses.","CARBOXYL-TERMINAL DOMAIN (CTD) PHOSPHATASE-LIKE 2 (CPL2)","ECERIFERUM11 (CER11);CARBOXYL-TERMINAL DOMAIN (CTD) PHOSPHATASE-LIKE 2 (CPL2)"]
["AT3G63060","grey","EDL3 is an F-box protein involved that mediated the regulation of abscisic acid signalling.","EID1-LIKE 3 (EDL3)","EID1-LIKE 3 (EDL3)"]
["AT1G54270","grey","member of eIF4A - eukaryotic initiation factor 4A","EIF4A-2 (EIF4A-2)","EIF4A-2 (EIF4A-2)"]
["AT3G18980","grey","EIN2 targeting protein1;(source:Araport11)","EIN2 TARGETING PROTEIN1 (ETP1)","EIN2 TARGETING PROTEIN1 (ETP1)"]
["AT2G25490","grey","Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. The mRNA is cell-to-cell mobile.","EIN3-BINDING F BOX PROTEIN 1 (EBF1)","EIN3-BINDING F BOX PROTEIN 1 (EBF1); (FBL6)"]
["AT4G38495","grey","Subunit if INO80 chromatin remodeling complex. Along with EIN6 (REF6), redundantly controls the level and the localization of the repressive histone modification H3K27me3 and the histone variant H2A.","EIN6 ENHANCER (EEN)","EIN6 ENHANCER (EEN);ENHANCER OF ETHYLENE INSENSITIVITY (EEN); (EEN)"]
["AT5G09980","grey","elicitor peptide 4 precursor;(source:Araport11)","ELICITOR PEPTIDE 4 PRECURSOR (PROPEP4)","ELICITOR PEPTIDE 4 PRECURSOR (PROPEP4)"]
["AT2G22000","grey","elicitor peptide 6 precursor;(source:Araport11)","ELICITOR PEPTIDE 6 PRECURSOR (PROPEP6)","ELICITOR PEPTIDE 6 PRECURSOR (PROPEP6)"]
["AT4G37990","grey","Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases, this enzyme does not have mannitol dehydrogenase activity.","ELICITOR-ACTIVATED GENE 3-2 (ELI3-2)","ELICITOR-ACTIVATED GENE 3-2 (ELI3-2);ELICITOR-ACTIVATED GENE 3 (ELI3);ARABIDOPSIS THALIANA CINNAMYL-ALCOHOL DEHYDROGENASE 8 (ATCAD8);CINNAMYL-ALCOHOL DEHYDROGENASE B2 (CAD-B2)"]
["AT4G32400","grey","Encodes a plastidial nucleotide uniport carrier protein required to export newly synthesized adenylates into the cytosol.","SODIUM HYPERSENSITIVE 1 (SHS1)","EMBRYO DEFECTIVE 104 (EMB104);SUPPRESSOR OF HIGH STEARATE CONTENT 1 (SHS1);SODIUM HYPERSENSITIVE 1 (SHS1);EMBRYO DEFECTIVE 42 (EMB42);ARABIDOPSIS THALIANA BRITTLE 1 (ATBT1); (BR1)"]
["AT1G49400","grey","Nucleic acid-binding, OB-fold-like protein;(source:Araport11)","EMBRYO DEFECTIVE 1129 (emb1129)","EMBRYO DEFECTIVE 1129 (emb1129);RIBOSOMAL PROTEIN US17M (US17M)"]
["AT1G48850","grey","Flavoenzyme-encoding gene essential for embryo development.","EMBRYO DEFECTIVE 1144 (EMB1144)","EMBRYO DEFECTIVE 1144 (EMB1144)"]
["AT2G31340","grey","embryo defective 1381;(source:Araport11)","EMBRYO DEFECTIVE 1381 (emb1381)","EMBRYO DEFECTIVE 1381 (emb1381)"]
["AT1G80260","grey","Spc97 / Spc98 family of spindle pole body (SBP) component;(source:Araport11)","EMBRYO DEFECTIVE 1427 (emb1427)","EMBRYO DEFECTIVE 1427 (emb1427)"]
["AT2G37920","grey","copper ion transmembrane transporter;(source:Araport11)","EMBRYO DEFECTIVE 1513 (emb1513)","EMBRYO DEFECTIVE 1513 (emb1513)"]
["AT2G03150","grey","Encodes a nuclear-localized calcium-binding protein RSA1 (SHORT ROOT IN SALT MEDIUM 1), which is required for salt tolerance.","SHORT ROOT IN SALT MEDIUM 1 (RSA1)","EMBRYO DEFECTIVE 1579 (emb1579);SHORT ROOT IN SALT MEDIUM 1 (RSA1)"]
["AT1G12770","grey","Encodes a DEAD-box RNA helicase that localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata. The mRNA is cell-to-cell mobile.","EMBRYO DEFECTIVE 1586 (EMB1586)","EMBRYO DEFECTIVE 1586 (EMB1586);INCREASED SIZE EXCLUSION LIMIT 1 (ISE1)"]
["AT2G22870","grey","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","EMBRYO DEFECTIVE 2001 (EMB2001)","EMBRYO DEFECTIVE 2001 (EMB2001); (ENGB-1)"]
["AT3G29290","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)","EMBRYO DEFECTIVE 2076 (emb2076)","EMBRYO DEFECTIVE 2076 (emb2076)"]
["AT1G21390","grey","embryo defective 2170;(source:Araport11)","EMBRYO DEFECTIVE 2170 (emb2170)","EMBRYO DEFECTIVE 2170 (emb2170)"]
["AT2G25660","grey","Translocon at the inner-envelope membrane of chloroplasts which binds to the outer-membrane channel TOC75.","EMBRYO DEFECTIVE 2410 (emb2410)","EMBRYO DEFECTIVE 2410 (emb2410);TRANSLOCON AT THE INNER-ENVELOPE MEMBRANES OF CHLOROPLASTS236 (TIC236)"]
["AT3G48470","grey","embryo defective 2423;(source:Araport11)","EMBRYO DEFECTIVE 2423 (EMB2423)","EMBRYO DEFECTIVE 2423 (EMB2423)"]
["AT5G39680","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)","EMBRYO DEFECTIVE 2744 (EMB2744)","EMBRYO DEFECTIVE 2744 (EMB2744)"]
["AT5G39710","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","EMBRYO DEFECTIVE 2745 (EMB2745)","EMBRYO DEFECTIVE 2745 (EMB2745)"]
["AT4G33990","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","EMBRYO DEFECTIVE 2758 (EMB2758)","EMBRYO DEFECTIVE 2758 (EMB2758)"]
["AT4G36480","grey","Encodes the LCB1 subunit of serine palmitoyltransferase. Together with the LCB2 subunit, forms a functional serine palmitoyltransferase complex, which catalyzes the first reaction of sphingolipid biosynthesis. Knockout of LCB1 was embryo lethal. Partial suppression of LCB1 expression led to smaller plants due to reduced cell expansion.","LONG-CHAIN BASE1 (LCB1)","EMBRYO DEFECTIVE 2779 (EMB2779);FUMONISIN B1 RESISTANT 11 (FBR11);LONG-CHAIN BASE1 (ATLCB1);LONG-CHAIN BASE1 (LCB1)"]
["AT2G02150","grey","Mitochondrial pentatricopeptide repeat protein involved in nad2 mRNA maturation.","EMBRYO DEFECTIVE 2794 (EMB2794)","EMBRYO DEFECTIVE 2794 (EMB2794)"]
["AT1G63700","grey","Member of MEKK subfamily, a component of the stomatal development regulatory pathway. Mutations in this locus result in embryo lethality.","YODA (YDA)","EMBRYO DEFECTIVE 71 (EMB71);YODA (YDA);MAP KINASE KINASE KINASE 4 (MAPKKK4)"]
["AT2G03050","grey","A locus involved in embryogenesis. Mutations in this locus result in embryo lethality.","EMBRYO DEFECTIVE 93 (EMB93)","EMBRYO DEFECTIVE 93 (EMB93);SINGLET OXYGEN-LINKED DEATH ACTIVATOR 10 (SOLDAT10)"]
["AT5G05920","grey","Encodes a deoxyhypusine synthase.","DEOXYHYPUSINE SYNTHASE (DHS)","EMBRYO SAC DEVELOPMENT ARREST 22 (EDA22);DEOXYHYPUSINE SYNTHASE (DHS)"]
["AT5G11530","grey","Involved in regulating reproductive development . Part of PcG like complex mediating floral gene expression repression including AG.","EMBRYONIC FLOWER 1 (EMF1)","EMBRYONIC FLOWER 1 (EMF1)"]
["AT5G64360","grey","EIP9 interacts with EMF1 to regulate flowering. It functions partially redundantly with SDJ2 and SDJ3 and interacts with SUVH1 and SUVH3 to form a SUVH-SDJ complex. The complex binds promoters with DNA methylation and mediates transcriptional activation of promoter methylated genes.","EMF1-INTERACTING PROTEIN 9 (EIP9)","EMF1-INTERACTING PROTEIN 9 (EIP9);SUVH1/3-INTERACTING DNAJ DOMAIN-CONTAINING PROTEIN 1 (SDJ1); (DNAJ1)"]
["AT1G18260","grey","Encodes an Arabidopsis homolog of the yeast Hrd3/mammlian Sel1L protein. Involved in ERAD (Endoplasmic reticulum-associated degradation).","EMS-MUTAGENIZED BRI1 SUPPRESSOR 5 (EBS5)","EMS-MUTAGENIZED BRI1 SUPPRESSOR 5 (EBS5); (HRD3A)"]
["AT1G05900","grey","endonuclease III 2;(source:Araport11)","ENDONUCLEASE III 2 (NTH2)","ENDONUCLEASE III 2 (NTH2); (ATNTH2)"]
["AT1G67400","grey","Member of the ELMOD family.","ENGULFMENT AND CELL MOTILITY (ELMO) DOMAIN C (ELMOD_C)","ENGULFMENT AND CELL MOTILITY (ELMO) DOMAIN C (ELMOD_C)"]
["AT4G19040","grey","Encodes a PH and START domain-containing protein that mediates resistance to pathogenic fungi. Resistance requires salicylic acid signalling. Mutants are resistant to E. cichoracearum. Expressed throughout plant tissues and possibly localized to membranes /mitochondrion.","ENHANCED DISEASE RESISTANCE 2 (EDR2)","ENHANCED DISEASE RESISTANCE 2 (EDR2)"]
["AT1G05970","grey","Anti-silencing factor. Forms a complex with ASI1-EDM2 that is required for expression of some nonintronic HC-TRE genes","ASI1-IMMUNOPRECIPITATED PROTEIN 1 (AIPP1)","ENHANCED DOWNY MILDEW 3 (EDM3);ASI1-IMMUNOPRECIPITATED PROTEIN 1 (AIPP1)"]
["AT3G12680","grey","Member of the floral homeotic AGAMOUS pathway.","ENHANCER OF AG-4 1 (HUA1)","ENHANCER OF AG-4 1 (HUA1); (ATC3H37)"]
["AT1G16690","grey","Scaffold protein of Nucleosomal acetyltransferase of H4 (NuA4), which is an essential transcriptional coactivator in eukaryotes. Necessary for nucleosomal acetylation of histones H4 and H2A.Z by NuA4 in vitro.","ENHANCER OF POLYCOMB-LIKE 1 A (EPL1A)","ENHANCER OF POLYCOMB-LIKE 1 A (EPL1A)"]
["AT5G10810","grey","enhancer of rudimentary homolog ATER","ENHANCER OF RUDIMENTARY HOMOLOGUE (ER)","ENHANCER OF RUDIMENTARY HOMOLOGUE (ER);ARABIDOPSIS THALIANA ENHANCER OF RUDIMENTARY HOMOLOGUE (ATER)"]
["AT4G16210","grey","enoyl-CoA hydratase/isomerase A;(source:Araport11)","ENOYL-COA HYDRATASE/ISOMERASE A (ECHIA)","ENOYL-COA HYDRATASE/ISOMERASE A (ECHIA);ENOYL-COA HYDRATASE 2 (E-COAH-2)"]
["AT3G20290","grey","Encodes AtEHD1, one of the Arabidopsis Eps15 homology domain proteins involved in endocytosis (AtEHD2, At4g05520).","EPS15 HOMOLOGY DOMAIN 1 (EHD1)","EPS15 HOMOLOGY DOMAIN 1 (ATEHD1);EPS15 HOMOLOGY DOMAIN 1 (EHD1)"]
["AT1G19400","grey","Tail-anchored (TA) OEP membrane protein which possesses a single C-terminal transmembrane domain targeting post-translationally to plastids.","ERYTHRONATE-4PHOSPHATE DEHYDROGENASE (E-4PDHASE)","ERYTHRONATE-4PHOSPHATE DEHYDROGENASE (E-4PDHASE)"]
["AT1G20900","grey","Encodes an AT hook domain containing protein that acts redundantly with SOB3 to modulate hypocotyl growth inhibition in response to light.","AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 27 (AHL27)","ESCAROLA (ESC);ORESARA 7 (ORE7);AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 27 (AHL27)"]
["AT4G29960","grey","EBS7 encodes a plant specific, endoplasmic reticulum localized protein that is involved in endoplasmic reticulum-associated degradation (ERAD). It interacts with the ERAD component AtHRD1a and may regulate HRD1a stability. Identified in a screen for supressors of a mutation in bri1 that causes bri1 to be retained in the ER. Loss of EBS7 function restores BR sensitivity in the bri1-9 mutant allele.","ETHYL METHANESULFONATE-MUTAGENIZED BRASSINOSTEROID- INSENSITIVE 1 SUPPRESSOR 7 (EBS7)","ETHYL METHANESULFONATE-MUTAGENIZED BRASSINOSTEROID- INSENSITIVE 1 SUPPRESSOR 7 (EBS7)"]
["AT5G09410","grey","calmodulin-binding protein, similar to another ethylene-upregulated calmodulin-binding protein ER1 GI:11612392 from (Nicotiana tabacum)","ETHYLENE INDUCED CALMODULIN BINDING PROTEIN (EICBP.B)","ETHYLENE INDUCED CALMODULIN BINDING PROTEIN (EICBP.B)"]
["AT5G03280","grey","Involved in ethylene signal transduction. Acts downstream of CTR1. Positively regulates ORE1 and negatively regulates mir164A,B,C to regulate leaf senescence. A maternally expressed imprinted gene. Mutations in ein2 block ethylene stimulation of flavonol synthesis. The mRNA is cell-to-cell mobile.","ETHYLENE INSENSITIVE 2 (EIN2)","ETHYLENE INSENSITIVE 2 (EIN2); (PIR2);CYTOKININ RESISTANT 1 (CKR1); (ATEIN2);ORESARA 3 (ORE3);ORESARA 2 (ORE2);ENHANCED RESPONSE TO ABA3 (ERA3)"]
["AT3G51770","grey","Encodes a negative regulator of 1-aminocyclopropane-1-carboxylic acid synthase5(ACS5), which catalyze the rate-limiting step in ethylene biosynthesis. ETO1 directly interacts with ACS5 and inhibits its enzyme activity and targets it for degradation via proteasome-dependent pathway. It also interacts with CUL3 (a component of ubiquitin ligase complexes). eto1 (and eto3) mutations elevate ethylene biosynthesis by affecting the posttranscriptional regulation of ACS","ETHYLENE OVERPRODUCER 1 (ETO1)","ETHYLENE OVERPRODUCER 1 (ETO1)"]
["AT3G23150","grey","Involved in ethylene perception in Arabidopsis The mRNA is cell-to-cell mobile.","ETHYLENE RESPONSE 2 (ETR2)","ETHYLENE RESPONSE 2 (ETR2)"]
["AT3G23240","grey","encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.","ETHYLENE RESPONSE FACTOR 1 (ERF1)","ETHYLENE RESPONSE FACTOR 1 (ERF1);ETHYLENE RESPONSE FACTOR 1 (ATERF1); (ERF1B); (ATERF#092)"]
["AT5G61600","grey","encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Involved in regulating root architecture.","ETHYLENE RESPONSE FACTOR 104 (ERF104)","ETHYLENE RESPONSE FACTOR 104 (ERF104)"]
["AT5G47220","grey","Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box?dependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.","ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2 (ERF2)","ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2 (ATERF2);ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2 (ERF2);ETHYLENE RESPONSE FACTOR- 2 (ATERF-2)"]
["AT3G56150","grey","member of eIF3c - eukaryotic initiation factor 3c","EUKARYOTIC TRANSLATION INITIATION FACTOR 3C (EIF3C)","EUKARYOTIC TRANSLATION INITIATION FACTOR 3C (EIF3C); (ATEIF3C-1); (EIF3C-1); (ATTIF3C1); (TIF3C1)"]
["AT4G18040","grey","eIF4E protein. The cum1 mutation affects the local spreading of CMV within the inoculated leaf, delaying accumulation of cucumber mosaic virus coat protein.","EUKARYOTIC TRANSLATION INITIATION FACTOR 4E (EIF4E)","EUKARYOTIC TRANSLATION INITIATION FACTOR 4E (EIF4E);CUCUMOVIRUS MULTIPLICATION 1 (CUM1);ARABIDOPSIS THALIANA EUKARYOTIC TRANSLATION INITATION FACTOR 4E1 (AT.EIF4E1);EUKARYOTIC TRANSLATION INITIATION FACTOR 4E1 (eIF4E1)"]
["AT2G39050","grey","Encodes a nucleocytoplasmic lectin that is capable of binding carbohydrates. It is involved in ABA mediated stomatal movement and increased expression is correlated with increased resistance to Pseudomonas syringae.","EUONYMUS LECTIN S3 (EULS3)","EUONYMUS LECTIN S3 (EULS3); (ARATHEULS3)"]
["AT3G17330","grey","evolutionarily conserved C-terminal region 6;(source:Araport11)","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 6 (ECT6)","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 6 (ECT6)"]
["AT1G79270","grey","evolutionarily conserved C-terminal region 8;(source:Araport11)","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 8 (ECT8)","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 8 (ECT8)"]
["AT1G47560","grey","Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.","EXOCYST COMPLEX COMPONENT SEC3B (SEC3B)","EXOCYST COMPLEX COMPONENT SEC3B (SEC3B)"]
["AT1G76850","grey","Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion. The mRNA is cell-to-cell mobile.","EXOCYST COMPLEX COMPONENT SEC5 (SEC5A)","EXOCYST COMPLEX COMPONENT SEC5 (SEC5A)"]
["AT1G31930","grey","Encodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses.","EXTRA-LARGE GTP-BINDING PROTEIN 3 (XLG3)","EXTRA-LARGE GTP-BINDING PROTEIN 3 (XLG3)"]
["AT1G35530","grey","Encodes FANCM, a highly conserved helicase that functions as a major factor limiting meiotic crossover formation. It is not directly involved in the repair of DNA lesions but suppresses spontaneous somatic homologous recombination via a RecQ helicase (At-RECQ4A)-independent pathway.","FANCONI ANEMIA COMPLEMENTATION GROUP M (FANCM)","FANCONI ANEMIA COMPLEMENTATION GROUP M (FANCM); (AT-FANCM)"]
["AT3G60310","grey","Component of Fanconi anemia (FA) complex.","FANCONI ANEMIA COMPLEX PROTEIN C (FANCC)","FANCONI ANEMIA COMPLEX PROTEIN C (FANCC)"]
["AT4G29560","grey","Component of Fanconi anemia (FA) complex.","FANCONI ANEMIA COMPLEX PROTEIN E (FANCE)","FANCONI ANEMIA COMPLEX PROTEIN E (FANCE)"]
["AT4G19990","grey","FAR1-related sequence 1;(source:Araport11)","FAR1-RELATED SEQUENCE 1 (FRS1)","FAR1-RELATED SEQUENCE 1 (FRS1)"]
["AT1G10240","grey","FAR1-related sequence 11;(source:Araport11)","FAR1-RELATED SEQUENCE 11 (FRS11)","FAR1-RELATED SEQUENCE 11 (FRS11)"]
["AT5G18960","grey","Transcriptional repressor that accumulates in short-day conditions. Regulates together with FRS7 and NINJA glucosinolate biosynthesis.","FAR1-RELATED SEQUENCE 12 (FRS12)","FAR1-RELATED SEQUENCE 12 (FRS12)"]
["AT3G59470","grey","Encodes one of four FRS (FAR1-RELATED SEQUENCE) factor-like genes in Arabidopsis. FRS factors are characterized by having an N-terminal C2H2-type chelating motif of the WRKY- Glial Cell Missing1 family, a central core transposase domain of Mutator-like element transposases, and a C-terminal SWIM domain. The four FRF-like genes in Arabidopsis share only the N-terminal motif with FRS proteins. FRF1 has been shown to bind the RB-box in vitro. The RB-box contributes to restricting SHOOTMERISTEMLESS expression to the shoot apical meristem.","FAR1-RELATED SEQUENCES-RELATED FACTOR1 (FRF1)","FAR1-RELATED SEQUENCES-RELATED FACTOR1 (FRF1)"]
["AT2G24250","grey","LOW protein: F-box/kelch-repeat protein (DUF295);(source:Araport11)","F-BOX/DUF295 ANCESTRAL 14 (ATFDA14)","F-BOX/DUF295 ANCESTRAL 14 (ATFDA14)"]
["AT1G27580","grey","F-box protein (DUF295);(source:Araport11)","F-BOX/DUF295 BRASSICEAE-SPECIFIC 4 (ATFDB4)","F-BOX/DUF295 BRASSICEAE-SPECIFIC 4 (ATFDB4)"]
["AT5G11460","grey","FCS like zinc finger 10 is induced during energy starvation through SnRK1 signaling. Mutants accumulate more SnRK1alpha1 which results in the inhibition of seedling growth under favorable growth conditions. Increased SnRK1 activity in the mutant also results in the downregulation of TOR signaling (DOI:10.1111/tpj.13854).","FCS LIKE ZINC FINGER 10 (FLZ10)","FCS LIKE ZINC FINGER 10 (FLZ10)"]
["AT1G15140","grey","oxidoreductase located in chloroplast","FERREDOXIN-NADP(+) OXIDOREDUCTASE -LIKE (FNRL)","FERREDOXIN-NADP(+) OXIDOREDUCTASE -LIKE (FNRL)"]
["AT2G40300","grey","Encodes FERRITIN 4, AtFER4. Ferritins are a class of 24-mer multi-meric proteins found in all kingdoms of life. Function as the main iron store in mammals. Evidence suggests that Arabidopsis ferritins are essential to protect cells against oxidative damage, but they do not constitute the major iron pool. Localize to mitochondria. Knock out mutants are not sensitive to abiotic stress.","FERRITIN 4 (FER4)","FERRITIN 4 (ATFER4);FERRITIN 4 (FER4)"]
["AT2G30766","grey","Functions in iron homeostasis, activates iron deficiency response genes such as bHLH38, bHLH39, IRT1, and FRO2.","FE-UPTAKE-INDUCING PEPTIDE1 (FEP1)","FE-UPTAKE-INDUCING PEPTIDE1 (FEP1);IRONMAN 3 (IMA3)"]
["AT1G47395","grey","Involved in regulation of iron deficiency response genes.","FE-UPTAKE-INDUCING PEPTIDE2 (FEP2)","FE-UPTAKE-INDUCING PEPTIDE2 (FEP2);IRONMAN 2 (IMA2)"]
["AT4G04020","grey","Fibrillin precursor protein. The fibrillin preprotein, but not the mature protein interacts with ABI2. Regulated by abscisic acid response regulators. Involved in abscisic acid-mediated photoprotection. The mRNA is cell-to-cell mobile.","FIBRILLIN (FIB)","FIBRILLIN (FIB);PLASTOGLOBULIN 35 (PGL35);FIBRILLIN 1A (FIB1A)"]
["AT4G22240","grey","Involved in photoprotection of photosystem II. The RVSI and twin-positive motifs in the transit peptide are necessary for efficient leucoplast import of prFB.","FIBRILLIN 1B (FBN1B)","FIBRILLIN 1B (FBN1B)"]
["AT5G53450","grey","FBN11 contains a lipid-binding FBN domain and a kinase domain. It is induced by osmotic stress and loss of function mutants show decreased germination when grown under osmotic stress conditions.","OBP3-RESPONSIVE GENE 1 (ORG1)","FIBRILLIN11 (FBN11);OBP3-RESPONSIVE GENE 1 (ORG1)"]
["AT1G04650","grey","FLIP is a member of a conserved gene family with wide distribution across taxa. In Arabidopsis, it forms a complex with FIGL1 regulates meiotic crossover formation via RAD51 and DMC1.","FIDGETIN-LIKE-1 INTERACTING PROTEIN (FLIP)","FIDGETIN-LIKE-1 INTERACTING PROTEIN (FLIP)"]
["AT5G46330","grey","Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB. The mRNA is cell-to-cell mobile.","FLAGELLIN-SENSITIVE 2 (FLS2)","FLAGELLIN-SENSITIVE 2 (FLS2)"]
["AT5G14540","grey","basic salivary proline-rich-like protein (DUF1421);(source:Araport11)","FLOE2 (FLOE2)","FLOE2 (FLOE2)"]
["AT3G22810","grey","FORKED-LIKE family member, part of Group 1 (FKD1, FL1-FL3; Group 2 consists of FL4 and FL8 and Group 3 consists of FL5- FL7). May coordinate leaf size with vein density, where Group 1 members and Group 3 members have opposing functions.","FORKED-LIKE2 (FL2)","FORKED-LIKE2 (FL2)"]
["AT2G36460","grey","Fructose 1,6-bisphosphate aldolase.","FRUCTOSE-BISPHOSPHATE ALDOLASE 6 (FBA6)","FRUCTOSE-BISPHOSPHATE ALDOLASE 6 (FBA6)"]
["AT1G71990","grey","This gene encodes a Lewis-type alpha 1,4-fucosyltransferase","FUCOSYLTRANSFERASE 13 (FUT13)","FUCOSYLTRANSFERASE 13 (FUT13); (ATFUT13); (FUCTC); (FT4-M);ARABIDOPSIS FUCOSYLTRANSFERASE 4 (ATFT4)"]
["AT5G23790","grey","Predicted to encode a galactinol synthase.","GALACTINOL SYNTHASE 5 (GolS5)","GALACTINOL SYNTHASE 5 (GolS5);GALACTINOL SYNTHASE 5 (AtGolS5)"]
["AT3G01040","grey","Encodes a protein with putative galacturonosyltransferase activity.","GALACTURONOSYLTRANSFERASE 13 (GAUT13)","GALACTURONOSYLTRANSFERASE 13 (GAUT13)"]
["AT4G38270","grey","Encodes a protein with putative galacturonosyltransferase activity.","GALACTURONOSYLTRANSFERASE 3 (GAUT3)","GALACTURONOSYLTRANSFERASE 3 (GAUT3)"]
["AT1G08000","grey","Encodes a member of the GATA factor family of zinc finger transcription factors.","GATA TRANSCRIPTION FACTOR 10 (GATA10)","GATA TRANSCRIPTION FACTOR 10 (GATA10)"]
["AT5G10450","grey","Encodes a member of the 14-3-3 gene family that is a lambda isoform (14-3-3&#955;). Interacts with APX3 (ascorbate peroxidase) and AKR2 , suggesting a role in mediating oxidative metabolism in stress response. This protein was shown to colocalize and interact with SERK1 by which it is phosphorylated. This protein is also reported to interact with the phosphorylated form of the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1. Interacts with JAZ10.4 which lacks the Jas motif. It is also phosphorylated by CRPK1 as part of the response to cold and translocates to the nucleus after phosphorylation.","G-BOX REGULATING FACTOR 6 (GRF6)","G-BOX REGULATING FACTOR 6 (GRF6)"]
["AT2G06025","grey","Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11)","GCN5&#8208;RELATED N&#8208;ACETYLTRANSFERASE 6 (GNAT6)","GCN5&#8208;RELATED N&#8208;ACETYLTRANSFERASE 6 (GNAT6)"]
["AT5G65280","grey","Encodes a protein with reported similarity to GCR2 a putative G protein coupled receptor thought to be an ABA receptor. Loss of function mutations in GCL1 show no ABA response defects based on assays of seed germination and seedling development.GCL1 also has similarity to LANCL1 and LANCL2, human homologs of bacterial lanthionine synthetase.","GCR2-LIKE 1 (GCL1)","GCR2-LIKE 1 (GCL1)"]
["AT4G26850","grey","Encodes a novel protein involved in ascorbate biosynthesis, which was shown to catalyze the transfer of GMP from GDP-galactose to a variety of hexose-1-phosphate acceptors. Recessive mutation has a reduced amount of vitamin C, lower level of non-photochemical quenching, and reduced rate of conversion of violaxanthin to zeaxanthin in high light.","VITAMIN C DEFECTIVE 2 (VTC2)","GDP-L-GALACTOSE PHOSPHORYLASE (GGP);VITAMIN C DEFECTIVE 2 (VTC2)"]
["AT5G13200","grey","Encodes a protein with unknown function that is involved in hormone mediated regulation of seed germination/dormancy.","GEM-RELATED 5 (GER5)","GEM-RELATED 5 (GER5)"]
["AT5G18610","grey","Encodes a receptor-like cytoplasmic kinase that is an immediate downstream component of the chitin receptor CERK1 and contributes to the regulation of chitin-induced immunity.","(PBL27)","GENERAL CONTROL NONREPRESSED 2 (GCN2); (PBL27)"]
["AT3G52280","grey","Bromodomain containing nuclear-localized protein involved in leaf development. GTE6 binds to the promoter and intron of AS1 and regulates its expression via histone acetylation.","GENERAL TRANSCRIPTION FACTOR GROUP E6 (GTE6)","GENERAL TRANSCRIPTION FACTOR GROUP E6 (GTE6)"]
["AT4G34540","grey","Encodes a protein whose sequence is similar to pinoresinol-lariciresinol reductase from pine. Plays a positive role in developmental and dark -induced leaf senescence.","GENETIC VARIANTS IN LEAF SENESCENCE (GVS1)","GENETIC VARIANTS IN LEAF SENESCENCE (GVS1)"]
["AT1G49530","grey","encodes a mitochondria-targeted geranylgeranyl pyrophosphate synthase","GERANYLGERANYL PYROPHOSPHATE SYNTHASE 6 (GGPS6)","GERANYLGERANYL PYROPHOSPHATE SYNTHASE 6 (GGPS6); (GFPPS3);GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1 (GGPPS1)"]
["AT1G09560","grey","Encodes a plasodesmata-located protein involved in regulating primary root growth by controlling phloem-mediated allocation of resources between the primary and lateral root meristems. The mRNA is cell-to-cell mobile.","GERMIN-LIKE PROTEIN 5 (GLP5)","GERMIN-LIKE PROTEIN 5 (GLP5);PLASMODESMAL GERMIN-LIKE PROTEIN 1 (PDGLP1)"]
["AT1G30040","grey","Encodes a gibberellin 2-oxidase that acts on C-19 gibberellins. AtGA2OX2 expression is responsive to cytokinin and KNOX activities.","GIBBERELLIN 2-OXIDASE (GA2OX2)","GIBBERELLIN 2-OXIDASE (ATGA2OX2);GIBBERELLIN 2-OXIDASE (GA2OX2);GIBBERELLIN 2-OXIDASE 2 (GA2OX2)"]
["AT1G30540","grey","Actin-like ATPase superfamily protein;(source:Araport11)","GLCNAC KINASE (GNK)","GLCNAC KINASE (GNK)"]
["AT5G45600","grey","The GSA41 human homolog is expressed in nuclei and binds NuMA, a component of the nuclear matrix in interphase nuclei. It negatively regulates flowering by controlling the H4 acetylation levels in the FLC and FT chromatin.","GLIOMAS 41 (GAS41)","GLIOMAS 41 (GAS41);TBP-ASSOCIATED FACTOR 14B (TAF14b);HOMOLOG OF YEAST YAF9 A (YAF9A)"]
["AT2G41760","grey","Controls the expression of specific defence-response genes, activates the synthesis pathway for the phytoalexin camalexin and influences basal resistance to Pseudomonas syringae pv tomato (Pst).","GLN-SPECIFIC AMINO-TERMINAL (NT)-AMIDASE (NTAQ1)","GLN-SPECIFIC AMINO-TERMINAL (NT)-AMIDASE (NTAQ1)"]
["AT5G65630","grey","This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE7 show some resistance to agrobacterium-mediated root transformation.","GLOBAL TRANSCRIPTION FACTOR GROUP E7 (GTE7)","GLOBAL TRANSCRIPTION FACTOR GROUP E7 (GTE7)"]
["AT2G31960","grey","encodes a protein similar to callose synthase","GLUCAN SYNTHASE-LIKE 3 (GSL03)","GLUCAN SYNTHASE-LIKE 3 (ATGSL03); (GSL03); (ATGSL3);GLUCAN SYNTHASE-LIKE 3 (GSL03)"]
["AT2G36850","grey","Encodes GSL8, a member of the Glucan Synthase-Like (GSL) family believed to be involved in the synthesis of the cell wall component callose. GSL8 is required for male gametophyte development and plant growth. Has a role in entry of microspores into mitosis. Also refer to GSL10 (At3g07160). Required for the function and plasmodesmal localization of PDLP5.","GLUCAN SYNTHASE-LIKE 8 (GSL8)","GLUCAN SYNTHASE-LIKE 8 (ATGSL08);GLUCAN SYNTHASE-LIKE 8 (GSL8); (gsl08); (atgsl8);CHORUS (CHOR);ENLARGED TETRAD 2 (ET2);MASSUE (MAS); (CALS10)"]
["AT3G27300","grey","Glucose-6-phosphate dehydrogenase. 5Alternative splice forms At3g27300.4 and At3g27300.5 encode N-terminally extended proteoforms which localise at the cytosolic face of the endoplasmic reticulum (PMID:36119606).","GLUCOSE-6-PHOSPHATE DEHYDROGENASE 5 (G6PD5)","GLUCOSE-6-PHOSPHATE DEHYDROGENASE 5 (G6PD5)"]
["AT5G61250","grey","Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-&#946;-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be secreted.","GLUCURONIDASE 1 (GUS1)","GLUCURONIDASE 1 (GUS1);GLUCURONIDASE 1 (AtGUS1)"]
["AT1G42540","grey","Encodes a member of a putative ligand-gated ion channel subunit family. Amino-acid-dependent activation of this channel and systemic responses require a functional ligand-binding domain.","GLUTAMATE RECEPTOR 3.3 (GLR3.3)","GLUTAMATE RECEPTOR 3.3 (GLR3.3); (ATGLR3.3)"]
["AT1G02930","grey","Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).","GLUTATHIONE S-TRANSFERASE 6 (GSTF6)","GLUTATHIONE S-TRANSFERASE 1 (GST1);GLUTATHIONE S-TRANSFERASE (ATGSTF6);EARLY RESPONSIVE TO DEHYDRATION 11 (ERD11);GLUTATHIONE S-TRANSFERASE 6 (GSTF6);ARABIDOPSIS GLUTATHIONE S-TRANSFERASE 1 (ATGST1);ARABIDOPSIS THALIANA GLUATIONE S-TRANSFERASE F3 (ATGSTF3)"]
["AT2G29450","grey","Encodes a member of the TAU glutathione S-transferase gene family. Gene expression is induced by exposure to auxin, pathogen and herbicides. Naming convention according to Wagner et al. (2002)","GLUTATHIONE S-TRANSFERASE TAU 5 (GSTU5)","GLUTATHIONE S-TRANSFERASE TAU 5 (ATGSTU5);ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 1 (ATGSTU1); (AT103-1A);GLUTATHIONE S-TRANSFERASE TAU 5 (GSTU5)"]
["AT1G27130","grey","Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). GSTU13 acts in the pathogen triggered pathway for indole glucosinolate metabolisms that involves also PENETRATION2 myrosinase. It is likely the enzyme that conjugates GSH with unstable indol-3-ylmethyl-ITCs formed upon PEN2-mediated IG hydrolysis, particularly in the branch of this pathway in which 4-substituted IGs are processed.","GLUTATHIONE S-TRANSFERASE TAU 13 (GSTU13)","GLUTATHIONE S-TRANSFERASE TAU 13 (ATGSTU13);GLUTATHIONE S-TRANSFERASE TAU 13 (GSTU13);GLUTATHIONE S-TRANSFERASE 12 (GST12)"]
["AT1G53680","grey","Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","GLUTATHIONE S-TRANSFERASE TAU 28 (GSTU28)","GLUTATHIONE S-TRANSFERASE TAU 28 (ATGSTU28);GLUTATHIONE S-TRANSFERASE TAU 28 (GSTU28)"]
["AT5G41210","grey","Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002).","GLUTATHIONE S-TRANSFERASE THETA 1 (GSTT1)","GLUTATHIONE S-TRANSFERASE THETA 1 (ATGSTT1);GLUTATHIONE S-TRANSFERASE THETA 1 (GSTT1);GLUTATHIONE S-TRANSFERASE TAU 12 (GSTU12); (GST10)"]
["AT5G41220","grey","Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002).","GLUTATHIONE S-TRANSFERASE THETA 3 (GSTT3)","GLUTATHIONE S-TRANSFERASE THETA 3 (ATGSTT3);GLUTATHIONE S-TRANSFERASE THETA 3 (GSTT3); (GST10C)"]
["AT3G24170","grey","Encodes a cytosolic glutathione reductase.","GLUTATHIONE-DISULFIDE REDUCTASE (GR1)","GLUTATHIONE-DISULFIDE REDUCTASE (ATGR1);GLUTATHIONE-DISULFIDE REDUCTASE (GR1)"]
["AT1G80380","grey","encodes a glycerate kinase which catalyzes the last step of photorespiration C2 cycle.","GLYCERATE KINASE (GLYK)","GLYCERATE KINASE (GLYK)"]
["AT4G17550","grey","Encodes a member of the phosphate starvation-induced glycerol-3-phosphate permease gene family: AT3G47420(G3Pp1), AT4G25220(G3Pp2), AT1G30560(G3Pp3), AT4G17550(G3Pp4) and AT2G13100(G3Pp5).","GLYCEROL-3-PHOSPHATE PERMEASE 4 (G3Pp4)","GLYCEROL-3-PHOSPHATE PERMEASE 4 (AtG3Pp4);GLYCEROL-3-PHOSPHATE PERMEASE 4 (G3Pp4)"]
["AT1G71340","grey","Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family.","GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 4 (GDPD4)","GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 4 (GDPD4); (AtGDPD4)"]
["AT1G18630","grey","encodes a glycine-rich RNA binding protein.","RNA-BINDING GLYCINE-RICH PROTEIN A1 (RBGA1)","GLYCINE-RICH RNA-BINDING PROTEIN 6 (GR-RBP6);RNA-BINDING GLYCINE-RICH PROTEIN A1 (RBGA1);RIBOSOMAL PROTEIN MS86 (MS86)"]
["AT4G18360","grey","Encodes a glycolate oxidase that modulates reactive oxygen species-mediated signal transduction during nonhost resistance.","GLYCOLATE OXIDASE 3 (GOX3)","GLYCOLATE OXIDASE 3 (GOX3)"]
["AT2G45270","grey","Mitochondrial protein essential for embryo development.","GLYCOPROTEASE 1 (GCP1)","GLYCOPROTEASE 1 (GCP1)"]
["AT2G43430","grey","Encodes a predicted mitochondrial glyoxalase GLX2-1. Studies using recombinant protein show that GLX2-1 contains a dinuclear metal binding site, but does not have glyoxalase 2 activity. Required for abiotic stress but not for normal plant growth.","GLYOXALASE 2-1 (GLX2-1)","GLYOXALASE 2-1 (GLX2-1);GLYOXALASE II (GLY1); (GLYII4)"]
["AT2G46180","grey","This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC4 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (169 aa) portion of the protein.","GOLGIN CANDIDATE 4 (GC4)","GOLGIN CANDIDATE 4 (GC4)"]
["AT3G27530","grey","This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC6 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (225 aa) portion of the protein.","GOLGIN CANDIDATE 6 (GC6)","GOLGIN CANDIDATE 6 (GC6);MAIGO 4 (MAG4)"]
["AT3G30350","grey","Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).","ROOT MERISTEM GROWTH FACTOR 4 (RGF4)","GOLVEN 3 (GLV3);ROOT MERISTEM GROWTH FACTOR 4 (RGF4)"]
["AT1G64990","grey","Encodes a GPCR-type G protein receptor with nine predicted transmembrane domains. The protein binds abscisic acid (ABA) and is predicted to function as an ABA receptor. It has GTP-binding and GTPase activity and binds to ABA more effectively in the presence of GDP. GTG1 binds to GPA1, the alpha subunit of the heterotrimeric G protein. GPA1 (in its GTP-bound state) affects the GTP binding and GTPase activity of GTG1 and may act to down-regulate GTG1 binding to ABA. GTG1 is widely expressed throughout the plant and appears to be involved in the regulation of several ABA-dependent responses including seed germination, plant development, and promotion of stomatal closure. GTG1 transcript levels do not appear to change in response to ABA or abiotic stresses.","GPCR-TYPE G PROTEIN 1 (GTG1)","GPCR-TYPE G PROTEIN 1 (GTG1)"]
["AT3G22942","grey","heterotrimeric G-protein gamma subunit 2(AGG2)","G-PROTEIN GAMMA SUBUNIT 2 (AGG2)","G-PROTEIN GAMMA SUBUNIT 2 (AGG2); (AtGG2)"]
["AT1G55325","grey","Encodes the Arabidopsis homolog of the transcriptional regulator MED13, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation.","GRAND CENTRAL (GCT)","GRAND CENTRAL (GCT);MACCHI-BOU 2 (MAB2);MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13 (MED13)"]
["AT2G26890","grey","GRV2 has sequence similarity to the C. elegans protein RME-8 which is involved in endocytosis. grv2 mutants result in a reduction in gravitropic response in hypocotyls and shoots but do not affect root gravitropism. The mutants are defective in amyloplast sedimentation.","GRAVITROPISM DEFECTIVE 2 (GRV2)","GRAVITROPISM DEFECTIVE 2 (GRV2);KATAMARI2 (KAM2); (SGR8);MODIFIED TRANSPORT TO THE VACUOLE 12 (MTV12)"]
["AT3G54660","grey","Encodes glutathione reductase that is most likely localized in the chloroplast. Flavoenzyme-encoding gene.","GLUTATHIONE REDUCTASE (GR)","GRISEA 2 (GR2);GLUTATHIONE REDUCTASE (GR); (EMB2360); (ATGR2); (MIAO)"]
["AT4G32430","grey","GRS1 is a mitochondrial PLS-type PRR protein required for RNA editing and plant development.","GROWING SLOWLY 1 (GRS1)","GROWING SLOWLY 1 (GRS1)"]
["AT2G22840","grey","Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower","GROWTH-REGULATING FACTOR 1 (GRF1)","GROWTH-REGULATING FACTOR 1 (AtGRF1);GROWTH-REGULATING FACTOR 1 (GRF1)"]
["AT3G57550","grey","guanylate kinase","GUANYLATE KINASE (AGK2)","GUANYLATE KINASE (AGK2);GUANYLATE KINAS 2 (GK-2)"]
["AT2G18960","grey","Encodes a plasma membrane proton ATPase. Mutants have a reduced ability to close their stomata in response to drought and are affected in stomatal but not seed responsiveness to ABA. The mRNA is cell-to-cell mobile.","H(+)-ATPASE 1 (HA1)","H(+)-ATPASE 1 (AHA1);PLASMA MEMBRANE PROTON ATPASE (PMA);OPEN STOMATA 2 (OST2);H(+)-ATPASE 1 (HA1)"]
["AT3G42640","grey","H[+]-ATPase 8;(source:Araport11)","H(+)-ATPASE 8 (HA8)","H(+)-ATPASE 8 (AHA8);H(+)-ATPASE 8 (HA8)"]
["AT1G06840","grey","Homomultimers interact with cytoplasmic signaling molecule PBL27, resulting in herbivory resistance, in an ethylene-dependent manner.","HDS-ASSOCIATED RLK1 (HAK1)","HDS-ASSOCIATED RLK1 (HAK1)"]
["AT3G13860","grey","heat shock protein 60-3A;(source:Araport11)","HEAT SHOCK PROTEIN 60-3A (HSP60-3A)","HEAT SHOCK PROTEIN 60-3A (HSP60-3A)"]
["AT5G56010","grey","A member of heat shock protein 90 (HSP90) gene family. Expressed in all tissues and abundant in root apical meristem, pollen and tapetum. Expression is NOT heat-induced but induced by IAA and NaCl. Overexpression reduced tolerance to heat and conferred higher tolerance to calcium. The mRNA is cell-to-cell mobile.","HEAT SHOCK PROTEIN 81-3 (HSP81-3)","HEAT SHOCK PROTEIN 90.3 (AtHsp90.3);HEAT SHOCK PROTEIN 90-3 (AtHsp90-3);HEAT SHOCK PROTEIN 81-3 (HSP81-3);HEAT SHOCK PROTEIN 81.3 (Hsp81.3)"]
["AT5G62020","grey","member of Heat Stress Transcription Factor (Hsf) family The mRNA is cell-to-cell mobile.","HEAT SHOCK TRANSCRIPTION FACTOR B2A (HSFB2A)","HEAT SHOCK TRANSCRIPTION FACTOR B2A (HSFB2A);ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR B2A (AT-HSFB2A)"]
["AT1G32330","grey","Member of Heat Stress Transcription Factor (Hsf) family. Negatively regulated by HSP90.2.","HEAT SHOCK TRANSCRIPTION FACTOR A1D (HSFA1D)","HEAT SHOCK TRANSCRIPTION FACTOR A1D (ATHSFA1D);HEAT SHOCK TRANSCRIPTION FACTOR A1D (HSFA1D)"]
["AT2G26150","grey","member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.","HEAT SHOCK TRANSCRIPTION FACTOR A2 (HSFA2)","HEAT SHOCK TRANSCRIPTION FACTOR A2 (ATHSFA2);HEAT SHOCK TRANSCRIPTION FACTOR A2 (HSFA2)"]
["AT5G18040","grey","target of trans acting-siR480/255 protein;(source:Araport11)","HEAT-INDUCED TAS1 TARGET 2 (HTT2)","HEAT-INDUCED TAS1 TARGET 2 (HTT2)"]
["AT2G30480","grey","Required for efficient meiotic crossover implementation and is conserved from plants to humans.","HEI10 INTERACTING PROTEIN 1 (HEIP1)","HEI10 INTERACTING PROTEIN 1 (HEIP1)"]
["AT2G26670","grey","Encodes a plastid heme oxygenase necessary for phytochrome chromophore biosynthesis and for coupling the expression of some nuclear genes to the functional state of the chloroplast.","REVERSAL OF THE DET PHENOTYPE 4 (TED4)","HEME OXYGENASE 1 (HY1);ARABIDOPSIS THALIANA HEME OXYGENASE 1 (ATHO1);HEME OXYGENASE 1 (HO1);REVERSAL OF THE DET PHENOTYPE 4 (TED4);GENOMES UNCOUPLED 2 (GUN2);HEME OXYGENASE 6 (HY6)"]
["AT2G30470","grey","HSI2 is a member of the ABI3 family of B3 domain proteins and functions as an active repressor of the Spo minimal promoter through the EAR motif. It contains a plant-specific B3 DNA-binding domain. It is expressed at similar levels in all organs. Treatment with 6% sucrose showed a slight increase in transcript levels after 24 h. No changes were observed after treatment with 50?M ABA. It is localized in the nucleus via a nuclear localization sequence located in the fourth conserved region of the C-terminal B3 domain. HSI2 is also an epigenetic repressor as it also contains functional plant homeodomain-like (PHD-L) and zinc-finger Cys- and Trp-containing (CW) domains associated with epigenetic regulation. The PHD-L domain of HSI2 is connected to promoting trimethylation of Lys-27 on histone 3 (H3K27me3), while the CW domain can bind directly to H3K4me3. Through these domains, HSI2 represses the seed maturation program during seed germination by repressing transcription of the core LAFL (LEC1, ABI3, FUS3, and LEC2) seed developmental transcriptional regulators. In developing A. thaliana embryos, HSI2 suppresses expression of a large number of genes, many identified as targets of FUS3. However, the absence of HSI2 had no effect on transcript levels of the LAFL regulators and the levels of measured metabolites and phytohormones (ABA, auxin, and JA derivatives) in developing Arabidopsis embryos. HSI2 likely fine-tunes seed maturation by repressing genes involved in early embryogenesis that are not required later for seed maturation and desiccation.","HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE GENE 2 (HSI2)","HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE GENE 2 (HSI2);VP1/ABI3-LIKE 1 (VAL1);VIVIPAROUS1/ABI3-LIKE1 (VAL1)"]
["AT2G29380","grey","highly ABA-induced PP2C protein 3;(source:Araport11)","HIGHLY ABA-INDUCED PP2C GENE 3 (HAI3)","HIGHLY ABA-INDUCED PP2C GENE 3 (HAI3)"]
["AT2G17820","grey","Encodes a member of the histidine kinase family.","HISTIDINE KINASE 1 (HK1)","HISTIDINE KINASE 1 (ATHK1);HISTIDINE KINASE 1 (HK1); (AHK1)"]
["AT1G03430","grey","Encodes AHP5, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).","HISTIDINE-CONTAINING PHOSPHOTRANSFER FACTOR 5 (AHP5)","HISTIDINE-CONTAINING PHOSPHOTRANSFER FACTOR 5 (AHP5)"]
["AT5G10390","grey","Histone 3.1","(HTR13)","HISTONE 3.1 (H3.1); (HTR9); (HTR13)"]
["AT1G51060","grey","Encodes HTA10, a histone H2A protein. The mRNA is cell-to-cell mobile.","HISTONE H2A 10 (HTA10)","HISTONE H2A 10 (HTA10)"]
["AT4G16780","grey","Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin. The mRNA is cell-to-cell mobile.","HOMEOBOX PROTEIN 2 (HB-2)","HOMEOBOX PROTEIN 2 (ATHB-2); (HAT4);ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2 (ATHB2);HOMEOBOX PROTEIN 2 (HB-2)"]
["AT1G27050","grey","Encodes a protein with a RNA recognition motif. Previously annotated as ATHB54, a homeodomain leucine zipper (HD-Zip) family protein. In the TAIR10 genome release (2010), this locus was split into two loci: AT1G27045 (containing homeodomain and leucine zipper domains) and AT1G27050 (containing a RNA recognition motif). AT1G27045 is now named ATHB54. Note that Affymetrix ATH1 Probe Set linked to symbol ATHB54 is in fact directed against the product of the AT1G27050 locus (the mRNA coding for the RNA-recognition-motif protein).",null,"HOMEOBOX PROTEIN 54 (HB54);HOMEOBOX PROTEIN 54 (ATHB54)"]
["AT1G02145","grey","Plays a role in the regulation of the endoplasmic reticulum-associated degradation of misfolded glycoproteins, and plant growth and stress response.","HOMOLOG OF ASPARAGINE-LINKED GLYCOSYLATION 12 (ALG12)","HOMOLOG OF ASPARAGINE-LINKED GLYCOSYLATION 12 (ALG12);EMS-MUTAGENIZED BRI1(BRASSINOSTEROID INSENSITIVE 1) SUPPRESSOR 4 (EBS4); (SBI2)"]
["AT1G53490","grey","Encodes HEI10, a RING finger-containing protein. HEI10 belongs to a group of proteins well conserved among species known as ZMM. Required for class I crossover formation. The mRNA is cell-to-cell mobile.","HOMOLOG OF HUMAN HEI10 ( ENHANCER OF CELL INVASION NO.10) (HEI10)","HOMOLOG OF HUMAN HEI10 ( ENHANCER OF CELL INVASION NO.10) (HEI10)"]
["AT1G04050","grey","Encodes SUVR1, one of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. Localized to the nucleolus, maybe involved in regulation of rRNA expression.","HOMOLOG OF SU(VAR)3-9 1 (SUVR1)","HOMOLOG OF SU(VAR)3-9 1 (SUVR1);SET DOMAIN PROTEIN 13 (SDG13)"]
["AT4G39740","grey","Encodes HCC2, one of the two Arabidopsis genes (HCC1 and HCC2) resulting from a duplication with homology to the SCO proteins involved in copper insertion during cytochrome c oxidase (COX) assembly in other organisms. HCC2, which lacks the cysteines and histidine putatively involved in copper binding, functions in copper sensing and redox homeostasis.","HOMOLOGUE OF COPPER CHAPERONE SCO1 2 (HCC2)","HOMOLOGUE OF COPPER CHAPERONE SCO1 2 (HCC2)"]
["AT1G17550","grey","Protein Phosphatase 2C","HOMOLOGY TO ABI2 (HAB2)","HOMOLOGY TO ABI2 (HAB2); (ATHAB2); (NHL29)"]
["AT1G72970","grey","Originally identified as a mutation that causes floral organs to fuse together. About 10-20% of mutants also have defects in ovules. Mutants have reduced fertility most likely as because of fusions that pistil emergence. The protein has similarity to the mandelonitrile lyase family of FAD containing oxidoreductases and is predicted to be secreted (SignalP).It is expressed in all tissue layers of roots, inflorescences, stems, leaves, and flowers and is also expressed in siliques. Expression is highest in inflorescence and flower tissue.Transmission of mutant alleles to the progeny shows non mendelian segregation- a percentage of mutant alleles revert back to a previous parental (e.g. grandparental) wild type allele. It has been suggested that an RNA template driven or other extra-DNA genomic mechanism may be responsible for the non-mendelian inheritance of HTH. Reversion events in alleles at other loci have also been observed to occur in plants with an hth mutant background indicating a genome wide effect.","HOTHEAD (HTH)","HOTHEAD (HTH);EMBRYO SAC DEVELOPMENT ARREST 17 (EDA17)"]
["AT3G17609","grey","Encodes a homolog of HY5 (HYH). Involved in phyB signaling pathway.","HY5-HOMOLOG (HYH)","HY5-HOMOLOG (HYH)"]
["AT3G47350","grey","Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.","HYDROXYSTEROID DEHYDROGENASE 2 (HSD2)","HYDROXYSTEROID DEHYDROGENASE 2 (AtHSD2);HYDROXYSTEROID DEHYDROGENASE 2 (HSD2)"]
["AT1G72770","grey","mutant has ABA hypersensitive inhibition of seed germination; Protein Phosphatase 2C; regulates the activation of the Snf1-related kinase OST1 by abscisic acid. The mRNA is cell-to-cell mobile.","HYPERSENSITIVE TO ABA1 (HAB1)","HYPERSENSITIVE TO ABA1 (HAB1); (ATHAB1)"]
["AT1G58250","grey","SABRE, putative gene of unknown function, homologous to maize apt1 gene. Required for normal cell expansion in the root cortex. The sabre mutation results in abnormal cell expansion. Encodes a rare message; very low level of expression was detected in roots and shoots.","SABRE (SAB)","HYPERSENSITIVE TO PI STARVATION 4 (HPS4);SABRE (SAB)"]
["AT1G71750","grey","Encodes a protein with hypoxanthine-guanine-phosphoribosyltransferase activity. Unlike some related enzymes, it does not appear to act on xanthine in vitro. The enzyme catalyzes reactions occurring in both directions, but appears to prefer acting on guanine, followed by hypoxanthine, in vitro. The enzyme is likely to function in purine salvage pathways and appears to be important for seed germination.","HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE (HGPT)","HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE (HGPT)"]
["AT4G37560","grey","Indole-3-acetamide (IAM) hydrolase gene required for the auxin effects of IAM.","IAMHYDROLASE12 (IAMH2)","IAMHYDROLASE12 (IAMH2)"]
["AT4G05530","grey","Encodes a peroxisomal member of the short-chain dehydrogenase/reductase (SDR) family of enzymes. Loss of IBR1 function causes increased resistance to indole-3-butyric acid without affecting plant responses to IAA, NAA, and 2,4-D. This enzyme may be responsible for catalyzing a dehydrogenation step in the beta-oxidation-like conversion of IBA to IAA. The mRNA is cell-to-cell mobile.","INDOLE-3-BUTYRIC ACID RESPONSE 1 (IBR1)","INCREASED BOTRYTIS RESISTANCE 1 (IBR1);INDOLE-3-BUTYRIC ACID RESPONSE 1 (IBR1);SHORT-CHAIN DEHYDROGENASE/REDUCTASE A (SDRA)"]
["AT2G01200","grey","Belongs to auxin inducible gene family.","INDOLE-3-ACETIC ACID INDUCIBLE 32 (IAA32)","INDOLE-3-ACETIC ACID INDUCIBLE 32 (IAA32);MATERNAL EFFECT EMBRYO ARREST 10 (MEE10)"]
["AT2G04400","grey","Acts during tryptophan biosynthesis controlled by ERF109.","INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE (IGPS)","INDOLE-3-GLYCEROL PHOSPHATE SYNTHASE (IGPS)"]
["AT3G24010","grey","ING1 encodes a member of the Inhibitor of Growth family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.ING1 functions as a subunit of the PAGA complex in Arabidopsis, and its specific binding affinity for H3K4me2/3 peptides provides a molecular basis for the enrichment of H3K4me3 at PAGA-bound genes.","INHIBITOR OF GROWTH 1 (ING1)","INHIBITOR OF GROWTH 1 (ING1);ARABIDOPSIS THALIANA INHIBITOR OF GROWTH 1 (ATING1)"]
["AT1G54390","grey","ING2 encodes a member of the Inhibitor of Growth family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA.","INHIBITOR OF GROWTH 2 (ING2)","INHIBITOR OF GROWTH 2 (ING2)"]
["AT1G34360","grey","translation initiation factor 3 (IF-3) family protein;(source:Araport11)","(ATINFC-1)","INITIATION FACTOR 3-1 (ATIF3-1); (ATINFC-1)"]
["AT2G46470","grey","inner membrane protein OXA1-like protein;(source:Araport11)","INNER MEMBRANE PROTEIN OXA1-LIKE (OXA1L)","INNER MEMBRANE PROTEIN OXA1-LIKE (OXA1L); (OXA1B)"]
["AT1G28760","grey","Encodes an orthlog of the Xenopus inner nuclear membrane (INM) protein Nemp1/TMEM194A.It is an inner nuclear membrane protein that binds with nucleoskeleton proteins.","INNER NUCLEAR MEMBRANE PROTEIN A (NEMP_A)","INNER NUCLEAR MEMBRANE PROTEIN A (NEMP_A); (PNET2_A)"]
["AT4G08170","grey","Inositol 1,3,4-trisphosphate 5/6-kinase family protein;(source:Araport11)","INOSITOL 1,3,4-TRISPHOSPHATE 5/6-KINASE 3 (ITPK3)","INOSITOL 1,3,4-TRISPHOSPHATE 5/6-KINASE 3 (ITPK3); (ATTPK3)"]
["AT5G07370","grey","Encodes inositol polyphosphate kinase, which phosphorylates inositol 1,4,5-triphosphate and inositol 1,3,4,5-tetrakisphosphate to generate inositol 1,3,4,5,6-pentakisphosphate. Acts redundantly with ATIPK2beta during pollen development, pollen tube guidance and embryogenesis. The mRNA is cell-to-cell mobile.","INOSITOL POLYPHOSPHATE KINASE 2 ALPHA (IPK2a)","INOSITOL POLYPHOSPHATE KINASE 2 ALPHA (ATIPK2A);INOSITOL MULTI-PHOSPHATE KINASE (IMPK);INOSITOL POLYPHOSPHATE KINASE 2 ALPHA (IPK2a)"]
["AT3G07170","grey","Sterile alpha motif (SAM) domain-containing protein;(source:Araport11)","INVOLVED IN RRNA PROCESSING 1 (IRP1)","INVOLVED IN RRNA PROCESSING 1 (IRP1)"]
["AT1G29250","grey","ALBA protein which forms a complex with ALBA2 that binds genic R-loops and safeguards genome stability.","INVOLVED IN RRNA PROCESSING 5 (IRP5)","INVOLVED IN RRNA PROCESSING 5 (IRP5); (ALBA1)"]
["AT5G13460","grey","Member of IQ67 (CaM binding) domain containing family.","IQ-DOMAIN 11 (IQD11)","IQ-DOMAIN 11 (IQD11)"]
["AT2G43680","grey","Member of IQ67 (CaM binding) domain containing family.","IQ-DOMAIN 14 (IQD14)","IQ-DOMAIN 14 (IQD14)"]
["AT4G23060","grey","Member of IQ67 (CaM binding) domain containing family.","IQ-DOMAIN 22 (IQD22)","IQ-DOMAIN 22 (IQD22)"]
["AT5G62070","grey","Member of IQ67 (CaM binding) domain containing family.","IQ-DOMAIN 23 (IQD23)","IQ-DOMAIN 23 (IQD23)"]
["AT2G38440","grey","Encodes a subunit of the WAVE complex. The WAVE complex is required for activation of ARP2/3 complex which functions in actin microfilament nucleation and branching. Mutations cause defects in both the actin and microtubule cytoskeletons that result in aberrant epidermal cell expansion. itb1 mutants showed irregularities in trichome branch positioning and expansion. The SHD domain of this protein binds to BRK1 and overexpression of the SHD domain results in a dominant negative phenotype. The mRNA is cell-to-cell mobile.","SCAR HOMOLOG 2 (SCAR2)","IRREGULAR TRICHOME BRANCH1 (ITB1);SCAR HOMOLOG 2 (SCAR2); (DIS3); (WAVE4);SCAR HOMOLOG 2 (ATSCAR2)"]
["AT1G54340","grey","NADP-specific isocitrate dehydrogenase (ICDH) The mRNA is cell-to-cell mobile.","ISOCITRATE DEHYDROGENASE (ICDH)","ISOCITRATE DEHYDROGENASE (ICDH)"]
["AT4G35260","grey","Encodes a regulatory subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase.","ISOCITRATE DEHYDROGENASE 1 (IDH1)","ISOCITRATE DEHYDROGENASE 1 (IDH1);ISOCITRATE DEHYDROGENASE I (IDH-I)"]
["AT1G63970","grey","Encodes a protein with 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity. The protein's activity was confirmed by heterologous expression of phenotypic complementation of the E. coli ispF mutant. Plants defective in this gene display an albino lethal phenotype.Homolog of E. coli IspF","ISOPRENOID F (ISPF)","ISOPRENOID F (ISPF);2C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE (MECPS)"]
["AT3G02410","grey","alpha/beta-Hydrolases superfamily protein;(source:Araport11)","ISOPRENYLCYSTEINE METHYLESTERASE-LIKE 2 (ICME-LIKE2)","ISOPRENYLCYSTEINE METHYLESTERASE-LIKE 2 (ICME-LIKE2)"]
["AT2G43100","grey","Small subunit, which together with IPMI SSU2, IPMI SSU3 and IPMI LSU1, is a member of heterodimeric isopropylmalate isomerase (IPMI). Together with IPMI SSU3 participates in the Met chain elongation pathway.","ISOPROPYLMALATE ISOMERASE 2 (IPMI2)","ISOPROPYLMALATE ISOMERASE 2 (IPMI2); (ATLEUD1);ISOPROPYLMALATE ISOMERASE SMALL SUB-UNIT 2 (IPMI SSU2)"]
["AT3G45300","grey","Encodes isovaleryl-coenzyme a dehydrogenase. Mutants have increases in 12 seed free amino acids, accumulation of seed homomethionine and 3-isovaleroyloxypropyl-glucosinolate, with a concomitant decrease in seed 3-benzoyloxypropyl-glucosinolate. The mRNA is cell-to-cell mobile.","ISOVALERYL-COA-DEHYDROGENASE (IVD)","ISOVALERYL-COA-DEHYDROGENASE (IVD);ISOVALERYL-COA-DEHYDROGENASE (IVDH); (ATIVD)"]
["AT5G03150","grey","JKD is a nuclear-localized putative transcription factor of the BIRDS/IDD C2H2 zinc finger family. JKD and its homologue BIB, restrict SHR movement to a single layer, the endodermis, and delimit tissue boundaries in the root meristem through a process that involves nuclear retention through protein complex formation. JKD mutation leads to periclinal divisions in the cortex, increased cell numbers in the circumference of the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. This effect is enhanced in jkd bib double mutants where tissue boundaries cannot be maintained due to excessive SHR movement. JKD and BIB restrict CYCIND6 expression to cortex and endodermis stem cells to prevent formative divisions in the ground tissue. JKD physically interacts with cell fate determinants SCR and SHR in a cell type specific manner. Native FRET-FLIM analysis showed higher JKD-SCR complex in the endodermis and predominant JKD-SHR in the QC and cortex/endodermis stem cells. In addition, JKD, SCR and SHR form a ternary complex whose conformation is cell type dependent, conformational changes of this complex differentially regulate SCR and WOX5 expression to specify endodermal cell fate and QC function respectively. Its mRNA is cell-to-cell mobile.","JACKDAW (JKD)","JACKDAW (JKD)"]
["AT2G38240","grey","One of 4 paralogs encoding a 2-oxoglutarate/Fe(II)-dependent oxygenases that hydroxylates JA to 12-OH-JA.","JASMONATE-INDUCED OXYGENASE4 (JOX4)","JASMONATE-INDUCED OXYGENASE4 (JOX4);JASMONIC ACID OXIDASE 4 (JAO4)"]
["AT2G34600","grey","Key regulator in alternative splicing in the jasmonate signaling pathway, alone and in collaboration with other regulators.","JASMONATE-ZIM-DOMAIN PROTEIN 7 (JAZ7)","JASMONATE-ZIM-DOMAIN PROTEIN 7 (JAZ7); (TIFY5B)"]
["AT2G29640","grey","JOSEPHIN-like protein;(source:Araport11)","JOSEPHIN-LIKE PROTEIN (JOSL)","JOSEPHIN-LIKE PROTEIN (JOSL)"]
["AT1G63490","grey","Histone demethylase belonging to the KDM5/JARID1 family which plays crucial roles in response to dehydration stress and abscisic acid (ABA). Directly binds the chromatin of OPEN STOMATA 1 (OST1) and demethylated H3K4me3 for the regulation of OST1 mRNA abundance, thereby modulating the dehydration stress response.","JUMONJI DOMAIN-CONTAINING PROTEIN 17 (JMJ17)","JUMONJI DOMAIN-CONTAINING PROTEIN 17 (JMJ17)"]
["AT1G32240","grey","Encodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis.","KANADI 2 (KAN2)","KANADI 2 (KAN2)"]
["AT5G07480","grey","KAR-UP oxidoreductase 1;(source:Araport11)","KAR-UP OXIDOREDUCTASE 1 (KUOX1)","KAR-UP OXIDOREDUCTASE 1 (KUOX1)"]
["AT3G52890","grey","KCBP-interacting protein kinase interacts specifically with the tail region of KCBP","KCBP-INTERACTING PROTEIN KINASE (KIPK)","KCBP-INTERACTING PROTEIN KINASE (KIPK); (KIPK1)"]
["AT5G11060","grey","A member of Class II KN1-like homeodomain transcription factors (together with KNAT3 and KNAT5), with greatest homology to the maize knox1 homeobox protein. Expression regulated by light. Detected in all tissues examined, but most prominent in leaves and young siliques. Transient expression of GFP translational fusion protein suggests bipartite localization in nucleus and cytoplasm. KNAT4 promoter activity showed cell-type specific pattern along longitudinal root axis; GUS expression pattern started at the elongation zone, predominantly in the phloem and pericycle cells, extending to endodermis toward the base of the root.","KNOTTED1-LIKE HOMEOBOX GENE 4 (KNAT4)","KNOTTED1-LIKE HOMEOBOX GENE 4 (KNAT4)"]
["AT1G23380","grey","homeodomain transcription factor KNAT6, belonging to class I of KN transcription factor family (which also includes KNAT1 and KNAT2). Expression is increased in as and bop1 leaf mutants.","KNOTTED1-LIKE HOMEOBOX GENE 6 (KNAT6)","KNOTTED1-LIKE HOMEOBOX GENE 6 (KNAT6); (KNAT6L); (KNAT6S)"]
["AT5G47390","grey","Encodes a circadian-regulated transcription factor which specifically controls cell expansion during leaf development by controlling ROS homeostasis. The mRNA is cell-to-cell mobile.","MYB HYPOCOTYL ELONGATION-RELATED (MYBH)","KUODA1 (CHINESE FOR ENLARGE OR EXPAND) (KUA1);MYB HYPOCOTYL ELONGATION-RELATED (MYBH)"]
["AT1G52690","grey","Intrinsically disordered protein that stabilizes lactate dehydrogenase (LDH) during drying and freezing.","LATE EMBRYOGENESIS ABUNDANT 7 (LEA7)","LATE EMBRYOGENESIS ABUNDANT 7 (LEA7)"]
["AT2G42430","grey","LOB-domain protein gene LBD16. This gene contains one auxin-responsive element (AuxRE). Regluates lateral root formation.","LATERAL ORGAN BOUNDARIES-DOMAIN 16 (LBD16)","LATERAL ORGAN BOUNDARIES-DOMAIN 16 (LBD16);ASYMMETRIC LEAVES2-LIKE 18 (ASL18)"]
["AT2G39230","grey","Encodes a pentatricopeptide protein (LOJ) that is specifically expressed in lateral organ junctions.","LATERAL ORGAN JUNCTION (LOJ)","LATERAL ORGAN JUNCTION (LOJ)"]
["AT1G18390","grey","Serine/Threonine kinase family catalytic domain protein;(source:Araport11)","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR- LIKE PROTEIN KINASE-LIKE 1.2 (LRK10L1.2)","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR- LIKE PROTEIN KINASE-LIKE 1.2 (LRK10L1.2)"]
["AT4G20380","grey","LSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway. contains zinc-finger motifs. LSD1 negatively regulates a basal defense pathway that can act upstream or independently of both NIM1/NPR1 function and SA accumulation following avirulent or virulent pathogen challenge","LESION SIMULATING DISEASE 1 (LSD1)","LESION SIMULATING DISEASE 1 (LSD1);CHILLING SENSITIVE 4 (CHS4); (CHS4)"]
["AT5G51410","grey","LUC7 N terminus domain-containing protein;(source:Araport11)","LETHAL UNLESS CBC 7 RL (LUC7RL)","LETHAL UNLESS CBC 7 RL (LUC7RL)"]
["AT1G65540","grey","LETM1-like protein;(source:Araport11)","LEUCINE ZIPPER-EF-HAND-CONTAINING TRANSMEMBRANE PROTEIN 2 (LETM2)","LEUCINE ZIPPER-EF-HAND-CONTAINING TRANSMEMBRANE PROTEIN 2 (LETM2); (ATLETM2)"]
["AT3G47930","grey","L-Galactono-1,4-lactone dehydrogenase, catalyzes the final step of ascorbate biosynthesis.","L-GALACTONO-1,4-LACTONE DEHYDROGENASE (GLDH)","L-GALACTONO-1,4-LACTONE DEHYDROGENASE (GLDH);L-GALACTONO-1,4-LACTONE DEHYDROGENASE (ATGLDH)"]
["AT3G26640","grey","Encodes LIGHT-REGULATED WD1 (LWD1), a clock proteins regulating circadian period length and photoperiodic flowering.","LIGHT-REGULATED WD 2 (LWD2)","LIGHT-REGULATED WD 2 (LWD2)"]
["AT3G50920","grey","Encodes a phosphatidic acid phosphatase that can be detected in chloroplast membrane fractions. This gene (LPPepsilon1) and LPPepsilon2, appear to be less important for diacylglycerol formation in the plastids than LPPgamma.","LIPID PHOSPHATE PHOSPHATASE EPSILON 1 (LPPEPSILON1)","LIPID PHOSPHATE PHOSPHATASE EPSILON 1 (LPPEPSILON1)"]
["AT3G52770","grey","ZPR3 is a small-leucine zipper containing protein that is involved in the establishment of leaf polarity.","LITTLE ZIPPER 3 (ZPR3)","LITTLE ZIPPER 3 (ZPR3)"]
["AT1G31320","grey","Putative transcriptional regulator protein. Promotes cytokinin induced secondary growth in roots.","LOB DOMAIN-CONTAINING PROTEIN 4 (LBD4)","LOB DOMAIN-CONTAINING PROTEIN 4 (LBD4)"]
["AT5G55370","grey","MBOAT (membrane bound O-acyl transferase) family protein;(source:Araport11)","LONG-CHAIN-ALCOHOL O-FATTY-ACYLTRANSFERASE 2 (AT2)","LONG-CHAIN-ALCOHOL O-FATTY-ACYLTRANSFERASE 2 (AT2)"]
["AT1G56070","grey","encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive.","LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1)","LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1);LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (AT1G56075.1)"]
["AT5G47010","grey","Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes. The mRNA is cell-to-cell mobile.","LOW-LEVEL BETA-AMYLASE 1 (LBA1)","LOW-LEVEL BETA-AMYLASE 1 (LBA1); (ATUPF1);UP-FRAMESHIFT1 (UPF1)"]
["AT5G60310","grey","Concanavalin A-like lectin protein kinase family protein;(source:Araport11)","L-TYPE LECTIN RECEPTOR KINASE I.10 (LECRK-I.10)","L-TYPE LECTIN RECEPTOR KINASE I.10 (LECRK-I.10)"]
["AT3G10230","grey","Encodes a protein with lycopene &#946;-cyclase activity. This enzyme uses the linear, symmetrical lycopene as substrate. However, unlike the &#949;-cyclase which adds only one ring, the &#946;-cyclase introduces a ring at both ends of lycopene to form the bicyclic &#946;-carotene.","LYCOPENE CYCLASE (LYC)","LYCOPENE CYCLASE (LYC); (AtLCY);SUPPRESSOR OF ZEAXANTHIN-LESS 1 (SZL1)"]
["AT2G17120","grey","Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant. It contains a C-terminal GPI anchor signal and is an ortholog of OsCEBiP.","LYSM-CONTAINING RECEPTOR PROTEIN 1 (LYP1)","LYSM DOMAIN GPI-ANCHORED PROTEIN 2 PRECURSOR (LYM2);CEBIP-LIKE 1 (CL-1);LYSM-CONTAINING RECEPTOR PROTEIN 1 (LYP1)"]
["AT1G22730","grey","MA3 domain-containing protein;(source:Araport11)","MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 2 (MRF2)","MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 2 (MRF2)"]
["AT2G47600","grey","Encodes a magnesium/proton exchanger, member of putative Na+/Ca2+ antiporter gene family","MAGNESIUM/PROTON EXCHANGER (MHX)","MAGNESIUM/PROTON EXCHANGER (ATMHX);MAGNESIUM/PROTON EXCHANGER 1 (MHX1); (ATMHX1);MAGNESIUM/PROTON EXCHANGER (MHX)"]
["AT2G11000","grey","Encodes a non-functional Arabidopsis homolog of the yeast protein MAK10, a component of the N-terminal acetyltransferase complex C. Mutant plants have normal photosynthesis as well as growth rates and pigmentation comparable to wild type.","MAK10 HOMOLOGUE (MAK10)","MAK10 HOMOLOGUE (ATMAK10); (MAK10);MAK10 HOMOLOGUE (MAK10)"]
["AT4G01220","grey","Encodes MGP4 (MALE GAMETOPHYTE DEFECTIVE 4), a rhamnogalacturonan II xylosyltransferase important for growth of pollen tubes and roots.","MALE GAMETOPHYTE DEFECTIVE 4 (MGP4)","MALE GAMETOPHYTE DEFECTIVE 4 (MGP4)"]
["AT5G44710","grey","37S ribosomal protein S27;(source:Araport11)","MALE STERILE 33 (MS33)","MALE STERILE 33 (MS33)"]
["AT3G05990","grey","Leucine-rich repeat (LRR) family protein;(source:Araport11)","(LLR3)","MALECTIN-LIKE DOMAIN (MLD)- AND LEUCINE-RICH REPEAT (LRR)-CONTAINING PROTEIN 3 (MLLR3); (LLR3)"]
["AT1G73670","grey","member of MAP Kinase The mRNA is cell-to-cell mobile.","MAP KINASE 15 (MPK15)","MAP KINASE 15 (ATMPK15);MAP KINASE 15 (MPK15)"]
["AT2G43790","grey","Encodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.MPK6 appears to be associated with the microsomal compartment and may be involved in mediating secretory processes. The mRNA is cell-to-cell mobile.","MAP KINASE 6 (MPK6)","MAP KINASE 6 (ATMPK6);MAP KINASE 6 (MPK6);MAP KINASE 6 (MAPK6);MAP KINASE 6 (ATMAPK6)"]
["AT4G29810","grey","Encodes a MAP kinase kinase 2 that regulates MPK6 and MPK4 in response to cold and salt stresses. Co-expression with MEKK1 in protoplasts activated MKK2 activity, suggesting that MEKK1 may be a regulator of MKK2.","MAP KINASE KINASE 2 (MKK2)","MAP KINASE KINASE 2 (ATMKK2);MAP KINASE KINASE 2 (MKK2);MAP KINASE KINASE 1 (MK1)"]
["AT3G02570","grey","Encodes a protein with phosphomannose isomerase activity.","MATERNAL EFFECT EMBRYO ARREST 31 (MEE31)","MATERNAL EFFECT EMBRYO ARREST 31 (MEE31);PHOSPHOMANNOSE ISOMERASE 1 (PMI1)"]
["AT3G11270","grey","Mov34/MPN/PAD-1 family protein;(source:Araport11)","MATERNAL EFFECT EMBRYO ARREST 34 (MEE34)","MATERNAL EFFECT EMBRYO ARREST 34 (MEE34);INVOLVED IN RRNA PROCESSING 4 (IRP4)"]
["AT4G00060","grey","Nucleotidyltransferase family protein;(source:Araport11)","MATERNAL EFFECT EMBRYO ARREST 44 (MEE44)","MATERNAL EFFECT EMBRYO ARREST 44 (MEE44); (NTP9)"]
["AT1G25310","grey","basic helix-loop-helix (bHLH) DNA-binding family protein;(source:Araport11)","MATERNAL EFFECT EMBRYO ARREST 8 (MEE8)","MATERNAL EFFECT EMBRYO ARREST 8 (MEE8)"]
["AT5G19480","grey","mediator of RNA polymerase II transcription subunit;(source:Araport11)","MEDIATOR 19B (MED19B)","MEDIATOR 19B (MED19B)"]
["AT1G23230","grey","Mediator tail subunit, involved in transcriptional regulation. Mediator Complex Subunit, interacts with MED2, MED5, MED16 in the Regulation of Phenylpropanoid Biosynthesis.","MEDIATOR 23 (MED23)","MEDIATOR 23 (MED23)"]
["AT2G03070","grey","Encodes a subunit of the Mediator complex. Regulates plant defense and flowering.","MEDIATOR SUBUNIT 8 (MED8)","MEDIATOR SUBUNIT 8 (MED8)"]
["AT2G42890","grey","A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML2 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. AML2 is expressed during early embryo development (heart and torpedo stage) and predominantly in vegetative organs; no significant accumulation was detected in floral apices.","MEI2-LIKE 2 (ML2)","MEI2-LIKE 2 (AML2);MEI2-LIKE 2 (ML2)"]
["AT4G18120","grey","A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML3 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML3 is the transcript with highest frequency of alternative splicing. Expression was detected during early embryo development (heart and torpedo stage); no accumulation was detected in vegetative and floral apices, as revealed by in situ hybridization.","MEI2-LIKE 3 (ML3)","MEI2-LIKE 3 (AML3);MEI2-LIKE 3 (ML3)"]
["AT5G52870","grey","Encodes a member of the MAKR (MEMBRANE-ASSOCIATED KINASE REGULATOR) gene family. MAKRs have putative kinase interacting motifs and membrane localization signals. Known members include: AT5G26230 (MAKR1), AT1G64080 (MAKR2), AT2G37380 (MAKR3), AT2G39370 (MAKR4), AT5G52870 (MAKR5) and AT5G52900 (MAKR6).","MEMBRANE-ASSOCIATED KINASE REGULATOR 5 (MAKR5)","MEMBRANE-ASSOCIATED KINASE REGULATOR 5 (MAKR5)"]
["AT5G54110","grey","Encodes a highly polar protein with more than 60% hydrophilic amino acid residues that is associated with the plasma membrane. It has limited secondary structure similarity to VAP-33 from Aplysia, which may be involved in membrane trafficking. The mRNA is cell-to-cell mobile.","MEMBRANE-ASSOCIATED MANNITOL-INDUCED (MAMI)","MEMBRANE-ASSOCIATED MANNITOL-INDUCED (MAMI);MEMBRANE-ASSOCIATED MANNITOL-INDUCED (ATMAMI)"]
["AT3G12100","grey","Cation efflux family protein;(source:Araport11)","METAL TRANSPORT PROTEIN 5 (MTP5)","METAL TRANSPORT PROTEIN 5 (MTP5); (ATMTP5)"]
["AT1G53670","grey","1-Cys methionine sulfoxide reductase.","METHIONINE SULFOXIDE REDUCTASE B 1 (MSRB1)","METHIONINE SULFOXIDE REDUCTASE B 1 (MSRB1); (ATMSRB1)"]
["AT4G04800","grey","methionine sulfoxide reductase B3;(source:Araport11)","METHIONINE SULFOXIDE REDUCTASE B3 (MSRB3)","METHIONINE SULFOXIDE REDUCTASE B3 (ATMSRB3);METHIONINE SULFOXIDE REDUCTASE B3 (MSRB3)"]
["AT4G04810","grey","methionine sulfoxide reductase B4;(source:Araport11)","METHIONINE SULFOXIDE REDUCTASE B4 (MSRB4)","METHIONINE SULFOXIDE REDUCTASE B4 (ATMSRB4);METHIONINE SULFOXIDE REDUCTASE B4 (MSRB4)"]
["AT4G04830","grey","Methionine sulfoxide reductase which functions as a salt-stress protector; over-expression causes salt stress resistance.","METHIONINE SULFOXIDE REDUCTASE B5 (MSRB5)","METHIONINE SULFOXIDE REDUCTASE B5 (ATMSRB5);METHIONINE SULFOXIDE REDUCTASE B5 (MSRB5)"]
["AT5G35330","grey","Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.","METHYL-CPG-BINDING DOMAIN PROTEIN 02 (MBD02)","METHYL-CPG-BINDING DOMAIN PROTEIN 2 (MBD2); (ATMBD2);METHYL-CPG-BINDING DOMAIN PROTEIN 02 (MBD02)"]
["AT5G16470","grey","zinc finger (C2H2 type) family protein;(source:Araport11)","METHYLENE BLUE SENSITIVITY 2 (MBS2)","METHYLENE BLUE SENSITIVITY 2 (MBS2)"]
["AT2G35630","grey","Member of the MAP215 family of microtubule-associated proteins required to establish interphase arrays of cortical microtubules.Mutants have defects in cytokinesis during pollen development. Vegetative phenotypes observed in temperature sensitive mutants include left-handed organ twisting, isotropic cell expansion and impairment of root hair polarity. The mRNA is cell-to-cell mobile.","MICROTUBULE ORGANIZATION 1 (MOR1)","MICROTUBULE ORGANIZATION 1 (MOR1); (GEM1)"]
["AT2G01750","grey","Encodes a microtubule associated protein (MAP70-3). Expressed in all tissues.","MICROTUBULE-ASSOCIATED PROTEINS 70-3 (MAP70-3)","MICROTUBULE-ASSOCIATED PROTEINS 70-3 (MAP70-3)"]
["AT5G54890","grey","RNA-binding CRS1 / YhbY (CRM) domain-containing protein;(source:Araport11)","MITOCHONDRIAL CAF-LIKE SPLICING FACTOR 2 (MCSF2)","MITOCHONDRIAL CAF-LIKE SPLICING FACTOR 2 (MCSF2)"]
["AT1G06140","grey","Encodes MEF3 (mitochondrial editing factor 3), a PPR (pentatricopeptide repeat) protein of the E domain subclass. Functions in mitochondrial RNA editing.","MITOCHONDRIAL EDITING FACTOR 3 (MEF3)","MITOCHONDRIAL EDITING FACTOR 3 (MEF3)"]
["AT4G14050","grey","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)","MITOCHONDRIAL EDITING FACTOR 35 (MEF35)","MITOCHONDRIAL EDITING FACTOR 35 (MEF35)"]
["AT1G62260","grey","Encodes MITOCHONDRIAL EDITING FACTOR 9 (MEF9), an E subclass PPR protein required for RNA editing.","MITOCHONDRIAL EDITING FACTOR 9 (MEF9)","MITOCHONDRIAL EDITING FACTOR 9 (MEF9)"]
["AT4G37910","grey","Mitochondrial chaperone that interacts with COX2 and functions in cytochrome oxidase assembly.Mutants have pleiotropic defects in growth and development including defects un auxin gradients that may be secondary effects related to mitochondrial metabolism.","MITOCHONDRIAL HEAT SHOCK PROTEIN 70-1 (mtHsc70-1)","MITOCHONDRIAL HEAT SHOCK PROTEIN 70-1 (mtHsc70-1); (HSP70-9)"]
["AT1G66345","grey","Pentatricopeptide Repeat Protein involved in splicing of nad4 intron which affects biogenesis of the respiratory complex I.","MITOCHONDRIAL INTRON SPLICING FACTOR 26 (MISF26)","MITOCHONDRIAL INTRON SPLICING FACTOR 26 (MISF26)"]
["AT3G16010","grey","Pentatricopeptide Repeat Protein involved in splicing of nad4, nad 5 and nad2 introns which affects biogenesis of the respiratory complex I.","MITOCHONDRIAL INTRON SPLICING FACTOR 68 (MISF68)","MITOCHONDRIAL INTRON SPLICING FACTOR 68 (MISF68)"]
["AT5G64710","grey","Putative endonuclease or glycosyl hydrolase;(source:Araport11)","MITOCHONDRIAL NUCLEASE 1 (MNU1)","MITOCHONDRIAL NUCLEASE 1 (MNU1)"]
["AT2G17270","grey","Encodes a mitochondrial phosphate transporter. Modulates plant responses to salt stress.","PHOSPHATE TRANSPORTER 3;3 (PHT3;3)","MITOCHONDRIAL PHOSPHATE TRANSPORTER 1 (MPT1);PHOSPHATE TRANSPORTER 3;3 (PHT3;3)"]
["AT4G30700","grey","Encodes a pentatricopeptide repeat protein involved in mitochondrial RNA editing.","MITOCHONDRIAL RNA EDITING FACTOR 29 (MEF29)","MITOCHONDRIAL RNA EDITING FACTOR 29 (MEF29)"]
["AT1G06710","grey","Pentatricopeptide repeat protein that stabilizes nad4 mRNA in mitochondria.","MITOCHONDRIAL STABILITY FACTOR 1 (MTSF1)","MITOCHONDRIAL STABILITY FACTOR 1 (MTSF1);MITOCHONDRIAL STABILITY FACTOR 2 (MTSF2)"]
["AT5G64950","grey","mTERF family protein which functions in the regulation of mtDNA transcription.","MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR 22 (MTERF22)","MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR 22 (MTERF22)"]
["AT5G54180","grey","Encodes a member of the Mitochondrial Transcription Termination Factor Family and is involved in the transcription termination of the chloroplast gene psbJ1. pTAC15 specifically binds to the 3'-terminal region of psbJ.","PLASTID TRANSCRIPTIONALLY ACTIVE 15 (PTAC15)","MITOCHONDRIAL TRANSCRIPTION TERMINATOR FACTOR 8 (MTERF8);PLASTID TRANSCRIPTIONALLY ACTIVE 15 (PTAC15)"]
["AT5G64320","grey","MTL1 is a mitochondria localized PRR protein involved in mitochondrial protein translation and group II intron splicing.","MITOCHONDRIAL TRANSLATION FACTOR 1 (MTL1)","MITOCHONDRIAL TRANSLATION FACTOR 1 (MTL1)"]
["AT1G10210","grey","Encodes ATMPK1. Kinase is activated by wounding.","MITOGEN-ACTIVATED PROTEIN KINASE 1 (MPK1)","MITOGEN-ACTIVATED PROTEIN KINASE 1 (ATMPK1);MITOGEN-ACTIVATED PROTEIN KINASE 1 (MPK1)"]
["AT5G40440","grey","Encodes a mitogen-activated protein kinase kinase. Activates MPK8 and is a target of MPKKK20. Mutant root growth is sensitive oryzalin and suggestive of a role in signaling during microtubule organization.","MITOGEN-ACTIVATED PROTEIN KINASE KINASE 3 (MKK3)","MITOGEN-ACTIVATED PROTEIN KINASE KINASE 3 (MKK3);MITOGEN-ACTIVATED PROTEIN KINASE KINASE 3 (ATMKK3)"]
["AT2G30040","grey","Member of MEKK subfamily. Induced by jasmonic acid and wounding in involved in insectivory response signaling. Iinteracts with At5g40440, and activates At1g59580.","MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14 (MAPKKK14)","MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 14 (MAPKKK14)"]
["AT5G66850","grey","Encodes a member of the MEKK subfamily that functions redundantly with MAPKKK3 to activate MPK3/6 downstream of multiple pattern recognition receptors and confer resistance to both bacterial and fungal pathogens.","MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 (MAPKKK5)","MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 (MAPKKK5)"]
["AT3G07980","grey","MAP3K epsilon protein kinase 2 is functionally redundant with MAP3Ke1. Required for pollen development but not essential.","MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 6 (MAPKKK6)","MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 6 (MAPKKK6);MAP3K EPSILON PROTEIN KINASE 2 (MAP3KE2)"]
["AT2G36060","grey","MMZ3/UEV1C encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UEV1C can form diubiquitin and triubiquitin chains in combination with UBC13A/UBC35 in vitro. It can also functionally complement an mms2 mutation in budding yeast, both by increasing mms2 mutant viability in the presence of the DNA damaging agent MMS, and by reducing the rate of spontaneous DNA mutation. It can also rescue an mms2 ubc13 double mutant in yeast in combination with UBC13A. MMZ3/UEV1C transcripts are found at moderate levels in most plant organs, but cannot be detected in the pollen or 2 days after germination. Transcript levels do not appear to be stress-inducible.","MMS ZWEI HOMOLOGUE 3 (MMZ3)","MMS ZWEI HOMOLOGUE 3 (MMZ3);UBIQUITIN E2 VARIANT 1C (UEV1C)"]
["AT5G02770","grey","Encodes a conserved eukaryotic protein with homology to the human RNA binding protein CIP29 that localizes to the nucleus. Mutants accumulate more poly(A) mRNAs in the nucleus, likely resulting from reduced mRNA export activity.","MODIFIER OF SNC1, 11 (MOS11)","MODIFIER OF SNC1, 11 (MOS11)"]
["AT2G26840","grey","Encodes a Holliday junction resolvase that binds and cleaves the core of Holliday junctions symmetrically. It appears to mediate chloroplast nucleoid segregation during chloroplast division.","MONOKARYOTIC CHLOROPLAST 1 (MOC1)","MONOKARYOTIC CHLOROPLAST 1 (MOC1)"]
["AT2G42620","grey","The mutations at MAX2 cause increased hypocotyl and petiole elongation in light-grown seedlings. Positional cloning identifies MAX2 as a member of the F-box leucine-rich repeat family of proteins. MAX2 is identical to ORE9, a proposed regulator of leaf senescence. Involved in positive regulation of light responses. The mRNA is cell-to-cell mobile.","MORE AXILLARY BRANCHES 2 (MAX2)","MORE AXILLARY BRANCHES 2 (MAX2);ORESARA 9 (ORE9);PLEIOTROPIC PHOTOSIGNALING (PPS); (ATMAX2)"]
["AT1G36370","grey","Encodes a nuclear localised protein MSA1 (MORE SULPHUR ACCUMULATION1). Epigenetically regulates sulphur homeostasis. Has sequence similarity to SHM (serine hydroxymethyltransferase) but lacks SHM activity in vitro.","MORE SULPHUR ACCUMULATION1 (MSA1)","MORE SULPHUR ACCUMULATION1 (MSA1);SERINE HYDROXYMETHYLTRANSFERASE 7 (SHM7)"]
["AT2G29580","grey","Encodes MAC5B, homologous to MAC5A. MAC5A is a component of the MOS4-associated complex (MAC) that contributes to snc1- mediated autoimmunity. Homologues include AT1G07360 (MAC5A), AT2G29580 (MAC5B) and AT5G07060 (MAC5C).","MOS4-ASSOCIATED COMPLEX SUBUNIT 5B (MAC5B)","MOS4-ASSOCIATED COMPLEX SUBUNIT 5B (MAC5B); (ATC3H25)"]
["AT1G58200","grey","A member of MscS-like gene family, structurally very similar to MSL2, comprising of an N-terminal chloroplast transit peptide, five trans-membrane helices and a C-terminal cytoplasmic domain. Mutant plants showed abnormalities in the size and shape of plastids. MSL3-GFP was localized to discrete foci on the plastid envelope and co-localize with the plastid division protein AtMinE. MSL3 was capable of increasing the osmotic-shock survival of a mutant bacterial strain lacking MS-ion-channel activity.","MSCS-LIKE 3 (MSL3)","MSCS-LIKE 3 (MSL3)"]
["AT1G06740","grey","Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8).","MUSTANG 3 (MUG3)","MUSTANG 3 (MUG3)"]
["AT5G16505","grey","Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8).","MUSTANG 4 (MUG4)","MUSTANG 4 (MUG4)"]
["AT3G28910","grey","Encodes a MYB family transcriptional regulator.It is a a positive regulator of the pathogen-induced hypersensitive response and of brassinosteroid and abscisic acid signaling and a negative regulator of photomorphogenesis. Accumulation of MYB30 is light regulated and activity is modulated by SUMOlaytion. MYB30 can for complexes with different bHLH components to regulate expression of different pathways.","MYB DOMAIN PROTEIN 30 (MYB30)","MYB DOMAIN PROTEIN 30 (MYB30); (ATMYB30)"]
["AT2G16720","grey","Encodes a member of MYB3R- and R2R3- type MYB- encoding gene family that acts as a repressor of flavonol biosynthesis. AtMYB7 gene expression is induced by salt treatment.","MYB DOMAIN PROTEIN 7 (MYB7)","MYB DOMAIN PROTEIN 7 (MYB7);ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 7 (ATMYB7); (ATY49)"]
["AT3G19960","grey","Class VIII myosin involved in sucrose and auxin stimulated cell division.Localized to plasma membrane and plasmodesmata.","MYOSIN 1 (ATM1)","MYOSIN 1 (ATM1)"]
["AT1G53210","grey","Encodes a Na+/Ca 2+ exchanger-like protein that participates in the maintenance of Ca 2+ homeostasis. The mRNA is cell-to-cell mobile.","NA+/CA2+ EXCHANGER (NCL)","NA+/CA2+ EXCHANGER (NCL); (ATNCL)"]
["AT5G27150","grey","Encodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development. The mRNA is cell-to-cell mobile.","NA+/H+ EXCHANGER 1 (NHX1)","NA+/H+ EXCHANGER 1 (NHX1); (ATNHX1); (AT-NHX1); (ATNHX)"]
["AT3G10500","grey","Encodes a transcriptional activator that is associated with the plasma membrane in a dormant form and is proteolytically cleaved to create a form that can enter the nucleus. It is thought to promote ROS production by binding directly to the promoters of genes encoding ROS biosynthetic enzymes during drought-induced leaf senescence. The mRNA is cell-to-cell mobile.","NAC DOMAIN CONTAINING PROTEIN 53 (NAC053)","NAC DOMAIN CONTAINING PROTEIN 53 (anac053);NAC DOMAIN CONTAINING PROTEIN 53 (NAC053);NAC WITH TRANSMEMBRANE MOTIF 1-LIKE 4 (NTL4);ANTHER INDEHISCENCE FACTOR (AIF)"]
["AT2G35020","grey","Encodes a protein that functions as an N-acetylglucosamine-1-phosphate uridylyltransferase that catalyzes the formation of UDP-N-acetylglucosamine (UDP-GlcNAc). This is an essential precursor for glycolipid and glycoprotein synthesis and is also used for regulatory protein modification in signaling pathways. The enzyme can also catalyze the reverse reaction using both UDP-GlcNAc and the less common UDP-N-acetylgalactosamine as substrates. This enzyme can also act on glucose-1-phosphate to produce UDP-glucose. The mRNA is cell-to-cell mobile.","N-ACETYLGLUCOSAMINE-1-PHOSPHATE URIDYLYLTRANSFERASE 2 (GlcNAc1pUT2)","N-ACETYLGLUCOSAMINE-1-PHOSPHATE URIDYLYLTRANSFERASE 2 (GlcNAc1pUT2);N-ACETYLGLUCOSAMINE-1-PHOSPHATE URIDYLYLTRANSFERASE 2 (GLCNA.UT2)"]
["ATMG00513","grey","Mitochondrial NADH dehydrogenase subunit 5. The gene is trans-spliced from three different pre-cursors. Previously there were three AGI identifiers for the individual trans-spliced sections.","NADH DEHYDROGENASE SUBUNIT 5 (NAD5)","NADH DEHYDROGENASE 5.1 (NAD5.1);NADH DEHYDROGENASE SUBUNIT 5 (NAD5);NADH DEHYDROGENASE 5.2 (NAD5.2);NADH DEHYDROGENASE SUBUNIT 5.3 (NAD5.3);NADH DEHYDROGENASE SUBUNIT 5C (NAD5C);NADH DEHYDROGENASE 5A (NAD5A);NADH DEHYDROGENASE 5B (NAD5B)"]
["ATMG00070","grey","NADH dehydrogenase subunit 9","NADH DEHYDROGENASE SUBUNIT 9 (NAD9)","NADH DEHYDROGENASE SUBUNIT 9 (NAD9)"]
["AT4G15545","grey","NAI1 interacting protein, involved in ER body formation.","NAI2-INTERACTING PROTEIN 1 (NAIP1)","NAI2-INTERACTING PROTEIN 1 (NAIP1)"]
["AT5G13850","grey","nascent polypeptide-associated complex subunit alpha-like protein 3;(source:Araport11)","NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3 (NACA3)","NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3 (NACA3)"]
["AT1G03150","grey","Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11)","NATB CATALYTIC SUBUNIT (NAA20)","NATB CATALYTIC SUBUNIT (NAA20)"]
["AT3G17850","grey","Protein kinase which together with IRE3 plays an important role in controlling root skewing and maintaining the microtubule network.","NCOMPLETE ROOT HAIR ELONGATION 1 (IREH1)","NCOMPLETE ROOT HAIR ELONGATION 1 (IREH1)"]
["AT1G32340","grey","Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression is not detected under normal conditions and in response to cucumber mosaic virus or spermine.","NDR1/HIN1-LIKE 8 (NHL8)","NDR1/HIN1-LIKE 8 (NHL8)"]
["AT1G66130","grey","NAD(P)-binding Rossmann-fold protein involved in negative regulation of plant basal defense and systemic acquired resistance.","NEGATIVE IMMUNE AND GROWTH REGULATOR 1 (NIGR1)","NEGATIVE IMMUNE AND GROWTH REGULATOR 1 (NIGR1)"]
["AT4G02710","grey","Kinase interacting (KIP1-like) family protein;(source:Araport11)","NETWORKED 1C (NET1C)","NETWORKED 1C (NET1C)"]
["AT1G58210","grey","Encodes a member of the NET superfamily of proteins that potentially couples different membranes to the actin cytoskeleton in plant cells. It colocalizes with filamentous actin and is localized to the plasma membrane.","EMBRYO DEFECTIVE 1674 (EMB1674)","NETWORKED 2A (NET2A);EMBRYO DEFECTIVE 1674 (EMB1674);&#946; KINETOCHORE NULL2 (&#946;KNL2)"]
["AT3G61970","grey","AP2/B3-like transcriptional factor family protein;(source:Araport11)","NGATHA2 (NGA2)","NGATHA2 (NGA2)"]
["AT3G11580","grey","SOD7 encodes nuclear localized B3 DNA binding domain and a transcriptional repression motif. Belongs to the RAV gene family. Functions in regulation of seed size and binds to and represses KLU. Transcription repressor involved in regulation of inflorescence architecture. Required for axillary meristem formation and acts by repression of CUC2/CUC3.Based on expression patterns, it is not required for stem cell specification during embryo shoot apical meristem initiation.","NGATHA-LIKE PROTEIN2 (NGAL2)","NGATHA-LIKE PROTEIN2 (NGAL2);SUPPRESSOR OF DA1-1 (SOD7)"]
["AT3G12200","grey","Encodes AtNek7, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.","NIMA-RELATED KINASE 7 (Nek7)","NIMA-RELATED KINASE 7 (Nek7)"]
["AT3G14440","grey","Encodes 9-<i>cis</i>-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. Regulated in response to drought and salinity. Expressed in roots, flowers and seeds. Localized to the chloroplast stroma and thylakoid membrane.","NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3 (NCED3)","NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 3 (NCED3); (ATNCED3);SALT TOLERANT 1 (STO1);SUGAR INSENSITIVE 7 (SIS7)"]
["AT1G30100","grey","Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene increases during the first 6h of imbibition.","NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5 (NCED5)","NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5 (ATNCED5);NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 5 (NCED5)"]
["AT1G20640","grey","(NODULE INCEPTION)-LIKE PROTEIN, together with NLP5 controls a rhizobia-induced decrease in cell elongation rates, while additional cell divisions occurred independently of NLP4.","NIN-LIKE PROTEIN 4 (NLP4)","NIN-LIKE PROTEIN 4 (NLP4)"]
["AT1G77760","grey","Encodes the cytosolic minor isoform of nitrate reductase (NR). Involved in the first step of nitrate assimilation, it contributes about 15% of the nitrate reductase activity in shoots. Similar to molybdopterin oxidoreductases at the N-terminus, and to FAD/NAD-binding cytochrome reductases at the C-terminus. Cofactors: FAD, heme iron (cytochrome B-557), and molybdenum-pterin.","NITRATE REDUCTASE 1 (NIA1)","NITRATE REDUCTASE 1 (NIA1);NITRATE REDUCTASE 1 (NR1); (GNR1)"]
["AT3G60320","grey","bZIP domain class transcription factor (DUF630 and DUF632);(source:Araport11)","NITRATE REGULATORY GENE 2 (NRG2)","NITRATE REGULATORY GENE 2 (NRG2)"]
["AT3G44300","grey","Encodes an enzyme that catalyzes the hydrolysis of indole-3-acetonitrile (IAN) to indole-3-acetic acid (IAA) (nitrile aminohydrolase, EC 3.5.5.1) and IAN to indole-3-acetamide (IAM) at lower levels. Mutants have reduced sensitivity to IAN and are sensitive to IAA. This enzyme likely participates in other non-auxin-related metabolic pathways. The mRNA is cell-to-cell mobile.","NITRILASE 2 (NIT2)","NITRILASE 2 (NIT2);NITRILASE 2 (AtNIT2)"]
["AT5G65720","grey","Encodes a cysteine desulfurase whose activity is dependent on AtSufE activation. It requires pyridoxal phosphate (PLP) for proper folding. Its catalytic efficiency is increase three-fold in the presence of AtFH (frataxin).","NITROGEN FIXATION S (NIFS)-LIKE 1 (NFS1)","NITROGEN FIXATION S HOMOLOG 1 (ATNIFS1);ARABIDOPSIS THALIANA NITROGEN FIXATION S (NIFS)-LIKE 1 (ATNFS1);NITROGEN FIXATION S (NIFS)-LIKE 1 (NFS1);NITROGEN FIXATION S HOMOLOG 1 (NIFS1)"]
["AT3G16350","grey","MYB-like transcription factor involved in nitrate signaling through regulation of CHL1.","NITROGEN RESPONSE DEFICIENCY 1 (NID1)","NITROGEN RESPONSE DEFICIENCY 1 (NID1)"]
["AT3G51610","grey","Encodes a membrane protein NO PRIMEXINE AND PLASMA MEMBRANE UNDULATION (NPU). Involved in primexine deposition and plasma membrane undulation during early pollen wall development.","NO PRIMEXINE AND PLASMA MEMBRANE UNDULATION (NPU)","NO PRIMEXINE AND PLASMA MEMBRANE UNDULATION (NPU)"]
["AT4G03090","grey","AtNDX negatively regulates ABI4 expression during ABA signaling.","NODULIN HOMEOBOX (NDX)","NODULIN HOMEOBOX (NDX); (ATNDX)"]
["AT2G03440","grey","Induced at the transcriptional level by Pseudomonas syringae pv. tomato infection.","NODULIN-RELATED PROTEIN 1 (NRP1)","NODULIN-RELATED PROTEIN 1 (NRP1); (ATNRP1)"]
["AT1G64280","grey","This gene is a key regulator of the salicylic acid (SA)-mediated systemic acquired resistance (SAR) pathway. It is similar to the transcription factor inhibitor I kappa B, and contains ankyrin repeats. It confers resistance to the pathogens Pseudomonas syringae and Peronospora parasitica in a dosage-dependent fashion. Although transgenic Arabidopsis plants overexpressing NPR1 acquire enhanced sensitivity to SA and (benzothiadiazole) BTH, they display no obvious detrimental morphological changes and do not have elevated pathogenesis-related gene expression until activated by inducers or pathogens.","NONEXPRESSER OF PR GENES 1 (NPR1)","NONEXPRESSER OF PR GENES 1 (NPR1);SALICYLIC ACID INSENSITIVE 1 (SAI1);NON-INDUCIBLE IMMUNITY 1 (NIM1);ARABIDOPSIS NONEXPRESSER OF PR GENES 1 (ATNPR1)"]
["AT1G71330","grey","member of NAP subfamily","NON-INTRINSIC ABC PROTEIN 5 (NAP5)","NON-INTRINSIC ABC PROTEIN 5 (ATNAP5);NON-INTRINSIC ABC PROTEIN 5 (NAP5)"]
["AT5G11630","grey","The mutant is insensitive to oxylipin 9-HOT treatment. Involved in plant defense.","NONRESPONDING TO OXYLIPINS 2 (NOXY2)","NONRESPONDING TO OXYLIPINS 2 (NOXY2)"]
["AT1G06670","grey","nuclear DEIH-box helicase (NIH) encoding a putative RNA and/or DNA helicase homologous to a group of nucleic acid helicases from the DEAD/H family with nuclear DEIH-box helicase (NIH) distinct N- and C-terminal regions that differ from animal DEIH proteins The mRNA is cell-to-cell mobile.","NUCLEAR DEIH-BOXHELICASE (NIH)","NUCLEAR DEIH-BOXHELICASE (NIH)"]
["AT2G27470","grey","nuclear factor Y, subunit B11;(source:Araport11)","NUCLEAR FACTOR Y, SUBUNIT B11 (NF-YB11)","NUCLEAR FACTOR Y, SUBUNIT B11 (NF-YB11)"]
["AT1G61000","grey","Encodes a subunit of the Arabidopsis NDC80 complex that modulates spindle microtubule organization and chromosome segregation during mitosis.","NUCLEAR FILAMENT-CONTAINING PROTEIN 2 (NUF2)","NUCLEAR FILAMENT-CONTAINING PROTEIN 2 (NUF2)"]
["AT1G30010","grey","Analysis of the RNA profiles of wild-type and mutant plants establishes a role for nMAT1 in the trans-splicing of nad1 intron 1 and in the cis-splicing of nad2 intron 1 and nad4 intron 2.","NUCLEAR MATURASE 1 (NMAT1)","NUCLEAR MATURASE 1 (NMAT1)"]
["AT1G06790","grey","Encodes a subunit of RNA polymerase III involved in maintaining global RNA homeostasis, not just that of genes transcribed by RNA pol III.","NUCLEAR RNA POLYMERASE C, SUBUNIT 7 (NRPC7)","NUCLEAR RNA POLYMERASE C, SUBUNIT 7 (NRPC7)"]
["AT3G23780","grey","This gene encodes the second largest, catalytic subunit of the nuclear DNA-dependent RNA polymerase IV (aka RNA polymerase D). The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin.","NUCLEAR RNA POLYMERASE D2A (NRPD2A)","NUCLEAR RNA POLYMERASE D2A (NRPD2A); (DRD2); (NRPD2);DEFECTIVE IN MERISTEM SILENCING 2 (DMS2); (NRPE2);OVEREXPRESSOR OF CATIONIC PEROXIDASE 1 (OCP1)"]
["AT4G31240","grey","protein kinase C-like zinc finger protein;(source:Araport11)","NUCLEOREDOXIN 2 (NRX2)","NUCLEOREDOXIN 2 (NRX2); (ATNRX2)"]
["AT3G13782","grey","Plants mutated in three ubiquitously expressed NAP1 genes (NAP1;1~NAP1;3) and organ-specifically expressed NAP1;4 gene show hypersensitivity to genotoxic stresses including UV and DSB-inducing agent Bleomycin. The NAP1 genes act synergistically with NRP genes in promoting somatic homologous recombination.","NUCLEOSOME ASSEMBLY PROTEIN1;4 (NAP1;4)","NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A 4 (NFA4);NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A 04 (NFA04);NUCLEOSOME ASSEMBLY PROTEIN1;4 (NAP1;4)"]
["AT3G10620","grey","Encodes a ppGpp pyrophosphohydrolase.","NUDIX HYDROLASE HOMOLOG 26 (NUDX26)","NUDIX HYDROLASE HOMOLOG 26 (ATNUDX26);NUDIX HYDROLASE HOMOLOG 26 (NUDX26)"]
["AT1G18300","grey","nudix hydrolase homolog 4;(source:Araport11)","NUDIX HYDROLASE HOMOLOG 4 (NUDT4)","NUDIX HYDROLASE HOMOLOG 4 (atnudt4);NUDIX HYDROLASE HOMOLOG 4 (NUDT4)"]
["AT2G04430","grey","nudix hydrolase homolog 5;(source:Araport11)","NUDIX HYDROLASE HOMOLOG 5 (NUDT5)","NUDIX HYDROLASE HOMOLOG 5 (NUDT5);NUDIX HYDROLASE HOMOLOG 5 (atnudt5)"]
["AT4G14880","grey","Encodes a cytosolic isoform of cytosolic O-acetylserine(thiol)lyase, a key enzyme in cysteine biosynthesis and for the fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. Gene expression is predominant in the root cortex and the xylem parenchyma. Gene expression is induced in leave, stems and roots by high salt and heavy metal stresses, mediated by ABA. Lines carrying semi-dominant mutations exhibit early senescence. Required for pollen tube growth and/or fertilization.","O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1 (OASA1)","O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1 (OASA1);ONSET OF LEAF DEATH 3 (OLD3); (CYTACS1)"]
["AT3G22460","grey","Encodes a member of a family of genes with O-acetylserine(thiol)lyase activity.","O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A2 (OASA2)","O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A2 (OASA2)"]
["AT3G46990","grey","DUF740 family protein, putative (DUF740);(source:Araport11)","OCTOPUS LIKE 3 (OPL3)","OCTOPUS LIKE 3 (OPL3)"]
["AT5G67320","grey","Encodes a WD-40 protein involved in histone deacetylation in response to abiotic stress.Identified in a screen for mutations with altered expression of stress induced genes. Functions as a repressor of cold tolerance induced genes. Loss of function mutants are hypersensitive to freezing.Part of a PWR-HOS15-HD2C complex to regulate expression of COR genes involved in cold tolerance via histone modification.","HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 15 (HOS15)","OLIGOCELLULA1 (OLI1);HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 15 (HOS15)"]
["AT1G54080","grey","oligouridylate-binding protein 1A;(source:Araport11)","OLIGOURIDYLATE-BINDING PROTEIN 1A (UBP1A)","OLIGOURIDYLATE-BINDING PROTEIN 1A (UBP1A)"]
["AT5G43822","grey","Encodes an essential protein of unknown function.OPNR is expressed in rapidly dividing cells and may function in cell cycle progression. It is expressed in mitochondria and the nuclear envelope. Loss of function results in embryo lethality and reduced transmission through the female.","OPENER (OPNR)","OPENER (OPNR)"]
["AT3G52050","grey","5-3 exonuclease family protein;(source:Araport11)","ORGANELLAR EXONUCLEASE 1 (OEX1)","ORGANELLAR EXONUCLEASE 1 (OEX1)"]
["AT1G47720","grey","Encodes an organellar single-strand DNA binding protein, located in mitochondria, controls the stoichiometry of alternative mitochondrial DNA forms generated by homologous recombination.","ORGANELLAR SINGLE-STRANDED (OSB1)","ORGANELLAR SINGLE-STRANDED (OSB1)"]
["AT4G25270","grey","Encodes OTP70, a pentatricopeptide repeat protein of the E subgroup involved in splicing of the plastid transcript rpoC1.","ORGANELLE TRANSCRIPT PROCESSING 70 (OTP70)","ORGANELLE TRANSCRIPT PROCESSING 70 (OTP70)"]
["AT2G02980","grey","Encodes a chloroplast RNA editing factor.","ORGANELLE TRANSCRIPT PROCESSING 85 (OTP85)","ORGANELLE TRANSCRIPT PROCESSING 85 (OTP85)"]
["AT1G74600","grey","OTP87 appears to act as a trans-factor involved in the recognition of the two editing sites in mitochondrial genes nad7-C24 and atp1-C1178.","ORGANELLE TRANSCRIPT PROCESSING 87 (OTP87)","ORGANELLE TRANSCRIPT PROCESSING 87 (OTP87)"]
["AT5G42000","grey","Interacts with serine palmitoyltransferase (SPT) to negatively regulate sphingolipid biosynthesis.","(ATORM2)","OROSOMUCOID-LIKE 2 (ORM2); (ATORM2)"]
["AT1G01880","grey","Encodes one of two GEN1 homologs in Arabidopsis. It is a member of the class IV Rad2/XPG family of nucleases that processes Holliday junctions in a manner analogous to the HJ resolvases of phages, archaea, and bacteria.","ORTHOLOG OF HSGEN1 (GEN1)","ORTHOLOG OF HSGEN1 (GEN1); (ATGEN1)"]
["AT5G02100","grey","Encodes a protein that binds to beta-sitosterol and localizes to the ER. The WFDE motif in ORP3a appears to be important for a direct interaction with PVA12 [Plant VAMP-Associated protein 12]. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent.","UNFERTILIZED EMBRYO SAC 18 (UNE18)","OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3A (ORP3A);UNFERTILIZED EMBRYO SAC 18 (UNE18)"]
["AT2G27350","grey","Encodes an otubain-like histone deubiquitinase involved in chromatin modification and regulation of plant gene expression.","OTUBAIN-LIKE DEUBIQUITINASE 1 (OTLD1)","OTUBAIN-LIKE DEUBIQUITINASE 1 (OTLD1)"]
["AT3G62940","grey","Induces cross-talks among epigenomes that altogether impact the regulation of approximately 7060 genes of which 186 genes associated with root development.","OVARIAN TUMOR DOMAIN (OTU)-CONTAINING DUB (DEUBIQUITILATING ENZYME) 5 (OTU5)","OVARIAN TUMOR DOMAIN (OTU)-CONTAINING DUB (DEUBIQUITILATING ENZYME) 5 (OTU5)"]
["AT5G39590","grey","TLD-domain containing nucleolar protein;(source:Araport11)","OXIDATION RESISTANCE 5 (OXR5)","OXIDATION RESISTANCE 5 (OXR5)"]
["AT2G32240","grey","PAMP induced protein involved in defense response. Interaction with UBAC2 proteins in the ER, is necessary for PAMP mediated accumulation of the callose synthase PMR4.","PAMP-INDUCED COILED COIL (PICC)","PAMP-INDUCED COILED COIL (PICC)"]
["AT4G32180","grey","Encodes a protein with pantothenate kinase activity.","PANTOTHENATE KINASE 2 (PANK2)","PANTOTHENATE KINASE 2 (PANK2);PANTOTHENATE KINASE 2 (ATPANK2)"]
["AT4G21990","grey","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.","APS REDUCTASE 3 (APR3)","PAPS REDUCTASE HOMOLOG 26 (PRH26); (ATAPR3);APS REDUCTASE 3 (APR3); (PRH-26)"]
["AT1G11400","grey","The PYM gene encodes a protein capable of interacting with MAGO, and Y14, whose orthologs form part of the exon junction complex in animal cells. In vitro binding assays indicate that PYM can bind to MAGO and Y14 either individually, or when they are together. But, MAGO-Y14-PYM ternary complexes are difficult to detect in vivo in Arabidopsis based on pull-down experiments. However there is some evidence for a weak association in Arabidopsis flowers. PYM appears primarily cytoplasmic, but it also seems to into the nucleus at times. Its nuclear localization signal has not been rigorously defined, but there is evidence for a nuclear export signal between amino acids 171-205 in the C-terminus.","PARTNER OF Y14-MAGO (PYM)","PARTNER OF Y14-MAGO (PYM)"]
["AT4G14990","grey","Topoisomerase II-associated protein PAT1;(source:Araport11)","PAT1 HOMOLOG 2 (PAT1H2)","PAT1 HOMOLOG 2 (PAT1H2); (ATPAT1H2); (PATH2)"]
["AT4G29940","grey","Homeodomain protein (PRHA). Expression of the gene differs in various vegetative and floral plant tissues and is positively influenced by the phytohormone auxin. It is often associated with regions of developing vascular tissue. The prha promoter is highly responsive to the synthetic auxin, naphthalene acetic acid, in transient assays using tobacco protoplasts. The PRHA protein has the capacity to bind to TAATTG core sequence elements but requires additional adjacent bases for high-affinity binding.","PATHOGENESIS RELATED HOMEODOMAIN PROTEIN A (PRHA)","PATHOGENESIS RELATED HOMEODOMAIN PROTEIN A (PRHA)"]
["AT3G04720","grey","Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection. The mRNA is cell-to-cell mobile.","PATHOGENESIS-RELATED 4 (PR4)","PATHOGENESIS-RELATED 4 (PR4);HEVEIN-LIKE (HEL); (PR-4); (ATPR4)"]
["AT2G14610","grey","PR1 gene expression is induced in response to a variety of pathogens. It is a useful molecular marker for the SAR response. Though the Genbank record for the cDNA associated to this gene is called 'PR-1-like', the sequence actually corresponds to PR1. Expression of this gene is salicylic-acid responsive.","PATHOGENESIS-RELATED GENE 1 (PR1)","PATHOGENESIS-RELATED GENE 1 (PR1);PATHOGENESIS-RELATED GENE 1 (PR 1);PATHOGENESIS-RELATED GENE 1 (ATPR1); (ATCAPE9)"]
["AT2G17220","grey","Encodes a putative serine/threonine-specific protein kinase kin3. Protein is N-myristoylated.","KINASE 3 (KIN3)","PBS1-LIKE 32 (PBL32);KINASE 3 (KIN3)"]
["AT3G01300","grey","Receptor-like cytoplasmic kinase involved in CLE and BAM signaling to maintain root meristem homeostasis.","PBS1-LIKE 35 (PBL35)","PBS1-LIKE 35 (PBL35)"]
["AT3G28690","grey","Receptor-like cytoplasmic kinase involved in CLE and BAM signaling to maintain root meristem homeostasis.","PBS1-LIKE 36 (PBL36)","PBS1-LIKE 36 (PBL36)"]
["AT2G28940","grey","Protein kinase superfamily protein;(source:Araport11)","PBS1-LIKE 37 (PBL37)","PBS1-LIKE 37 (PBL37)"]
["AT2G39110","grey","Protein kinase superfamily protein;(source:Araport11)","PBS1-LIKE 38 (PBL38)","PBS1-LIKE 38 (PBL38)"]
["AT5G03320","grey","Protein kinase superfamily protein;(source:Araport11)","PATTERN-TRIGGERED IMMUNITY COMPROMISED RECEPTOR-LIKE CYTOPLASMIC KINASE 2 (PCRK2)","PBS1-LIKE 40 (PBL40);PATTERN-TRIGGERED IMMUNITY COMPROMISED RECEPTOR-LIKE CYTOPLASMIC KINASE 2 (PCRK2)"]
["AT5G02800","grey","Encodes CDL1, a homolog of CDG1. CDL1 positively regulates brassinosteroid signaling and plant growth.","CDG1-LIKE 1 (CDL1)","PBS1-LIKE 7 (PBL7);CDG1-LIKE 1 (CDL1)"]
["AT5G06370","grey","PSE1 is a single copy gene that is induced in response to lead and confers increased tolerance to lead when overexpressed. It is localized to the cytoplasm. The protein has an NC domain. PSE1 appears to regulate tolerance via a GSH dependent phytochelatin synthesis pathway.","PB-SENSITIVE1 (PSE1)","PB-SENSITIVE1 (PSE1)"]
["AT1G52260","grey","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin).","PDI-LIKE 1-5 (PDIL1-5)","PDI-LIKE 1-5 (ATPDIL1-5);ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 3 (ATPDI3);PROTEIN DISULFIDE ISOMERASE 3 (PDI3);PDI-LIKE 1-5 (PDIL1-5)"]
["AT1G35620","grey","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants. The mRNA is cell-to-cell mobile.","PDI-LIKE 5-2 (PDIL5-2)","PDI-LIKE 5-2 (ATPDIL5-2);ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 8 (ATPDI8);PROTEIN DISULFIDE ISOMERASE 8 (PDI8);PDI-LIKE 5-2 (PDIL5-2)"]
["AT1G02810","grey","probable pseudogene","PECTIN METHYL ESTERASE INHIBITOR-PECTIN METHYLESTERASE7 (PMEI-PME7)","PECTIN METHYL ESTERASE INHIBITOR-PECTIN METHYLESTERASE7 (PMEI-PME7)"]
["AT1G53830","grey","encodes a pectin methylesterase involved in callus formation.","PECTIN METHYLESTERASE 2 (PME2)","PECTIN METHYLESTERASE 2 (PME2);PECTIN METHYLESTERASE 2 (ATPME2)"]
["AT4G27650","grey","Encodes Arabidopsis homolog of Drosophila pelota protein. Functions in RNA the non-stop decay (NSD) and no-go decay (NGD) quality control systems that act during translation.","PELOTA (PEL1)","PELOTA (PEL1)"]
["AT3G16890","grey","Encodes a mitochondrial pentatricopeptide repeat (PPR) domain protein, PPR40, which provides a signalling link between mitochondrial electron transport and regulation of stress and hormonal responses. Mutations in PPR40 result in enhanced sensitivity to salt, ABA and oxidative stress, as well as reduced electron transport through Complex III (cytochrome c reductase).","PENTATRICOPEPTIDE (PPR) DOMAIN PROTEIN 40 (PPR40)","PENTATRICOPEPTIDE (PPR) DOMAIN PROTEIN 40 (PPR40)"]
["AT1G52620","grey","Mitochondrial pentatricopeptide repeat protein required for stabilizing nad1 transcripts.","PENTATRICOPEPTIDE REPEAT PROTEIN 19 (PPR19)","PENTATRICOPEPTIDE REPEAT PROTEIN 19 (PPR19);MITOCHONDRIAL STABILITY FACTOR 2 (MTSF2)"]
["AT5G07470","grey","ubiquitous enzyme that repairs oxidatively damaged proteins","PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3 (PMSR3)","PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3 (PMSR3);ARABIDOPSIS THALIANA METHIONINE SULFOXIDE REDUCTASE 3 (ATMSRA3)"]
["AT3G61070","grey","member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.","PEROXIN 11E (PEX11E)","PEROXIN 11E (PEX11E)"]
["AT3G58840","grey","Encodes PEROXISOMAL AND MITOCHONDRIAL DIVISION FACTOR1. Involved in the morphogenesis and proliferation of peroxisomes and mitochondria.","PEROXISOMAL AND MITOCHONDRIAL DIVISION FACTOR 1 (PMD1)","PEROXISOMAL AND MITOCHONDRIAL DIVISION FACTOR 1 (PMD1)"]
["AT3G55320","grey","P-glycoprotein 20;(source:Araport11)","ATP-BINDING CASSETTE B20 (ABCB20)","P-GLYCOPROTEIN 20 (PGP20);ATP-BINDING CASSETTE B20 (ABCB20)"]
["AT2G39480","grey","P-glycoprotein 6;(source:Araport11)","ATP-BINDING CASSETTE B6 (ABCB6)","P-GLYCOPROTEIN 6 (PGP6);ATP-BINDING CASSETTE B6 (ABCB6)"]
["AT1G50620","grey","A specific subunit of MINU1/2-associated SWI/SNF (MAS) complexes (PMID:36189880 and PMID:36471048).","ONE PHD FINGERS 1 (OPF1)","PHD DOMAIN-CONTAINING MAS SUBUNIT 1A (PMS1A);ONE PHD FINGERS 1 (OPF1)"]
["AT2G02230","grey","phloem protein 2-B1;(source:Araport11)","PHLOEM PROTEIN 2-B1 (PP2-B1)","PHLOEM PROTEIN 2-B1 (AtPP2-B1);PHLOEM PROTEIN 2-B1 (PP2-B1);ARABIDOPSIS F-BOX PROTEIN HYPERSENSITIVE TO ABA 1 (AFA1)"]
["AT2G32830","grey","Encodes Pht1;5, a member of the Pht1 family of phosphate transporters which include: Pht1;1/At5g43350, Pht1;2/At5g43370, Pht1;3/At5g43360, Pht1;4/At2g38940, Pht1;5/At2g32830, Pht1;6/At5g43340, Pht1;7/At3g54700, Pht1;8/At1g20860, Pht1;9/At1g76430 (Plant Journal 2002, 31:341).","PHOSPHATE TRANSPORTER 1;5 (PHT1;5)","PHOSPHATE TRANSPORTER 5 (PHT5);PHOSPHATE TRANSPORTER 1;5 (PHT1;5)"]
["AT1G68000","grey","phosphatidylinositol synthase 1","PHOSPHATIDYLINOSITOL SYNTHASE 1 (PIS1)","PHOSPHATIDYLINOSITOL SYNTHASE 1 (ATPIS1);PHOSPHATIDYLINOSITOL SYNTHASE 1 (PIS1);PHOSPHATIDYLINOSITOL SYNTHASE (ATPIS)"]
["AT4G16700","grey","Encodes a mitochondrial phosphatidylserine decarboxylase. Expressed mainly in roots and flowers.","PHOSPHATIDYLSERINE DECARBOXYLASE 1 (PSD1)","PHOSPHATIDYLSERINE DECARBOXYLASE 1 (PSD1)"]
["AT1G15110","grey","PSS1 encodes a base-exchange-type Phosphatidylserine (PS) synthase. Mutant analysis revealed its role in pollen maturation.","PHOSPHATIDYLSERINE SYNTHASE 1 (PSS1)","PHOSPHATIDYLSERINE SYNTHASE 1 (PSS1); (ATPSS1);PHYTOPHTHORA SOJAE SUSCEPTIBLE 1 (PSS1)"]
["AT5G61580","grey","Phosphofructokinase Isoform.","PHOSPHOFRUCTOKINASE 4 (PFK4)","PHOSPHOFRUCTOKINASE 4 (PFK4)"]
["AT4G32840","grey","phosphofructokinase 6;(source:Araport11)","PHOSPHOFRUCTOKINASE 6 (PFK6)","PHOSPHOFRUCTOKINASE 6 (PFK6)"]
["AT1G78050","grey","phosphoglycerate/bisphosphoglycerate mutase;(source:Araport11)","PHOSPHOGLYCERATE/BISPHOSPHOGLYCERATE MUTASE (PGM)","PHOSPHOGLYCERATE/BISPHOSPHOGLYCERATE MUTASE (PGM)"]
["AT3G08510","grey","Phosphoinositide-specific phospholipase C (PI-PLC), catalyzes hydrolysis of phosphatidylinositol 4,5-bisphosphate into inositol 1,4,5-trisphosphate and diacylglycerol. It is involved in auxin biosynthesis and signaling, modulating development of both male and female gametophytes. It also regulates MAMP-triggered immunity by modulating ROS production.","PHOSPHOLIPASE C 2 (PLC2)","PHOSPHOLIPASE C 2 (ATPLC2);PHOSPHOLIPASE C 2 (PLC2)"]
["AT4G11830","grey","Encodes one of three phospholipase D enzymes of the gamma class.","PHOSPHOLIPASE D GAMMA 2 (PLDGAMMA2)","PHOSPHOLIPASE D GAMMA 2 (PLDGAMMA2)"]
["AT1G04010","grey","Encodes aphosphoserine aminotransferase, the second enzyme of the phosphorylation pathway of L-serine biosynthesis.","PHOSPHOLIPID STEROL ACYL TRANSFERASE 1 (PSAT1)","PHOSPHOLIPID STEROL ACYL TRANSFERASE 1 (PSAT1); (ATPSAT1);ENHANCED RESPONSE TO PHYTOPHTHORA 1 (ERP1)"]
["AT4G35630","grey","Encodes a phosphoserine aminotransferase which is involved in serine biosynthesis in the chloroplast which operates via the phosphorylated pathway. The mRNA is cell-to-cell mobile.","PHOSPHOSERINE AMINOTRANSFERASE 1 (PSAT1)","PHOSPHOSERINE AMINOTRANSFERASE 1 (PSAT1)"]
["AT1G12370","grey","encodes an amino acid sequence with significant homology to the recently characterized type II photolyases. The uvr2-1 mutant is unable to remove CPDs in vivo, and plant extracts lack detectable photolyase activity , is sensitive to UV-B and is an allele","PHOTOLYASE 1 (PHR1)","PHOTOLYASE 1 (PHR1);UV RESISTANCE 2 (UVR2)"]
["AT5G18190","grey","Casein kinase involved in phosphorylation and ubiquination of RYR/PYLs, resulting in negative regulation of ABA response.Also annotated as MUT9-LIKE kinase that functions as H3-T3 specific histone kinase.","PHOTOREGULATORY PROTEIN KINASE 2 (PPK2)","PHOTOREGULATORY PROTEIN KINASE 2 (PPK2);ARABIDOPSIS EL1-LIKE 4 (AEL4);MUT9P-LIKE-KINASE 1 (MLK1)"]
["AT5G29000","grey","MYB-CC family member. PHL1 acts redundantly with PHR1 to regulate responses to Pi starvation.","PHR1-LIKE 1 (PHL1)","PHR1-LIKE 1 (PHL1)"]
["AT4G14150","grey","Microtubule motor kinesin PAKRP1/Kinesin-12A. Together with PAKRP1L/Kinesin-12B, serve as linkers of the plus ends of antiparallel microtubules in the phragmoplast.","PHRAGMOPLAST-ASSOCIATED KINESIN-RELATED PROTEIN 1 (PAKRP1)","PHRAGMOPLAST-ASSOCIATED KINESIN-RELATED PROTEIN 1 (PAKRP1); (KINESIN-12A); (PAKRP1)"]
["AT2G26710","grey","Encodes a member of the cytochrome p450 family that serves as a control point between multiple photoreceptor systems and brassinosteroid signal transduction. Involved in brassinolide metabolism. Mediates response to a variety of light signals including hypocotyl elongation and cotyledon expansion.","PHYB ACTIVATION TAGGED SUPPRESSOR 1 (BAS1)","PHYB ACTIVATION TAGGED SUPPRESSOR 1 (BAS1); (CYP734A1); (CYP72B1)"]
["AT5G07840","grey","Ankyrin repeat family protein;(source:Araport11)","PHYTOCHROME INTERACTING ANKYRIN-REPEAT PROTEIN 1 (PIA1)","PHYTOCHROME INTERACTING ANKYRIN-REPEAT PROTEIN 1 (PIA1)"]
["AT5G61230","grey","Encodes ANK6, a mitochondrial ankyrin repeat protein required for male-female gamete recognition.","ANKYRIN REPEAT PROTEIN 6 (ANK6)","PHYTOCHROME INTERACTING ANKYRIN-REPEAT PROTEIN 2 (PIA2);ANKYRIN REPEAT PROTEIN 6 (ANK6)"]
["AT2G25170","grey","Encodes a SWI/SWF nuclear-localized chromatin remodeling factor of the CHD3 group. Involved in post-germination repression of embryonic development. Acts with GA to establish repression of embryonic genes upon germination. Protein preferentially accumulates in differentiating tissues. Loss of function alleles are associated with expression of embryonic traits in adult plants and derepression of embryonic genes such as PHEROS1. Is an extragenic suppressor of slr2 (SSL2). Mutations in PKL (SSL2) restores lateral root formation in the slr2 mutant slr-1. It was proposed that PKL/SSL2-mediated chromatin remodeling negatively regulates auxin-mediated LR formation in Arabidopsis.The mRNA is cell-to-cell mobile. Regulates plant responses to cold and salt stress.","PICKLE (PKL)","PICKLE (PKL);CYTOKININ-HYPERSENSITIVE 2 (CKH2);GYMNOS (GYM); (CHD3); (CHR6);SUPPRESSOR OF SLR 2 (SSL2);ENHANCED PHOTOMORPHOGENIC 1 (EPP1);HYPERSENSITIVE TO RED AND BLUE 2 (HRB2)"]
["AT2G48060","grey","Similar to mechanically sensitive ion channel identified in mouse. Mutants display root helical growth phenotype in agar media suggesting a role in mechanoperception at the root cap.","(PZO1)","PIEZO1 (PZO1); (PZO1)"]
["AT1G18490","grey","2-aminoethanethiol dioxygenase, putative (DUF1637);(source:Araport11)","PLANT CYSTEINE OXIDASE 3 (PCO3)","PLANT CYSTEINE OXIDASE 3 (PCO3)"]
["AT5G05850","grey","Encodes PIRL1, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction. PIRL1 (AT5G05850) and PIRL9 (AT3G11330) are genetically redundant and are required for differentiation of microspores into pollen.","PLANT INTRACELLULAR RAS GROUP-RELATED LRR 1 (PIRL1)","PLANT INTRACELLULAR RAS GROUP-RELATED LRR 1 (PIRL1)"]
["AT1G73450","grey","Protein kinase superfamily protein;(source:Araport11)","PLANT-SPECIFIC DUAL-SPECIFICITY TYROSINE PHOSPHORYLATION-REGULATED KINASE 2B (DYRKP-2B)","PLANT-SPECIFIC DUAL-SPECIFICITY TYROSINE PHOSPHORYLATION-REGULATED KINASE 2B (DYRKP-2B)"]
["AT4G14713","grey","PPD1 (and its paralog, PPD2) encode plant-specific putative DNA-binding proteins. PPD1 and PPD2 are not found in grasses. Overexpression of PPD reduces lamina size by promoting the early arrest of dispersed meristematic cells DMC proliferation during leaf and silique development. Deletion of the PPD locus increases leaf lamina size and results in dome-shaped rather than flat leaves. Siliques are also altered in shape because of extra lamina growth. The curvature of a deltappd leaf reflects the difference between excess growth of the lamina and a limitation to the extension capacity of its perimeter.","PEAPOD 1 (PPD1)","PLANT-SPECIFIC PUTATIVE DNA-BINDING PROTEIN 1 (PPD1);PEAPOD 1 (PPD1); (TIFY4A)"]
["AT1G06500","grey","Component of MINU-associated SWI/SNF complex, aka MAS complex (PMID: 36189880,PMID:36471048)","PLANT-SPECIFIC SWI/SNF-ASSOCIATED PROTEIN 2 (PSA2)","PLANT-SPECIFIC SWI/SNF-ASSOCIATED PROTEIN 2 (PSA2);SMALL SUBUNIT OF MINU1/2-ASSOCIATED SWI/SNF COMPLEX (SSM)"]
["AT5G16150","grey","Encodes a putative plastidic glucose transporter.","PLASTIDIC GLC TRANSLOCATOR (PGLCT)","PLASTIDIC GLC TRANSLOCATOR (PGLCT);GLUCOSE TRANSPORTER 1 (GLT1)"]
["AT3G53480","grey","Negative regulator of auxin polar transport inhibitors. ABCG37 regulates auxin distribution and homeostasis in roots by excluding IBA from the root apex, but does not act directly in basipetal transport. ABCG37 and ABCG36 act redundantly at outermost root plasma membranes and, transport IBA out of the cells. Also involved in root transmembrane secretion of fluorescent phenolics involved in Fe uptake. The mRNA is cell-to-cell mobile.","ATP-BINDING CASSETTE G37 (ABCG37)","PLEIOTROPIC DRUG RESISTANCE 9 (PDR9);PLEIOTROPIC DRUG RESISTANCE 9 (ATPDR9);ATP-BINDING CASSETTE G37 (ABCG37);POLAR AUXIN TRANSPORT INHIBITOR SENSITIVE 1 (PIS1)"]
["AT3G16650","grey","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)","PLEIOTROPIC REGULATORY LOCUS 2 (PRL2)","PLEIOTROPIC REGULATORY LOCUS 2 (PRL2)"]
["AT1G51190","grey","Encodes a member of the AINTEGUMENTA-like (AIL) subclass of the AP2/EREBP family of transcription factors and is essential for quiescent center (QC) specification and stem cell activity. It is a key effector for establishment of the stem cell niche during embryonic pattern formation. It is transcribed in response to auxin accumulation and is dependent on auxin response transcription factors.","PLETHORA 2 (PLT2)","PLETHORA 2 (PLT2)"]
["AT3G22200","grey","Genetically redundant with POP3;mediates pollen tube guidance. Double mutants are self sterile; gamma-aminobutyrate transaminase subunit precursor; nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense.","POLLEN-PISTIL INCOMPATIBILITY 2 (POP2)","POLLEN-PISTIL INCOMPATIBILITY 2 (POP2)"]
["AT2G25850","grey","Encodes a poly(A) polymerase. Located in the nucleus.","POLY(A) POLYMERASE 2 (PAPS2)","POLY(A) POLYMERASE 2 (PAPS2)"]
["AT1G31830","grey","Encodes POLYAMINE UPTAKE TRANSPORTER 2, an amino acid permease family protein.","POLYAMINE UPTAKE TRANSPORTER 2 (PUT2)","POLYAMINE UPTAKE TRANSPORTER 2 (PUT2); (ATPUT2);PARAQUAT-RESISTANT 2 (PQR2)"]
["AT4G33440","grey","Putative membrane-bound polygalacturonase from clade F carrying probable hydrophobic transmembrane regions and N-terminal cytoplasmic tail with 3 or more amino acid residues.","POLYGALACTURONASE CLADE F 14 (PGF14)","POLYGALACTURONASE CLADE F 14 (PGF14)"]
["AT5G51700","grey","Encodes a resistance signalling protein with two zinc binding (CHORD) domains that are highly conserved across eukaryotic phyla. Mutant has reduced RPS5 and RPM1 mediated resistance. Potentially involved in transduction of R gene mediated disease resistance. Required for R protein accumulation.","PPHB SUSCEPTIBLE 2 (PBS2)","PPHB SUSCEPTIBLE 2 (PBS2);REQUIRED FOR MLA12 RESISTANCE 1 (RAR1); (RPR2); (ATRAR1)"]
["AT5G60960","grey","Encodes PNM1 (for PPR protein localized to the nucleus and mitochondria 1), a PPR protein that is dual localized to mitochondria and nuclei. Loss of PNM1 function in mitochondria, but not in nuclei, is lethal for the embryo. In mitochondria, it is associated with polysomes and may play a role in translation.","PPR PROTEIN LOCALIZED TO THE NUCLEUS AND MITOCHONDRIA 1 (PNM1)","PPR PROTEIN LOCALIZED TO THE NUCLEUS AND MITOCHONDRIA 1 (PNM1);RIBOSOMAL PROTEIN ML104 (ML104);RIBOSOMAL PENTATRICOPEPTIDE REPEAT PROTEIN 9 (RPPR9)"]
["AT5G49510","grey","prefoldin 3;(source:Araport11)","PREFOLDIN 3 (PFD3)","PREFOLDIN 3 (PFD3)"]
["AT1G29990","grey","Encodes a cytoplastic protein with similarity to yeast prefoldin6, a subunit of the prefoldin complex. The PFD complex is thought to function along with the TCP ring complex to properly fold microtubule proteins.","PREFOLDIN 6 (PFD6)","PREFOLDIN 6 (PFD6)"]
["AT5G02040","grey","prenylated RAB acceptor 1.A1;(source:Araport11)","PRENYLATED RAB ACCEPTOR 1.A1 (PRA1.A1)","PRENYLATED RAB ACCEPTOR 1.A1 (PRA1.A1)"]
["AT5G05987","grey","prenylated RAB acceptor 1.A2;(source:Araport11)","PRENYLATED RAB ACCEPTOR 1.A2 (PRA1.A2)","PRENYLATED RAB ACCEPTOR 1.A2 (PRA1.A2)"]
["AT3G13720","grey","PRA1 (Prenylated rab acceptor) family protein;(source:Araport11)","(PRA8)","PRENYLATED RAB ACCEPTOR 1.F3 (PRA1.F3); (PRA8)"]
["AT3G13710","grey","prenylated RAB acceptor 1.F4;(source:Araport11)","PRENYLATED RAB ACCEPTOR 1.F4 (PRA1.F4)","PRENYLATED RAB ACCEPTOR 1.F4 (PRA1.F4)"]
["AT4G27540","grey","prenylated RAB acceptor 1.H;(source:Araport11)","PRENYLATED RAB ACCEPTOR 1.H (PRA1.H)","PRENYLATED RAB ACCEPTOR 1.H (PRA1.H)"]
["AT3G19170","grey","Zinc metalloprotease pitrilysin subfamily A. Signal peptide degrading enzyme targeted to mitochondria and chloroplasts. Expressed only in siliques and flowers","PRESEQUENCE PROTEASE 1 (PREP1)","PRESEQUENCE PROTEASE 1 (ATPREP1); (ATZNMP);PRESEQUENCE PROTEASE 1 (PREP1)"]
["AT5G56600","grey","Encodes profilin3, a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Originally known as profilin5, and later named profilin3. Expressed in vegetative organs. Mutants have slightly elongated petioles.","PROFILIN 3 (PRF3)","PROFILIN 3 (PFN3);PROFILIN 3 (PRF3)"]
["AT1G29850","grey","Encodes a protein that by its interaction with HAM acetyltransferases plays an important role during DNA damage responses induced by UV-B radiation and participates in programmed cell death programs.","PROGRAMMED CELL DEATH PROTEIN 5 (PDCD5)","PROGRAMMED CELL DEATH PROTEIN 5 (PDCD5); (ATPDCD5)"]
["AT4G32710","grey","Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807).","PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 14 (PERK14)","PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 14 (PERK14)"]
["AT5G38560","grey","Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807).","PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 8 (PERK8)","PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 8 (PERK8);PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 8 (AtPERK8)"]
["AT5G23720","grey","Encodes a protein tyrosine phosphatase Propyzamide-Hypersensitive 1 (PHS1). One of the mutant alleles, phs1-1, is hypersensitive to the microtubule-destabilizing drug propyzamide, suggesting that PHS1 may be involved in phosphorylation cascades that control the dynamics of cortical microtubules in plant cells. A second allele, phs1-3, is hypersensitive to abscisic acid, indicating a possible involvement of PHS1 in ABA signalling.","PROPYZAMIDE-HYPERSENSITIVE 1 (PHS1)","PROPYZAMIDE-HYPERSENSITIVE 1 (PHS1)"]
["AT5G35590","grey","Encodes 20S proteasome subunit PAA1 (PAA1).","PROTEASOME ALPHA SUBUNIT A1 (PAA1)","PROTEASOME ALPHA SUBUNIT A1 (PAA1)"]
["AT1G21720","grey","20S proteasome beta subunit PBC1 truncated protein (PBC1)","PROTEASOME BETA SUBUNIT C1 (PBC1)","PROTEASOME BETA SUBUNIT C1 (PBC1)"]
["AT5G04270","grey","DHHC-type zinc finger family protein;(source:Araport11)","PROTEIN ACYL TRANSFERASE 15 (PAT15)","PROTEIN ACYL TRANSFERASE 15 (PAT15)"]
["AT3G60800","grey","Encodes a protein S-acyltransferase that, together with PAT13, cooperatively regulates leaf senescence.","PROTEIN ACYLTRANSFERASE 14 (PAT14)","PROTEIN ACYLTRANSFERASE 14 (PAT14)"]
["AT5G53920","grey","Protein methyltransferase. One target is PRPL11 which it methylates on Lys 109.","PROTEIN METHYLTRANSFERASE A (PRMA)","PROTEIN METHYLTRANSFERASE A (PRMA)"]
["AT3G09320","grey","PAT13- and PAT16-mediated S-acylation of R5L1 is crucial for its membrane localization to activate the plant defense response.","PROTEIN S-ACYL TRANSFERASE 16 (PAT16)","PROTEIN S-ACYL TRANSFERASE 16 (PAT16)"]
["AT5G03420","grey","Encodes a chloroplast-localized CBM48-containing protein that is involved in starch granule initiation. Mutants lacking PTST3 have fewer starch granules in leaf chloroplasts than the wild type. PTST3 interacts with PTST2, which is also involved in granule initiation.","PROTEIN TARGETING TO STARCH 3 (PTST3)","PROTEIN TARGETING TO STARCH 3 (PTST3)"]
["AT5G62130","grey","Required for the efficient transport of GPI-anchored proteins from the ER to the plasma membrane/cell wall. In addition, loss of function of PGAP3A increases susceptibility to salt and osmotic stresses that may be due to the altered localization of GPI-APs in this mutant. Subcellular localization studies suggest that PGAP3A and PGAP3B cycle between the ER and the Golgi apparatus.","PROTEINS PHOSPHOLIPASE 3A (PGAP3A)","PROTEINS PHOSPHOLIPASE 3A (PGAP3A)"]
["AT3G21200","grey","Encodes a soluble glutamyl-tRNA reductase (GluTR) binding protein that forms a ternary complex with FLU and GluTR.","PROTON GRADIENT REGULATION 7 (PGR7)","PROTON GRADIENT REGULATION 7 (PGR7);GLUTR BINDING PROTEIN (GLUTRBP);GLUTR BINDING PROTEIN (GBP)"]
["AT4G27500","grey","interacts with H+-ATPase, and regulates its activity The mRNA is cell-to-cell mobile.","PROTON PUMP INTERACTOR 1 (PPI1)","PROTON PUMP INTERACTOR 1 (PPI1)"]
["AT1G30755","grey","elongation factor G, putative (DUF668);(source:Araport11)","PSK SIMULATOR 2 (PSI2)","PSK SIMULATOR 2 (PSI2)"]
["AT5G04360","grey","Encodes an enzyme thought to be involved in the hydrolysis of the &#945;-1,6 linkages during starch degradation in seed endosperm. However, a knockout mutant of Arabidopsis lacking limit dextrinase has normal rates of starch degradation in the leaf at night, indicating that more than one isoamylases might be involved in this process.","LIMIT DEXTRINASE (LDA)","PULLULANASE 1 (ATPU1);LIMIT DEXTRINASE (LDA);PULLULANASE 1 (PU1);LIMIT DEXTRINASE (ATLDA)"]
["AT1G28230","grey","Encodes a transporter that transports purines,cytokinins and other adenine derivatives. Expressed in the leaf hydathodes where it may be involved in re-uptake of cytokinins during guttation.","PURINE PERMEASE 1 (PUP1)","PURINE PERMEASE 1 (PUP1); (ATPUP1)"]
["AT1G57990","grey","Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.","PURINE PERMEASE 18 (PUP18)","PURINE PERMEASE 18 (ATPUP18);PURINE PERMEASE 18 (PUP18)"]
["AT1G09530","grey","Transcription factor interacting with photoreceptors phyA and phyB. Forms a ternary complex in vitro with G-box element of the promoters of LHY, CCA1. Acts as a negative regulator of phyB signalling. It degrades rapidly after irradiation of dark grown seedlings in a process controlled by phytochromes. Does not play a significant role in controlling light input and function of the circadian clockwork. Binds to G- and E-boxes, but not to other ACEs. Binds to anthocyanin biosynthetic genes in a light- and HY5-independent fashion. PIF3 function as a transcriptional activator can be functionally and mechanistically separated from its role in repression of PhyB mediated processes.","PHYTOCHROME INTERACTING FACTOR 3 (PIF3)","PURPLE ACID PHOSPHATASE 3 (PAP3);PHYTOCHROME INTERACTING FACTOR 3 (PIF3);PHOTOCURRENT 1 (POC1);PHYTOCHROME-ASSOCIATED PROTEIN 3 (PAP3)"]
["AT4G18620","grey","Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.","PYR1-LIKE 13 (PYL13)","PYR1-LIKE 13 (PYL13);REGULATORY COMPONENTS OF ABA RECEPTOR 7 (RCAR7)"]
["AT2G26040","grey","Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.","PYR1-LIKE 2 (PYL2)","PYR1-LIKE 2 (PYL2);REGULATORY COMPONENTS OF ABA RECEPTOR 14 (RCAR14)"]
["AT4G17870","grey","Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.","PYRABACTIN RESISTANCE 1 (PYR1)","PYRABACTIN RESISTANCE 1 (PYR1);REGULATORY COMPONENT OF ABA RECEPTOR 11 (RCAR11)"]
["AT4G33070","grey","Encodes hypoxia and drought induced pyruvate decarboxylase, which catalyzes the first step in ethanolic fermentation.","PYRUVATE DECARBOXYLASE 1 (PDC1)","PYRUVATE DECARBOXYLASE 1 (PDC1); (ATPDC1)"]
["AT1G49890","grey","Together with QWRF1 redundantly modulates cortical microtubule arrangement in floral organ growth and fertility.","QWRF DOMAIN CONTAINING 2 (QWRF2)","QWRF DOMAIN CONTAINING 2 (QWRF2)"]
["AT5G53570","grey","Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11)","RAB GTPASE-ACTIVATING PROTEIN 22 (RABGAP22)","RAB GTPASE-ACTIVATING PROTEIN 22 (RABGAP22)"]
["AT4G35020","grey","A member of ROP GTPase gene family; Encodes a Rho-like GTP binding protein.","RAC-LIKE 3 (RAC3)","RAC-LIKE 3 (RAC3); (RHO1PS); (ATROP6);RHO-RELATED PROTEIN FROM PLANTS 6 (ROP6);RAC-LIKE 3 (ARAC3)"]
["AT1G79650","grey","Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.","RADIATION SENSITIVE23B (RAD23B)","RADIATION SENSITIVE23B (RAD23B);ARABIDOPSIS THALIANA ALDEHYDE OXIDASE 1 (AtAO1)"]
["AT3G18610","grey","Encodes ATNUC-L2 (NUCLEOLIN LIKE 2).","NUCLEOLIN LIKE 2 (NUC-L2)","RAN GTPASE-ACTIVATING PROTEIN 1 (ATRANGAP1);PARALLEL1-LIKE 1 (PARLL1);NUCLEOLIN LIKE 2 (NUC-L2);NUCLEOLIN 2 (NUC2);NUCLEOLIN LIKE 2 (ATNUC-L2)"]
["AT3G05880","grey","Induced by low temperatures, dehydration and salt stress and ABA. Encodes a small (54 amino acids), highly hydrophobic protein that bears two potential transmembrane domains.","RARE-COLD-INDUCIBLE 2A (RCI2A)","RARE-COLD-INDUCIBLE 2A (RCI2A)"]
["AT3G24560","grey","novel gene involved in embryogenesis","RASPBERRY 3 (RSY3)","RASPBERRY 3 (RSY3)"]
["AT2G02070","grey","RAVEN is part of the network regulated by BLJUEJAY, JACKDAW, SACRECROW and SHORT-ROOT to regulate root tissue patterning through cell lineage specification and asymmetric cell division. RAVEN is directly activated by SHORT-ROOT and directly repressed by JACKDAW.","INDETERMINATE(ID)-DOMAIN 5 (IDD5)","RAVEN (RVN);INDETERMINATE(ID)-DOMAIN 5 (AtIDD5);INDETERMINATE(ID)-DOMAIN 5 (IDD5)"]
["AT5G48330","grey","Regulator of chromosome condensation (RCC1) family protein;(source:Araport11)","RCC1/UVR8/GEF-LIKE 2 (RUG2)","RCC1/UVR8/GEF-LIKE 2 (RUG2)"]
["AT1G74180","grey","receptor like protein 14;(source:Araport11)","RECEPTOR LIKE PROTEIN 14 (RLP14)","RECEPTOR LIKE PROTEIN 14 (AtRLP14);RECEPTOR LIKE PROTEIN 14 (RLP14)"]
["AT3G11080","grey","receptor like protein 35;(source:Araport11)","RECEPTOR LIKE PROTEIN 35 (RLP35)","RECEPTOR LIKE PROTEIN 35 (AtRLP35);RECEPTOR LIKE PROTEIN 35 (RLP35)"]
["AT3G02130","grey","Encodes a receptor-like kinase RPK2 (also known as TOADSTOOL 2/TOAD2). Functions as a regulator of meristem maintenance. Mutants are insensitive to synthetic CLV3 peptide. Mutations in the RPK2 also result in stem cell expansion and increased number of floral organs, as seen in the other clv mutants. Forms homo-oligomers.","RECEPTOR-LIKE PROTEIN KINASE 2 (RPK2)","RECEPTOR-LIKE PROTEIN KINASE 2 (RPK2);TOADSTOOL 2 (TOAD2);CLV3 PEPTIDE INSENSITIVE 1 (CLI1)"]
["AT4G00340","grey","Encodes a receptor-like protein kinase that is expressed in roots. Positively regulates pollen hydration on stigmas as a PCP-B&#946; receptor.","RECEPTOR-LIKE PROTEIN KINASE 4 (RLK4)","RECEPTOR-LIKE PROTEIN KINASE 4 (RLK4); (pcp b&#946;); (SD-RLK28)"]
["AT1G31360","grey","Encodes a (d)NTP-dependent 3 Prime->5 Prime DNA helicase. This protein can also disrupt D loop structures and may mediate branch migration of Holliday junctions when tested in vitro. The unwinding activity of the enzyme depends on the presence of divalent cations (Mg2+, Mn2+, or Ca2+, but not Zn2+).(d)NTPs are also required with ATP and dATP supporting the greatest amount of DNA unwinding in vitro.","RECQ HELICASE L2 (RECQL2)","RECQ HELICASE L2 (RECQL2)"]
["AT1G60930","grey","AtRECQ4B mutant showed no sensitivity to DNA damaging agents.Involved in homologous recombination.","RECQ HELICASE L4B (RECQ4B)","RECQ HELICASE L4B (RECQ4B);RECQ HELICASE L4B (RECQL4B);RECQ HELICASE L4B (ATRECQ4B)"]
["AT1G10090","grey","Early-responsive to dehydration stress protein (ERD4);(source:Araport11)","REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 2.2 (OSCA2.2)","REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 2.2 (OSCA2.2)"]
["AT1G30360","grey","Early-responsive to dehydration stress protein (ERD4);(source:Araport11)","EARLY-RESPONSIVE TO DEHYDRATION 4 (ERD4)","REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 3.1 (OSCA3.1);EARLY-RESPONSIVE TO DEHYDRATION 4 (ERD4)"]
["AT1G64520","grey","regulatory particle non-ATPase 12A;(source:Araport11)","REGULATORY PARTICLE NON-ATPASE 12A (RPN12a)","REGULATORY PARTICLE NON-ATPASE 12A (RPN12a)"]
["AT3G05530","grey","Encodes RPT5a (Regulatory Particle 5a), one of the six AAA-ATPases of the proteasome regulatory particle. Essential for gametophyte development. In Arabidopsis, the RPT5 subunit is encoded by two highly homologous genes, RPT5a and RPT5b. RPT5a and RPT5b show accession-dependent functional redundancy. In Wassilewskija (Ws) accession: mutant alleles of RPT5a displayed 50% pollen lethality, indicating that RPT5a is essential for male gametophyte development. In the Columbia (Col) accession, a rpt5a mutant allele did not display such a phenotype because the RPT5b Col allele complements the rpt5a defect in the male gametophyte, whereas the RPT5b Ws allele does not. Double rpt5a rpt5b mutants in Col background showed a complete male and female gametophyte lethal phenotype. The mRNA is cell-to-cell mobile.","REGULATORY PARTICLE TRIPLE-A ATPASE 5A (RPT5A)","REGULATORY PARTICLE TRIPLE-A ATPASE 5A (RPT5A); (ATS6A.2)"]
["AT1G43160","grey","encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family (RAP2.6). The protein contains one AP2 domain. There are 7 members in this subfamily.","RELATED TO AP2 6 (RAP2.6)","RELATED TO AP2 6 (RAP2.6);ETHYLENE RESPONSIVE FACTOR113 (ERF113)"]
["AT3G57540","grey","Remorin family protein;(source:Araport11)","REMORIN GROUP 4 1 (REM4.1)","REMORIN GROUP 4 1 (REM4.1); (ATREM4.1)"]
["AT5G22010","grey","Encodes RFC1, the largest subunit of replication factor C. Mediates genomic stability and transcriptional gene silencing.","REPLICATION FACTOR C1 (RFC1)","REPLICATION FACTOR C1 (AtRFC1);REPLICATION FACTOR C1 (RFC1);REPLICATION FACTOR C 1 (RFC1)"]
["AT3G62270","grey","BOR2 is involved in efficient borate crosslinking of rhamnogalacturonan II in cell walls under boron limitation.","REQUIRES HIGH BORON 2 (BOR2)","REQUIRES HIGH BORON 2 (BOR2)"]
["AT3G07040","grey","Contains an N-terminal tripartite nucleotide binding site and a C-terminal tandem array of leucine-rich repeats. Confers resistance to Pseudomonas syringae strains that carry the avirulence genes avrB and avrRpm1.","RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1)","RESISTANCE TO P. SYRINGAE PV MACULICOLA 1 (RPM1);RESISTANCE TO PSEUDOMONAS SYRINGAE 3 (RPS3)"]
["AT4G02820","grey","Pentatricopeptide repeat (PPR) protein involved in mitochondrial mRNA splicing. Loss of function increases ROS production leading to increased resistance to pathogens.","RESISTANCE TO PHYTOPHTHORA PARASITICA 7 (RTP7)","RESISTANCE TO PHYTOPHTHORA PARASITICA 7 (RTP7)"]
["AT5G05630","grey","Encodes POLYAMINE UPTAKE TRANSPORTER 3, an amino acid permease family protein.","RESISTANT TO METHYL VIOLOGEN 1 (RMV1)","RESISTANT TO METHYL VIOLOGEN 1 (RMV1);OWER EXPRESSION OF HEAT RESPONSIVE GENE1 (LHR1);L-AMINO ACID TRANSPORTER1 (LAT1);POLYAMINE UPTAKE TRANSPORTER 3 (PUT3)"]
["AT5G47910","grey","NADPH/respiratory burst oxidase protein D (RbohD).Interacts with AtrbohF gene to fine tune the spatial control of ROI production and hypersensitive response to cell in and around infection site. The mRNA is cell-to-cell mobile.","RESPIRATORY BURST OXIDASE HOMOLOGUE D (RBOHD)","RESPIRATORY BURST OXIDASE HOMOLOGUE D (RBOHD); (DELT1); (ATRBOHD)"]
["AT4G31920","grey","Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Also involved in cytokinin-dependent inhibition of hypocotyl elongation and cytokinin-dependent greening and shooting in tissue culture. ARR1, ARR10, and ARR12 are redundant regulators of drought response, with ARR1 being the most critical. ARR1, ARR10 and ARR12 redundantly bind to the promoter of WUSCHEL (WUS), directly activate its transcription. In parallel, ARR1, ARR10 and ARR12 repress the expression of YUCCAs (YUCs), which encode a key enzyme for auxin biosynthesis, indirectly promoting WUS induction. The regulation of ARR1, ARR10 and ARR12 on WUS and YUCs is required for regeneration and maintenance of shoot meristem.","RESPONSE REGULATOR 10 (RR10)","RESPONSE REGULATOR 10 (ARR10);RESPONSE REGULATOR 10 (RR10)"]
["AT2G25180","grey","Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Also involved in cytokinin-dependent inhibition of hypocotyl elongation and cytokinin-dependent greening and shooting in tissue culture. ARR1, ARR10, and ARR12 are redundant regulators of drought response, with ARR1 being the most critical.The retention of leaf water content, maintenance of cell membrane stability, and enhancement of anthocyanin biosynthesis were found to contribute to the enhanced drought tolerance of the arr1,10,12 triple mutant. ARR1, ARR10 and ARR12 redundantly bind to the promoter of WUSCHEL (WUS), directly activate its transcription. In parallel, ARR1, ARR10 and ARR12 repress the expression of YUCCAs (YUCs), which encode a key enzyme for auxin biosynthesis, indirectly promoting WUS induction. The regulation of ARR1, ARR10 and ARR12 on WUS and YUCs is required for regeneration and maintenance of shoot meristem.","RESPONSE REGULATOR 12 (RR12)","RESPONSE REGULATOR 12 (ARR12);RESPONSE REGULATOR 12 (RR12); (ATARR12)"]
["AT4G16110","grey","Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity. Also involved in cytokinin-dependent inhibition of hypocotyl elongation.","RESPONSE REGULATOR 2 (RR2)","RESPONSE REGULATOR 2 (ARR2);RESPONSE REGULATOR 2 (RR2)"]
["AT3G49570","grey","RESPONSE TO LOW SULFUR gene family member; expressed during sulfur deficiency.","RESPONSE TO LOW SULFUR 3 (LSU3)","RESPONSE TO LOW SULFUR 3 (LSU3)"]
["AT2G21620","grey","Encodes gene that is induced in response to desiccation; mRNA expression is seen 10 and 24 hrs after start of desiccation treatment.","RESPONSIVE TO DESICCATION 2 (RD2)","RESPONSIVE TO DESICCATION 2 (RD2)"]
["AT4G27410","grey","Encodes a NAC transcription factor induced in response to desiccation. It is localized to the nucleus and acts as a transcriptional activator in ABA-mediated dehydration response.","RESPONSIVE TO DESICCATION 26 (RD26)","RESPONSIVE TO DESICCATION 26 (RD26); (ATRD26); (ANAC72)"]
["AT5G59820","grey","Encodes a zinc finger protein involved in high light and cold acclimation. Overexpression of this putative transcription factor increases the expression level of 9 cold-responsive genes and represses the expression level of 15 cold-responsive genes, including CBF genes. Also, lines overexpressing this gene exhibits a small but reproducible increase in freeze tolerance. Because of the repression of the CBF genes by the overexpression of this gene, the authors speculate that this gene may be involved in negative regulatory circuit of the CBF pathway. The mRNA is cell-to-cell mobile.","RESPONSIVE TO HIGH LIGHT 41 (RHL41)","RESPONSIVE TO HIGH LIGHT 41 (RHL41); (ATZAT12); (ZAT12)"]
["AT4G23630","grey","VIRB2-interacting protein 1;(source:Araport11)","VIRB2-INTERACTING PROTEIN 1 (BTI1)","RETICULAN LIKE PROTEIN B1 (RTNLB1);RETICULON 1 (RTN1);VIRB2-INTERACTING PROTEIN 1 (BTI1)"]
["AT3G56140","grey","DUF399 family protein, putative (DUF399 and DUF3411);(source:Araport11)","RETICULATA-RELATED 6 (RER6)","RETICULATA-RELATED 6 (RER6)"]
["AT5G17300","grey","Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner.","REVEILLE 1 (RVE1)","REVEILLE 1 (RVE1)"]
["AT5G07250","grey","RHOMBOID-like protein 3;(source:Araport11)","RHOMBOID-LIKE PROTEIN 3 (RBL3)","RHOMBOID-LIKE PROTEIN 3 (ATRBL3);RHOMBOID-LIKE PROTEIN 3 (RBL3)"]
["AT3G06040","grey","Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein;(source:Araport11)","RIBOSOMAL PROTEIN BL12MY (BL12MY)","RIBOSOMAL PROTEIN BL12MY (BL12MY)"]
["AT4G23620","grey","Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein;(source:Araport11)","RIBOSOMAL PROTEIN BL25MZ (BL25MZ)","RIBOSOMAL PROTEIN BL25MZ (BL25MZ)"]
["AT5G55125","grey","Ribosomal protein L31;(source:Araport11)","RIBOSOMAL PROTEIN BL31MY (BL31MY)","RIBOSOMAL PROTEIN BL31MY (BL31MY)"]
["AT5G18790","grey","Ribosomal protein L33 family protein;(source:Araport11)","RIBOSOMAL PROTEIN BL33M (BL33M)","RIBOSOMAL PROTEIN BL33M (BL33M)"]
["AT3G26360","grey","Ribosomal protein S21 family protein;(source:Araport11)","RIBOSOMAL PROTEIN BS21M (BS21M)","RIBOSOMAL PROTEIN BS21M (BS21M)"]
["AT3G18760","grey","Translation elongation factor EF1B/ribosomal protein S6 family protein;(source:Araport11)","RIBOSOMAL PROTEIN BS6MZ (BS6MZ)","RIBOSOMAL PROTEIN BS6MZ (BS6MZ)"]
["AT2G21290","grey","30S ribosomal protein S31;(source:Araport11)","RIBOSOMAL PROTEIN BTHXM (BTHXM)","RIBOSOMAL PROTEIN BTHXM (BTHXM)"]
["AT5G15760","grey","Ribosomal protein PSRP-3/Ycf65;(source:Araport11)","PLASTID-SPECI&#64257;C RIBOSOMAL PROTEIN 3/2 (PSRP3/2)","RIBOSOMAL PROTEIN CS23Y (CS23Y);PLASTID-SPECI&#64257;C RIBOSOMAL PROTEIN 3/2 (PSRP3/2)"]
["AT1G29970","grey","60S ribosomal protein L18A-1;(source:Araport11)","60S RIBOSOMAL PROTEIN L18A-1 (RPL18AA)","RIBOSOMAL PROTEIN EL20Z (EL20Z);60S RIBOSOMAL PROTEIN L18A-1 (RPL18AA)"]
["AT4G15000","grey","Ribosomal L27e protein family;(source:Araport11)","RIBOSOMAL PROTEIN EL27X (EL27X)","RIBOSOMAL PROTEIN EL27X (EL27X)"]
["AT2G32220","grey","Ribosomal L27e protein family;(source:Araport11)","RIBOSOMAL PROTEIN EL27Z (EL27Z)","RIBOSOMAL PROTEIN EL27Z (EL27Z)"]
["AT3G02190","grey","Ribosomal protein L39 family protein;(source:Araport11)","RIBOSOMAL PROTEIN EL39Y (EL39Y)","RIBOSOMAL PROTEIN EL39Y (EL39Y)"]
["AT4G34555","grey","Ribosomal protein S25 family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES25X (ES25X)","RIBOSOMAL PROTEIN ES25X (ES25X)"]
["AT2G45710","grey","Zinc-binding ribosomal protein family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES27Z (ES27Z)","RIBOSOMAL PROTEIN ES27Z (ES27Z)"]
["ATMG00210","grey","encodes a mitochondrial ribosomal protein L5, a constituent of the large subunit of the ribosomal complex","RIBOSOMAL PROTEIN L5 (RPL5)","RIBOSOMAL PROTEIN L5 (RPL5);RIBOSOMAL PROTEIN UL5M (UL5M)"]
["AT2G42740","grey","encodes a cytosolic ribosomal protein L16, which is a constituent of 60S large ribosomal complex. Gene is expressed in root stele and anthers and expression is induced by auxin treatment.","RIBOSOMAL PROTEIN LARGE SUBUNIT 16A (RPL16A)","RIBOSOMAL PROTEIN LARGE SUBUNIT 16A (RPL16A);RIBOSOMAL PROTEIN UL5Z (UL5Z)"]
["AT3G51010","grey","protein translocase subunit;(source:Araport11)","RIBOSOMAL PROTEIN ML105 (ML105)","RIBOSOMAL PROTEIN ML105 (ML105)"]
["AT4G05400","grey","copper ion binding protein;(source:Araport11)","RIBOSOMAL PROTEIN ML40 (ML40)","RIBOSOMAL PROTEIN ML40 (ML40)"]
["AT3G18240","grey","Ribosomal protein S24/S35;(source:Araport11)","RIBOSOMAL PROTEIN MS35Z (MS35Z)","RIBOSOMAL PROTEIN MS35Z (MS35Z)"]
["AT1G55890","grey","Ribosomal pentatricopeptide repeat protein","RIBOSOMAL PENTATRICOPEPTIDE REPEAT PROTEIN 3A (RPPR3A)","RIBOSOMAL PROTEIN MS78 (MS78);RIBOSOMAL PENTATRICOPEPTIDE REPEAT PROTEIN 3A (RPPR3A)"]
["AT3G22300","grey","Nuclear-encoded gene for mitochondrial ribosomal small subunit protein S10","RIBOSOMAL PROTEIN S10 (RPS10)","RIBOSOMAL PROTEIN S10 (RPS10);RIBOSOMAL PROTEIN US10M (US10M)"]
["AT3G03600","grey","Structural component of the mitochondrial ribosome small subunit","RIBOSOMAL PROTEIN S2 (RPS2)","RIBOSOMAL PROTEIN S2 (RPS2);RIBOSOMAL PROTEIN US2M (US2M)"]
["AT3G12370","grey","Ribosomal protein L10 family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL10M (UL10M)","RIBOSOMAL PROTEIN UL10M (UL10M)"]
["AT3G01790","grey","Ribosomal protein L13 family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL13M (UL13M)","RIBOSOMAL PROTEIN UL13M (UL13M)"]
["AT5G64670","grey","Ribosomal protein L18e/L15 superfamily protein;(source:Araport11)","RIBOSOMAL PROTEIN UL15M (UL15M)","RIBOSOMAL PROTEIN UL15M (UL15M)"]
["AT1G31817","grey","Ribosomal L18p/L5e family protein;(source:Araport11)","NUCLEAR FUSION DEFECTIVE 3 (NFD3)","RIBOSOMAL PROTEIN US11M (US11M);NUCLEAR FUSION DEFECTIVE 3 (NFD3)"]
["AT3G44010","grey","Ribosomal protein S14p/S29e family protein;(source:Araport11)","RIBOSOMAL PROTEIN US14Y (US14Y)","RIBOSOMAL PROTEIN US14Y (US14Y)"]
["AT5G47320","grey","Nuclear encoded mitochondrial ribosome subunit. The mRNA is cell-to-cell mobile.","RIBOSOMAL PROTEIN S19 (RPS19)","RIBOSOMAL PROTEIN US19M (US19M);RIBOSOMAL PROTEIN S19 (RPS19)"]
["ATMG00020","grey","mitochondrial 26S ribosomal RNA protein","RIBOSOMAL RNA26S (RRN26)","RIBOSOMAL RNA26S (RRN26)"]
["AT4G03510","grey","RMA1 encodes a novel 28 kDa protein with a RING finger motif and a C-terminal membrane-anchoring domain that is involved in the secretory pathway. Has E3 ubiquitin ligase activity.","RING MEMBRANE-ANCHOR 1 (RMA1)","RING MEMBRANE-ANCHOR 1 (RMA1); (ATRMA1)"]
["AT4G28270","grey","Encodes a RING finger E3 ubiquitin ligase. Binds and ubiquitinates ABP1 in vivo and in vitro.","RING MEMBRANE-ANCHOR 2 (RMA2)","RING MEMBRANE-ANCHOR 2 (RMA2); (ATRMA2)"]
["AT2G17450","grey","Encodes a putative RING-H2 finger protein RHA3a.","RING-H2 FINGER A3A (RHA3A)","RING-H2 FINGER A3A (RHA3A);ARABIDOPSIS T??XICOS EN LEVADURA 44 (ATL44)"]
["AT4G35480","grey","Encodes a putative RING-H2 finger protein RHA3b.","RING-H2 FINGER A3B (RHA3B)","RING-H2 FINGER A3B (RHA3B);ARABIDOPSIS T??XICOS EN LEVADURA 45 (ATL45)"]
["AT2G40830","grey","Encodes an E3 ubiquitin ligase for the GA-receptor GID1 that functions as a negative regulator of GA signaling in seedlings and seeds by inducing ubiquitin-dependent proteolysis of GID1s. Tyr321 phosphorylation of GARU by TAGK2 inactivates GARU.","RING-H2 FINGER C1A (RHC1A)","RING-H2 FINGER C1A (RHC1A);BCA2A ZINC FINGER ATL 1 (BTL01);ABA-INSENSITIVE RING PROTEIN 5 (AIRP5);GA RECEPTOR RING E3 UBIQUITIN LIGASE (GARU)"]
["AT2G39720","grey","Encodes a putative RING-H2 finger protein RHC2a.","RING-H2 FINGER C2A (RHC2A)","RING-H2 FINGER C2A (RHC2A);BCA2A ZINC FINGER ATL 11 (BTL11)"]
["AT5G65900","grey","DEA(D/H)-box RNA helicase family protein;(source:Araport11)","RNA DEAD-BOX HELICASE 27 (RH27)","RNA DEAD-BOX HELICASE 27 (RH27)"]
["AT3G58510","grey","DEA(D/H)-box RNA helicase family protein;(source:Araport11)","RNA HELICASE 11 (RH11)","RNA HELICASE 11 (RH11)"]
["AT3G61240","grey","Immunoprecipitation with mRNA decapping complex members DCP1 and DCP2.","RNA HELICASE 12 (RH12)","RNA HELICASE 12 (RH12)"]
["AT5G63120","grey","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","RNA HELICASE 30 (RH30)","RNA HELICASE 30 (RH30)"]
["AT2G42520","grey","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","RNA HELICASE 37 (RH37)","RNA HELICASE 37 (RH37)"]
["AT3G06480","grey","DEAD box RNA helicase family protein;(source:Araport11)","RNA HELICASE 40 (RH40)","RNA HELICASE 40 (RH40)"]
["AT1G28060","grey","Pre-mRNA-splicing factor 3;(source:Araport11)","RNA-DIRECTED DNA METHYLATION 16 (RDM16)","RNA-DIRECTED DNA METHYLATION 16 (RDM16)"]
["AT1G80650","grey","RNAse THREE-like protein 1;(source:Araport11)","RNASE THREE-LIKE PROTEIN 1 (RTL1)","RNASE THREE-LIKE PROTEIN 1 (RTL1)"]
["AT4G05390","grey","Encodes a root-type ferredoxin:NADP(H) oxidoreductase.","ROOT FNR 1 (RFNR1)","ROOT FNR 1 (ATRFNR1);ROOT FNR 1 (RFNR1)"]
["AT5G51451","grey","Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).","ROOT MERISTEM GROWTH FACTOR 5 (RGF5)","ROOT MERISTEM GROWTH FACTOR 5 (RGF5);CLE-LIKE7 (CLEL7);GOLVEN 10 (GLV10)"]
["AT4G33495","grey","A member of the RPD gene family - there are13 annotated genes and one EST encoding RPD1-like proteins in Arabidopsis. Shows no homology to any protein of known function. Abundant expression found in the shoot apex and the root. rpd1 mutant is a temperature-sensitive mutant isolated on the basis of the impairment in adventitious roots formation in hypocotyl region. Also, disruption of the RPD1 gene by a T-DNA insertion caused embryogenesis arrest at the globular to transition stages. This phenotype is consistent with the hypothesized function of RPD1 in the maintenance of active cell proliferation.","ROOT PRIMORDIUM DEFECTIVE 1 (RPD1)","ROOT PRIMORDIUM DEFECTIVE 1 (RPD1)"]
["AT3G11490","grey","ROP (Rho of plant GTPases) family member Involved in cell wall patterning. Encodes ROP inactivator, regulates the formation of ROP-activated domains; these in turn determined the pattern of cell wall pits. Positively regulates pit formation, but negatively regulates pit size, required for periodic formation of secondary cell wall pits.","ROP GUANOSINE TRIPHOSPHATASE (GTPASE)-ACTIVATING PROTEIN 4 (ROPGAP4)","ROP GUANOSINE TRIPHOSPHATASE (GTPASE)-ACTIVATING PROTEIN 4 (ROPGAP4)"]
["AT1G13245","grey","ROTUNDIFOLIA like 17;(source:Araport11)","ROTUNDIFOLIA LIKE 17 (RTFL17)","ROTUNDIFOLIA LIKE 17 (RTFL17);DEVIL 4 (DVL4)"]
["AT5G10350","grey","Encodes a nuclear-localized RNA recognition motif-containing protein that forms homodimers. It interacts with telomere and non-telomere associated proteins. Null mutation does not result in changes in telomerase activity or telomere length.","RRM-CONTAINING PROTEIN (RRM)","RRM-CONTAINING PROTEIN (RRM)"]
["AT3G51040","grey","Encodes a protein of 231 amino acids with 51% identity to RTE1 over 209 amino acids. Interacts with RTE1 in planta and appears to function in same pathway to positively regulate ethylene signaling.","RTE1-HOMOLOG (RTH)","RTE1-HOMOLOG (RTH)"]
["AT4G36800","grey","RUB1 conjugating enzyme that conjugates CUL1 and is involved in auxin response and embryogenesis. RCE1 protein physically interacts with RBX1, which may be the E3 for CUL1.","RUB1 CONJUGATING ENZYME 1 (RCE1)","RUB1 CONJUGATING ENZYME 1 (RCE1)"]
["AT3G10730","grey","Encodes a member of the Sad1/UNC-84 (SUN)-domain proteins: AtSUN1(At5g04990), AtSUN2(AT3G10730). SUN domain proteins are part of the cytoskeletal-nucleoskeletal bridging complexes. AtSUN1 and AtSUN2 are localized to the nuclear envelope and are present as homomers and heteromers in vivo.","SAD1/UNC-84 DOMAIN PROTEIN 2 (SUN2)","SAD1/UNC-84 DOMAIN PROTEIN 2 (SUN2);ARABIDOPSIS SAD1/UNC-84 DOMAIN PROTEIN 2 (ATSUN2)"]
["AT1G30835","grey","Member of Sadhu non-coding retrotransposon family The mRNA is cell-to-cell mobile.","SADHU NON-CODING RETROTRANSPOSON 1-2 (SADHU1-2)","SADHU NON-CODING RETROTRANSPOSON 1-2 (SADHU1-2)"]
["AT3G13438","grey","Member of Sadhu non-coding retrotransposon family","SADHU NON-CODING RETROTRANSPOSON 7-1 (SADHU7-1)","SADHU NON-CODING RETROTRANSPOSON 7-1 (SADHU7-1)"]
["AT3G55530","grey","Encodes an intracellular membrane localized protein with E3 ligase activity, found in the ER with the C-terminus facing the cytoplasm. It is involved in regulation of ABA signaling. Loss of function alleles show decreased sensitivity to ABA. Overexpression results in increased sensitivity to ABA.","SALT- AND DROUGHT-INDUCED RING FINGER1 (SDIR1)","SALT- AND DROUGHT-INDUCED RING FINGER1 (SDIR1); (ATSDIR1)"]
["AT5G24270","grey","Encodes a calcium sensor that is essential for K+ nutrition, K+/Na+ selectivity, and salt tolerance. The protein is similar to calcineurin B. Lines carrying recessive mutations are hypersensitive to Na+ and Li+ stresses and is unable to grow in low K+. The growth defect is rescued by extracellular calcium.","SALT OVERLY SENSITIVE 3 (SOS3)","SALT OVERLY SENSITIVE 3 (SOS3);SALT OVERLY SENSITIVE 3 (ATSOS3);CALCINEURIN B-LIKE PROTEIN 4 (CBL4)"]
["AT1G27730","grey","Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.","SALT TOLERANCE ZINC FINGER (STZ)","SALT TOLERANCE ZINC FINGER (STZ); (ZAT10)"]
["AT3G55460","grey","encodes an SC35-like splicing factor that is localized to nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. The mRNA is cell-to-cell mobile.","SC35-LIKE SPLICING FACTOR 30 (SCL30)","SC35-LIKE SPLICING FACTOR 30 (SCL30);SC35-LIKE SPLICING FACTOR 30 (At-SCL30)"]
["AT3G13570","grey","encodes an SC35-like splicing factor of 30 kD that is localized to the nuclear specks. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926.","SC35-LIKE SPLICING FACTOR 30A (SCL30A)","SC35-LIKE SPLICING FACTOR 30A (SCL30A);SC35-LIKE SPLICING FACTOR 30A (At-SCL30A)"]
["AT1G12860","grey","Encodes ICE2 (Inducer of CBF Expression 2), a transcription factor of the bHLH family that participates in the response to deep freezing through the cold acclimation-dependent pathway. Overexpression of ICE2 results in increased tolerance to deep freezing stress after cold acclimation.","SCREAM 2 (SCRM2)","SCREAM 2 (SCRM2);INDUCER OF CBF EXPRESSION 2 (ICE2)"]
["AT1G61380","grey","Encodes a membrane localized S-domain receptor kinase that is involved in lipopolysaccharide (LPS) sensing. SD1-29 detected LPS of Pseudomonas and Xanthomonas species for which it serves as a microbe associated molecular pattern triggering innate immunity. Loses of function mutants are hyper susceptible to P.syringae.","S-DOMAIN-1 29 (SD1-29)","S-DOMAIN-1 29 (SD1-29);IPOOLIGOSACCHARIDE-SPECIFIC REDUCED ELICITATION (LORE)"]
["AT3G04240","grey","Protein O-GlcNAc transferase. Together with SPY functions to competitively regulate RGA1 (At2g01570).","SECRET AGENT (SEC)","SECRET AGENT (SEC)"]
["AT4G39180","grey","encodes a protein that complements the function of a sec14(ts) mutant of S. cerevisiae","SECRETION 14 (SEC14)","SECRETION 14 (SEC14);ARABIDOPSIS THALIANA SECRETION 14 (ATSEC14)"]
["AT5G36100","grey","Protein of unknown function that is found on the surfaces of lipid droplets and may function to anchor the droplets to the plasma membrane.","SEED LIPID DROPLET PROTEIN2 (SLDP2)","SEED LIPID DROPLET PROTEIN2 (SLDP2)"]
["AT4G14030","grey","Interacts with RD19c, which is involved in anther development.","SELENIUM-BINDING PROTEIN 1 (SBP1)","SELENIUM-BINDING PROTEIN 1 (SBP1); (ATSBP1)"]
["AT3G02040","grey","Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family. Has glycerophosphodiester phosphodiesterase activity. Functions in maintaining cellular phosphate homeostasis under phosphate starvation. The mRNA is cell-to-cell mobile.","SENESCENCE-RELATED GENE 3 (SRG3)","SENESCENCE-RELATED GENE 3 (SRG3);GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 1 (GDPD1); (AtGDPD1)"]
["AT3G49430","grey","Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926.","SERINE/ARGININE-RICH PROTEIN SPLICING FACTOR 34A (SR34a)","SER/ARG-RICH PROTEIN 34A (SRp34a);SERINE/ARGININE-RICH PROTEIN SPLICING FACTOR 34A (SR34a);SERINE/ARGININE-RICH PROTEIN SPLICING FACTOR 34A (At-SR34a)"]
["AT4G35640","grey","Encodes a cytosolic serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system. Expression is induced in both roots and shoots under sulfur-starved conditions.","SERINE ACETYLTRANSFERASE 3;2 (SERAT3;2)","SERINE ACETYLTRANSFERASE 3;2 (ATSERAT3;2);SERINE ACETYLTRANSFERASE 3;2 (SERAT3;2)"]
["AT5G26780","grey","Encodes a protein with serine hydroxymethyltransferase activity which is thought to be localized in the mitochondrial matrix. SHM2 expression fails to rescue the conditional lethal phenotype of the shm1-1 mutant, defective in SHM1.","SERINE HYDROXYMETHYLTRANSFERASE 2 (SHM2)","SERINE HYDROXYMETHYLTRANSFERASE 2 (SHM2)"]
["AT1G22020","grey","Encodes a putative serine hydroxymethyltransferase; involved in protein ubiquination, histone binding, regulation of DNA methylation, chromatin organization.","SERINE HYDROXYMETHYLTRANSFERASE 6 (SHM6)","SERINE HYDROXYMETHYLTRANSFERASE 6 (SHM6)"]
["AT4G35500","grey","SRPK-family member protein.","SERINE/ARGININE PROTEIN KINASE 1 (SRPK1)","SERINE/ARGININE PROTEIN KINASE 1 (SRPK1)"]
["AT2G17530","grey","SRPK-family member protein.","SERINE/ARGININE PROTEIN KINASE 2 (SRPK2)","SERINE/ARGININE PROTEIN KINASE 2 (SRPK2)"]
["AT1G07350","grey","Encodes a serine/arginine rich-like protein, SR45a. Involved in the regulation of stress-responsive alternative splicing.","SERINE/ARGININE RICH-LIKE PROTEIN 45A (SR45a)","SERINE/ARGININE RICH-LIKE PROTEIN 45A (SR45a)"]
["AT4G31580","grey","Encodes a Serine/arginine-rich (SR) protein RSZp22. SR proteins are splicing regulators that share a modular structure consisting of one or two N-terminal RNA recognition motif domains and a C-terminal RS-rich domain. RSZp22 is located in the nucleolus. It is a nucleocytoplasmic shuttling protein and an interacting partner to the Arabidopsis U1-70K. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926.","RS-CONTAINING ZINC FINGER PROTEIN 22 (RSZ22)","SERINE/ARGININE-RICH 22 (SRZ-22); (SRZ22);RS-CONTAINING ZINC FINGER PROTEIN 22 (RSZP22);RS-CONTAINING ZINC FINGER PROTEIN 22 (RSZ22);RS-CONTAINING ZINC FINGER PROTEIN 22 (At-RSZ22); (ATRSZ22)"]
["AT2G24360","grey","STYK serine threonine kinase that phosphorylates several oil body proteins including OLE1 and CLO4/CAL4.","SERINE/THREONINE/TYROSINE PROTEIN KINASE (STYK)","SERINE/THREONINE/TYROSINE PROTEIN KINASE (STYK); (RAF22)"]
["AT4G25520","grey","SEUSS-like 1;(source:Araport11)","SEUSS-LIKE 1 (SLK1)","SEUSS-LIKE 1 (SLK1)"]
["AT5G62090","grey","Encodes a protein that functions with LUH to promote Al binding to the root cell wall.","SEUSS-LIKE 2 (SLK2)","SEUSS-LIKE 2 (SLK2)"]
["AT4G25515","grey","SEUSS-like 3;(source:Araport11)","SEUSS-LIKE 3 (SLK3)","SEUSS-LIKE 3 (SLK3)"]
["AT5G26680","grey","Encodes a FEN1 homolog that has double-flap endonuclease activity, weak GEN activity towards bubble DNA structures and flap endonuclease activity towards substrates with a single-flap structure, but lacks the 5&#8242; exonuclease activity towards DNA substrates with a nick on one strand, and GEN activity towards gapped DNA without any flap. It is expressed in rapidly dividing cells and mutants have smaller roots and hypocotyls.","SHADE AVOIDANCE 6 (SAV6)","SHADE AVOIDANCE 6 (SAV6);FLAP ENDONUCLEASE I (FEN1)"]
["AT4G00720","grey","Encodes ASKtheta, a group III Arabidopsis GSK3/shaggy-like kinase. Functions in the brassinosteroid signalling pathway.","SHAGGY-LIKE PROTEIN KINASE 32 (SK32)","SHAGGY-LIKE PROTEIN KINASE 32 (SK32);SHAGGY-LIKE PROTEIN KINASE THETA (ASKTHETA);SHAGGY-LIKE PROTEIN KINASE 32 (ATSK32)"]
["AT1G18480","grey","Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11)","SHEWENELLA-LIKE PROTEIN PHOSPHATASE 2 (SLP2)","SHEWENELLA-LIKE PROTEIN PHOSPHATASE 2 (SLP2); (ATSLP2)"]
["AT1G69935","grey","Encodes a nuclear localized serine-arginine-aspartate-rich protein that acts as a negative regulator of photomorphogenesis.","SHORT HYPOCOTYL IN WHITE LIGHT1 (SHW1)","SHORT HYPOCOTYL IN WHITE LIGHT1 (SHW1)"]
["AT5G24735","grey","Has been identified as a translated small open reading frame by ribosome profiling.","SHORT OPEN READING FRAME 31 (SORF31)","SHORT OPEN READING FRAME 31 (SORF31)"]
["AT2G18330","grey","Homologue of animal ATPase Family AAA Domain-Containing Protein 3 (ATAD3), which is involved in mitochondrial nucleoid organization; interacts with SHOT1.","SHOT1 BINDING ATPASE 3 (SBA3)","SHOT1 BINDING ATPASE 3 (SBA3);ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 3B1 (ATAD3B1)"]
["AT1G08180","grey","cyclin-dependent kinase inhibitor;(source:Araport11)","SIAMESE-RELATED 2 (SMR2)","SIAMESE-RELATED 2 (SMR2)"]
["AT4G16940","grey","Redundant function together with SIKIC2 and 3 in SNC1-mediated autoimmunity. Protein levels controlled by MUSE1 and MUSE2.","SIDEKICK SNC1 1 (SIKIC1)","SIDEKICK SNC1 1 (SIKIC1)"]
["AT2G41180","grey","VQ motif-containing protein;(source:Araport11)","SIGMA FACTOR BINDING PROTEIN 2 (SIB2)","SIGMA FACTOR BINDING PROTEIN 2 (SIB2)"]
["AT1G05460","grey","Encodes a protein with similarity to RNA helicases. Mutants are defective in post-transcriptional gene silencing.","SILENCING DEFECTIVE (SDE3)","SILENCING DEFECTIVE (SDE3)"]
["AT5G37380","grey","J-domain protein, recruited by MBD5 and 6; acts as a transcriptional repressor. The conserved J-domain motif is required for its interaction with HSP70s and for its silencing function.","SILENZIO (SLN)","SILENZIO (SLN)"]
["AT5G62520","grey","Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation. Up-regulated by NaCl. SRO5 and P5CDH (an overlapping gene in the antisense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.","SIMILAR TO RCD ONE 5 (SRO5)","SIMILAR TO RCD ONE 5 (SRO5)"]
["AT2G45640","grey","Involved in the regulation of salt stress. Expression of AtSAP18 is induced by NaCl, cold, drought, ABA, and ethylene treatment. AtSAP18 and HDA19 associate with ERF3 and ERF4 both in vitro and in vivo.","SIN3 ASSOCIATED POLYPEPTIDE P18 (SAP18)","SIN3 ASSOCIATED POLYPEPTIDE P18 (SAP18);SIN3 ASSOCIATED POLYPEPTIDE 18 (ATSAP18)"]
["AT1G70060","grey","Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190). The mRNA is cell-to-cell mobile.","SIN3-LIKE 4 (SNL4)","SIN3-LIKE 4 (SNL4)"]
["AT1G59890","grey","SIN3-like 5;(source:Araport11)","SIN3-LIKE 5 (SNL5)","SIN3-LIKE 5 (SNL5)"]
["AT1G10230","grey","Involved in protein degradation. One target is PHR1.","SKP1-LIKE 18 (SK18)","SKP1-LIKE 18 (ASK18);SKP1-LIKE 18 (SK18)"]
["AT2G45950","grey","SKP1-like 20;(source:Araport11)","SKP1-LIKE 20 (SK20)","SKP1-LIKE 20 (SK20);SKP1-LIKE 20 (ASK20)"]
["AT4G24210","grey","F-box protein that is involved in GA signaling. Regulates seed germination. Component of E3 ubiquitin complex. Interacts with DELLA proteins.","SLEEPY1 (SLY1)","SLEEPY1 (SLY1);GAI AN REVERTANT 2 (GAR2); (GAR2)"]
["AT5G08490","grey","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","SLOW GROWTH 1 (SLG1)","SLOW GROWTH 1 (SLG1)"]
["AT2G13600","grey","Encodes a pentatricopeptide repeat protein belonging to the E+ subclass of the P-L-S subfamily. It is localized to the mitochondrion, affects several RNA editing sites, and is required for carbon energy balance in Arabidopsis by maintaining the abundance and/or activity of complexes I, III and IV of the mitochondrial electron transport chain.","SLOW GROWTH 2 (SLO2)","SLOW GROWTH 2 (SLO2)"]
["AT4G13520","grey","Encodes a small acid protein (SMAP1) that mediates responses Arabidopsis root to the synthetic auxin 2,4-Dichlorophenoxyacetic acid. The mRNA is cell-to-cell mobile.","SMALL ACIDIC PROTEIN 1 (SMAP1)","SMALL ACIDIC PROTEIN 1 (SMAP1)"]
["AT2G46690","grey","Regulates ABA-mediated responses to drought stress.","SMALL AUXIN UPREGULATED RNA 32 (SAUR32)","SMALL AUXIN UPREGULATED RNA 32 (SAUR32)"]
["AT1G72430","grey","SAUR-like auxin-responsive protein family;(source:Araport11)","SMALL AUXIN UPREGULATED RNA 78 (SAUR78)","SMALL AUXIN UPREGULATED RNA 78 (SAUR78)"]
["AT4G20440","grey","small nuclear ribonucleoprotein associated protein B;(source:Araport11)","SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B (smB)","SMALL NUCLEAR RIBONUCLEOPROTEIN ASSOCIATED PROTEIN B (smB); (SMBB)"]
["AT4G30220","grey","small nuclear ribonucleoprotein F;(source:Araport11)","SMALL NUCLEAR RIBONUCLEOPROTEIN F (RUXF)","SMALL NUCLEAR RIBONUCLEOPROTEIN F (RUXF); (SMFB)"]
["AT5G55160","grey","Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays.","SMALL UBIQUITIN-LIKE MODIFIER 2 (SUMO2)","SMALL UBIQUITIN-LIKE MODIFIER 2 (SUM2); (ATSUMO2);SMALL UBIQUITIN-LIKE MODIFIER 2 (SUMO2);SMALL UBIQUITIN-LIKE MODIFIER 2 (SUMO 2)"]
["AT4G30350","grey","Encodes a member of an eight-gene family (SMAX1 and SMAX1-like) that has weak similarity to AtHSP101, a ClpB chaperonin required for thermotolerance. Regulates root and root hair development downstream of KAI2-mediated signaling.","SMAX1-LIKE 2 (SMXL2)","SMAX1-LIKE 2 (SMXL2)"]
["AT3G52490","grey","Encodes a member of an eight-gene family (SMAX1 and SMAX1-like) that has weak similarity to AtHSP101, a ClpB chaperonin required for thermotolerance.","SMAX1-LIKE 3 (SMXL3)","SMAX1-LIKE 3 (SMXL3)"]
["AT1G03330","grey","Small nuclear ribonucleoprotein family protein;(source:Araport11)","SM-LIKE 2 (LSM2)","SM-LIKE 2 (LSM2)"]
["AT3G58030","grey","Encodes a RING domain E3 ligase. Has overlapping function with MUSE2 in the negative regulation of defence responses. SIKIC2 (and possibly SIKIC1 and 3) is ubiquination target.","SNC1- ENHANCING 1 (MUSE1)","SNC1- ENHANCING 1 (MUSE1)"]
["AT3G20010","grey","Encodes a member of the SNF2 family of helicase-like proteins and is involved in RNA-directed DNA methylation. It is functionally redundant with FRG2 and interacts physically with SUVR2, another component of the RdDM pathway.","SNF2-RING-HELICASE LIKE 1 (FRG1)","SNF2-RING-HELICASE LIKE 1 (FRG1);CHROMATIN REMODELING 27 (CHR27)"]
["AT5G60750","grey","Encodes a chloroplast endoproteinase, SNOWY COTYLEDON4 (SCO4), required for photosynthetic acclimation to higher light intensities.","SNOWY COTYLEDON 4 (SCO4)","SNOWY COTYLEDON 4 (SCO4)"]
["AT1G26470","grey","chromatin modification-like protein;(source:Araport11)","SNRK2-SUBSTRATE 1 (SNS1)","SNRK2-SUBSTRATE 1 (SNS1)"]
["AT1G54370","grey","Encodes an endosomal Na(+)/H(+) antiporter: AT1G54370 (NHX5), AT1G79610 (NHX6). Double knockout nhx5 nhx6 showed reduced growth, with smaller and fewer cells and increased sensitivity to salinity.","SODIUM HYDROGEN EXCHANGER 5 (NHX5)","SODIUM HYDROGEN EXCHANGER 5 (NHX5);NA+/H+ ANTIPORTER 5 (AtNHX5)"]
["AT3G53530","grey","Chloroplast-targeted copper chaperone protein;(source:Araport11)","SODIUM POTASSIUM ROOT DEFECTIVE 3 (NAKR3)","SODIUM POTASSIUM ROOT DEFECTIVE 3 (NAKR3);HEAVY METAL ASSOCIATED PROTEIN 30 (ATHMP30)"]
["AT3G19490","grey","member of Na+/H+ antiporter-Putative family","SODIUM:HYDROGEN ANTIPORTER 1 (NHD1)","SODIUM:HYDROGEN ANTIPORTER 1 (NHD1);ARABIDOPSIS THALIANA NA/H ANTIPORTER 1 (ATNHD1)"]
["AT1G17050","grey","Encodes one of the two paralogous solanesyl diphosphate synthases - SPS1 (At1g78510) and SPS2 (At1g17050) - that assemble the side-chain of plastoquinone-9 in plastids.","SOLANESYL DIPHOSPHATE SYNTHASE 2 (SPS2)","SOLANESYL DIPHOSPHATE SYNTHASE 2 (SPS2); (ATSPS2)"]
["AT2G26740","grey","Encodes a soluble epoxide hydrolase whose expression is induced by auxin and water stress.","SOLUBLE EPOXIDE HYDROLASE (SEH)","SOLUBLE EPOXIDE HYDROLASE (ATSEH);SOLUBLE EPOXIDE HYDROLASE (SEH)"]
["AT1G69640","grey","Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth.","SPHINGOID BASE HYDROXYLASE 1 (SBH1)","SPHINGOID BASE HYDROXYLASE 1 (SBH1)"]
["AT3G58490","grey","Encodes a long-chain base 1-phosphate (LCBP) phosphatase that is expressed in the endoplasmic reticulum.","SPHINGOID PHOSPHATE PHOSPHATASE 1 (SPP1)","SPHINGOID PHOSPHATE PHOSPHATASE 1 (SPP1); (AtSPP1);LIPID PHOSPHATE PHOSPHATASE DELTA (LPPDELTA)"]
["AT4G21540","grey","Encodes a sphingosine kinase, also has enzyme activity towards other plant long-chain sphingoid bases. Involved in guard cell ABA signalling and seed germination.","SPHINGOSINE KINASE 1 (SPHK1)","SPHINGOSINE KINASE 1 (SPHK1)"]
["AT2G28290","grey","Encodes a SWI2/SNF2-like protein in the SNF2 subclass.One of three classes of SWI/SNF ATPases in plants; it is the core enzyme of SYD-associated SWI/SNF (SAS) complexes (PMID:36471048). Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity.The mRNA is cell-to-cell mobile.","SPLAYED (SYD)","SPLAYED (SYD)"]
["AT5G63670","grey","Transcription elongation factor SPT4 homolog 2. T-DNA mutant is more susceptible to the biotroph Hpa.","SPT4 HOMOLOG 2 (SPT42)","SPT4 HOMOLOG 2 (SPT42); (SPT4-2)"]
["AT5G43270","grey","Member of the SPL (squamosa-promoter binding protein-like) gene family, a novel gene family encoding DNA binding proteins and putative transcription factors. In conjunction with SPL10 and SPL11, SPL2 redundantly controls proper development of lateral organs in association with shoot maturation in the reproductive phase. SPL2, SPL10, and SPL11, suppress root regeneration with age by inhibiting wound-induced auxin biosynthesis.","SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2 (SPL2)","SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 2 (SPL2)"]
["AT3G07020","grey","encodes a 3beta-hydroxy sterol UDP-glucosyltransferase. ugt80a2 mutant plants have reduced steryl glycoside and acyl steryl glycoside levels and reduced seed size. ugt80a2/b1 double mutants have normal levels of celluose and normal cold stress tolerance.","STEROL GLUCOSYLTRANSFERASE (SGT)","STEROL GLUCOSYLTRANSFERASE (SGT);UDP-GLUCOSYL TRANSFERASE 80A2 (UGT80A2)"]
["AT5G04940","grey","Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. SUVH1 has been shown to have a preference for binding methylated DNA.","SU(VAR)3-9 HOMOLOG 1 (SUVH1)","SU(VAR)3-9 HOMOLOG 1 (SUVH1)"]
["AT2G23740","grey","Encodes a SET-domain protein SUVR5 that mediates H3K9me2 deposition and silencing at stimulus response genes in a DNA methylation-independent manner.","SU(VAR)3-9-RELATED PROTEIN 5 (SUVR5)","SU(VAR)3-9-RELATED PROTEIN 5 (SUVR5)"]
["AT5G66760","grey","One of two genes in Arabidopsis that encode a flavoprotein subunit of the mitochondrial succinate dehydrogenase complex. The mRNA is cell-to-cell mobile.","SUCCINATE DEHYDROGENASE 1-1 (SDH1-1)","SUCCINATE DEHYDROGENASE 1-1 (SDH1-1)"]
["AT2G46390","grey","predicted to encode subunit 8 of mitochondrial complex II and to participate in the respiratory chain","SUCCINATE DEHYDROGENASE 8 (SDH8)","SUCCINATE DEHYDROGENASE 8 (SDH8)"]
["AT2G46505","grey","Encodes succinate dehydrogenase ,a component of mitochondrial respiratory complex II. Nuclear encoded gene which is imported into the mitochondrion.","SUCCINATE DEHYDROGENASE SUBUNIT 4 (SDH4)","SUCCINATE DEHYDROGENASE SUBUNIT 4 (SDH4)"]
["AT2G23030","grey","encodes a member of SNF1-related protein kinases (SnRK2)","SNF1-RELATED PROTEIN KINASE 2.9 (SNRK2.9)","SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-9 (SNRK2-9);SNF1-RELATED PROTEIN KINASE 2.9 (SNRK2.9)"]
["AT5G20280","grey","Encodes a sucrose-phosphate synthase activity. This is the major leaf isoform.","SUCROSE PHOSPHATE SYNTHASE 1F (SPS1F)","SUCROSE PHOSPHATE SYNTHASE 1F (ATSPS1F);SUCROSE-PHOSPHATE SYNTHASE A1 (SPSA1);SUCROSE PHOSPHATE SYNTHASE 1F (SPS1F)"]
["AT1G04920","grey","Encodes a sucrose-phosphate synthase whose activity is stimulated by Glc-6-P and inhibited by Pi.","SUCROSE PHOSPHATE SYNTHASE 3F (SPS3F)","SUCROSE PHOSPHATE SYNTHASE 3F (ATSPS3F);SUCROSE PHOSPHATE SYNTHASE 3F (SPS3F);SUCROSE PHOSPHATE SYNTHASE B (SPSB); (ATSPSB)"]
["AT3G19930","grey","Encodes a sucrose hydrogen symporter that is induced by wounding. The mRNA is cell-to-cell mobile.","SUGAR TRANSPORTER 4 (STP4)","SUGAR TRANSPORTER 4 (STP4);SUGAR TRANSPORTER 4 (ATSTP4)"]
["AT3G10370","grey","mitochondrial FAD-dependent glycerol-3-phosphate dehydrogenase. possibly involved in storage lipid catabolism and glycerol assimilation, and in glycerol-3-phosphate shuttle which transports reducing power from cytosol to mitochondrion.","SUGAR-DEPENDENT 6 (SDP6)","SUGAR-DEPENDENT 6 (SDP6)"]
["AT3G12520","grey","Encodes a sulfate transporter that in induced under sulfate limitation.","SULFATE TRANSPORTER 4;2 (SULTR4;2)","SULFATE TRANSPORTER 4;2 (SULTR4;2)"]
["AT1G04770","grey","SDI2 is a member of a small family of TPR proteins in Arabidopsis. Like SDI1 it is induced by low sulfer and appears to play a role in negative regulation of glucosinolate biosynthesis.","SULFUR DEFICIENCY INDUCED 2 (SDI2)","SULFUR DEFICIENCY INDUCED 2 (SDI2)"]
["AT5G66040","grey","Encodes a protein with thiosulfate sulfurtransferase/rhodanese activity in vitro, however, it is likely to use a substrate other than thiosulfate or 3-mercaptopyruvate in vivo. The mRNA is cell-to-cell mobile.","SULFURTRANSFERASE PROTEIN 16 (STR16)","SULFURTRANSFERASE PROTEIN 16 (STR16)"]
["AT5G48850","grey","Homologous to the wheat sulphate deficiency-induced gene sdi1. Expression in root and leaf is induced by sulfur starvation. Knockout mutants retained higher root and leaf sulfate concentrations, indicating a role in regulation of stored sulfate pools.","SULPHUR DEFICIENCY-INDUCED 1 (ATSDI1)","SULPHUR DEFICIENCY-INDUCED 1 (SDI1);SULPHUR DEFICIENCY-INDUCED 1 (ATSDI1)"]
["AT3G14205","grey","Phosphoinositide phosphatase family protein;(source:Araport11)","SUPPRESSOR OF ACTIN 2 (SAC2)","SUPPRESSOR OF ACTIN 2 (SAC2)"]
["AT1G17340","grey","Phosphoinositide phosphatase family protein;(source:Araport11)","SUPPRESSOR OF ACTIN 5 (SAC5)","SUPPRESSOR OF ACTIN 5 (SAC5)"]
["AT1G63900","grey","Encodes a RING-type ubiquitin E3 ligase of the chloroplast outer membrane that associates with TOC complexes and mediates ubiquitination of TOC components, promoting their degradation. It not only regulates chloroplast protein import but also targets components of the peroxisome protein import apparatus, PEX13 in particular. Several studies have been done to examine the peroxisomal localization of this protein, with varying interpretations.","DIAP1-LIKE PROTEIN 1 (DAL1)","SUPPRESSOR OF PPI1 LOCUS 1 (SP1);DIAP1-LIKE PROTEIN 1 (DAL1)"]
["AT5G63020","grey","Nucleotide binding leucine rich repeat protein of the C-NB-LRR (CNL) type. Involved in TOPP4 mediated immune response.","SUPPRESSORS OF TOPP4-1 (SUT1)","SUPPRESSORS OF TOPP4-1 (SUT1)"]
["AT2G01710","grey","SDJ2 functions partially redundantly with SDJ1 and SDJ3 and interacts with SUVH1 and SUVH3 to form a SUVH-SDJ complex. The complex binds promoters with DNA methylation and mediates transcriptional activation of promoter methylated genes.","SUVH1/3-INTERACTING DNAJ DOMAIN-CONTAINING PROTEIN 2 (SDJ2)","SUVH1/3-INTERACTING DNAJ DOMAIN-CONTAINING PROTEIN 2 (SDJ2); (DNAJ2)"]
["AT1G62970","grey","SDJ3 functions partially redundantly with SDJ1 and SDJ2 and interacts with SUVH1 and SUVH3 to form a SUVH-SDJ complex. The complex binds promoters with DNA methylation and mediates transcriptional activation of promoter methylated genes.","SUVH1/3-INTERACTING DNAJ DOMAIN-CONTAINING PROTEIN 3 (SDJ3)","SUVH1/3-INTERACTING DNAJ DOMAIN-CONTAINING PROTEIN 3 (SDJ3)"]
["AT1G03750","grey","switch 2;(source:Araport11)","SWITCH 2 (SWI2)","SWITCH 2 (SWI2);SUCROSE NON-FERMENTING 2 (SNF2);CHROMATIN REMODELING 9 (CHR9)"]
["AT5G07940","grey","Identified as a specific subunit of SYD-associated SWI/SNF (SAS) complexes (PMID:36471048).","SYD-ASSOCIATED SWI/SNF COMPLEX SUBUNIT 1 (SYS1)","SYD-ASSOCIATED SWI/SNF COMPLEX SUBUNIT 1 (SYS1)"]
["AT2G33120","grey","Encodes a member of Synaptobrevin-like protein family. Also known as VESICLE-ASSOCIATED MEMBRANE PROTEIN 722 (VAMP722). Required for cell plate formation. Post-transcriptionally regulated by CRT1/2 under ER stress.","SYNAPTOBREVIN-RELATED PROTEIN 1 (SAR1)","SYNAPTOBREVIN-RELATED PROTEIN 1 (SAR1); (VAMP722);ARABIDOPSIS THALIANA VESICLE-ASSOCIATED MEMBRANE PROTEIN 722 (ATVAMP722)"]
["AT5G08080","grey","member of SYP13 Gene Family, PM-associated; The root length of SYP132-overexpressing seedlings was shorter than that of the wild type. Auxin regulates SYP132 in root growth and the geotropic response. The expression of SYP132 is tightly regulated by auxin, and increased expression of SYP132 reduces the content of H+-ATPase protein on the plasma membrane and is involved in the endocytosis of plasma membrane H+-ATPase proteins, reducing their density and activity on the PM","SYNTAXIN OF PLANTS 132 (SYP132)","SYNTAXIN OF PLANTS 132 (SYP132)"]
["AT4G02195","grey","Encodes a member of SYP4 Gene Family that is a plant ortholog of the Tlg2/syntaxin16 Qa-SNARE. Together with SYP43, it regulates the secretory and vacuolar transport pathways in the post-Golgi network and maintains the morphology of the Golgi apparatus and TGN and is required for extracellular resistance responses to a fungal pathogen.","SYNTAXIN OF PLANTS 42 (SYP42)","SYNTAXIN OF PLANTS 42 (SYP42); (TLG2B); (ATTLG2B); (ATSYP42)"]
["AT3G09740","grey","syntaxin of plants 71 (SYP71), Qc-SNARE protein, member of KNOLLE complex; plays essential roles in plant development and stress response via regulating pH homeostasis.","SYNTAXIN OF PLANTS 71 (SYP71)","SYNTAXIN OF PLANTS 71 (SYP71); (ATSYP71)"]
["AT1G51740","grey","member of SYP8 Gene Family; together with SYP31 controls ER-Golgi trafficking in the plant secretory pathway.","SYNTAXIN OF PLANTS 81 (SYP81)","SYNTAXIN OF PLANTS 81 (SYP81);ARABIDOPSIS THALIANA ORTHOLOG OF YEAST UFE1 (UNKNOWN FUNCTION-ESSENTIAL 1) (ATUFE1); (ATSYP81);ORTHOLOG OF YEAST UFE1 (UNKNOWN FUNCTION-ESSENTIAL 1) (UFE1)"]
["AT3G55980","grey","CCCH-type zinc finger protein involved in salt stress and immune responses.","TANDEM ZINC FINGER 11 (TZF11)","TANDEM ZINC FINGER 11 (TZF11); (ATC3H47)"]
["AT1G19290","grey","Pentatricopeptide repeat protein involved in mitochondrial RNA processing.","TANG 2 (TANG2)","TANG 2 (TANG2)"]
["AT4G24972","grey","Encodes a novel small protein which is similar to proteins of unknown function from other plant species. TPD1 is involved in cell specification during anther and pollen development. Identified in a screen for male steriles. Mutants lack tapetal cells and have an increased number of microsporocytes. Expressed in flower buds, leaves and young seedlings. In anthers, TPD1 is expressed throughout pollen development in parietal cells and sporocytes. Physically interacts with the LRR kinase EMS1 and that interaction results in phosphorylation of TPD1.","TAPETUM DETERMINANT 1 (TPD1)","TAPETUM DETERMINANT 1 (TPD1)"]
["AT5G60200","grey","Encodes a Dof-type transcription factor. PEAR protein involved in the formation of a short-range concentration gradient that peaks at protophloem sieve elements, and activates gene expression that promotes radial growth. Locally promotes transcription of inhibitory HD-ZIP III genes, and thereby establishes a negative-feedback loop that forms a robust boundary that demarks the zone of cell division.","TARGET OF MONOPTEROS 6 (TMO6)","TARGET OF MONOPTEROS 6 (TMO6);DNA BINDING WITH ONE FINGER 5.3 (DOF5.3)"]
["AT3G13445","grey","TBP (TATA binding protein) associates with TAF(II)s (TBP-associated factors) to form the TFIID general transcription factor complex","TATA BINDING PROTEIN 1 (TBP1)","TATA BINDING PROTEIN 1 (TBP1);TRANSCRIPTION FACTOR IID-1 (TFIID-1)"]
["AT1G54140","grey","putative TATA binding protein associated factor 21kDa","TATA BINDING PROTEIN ASSOCIATED FACTOR 21KDA SUBUNIT (TAFII21)","TATA BINDING PROTEIN ASSOCIATED FACTOR 21KDA SUBUNIT (TAFII21);TBP-ASSOCIATED FACTOR 9 (TAF9)"]
["AT3G10070","grey","Encodes one of two Arabidopsis proteins with similarity to the TBP-associated factor TAF12.","TBP-ASSOCIATED FACTOR 12 (TAF12)","TATA-ASSOCIATED FACTOR II 58 (TAFII58);TBP-ASSOCIATED FACTOR 12 (TAF12)"]
["AT3G48190","grey","Encodes a homolog of the human ATM gene, which is mutated in ataxia telangiectasia, a chromosome instability disorder. Suppresses leaf senescence triggered by DNA double-strand break through epigenetic control of senescence-associated genes. Characterization of mutants suggest a role homologous recombination for DNA damage repair in response to ionizing radiation as well as during meiosis. The protein has kinase domains and shows kinase activity in orthologs. There is also evidence that ATM might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres.","TAXIA-TELANGIECTASIA MUTATED 1 (ATM-1)","TAXIA-TELANGIECTASIA MUTATED 1 (ATM-1)"]
["AT5G12130","grey","integral membrane TerC family protein;(source:Araport11)","PIGMENT DEFECTIVE 149 (pde149)","TELLURITE RESISTANCE C (ATTERC);PIGMENT DEFECTIVE 149 (pde149)"]
["AT5G58070","grey","Encodes a temperature-induced lipocalin that is involved in thermotolerance and is required for retinal-mediated de novo root organogenesis. Peripherally associated with plasma membrane.","TEMPERATURE-INDUCED LIPOCALIN (TIL)","TEMPERATURE-INDUCED LIPOCALIN (TIL);TEMPERATURE-INDUCED LIPOCALIN (ATTIL)"]
["AT2G19580","grey","Member of TETRASPANIN family","TETRASPANIN2 (TET2)","TETRASPANIN2 (TET2)"]
["AT3G43210","grey","Encodes a kinesin TETRASPORE. Required for cytokinesis in pollen. In mutants, all four microspore nuclei remain within the same cytoplasm after meiosis.","TETRASPORE (TES)","TETRASPORE (TES);ARABIDOPSIS NPK1-ACTIVATING KINESIN 2 (ATNACK2);NPK1-ACTIVATING KINESIN 2 (NACK2)"]
["AT4G08320","grey","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","TETRATRICOPEPTIDE REPEAT 8 (TPR8)","TETRATRICOPEPTIDE REPEAT 8 (TPR8)"]
["AT1G22070","grey","Encodes a transcription factor. Like other TGAla-related factors, TGA3 has a highly conserved bZIP region and exhibits similar DNA-binding properties.","TGA1A-RELATED GENE 3 (TGA3)","TGA1A-RELATED GENE 3 (TGA3)"]
["AT2G44750","grey","Encodes a thiamine pyrophosphokinase capable of producing thiamine pyrophosphate from free thiamine.","THIAMIN PYROPHOSPHOKINASE 2 (TPK2)","THIAMIN PYROPHOSPHOKINASE 2 (TPK2)"]
["AT5G10540","grey","Zincin-like metalloproteases family protein;(source:Araport11)","THIMET METALLOENDOPEPTIDASE 2 (TOP2)","THIMET METALLOENDOPEPTIDASE 2 (TOP2)"]
["AT5G26000","grey","member of Glycoside Hydrolase Family 1. encodes one of two known functional myrosinase enzymes in Arabidopsis. The enzyme catalyzes the hydrolysis of glucosinolates into compounds that are toxic to various microbes and herbivores.","THIOGLUCOSIDE GLUCOHYDROLASE 1 (TGG1)","THIOGLUCOSIDE GLUCOHYDROLASE 1 (TGG1); (AtTGG1);BETA GLUCOSIDASE 38 (BGLU38)"]
["AT1G45145","grey","encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells.","THIOREDOXIN H-TYPE 5 (TRX5)","THIOREDOXIN H-TYPE 5 (ATTRX5);THIOREDOXIN H-TYPE 5 (ATH5);THIOREDOXIN H-TYPE 5 (TRX-H5);THIOREDOXIN H-TYPE 5 (TRX5);LOCUS OF INSENSITIVITY TO VICTORIN 1 (LIV1)"]
["AT1G31020","grey","thioredoxin O2;(source:Araport11)","THIOREDOXIN O2 (TO2)","THIOREDOXIN O2 (ATO2);THIOREDOXIN O2 (TO2)"]
["AT1G53190","grey","Encodes a RING-type E3 ligase that positively regulates CIN-like TCP activity to promote leaf development by mediating the degradation of the TCP repressor TIE1.","TIE1-ASSOCIATED 33 RING-TYPE E3 LIGASE 1 (TEAR1)","TIE1-ASSOCIATED 33 RING-TYPE E3 LIGASE 1 (TEAR1); (CTL01)"]
["AT5G45050","grey","Encodes a member of the WRKY Transcription Factor (Group II-e) family.","(WRKY16)","TOLERANT TO TOBACCO RINGSPOT NEPOVIRUS 1 (TTR1); (WRKY16); (ATWRKY16)"]
["AT4G32760","grey","Encodes a member of the Arabidopsis TOL (TOM1-LIKE) family of ubiquitin binding proteins that acts redundantly in the recognition and further endocytic sorting of a PIN-FORMED (PIN)-type auxin carrier protein at the plasma membrane, modulating dynamic auxin distribution and associated growth responses.","TOM1-LIKE 9 (TOL9)","TOM1-LIKE 9 (TOL9)"]
["AT5G05570","grey","transducin family protein / WD-40 repeat family protein;(source:Araport11)","TOMOSYN (TMS)","TOMOSYN (TMS)"]
["AT5G03670","grey","histone-lysine N-methyltransferase SETD1B-like protein;(source:Araport11)","TON1 RECRUITING MOTIF 28 (TRM28)","TON1 RECRUITING MOTIF 28 (TRM28)"]
["AT3G16830","grey","TOPLESS family member which directly binds the N-terminal domain of SNC1 and interacts with TPR1.","TOPLESS-RELATED 2 (TPR2)","TOPLESS-RELATED 2 (TPR2)"]
["AT4G11990","grey","TPX2-LIKE Group A family with aurora binding andTPX2 domains. Activator of aurora kinase activity.","TPX2-LIKE PROTEIN 2 (TPXL2)","TPX2-LIKE PROTEIN 2 (TPXL2)"]
["AT4G37130","grey","Encodes a member of the Nup62 subcomplex of the Arabidopsis NPC.","TRANSCURVATA 1 (TCU1)","TRANSCURVATA 1 (TCU1); (NUP58)"]
["AT5G24710","grey","WD40/YVTN repeat protein which cooperates with the AP2 complex in the clathrin-mediated endocytosis of cellulose synthase to regulate cellulose biosynthesis.","TRANSDUCIN/WD40-2 PROTIEN (TWD40-2)","TRANSDUCIN/WD40-2 PROTIEN (TWD40-2)"]
["AT2G36070","grey","One of two genes in Arabidopsis that encode a putative subunit of the mitochondrial inner membrane translocase complex. TIM44 subunit is thought to provide the energy for translocation via hydrolysis of ATP.","TRANSLOCASE INNER MEMBRANE SUBUNIT 44-2 (TIM44-2)","TRANSLOCASE INNER MEMBRANE SUBUNIT 44-2 (ATTIM44-2);TRANSLOCASE INNER MEMBRANE SUBUNIT 44-2 (TIM44-2)"]
["AT5G50810","grey","Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus.","TRANSLOCASE INNER MEMBRANE SUBUNIT 8 (TIM8)","TRANSLOCASE INNER MEMBRANE SUBUNIT 8 (TIM8)"]
["AT5G43970","grey","Subunit of the TOM complex, a translocase in the outer mitochondrial membrane that selectively allows proteins with a mitochondrial targeting sequence to enter the mitochondrion.","TRANSLOCASE OF OUTER MEMBRANE 22-V (TOM22-V)","TRANSLOCASE OF OUTER MEMBRANE 22-V (TOM22-V);TRANSLOCASE OUTER MITOCHONDRIAL MEMBRANE 22-V (TOM9-2); (ATTOM22-V)"]
["AT1G27390","grey","Form of TOM20, which is a component of the TOM complex, involved in transport of nuclear-encoded mitochondrial proteins","TRANSLOCASE OUTER MEMBRANE 20-2 (TOM20-2)","TRANSLOCASE OUTER MEMBRANE 20-2 (TOM20-2)"]
["AT2G47840","grey","Encodes a component of the TIC (translocon at the inner envelope membrane of chloroplasts) protein translocation machinery mediating the protein translocation across the inner envelope of plastids. The Arabidopsis genome encodes four Tic20 homologous proteins, AT1G04940(Tic20-I), AT2G47840(Tic20-II), AT4G03320(Tic20-IV) and AT5G55710(Tic20-V).","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-II (Tic20-II)","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-II (Tic20-II);TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-II (AtTic20-II)"]
["AT5G05000","grey","Outer membrane GTPase protein that may function in import of nuclear encoded proteins into the chloroplast. Phosphorylation of the G-domains regulate translocon assembly.","TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 34 (TOC34)","TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 34 (TOC34); (OEP34);ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 34 (ATTOC34)"]
["AT5G20300","grey","Encodes Toc90, part of the TOC (translocon at the outer chloroplast membrane) machinery involved in the import of nucleus-encoded proteins into the chloroplast.","TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 90 (Toc90)","TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 90 (Toc90)"]
["AT3G13772","grey","Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. Overexpression of this protein in yeast alters copper and zinc homeostasis.","TRANSMEMBRANE NINE 7 (TMN7)","TRANSMEMBRANE NINE 7 (TMN7); (AtTMN7)"]
["AT4G24900","grey","Encodes a nuclear C2H2 domain-containing protein involved in embryo and endosperm development. Involved in brassinosteroid (BR)-mediated plant growth and catalyses the synthesis of S-allantoin, together with B1L participates in modulating plant growth and cold tolerance.","TITAN-LIKE (TTL)","TRANSTHYRETIN-LIKE PROTEIN (TTL);TITAN-LIKE (TTL)"]
["AT1G60140","grey","Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.","TREHALOSE PHOSPHATE SYNTHASE (TPS10)","TREHALOSE PHOSPHATE SYNTHASE 10 (TPS10);TREHALOSE PHOSPHATE SYNTHASE (ATTPS10);TREHALOSE PHOSPHATE SYNTHASE (TPS10)"]
["AT4G12430","grey","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)","TREHALOSE-6-PHOSPHATE PHOSPHATASE F (TPPF)","TREHALOSE-6-PHOSPHATE PHOSPHATASE F (TPPF)"]
["AT1G07540","grey","Arabidopsis thaliana telomere-binding protein, putative (At1g07540)","TRF-LIKE 2 (TRFL2)","TRF-LIKE 2 (TRFL2)"]
["AT1G15720","grey","Arabidopsis thaliana myb family transcription factor (At1g15720). MYB/SANT domain containing protein.","TRF-LIKE 5 (TRFL5)","TRF-LIKE 5 (TRFL5)"]
["AT3G06080","grey","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","TRICHOME BIREFRINGENCE-LIKE 10 (TBL10)","TRICHOME BIREFRINGENCE-LIKE 10 (TBL10)"]
["AT5G19160","grey","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","TRICHOME BIREFRINGENCE-LIKE 11 (TBL11)","TRICHOME BIREFRINGENCE-LIKE 11 (TBL11)"]
["AT5G64020","grey","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","TRICHOME BIREFRINGENCE-LIKE 14 (TBL14)","TRICHOME BIREFRINGENCE-LIKE 14 (TBL14)"]
["AT1G60790","grey","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","TRICHOME BIREFRINGENCE-LIKE 2 (TBL2)","TRICHOME BIREFRINGENCE-LIKE 2 (TBL2)"]
["AT3G11030","grey","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).The chemical evidence for function comes from xylan NMR analysis. Secondary wall thickening phenotype can be observed only in double or triple mutant combinations with esk1.","TRICHOME BIREFRINGENCE-LIKE 32 (TBL32)","TRICHOME BIREFRINGENCE-LIKE 32 (TBL32)"]
["AT1G27695","grey","TGD5 encodes a small glycine rich protein that is localized to the chloroplast envelope and is a component of the ER to plastid lipid trafficking pathway. TGD5 interacts with other components of this pathway including TGD1, TGD2, TGD3, and TGD4.","TRIGALACTOSYLDIACYLGLYCEROL 5 (TGD5)","TRIGALACTOSYLDIACYLGLYCEROL 5 (TGD5);GREEN LESS STOMATA 1 (GLES1)"]
["AT4G20850","grey","Tripeptidyl Peptidase II. Ser protease that assembles into a large oligomeric complex containing two proteins of 153 and 142 kD that are derived from a single TPP2 gene, with the smaller version missing part of the C-terminal end. Not essential, based on the lack of phenotype of a T-DNA disruption mutant.","TRIPEPTIDYL PEPTIDASE II (TPP2)","TRIPEPTIDYL PEPTIDASE II (TPP2)"]
["AT1G78190","grey","Trm112p-like protein;(source:Araport11)","TRNA METHYLTRANSFERASE 112A (TRM112A)","TRNA METHYLTRANSFERASE 112A (TRM112A); (ATTRM112A); (SMO2)"]
["AT4G01880","grey","methyltransferase;(source:Araport11)","TRNA METHYLTRANSFERASE 13 (TRM13)","TRNA METHYLTRANSFERASE 13 (TRM13); (ATTRM13)"]
["AT5G19200","grey","Encodes one of the Arabidopsis proteins (At3g06060/TSC10A and At5g19200/TSC10B) with significant similarity to the yeast 3-ketodihydrosphinganine (3-KDS) reductase, Tsc10p. Both TSC10A and TSC10B are bona fide 3-KDS reductase as shown by complementation experiment in yeast.","TSC10B (TSC10B)","TSC10B (TSC10B)"]
["AT2G47900","grey","Member of plant TLP family which differs in having an F box domain. Plasma membrane tethering is mediated by PIP2 binding domain. Under abiotic stress TLP3 detaches from the PM and translocates to the nucleus. Mutants are insensitive to ABA.","TUBBY LIKE PROTEIN 3 (TLP3)","TUBBY LIKE PROTEIN 3 (TLP3)"]
["AT1G53320","grey","Member of plant TLP family. TLP7 is tethered to the PM but detaches upon stimulus and translocates to the nucleus. Has DNA binding activity but lacks conservation of the transcription activation domain.","TUBBY LIKE PROTEIN 7 (TLP7)","TUBBY LIKE PROTEIN 7 (AtTLP7);TUBBY LIKE PROTEIN 7 (TLP7)"]
["AT2G29550","grey","Encodes a beta-tubulin that is expressed in leaves, roots and flowers.","TUBULIN BETA-7 CHAIN (TUB7)","TUBULIN BETA-7 CHAIN (TUB7);TUBULIN BETA 7 (TBB7)"]
["AT1G78240","grey","Encodes TSD2 (TUMOROUS SHOOT DEVELOPMENT2), a putative methyltransferase with an essential role in cell adhesion, anthocyanin accumulation, and coordinated plant development.","TUMOROUS SHOOT DEVELOPMENT 2 (TSD2)","TUMOROUS SHOOT DEVELOPMENT 2 (TSD2);QUASIMODO2 (QUA2); (OSU1);THINGS FALL APART2 (TFA2)"]
["AT4G03560","grey","Encodes a depolarization-activated Ca(2+) channel. Anti-sense experiments with this gene as well as Sucrose-H(+) symporters and complementation of yeast sucrose uptake mutant cch1 suggest that this protein mediates a voltage-activated Ca(2+ )influx. Mutants lack detectable SV channel activity suggesting TPC1 is essential component of the SV channel. Patch clamp analysis of loss of function mutation indicates TPC1 does not affect Ca2+ signaling in response to abiotic and biotic stress.","TWO-PORE CHANNEL 1 (TPC1)","TWO-PORE CHANNEL 1 (ATTPC1); (TPC1);CALCIUM CHANNEL 1 (ATCCH1);FATTY ACID OXYGENATION UPREGULATED 2 (FOU2);TWO-PORE CHANNEL 1 (TPC1)"]
["AT2G39840","grey","Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers. The mRNA is cell-to-cell mobile.","TYPE ONE SERINE/THREONINE PROTEIN PHOSPHATASE 4 (TOPP4)","TYPE ONE SERINE/THREONINE PROTEIN PHOSPHATASE 4 (TOPP4)"]
["AT3G50670","grey","Encodes U1 snRNP 70K","U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K (U1-70K)","U1 SMALL NUCLEAR RIBONUCLEOPROTEIN-70K (U1-70K); (U1SNRNP)"]
["AT1G09230","grey","Encodes a U12-type spliceosomal protein that is an indispensible component of the minor spliceosome and plays a crucial role in U12 intron splicing and plant development.","U11/U12-65K (U11/U12-65K)","U11/U12-65K (U11/U12-65K)"]
["AT5G53902","grey","U3 small nucleolar RNA","U3 SMALL NUCLEOLAR RNAB (U3B)","U3 SMALL NUCLEOLAR RNAB (U3B)"]
["AT5G54075","grey","U3 small nucleolar RNA","U3 SMALL NUCLEOLAR RNAD (U3D)","U3 SMALL NUCLEOLAR RNAD (U3D)"]
["AT4G10970","grey","UAP56-interacting factor1, binds single stranded RNA and, along with UIEF2,,appears to play a role in nuclear export of RNA.","UAP56-INTERACTING EXPORT FACTOR 1 (UIEF1)","UAP56-INTERACTING EXPORT FACTOR 1 (UIEF1)"]
["AT4G05050","grey","polyubiquitin gene, belongs to a subtype group with UBQ10 and UBQ14. Various ecotypes of Arabidopsis have different numbers of ubiquitin repeats within this gene.","UBIQUITIN 11 (UBQ11)","UBIQUITIN 11 (UBQ11)"]
["AT1G14400","grey","ubiquitin carrier protein","UBIQUITIN CARRIER PROTEIN 1 (UBC1)","UBIQUITIN CARRIER PROTEIN 1 (UBC1); (ATUBC1);UBIQUITIN CONJUGATING ENZYME 1 (UBC1)"]
["AT1G78870","grey","UBC35/UBC13A encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UBC35/UBC13A can form diubiquitin and triubiquitin chains in combination with MMZ1,2,3,4/(UEV1A,B,C,D) in vitro. It can also functionally complement an mms2 ubc13 mutation in budding yeast by increasing the double mutant's viability in the presence of the DNA damaging agent MMS, when it is co-expressed with MMZ / UEV1 genes. A wild type phenotype is restored with MMZ3/UEV1C and MMZ4/UEV1D, but only partial complementation is achieved with MMZ1/UEV1A or MMZ2/UEV1B. The mRNA is cell-to-cell mobile.","UBIQUITIN-CONJUGATING ENZYME 35 (UBC35)","UBIQUITIN CONJUGATING ENZYME 13A (UBC13A);UBIQUITIN-CONJUGATING ENZYME 35 (UBC35)"]
["AT3G06330","grey","Together with ULS2 regulates leaf senescence and stomatal closure via repression of ABA transporter gene ABCG40.","UBIQUITIN LIGASE OF SENESCENCE 1 (ULS1)","UBIQUITIN LIGASE OF SENESCENCE 1 (ULS1)"]
["AT2G02760","grey","ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene.","UBIQUITING-CONJUGATING ENZYME 2 (UBC2)","UBIQUITING-CONJUGATING ENZYME 2 (ATUBC2);UBIQUITIN-CONJUGATING ENZYME 2 (UBC2);UBIQUITING-CONJUGATING ENZYME 2 (UBC2)"]
["AT2G45695","grey","Ubiquitin related modifier 1;(source:Araport11)","UBIQUITIN-RELATED MODIFIER 11 (URM11)","UBIQUITIN-RELATED MODIFIER 11 (URM11)"]
["AT4G10590","grey","encodes a member of the ubiquitin-specific protease family, UBP10","UBIQUITIN-SPECIFIC PROTEASE 10 (UBP10)","UBIQUITIN-SPECIFIC PROTEASE 10 (UBP10)"]
["AT1G17110","grey","Encodes a ubiquitin-specific protease, and its activity has been confirmed in an in vitro assay. ubp15 mutants have defects in cell proliferation, and the associated processes of leaf, root, stem, flower, and silique development. UBP15 can be found in the nucleus and cytoplasm in transient assays. Though UBP15 is expressed in many tissues, UBP15 transcript levels are higher in rosette leaves and inflorescences than in other parts of the plant. Together with CUC2/CUC3-DA1 part of a regulatory module controls the initiation of axillary meristems, thereby determining plant architecture. As a direct substrate of DA1 peptidase, it represses the initiation of axillary meristems.","UBIQUITIN-SPECIFIC PROTEASE 15 (UBP15)","UBIQUITIN-SPECIFIC PROTEASE 15 (UBP15)"]
["AT4G17895","grey","Encodes a ubiquitin-specific protease.","UBIQUITIN-SPECIFIC PROTEASE 20 (UBP20)","UBIQUITIN-SPECIFIC PROTEASE 20 (UBP20)"]
["AT5G46740","grey","Encodes a ubiquitin-specific protease.","UBIQUITIN-SPECIFIC PROTEASE 21 (UBP21)","UBIQUITIN-SPECIFIC PROTEASE 21 (UBP21)"]
["AT5G10790","grey","Encodes a ubiquitin-specific protease.","UBIQUITIN-SPECIFIC PROTEASE 22 (UBP22)","UBIQUITIN-SPECIFIC PROTEASE 22 (UBP22)"]
["AT3G49600","grey","Encodes a ubiquitin-specific protease which catalyzes deubiquitination of histone H2B and is required for heterochromatin silencing.Loss of function mutations display autonomous endosperm development and embryo arrest. Loss of function also results in an increase in expression of the PcG complex target gene PHE1.","UBIQUITIN-SPECIFIC PROTEASE 26 (UBP26)","UBIQUITIN-SPECIFIC PROTEASE 26 (UBP26); (SUP32); (ATUBP26)"]
["AT2G22310","grey","Encodes a ubiquitin-specific protease.","UBIQUITIN-SPECIFIC PROTEASE 4 (UBP4)","UBIQUITIN-SPECIFIC PROTEASE 4 (ATUBP4);UBIQUITIN-SPECIFIC PROTEASE 4 (UBP4)"]
["AT4G10570","grey","encodes a ubiquitin-specific protease family member, UBP9.","UBIQUITIN-SPECIFIC PROTEASE 9 (UBP9)","UBIQUITIN-SPECIFIC PROTEASE 9 (UBP9)"]
["AT3G06910","grey","Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. In vitro assays suggest that this enzyme is active against SUMO1 and SUMO2. It has weak activity with SUMO3 and cannot act on SUMO5. The N-terminal regulatory region of this protein is required for full activity. Suppresses growth during salt stress.","UB-LIKE PROTEASE 1A (ULP1A)","UB-LIKE PROTEASE 1A (ULP1A);ESD4-LIKE SUMO PROTEASE 1 (ELS1); (AtULP1a)"]
["AT4G00690","grey","UB-like protease 1B;(source:Araport11)","UB-LIKE PROTEASE 1B (ULP1B)","UB-LIKE PROTEASE 1B (ULP1B)"]
["AT3G56860","grey","Encodes one of three UBA2 genes in Arabidopsis. It is a nuclear protein that binds to RNA with a specificity for oligouridylates in vitro. Along with UBP1 and UBA1a, it may act as a component of a complex recognizing U-rich sequences in plant 3'-UTRs and contributing to the stabilization of mRNAs in the nucleus.","UBP1-ASSOCIATED PROTEIN 2A (UBA2A)","UBP1-ASSOCIATED PROTEIN 2A (UBA2A)"]
["AT3G15010","grey","Encodes one of three UBA2 genes in Arabidopsis. It represses flowering by promoting the transcription of the flowering repressor gene FLM, thereby preventing early flowering and hypocotyl and petiole elongation.","UBP1-ASSOCIATED PROTEIN 2C (UBA2C)","UBP1-ASSOCIATED PROTEIN 2C (UBA2C)"]
["AT5G11230","grey","Nucleotide-sugar transporter family protein;(source:Araport11)","UDPARABINOFURANOSE TRANSPORTER 2 (UAFT2)","UDPARABINOFURANOSE TRANSPORTER 2 (UAFT2)"]
["AT3G59360","grey","UDP-galactose transporter 6;(source:Araport11)","UDP-GALACTOSE TRANSPORTER 6 (UTR6)","UDP-GALACTOSE TRANSPORTER 6 (ATUTR6);UDP-GALACTOSE TRANSPORTER 6 (UTR6)"]
["AT3G29360","grey","Encodes one of four UDP-glucose dehydrogenase UGD) genes. Mutation of this gene in combination with UGD3 leads to swollen plant cell walls and severe developmental defects associated with changes in pectic polysaccharides.","UDP-GLUCOSE DEHYDROGENASE 2 (UGD2)","UDP-GLUCOSE DEHYDROGENASE 2 (UGD2)"]
["AT3G21800","grey","UDP-glucosyl transferase 71B8;(source:Araport11)","UDP-GLUCOSYL TRANSFERASE 71B8 (UGT71B8)","UDP-GLUCOSYL TRANSFERASE 71B8 (UGT71B8)"]
["AT1G07260","grey","Encodes a uridine diphosphate-glycosyltransferase that acts on methyl salicylate (MeSA) to form MeSA glucosides in vitro and in vivo and facilitates negative regulation of the SAR response by modulating homeostasis of MeSA and SA.","UDP-GLUCOSYL TRANSFERASE 71C3 (UGT71C3)","UDP-GLUCOSYL TRANSFERASE 71C3 (UGT71C3)"]
["AT1G07240","grey","Encodes a UDP-glucosyltransferase that plays a role in abscisic acid (ABA) glucosylation from ABA to ABA-glucose ester and regulates ABA homeostasis, thereby influencing the ABA signal network.","UDP-GLUCOSYL TRANSFERASE 71C5 (UGT71C5)","UDP-GLUCOSYL TRANSFERASE 71C5 (UGT71C5)"]
["AT5G17050","grey","The At5g17050 encodes a anthocyanidin 3-O-glucosyltransferase which specifically glucosylates the 3-position of the flavonoid C-ring. Anthocyanidins such as cyanidin and pelargonidin as well as flavonols such as kaempferol and quercetin are accepted substrates. Role in the glycosylation of coumarins for iron (Fe) acquisition under low-Fe conditions.","UDP-GLUCOSYL TRANSFERASE 78D2 (UGT78D2)","UDP-GLUCOSYL TRANSFERASE 78D2 (UGT78D2)"]
["AT2G31670","grey","Stress responsive alpha-beta barrel domain protein;(source:Araport11)","UP3 (UP3)","UP3 (UP3)"]
["AT4G08290","grey","nodulin MtN21-like transporter family protein","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 20 (UMAMIT20)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 20 (UMAMIT20)"]
["AT5G46860","grey","Syntaxin-related protein required for vacuolar assembly. A member of t-SNARE superfamily, homologous to yest Vam3p. Localized in the vacuolar membranes. The protein has a heptad repeat structure (residues164?220) in which hydrophobic amino acid residues appear at seven amino acid intervals. Such regions have a high potential to form an amphiphilic a-helix, intriguing for the intermolecular interactions by forming coiled-coil structure. AtVam3p has a highly hydrophobic segment at its C terminus thus implicating it to be a membrane protein while the rest of the sequence is hydrophilic.","VACUOLAR MORPHOLOGY 3 (VAM3)","VACUOLAR MORPHOLOGY 3 (VAM3);SHOOT GRAVITROPISM 3 (SGR3);SYNTAXIN OF PLANTS 22 (SYP22);ARABIDOPSIS THALIANA SYNTAXIN OF PLANTS 22 (ATSYP22);ARABIDOPSIS THALIANA VACUOLAR MORPHOLOGY 3 (ATVAM3)"]
["AT1G08190","grey","Might be involved in protein sorting to the vacuole. The mRNA is cell-to-cell mobile.","VACUOLAR PROTEIN SORTING 41 (VPS41)","VACUOLAR PROTEIN SORTING 41 (ATVPS41);ZIGZAG SUPPRESSOR 2 (ZIP2); (VAM2); (ATVAM2);VACUOLAR PROTEIN SORTING 41 (VPS41)"]
["AT2G14720","grey","encodes a vacuolar sorting receptor","VACUOLAR SORTING RECEPTOR 4 (VSR4)","VACUOLAR SORTING RECEPTOR 2 (VSR-2);VACUOLAR SORTING RECEPTOR 4 (VSR4);VACUOLAR SORTING RECEPTOR 2;1 (VSR2;1);BINDING PROTEIN OF 80 KDA 2;1 (BP80-2;1); (MTV4);MODIFIED TRANSPORT TO THE VACUOLE 2 (MTV2)"]
["AT3G60600","grey","Encodes VAP27 (for Vesicle-Associated Protein). VAP27 has high homology to the VAP33 family of SNARE-like proteins from animals. May be involved in vesicular transport to or from the ER. Located exclusively in limiting membrane of protein storage vacuoles. Binds SRC2.","VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 (VAP27-1)","VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1 (VAP27-1);VESICLE ASSOCIATED PROTEIN (VAP); ((AT)VAP); (VAP27); (PVA11.2)"]
["AT1G08820","grey","Encodes VAP33-like protein that interacts with cowpea mosaic virus protein 60K. Is a SNARE-like protein that may be involved in vesicular transport to or from the ER.","VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-2 (VAP27-2)","VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-2 (VAP27-2)"]
["AT1G10870","grey","A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD4 belongs to the Class 1, together with AGD1, AGD2, and AGD3.","VAN3-LIKE PROTEIN3 (VAL3)","VAN3-LIKE PROTEIN3 (VAL3)"]
["AT5G17790","grey","Encodes a zinc-finger motif containing protein that is essential for chloroplast RNA editing. The protein physically interacts with ORRM1 and other components of chloroplast editosomes. VAR3 is a part of a protein complex required for normal chloroplast and palisade cell development. Mutants display a variegated phenotype due to somatic areas lacking or containing developmentally retarded chloroplasts and greatly reduced numbers of palisade cells.","VARIEGATED 3 (VAR3)","VARIEGATED 3 (VAR3); (ATOZ1);ORGANELLE ZINC FINGER 1 (OZ1)"]
["AT3G05270","grey","Encodes a protein that localizes at motile vesicle-like small compartments in differentiating xylem cells that is associated with microtubule plus-ends. VETH-positive compartments are unlikely to be elements in conventional endomembrane trafficking pathways. It can associate with COG2, and together these two proteins co-localize with the EXO70A1 exocyst subunit, tethering EXO70A1 to compartments associated with cortical microtubules.","VESICLE TETHERING 1 (VETH1)","VESICLE TETHERING 1 (VETH1)"]
["AT2G33110","grey","member of VAMP72 Gene Family, one of 6 ER-localized SNARE proteins.","VESICLE-ASSOCIATED MEMBRANE PROTEIN 723 (VAMP723)","VESICLE-ASSOCIATED MEMBRANE PROTEIN 723 (ATVAMP723); (VAMP723);VESICLE-ASSOCIATED MEMBRANE PROTEIN 723 (VAMP723)"]
["AT3G57410","grey","Encodes a protein with high homology to animal villin. VLN3 is a Ca2+-regulated villin involved in actin filament bundling.","VILLIN 3 (VLN3)","VILLIN 3 (VLN3); (ATVLN3)"]
["AT4G30160","grey","Encodes a major actin filament bundling protein that is involved in root hair growth through regulating actin organization in a Ca2+-dependent manner.","VILLIN 4 (VLN4)","VILLIN 4 (VLN4)"]
["AT5G55120","grey","Encodes a GDP-L-galactose phosphorylase, with similar biochemical properties as VTC2.","VITAMIN C DEFECTIVE 5 (VTC5)","VITAMIN C DEFECTIVE 5 (VTC5)"]
["AT5G67500","grey","Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. The mRNA is cell-to-cell mobile.","VOLTAGE DEPENDENT ANION CHANNEL 2 (VDAC2)","VOLTAGE DEPENDENT ANION CHANNEL 2 (VDAC2);ARABIDOPSIS THALIANA VOLTAGE DEPENDENT ANION CHANNEL 2 (ATVDAC2)"]
["AT5G15090","grey","Encodes a voltage-dependent anion channel (VDAC: AT3G01280/VDAC1, AT5G67500/VDAC2, AT5G15090/VDAC3, AT5G57490/VDAC4, AT5G15090/VDAC5). VDACs are reported to be porin-type, beta-barrel diffusion pores. They are prominently localized in the outer mitochondrial membrane and are involved in metabolite exchange between the organelle and the cytosol. Purified VDAC3 is shown to have voltage-dependent anion channel activity.","VOLTAGE DEPENDENT ANION CHANNEL 3 (VDAC3)","VOLTAGE DEPENDENT ANION CHANNEL 3 (VDAC3); (ATVDAC-3);ARABIDOPSIS THALIANA VOLTAGE DEPENDENT ANION CHANNEL 3 (ATVDAC3)"]
["AT2G39120","grey","Encodes a mitochondrial protein essential for the splicing of group II introns in two mitochondrial genes for which splicing factors had not previously been identified: rpl2 and ccmFc.","WHAT IS THIS FACTOR 9 (WTF9)","WHAT IS THIS FACTOR 9 (WTF9)"]
["AT3G51630","grey","Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases.","WITH NO LYSINE (K) KINASE 5 (WNK5)","WITH NO LYSINE (K) KINASE 5 (WNK5); (ZIK1); (ATWNK5)"]
["AT5G50200","grey","Wound-responsive gene 3 (WR3). Encodes a high-affinity nitrate transporter. Up-regulated by nitrate. Involved in jasmonic acid-independent wound signal transduction.","WOUND-RESPONSIVE 3 (WR3)","WOUND-RESPONSIVE 3 (WR3);NITRATE TRANSPORTER 3.1 (NRT3.1); (ATNRT3.1)"]
["AT4G26455","grey","Encodes an outer nuclear membrane protein that anchors RanGAP1 to the nuclear envelope. It interacts with SUN proteins and is required for maintaining the elongated nuclear shape of epidermal cells.","WPP DOMAIN INTERACTING PROTEIN 1 (WIP1)","WPP DOMAIN INTERACTING PROTEIN 1 (WIP1);ARABIDOPSIS THALIANA WPP DOMAIN INTERACTING PROTEIN 1 (ATWIP1)"]
["AT2G47260","grey","Encodes a member of WRKY Transcription Factor; Group I. Involved in nematode feeding site establishment and auxin mediated PIN polar localization in roots. Expression is induced by auxin.","WRKY DNA-BINDING PROTEIN 23 (WRKY23)","WRKY DNA-BINDING PROTEIN 23 (ATWRKY23);WRKY DNA-BINDING PROTEIN 23 (WRKY23)"]
["AT2G30250","grey","member of WRKY Transcription Factor; Group I. Located in nucleus. Involved in response to various abiotic stresses - especially salt stress.","WRKY DNA-BINDING PROTEIN 25 (WRKY25)","WRKY DNA-BINDING PROTEIN 25 (WRKY25); (AtWRKY25)"]
["AT3G58710","grey","member of WRKY Transcription Factor; Group II-e. Involved in thermomorphogenesis.","WRKY DNA-BINDING PROTEIN 69 (WRKY69)","WRKY DNA-BINDING PROTEIN 69 (WRKY69);RABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 69 (ATWRKY69); (ABT4)"]
["AT3G48580","grey","Encodes a cell-wall localized xyloglucan endotransglucosylase/hydrolase.","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 11 (XTH11)","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 11 (XTH11)"]
["AT5G62220","grey","Encodes a Golgi apparatus-localized galactosyltransferase involved in galactosyl-substitution of xyloglucan at position 2.","GLYCOSYLTRANSFERASE 18 (GT18)","XYLOGLUCAN L-SIDE CHAIN GALACTOSYLTRANSFERASE POSITION 2 (XLT2);GLYCOSYLTRANSFERASE 18 (ATGT18);GLYCOSYLTRANSFERASE 18 (GT18)"]
["AT1G74380","grey","Golgi localized xyloglucan alpha-1,6-xylosyltransferase.","XYLOGLUCAN XYLOSYLTRANSFERASE 5 (XXT5)","XYLOGLUCAN XYLOSYLTRANSFERASE 5 (XXT5)"]
["AT4G00180","grey","YABBY gene family member, likely has transcription factor activity, involved in specifying abaxial cell fate. Along with FIL, involved in patterning of the fruit. GUS reporter gene expression in seedlings is observed in the young leaves and as the leaf matures, expression is restricted to the abaxial tissues of leaves, expression is also observed on either side of the leaf margin in the younger tissues of leaf blades.","YABBY3 (YAB3)","YABBY3 (YAB3)"]
["AT5G35980","grey","Encodes a dual specificity protein kinase which phosphorylates substract proteins on Ser/Thr and Tyr residues. Some substrates include annexin family proteins. YAK1 mutations suppress TOR deficiency in Arabidopsis and consequences of lst8 mutations. The YAK1 protein is phosphorylated by the TOR kinase.","YEAST YAK1-RELATED GENE 1 (YAK1)","YEAST YAK1-RELATED GENE 1 (YAK1)"]
["AT3G22690","grey","YS1 is a PPR protein involved in RNA editing of plastid encoded genes. Natural variation in this locus is associated with increased photosynthetic acclimation.","YELLOW SEEDLING1 (YS1)","YELLOW SEEDLING1 (YS1)"]
["AT5G11520","grey","Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves.","ASPARTATE AMINOTRANSFERASE 3 (ASP3)","YELLOW-LEAF-SPECIFIC GENE 4 (YLS4);ASPARTATE AMINOTRANSFERASE 3 (ASP3)"]
["AT5G44740","grey","Y-family DNA polymerase. Catalyses translesion synthesis in response to UV damage. Functionally interacts with PCNA2. Has a ubiquitin binding motif.","Y-FAMILY DNA POLYMERASE H (POLH)","Y-FAMILY DNA POLYMERASE H (POLH)"]
["AT2G18840","grey","Encodes one of the two YPT/RAB GTPase Interacting Protein 4a (YIP4a) and YIP4b (formerly YIP2), which form a TGN-localized complex with ECHIDNA (ECH). This complex is required for the secretion of cell wall polysaccharides.","YPT/RAB GTPASE INTERACTING PROTEIN 4A (YIP4A)","YPT/RAB GTPASE INTERACTING PROTEIN 4A (YIP4A)"]
["AT4G17085","grey","Plant-specific small peptide which interacts with ROCK1 to regulate organ size.","ZENGDA SMALL PEPTIDE 1 (ZSP1)","ZENGDA SMALL PEPTIDE 1 (ZSP1)"]
["AT3G04870","grey","Involved in the biosynthesis of carotenes and xanthophylls, reduces zeta-carotene to lycopene.","ZETA-CAROTENE DESATURASE (ZDS)","ZETA-CAROTENE DESATURASE (ZDS);PIGMENT DEFECTIVE EMBRYO 181 (PDE181);SPONTANEOUS CELL DEATH 1 (SPC1)"]
["AT5G65930","grey","encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches.","ZWICHEL (ZWI)","ZWICHEL (ZWI)"]
["AT5G13260","lightcyan","myosin;(source:Araport11)"]
["AT1G26180","lightcyan","membrane protein;(source:Araport11)"]
["AT5G22780","lightcyan","Adaptor protein complex AP-2, alpha subunit;(source:Araport11)"]
["AT5G14240","lightcyan","Thioredoxin superfamily protein;(source:Araport11)"]
["AT2G15240","lightcyan","UNC-50 family protein;(source:Araport11)"]
["AT1G03590","lightcyan","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT1G21590","lightcyan","kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)"]
["AT3G48380","lightcyan","Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2;(source:Araport11)"]
["AT5G42460","lightcyan","F-box and associated interaction domains-containing protein;(source:Araport11)"]
["AT5G07960","lightcyan","asterix-like protein;(source:Araport11)"]
["AT5G51150","lightcyan","Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein;(source:Araport11)"]
["AT4G30310","lightcyan","FGGY family of carbohydrate kinase;(source:Araport11)"]
["AT4G32640","lightcyan","Sec23/Sec24 protein transport family protein;(source:Araport11)"]
["AT5G11280","lightcyan","tail fiber;(source:Araport11)"]
["AT3G55020","lightcyan","Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11)"]
["AT3G04860","lightcyan","hypothetical protein (DUF868);(source:Araport11)"]
["AT3G04470","lightcyan","Ankyrin repeat family protein;(source:Araport11)"]
["AT1G78920","lightcyan","Encodes a type II H+-PPases that localizes to and function as a proton pump of the Golgi apparatus in most tissues except for mature leaves.","VACUOLAR H+-PYROPHOSPHATASE 2 (VP2)","(AtVHP2;1); (VHP2;1);VACUOLAR H+-PYROPHOSPHATASE 2 (VP2);VACUOLAR H+-PYROPHOSPHATASE 2 (AVP2);VACUOLAR-PYROPHOSPHATASE LIKE PROTEIN 1 (AVPL1)"]
["AT4G21430","lightcyan","protein B160;(source:Araport11)","(JMJ28)","(B160); (JMJ28)"]
["AT3G09650","lightcyan","RNA binding protein involved in the processing of chloroplast psbB-psbT-psbH-petB-petD transcript unit.","HIGH CHLOROPHYLL FLUORESCENCE 152 (HCF152)","(CRM3);HIGH CHLOROPHYLL FLUORESCENCE 152 (HCF152)"]
["AT2G25430","lightcyan","AP180 N-terminal homology domain, TPLATE complex protein involved in clathrin-mediated endocytosis.","(PICALM4A)","(PICALM4A);EPSIN-LIKE CLATHRIN ADAPTOR (ATECA4)"]
["AT3G24315","lightcyan","SNARE protein located in Golgi apparatus.","(AtSec20)","(SEC20); (AtSec20)"]
["AT5G65950","lightcyan","TRAPPIII complex protein which regulates TGN integrity, by altered TGN/EE association of several residents, including SYNTAXIN OF PLANTS 61 (SYP61), and altered vesicle morphology. Involved in regulation of endosomal function and salt stress response.","RESPONSE TO OLIGOGALACTURONIDE-2 (ROG2)","(TRAPPC11);RESPONSE TO OLIGOGALACTURONIDE-2 (ROG2)"]
["AT1G12910","lightcyan","Encodes LIGHT-REGULATED WD1 (LWD1), a clock proteins regulating circadian period length and photoperiodic flowering.","ANTHOCYANIN11 (ATAN11)","ANTHOCYANIN11 (ATAN11);LIGHT-REGULATED WD 1 (LWD1)"]
["AT5G15070","lightcyan","Encodes a functional VIP1/PPIP5K-type ATP-grasp kinase that is involved in both InsP6 to InsP7 conversion and InsP7 to InsP8 conversion. It is the minor isoform in plants and is expressed in pollen.","ARABIDOPSIS HOMOLOG OF YEAST VIP1 2 (ATVIP2)","ARABIDOPSIS HOMOLOG OF YEAST VIP1 2 (ATVIP2);VIP1 HOMOLOG 2 (VIP2);VIP HOMOLOG 1 (VIH1)"]
["AT5G38880","lightcyan","HAUS augmin-like complex subunit;(source:Araport11)","AUGMIN SUBUNIT 5 (AUG5)","AUGMIN SUBUNIT 5 (AUG5)"]
["AT1G12820","lightcyan","Auxin receptor involved in primary and lateral root growth inhibition in response to nitrate. Target of miR393. Induced by nitrate in primary roots.","AUXIN SIGNALING F-BOX 3 (AFB3)","AUXIN SIGNALING F-BOX 3 (AFB3)"]
["AT4G31480","lightcyan","Required for plant growth, salt tolerance, and maintenance of the structure of the Golgi apparatus.","BETA1 COAT PROTEIN (beta1-COP)","BETA1 COAT PROTEIN (beta1-COP)"]
["AT3G60860","lightcyan","Encodes one of the functionally redundant ARF guanine-nucleotide exchange factors (ARF-GEFs). Functions as regulators of post-Golgi trafficking. The mRNA is cell-to-cell mobile.","BIG2 (BIG2)","BIG2 (BIG2)"]
["AT3G44340","lightcyan","homologous to yeast and animal Sec24 proteins; expression in yeast cells enhances their survival under oxidative stress conditions.","CLONE EIGHTY-FOUR (CEF)","CLONE EIGHTY-FOUR (CEF)"]
["AT5G42900","lightcyan","Acts with COR28 as a key regulator in the COP1-HY5 regulatory hub by regulating HY5 activity to ensure proper skotomorphogenic growth in the dark and photomorphogenic development in the light.","COLD REGULATED GENE 27 (COR27)","COLD REGULATED GENE 27 (COR27)"]
["AT1G14830","lightcyan","Encodes a dynamin-like protein that is involved in mitochondrial morphogenesis and pollen development. Protein is localized as speckles in the cytoplasm, partially co-localizes with mitochondrial markers, cell plate of dividing cells, and the tip of root hairs, root cap cells, and expanding part of trichoblasts.","DYNAMIN-LIKE 1C (DL1C)","DYNAMIN-LIKE 1C (ADL1C);ARABIDOPSIS DYNAMIN-LIKE PROTEIN 5 (ADL5);DYNAMIN RELATED PROTEIN 1C (DRP1C);DYNAMIN-LIKE 1C (DL1C)"]
["AT5G40740","lightcyan","Encodes a conserved AUGMIN subunit 6 (AUG6) which is known to be involved in microtuble nucleation. Mutants affect both male and female gametogenesis.","AUGMIN SUBUNIT 6 (AUG6)","GEMINI POLLEN 3 (GEM3);AUGMIN SUBUNIT 6 (AUG6)"]
["AT3G49310","lightcyan","Major facilitator superfamily protein;(source:Araport11)","GOLGI S-ADENOSYL METHIONE TRANSPORTER 3 (GOSAMT3)","GOLGI S-ADENOSYL METHIONE TRANSPORTER 3 (GOSAMT3)"]
["AT1G15880","lightcyan","Golgi SNARE 11 protein (GOS11)","GOLGI SNARE 11 (GOS11)","GOLGI SNARE 11 (GOS11); (atgos11)"]
["AT3G43300","lightcyan","AtMIN7 is an immunity associated Arabidopsis protein targeted by HopM1, a conserved Pseudomonas syringae virulence protein. AtMIN7 encodes one of the eight members of the Arabidopsis adenosine diphosphate (ADP) ribosylation factor (ARF) guanine nucleotide exchange factor (GEF) protein family. The AFR GEF proteins are key components of the vesicle trafficking system in eukaryotic cells. HopM1 mediates the destruction of AtMIN7 via the host proteasome. Critical for cuticle formation and related leaf surface defense against the bacterial pathogen Pseudomonas syringae pathovar tomato (Pto).","HOPM INTERACTOR 7 (ATMIN7)","HOPM INTERACTOR 7 (ATMIN7);BFA-VISUALIZED ENDOCYTIC TRAFFICKING DEFECTIVE1 (BEN1); (MIN7);BREFELDIN A-INHIBITED GUANINE NUCLEOTIDE-EXCHANGE PROTEIN 5 (BIG5)"]
["AT4G32120","lightcyan","Encodes a hydroxyproline O-galactosyltransferase.","HYDROXYPROLINE O-GALACTOSYLTRANSFERASE 2 (HPGT2)","HYDROXYPROLINE O-GALACTOSYLTRANSFERASE 2 (HPGT2)"]
["AT5G41950","lightcyan","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","HYPERSENSITIVE TO LATRUNCULIN B 1 (HLB1)","HYPERSENSITIVE TO LATRUNCULIN B 1 (HLB1)"]
["AT4G27750","lightcyan","A genetic locus involved in sugar sensing and coordinating carbohydrate synthesis and utilization by the whole plant. Lines carrying mutations in this gene shows restricted carbohydrate allocation to plant growth and seed set, elevated chlorophyll levels, and reduced sugar induction of starch biosynthesis.","IMPAIRED SUCROSE INDUCTION 1 (ISI1)","IMPAIRED SUCROSE INDUCTION 1 (ISI1)"]
["AT5G23450","lightcyan","Encodes a sphingosine kinase that specifically phosphorylates D-erythro-dihydrosphingosine (DHS), but not N-acetyl-DHS or D-threo-DHS. It also also phosphorylates D-erythro-sphingosine, trans-4, trans-8-sphingadienine and phytosphingosine.","LONG-CHAIN BASE (LCB) KINASE 1 (LCBK1)","LONG-CHAIN BASE (LCB) KINASE 1 (LCBK1);LONG-CHAIN BASE (LCB) KINASE 1 (ATLCBK1)"]
["AT1G11000","lightcyan","A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO4 belongs to the clade I, with AtMLO11 and AtMLO14. The gene is expressed during early seedling growth, in roots and lateral root primordia, in flower and fruit abscission zone, in vascular system of root, cotyledons and young leaves, it was not expressed in mature rosette leaves, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).","MILDEW RESISTANCE LOCUS O 4 (MLO4)","MILDEW RESISTANCE LOCUS O 4 (ATMLO4);MILDEW RESISTANCE LOCUS O 4 (MLO4)"]
["AT3G59770","lightcyan","Encodes a phosphoinositide phosphatase. The sac9 null mutant accumulates elevated levels of PtdIns(4,5)P2 and Ins(1,4,5)P3. The mutant plants have characteristics of constitutive stress responses.","SUPPRESSOR OF ACTIN 9 (SAC9)","MURUS 11 (MUR11);SUPPRESSOR OF ACTIN 9 (SAC9);ARABIDOPSIS THALIANA SUPPRESSOR OF ACTIN 9 (AtSAC9); (MUR11)"]
["AT3G55030","lightcyan","Encodes a phosphatidylglycerolphosphate synthase.","PHOSPHATIDYLGLYCEROLPHOSPHATE SYNTHASE 2 (PGPS2)","PHOSPHATIDYLGLYCEROLPHOSPHATE SYNTHASE 2 (PGPS2)"]
["AT1G53310","lightcyan","Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.Plays an important role in carbon and nitrogen metabolism.","PHOSPHOENOLPYRUVATE CARBOXYLASE 1 (PPC1)","PHOSPHOENOLPYRUVATE CARBOXYLASE 1 (ATPPC1);PEP(PHOSPHOENOLPYRUVATE) CARBOXYLASE 1 (PEPC1); (ATPEPC1);PHOSPHOENOLPYRUVATE CARBOXYLASE 1 (PPC1)"]
["AT2G03890","lightcyan","Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. The mRNA is cell-to-cell mobile.","PHOSPHOINOSITIDE 4-KINASE GAMMA 7 (PI4K GAMMA 7)","PHOSPHOINOSITIDE 4-KINASE GAMMA 7 (ATPI4K GAMMA 7);UBIQUITIN-LIKE DOMAIN KINASE GAMMA 7 (UBDK GAMMA 7);PHOSPHOINOSITIDE 4-KINASE GAMMA 7 (PI4K GAMMA 7)"]
["AT3G55480","lightcyan","Encodes PAT2, a putative beta-subunit of adaptor protein complex 3 (AP-3) that can partially complement the corresponding yeast mutant. Mediates the biogenesis and function of lytic vacuoles.","PROTEIN AFFECTED TRAF&#64257;CKING 2 (PAT2)","PROTEIN AFFECTED TRAF&#64257;CKING 2 (PAT2);BETA-SUBUNIT OF ADAPTOR PROTEIN COMPLEX 3 (AP-3 beta);WEAK ACID TOLERANT 1 (WAT1)"]
["AT5G24470","lightcyan","Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Acts as transcriptional repressor of CCA1 and LHY. Acts additively with EC, PRR7 and PRR9 to regulate hypocotyl growth under photoperiodic conditions.","PSEUDO-RESPONSE REGULATOR 5 (PRR5)","PSEUDO-RESPONSE REGULATOR 5 (PRR5);PSEUDO-RESPONSE REGULATOR 5 (APRR5)"]
["AT1G78570","lightcyan","Encodes a UDP-L-Rhamnose synthase involved in the biosynthesis of rhamnose, a major monosaccharide component of pectin. Catalyzes the conversion of UDP-D-Glc to UDP-L-Rha. The dehydrogenase domain of RHM1 was shown to catalyze the conversion of UDP-D-Glc to the reaction intermediate UDP-4-keto-6-deoxy-D-Glc using recombinant protein assay but the activity of the full-length protein was not determined as it could not be expressed in <i>E. coli</i>.","RHAMNOSE BIOSYNTHESIS 1 (RHM1)","RHAMNOSE BIOSYNTHESIS 1 (RHM1);ARABIDOPSIS THALIANA RHAMNOSE BIOSYNTHESIS 1 (ATRHM1);REPRESSOR OF LRX1 1 (ROL1)"]
["AT1G25490","lightcyan","One of three genes encoding phosphoprotein phosphatase 2A regulatory subunit A; Recessive ethylene-response mutant EER1 displays increased ethylene sensitivity in the hypocotyl and stem","ROOTS CURL IN NPA (RCN1)","ROOTS CURL IN NPA (RCN1); (REGA); (ATB BETA BETA);ENHANCED ETHYLENE RESPONSE 1 (EER1)"]
["AT1G03060","lightcyan","Encodes a WD/BEACH domain protein involved in cell morphogenesis and ribonucleoprotein particle formation. It interacts with the P-body core component DCP2, associates to mRNA processing bodies (P-bodies), and regulates their assembly upon salt stress. It accumulates at the root hair apex via post-Golgi compartments and positively regulates tip growth by maintaining tip-focused vesicle secretion and filamentous-actin integrity.","SPIRRIG (SPI)","SPIRRIG (SPI);BEACH-DOMAIN HOMOLOG A1 (BCHA1)"]
["AT2G07360","lightcyan","TPLATE-associated SH3 domain containing protein.","TPLATE-ASSOCIATED SH3 DOMAIN CONTAINING PROTEIN (TASH3)","TPLATE-ASSOCIATED SH3 DOMAIN CONTAINING PROTEIN (TASH3)"]
["AT3G17900","lightcyan","Plant specific component of TRAPPII vesicle transport complex.","TRAPP-INTERACTING PLANT PROTEIN (TRIPP)","TRAPP-INTERACTING PLANT PROTEIN (TRIPP)"]
["AT5G22030","lightcyan","ubiquitin-specific protease 8;(source:Araport11)","UBIQUITIN-SPECIFIC PROTEASE 8 (UBP8)","UBIQUITIN-SPECIFIC PROTEASE 8 (UBP8)"]
["AT4G02030","lightcyan","Vps51/Vps67 family (components of vesicular transport) protein;(source:Araport11)","UNHINGED (UNH)","UNHINGED (UNH);VACUOLAR PROTEIN SORTING 51 (VPS51);MODIFIED TRANSPORT TO THE VACUOLE 16 (MTV16)"]
["AT2G25590","magenta","Plant Tudor-like protein with possible chromatin-associated functions expressed in phloem."]
["AT1G75280","magenta","isoflavone reductase, putative, identical to SP:P52577 Isoflavone reductase homolog P3 (EC 1.3.1.-) {Arabidopsis thaliana}; contains Pfam profile PF02716: isoflavone reductase. Involved in response to oxidative stress. The mRNA is cell-to-cell mobile."]
["AT3G42630","magenta","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G53110","magenta","proton pump-interactor;(source:Araport11)"]
["AT3G44820","magenta","Phototropic-responsive NPH3 family protein;(source:Araport11)"]
["AT5G61610","magenta","Oleosin family protein;(source:Araport11)"]
["AT5G20050","magenta","Protein kinase superfamily protein;(source:Araport11)"]
["AT5G58790","magenta","hypothetical protein;(source:Araport11)"]
["AT5G03795","magenta","Exostosin family protein;(source:Araport11)"]
["AT3G17655","magenta","hypothetical protein;(source:Araport11)"]
["AT2G34315","magenta","avirulence induced family protein;(source:Araport11)"]
["AT1G77770","magenta","forkhead box protein, putative (DUF1644);(source:Araport11)"]
["AT2G25720","magenta","hypothetical protein;(source:Araport11)"]
["AT2G14045","magenta","c-Myc-binding protein;(source:Araport11)"]
["AT5G54870","magenta","inositol-1,4,5-trisphosphate 5-phosphatase;(source:Araport11)"]
["AT1G70985","magenta","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT1G47540","magenta","Scorpion toxin-like knottin superfamily protein;(source:Araport11)"]
["AT5G23850","magenta","O-glucosyltransferase rumi-like protein (DUF821);(source:Araport11)"]
["AT1G08270","magenta","vacuolar protein sorting-associated protein;(source:Araport11)"]
["AT5G43770","magenta","proline-rich family protein;(source:Araport11)"]
["AT3G56470","magenta","F-box family protein;(source:Araport11)"]
["AT3G29270","magenta","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G48990","magenta","Oleosin family protein;(source:Araport11)"]
["AT1G21280","magenta","Copia-like polyprotein/retrotransposon;(source:Araport11)"]
["AT1G54217","magenta","Ribosomal protein L18ae family;(source:Araport11)"]
["AT4G18930","magenta","RNA ligase/cyclic nucleotide phosphodiesterase family protein;(source:Araport11)"]
["AT1G31130","magenta","polyadenylate-binding protein 1-B-binding protein;(source:Araport11)"]
["AT1G63820","magenta","CCT motif family protein;(source:Araport11)"]
["AT1G11700","magenta","senescence regulator (Protein of unknown function, DUF584);(source:Araport11)"]
["AT2G36290","magenta","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT1G02160","magenta","Cox19 family protein (CHCH motif);(source:Araport11)"]
["AT5G66558","magenta","Natural antisense transcript overlaps with AT5G66560;(source:Araport11)"]
["AT1G03280","magenta","Transcription initiation factor TFIIE subunit alpha"]
["AT3G49160","magenta","Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress."]
["AT1G48540","magenta","Outer arm dynein light chain 1 protein;(source:Araport11)"]
["AT3G52340","magenta","sucrose-phosphatase (SPP2)"]
["AT1G74280","magenta","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT3G47670","magenta","Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11)"]
["AT2G24690","magenta","Transcriptional factor B3 family protein;(source:Araport11)"]
["AT3G01930","magenta","Major facilitator superfamily protein;(source:Araport11)"]
["AT2G39950","magenta","flocculation protein;(source:Araport11)"]
["AT5G15280","magenta","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G27260","magenta","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11)"]
["AT2G10950","magenta","BSD domain-containing protein;(source:Araport11)"]
["AT2G25920","magenta","pollen-specific LRR extensin-like protein;(source:Araport11)"]
["AT5G27630","magenta","Acyl-CoA binding protein with high affinity for oleoyl-CoA. Expressed in all plant organs. Involved in fatty acid transport. Plays a role in determining seed oil content."]
["AT4G23930","magenta","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11)"]
["AT5G22875","magenta","transmembrane protein;(source:Araport11)"]
["AT5G01960","magenta","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G35190","magenta","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT5G42670","magenta","Agenet domain-containing protein;(source:Araport11)"]
["AT2G21780","magenta","hypothetical protein;(source:Araport11)"]
["AT2G24420","magenta","DNA repair ATPase-related"]
["AT1G64563","magenta","other_RNA;(source:Araport11)"]
["AT1G15175","magenta","Natural antisense transcript overlaps with AT1G15170;(source:Araport11)"]
["AT3G06780","magenta","glycine-rich protein;(source:Araport11)"]
["AT5G60580","magenta","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G76185","magenta","NADH-ubiquinone oxidoreductase chain;(source:Araport11)"]
["AT5G59170","magenta","Proline-rich extensin-like family protein;(source:Araport11)"]
["AT1G71240","magenta","chromosome-partitioning protein, putative (DUF639);(source:Araport11)"]
["AT4G11800","magenta","Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11)"]
["AT4G10810","magenta","hypothetical protein;(source:Araport11)"]
["AT1G24881","magenta","F-box family protein;(source:Araport11)"]
["AT3G20620","magenta","F-box family protein-like protein;(source:Araport11)"]
["AT3G11530","magenta","Vacuolar protein sorting 55 (VPS55) family protein;(source:Araport11)"]
["AT5G38050","magenta","RNA polymerase II transcription elongation factor;(source:Araport11)"]
["AT4G01410","magenta","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11)"]
["AT4G25020","magenta","D111/G-patch domain-containing protein;(source:Araport11)"]
["AT3G01570","magenta","Oleosin family protein;(source:Araport11)"]
["AT5G58090","magenta","O-Glycosyl hydrolases family 17 protein;(source:Araport11)"]
["AT1G70640","magenta","octicosapeptide/Phox/Bem1p (PB1) domain-containing protein;(source:Araport11)"]
["AT1G24800","magenta","F-box family protein;(source:Araport11)"]
["AT1G03890","magenta","RmlC-like cupins superfamily protein;(source:Araport11)"]
["AT1G75310","magenta","auxin-like 1 protein;(source:Araport11)"]
["AT5G47160","magenta","YDG/SRA domain-containing protein;(source:Araport11)"]
["AT5G24450","magenta","Transcription factor IIIC, subunit 5;(source:Araport11)"]
["AT5G17090","magenta","Cystatin/monellin superfamily protein;(source:Araport11)"]
["AT2G39980","magenta","HXXXD-type acyl-transferase family protein;(source:Araport11)"]
["AT5G51370","magenta","RNI-like superfamily protein;(source:Araport11)"]
["AT5G18980","magenta","ARM repeat superfamily protein;(source:Araport11)"]
["AT1G04030","magenta","eisosome protein;(source:Araport11)"]
["AT3G23180","magenta","HR-like lesion-inducing protein-like protein;(source:Araport11)"]
["AT4G31980","magenta","PPPDE thiol peptidase family protein;(source:Araport11)"]
["AT5G20880","magenta","transposable_element_gene;(source:Araport11);retrotransposon family;(source:TAIR10)"]
["AT3G30460","magenta","RING/U-box superfamily protein;(source:Araport11)"]
["AT5G50315","magenta","transposable_element_gene;(source:Araport11);Mutator-like transposase family, has a 5.0e-14 P-value blast match to Q9XE24 /118-277 Pfam PF03108 MuDR family transposase (MuDr-element domain);(source:TAIR10)"]
["AT1G30970","magenta","Encodes SUF4 (SUPPRESSOR of FRI 4), a putative zinc-finger-containing transcription factor that is required for delayed flowering in winter-annual Arabidopsis. suf4 mutations strongly suppress the late-flowering phenotype of FRI (FRIGIDA) mutants. suf4 mutants also show reduced H3K4 trimethylation at FLC (FLOWERING LOCUS C), a floral inhibitor. SUF4 may act to specifically recruit a putative histone H3 methyltransferase EFS (EARLY FLOWERING IN SHORT DAYS) and the PAF1-like complex to the FLC locus."]
["AT1G72880","magenta","Survival protein SurE-like phosphatase/nucleotidase;(source:Araport11)"]
["AT1G77100","magenta","peroxidase superfamily protein;(source:Araport11)"]
["AT5G18900","magenta","2-oxoglutarate-dependent dioxygenase"]
["AT5G55410","magenta","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)"]
["AT3G11930","magenta","Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)"]
["AT3G49300","magenta","proline-rich family protein;(source:Araport11)"]
["AT5G35525","magenta","PLAC8 family protein;(source:Araport11)"]
["AT1G04660","magenta","glycine-rich protein;(source:Araport11)"]
["AT5G18750","magenta","DNAJ heat shock N-terminal domain-containing protein;(source:Araport11)"]
["AT4G13110","magenta","BSD domain-containing protein;(source:Araport11)"]
["AT5G27037","magenta","pseudogene of RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11)"]
["AT5G43790","magenta","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G17280","magenta","Group XIV ubiquitin-conjugating enzyme that functions negative regulation of drought stress."]
["AT3G19470","magenta","F-box and associated interaction domains-containing protein;(source:Araport11)"]
["AT1G69430","magenta","Son of sevenless protein;(source:Araport11)"]
["AT4G01970","magenta","Encodes a a raffinose and high affinity stachyose synthase as well as a stachyose and Gol specific galactosylhydrolase enzyme activity.AtRS4 is a sequential multifunctional RafS and StaS as well as a high affinity StaS, accepting only Raf and Gol for Sta product formation. AtRS4 possesses a Sta and Gol specific galactosylhydrolase enzyme activity."]
["AT1G11440","magenta","hypothetical protein;(source:Araport11)"]
["AT4G39838","magenta","Natural antisense transcript overlaps with AT4G39840;(source:Araport11)"]
["AT4G33100","magenta","protein phosphatase;(source:Araport11)"]
["AT3G61670","magenta","extra-large G-like protein, putative (DUF3133);(source:Araport11)"]
["AT1G65000","magenta","F-box only protein;(source:Araport11)"]
["AT3G11290","magenta","Myb/SANT-like DNA-binding domain protein;(source:Araport11)"]
["AT1G12810","magenta","proline-rich family protein;(source:Araport11)"]
["AT3G44830","magenta","Lecithin:cholesterol acyltransferase family protein;(source:Araport11)"]
["AT5G52330","magenta","TRAF-like superfamily protein;(source:Araport11)"]
["AT5G47650","magenta","Encodes an ADP-ribose pyrophosphatase that confers enhanced tolerance to oxidative stress."]
["AT1G32260","magenta","envelope glycoprotein;(source:Araport11)"]
["AT2G36895","magenta","D-tagatose-1,6-bisphosphate aldolase subunit;(source:Araport11)"]
["AT1G27921","magenta","Natural antisense transcript overlaps with AT1G27920;(source:Araport11)"]
["AT5G24130","magenta","polypyrimidine tract-binding-like protein;(source:Araport11)"]
["AT3G05040","magenta","Encodes member of importin/exportin family. Involved in timing of shoot maturation. Involved in miRNA transport. Mutants flower early and have small, curled leaves and reduced abundance of certain miRNA species."]
["AT3G62200","magenta","Putative endonuclease or glycosyl hydrolase;(source:Araport11)"]
["AT1G53025","magenta","Ubiquitin-conjugating enzyme family protein;(source:Araport11)"]
["AT4G36980","magenta","CLK4-associating serine/arginine-rich protein;(source:Araport11)"]
["AT5G37710","magenta","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT3G48020","magenta","hypothetical protein;(source:Araport11)"]
["AT1G69060","magenta","Chaperone DnaJ-domain superfamily protein;(source:Araport11)"]
["AT1G49832","magenta","None;(source:Araport11)"]
["AT1G60970","magenta","SNARE-like superfamily protein;(source:Araport11)"]
["AT3G21010","magenta","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 4.6e-15 P-value blast match to dbj|BAA78426.1| polyprotein (AtRE2-1) (Arabidopsis thaliana) (Ty1_Copia-element);(source:TAIR10)"]
["AT5G53330","magenta","Ubiquitin-associated/translation elongation factor EF1B protein;(source:Araport11)"]
["AT1G17430","magenta","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT1G23120","magenta","Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11)"]
["AT3G13226","magenta","regulatory protein RecX family protein;(source:Araport11)"]
["AT3G56750","magenta","plant/protein;(source:Araport11)"]
["AT4G33740","magenta","myb-like protein X;(source:Araport11)"]
["AT4G39240","magenta","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT3G27030","magenta","transmembrane protein;(source:Araport11)"]
["AT3G51130","magenta","transmembrane protein;(source:Araport11)"]
["AT3G54940","magenta","Papain family cysteine protease;(source:Araport11)"]
["AT1G17620","magenta","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11)"]
["AT3G27610","magenta","Nucleotidylyl transferase superfamily protein;(source:Araport11)"]
["AT4G19870","magenta","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT1G80160","magenta","Vicinal oxygen chelate (VOC) superfamily member."]
["AT5G04885","magenta","Encodes a beta-glucosidase involved in xyloglucan metabolism."]
["AT2G28490","magenta","RmlC-like cupins superfamily protein;(source:Araport11)"]
["AT2G42170","magenta","Actin family protein;(source:Araport11)"]
["AT3G02290","magenta","RING/U-box superfamily protein;(source:Araport11)"]
["AT3G60340","magenta","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT5G04110","magenta","DNA GYRASE B3;(source:Araport11)"]
["AT2G23090","magenta","Uncharacterized protein family SERF;(source:Araport11)"]
["AT4G28330","magenta","pyrroline-5-carboxylate reductase;(source:Araport11)"]
["AT4G28480","magenta","DNAJ heat shock family protein;(source:Araport11)"]
["AT5G12040","magenta","Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein;(source:Araport11)"]
["AT5G35580","magenta","Protein kinase superfamily protein;(source:Araport11)"]
["AT5G01710","magenta","methyltransferase;(source:Araport11)"]
["AT3G53860","magenta","INO80 complex subunit D-like protein;(source:Araport11)"]
["AT4G13030","magenta","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT2G41070","magenta","Transcription factor homologous to ABI5. Regulates AtEm1 expression by binding directly at the AtEm1 promoter. Located in the nucleus and expressed during seed maturation in the cotyledons and later in the whole embryo."]
["AT5G46620","magenta","hypothetical protein;(source:Araport11)"]
["AT1G70740","magenta","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G73210","magenta","hypothetical protein (DUF789);(source:Araport11)"]
["AT5G44380","magenta","FAD-binding Berberine family protein;(source:Araport11)"]
["AT1G19650","magenta","Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11)"]
["AT5G15710","magenta","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT2G14060","magenta","encodes a protein whose sequence is similar to SAM:salicylic acid carboxyl methyltransferase (SAMT) (GI:6002712)(Clarkia breweri) and to SAM:benzoic acid carboxyl methyltransferase (BAMT)(GI:9789277)(Antirrhinum majus)"]
["AT3G62920","magenta","zinc metalloproteinase aureolysin;(source:Araport11)"]
["AT3G04160","magenta","U11/U12 small nuclear ribonucleoprotein;(source:Araport11)"]
["AT1G77080","magenta","MADS domain protein - flowering regulator that is closely related to FLC. Deletion of this locus in Nd ecotype is correlated with earlier flowering in short days suggesting function as a negative regulator of flowering."]
["AT1G76065","magenta","LYR family of Fe/S cluster biogenesis protein;(source:Araport11)"]
["AT5G08430","magenta","SWIB/MDM2 and Plus-3 and GYF domain-containing protein;(source:Araport11)"]
["AT1G05150","magenta","Calcium-binding tetratricopeptide family protein;(source:Araport11)"]
["AT1G77530","magenta","O-methyltransferase family protein;(source:Araport11)"]
["AT3G03320","magenta","RNA-binding ASCH domain protein;(source:Araport11)"]
["AT3G27540","magenta","beta-1,4-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT2G26030","magenta","F-box/RNI-like/FBD-like domains-containing protein;(source:Araport11)"]
["AT1G32460","magenta","hypothetical protein;(source:Araport11)"]
["AT5G37485","magenta","other_RNA;(source:Araport11)"]
["AT1G68185","magenta","Ubiquitin-like superfamily protein;(source:Araport11)"]
["AT2G05580","magenta","Glycine-rich protein family;(source:Araport11)"]
["AT1G25370","magenta","hypothetical protein (DUF1639);(source:Araport11)"]
["AT5G19070","magenta","SNARE associated Golgi protein family;(source:Araport11)"]
["AT1G65720","magenta","transmembrane protein;(source:Araport11)"]
["AT3G15090","magenta","GroES-like zinc-binding alcohol dehydrogenase family protein;(source:Araport11)"]
["AT2G39170","magenta","MEF2BNB-like protein;(source:Araport11)"]
["AT3G07720","magenta","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT1G07040","magenta","plant/protein;(source:Araport11)"]
["AT1G19980","magenta","cytomatrix protein-like protein;(source:Araport11)"]
["AT4G03250","magenta","Homeodomain-like superfamily protein;(source:Araport11)"]
["AT2G15010","magenta","Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660."]
["AT5G35960","magenta","Protein kinase family protein;(source:Araport11)"]
["AT2G38920","magenta","SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-like protein;(source:Araport11)"]
["AT1G24600","magenta","hypothetical protein;(source:Araport11)"]
["AT1G02816","magenta","DUF538 domain protein , tandemly repeated with AT1G02813 (ASD1). Expression is induced by ABA and promoter contains ABA response elements. Mutants show increased sensitivity to ABA."]
["AT1G12064","magenta","transmembrane protein;(source:Araport11)"]
["AT5G25770","magenta","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT4G04320","magenta","malonyl-CoA decarboxylase family protein;(source:Araport11)"]
["AT1G22180","magenta","Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11)"]
["AT5G44860","magenta","polyadenylate-binding protein 1-B-binding protein;(source:Araport11)"]
["AT3G18570","magenta","Oleosin family protein;(source:Araport11)"]
["AT2G34200","magenta","RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11)"]
["AT1G44820","magenta","Peptidase M20/M25/M40 family protein;(source:Araport11)"]
["AT3G11880","magenta","transmembrane protein, putative (Protein of unknown function DUF2359, transmembrane);(source:Araport11)"]
["AT3G28153","magenta","transposable_element_gene;(source:Araport11);non-LTR retrotransposon family (LINE), has a 1.3e-30 P-value blast match to GB:AAB41224 ORF2 (LINE-element) (Rattus norvegicus);(source:TAIR10)"]
["AT5G52430","magenta","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT3G47680","magenta","DNA binding protein;(source:Araport11)"]
["AT3G09010","magenta","Protein kinase superfamily protein;(source:Araport11)"]
["AT2G36500","magenta","CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein;(source:Araport11)"]
["AT5G15537","magenta","transmembrane protein;(source:Araport11)"]
["AT1G01725","magenta","adenylosuccinate synthetase;(source:Araport11)"]
["AT1G45150","magenta","alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase;(source:Araport11)"]
["AT5G19590","magenta","putative DUF538 domain-containing protein"]
["AT2G20740","magenta","Tetraspanin family protein;(source:Araport11)"]
["AT5G41690","magenta","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT1G80245","magenta","Spc97 / Spc98 family of spindle pole body (SBP) component;(source:Araport11)"]
["AT5G20790","magenta","transmembrane protein;(source:Araport11)"]
["AT3G25160","magenta","ER lumen protein retaining receptor family protein;(source:Araport11)"]
["AT3G52030","magenta","F-box family protein with WD40/YVTN repeat doamin;(source:Araport11)"]
["AT1G54860","magenta","Glycoprotein membrane precursor GPI-anchored;(source:Araport11)"]
["AT5G66090","magenta","cell wall integrity/stress response component;(source:Araport11)"]
["AT4G16070","magenta","lipase class 3 family protein;(source:Araport11)"]
["AT1G29680","magenta","histone acetyltransferase (DUF1264);(source:Araport11)"]
["AT3G49645","magenta","FAD-binding protein;(source:Araport11)"]
["AT1G75760","magenta","ER lumen protein retaining receptor family protein;(source:Araport11)"]
["AT2G36980","magenta","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G69980","magenta","structural polyprotein;(source:Araport11)"]
["AT2G29910","magenta","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT1G04960","magenta","golgin family A protein (DUF1664);(source:Araport11)"]
["AT5G15910","magenta","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT4G32290","magenta","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT5G44360","magenta","FAD-binding Berberine family protein;(source:Araport11)"]
["AT4G16146","magenta","cAMP-regulated phosphoprotein 19-related protein;(source:Araport11)"]
["AT4G35140","magenta","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT3G02065","magenta","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT4G34480","magenta","O-Glycosyl hydrolases family 17 protein;(source:Araport11)"]
["AT1G02770","magenta","hypothetical protein;(source:Araport11)"]
["AT1G23440","magenta","Peptidase C15, pyroglutamyl peptidase I-like protein;(source:Araport11)"]
["AT1G12760","magenta","Zinc finger, C3HC4 type (RING finger) family protein;(source:Araport11)"]
["AT5G19860","magenta","transmembrane protein, putative (Protein of unknown function, DUF538);(source:Araport11)"]
["AT4G36195","magenta","Serine carboxypeptidase S28 family protein;(source:Araport11)"]
["AT2G37290","magenta","Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11)"]
["AT2G42040","magenta","WRC protein;(source:Araport11)"]
["AT1G03270","magenta","CBS domain protein with a domain protein (DUF21);(source:Araport11)"]
["AT3G21215","magenta","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT2G15980","magenta","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G41000","magenta","Chaperone DnaJ-domain superfamily protein;(source:Araport11)"]
["AT1G02310","magenta","Glycosyl hydrolase superfamily protein;(source:Araport11)"]
["AT5G49290","magenta","receptor like protein 56;(source:Araport11)"]
["AT3G16190","magenta","Isochorismatase family protein;(source:Araport11)"]
["AT2G45720","magenta","ARM repeat superfamily protein;(source:Araport11)"]
["AT1G14640","magenta","SWAP (Suppressor-of-White-APricot)/surp domain-containing protein;(source:Araport11)"]
["AT1G25211","magenta","F-box family protein;(source:Araport11)"]
["AT3G23480","magenta","Cyclopropane-fatty-acyl-phospholipid synthase;(source:Araport11)"]
["AT3G50650","magenta","GRAS family transcription factor;(source:Araport11)"]
["AT2G30600","magenta","BTB/POZ domain-containing protein;(source:Araport11)"]
["AT1G25055","magenta","F-box family protein;(source:Araport11)"]
["AT4G36700","magenta","RmlC-like cupins superfamily protein;(source:Araport11)"]
["AT1G30935","magenta","Possibly not a pseudogene based on evidence for transcription (RNA-seq) and translation (Ribo-seq) described in PMID:27791167"]
["AT3G06170","magenta","Serinc-domain containing serine and sphingolipid biosynthesis protein;(source:Araport11)"]
["AT5G10740","magenta","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT3G27290","magenta","RNI-like superfamily protein;(source:Araport11)"]
["AT4G19860","magenta","Encodes a cytosolic calcium-independent phospholipase A."]
["AT3G23175","magenta","HR-like lesion-inducing protein-like protein;(source:Araport11)"]
["AT5G61450","magenta","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT1G10410","magenta","CW14 protein (DUF1336);(source:Araport11)"]
["AT3G22750","magenta","Protein kinase superfamily protein;(source:Araport11)"]
["AT2G03510","magenta","SPFH/Band 7/PHB domain-containing membrane-associated protein family;(source:Araport11)"]
["AT1G18335","magenta","Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11)"]
["AT5G22280","magenta","peptidyl-prolyl cis-trans isomerase G;(source:Araport11)"]
["AT1G25150","magenta","F-box family protein;(source:Araport11)"]
["AT1G28640","magenta","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates."]
["AT3G51570","magenta","Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11)"]
["AT4G14290","magenta","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT1G13880","magenta","ELM2 domain-containing protein;(source:Araport11)"]
["AT5G41860","magenta","transmembrane protein;(source:Araport11)"]
["AT4G20480","magenta","Putative endonuclease or glycosyl hydrolase;(source:Araport11)"]
["AT4G19500","magenta","nucleoside-triphosphatase/transmembrane receptor/nucleotide binding/ATP binding protein;(source:Araport11)"]
["AT2G23450","magenta","Protein kinase superfamily protein;(source:Araport11)"]
["AT2G20230","magenta","Tetraspanin family protein;(source:Araport11)"]
["AT3G13965","magenta","Probably not a pseudogene based on evidence for transcription (RNA-seq) and translation (Ribo-seq) described in PMID:27791167"]
["AT1G61065","magenta","1,3-beta-glucan synthase component (DUF1218);(source:Araport11)"]
["AT1G13220","magenta","Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure. Member of a small gene family in Arabidopsis containing 4 proteins (LNC1-4 or CRWN 1-4) with redundant functions in protection from oxidative damage, control of nuclear morphology and degradation of ABI5."]
["AT1G73950","magenta","Transmembrane Fragile-X-F-associated protein;(source:Araport11)"]
["AT3G51860","magenta","Vacuolar Ca(2+)/H(+) transporter that forms a complex with CAX1 that plays a role in diverse processes including phosphate homeostasis and heavy metal tolerance"]
["AT2G42010","magenta","phospholipase D (PLDbeta)"]
["AT5G64780","magenta","holocarboxylase synthetase;(source:Araport11)"]
["AT2G33051","magenta","Natural antisense transcript overlaps with AT2G33050;(source:Araport11)"]
["AT3G56820","magenta","RmlC-type cupin;(source:Araport11)"]
["AT1G18940","magenta","Nodulin-like / Major Facilitator Superfamily protein;(source:Araport11)"]
["AT1G14950","magenta","Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11)"]
["AT5G03640","magenta","AGCVIII kinase involved in the pulse-induced first positive phototropism.","AGCVIIIA KINASE 1-8 (AGC1-8)"]
["AT3G07700","magenta","ABC1K7 is a member of an atypical protein kinase family that is induced by salt stress. Loss of function mutations affect the metabolic profile of chloroplast lipids. It appears to function along with ABC1K8 in mediating lipid membrane changes in response to stress.","SALT-INDUCED ABC1 KINASE 1 (SIA1)","(ABC1K7);SALT-INDUCED ABC1 KINASE 1 (SIA1); (ATSIA1)"]
["AT4G27160","magenta","seed storage albumin 3;(source:Araport11)","SEED STORAGE ALBUMIN 3 (SESA3)","(AT2S3);SEED STORAGE ALBUMIN 3 (SESA3)"]
["AT1G31280","magenta","Encodes Argonaute gene that binds viral siRNAs and is involved in antiviral defense response. Regulates innate immunity.Mutants have increased susceptibility to Potato virus X and tobacco rattle virus.","ARGONAUTE 2 (AGO2)","(ATAGO2);ARGONAUTE 2 (AGO2)"]
["AT3G51120","magenta","zinc finger CCCH domain-containing protein 44;(source:Araport11)","(ATC3H44)","(ATC3H44)"]
["AT1G19860","magenta","Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11)","(ATC3H6)","(ATC3H6)"]
["AT5G63260","magenta","Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11)","(ATC3H67)","(ATC3H67)"]
["AT5G03415","magenta","Encodes a homolog of the animal DP protein. DP, in animals, forms a heterodimer with E2F and plays a central role in G1/S transition in the cell division cycle. DPB has been shown to interact with non phosphorylated E2Fc; when E2Fc is phosphorylated, the formation of the E2Fc/DPB heterodimer is lost.","(DPB)","(ATDPB); (DPB)"]
["AT5G05810","magenta","RING/U-box superfamily protein;(source:Araport11)","(ATL43)","(ATL43)"]
["AT3G27560","magenta","encodes a protein with kinase domains, including catalytic domains for serine/threonine as well as tyrosine kinases. a member of multi-gene family and is expressed in all tissues examined.","(ATN1)","(ATN1)"]
["AT2G31450","magenta","DNA glycosylase superfamily protein;(source:Araport11)","(ATNTH1)","(ATNTH1)"]
["AT3G30775","magenta","Encodes a proline oxidase that is predicted to localize to the inner mitochondrial membrane, its mRNA expression induced by high levels of Al and by osmotic stress. The promoter contains an L-proline-inducible element.","EARLY RESPONSIVE TO DEHYDRATION 5 (ERD5)","(AT-POX);PROLINE DEHYDROGENASE (PRODH);EARLY RESPONSIVE TO DEHYDRATION 5 (ERD5);PROLINE DEHYDROGENASE 1 (PDH1); (PRO1); (ATPDH);ARABIDOPSIS THALIANA PROLINE OXIDASE (ATPOX)"]
["AT5G63870","magenta","Encodes a nuclear localized serine/threonine phosphatase that appears to be regulated by redox activity and is a positive regulator of cryptochrome mediated blue light signalling.","SERINE/THREONINE PHOSPHATASE 7 (PP7)","(ATPP7);SERINE/THREONINE PHOSPHATASE 7 (PP7)"]
["AT4G35860","magenta","GTP-binding protein ATGB2","GTP-BINDING 2 (GB2)","(ATRABB1B);GTP-BINDING 2 (ATGB2); (ATRAB2C);GTP-BINDING 2 (GB2)"]
["AT3G18820","magenta","RAB7 homolog, forms retromer complex with VPS35; ES17 prevents the retromer complex to endosome anchoring, resulting in retention of RABG3f. The interaction of RABG3f?VPS35 functinons as a checkpoint in the control of traffic toward the vacuole.","RAB GTPASE HOMOLOG G3F (RAB7B)","(ATRABG3F);RAB GTPASE HOMOLOG G3F (ATRAB7B); (RAB71); (RABG3F); (RAB7B);RAB GTPASE HOMOLOG G3F (RAB7B); (ATRABG1F)"]
["AT4G01810","magenta","Sec23 homolog , forms a distinct clade with SEC23D.Mutants have defects in pollen exine patterning, tapetal development and pollen intine formation.","(ATSEC23A)","(ATSEC23A)"]
["AT5G08335","magenta","Encodes an isoprenyl cysteine methylatransferase (ICMT) involved in the post-translational processing of proteins that have a C-terminal CaaX box. This protein appears to have higher catalytic activity and a higher transcript expression level than the other ICMT present in Arabidopsis (At5g23320). Analysis of ICMT RNAi lines suggests that this protein is involved in flower and stem development.","(ATSTE14B)","(ATSTE14B);ISOPRENYL CYSTEINE METHYLTRANSFERASE B (ICMTB);ARABIDOPSIS THALIANA ISOPRENYL CYSTEINE METHYLTRANSFERASE B (ATICMTB)"]
["AT1G04070","magenta","Subunit of the TOM complex, a translocase in the outer mitochondrial membrane that selectively allows proteins with a mitochondrial targeting sequence to enter the mitochondrion.","TRANSLOCASE OF OUTER MEMBRANE 22-I (TOM22-I)","(ATTOM22-I);TRANSLOCASE OF OUTER MEMBRANE 22-I (TOM22-I)"]
["AT4G26640","magenta","member of WRKY Transcription Factor; Group I","(WRKY20)","(AtWRKY20); (WRKY20)"]
["AT2G30080","magenta","member of Fe(II) transporter isolog family. Gene expression is not regulated by iron, copper, or zinc deficiency or excess.","(ZIP6)","(ATZIP6); (ZIP6)"]
["AT4G02640","magenta","Encodes a basic leucine zipper (bZIP) transcription factor AtbZIP10. AtbZIP10 shuttles between the nucleus and the cytoplasm. It binds consensus G- and C-box DNA sequences. AtbZIP10 acts antagonistically with LSD1 in both pathogen-induced hypersensitive response and basal defense responses.","(BZO2H1)","(BZO2H1)"]
["AT5G55240","magenta","Catalyze hydroperoxide-dependent mono-oxygenation reactions. Require calcium for peroxygenase activity. Probably deeply buried in lipid droplets or microsomes.","ARABIDOPSIS THALIANA PEROXYGENASE 2 (ATPXG2)","(CLO2);ARABIDOPSIS THALIANA PEROXYGENASE 2 (ATPXG2)"]
["AT3G17800","magenta","mRNA level of the MEB5.2 gene (At3g17800) remains unchanged after cutting the inflorescence stem. Interacts with chloroplast chaperone CLPC1, which unfolds and delivers substrates to the stromal CLPPRT protease complex for degradation. Likely involved in senescence. Forms a small module with CLPD, connecting to DUF179-3, CLPX1, and CLPB3.","(DUF760?5)","(DUF760-6); (DUF760?5)"]
["AT1G22770","magenta","Together with CONSTANTS (CO) and FLOWERING LOCUS T (FT), GIGANTEA promotes flowering under long days in a circadian clock-controlled flowering pathway. GI acts earlier than CO and FT in the pathway by increasing CO and FT mRNA abundance. Located in the nucleus. Regulates several developmental processes, including photoperiod-mediated flowering, phytochrome B signaling, circadian clock, carbohydrate metabolism, and cold stress response. The gene's transcription is controlled by the circadian clock and it is post-transcriptionally regulated by light and dark. Forms a complex with FKF1 on the CO promoter to regulate CO expression. The mRNA is cell-to-cell mobile.","GIGANTEA (GI)","(FB);GIGANTEA (GI)"]
["AT5G62620","magenta","Encodes a Golgi-localized hydroxyproline-O-galactosyltransferase. Mutants display multiple phenotypes including reduced seed coat mucilage and accelerated leaf senescence.","(GALT6)","(GALT6)"]
["AT1G72830","magenta","Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues. Expression is upregulated in the shoot of cax1/cax3 mutant.","NUCLEAR FACTOR Y, SUBUNIT A3 (NF-YA3)","(HAP2C); (ATHAP2C);NUCLEAR FACTOR Y, SUBUNIT A3 (NF-YA3)"]
["AT3G18035","magenta","A linker histone like protein","(HON4)","(HON4)"]
["AT3G46030","magenta","Histone superfamily protein;(source:Araport11)","(HTB11)","(HTB11)"]
["AT4G30630","magenta","hypothetical protein;(source:Araport11)","(INB2A)","(INB2A)"]
["AT1G62310","magenta","Encodes a probable H3K9me2 demethylase. Functions in trichome morphogenesis via regulation of GL3.","(JMJ29)","(JMJ29)"]
["AT5G46560","magenta","Homolog of MAN1, a conserved INM protein found across eukaryotes.","(MAN1)","(MAN1)"]
["AT1G18720","magenta","Contains DUF962 domain. Localizes to ER and can complement yeast Mpo1 dioxygenase function. Interacts with ABI1. May be involved in ER stress response.","(MHP1)","(MHP1)"]
["AT5G24240","magenta","Encodes PI4Kc3, localizes to the nucleus and has autophosphorylation activity, but no lipid kinase activity. Overexpression mutants display late-flowering phenotype.","(AtPI4Kgamma3)","(MOP9.5); (AtPI4Kgamma3)"]
["AT4G11820","magenta","Encodes a protein with hydroxymethylglutaryl-CoA synthase activity which was characterized by phenotypical complementation of the S. cerevisiae mutant. Involved in glucosinolate biosynthesis.","HYDROXYMETHYLGLUTARYL-COA SYNTHASE (HMGS)","(MVA1);HYDROXYMETHYLGLUTARYL-COA SYNTHASE (HMGS);FLAKY POLLEN 1 (FKP1)"]
["AT5G67300","magenta","Member of the R2R3 factor MYB gene family involved in mediating plant responses to a variety of abiotic stimiuli. The mRNA is cell-to-cell mobile.","MYB DOMAIN PROTEIN R1 (MYBR1)","(MYB44); (ATMYBR1);ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 44 (ATMYB44);MYB DOMAIN PROTEIN R1 (MYBR1)"]
["AT5G12980","magenta","Component of the CCR4-NOT complex; acts as negative regulator of phyA-specific light signalling when bound to NOT1, the scaffold protein of the complex. Photoactivated phyA can displace NOT9B from the CCR4-NOT complex.","(NOT9B)","(NOT9B)"]
["AT5G51940","magenta","One of two highly similar proteins that can serve as a non-catalytic subunit of nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB6 and the E. coli RNA polymerase omega subunit. Probably redundant with At2g04630.","(NRPB6A)","(NRPB6A); (NRPE6A); (NRPD6A)"]
["AT3G61050","magenta","Encodes a novel transcriptional regulator, a calcium-dependent lipid-binding protein containing a C2 domain, that binds specifically to the promoter of THAS1 (thalianol synthase 1). It can bind ceramide and is involved in drought and salt tolerance.","(NTMC2T4)","(NTMC2TYPE4); (NTMC2T4);CALCIUM-DEPENDENT LIPID-BINDING PROTEIN (AtCLB);SYNAPTOTAGMIN 7 (SYT7); (CLB1)"]
["AT3G03773","magenta","Encodes one of two isoforms of a co-chaperone of HSP90 that is required for root growth, in particular in the maintenance of the root meristem. It can be phosphorylated in vitro by human and maize CK2.","(P23-2)","(P23-2)"]
["AT3G22640","magenta","cupin family protein;(source:Araport11)","(PAP85)","(PAP85)"]
["AT4G31300","magenta","Encodes 20S proteasome subunit PBA1 (PBA1). PBA1 acts as a plant caspase-3-like enzyme.","(PBA1)","(PBA1)"]
["AT1G55960","magenta","Regulates the synthetic pathway of proline, betaine and the expression of SOS, NCED and CIPK in response to the osmotic stress resistance.","(PCST1)","(PCST1)"]
["AT2G02120","magenta","Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. Mediates ammonium metabolism by regulatingglutamine synthetase activity.","(PDF2.1)","(PDF2.1);LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 70 (LCR70)"]
["AT5G42140","magenta","Member of PRAF/RLD family of proteins. Functions in asymmetric cell division during stomatal development via polar localization of BASL mediated by GN pathway.","(PRAF5)","(PRAF5); (RLD4)"]
["AT4G17530","magenta","AtRabD2c encodes a Rab GTPase, which plays important roles in pollen development, germination and tube elongation.","RAB GTPASE HOMOLOG 1C (RAB1C)","(RAB1C);RAB GTPASE HOMOLOG 1C (ATRAB1C); (ATRABD2C);RAB GTPASE HOMOLOG 1C (RAB1C)"]
["AT3G46920","magenta","kinase superfamily with octicosapeptide/Phox/Bem1p domain-containing protein;(source:Araport11)","(RAF42)","(RAF42)"]
["AT4G10110","magenta","Shows some similarity to RBM7, subunit of NEXT complex.","(RBM7)","(RBM7)"]
["AT1G29950","magenta","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)","(SACL3)","(SACL3)"]
["AT3G62560","magenta","Ras-related small GTP-binding family protein;(source:Araport11)","(SAR1D)","(SAR1D)"]
["AT4G12120","magenta","member of KEULE Gene Family","(SEC1B)","(SEC1B); (ATSEC1B)"]
["AT5G46230","magenta","ABA responsive SVB family gene.","(SVB3)","(SVB3)"]
["AT5G11100","magenta","Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11)","(SYTD)","(SYTD); (ATSYTD);SYNAPTOTAGMIN 4 (SYT4); (NTMC2T2.2); (NTMC2TYPE2.2)"]
["AT5G53970","magenta","Encodes a cytosolic tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment. AtTAT1 prefers Tyr as an amino donor but can also use Phe, Trp, His, Met, and Leu. The mRNA is cell-to-cell mobile.","TYROSINE AMINOTRANSFERASE 7 (TAT7)","(TAT1);TYR AMINOTRANSFERASE 1 (ATTAT1);TYROSINE AMINOTRANSFERASE 7 (TAT7)"]
["AT1G11800","magenta","endonuclease/exonuclease/phosphatase family protein;(source:Araport11)","(TDP2)","(TDP2)"]
["AT1G17810","magenta","beta-tonoplast intrinsic protein (beta-TIP) mRNA, complete","BETA-TONOPLAST INTRINSIC PROTEIN (BETA-TIP)","(TIP3.2);BETA-TONOPLAST INTRINSIC PROTEIN (BETA-TIP); (TIP3;2)"]
["AT1G73190","magenta","Moves to the Protein Storage Vacuole in a Golgi independent manner","(TIP3;1)","(TIP3;1);ALPHA-TONOPLAST INTRINSIC PROTEIN (ALPHA-TIP)"]
["AT1G01480","magenta","a member of the 1-aminocyclopropane-1-carboxylate (ACC) synthase (S-adenosyl-L-methionine methylthioadenosine-lyase, EC 4.4.1.14) gene family, isolated from a flower-specific cDNA library. Plays a key role in the establishment of stomatal density and cluster on the leaf epidermis in response to drought.","1-AMINO-CYCLOPROPANE-1-CARBOXYLATE SYNTHASE 2 (ACS2)","1-AMINO-CYCLOPROPANE-1-CARBOXYLATE SYNTHASE 2 (ACS2); (AT-ACC2)"]
["AT1G48130","magenta","encodes a protein similar to the 1-cysteine (1-Cys) peroxiredoxin family of antioxidants. Expression is limited to seed (aleurone and embryo) and is not induced by ABA or drought.","1-CYSTEINE PEROXIREDOXIN 1 (PER1)","1-CYSTEINE PEROXIREDOXIN 1 (ATPER1);1-CYSTEINE PEROXIREDOXIN 1 (PER1)"]
["AT1G19440","magenta","Encodes KCS4, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","3-KETOACYL-COA SYNTHASE 4 (KCS4)","3-KETOACYL-COA SYNTHASE 4 (KCS4)"]
["AT3G09980","magenta","Encodes ACIP1, a microtubules-associated protein required for bacterial immunity. The mRNA is cell-to-cell mobile.","ACETYLATED INTERACTING PROTEIN 1 (ACIP1)","ACETYLATED INTERACTING PROTEIN 1 (ACIP1)"]
["AT5G65890","magenta","Member of ACT domain containing protein family. ACT domains are amino acid binding domains. Shows strongest expression in flowers and siliques.","ACT DOMAIN REPEAT 1 (ACR1)","ACT DOMAIN REPEAT 1 (ACR1)"]
["AT4G24230","magenta","acyl-CoA-binding protein ACBP3. Localized extracellularly in transiently expressed tobacco BY-2 cells and onion epidermal cells. Binds arachidonyl-CoA with high affinity. Microarray data shows up-regulation of many biotic- and abiotic-stress-related genes in an ACBP3 OE-1 in comparison to wild type.","ACYL-COA-BINDING DOMAIN 3 (ACBP3)","ACYL-COA-BINDING DOMAIN 3 (ACBP3)"]
["AT3G03120","magenta","A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor 1; ARF 1 (GP:385340) {Drosophila melanogaster}, other ARFs and ARF-like proteins.","ADP-RIBOSYLATION FACTOR B1C (ARFB1C)","ADP-RIBOSYLATION FACTOR B1C (ATARFB1C);ADP-RIBOSYLATION FACTOR B1C (ARFB1C)"]
["AT3G57390","magenta","encodes a MADS-box containing protein likely to be a transcription factor that is expressed in endosperm and developing gametophytes. The protein sequence is most similar to that of AGL15, which is expressed in developing embryos.","AGAMOUS-LIKE 18 (AGL18)","AGAMOUS-LIKE 18 (AGL18)"]
["AT1G77950","magenta","Cooperates with the histone mark reader EBS to modulate seed germination under high temperature.","AGAMOUS-LIKE 67 (AGL67)","AGAMOUS-LIKE 67 (AGL67)"]
["AT4G39660","magenta","alanine:glyoxylate aminotransferase 2 homolog (AGT2). The mRNA is cell-to-cell mobile.","ALANINE:GLYOXYLATE AMINOTRANSFERASE 2 (AGT2)","ALANINE:GLYOXYLATE AMINOTRANSFERASE 2 (AGT2)"]
["AT4G20070","magenta","The gene encoding Arabidopsis thaliana Allantoate Amidohydrolase (AtAAH)which catalyzes the allantoate deiminase reaction (EC 3.5.3.9)is expressed in all parts of the plant being consistent with a function in purine turnover in Arabidopsis. The mRNA is cell-to-cell mobile.","ALLANTOATE AMIDOHYDROLASE (AAH)","ALLANTOATE AMIDOHYDROLASE (ATAAH);ALLANTOATE AMIDOHYDROLASE (AAH)"]
["AT3G56450","magenta","member of alpha-SNAP Gene Family","ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 1 (ALPHA-SNAP1)","ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN 1 (ALPHA-SNAP1)"]
["AT1G72570","magenta","Integrase-type DNA-binding superfamily protein;(source:Araport11)","AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR (AIL1)","AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR (AIL1)"]
["AT5G01310","magenta","Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.","APRATAXIN-LIKE (APTX)","APRATAXIN-LIKE (APTX)"]
["AT5G47120","magenta","Encodes BI-1, a homolog of mammalian Bax inhibitor 1. Functions as an attenuator of biotic and abiotic types of cell death. Bax-induced cell death can be downregulated by ectopically expressing AtBI in planta. The mRNA is cell-to-cell mobile.","BAX INHIBITOR 1 (BI1)","ARABIDOPSIS BAX INHIBITOR 1 (ATBI-1);BAX INHIBITOR 1 (BI1);BAX INHIBITOR 1 (ATBI1); (BI-1)"]
["AT2G29525","magenta","Inositol phosphorylceramide synthase","ARABIDOPSIS INOSITOL PHOSPHORYLCERAMIDE SYNTHASE 3 (AtIPCS3)","ARABIDOPSIS INOSITOL PHOSPHORYLCERAMIDE SYNTHASE 3 (AtIPCS3)"]
["AT4G33920","magenta","Protein phosphatase 2C family protein;(source:Araport11)","ARABIDOPSIS PP2C CLADE D 5 (APD5)","ARABIDOPSIS PP2C CLADE D 5 (APD5)"]
["AT1G49300","magenta","encodes a small GTPase involved in membrane trafficking. Gene expression is induced by hydrogen peroxide and lines. Lines overexpressing the gene are more tolerant to high salt and hyperosmotic conditions.","RAB GTPASE HOMOLOG G3E (RABG3E)","ARABIDOPSIS RAB GTPASE HOMOLOG 7 (ATRAB7);ARABIDOPSIS RAB GTPASE HOMOLOG G3E (ATRABG3E);RAB GTPASE HOMOLOG G3E (RABG3E)"]
["AT5G42190","magenta","Similar to SKP1 in yeast and humans which are involved in mitotic cell cycle control and ubiquitin mediated proteolysis.","(SKP1B)","ARABIDOPSIS SKP1-LIKE 2 (ASK2); (SKP1B);ARABIDOPSIS SKP-LIKE 2 (ASK2)"]
["AT2G28130","magenta","Contains CANIN domain.Corresponds to either the NSE5 or NSE6 subunit of the SMC5/6 complex.","ARABIDOPSIS SNI1 ASSOCIATED PROTEIN 1 (ASAP1)","ARABIDOPSIS SNI1 ASSOCIATED PROTEIN 1 (ASAP1);NON-SMC ELEMENT 6 (NSE6)"]
["AT5G43600","magenta","Encodes a protein with ureidoglycolate amidohydrolase activity in vitro. It is 27% identical and 43% similar to the E. coli allantoate amidohydrolase (AAH), but, in vitro assays with purified protein and allantoate as a substrate do not show any increase in ammonium concentration, indicating that there this enzyme has no AAH activity. The mRNA is cell-to-cell mobile.","UREIDOGLYCOLATE AMIDOHYDROLASE (UAH)","ARABIDOPSIS THALIANA ALLANTOATE AMIDOHYDROLASE 2 (ATAAH-2);UREIDOGLYCOLATE AMIDOHYDROLASE (UAH)"]
["AT5G43860","magenta","Encodes a chlorophyllase, the first enzyme in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to chlorophyllide and phytol. AtCLH2 has a typical signal sequence for the chloroplast. Gene expression does not respond to methyljasmonate, a known promoter of senescence and chlorophyll degradation.","CHLOROPHYLLASE 2 (CLH2)","ARABIDOPSIS THALIANA CHLOROPHYLLASE 2 (ATCLH2);CHLOROPHYLLASE 2 (CLH2)"]
["AT1G65520","magenta","encodes a peroxisomal delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation","DELTA(3), DELTA(2)-ENOYL COA ISOMERASE 1 (ECI1)","ARABIDOPSIS THALIANA DELTA(3), DELTA(2)-ENOYL COA ISOMERASE 1 (ATECI1);DELTA(3), DELTA(2)-ENOYL COA ISOMERASE 1 (ECI1);ENOYL-COA HYDRATASE/ISOMERASE C (ECHIC); (PEC11)"]
["AT4G26740","magenta","Encodes caleosin, a 27-kDa protein found within seed lipid bodies. Gene is expressed preferentially in the embryo, has similarity to a rice ABA-responsive gene, EFA27. Catalyze hydroperoxide-dependent mono-oxygenation reactions. Require calcium for peroxygenase activity. Probably deeply buried in lipid droplets or microsomes.","SEED GENE 1 (ATS1)","ARABIDOPSIS THALIANA PEROXYGENASE 1 (ATPXG1); (ATCLO1);CALEOSIN1 (CLO1);SEED GENE 1 (ATS1)"]
["AT1G79230","magenta","encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification.","MERCAPTOPYRUVATE SULFURTRANSFERASE 1 (MST1)","ARABIDOPSIS THALIANA RHODANESE HOMOLOGUE 1 (ATRDH1);SULFURTRANSFERASE 1 (ST1); (ATMST1);MERCAPTOPYRUVATE SULFURTRANSFERASE 1 (MST1); (STR1)"]
["AT3G62690","magenta","Encodes a RING-H2 zinc finger protein related to ATL2. The ATL gene family is represented by fifteen sequences that contain, in addition to the RING, a transmembrane domain which is located in most of them towards the N-terminal end. Involved in seed longevity.","ARABIDOPSIS TOXICOS EN LEVADURA 5 (ATL5)","ARABIDOPSIS TOXICOS EN LEVADURA 5 (ATL5)"]
["AT4G09030","magenta","Encodes arabinogalactan protein (AGP10). The mRNA is cell-to-cell mobile.","ARABINOGALACTAN PROTEIN 10 (AGP10)","ARABINOGALACTAN PROTEIN 10 (AGP10); (ATAGP10)"]
["AT3G26380","magenta","APSE is a member of the Glycoside Hydrolase (GH27) family that functions as a &#946;-l-arabinopyranosidase.","ARAPASE (APSE)","ARAPASE (APSE)"]
["AT5G05700","magenta","Encodes an arginyl-tRNA:protein transferase (ATE1), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. Mutants of ATE1 also display delayed leaf senescence and altered responses to pathogens.","ARGININE-TRNA PROTEIN TRANSFERASE 1 (ATE1)","ARGININE-TRNA PROTEIN TRANSFERASE 1 (ATE1); (ATATE1);DELAYED LEAF SENESCENCE 1 (DLS1)"]
["AT1G48410","magenta","Encodes an RNA Slicer that selectively recruits microRNAs and siRNAs. There is currently no evidence that AGO1 Slicer is in a high molecular weight RNA-induced silencing complex (RISC). Mutants are defective in post-transcriptional gene silencing and have pleiotropic developmental and morphological defects. Through its action on the regulation of ARF17 expression, the protein regulates genes involved at the cross talk between auxin and light signaling during adventitious root development. AGO1 seems to be targeted for degradation by silencing suppressor F-box-containing proteins from Turnip yellow virus and Cucurbit aphid-borne yellow virus.","ARGONAUTE 1 (AGO1)","ARGONAUTE 1 (AGO1); (ICU9); (ATAGO1)"]
["AT3G11900","magenta","encodes an amino acid transporter that transports aromatic and neutral amino acids, IAA, and 2,4-D. Expressed in all tissues with highest abundance in flowers and cauline leaves. a member of a small gene family in Arabidopsis and represents a new class of amino acid transporters.","AROMATIC AND NEUTRAL TRANSPORTER 1 (ANT1)","AROMATIC AND NEUTRAL TRANSPORTER 1 (ANT1)"]
["AT4G22770","magenta","AT hook motif DNA-binding family protein;(source:Araport11)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 2 (AHL2)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 2 (AHL2)"]
["AT5G62260","magenta","AT hook motif DNA-binding family protein;(source:Araport11)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 6 (AHL6)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 6 (AHL6)"]
["AT4G35390","magenta","AT-hook protein of GA feedback 1;(source:Araport11)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 25 (AHL25)","AT-HOOK PROTEIN OF GA FEEDBACK 1 (AGF1);AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 25 (AHL25)"]
["AT5G45900","magenta","Component of autophagy conjugation pathway. Required for proper senescence. Contributes to plant basal immunity towards fungal infection.","AUTOPHAGY 7 (APG7)","AUTOPHAGY 7 (APG7); (ATAPG7);PEROXISOME UNUSUAL POSITIONING 4 (PEUP4); (ATATG7);AUTOPHAGY-RELATED 7 (ATG7)"]
["AT2G45170","magenta","Involved in autophagy. Under nutrient starvation the protein localizes to autophagosomes. Involved in submergence (hypoxia) tolerance; ethanol induces autophagy.","AUTOPHAGY 8E (ATG8E)","AUTOPHAGY 8E (ATATG8E);AUTOPHAGY 8E (ATG8E)"]
["AT2G31260","magenta","Involved in autophagy, the process of vacuolar bulk degradation of cytoplasmic components. Mutant shows accelerated bolting and senescence. Potential heat-priming associated target of ATAF1.","AUTOPHAGY 9 (APG9)","AUTOPHAGY 9 (APG9); (ATAPG9);AUTOPHAGY 9 (ATG9)"]
["AT5G66930","magenta","meiotically up-regulated protein;(source:Araport11)","AUTOPHAGY-RELATED 101 (ATG101)","AUTOPHAGY-RELATED 101 (ATG101)"]
["AT4G21980","magenta","Encodes APG8, a component of autophagy conjugation pathway. Delivered to the lumens of vacuole under nitrogen-starvation condition. Highest expression in flowers. mRNA abundance increased during dark-induced carbon starvation. Predominantly cytoplasmic with or without N starvation. Upon concanamycin A the protein accumulates in the central vacuole as punctuate structures that resemble autophagic bodies. This localization is more abundant upon N starvation. The mRNA is cell-to-cell mobile.","AUTOPHAGY 8A (APG8A)","AUTOPHAGY-RELATED 8A (ATG8A);AUTOPHAGY 8A (APG8A)"]
["AT3G53930","magenta","ATG1a homologous protein which interacts with TOPP4.","AUTOPHAGY-RELATED PROTEIN 1B (ATG1B)","AUTOPHAGY-RELATED PROTEIN 1B (ATG1B)"]
["AT2G28350","magenta","Involved in root cap cell differentiation.","AUXIN RESPONSE FACTOR 10 (ARF10)","AUXIN RESPONSE FACTOR 10 (ARF10)"]
["AT5G54680","magenta","bHLH IVc transcription factor which facilitates the nuclear accumulation of bHLH11.","IAA-LEUCINE RESISTANT3 (ILR3)","BASIC HELIX-LOOP-HELIX 105 (bHLH105);IAA-LEUCINE RESISTANT3 (ILR3)"]
["AT1G27850","magenta","Encodes a microtubule-associated protein involved in cortical microtubule organization during leaf development.","BASIC PROLINE-RICH PROTEIN5 (BPP5)","BASIC PROLINE-RICH PROTEIN5 (BPP5)"]
["AT2G27990","magenta","Encodes a BEL1-like homeobox gene that functions together with PNY in meristem maintenance by regulating the allocation process during vegetative and reproductive development. Both gene products are required for the competence of the SAM to respond properly to floral inductive signals.","BEL1-LIKE HOMEODOMAIN 8 (BLH8)","BEL1-LIKE HOMEODOMAIN 8 (BLH8);POUND-FOOLISH (PNF)"]
["AT1G02860","magenta","Encodes a ubiquitin E3 ligase with RING and SPX domains that is involved in mediating immune responses and mediates degradation of PHT1s at plasma membranes. Targeted by MIR827. Ubiquitinates PHT1;3, PHT1;2, PHT1;1/AtPT1 and PHT1;4/AtPT2.","NITROGEN LIMITATION ADAPTATION (NLA)","BENZOIC ACID HYPERSENSITIVE 1 (BAH1);NITROGEN LIMITATION ADAPTATION (NLA); (SYG1)"]
["AT1G02850","magenta","beta glucosidase 11;(source:Araport11)","BETA GLUCOSIDASE 11 (BGLU11)","BETA GLUCOSIDASE 11 (BGLU11)"]
["AT4G22100","magenta","beta glucosidase 2;(source:Araport11)","BETA GLUCOSIDASE 2 (BGLU3)","BETA GLUCOSIDASE 2 (BGLU3)"]
["AT5G18670","magenta","putative beta-amylase BMY3 (BMY3)","BETA-AMYLASE 3 (BMY3)","BETA-AMYLASE 9 (BAM9);BETA-AMYLASE 3 (BMY3)"]
["AT3G55260","magenta","Encodes a protein with &#946;-hexosaminidase activity (the enzyme is active with p-nitrophenyl-&#946;-N-acetylglucosaminide as substrate but displayed only a minor activity toward p-nitrophenyl-&#946;-N-acetylgalactosaminide). The enzyme displays no distinct preference for a specific terminal GlcNAc residue and indeed cleaved the asialoagalactodabsylglycopeptide GnGn to a mixture of products.","BETA-HEXOSAMINIDASE 1 (HEXO1)","BETA-HEXOSAMINIDASE 1 (HEXO1); (ATHEX2)"]
["AT5G17510","magenta","Identified as a specific subunit of BRM-associated SWI/SNF (BAS) complexes (PMID:36471048).","BRAHMA-INTERACTING PROTEIN 2 (BRIP2)","BRAHMA-INTERACTING PROTEIN 2 (BRIP2)"]
["AT3G13380","magenta","Similar to BRI, brassinosteroid receptor protein.","BRI1-LIKE 3 (BRL3)","BRI1-LIKE 3 (BRL3)"]
["AT1G01550","magenta","Encodes a protein with no functionally characterized domains that to prevent the synthesis of a novel substance that moves from the root to the shoot, where it modifies shoot growth by interfering with auxin signaling. Synthesis and delivery of this substance requires neither phloem nor endodermis.","BYPASS 1 (BPS1)","BYPASS 1 (BPS1)"]
["AT5G58940","magenta","Arabidopsis thaliana calmodulin-binding receptor-like kinase mRNA The mRNA is cell-to-cell mobile.","CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1 (CRCK1)","CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1 (CRCK1)"]
["AT2G11520","magenta","high overall homology to CRCK1","CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 3 (CRCK3)","CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 3 (CRCK3)"]
["AT2G23080","magenta","Protein kinase superfamily protein;(source:Araport11)","CASEIN KINASE II, ALPHA CHAIN 3 (CKA3)","CASEIN KINASE II, ALPHA CHAIN 3 (CKA3)"]
["AT2G36330","magenta","Uncharacterized protein family (UPF0497);(source:Araport11)","CASP-LIKE PROTEIN 4A3 (CASPL4A3)","CASP-LIKE PROTEIN 4A3 (CASPL4A3)"]
["AT1G20630","magenta","Catalyzes the reduction of hydrogen peroxide using heme group as cofactor. Protects cells from toxicity by H2O2.","CATALASE 1 (CAT1)","CATALASE 1 (CAT1)"]
["AT3G14070","magenta","Involved in cation (K, Na and Mn) homeostasis and transport","CATION EXCHANGER 9 (CAX9)","CATION EXCHANGER 9 (CAX9);CATION CALCIUM EXCHANGER 3 (CCX3);CATION CALCIUM EXCHANGER 3 (ATCCX3)"]
["AT4G39350","magenta","Encodes a cellulose synthase isomer, related to CESA6. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. The mRNA is cell-to-cell mobile.","CELLULOSE SYNTHASE A2 (CESA2)","CELLULOSE SYNTHASE A2 (CESA2); (ATH-A); (ATCESA2)"]
["AT4G31590","magenta","encodes a XyG glucan synthase; gene similar to cellulose synthase","CELLULOSE-SYNTHASE-LIKE C5 (CSLC5)","CELLULOSE-SYNTHASE LIKE C5 (ATCSLC05);CELLULOSE-SYNTHASE LIKE C5 (CSLC05);CELLULOSE-SYNTHASE-LIKE C5 (ATCSLC5);CELLULOSE-SYNTHASE-LIKE C5 (CSLC5)"]
["AT3G50360","magenta","CAM like protein with four EF-hand domains. Binds calcium. Loss of function mutants affect ABA regulation of guard cell channels and accumulation of stress responsive transcripts(PMID:28603528).","CENTRIN2 (CEN2)","CENTRIN 1 (CEN1);CENTRIN2 (ATCEN2);CENTRIN2 (CEN2);CALMODULIN20 (CML20)"]
["AT3G60680","magenta","DUF641 family protein (DUF641);(source:Araport11)","CHIQUITA1-LIKE 9 (CHIQL9)","CHIQUITA1-LIKE 9 (CHIQL9)"]
["AT5G26240","magenta","Anion channel protein family member. Involved in negative regulation of pattern triggered immunity.","CHLORIDE CHANNEL D (CLC-D)","CHLORIDE CHANNEL D (CLC-D); (ATCLCD);CHLORIDE CHANNEL D (CLCD); (ATCLC-D)"]
["AT5G25560","magenta","CHY-type/CTCHY-type/RING-type Zinc finger protein;(source:Araport11)","CHY ZINC FINGER AND RING PROTEIN 2 (CHYR2)","CHY ZINC FINGER AND RING PROTEIN 2 (CHYR2)"]
["AT1G15950","magenta","Encodes a cinnamoyl CoA reductase. Involved in lignin biosynthesis. The mRNA is cell-to-cell mobile.","CINNAMOYL COA REDUCTASE 1 (CCR1)","CINNAMOYL COA REDUCTASE 1 (CCR1); (ATCCR1);IRREGULAR XYLEM 4 (IRX4)"]
["AT5G12170","magenta","Encodes one of the CRT-Like transporters (CLT1/AT5G19380, CLT2/AT4G24460, CLT3/AT5G12170). Required for glutathione homeostasis and stress responses. Mutants lacking these transporters are heavy metal-sensitive, glutathione(GSH)-deficient, and hypersensitive to Phytophthora infection. The mRNA is cell-to-cell mobile.","CRT (CHLOROQUINE-RESISTANCE TRANSPORTER)-LIKE TRANSPORTER 3 (CLT3)","CRT (CHLOROQUINE-RESISTANCE TRANSPORTER)-LIKE TRANSPORTER 3 (CLT3)"]
["AT1G03880","magenta","Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","CRUCIFERIN 2 (CRU2)","CRUCIFERIN 2 (CRU2);CRUCIFERIN B (CRB)"]
["AT4G28520","magenta","Encodes a 12S seed storage protein that is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","CRUCIFERIN 3 (CRU3)","CRUCIFERIN 3 (CRU3);CRUCIFERIN C (CRC)"]
["AT5G44120","magenta","Encodes a 12S seed storage protein. The Landsberg erecta genome contains another copy of 12S globulin gene, CRA2, which is located tandemly with CRA1. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","CRUCIFERINA (CRA1)","CRUCIFERINA (CRA1); (CRU1);CRUCIFERINA (ATCRA1)"]
["AT5G58003","magenta","Encodes a polypeptide that contains FCPH and BRCT domains. RNAi suppression mutant lines were generated, which displayed a range of phenotypic abnormalities, including: incomplete to no cotyledon expansion, slow growth, epinastic leaves or small inflorescences.","C-TERMINAL DOMAIN PHOSPHATASE-LIKE 4 (CPL4)","C-TERMINAL DOMAIN PHOSPHATASE-LIKE 4 (CPL4); (FCP1)"]
["AT4G15393","magenta","a member of the cytochrome P450 gene family. molecular function unknown.","CYTOCHROME P450, FAMILY 702, SUBFAMILY A, POLYPEPTIDE 5 (CYP702A5)","CYTOCHROME P450, FAMILY 702, SUBFAMILY A, POLYPEPTIDE 5 (CYP702A5)"]
["AT4G15396","magenta","cytochrome P450, family 702, subfamily A, polypeptide 6;(source:Araport11)","CYTOCHROME P450, FAMILY 702, SUBFAMILY A, POLYPEPTIDE 6 (CYP702A6)","CYTOCHROME P450, FAMILY 702, SUBFAMILY A, POLYPEPTIDE 6 (CYP702A6)"]
["AT3G18270","magenta","a cytochrome P450 pseudogene. the second half of the gene overlaps perfectly with the other gene model.","CYTOCHROME P450, FAMILY 77, SUBFAMILY A, POLYPEPTIDE 5 PSEUDOGENE (CYP77A5P)","CYTOCHROME P450, FAMILY 77, SUBFAMILY A, POLYPEPTIDE 5 PSEUDOGENE (CYP77A5P)"]
["AT3G10570","magenta","member of CYP77A","CYTOCHROME P450, FAMILY 77, SUBFAMILY A, POLYPEPTIDE 6 (CYP77A6)","CYTOCHROME P450, FAMILY 77, SUBFAMILY A, POLYPEPTIDE 6 (CYP77A6)"]
["AT2G40890","magenta","encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis and flavonoid biosynthesis. Also affects the biosynthesis of coumarins such as scopoletin and scopolin as a branching-out-pathway from the phenylpropanoid acid level.","CYTOCHROME P450, FAMILY 98, SUBFAMILY A, POLYPEPTIDE 3 (CYP98A3)","CYTOCHROME P450, FAMILY 98, SUBFAMILY A, POLYPEPTIDE 3 (CYP98A3);REDUCED EPIDERMAL FLUORESCENCE 8 (REF8)"]
["AT5G56970","magenta","It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.Acts on N6-(2-isopentenyl)adenine 9-riboside.","CYTOKININ OXIDASE 3 (CKX3)","CYTOKININ OXIDASE 3 (CKX3); (ATCKX3)"]
["AT1G48210","magenta","Plays role in abscisic acid (ABA)-dependent pathway in response to dehydration; forms homo- or heterodimers in a kinase active dependent manner.","CYTOSOLIC ABA RECEPTOR KINASE 11 (CARK11)","CYTOSOLIC ABA RECEPTOR KINASE 11 (CARK11)"]
["AT1G17100","magenta","Encodes a cytosolic heme binding protein(cHBP)that can reversibly bind tetrapyrroles including heme, protoporphyrin IX and Mg-protoporphyrin IX dimethyl ester with distinct binding af&#64257;nities.","HAEM-BINDING PROTEIN 1 (HBP1)","CYTOSOLIC HEME (TETRAPYRROLE) BINDING PROTEIN 1 (CHBP1); (SOUL1); (ATHBP1);HAEM-BINDING PROTEIN 1 (HBP1)"]
["AT2G38630","magenta","WD40 repeat-like protein which interacts in the nucleus with the N-terminus of FBS proteins.","D FBS INTERACTING PROTEIN 2 (FBIP2)","D FBS INTERACTING PROTEIN 2 (FBIP2)"]
["AT4G26630","magenta","Encodes a chromatin-associated protein that specifically binds histones H3 and H4 and contributes to modulation of Arabidopsis chromatin structure and function.","DEK-DOMAIN CONTAINING PROTEIN 3 (DEK3)","DEK-DOMAIN CONTAINING PROTEIN 3 (DEK3)"]
["AT2G36490","magenta","A repressor of transcriptional gene silencing. Functions by demethylating the target promoter DNA. Interacts physically with RPA2/ROR1. In the ros1 mutants, an increase in methylation is observed in a number of gene promoters. Among the loci affected by ros1, a few (RD29A and At1g76930) are affected in cytosine methylation in all sequence contexts (CpG, CpNpG or CpNpN), although many others are affected primarily in non-CpG contexts. The ros1 mutant is more susceptible to biotrophic pathogens and is repressed in its responsiveness of salyclic acid-dependent defence genes.","DEMETER-LIKE 1 (DML1)","DEMETER-LIKE 1 (DML1);REPRESSOR OF SILENCING1 (ROS1); (ATROS1)"]
["AT5G41560","magenta","Encodes a substrate receptor for CRL4-CDD complexes that provides substrate specificity for CRL4 by interacting with ubiquitination targets. By its interaction and regulation of levels of PYL8 through proteasomal degradation, it negatively regulates ABA-mediated developmental responses, including inhibition of seed germination, seedling establishment, and root growth","DET1-, DDB1-ASSOCIATED 1 (DDA1)","DET1-, DDB1-ASSOCIATED 1 (DDA1)"]
["AT5G48950","magenta","Encodes one of the two functional DHNA-CoA (1,4-dihydroxy-2-naphthoyl-CoA) thioesterases found in Arabidopsis.","DHNA-COA THIOESTERASE 2 (DHNAT2)","DHNA-COA THIOESTERASE 2 (DHNAT2)"]
["AT1G27980","magenta","Encodes an ER-localized sphingoid long-chain base-1-phosphate lyase involved in the dehydration stress response.","DIHYDROSPHINGOSINE PHOSPHATE LYASE (DPL1)","DIHYDROSPHINGOSINE PHOSPHATE LYASE (DPL1); (ATDPL1)"]
["AT5G12430","magenta","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","TETRATRICOPEPTIDE REPEAT 16 (TPR16)","DNA J PROTEIN C31 (DJC31);TETRATRICOPEPTIDE REPEAT 16 (TPR16)"]
["AT4G18650","magenta","A maternally expressed imprinted gene in the endosperm. It's expression is positively regulated by ROS1.","DOG1-LIKE 4 (DOGL4)","DOG1-LIKE 4 (DOGL4)"]
["AT1G20575","magenta","Encodes the catalytic core of the dolichol phosphate mannase synthase (DPMS) complex. It is not active on its own but requires the presence of DPMS2 and DPMS3 for full activity. It is localized in the ER and mediates isoprenyl-linked glycan biogenesis, in&#64258;uences development, stress response, and ammonium hypersensitivity.","DOLICHOL PHOSPHATE MANNOSE SYNTHASE 1 (DPMS1)","DOLICHOL PHOSPHATE MANNOSE SYNTHASE 1 (DPMS1)"]
["AT4G22140","magenta","Encoding a chromatin remodeling factor that regulates flowering time.","EARLY BOLTING IN SHORT DAYS (EBS)","EARLY BOLTING IN SHORT DAYS (EBS)"]
["AT2G24860","magenta","Loss-of-function mutant of EIJ1 presents normal growth, but a stronger resistance to Pst DC3000 compared with the wild type.","EDS1 -INTERACTING J PROTEIN 1 (EIJ1)","EDS1 -INTERACTING J PROTEIN 1 (EIJ1)"]
["AT2G43400","magenta","Encodes a unique electron-transfer flavoprotein:ubiquinone oxidoreductase that is localized to the mitochondrion. Mutants are more sensitive to sugar starvation when plants are kept in the dark for long periods.","ELECTRON-TRANSFER FLAVOPROTEIN:UBIQUINONE OXIDOREDUCTASE (ETFQO)","ELECTRON-TRANSFER FLAVOPROTEIN:UBIQUINONE OXIDOREDUCTASE (ETFQO)"]
["AT5G62200","magenta","Embryo-specific protein 3, (ATS3);(source:Araport11)","EMBRYO-SPECIFIC PROTEIN 3B (ATS3B)","EMBRYO-SPECIFIC PROTEIN 3B (ATS3B)"]
["AT4G28320","magenta","Encodes a endo-beta-mannanase which is akey factor involved in cyanide-promoted seed germination.","ENDO-BETA-MANNASE 5 (MAN5)","ENDO-BETA-MANNASE 5 (MAN5); (AtMAN5)"]
["AT1G29330","magenta","Encodes a protein similar in sequence to animal and yeast endoplasmic reticulum retention signal receptor. This protein can functionally complement the yeast homologue. Transcript is detected in flower buds, stems, root, and leaves.","ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2 (ERD2)","ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2 (ERD2);ARABIDOPSIS ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2 (AERD2);ARABIDOPSIS THALIANA ENDOPLASMIC RETICULUM RETENTION DEFECTIVE 2 (ATERD2)"]
["AT1G03620","magenta","Can interfere with MCR and ELMOD_A activities, changing aperture morphology and producing new aperture patterns of developing pollen grains.","ENGULFMENT AND CELL MOTILITY (ELMO) DOMAIN E (ELMOD_E)","ENGULFMENT AND CELL MOTILITY (ELMO) DOMAIN E (ELMOD_E);ENGULFMENT AND CELL MOTILITY (ELMO) DOMAIN F (ELMOD_F)"]
["AT4G02680","magenta","Encodes a paralog of ETO1, which is a negative regulator of ACS5 (a key enzyme in ethylene biosynthesis pathway). EOL1 also interacts with and inhibits the activity of ACS5.","ETO1-LIKE 1 (EOL1)","ETO1-LIKE 1 (EOL1)"]
["AT3G60240","magenta","protein synthesis initiation factor 4G (EIF4G). A mutation in this gene (cum2-1) results in decreased accumulation of CMV coat protein in upper, uninoculated leaves. Likely affects cell-to-cell movement of the virus, also affects TCV multiplication.","EUKARYOTIC TRANSLATION INITIATION FACTOR 4G (EIF4G)","EUKARYOTIC TRANSLATION INITIATION FACTOR 4G (EIF4G);CUCUMOVIRUS MULTIPLICATION 2 (CUM2)"]
["AT5G58190","magenta","evolutionarily conserved C-terminal region 10;(source:Araport11)","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 10 (ECT10)","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 10 (ECT10)"]
["AT1G47550","magenta","Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion. It binds phosphoinositide lipids.","EXOCYST COMPLEX COMPONENT SEC3A (SEC3A)","EXOCYST COMPLEX COMPONENT SEC3A (SEC3A)"]
["AT3G45970","magenta","member of EXPANSIN-LIKE. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) The mRNA is cell-to-cell mobile.","EXPANSIN-LIKE A1 (EXLA1)","EXPANSIN-LIKE A1 (EXLA1);EXPANSIN-LIKE A1 (ATEXLA1);EXPANSIN L1 (EXPL1); (ATHEXP BETA 2.1); (ATEXPL1)"]
["AT1G76320","magenta","FAR1-related sequence 4;(source:Araport11)","FAR1-RELATED SEQUENCE 4 (FRS4)","FAR1-RELATED SEQUENCE 4 (FRS4);CHLOROPLAST DIVISION MUTANT 25 (CPD25)"]
["AT1G12140","magenta","Encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates. It is a suppressor of the bp mutant phenotype.","FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 5 (FMO GS-OX5)","FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 5 (FMO GS-OX5)"]
["AT2G41705","magenta","Encodes a fluoride export protein.","FLUORIDE EXPORT PROTEIN (FEX)","FLUORIDE EXPORT PROTEIN (FEX)"]
["AT3G02400","magenta","Contains a single exon and encodes a ~66-kD protein with a Forkhead- Associated domain. Binds the promoter of PEX11b and expression is correlated with negative regulation of PEX11b.","FORKHEADASSOCIATED DOMAIN 2 (FHA3)","FORKHEADASSOCIATED DOMAIN 2 (FHA3);BOREALIN RELATED INTERACTOR 1 (BORI1)"]
["AT1G70140","magenta","Encodes a group I formin. Binds to F-actin barbed ends. Has severing actin filaments activity. Binds profilin. Involved in the initiation and tip growth of root hairs through regulation of actin cytoskeleton.","FORMIN 8 (FH8)","FORMIN 8 (ATFH8);FORMIN 8 (FH8);FORMIN HOMOLOGUE 8 (FORMIN 8)"]
["AT3G26790","magenta","Transcriptional factor with high similarity to the B3 region of the VP1/ABI3-like proteins. Full length FUS3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of FUS3 requires the B3 DNA-binding domain and an activation domain. FUS3 specifies cotyledon identity. Regulator of gene expression during late embryogenesis. Involved in the control foliar organ identity in Arabidopsis by regulating the synthesis of two hormones, abscisic acid and gibberellin. FUS3 together with LEC1 positively regulate the abundance of the ABI3 protein in the seed.","FUSCA3 (FUS3)","FUSCA3 (FUS3)"]
["AT2G33570","magenta","glycosyltransferase family protein (DUF23);(source:Araport11)","GALACTAN SYNTHASE 1 (GALS1)","GALACTAN SYNTHASE 1 (GALS1)"]
["AT2G25650","magenta","DNA-binding storekeeper protein-related transcriptional regulator;(source:Araport11)","GEBP-LIKE PROTEIN 1 (GPL1)","GEBP-LIKE PROTEIN 1 (GPL1)"]
["AT5G58660","magenta","Encodes a class III gibberellin 2-oxidase that oxidizes GA12 to GA110 and GA9 to GA40.","GIBBERELLIN 2-OXIDASE 9 (GA2OX9)","GIBBERELLIN 2-OXIDASE 9 (GA2OX9)"]
["AT5G13420","magenta","Transaldolase which contributes to reactive oxygen species homeostasis in response to Glc during early seedling growth.","TRANSALDOLASE 2 (TRA2)","GLC-HYPERSENSITIVE MUTANT 2 (GSM2);TRANSALDOLASE 2 (TRA2)"]
["AT3G05545","magenta","RING/U-box superfamily protein that impacts on auxin signaling output.","GLOOMY AND SHINY PILS 1 (GASP1)","GLOOMY AND SHINY PILS 1 (GASP1)"]
["AT5G54800","magenta","Encodes glucose6-Phosphate/phosphate transporter 1. Essential for pollen maturation and embryo sac development. The mRNA is cell-to-cell mobile.","GLUCOSE 6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 1 (GPT1)","GLUCOSE 6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 1 (GPT1);GROWING PLUS-END TRACKING 1 (GPT1);ARABIDOPSIS GLUCOSE 6-PHOSPHATE/PHOSPHATE TRANSLOCATOR 1 (ATGPT1)"]
["AT5G07830","magenta","Belongs to the plant glycoside hydrolase family 79. Encodes a protein with several posttranslational modification sites including O-&#946;-GlcNAc attachment sites and serine-, threonine- and tyrosine-phosphorylation sites, suggesting that this protein is extensively modified posttranslationally. The protein is predicted (WoLF PSORT program) to be membrane-associated. It is involved in cell elongation. The mRNA is cell-to-cell mobile.","GLUCURONIDASE 2 (GUS2)","GLUCURONIDASE 2 (GUS2);GLUCURONIDASE 2 (AtGUS2)"]
["AT1G48470","magenta","Encodes cytosolic glutamine synthase isozyme. Expression of mRNA is not detectable in roots.","GLUTAMINE SYNTHETASE 1;5 (GLN1;5)","GLUTAMINE SYNTHETASE 1;5 (GLN1;5)"]
["AT1G59700","magenta","Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). The mRNA is cell-to-cell mobile.","GLUTATHIONE S-TRANSFERASE TAU 16 (GSTU16)","GLUTATHIONE S-TRANSFERASE TAU 16 (ATGSTU16);GLUTATHIONE S-TRANSFERASE TAU 16 (GSTU16)"]
["AT5G41240","magenta","Encodes glutathione transferase belonging to the theta class of GSTs. Naming convention according to Wagner et al. (2002).","GLUTATHIONE S-TRANSFERASE THETA 2 (GSTT2)","GLUTATHIONE S-TRANSFERASE THETA 2 (ATGSTT2);GLUTATHIONE S-TRANSFERASE THETA 2 (GSTT2); (GST10B)"]
["AT1G06520","magenta","sn-glycerol-3-phosphate 2-O-acyltransferase. Expressed in flower buds and siliques. Homozygous mutant plants are male sterile.","GLYCEROL-3-PHOSPHATE SN-2-ACYLTRANSFERASE 1 (GPAT1)","GLYCEROL-3-PHOSPHATE SN-2-ACYLTRANSFERASE 1 (ATGPAT1);GLYCEROL-3-PHOSPHATE SN-2-ACYLTRANSFERASE 1 (GPAT1);GLYCEROL-3-PHOSPHATE SN-2-ACYLTRANSFERASE 1 (SN-2-GPAT1)"]
["AT3G47950","magenta","mutant has Slight reduction in root and shoot growth; Exaggerated defects in salt stress; Plasma Membrane H+ ATPase","H(+)-ATPASE 4 (HA4)","H(+)-ATPASE 4 (AHA4);H(+)-ATPASE 4 (HA4)"]
["AT3G46290","magenta","Encodes HERCULES1 (HERK1), a receptor kinase regulated by brassinosteroids and required for cell elongation during vegetative growth. Along with ANJ functions as the female (embryo sac) determinant of pollen tube guidance.","HERCULES RECEPTOR KINASE 1 (HERK1)","HERCULES RECEPTOR KINASE 1 (HERK1)"]
["AT5G63620","magenta","Encodes an oxidoreductase involved in transducing the perception of E-2-hexenal, which changes the redox status of the mitochondria.","HEXENAL RESPONSE 2 (HER2)","HEXENAL RESPONSE 2 (HER2)"]
["AT4G14910","magenta","Encodes a protein that is predicted to act as a imidazoleglycerol-phosphate dehydratase involved in histidine biosynthesis","HISTIDINE BIOSYNTHESIS 5B (HISN5B)","HISTIDINE BIOSYNTHESIS 5B (HISN5B)"]
["AT5G50600","magenta","Encodes a hydroxysteroid dehydrogenase shown to act as a NADP+-dependent 11&beta;-,17&beta;-hydroxysteroid dehydrogenase/17&beta;-ketosteroid reductase called HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination. To date, the endogenous substrates of this enzyme are not known.","HYDROXYSTEROID DEHYDROGENASE 1 (HSD1)","HYDROXYSTEROID DEHYDROGENASE 1 (AtHSD1);HYDROXYSTEROID DEHYDROGENASE 1 (HSD1)"]
["AT5G50700","magenta","Encodes a hydroxysteroid dehydrogenase HSD1. Two copies of HSD1 (At5g50600 and At5g50700) exist in the Arabidopsis genome as a result of an exact 33-kb duplication on chromosome 5 encompassing seven genes. There are five homologs of HSD1 in Arabidopsis (HSD2-At3g47350, HSD3-At3g47360, HSD4-At5g50590, HSD4-At5g50690 and HSD6-At5g50770; HSD4 has two copies due to the same gene duplication event occurred to HSD1) (Plant Cell Physiology 50:1463). At5g50690 is also named as HSD7 (Plant Physiology 145:87). HSD1 is identified from the proteome of oil bodies from mature seeds. Transcription of HSD1 is specifically and highly induced in oil-accumulating tissues of mature seeds; transcript disappears during germination.","HYDROXYSTEROID DEHYDROGENASE 1 (HSD1)","HYDROXYSTEROID DEHYDROGENASE 1 (HSD1)"]
["AT4G10020","magenta","Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.","HYDROXYSTEROID DEHYDROGENASE 5 (HSD5)","HYDROXYSTEROID DEHYDROGENASE 5 (AtHSD5);HYDROXYSTEROID DEHYDROGENASE 5 (HSD5)"]
["AT5G27760","magenta","Hypoxia-responsive family protein;(source:Araport11)","HYPOXIA-INDUCED GENE DOMAIN 2 (ATHIGD2)","HYPOXIA-INDUCED GENE DOMAIN 2 (ATHIGD2)"]
["AT3G02875","magenta","Hydrolyzes amino acid conjugates of the plant growth regulator indole-3-acetic acid (IAA), including IAA-Leu and IAA-Phe. Uses Mg and Co ions as cofactors.","IAA-LEUCINE RESISTANT 1 (ILR1)","IAA-LEUCINE RESISTANT 1 (ILR1)"]
["AT5G39510","magenta","Encodes a member of SNARE gene family. Homologous with yeast VTI1 and is involved in vesicle transport. Mutant alleles such as sgr4/zig are defective in the shoots response to gravity resulting in a zigzag growth pattern of the stem. Involved in protein trafficking to lytic vacuoles. Can conditionally substitute VTI12 in protein storage vacuole trafficking when plants are devoid of VTI12. The mRNA is cell-to-cell mobile.","SHOOT GRAVITROPSIM 4 (SGR4)","IMPAIRED TONOPLAST TRAFFIC 3 (ITT3); (ZIG1);SHOOT GRAVITROPSIM 4 (SGR4); (ZIG);VESICLE TRANSPORT V-SNARE 11 (ATVTI11); (ATVTI1A);VESICLE TRANSPORT V-SNARE 11 (VTI11);VESICLE TRANSPORT V-SNARE 1A (VTI1A)"]
["AT1G20870","magenta","Encodes an anti-silencing factor that prevents gene repression and DNA hypermethylation.","INCREASED DNA METHYLATION 3 (IDM3)","INCREASED DNA METHYLATION 3 (IDM3)"]
["AT3G62100","magenta","Encodes a member of the Aux/IAA family of proteins implicated in auxin signaling. IAA30 lacks the conserved degron (domain II) found in many family members. IAA30 transcripts are induced by auxin treatment and accumulate preferentially in the quiescent center cells of the root meristem. Overexpression of IAA30 leads to defects in gravitropism, root development, root meristem maintenance, and cotyledon vascular development. Target of LEC2 and AGL15. Promotes somatyic embryogenesis.","INDOLE-3-ACETIC ACID INDUCIBLE 30 (IAA30)","INDOLE-3-ACETIC ACID INDUCIBLE 30 (IAA30)"]
["AT2G31305","magenta","Encodes inhibitor-3 (Inh3), a regulatory subunit of protein phosphatase 1 (PP1). Inh3 inhibits the phosphatase activity of the PP1 catalytic subunit (PP1c). Biochemical analyses demonstrate that Inh3 binds to PP1c via the RVxF motif of Inh3, a consensus PP1c-binding sequence both in vitro and in vivo.","INHIBITOR-3 (INH3)","INHIBITOR-3 (INH3)"]
["AT2G02790","magenta","Encodes a microtubule-associated protein.Member of IQ67 (CaM binding) domain containing family.","IQ-DOMAIN 29 (IQD29)","IQ-DOMAIN 29 (IQD29)"]
["AT1G01260","magenta","bHLH13 interacts with JAZ proteins, and functions redundantly with bHLH3, bHLH14 and bHLH17 to negatively regulate jasmonate responses.","JASMONATE ASSOCIATED MYC2 LIKE 2 (JAM2)","JASMONATE ASSOCIATED MYC2 LIKE 2 (JAM2); (BHLH13); (BHLH013)"]
["AT1G30135","magenta","jasmonate-zim-domain protein 8;(source:Araport11)","JASMONATE-ZIM-DOMAIN PROTEIN 8 (JAZ8)","JASMONATE-ZIM-DOMAIN PROTEIN 8 (JAZ8); (tify5a)"]
["AT1G31120","magenta","potassium transporter","K+ UPTAKE PERMEASE 10 (KUP10)","K+ UPTAKE PERMEASE 10 (KUP10)"]
["AT2G32710","magenta","Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI). A member of seven KRP genes found in Arabidopsis thaliana. Negative regulator of cell division. Expressed in actively dividing cells.","KIP-RELATED PROTEIN 4 (KRP4)","KIP-RELATED PROTEIN 4 (KRP4);CYCLIN-DEPENDENT KINASE INHIBITOR 2 (ACK2);INTERACTORS OF CDC2 KINASE 7 (ICK7)"]
["AT3G19150","magenta","Kip-related protein (KRP) gene, encodes CDK (cyclin-dependent kinase) inhibitor (CKI), negative regulator of cell division. Binds to D type cyclins. A member of seven KRP genes found in Arabidopsis thaliana. Differential expression patterns for distinct KRPs were revealed by in situ hybridization. KRP6 appears to be targeted for degradation by RHF1a and RHF2a to allow mitotic divisions during gametogenesis. In addition, KRP6 transcript levels rise prior to and drop following the meitotic divisions of gametogenesis. Elevated levels of KRP6 negatively affect plant development and fertility.","KIP-RELATED PROTEIN 6 (KRP6)","KIP-RELATED PROTEIN 6 (KRP6); (ICK4);ARABIDOPSIS CDK INHIBITOR 1 (ACK1); (ATKRP6)"]
["AT1G14760","magenta","Encodes a novel Arabidopsis KNOX gene that encodes a MEINOX domain but lacks the homeodomain and interacts with TALE-class homeodomain proteins to modulate their activities","KNOX ARABIDOPSIS THALIANA MEINOX (KNATM)","KNOX ARABIDOPSIS THALIANA MEINOX (KNATM)"]
["AT1G77220","magenta","LAZ1H1 is a DUF300 that is localized to the tonoplast. Along with LAZ1 it appears to play a role in maintaining the structural integrity of vacuoles and regulating BR signaling by modulating downstream subcellular distribution of BAK1.","LAZ1 HOMOLOG1 (LAZ1H1)","LAZ1 HOMOLOG1 (LAZ1H1)"]
["AT3G05500","magenta","Encodes a protein that associates with lipid droplet surfaces and shares sequence homology with family of small rubber particle proteins. The mRNA is cell-to-cell mobile.","LD-ASSOCIATED PROTEIN 3 (LDAP3)","LD-ASSOCIATED PROTEIN 3 (LDAP3);SMALL RUBBER PARTICLE PROTEIN3 (SRP3)"]
["AT2G20130","magenta","like COV 1;(source:Araport11)","LIKE COV 1 (LCV1)","LIKE COV 1 (LCV1)"]
["AT4G00220","magenta","Encodes a protein containing a LOB domain that is expressed in embryos, flower primordium and lateral floral organ boundaries. Overexpression is correlated with activation of STM and KNAT1 and down regulation of PIN1 and reduced auxin transport levels. Ectopic expression in plants results in premature termination of the shoot apical meristem and small, lobed leaves. A maternally expressed imprinted gene.","JAGGED LATERAL ORGANS (JLO)","LOB DOMAIN-CONTAINING PROTEIN 30 (LBD30);JAGGED LATERAL ORGANS (JLO); (ASL19)"]
["AT1G67100","magenta","LOB domain-containing protein 40;(source:Araport11)","LOB DOMAIN-CONTAINING PROTEIN 40 (LBD40)","LOB DOMAIN-CONTAINING PROTEIN 40 (LBD40)"]
["AT5G03200","magenta","Paralog of LOG2 (At3g09770), a ubiquitin ligase that regulates amino acid export.","LOG2-LIKE UBIQUITIN LIGASE1 (LUL1)","LOG2-LIKE UBIQUITIN LIGASE1 (LUL1)"]
["AT1G19740","magenta","Chloroplast localized ATP-dependent protease La (LON) domain protein. Mutants are defective in anther dehiscence due to defects in lignification that may result from mis regulation of ROS scavenging enzymes.","LON DOMAIN-CONTAINING PROTEIN 1 (LCP1)","LON DOMAIN-CONTAINING PROTEIN 1 (LCP1)"]
["AT4G02560","magenta","Encodes a nuclear localized protein with similarity to transcriptional regulators. Recessive mutants are late flowering. Expression of LFY is reduced in LD mutants. LD has been reported to exhibit prion like behavior in yeast but it remains to be determined if such activity exists during normal plant development.","LUMINIDEPENDENS (LD)","LUMINIDEPENDENS (LD)"]
["AT5G65050","magenta","Originally published as Agamous like MADS-box protein AGL31. One of a group of MADS box genes involved in control of flowering time. Four variant sequences have been identified for this locus but have not been characterized for differences in expression pattern and/or function.","AGAMOUS-LIKE 31 (AGL31)","MADS AFFECTING FLOWERING 2 (MAF2);AGAMOUS-LIKE 31 (AGL31)"]
["AT2G18170","magenta","MAP kinase 7;(source:Araport11)","MAP KINASE 7 (MPK7)","MAP KINASE 7 (ATMPK7);MAP KINASE 7 (MPK7)"]
["AT1G73500","magenta","member of MAP Kinase Kinase family. Autophosphorylates and also phosphorylates MPK3 and MPK6. Independently involved in ethylene and calmalexin biosynthesis. Induces transcription of ACS2, ACS6, ERF1, ERF2, ERF5, ERF6, CYP79B2, CYP79B3, CYP71A13 and PAD3.","MAP KINASE KINASE 9 (MKK9)","MAP KINASE KINASE 9 (MKK9); (ATMKK9)"]
["AT5G03220","magenta","Encodes together with its paralog MED7B a subunit of the middle module of the transcriptional co-regulator Mediator complex. Regulates genes required for normal development of etiolated seedlings.","MED7A (MED7A)","MED7A (MED7A)"]
["AT4G32450","magenta","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)","MEF8 SIMILAR (MEF8S)","MEF8 SIMILAR (MEF8S)"]
["AT1G29400","magenta","A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML5 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM235. Among mei2-like genes, AML5 is the transcript with highest frequency of alternative splicing. Expression was detected during embryo development (heart and torpedo stage) and in vegetative and floral apices.","MEI2-LIKE PROTEIN 5 (ML5)","MEI2-LIKE PROTEIN 5 (ML5);MEI2-LIKE PROTEIN 5 (AML5)"]
["AT5G53760","magenta","A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO11 belongs to the clade I, with AtMLO4 and AtMLO14. The gene is expressed during early seedling growth (in primary root), in root tips and lateral root primordia, and in very young leaves, and in flowers and fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).","MILDEW RESISTANCE LOCUS O 11 (MLO11)","MILDEW RESISTANCE LOCUS O 11 (MLO11);MILDEW RESISTANCE LOCUS O 11 (ATMLO11)"]
["AT1G64300","magenta","HeLo domain-containing mixed lineage kinase domain-like protein (MLKL) associated with plasma membrane and cytoplasmic microtubules. A pseudokinase, mediates necroptotic cell death in animals.In Arabidopsis, mutations in the activation loop of MLKL1 resulted in enhanced resistance to powdery mildew pathogen.","MIXED LINEAGE KINASE LIKE 1 (ATMLKL1)","MIXED LINEAGE KINASE LIKE 1 (ATMLKL1)"]
["AT1G04260","magenta","Encodes protein that interacts with CaMV movement protein. Colocalizes in the cytoplasm with the movement protein. Has similarity to mammalian proteins (such as the rat PRA1) which have been described as rab acceptors.","CAMV MOVEMENT PROTEIN INTERACTING PROTEIN 7 (MPI7)","MP-INTERACTING 1 (MPI1);CAMV MOVEMENT PROTEIN INTERACTING PROTEIN 7 (MPI7);CAMV MOVEMENT PROTEIN INTERACTING PROTEIN 7 (MPIP7); (MPIP1);PRENYLATED RAB ACCEPTOR 1.D (PRA1.D); (MPI1)"]
["AT1G20830","magenta","Encodes MCD1 (MULTIPLE CHLOROPLAST DIVISION SITE 1). Determines the site of chloroplast division in concert with MinD (AT5G24020).","MULTIPLE CHLOROPLAST DIVISION SITE 1 (MCD1)","MULTIPLE CHLOROPLAST DIVISION SITE 1 (MCD1)"]
["AT3G04605","magenta","Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8).","MUSTANG 1 (MUG1)","MUSTANG 1 (MUG1)"]
["AT3G05850","magenta","Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8).","MUSTANG 7 (MUG7)","MUSTANG 7 (MUG7)"]
["AT4G34990","magenta","Member of the R2R3 transcription factor gene family.Transcriptional regulator involved in regulation of ABA response during seed germination and drought response.","MYB DOMAIN PROTEIN 32 (MYB32)","MYB DOMAIN PROTEIN 32 (AtMYB32);MYB DOMAIN PROTEIN 32 (MYB32)"]
["AT2G23290","magenta","Member of the R2R3 factor gene family. Modulates seed germination and root system development.","MYB DOMAIN PROTEIN 70 (MYB70)","MYB DOMAIN PROTEIN 70 (AtMYB70);MYB DOMAIN PROTEIN 70 (MYB70)"]
["AT3G10480","magenta","Encodes a NAC transcription factor that physically associates with the histone H3K4 demethylase JMJ14 and through that association is involved in transcriptional repression and flowering time control. It binds the NAC-binding site, the Mitochondrial Dysfunction Motif.","NAC DOMAIN CONTAINING PROTEIN 50 (NAC050)","NAC DOMAIN CONTAINING PROTEIN 50 (ANAC050);NAC DOMAIN CONTAINING PROTEIN 50 (NAC050); (NAC50)"]
["AT5G16800","magenta","Plasma membrane-anchored post-translationally acting N-acetyltransferase involved in high salt stress response.","N-ACETYLTRANSFERASE 60 (NAA60)","N-ACETYLTRANSFERASE 60 (NAA60)"]
["AT2G46870","magenta","Member of the RAV family of DNA binding proteins. Contains B3 domain. Recognizes 5'-CACCTG-'3 motif.","NGATHA1 (NGA1)","NGATHA1 (NGA1)"]
["AT3G54500","magenta","Member of a small family (4 proteins) in Arabidopsis that have some overlap in function. LNK2 along with LNK1 functions in the integration of light signaling and circadian clock. It is regulated by the clock TOC1 complex. Functions as a transcriptional coactivator.","NIGHT LIGHT-INDUCIBLE AND CLOCK-REGULATED GENE 2 (LNK2)","NIGHT LIGHT-INDUCIBLE AND CLOCK-REGULATED GENE 2 (LNK2)"]
["AT3G25882","magenta","encodes a kinase that physically interacts with NPR1/NIM1","NIM1-INTERACTING 2 (NIMIN-2)","NIM1-INTERACTING 2 (NIMIN-2)"]
["AT5G22300","magenta","encodes a nitrilase isomer. The purified enzyme shows a strong substrate specificity for beta-cyano-L-alanine, a intermediate product of the cyanide detoxification pathway. The mRNA is cell-to-cell mobile.","NITRILASE 4 (NIT4)","NITRILASE 4 (AtNIT4);NITRILASE 4 (NIT4)"]
["AT1G08300","magenta","no vein-like protein;(source:Araport11)","NO VEIN-LIKE (NVL)","NO VEIN-LIKE (NVL)"]
["AT3G17440","magenta","member of NPSN Gene Family; TGN/PM localized.","NOVEL PLANT SNARE 13 (NPSN13)","NOVEL PLANT SNARE 13 (NPSN13); (ATNPSN13)"]
["AT3G25260","magenta","Major facilitator superfamily protein;(source:Araport11)","NRT1/ PTR FAMILY 4.1 (NPF4.1)","NRT1/ PTR FAMILY 4.1 (NPF4.1); (ATNPF4.1)"]
["AT1G30640","magenta","Ubiquitously expressed protein kinase.","NUCLEAR DBF2-RELATED 7 (NDR7)","NUCLEAR DBF2-RELATED 7 (NDR7)"]
["AT3G20910","magenta","nuclear factor Y, subunit A9;(source:Araport11)","NUCLEAR FACTOR Y, SUBUNIT A9 (NF-YA9)","NUCLEAR FACTOR Y, SUBUNIT A9 (NF-YA9)"]
["AT5G23090","magenta","nuclear factor Y, subunit B13;(source:Araport11)","NUCLEAR FACTOR Y, SUBUNIT B13 (NF-YB13)","NUCLEAR FACTOR Y, SUBUNIT B13 (NF-YB13)"]
["AT1G31470","magenta","Major facilitator superfamily protein;(source:Araport11)","NUCLEAR FUSION DEFECTIVE 4 (NFD4)","NUCLEAR FUSION DEFECTIVE 4 (NFD4)"]
["AT1G30110","magenta","Encodes a ppGpp pyrophosphohydrolase.","NUDIX HYDROLASE HOMOLOG 25 (NUDX25)","NUDIX HYDROLASE HOMOLOG 25 (NUDX25);NUDIX HYDROLASE HOMOLOG 25 (ATNUDX25)"]
["AT1G05510","magenta","Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","OIL BODY-ASSOCIATED PROTEIN 1A (OBAP1A)","OIL BODY-ASSOCIATED PROTEIN 1A (OBAP1A)"]
["AT4G25140","magenta","Encodes oleosin1, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.","OLEOSIN 1 (OLEO1)","OLEOSIN 1 (OLE1);OLEOSIN 1 (OLEO1)"]
["AT5G40420","magenta","Encodes oleosin2, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds.","OLEOSIN 2 (OLEO2)","OLEOSIN 2 (OLE2);OLEOSIN 2 (OLEO2)"]
["AT3G27660","magenta","Encodes oleosin4 (Plant Cell, 2006, 18:1961), a protein found in oil bodies, involved in seed lipid accumulation. Functions in freezing tolerance of seeds. Note: also referred to as OLE3 in Plant Journal 2008, 55:798.","OLEOSIN 4 (OLEO4)","OLEOSIN 4 (OLEO4);OLEOSIN 3 (OLE3)"]
["AT5G51210","magenta","Encodes oleosin3, a protein found in oil bodies, involved in seed lipid accumulation.","OLEOSIN3 (OLEO3)","OLEOSIN3 (OLEO3)"]
["AT1G31010","magenta","organellar single-stranded DNA binding protein 4;(source:Araport11)","ORGANELLAR SINGLE-STRANDED DNA BINDING PROTEIN 4 (OSB4)","ORGANELLAR SINGLE-STRANDED DNA BINDING PROTEIN 4 (OSB4)"]
["AT1G01230","magenta","ORM1 is an ER localized orosomucoid-like protein involved in sphingolipid homeostasis.","(ATORM1)","OROSOMUCOID-LIKE 1 (ORM1); (ATORM1)"]
["AT3G52420","magenta","encodes a 7 kDa chloroplast outer envelope membrane protein.","OUTER ENVELOPE MEMBRANE PROTEIN 7 (OEP7)","OUTER ENVELOPE MEMBRANE PROTEIN 7 (OEP7);OUTER ENVELOPE MEMBRANE PROTEIN 7 (ATOEP7)"]
["AT5G47070","magenta","Encodes a member of the RLCK VII-4 subfamily of receptor-like cytoplasmic kinases that has been shown to phosphorylate MAPKKK5 Ser-599 and MEKK1 Ser-603, both players in PRR-mediated resistance to bacterial and fungal pathogens.","PBS1-LIKE 19 (PBL19)","PBS1-LIKE 19 (PBL19)"]
["AT3G10340","magenta","Encodes PAL4, a putative a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).","PHENYLALANINE AMMONIA-LYASE 4 (PAL4)","PHENYLALANINE AMMONIA-LYASE 4 (PAL4)"]
["AT1G63090","magenta","phloem protein 2-A11;(source:Araport11)","PHLOEM PROTEIN 2-A11 (PP2-A11)","PHLOEM PROTEIN 2-A11 (PP2-A11);PHLOEM PROTEIN 2-A11 (AtPP2-A11)"]
["AT3G09560","magenta","The PAH1 gene encodes a phosphatidate phosphohydrolase. Mutant analysis revealed its involvement in galactolipid synthesis pathway, and the membrane lipid remodeling. The pah1pah2 double-mutant showed enhanced Al-susceptibility under low-P conditions, but there was no significant differences in Al tolerance between pah1pah2 and wild type when they were grown in a solution containing 35 &#956;M Pi.","PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1 (PAH1)","PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1 (ATPAH1);PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1 (PAH1)"]
["AT2G46500","magenta","Phosphoinositide kinase which undergo autophosphorylation and phosphorylate serine/threonine residues of protein substrates. Contains phosphoinositide 3/4-kinase and ubiquitin-like domains. Phosphorylates PUFD1 and RPN10 in vitro.","PHOSPHOINOSITIDE 4-KINASE GAMMA 4 (PI4K GAMMA 4)","PHOSPHOINOSITIDE 4-KINASE GAMMA 4 (ATPI4K GAMMA 4);UBIQUITIN-LIKE DOMAIN KINASE GAMMA 4 (UBDK GAMMA 4);PHOSPHOINOSITIDE 4-KINASE GAMMA 4 (PI4K GAMMA 4)"]
["AT3G05630","magenta","Encodes a member of the PXPH-PLD subfamily of phospholipase D proteins. Regulates vesicle trafficking. Required for auxin transport and distribution and hence auxin responses. This subfamily is novel structurally different from the majority of plant PLDs by having phox homology (PX) and pleckstrin homology (PH) domains. Involved regulating root development in response to nutrient limitation. Plays a major role in phosphatidic acid production during phosphate deprivation. Induced upon Pi starvation in both shoots and roots. Involved in hydrolyzing phosphatidylcholine and phosphatidylethanolamine to produce diacylglycerol for digalactosyldiacylglycerol synthesis and free Pi to sustain other Pi-requiring processes. Does not appear to be involved in root hair patterning. Expression is upregulated in the shoot of cax1/cax3 mutant and is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots.","PHOSPHOLIPASE D P2 (PLDP2)","PHOSPHOLIPASE D P2 (PLDP2);PHOSPHOLIPASE D ZETA 2 (PDLZ2);PHOSPHOLIPASE D ZETA 2 (PLDZETA2)"]
["AT3G12810","magenta","Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6). The mRNA is cell-to-cell mobile.","PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1)","PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1); (SRCAP); (chr13)"]
["AT3G62090","magenta","encodes a novel Myc-related bHLH transcription factor, which physically associated with APRR1/TOC1 and is a member of PIF3 transcription factor family.","PHYTOCHROME INTERACTING FACTOR 3-LIKE 2 (PIL2)","PHYTOCHROME INTERACTING FACTOR 3-LIKE 2 (PIL2);PHYTOCHROME-INTERACTING FACTOR 6 (PIF6)"]
["AT5G01990","magenta","Intracellular auxin transport facilitator at the endoplasmic reticulum. High and low auxin conditions increase and reduce PILS6 protein levels. Non-optimum auxin concentrations are buffered by alterations in PILS6 abundance, consequently leading to homeostatic auxin output regulation.","PIN-LIKES 6 (PILS6)","PIN-LIKES 6 (PILS6)"]
["AT2G23140","magenta","PUB4 encodes a functional ubiquitin-protein ligase. The gene is expressed in most plant tissues and the protein localizes to the nucleus. PUB4 has been recovered as a second site suppressor from several different genetic screens and from these, it has been inferred to have roles in regulating root development, pollen tapetum development and ROS induced chloroplast degredation.","PLANT U-BOX 4 (PUB4)","PLANT U-BOX 4 (PUB4); (ATPUB4)"]
["AT1G20780","magenta","Encodes a protein containing a U-box and an ARM domain. Homozygous mutant seedlings have a seedling lethal phenotype with widespread cell death lesions throughout the cotyledons and roots.","SENESCENCE-ASSOCIATED E3 UBIQUITIN LIGASE 1 (SAUL1)","PLANT U-BOX 44 (PUB44);ARABIDOPSIS THALIANA PLANT U-BOX 44 (ATPUB44);SENESCENCE-ASSOCIATED E3 UBIQUITIN LIGASE 1 (SAUL1)"]
["AT3G62590","magenta","PLIP3 is a glycerolipid A1 lipase with substrate specificity for phosphatidylglycerol. Expression is induced by ABA.","PLASTID LIPAS3 (PLIP3)","PLASTID LIPAS3 (PLIP3)"]
["AT3G61680","magenta","PLIP1 encodes a plastid localized phospholipase A1 involved in seed oil biosynthesis.","PLASTID LIPASE1 (PLIP1)","PLASTID LIPASE1 (PLIP1)"]
["AT1G02660","magenta","PLIP2 is a glycerolipid A1 lipase with substrate preference for monogalactosyldiacylglycerol. Expression is induced by ABA.","PLASTID LIPASE2 (PLIP2)","PLASTID LIPASE2 (PLIP2)"]
["AT2G29700","magenta","Encodes a protein containing one PH (pleckstrin homology) domain with a short N-terminal extension The mRNA is cell-to-cell mobile.","PLECKSTRIN HOMOLOGUE 1 (PH1)","PLECKSTRIN HOMOLOGUE 1 (ATPH1);PLECKSTRIN HOMOLOGUE 1 (PH1)"]
["AT3G25840","magenta","Spliceosome-associated kinase involved in alternative splicing. May influence alternative splicing patterns by phosphorylating a subset of splicing regulators.","PRE-MRNA PROCESSING FACTOR 4 KINASE A (PRP4KA)","PRE-MRNA PROCESSING FACTOR 4 KINASE A (PRP4KA)"]
["AT4G38570","magenta","Putative CDP-diacylglycerol-inositol 3-phosphatidyltransferase 2;(source:Araport11)","PROBABLE CDP-DIACYLGLYCEROL--INOSITOL 3-PHOSPHATIDYLTRANSFERASE 2 (PIS2)","PROBABLE CDP-DIACYLGLYCEROL--INOSITOL 3-PHOSPHATIDYLTRANSFERASE 2 (PIS2)"]
["AT5G41580","magenta","Encodes an SP-RING domain containing protein that functions in sumolaytion and is involved in positive regulation of sulfur metabolism and stress response.","PROTEIN INHIBITOR OF ACTIVATED STAT LIKE 2 (PIAL2)","PROTEIN INHIBITOR OF ACTIVATED STAT LIKE 2 (PIAL2)"]
["AT1G18470","magenta","Putative C3HC4 zinc-finger ubiquitin E3 ligase that is induced by ABA and plays a positive role in ABA signaling.","PROTEIN WITH THE RING DOMAIN AND TMEMB_185A 3 (PPRT3)","PROTEIN WITH THE RING DOMAIN AND TMEMB_185A 3 (PPRT3); (ATPPRT3)"]
["AT5G60100","magenta","Encodes pseudo-response regulator 3 (APRR3/PRR3). PRR3 transcript levels vary in a circadian pattern with peak expression at dusk under long and short day conditions. PRR3 affects the period of the circadian clock and seedlings with reduced levels of PRR3 have shorter periods, based on transcriptional assays of clock-regulated genes. PRR3 is expressed in the vasculature of cotyledons and leaves where it may help stabilize the TOC1 protein by preventing interactions between TOC1 and the F-box protein ZTL.","PSEUDO-RESPONSE REGULATOR 3 (PRR3)","PSEUDO-RESPONSE REGULATOR 3 (PRR3)"]
["AT5G05440","magenta","Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.","PYRABACTIN RESISTANCE 1-LIKE 5 (PYL5)","PYRABACTIN RESISTANCE 1-LIKE 5 (PYL5); (ATPYL5);REGULATORY COMPONENT OF ABA RECEPTOR 8 (RCAR8)"]
["AT3G17810","magenta","Encodes a protein predicted to have dihydropyrimidine dehydrogenase activity. Its activity has not been demonstrated in vivo, but, it is required for efficient uracil catabolism in Arabidopsis. It localizes to the plastid.","PYRIMIDINE 1 (PYD1)","PYRIMIDINE 1 (PYD1)"]
["AT5G64370","magenta","PYD3 encodes a beta-ureidopropionase which, when expressed in E. coli, has been shown to convert beta-ureidopropionate into beta-alanine. It localizes to the cytosol and plays an important role in uracil degradation.","BETA-UREIDOPROPIONASE (BETA-UP)","PYRIMIDINE 3 (PYD3);BETA-UREIDOPROPIONASE (BETA-UP)"]
["AT3G12070","magenta","RAB geranylgeranyl transferase beta subunit 2;(source:Araport11)","RAB GERANYLGERANYL TRANSFERASE BETA SUBUNIT 2 (RGTB2)","RAB GERANYLGERANYL TRANSFERASE BETA SUBUNIT 2 (AtRGTB2);RAB GERANYLGERANYL TRANSFERASE BETA SUBUNIT 2 (RGTB2)"]
["AT5G03520","magenta","GTPase that colocalizes with golgi and plasma membranes.","RAB GTPASE HOMOLOG 8C (RAB8C)","RAB GTPASE HOMOLOG 8C (ATRAB8C); (ATRABE1D);RAB GTPASE HOMOLOG 8C (RAB8C);RAB HOMOLOG E1D (RAB-E1D);ARABIDOPSIS RAB HOMOLOG E1D (ATRAB-E1D)"]
["AT1G74200","magenta","receptor like protein 16;(source:Araport11)","RECEPTOR LIKE PROTEIN 16 (RLP16)","RECEPTOR LIKE PROTEIN 16 (AtRLP16);RECEPTOR LIKE PROTEIN 16 (RLP16)"]
["AT2G48010","magenta","receptor-like serine/threonine kinase (RKF3) The mRNA is cell-to-cell mobile.","RECEPTOR-LIKE KINASE IN IN FLOWERS 3 (RKF3)","RECEPTOR-LIKE KINASE IN IN FLOWERS 3 (RKF3)"]
["AT3G54510","magenta","Early-responsive to dehydration stress protein (ERD4);(source:Araport11)","REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 2.5 (OSCA2.5)","REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 2.5 (OSCA2.5)"]
["AT1G01360","magenta","Encodes RCAR1 (regulatory components of ABA receptor). Interacts with and regulates the type 2C protein phosphatases (PP2Cs) ABI1 and ABI2. Functions as abscisic acid sensor. The mRNA is cell-to-cell mobile.","REGULATORY COMPONENT OF ABA RECEPTOR 1 (RCAR1)","REGULATORY COMPONENT OF ABA RECEPTOR 1 (RCAR1);PYRABACTIN RESISTANCE 1-LIKE 9 (PYL9)"]
["AT1G53750","magenta","26S proteasome AAA-ATPase subunit RPT1a (RPT1a) mRNA,","REGULATORY PARTICLE TRIPLE-A 1A (RPT1A)","REGULATORY PARTICLE TRIPLE-A 1A (RPT1A)"]
["AT1G12750","magenta","RHOMBOID-like protein 6;(source:Araport11)","RHOMBOID-LIKE PROTEIN 6 (RBL6)","RHOMBOID-LIKE PROTEIN 6 (RBL6);RHOMBOID-LIKE PROTEIN 6 (ATRBL6)"]
["AT5G14420","magenta","Encodes RGLG2 (RING domain ligase 2), a RING domain ubiquitin E3 ligase that negatively regulates the drought stress response by mediating ERF53 transcriptional activity.","RING DOMAIN LIGASE2 (RGLG2)","RING DOMAIN LIGASE2 (RGLG2)"]
["AT5G01510","magenta","root UVB sensitive protein (Protein of unknown function, DUF647);(source:Araport11)","ROOT UV-B SENSITIVE 5 (RUS5)","ROOT UV-B SENSITIVE 5 (RUS5)"]
["AT1G63240","magenta","Methyl-DNA binding protein which interacts with RMB1 and ROS1 acting in the base excision repair pathway through DNA methylation.","ROS1-ASSOCIATED METHYL-DNA BINDING PROTEIN 1 (RMB1)","ROS1-ASSOCIATED METHYL-DNA BINDING PROTEIN 1 (RMB1)"]
["AT4G38740","magenta","Encodes cytosolic cyclophilin ROC1.","ROTAMASE CYP 1 (ROC1)","ROTAMASE CYP 1 (ROC1)"]
["AT4G36380","magenta","Encodes a cytochrome P-450 gene that is involved in leaf blade expansion by controlling polar cell expansion in the leaf length direction. Member of the CYP90C CYP450 family. ROT3 was shown to be involved in brassinosteroid biosynthesis, most likely in the conversion step of typhasterol (TY) to castasterone (CS). As 6-deoxo-CS was unable to restore the phenotype of rot3-1, it has been postulated that ROT3 might be specifically involved in the conversion of TY to CS in the C6-oxidation pathway of brassinolide. Recently, CYP90C1 was shown to catalyse the C-23 hydroxylation of several brassinosteroids (the enzyme has a broad specificity for 22-hydroxylated substrates).","ROTUNDIFOLIA 3 (ROT3)","ROTUNDIFOLIA 3 (ROT3)"]
["AT2G20310","magenta","Encodes RPM1 Interacting Protein 13 (RIN13), a resistance protein interactor shown to positively enhance resistance function of RPM1.","RPM1 INTERACTING PROTEIN 13 (RIN13)","RPM1 INTERACTING PROTEIN 13 (RIN13)"]
["AT3G29390","magenta","Nuclear localized K-homology containing protein that interacts with AS1.","RS2-INTERACTING KH PROTEIN (RIK)","RS2-INTERACTING KH PROTEIN (RIK); (ATKH16)"]
["AT1G65090","magenta","Protein of unknown function that is found on the surfaces of lipid droplets and may function to anchor the droplets to the plasma membrane.","SEED LIPID DROPLET PROTEIN1 (SLDP1)","SEED LIPID DROPLET PROTEIN1 (SLDP1)"]
["AT4G27140","magenta","seed storage albumin 1;(source:Araport11)","SEED STORAGE ALBUMIN 1 (SESA1)","SEED STORAGE ALBUMIN 1 (SESA1); (AT2S1)"]
["AT4G27170","magenta","seed storage albumin 4;(source:Araport11)","SEED STORAGE ALBUMIN 4 (SESA4)","SEED STORAGE ALBUMIN 4 (SESA4); (AT2S4)"]
["AT5G54740","magenta","seed storage albumin 5;(source:Araport11)","SEED STORAGE ALBUMIN 5 (SESA5)","SEED STORAGE ALBUMIN 5 (SESA5)"]
["AT3G10420","magenta","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","SEEDLING PLASTID DEVELOPMENT 1 (SPD1)","SEEDLING PLASTID DEVELOPMENT 1 (SPD1)"]
["AT1G71190","magenta","Senescence associated gene (SAG). Expression induced by ozone. Encodes a plant-specific protein of unknown function. Based on a personal communication from David Meinke (08/21/2007), this gene is not allelic to TTN4, even though this has been stated previously in a publication.","SENESCENCE ASSOCIATED GENE 18 (SAG18)","SENESCENCE ASSOCIATED GENE 18 (SAG18)"]
["AT1G69960","magenta","type 2A serine/threonine protein phosphatase (PP2A) mRNA, positive regulators of SPCH and thus stomatal production.","SERINE/THREONINE PROTEIN PHOSPHATASE 2A (PP2A)","SERINE/THREONINE PROTEIN PHOSPHATASE 2A (PP2A)"]
["AT5G53430","magenta","Homology Subgroup III; Orthology Group 2 - A putative histone methyltransferase (predicted to methylate H3K4) related to the Drosophila trithorax group proteins TRX and TRR and the yeast gene SET1. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.","SET DOMAIN GROUP 29 (SDG29)","SET DOMAIN GROUP 29 (SDG29);ARABIDOPSIS TRITHORAX 5 (ATX5); (SET29); (SDG29)"]
["AT4G15180","magenta","Encodes SET domain containing protein that acts redundantly with ATX4/5 to regulate histone H3-K4 methylation.","SET DOMAIN PROTEIN 2 (SDG2)","SET DOMAIN PROTEIN 2 (SDG2); (ATXR3)"]
["AT5G42400","magenta","Encodes ATXR7 (ARABIDOPSIS TRITHORAX-RELATED7), required for histone H3-K4 methylation and for transcriptional activation of Flowering Locus C.","SET DOMAIN PROTEIN 25 (SDG25)","SET DOMAIN PROTEIN 25 (SDG25);ARABIDOPSIS TRITHORAX-RELATED7 (ATXR7)"]
["AT1G26218","magenta","Natural antisense transcript overlaps with AT1G26220. Has been identified as a translated small open reading frame by ribosome profiling.","SHORT OPEN READING FRAME 14 (SORF14)","SHORT OPEN READING FRAME 14 (SORF14)"]
["AT1G17060","magenta","Encodes a protein with similarity to other cytochrome P450's and is a homolog of BAS1. Over expression causes a dwarf phenotype resembling brassinolide resistant mutants. Double mutant analysis of sob7/bas1 loss of function mutants suggests these genes have redundant functions in light responsiveness. SOB7 may function in metabolizing brassinolides. Expressed in leaf, root, stem and silique but expression highest in flower and cauline leaves. Dominant overexpressing plants have dwarf phenotype, short siliques/seeds, rounded dark green leaves and short hypocotyls in light and dark. Loss of function alleles result in plants with long hypocotyls.","CYTOCHROME P450 72C1 (CYP72C1)","SHRINK 1 (SHK1);SUPPRESSOR OF PHYB-4 7 (SOB7);CYTOCHROME P450 72C1 (CYP72C1);CHIBI 2 (CHI2)"]
["AT2G43190","magenta","Encodes a protein involved in rRNA but not tRNA maturation.","SIMILAR TO YEAST POP4 (POP4)","SIMILAR TO YEAST POP4 (POP4)"]
["AT2G45210","magenta","SAUR-like auxin-responsive protein family;(source:Araport11)","SMALL AUXIN UPREGULATED 36 (SAUR36)","SMALL AUXIN UPREGULATED 36 (SAUR36);SENESCENCE-ASSOCIATED GENE 201 (SAG201)"]
["AT3G60690","magenta","SAUR-like auxin-responsive protein family;(source:Araport11)","SMALL AUXIN UPREGULATED RNA 59 (SAUR59)","SMALL AUXIN UPREGULATED RNA 59 (SAUR59)"]
["AT5G20810","magenta","SAUR-like auxin-responsive protein family;(source:Araport11)","SMALL AUXIN UPREGULATED RNA 70 (SAUR70)","SMALL AUXIN UPREGULATED RNA 70 (SAUR70)"]
["AT2G37570","magenta","encodes a protein that can complement the salt-sensitive phenotype of a calcineurin (CaN)-deficient yeast mutant. This gene occurs in a single-copy and is 75% identical to tobacco SLT1 gene.","SODIUM- AND LITHIUM-TOLERANT 1 (SLT1)","SODIUM- AND LITHIUM-TOLERANT 1 (SLT1)"]
["AT5G58440","magenta","sorting nexin 2A;(source:Araport11)","SORTING NEXIN 2A (SNX2a)","SORTING NEXIN 2A (SNX2a)"]
["AT2G15900","magenta","Encodes a member of the Arabidopsis sorting nexin family.","SORTING NEXIN 4 (SNX4)","SORTING NEXIN 4 (SNX4)"]
["AT1G54150","magenta","Encodes a chloroplast-localized putative RING-type ubiquitin E3 ligase.","SP1-LIKE 2 (SPL2)","SP1-LIKE 2 (SPL2)"]
["AT5G53120","magenta","encodes a novel spermine synthase and is a paralog of previously characterized spermidine synthases, SPDS1 and SPDS2. SPDS3 forms heterodimers with SDPS2, which in turn forms heterodimers with SDPS1 in vivo. The gene does not complement speDelta3 deficiency of spermidine synthase in yeast but DOES complement speDelta4 deficiency.","SPERMIDINE SYNTHASE 3 (SPDS3)","SPERMIDINE SYNTHASE 3 (SPDS3)"]
["AT2G02570","magenta","Similar to SPF30 splicing factor. Under circadian control. Mutants have defects in alternative splicing and show more intron retention compared to wt.","SPLICING FACTOR 30 (SPF30)","SPLICING FACTOR 30 (SPF30)"]
["AT4G37760","magenta","squalene epoxidase 3;(source:Araport11)","SQUALENE EPOXIDASE 3 (SQE3)","SQUALENE EPOXIDASE 3 (SQE3)"]
["AT5G18830","magenta","Encodes a member of the Squamosa Binding Protein family of transcriptional regulators. SPL7 is expressed highly in roots and appears to play a role in copper homeostasis. Mutants are hypersensitive to copper deficient conditions and display a retarded growth phenotype. Copper deficiency response regulator.SPL7 binds to the promoter of the copper responsive miRNAs miR398b and miR389c and appears to regulate the expression of a number of genes under copper deficient conditions.","SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7 (SPL7)","SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 7 (SPL7)"]
["AT1G76090","magenta","Encodes S-adenosyl-methionine-sterol-C-methyltransferase, an enzyme in the sterol biosynthetic pathway.","STEROL METHYLTRANSFERASE 3 (SMT3)","STEROL METHYLTRANSFERASE 3 (SMT3)"]
["AT4G18530","magenta","DUF707 domain containing protein of unknown function. Mutants are defective in pollen development.","STICKY GENERATIVE CELL (SGC)","STICKY GENERATIVE CELL (SGC)"]
["AT4G22820","magenta","A member of the A20/AN1 zinc finger protein family involved in stress response.Expression is increased in response to water, salt , pathogen and other stressors.SAP9 can pull down both K48-linked and K63- linked tetraubiquitin chains and functions as a E3 ubiquitin ligase suggesting a role in proteasome-dependent protein degradation.","STRESS ASSOCIATED PROTEIN 9 (SAP9)","STRESS ASSOCIATED PROTEIN 9 (SAP9);STRESS ASSOCIATED PROTEIN 9 (ATSAP9)"]
["AT4G21326","magenta","subtilase 3.12;(source:Araport11)","SUBTILASE 3.12 (SBT3.12)","SUBTILASE 3.12 (SBT3.12);SUBTILASE 3.12 (ATSBT3.12)"]
["AT5G51040","magenta","Encodes succinate dehydrogenase assembly factor 2 (SDHAF2), a low abundance mitochondrial protein needed for assembly and activity of mitochondrial complex II and for normal root elongation.Sdhaf2 knockdown line showed lowered SDH1 protein abundance, lowered maximal SDH activity and less protein-bound FAD at the molecular mass of SDH1.","SUCCINATE DEHYDROGENASE ASSEMBLY FACTOR 2 (SDHAF2)","SUCCINATE DEHYDROGENASE ASSEMBLY FACTOR 2 (SDHAF2)"]
["AT5G67490","magenta","SDHAF4 acts on FAD-SDH1 and promotes its assembly with SDH2, thereby stabilizing SDH2 and enabling its full assembly with SDH3/SDH4 to form the SDH complex.","SUCCINATE DEHYDROGENASE ASSEMBLY FACTOR 4 (SDHAF4)","SUCCINATE DEHYDROGENASE ASSEMBLY FACTOR 4 (SDHAF4)"]
["AT4G14716","magenta","Encodes an acireductone dioxygenase that is activated by interaction with a heterotrimeric G protein beta subunit. It is a metalloenzyme and is likely involved in the methionine salvage pathway.","ACIREDUCTONE DIOXYGENASE 1 (ARD1)","SUPPRESSOR OF G BETA 3 (SGB3);ACIREDUCTONE DIOXYGENASE 1 (ARD1);ACIREDUCTONE DIOXYGENASE 1 (ATARD1)"]
["AT3G60400","magenta","Together with ATAD3 are required for mitochondrial nucleoid structure, their disruption confers heat tolerance.","SUPPRESSOR OF HOT1-4 1 (SHOT1)","SUPPRESSOR OF HOT1-4 1 (SHOT1);MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR-RELATED 18 (mTERF18)"]
["AT5G07980","magenta","Identified as a specific subunit of SYD-associated SWI/SNF (SAS) complexes (PMID:36471048).","SYD-ASSOCIATED SWI/SNF COMPLEX SUBUNIT 3 (SYS3)","SYD-ASSOCIATED SWI/SNF COMPLEX SUBUNIT 3 (SYS3)"]
["AT1G05500","magenta","Encodes a endomembrane-localized synaptotagmin. Synaptotagmin family proteins are calcium sensors that regulate exocytosis in mammalian cells.","(NTMC2T2.1)","SYNAPTOTAGMIN HOMOLOG E (SYTE);ARABIDOPSIS THALIANA SYNAPTOTAGMIN HOMOLOG E (ATSYTE);SYNAPTOTAGMIN 5 (SYT5); (NTMC2T2.1); (NTMC2TYPE2.1)"]
["AT5G44260","magenta","Encodes a Tandem CCCH Zinc Finger protein. Interacts and co-localizes with MARD1 and RD21A in processing bodies (PBs) and stress granules (SGs).","TANDEM CCCH ZINC FINGER PROTEIN 5 (TZF5)","TANDEM CCCH ZINC FINGER PROTEIN 5 (TZF5); (ATC3H61); (ATTZF5)"]
["AT2G31090","magenta","Encodes a signalling peptide influencing lateral organ separation.","TAXIMIN 1 (TAX1)","TAXIMIN 1 (TAX1)"]
["AT5G59430","magenta","Encodes a telomeric repeat binding protein with a DNA binding domain at its C terminus. The DNA binding domain has a preference for GGTTTAG sequences and at least five of these repeats are required for recognition by a nearly full-length TRP1 protein.","TELOMERIC REPEAT BINDING PROTEIN 1 (TRP1)","TELOMERIC REPEAT BINDING PROTEIN 1 (TRP1);TELOMERE REPEAT BINDING PROTEIN 1 (ATTRP1)"]
["AT1G24460","magenta","Encodes a novel protein that co-immunoprecipitates with SYP41. It is involved in vacuolar trafficking and salt tolerance, potentially via a role in vesicle fusion and in maintaining TGN structure or identity. Mutants display delayed formation of the Brefeldin A (BFA) compartment in cotyledons upon application of BFA.","TGN-LOCALIZED SYP41 INTERACTING PROTEIN (TNO1)","TGN-LOCALIZED SYP41 INTERACTING PROTEIN (TNO1)"]
["AT3G08710","magenta","Associated to plasma membrane. Moves cell to cell, suggesting a role in intercellular communication. The redox reaction between oxidized AtGPX3 and reduced AtTRXh9 is realized through the forming and breaking of disulfide bonds via the active sites of Cys4 and Cys57 in AtTRXh9.","THIOREDOXIN H-TYPE 9 (TH9)","THIOREDOXIN H-TYPE 9 (TH9);THIOREDOXIN TYPE H 9 (TRX H9);THIOREDOXIN H-TYPE 9 (ATH9); (TRXH9)"]
["AT3G22380","magenta","Encodes a nucleus-acting plant-specific clock regulator working close to the central oscillator and affecting the circadian gating of light responses. Circadian gating is the alteration of circadian phase according to the photoperiod of the entraining day/light cycle and the rhythmic antagonism of light responses in the early subjective night. TIC differentially regulates CCA1 and PRR9 from LHY, with LHY expression as a dominant genetic target of TIC action. Also shown to be invoved in the maintenance of Arabidopsis thaliana metabolic homeostasis.","TIME FOR COFFEE (TIC)","TIME FOR COFFEE (TIC)"]
["AT3G20070","magenta","Encodes a plant-specific protein of unknown function. Mutant embryos contain at most four small cells. The endosperm nucleoli are enlarged. Gene is expressed in siliques based on EST information.","TITAN9 (TTN9)","TITAN9 (TTN9)"]
["AT1G32400","magenta","TOM2A encodes a 280 amino acid putative four-pass transmembrane protein with a C-terminal farnesylation signal, essential for efficient multiplication of tobacco mosaic viruses.","TOBAMOVIRUS MULTIPLICATION 2A (TOM2A)","TOBAMOVIRUS MULTIPLICATION 2A (TOM2A)"]
["AT5G27030","magenta","TOPLESS family member involved in the negative regulation of SNC1-dependent phenotypes.","TOPLESS-RELATED 3 (TPR3)","TOPLESS-RELATED 3 (TPR3)"]
["AT1G73020","magenta","anoctamin-like protein;(source:Araport11)","TRANS MEMBRANE PROTEIN 16 (TMEM16)","TRANS MEMBRANE PROTEIN 16 (TMEM16)"]
["AT2G45290","magenta","Transketolase;(source:Araport11)","TRANSKETOLASE 2 (TKL2)","TRANSKETOLASE 2 (TKL2)"]
["AT4G03320","magenta","Encodes a component of the TIC (translocon at the inner envelope membrane of chloroplasts) protein translocation machinery mediating the protein translocation across the inner envelope of plastids. The Arabidopsis genome encodes four Tic20 homologous proteins, AT1G04940(Tic20-I), AT2G47840(Tic20-II), AT4G03320(Tic20-IV) and AT5G55710(Tic20-V).","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-IV (tic20-IV)","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-IV (tic20-IV);TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 20-IV (AtTic20-IV)"]
["AT1G36060","magenta","Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.Overexpression results in increased drought tolerance and vitrified leaves. Binds to DRE/GCC promoter elements and activates expression of aquaporin genes AtTIP1;1, AtTIP2;3, and AtPIP2;2.Involved in light induced suppression of germination via regulation of PIF1 and SOM expression. Its DNA binding activity is regulated by phyA and phyB.","TRANSLUCENT GREEN (TG)","TRANSLUCENT GREEN (TG); (WIND3); (ERF55)"]
["AT2G01820","magenta","Transmembrane kinase (TMK), member of the plant receptor-like kinase (RLK) family. TMKs are characterized by an extracellular leucine-rich-repeat (LRR) domain, a single transmembrane region and a cytoplasmic kinase domain. TMKs have been shown to act as critical modulators of cell expansion and cell proliferation.","TRANSMEMBRANE KINASE 3 (TMK3)","TRANSMEMBRANE KINASE 3 (TMK3)"]
["AT2G42330","magenta","GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain-containing protein;(source:Araport11)",null,"TRANS-MEMBRANE KINASE 4 (TMK4)"]
["AT5G65140","magenta","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)","TREHALOSE-6-PHOSPHATE PHOSPHATASE J (TPPJ)","TREHALOSE-6-PHOSPHATE PHOSPHATASE J (TPPJ)"]
["AT1G78580","magenta","Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain but no trehalose phosphatase (TPP)-like domain. ATTPS1 is able to complement yeast tps1 mutants in vivo. The gene product modulates cell growth but not cell differentiation by determining cell wall deposition and cell division. The N-terminal domain of TPS1 has a nuclear localization signal and an autoinhibitory function. The C-terminal domain is important for catalytic fidality of TPS1 and for appropriate signaling of the sucrose status by trehalose 6-phosphate levels in the plant (10.1105/tpc.19.00837).","TREHALOSE-6-PHOSPHATE SYNTHASE (TPS1)","TREHALOSE-6-PHOSPHATE SYNTHASE (ATTPS1);TREHALOSE-6-PHOSPHATE SYNTHASE (TPS1);TREHALOSE-6-PHOSPHATE SYNTHASE 1 (TPS1)"]
["AT1G06410","magenta","Encodes an enzyme putatively involved in trehalose biosynthesis. Though the protein has both trehalose-6-phosphate synthase (TPS)-like and trehalose-6-phosphate phosphatase (TPP)-like domains, neither activity has been detected in enzymatic assays nor has the protein been able to complement yeast TPS or TPP mutants.","TREHALOSE-PHOSPHATASE/SYNTHASE 7 (TPS7)","TREHALOSE-PHOSPHATASE/SYNTHASE 7 (ATTPS7);TREHALOSE -6-PHOSPHATASE SYNTHASE S7 (TPS7); (ATTPSA);TREHALOSE-PHOSPHATASE/SYNTHASE 7 (TPS7)"]
["AT1G17460","magenta","Arabidopsis thaliana myb family transcription factor (At1g17460)","TRF-LIKE 3 (TRFL3)","TRF-LIKE 3 (TRFL3)"]
["AT3G28150","magenta","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. A putative xyloglucan O-acetyltransferase. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","TRICHOME BIREFRINGENCE-LIKE 22 (TBL22)","TRICHOME BIREFRINGENCE-LIKE 22 (TBL22);ALTERED XYLOGLUCAN 4-LIKE (AXY4L)"]
["AT1G76900","magenta","Member of plant TLP family. Contains terminal F-box domain, interacts with ASK proteins. Tethered to the PM.","TUBBY LIKE PROTEIN 1 (TLP1)","TUBBY LIKE PROTEIN 1 (AtTLP1);TUBBY LIKE PROTEIN 1 (TLP1)"]
["AT5G36160","magenta","Encodes a cytosolic L-tyrosine aminotransferase. AtTAT2 exhibits much broader amino donor specificity than AtTAT1 and can use not only Tyr but also Phe, Trp, His, Met, Leu, Ala, Ser, Cys, Asp, Asn, Gln, and Arg as amino donors.","TYR AMINOTRANSFERASE 2 (TAT2)","TYR AMINOTRANSFERASE 2 (TAT2);TYR AMINOTRANSFERASE 2 (ATTAT2)"]
["AT5G15170","magenta","Tyrosyl-DNA phosphodiesterase 1 involved in DNA repair. TDP1 is involved the repair of Topoisomerase 1 cleavage complexes (tdp1 mutants are camptotecin hypersensitive). tdp1/wss1A double mutants show a synergistic sensitivity after camptothecin treatment. tdp1/mus81 double mutants show an elevated number of dead cells in root meristems after camptothecin treatment (compared to the single mutants).","TYROSYL-DNA PHOSPHODIESTERASE 1 (TDP1)","TYROSYL-DNA PHOSPHODIESTERASE 1 (TDP1)"]
["AT5G41340","magenta","Belongs to Ubiquitin conjugating enzyme family. Gene expression is developmentally regulated.","UBIQUITIN CONJUGATING ENZYME 4 (UBC4)","UBIQUITIN CONJUGATING ENZYME 4 (ATUBC4);UBIQUITIN CONJUGATING ENZYME 4 (UBC4)"]
["AT4G27960","magenta","ubiquitin conjugating enzyme","UBIQUITIN CONJUGATING ENZYME 9 (UBC9)","UBIQUITIN CONJUGATING ENZYME 9 (UBC9)"]
["AT5G18760","magenta","Together with ULS1 regulates leaf senescence and stomatal closure via repression of ABA transporter gene ABCG40.","UBIQUITIN LIGASE OF SENESCENCE 2 (ULS2)","UBIQUITIN LIGASE OF SENESCENCE 2 (ULS2)"]
["AT1G75440","magenta","ubiquitin-conjugating enzyme 16;(source:Araport11)","UBIQUITIN-CONJUGATING ENZYME 16 (UBC16)","UBIQUITIN-CONJUGATING ENZYME 16 (UBC16)"]
["AT5G42990","magenta","ubiquitin-conjugating enzyme 18;(source:Araport11)","UBIQUITIN-CONJUGATING ENZYME 18 (UBC18)","UBIQUITIN-CONJUGATING ENZYME 18 (UBC18)"]
["AT3G17000","magenta","Group XIV ubiquitin-conjugating enzyme that functions negative regulation of drought stress.","UBIQUITIN-CONJUGATING ENZYME 32 (UBC32)","UBIQUITIN-CONJUGATING ENZYME 32 (UBC32)"]
["AT3G53090","magenta","encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.","UBIQUITIN-PROTEIN LIGASE 7 (UPL7)","UBIQUITIN-PROTEIN LIGASE 7 (UPL7)"]
["AT5G17310","magenta","UDP-glucose pyrophosphorylase, functions redundantly with UGP1 for starch biosynthesis during pollen development.","UDP-GLUCOSE PYROPHOSPHORYLASE 2 (UGP2)","UDP-GLUCOSE PYROPHOSPHORYLASE 2 (UGP2)"]
["AT5G52560","magenta","Encodes a protein with UTP:sugar 1-phosphate uridylyltransferase activity, which has been shown to use a wide range of substrates including glucose-1-P, galactose-1-P, xylose-1-P, arabinose-1-P and glucuronate-1-P. The enzyme was shown to require Mg2+ or Mn2+ for activity. Mutations in USP can lead to a complete loss of male fertility.","UDP-SUGAR PYROPHOSPHORYLASE (USP)","UDP-SUGAR PYROPHOSPHORYLASE (USP);UDP-SUGAR PYROPHOSPHORYLASE (ATUSP)"]
["AT1G78130","magenta","Major facilitator superfamily protein;(source:Araport11)","UNFERTILIZED EMBRYO SAC 2 (UNE2)","UNFERTILIZED EMBRYO SAC 2 (UNE2)"]
["AT2G26230","magenta","Encodes a urate oxidase that is involved in peroxisome maintenance.","URATE OXIDASE (UOX)","URATE OXIDASE (UOX)"]
["AT1G26440","magenta","Encodes a ureide permease, uptake assays in yeast mutants indicated the longer splice variant is a cellular importer for allantoin, uracil and xanthine. Encodes 2 splice variants, UPS5L and UPS5S, which under nonstress conditions may function in allantoin degradation for nutrient recycling, whereas under stress, both genes may be involved in vesicular export allowing allantoin translocation from roots to shoots. Expression of this variant is enhanced in roots under salt stress. The central loop of the protein faces the cytosol (ReTA).","UREIDE PERMEASE 5 (UPS5)","UREIDE PERMEASE 5 (ATUPS5);UREIDE PERMEASE 5 (UPS5); (UPS5)"]
["AT4G16620","magenta","nodulin MtN21-like transporter family protein","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 8 (UMAMIT8)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 8 (UMAMIT8)"]
["AT5G53530","magenta","Homolog of yeast retromer subunit VPS26. Part of a retromer-like protein complex involved in endosome to lysosome protein transport.","VACUOLAR PROTEIN SORTING 26A (VPS26A)","VACUOLAR PROTEIN SORTING 26A (VPS26A)"]
["AT1G03950","magenta","vacuolar protein sorting-associated protein 2.3;(source:Araport11)","VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2.3 (VPS2.3)","VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2.3 (VPS2.3)"]
["AT5G09260","magenta","vacuolar protein sorting-associated protein 20.2;(source:Araport11)","VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 20.2 (VPS20.2)","VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 20.2 (VPS20.2)"]
["AT1G28520","magenta","VOZ transcription factor which acts as positive regulator of several salt-responsive genes. Functionally redundant in salt stress with VOZ2.","VASCULAR PLANT ONE ZINC FINGER PROTEIN (VOZ1)","VASCULAR PLANT ONE ZINC FINGER PROTEIN (VOZ1);VASCULAR PLANT ONE ZINC FINGER PROTEIN (ATVOZ1)"]
["AT3G54300","magenta","Encodes a member of Synaptobrevin -like protein family. VAMP727 is a R-SNARE and interacts with SYP22/VTI11/SYP51. It is required for trafficking of storage proteins to the protein storage vacuoles (PSV) and also for PSV organization and biogenesis. Loss of function mutations have no phenotype but double mutants with SYP22 are embryo lethal.","VESICLE-ASSOCIATED MEMBRANE PROTEIN 727 (VAMP727)","VESICLE-ASSOCIATED MEMBRANE PROTEIN 727 (ATVAMP727); (VAMP727);VESICLE-ASSOCIATED MEMBRANE PROTEIN 727 (VAMP727)"]
["AT2G26570","magenta","Encodes a coiled-coil protein WEB1 (weak chloroplast movement under blue light 1). WEB1, together with another coiled-coil protein WEB2/PMI2 (At1g66840), maintains the chloroplast photorelocation movement velocity.","WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 (WEB1)","WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 (WEB1)"]
["AT3G18750","magenta","Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.","WITH NO LYSINE (K) KINASE 6 (WNK6)","WITH NO LYSINE (K) KINASE 6 (WNK6); (ZIK5);ARABIDOPSIS THALIANA WITH NO K 6 (ATWNK6)"]
["AT4G26450","magenta","hypothetical protein;(source:Araport11)",null,"WPP DOMAIN INTERACTING PROTEIN 1 (WIP1)"]
["AT2G32150","magenta","Encodes a xanthosine monophosphate (XMP)phosphatase. Dephosphorylates XMP to xanthosine as an initial step in purine nucleotide catabolism.","XMP-SPECIFIC PHOSPHATASE (XMPP)","XMP-SPECIFIC PHOSPHATASE (XMPP)"]
["AT2G39340","magenta","Putative mRNA export factor that is highly co-expressed with PRP4KA.","YEAST SAC3 HOMOLOG A (SAC3A)","YEAST SAC3 HOMOLOG A (SAC3A); (AtSAC3A)"]
["AT2G04880","magenta","Encodes WRKY1, a member of the WRKY transcription factors in plants involved in disease resistance, abiotic stress, senescence as well as in some developmental processes. WRKY1 is involved in the salicylic acid signaling pathway. The crystal structure of the WRKY1 C-terminal domain revealed a zinc-binding site and identified the DNA-binding residues of WRKY1. The mRNA is cell-to-cell mobile.","ZINC-DEPENDENT ACTIVATOR PROTEIN-1 (ZAP1)","ZINC-DEPENDENT ACTIVATOR PROTEIN-1 (ZAP1); (ATWRKY1); (WRKY1)"]
["AT3G19580","magenta","Encodes zinc finger protein. mRNA levels are upregulated in response to ABA, high salt, and mild desiccation. The protein is localized to the nucleus and acts as a transcriptional repressor.","ZINC-FINGER PROTEIN 2 (ZF2)","ZINC-FINGER PROTEIN 2 (AZF2);ZINC-FINGER PROTEIN 2 (ZF2)"]
["AT5G48140","midnightblue","Pectin lyase-like superfamily protein;(source:Araport11)"]
["AT5G54095","midnightblue","proteoglycan-like protein;(source:Araport11)"]
["AT3G14040","midnightblue","Pectin lyase-like superfamily protein;(source:Araport11)"]
["AT3G07850","midnightblue","Pectin lyase-like superfamily protein;(source:Araport11)"]
["AT1G10770","midnightblue","Encodes a putative pectin methylesterase/invertase inhibitor. Anti-sense reduction of this gene's transcript results in pollen tube growth retardation and then partial male sterility and reduced seed set."]
["AT5G26700","midnightblue","RmlC-like cupins superfamily protein;(source:Araport11)"]
["AT4G03290","midnightblue","EF hand calcium-binding protein family;(source:Araport11)"]
["AT1G58120","midnightblue","hypothetical protein;(source:Araport11)"]
["AT3G28750","midnightblue","hypothetical protein;(source:Araport11)"]
["AT5G07430","midnightblue","Pectin lyase-like superfamily protein;(source:Araport11)"]
["AT1G35490","midnightblue","bZIP family transcription factor;(source:Araport11)"]
["AT3G49540","midnightblue","hypothetical protein;(source:Araport11)"]
["AT5G39880","midnightblue","transmembrane protein;(source:Araport11)"]
["AT3G01240","midnightblue","splicing regulatory glutamine/lysine-rich-like protein;(source:Araport11)"]
["AT3G54800","midnightblue","Pleckstrin homology (PH) and lipid-binding START domains-containing protein;(source:Araport11)"]
["AT3G07820","midnightblue","Pectin lyase-like superfamily protein;(source:Araport11)"]
["AT5G47000","midnightblue","Peroxidase superfamily protein;(source:Araport11)"]
["AT3G62710","midnightblue","Glycosyl hydrolase family protein;(source:Araport11)"]
["AT3G28830","midnightblue","mucin-like protein, putative (DUF1216);(source:Araport11)"]
["AT3G04700","midnightblue","carboxylate clamp-TPR protein (DUF1685);(source:Araport11)"]
["AT5G45880","midnightblue","Pollen Ole e 1 allergen and extensin family protein;(source:Araport11)"]
["AT5G50030","midnightblue","Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11)"]
["AT3G61160","midnightblue","GS3-like kinase, subgroup III.","(SK31/ASK&#946;)","(ASK&#946;); (SK31/ASK&#946;)"]
["AT1G14420","midnightblue","Pectate lyase","(AT59)","(AT59); (ATPLL8)"]
["AT3G01270","midnightblue","Pectate lyase","(ATPLL10)","(ATPLL10)"]
["AT5G07410","midnightblue","Encodes a pectin methylesterase implicated in the remodeling of pectins in pollen. Its expression is restricted to the male gametophyte (dry pollen, imbibed pollen and pollen tube). Mutants do not display any phenotype in the vegetative tissues. Pollen germination of KO mutant is strongly delayed in vivo and in vitro. Extra calcium restores the wild type phenotype in vitro.","PECTIN METHYLESTERASE 48 (PME48)","(ATPME48);PECTIN METHYLESTERASE 48 (PME48)"]
["AT2G07040","midnightblue","Pollen receptor kinase. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth.","(PRK2A)","(ATPRK2A); (PRK2A);POLLEN RECEPTOR LIKE KINASE 2 (PRK2); (ATPRK2)"]
["AT1G01980","midnightblue","Encodes an oligogalacturonide oxidase that inactivates the elicitor-active oligogalacturonides (OGs).","(ATBBE1)","(ATSEC1A);SIMILAR TO ELECTRON CARRIER 1A (SEC1A); (ATBBE1);OLIGOGALACTURONIDE OXIDASE 4 (OGOX4)"]
["AT2G47050","midnightblue","Encodes a pollen-expressed pectin methylesterase inhibitor that affects male fertility by regulating pollen viability and pollen tube growth.","(PMEIL)","(PMEIL)"]
["AT2G47030","midnightblue","Pectin methylesterase involved in pollen tube growth.","(VGDH1)","(VGDH1);PECTIN METHYLESTERASE 4 (PME4)"]
["AT5G12960","midnightblue","Derived from tandem duplication of AT5G12950. GH127 domain comtianing protein that is similar to beta-L- arabinofuranosidases.Most highly expressed in pollen.","&#61538;-L-ARABINOFURANOSIDASE 2 (PAF2)","&#61538;-L-ARABINOFURANOSIDASE 2 (PAF2)"]
["AT5G04180","midnightblue","alpha carbonic anhydrase 3;(source:Araport11)","ALPHA CARBONIC ANHYDRASE 3 (ACA3)","ALPHA CARBONIC ANHYDRASE 3 (ACA3);ALPHA CARBONIC ANHYDRASE 3 (ATACA3)"]
["AT3G57690","midnightblue","Encodes a putative arabinogalactan-protein (AGP23).","ARABINOGALACTAN PROTEIN 23 (AGP23)","ARABINOGALACTAN PROTEIN 23 (AGP23);ARABINOGALACTAN-PROTEIN 23 (ATAGP23)"]
["AT5G14380","midnightblue","Encodes an arabinogalactan protein that is expressed in pollen, pollen sac and pollen tube. Loss of AGP6 function results in decreased fertility due to defects in pollen tube growth.","ARABINOGALACTAN PROTEIN 6 (AGP6)","ARABINOGALACTAN PROTEIN 6 (AGP6)"]
["AT4G35010","midnightblue","putative beta-galactosidase (BGAL11 gene)","BETA-GALACTOSIDASE 11 (BGAL11)","BETA-GALACTOSIDASE 11 (BGAL11)"]
["AT2G31500","midnightblue","member of Calcium Dependent Protein Kinase","CALCIUM-DEPENDENT PROTEIN KINASE 24 (CPK24)","CALCIUM-DEPENDENT PROTEIN KINASE 24 (CPK24)"]
["AT1G05580","midnightblue","member of Putative Na+/H+ antiporter family","CATION/H+ EXCHANGER 23 (CHX23)","CATION/H+ EXCHANGER 23 (ATCHX23);CATION/H+ EXCHANGER 23 (CHX23)"]
["AT3G20580","midnightblue","COBRA-like protein 10 precursor;(source:Araport11)","COBRA-LIKE PROTEIN 10 PRECURSOR (COBL10)","COBRA-LIKE PROTEIN 10 PRECURSOR (COBL10)"]
["AT1G78460","midnightblue","SOUL heme-binding family protein;(source:Araport11)","CYTOSOLIC HEME (TETRAPYRROLE) BINDING PROTEIN 3 (CHBP3)","CYTOSOLIC HEME (TETRAPYRROLE) BINDING PROTEIN 3 (CHBP3)"]
["AT3G62230","midnightblue","Target promoter of the male germline-specific transcription factor DUO1. Increases seed oil content by attenuating GL2 inhibition. Overexpression results in reduced trichome numbers.","DUO1-ACTIVATED F-BOX 1 (DAF1)","DUO1-ACTIVATED F-BOX 1 (DAF1);MYB INTERACTION FACTOR 1 (MIF1)"]
["AT2G24450","midnightblue","Fasciclin-like arabinogalactan protein. Possibly involved in embryogenesis and seed development.","FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 PRECURSOR (FLA3)","FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 3 PRECURSOR (FLA3)"]
["AT5G19580","midnightblue","Galactose oxydase; may function in tissues that require mechanical reinforcements in the absence of lignification.","GALACTOSE OXIDASE-LIKE 6 (GOXL6)","GALACTOSE OXIDASE-LIKE 6 (GOXL6)"]
["AT3G43860","midnightblue","glycosyl hydrolase 9A4;(source:Araport11)","GLYCOSYL HYDROLASE 9A4 (GH9A4)","GLYCOSYL HYDROLASE 9A4 (AtGH9A4);GLYCOSYL HYDROLASE 9A4 (GH9A4)"]
["AT1G24520","midnightblue","Male fertility gene acting on tapetum and microspore","HOMOLOG OF BRASSICA CAMPESTRIS POLLEN PROTEIN 1 (BCP1)","HOMOLOG OF BRASSICA CAMPESTRIS POLLEN PROTEIN 1 (BCP1)"]
["AT3G19020","midnightblue","Pollen expressed protein required for pollen tube growth. Along with other members of the LRX family, interacts with RALF4 to control pollen tube growth and integrity. Loss of function results in premature pollen tube rupture and reduced fertility.","LEUCINE-RICH REPEAT/EXTENSIN 8 (LRX8)","LEUCINE-RICH REPEAT/EXTENSIN 8 (LRX8)"]
["AT1G49490","midnightblue","Pollen expressed protein required for pollen tube growth.Along with other members of the LRX family, itnteracts with RALF4 to control pollen tube growth and integrity. Loss of function results in premature pollen tube rupture and reduced fertility.","LEUCINE-RICH REPEAT/EXTENSIN 9 (LRX9)","LEUCINE-RICH REPEAT/EXTENSIN 9 (LRX9)"]
["AT4G26260","midnightblue","Encodes a myo-inositol oxygenase, which is the first enzyme in the inositol route to ascorbate (L&#8208;ascorbic acid, AsA, vitamin C). Overexpression results in enhanced biomass and abiotic stress tolerance.","MYO-INOSITOL OXYGENASE 4 (MIOX4)","MYO-INOSITOL OXYGENASE 4 (MIOX4)"]
["AT3G05610","midnightblue","Pectin methylesterase; INVI-PMEI protein isoform which clustered with a PME.","PECTIN METHYLESTERASE 21 (PME21)","PECTIN METHYLESTERASE 21 (PME21)"]
["AT2G26450","midnightblue","Pectin methylesterase inhibitor; INVI-PMEI protein isoform, clusters with a PME.","PECTIN METHYLESTERASE INHIBITOR-PME66 (PMEI-PME66)","PECTIN METHYLESTERASE INHIBITOR-PME66 (PMEI-PME66)"]
["AT2G40850","midnightblue","phosphoinositide 4-kinase gamma 1;(source:Araport11)","PHOSPHOINOSITIDE 4-KINASE GAMMA 1 (PI4K GAMMA 1)","PHOSPHOINOSITIDE 4-KINASE GAMMA 1 (ATPI4K GAMMA 1);PHOSPHOINOSITIDE 4-KINASE GAMMA 1 (PI4K GAMMA 1)"]
["AT2G45800","midnightblue","Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization.","PLIM2A (PLIM2a)","PLIM2A (PLIM2a)"]
["AT1G02790","midnightblue","encodes a exopolygalacturonase.","POLYGALACTURONASE 4 (PGA4)","POLYGALACTURONASE 4 (PGA4); (PG45)"]
["AT1G61566","midnightblue","Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.","RALF-LIKE 9 (RALFL9)","RALF-LIKE 9 (RALFL9)"]
["AT1G61563","midnightblue","Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.","RALF-LIKE 8 (RALFL8)","RAPID ALKALINIZATION FACTOR-8 (RALF8);RALF-LIKE 8 (RALFL8); (ATRALFL8)"]
["AT3G13390","midnightblue","SKU5 similar 11;(source:Araport11)","SKU5 SIMILAR 11 (sks11)","SKU5 SIMILAR 11 (sks11)"]
["AT1G55560","midnightblue","SKU5 similar 14;(source:Araport11)","SKU5 SIMILAR 14 (sks14)","SKU5 SIMILAR 14 (sks14)"]
["AT3G13400","midnightblue","Encodes a pollen/pollen tube-specific gene that is essential for pollen tube growth in the transmitting tract by mediating the biosynthesis of JA that modifies the components of pollen tube cell walls. The SKS13 protein was distributed throughout the cytoplasm and pollen tube walls at the apical region.","SKU5-SIMILAR 13 (SKS13)","SKU5-SIMILAR 13 (SKS13)"]
["AT3G62170","midnightblue","Pectin methylesterase inhibitor; INVI-PMEI protein isoform which clustered with a PME.","VANGUARD 1 HOMOLOG 2 (VGDH2)","VANGUARD 1 HOMOLOG 2 (VGDH2);PECTIN METHYLESTERASE INHIBITOR-PECTIN METHYLESTERASE 37 (PMEI-PME37)"]
["AT2G47040","midnightblue","Share high homologies with a group of pectin methylesterases (PME), pollen specific, and is required for enhancing the growth of pollen tube in style and transmitting tract tissues.","VANGUARD1 (VGD1)","VANGUARD1 (VGD1)"]
["AT1G63810","pink","nucleolar protein;(source:Araport11)"]
["AT4G03180","pink","rRNA-processing protein;(source:Araport11)"]
["AT5G39840","pink","ATP-dependent RNA helicase;(source:Araport11)"]
["AT2G36730","pink","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G75335","pink","nucleolar-like protein;(source:Araport11)"]
["AT2G15000","pink","caspase-6 protein;(source:Araport11)"]
["AT3G49740","pink","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G28660","pink","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G28370","pink","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G22100","pink","RNA cyclase family protein;(source:Araport11)"]
["AT1G12830","pink","nucleolin;(source:Araport11)"]
["AT2G35120","pink","Single hybrid motif superfamily protein;(source:Araport11)"]
["AT3G13940","pink","DNA binding / DNA-directed RNA polymerase;(source:Araport11)"]
["AT4G34412","pink","EKC/KEOPS complex subunit tprkb-like protein;(source:Araport11)"]
["AT1G72420","pink","NADH:ubiquinone oxidoreductase intermediate-associated protein 30;(source:Araport11)"]
["AT5G37570","pink","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)"]
["AT5G12220","pink","las1-like family protein;(source:Araport11)"]
["AT4G10620","pink","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT2G34400","pink","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)"]
["AT1G67120","pink","Represents a homolog of the yeast MDN gene, which encodes a non-ribosomal protein involved in the maturation and assembly of the 60S ribosomal subunit. In Arabidopsis, it is essential for female gametogenesis progression."]
["AT5G16860","pink","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G38890","pink","Nucleic acid-binding, OB-fold-like protein;(source:Araport11)"]
["AT5G14580","pink","polyribonucleotide nucleotidyltransferase;(source:Araport11)"]
["AT4G11120","pink","translation elongation factor Ts (EF-Ts);(source:Araport11)"]
["AT1G74250","pink","DNAJ heat shock N-terminal domain-containing protein;(source:Araport11)"]
["AT2G19870","pink","tRNA/rRNA methyltransferase (SpoU) family protein;(source:Araport11)"]
["AT5G02050","pink","Mitochondrial glycoprotein family protein;(source:Araport11)"]
["AT2G21350","pink","RNA-binding CRS1 / YhbY (CRM) domain protein;(source:Araport11)"]
["AT4G15770","pink","RNA binding protein;(source:Araport11)"]
["AT1G63250","pink","DEA(D/H)-box RNA helicase family protein;(source:Araport11)"]
["AT2G34357","pink","ARM repeat superfamily protein;(source:Araport11)"]
["AT1G14060","pink","GCK domain-containing protein;(source:Araport11)"]
["AT2G21440","pink","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT2G36970","pink","UDP-Glycosyltransferase superfamily protein;(source:Araport11)"]
["AT5G19300","pink","methyltransferase C9orf114 protein;(source:Araport11)"]
["AT4G28450","pink","This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase"]
["AT3G48830","pink","tRNA nucleotidyltransferase/polyA polymerase family protein;(source:Araport11)"]
["AT1G30240","pink","proline-, glutamic acid/leucine-rich protein;(source:Araport11)"]
["AT4G04940","pink","transducin family protein / WD-40 repeat family protein;(source:Araport11)"]
["AT5G28460","pink","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G10530","pink","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT5G67640","pink","hypothetical protein;(source:Araport11)"]
["AT3G46870","pink","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G30060","pink","Pleckstrin homology (PH) domain superfamily protein;(source:Araport11)"]
["AT3G01800","pink","Ribosome recycling factor;(source:Araport11)"]
["AT5G05210","pink","Surfeit locus protein 6, Rrp14 ortholog."]
["AT1G60640","pink","stress response protein;(source:Araport11)"]
["AT1G71850","pink","Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11)"]
["AT3G55605","pink","Mitochondrial glycoprotein family protein;(source:Araport11)"]
["AT5G14590","pink","Isocitrate/isopropylmalate dehydrogenase family protein;(source:Araport11)"]
["AT1G02870","pink","nucleolar-like protein;(source:Araport11)"]
["AT3G58520","pink","Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11)"]
["AT3G12340","pink","FKBP-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11)"]
["AT1G09190","pink","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G20430","pink","phosphorylated adapter RNA export-like protein;(source:Araport11)"]
["AT1G29030","pink","Apoptosis inhibitory protein 5 (API5);(source:Araport11)"]
["AT2G42280","pink","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)"]
["AT5G51220","pink","ubiquinol-cytochrome C chaperone family protein;(source:Araport11)"]
["AT5G42150","pink","Glutathione S-transferase family protein;(source:Araport11)"]
["AT4G37090","pink","UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase;(source:Araport11)"]
["AT4G26780","pink","unknown function","(AR192)","(AR192);MITOCHONDRIAL GRPE 2 (MGE2)"]
["AT3G05970","pink","encode peroxisomal long-chain acyl-CoA synthetase (LACS) isozymes","LONG-CHAIN ACYL-COA SYNTHETASE 6 (LACS6)","(ATLACS6);LONG-CHAIN ACYL-COA SYNTHETASE 6 (LACS6)"]
["AT1G65700","pink","De&#64257;nes and confers the functional speci&#64257;city of the LSM2-8 spliceosome core complex, which is involved in splicing through the stabilization of the U6 snRNA. Client of Hsp90, mediated by PFD4.","SM-LIKE 8 (LSM8)","(ATLSM8);SM-LIKE 8 (LSM8)"]
["AT1G60850","pink","DNA-directed RNA polymerase family protein;(source:Araport11)","(ATRPAC42)","(ATRPAC42); (AAC42)"]
["AT5G13830","pink","FtsJ-like methyltransferase family protein;(source:Araport11)","TRNA METHYLTRANSFERASE 7C (TRM7C)","(ATTRM7C);TRNA METHYLTRANSFERASE 7C (TRM7C)"]
["AT3G27550","pink","Mitochondrial protein involved in RNA splicing. Required for normal mitochondrion biogenesis.","(CFM9)","(CFM9)"]
["AT5G18820","pink","Encodes a subunit of chloroplasts chaperonins that are involved in mediating the folding of newly synthesized, translocated, or stress-denatured proteins. Cpn60 subunits are: Cpn60alpha1 (At2g28000), AtCpn60alpha2 (At5g18820), AtCpn60beta1 (At1g55490), AtCpn60beta2 (At3g13470), AtCpn60beta3 (At5g56500), AtCpn60beta4 (At1g26230).","(CPNA2)","(CPN60A2); (CPNA2);EMBRYO DEFECTIVE 3007 (EMB3007);CHAPERONIN-60ALPHA2 (CPN60ALPHA2)"]
["AT5G40770","pink","Prohibitin 3. PHB3 may function as an assembly factor of the mitochondrial ATP synthase. (PMID:37240131).","PROHIBITIN 3 (PHB3)","(EER3);PROHIBITIN 3 (PHB3);PROHIBITIN 3 (ATPHB3)"]
["AT5G62440","pink","Encodes a protein DOMINO1 that belongs to a plant-specific gene family sharing a common motif present in the tomato DEFECTIVE CHLOROPLASTS AND LEAVES (LeDCL) protein. DOMINO1 is located in the nucleus. Arabidopsis embryos carrying the domino1 mutation grow slowly in comparison with wild type embryos and reach only the globular stage at desiccation. The primary defect of the mutation at the cellular level is the large size of the nucleolus that can be observed soon after fertilization in the nuclei of both the embryo and the endosperm. DOMINO1 might have a role in ribosome biogenesis and in determining the rate of cell division.","(DOM1)","(EMB514); (DOM1)"]
["AT5G39960","pink","GTP-binding protein;(source:Araport11)","(ENGA-2)","(ENGA-2)"]
["AT1G30960","pink","Ortholog of ERA (E. coli RAS-like protein)-related GTPase (ERG). Mitochondrial protein that associates with 18sRNA. Heterozygous mutants segregate for embryo lethality inherited as a sporphytic maternal effect. Increased ROS in the mutant ovule suggests a heritable mitochondrial defect results in lethality.","(ERA-2)","(ERA-2);ERA (E. COLI RAS-LIKE PROTEIN)-RELATED GTPASE 2 (ERG2); (ATERG2)"]
["AT2G20490","pink","nucleolar RNA-binding Nop10p family protein;(source:Araport11)","(NOP10)","(NOP10);EMBRYO SAC DEVELOPMENT ARREST 27 (EDA27)"]
["AT1G68990","pink","MGP3 (male gametophyte-defective 3) belongs to a small family of nuclear-encoded Phage type RNA polymerases (RPOTs) involved in the transcription of mitochondrial genes in Arabidopsis thaliana. Mutation in MGP 3 significantly retarded pollen tube growth and caused defective embryo development.","MALE GAMETOPHYTE DEFECTIVE 3 (MGP3)","(RPOTM);MALE GAMETOPHYTE DEFECTIVE 3 (MGP3)"]
["AT3G19508","pink","complex 1 protein, LYR family protein;(source:Araport11)","(SDHAF3)","(SDHAF3)"]
["AT3G07590","pink","SmD1a is one of two Yeast SmD1 orthologs, lower levels than SmD1b.It is localized to the nucleus and may play a minor role in RNA splicing and indirectly facilitating PTGS.","(SMD1A)","(SMD1A)"]
["AT2G14880","pink","SWIB/MDM2 domain superfamily protein;(source:Araport11)","(SWIB2)","(SWIB2)"]
["AT3G48990","pink","Encodes an oxalyl-CoA synthetase and is required for oxalate degradation, for normal seed development, and for defense against an oxalate-producing fungal pathogen.","ACYL-ACTIVATING ENZYME 3 (AAE3)","ACYL-ACTIVATING ENZYME 3 (AAE3)"]
["AT3G15460","pink","Encodes one of two Arabidopsis orthologs of yeast BRX1, a protein involved in maturation of the large ribosomal subunit. The proteins are mainly localized in nucleolus. Mutant plants are affected in pre-rRNA processing.","ARABIDOPSIS HOMOLOGUE OF YEAST BRX1 1 (ATBRX1-1)","ARABIDOPSIS HOMOLOGUE OF YEAST BRX1 1 (ATBRX1-1)"]
["AT3G07630","pink","Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identi&#64257;ed in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].","AROGENATE DEHYDRATASE 2 (ADT2)","AROGENATE DEHYDRATASE 2 (ADT2);ARABIDOPSIS THALIANA AROGENATE DEHYDRATASE 2 (AtADT2)"]
["AT5G16930","pink","Homologue of animal ATPase Family AAA Domain-Containing Protein 3 (ATAD3), which is involved in mitochondrial nucleoid organization; interacts with SHOT1.","SHOT1 BINDING ATPASE 2 (SBA2)","ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 3A2 (ATAD3A2);SHOT1 BINDING ATPASE 2 (SBA2)"]
["AT3G48250","pink","Encodes a pentatricopeptide repeat protein implicated in splicing of intron 1 of mitochondrial nad7 transcripts.","BUTHIONINE SULFOXIMINE-INSENSITIVE ROOTS 6 (BIR6)","BUTHIONINE SULFOXIMINE-INSENSITIVE ROOTS 6 (BIR6)"]
["AT2G03670","pink","CDC48 - like protein AAA-type ATPaseCell. division control protein 48 homolog B","CELL DIVISION CYCLE 48B (CDC48B)","CELL DIVISION CYCLE 48B (CDC48B)"]
["AT5G04130","pink","Encodes a protein that when expressed together with GYRA generates an active supercoiling DNA gyrase enzyme that shares similar properties to its bacterial counterpart, including sensitivity to gyrase-specific antibiotics.","DNA GYRASE B2 (GYRB2)","DNA GYRASE B2 (GYRB2)"]
["AT2G15690","pink","Encodes an atypical PPR-DYW protein containing five predicted PPR domains and a C-terminal DYW domain separated by an amino acid sequence that do not clearly correspond to an E domain. It is expressed in both the mitochondrion and chloroplast and is also involved in RNA editing in the mitochondrion and chloroplast as a core member of E+-type PPR editosomes.","DYW DOMAIN PROTEIN 2 (DYW2)","DYW DOMAIN PROTEIN 2 (DYW2); (BLX)"]
["AT2G43650","pink","SAS10/C1D family protein. Loss of function mutants are embryo lethal.Ubiquitously expressed, with preference for tissues undergoing rapid cellular growth and differentiation.","EMBRYO DEFECTIVE 2777 (EMB2777)","EMBRYO DEFECTIVE 2777 (EMB2777);THALLO (THAL); (EMB2796)"]
["AT4G27010","pink","ribosome 60S biogenesis amino-terminal protein;(source:Araport11)","EMBRYO DEFECTIVE 2788 (EMB2788)","EMBRYO DEFECTIVE 2788 (EMB2788)"]
["AT4G00620","pink","Amino acid dehydrogenase family protein;(source:Araport11)","EMBRYO DEFECTIVE 3127 (EMB3127)","EMBRYO DEFECTIVE 3127 (EMB3127)"]
["AT4G05440","pink","Plays a role in pollen development and modulating DNA replication via interaction with MCM4 and MCM7 of the pre-replication complex.","EMBRYO SAC DEVELOPMENT ARREST 35 (EDA35)","EMBRYO SAC DEVELOPMENT ARREST 35 (EDA35);BICELLULAR POLLEN 1 (BICE1)"]
["AT4G13850","pink","Encodes a glycine-rich RNA-binding protein. Gene expression is induced by cold.","RNA-BINDING GLYCINE-RICH PROTEIN A5 (RBGA5)","GLYCINE-RICH RNA-BINDING PROTEIN 2 (ATGRP2);RNA-BINDING GLYCINE-RICH PROTEIN A5 (RBGA5);GLYCINE RICH PROTEIN 2 (GRP2);GLYCINE-RICH RNA-BINDING PROTEIN 2 (GR-RBP2)"]
["AT5G60730","pink","One of 3 GET paralogs in Arabidopsis. GET3c is a mitochondrion localized protein with no obvious role in Tail Anchored (TA) protein insertion.","GUIDED ENTRY OF TAIL-ANCHORED PROTEINS 3B (GET3C)","GUIDED ENTRY OF TAIL-ANCHORED PROTEIN 3C (ATGET3C);GUIDED ENTRY OF TAIL-ANCHORED PROTEINS 3B (GET3C)"]
["AT3G07770","pink","HEAT SHOCK PROTEIN 89.1;(source:Araport11)","HEAT SHOCK PROTEIN 89.1 (Hsp89.1)","HEAT SHOCK PROTEIN 89.1 (Hsp89.1);HEAT SHOCK PROTEIN 90.6 (AtHsp90.6);HEAT SHOCK PROTEIN 90-6 (AtHsp90-6)"]
["AT2G19540","pink","Transducin family protein / WD-40 repeat family protein;(source:Araport11)","HEAT STRESS TOLERANT DWD 1 (HTD1)","HEAT STRESS TOLERANT DWD 1 (HTD1)"]
["AT2G34260","pink","Encodes a WDxR motif-containing protein that is required for gametogenesis, seed and endosperm development.","HUMAN WDR55 (WD40 REPEAT) HOMOLOG (WDR55)","HUMAN WDR55 (WD40 REPEAT) HOMOLOG (WDR55)"]
["AT5G06550","pink","Encodes a HR demethylase that acts as a positive regulator of seed germination in the PHYB-PIL5-SOM pathway.","JUMONJI DOMAIN-CONTAINING PROTEIN 22 (JMJ22)","JUMONJI DOMAIN-CONTAINING PROTEIN 22 (JMJ22)"]
["AT4G21220","pink","Trimeric LpxA-like enzymes superfamily protein;(source:Araport11)","LIPID X D2 (LPXD2)","LIPID X D2 (LPXD2); (ATLPXD2)"]
["AT3G10050","pink","first enzyme in the biosynthetic pathway of isoleucine","L-O-METHYLTHREONINE RESISTANT 1 (OMR1)","L-O-METHYLTHREONINE RESISTANT 1 (OMR1)"]
["AT5G26860","pink","Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins. The mRNA is cell-to-cell mobile.","LON PROTEASE 1 (LON1)","LON PROTEASE 1 (LON1); (LON_ARA_ARA)"]
["AT5G35620","pink","Cap-binding protein, binds to the 5' cap structure of nuclear-encoded mRNAs. Mutant is resistant to potyvirus infection.","LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1 (LSP1)","LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1 (LSP1);EUKARYOTIC INITIATION FACTOR (ISO)4E (EIF(ISO)4E);EUKARYOTIC TRANSLATION INITIATION FACTOR ISOFORM 4E (eIFiso4E);EUKARYOTIC TRANSLATION INITATION FACTOR 4E2 (EIF4E2); (LSP)"]
["AT2G34570","pink","PIN domain-like family protein;(source:Araport11)","MATERNAL EFFECT EMBRYO ARREST 21 (MEE21)","MATERNAL EFFECT EMBRYO ARREST 21 (MEE21)"]
["AT3G12770","pink","Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing.","MITOCHONDRIAL EDITING FACTOR 22 (MEF22)","MITOCHONDRIAL EDITING FACTOR 22 (MEF22)"]
["AT5G09840","pink","Putative endonuclease or glycosyl hydrolase;(source:Araport11)","MITOCHONDRIAL NUCLEASE2 (MNU2)","MITOCHONDRIAL NUCLEASE2 (MNU2)"]
["AT3G18580","pink","Member of the family of canonical mitochondrial DNA binding proteins. Single-stranded binding protein which does not interfere with MMEJ.","MITOCHONDRIAL SINGLE-STRANDED BINDING PROTEIN 2 (SSB2)","MITOCHONDRIAL SINGLE-STRANDED BINDING PROTEIN 2 (SSB2)"]
["AT1G32580","pink","Member of MORF family consisting of of nine full-length proteins encoded in the nuclear genome. MORF proteins are required for all RNA editing events in plastids and for many, possibly also all, sites in mitochondria. Potential link between the RNA binding PPR protein and the protein contributing the enzymatic activity in RNA editing.","MULTIPLE ORGANELLAR RNA EDITING FACTOR 5 (MORF5)","MULTIPLE ORGANELLAR RNA EDITING FACTOR 5 (MORF5)"]
["AT3G57940","pink","Involved in RNA acetylation on N4-cytidine.","N-ACETYLTRANSFERASE2 FOR CYTIDINE IN RNA (ACYR2)","N-ACETYLTRANSFERASE2 FOR CYTIDINE IN RNA (ACYR2);N-ACETYLTRANSFERASE 10B (NAT10B); (ATNAT10B)"]
["AT1G18800","pink","Double nrp1-1 nrp2-1 mutants show arrest of cell cycle progression at G2/M and disordered cellular organization occurred in root tips. Localize in the nucleus and can form homomeric and heteromeric protein complexes with NRP1. Bind histones Histone2A and Histone2B and associate with chromatin in vivo. Plant mutated in both NRP1 and NRP2 genes show hypersensitivity to genotoxic stresses including UV and DSB-inducing agent Bleomycin. NRP genes act synergistically with NAP1 genes in promoting somatic homologous recombination.","NAP1-RELATED PROTEIN 2 (NRP2)","NAP1-RELATED PROTEIN 2 (NRP2)"]
["AT1G29940","pink","Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A).","NUCLEAR RNA POLYMERASE A2 (NRPA2)","NUCLEAR RNA POLYMERASE A2 (NRPA2)"]
["AT2G17250","pink","Encodes a nucleolar protein that is a ribosome biogenesis co-factor. Mutants display aberrant RNA processing and homozygous embryos arrest in the globular stage of development.","EMBRYO DEFECTIVE 2762 (EMB2762)","NUCLEOLAR COMPLEX ASSOCIATED 4 (NOC4);EMBRYO DEFECTIVE 2762 (EMB2762)"]
["AT3G49240","pink","Encodes NUWA, an imprinted gene that controls mitochondrial function in early seed development. It is expressed in both the mitochondrion and chloroplast and is also involved in RNA editing in the mitochondrion and chloroplast as a core member of E+-type PPR editosomes.","NUWA (NUWA)","NUWA (NUWA);EMBRYO DEFECTIVE 1796 (emb1796)"]
["AT2G35720","pink","Encodes OWL1, a J-domain protein involved in perception of very low light fluences.","ORIENTATION UNDER VERY LOW FLUENCES OF LIGHT 1 (OWL1)","ORIENTATION UNDER VERY LOW FLUENCES OF LIGHT 1 (OWL1)"]
["AT5G48470","pink","hypothetical protein;(source:Araport11)","PEP-RELATED DEVELOPMENT ARRESTED 1 (PRDA1)","PEP-RELATED DEVELOPMENT ARRESTED 1 (PRDA1)"]
["AT2G33150","pink","Encodes an organellar (peroxisome, glyoxysome) 3-ketoacyl-CoA thiolase, involved in fatty acid b-oxidation during germination and subsequent seedling growth. Mutants have defects in glyoxysomal fatty acid beta-oxidation. EC2.3.1.16 thiolase.","PEROXISOMAL 3-KETOACYL-COA THIOLASE 3 (PKT3)","PEROXISOMAL 3-KETOACYL-COA THIOLASE 3 (PKT3);PEROXISOME DEFECTIVE 1 (PED1);3-KETOACYL-COA THIOLASE 2 (KAT2);POTASSIUM CHANNEL IN ARABIDOPSIS THALIANA 2 (KAT2)"]
["AT4G20010","pink","Organellar Single-stranded DNA Binding protein. Decreases MMEJ on long ssDNA templates.","PLASTID TRANSCRIPTIONALLY ACTIVE 9 (PTAC9)","PLASTID TRANSCRIPTIONALLY ACTIVE 9 (PTAC9);ORGANELLAR SINGLE-STRANDED DNA BINDING PROTEIN 2 (OSB2)"]
["AT3G27280","pink","Part of protein complexes that are necessary for proficient mitochondrial function or biogenesis, thereby supporting cell division and differentiation in apical tissues","PROHIBITIN 4 (PHB4)","PROHIBITIN 4 (ATPHB4);PROHIBITIN 4 (PHB4); (TIM15-3)"]
["AT3G16810","pink","Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.","PUMILIO 24 (PUM24)","PUMILIO 24 (APUM24);PUMILIO 24 (PUM24)"]
["AT3G22330","pink","DEAD-box protein required for efficient group II intron splicing in mitochondria.","PUTATIVE MITOCHONDRIAL RNA HELICASE 2 (PMH2)","PUTATIVE MITOCHONDRIAL RNA HELICASE 2 (PMH2); (ATRH53)"]
["AT2G45280","pink","Encodes a protein similar to RAD51C involved in double stranded break repair via homologous recombination. Sensitive to DSB induced by Mitomycin C and gamma irradiation, interacts with Atxrcc3 in yeast two-hybrid assay. Required for female meiosis but not critical for mitosis under normal conditions.","RAS ASSOCIATED WITH DIABETES PROTEIN 51C (RAD51C)","RAS ASSOCIATED WITH DIABETES PROTEIN 51C (RAD51C)"]
["AT3G55510","pink","Encodes a regulator of floral determinacy in that interacts with both nucleolar and nucleoplasmic proteins.","REBELOTE (RBL)","REBELOTE (RBL)"]
["AT3G13160","pink","Ribosomal pentatricopeptide repeat protein","RIBOSOMAL PENTATRICOPEPTIDE REPEAT PROTEIN 3B (RPPR3B)","RIBOSOMAL PENTATRICOPEPTIDE REPEAT PROTEIN 3B (RPPR3B);RIBOSOMAL PROTEIN MS79 (MS79)"]
["AT1G16740","pink","Ribosomal protein L20;(source:Araport11)","RIBOSOMAL PROTEIN BL20M (BL20M)","RIBOSOMAL PROTEIN BL20M (BL20M)"]
["AT4G36680","pink","Ribosomal pentatricopeptide repeat protein","RIBOSOMAL PENTATRICOPEPTIDE REPEAT PROTEIN 7 (RPPR7)","RIBOSOMAL PROTEIN ML103 (ML103);RIBOSOMAL PENTATRICOPEPTIDE REPEAT PROTEIN 7 (RPPR7)"]
["AT1G64600","pink","copper ion binding / methyltransferase;(source:Araport11)","RIBOSOMAL PROTEIN MS22 (MS22)","RIBOSOMAL PROTEIN MS22 (MS22)"]
["AT3G02650","pink","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","RIBOSOMAL PROTEIN MS80 (MS80)","RIBOSOMAL PROTEIN MS80 (MS80)"]
["AT5G15980","pink","Ribosomal pentatricopeptide repeat protein","RIBOSOMAL PENTATRICOPEPTIDE REPEAT PROTEIN 8 (RPPR8)","RIBOSOMAL PROTEIN MS81 (MS81);RIBOSOMAL PENTATRICOPEPTIDE REPEAT PROTEIN 8 (RPPR8)"]
["AT1G53645","pink","hydroxyproline-rich glycoprotein family protein;(source:Araport11)","RIBOSOMAL PROTEIN MS85 (MS85)","RIBOSOMAL PROTEIN MS85 (MS85)"]
["AT2G20060","pink","Ribosomal protein L4/L1 family;(source:Araport11)","RIBOSOMAL PROTEIN UL4M (UL4M)","RIBOSOMAL PROTEIN UL4M (UL4M)"]
["AT3G07750","pink","3-5-exoribonuclease family protein;(source:Araport11)","RIBOSOMAL RNA PROCESSING 42 (RRP42)","RIBOSOMAL RNA PROCESSING 42 (RRP42)"]
["AT5G38720","pink","RRP7 shares limited sequence similarity to human and yeast RRP7. In Arabidopsis RRP7 functions in 18S ribosomal RNA maturation.","RIBOSOMAL RNA PROCESSING7 I (RRP7)","RIBOSOMAL RNA PROCESSING7 I (RRP7)"]
["AT3G16840","pink","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","RNA HELICASE 13 (RH13)","RNA HELICASE 13 (RH13)"]
["AT5G40490","pink","HLP1 is a member of the conserved hnRNP A/B family and contains RNA Recognition Motifs (RRM).It binds mRNA and appears to be involved in targeting alternative polyadenylation (APA). APA targets include genes involved in flowering. Loss of HLP1 function results causes late flowering under long and short day conditions. This phenotype is suppressed by loss of FLC.","(HLP1)","RNA-BINDING GLYCINE-RICH PROTEIN D5 (RBGD5); (HLP1)"]
["AT1G47490","pink","RNA-binding protein 47C;(source:Araport11)","RNA-BINDING PROTEIN 47C (RBP47C)","RNA-BINDING PROTEIN 47C (ATRBP47C);RNA-BINDING PROTEIN 47C (RBP47C)"]
["AT1G47500","pink","RNA-binding protein 47C;(source:Araport11)","RNA-BINDING PROTEIN 47C' (RBP47C')","RNA-BINDING PROTEIN 47C' (ATRBP47C');RNA-BINDING PROTEIN 47C' (RBP47C')"]
["AT3G15000","pink","Encodes RIP1 (RNA-editing factor interacting protein 1). Involved in chloroplast and mitochondrial RNA editing. The mRNA is cell-to-cell mobile.","RNA-EDITING FACTOR INTERACTING PROTEIN 1 (RIP1)","RNA-EDITING FACTOR INTERACTING PROTEIN 1 (RIP1);MULTIPLE ORGANELLAR RNA EDITING FACTOR 8 (MORF8)"]
["AT4G00026","pink","Encodes SD3 (Segregation Distortion 3), a protein with high similarity to yeast translocase on the inner mitochondrial membrane 21 (TIM21). sd3 mutants show seedling-lethal phenotype in light-grown seedlings and shorter hypocotyls in dark-grown seedlings. SD3 overexpression plants show increase in cell number and cell size, as well as elevated ATP level.","SEGREGATION DISTORTION 3 (SD3)","SEGREGATION DISTORTION 3 (SD3)"]
["AT1G55040","pink","SED1 is a protein of unknown function that is located in the mitochondrion. sed1 mutants are embryo lethal.","SLOW EMBRYO DEVELOPMENT1 (SED1)","SLOW EMBRYO DEVELOPMENT1 (SED1);ORGANELLE ZINC FINGER 2 (OZ2)"]
["AT5G05540","pink","small RNA degrading nuclease 2;(source:Araport11)","SMALL RNA DEGRADING NUCLEASE 2 (SDN2)","SMALL RNA DEGRADING NUCLEASE 2 (SDN2)"]
["AT1G76300","pink","snRNP core protein SMD3;(source:Araport11)","SNRNP CORE PROTEIN SMD3 (SMD3A)","SNRNP CORE PROTEIN SMD3 (SMD3A)"]
["AT2G20610","pink","Confers auxin overproduction. Mutants have an over-proliferation of lateral roots. Encodes a C-S lyase involved in converting S-alkylthiohydroximate to thiohydroximate in glucosinolate biosynthesis. Induced in epidermal cells attacked by powdery mildew. The RTY enzyme is expected to function as a dimer (or a higher order multimeric complex), as all RTY-related enzymes with a defined crystal structure are known to form dimers or tetramers.","SUPERROOT 1 (SUR1)","SUPERROOT 1 (SUR1);HOOKLESS 3 (HLS3);ROOTY (RTY);ABERRANT LATERAL ROOT FORMATION 1 (ALF1);ROOTY 1 (RTY1)"]
["AT3G06730","pink","Encodes a plastidial thioredoxin (TRX) isoform that defines a branch of plastidial TRXs lying between x- and y-type TRXs and thus was named TRX z. Possesses disulfide reductase activity in vitro. TRX z was previously named as Trx p (thioredoxin putative and plastidic) before its thioredoxin activity was confirmed (Meng et al., PNAS 2010, 107:3900). Knockout mutant of TRX z has a severe albino phenotype and is inhibited in chloroplast development. Two fructokinase-like proteins (FLN1 and FLN2), members of the pfkB-carbohydrate kinase family, are potential TRX z targets.","THIOREDOXIN Z (TRX z)","THIOREDOXIN PUTATIVE PLASTIDIC (TRX P);THIOREDOXIN Z (TRX z); (PAP10)"]
["AT1G61570","pink","Encodes a putative small zinc finger-like protein (TIM13); nucleus-encoded gene whose product is found in the mitochondrial inner membrane space.","TRANSLOCASE OF THE INNER MITOCHONDRIAL MEMBRANE 13 (TIM13)","TRANSLOCASE OF THE INNER MITOCHONDRIAL MEMBRANE 13 (TIM13)"]
["AT4G26600","pink","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)","(NOP2B)","TRNA METHYLTRANSFERASE 4D (TRM4D); (NOP2B); (ATTRM4D)"]
["AT4G04670","pink","Met-10+ like family protein / kelch repeat-containing protein;(source:Araport11)","TRNA METHYLTRANSFERASE 5C (TRM5C)","TRNA METHYLTRANSFERASE 5C (TRM5C); (ATTRM5C)"]
["AT5G14600","pink","Part of complex with TRM6, plays a critical role in maintaining the stability of initiator methionyl-tRNA, embryo and endosperm development. In the complex TRM61 functions as the catalytic subunit, and TRM6 performs the role of the binding subunit","TRNA METHYLTRANSFERASE 61 (TRM61)","TRNA METHYLTRANSFERASE 61 (TRM61); (ATTRM61)"]
["AT1G52160","pink","Encodes a tRNase Z.","TRNASE Z3 (TRZ3)","TRNASE Z3 (TRZ3)"]
["AT4G21520","pink","WD40 repeat protein; wrap53 mutations attenuate the hyper-GFP phenotype in young coi1 wrap53 seedlings.","TELOMERASE CAJAL BODY PROTEIN 1 (TCAB1)","WD REPEAT CONTAINING ANTISENSE TO TP53 (WRAP53);TELOMERASE CAJAL BODY PROTEIN 1 (TCAB1)"]
["AT5G57240","purple","OSBP(oxysterol binding protein)-related protein 4C;(source:Araport11)"]
["AT2G39270","purple","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT3G26850","purple","histone-lysine N-methyltransferase;(source:Araport11)"]
["AT1G32410","purple","Vacuolar protein sorting 55 (VPS55) family protein;(source:Araport11)"]
["AT1G63370","purple","Flavin-binding monooxygenase family protein;(source:Araport11)"]
["AT1G70620","purple","cyclin-like protein;(source:Araport11)"]
["AT3G03150","purple","hypothetical protein;(source:Araport11)"]
["AT4G39366","purple","snoRNA;(source:Araport11)"]
["AT3G58200","purple","TRAF-like family protein;(source:Araport11)"]
["AT4G32140","purple","EamA-like transporter family;(source:Araport11)"]
["AT4G03340","purple","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT4G02430","purple","Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926."]
["AT1G67410","purple","Exostosin family protein;(source:Araport11)"]
["AT5G63130","purple","Octicosapeptide/Phox/Bem1p family protein;(source:Araport11)"]
["AT2G41170","purple","F-box family protein;(source:Araport11)"]
["AT3G25950","purple","TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein;(source:Araport11)"]
["AT1G04350","purple","encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase"]
["AT4G21740","purple","transmembrane protein;(source:Araport11)"]
["AT1G73350","purple","ankyrin repeat protein;(source:Araport11)"]
["AT5G49015","purple","Expressed protein;(source:Araport11)"]
["AT1G13830","purple","Carbohydrate-binding X8 domain superfamily protein;(source:Araport11)"]
["AT5G05435","purple","Natural antisense transcript overlaps with AT5G05430;(source:Araport11)"]
["AT4G17483","purple","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT2G17705","purple","methionine-S-oxide reductase;(source:Araport11)"]
["AT2G41380","purple","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT5G20940","purple","Glycosyl hydrolase family protein;(source:Araport11)"]
["AT2G32660","purple","receptor like protein 22;(source:Araport11)"]
["AT1G60545","purple","Natural antisense transcript overlaps with AT1G60540;(source:Araport11)"]
["AT2G16660","purple","Major facilitator superfamily protein;(source:Araport11)"]
["AT3G26100","purple","Regulator of chromosome condensation (RCC1) family protein;(source:Araport11)"]
["AT3G51895","purple","Encodes a chloroplast-localized sulfate transporter."]
["AT5G03830","purple","CDK inhibitor P21 binding protein;(source:Araport11)"]
["AT4G33820","purple","Glycosyl hydrolase superfamily protein;(source:Araport11)"]
["AT3G09950","purple","hypothetical protein;(source:Araport11)"]
["AT5G50080","purple","encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain and is phosphorylated in planta. There are 7 members in this subfamily."]
["AT4G08230","purple","glycine-rich protein;(source:Araport11)"]
["AT2G43780","purple","cytochrome oxidase assembly protein;(source:Araport11)"]
["AT5G09480","purple","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT5G19850","purple","Putative hydrolase"]
["AT3G04180","purple","RmlC-like cupins superfamily protein;(source:Araport11)"]
["AT1G80165","purple","cotton fiber protein;(source:Araport11)"]
["AT2G40780","purple","Nucleic acid-binding, OB-fold-like protein;(source:Araport11)"]
["AT5G63905","purple","transmembrane protein;(source:Araport11)"]
["AT3G26440","purple","transmembrane protein, putative (DUF707);(source:Araport11)"]
["AT5G47530","purple","Auxin-responsive family protein;(source:Araport11)"]
["AT5G35460","purple","membrane protein;(source:Araport11)"]
["AT1G28250","purple","transmembrane protein;(source:Araport11)"]
["AT2G21190","purple","ER lumen protein retaining receptor family protein;(source:Araport11)"]
["AT3G28140","purple","RNA ligase/cyclic nucleotide phosphodiesterase family protein;(source:Araport11)"]
["AT2G23120","purple","Late embryogenesis abundant protein, group 6;(source:Araport11)"]
["AT5G42930","purple","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT4G34320","purple","transmembrane protein, putative (DUF677);(source:Araport11)"]
["AT4G37530","purple","Peroxidase superfamily protein;(source:Araport11)"]
["AT3G62730","purple","desiccation-like protein;(source:Araport11)"]
["AT4G24275","purple","Identified as a screen for stress-responsive genes."]
["AT1G18560","purple","BED zinc finger and hAT dimerization domain-containing protein;(source:Araport11)"]
["AT1G21200","purple","sequence-specific DNA binding transcription factor;(source:Araport11)"]
["AT1G08530","purple","chitinase-like protein;(source:Araport11)"]
["AT3G05170","purple","Phosphoglycerate mutase family protein;(source:Araport11)"]
["AT1G33360","purple","Encodes ClpX3, a subunit of the Clp protease complex."]
["AT5G41685","purple","Mitochondrial outer membrane translocase complex, subunit Tom7;(source:Araport11)"]
["AT4G21215","purple","transmembrane protein;(source:Araport11)"]
["AT5G38210","purple","Protein kinase family protein;(source:Araport11)"]
["AT1G04778","purple","hypothetical protein;(source:Araport11)"]
["AT4G29020","purple","glycine-rich protein;(source:Araport11)"]
["AT1G11170","purple","lysine ketoglutarate reductase trans-splicing-like protein (DUF707);(source:Araport11)"]
["AT1G76020","purple","Thioredoxin superfamily protein;(source:Araport11)"]
["AT5G58530","purple","Glutaredoxin family protein;(source:Araport11)"]
["AT3G25290","purple","Auxin-responsive family protein;(source:Araport11)"]
["AT2G23210","purple","UDP-Glycosyltransferase superfamily protein;(source:Araport11)"]
["AT3G51990","purple","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G16820","purple","vacuolar ATP synthase catalytic subunit-related / V-ATPase-related / vacuolar proton pump-like protein;(source:Araport11)"]
["AT5G02740","purple","Ribosomal protein S24e family protein;(source:Araport11)"]
["AT2G17350","purple","beta-mannosyltransferase-like protein;(source:Araport11)"]
["AT4G21902","purple","hypothetical protein;(source:Araport11)"]
["AT4G14230","purple","CBS domain protein with a domain protein (DUF21);(source:Araport11)"]
["AT5G13760","purple","Plasma-membrane choline transporter family protein;(source:Araport11)"]
["AT3G15395","purple","HrpN-interacting protein from malus protein;(source:Araport11)"]
["AT2G25770","purple","Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11)"]
["AT2G18370","purple","Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15."]
["AT2G20010","purple","Gls protein (DUF810);(source:Araport11)"]
["AT5G40690","purple","histone-lysine N-methyltransferase trithorax-like protein;(source:Araport11)"]
["AT1G56612","purple","Natural antisense transcript overlaps with AT1G56610;(source:Araport11)"]
["AT5G56240","purple","hapless protein;(source:Araport11)"]
["AT1G49740","purple","PLC-like phosphodiesterases superfamily protein;(source:Araport11)"]
["AT1G09794","purple","Cox19 family protein (CHCH motif);(source:Araport11)"]
["AT1G71865","purple","PyrD;(source:Araport11)"]
["AT2G46735","purple","death domain associated protein;(source:Araport11)"]
["AT1G64270","purple","transposable_element_gene;(source:Araport11);Mutator-like transposase family, has a 1.0e-06 P-value blast match to GB:AAA21566 mudrA of transposon=MuDR (MuDr-element) (Zea mays);(source:TAIR10)"]
["AT5G47130","purple","Bax inhibitor-1 family protein;(source:Araport11)"]
["AT4G18580","purple","hypothetical protein;(source:Araport11)"]
["AT4G13270","purple","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11)"]
["AT1G17490","purple","epidermal patterning factor-like protein;(source:Araport11)"]
["AT4G35150","purple","O-methyltransferase family protein;(source:Araport11)"]
["AT2G38380","purple","Peroxidase superfamily protein;(source:Araport11)"]
["AT1G22140","purple","zinc finger CCCH domain protein;(source:Araport11)"]
["AT3G60780","purple","hypothetical protein (DUF1442);(source:Araport11)"]
["AT3G18535","purple",0]
["AT2G38260","purple","Probably not a pseudogene based on evidence for transcription (RNA-seq) and translation (Ribo-seq) described in PMID:27791167"]
["AT2G19340","purple","Oligosaccharyltransferase complex/magnesium transporter family protein;(source:Araport11)"]
["AT2G03430","purple","Ankyrin repeat family protein;(source:Araport11)"]
["AT3G24820","purple","BSD domain-containing protein;(source:Araport11)"]
["AT3G52950","purple","CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein;(source:Araport11)"]
["AT2G44260","purple","DUF946 family protein (DUF946);(source:Araport11)"]
["AT2G05910","purple","LURP-one-like protein (DUF567);(source:Araport11)"]
["AT4G16680","purple","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT1G32700","purple","PLATZ transcription factor family protein;(source:Araport11)"]
["AT3G27200","purple","Cupredoxin superfamily protein;(source:Araport11)"]
["AT5G43260","purple","chaperone protein dnaJ-like protein;(source:Araport11)"]
["AT4G12760","purple","RPA-interacting protein A;(source:Araport11)"]
["AT3G17250","purple","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT5G63135","purple","transcription termination factor;(source:Araport11)"]
["AT2G03800","purple","encodes a D-aminoacyl-tRNA deacylase. Involved in detoxification of D-aminoacyl-tRNA. Mutants also show ethanol-hypersensitive phenotype."]
["AT3G04170","purple","RmlC-like cupins superfamily protein;(source:Araport11)"]
["AT1G52565","purple","cytochrome P450 family protein;(source:Araport11)"]
["AT1G71910","purple","hypothetical protein;(source:Araport11)"]
["AT1G32220","purple","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT1G08315","purple","ARM repeat superfamily protein;(source:Araport11)"]
["AT1G73750","purple","alpha/beta hydrolase family protein;(source:Araport11)"]
["AT2G17140","purple","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G17190","purple","B-cell receptor-associated-like protein;(source:Araport11)"]
["AT5G45320","purple","late embryogenesis abundant protein;(source:Araport11)"]
["AT1G77260","purple","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT1G15030","purple","Encodes a Cysteine-rich peptide (CRP) family protein"]
["AT2G15830","purple","hypothetical protein;(source:Araport11)"]
["AT2G37195","purple","acyl-CoA-binding domain protein;(source:Araport11)"]
["AT5G57060","purple","60S ribosomal L18a-like protein;(source:Araport11)"]
["AT1G64385","purple","transmembrane protein;(source:Araport11)"]
["AT5G25360","purple","hypothetical protein;(source:Araport11)"]
["AT1G54320","purple","LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein;(source:Araport11)"]
["AT3G15430","purple","Regulator of chromosome condensation (RCC1) family protein;(source:Araport11)"]
["AT1G52660","purple","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT3G55640","purple","Mitochondrial substrate carrier family protein;(source:Araport11)"]
["AT3G07550","purple","RNI-like superfamily protein;(source:Araport11)"]
["AT5G19060","purple","cytochrome P450 family protein;(source:Araport11)"]
["AT5G60460","purple","Preprotein translocase Sec, Sec61-beta subunit protein;(source:Araport11)"]
["AT5G52882","purple","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT5G52880","purple","F-box family protein;(source:Araport11)"]
["AT1G62370","purple","RING/U-box superfamily protein;(source:Araport11)"]
["AT2G22270","purple","hematological/neurological-like protein;(source:Araport11)"]
["AT1G11940","purple","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT1G19380","purple","sugar, putative (DUF1195);(source:Araport11)"]
["AT1G10040","purple","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT2G46060","purple","transmembrane protein-like protein;(source:Araport11)"]
["AT1G09500","purple","similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase"]
["AT4G01593","purple","Natural antisense transcript overlaps with AT4G01595;(source:Araport11)"]
["AT2G38250","purple","Homeodomain-like superfamily protein;(source:Araport11)"]
["AT4G16770","purple","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT5G47330","purple","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT5G40640","purple","transmembrane protein;(source:Araport11)"]
["AT5G64190","purple","neuronal PAS domain protein;(source:Araport11)"]
["AT2G03667","purple","Asparagine synthase family protein;(source:Araport11)"]
["AT5G17780","purple","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT1G20730","purple","Protein of unknown function (DUF833).Maternally expressed in some lineages."]
["AT5G24980","purple","transmembrane protein;(source:Araport11)"]
["AT3G62750","purple","Encodes a putative beta glucosidase, expressed in the peroxisome."]
["AT1G54740","purple","FANTASTIC four-like protein (DUF3049);(source:Araport11)"]
["AT5G21090","purple","Leucine-rich repeat (LRR) family protein;(source:Araport11)"]
["AT1G61240","purple","lysine ketoglutarate reductase trans-splicing-like protein (DUF707);(source:Araport11)"]
["AT1G23640","purple","OBP32pep protein;(source:Araport11)"]
["AT3G18560","purple","hypothetical protein;(source:Araport11)"]
["AT4G26490","purple","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11)"]
["AT5G49610","purple","F-box family protein;(source:Araport11)"]
["AT1G31460","purple","vitellogenin-2 protein;(source:Araport11)"]
["AT5G02480","purple","HSP20-like chaperones superfamily protein;(source:Araport11)"]
["AT1G16180","purple","Serinc-domain containing serine and sphingolipid biosynthesis protein;(source:Araport11)"]
["AT1G51035","purple","hypothetical protein;(source:Araport11)"]
["AT1G77885","purple","hypothetical protein;(source:Araport11)"]
["AT1G30600","purple","Subtilase family protein;(source:Araport11)"]
["AT1G14520","purple","Encodes MIOX1. Belongs to myo-inositol oxygenase gene family."]
["AT1G67325","purple","Ran BP2/NZF zinc finger-like superfamily protein;(source:Araport11)"]
["AT4G18372","purple","Small nuclear ribonucleoprotein family protein;(source:Araport11)"]
["AT1G73810","purple","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT5G65120","purple","DNA-directed RNA polymerase subunit beta;(source:Araport11)"]
["AT3G53730","purple","Histone superfamily protein;(source:Araport11)"]
["AT5G23490","purple","hypothetical protein;(source:Araport11)"]
["AT3G51250","purple","Senescence/dehydration-associated protein-like protein;(source:Araport11)"]
["AT3G30841","purple","Cofactor-independent phosphoglycerate mutase;(source:Araport11)"]
["AT5G01470","purple","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT3G50050","purple","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT1G53100","purple","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT5G62150","purple","peptidoglycan-binding LysM domain-containing protein;(source:Araport11)"]
["AT4G23330","purple","hypothetical protein;(source:Araport11)"]
["AT4G27050","purple","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT5G49710","purple","RING finger protein;(source:Araport11)"]
["AT1G73440","purple","calmodulin-like protein;(source:Araport11)"]
["AT1G20225","purple","Thioredoxin superfamily protein;(source:Araport11)"]
["AT5G23750","purple","Remorin family protein;(source:Araport11)"]
["AT2G21510","purple","DNAJ heat shock N-terminal domain-containing protein;(source:Araport11)"]
["AT3G26950","purple","transmembrane protein;(source:Araport11)"]
["AT5G47920","purple","transcription elongation factor;(source:Araport11)"]
["AT1G80120","purple","LURP-one-like protein (DUF567);(source:Araport11)"]
["AT5G49900","purple","Beta-glucosidase, GBA2 type family protein;(source:Araport11)"]
["AT5G35680","purple","Nucleic acid-binding, OB-fold-like protein;(source:Araport11)"]
["AT3G15890","purple","Protein kinase superfamily protein;(source:Araport11)"]
["AT5G03330","purple","Cysteine proteinases superfamily protein;(source:Araport11)"]
["AT3G05940","purple","organic solute transporter ostalpha protein (DUF300);(source:Araport11)"]
["AT5G67140","purple","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT2G38900","purple","Predicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860."]
["AT2G46030","purple","Ubiquitin conjugating enzyme E2"]
["AT3G63050","purple","hypothetical protein;(source:Araport11)"]
["AT4G16745","purple","Exostosin family protein;(source:Araport11)"]
["AT1G23040","purple","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT1G14590","purple","Nucleotide-diphospho-sugar transferase family protein;(source:Araport11)"]
["AT1G52630","purple","O-fucosyltransferase family protein;(source:Araport11)"]
["AT2G17710","purple","Big1;(source:Araport11)"]
["AT2G38730","purple","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11)"]
["AT2G02870","purple","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT3G14780","purple","callose synthase;(source:Araport11)"]
["AT1G14990","purple","transmembrane protein;(source:Araport11)"]
["AT2G18480","purple","Major facilitator superfamily protein;(source:Araport11)"]
["AT1G11910","purple","Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8)."]
["AT2G25460","purple","EEIG1/EHBP1 protein amino-terminal domain protein;(source:Araport11)"]
["AT4G12000","purple","SNARE associated Golgi protein family;(source:Araport11)"]
["AT3G21610","purple","Acid phosphatase/vanadium-dependent haloperoxidase-related protein;(source:Araport11)"]
["AT2G41040","purple","Methyltransferase, located in chloroplast, involved in response to karrikin."]
["AT4G30900","purple","DNAse I-like superfamily protein;(source:Araport11)"]
["AT5G51260","purple","HAD superfamily, subfamily IIIB acid phosphatase;(source:Araport11)"]
["AT2G21187","purple","Natural antisense transcript overlaps with AT2G21185;(source:Araport11)"]
["AT5G65290","purple","LMBR1-like membrane protein;(source:Araport11)"]
["AT3G44205","purple","transposable_element_gene;(source:Araport11);Mutator-like transposase family, has a 1.5e-40 P-value blast match to GB:AAA21566 mudrA of transposon=MuDR (MuDr-element) (Zea mays);(source:TAIR10)"]
["AT4G22380","purple","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11)"]
["AT2G36300","purple","Integral membrane Yip1 family protein;(source:Araport11)"]
["AT3G05160","purple","Major facilitator superfamily protein;(source:Araport11)"]
["AT2G31751","purple","Potential natural antisense gene, locus overlaps with AT2G31750"]
["AT5G53930","purple","transcriptional regulator ATRX-like protein;(source:Araport11)"]
["AT4G18300","purple","Trimeric LpxA-like enzyme;(source:Araport11)"]
["AT4G21192","purple","Cytochrome c oxidase biogenesis protein Cmc1-like protein;(source:Araport11)"]
["AT1G19010","purple","hypothetical protein;(source:Araport11)"]
["AT3G04150","purple","RmlC-like cupins superfamily protein;(source:Araport11)"]
["AT5G18780","purple","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT5G46080","purple","Protein kinase superfamily protein;(source:Araport11)"]
["AT5G05380","purple","prenylated RAB acceptor 1.B3;(source:Araport11)"]
["AT2G27020","purple","Encodes 20S proteasome alpha 7 subunit PAG1."]
["AT1G01250","purple","encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY."]
["AT3G44280","purple","peptidyl-prolyl cis-trans isomerase G;(source:Araport11)"]
["AT5G10770","purple","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT1G54680","purple","translation initiation factor 3 subunit I;(source:Araport11)"]
["AT2G35360","purple","ubiquitin family protein;(source:Araport11)"]
["AT4G22758","purple","PPR containing protein;(source:Araport11)"]
["AT1G55160","purple","WAS/WASL-interacting family protein;(source:Araport11)"]
["AT3G58780","purple","One of two genes (SHP1 and SHP2) that are required for fruit dehiscence. The two genes control dehiscence zone differentiation and promote the lignification of adjacent cells."]
["AT1G68380","purple","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT5G08480","purple","VQ motif-containing protein;(source:Araport11)"]
["AT4G16790","purple","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT3G04310","purple","transmembrane protein;(source:Araport11)"]
["AT2G40460","purple","Major facilitator superfamily protein;(source:Araport11)"]
["AT3G07570","purple","Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein;(source:Araport11)"]
["AT3G52110","purple","interferon-activable protein;(source:Araport11)"]
["AT5G03460","purple","transmembrane protein;(source:Araport11)"]
["AT1G13630","purple","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G19250","purple","pseudogene of ALBINA 1;(source:Araport11)"]
["AT1G62225","purple","transmembrane protein;(source:Araport11)"]
["AT1G15825","purple","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT2G26100","purple","Galactosyltransferase family protein;(source:Araport11)"]
["AT4G10430","purple","TMPIT-like protein;(source:Araport11)"]
["AT4G28690","purple","hypothetical protein;(source:Araport11)"]
["AT5G27860","purple","hypothetical protein;(source:Araport11)"]
["AT5G54830","purple","DOMON domain-containing protein / dopamine beta-monooxygenase N-terminal domain-containing protein;(source:Araport11)"]
["AT4G02005","purple","None;(source:Araport11)"]
["AT1G16515","purple","transmembrane protein;(source:Araport11)"]
["AT1G15160","purple","MATE efflux family protein;(source:Araport11)"]
["AT5G37930","purple","Protein with RING/U-box and TRAF-like domain;(source:Araport11)"]
["AT2G18240","purple","Rer1 family protein;(source:Araport11)"]
["AT1G22410","purple","Class-II DAHP synthetase family protein;(source:Araport11)"]
["AT1G62610","purple","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT2G23760","purple","Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw2 and saw1 may act redundantly to repress BP in leaves. Regulates together with BLH2 demethylesterification of homogalacturonan in seed mucilage."]
["AT3G15750","purple","Essential protein Yae1, N-terminal;(source:Araport11)"]
["AT2G02960","purple","RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11)"]
["AT5G35995","purple","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT5G44060","purple","embryo sac development arrest protein;(source:Araport11)"]
["AT2G31990","purple","Exostosin family protein;(source:Araport11)"]
["AT4G07390","purple","Mannose-P-dolichol utilization defect 1 protein;(source:Araport11)"]
["AT5G03660","purple","transcriptional activator (DUF662);(source:Araport11)"]
["AT4G00980","purple","zinc knuckle (CCHC-type) family protein;(source:Araport11)"]
["AT5G43210","purple","Excinuclease ABC, C subunit, N-terminal;(source:Araport11)"]
["AT2G01021","purple","hypothetical protein;(source:Araport11)"]
["AT4G19380","purple","Long-chain fatty alcohol dehydrogenase family protein;(source:Araport11)"]
["AT2G37980","purple","O-fucosyltransferase family protein;(source:Araport11)"]
["AT2G13130","purple","pseudogene of F-box and associated interaction domains-containing protein;(source:Araport11)"]
["AT3G23090","purple","Member of the microtubule regulatory protein WVD2/WDL family WDL3 stabilizes cortical microtubules and is involved in light induced hypocotyl elongation. WDL3 is ubiquinated by COP1, leading to its degadation in the dark,"]
["AT1G23220","purple","Dynein light chain type 1 family protein;(source:Araport11)"]
["AT4G10360","purple","TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein;(source:Araport11)"]
["AT2G45860","purple","hypothetical protein;(source:Araport11)"]
["AT4G00530","purple","UvrABC system protein A;(source:Araport11)"]
["AT2G43465","purple","RNA-binding ASCH domain protein;(source:Araport11)"]
["AT1G54260","purple","winged-helix DNA-binding transcription factor family protein;(source:Araport11)"]
["AT2G22100","purple","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT5G58005","purple","Cytochrome c oxidase, subunit Vib family protein;(source:Araport11)"]
["AT1G32610","purple","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT1G63380","purple","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT2G15730","purple","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT4G02340","purple","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT3G04970","purple","DHHC-type zinc finger family protein;(source:Araport11)"]
["AT1G80940","purple","Snf1 kinase interactor-like protein;(source:Araport11)"]
["AT2G45245","purple","other_RNA;(source:Araport11)"]
["AT5G06440","purple","polyketide cyclase/dehydrase/lipid transport superfamily protein;(source:Araport11)"]
["AT2G24755","purple","Natural antisense transcript overlaps with AT2G24750 and AT2G24760;(source:Araport11)"]
["AT1G54957","purple","transmembrane protein;(source:Araport11)"]
["AT4G32440","purple","Plant Tudor-like RNA-binding protein;(source:Araport11)"]
["AT1G49360","purple","F-box family protein;(source:Araport11)"]
["AT5G35450","purple","Disease resistance protein (CC-NBS-LRR class) family;(source:Araport11)"]
["AT5G43180","purple","transmembrane protein, putative (Protein of unknown function, DUF599);(source:Araport11)"]
["AT1G16220","purple","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT2G44798","purple","Natural antisense transcript overlaps with AT2G44800;(source:Araport11)"]
["AT5G53310","purple","myosin heavy chain-like protein;(source:Araport11)"]
["AT1G33700","purple","Beta-glucosidase, GBA2 type family protein;(source:Araport11)"]
["AT1G18210","purple","Calcium-binding EF-hand family protein;(source:Araport11)"]
["AT1G03250","purple","R3H domain protein involved in ribosome biogenesis."]
["AT4G21410","purple","Encodes a cysteine-rich receptor-like protein kinase."]
["AT4G37520","purple","Peroxidase superfamily protein;(source:Araport11)"]
["AT2G41400","purple","Pollen Ole e 1 allergen and extensin family protein;(source:Araport11)"]
["AT3G07280","purple","None;(source:Araport11)"]
["AT2G35738","purple","Natural antisense transcript overlaps with AT2G35740;(source:Araport11)"]
["AT4G29780","purple","Expression of the gene is affected by multiple stresses. Knockout and overexpression lines show no obvious phenotypes."]
["AT2G47120","purple","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT4G10170","purple","SNARE-like superfamily protein;(source:Araport11).Maps near a QTL for seed oil chain length QTL."]
["AT3G41979","purple","5.8SrRNA"]
["AT1G28710","purple","Nucleotide-diphospho-sugar transferase family protein;(source:Araport11)"]
["AT3G11800","purple","Expp1 protein;(source:Araport11)"]
["AT4G16957","purple","SUPPRESSOR OF, CONSTITUTIVE protein;(source:Araport11)"]
["AT3G14560","purple","Its transcript is targeted by miR824."]
["AT3G52370","purple","Fasciclin-like arabinogalactan protein. Possibly involved in embryogenesis and seed development."]
["AT3G16330","purple","Avr9/Cf-9 rapidly elicited protein;(source:Araport11)"]
["AT1G26090","purple","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT2G01460","purple","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT3G44100","purple","MD-2-related lipid recognition domain-containing protein;(source:Araport11)"]
["AT3G24490","purple","Alcohol dehydrogenase transcription factor Myb/SANT-like family protein;(source:Araport11)"]
["AT5G10580","purple","plant/protein (Protein of unknown function, DUF599);(source:Araport11)"]
["AT1G20680","purple","transport/golgi organization-like protein (DUF833);(source:Araport11)"]
["AT2G31945","purple","transmembrane protein;(source:Araport11)"]
["AT2G30300","purple","Major facilitator superfamily protein;(source:Araport11)"]
["AT5G54855","purple","Pollen Ole e 1 allergen and extensin family protein;(source:Araport11)"]
["AT5G56980","purple","Pathogen-associated molecular pattern-induced gene.Responsive to jasmonic acid and wounding."]
["AT3G07940","purple","Calcium-dependent ARF-type GTPase activating protein family;(source:Araport11)"]
["AT3G63040","purple","hypothetical protein;(source:Araport11)"]
["AT5G40680","purple","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT1G04555","purple","transmembrane protein;(source:Araport11)"]
["AT2G41390","purple","Pollen Ole e 1 allergen and extensin family protein;(source:Araport11)"]
["AT2G05185","purple","hypothetical protein;(source:Araport11)"]
["AT3G11010","purple","receptor like protein 34;(source:Araport11)"]
["AT5G57400","purple","transmembrane protein;(source:Araport11)"]
["AT3G03070","purple","NADH-ubiquinone oxidoreductase-like protein;(source:Araport11)"]
["AT4G29890","purple","choline monooxygenase, putative (CMO-like);(source:Araport11)"]
["AT1G06050","purple","ENHANCED DISEASE RESISTANCE-like protein (DUF1336);(source:Araport11)"]
["AT3G01340","purple","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT2G39445","purple","Phosphatidylinositol N-acetylglucosaminyltransferase, GPI19/PIG-P subunit;(source:Araport11)"]
["AT5G57565","purple","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G11900","purple","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G56290","purple","potassium transporter;(source:Araport11)"]
["AT4G29590","purple","Putative methyltransferase"]
["AT1G62620","purple","Flavin-binding monooxygenase family protein;(source:Araport11)"]
["AT1G64572","purple","other_RNA;(source:Araport11)"]
["AT1G52510","purple","Hydrolase superfamily protein located in chloroplast."]
["AT4G16470","purple","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G61310","purple","Cytochrome c oxidase subunit Vc family protein;(source:Araport11)"]
["AT3G27210","purple","hypothetical protein;(source:Araport11)"]
["AT1G76230","purple","hypothetical protein;(source:Araport11)"]
["AT3G63280","purple","Encodes AtNek4, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes."]
["AT5G47790","purple","SMAD/FHA domain-containing protein;(source:Araport11)"]
["AT1G10060","purple","encodes a mitochondrial branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant."]
["AT2G40095","purple","Alpha/beta hydrolase related protein;(source:Araport11)"]
["AT5G13890","purple","plant viral-response family protein (DUF716);(source:Araport11)"]
["AT5G12270","purple","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT1G68160","purple","ZZ-type zinc finger protein, putative (DUF3755);(source:Araport11)"]
["AT5G04910","purple","DNA repair REX1-B protein;(source:Araport11)"]
["AT1G61097","purple","Expressed protein;(source:Araport11)"]
["AT3G11780","purple","MD-2-related lipid recognition domain-containing protein / ML domain-containing protein;(source:Araport11)"]
["AT4G34920","purple","PLC-like phosphodiesterases superfamily protein;(source:Araport11)"]
["AT1G31940","purple","cystic fibrosis transmembrane conductance regulator;(source:Araport11)"]
["AT1G66460","purple","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G78140","purple","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT3G04780","purple","Encodes a protein with little sequence identity with any other protein of known structure or function. Part of this protein shows a 42% sequence identity with the C-terminal domain of the 32-kD human thioredoxin-like protein."]
["AT1G55750","purple","BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins);(source:Araport11)"]
["AT2G27240","purple","aluminum activated malate transporter family protein;(source:Araport11)"]
["AT5G47240","purple","nudix hydrolase homolog 8;(source:Araport11)"]
["AT5G50410","purple","ribonucleoside-diphosphate reductase subunit beta;(source:Araport11)"]
["AT4G29950","purple","Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11)"]
["AT3G18620","purple","DHHC-type zinc finger family protein;(source:Araport11)"]
["AT5G11500","purple","coiled-coil protein;(source:Araport11)"]
["AT3G05570","purple","dipeptide transport ATP-binding protein;(source:Araport11)"]
["AT2G17760","purple","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT5G08750","purple","RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11)"]
["AT1G52825","purple","sporulation-specific protein;(source:Araport11)"]
["AT3G22845","purple","emp24/gp25L/p24 family/GOLD family protein;(source:Araport11)"]
["AT1G24430","purple","HXXXD-type acyl-transferase family protein;(source:Araport11)"]
["AT5G42060","purple","DEK, chromatin associated protein;(source:Araport11)"]
["AT3G46000","purple","Encodes depolymerizing factor 2."]
["AT1G20180","purple","transmembrane protein (DUF677);(source:Araport11)"]
["AT4G34140","purple","D111/G-patch domain-containing protein;(source:Araport11)"]
["AT2G16880","purple","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G34844","purple","Natural antisense transcript overlaps with AT1G34842;(source:Araport11)"]
["AT1G17030","purple","hypothetical protein;(source:Araport11)"]
["AT5G24600","purple","TRP-like ion channel protein (Protein of unknown function, DUF599);(source:Araport11)"]
["AT5G49350","purple","Glycine-rich protein family;(source:Araport11)"]
["AT3G04190","purple","RmlC-like cupins superfamily protein;(source:Araport11)"]
["AT1G26208","purple","Natural antisense transcript overlaps with AT1G26210;(source:Araport11)"]
["AT3G09735","purple","S1FA-like DNA-binding protein;(source:Araport11)"]
["AT1G18745","purple","other_RNA;(source:Araport11)"]
["AT2G33585","purple","subtilisin-like protease;(source:Araport11)"]
["AT3G13062","purple","Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11)"]
["AT5G61340","purple","transmembrane protein;(source:Araport11)"]
["AT3G24460","purple","Serinc-domain containing serine and sphingolipid biosynthesis protein;(source:Araport11)"]
["AT5G65840","purple","Thioredoxin superfamily protein;(source:Araport11)"]
["AT5G42660","purple","DNA-directed RNA polymerase subunit beta (DUF616);(source:Araport11)"]
["AT1G62305","purple","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT4G11400","purple","ARID/BRIGHT DNA-binding , ELM2 domain and myb-like DNA-binding domain-containing protein;(source:Araport11)"]
["AT3G22910","purple","ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11)","AUTO-INHIBITED CA2+ ATPASE 13 (ACA13)"]
["AT5G42090","purple","Lung seven transmembrane receptor family protein;(source:Araport11)","(7TM4)","(7TM4)"]
["AT5G24810","purple","Increased tendency to retain introns in smeb mutants under normal or chilling stress condition.","(ABC1K11)","(ABC1K11)"]
["AT1G65950","purple","Protein kinase superfamily protein;(source:Araport11)","(ABC1K14)","(ABC1K14)"]
["AT2G14850","purple","SPT module subunit, interacts with HAG1.","(ADA1A)","(ADA1A)"]
["AT4G33890","purple","Component of SAGA complex, SPT module subunit, interacts with HAG1.","(ADA1B)","(ADA1B)"]
["AT2G24530","purple","Member of SAGA complex, SPT modulu subunit, interacts with HAG1.","(ADA1E)","(ADA1E)"]
["AT5G39730","purple","AIG2-like (avirulence induced gene) family protein;(source:Araport11)","(AIG2LB)","(AIG2LB)"]
["AT5G19140","purple","aluminum induced protein with YGL and LRDR motifs;(source:Araport11)","(AILP1)","(AILP1); (AtAILP1)"]
["AT1G79330","purple","Metacaspase AtMCPb2/AMC6. Caspase family protein. Arginine/lysine-specific cysteine protease activity. Induces apoptosis in yeast. Contains Pfam domain, PF00656: ICE-like protease (caspase) p20 domain. Arabidopsis contains three type I MCP genes (MCP1a-c) and six type II MCP genes (MCP2a?f): AtMCP1a/At5g64240, AtMCP1b/At1g02170, AtMCP1c/At4g25110, AtMCP2a/At1g79310, AtMCP2b/At1g79330, AtMCP2c/At1g79320, AtMCP2d/At1g79340, AtMCP2e/At1g16420, AtMCP2f/At5g04200.","METACASPASE 5 (MC5)","(AMC6);METACASPASE 2B (ATMCP2b);METACASPASE 5 (MC5);METACASPASE 5 (ATMC5);METACASPASE 2B (MCP2b)"]
["AT1G52080","purple","actin binding protein family;(source:Araport11)","(AR791)","(AR791)"]
["AT4G01710","purple","belongs to the DIS(distorted) gene family. Encodes a actin polymerization factor. Involved in cell expansion of trichome.","CROOKED (CRK)","(ARPC5);CROOKED (CRK)"]
["AT1G01020","purple","ARV1 family protein;(source:Araport11)","(ARV1)","(ARV1)"]
["AT4G16640","purple","Matrix metalloprotease.","(AT1-MMP)","(AT1-MMP)"]
["AT3G16340","purple","Encodes a p-coumaryl alcohol exporter involved in lignin biosynthesis.","ATP-BINDING CASSETTE G29 (ABCG29)","(ATABCG29);ATP-BINDING CASSETTE G29 (ABCG29);PLEIOTROPIC DRUG RESISTANCE 1 (ATPDR1);PLEIOTROPIC DRUG RESISTANCE 1 (PDR1)"]
["AT5G56540","purple","Encodes arabinogalactan protein (AGP14). Mutants exhibit longer root hairs. The mRNA is cell-to-cell mobile.","ARABINOGALACTAN PROTEIN 14 (AGP14)","(ATAGP14);ARABINOGALACTAN PROTEIN 14 (AGP14)"]
["AT3G54340","purple","Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies petal and stamen identities. Associates with PISTILLATA.","APETALA 3 (AP3)","(ATAP3);APETALA 3 (AP3)"]
["AT3G47790","purple","ABC2 homolog 7;(source:Araport11)","ATP-BINDING CASSETTE A8 (ABCA8)","(ATATH7);ABC2 HOMOLOG 7 (ATH7);ATP-BINDING CASSETTE A8 (ABCA8)"]
["AT1G20823","purple","Encodes a RING E3 ubiquitin ligase ATL80. Involved in phosphate mobilization and cold stress response in sufficient phosphate growth conditions. The mRNA is cell-to-cell mobile.","(ATATL80)","(ATATL80);ARABIDOPSIS T??XICOS EN LEVADURA 80 (ATL80)"]
["AT3G30390","purple","Encodes a putative amino acid transporter.","(ATAVT6)","(ATAVT6)"]
["AT2G34810","purple","FAD-binding Berberine family protein;(source:Araport11)","(ATBBE16)","(ATBBE16)"]
["AT5G44410","purple","FAD-binding Berberine family protein;(source:Araport11)","(ATBBE27)","(ATBBE27)"]
["AT1G30700","purple","FAD-binding Berberine family protein;(source:Araport11)","(ATBBE8)","(ATBBE8)"]
["AT1G12240","purple","Encodes a vacuolar invertase betaFruct4. betaFruct4 is transported from the endoplasmic reticulum through the intermediate compartments as a membrane protein. The N-terminal cytoplasmic domain contains multiple sequence motifs that are involved at various stages in the trafficking of betaFruct4 from the ER to the central vacuole. The mRNA is cell-to-cell mobile.","(ATBETAFRUCT4)","(ATBETAFRUCT4);VACUOLAR INVERTASE (VAC-INV);FRUCTOSIDASE 4 (FRUCT4);VACUOLAR INVERTASE 2 (VIN2);VACUOLAR INVERTASE 2 (VI2); (ATVI2); (ATFRUCT4)"]
["AT1G55730","purple","member of Low affinity calcium antiporter CAX2 family","CATION EXCHANGER 5 (CAX5)","(ATCAX5);CATION EXCHANGER 5 (CAX5)"]
["AT1G16380","purple","member of Putative Na+/H+ antiporter family","(ATCHX1)","(ATCHX1);CATION EXCHANGER 1 (CHX1); (CAX1)"]
["AT5G24930","purple","Flowering repressor in long days (LD) and short days (SD) and acts on the expression of FT and FT-like genes as well as on SUPPRESSOR OF OVEREXPRESSION OF CONSTANS 1 (SOC1).","CONSTANS-LIKE 4 (COL4)","(ATCOL4);B-BOX DOMAIN PROTEIN 5 (BBX5);CONSTANS-LIKE 4 (COL4)"]
["AT5G20650","purple","Encodes COPT5, a member of copper transporter family and functionally complements a high affinity copper transporter mutant in yeast. Plays an important role in the plant response to environmental copper scarcity, probably by remobilizing copper from prevacuolar vesicles, which could act as internal stores or recycling vesicles to provide the metal cofactor to key copper-dependent processes such as photosynthesis.","COPPER TRANSPORTER 5 (COPT5)","(ATCOPT5);COPPER TRANSPORTER 5 (COPT5)"]
["AT5G52050","purple","MATE efflux family protein;(source:Araport11)","DETOXIFICATION EFFLUX CARRIER 50 (DTX50)","(ATDTX50);DETOXIFICATION EFFLUX CARRIER 50 (DTX50)"]
["AT1G14170","purple","RNA-binding KH domain-containing protein;(source:Araport11)","(ATKH2)","(ATKH2)"]
["AT1G80950","purple","Encodes an acyl-CoA: lysophosphatidylethanolamine acyltransferase with 16:0-CoA being the best acyl donor. Mutations adversely affect the growth of plants and result in decreased lipid content in roots and seeds.","LYSOPHOSPHATIDYLETHANOLAMINE ACYLTRANSFERASE1 (LPEAT1)","(ATLPEAT1);LYSOPHOSPHATIDYLETHANOLAMINE ACYLTRANSFERASE1 (LPEAT1)"]
["AT2G38130","purple","Encodes the Arabidopsis homolog of the yeast protein MAK3, a component of the N-terminal acetyltransferase complex C. In mutant plants, synthesis of plastome-encoded photosystem II core proteins D1 and CP47 is affected resulting in fewer thylakoid multiprotein complexes.","(ATMAK3)","(ATMAK3)"]
["AT5G50440","purple","Member of Membrin Gene Family. Encodes a Golgi-localized SNARE protein MEMB12. MEMB12 is a target of miR393b-mediated gene silencing during Pseudomonas syringae pv. Tomato infection. Loss of function of MEMB12 leads to increased exocytosis of an antimicrobial pathogenesis-related protein, PR1.","MEMBRIN 12 (MEMB12)","(ATMEMB12);MEMBRIN 12 (MEMB12)"]
["AT1G48240","purple","member of NPSN Gene Family, TGN/PM localization.","NOVEL PLANT SNARE 12 (NPSN12)","(ATNPSN12);NOVEL PLANT SNARE 12 (NPSN12)"]
["AT1G15960","purple","Member of Nramp2 family. NRAMP6 cooperates with NRAMP1 in Mn utilization.","NRAMP METAL ION TRANSPORTER 6 (NRAMP6)","(ATNRAMP6);NRAMP METAL ION TRANSPORTER 6 (NRAMP6)"]
["AT5G48180","purple","Encodes a nitrile-specifier protein NSP5. NSP5 is one out of five (At3g16400/NSP1, At2g33070/NSP2, At3g16390/NSP3, At3g16410/NSP4 and At5g48180/NSP5) A. thaliana epithiospecifier protein (ESP) homologues that promote simple nitrile, but not epithionitrile or thiocyanate formation.","NITRILE SPECIFIER PROTEIN 5 (NSP5)","(ATNSP5);NITRILE SPECIFIER PROTEIN 5 (NSP5)"]
["AT3G52780","purple","Purple acid phosphatases superfamily protein;(source:Araport11)","(PAP20)","(ATPAP20); (PAP20)"]
["AT2G32960","purple","Encodes an atypical dual-speci&#64257;city phosphatase.","PLANT AND FUNGI ATYPICAL DUAL-SPECI&#64257;CITY PHOSPHATASE 2 (PFA-DSP2)","(AtPFA-DSP2);PLANT AND FUNGI ATYPICAL DUAL-SPECI&#64257;CITY PHOSPHATASE 2 (PFA-DSP2)"]
["AT3G27580","purple","D6PK family kinase involved in pulse-induced phototropism but also for time-dependent second positive phototropism, and continuous light-induced hypocotyl phototropism.D6PKL3 is polarly localized within the plasma membrane. It is involved in pollen aperture formation. The protein is localized within distinct regions of the pollen plasma membrane and mutants are also defective in pollen aperture formation.","(ATPK7)","(ATPK7);D6 PROTEIN KINASE LIKE 3 (D6PKL3)"]
["AT3G09540","purple","Pectate lyase","(ATPLL1)","(ATPLL1)"]
["AT5G42790","purple","encodes a protein with extensive homology to the largest subunit of the multicatalytic proteinase complex (proteasome). Negatively regulates thiol biosynthesis and arsenic tolerance.","PROTEASOME ALPHA SUBUNIT F1 (PAF1)","(ATPSM30);PROTEASOME ALPHA SUBUNIT F1 (PAF1);ARSENIC TOLERANCE 5 (ARS5)"]
["AT2G02040","purple","Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays. Enhances water uptake during early seed germination.","NRT1/ PTR FAMILY 8.3 (NPF8.3)","(ATPTR2-B);NITRATE TRANSPORTER 1 (NTR1); (PTR2-B);PEPTIDE TRANSPORTER 2 (PTR2);ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 2 (ATPTR2);NRT1/ PTR FAMILY 8.3 (NPF8.3); (ATNPF8.3)"]
["AT5G03530","purple","Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. CFP:RabC2a appears to co-localize with peroxisomes.","RAB GTPASE HOMOLOG C2A (RABC2A)","(ATRAB18B);ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG C2A (ATRABC2A);RAB GTPASE HOMOLOG C2A (RABC2A); (ATRAB ALPHA); (ATRAB)"]
["AT1G19230","purple","Riboflavin synthase-like superfamily protein;(source:Araport11)","(ATRBOHE)","(ATRBOHE); (RBOHE)"]
["AT3G15040","purple","senescence regulator (Protein of unknown function, DUF584);(source:Araport11)","(ATS40-7)","(ATS40-7)"]
["AT1G32940","purple","Together with SBT3.3 contributes to the activation of defence-related PMEs and Botrytis resistance.","(SBT3.5)","(ATSBT3.5); (SBT3.5)"]
["AT4G10120","purple","Encodes a sucrose-phosphate synthase.","SUCROSE PHOSPHATE SYNTHASE 4F (SPS4F)","(ATSPS4F);SUCROSE PHOSPHATE SYNTHASE 4F (SPS4F);SUCROSE PHOSPHATE SYNTHASE C (SPSC); (ATSPSC)"]
["AT2G47210","purple","myb-like transcription factor family protein;(source:Araport11)","SWR1 COMPLEX 4 (SWC4)","(ATSWC4);SWR1 COMPLEX 4 (SWC4)"]
["AT5G50790","purple","Encodes a member of the SWEET sucrose efflux transporter family proteins. Transcriptionally activated by long photoperiods; activation depends on FT and SOC1. The ectopic expression of SWEET10 causes early flowering and leads to higher levels of transcription of flowering-time related genes in the shoot apex.","(SWEET10)","(AtSWEET10); (SWEET10)"]
["AT4G24040","purple","Encodes a trehalase, member of Glycoside Hydrolase Family 37. Two isoforms, produced from a single transcript, regulate drought stress tolerance.","TREHALASE 1 (TRE1)","(ATTRE1);TREHALASE 1 (TRE1)"]
["AT3G12720","purple","Member of the R2R3 factor gene family.","MYB DOMAIN PROTEIN 67 (MYB67)","(ATY53);MYB DOMAIN PROTEIN 67 (ATMYB67); (MYB67);MYB DOMAIN PROTEIN 67 (MYB67)"]
["AT1G79900","purple","encodes a mitochondrial ornithine transporter that exports ornithine from the mitochondria to the cytosol","(BAC2)","(BAC2);ARABIDOPSIS MITOCHONDRIAL BASIC AMINO ACID CARRIER 2 (ATMBAC2)"]
["AT3G57090","purple","Encodes a protein with similarity to yeast FIS proteins. These membrane anchored proteins bind DRP proteins and function during organelle division. FIS1B is expressed ubiquitously and appears to be involved in peroxisome division.","(BIGYIN)","(BIGYIN);FISSION 1A (FIS1A)"]
["AT3G52850","purple","Encodes the Vacuolar Sorting Receptor-1 (VSR-1)/Epidermal Growth Factor Receptor-like protein1(VSR-1/ATELP1). Binds vacuolar targeting signals. Involved in sorting seed storage proteins into vacuoles. The mRNA is cell-to-cell mobile.","VACUOLAR SORTING RECEPTOR HOMOLOG 1 (VSR1)","(BP80B); (ATELP1); (BP80); (VSR-1);ARABIDOPSIS THALIANA EPIDERMAL GROWTH FACTOR RECEPTOR-LIKE PROTEIN (ATELP); (BP-80);VACUOLAR SORTING RECEPTOR HOMOLOG 1 (VSR1); (ATVSR1);MODIFIED TRANSPORT TO THE VACUOLE 18 (MTV18);BINDING PROTEIN OF 80 KDA 1;1 (BP80-1;1);VACUOLAR SORTING RECEPTOR 1;1 (VSR1;1); (GFS1);GREEN FLUORESCENT SEED 1 (GFS1)"]
["AT1G29800","purple","FYVE domain-containing protein; phosphatidylinositol 3-phosphate effector; regulates FYVE2-dependent autophagy.","(CFS2)","(CFS2); (FYVE3)"]
["AT1G70680","purple","Lipid droplet and endoplasmic reticulum-associated protein.","(CLO6)","(CLO6)"]
["AT5G57300","purple","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)","(COQ5)","(COQ5)"]
["AT3G57680","purple","C-terminal peptidase","(CTPB)","(CTPB)"]
["AT5G48640","purple","ABI5-interacting partner affecting ABA response and seed germination. negatively 52 modulates the ABA response by interacting with and inhibiting ABI5, while ABA 53 relieves the CycC1;1 interaction with and inhibition of ABI5 to activate ABI5 activity 54 for the ABA response, thereby inhibiting seed germination.","(CYCLINC1-1)","(CYCLINC1-1)"]
["AT3G44460","purple","basic leucine zipper transcription factor (BZIP67), identical to basic leucine zipper transcription factor GI:18656053 from (Arabidopsis thaliana); identical to cDNA basic leucine zipper transcription factor (atbzip67 gene) GI:18656052. Located in the nucleus and expressed during seed maturation in the cotyledons.","(DPBF2)","(DPBF2);BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR 67 (AtbZIP67)"]
["AT1G21400","purple","Branched chain alpha-keto acid dehydrogenase E1 alpha.","(E1A1)","(E1A1)"]
["AT3G27100","purple","ENY2 is a component of the deubiquitination module of the SAGA complex and is involved in the deubiquitination of histone 2B .","(ENY2)","(ENY2)"]
["AT1G64380","purple","encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.","(ERF61)","(ERF61)"]
["AT2G14095","purple","hypothetical protein;(source:Araport11)","(EXI1)","(EXI1)"]
["AT5G48670","purple","AGL80 is a member of the MADS box family of genes. AGL80 functions as a transcription factor within the central cell gene regulatory network and controls the expression of downstream genes required for central cell development and function.","AGAMOUS-LIKE 80 (AGL80)","(FEM111);AGAMOUS-LIKE 80 (AGL80)"]
["AT5G03610","purple","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates.","(GGL25)","(GGL25)"]
["AT2G23170","purple","encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro.","(GH3.3)","(GH3.3)"]
["AT5G67540","purple","Arabinanase/levansucrase/invertase;(source:Araport11)","(GH43A)","(GH43A)"]
["AT5G09740","purple","Encodes an enzyme with histone acetyltransferase activity. HAM2 primarily acetylate histone H4, but also display some ability to acetylate H3. Prior acetylation of lysine 5 on histone H4 reduces radioactive acetylation by either HAM2.","HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 (HAM2)","(HAG05);HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 11 (HAC11);HISTONE ACETYLTRANSFERASE OF THE GNAT/MYST SUPERFAMILY 5 (HAG5);HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 (HAM2)"]
["AT2G22800","purple","Encodes homeobox protein HAT9.","(HAT9)","(HAT9)"]
["AT1G06760","purple","winged-helix DNA-binding transcription factor family protein;(source:Araport11)","HISTONE 1.1 (H1.1)","(HON1);HISTONE 1.1 (H1.1)"]
["AT3G03890","purple","Dimeric &#946;-barrel protein that is structurally related to the putative non-canonical heme oxygenase (HO) and is located in chloroplasts. May function additionally in the tetrapyrrole biosynthetic pathway.","(HOZ)","(HOZ)"]
["AT5G06410","purple","HscB is a mitochondrial cochaperone involved in [Fe-S] cluster biosynthesis and iron homeostasis.","(HSCB)","(HSCB)"]
["AT4G40030","purple","Histone variant H3. Associated with gene body methylation.","HISTONE 3.3 (H3.3)","(HTR4);HISTONE 3.3 (H3.3)"]
["AT5G10980","purple","Histone variant 3.3","HISTONE 3.3 (H3.3)","(HTR8);HISTONE 3.3 (H3.3)"]
["AT4G15093","purple","catalytic LigB subunit of aromatic ring-opening dioxygenase family;(source:Araport11)","(LIGB)","(LIGB); (ATLIGB)"]
["AT2G44770","purple","Acts upstream of aperture proteins, their expression levels influence the number of aperture domains that form on the surface of developing pollen grains.","ENGULFMENT AND CELL MOTILITY (ELMO) DOMAIN B (ELMOD_B)","(MCR);ENGULFMENT AND CELL MOTILITY (ELMO) DOMAIN B (ELMOD_B)"]
["AT2G23790","purple","Mitochondrial calcium uniporter, acts redundantly with MCU1-2 in mitochondrial Ca2+ uptake.","(MCU3)","(MCU3)"]
["AT4G19045","purple","Member of a conserved family of proteins. Functions redundantly with MOB1A to regulate cell proliferation and JA metabolism.","(MOB1B)","(MOB1B)"]
["AT2G35170","purple","Histone H3 K4-specific methyltransferase SET7/9 family protein;(source:Araport11)","(MORN2)","(MORN2)"]
["AT5G06810","purple","transcription termination factor family protein;(source:Araport11)","(MTERF19)","(MTERF19)"]
["AT4G19650","purple","Mitochondrial transcription termination factor family protein;(source:Araport11)","(MTERF26)","(MTERF26)"]
["AT3G25545","purple","trigger factor;(source:Araport11)","(PBAC1)","(PBAC1)"]
["AT1G76360","purple","Protein kinase superfamily protein;(source:Araport11)","(PBL31)","(PBL31)"]
["AT4G04470","purple","22-kD peroxisomal membrane protein, an integral membrane protein embedded in the lipid bilayer.","(PMP22)","(PMP22)"]
["AT3G49840","purple","Encodes an orthlog of the Xenopus inner nuclear membrane (INM) protein Nemp1/TMEM194A.It is an inner nuclear membrane protein that binds with nucleoskeleton proteins.","(PNET2_C)","(PNET2_C)"]
["AT5G46400","purple","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","(PRP39-2)","(PRP39-2); (AT PRP39-2)"]
["AT1G62240","purple","hypothetical protein;(source:Araport11)","(PRR6)","(PRR6)"]
["AT5G13220","purple","Encodes JAZ10, a member of the JASMONATE ZIM-domain (JAZ) proteins acting as repressors of jasmonate (JA) signaling. An alternatively spliced form (JAZ10.4) of JAZ10 lacks the Jas domain.","(PW220)","(PW220)"]
["AT5G44750","purple","Homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).","(REV1)","(REV1);ARABIDOPSIS THALIANA HOMOLOG OF REVERSIONLESS 1 (ATREV1)"]
["AT4G09560","purple","Protease-associated (PA) RING/U-box zinc finger family protein;(source:Araport11)","(RMR4)","(RMR4)"]
["AT2G39725","purple","Mitochondrial protein involved in assembly of the mitochondrial respiratory chain complex II.","(SDHAF1)","(SDHAF1)"]
["AT3G23325","purple","Splicing factor 3B subunit 5/RDS3 complex subunit 10;(source:Araport11)","(SF3B5A)","(SF3B5A)"]
["AT5G27350","purple","Encodes a sugar-porter family protein that is induced during leaf senescence. The increase in its gene expression during leaf senescence is paralleled by an accumulation of monosaccharides. The mRNA is cell-to-cell mobile.","(SFP1)","(SFP1)"]
["AT2G28330","purple","hypothetical protein;(source:Araport11)","(SMR11)","(SMR11)"]
["AT2G47090","purple","Ubiquitin E3 ligase. Regulates the stability of WRKY33 to modulate the submergence response. Expression is repressed by hypoxia.","(SR1)","(SR1)"]
["AT4G24130","purple","ABA responsive SVB family gene.","(SVB5)","(SVB5)"]
["AT3G14770","purple","Nodulin MtN3 family protein;(source:Araport11)","(SWEET2)","(SWEET2); (AtSWEET2)"]
["AT4G10850","purple","Nodulin MtN3 family protein;(source:Araport11)","(SWEET7)","(SWEET7); (AtSWEET7)"]
["AT3G02950","purple","Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.","(THO7)","(THO7); (AtTHO7)"]
["AT1G32370","purple","Encodes a 122 amino acid basic protein involved in tobamovirus multiplication in planta. The mRNA is cell-to-cell mobile.","TOBAMOVIRUS MULTIPLICATION 2B (TOM2B)","(TTM1);TOBAMOVIRUS MULTIPLICATION 2B (TOM2B)"]
["AT1G60900","purple","Putative U2A65 splicing factor which functions in abscisic acid mediated flowering via regulating the precursor messenger RNA splicing of ABI5 and FLC in shoot apex. Regulates flowering time and displays a redundant role in pollen tube growth together with AtU2AF65a.","(U2AF65B)","(U2AF65B); (ATU2AF65B)"]
["AT3G56740","purple","ATI3A interacting protein containing a large N-terminal rhomboid-like transmembrane domain and a UBA domain at their C terminus, localized in the ER with an important role in plant heat tolerance. UBAC2 proteins may act as both cargo receptors and inducers of an ATI3-mediated selective autophagy pathway, where ATI3 and UBAC2 proteins are delivered to the vacuole under ER stress in an autophagy-dependent manner.","(UBAC2A)","(UBAC2A)"]
["AT5G22950","purple","SNF7 family protein;(source:Araport11)","(VPS24.1)","(VPS24.1)"]
["AT1G73030","purple","Encodes an ESCRT-related protein: CHMP1A/AT1G73030; CHMP1B/AT1G17730. CHMP1A and B mediate multivesicular body sorting of auxin carriers and are required for plant development. ESCRT: Endosomal Sorting Complexes Required For Transport machinery; CHMP: Charged Multivesicular Body Protein/Chromatin Modifying Protein.","(VPS46.2)","(VPS46.2);CHARGED MULTIVESICULAR BODY PROTEIN/CHROMATIN MODIFYING PROTEIN1A (CHMP1A)"]
["AT1G54115","purple","Involved in cation (Na and K) homeostasis.","CATION CALCIUM EXCHANGER 4 (CCX4)","(XS2);CATION CALCIUM EXCHANGER 4 (CCX4);CATION CALCIUM EXCHANGER 4 (ATCCX4)"]
["AT5G58060","purple","Constitutively expressed SNARE protein of the YKT6 family; cytoplasm/punctate vesicle localization.","(YKT61)","(YKT61); (ATGP1); (ATYKT61)"]
["AT3G20870","purple","ZIP metal ion transporter family;(source:Araport11)","ZINC TRANSPORTER 29 (ZTP29)","(ZTP29);ZINC TRANSPORTER 29 (ZTP29)"]
["AT4G26200","purple","Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA.","1-AMINO-CYCLOPROPANE-1-CARBOXYLATE SYNTHASE 7 (ACS7)","1-AMINO-CYCLOPROPANE-1-CARBOXYLATE SYNTHASE 7 (ACS7); (ATACS7);1-AMINO-CYCLOPROPANE-1-CARBOXYLATE SYNTHASE 7 (ACCS7)"]
["AT1G12010","purple","Encodes a protein that appears to have 1-amino-cyclopropane-1-carboxylic acid oxidase activity based on mutant analyses. The mRNA is cell-to-cell mobile.","1-AMINO-CYCLOPROPANE-1-CARBOXYLIC ACID OXIDASE 3 (ACO3)","1-AMINO-CYCLOPROPANE-1-CARBOXYLIC ACID OXIDASE 3 (ACO3)"]
["AT3G22110","purple","Encodes the alpha-3 subunit of 20s proteasome.","20S PROTEASOME ALPHA SUBUNIT C1 (PAC1)","20S PROTEASOME ALPHA SUBUNIT C1 (PAC1)"]
["AT1G01120","purple","Encodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis.","3-KETOACYL-COA SYNTHASE 1 (KCS1)","3-KETOACYL-COA SYNTHASE 1 (KCS1)"]
["AT1G04220","purple","Encodes KCS2, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","3-KETOACYL-COA SYNTHASE 2 (KCS2)","3-KETOACYL-COA SYNTHASE 2 (KCS2);DAISY (DAISY)"]
["AT2G16280","purple","Encodes KCS9, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","3-KETOACYL-COA SYNTHASE 9 (KCS9)","3-KETOACYL-COA SYNTHASE 9 (KCS9)"]
["AT4G33580","purple","Encodes a putative beta-carbonic anhydrase. Expressed at lower levels than other gene family members. Mutants display stunted growth in normal CO2 environments.","BETA CARBONIC ANHYDRASE 5 (BCA5)","A. THALIANA BETA CARBONIC ANHYDRASE 5 (ATBCA5);BETA CARBONIC ANHYDRASE 5 (BCA5)"]
["AT1G69750","purple","Encodes a protein with similarity with the yeast metal chaperone Cox19p. It is imported into mitochondria in vitro and found attached to the inner membrane facing the intermembrane space.","CYTOCHROME C OXIDASE 19-2 (COX19-2)","A. THALIANA CYTOCHROME C OXIDASE 19-2 (ATCOX19-2);CYTOCHROME C OXIDASE 19-2 (COX19-2)"]
["AT3G24650","purple","Homologous to the maize transcription factor Viviparous-1. Full length ABI3 protein binds to the highly conserved RY motif [DNA motif CATGCA(TG)], present in many seed-specific promoters, and the B3 domains of this transcription factor is necessary for the specific interaction with the RY element. Transcriptional activity of ABI3 requires the B3 DNA-binding domain and an activation domain. In addition to the known N-terminal-located activation domain, a second transcription activation domain was found in the B1 region of ABI3. ABI3 is essential for seed maturation. Regulator of the transition between embryo maturation and early seedling development. Putative seed-specific transcriptional activator. ABI3 is a central regulator in ABA signaling and is unstable in vivo. It interacts with and can by polyubiquitinated by AIP2 in vivo. Based on double mutant analyses, ABI3 interacts genetically with both FUS3 and LEC1 and is involved in controlling accumulation of chlorophyll and anthocyanins, sensitivity to abscisic acid, and expression of the members of the 12S storage protein gene family. In addition, both FUS3 and LEC1 regulate positively the abundance of the ABI3 protein in the seed. Alternative splicing of ABI3 is developmentally regulated by SUA (AT3G54230).","ABA INSENSITIVE 3 (ABI3)","ABA INSENSITIVE 3 (ABI3); (ATABI3);ABSCISIC ACID INSENSITIVE 3 (ABI3);SUGAR INSENSITIVE 10 (SIS10)"]
["AT4G01660","purple","Encodes an ABC1-like protein, member of the ATH subfamily; putative ABC transporter; isolated by functional complementation of a yeast abc1 mutant The mRNA is cell-to-cell mobile.","ABC TRANSPORTER 1 (ABC1)","ABC TRANSPORTER 1 (ABC1); (ATATH10);ABC TRANSPORTER 1 (ATABC1); (ABC1K13)"]
["AT5G24310","purple","One of four ABI-like proteins.","ABL INTERACTOR-LIKE PROTEIN 3 (ABIL3)","ABL INTERACTOR-LIKE PROTEIN 3 (ABIL3)"]
["AT2G27150","purple","Encodes the aldehyde oxidase delta isoform catalyzing the final step in abscisic acid biosynthesis.","ABSCISIC ALDEHYDE OXIDASE 3 (AAO3)","ABSCISIC ALDEHYDE OXIDASE 3 (AAO3);ARABIDOPSIS THALIANA ALDEHYDE OXIDASE 3 (At-AO3);ALDEHYDE OXIDASE DELTA (AOdelta); (AAO3); (AtAAO3)"]
["AT5G19530","purple","Encodes a spermine synthase. Required for internode elongation and vascular development, specifically in the mechanism that defines the boundaries between veins and nonvein regions. This mechanism may be mediated by polar auxin transport. Though ACL5 has been shown to function as a spermine synthase in E. coli, an ACL5 knockout has no effect on the endogenous levels of free and conjugated polyamines in Arabidopsis, suggesting that ACL5 may have a very specific or altogether different in vivo function.","ACAULIS 5 (ACL5)","ACAULIS 5 (ACL5)"]
["AT1G62380","purple","Encodes a protein similar to 1-aminocyclopropane-1-carboxylic oxidase (ACC oxidase). Expression of the AtACO2 transcripts is affected by ethylene.","ACC OXIDASE 2 (ACO2)","ACC OXIDASE 2 (ACO2); (ATACO2)"]
["AT3G44880","purple","Encodes a pheide a oxygenase (PAO). Accelerated cell death (acd1) mutants show rapid, spreading necrotic responses to both virulent and avirulent Pseudomonas syringae pv. maculicola or pv. tomato pathogens and to ethylene.","ACCELERATED CELL DEATH 1 (ACD1)","ACCELERATED CELL DEATH 1 (ACD1);LETHAL LEAF-SPOT 1 HOMOLOG (LLS1);PHEOPHORBIDE A OXYGENASE (PAO)"]
["AT4G39680","purple","SAP domain-containing protein;(source:Araport11)","ACINUS (ACINUS)","ACINUS (ACINUS)"]
["AT3G12380","purple","Encodes a gene similar to actin-related proteins in other organisms. Member of nuclear ARP gene family.","ACTIN-RELATED PROTEIN 5 (ARP5)","ACTIN-RELATED PROTEIN 5 (ARP5)"]
["AT5G16230","purple","Encodes one of two &#8710;9 palmitoyl-ACP desaturases responsible for the biosynthesis of &#969;-7 fatty acids in the maturing endosperm.","ACYL-ACYL CARRIER PROTEIN DESATURASE3 (AAD3)","ACYL-ACYL CARRIER PROTEIN DESATURASE3 (AAD3)"]
["AT5G17060","purple","A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor 1; ARF 1 (GP:385340) {Drosophila melanogaster), other ARFs and ARF-like proteins.","ADP-RIBOSYLATION FACTOR B1B (ARFB1B)","ADP-RIBOSYLATION FACTOR B1B (ARFB1B);ADP-RIBOSYLATION FACTOR B1B (ATARFB1B)"]
["AT4G32360","purple","Mitochondrial gene which together with ADX?P450 is involved in electron transport chain and is essential for maternal gametophytic control of embryogenesis. Required for homocastasterone biosynthesis in the female gametophyte.","ADRENODOXIN REDUCTASE (ADXR)","ADRENODOXIN REDUCTASE (ADXR)"]
["AT1G17310","purple","MADS-box transcription factor family protein;(source:Araport11)","AGAMOUS-LIKE 100 (AGL100)","AGAMOUS-LIKE 100 (AGL100)"]
["AT5G15800","purple","Encodes a MADS box transcription factor involved flower and ovule development. Functionally redundant with SEP2 and SEP3.","SEPALLATA1 (SEP1)","AGAMOUS-LIKE 2 (AGL2);SEPALLATA1 (SEP1)"]
["AT2G03060","purple","Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL30 is expressed in pollen.It forms heterodimers with other MICK family members.","AGAMOUS-LIKE 30 (AGL30)","AGAMOUS-LIKE 30 (AGL30)"]
["AT1G30260","purple","galactosyltransferase family protein;(source:Araport11)",null,"AGAMOUS-LIKE 79 (AGL79)"]
["AT1G44170","purple","Encodes an aldehyde dehydrogenase induced by ABA and dehydration that can oxidize saturated aliphatic aldehydes. It is also able to oxidize beta-unsaturated aldehydes, but not aromatic aldehydes. Activity of ALDH3H1 is NAD +-dependent.","ALDEHYDE DEHYDROGENASE 3H1 (ALDH3H1)","ALDEHYDE DEHYDROGENASE 4 (ALDH4);ALDEHYDE DEHYDROGENASE 3H1 (ALDH3H1)"]
["AT1G04580","purple","Encodes aldehyde oxidase AAO4 preferentially expressed in developing seeds.","ALDEHYDE OXIDASE 4 (AO4)","ALDEHYDE OXIDASE 2 (ATAO2);ARABDOPSIS THALIANA ALDEHYDE OXIDASE 4 (ATAO-4);ALDEHYDE OXIDASE 4 (AAO4);ALDEHYDE OXIDASE 4 (AO4)"]
["AT2G37760","purple","Encodes an NADPH-dependent aldo-keto reductase that can act on a wide variety of substrates in vitro including aliphatic and aromatic aldehydes and steroids. Transcript levels for this gene are up-regulated in response to cold, salt, and drought stress.","ALDO-KETO REDUCTASE FAMILY 4 MEMBER C8 (AKR4C8)","ALDO-KETO REDUCTASE FAMILY 4 MEMBER C8 (AKR4C8)"]
["AT2G37770","purple","Encodes an NADPH-dependent aldo-keto reductase that can act on a wide variety of substrates in vitro including saturated and unsaturated aldehydes, steroids, and sugars. GFP-tagged AKR4C9 localizes to the chloroplast where it may play a role in detoxifying reactive carbonyl compounds that threaten to impair the photosynthetic process. Transcript levels for this gene are up-regulated in response to cold, salt, and drought stress.","CHLOROPLASTIC ALDO-KETO REDUCTASE (ChlAKR)","ALDO-KETO REDUCTASE FAMILY 4 MEMBER C9 (AKR4C9);CHLOROPLASTIC ALDO-KETO REDUCTASE (ChlAKR)"]
["AT3G11200","purple","Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7).","ALFIN-LIKE 2 (AL2)","ALFIN-LIKE 2 (AL2)"]
["AT1G56560","purple","A/N-InvA is a neutral invertase that breaks sucrose down into fructose and glucose. It is member of the larger family of alkaline/neutral invertases (GH100). GFP-tagged A/N-InvA localizes to the mitochondria. atinva mutants have reduced root growth, reduced invertase activity, and increased expression of antioxidant genes under basal conditions. The levels of A/N-InvA transcripts rise in response to a hydrogen peroxide treatment.","ALKALINE/NEUTRAL INVERTASE A (A/N-InvA)","ALKALINE/NEUTRAL INVERTASE A (A/N-InvA)"]
["AT3G01420","purple","Encodes an alpha-dioxygenase involved in protection against oxidative stress and cell death. Induced in response to Salicylic acid and oxidative stress. Independent of NPR1 in induction by salicylic acid. The mRNA is cell-to-cell mobile.","(DOX1)","ALPHA-DIOXYGENASE 1 (ALPHA-DOX1); (DOX1); (DIOX1);PLANT ALPHA DIOXYGENASE 1 (PADOX-1);PLANT ALPHA DIOXYGENASE 1 (PADOX1)"]
["AT3G22370","purple","Encodes AOX1a, an isoform of alternative oxidase that is expressed in rosettes, flowers, and root. The alternative oxidase of plant mitochondria transfers electrons from the ubiquinone pool to oxygen without energy conservations. It is regulated through transcriptional control and by pyruvate. Plays a role in shoot acclimation to low temperature. Also is capable of ameliorating reactive oxygen species production when the cytochrome pathway is inhibited. AOX1a also functions as a marker for mitochondrial retrograde response. The mRNA is cell-to-cell mobile.","ALTERNATIVE OXIDASE 1A (AOX1A)","ALTERNATIVE OXIDASE 1A (AOX1A); (ATAOX1A);HYPER-SENSITIVITY-RELATED 3 (HSR3); (AtHSR3)"]
["AT1G77380","purple","Amino acid permease which transports basic amino acids.","AMINO ACID PERMEASE 3 (AAP3)","AMINO ACID PERMEASE 3 (AAP3); (ATAAP3)"]
["AT5G23810","purple","Encodes nonfunctional amino acid transporter. AAP7 is the most distantly related member of the AAP family, a group of well characterized amino acid transporters within the ATF1 superfamily. Expression of this gene has not been detected with RNA gel blots or promoter GUS studies.","AMINO ACID PERMEASE 7 (AAP7)","AMINO ACID PERMEASE 7 (AAP7)"]
["AT1G54280","purple","Encodes a member of the P4 subfamily of P-type ATPases expressed in the pollen plasma membrane. Double mutants with ALA7 display pollen and pollen tube defects.","AMINOPHOSPHOLIPID ATPASE 6 (ALA6)","AMINOPHOSPHOLIPID ATPASE 6 (ALA6)"]
["AT2G04660","purple","a highly conserved ubiquitin-protein ligase involved in cell cycle regulation","ANAPHASE-PROMOTING COMPLEX/CYCLOSOME 2 (APC2)","ANAPHASE-PROMOTING COMPLEX/CYCLOSOME 2 (APC2)"]
["AT4G36920","purple","Encodes a floral homeotic gene, a member of the AP2/EREBP (ethylene responsive element binding protein) class of transcription factors and is involved in the specification of floral organ identity, establishment of floral meristem identity, suppression of floral meristem indeterminancy, and development of the ovule and seed coat. AP2 also has a role in controlling seed mass. Dominant negative allele I28, revealed a function in meristem maintenance-mutant meristems are smaller than normal siblings. AP2 appears to act on the WUS-CLV pathway in an AG independent manner.","APETALA 2 (AP2)","APETALA 2 (AP2);FLORAL MUTANT 2 (FLO2);FLOWER 1 (FL1); (ATAP2)"]
["AT4G13040","purple","Encodes a member of the AP2/EREBP transcription factor family that has only one AP2 domain. It is a positive regulator of disease defense that functions upstream of SA accumulation.","APETALA 2 FAMILY PROTEIN INVOLVED IN SA MEDIATED DISEASE DEFENSE 1 (APD1)","APETALA 2 FAMILY PROTEIN INVOLVED IN SA MEDIATED DISEASE DEFENSE 1 (APD1)"]
["AT4G08930","purple","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group. The mRNA is cell-to-cell mobile.","APR-LIKE 6 (APRL6)","APR-LIKE 6 (ATAPRL6);APR-LIKE 6 (APRL6)"]
["AT2G02970","purple","Encodes a putative apyrase involved in pollen exine pattern formation and anther dehiscence.","APYRASE 6 (APY6)","APYRASE 6 (APY6); (ATAPY6)"]
["AT1G53850","purple","Encodes alpha5 subunit of 20s proteosome involved in protein degradation and RNA degradation.","20S PROTEASOME ALPHA SUBUNIT E1 (PAE1)","ARABIDOPSIS 20S PROTEASOME ALPHA SUBUNIT E1 (ATPAE1);20S PROTEASOME ALPHA SUBUNIT E1 (PAE1)"]
["AT1G65430","purple","IBR domain-containing protein;(source:Araport11)","ARIADNE 8 (ARI8)","ARABIDOPSIS ARIADNE 8 (ATARI8);ARIADNE 8 (ARI8)"]
["AT5G37600","purple","encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium","GLUTAMINE SYNTHASE CLONE R1 (GSR 1)","ARABIDOPSIS GLUTAMINE SYNTHASE 1;1 (ATGLN1;1);GLUTAMINE SYNTHASE CLONE R1 (GSR 1);GLUTAMINE SYNTHASE 1;1 (GLN1;1);ARABIDOPSIS THALIANA GLUTAMINE SYNTHASE CLONE R1 (ATGSR1)"]
["AT5G18270","purple","NAC domain containing protein 87;(source:Araport11)","ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 87 (ANAC087)","ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 87 (ANAC087)"]
["AT5G47200","purple","AtRabD2b encodes a Rab GTPase, which plays important roles in pollen development, germination and tube elongation. The mRNA is cell-to-cell mobile.","RAB GTPASE HOMOLOG 1A (RAB1A)","ARABIDOPSIS RAB GTPASE HOMOLOG D2B (ATRABD2B);RAB GTPASE HOMOLOG 1A (RAB1A);RAB GTPASE HOMOLOG 1A (ATRAB1A)"]
["AT4G40070","purple","RING/U-box superfamily protein;(source:Araport11)","ARABIDOPSIS T??XICOS EN LEVADURA 32 (ATL32)","ARABIDOPSIS T??XICOS EN LEVADURA 32 (ATL32)"]
["AT3G48030","purple","Mitochondria localized, hypoxia induced gene similar to rice HIGD.","HYPOXIA-INDUCED GENE DOMAIN 1 (ATHIGD1)","ARABIDOPSIS T??XICOS EN LEVADURA 48 (ATL48);HYPOXIA-INDUCED GENE DOMAIN 1 (ATHIGD1)"]
["AT1G72220","purple","RING/U-box superfamily protein;(source:Araport11)","ARABIDOPSIS T??XICOS EN LEVADURA 54 (ATL54)","ARABIDOPSIS T??XICOS EN LEVADURA 54 (ATL54)"]
["AT4G24000","purple","encodes a protein similar to cellulose synthase","CELLULOSE SYNTHASE LIKE G2 (CSLG2)","ARABIDOPSIS THALIANA CELLULOSE SYNTHASE LIKE G2 (ATCSLG2);CELLULOSE SYNTHASE LIKE G2 (CSLG2)"]
["AT3G21550","purple","transmembrane protein, putative (DUF679 domain membrane protein 2);(source:Araport11)","DUF679 DOMAIN MEMBRANE PROTEIN 2 (DMP2)","ARABIDOPSIS THALIANA DUF679 DOMAIN MEMBRANE PROTEIN 2 (AtDMP2);DUF679 DOMAIN MEMBRANE PROTEIN 2 (DMP2)"]
["AT5G63530","purple","Farnesylated protein that binds metals. Its expression is upregulated under heavy metal stress.","FARNESYLATED PROTEIN 3 (FP3)","ARABIDOPSIS THALIANA FARNESYLATED PROTEIN 3 (ATFP3);HEAVY METAL ASSOCIATED PROTEIN 54 (ATHMP54);FARNESYLATED PROTEIN 3 (FP3)"]
["AT3G17820","purple","encodes a cytosolic glutamine synthetase, the enzyme has low affinity with substrate ammonium The mRNA is cell-to-cell mobile.","GLUTAMINE SYNTHETASE 1.3 (GLN1.3)","ARABIDOPSIS THALIANA GLUTAMINE SYNTHASE CLONE KB6 (ATGSKB6);GLUTAMINE SYNTHETASE 1.3 (GLN1.3);GLUTAMINE SYNTHETASE 1;3 (GLN1;3)"]
["AT5G07530","purple","encodes a glycine-rich protein that has oleosin domain and is expressed specifically during flower stages 10 to 12. Protein is found on mature pollen coat.","GLYCINE RICH PROTEIN 17 (GRP17)","ARABIDOPSIS THALIANA GLYCINE RICH PROTEIN 17 (ATGRP17);ARABIDOPSIS THALIANA GLYCINE RICH PROTEIN 7 (ATGRP-7);GLYCINE RICH PROTEIN 17 (GRP17)"]
["AT1G73260","purple","Encodes a trypsin inhibitor involved in modulating programmed cell death in plant-pathogen interactions.","KUNITZ TRYPSIN INHIBITOR 1 (KTI1)","ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 4 (ATKTI4);ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 1 (ATKTI1);KUNITZ TRYPSIN INHIBITOR 1 (KTI1)"]
["AT1G17860","purple","Member of Kunitz trypsin inhibitor (KTI) family involved in plant defense response against spider mites.","ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 5 (ATKTI5)","ARABIDOPSIS THALIANA KUNITZ TRYPSIN INHIBITOR 5 (ATKTI5)"]
["AT2G23610","purple","Encodes a protein shown to have carboxylesterase activity, methyl IAA esterase activity, and methyl jasmonate esterase activity in vitro. This protein does not act on methyl salicylate, MeGA4, or MEGA9 in vitro.","METHYL ESTERASE 3 (MES3)","ARABIDOPSIS THALIANA METHYL ESTERASE 3 (ATMES3);METHYL ESTERASE 3 (MES3)"]
["AT5G59800","purple","Encodes a protein containing a methyl-CpG-binding domain that acts as an anti-silencing factor that prevent gene repression and DNA hypermethylation by tethering other anti-silencing factors to methylated DNA, which enables the function of DNA demethylases that in turn limit DNA methylation and prevent transcriptional gene silencing.","METHYL-CPG-BINDING DOMAIN 7 (MBD7)","ARABIDOPSIS THALIANA METHYL-CPG-BINDING DOMAIN 7 (ATMBD7);METHYL-CPG-BINDING DOMAIN 7 (MBD7)"]
["AT1G25380","purple","Encodes a mitochondrial-localized NAD+ transporter that transports NAD+ in a counter exchange mode with ADP and AMP in vitro.","NAD+ TRANSPORTER 2 (NDT2)","ARABIDOPSIS THALIANA NAD+ TRANSPORTER 2 (ATNDT2);NAD+ TRANSPORTER 2 (NDT2)"]
["AT5G55930","purple","oligopeptide transporter","OLIGOPEPTIDE TRANSPORTER 1 (OPT1)","ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 1 (ATOPT1);OLIGOPEPTIDE TRANSPORTER 1 (OPT1)"]
["AT4G26590","purple","oligopeptide transporter","OLIGOPEPTIDE TRANSPORTER 5 (OPT5)","ARABIDOPSIS THALIANA OLIGOPEPTIDE TRANSPORTER 5 (ATOPT5);OLIGOPEPTIDE TRANSPORTER 5 (OPT5)"]
["AT4G20260","purple","Encodes a Ca2+ and Cu2+ binding protein. N-terminal myristylation on glycine 2 appears to enable it to associate tightly with the plasma membrane. Recombinant PCaP1 interacts strongly with phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2) and PtdIns (3,4,5)P3, and weakly with PtdIns(3,5)P2 and PtdIns(4,5). It also interacts with calmodulin (CaM) in a calcium-dependent manner. CaM does not interfere with PCaP1 membrane localization but does weaken interactions between it and the PtdInsPs. PCaP1 has an apparent Kd of 10 uM for Cu2+ and can bind six ions per protein. Transcript levels for PCaP1 first fall and then rise following exposure to CuCl2. Mannitol, sorbitol, and the flg22 oligopeptide also increase expression levels. The mRNA is cell-to-cell mobile.","PLASMA-MEMBRANE ASSOCIATED CATION-BINDING PROTEIN 1 (PCAP1)","ARABIDOPSIS THALIANA PLASMA-MEMBRANE ASSOCIATED CATION-BINDING PROTEIN 1 (ATPCAP1);PLASMA-MEMBRANE ASSOCIATED CATION-BINDING PROTEIN 1 (PCAP1);MICROTUBULE-DESTABILIZING PROTEIN 25 (MDP25)"]
["AT3G11410","purple","Encodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.","PROTEIN PHOSPHATASE 2CA (PP2CA)","ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA (ATPP2CA);ABA-HYPERSENSITIVE GERMINATION 3 (AHG3);PROTEIN PHOSPHATASE 2CA (PP2CA)"]
["AT3G11730","purple","Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. It has also been identified as an isoprenylated protein.","(ATFP8)","ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG D1 (ATRABD1); (ATFP8);RAB GTPASE HOMOLOG D1 (RABD1)"]
["AT5G37180","purple","Encodes a protein with sucrose synthase activity (SUS5).","SUCROSE SYNTHASE 5 (SUS5)","ARABIDOPSIS THALIANA SUCROSE SYNTHASE 5 (ATSUS5);SUCROSE SYNTHASE 5 (SUS5)"]
["AT4G35840","purple","RING/U-box superfamily protein;(source:Araport11)","ARABIDOPSIS TOXICOS EN LEVADURA 26 (ATL26)","ARABIDOPSIS TOXICOS EN LEVADURA 26 (ATL26)"]
["AT1G31290","purple","ARGONAUTE 3;(source:Araport11)","ARGONAUTE 3 (AGO3)","ARGONAUTE 3 (AGO3)"]
["AT2G27880","purple","AGO5.Required for antiviral RNA silencing.Confers resistance to Potato virus X.","ARGONAUTE 5 (AGO5)","ARGONAUTE 5 (AGO5); (ATAGO5)"]
["AT5G21150","purple","AGO9-dependent sRNA silencing is crucial to specify cell fate in the Arabidopsis ovule. AGO9 is expressed in reproductive companion cells but not in the associated male or female gametes or their precursors. Therefore, AGO9 acts non-cell autonomously to silencing the activity of TEs activity in the female gametophyte.Loss of function mutants produce ectopic megaspore mother cell and supernumary female gametophytes.","ARGONAUTE 9 (AGO9)","ARGONAUTE 9 (AGO9)"]
["AT3G02890","purple","PHD protein which cooperates with PAIPP2 and BAH domain protein AIPP3 to read H3K4 histone marks. The BAH-PHD bivalent histone reader complex silences a substantial subset of H3K27me3-enriched loci, including development and stress response-related genes. Interacts with BDT1, acts with other PHD proteins to associate with flowering genes and thereby suppress their transcription.","ASI1-IMMUNOPRECIPITATED PROTEIN 2 (AIPP2)","ASI1-IMMUNOPRECIPITATED PROTEIN 2 (AIPP2); (PHD3)"]
["AT4G16144","purple","Encodes AMSH3, a deubiquitinating enzyme that hydrolyzes K48- and K63-linked ubiquitin chains in vitro. Required for intracellular trafficking and vacuole biogenesis.","ASSOCIATED MOLECULE WITH THE SH3 DOMAIN OF STAM 3 (AMSH3)","ASSOCIATED MOLECULE WITH THE SH3 DOMAIN OF STAM 3 (AMSH3)"]
["AT4G02940","purple","ALKBH10B is a functional RNA N6-methyladenosine demethylase. Reduction in ALKBH10B decreases m6A levels, and affects the stability of flowering time genes including FT, SPL3 and SPL9. Mutant plants are early flowering.","ATALKBH10B (ALKBH10B)","ATALKBH10B (ALKBH10B)"]
["AT2G37360","purple","Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16).","ATP-BINDING CASSETTE G2 (ABCG2)","ATP-BINDING CASSETTE G2 (ABCG2)"]
["AT3G53510","purple","Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16). Phloem-expressed and plasma membrane-localized jasmonate transporter which together with JAT3 and GLR3.3 involved in regulating long-distance translocation of JA, which is important for driving the loading, translocation of JA in the phloem pathway by a self-propagation mode, contributing to wound-induced systemic response/resistance.","ATP-BINDING CASSETTE G20 (ABCG20)","ATP-BINDING CASSETTE G20 (ABCG20);JASMONIC ACID TRANSPORTER 4 (JAT4)"]
["AT4G27420","purple","ATP-binding cassette plasma membrane transporter; its exocytosis is mediated in tapetal cells by beta-adaptins.","ATP-BINDING CASSETTE G9 (ABCG9)","ATP-BINDING CASSETTE G9 (ABCG9)"]
["AT4G04620","purple","Autophagy protein.","AUTOPHAGY 8B (ATG8B)","AUTOPHAGY 8B (ATG8B)"]
["AT3G60640","purple","Autophagy protein.","AUTOPHAGY 8G (ATG8G)","AUTOPHAGY 8G (ATG8G)"]
["AT3G61960","purple","autophagy gene regulated by TOPP4, which stimulated the formation of the ATG1a-ATG13a complex by dephosphorylating ATG13a.","AUTOPHAGY-RELATED PROTEIN 1A (ATG1A)","AUTOPHAGY-RELATED PROTEIN 1A (ATG1A)"]
["AT2G46530","purple","auxin response factor 11;(source:Araport11)","AUXIN RESPONSE FACTOR 11 (ARF11)","AUXIN RESPONSE FACTOR 11 (ARF11)"]
["AT3G59900","purple","Encodes ARGOS (Auxin-Regulated Gene Involved in Organ Size). Inducible by auxin. Involved in lateral organ size control. Transgenic plants expressing sense or antisense ARGOS cDNA display enlarged or reduced aerial organs, respectively. The alteration in organ size is attributable mainly to changes in cell number and the duration of organ growth.","AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE (ARGOS)","AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE (ARGOS)"]
["AT5G60830","purple","basic leucine-zipper 70;(source:Araport11)","BASIC LEUCINE-ZIPPER 70 (bZIP70)","BASIC LEUCINE-ZIPPER 70 (bZIP70);BASIC LEUCINE-ZIPPER 70 (AtbZIP70)"]
["AT3G62420","purple","Encodes a group-S bZIP transcription factor. Forms heterodimers with group-C bZIP transcription factors. The heterodimers bind to the ACTCAT cis-element of proline dehydrogenase gene.","BASIC REGION/LEUCINE ZIPPER MOTIF 53 (BZIP53)","BASIC REGION/LEUCINE ZIPPER MOTIF 53 (BZIP53);BASIC REGION/LEUCINE ZIPPER MOTIF 53 (ATBZIP53)"]
["AT1G32150","purple","Encodes a G group bZIP transcription factor family member that can bind cis elements with an ACGT core, such as G-box, Hex, C-box and As-1. The protein is localized in the nucleus and can homodimerize and can heterodimerize with other G group members.","BASIC REGION/LEUCINE ZIPPER TRANSCRIPTION FACTOR 68 (bZIP68)","BASIC REGION/LEUCINE ZIPPER TRANSCRIPTION FACTOR 68 (bZIP68); (AtbZIP68)"]
["AT5G07220","purple","A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.","BCL-2-ASSOCIATED ATHANOGENE 3 (BAG3)","BCL-2-ASSOCIATED ATHANOGENE 3 (ATBAG3);BCL-2-ASSOCIATED ATHANOGENE 3 (BAG3)"]
["AT1G77890","purple","One of a pair of paralogs (the other is AT4G08540)that is a subunit of the lass III phosphatidylinositol 3-kinase (PI3K) complex but is not essential for PI3P biosynthesis.","BECLIN 1-ASSOCIATED AUTOPHAGY-RELATED KEY REGULATOR 14A (ATG14A)","BECLIN 1-ASSOCIATED AUTOPHAGY-RELATED KEY REGULATOR 14A (ATG14A)"]
["AT1G19700","purple","Encodes a member of the BEL family of homeodomain proteins. Its interaction with PLP (PAS/LOV PROTEIN) is diminished by blue light.","BEL1-LIKE HOMEODOMAIN 10 (BEL10)","BEL1-LIKE HOMEODOMAIN 10 (BEL10);BEL1-LIKE HOMEODOMAIN 10 (BLH10)"]
["AT1G58180","purple","beta carbonic anhydrase 6;(source:Araport11)","BETA CARBONIC ANHYDRASE 6 (BCA6)","BETA CARBONIC ANHYDRASE 6 (BCA6);A. THALIANA BETA CARBONIC ANHYDRASE 6 (ATBCA6)"]
["AT4G27830","purple","Encodes a beta-glucosidase that may be responsible for acyl-glucose-dependent anthocyanin glucosyltransferase activity in Arabidopsis. In vitro efforts to demonstrate AAGT activity for BGLU10 have been unsuccessful but experiments with mutants in this gene suggest at least an indirect involvement in anthocyanin formation.","BETA GLUCOSIDASE 10 (BGLU10)","BETA GLUCOSIDASE 10 (BGLU10); (ATBGLU10)"]
["AT2G44450","purple","beta glucosidase 15;(source:Araport11)","BETA GLUCOSIDASE 15 (BGLU15)","BETA GLUCOSIDASE 15 (BGLU15)"]
["AT1G72990","purple","beta-galactosidase 17;(source:Araport11)","BETA-GALACTOSIDASE 17 (BGAL17)","BETA-GALACTOSIDASE 17 (BGAL17)"]
["AT4G36360","purple","putative beta-galactosidase (BGAL3 gene)","BETA-GALACTOSIDASE 3 (BGAL3)","BETA-GALACTOSIDASE 3 (BGAL3)"]
["AT5G56870","purple","Secreted protein that encodes a glycosyl hydrolase catalyzes the removal of terminal beta-D-galactosyl residues from beta-D-galactoside","BETA-GALACTOSIDASE 4 (BGAL4)","BETA-GALACTOSIDASE 4 (BGAL4)"]
["AT1G61810","purple","beta-glucosidase 45;(source:Araport11)","BETA-GLUCOSIDASE 45 (BGLU45)","BETA-GLUCOSIDASE 45 (BGLU45)"]
["AT5G09830","purple","Encodes a cytosolic BolA protein. Plays a repressive role in the tolerance against excess iron and methyl viologen-induced oxidative stress.","HOMOLOG OF E.COLI BOLA 2 (BOLA2)","BOLA3 (BOLA3);HOMOLOG OF E.COLI BOLA 2 (BOLA2)"]
["AT4G15400","purple","Encodes BIA1, a member of the BAHD acyltransferase family. Plays a role in controlling brassinosteroids levels, particularly in the root and hypocotyl in darkness.","BRASSINOSTEROID INACTIVATOR1 (BIA1)","BRASSINOSTEROID INACTIVATOR1 (BIA1);ABNORMAL SHOOT 1 (ABS1)"]
["AT3G63310","purple","Mediates cell elongation in brassinosteroid signaling.","BRZ-INSENSITIVE-LONG HYPOCOTYLS 4 (BIL4)","BRZ-INSENSITIVE-LONG HYPOCOTYLS 4 (BIL4);LIFEGUARD 2 (LFG2); (ATLFG2); (GAAP2)"]
["AT4G37610","purple","BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.","BTB AND TAZ DOMAIN PROTEIN 5 (bt5)","BTB AND TAZ DOMAIN PROTEIN 5 (bt5)"]
["AT3G43700","purple","Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1), AT3G06190 (BPM2), AT2G39760 (BPM3), AT3G03740 (BPM4), AT5G21010 (BPM5) and AT3G43700 (BPM6).","BTB-POZ AND MATH DOMAIN 6 (BPM6)","BTB-POZ AND MATH DOMAIN 6 (ATBPM6);BTB-POZ AND MATH DOMAIN 6 (BPM6)"]
["AT4G01840","purple","Encodes AtTPK5, a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK5 is targeted to the vacuolar membrane. May form homomeric ion channels in vivo.","CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 5 (KCO5)","CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 5 (KCO5); (ATTPK5); (ATKCO5); (TPK5)"]
["AT3G56170","purple","Encodes a calcium-dependent nuclease with similarity to staphylococcal nuclease.","CA-2+ DEPENDENT NUCLEASE (CAN)","CA-2+ DEPENDENT NUCLEASE (CAN);CALCIUM DEPENDENT NUCLEASE 1 (CAN1)"]
["AT5G15730","purple","Protein kinase superfamily protein;(source:Araport11)","CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 (CRLK2)","CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 2 (CRLK2); (AtCRLK2)"]
["AT1G76040","purple","member of Calcium Dependent Protein Kinase","CALCIUM-DEPENDENT PROTEIN KINASE 29 (CPK29)","CALCIUM-DEPENDENT PROTEIN KINASE 29 (CPK29)"]
["AT1G70670","purple","The gene encodes a stress-responsive and OB-associated non-seed caleosin-like protein. It plays a negative regulator role in ABA signaling.","CALEOSIN 4 (CLO4)","CALEOSIN 4 (CLO4);ARABIDOPSIS THALIANA CALEOSIN 4 (AtCLO4);PEROXYGENASE 4 (PXG4)"]
["AT1G66410","purple","encodes a calmodulin","CALMODULIN 4 (CAM4)","CALMODULIN 4 (CAM4)"]
["AT3G51920","purple","encodes a divergent member of calmodulin, which is an EF-hand family of Ca2+-binding proteins. This gene is expressed in leaves, flowers and siliques. The gene functionally complements yeast calmodulin 1 (CAM1) but only when selected against the plasmid harboring wild-type yeast sequences. Also the protein does not form formed a complex with a basic amphiphilic helical peptide in the presence of Ca2+ in vitro. Authors suggest that this gene may represent a Ca2+-binding sensor protein that interacts with a more limited set of target proteins than do more conventional CaM isoforms. Mutations in this gene alter plant responses to abiotic stress and abscisic acid.","CALMODULIN 9 (CAM9)","CALMODULIN 9 (CAM9);CALMODULIN LIKE PROTEIN 9 (CML9); (ATCML9)"]
["AT1G04440","purple","Member of CKL gene family (CKL-C group).","CASEIN KINASE LIKE 13 (CKL13)","CASEIN KINASE LIKE 13 (CKL13)"]
["AT4G25040","purple","Uncharacterized protein family (UPF0497);(source:Araport11)","CASP-LIKE PROTEIN 1F1 (CASPL1F1)","CASP-LIKE PROTEIN 1F1 (CASPL1F1)"]
["AT2G38480","purple","Uncharacterized protein family (UPF0497);(source:Araport11)","CASP-LIKE PROTEIN 4B1 (CASPL4B1)","CASP-LIKE PROTEIN 4B1 (CASPL4B1)"]
["AT5G02060","purple","Uncharacterized protein family (UPF0497);(source:Araport11)","CASP-LIKE PROTEIN 5B1 (CASPL5B1)","CASP-LIKE PROTEIN 5B1 (CASPL5B1)"]
["AT3G50810","purple","Uncharacterized protein family (UPF0497);(source:Araport11)","CASP-LIKE PROTEIN 5C2 (CASPL5C2)","CASP-LIKE PROTEIN 5C2 (CASPL5C2)"]
["AT3G13320","purple","low affinity calcium antiporter CAX2 The mRNA is cell-to-cell mobile.","CATION EXCHANGER 2 (CAX2)","CATION EXCHANGER 2 (CAX2); (atcax2)"]
["AT5G01820","purple","Encodes a CBL-interacting serine/threonine protein kinase.","SERINE/THREONINE PROTEIN KINASE 1 (SR1)","CBL-INTERACTING PROTEIN KINASE 14 (CIPK14);SNF1-RELATED PROTEIN KINASE 3.15 (SnRK3.15);SERINE/THREONINE PROTEIN KINASE 1 (ATSR1); (ATCIPK14);SERINE/THREONINE PROTEIN KINASE 1 (SR1);SOS2-LIKE PROTEIN KINASE 24 (PKS24)"]
["AT2G41140","purple","Encodes CDPK-related kinase 1 (CRK1).","CDPK-RELATED KINASE 1 (CRK1)","CDPK-RELATED KINASE 1 (CRK1); (ATCBK3); (ATCRK1)"]
["AT2G25540","purple","cellulose synthase","CELLULOSE SYNTHASE 10 (CESA10)","CELLULOSE SYNTHASE 10 (CESA10)"]
["AT5G10870","purple","Encodes chorismate mutase AtCM2.","CHORISMATE MUTASE 2 (CM2)","CHORISMATE MUTASE 2 (CM2);CHORISMATE MUTASE 2 (ATCM2)"]
["AT1G80820","purple","Encodes an cinnamoyl CoA reductase isoform. Involved in lignin biosynthesis.","CINNAMOYL COA REDUCTASE (CCR2)","CINNAMOYL COA REDUCTASE (CCR2); (ATCCR2)"]
["AT4G38060","purple","hypothetical protein;(source:Araport11)","CLAVATA COMPLEX INTERACTOR 2 (CCI2)","CLAVATA COMPLEX INTERACTOR 2 (CCI2)"]
["AT3G29810","purple","During the course of seed coat epidermal cell differentiation, COBRA-LIKE 2 plays a role in cellulose deposition into mucilage secretory cells of Arabidopsis seeds. COBRA-LIKE 2 affects mucilage solubility and cellulosic ray formation.","COBRA-LIKE PROTEIN 2 PRECURSOR (COBL2)","COBRA-LIKE PROTEIN 2 PRECURSOR (COBL2)"]
["AT1G09790","purple","COBRA-like protein 6 precursor;(source:Araport11)","COBRA-LIKE PROTEIN 6 PRECURSOR (COBL6)","COBRA-LIKE PROTEIN 6 PRECURSOR (COBL6)"]
["AT1G01290","purple","COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 3. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli MoaC. Expression is low in all tissues examined, except in roots. Appears to have targeting signals for chloroplast or mitochondria","COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 3 (CNX3)","COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 3 (CNX3)"]
["AT1G29160","purple","Encodes a DOF transcription factor involved in seed coat development. Regulates PRX2 and PRX25, involved in seed longevity.","COGWHEEL1 (COG1)","COGWHEEL1 (COG1)"]
["AT2G45260","purple","Negatively regulates autophagy by direct interaction with the key autophagy adaptor ATG8E, thus directly linking autophagy and drought tolerance. Contains a DUF641 domain which is is plant specific.","CHIQUITA1 (CHIQ1)","CONSTITUTIVELY STRESSED 1 (COST1);CHIQUITA1 (CHIQ1)"]
["AT5G42350","purple","Encodes CFK1 (COP9 INTERACTING F-BOX KELCH 1), a CSN (COP9 signalosome)-interacting F-box protein. CFK1 is a component of a functional ubiquitin ligase complex. CFK1 promotes hypocotyl elongation by increasing cell size.","COP9 SIGNALOSOME INTERACTING F-BOX KELCH 1 (CFK1)","COP9 SIGNALOSOME INTERACTING F-BOX KELCH 1 (CFK1)"]
["AT5G25540","purple","Expressed protein contains PAM2 PABC interacting domain.","CTC-INTERACTING DOMAIN 6 (CID6)","CTC-INTERACTING DOMAIN 6 (CID6)"]
["AT2G33540","purple","Member of Pol II CTD phosphatase family. Mediates the dephosphorylation of Pol II to modulate immune responses. Acts during flowering to dephosphorylate FLX4 which in turn promotes FLC expression.","C-TERMINAL DOMAIN PHOSPHATASE-LIKE 3 (CPL3)","C-TERMINAL DOMAIN PHOSPHATASE-LIKE 3 (CPL3); (ATCPL3)"]
["AT3G47500","purple","Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.","CYCLING DOF FACTOR 3 (CDF3)","CYCLING DOF FACTOR 3 (CDF3)"]
["AT1G69570","purple","CDF5 is a circadian regulated transcript that is antiphasic with respect to its natural antisense transcript (NAT) FLORE (AT1G69572).CDF5 transcript accumulation delays flowering. CDF5 links circadian oscillation and photoperiodism.","CYCLING DOF FACTOR 5 (CDF5)","CYCLING DOF FACTOR 5 (CDF5)"]
["AT5G64660","purple","CYS, MET, PRO, and GLY protein 2;(source:Araport11)","CYS, MET, PRO, AND GLY PROTEIN 2 (CMPG2)","CYS, MET, PRO, AND GLY PROTEIN 2 (CMPG2); (ATCMPG2)"]
["AT5G50260","purple","Encodes a papain-like cysteine protease involved in tapetal programmed cell death and pollen development.CEP1 is expressed specifically in the tapetum from stages 5 to 11 of anther development. The CEP1 protein first appears as a proenzyme in precursor protease vesicles, and is then transported to the vacuole and transformed into the mature enzyme before rupture of the vacuole. CEP1 was also released to the tapetal cell wall during late stage 6 and stage 7. After the tapetal cell wall degenerated, the CEP1 enzyme entered the callose wall from the degenerated tapetal cell wall and was probably involved in degeneration of the callose wall.","CYSTEINE ENDOPEPTIDASE 1 (CEP1)","CYSTEINE ENDOPEPTIDASE 1 (CEP1)"]
["AT5G47550","purple","Putative phytocystatin expressed in seedlings and induced by heat stress and abscisic acid. Overexpression increases germination rate and heat stress tolerance. CYS5 is a target of ABF1 and ABF3 transcriptional regulators which bind to its promoter.","CYSTEINE PROTEINASE INHIBITOR 5 (CYS5)","CYSTEINE PROTEINASE INHIBITOR 5 (CYS5)"]
["AT2G32190","purple","cysteine-rich/transmembrane domain A-like protein;(source:Araport11)","CYSTEINE-RICH TRANSMEMBRANE MODULE 4 (ATHCYSTM4)","CYSTEINE-RICH TRANSMEMBRANE MODULE 4 (ATHCYSTM4)"]
["AT3G22240","purple","cysteine-rich/transmembrane domain PCC1-like protein;(source:Araport11)","CYSTEINE-RICH TRANSMEMBRANE MODULE 9 (ATHCYSTM9)","CYSTEINE-RICH TRANSMEMBRANE MODULE 9 (ATHCYSTM9)"]
["AT2G19570","purple","Encodes a cytidine deaminase that deaminates cytidine and deoxycytidine and is competitively inhibited by cytosine-containing compounds.","CYTIDINE DEAMINASE 1 (CDA1)","CYTIDINE DEAMINASE 1 (CDA1); (AT-CDA1); (DESZ)"]
["AT3G61880","purple","Encodes a cytochrome p450 monooxygenase. Overexpression of this gene allows fruit growth independently of fertilization. The gene is normally expressed only in floral organs(during the Arabidopsis stage 14 flower) and in the funiculus at anthesis.","CYTOCHROME P450 78A9 (CYP78A9)","CYTOCHROME P450 78A9 (CYP78A9)"]
["AT4G36220","purple","encodes ferulate 5-hydroxylase (F5H). Involved in lignin biosynthesis.","FERULIC ACID 5-HYDROXYLASE 1 (FAH1)","CYTOCHROME P450 84A1 (CYP84A1); (F5H);FERULIC ACID 5-HYDROXYLASE 1 (FAH1)"]
["AT1G65670","purple","a member of the cytochrome P450 gene family. molecular function unknown.","CYTOCHROME P450, FAMILY 702, SUBFAMILY A, POLYPEPTIDE 1 (CYP702A1)","CYTOCHROME P450, FAMILY 702, SUBFAMILY A, POLYPEPTIDE 1 (CYP702A1)"]
["AT3G20087","purple","a cytochrome P450 pseudogene","CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 17 PSEUDOGENE (CYP705A17P)","CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 17 PSEUDOGENE (CYP705A17P)"]
["AT3G20140","purple","member of CYP705A","CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 23 (CYP705A23)","CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 23 (CYP705A23)"]
["AT2G46960","purple","member of CYP709B","CYTOCHROME P450, FAMILY 709, SUBFAMILY B, POLYPEPTIDE 1 (CYP709B1)","CYTOCHROME P450, FAMILY 709, SUBFAMILY B, POLYPEPTIDE 1 (CYP709B1)"]
["AT2G46950","purple","cytochrome P450, family 709, subfamily B, polypeptide 2;(source:Araport11)","CYTOCHROME P450, FAMILY 709, SUBFAMILY B, POLYPEPTIDE 2 (CYP709B2)","CYTOCHROME P450, FAMILY 709, SUBFAMILY B, POLYPEPTIDE 2 (CYP709B2)"]
["AT5G24950","purple","putative cytochrome P450","CYTOCHROME P450, FAMILY 71, SUBFAMILY A, POLYPEPTIDE 15 (CYP71A15)","CYTOCHROME P450, FAMILY 71, SUBFAMILY A, POLYPEPTIDE 15 (CYP71A15)"]
["AT3G26330","purple","putative cytochrome P450","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 37 (CYP71B37)","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 37 (CYP71B37)"]
["AT2G02580","purple","member of CYP71B","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 9 (CYP71B9)","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 9 (CYP71B9)"]
["AT4G37310","purple","member of CYP81H","CYTOCHROME P450, FAMILY 81, SUBFAMILY H, POLYPEPTIDE 1 (CYP81H1)","CYTOCHROME P450, FAMILY 81, SUBFAMILY H, POLYPEPTIDE 1 (CYP81H1)"]
["AT5G23190","purple","cytochrome P450 CYP86B1, nuclear gene for chloroplast product. CYP86B1 is a very long chain fatty acid hydroxylase specifically involved in polyester monomer biosynthesis during the course of plant development.","CYTOCHROME P450, FAMILY 86, SUBFAMILY B, POLYPEPTIDE 1 (CYP86B1)","CYTOCHROME P450, FAMILY 86, SUBFAMILY B, POLYPEPTIDE 1 (CYP86B1)"]
["AT3G03470","purple","P450 monooxygenase CYP89A9. Involved in NDCC accumulation during Arabidopsis leaf senescence.","CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 9 (CYP89A9)","CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 9 (CYP89A9)"]
["AT2G27690","purple","Encodes a CYP94C1. Has highest omega-hydroxylase activity with 9,10-epoxystearic acid, while also metabolized lauric acid (C12:0) and C18 unsaturated fatty acids. Gene expression is induced in response to wounding and jasmonic acid treatment.","CYTOCHROME P450, FAMILY 94, SUBFAMILY C, POLYPEPTIDE 1 (CYP94C1)","CYTOCHROME P450, FAMILY 94, SUBFAMILY C, POLYPEPTIDE 1 (CYP94C1)"]
["AT2G23180","purple","member of CYP96A","CYTOCHROME P450, FAMILY 96, SUBFAMILY A, POLYPEPTIDE 1 (CYP96A1)","CYTOCHROME P450, FAMILY 96, SUBFAMILY A, POLYPEPTIDE 1 (CYP96A1)"]
["AT1G75450","purple","This gene used to be called AtCKX6. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.","CYTOKININ OXIDASE 5 (CKX5)","CYTOKININ OXIDASE 5 (CKX5);ARABIDOPSIS THALIANA CYTOKININ OXIDASE 5 (ATCKX5);CYTOKININ OXIDASE 6 (ATCKX6)"]
["AT1G67070","purple","Encodes a protein with phosphomannose isomerase activity that is involved in synthesis of ascorbic acid. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.","DARK INDUCIBLE 9 (DIN9)","DARK INDUCIBLE 9 (DIN9);PHOSPHOMANNOSE ISOMERASE 2 (PMI2)"]
["AT3G55050","purple","Protein phosphatase 2C family protein;(source:Araport11)","D-CLADE TYPE 2C PROTEIN PHOSPHATASE 4 (PP2C.D4)","D-CLADE TYPE 2C PROTEIN PHOSPHATASE 4 (PP2C.D4)"]
["AT5G22760","purple","PHD finger family protein;(source:Araport11)","DDT-PHD PROTEIN2 (DDP2)","DDT-PHD PROTEIN2 (DDP2)"]
["AT2G38050","purple","Similar to mammalian steroid-5-alpha-reductase. Involved in the brassinolide biosynthetic pathway.","DE-ETIOLATED 2 (DET2)","DE-ETIOLATED 2 (DET2);DWARF 6 (DWF6); (ATDET2)"]
["AT5G26940","purple","Encodes a Mg2+-dependent DNA exonuclease that degrades organelle DNA during Arabidopsis pollen development.","DEFECTIVE IN POLLEN ORGANELLE DNA DEGRADATION1 (DPD1)","DEFECTIVE IN POLLEN ORGANELLE DNA DEGRADATION1 (DPD1)"]
["AT3G27925","purple","Encodes a DegP protease; nuclear gene encoding chloroplast-targeted protease that can degrade two lumenal proteins, plastocyanin and OE33, suggesting a role as a general-purpose protease in the thylakoid lumen. Involved in the degradation of D1 protein of PS II, hence participating in the repair of PS II damages caused by photoinhibition. The mRNA is cell-to-cell mobile.","DEGRADATION OF PERIPLASMIC PROTEINS 1 (DEG1)","DEGP PROTEASE 1 (DEGP1);DEGRADATION OF PERIPLASMIC PROTEINS 1 (DEG1)"]
["AT5G43280","purple","Encodes the peroxisomal delta 3,5-delta2,4-dienoyl-CoA isomerase, a enzyme involved in degradation of unsaturated fatty acids. Gene expression is induced upon seed germination.","DELTA(3,5),DELTA(2,4)-DIENOYL-COA ISOMERASE 1 (DCI1)","DELTA(3,5),DELTA(2,4)-DIENOYL-COA ISOMERASE 1 (DCI1);DELTA(3,5),DELTA(2,4)-DIENOYL-COA ISOMERASE 1 - OLD (DCI1);DELTA(3,5),DELTA(2,4)-DIENOYL-COA ISOMERASE 1 (ATDCI1)"]
["AT4G00550","purple","encodes a UDP-galactose-dependent digalactosyldiacylglycerol(DGDG) synthase. Located in chloroplast outer membrane.","DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 2 (DGD2)","DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 2 (DGD2)"]
["AT1G14130","purple","DAO1 is an IAA oxidase expressed in many different plant parts. it is a member of a family of dioxygenase and 2OG Fe(II) oxygenase domain and DAO domain containing proteins. It appears to be the major IAA oxidase in planta and major contributor to IAA degradation.","DIOXYGENASE FOR AUXIN OXIDATION 1 (DAO1)","DIOXYGENASE FOR AUXIN OXIDATION 1 (DAO1); (ATDAO)"]
["AT3G05345","purple","Chaperone DnaJ-domain superfamily protein;(source:Araport11)","DNA J PROTEIN C82 (DJC82)","DNA J PROTEIN C82 (DJC82)"]
["AT5G25480","purple","Encodes a DNA methyltransferase homolog. Human Dnmt2 methylates tRNA-Asp and can methylate Arabidopsis tRNA-Asp in vitro.","DNA METHYLTRANSFERASE-2 (DNMT2)","DNA METHYLTRANSFERASE 2 (AtDNMT2);DNA METHYLTRANSFERASE-2 (DNMT2); (TRDMT1)"]
["AT2G28510","purple","DOF transcription factor with a conserved zinc finger (ZF) DNA-binding domain.","DOF PROTEIN 2.1 (DOF2.1)","DOF PROTEIN 2.1 (DOF2.1)"]
["AT1G74340","purple","Encodes a subunit of the dolichol phosphate mannase synthase (DPMS) complex that may serve as membrane anchors for the catalytic core, DPMS1, or provide catalytic assistance. It is localized in the ER and mediates isoprenyl-linked glycan biogenesis.","DOLICHOL PHOSPHATE MANNOSE SYNTHASE 2 (DPMS2)","DOLICHOL PHOSPHATE MANNOSE SYNTHASE 2 (DPMS2)"]
["AT3G06760","purple","Drought-responsive family protein;(source:Araport11)","DROUGHT INDUCED 9-4 (ATDIL9-4)","DROUGHT INDUCED 9-4 (ATDIL9-4)"]
["AT5G45010","purple","Member of the intrinsically disordered protein family, interacts with different protein partners forming complexes involved in diverse biological mechanisms such as DNA repair, regulation of protein homeostasis, mRNA export. Role in the post-translational protein modification named DSSylation. Involved in molecular mechanisms underlying plant abiotic stress responses.","DSS1 HOMOLOG ON CHROMOSOME V (DSS1(V))","DSS1 HOMOLOG ON CHROMOSOME V (DSS1(V));DSS1 HOMOLOG ON CHROMOSOME V (ATDSS1(V))"]
["AT1G03930","purple","Phosphorylates serine, threonine, and tyrosine","DUAL SPECIFICITY KINASE 1 (ADK1)","DUAL SPECIFICITY KINASE 1 (ADK1);CASEIN KINASE I-LIKE 9 ALPHA (CKL9ALPHA);CASEIN KINASE I-LIKE 9 BETA (CKL9BETA)"]
["AT3G21520","purple","Encodes a protein is directly or indirectly involved in membrane fission during breakdown of the ER and the tonoplast during leaf senescence and in membrane fusion during vacuole biogenesis in roots. The mRNA is cell-to-cell mobile.","DUF679 DOMAIN MEMBRANE PROTEIN 1 (DMP1)","DUF679 DOMAIN MEMBRANE PROTEIN 1 (DMP1);ARABIDOPSIS THALIANA DUF679 DOMAIN MEMBRANE PROTEIN 1 (AtDMP1)"]
["AT4G18425","purple","transmembrane protein, putative (DUF679);(source:Araport11)","DUF679 DOMAIN MEMBRANE PROTEIN 4 (DMP4)","DUF679 DOMAIN MEMBRANE PROTEIN 4 (DMP4)"]
["AT5G46090","purple","transmembrane protein, putative (DUF679);(source:Araport11)","DUF679 DOMAIN MEMBRANE PROTEIN 6 (DMP6)","DUF679 DOMAIN MEMBRANE PROTEIN 6 (DMP6)"]
["AT1G75000","purple","ELO family protein; fatty acid elongase which takes part in the elongation of LCFAs to VLCFAs; putative mediator of NOS.","ELO HOMOLOG 3 (ELO3)","ELO HOMOLOG 3 (ELO3)"]
["AT4G19350","purple","Component of MIS12 complex involved in recruitment of proteins to kinetochore.Embryo lethal.","EMBRYO DEFECTIVE 3006 (EMB3006)","EMBRYO DEFECTIVE 3006 (EMB3006);NECESSARY FOR NUCLEAR FUNCTION 1 (NNF1)"]
["AT3G03810","purple","O-fucosyltransferase family protein;(source:Araport11)","EMBRYO SAC DEVELOPMENT ARREST 30 (EDA30)","EMBRYO SAC DEVELOPMENT ARREST 30 (EDA30)"]
["AT3G03650","purple","Exostosin family protein;(source:Araport11)","EMBRYO SAC DEVELOPMENT ARREST 5 (EDA5)","EMBRYO SAC DEVELOPMENT ARREST 5 (EDA5)"]
["AT1G11190","purple","Encodes a bifunctional nuclease that acts on both RNA and DNA involved in nucleic acid degradation to facilitate nucleotide and phosphate recovery during senescence. It has mismatch-specific endonuclease activity with wide recognition of single base mismatches as well as the ability to cleave indel types of mismatches (heteroduplexes with loops).","BIFUNCTIONAL NUCLEASE I (BFN1)","ENDONUCLEASE 1 (ENDO1);BIFUNCTIONAL NUCLEASE I (BFN1)"]
["AT1G08920","purple","Encodes ESL1, a transporter for monosaccharides.","ERD (EARLY RESPONSE TO DEHYDRATION) SIX-LIKE 1 (ESL1)","ERD (EARLY RESPONSE TO DEHYDRATION) SIX-LIKE 1 (ESL1)"]
["AT1G04310","purple","encodes an ethylene receptor related to bacterial two-component histidine kinases.","ETHYLENE RESPONSE SENSOR 2 (ERS2)","ETHYLENE RESPONSE SENSOR 2 (ERS2)"]
["AT1G69410","purple","Encodes eIF5A-2, a putative eukaryotic translation initiation factor. There are three eIF5A coding genes in Arabidopsis: eIF5A-1/At1g13950, eIF5A-2/At1g26630 and eIF5A-3/At1g69410.","EUKARYOTIC ELONGATION FACTOR 5A-3 (ELF5A-3)","EUKARYOTIC ELONGATION FACTOR 5A-3 (ATELF5A-3);EUKARYOTIC ELONGATION FACTOR 5A-3 (ELF5A-3)"]
["AT3G29400","purple","A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E1 (EXO70E1)","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E1 (ATEXO70E1);EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E1 (EXO70E1)"]
["AT5G61010","purple","A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E2 (EXO70E2)","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E2 (EXO70E2);EXOCYST SUBUNIT EXO70 FAMILY PROTEIN E2 (ATEXO70E2)"]
["AT2G28650","purple","A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H8 (EXO70H8)","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H8 (ATEXO70H8);EXOCYST SUBUNIT EXO70 FAMILY PROTEIN H8 (EXO70H8)"]
["AT5G59390","purple","SGS3-like, XH/XS domain-containing protein involved in DNA methylation.","FACTOR OF DNA DEMETHYLATION 1 (FDDM1)","FACTOR OF DNA DEMETHYLATION 1 (FDDM1)"]
["AT5G63560","purple","HXXXD-type acyl-transferase family protein;(source:Araport11)","FATTY ALCOHOL:CAFFEOYL-COA CAFFEOYL TRANSFERASE (FACT)","FATTY ALCOHOL:CAFFEOYL-COA CAFFEOYL TRANSFERASE (FACT)"]
["AT4G05010","purple","F-box family protein; mutant is hypersensitive to salt stress.","F-BOX STRESS INDUCED 3 (FBS3)","F-BOX STRESS INDUCED 3 (FBS3); (ATFBS3)"]
["AT5G50160","purple","Encodes a ferric chelate reductase that is expressed in shoots and flowers.","FERRIC REDUCTION OXIDASE 8 (FRO8)","FERRIC REDUCTION OXIDASE 8 (FRO8);FERRIC REDUCTION OXIDASE 8 (ATFRO8)"]
["AT5G26030","purple","encodes ferrochelatase I located in plastids. Involved in heme biosynthesis in non-photosynthetic tissues and induced by oxidative stress in photosynthetic tissues to supply heme for defensive hemoproteins The mRNA is cell-to-cell mobile.","FERROCHELATASE 1 (FC1)","FERROCHELATASE 1 (FC1); (FC-I); (ATFC-I);FUS3-COMPLEMENTING GENE 1 (FC1)"]
["AT3G19980","purple","Encodes catalytic subunit of serine/threonine protein phosphatase 2A. It can associate with phytochromes A and B in vitro. Mutant plants display an accelerated flowering phenotype.Acts antagonistically to SnRK2 to regulate ABI5 phosphorylation. It inteacts with NRP which results in tethering to endosomes leading to its degradation.","FLOWER-SPECIFIC, PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3 (FYPP3)","FLOWER-SPECIFIC, PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3 (ATFYPP3);EMBRYO DEFECTIVE 2736 (EMB2736);SERINE/THREONINE PROTEIN PHOSPHATASE (STPP);FLOWER-SPECIFIC, PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3 (FYPP3)"]
["AT4G28370","purple","Encodes an E3 ubiquitin ligase that is involved in plant cell wall modification, seed mucilage extrusion, and controls the degree of pectin methylesterification in seed mucilage. fly1 mutant seeds release more compact mucilage capsules and detached outer tangential primary walls when hydrated in water. Fly1 is located in the endomembrane system, likely localized in late endosome/multivesicular bodies/prevacular compartment. It has been shown to ubiquitinate proteins in conjunction with UBA1 and UBC8.","FLYING SAUCER 1 (FLY1)","FLYING SAUCER 1 (FLY1)"]
["AT4G16670","purple","FORKED-LIKE family member, part of Group 3 (Group 1 consists of FKD1, FL1-FL3; Group 2 consists of FL4 and FL8 and Group 3 consists of FL5- FL7). May coordinate leaf size with vein density, where Group 1 members and Group 3 members have opposing functions.FL7 is a Positive regulator of plant immunity to Phytophthora capsici and a positive regulator of PTI response including MAPK activity and ROS burst induced by PAMPs (PMID:36269178).","FORKED-LIKE7 (FL7)","FORKED-LIKE7 (FL7)"]
["AT3G14270","purple","Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. FAB1A and FAB1B complement the enlarged vacuolar phenotype of the fission yeast ste12delta mutant.","FORMS APLOID AND BINUCLEATE CELLS 1B (FAB1B)","FORMS APLOID AND BINUCLEATE CELLS 1B (FAB1B)"]
["AT2G28110","purple","Homolog to AT5G22940, a member of glycosyltransferase family 47 that is involved in secondary cell wall biosynthesis. It exhibits high sequence similarity to tobacco (Nicotiana plumbaginifolia) pectin glucuronyltransferase. Protein has a domain that shares significant similarity with the pfam03016 domain. It is expressed specifically in developing vessels and fiber cells, and FRA8 is targeted to Golgi. Mutants have irregular xylem formation, reduced cellulose levels and plants are smaller than normal siblings.","FRAGILE FIBER 8 (FRA8)","FRAGILE FIBER 8 (FRA8);IRREGULAR XYLEM 7 (IRX7)"]
["AT2G29080","purple","encodes an FtsH protease that is localized to the mitochondrion","FTSH PROTEASE 3 (ftsh3)","FTSH PROTEASE 3 (ftsh3); (ATFTSH3)"]
["AT3G53570","purple","a member of a CDC2-related kinase subfamily, the LAMMER kinases. activates STE12-dependent functions in yeast.","FUS3-COMPLEMENTING GENE 1 (FC1)","FUS3-COMPLEMENTING GENE 1 (FC1); (AME2);FUS3-COMPLEMENTING GENE 1 (AFC1)"]
["AT3G06580","purple","Encodes a protein with galactose kinase activity. The gene was shown to complement the yeast Agal1 mutant defective in the galactokinase gene GAL1.","(GALK)","GALACTOSE KINASE 1 (GAL1); (GALK)"]
["AT3G62660","purple","Encodes a protein with putative galacturonosyltransferase activity.","GALACTURONOSYLTRANSFERASE-LIKE 7 (GATL7)","GALACTURONOSYLTRANSFERASE-LIKE 7 (GATL7)"]
["AT1G08880","purple","Encodes HTA5, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (&#947;-H2AX) occurs around the break site. \u0001H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse &#947;-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no &#947;-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of &#947;-H2AX to a maximum of >50 diffuse foci. The level of &#947;H2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10?20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin.","(H2AXA)","GAMMA HISTONE VARIANT H2AX (GAMMA-H2AX);HISTONE H2A 5 (HTA5); (H2AXA);GAMMA H2AX (G-H2AX)"]
["AT4G32940","purple","Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death.","GAMMA VACUOLAR PROCESSING ENZYME (GAMMA-VPE)","GAMMA VACUOLAR PROCESSING ENZYME (GAMMA-VPE); (ATLEG GAMMA);ASPARAGINYL ENDOPEPTIDASE 3 (AEP3);LEGUMAIN GAMMA (LEG GAMMA); (GAMMAVPE)"]
["AT2G46270","purple","encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3!?s DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2.","G-BOX BINDING FACTOR 3 (GBF3)","G-BOX BINDING FACTOR 3 (GBF3)"]
["AT1G73790","purple","Encodes a gamma-tubulin complex protein that plays a role in gamma-tubulin complex localization, spindle stability and chromosomal segregation.","GCP3-INTERACTING PROTEIN 2 (GIP2)","GCP3-INTERACTING PROTEIN 2 (GIP2); (ATGIP2);GCP3-INTERACTING PROTEIN 1B (GIP1B)"]
["AT3G45240","purple","Encodes a geminivirus Rep interacting kinase (GRIK; GRIK1/AT3G45240, GRIK2/AT5G60550). GRIKs are SnRK1 (SNF1-related kinases) activating kinases. Both GRIKs specifically bind to the SnRK1 catalytic subunit and phosphorylate the equivalent threonine residue in its activation loop in vitro. Involved in resistance to S. sclerotiorum, fungal sRNA target.","GEMINIVIRUS REP INTERACTING KINASE 1 (GRIK1)","GEMINIVIRUS REP INTERACTING KINASE 1 (GRIK1); (ATSNAK2)"]
["AT2G23800","purple","encodes an endoplasmic reticulum-targeted geranylgeranyl pyrophosphate synthase","GERANYLGERANYL PYROPHOSPHATE SYNTHASE 2 (GGPS2)","GERANYLGERANYL PYROPHOSPHATE SYNTHASE 2 (GGPS2);GERANYLGERANYL PYROPHOSPHATE SYNTHASE 5 (GGPS5);ISOPRENYL DIPHOSPHATE SYNTHASE4 (IDS4); (GGPPS4)"]
["AT5G59845","purple","Member of a family of proteins named as being GA inducible but GASA10 does not appear to be GA induced. It is likely to be secreted as the protein is found in the cell wall.","GIBBERELLIC ACID STIMULATED ARABIDOPSIS 10 (GASA10)","GIBBERELLIC ACID STIMULATED ARABIDOPSIS 10 (GASA10)"]
["AT4G26420","purple","A member of the Arabidopsis SABATH methyltransferase gene family. Encodes GAMT1, a methyltransferase that uses S-adenosine-L-methionine (SAM) as a methyl donor to methylate the carboxyl group of GAs, resulting in the methyl esters of GAs (MeGAs). Expressed most highly in the siliques during seed development. SABATH family methyltransferase.","GIBBERELLIN METHYLTRANSFERASE 1 (GAMT1)","GIBBERELLIN METHYLTRANSFERASE 1 (GAMT1); (ATGAMT1)"]
["AT2G41220","purple","Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression is most abundant in root. The mRNA is cell-to-cell mobile.","GLUTAMATE SYNTHASE 2 (GLU2)","GLUTAMATE SYNTHASE 2 (GLU2)"]
["AT3G63080","purple","Encodes glutathione peroxidase.","GLUTATHIONE PEROXIDASE 5 (GPX5)","GLUTATHIONE PEROXIDASE 5 (ATGPX5);MATERNAL EFFECT EMBRYO ARREST 42 (MEE42);GLUTATHIONE PEROXIDASE 5 (GPX5); (GPXL5)"]
["AT1G17170","purple","Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). It is involved in the detoxification of the environmental pollutant 2,4,6-trinitrotoluene. Arabidopsis plants over-expressing At1g17170 were more resistant to TNT, removed more TNT from sterile and soil-based media, and had reduced levels of glutathione when grown in the presence of TNT.","GLUTATHIONE S-TRANSFERASE TAU 24 (GSTU24)","GLUTATHIONE S-TRANSFERASE TAU 24 (GSTU24);GLUTATHIONE S-TRANSFERASE TAU 24 (ATGSTU24);ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE (CLASS TAU) 24 (GST)"]
["AT1G02390","purple","putative sn-glycerol-3-phosphate 2-O-acyltransferase","GLYCEROL-3-PHOSPHATE SN-2-ACYLTRANSFERASE 2 (GPAT2)","GLYCEROL-3-PHOSPHATE SN-2-ACYLTRANSFERASE 2 (ATGPAT2);GLYCEROL-3-PHOSPHATE SN-2-ACYLTRANSFERASE 2 (GPAT2)"]
["AT3G11430","purple","sn-glycerol-3-phosphate 2-O-acyltransferas, involved in the biosynthesis of suberin polyester.","GLYCEROL-3-PHOSPHATE SN-2-ACYLTRANSFERASE 5 (GPAT5)","GLYCEROL-3-PHOSPHATE SN-2-ACYLTRANSFERASE 5 (ATGPAT5);GLYCEROL-3-PHOSPHATE SN-2-ACYLTRANSFERASE 5 (GPAT5)"]
["AT2G38110","purple","bifunctional sn-glycerol-3-phosphate 2-O-acyltransferase/phosphatase. Involved in cutin assembly.","GLYCEROL-3-PHOSPHATE SN-2-ACYLTRANSFERASE 6 (GPAT6)","GLYCEROL-3-PHOSPHATE SN-2-ACYLTRANSFERASE 6 (ATGPAT6);GLYCEROL-3-PHOSPHATE SN-2-ACYLTRANSFERASE 6 (GPAT6)"]
["AT5G43300","purple","Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family.","GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 3 (GDPD3)","GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 3 (GDPD3); (AtGDPD3)"]
["AT5G07510","purple","encodes a glycine-rich protein that is expressed in low abundance in stems and leaves, and very low abundance in flowers.","GLYCINE-RICH PROTEIN 14 (GRP14)","GLYCINE-RICH PROTEIN 14 (GRP14);ARABIDOPSIS THALIANA GLYCINE-RICH PROTEIN 4 (ATGRP-4);GLYCINE-RICH PROTEIN 4 (GRP-4);ARABIDOPSIS THALIANA GLYCINE-RICH PROTEIN 14 (ATGRP14)"]
["AT3G58550","purple","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)","GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 22 (LTPG22)","GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 22 (LTPG22)"]
["AT1G15380","purple","Glyoxalase which affects ABA?JA crosstalk. Member of the GLYI family. glyI4 mutant plants show a general stress phenotype characterized by compromised MG scavenging, accumulation of reactive oxygen species (ROS), stomatal closure, andreduced fitness was observed.","GLYOXYLASE I 4 (GLYI4)","GLYOXYLASE I 4 (GLYI4)"]
["AT3G17420","purple","Serine/threonine protein kinase-like protein expressed in etiolated cotyledons and found in glyoxysomes.","GLYOXYSOMAL PROTEIN KINASE 1 (GPK1)","GLYOXYSOMAL PROTEIN KINASE 1 (GPK1)"]
["AT1G18190","purple","This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC2 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (508?668 aa) portion of the protein.","GOLGIN CANDIDATE 2 (GC2)","GOLGIN CANDIDATE 2 (GC2)"]
["AT4G36990","purple","Encodes a protein whose sequence is similar to heat shock factors that regulate the expression of heat shock proteins. Transcript level is increased in response to heat shock. However, overexpression of this gene did not result in the increase of decrease of heat shock proteins.","HEAT SHOCK FACTOR 4 (HSF4)","HEAT SHOCK FACTOR 4 (HSF4);CLASS B HEAT SHOCK FACTOR B1 (HSFB1);ARABIDOPSIS THALIANA CLASS B HEAT SHOCK FACTOR B1 (AT-HSFB1);ARABIDOPSIS THALIANA HEAT SHOCK FACTOR 4 (ATHSF4);TL1-BINDING TRANSCRIPTION FACTOR 1 (TBF1)"]
["AT1G08970","purple","Encodes a NUCLEAR FACTOR-Y C (NF-YC) homologue NF-YC9. NF-YC3., NF-YC4 and NF-YC9 redundantly modulate GA- and ABA-mediated seed germination.","NUCLEAR FACTOR Y, SUBUNIT C9 (NF-YC9)","HEME ACTIVATED PROTEIN 5C (HAP5C);NUCLEAR FACTOR Y, SUBUNIT C9 (NF-YC9)"]
["AT1G20696","purple","Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. The mRNA is cell-to-cell mobile.","HIGH MOBILITY GROUP B3 (HMGB3)","HIGH MOBILITY GROUP B3 (HMGB3); (NFD03); (NFD3)"]
["AT1G31160","purple","Encodes a member of the histidine triad nucleotide-binding family of proteins, but its activity has not been determined.","HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 (HINT 2)","HISTIDINE TRIAD NUCLEOTIDE-BINDING 2 (HINT 2)"]
["AT3G21510","purple","Encodes AHP1, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).","HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 1 (AHP1)","HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 1 (AHP1)"]
["AT4G40040","purple","Histone 3.3 that is associated with gene bodies and open chromatin structure.","HISTONE 3.3 (H3.3)","HISTONE 3.3 (H3.3); (HTR5)"]
["AT2G01430","purple","ATHB17 is a member of the HD-Zip transcription factor family. It is expressed most strongly in roots at different stages of development and induced by ABA, paraquat, drought, and NaCl treatments. Loss of function mutants are more sensitive to salt and drought stress.The protein is nuclear localized and has been shown to bind to the promoter of SIG5 and other genes.","HOMEOBOX-LEUCINE ZIPPER PROTEIN 17 (HB17)","HOMEOBOX-LEUCINE ZIPPER PROTEIN 17 (ATHB17);ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 17 (ATHB-17);HOMEOBOX-LEUCINE ZIPPER PROTEIN 17 (HB17)"]
["AT3G23100","purple","A. thaliana homologue of the human DNA ligase IV-binding protein XRCC4. Yeast two-hybrid analysis demonstrated a strong interaction between A. thaliana DNA ligase IV and the A. thaliana homologue of the human DNA ligase IV-binding protein XRCC4. This interaction is shown to be mediated via the tandem BRCA C-terminal domains of A. thaliana DNA ligase IV protein.","HOMOLOG OF X-RAY REPAIR CROSS COMPLEMENTING 4 (XRCC4)","HOMOLOG OF X-RAY REPAIR CROSS COMPLEMENTING 4 (XRCC4)"]
["AT2G40810","purple","yeast autophagy-like protein;(source:Araport11)","HOMOLOG OF YEAST AUTOPHAGY 18C (ATG18C)","HOMOLOG OF YEAST AUTOPHAGY 18C (ATG18C);HOMOLOG OF YEAST AUTOPHAGY 18C (ATATG18C)"]
["AT5G13500","purple","Hyp O-arabinosyltransferase-like protein;(source:Araport11)","HYDROXYPROLINE O-ARABINOSYLATRANSFERASE 3 (HPAT3)","HYDROXYPROLINE O-ARABINOSYLATRANSFERASE 3 (HPAT3)"]
["AT5G62740","purple","SPFH/Band 7/PHB domain-containing membrane-associated protein family;(source:Araport11)","HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 (HIR1)","HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 (HIR1); (AtHIR4);HYPERSENSITIVE INDUCED REACTION 4 (HIR4); (ATHIR1)"]
["AT4G24110","purple","NADP-specific glutamate dehydrogenase;(source:Araport11)","HYPOXIA RESPONSE UNKNOWN PROTEIN 40 (HUP40)","HYPOXIA RESPONSE UNKNOWN PROTEIN 40 (HUP40)"]
["AT1G51760","purple","encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers. The mRNA is cell-to-cell mobile.","IAA-ALANINE RESISTANT 3 (IAR3)","IAA-ALANINE RESISTANT 3 (IAR3);JASMONIC ACID RESPONSIVE 3 (JR3)"]
["AT1G44350","purple","encodes a protein similar to IAA amino acid conjugate hydrolase. NO-induced, involved in growth and disease resistance. Plays a positive role in the activation of SAR when challenged with the avirulent pathogen Pst DC3000 (avrB) at 5 ? 106 CFU.","IAA-LEUCINE RESISTANT (ILR)-LIKE GENE 6 (ILL6)","IAA-LEUCINE RESISTANT (ILR)-LIKE GENE 6 (ILL6)"]
["AT5G54140","purple","encodes a protein similar to IAA amino acid conjugate hydrolase; member of ILR1-like (ILL) seven-gene family.","IAA-LEUCINE-RESISTANT (ILR1)-LIKE 3 (ILL3)","IAA-LEUCINE-RESISTANT (ILR1)-LIKE 3 (ILL3)"]
["AT2G43060","purple","Basic helix loop helix transcription factor that interacts with memebers of the BEE family of transcriptional regualtors.","ILI1 BINDING BHLH 1 (IBH1)","ILI1 BINDING BHLH 1 (IBH1); (ATIBH1)"]
["AT1G15050","purple","Belongs to auxin inducible gene family.","INDOLE-3-ACETIC ACID INDUCIBLE 34 (IAA34)","INDOLE-3-ACETIC ACID INDUCIBLE 34 (IAA34)"]
["AT1G04100","purple","Auxin induced gene, IAA10 (IAA10).","INDOLEACETIC ACID-INDUCED PROTEIN 10 (IAA10)","INDOLEACETIC ACID-INDUCED PROTEIN 10 (IAA10)"]
["AT3G16490","purple","Member of IQ67 (CaM binding) domain containing family.","IQ-DOMAIN 26 (IQD26)","IQ-DOMAIN 26 (IQD26)"]
["AT2G19710","purple","Regulator of Vps4 activity in the MVB pathway protein;(source:Araport11)","IST1-LIKE 5 (ISTL5)","IST1-LIKE 5 (ISTL5)"]
["AT5G05600","purple","Encodes a protein with similarity to flavonol synthases that is involved in the detoxifcation polycyclic aromatic hydrocarbons.One of 4 paralogs encoding a 2-oxoglutarate/Fe(II)-dependent oxygenases that hydroxylates JA to 12-OH-JA.","JASMONIC ACID OXIDASE 2 (JOX2)","JASMONATE-INDUCED OXYGENASE2 (JAO2);JASMONIC ACID OXIDASE 2 (JOX2)"]
["AT1G74950","purple","Key regulator in alternative splicing in the jasmonate signaling pathway, alone and in collaboration with other regulators.","(TIFY10B)","JASMONATE-ZIM-DOMAIN PROTEIN 2 (JAZ2); (TIFY10B)"]
["AT1G08620","purple","Member of family of Jumonji C (JmjC)-containing demethylases, its catalytic domain exhibits both H3K4 and H3K9 demethylation activities. Together with MMD1 promotes in male meiocytes gene expression in an H3K9me3-dependent manner and thereby contributes to meiotic chromosome condensation.","JUMONJI DOMAIN-CONTAINING PROTEIN 16 (JMJ16)","JUMONJI DOMAIN-CONTAINING PROTEIN 16 (JMJ16)"]
["AT4G17695","purple","Homeodomain-like superfamily protein;(source:Araport11)","KANADI 3 (KAN3)","KANADI 3 (KAN3)"]
["AT4G14950","purple","KMS1 encode a endoplasmic reticulum protein involved in the early secretory pathway.","KILLING ME SLOWLY 1 (KMS1)","KILLING ME SLOWLY 1 (KMS1)"]
["AT4G32250","purple","Encodes a component of the TOC machinery that phosphorylates import receptors, supports pre-protein import, and contributes to efficient chloroplast biogenesis.","KINASE OF THE OUTER CHLOROPLAST MEMBRANE 1 (KOC1)","KINASE OF THE OUTER CHLOROPLAST MEMBRANE 1 (KOC1)"]
["AT1G62990","purple","Encodes a homeodomain transcription factor of the Knotted family. May be involved in secondary cell wall biosynthesis. Mutants have moderately irregular xylem development. Expression of this gene is upregulated by SND1 and MYB46.","KNOTTED-LIKE HOMEOBOX OF ARABIDOPSIS THALIANA 7 (KNAT7)","KNOTTED-LIKE HOMEOBOX OF ARABIDOPSIS THALIANA 7 (KNAT7);IRREGULAR XYLEM 11 (IRX11)"]
["AT2G46750","purple","Encodes a homolog of rat L-gulono-1,4-lactone (L-GulL) oxidase that is involved in the biosynthesis of L-ascorbic acid.","L -GULONO-1,4-LACTONE ( L -GULL) OXIDASE 2 (GULLO2)","L -GULONO-1,4-LACTONE ( L -GULL) OXIDASE 2 (GULLO2); (ATGULLO2)"]
["AT4G35890","purple","Encodes a cytoplasmic LAM domain containing protein that is involved in leaf senescence. The mRNA is cell-to-cell mobile.","LA RELATED PROTEIN 1C (LARP1C)","LA RELATED PROTEIN 1C (LARP1C); (ATLARP1C)"]
["AT2G40370","purple","putative laccase, a member of laccase family of genes (17 members in Arabidopsis). Together with DP1/DIR12 involved in neolignan biosynthesis via sinapoylcholine/feruloylcholine.","LACCASE 5 (LAC5)","LACCASE 5 (LAC5)"]
["AT3G21420","purple","LATERAL BRANCHING OXIDOREDUCTASE (LBO), encodes an oxidoreductase-like enzyme of the 2-oxoglutarate and Fe(II)-dependent dioxygenase superfamily. It is involved in the biosynthesis of strigolactones.","LATERAL BRANCHING OXIDOREDUCTASE 1 (LBO1)","LATERAL BRANCHING OXIDOREDUCTASE 1 (LBO1)"]
["AT4G38360","purple","LAZ1 is a DUF300 domain protein that appears to function in vacuolar transport effecting brassinosteroid and programmed cell dealth signaling pathways.","LAZARUS 1 (LAZ1)","LAZARUS 1 (LAZ1)"]
["AT4G14730","purple","Stress induced membrane protein. Mutants show enhanced cell death under stress.","LIFEGUARD 1 (LFG1)","LIFEGUARD 1 (LFG1); (ATLFG1);GOLGI ANTIAPOPTOTIC PROTEIN 1 (GAAP1)"]
["AT1G03070","purple","Bax inhibitor-1 family protein;(source:Araport11)","LIFEGUARD 4 (LFG4)","LIFEGUARD 4 (LFG4); (ATLFG4)"]
["AT5G03080","purple","Encodes a phosphatidic acid phosphatase that can be detected in chloroplast membrane fractions. This gene, LPPgamma appears to be more important for diacylglycerol formation than LPPepsilon1 and LPPepsilon2 in the plastids. Heterozygous lppgamma mutants produce pollen that have defects in pollen tube germination and no homozygous mutants have been recovered. The mRNA is cell-to-cell mobile.","LIPID PHOSPHATE PHOSPHATASE GAMMA (LPPGAMMA)","LIPID PHOSPHATE PHOSPHATASE GAMMA (LPPGAMMA)"]
["AT1G55020","purple","lipoxygenase, a defense gene conferring resistance Xanthomonas campestris The mRNA is cell-to-cell mobile.","LIPOXYGENASE 1 (LOX1)","LIPOXYGENASE 1 (LOX1);ARABIDOPSIS LIPOXYGENASE 1 (ATLOX1)"]
["AT1G17420","purple","LOX3 encode a Lipoxygenase. Lipoxygenases (LOXs) catalyze the oxygenation of fatty acids (FAs).","LIPOXYGENASE 3 (LOX3)","LIPOXYGENASE 3 (LOX3);ARABIDOPSIS THALIANA LIPOXYGENASE 3 (ATLOX3)"]
["AT2G36307","purple","Has been identified as a translated small open reading frame by ribosome profiling.","LITTLE ZIPPER 4 (ZPR4)","LITTLE ZIPPER 4 (ZPR4);SHORT OPEN READING FRAME 21 (SORF21)"]
["AT2G28500","purple","Promotes radial growth and maintenance of cambial stem cells.","LOB DOMAIN-CONTAINING PROTEIN 11 (LBD11)","LOB DOMAIN-CONTAINING PROTEIN 11 (LBD11)"]
["AT5G56170","purple","LORELEI-LIKE-GPI-ANCHORED PROTEIN 1;(source:Araport11)","LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 (LLG1)","LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 (LLG1)"]
["AT3G43505","purple","Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.","LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 30 (LCR30)","LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 30 (LCR30)"]
["AT4G04960","purple","Concanavalin A-like lectin protein kinase family protein;(source:Araport11)","L-TYPE LECTIN RECEPTOR KINASE VII.1 (LECRK-VII.1)","L-TYPE LECTIN RECEPTOR KINASE VII.1 (LECRK-VII.1)"]
["AT5G03140","purple","Concanavalin A-like lectin protein kinase family protein;(source:Araport11)","L-TYPE LECTIN RECEPTOR KINASE VIII.2 (LECRK-VIII.2)","L-TYPE LECTIN RECEPTOR KINASE VIII.2 (LECRK-VIII.2)"]
["AT1G75020","purple","lysophosphatidyl acyltransferase 4;(source:Araport11)","LYSOPHOSPHATIDYL ACYLTRANSFERASE 4 (LPAT4)","LYSOPHOSPHATIDYL ACYLTRANSFERASE 4 (LPAT4)"]
["AT1G12640","purple","Encodes a lysophosphatidylcholine acyltransferase (LPCAT). Participates in the Lands cycle in developing seeds.","LYSOPHOSPHOLIPID ACYLTRANSFERASE 1 (LPLAT1)","LYSOPHOSPHOLIPID ACYLTRANSFERASE 1 (LPLAT1);LYSOPHOSPHATIDYLCHOLINE ACYLTRANSFERASE 1 (LPCAT1); (ATLPLAT1)"]
["AT4G14240","purple","Magnesium (Mg2+) efflux transporter which plays an important role in maintaining cytosolic Mg2+ concentrations through sequestering Mg2+ into vacuoles, which is required for stomatal opening, especially under high Mg2+ conditions.","MAGNESIUM RELEASE 1 (MGR1/CST2)","MAGNESIUM RELEASE 1 (MGR1/CST2)"]
["AT5G64560","purple","Transmembrane magnesium transporter that is located in plasma membrane of microspores to take up Mg from the locule. One of 9 family members.","MAGNESIUM TRANSPORTER 9 (MGT9)","MAGNESIUM TRANSPORTER 9 (MGT9); (ATMGT9); (MRS2-2)"]
["AT4G13990","purple","Encodes a mannan beta-galactosyltransferase that is required for normal beta-galactosylation of beta-galactoglucomannan (GGM).","MANNAN BETA-GALACTOSYLTRANSFERASE 1 (MBGT1)","MANNAN BETA-GALACTOSYLTRANSFERASE 1 (MBGT1); (ATGT14)"]
["AT5G43710","purple","Glycosyl hydrolase family 47 protein;(source:Araport11)","MANNOSIDASE 4 (MNS4)","MANNOSIDASE 4 (MNS4); (ATEDEM2)"]
["AT2G14680","purple","myosin heavy chain-like protein;(source:Araport11)","MATERNAL EFFECT EMBRYO ARREST 13 (MEE13)","MATERNAL EFFECT EMBRYO ARREST 13 (MEE13)"]
["AT2G34790","purple","Encodes a BBE-like enzyme that acts in monolignol metabolism by catalyzing the oxidation of aromatic allylic alcohols, such as coumaryl-, sinapyl-, and coniferyl alcohol, to the corresponding aldehydes.","MATERNAL EFFECT EMBRYO ARREST 23 (MEE23)","MATERNAL EFFECT EMBRYO ARREST 23 (MEE23);EMBRYO SAC DEVELOPMENT ARREST 28 (EDA28);BERBERINE BRIDGE ENZYME-LIKE 15 (ATBBE-LIKE 15)"]
["AT5G45800","purple","Leucine-rich repeat protein kinase family protein;(source:Araport11)","MATERNAL EFFECT EMBRYO ARREST 62 (MEE62)","MATERNAL EFFECT EMBRYO ARREST 62 (MEE62)"]
["AT4G22270","purple","Encodes a plasma membrane protein involved in the positive regulation of organ size development. Overexpression results in organ size enlargement.","MEMBRANE RELATED BIGGER1 (MRB1)","MEMBRANE RELATED BIGGER1 (MRB1);ARABIDOPSIS MEMBRANE RELATED BIGGER1 (ATMRB1)"]
["AT1G56260","purple","Required for the maintenance of stem cells through a reduction in DNA damage.","MERISTEM DISORGANIZATION 1 (MDO1)","MERISTEM DISORGANIZATION 1 (MDO1);TELOMERIC PATHWAYS IN ASSOCIATION WITH STN1 (TEN1)"]
["AT5G04200","purple","Encodes a putative metacaspase. Arabidopsis contains three type I MCP genes (MCP1a-c) and six type II MCP genes (MCP2a?f): AtMCP1a/At5g64240, AtMCP1b/At1g02170, AtMCP1c/At4g25110, AtMCP2a/At1g79310, AtMCP2b/At1g79330, AtMCP2c/At1g79320, AtMCP2d/At1g79340, AtMCP2e/At1g16420, AtMCP2f/At5g04200.","METACASPASE 9 (MC9)","METACASPASE 9 (AtMC9);METACASPASE 2F (AtMCP2f);METACASPASE 2F (MCP2f);METACASPASE 9 (MC9)"]
["AT1G07610","purple","one of the five metallothioneins (MTs) genes identified in Arabidopsis. MTs are cysteine-rich proteins required for heavy metal tolerance. The mRNA is cell-to-cell mobile.","METALLOTHIONEIN 1C (MT1C)","METALLOTHIONEIN 1C (MT1C)"]
["AT1G64660","purple","Encodes a functional methionine gamma-lyase, a cytosolic enzyme catalyzes the degradation of methionine into methanethiol, alpha-ketobutyrate and ammonia. The catabolism of excess methionine is important to methionine homeostasis. The mRNA is cell-to-cell mobile.","METHIONINE GAMMA-LYASE (MGL)","METHIONINE GAMMA-LYASE (ATMGL);METHIONINE GAMMA-LYASE (MGL)"]
["AT4G04840","purple","Methionine sulfoxide reductase; activated when exposed to salt stress.","METHIONINE SULFOXIDE REDUCTASE B6 (MSRB6)","METHIONINE SULFOXIDE REDUCTASE B6 (ATMSRB6);METHIONINE SULFOXIDE REDUCTASE B6 (MSRB6)"]
["AT2G23590","purple","Encodes a protein shown to have carboxylesterase activity in vitro. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.","METHYL ESTERASE 8 (MES8)","METHYL ESTERASE 8 (MES8);METHYL ESTERASE 8 (ATMES8)"]
["AT2G17780","purple","Encodes a mechanosensitive channel candidate MCA2. The three-dimensional structure of MCA2 was reconstructed and appears to comprise a small transmembrane region and large cytoplasmic region.","MID1-COMPLEMENTING ACTIVITY 2 (MCA2)","MID1-COMPLEMENTING ACTIVITY 2 (MCA2)"]
["AT5G08040","purple","mitochondrial import receptor subunit TOM5-like protein;(source:Araport11)","MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM5 HOMOLOG (TOM5)","MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM5 HOMOLOG (TOM5)"]
["AT4G19440","purple","Encodes a PRR protein involved in mitochondrial RNA processing.","MITOCHONDRIAL TRANSCRIPT STABILITY FACTOR 4 (MTSF4)","MITOCHONDRIAL TRANSCRIPT STABILITY FACTOR 4 (MTSF4)"]
["AT1G74120","purple","Encodes a mitochondrial transcription termination factor mTERF15. Required for mitochondrial nad2 intron 3 splicing and functional complex I activity.","MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR 15 (MTERF15)","MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR 15 (MTERF15)"]
["AT2G32510","purple","Member of MEKK subfamily involved in wound and JA induced signaling.Interacts with At5g40440, and activates At1g59580.","MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 17 (MAPKKK17)","MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 17 (MAPKKK17)"]
["AT1G53570","purple","Encodes a member of the MEKK subfamily that functions redundantly with MAPKKK5 to activate MPK3/6 downstream of multiple pattern recognition receptors and confer resistance to both bacterial and fungal pathogens.","MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 3 (MAP3KA)","MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 3 (MAP3KA);MAP KINASE KINASE KINASE 3 (MAPKKK3)"]
["AT2G01520","purple","Encodes a cis-cinnamic acid responsive gene that is a member of the major latex protein-like gene family and plays a role in promoting vegetative growth and delaying &#64258;owering. The mRNA is cell-to-cell mobile.","MLP-LIKE PROTEIN 328 (MLP328)","MLP-LIKE PROTEIN 328 (MLP328);(ZUSAMMEN-CA)-ENHANCED 1 (ZCE1)"]
["AT2G46320","purple","Involved in Mn and Fe homeostasis, root length, and flowering time.","MN SUPEROXIDE DISMUTASE 2 (MTM2)","MN SUPEROXIDE DISMUTASE 2 (MTM2)"]
["AT1G12530","purple","Identified in a screen for suppressors of snc1. Regulator of SNC1 and RPP4 mediated immunity. Interacts with methyltransferase ATXR7.","MODIFIER OF SNC1 9 (MOS9)","MODIFIER OF SNC1 9 (MOS9)"]
["AT2G25680","purple","Encodes a high-affinity molybdate transporter. Mutant has reduced concentrations of molybdate in roots and shoots, and reduced shoot and root length when growing on Mo-limited medium.","MOLYBDATE TRANSPORTER 1 (MOT1)","MOLYBDATE TRANSPORTER 1 (MOT1)"]
["AT1G18100","purple","Encodes a member of the FT and TFL1 family of phosphatidylethanolamine-binding proteins. It is expressed in seeds and up-regulated in response to ABA. Loss of function mutants show decreased rate of germination in the presence of ABA. ABA dependent regulation is mediated by both ABI3 and ABI5. ABI5 promotes MFT expression, primarily in the radicle-hypocotyl transition zone and ABI3 suppresses it in the seed.","(E12A11)","MOTHER OF FT AND TFL1 (MFT); (E12A11)"]
["AT2G32700","purple","Encodes a WD40 repeat and LUFS domain containing protein that is similar to LUG. Interacts physically with SEUSS and likely functions as part of a repressor complex that represses AG. Involved in cell wall modifications necessary for mucilage extrusion and mediates aluminium sensitivity through PECTIN METHYLESTERASE46-modulated root cell wall pectin methylesterification.","LEUNIG_HOMOLOG (LUH)","MUCILAGE-MODIFIED 1 (MUM1);LEUNIG_HOMOLOG (LUH)"]
["AT3G10320","purple","MUCI21 is a GT61 protein required for the production of highly branched xylan in seed coat mucilage. MUCI21 likely decorates xylan with xylose side chains that seem to be necessary for pectin attachment to the seed surface.","MUCILAGE-RELATED 21 (MUCI21)","MUCILAGE-MODIFIED 5 (MUM5);MUCILAGE-RELATED 21 (MUCI21); (MUM5)"]
["AT1G04120","purple","encodes a high-affinity inositol hexakisphosphate transporter that plays a role in guard cell signaling and phytate storage. It is a member of MRP subfamily / ABC transporter subfamily C.","ATP-BINDING CASSETTE C5 (ABCC5)","MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 5 (MRP5);ATP-BINDING CASSETTE C5 (ABCC5);MULTIDRUG RESISTANCE PROTEIN 5 (MRP5);ARABIDOPSIS THALIANA ATP-BINDING CASSETTE C5 (ATABCC5);MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 5 (ATMRP5)"]
["AT2G42680","purple","One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated. The mRNA is cell-to-cell mobile.","MULTIPROTEIN BRIDGING FACTOR 1A (MBF1A)","MULTIPROTEIN BRIDGING FACTOR 1A (MBF1A);ARABIDOPSIS THALIANA MULTIPROTEIN BRIDGING FACTOR 1A (ATMBF1A)"]
["AT3G02940","purple","Encodes a putative transcription factor (MYB107).","MYB DOMAIN PROTEIN 107 (MYB107)","MYB DOMAIN PROTEIN 107 (MYB107);MYB DOMAIN PROTEIN 107 (AtMYB107)"]
["AT1G17950","purple","R2R3-MYB transcription family. Absence of the MYB52 transcription factor is correlated with an increase in PME activity and a decrease in the degree of pectin methylesterification. Transcriptionally activates PECTIN METHYLESTERASE INHIBITOR6 (PMEI6), PMEI14, and SUBTILISIN-LIKE SER PROTEASE1.7 (SBT1.7) by binding to their promoters. MYB52 can bind to the same regulatory regions as the ERF4 transcriptional represssor.","MYB DOMAIN PROTEIN 52 (MYB52)","MYB DOMAIN PROTEIN 52 (ATMYB52); (BW52);MYB DOMAIN PROTEIN 52 (MYB52)"]
["AT1G08800","purple","myosin-binding protein (Protein of unknown function, DUF593);(source:Araport11)","MYOSIN BINDING PROTEIN 1 (MYOB1)","MYOSIN BINDING PROTEIN 1 (MYOB1)"]
["AT4G17830","purple","NAOD encodes a functional acetylornithine deacetylase. Silenced lines plants flower early but have reduced fertility (siliques do not develop) as well as reduced ornithine levels.NAOD mediates a linear pathway for ornithine biosynthesis.","N2-ACETYLORNITHINE DEACETYLASE (ATNAOD)","N2-ACETYLORNITHINE DEACETYLASE (ATNAOD)"]
["AT3G15510","purple","Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2.","NAC DOMAIN CONTAINING PROTEIN 2 (NAC2)","NAC DOMAIN CONTAINING PROTEIN 2 (ATNAC2);ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 56 (ANAC056);NAC-REGULATED SEED MORPHOLOGY 1 (NARS1);NAC DOMAIN CONTAINING PROTEIN 2 (NAC2)"]
["AT5G39610","purple","Encodes a NAC-domain transcription factor. Positively regulates aging-induced cell death and senescence in leaves. This gene is upregulated in response to salt stress in wildtype as well as NTHK1 transgenic lines although in the latter case the induction was drastically reduced. It was also upregulated by ABA, ACC and NAA treatment, although in the latter two cases, the induction occurred relatively late when compared with NaCl or ABA treatments. Note: this protein (AtNAC6) on occasion has also been referred to as AtNAC2, not to be confused with the AtNAC2 found at locus AT3G15510.","NAC DOMAIN CONTAINING PROTEIN 6 (NAC6)","NAC DOMAIN CONTAINING PROTEIN 2 (NAC2);NAC DOMAIN CONTAINING PROTEIN 6 (ATNAC6);ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 92 (ANAC092);ORESARA 1 (ORE1);NAC DOMAIN CONTAINING PROTEIN 2 (ATNAC2);NAC DOMAIN CONTAINING PROTEIN 6 (NAC6)"]
["AT1G28470","purple","NAC domain containing protein 10;(source:Araport11)","NAC DOMAIN CONTAINING PROTEIN 10 (NAC010)","NAC DOMAIN CONTAINING PROTEIN 10 (ANAC010);SECONDARY WALL-ASSOCIATED NAC DOMAIN PROTEIN 3 (SND3);NAC DOMAIN CONTAINING PROTEIN 10 (NAC010)"]
["AT5G61430","purple","(NAC) domain transcription factor; regulated at both transcriptional and post-transcriptional levels under Fe-deficient conditions. Part of module with NFYA8, regulated by MIR164b.","NAC DOMAIN CONTAINING PROTEIN 100 (NAC100)","NAC DOMAIN CONTAINING PROTEIN 100 (ANAC100); (NAC5);NAC DOMAIN CONTAINING PROTEIN 100 (NAC100); (ATNAC5)"]
["AT1G52890","purple","encodes a NAC transcription factor whose expression is induced by drought, high salt, and abscisic acid. This gene binds to ERD1 promoter in vitro.","NAC DOMAIN CONTAINING PROTEIN 19 (NAC019)","NAC DOMAIN CONTAINING PROTEIN 19 (ANAC019);NAC DOMAIN CONTAINING PROTEIN 19 (NAC019); (ANAC19)"]
["AT3G15500","purple","Encodes an ATAF-like NAC-domain transcription factor that doesn't contain C-terminal sequences shared by CUC1, CUC2 and NAM. Note: this protein (AtNAC3) is not to be confused with the protein encoded by locus AT3G29035, which, on occasion, has also been referred to as AtNAC3. The mRNA is cell-to-cell mobile.","NAC DOMAIN CONTAINING PROTEIN 3 (NAC3)","NAC DOMAIN CONTAINING PROTEIN 3 (ATNAC3);NAC DOMAIN CONTAINING PROTEIN 55 (ANAC055);NAC DOMAIN CONTAINING PROTEIN 55 (NAC055);NAC DOMAIN CONTAINING PROTEIN 3 (NAC3); (ANAC55)"]
["AT1G02220","purple","NAC domain transcription factor which functions as a negative regulator of the TDIF-PXY module and fine-tunes TDIF signaling in vascular development. Controls the balance of xylem formation and cambial cell divisions.","NAC DOMAIN CONTAINING PROTEIN 3 (NAC003)","NAC DOMAIN CONTAINING PROTEIN 3 (NAC003);NAC DOMAIN CONTAINING PROTEIN 3 (ANAC003); (XVP)"]
["AT2G24430","purple","NAC domain containing protein 38;(source:Araport11)","NAC DOMAIN CONTAINING PROTEIN 38 (NAC038)","NAC DOMAIN CONTAINING PROTEIN 38 (ANAC038);NAC DOMAIN CONTAINING PROTEIN 38 (NAC038)"]
["AT2G33480","purple","NAC domain containing protein 41;(source:Araport11)","NAC DOMAIN CONTAINING PROTEIN 41 (NAC041)","NAC DOMAIN CONTAINING PROTEIN 41 (ANAC041);NAC DOMAIN CONTAINING PROTEIN 41 (NAC041)"]
["AT4G29230","purple","NAC domain protein involved in negative regulation of flowering and secondary cell wall biosynthesis.","NAC DOMAIN CONTAINING PROTEIN 75 (NAC075)","NAC DOMAIN CONTAINING PROTEIN 75 (anac075);NAC DOMAIN CONTAINING PROTEIN 75 (NAC075); (SND4)"]
["AT5G07680","purple","NAC domain containing protein 80;(source:Araport11)","NAC DOMAIN CONTAINING PROTEIN 80 (NAC080)","NAC DOMAIN CONTAINING PROTEIN 80 (ANAC080);ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 79 (ANAC079); (NAC4);NAC DOMAIN CONTAINING PROTEIN 80 (NAC080); (ATNAC4)"]
["AT5G13180","purple","Encodes a NAC domain transcription factor that interacts with VND7 and negatively regulates xylem vessel formation; expression is both positively and negatively regulated in the transcriptional cascade involved in xylem vessel formation.","NAC DOMAIN CONTAINING PROTEIN 83 (NAC083)","NAC DOMAIN CONTAINING PROTEIN 83 (ANAC083);NAC DOMAIN CONTAINING PROTEIN 83 (NAC083);VND-INTERACTING 2 (VNI2)"]
["AT1G69490","purple","Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence. The mRNA is cell-to-cell mobile.","NAC-LIKE, ACTIVATED BY AP3/PI (NAP)","NAC-LIKE, ACTIVATED BY AP3/PI (NAP);ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 29 (ANAC029);NAC-LIKE, ACTIVATED BY AP3/PI (ATNAP)"]
["AT4G06410","purple","The natural antisense long non-coding RNA of FL7. nalncFL7 suppresses RNA accumulation of FL7. nalncFL7 is a negetive regulator of plant immunity to Phytophthora capsici (PMID:36269178).","NATURAL ANTISENSE LONG NON-CODING RNA OF FL7 (NALNCFL7)","NATURAL ANTISENSE LONG NON-CODING RNA OF FL7 (NALNCFL7)"]
["AT3G11660","purple","encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus. Localization of the gene product is similar to that of NHL3 (plasma membrane) but it is yet inconclusive.","NDR1/HIN1-LIKE 1 (NHL1)","NDR1/HIN1-LIKE 1 (NHL1)"]
["AT3G11650","purple","Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus and spermine. Overexpression of the gene induces the expression of PR-1 gene and shows light-dependent 'speck disease-like' symptom on leaves. The gene product is localized to the chloroplast","NDR1/HIN1-LIKE 2 (NHL2)","NDR1/HIN1-LIKE 2 (NHL2)"]
["AT1G65690","purple","Encodes NHL6 (NDR1/HIN1-like 6). Plays an important role in the abiotic stresses-induced ABA signaling and biosynthesis, particularly during seed germination and early seedling development.","NDR1/HIN1-LIKE 6 (NHL6)","NDR1/HIN1-LIKE 6 (NHL6)"]
["AT1G07705","purple","NOT2 / NOT3 / NOT5 family;(source:Araport11)","NEGATIVE ON TATA LESS2A (NOT2A)","NEGATIVE ON TATA LESS2A (NOT2A)"]
["AT2G22560","purple","Kinase interacting (KIP1-like) family protein;(source:Araport11)","NETWORKED 2D (NET2D)","NETWORKED 2D (NET2D)"]
["AT1G51390","purple","Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU4 than to NFU1,2, and 3. Targeted to the mitochondrion. The mRNA is cell-to-cell mobile.","NFU DOMAIN PROTEIN 5 (NFU5)","NFU DOMAIN PROTEIN 5 (NFU5); (ATNFU1)"]
["AT5G64170","purple","LNK1 is a member of a small family (4 proteins) in Arabidopsis that have some overlap in function. LNK1 functions in the integration of light signaling and circadian clock. It is regulated by the clock TOC1 complex.Functions as a transcriptional coactivator.","NIGHT LIGHT-INDUCIBLE AND CLOCK-REGULATED GENE 1 (LNK1)","NIGHT LIGHT-INDUCIBLE AND CLOCK-REGULATED GENE 1 (LNK1)"]
["AT4G18350","purple","Encodes 9-<i>cis</i>-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene declines during the first 12h of imbibition.","NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 2 (NCED2)","NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 2 (NCED2);NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 2 (ATNCED2)"]
["AT3G24220","purple","A member of gene NCED-related gene family, encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene declines during the first 12h of imbibition.","NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 6 (NCED6)","NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 6 (NCED6);NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 6 (ATNCED6)"]
["AT1G52880","purple","Transcription factor with a NAC domain. Homologous to the petunia gene NAM which is required for the development of the shoot. Expressed in the embryo.","NO APICAL MERISTEM (NAM)","NO APICAL MERISTEM (NAM);ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 18 (anac018); (ATNAM);NAC-REGULATED SEED MORPHOLOGY 2 (NARS2)"]
["AT4G18910","purple","Encodes an aquaporin homolog. Functions in arsenite transport and tolerance.When expressed in yeast cells can conduct hydrogen peroxide into those cells.","NOD26-LIKE INTRINSIC PROTEIN 1;2 (NIP1;2)","NOD26-LIKE INTRINSIC PROTEIN 2 (ATNLM2);NOD26-LIKE INTRINSIC PROTEIN 2 (NLM2);NOD26-LIKE INTRINSIC PROTEIN 1;2 (NIP1;2)"]
["AT3G03530","purple","PHOSPHOESTERASE FAMILY PROTEIN, NPC4 is significantly induced upon phosphate starvation and plays an important role in the supply of inorganic phosphate and diacylglycerol from membrane-phospholipids during phosphate deprivation.Has a preference for glycosylinositolphosphorylceramide (GIPC) as a substrate.","NON-SPECIFIC PHOSPHOLIPASE C4 (NPC4)","NON-SPECIFIC PHOSPHOLIPASE C4 (NPC4); (ATNPC4)"]
["AT3G03540","purple","Encodes a nonspecific phospholipase C. Located in the cytosol. Involved in the conversion of phospholipids to glycolipids under phosphate deprivation conditions.","NON-SPECIFIC PHOSPHOLIPASE C5 (NPC5)","NON-SPECIFIC PHOSPHOLIPASE C5 (NPC5)"]
["AT1G54960","purple","member of MEKK subfamily","NPK1-RELATED PROTEIN KINASE 2 (NP2)","NPK1-RELATED PROTEIN KINASE 2 (ANP2);MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASES 2 (MAPKKK2);NPK1-RELATED PROTEIN KINASE 2 (NP2)"]
["AT4G30240","purple","Soluble N-ethylmaleimide-sensitive factor attachment protein receptor (SNARE)-like protein har\u0002boring a syntaxin-6 domain typical of proteins found in the endosomal transport vesicles; nuclear shuttle protein-interacting protein.","NSP-INTERACTING SYNTAXIN DOMAIN-CONTAINING PROTEIN (NISP)","NSP-INTERACTING SYNTAXIN DOMAIN-CONTAINING PROTEIN (NISP)"]
["AT1G73540","purple","nudix hydrolase homolog 21;(source:Araport11)","NUDIX HYDROLASE HOMOLOG 21 (NUDT21)","NUDIX HYDROLASE HOMOLOG 21 (NUDT21);NUDIX HYDROLASE HOMOLOG 21 (atnudt21)"]
["AT2G34160","purple","ALBA protein which forms a complex with ALBA1 that binds genic R-loops and safeguards genome stability.","NVOLVED IN RRNA PROCESSING 7 (IRP7)","NVOLVED IN RRNA PROCESSING 7 (IRP7); (ALBA2)"]
["AT1G34000","purple","Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions. Together with OHP1, OHP2 is essential for the formation of photosystem II reaction center, even though neither is a part of the final PSII RC. It forms a complex with OHP1 and HCF244, D1, D2, PsbI, and cytochrome b559 at an early stage of PSII de novo assembly and of PSII repair under high-light conditions.","ONE-HELIX PROTEIN 2 (OHP2)","ONE-HELIX PROTEIN 2 (OHP2)"]
["AT2G41230","purple","Encodes an ER-localized plant hormone-responsive gene and appears to act redundantly with ARGOS and ARL during organ growth. Over-expression modifies plant sensitivity to ethylene, leading to improved drought tolerance.","ORGAN SIZE RELATED 1 (OSR1)","ORGAN SIZE RELATED 1 (OSR1);ARGOS-LIKE2 (ARL2)"]
["AT2G41225","purple","Encodes a protein of unknown function that is involved in regulation of cell expansion. Based on sequence similarity OSR2 is localized to the plasma membrane. It is expressed in organs that are undergoing cell expansion. Over-expression modifies plant sensitivity to ethylene, leading to improved drought tolerance.","ORGAN SIZE RELATED 2 (OSR2)","ORGAN SIZE RELATED 2 (OSR2);ARGOS-LIKE3 (ARL3)"]
["AT1G79360","purple","organic cation/carnitine transporter 2;(source:Araport11)","ORGANIC CATION/CARNITINE TRANSPORTER 2 (OCT2)","ORGANIC CATION/CARNITINE TRANSPORTER 2 (ATOCT2);ORGANIC CATION TRANSPORTER 2 (OCT2);ORGANIC CATION/CARNITINE TRANSPORTER 2 (OCT2)"]
["AT1G73220","purple","Encodes Organic Cation Transporter 1 (OCT1), likely to be involved in polyamine transport.","ORGANIC CATION/CARNITINE TRANSPORTER1 (OCT1)","ORGANIC CATION/CARNITINE TRANSPORTER1 (AtOCT1);ORGANIC CATION/CARNITINE TRANSPORTER1 (OCT1)"]
["AT3G07680","purple","Encodes an Golgi-localized p24 protein. Interacts with p24delta5 at ER export sites for ER exit and coupled transport to the Golgi apparatus. The mRNA is cell-to-cell mobile.","P24 SUBFAMILY BETA 2 (P24BETA2)","P24 SUBFAMILY BETA 2 (P24BETA2)"]
["AT1G21900","purple","Encodes an ER-localized p24 protein. Interacts with p24beta2 at ER export sites for ER exit and coupled transport to the Golgi apparatus. Once in the Golgi, p24delta5 interacts very efficiently with the COPI machinery for retrograde transport back to the ER.","P24 SUBFAMILY DELTA 5 (P24DELTA5)","P24 SUBFAMILY DELTA 5 (P24DELTA5)"]
["AT4G37050","purple","Patatin-related phospholipase A. Expressed in the floral gynaecium and is induced by abscisic acid (ABA) or phosphate deficiency in roots.","PATATIN-LIKE PROTEIN 4 (PLP4)","PATATIN-LIKE PROTEIN 4 (PLP4); (PLA V);PHOSPHOLIPASE A IVC (AtPLAIVC);PATATIN-RELATED PHOSPHOLIPASE III BETA (PLAIII{beta})"]
["AT5G45280","purple","Pectin acetylesterase involved in pectin remodelling.","PECTIN ACETYLESTERASE 11 (PAE11)","PECTIN ACETYLESTERASE 11 (PAE11)"]
["AT3G60730","purple","Pectin methylesterase inhibitor; INVI-PMEI protein isoform which clustered with a PME.","PECTIN METHYL ESTERASE INHIBITOR-PECTIN METHYLESTERASE 65 (PMEI-PME65)","PECTIN METHYL ESTERASE INHIBITOR-PECTIN METHYLESTERASE 65 (PMEI-PME65)"]
["AT1G23200","purple","ProPME pectin methyl esterase involved in embryo development, stomatal function, mucilage release.","HIGHLY METHYL ESTERIFIED SEEDS (HMS)","PECTIN METHYLESTERASE6 (PME6);HIGHLY METHYL ESTERIFIED SEEDS (HMS)"]
["AT5G09310","purple","Encodes a gamma-secretase subunit. Associates with other subunits in intracellular membrane compartments.","PEN-2 (PEN-2)","PEN-2 (PEN-2)"]
["AT1G06580","purple","Pentatricopeptide Repeat Protein. During pathogen infection its mRNA is cleaved by MIR400 which down regulates its expression. Mutants are more susceptible to infection ny bacteria.","PENTATRICOPEPTIDE REPEAT 1 (PPR1)","PENTATRICOPEPTIDE REPEAT 1 (PPR1)"]
["AT3G22470","purple","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)","PENTATRICOPEPTIDE REPEAT 3 (PPR3)","PENTATRICOPEPTIDE REPEAT 3 (PPR3)"]
["AT1G11630","purple","Ribosomal pentatricopeptide repeat protein","PENTATRICOPEPTIDE REPEAT 336 (PPR336L)","PENTATRICOPEPTIDE REPEAT 336 (PPR336L)"]
["AT5G49570","purple","Encodes a protein that has peptide:N-glycanase activity in enzymatic assay in heterologous systems (although the activity was not detected in wild-type plants).","PEPTIDE-N-GLYCANASE 1 (PNG1)","PEPTIDE-N-GLYCANASE 1 (PNG1);PEPTIDE-N-GLYCANASE 1 (AtPNG1)"]
["AT2G20100","purple","Together with PFA1 and PFA3 governs the competence of pericycle cells to initiate lateral root primordium formation.","UNKNOWN TRANSCRIPTION FACTOR 1 (UKTF1)","PERICYCLE FACTOR TYPE-A 2 (PFA2);UNKNOWN TRANSCRIPTION FACTOR 1 (UKTF1)"]
["AT3G20640","purple","Governs the competence of pericycle cells to initiate lateral root primordium formation.","PERICYCLE FACTOR TYPE-A 6 (PFA6)","PERICYCLE FACTOR TYPE-A 6 (PFA6)"]
["AT5G05340","purple","Encodes a protein with sequence similarity to peroxidases that is involved in lignin biosynthesis. Loss of function mutations show abnormal development of xylem fibers and reduced levels of lignin biosynthetic enxymes.","PEROXIDASE 52 (PRX52)","PEROXIDASE 52 (PRX52)"]
["AT3G06050","purple","Encodes a mitochondrial matrix localized peroxiredoxin involved in redox homeostasis. Knockout mutants have reduced root growth under certain oxidative stress conditions.","PEROXIREDOXIN IIF (PRXIIF)","PEROXIREDOXIN IIF (PRXIIF);PEROXIREDOXIN IIF (ATPRXIIF)"]
["AT2G02360","purple","Encodes an F-box protein containing a Nictaba-related lectin domain that can act as a carbohydrate-binding protein.Expression is induced by SA and pathogenic bacteria.","PHLOEM PROTEIN 2-B10 (PP2-B10)","PHLOEM PROTEIN 2-B10 (AtPP2-B10);PHLOEM PROTEIN 2-B10 (PP2-B10)"]
["AT1G09155","purple","phloem protein 2-B15;(source:Araport11)","PHLOEM PROTEIN 2-B15 (PP2-B15)","PHLOEM PROTEIN 2-B15 (PP2-B15);PHLOEM PROTEIN 2-B15 (AtPP2-B15)"]
["AT3G23430","purple","Encodes a protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains. The mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. Its expression is repressed by phosphate (Pi) in shoots, and transiently induced by phosphite (Phi) in roots and shoots. PHO is expressed in developing ovules and plays a role in the transfer of Ph from maternal tissues to filial tissues.","PHOSPHATE 1 (PHO1)","PHOSPHATE 1 (PHO1);ARABIDOPSIS PHOSPHATE 1 (ATPHO1)"]
["AT1G73010","purple","Encodes PPsPase1, a pyrophosphate-specific phosphatase catalyzing the specific cleavage of pyrophosphate (Km 38.8 uM) with an alkaline catalytic pH optimum. Expression is upregulated in the shoot of cax1/cax3 mutant.","PHOSPHATE STARVATION-INDUCED GENE 2 (PS2)","PHOSPHATE STARVATION-INDUCED GENE 2 (ATPS2);PHOSPHATE STARVATION-INDUCED GENE 2 (PS2);PYROPHOSPHATE-SPECIFIC PHOSPHATASE1 (PPsPase1);PYROPHOSPHATE-SPECIFIC PHOSPHATASE1 (AtPPsPase1); (PECP2)"]
["AT3G52190","purple","Encodes a plant specific protein structurally related to the SEC12 proteins of the early secretory pathway. Mutation of PHF1 impairs Pi transport. Expression was detected in all tissues, and was induced by Pi starvation. Localized in endoplasmic reticulum (ER), and mutation of PHF1 resulted in ER retention and reduced accumulation of the plasma membrane PHT1;1 transporter. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in shoots.","PHOSPHATE TRANSPORTER TRAFFIC FACILITATOR1 (PHF1)","PHOSPHATE TRANSPORTER TRAFFIC FACILITATOR1 (PHF1); (AtPHF1)"]
["AT5G42740","purple","Cytosolic phosphoglucose isomerase.Essential gene.","PHOSPHOGLUCOSE ISOMERASE (CPGI)","PHOSPHOGLUCOSE ISOMERASE (CPGI)"]
["ATCG00020","purple","Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core","PHOTOSYSTEM II REACTION CENTER PROTEIN A (PSBA)","PHOTOSYSTEM II REACTION CENTER PROTEIN A (PSBA)"]
["AT4G14330","purple","Orphan kinesin with processive motility on single microtubules.","PHRAGMOPLAST-ASSOCIATED KINESIN-RELATED PROTEIN 2 (PAKRP2)","PHRAGMOPLAST-ASSOCIATED KINESIN-RELATED PROTEIN 2 (PAKRP2)"]
["AT1G54570","purple","Encodes a protein with phytyl ester synthesis and diacylglycerol acyltransferase activities that is involved in the deposition of free phytol and free fatty acids in the form of phytyl esters in chloroplasts, a process involved in maintaining the integrity of the photosynthetic membrane during abiotic stress and senescence.","PHYTYL ESTER SYNTHASE 1 (PES1)","PHYTYL ESTER SYNTHASE 1 (PES1)"]
["AT4G03960","purple","Encodes an atypical dual-speci&#64257;city phosphatase involved in the negative regulation of defense response to a bacterial pathogen, P. syringae pv. tomato.","PLANT AND FUNGI ATYPICAL DUAL-SPECI&#64257;CITY PHOSPHATASE 4 (PFA-DSP4)","PLANT AND FUNGI ATYPICAL DUAL-SPECI&#64257;CITY PHOSPHATASE 4 (PFA-DSP4); (AtPFA-DSP4)"]
["AT3G22590","purple","Encodes PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP), a homolog of human Paf1 Complex (Paf1C) subunit Parafibromin. Human Parafibromin assists in mediating output from the Wnt signaling pathway, and dysfunction of the encoding gene HRPT2 conditions specific cancer-related disease phenotypes. PHP resides in a ~670-kDa protein complex in nuclear extracts, and physically interacts with other known Paf1C-related proteins in vivo. Loss of PHP specifically conditioned accelerated phase transition from vegetative growth to flowering and resulted in misregulation of a very limited subset of genes that included the flowering repressor FLOWERING LOCUS C (FLC). Member of PAF-C complex.","PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP)","PLANT HOMOLOGOUS TO PARAFIBROMIN (PHP); (CDC73)"]
["AT3G07360","purple","Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.","PLANT U-BOX 9 (PUB9)","PLANT U-BOX 9 (PUB9);ARABIDOPSIS THALIANA PLANT U-BOX 9 (ATPUB9)"]
["AT5G44610","purple","Encodes a protein with seven repeated VEEKK motifs. RNAi and overexpression experiments suggest that the gene is not involved in cell division but might be consequential for cell shape of epidermal and cortical cells. The protein encoded by this gene binds to cortical microtubules and inhibits tubulin polymerization. Associates to the plasma membrane and interacts with calmodulin and phosphatidylinositol phosphates, indicating an involvement in cellular signal transduction. Expression is enhanced by abiotic and hormonal factors. Induced during senescence.Interacts with Ca2+/calmodulin complex, phosphatidylinositol phosphates, and free Ca2+.","MICROTUBULE-ASSOCIATED PROTEIN 18 (MAP18)","PLASMA MEMBRANE ASSOCIATED CA2+-BINDING PROTEIN-2 (PCAP2);MICROTUBULE-ASSOCIATED PROTEIN 18 (MAP18)"]
["AT5G43980","purple","Encodes a plasmodesmal protein that affects the intercellular movement of molecules through the plasmodesmata. The cytoplasmic C-terminal portion of the protein is connected to the apoplastic N-terminal portion of the protein by a single transmembrane domain (TMD). It is transported to the plasmodesmata through the secretory pathway. PDLP1 has two DUF26 domains and a signal peptide, but the proper localization of the protein appears to depend on the TMD.","PLASMODESMATA-LOCATED PROTEIN 1 (PDLP1)","PLASMODESMATA-LOCATED PROTEIN 1A (PDLP1A);PLASMODESMATA-LOCATED PROTEIN 1 (PDLP1)"]
["AT3G02150","purple","a chloroplast trans-acting factor of the psbD light-responsive promoter.TCP gene involved in heterochronic control of leaf differentiation.","PLASTID TRANSCRIPTION FACTOR 1 (PTF1)","PLASTID TRANSCRIPTION FACTOR 1 (PTF1); (TFPD); (A-PTF-1); (BHLHB1)"]
["AT2G29940","purple","pleiotropic drug resistance 3;(source:Araport11)","ATP-BINDING CASSETTE G31 (ABCG31)","PLEIOTROPIC DRUG RESISTANCE 3 (PDR3);PLEIOTROPIC DRUG RESISTANCE 3 (ATPDR3);ATP-BINDING CASSETTE G31 (ABCG31)"]
["AT1G71770","purple","Encodes a Class I polyA-binding protein. Expressed in floral organs. Binds polyA sepharose in vitro.","POLY(A)-BINDING PROTEIN 5 (PAB5)","POLY(A)-BINDING PROTEIN 5 (PAB5)"]
["AT2G43020","purple","Encodes a polyamine oxidase.","POLYAMINE OXIDASE 2 (PAO2)","POLYAMINE OXIDASE 2 (ATPAO2);POLYAMINE OXIDASE 2 (PAO2)"]
["AT3G13620","purple","Encodes POLYAMINE UPTAKE TRANSPORTER 4, an amino acid permease family protein.","POLYAMINE UPTAKE TRANSPORTER 4 (PUT4)","POLYAMINE UPTAKE TRANSPORTER 4 (PUT4)"]
["AT5G53180","purple","Encodes one of the two polypyrimidine tract-binding (PTB) protein homologs in the Arabidopsis genome. Double mutants have defects in pollen germination.","POLYPYRIMIDINE TRACT-BINDING PROTEIN 2 (PTB2)","POLYPYRIMIDINE TRACT-BINDING PROTEIN 2 (ATPTB2);POLYPYRIMIDINE TRACT-BINDING PROTEIN 2 (PTB2)"]
["AT3G47640","purple","Encodes POPEYE (PYE), a bHLH transcription factor regulating response to iron deficiency in Arabidopsis roots.","POPEYE (PYE)","POPEYE (PYE)"]
["AT2G18740","purple","Putative temperature-specific splice regulator of development. Only the first splice form (PCP-alpha) has this function as result of C-terminal addition. Controls the splicing of many pre-mRNAs under chilling stress. Important to maintain proper ratio of the two COP1 splicing variants (COP1a/COP1b) to fine tune the level of HY5.","PORCUPINE (PCP)","PORCUPINE (PCP);SM PROTEIN E1 (SME1); (SMEB)"]
["AT3G56110","purple","prenylated RAB acceptor 1.B1;(source:Araport11)","PRENYLATED RAB ACCEPTOR 1.B1 (PRA1.B1)","PRENYLATED RAB ACCEPTOR 1.B1 (PRA1.B1)"]
["AT2G40380","purple","prenylated RAB acceptor 1.B2;(source:Araport11)","PRENYLATED RAB ACCEPTOR 1.B2 (PRA1.B2)","PRENYLATED RAB ACCEPTOR 1.B2 (PRA1.B2)"]
["AT2G39890","purple","Encodes a proline transporter with affinity for gly betaine, proline and GABA. Protein is expressed in the vascular tissue, specifically the phloem.","PROLINE TRANSPORTER 1 (PROT1)","PROLINE TRANSPORTER 1 (PROT1);PROLINE TRANSPORTER 1 (ATPROT1)"]
["AT3G24550","purple","Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807). The mRNA is cell-to-cell mobile.","PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 1 (PERK1)","PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 1 (ATPERK1);PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 1 (PERK1)"]
["AT5G09530","purple","The gene encodes a unique protein which contains 36 repeats of a unique pentapeptide (Pro-Glu-Leu|Ile|Val-Pro-Lys). It has been shown tobe involved in growth and development.","PRO-GLU-LEU|ILE|VAL-PRO-LYS 1 (PELPK1)","PROLINE-RICH PROTEIN 10 (PRP10);PRO-GLU-LEU|ILE|VAL-PRO-LYS 1 (PELPK1)"]
["AT1G16470","purple","Encodes 20S proteasome subunit PAB1 (PAB1).","PROTEASOME SUBUNIT PAB1 (PAB1)","PROTEASOME SUBUNIT PAB1 (PAB1)"]
["AT1G68820","purple","Putative C3HC4 zinc-finger ubiquitin E3 ligase, negative regulator in ABA and drought stress response. May act as a positive role in regulating the high temperature by mediating the degradation of unknown target proteins.","PROTEIN WITH THE RING DOMAIN AND TMEMB_185A 1 (PPRT1)","PROTEIN WITH THE RING DOMAIN AND TMEMB_185A 1 (PPRT1)"]
["AT1G32100","purple","Encodes a pinoresinol reductase involved in lignan biosynthesis. Expressed strongly in roots and less strongly in stems. Shows specificity for pinoresinol and not lariciresinol.","PINORESINOL REDUCTASE 1 (PRR1)","PSEUDO-RESPONSE REGULATOR 1 (PRR1); (ATPRR1);PINORESINOL REDUCTASE 1 (PRR1)"]
["AT2G24220","purple","Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.","PURINE PERMEASE 5 (PUP5)","PURINE PERMEASE 5 (PUP5)"]
["AT3G52820","purple","purple acid phosphatase 22;(source:Araport11)","PURPLE ACID PHOSPHATASE 22 (PAP22)","PURPLE ACID PHOSPHATASE 22 (ATPAP22);PURPLE ACID PHOSPHATASE 22 (PAP22)"]
["AT5G50400","purple","purple acid phosphatase 27;(source:Araport11)","PURPLE ACID PHOSPHATASE 27 (PAP27)","PURPLE ACID PHOSPHATASE 27 (PAP27);ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 27 (ATPAP27)"]
["AT2G03450","purple","Purple acid phosphatase, tail anchored protein targeted to the outer chloroplast membrane. Involved in import of Rubisco small subunit proteins into the chloroplast.","PURPLE ACID PHOSPHATASE 9 (PAP9)","PURPLE ACID PHOSPHATASE 9 (PAP9);PURPLE ACID PHOSPHATASE 9 (ATPAP9)"]
["AT1G73000","purple","Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.","PYR1-LIKE 3 (PYL3)","PYR1-LIKE 3 (PYL3);REGULATORY COMPONENTS OF ABA RECEPTOR 13 (RCAR13)"]
["AT3G08860","purple","Encodes a protein that is predicted to have beta-alanine aminotransferase activity.","PYRIMIDINE 4 (PYD4)","PYRIMIDINE 4 (PYD4)"]
["AT3G53620","purple","Encodes a soluble protein with inorganic pyrophosphatase activity that is highly specific for Mg-inorganic pyrophosphate. The mRNA is cell-to-cell mobile.","PYROPHOSPHORYLASE 4 (PPa4)","PYROPHOSPHORYLASE 4 (PPa4);PYROPHOSPHORYLASE 4 (AtPPa4)"]
["AT4G15530","purple","Encodes a dual-targeted protein believed to act as a pyruvate, orthophosphate dikinase. These enzymes are normally associated with C4 photosynthesis which does not occur in Arabidopsis. However, PPDK may play a role in remobilizing nitrogen during leaf senescence in Arabidopsis. The product of the long transcript (.1 gene model) was shown to be targeted to the chloroplast, whereas the shorter transcript (no targeting sequence) accumulates in the cytosol. The two proteins were also found to be expressed in slightly different tissues.","PYRUVATE ORTHOPHOSPHATE DIKINASE (PPDK)","PYRUVATE ORTHOPHOSPHATE DIKINASE (PPDK)"]
["AT2G31680","purple","RAB GTPase homolog A5D;(source:Araport11)","RAB GTPASE HOMOLOG A5D (RABA5d)","RAB GTPASE HOMOLOG A5D (AtRABA5d);RAB GTPASE HOMOLOG A5D (RABA5d)"]
["AT3G09910","purple","RAB GTPase homolog C2B;(source:Araport11)","RAB GTPASE HOMOLOG C2B (RABC2b)","RAB GTPASE HOMOLOG C2B (ATRABC2B); (ATRAB18C);RAB GTPASE HOMOLOG C2B (RABC2b)"]
["AT1G16190","purple","Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.","RADIATION SENSITIVE23A (RAD23A)","RADIATION SENSITIVE23A (RAD23A)"]
["AT5G65830","purple","receptor like protein 57;(source:Araport11)","RECEPTOR LIKE PROTEIN 57 (RLP57)","RECEPTOR LIKE PROTEIN 57 (RLP57);RECEPTOR LIKE PROTEIN 57 (ATRLP57)"]
["AT4G35870","purple","early-responsive to dehydration stress protein (ERD4);(source:Araport11)","REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 4.1 (OSCA4.1)","REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 4.1 (OSCA4.1); (GFS10); (MTV14)"]
["AT5G41040","purple","Encodes a feruloyl-CoA transferase required for suberin synthesis. Has feruloyl-CoA-dependent feruloyl transferase activity towards substrates with a primary alcohol.","REDUCED LEVELS OF WALL-BOUND PHENOLICS 1 (RWP1)","REDUCED LEVELS OF WALL-BOUND PHENOLICS 1 (RWP1);HYDROXYCINNAMOYL- COA:&OMEGA;-HYDROXYACID O-HYDROXYCINNAMOYLTRANSFERASE (HHT);ALIPHATIC SUBERIN FERULOYL-TRANSFERASE (ASFT)"]
["AT2G34410","purple","Encodes a homolog of the protein Cas1p known to be involved in polysaccharide O-acetylation in Cryptococcus neoformans. Has high similarity to RWA2 whose mutant displays reduced acetylation. The protein is expressed in the Golgi and is involved in the acetylation of xylan during secondary wall biosynthesis.","REDUCED WALL ACETYLATION 3 (RWA3)","REDUCED WALL ACETYLATION 3 (RWA3)"]
["AT1G31340","purple","Encodes a ubiquitin-related protein that is conjugated to target proteins by neddylation. It has been shown to be conjugated to the cullin AtCUL1. The RUB-conjugation pathway has been implicated in in auxin response.","RELATED TO UBIQUITIN 1 (RUB1)","RELATED TO UBIQUITIN 1 (RUB1);ARABIDOPSIS THALIANA RELATED TO UBIQUITIN 1 (ATRUB1); (NEDD8)"]
["AT4G22790","purple","Encodes a plasma membrane localized MATE type transporter that is involved in CO2 signaling during stomatal aperture regulation. RHC1 regulates HT1 which phosphorylates OST1, a kinase that regulates the SLAC1 anion channel and thus stomatal closing.","RESISTANT TO HIGH CO2 (RHC1)","RESISTANT TO HIGH CO2 (RHC1)"]
["AT2G40670","purple","response regulator 16","RESPONSE REGULATOR 16 (RR16)","RESPONSE REGULATOR 16 (RR16)"]
["AT5G24660","purple","RESPONSE TO LOW SULFUR gene family member; expressed during sulfur deficiency. Part of an important plant defense mechanism that occurs in guard cells to prevent the entry of bacterial pathogens. Works as an integrator of light and chloroplast signaling.","RESPONSE TO LOW SULFUR 2 (LSU2)","RESPONSE TO LOW SULFUR 2 (LSU2)"]
["AT5G24655","purple","RESPONSE TO LOW SULFUR gene family member; expressed during sulfur deficiency. Coordinator of nutrient demand and flowering. LSU1 overexpressor lines present an enhanced disease resistance phenotype under standard conditions, as well as under conditions of abiotic stress.","RESPONSE TO LOW SULFUR 4 (LSU4)","RESPONSE TO LOW SULFUR 4 (LSU4)"]
["AT2G33380","purple","Encodes a calcium binding protein whose mRNA is induced upon treatment with NaCl, ABA and in response to desiccation. mRNA expression under drought conditions is apparent particularly in leaves and flowers. Isoform of caleosin with a role as a peroxygenase involved in oxylipin metabolism during biotic and abiotic stress. Involved in the production of 2-hydroxy-octadecatrienoic acid. The peroxygenase has a narrow substrate specificity thus acting as a fatty acid hydroperoxide reductase in vivo.","RESPONSIVE TO DESICCATION 20 (RD20)","RESPONSIVE TO DESICCATION 20 (RD20);CALEOSIN 3 (CLO-3);CALEOSIN 3 (CLO3);ARABIDOPSIS THALIANA CALEOSIN 3 (AtCLO3); (ATRD20);PEROXYGENASE 3 (PXG3)"]
["AT1G12300","purple","RFL2 is a pentatricopeptide repeat protein involved in mitochondrial RNA processing.","RESTORER-OF-FERTILITY-LIKE 2 (RFL2)","RESTORER-OF-FERTILITY-LIKE 2 (RFL2)"]
["AT5G50750","purple","RGP4 is a reversibly glycosylated polypeptide. Analyses using tagged RGP4 suggest that it is present in the cytosol and in association with the Golgi apparatus. Recombinant RGP4 does not have UDP-arabinose mutase activity based on an in vitro assay even though the related RGP1, RGP2, and RGP3 proteins do have activity in the same assay. RGP4 can form complexes with RGP1 and RGP2. RGP4 is expressed during seed development.","REVERSIBLY GLYCOSYLATED POLYPEPTIDE 4 (RGP4)","REVERSIBLY GLYCOSYLATED POLYPEPTIDE 4 (RGP4)"]
["AT2G22620","purple","Rhamnogalacturonate lyase family protein;(source:Araport11)","RHAMNOGALACTURONAN LYASE6 (RGIL6)","RHAMNOGALACTURONAN LYASE6 (RGIL6)"]
["AT3G53780","purple","RHOMBOID-like protein 4;(source:Araport11)","RHOMBOID-LIKE PROTEIN 4 (RBL4)","RHOMBOID-LIKE PROTEIN 4 (ATRBL4);RHOMBOID-LIKE PROTEIN 4 (RBL4)"]
["AT2G02990","purple","Encodes a member of the ribonuclease T2 family that responds to inorganic phosphate starvation, and inhibits production of anthocyanin. Also involved in wound-induced signaling independent of jasmonic acid. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in roots.","RIBONUCLEASE 1 (RNS1)","RIBONUCLEASE 1 (ATRNS1);RIBONUCLEASE 1 (RNS1)"]
["AT1G26820","purple","Encodes ribonuclease RNS3.","RIBONUCLEASE 3 (RNS3)","RIBONUCLEASE 3 (RNS3)"]
["AT5G63970","purple","Encodes a ubiquitin ligase that is an essential upstream modulator of JA signaling in response to various stimuli.","RING DOMAIN LIGASE 3 (RGLG3)","RING DOMAIN LIGASE 3 (RGLG3)"]
["AT5G20570","purple","Encodes a ring-box 1 like protein and component of the SCF ubiquitinization complex mediating auxin responses. Forms a E3 ubiquitin ligase complex with CUL3A and At1g21780.1 a BTB domain protein.","RING-BOX 1 (RBX1)","RING-BOX 1 (RBX1); (HRT1);RING-BOX 1 (ATRBX1);REGULATOR OF CULLINS-1 (ROC1)"]
["AT1G62930","purple","RPF3 encodes a pentatricopeptide repeat (PPR) protein involved in 5' processing of different mitochondrial mRNAs.","RNA PROCESSING FACTOR 3 (RPF3)","RNA PROCESSING FACTOR 3 (RPF3)"]
["AT4G28010","purple","PPRP involved in processing of nad6,atp9 and 26S RNAs.","RNA PROCESSING FACTOR 5 (RPF5)","RNA PROCESSING FACTOR 5 (RPF5)"]
["AT1G63130","purple","Transacting siRNA generating locus. Its derived siR9as targets AT1G62930 for cleavage. Itself is targeted by TAS2-derived ta-siR2140 for cleavage.","RNA PROCESSING FACTOR 6 (RPF6)","RNA PROCESSING FACTOR 6 (RPF6)"]
["AT1G64440","purple","Encodes a protein with UDP-D-glucose 4-epimerase activity. Mutants in RHD1 have abnormally shaped root hairs with a bulbous region at the base. Allelic to REB1 encoding a UDP-D-glucose 4-epimerase involved in cell wall biosynthesis.Involved in growth and cell wall carbohydrate biosynthesis.","ROOT HAIR DEFECTIVE 1 (RHD1)","ROOT HAIR DEFECTIVE 1 (RHD1);ROOT EPIDERMAL BULGER1 (REB1);UDP-GLUCOSE 4-EPIMERASE (UGE4)"]
["AT1G19900","purple","RUBY encodes a secreted galactose oxidase involved in cell wall modification.","RUBY PARTICLES IN MUCILAGE (RUBY)","RUBY PARTICLES IN MUCILAGE (RUBY)"]
["AT2G01640","purple","Nucleolar protein involved in ribosome biogenesis.","SALT HYPERSENSITIVE 1 (SAHY1)","SALT HYPERSENSITIVE 1 (SAHY1)"]
["AT5G35410","purple","encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition","SALT OVERLY SENSITIVE 2 (SOS2)","SALT OVERLY SENSITIVE 2 (SOS2);SALT OVERLY SENSITIVE 2 (ATSOS2);CBL-INTERACTING PROTEIN KINASE 24 (CIPK24);SNF1-RELATED PROTEIN KINASE 3.11 (SnRK3.11)"]
["AT5G22270","purple","hypothetical protein;(source:Araport11)","SALT-INDUCED AND EIN3/EIL1-DEPENDENT 1 (SIED1)","SALT-INDUCED AND EIN3/EIL1-DEPENDENT 1 (SIED1)"]
["AT1G27760","purple","Encodes a protein with similarity to human interferon-related developmental regulator (IFRD)that is involved in salt tolerance. Loss of function mutations are hypersensitive to salt stress and have reduced fertility. SAT32 is found in the cytoplasm but appears to translocate to the nucleus when plants are subject to salt stress.","SALT-TOLERANCE 32 (SAT32)","SALT-TOLERANCE 32 (ATSAT32);SALT-TOLERANCE 32 (SAT32)"]
["AT5G07190","purple","Gene is expressed preferentially in the embryo and encodes a unique protein of unknown function.","SEED GENE 3 (ATS3)","SEED GENE 3 (ATS3)"]
["AT4G27150","purple","Seed storage albumin protein.","SEED STORAGE ALBUMIN 2 (SESA2)","SEED STORAGE ALBUMIN 2 (SESA2); (AT2S2)"]
["AT4G09960","purple","Encodes a MADS box transcription factor expressed in the carpel and ovules. Plays a maternal role in fertilization and seed development. Controls the structure and mechanical properties of the seed coat. Controls fruit size by regulating cytokinin levels and FRUITFULL.Binds upstream of several cell wall modifying enzymes including PMEI6 and XYL1 and regulates their expression.","SEEDSTICK (STK)","SEEDSTICK (STK)"]
["AT5G13170","purple","Encodes a member of the SWEET sucrose efflux transporter family proteins.","SENESCENCE-ASSOCIATED GENE 29 (SAG29)","SENESCENCE-ASSOCIATED GENE 29 (SAG29); (AtSWEET15); (SWEET15)"]
["AT3G02310","purple","MADS-box protein, binds K domain of AG in vivo","SEPALLATA 2 (SEP2)","SEPALLATA 2 (SEP2);AGAMOUS-LIKE 4 (AGL4)"]
["AT3G12203","purple","serine carboxypeptidase-like 17;(source:Araport11)","SERINE CARBOXYPEPTIDASE-LIKE 17 (scpl17)","SERINE CARBOXYPEPTIDASE-LIKE 17 (scpl17)"]
["AT1G11080","purple","serine carboxypeptidase-like 31;(source:Araport11)","SERINE CARBOXYPEPTIDASE-LIKE 31 (scpl31)","SERINE CARBOXYPEPTIDASE-LIKE 31 (scpl31)"]
["AT3G12800","purple","short-chain dehydrogenase-reductase B;(source:Araport11)","SHORT-CHAIN DEHYDROGENASE-REDUCTASE B (SDRB)","SHORT-CHAIN DEHYDROGENASE-REDUCTASE B (SDRB); (DECR)"]
["AT5G04470","purple","Encodes a novel nuclear 14-kD protein containing a cyclin binding motif and a motif found in ICK/KRP cell cycle inhibitor proteins. It is required for coordinating cell division and cell differentiation during the development of Arabidopsis trichomes, playing a key role in the mitosis-to-endoreduplication transition. It interacts with D-type cyclins in vivo.","SIAMESE (SIM)","SIAMESE (SIM)"]
["AT1G15310","purple","54 kDa protein subunit of SRP that interacts with the signal peptide of secreted proteins","SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT (ATHSRP54A)","SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT (ATHSRP54A);SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT (SRP54-1)"]
["AT1G70440","purple","Encodes a protein with similarity to RCD1 but without the WWE domain. The protein does have a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.","SIMILAR TO RCD ONE 3 (SRO3)","SIMILAR TO RCD ONE 3 (SRO3)"]
["AT2G22990","purple","sinapoylglucose:malate sinapoyltransferase. Catalyzes the formation of sinapoylmalate from sinapoylglucose. Mutants accumulate excess sinapoylglucose.","SINAPOYLGLUCOSE 1 (SNG1)","SINAPOYLGLUCOSE 1 (SNG1);SERINE CARBOXYPEPTIDASE-LIKE 8 (SCPL8)"]
["AT4G20310","purple","Encodes a Golgi-localized protease that can cleave the transcription factors bZIP17 and bZIP28 that are translocated from the ER through the Golgi so that the transcription factors can be released to translocate into the nucleus.","SITE 2 PROTEASE (S2P)","SITE 2 PROTEASE (S2P)"]
["AT5G24030","purple","Encodes a protein with ten predicted transmembrane helices. The SLAH3 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. Although it is not expressed in guard cells, it can complement an slac1-2 mutant suggesting that it performs a similar function. SLAH3:GFP localizes to the plasma membrane.","SLAC1 HOMOLOGUE 3 (SLAH3)","SLAC1 HOMOLOGUE 3 (SLAH3)"]
["AT3G61360","purple","Encodes SLO3 (SLOW GROWTH3), a pentatricopeptide repeat protein required for the splicing of mitochondrial NADH dehydrogenase subunit7 intron 2. Mutants have smaller RAMs are slower growing than wild type.","SLOW GROWTH3 (SLO3)","SLOW GROWTH3 (SLO3)"]
["AT3G12830","purple","SAUR-like auxin-responsive protein family;(source:Araport11)","SMALL AUXIN UPREGULATED 72 (SAUR72)","SMALL AUXIN UPREGULATED 72 (SAUR72)"]
["AT5G53590","purple","SAUR-like auxin-responsive protein family;(source:Araport11)","SMALL AUXIN UPREGULATED RNA 30 (SAUR30)","SMALL AUXIN UPREGULATED RNA 30 (SAUR30)"]
["AT1G69170","purple","Encodes SPL6. Required for the resistance mediated by the TIR-NB-LRR RPS4 against Pseudomonas syringae carrying the avrRps4 effector. Transcriptome analysis indicates that SPL6 positively regulates a subset of defense genes.","SQUAMOSA PROMOTER BINDING PROTEIN (SBP)-DOMAIN TRANSCRIPTION FACTOR 6 (SPL6)","SQUAMOSA PROMOTER BINDING PROTEIN (SBP)-DOMAIN TRANSCRIPTION FACTOR 6 (SPL6); (ATSPL6)"]
["AT3G02580","purple","Brassinosteroid biosynthetic enzyme, catalyzes delta7 sterol C-5 desaturation step. Mutant has dwarf phenotype.","STEROL 1 (STE1)","STEROL 1 (STE1);DWARF 7 (DWF7);BOULE 1 (BUL1)"]
["AT1G07420","purple","Arabidopsis thaliana sterol 4-alpha-methyl-oxidase mRNA. The sterol 4alpha-methyl oxidase2 family proteins SMO2-1 and SMO2-2 function partially through effects on auxin accumulation, auxin response and PIN1 expression to regulate embryogenesis in Arabidopsis.","STEROL 4-ALPHA-METHYL-OXIDASE 2-1 (SMO2-1)","STEROL 4-ALPHA-METHYL-OXIDASE 2 (ATSMO2);ARABIDOPSIS THALIANA STEROL 4-ALPHA-METHYL OXIDASE 1 (ATSMO1);STEROL 4-ALPHA-METHYL-OXIDASE 2-1 (SMO2-1)"]
["AT1G74020","purple","Encodes AtSS-2 strictosidine synthase.","STRICTOSIDINE SYNTHASE 2 (SS2)","STRICTOSIDINE SYNTHASE 2 (SS2)"]
["AT4G08390","purple","Encodes a chloroplastic stromal ascorbate peroxidase sAPX. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. The mRNA is cell-to-cell mobile.","STROMAL ASCORBATE PEROXIDASE (SAPX)","STROMAL ASCORBATE PEROXIDASE (SAPX)"]
["AT4G03390","purple","Membrane localized putative receptor kinase involved in iron homeostasis and regulation of callose deposition.","STRUBBELIG-RECEPTOR FAMILY 3 (SRF3)","STRUBBELIG-RECEPTOR FAMILY 3 (SRF3)"]
["AT5G20830","purple","Encodes a protein with sucrose synthase activity (SUS1).","SUCROSE SYNTHASE 1 (SUS1)","SUCROSE SYNTHASE 1 (SUS1);SUCROSE SYNTHASE 1 (SUSY1); (atsus1); (ASUS1)"]
["AT1G22882","purple","Encodes a member of the mid-SUN subfamily of SUN-domain proteins that is localized to both the nuclear envelope and the ER. It is involved in early seed development and nuclear morphology. Secreted peptide which functions in plant growth and pathogen defense.","SUN-DOMAIN PROTEIN 3 (SUN3)","SUN-DOMAIN PROTEIN 3 (SUN3); (STMP1); (ATSUN3)"]
["AT5G48870","purple","SAD1 encodes a polypeptide similar to multifunctional Sm-like snRNP proteins that are required for mRNA splicing, export, and degradation. Mutation in this gene increases plant sensitivity to drought stress and ABA in seed germination, root growth, and the expression of some stress-responsive genes.","SUPERSENSITIVE TO ABA AND DROUGHT 1 (SAD1)","SUPERSENSITIVE TO ABA AND DROUGHT 1 (SAD1); (ATLSM5);SM-LIKE 5 (LSM5); (ATSAD1)"]
["AT2G27600","purple","Encodes a SKD1 (Suppressor of K+ Transport Growth Defect1) homolog. Localized to the cytoplasm and to multivesicular endosomes. Involved in multivesicular endosome function. The mRNA is cell-to-cell mobile.","SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1 (SKD1)","SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1 (SKD1);VACUOLAR PROTEIN SORTING 4 (VPS4); (ATSKD1)"]
["AT1G28490","purple","Encodes SYP61, one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed. SYP61 and SYP121 coordinate the trafficking of plasma membrane aquaporin PIP2;7 to modulate the cell membrane water permeability.","SYNTAXIN OF PLANTS 61 (SYP61)","SYNTAXIN OF PLANTS 61 (SYP61); (ATSYP61); (OSM1)"]
["AT2G31070","purple","TCP family protein involved in heterchronic regulation of leaf differentiation. Together with TCP4, TCP3, TCP24 enhances hypocotyl cell elongation by directly activating YUC5.","TCP DOMAIN PROTEIN 10 (tcp10)","TCP DOMAIN PROTEIN 10 (tcp10)"]
["AT5G13820","purple","Encodes a protein that specifically binds plant telomeric DNA repeats. It has a single Myb telomeric DNA-binding (SANT) domain in C-terminus that prefers the sequence TTTAGGG. Single Myb Histone (SMH) gene family member.","TELOMERIC DNA BINDING PROTEIN 1 (TBP1)","TELOMERIC DNA BINDING PROTEIN 1 (TBP1); (ATBP-1);H-PROTEIN PROMOTE (HPPBF-1); (ATTBP1); (ATBP1)"]
["AT3G25820","purple","Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830.","TERPENE SYNTHASE-LIKE SEQUENCE-1,8-CINEOLE (TPS-CIN)","TERPENE SYNTHASE-LIKE SEQUENCE-1,8-CINEOLE (ATTPS-CIN); (TPS23);TERPENE SYNTHASE-LIKE SEQUENCE-1,8-CINEOLE (TPS-CIN)"]
["AT3G25830","purple","Encodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830.","TERPENE SYNTHASE-LIKE SEQUENCE-1,8-CINEOLE (TPS-CIN)","TERPENE SYNTHASE-LIKE SEQUENCE-1,8-CINEOLE (ATTPS-CIN);TERPENE SYNTHASE-LIKE SEQUENCE-1,8-CINEOLE (TPS-CIN); (TPS27)"]
["AT1G62000","purple","Encodes a member of a mucilage protein family. Predicted in silico to be glycosylated.","TESTA ABUNDANT 1 (TBA1)","TESTA ABUNDANT 1 (TBA1)"]
["AT1G62080","purple","Encodes a member of a mucilage protein family. Predicted in silico to be glycosylated.","TESTA ABUNDANT3 (TBA3)","TESTA ABUNDANT3 (TBA3)"]
["AT2G23810","purple","Member of TETRASPANIN family","TETRASPANIN8 (TET8)","TETRASPANIN8 (TET8)"]
["AT5G65160","purple","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","TETRATRICOPEPTIDE REPEAT 14 (TPR14)","TETRATRICOPEPTIDE REPEAT 14 (TPR14)"]
["AT1G75030","purple","encodes a PR5-like protein","THAUMATIN-LIKE PROTEIN 3 (TLP-3)","THAUMATIN-LIKE PROTEIN 3 (ATLP-3);THAUMATIN-LIKE PROTEIN 3 (TLP-3)"]
["AT3G59280","purple","Encodes the ortholog of yeast PAM16, part of the mitochondrial inner membrane protein import motor. Single mutant plants exhibit a smaller size and enhanced resistance against virulent pathogens. They also display elevated reactive oxygen species (ROS) accumulation.","THAXTOMIN A RESISTANT 1 (TXR1)","THAXTOMIN A RESISTANT 1 (TXR1);MUTANT, SNC1-ENHANCING 5 (MUSE5); (ATPAM16); (PAM16); (PAM16-1)"]
["AT5G42980","purple","encodes a cytosolic thioredoxin that reduces disulfide bridges of target proteins by the reversible formation of a disulfide bridge between two neighboring Cys residues present in the active site. Thioredoxins have been found to regulate a variety of biological reactions in prokaryotic and eukaryotic cells. The mRNA is cell-to-cell mobile.","THIOREDOXIN 3 (TRX3)","THIOREDOXIN 3 (ATTRX3);THIOREDOXIN H-TYPE 3 (ATH3);THIOREDOXIN 3 (TRX3);THIOREDOXIN H3 (TRXH3); (ATTRXH3)"]
["AT2G35010","purple","Localized in mitochondria; associated with redox-active functions and effects on plant growth in constant light; joint role with Trx h2 in regulating NADPH redox balance and photosynthetic performance in fluctuating light.","THIOREDOXIN O1 (TO1)","THIOREDOXIN O1 (ATO1);THIOREDOXIN O1 (TO1); (TRXO1)"]
["AT1G72450","purple","JAZ6 transcript levels rise in response to a jasmonate stimulus and a GFP:JAZ6 fusion protein localizes to the nucleus. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ6:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation.","JASMONATE-ZIM-DOMAIN PROTEIN 6 (JAZ6)","TIFY DOMAIN PROTEIN 11B (TIFY11B);JASMONATE-ZIM-DOMAIN PROTEIN 6 (JAZ6)"]
["AT3G24630","purple","hypothetical protein;(source:Araport11)","TON1 RECRUITING MOTIF 34 (TRM34)","TON1 RECRUITING MOTIF 34 (TRM34)"]
["AT3G55000","purple","Encodes a protein of unknown function that is involved in cortical microtubule organization. Mutants exhibit abnormal cell growth and patterns of division. TON1A can functionally complement TON1B and their roles appear to be redundant in plants. Encodes a novel protein that is similar to human FOP and OFD1 centrosomal proteins. Localizes to the preprophase band, cytoplasm and cell cortex where it is probably associated with the cortical cytoskeleton. TON1A associates with plant centrins CEN1 and CEN2.","TONNEAU 1A (TON1A)","TONNEAU 1A (TON1A);TONNEAU 1 (TON1)"]
["AT2G27400","purple","Trans-acting siRNA1a primary transcript (TAS1a). Regulated by miR173.","TRANS-ACTING SIRNA1A (TAS1A)","TRANS-ACTING SIRNA1A (TAS1A)"]
["AT1G50055","purple","Trans-acting siRNA1b primary transcript (TAS1b). Regulated by miR173.","TRANS-ACTING SIRNA1B (TAS1B)","TRANS-ACTING SIRNA1B (TAS1B)"]
["AT2G39681","purple","Trans-acting siRNA primary transcript. RDR6-dependent trans-acting siRNA-generating locus. Regulated by miR173. Produces at least four distinct ta-siRNAs directed against PPR genes.","TRANS-ACTING SIRNA2 (TAS2)","TRANS-ACTING SIRNA2 (TAS2)"]
["AT5G48100","purple","Encodes a protein that is similar to laccase-like polyphenol oxidases. Involved in lignin and flavonoids biosynthesis. It has four conserved copper binding domains. Expressed in developing testa, where it colocalizes with the flavonoid end products proanthocyanidins and flavonols. Mutant plants exhibited a delay in developmentally determined browning of the testa, characterized by the pale brown color of seed coat. The tt10 mutant seeds accumulate more epicatechin monomers and more soluble proanthocyanidins than wild-type seeds. Flavonol composition was also affected in tt10 seeds, which exhibited a higher ratio of quercetin rhamnoside monomers versus dimers than wild-type seeds.","TRANSPARENT TESTA 10 (TT10)","TRANSPARENT TESTA 10 (TT10); (ATTT10); (ATLAC15);LACCASE-LIKE 15 (LAC15)"]
["AT1G70610","purple","member of TAP subfamily","ATP-BINDING CASSETTE B26 (ABCB26)","TRANSPORTER ASSOCIATED WITH ANTIGEN PROCESSING PROTEIN 1 (ATTAP1);TRANSPORTER ASSOCIATED WITH ANTIGEN PROCESSING PROTEIN 1 (TAP1);ATP-BINDING CASSETTE B26 (ABCB26)"]
["AT1G35910","purple","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)","TREHALOSE-6-PHOSPHATE PHOSPHATASE D (TPPD)","TREHALOSE-6-PHOSPHATE PHOSPHATASE D (TPPD); (ATTPPD)"]
["AT3G46590","purple","Encodes a protein that specifically binds plant telomeric DNA (TTTAGGG)n repeats. Involved in bending DNA. Expressed throughout the plant with highest levels in flowers.","TRF-LIKE 1 (TRFL1)","TRF-LIKE 1 (TRFL1); (ATTRP2)"]
["AT4G01080","purple","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. Functions as a mannan O-acetyltransferase, catalyzing the 2-O and 3-O-monoacetylation of mannosyl residues A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","TRICHOME BIREFRINGENCE-LIKE 26 (TBL26)","TRICHOME BIREFRINGENCE-LIKE 26 (TBL26);MANNAN O-ACETYLTRANSFERASE 4 (MOAT4)"]
["AT2G43510","purple","Member of the defensin-like (DEFL) family. Encodes putative trypsin inhibitor protein which may function in defense against herbivory.","TRYPSIN INHIBITOR PROTEIN 1 (TI1)","TRYPSIN INHIBITOR PROTEIN 1 (ATTI1);TRYPSIN INHIBITOR PROTEIN 1 (TI1)"]
["AT2G43520","purple","Encodes putative trypsin inhibitor protein which may function in defense against herbivory. Member of the defensin-like (DEFL) family.","TRYPSIN INHIBITOR PROTEIN 2 (TI2)","TRYPSIN INHIBITOR PROTEIN 2 (ATTI2);TRYPSIN INHIBITOR PROTEIN 2 (TI2)"]
["AT1G43640","purple","Member of TLP family of tubby like proteins that also contain an F-Box.","TUBBY LIKE PROTEIN 5 (TLP5)","TUBBY LIKE PROTEIN 5 (TLP5);TUBBY LIKE PROTEIN 5 (AtTLP5)"]
["AT3G02140","purple","Encodes a protein that acts in the nucleus and is an important negative regulator of ABA and salt stress responses, and could play a critical role in controlling root elongation, floral initiation and starch degradation.","TWO OR MORE ABRES-CONTAINING GENE 2 (TMAC2)","TWO OR MORE ABRES-CONTAINING GENE 2 (TMAC2);ABI FIVE BINDING PROTEIN 4 (AFP4)"]
["AT2G16920","purple","ubiquitin-conjugating enzyme 23;(source:Araport11)","UBIQUITIN-CONJUGATING ENZYME 23 (UBC23)","UBIQUITIN-CONJUGATING ENZYME 23 (UBC23);PHO2 FAMILY UBIQUITIN CONJUGATION ENZYME 2 (PFU2)"]
["AT5G62540","purple","Encodes a protein predicted to be an E2 ubiquitin conjugating enzyme. It appears homologous to the RAD6 protein in yeast implicated in histone ubiquitination, but, UBC3 has not been experimentally associated with this process.","UBIQUITIN-CONJUGATING ENZYME 3 (UBC3)","UBIQUITIN-CONJUGATING ENZYME 3 (UBC3)"]
["AT1G16890","purple","UBC36/UBC13B encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair. It can bind to the MMZ/UEV1 proteins in vitro.","UBIQUITIN-CONJUGATING ENZYME 36 (UBC36)","UBIQUITIN-CONJUGATING ENZYME 36 (UBC36); (ATUBC36)"]
["AT3G20060","purple","Encodes one of two ubiquitin-conjugating enzymes belonging to the E2-C gene family (the other being UBC19). Transcript is always found in dividing cells, but also in other non-dividing cells. Protein is localized to the cytoplasm as well as to the nucleus.","UBIQUITIN-CONJUGATING ENZYME19 (UBC19)","UBIQUITIN-CONJUGATING ENZYME19 (UBC19)"]
["AT5G42300","purple","Ubiquitin like protein that appears to play a role in pre-mRNA splicing.","UBIQUITIN-LIKE PROTEIN 5 (UBL5)","UBIQUITIN-LIKE PROTEIN 5B (UBL5B);UBIQUITIN-LIKE PROTEIN 5 (UBL5)"]
["AT4G39370","purple","Encodes a ubiquitin-specific protease.","UBIQUITIN-SPECIFIC PROTEASE 27 (UBP27)","UBIQUITIN-SPECIFIC PROTEASE 27 (UBP27)"]
["AT1G02000","purple","UDP-D-glucuronate 4-epimerase The mRNA is cell-to-cell mobile.","UDP-D-GLUCURONATE 4-EPIMERASE 2 (GAE2)","UDP-D-GLUCURONATE 4-EPIMERASE 2 (GAE2)"]
["AT4G12250","purple","UDP-D-glucuronate 4-epimerase","UDP-D-GLUCURONATE 4-EPIMERASE 5 (GAE5)","UDP-D-GLUCURONATE 4-EPIMERASE 5 (GAE5)"]
["AT1G24100","purple","Encodes a UDP-glucose:thiohydroximate S-glucosyltransferase, involved in glucosinolate biosynthesis","UDP-GLUCOSYL TRANSFERASE 74B1 (UGT74B1)","UDP-GLUCOSYL TRANSFERASE 74B1 (UGT74B1)"]
["AT5G05870","purple","UDP-glucosyl transferase 76C1;(source:Araport11)","UDP-GLUCOSYL TRANSFERASE 76C1 (UGT76C1)","UDP-GLUCOSYL TRANSFERASE 76C1 (UGT76C1)"]
["AT3G62830","purple","Encodes a Golgi localized isoform of UDP-glucuronic acid decarboxylase. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.","(AUD1)","UDP-GLUCURONIC ACID DECARBOXYLASE 2 (UXS2); (ATUXS2); (AUD1)"]
["AT5G58970","purple","UCP2 and its paralog UCP1 is a member of the PUMP2 family of uncoupling proteins. It functions as a mitochondrial transporter of spartate, glutamate and dicarboxylates.","UNCOUPLING PROTEIN 2 (UCP2)","UNCOUPLING PROTEIN 2 (ATUCP2);PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 2 (PUMP2);UNCOUPLING PROTEIN 2 (UCP2)"]
["AT1G51170","purple","Encodes an active AGC VIII protein kinase that interacts with the putative transcription factor ATS and regulates planar growth during integument development in the ovule. Mutants exhibit ectopic growth in filaments and petals, as well as aberrant embryogenesis.","UNICORN (UCN)","UNICORN (UCN);AGC2 KINASE 3 (AGC2-3)"]
["AT5G43580","purple","Predicted to encode a PR (pathogenesis-related) peptide that belongs to the PR-6 proteinase inhibitor family. Functions in resistance to necrotrophic fungi and insect herbivory. Six putative PR-6-type protein encoding genes are found in Arabidopsis: At2g38900, At2g38870, At5g43570, At5g43580, At3g50020 and At3g46860.","UNUSUAL SERINE PROTEASE INHIBITOR (UPI)","UNUSUAL SERINE PROTEASE INHIBITOR (UPI)"]
["AT2G37460","purple","nodulin MtN21-like transporter family protein","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 12 (UMAMIT12)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 12 (UMAMIT12)"]
["AT2G39510","purple","Encodes a plasma membrane-localized amino acid transporter likely involved in amino acid export in the developing seed.","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 14 (UMAMIT14)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 14 (UMAMIT14)"]
["AT1G44800","purple","Encodes Siliques Are Red 1 (SIAR1). Functions as a bidirectional amino acid transporter that is crucial for the amino acid homeostasis of siliques. Member of nodulin MtN21-like transporter family.","SILIQUES ARE RED 1 (SIAR1)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 18 (UMAMIT18);SILIQUES ARE RED 1 (SIAR1)"]
["AT1G09380","purple","nodulin MtN21-like transporter family protein","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 25 (UMAMIT25)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 25 (UMAMIT25)"]
["AT1G11460","purple","nodulin MtN21-like transporter family protein","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 26 (UMAMIT26)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 26 (UMAMIT26)"]
["AT4G01430","purple","Encodes a plasma membrane-localized amino acid transporter likely involved in amino acid export in the developing seed.","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 29 (UMAMIT29)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 29 (UMAMIT29)"]
["AT3G28100","purple","nodulin MtN21-like transporter family protein The mRNA is cell-to-cell mobile.","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 45 (UMAMIT45)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 45 (UMAMIT45)"]
["AT1G62660","purple","Glycosyl hydrolases family 32 protein;(source:Araport11)","VACUOLAR INVERTASE 1 (VI1)","VACUOLAR INVERTASE 1 (VI1)"]
["AT2G05170","purple","Homologous to yeast VPS11. Forms a complex with VCL1 and AtVPS33. Involved in vacuolar biogenesis. The mRNA is cell-to-cell mobile.","VACUOLAR PROTEIN SORTING 11 (VPS11)","VACUOLAR PROTEIN SORTING 11 (ATVPS11);VACUOLAR PROTEIN SORTING 11 (VPS11)"]
["AT5G60140","purple","REM-AP2/B3-like transcriptional factor family protein. Functions downstream of STK/SEP3 and with VDD in fertilization to regulate synergid cell death.","(REM11)","VALKYRIE (VAL); (REM11)"]
["AT2G32670","purple","member of Synaptobrevin -like protein family; TGN/PM localized.","VESICLE-ASSOCIATED MEMBRANE PROTEIN 725 (VAMP725)","VESICLE-ASSOCIATED MEMBRANE PROTEIN 725 (ATVAMP725);VESICLE-ASSOCIATED MEMBRANE PROTEIN 725 (VAMP725)"]
["AT1G14000","purple","Encodes a protein with similarity to members of the C1 subgroup of MAP kinase kinase kinases. Interacts physically with the receptor kinase BRL2/VH1 and appears to be involved in auxin and brassinosteriod signaling. The mRNA is cell-to-cell mobile.","VH1-INTERACTING KINASE (VIK)","VH1-INTERACTING KINASE (VIK); (ILK6)"]
["AT4G32770","purple","Tocopherol cyclase involved in tocopherol (vitamin E)synthesis. VTE1 over-expressing plants have increased tocopherol indicating VTE1 is a major limiting factor in tocopherol synthesis. Mutants defective in this gene accumulate high amounts of zeaxanthin in conditions of high light or low temperature. Plays a role in the adaptation to low temperature stress, notably phloem loading.","VITAMIN E DEFICIENT 1 (VTE1)","VITAMIN E DEFICIENT 1 (VTE1);SUCROSE EXPORT DEFECTIVE 1 (ATSDX1)"]
["AT4G21550","purple","VP1/ABI3-like 3;(source:Araport11)","VP1/ABI3-LIKE 3 (VAL3)","VP1/ABI3-LIKE 3 (VAL3)"]
["AT4G13870","purple","Encodes a protein with homology to the exonuclease domain of hWRN-p of human protein Werner Syndrome Exonuclease (WEX). Forms a complex with the heterodimeric factor Ku. The interaction with KU stimulates WEX exonuclease activity.","WERNER SYNDROME-LIKE EXONUCLEASE (WRNEXO)","WERNER SYNDROME-LIKE EXONUCLEASE (WRNEXO)"]
["AT1G47200","purple","WPP family members contains an NE targeting domain. This domain, called the WPP domain after a highly conserved Trp-Pro-Pro motif, is necessary for NE targeting of WPP1. RNAi suppression of WPP2 resulted in reduced mitotic activity.","WPP DOMAIN PROTEIN 2 (WPP2)","WPP DOMAIN PROTEIN 2 (WPP2)"]
["AT5G49520","purple","Encodes WRKY48, a member of the WRKY Transcription Factor. WRKY48 is a stress- and pathogen-induced transcriptional activator that represses plant basal defense. The mRNA is cell-to-cell mobile.","WRKY DNA-BINDING PROTEIN 48 (WRKY48)","WRKY DNA-BINDING PROTEIN 48 (WRKY48);ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 48 (ATWRKY48)"]
["AT5G57740","purple","Encodes a RING-type E3 ligase XBAT32. Mediates the proteasomal degradation of the ethylene biosynthetic enzyme, 1-aminocyclopropane-1-carboxylate synthase 7.","XB3 ORTHOLOG 2 IN ARABIDOPSIS THALIANA (XBAT32)","XB3 ORTHOLOG 2 IN ARABIDOPSIS THALIANA (XBAT32)"]
["AT5G33290","purple","Acts as a xylogalacturonan xylosyltransferase within the XGA biosynthesis pathway. Involved in pectin biosynthesis.","XYLOGALACTURONAN DEFICIENT 1 (XGD1)","XYLOGALACTURONAN DEFICIENT 1 (XGD1)"]
["AT5G64080","purple","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)","XYLOGEN PROTEIN 1 (XYP1)","XYLOGEN PROTEIN 1 (XYP1);GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 31 (LTPG31); (AtXYP1)"]
["AT2G01850","purple","EXGT-A3 has homology to xyloglucan endotransglucosylases/hydrolases (XTHs). Mutants in this gene show a lesion mimic phenotype associated with leaf maturation and a reduction in the number of tertiary veins. Individual tracheary elements in the mutants are shorter, but phloem transport activity is not severely affected. EXGT-A3 plays a role in xyloglucan degradation in the differentiating tracheary elements of rosette leaves. The mRNA is cell-to-cell mobile.","ENDOXYLOGLUCAN TRANSFERASE A3 (EXGT-A3)","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 27 (XTH27); (ATXTH27);ENDOXYLOGLUCAN TRANSFERASE A3 (EXGT-A3)"]
["AT1G14720","purple","member of Glycoside Hydrolase Family 16","XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 28 (XTH28)","XYLOGLUCAN ENDOTRANSGLYCOSYLASE RELATED 2 (XTR2);ENDOXYLOGLUCAN TRANSFERASE A2 (EXGT-A2); (ATXTH28);XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 28 (XTH28)"]
["AT3G51430","purple","Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.","YELLOW-LEAF-SPECIFIC GENE 2 (YLS2)","YELLOW-LEAF-SPECIFIC GENE 2 (YLS2);STRICTOSIDINE SYNTHASE-LIKE 5 (SSL5)"]
["AT4G06634","purple","Encodes an ABA responsive C2H2-type zinc finger transcription factor with both transcriptional repression and activation domains, that binds a G-rich, 11-bp DNA-binding motif. YY1 binds to the promoter of ABR1 and disruption represses ABA- and salt-induced ABR1 expression.","YIN YANG 1 (YY1)","YIN YANG 1 (YY1); (ATYY1)"]
["AT3G13740","red","Encodes one of two chloroplast Mini-RNase III-like enzymes in Arabidopsis. Double mutants display imprecise maturation of 23S rRNA and other rRNAs."]
["AT1G71730","red","hypothetical protein;(source:Araport11)"]
["AT5G48240","red","Rrp15p protein;(source:Araport11)"]
["AT4G12340","red","copper ion binding protein;(source:Araport11)"]
["AT5G08400","red","structural maintenance of chromosomes-like protein, putative (DUF3531);(source:Araport11)"]
["AT1G12320","red","ankyrin repeat/KH domain protein (DUF1442);(source:Araport11)"]
["AT1G75670","red","DNA-directed RNA polymerase;(source:Araport11)"]
["AT5G37590","red","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G34310","red","hypothetical protein;(source:Araport11)"]
["AT1G30880","red","hypothetical protein;(source:Araport11)"]
["AT1G73885","red","AT-rich interactive domain protein;(source:Araport11)"]
["AT4G01670","red","hypothetical protein;(source:Araport11)"]
["AT4G18440","red","L-Aspartase-like family protein;(source:Araport11)"]
["AT5G01750","red","LURP-one-like protein (DUF567);(source:Araport11)"]
["AT3G19250","red","transmembrane protein, putative (DUF677);(source:Araport11)"]
["AT2G40920","red","F-box and associated interaction domains-containing protein;(source:Araport11)"]
["AT3G60300","red","RWD domain-containing protein;(source:Araport11)"]
["AT1G77122","red","Uncharacterized protein family UPF0090;(source:Araport11)"]
["AT5G46460","red","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G01160","red","pre-rRNA-processing ESF1-like protein;(source:Araport11)"]
["AT1G69070","red","nucleolar-like protein;(source:Araport11)"]
["AT4G20980","red","Eukaryotic translation initiation factor 3 subunit 7 (eIF-3);(source:Araport11)"]
["AT1G50000","red","methyltransferase;(source:Araport11)"]
["AT4G27660","red","hypothetical protein;(source:Araport11)"]
["AT1G78780","red","pathogenesis-related family protein;(source:Araport11)"]
["AT1G12020","red","hypothetical protein;(source:Araport11)"]
["AT5G49110","red","fanconi anemia group I-like protein;(source:Araport11)"]
["AT5G08420","red","RNA-binding KH domain-containing protein;(source:Araport11)"]
["AT5G47510","red","Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11)"]
["AT5G05520","red","Outer membrane OMP85 family protein;(source:Araport11)"]
["AT2G31740","red","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT5G20160","red","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11)"]
["AT5G28919","red","hypothetical protein;(source:Araport11)"]
["AT3G55080","red","SET domain-containing protein;(source:Araport11)"]
["AT5G64420","red","DNA polymerase V family;(source:Araport11)"]
["AT4G28200","red","U3 small nucleolar RNA-associated-like protein;(source:Araport11)"]
["AT1G77230","red","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G54740","red","zein-binding protein (Protein of unknown function, DUF593);(source:Araport11)"]
["AT5G58110","red","chaperone binding / ATPase activator;(source:Araport11)"]
["AT3G45770","red","Encodes a mitochondrial enoyl-ACP reductase, a component of the fatty acid synthase complex."]
["AT1G45230","red","DCL protein (DUF3223);(source:Araport11)"]
["AT3G13150","red","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G67570","red","zinc finger CONSTANS-like protein (DUF3537);(source:Araport11)"]
["AT1G34160","red","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G40520","red","DNA double-strand break repair protein;(source:Araport11)"]
["AT5G14050","red","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT5G19960","red","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT5G09450","red","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G15010","red","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G10000","red","Ribonuclease H-like superfamily protein;(source:Araport11)"]
["AT3G55690","red","hypothetical protein;(source:Araport11)"]
["AT3G03920","red","H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein;(source:Araport11)"]
["AT4G38540","red","FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11)"]
["AT2G43540","red","transmembrane protein;(source:Araport11)"]
["AT4G02220","red","zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein;(source:Araport11)"]
["AT5G43720","red","rRNA-processing EFG1-like protein (DUF2361);(source:Araport11)"]
["AT4G15810","red","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT1G03650","red","Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11)"]
["AT1G09900","red","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)"]
["AT1G29320","red","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT5G06400","red","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G20130","red","sulfate adenylyltransferase subunit;(source:Araport11)"]
["AT4G04190","red","transmembrane protein;(source:Araport11)"]
["AT3G26540","red","RGFR3 is a leucine--rich repeat receptor kinase that, together with RGFR1 and RGFR2, binds ROOT GROWTH FACTORS and is required for establishing the gradient of PLETHORA1 and PLETHORA2 essential for proper root growth and development."]
["AT3G57360","red","tRNA-splicing endonuclease subunit;(source:Araport11)"]
["AT3G02420","red","dihydroflavonol 4-reductase/flavanone protein;(source:Araport11)"]
["AT1G06440","red","Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11)"]
["AT5G13470","red","hypothetical protein;(source:Araport11)"]
["AT3G57000","red","nucleolar essential protein-like protein;(source:Araport11)"]
["AT1G08125","red","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT2G46250","red","myosin heavy chain-like protein;(source:Araport11)"]
["AT1G45110","red","Tetrapyrrole (Corrin/Porphyrin) Methylase;(source:Araport11)"]
["AT4G31790","red","AT4G31790.1 structure is probably incorrect. Annotated CDS doesn't translate into a single open reading frame."]
["AT1G62730","red","Terpenoid synthases superfamily protein;(source:Araport11)"]
["AT5G13360","red","Auxin-responsive GH3 family protein;(source:Araport11)"]
["AT5G49560","red","Putative methyltransferase family protein;(source:Araport11)"]
["AT3G56680","red","Single-stranded nucleic acid binding R3H protein;(source:Araport11)"]
["AT1G49980","red","DNA/RNA polymerases superfamily protein;(source:Araport11)"]
["AT2G20390","red","cytochrome oxidase complex assembly protein;(source:Araport11)"]
["AT4G09830","red","nuclear receptor family 2 group C protein;(source:Araport11)"]
["AT5G35560","red","DENN (AEX-3) domain-containing protein;(source:Araport11)"]
["AT1G12650","red","rRNA biogenesis RRP36-like protein;(source:Araport11)"]
["AT1G53200","red","TAF RNA polymerase I subunit A;(source:Araport11)"]
["AT1G73230","red","Nascent polypeptide-associated complex NAC;(source:Araport11)"]
["AT1G23280","red","MAK16 protein-like protein;(source:Araport11)"]
["AT5G27120","red","SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; has similarity to MAR binding NOP58 protein The mRNA is cell-to-cell mobile."]
["AT5G50310","red","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT4G31210","red","DNA topoisomerase, type IA, core;(source:Araport11)"]
["AT3G24000","red","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G18790","red","pre-mRNA-splicing factor ISY1-like protein;(source:Araport11)"]
["AT5G54910","red","DEA(D/H)-box RNA helicase family protein;(source:Araport11)"]
["AT1G77550","red","tubulin-tyrosine ligase;(source:Araport11)"]
["AT1G58150","red","phosphoglycerate kinase;(source:Araport11)"]
["AT4G16630","red","DEA(D/H)-box RNA helicase family protein;(source:Araport11)"]
["AT3G08820","red","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G53330","red","encodes a member of the pentatricopeptide repeat (PPR) gene family. T-DNA insertion mutants had a complex phenotypic expression, ranging from embryo lethal to seedling lethal, to just subtle changes."]
["AT3G11964","red","Encodes a nucleolar protein that is a ribosome biogenesis co-factor. Mutants display aberrant RNA processing and female gametophyte development."]
["AT3G62650","red","hypothetical protein;(source:Araport11)"]
["AT1G69210","red","Uncharacterized protein family UPF0090;(source:Araport11)"]
["AT3G07310","red","phosphoserine aminotransferase, putative (DUF760);(source:Araport11)"]
["AT1G45332","red","Translation elongation factor EFG/EF2 protein;(source:Araport11)"]
["AT3G18020","red","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G06200","red","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT5G58920","red","homeobox prospero protein;(source:Araport11)"]
["AT4G34881","red","transmembrane protein;(source:Araport11)"]
["AT1G15870","red","Mitochondrial glycoprotein family protein;(source:Araport11)"]
["AT5G42250","red","Zinc-binding alcohol dehydrogenase family protein;(source:Araport11)"]
["AT1G79470","red","Aldolase-type TIM barrel family protein;(source:Araport11)"]
["AT1G75125","red","plastid transcriptionally active protein;(source:Araport11)"]
["AT4G32605","red","Mitochondrial glycoprotein family protein;(source:Araport11)"]
["AT3G04890","red","adenine phosphoribosyltransferase-like protein, putative (DUF2358);(source:Araport11)"]
["AT2G41200","red","transmembrane protein;(source:Araport11)"]
["AT2G35820","red","ureidoglycolate hydrolase;(source:Araport11)"]
["AT4G21110","red","G10 family protein;(source:Araport11)"]
["AT1G48570","red","zinc finger (Ran-binding) family protein;(source:Araport11)"]
["AT4G14820","red","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G02220","red","small acidic-like protein;(source:Araport11)"]
["AT1G67480","red","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT1G18900","red","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G30000","red","PHF5-like protein;(source:Araport11)"]
["AT2G37690","red","phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase;(source:Araport11)"]
["AT2G02060","red","Homeodomain-like superfamily protein;(source:Araport11)"]
["AT2G20725","red","CAAX amino terminal protease family protein;(source:Araport11)"]
["AT1G42440","red","pre-rRNA-processing TSR1-like protein;(source:Araport11)"]
["AT5G16220","red","Octicosapeptide/Phox/Bem1p family protein;(source:Araport11)"]
["AT2G36770","red","UDP-Glycosyltransferase superfamily protein;(source:Araport11)"]
["AT3G14730","red","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G46230","red","PIN domain-like family protein;(source:Araport11)"]
["AT4G39420","red","spatacsin carboxy-terminus protein;(source:Araport11)"]
["AT3G06980","red","DEA(D/H)-box RNA helicase family protein;(source:Araport11)"]
["AT4G21705","red","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G44510","red","CDK inhibitor P21 binding protein;(source:Araport11)"]
["AT1G10580","red","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT1G71460","red","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)"]
["AT5G61950","red","Ubiquitin carboxyl-terminal hydrolase-related protein;(source:Araport11)"]
["AT2G31410","red","coiled-coil protein;(source:Araport11)"]
["AT1G48460","red","tRNA-processing ribonuclease BN;(source:Araport11)"]
["AT1G63770","red","Peptidase M1 family protein;(source:Araport11)"]
["AT3G21020","red","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 5.4e-14 P-value blast match to gb|AAO73529.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family);(source:TAIR10)"]
["AT1G51310","red","tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase;(source:Araport11)"]
["AT4G25170","red","Uncharacterized conserved protein (UCP012943);(source:Araport11)"]
["AT2G47250","red","RNA helicase family protein;(source:Araport11)"]
["AT2G18900","red","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT3G06530","red","ARM repeat superfamily protein;(source:Araport11)"]
["AT4G12750","red","Homeodomain-like transcriptional regulator;(source:Araport11)"]
["AT1G74545","red","Potential natural antisense gene, locus overlaps with AT1G74540"]
["AT5G14440","red","Surfeit locus protein 2 (SURF2);(source:Araport11)"]
["AT1G74240","red","Mitochondrial substrate carrier family protein;(source:Araport11)"]
["AT1G06720","red","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT1G33110","red","MATE efflux family protein;(source:Araport11)"]
["AT5G49840","red","ATP-dependent Clp protease;(source:Araport11)"]
["AT2G34360","red","MATE efflux family protein;(source:Araport11)"]
["AT3G50910","red","netrin receptor DCC;(source:Araport11)"]
["AT3G51270","red","protein serine/threonine kinase;(source:Araport11)"]
["AT3G26782","red","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT4G02400","red","U3 ribonucleoprotein (Utp) family protein;(source:Araport11)"]
["AT5G04780","red","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G29776","red","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 1.3e-178 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea);(source:TAIR10)"]
["AT1G01920","red","SET domain-containing protein;(source:Araport11)"]
["AT3G02770","red","Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase;(source:Araport11)"]
["AT4G39470","red","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G24990","red","Serine/threonine-protein kinase Rio1;(source:Araport11)"]
["AT1G13410","red","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT4G02930","red","GTP binding Elongation factor Tu family protein;(source:Araport11)"]
["AT3G05060","red","SAR DNA-binding protein, putative, strong similarity to SAR DNA-binding protein-1 (Pisum sativum) GI:3132696; contains Pfam profile PF01798: Putative snoRNA binding domain; encodes NOP58-like protein"]
["AT4G26810","red","SWIB/MDM2 domain superfamily protein;(source:Araport11)"]
["AT1G27470","red","transducin family protein / WD-40 repeat family protein;(source:Araport11)"]
["AT3G21540","red","transducin family protein / WD-40 repeat family protein;(source:Araport11)"]
["AT5G08540","red","Membrane protein"]
["AT4G27380","red","hypothetical protein;(source:Araport11)"]
["AT1G73240","red","nucleoporin protein Ndc1-Nup protein;(source:Araport11)"]
["AT5G63010","red","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT5G04250","red","Cysteine proteinases superfamily protein;(source:Araport11)"]
["AT1G13040","red","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)"]
["AT4G25880","red","Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 Prime UTR of target mRNA transcripts."]
["AT4G24820","red","26S proteasome regulatory subunit Rpn7;(source:Araport11)"]
["AT5G57370","red","U4/U6.U5 small nuclear ribonucleoprotein;(source:Araport11)"]
["AT4G19960","red","Encodes a potassium ion transmembrane transporter. Also mediates cesium uptake when expressed in E. coli.The mRNA is cell-to-cell mobile. Maintains root meristem activity by regulating K+ and auxin homeostasis in response to low K."]
["AT4G12600","red","Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11)"]
["AT4G15955","red","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT3G09430","red","peptide transporter family protein;(source:Araport11)"]
["AT2G19385","red","zinc ion binding protein;(source:Araport11)"]
["AT2G27830","red","hypothetical protein;(source:Araport11)"]
["AT3G24518","red","Natural antisense transcript overlaps with AT3G24520;(source:Araport11)"]
["AT3G14690","red","putative cytochrome P450The mRNA is cell-to-cell mobile."]
["AT4G34910","red","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT3G46210","red","Ribosomal protein S5 domain 2-like superfamily protein;(source:Araport11)"]
["AT2G03260","red","EXS (ERD1/XPR1/SYG1) family protein;(source:Araport11)"]
["AT3G09760","red","RING/U-box superfamily protein;(source:Araport11)"]
["AT5G42850","red","Thioredoxin superfamily protein;(source:Araport11)"]
["AT5G53850","red","Encodes a trifunctional dehydratase / enolase / phosphatase involved in the methionine salvage."]
["AT5G12410","red","THUMP domain-containing protein;(source:Araport11)"]
["AT4G26370","red","antitermination NusB domain-containing protein;(source:Araport11)"]
["AT2G32600","red","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT1G03340","red","hypothetical protein;(source:Araport11)"]
["AT5G06570","red","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT2G17033","red","pentatricopeptide (PPR) repeat-containing protein;(source:Araport11)"]
["AT2G45030","red","Translation elongation factor EFG/EF2 protein;(source:Araport11)"]
["AT3G14060","red","hypothetical protein;(source:Araport11)"]
["AT2G40720","red","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G56550","red","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G61360","red","S-locus lectin protein kinase family protein;(source:Araport11)"]
["AT1G33790","red","jacalin lectin family protein;(source:Araport11)"]
["AT3G06690","red","putative acyl-coenzyme A oxidase;(source:Araport11)"]
["AT5G45620","red","Proteasome component (PCI) domain protein;(source:Araport11)"]
["AT1G51380","red","DEA(D/H)-box RNA helicase family protein;(source:Araport11)"]
["AT5G64160","red","plant/protein;(source:Araport11)"]
["AT4G18840","red","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)"]
["AT1G62510","red","Expressed in the root cortex."]
["AT3G23910","red","reverse transcriptase-like protein;(source:Araport11)"]
["AT5G35570","red","O-fucosyltransferase family protein;(source:Araport11)"]
["AT2G41080","red","pentatricopeptide (PPR) repeat protein;(source:Araport11)"]
["AT1G54310","red","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT5G16040","red","Regulator of chromosome condensation (RCC1) family protein;(source:Araport11)"]
["AT4G10650","red","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT1G75200","red","flavodoxin family protein / radical SAM domain-containing protein;(source:Araport11)"]
["AT1G20100","red","DNA ligase-like protein;(source:Araport11)"]
["AT5G66500","red","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G77320","red","Mutant is defective in meiosis and produces abnormal microspores. Encodes a BRCT-domain-containing protein that could be specific to the meiotic cell cycle and that plays a crucial role in some DNA repair events independent of SPO11 DSB recombination repair."]
["AT5G57120","red","nucleolar/coiled-body phosphoprotein;(source:Araport11)"]
["AT2G19120","red","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT2G42650","red","Ribosomal protein L1p/L10e family;(source:Araport11)"]
["AT5G06360","red","Ribosomal protein S8e family protein;(source:Araport11)"]
["AT3G58660","red","Ribosomal protein L1p/L10e family;(source:Araport11)"]
["AT5G57280","red","Gene encodes a methyltransferase-like protein involved in pre-rRNA processing.","ROOT INITIATION DEFECTIVE 2 (RID2)"]
["AT1G23180","red","armadillo repeat protein (ARM); interacts with chloroplast chaperone CLPC1, which unfolds and delivers substrates to the stromal CLPPRT protease complex for degradation.","(ARM)","(ARM)"]
["AT5G57890","red","Encodes together with ASB1, At1g25220 and At5g57890 anthranilate synthase &#946; subunit which constitutes a heterotetramer complex with ASA.","(ASB2)","(ASB2)"]
["AT3G08010","red","Encodes a chloroplast-localized protein ATAB2. ATAB2 is involved in the biogenesis of Photosystem I and II. ATAB2 has A/U-rich RNA-binding activity and presumably functions as an activator of translation with targets at PS I and PS II.","(ATAB2)","(ATAB2)"]
["AT5G65110","red","Encodes an acyl-CoA oxidase presumably involved in long chain fatty acid biosynthesis.","ACYL-COA OXIDASE 2 (ACX2)","(ATACX2);ACYL-COA OXIDASE 2 (ACX2)"]
["AT1G76010","red","Together with other ALBA proteins phase separates into stress granules and processing bodies under heat stress and directly binds to and recruits mRNAs to protect from degradation. Confers thermotolerance through stabilizing HSF messenger RNAs in cytoplasmic granules.","(ALBA1)","(ATALBA1); (ALBA5); (ALBA4); (ALBA1)"]
["AT2G20280","red","Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11)","(ATC3H21)","(ATC3H21)"]
["AT4G38890","red","FMN-linked oxidoreductases superfamily protein;(source:Araport11)","(ATC3H50)","(ATC3H50)"]
["AT1G55850","red","encodes a protein similar to cellulose synthase The mRNA is cell-to-cell mobile.","CELLULOSE SYNTHASE LIKE E1 (CSLE1)","(ATCSLE1);CELLULOSE SYNTHASE LIKE E1 (CSLE1)"]
["AT5G22650","red","Encodes a member of a plant-specific class of histone deacetylases. Controls the development of adaxial/abaxial leaf polarity. Its mRNA is widely expressed in stems, leaves, flowers and young siliques. Plant lines expressing RNAi constructs directed against this gene showed a marked reduction in agrobacterium-mediated root transformation.","HISTONE DEACETYLASE 2B (HD2B)","(ATHD2B); (HDT2); (HDT02);HISTONE DEACETYLASE 2B (HD2B);ARABIDOPSIS HISTONE DEACETYLASE 2 (ATHD2);HISTONE DEACETYLASE 2 (HD2); (HDA4)"]
["AT1G09300","red","Encodes a mitochondrial protease ICP55. Alters the stability of proteins by removal of a single amino acid from their sequence.","(ATICP55)","(ATICP55)"]
["AT5G27600","red","Encode peroxisomal long-chain acyl-CoA synthetase. Activates fatty acids for further metabolism. Interacts with PEX5.","LONG-CHAIN ACYL-COA SYNTHETASE 7 (LACS7)","(ATLACS7);LONG-CHAIN ACYL-COA SYNTHETASE 7 (LACS7)"]
["AT4G29540","red","Encodes a UDP-N-acetylglucosamine acyltransferase.","(LPXA)","(ATLPXA); (LPXA)"]
["AT4G29170","red","A homolog of yeast, mouse and human mnd1delta protein. Null mutants exhibit normal vegetative and flower development; however, during prophase I, chromosomes become fragmented resulting in random distribution of the fragments between polyads. Both male and female meiosis are defective and strong accumulation of AtRAD51 was observed in the inflorescence nuclei of mutant plants. Similarly to its yeast and animal homologues, AtMnd1 might play a role in DSB repair during meiosis.","(ATMND1)","(ATMND1)"]
["AT1G03530","red","nuclear assembly factor 1;(source:Araport11)","NUCLEAR ASSEMBLY FACTOR 1 (NAF1)","(ATNAF1);NUCLEAR ASSEMBLY FACTOR 1 (NAF1)"]
["AT5G52820","red","Encodes a NOTCHLESS homolog, a non-ribosomal protein involved in the maturation and assembly of the 60S ribosomal subunit, that is required for female gametogenesis. The mRNA is cell-to-cell mobile.","NOTCHLESS (NLE)","(ATNLE);NOTCHLESS (NLE)"]
["AT2G03820","red","Encodes a protein involved in the nuclear export of the 60S ribosomal subunit and formation of the secondary cell wall.","NONSENSE-MEDIATED MRNA DECAY 3 (NMD3)","(ATNMD3);NONSENSE-MEDIATED MRNA DECAY 3 (NMD3)"]
["AT5G27520","red","encodes a peroxisomal adenine nucleotide transporter, involved in fatty acid beta-oxidation during early stage of postgerminative growth.","PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 2 (PNC2)","(ATPNC2);PEROXISOMAL ADENINE NUCLEOTIDE CARRIER 2 (PNC2)"]
["AT3G55010","red","encoding phosphoribosylformylglycinamidine cyclo-ligase (syn. AIR synthetase)that phosphorylates 5-phosphoribosyl-N-formylglycinamidine (FGAM) to form 5-aminoimidazole ribonucleotide (AIR)","(PUR5)","(ATPURM); (PUR5);EMBRYO DEFECTIVE 2818 (EMB2818)"]
["AT4G16830","red","Encodes a perinuclear and cytoplasmically localized mRNA binding protein. AtRGGA is likely involved in stress responsivness. It is induced by salt and osmotic stress and loss of function mutations are more sensitive to stress. The mRNA is cell-to-cell mobile.","(ATRGGA)","(ATRGGA)"]
["AT5G17490","red","Encodes a DELLA subfamily member that acts as a negative regulator of GA signaling and as a coactivator of ABI3 to promote seed storage protein biosynthesis during the seed maturation stage.","RGA-LIKE PROTEIN 3 (RGL3)","(AtRGL3);RGA-LIKE PROTEIN 3 (RGL3)"]
["AT5G62190","red","Encodes a ATP-dependent RNA unwinding protein targeted to the nucleolus and presumably involved in translation by assisting ribosome maturation. DEAD/DEAH box RNA helicase PRH75","PLANT RNA HELICASE75 (PRH75)","(ATRH7);PLANT RNA HELICASE75 (PRH75)"]
["AT1G78510","red","Encodes one of the two paralogous solanesyl diphosphate synthases - SPS1 (At1g78510) and SPS2 (At1g17050) - that assemble the side-chain of plastoquinone-9 in plastids.","SOLANESYL DIPHOSPHATE SYNTHASE 1 (SPS1)","(ATSPS1);SOLANESYL DIPHOSPHATE SYNTHASE 1 (SPS1)"]
["AT5G22330","red","Encodes a plant orthologue of Pontin that associates with the catalytic subunit of telomerase (AtTERT) in the nucleolus and is involved in telomerase assembly.","RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1 (RIN1)","(ATTIP49A);RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1 (RIN1);RUVB-LIKE 1 (RUVBL1); (ATRUVBL1);PONTIN (RVB1)"]
["AT5G47680","red","Encodes a protein involved in modification of nucleosides in tRNA. Mutants have 50% less 1-methylguanosine than wt counterparts.","TRNA MODIFICATION 10 (TRM10)","(AtTRM10);TRNA MODIFICATION 10 (TRM10)"]
["AT4G27340","red","Met-10+ like family protein;(source:Araport11)","TRNA METHYLTRANSFERASE 5B (TRM5B)","(ATTRM5B);TRNA METHYLTRANSFERASE 5B (TRM5B)"]
["AT2G45730","red","Part of complex with TRM61, plays a critical role in maintaining the stability of initiator methionyl-tRNA, embryo and endosperm development. In the complex TRM61 functions as the catalytic subunit, and TRM6 performs the role of the binding subunit.","TRNA METHYLTRANSFERASE 6 (TRM6)","(ATTRM6);TRNA METHYLTRANSFERASE 6 (TRM6)"]
["AT4G01037","red","Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11)","WHAT IS THIS FACTOR 1 (WTF1)","(AtWTF1);WHAT IS THIS FACTOR 1 (WTF1)"]
["AT1G02150","red","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","(CCR16)","(CCR16)"]
["AT4G31810","red","ATP-dependent caseinolytic (Clp) protease/crotonase family protein;(source:Araport11)","(CHY4)","(CHY4);RIBOSOMAL PROTEIN MS47 (MS47)"]
["AT2G04030","red","Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response and crucial for protein import into the chloroplast stroma. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR.","(CR88)","(CR88);EMBRYO DEFECTIVE 1956 (emb1956);HEAT SHOCK PROTEIN 90.5 (HSP90.5);HEAT SHOCK PROTEIN 88.1 (Hsp88.1);HEAT SHOCK PROTEIN 90.5 (AtHsp90.5); (ATHSP90C); (HSP90C)"]
["AT2G41750","red","Involved in posttranscriptional modification of tRNA. Can form acp3U20b on a tRNA expressed in yeast cells. The aspartate and tryptophan residues in the DXTW motif of this protein are required for modification activity. Required for the acp3U20a modification of cytosolic tRNA.","(DTWD2A)","(DTWD2A)"]
["AT3G19810","red","BTB/POZ domain protein, putative (DUF177);(source:Araport11)","DOMAIN OF UNKNOWN FUNCTION 177 A (DUF177A)","(DUF177);DOMAIN OF UNKNOWN FUNCTION 177 A (DUF177A)"]
["AT3G15590","red","DWEORG1 encodes a mitochondrial ribosomal PPR protein.","(DWEORG1)","(DWEORG1)"]
["AT5G53400","red","Encodes BOBBER1 (BOB1), a non-canonical small heat shock protein required for both development and thermotolerance. BOB1 is cytoplasmic at basal temperatures but forms heat shock granules containing canonical small heat shock proteins at high temperatures. The mRNA is cell-to-cell mobile.","BOBBER1 (BOB1)","(EAL);BOBBER1 (BOB1)"]
["AT3G22660","red","rRNA processing protein-like protein;(source:Araport11)","(EBP2)","(EBP2)"]
["AT2G24500","red","Encodes a C2H2 zinc finger protein FZF. Involved in cold regulated rRNA processing and the accumulation of CBF protein. Cytosolic ribosomal 60S-biogenesis factor.","(FZF)","(FZF);REI1-LIKE 2 (REIL2);SENSITIVE TO CHILLING 4 (STCH4)"]
["AT5G63290","red","CPO3 (At5g63290) has not been characterized per se, but is a homolog of the CPDH/HEMN (see review by Layer et al, 2010). The homolog from cyanobacteria was recently characterized to be a CPDH (see Goto et al, 2010), but not yet from plants.","(ATHEMN1)","(HEMN1); (ATHEMN1)"]
["AT1G56130","red","Component of a recognition mechanism for both cellulose and MLG-derived oligosaccharides perception and downstream Pattern-Triggered Immunity (PTI).","IMPAIRED IN GLYCAN PERCEPTION 2 (IGP2)","(IGP3);IMPAIRED IN GLYCAN PERCEPTION 2 (IGP2)"]
["AT5G48220","red","Part of the the plastidial synthesis of trp from chorismate via the chorismic acid pathway. Converts 1-(o-carboxyphenylamino)-1-deoxy-ribulose 5-phosphate into indole-3-glycerol phosphate by indole-3-glycerol phosphate synthase.","(IGPS)","(IGPS)"]
["AT1G63780","red","Small nucleolar ribonucleoprotein protein involved in ribosomal RNA processing. Located in nucleolus and cajal bodies.","(IMP4)","(IMP4)"]
["AT4G16143","red","Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.","IMPORTIN ALPHA ISOFORM 2 (IMPA-2)","(IMPA2);IMPORTIN ALPHA ISOFORM 2 (IMPA-2)"]
["AT3G45780","red","Blue-light photoreceptor. Contains a light activated serine-threonine kinase domain and LOV1 and LOV2 repeats. Mutants are defective in blue-light response. Mediates blue light-induced growth enhancements. PHOT1 and PHOT2 mediate blue light-dependent activation of the plasma membrane H+-ATPase in guard cell protoplasts. PHOT1 undergoes blue-light-dependent autophosphorylation. At least eight phosphorylation sites have been identified in PHOT1. Phosphorylation of serine851 in the activation loop of PHOT1 appears to be required for stomatal opening, chloroplast accumulation, leaf flattening, and phototropism, and phosphorylation of serine849 may also contribute to the regulation of these responses. Phosphorylation-dependent binding of 14-3-3 proteins to the Hinge1 region of PHOT1 appears to require serine350 and serine376.","PHOTOTROPIN 1 (PHOT1)","(JK224);NONPHOTOTROPIC HYPOCOTYL 1 (NPH1);PHOTOTROPIN 1 (PHOT1);ROOT PHOTOTROPISM 1 (RPT1)"]
["AT5G61220","red","LYR family of Fe/S cluster biogenesis protein;(source:Araport11)","(ISD11)","(LYRM4); (ISD11)"]
["AT5G67080","red","member of MEKK subfamily","MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 19 (MAPKKK19)","(MKK19);MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 19 (MAPKKK19)"]
["AT5G07900","red","Mitochondrial transcription termination factor family protein;(source:Araport11)","(MTERF7)","(MTERF7)"]
["AT5G26180","red","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)","(NSUN5)","(NSUN5); (ATTRM4H);TRNA METHYLTRANSFERASE 4H (TRM4H)"]
["AT4G30840","red","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)","(NUP43)","(NUP43)"]
["AT1G07615","red","GTP-binding protein Obg/CgtA;(source:Araport11)","(OBG A-1)","(OBG A-1)"]
["AT5G54580","red","Encodes an RNA recognition motif (RRM) and is involved in C-> U RNA editing in mitochondria.","(ORRM2)","(ORRM2)"]
["AT3G61530","red","Encodes a ketopentoate hydroxymethyltransferase that appears to localize to the mitochondria. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis.","(PANB2)","(PANB2)"]
["AT5G01410","red","Encodes a protein predicted to function in tandem with PDX2 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis.","REDUCED SUGAR RESPONSE 4 (RSR4)","(PDX1);ARABIDOPSIS THALIANA PYRIDOXINE BIOSYNTHESIS 1.3 (ATPDX1.3); (ATPDX1);PYRIDOXINE BIOSYNTHESIS 1.3 (PDX1.3);REDUCED SUGAR RESPONSE 4 (RSR4)"]
["AT5G17550","red","Encodes the predominant PEX19 peroxin isoform, a cytosolic chaperone for peroxisome membrane proteins (PMPs) that delivers PMPs to the endoplasmic reticulum or peroxisomal membrane. It is predominantly cytosolic, forms dimers, promotes peroxisome function and is essential for viability. The protein is farnesylated in vivo through the actions of ERA1 and PLP.","PEROXIN 19-2 (PEX19-2)","(PEX19B); (AtPEX19-2);PEROXIN 19-2 (PEX19-2)"]
["AT4G22990","red","Encodes a member of the PHOSPHATE TRANSPORTER 5 family (PHT5;3). Overexpression of PHT5:3 leads to Pi sequestration into vacuoles and altered regulation of Pi starvation-responsive genes.","(PHT5;3)","(PHT5;3)"]
["AT1G21000","red","PLATZ transcription factor family protein;(source:Araport11)","(PLATZ1)","(PLATZ1);ABA-INDUCED EXPRESSION 1 (AIN1)"]
["AT2G40650","red","PRP38 family protein;(source:Araport11)","(PRP38)","(PRP38)"]
["AT3G12530","red","PSF2;(source:Araport11)","(PSF2)","(PSF2)"]
["AT5G22750","red","DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer","(RAD5)","(RAD5A); (RAD5)"]
["AT3G61620","red","exonuclease RRP41 (RRP41)","(RRP41)","(RRP41)"]
["AT1G21650","red","Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality.","(SECA2)","(SECA2); (ANU1)"]
["AT3G46960","red","The gene encodes a DExD&#8260;H box RNA helicase, involved in the regulation of K+ deprivation stress response.SKI2 encodes the RNA helicase subunit of the SKI complex. Mutation of SKI2 leads to production of secondary siRNAs from miRNA target transcripts","(SKI2)","(SKI2)"]
["AT5G44500","red","Small nuclear ribonucleoprotein family protein;(source:Araport11)","(SMBA)","(SMBA)"]
["AT2G47640","red","Small nuclear ribonucleoprotein family protein;(source:Araport11)","(SMD2A)","(SMD2A)"]
["AT1G20580","red","Core component of spliceosomal snRNP.","(SMD3B)","(SMD3B)"]
["AT5G61770","red","A single-copy gene encoding a 346 aa protein with a single Brix domain. Similar to yeast ribosome biogenesis proteins Ssf1/2. Homozygotes are embryo lethal but analysis of VIGS induced somatic mutants indicates a role in rRNA processing.","PETER PAN-LIKE PROTEIN (PPAN)","(SNAIL1);PETER PAN-LIKE PROTEIN (PPAN)"]
["AT1G21460","red","Nodulin MtN3 family protein;(source:Araport11)","(SWEET1)","(SWEET1); (AtSWEET1)"]
["AT4G34290","red","SWIB/MDM2 domain superfamily protein;(source:Araport11)","(SWIB3)","(SWIB3)"]
["AT3G18370","red","C2 domain-containing protein;(source:Araport11)","(ATSYTF)","(SYTF); (ATSYTF); (NTMC2TYPE3); (NTMC2T3)"]
["AT4G23050","red","Raf-like kinase involved in TMB induced seed dormancy.","(TES1)","(TES1)"]
["AT1G68730","red","TIM15 homolog; PAM interacting protein.","(TIM15-1)","(TIM15-1)"]
["AT2G22400","red","TRM4B is a cytosine-5--methyltransferase. Mutants have decreased methyl cytosine and defects in root development.","(TRM4B)","(TRM4B); (ATTRM4B)"]
["AT1G76120","red","Enzyme for the pseudouridine (&#936;) to uridine (U) conversion.","(TRUA1B)","(TRUA1B)"]
["AT5G35400","red","Enzyme for the pseudouridine (&#936;) to uridine (U) conversion.","(TRUA5)","(TRUA5)"]
["AT3G04820","red","Enzyme for the pseudouridine (&#936;) to uridine (U) conversion.","(TRUD1)","(TRUD1)"]
["AT1G30680","red","Twinkle is a dual localized (mitochondria and chloroplast) DNA primase-helicase. It synthesizes RNA primers from a 5&#8242; -(G/C)GGA-3&#8242; template, where the last two 3' nucleotides are cryptic. Mitochondrial protein involved in DNA replication which binds to DNA polymerases, Pol1A and Pol1B.","ARABIDOPSIS TWINKLE HOMOLOG (ATH)","(TWINKLE);ARABIDOPSIS TWINKLE HOMOLOG (ATH)"]
["AT1G14205","red","Member of the uL18 RNA-binding protein family. uL18 proteins share a short structurally conserved domain that binds the 5S rRNA and allow its incorporation into ribosomes. Essential for the splicing of the first intron of rps12 in plastid.","(U18-L8)","(U18-L8)"]
["AT5G49665","red","E3 ubiquitin ligase involved in root gravitropism.","(WAV3)","(WAV3)"]
["AT1G51510","red","This gene is predicted to encode a protein involved in the exon junction complex. Though there is a predicted RNA binding motif, in the Drosophila ortholog (33% identity), this motif mediates interactions with Mago and is not available for RNA binding. The Arabidopsis Y14 protein appears to be predominantly nucleolar, but there is also some evidence for its presence in the cytoplasm.","(Y14)","(Y14)"]
["AT1G67210","red","Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein;(source:Araport11)","(ZCCHC8B)","(ZCCHC8B)"]
["AT5G59440","red","Encodes thymidylate kinase which exists in two isoforms in plants. The longer variant of 263 amino acids with a N-terminal extension that is required for localization to the mitochondrion. The second isoform of 224 residues is localized to the cytoplasm and nucleoplasm. Peak of expression occurs during G1/S phase transition.","ZEUS1 (ZEU1)","(ZEUS1);ZEUS1 (ZEU1)"]
["AT1G09100","red","Encodes RPT5b (Regulatory Particle 5b), one of the six AAA-ATPases of the proteasome regulatory particle. Essential for gametophyte development. In Arabidopsis, the RPT5 subunit is encoded by two highly homologous genes, RPT5a and RPT5b. RPT5a and RPT5b show accession-dependent functional redundancy. In Wassilewskija (Ws) accession: mutant alleles of RPT5a displayed 50% pollen lethality, indicating that RPT5a is essential for male gametophyte development. In the Columbia (Col) accession, a rpt5a mutant allele did not display such a phenotype because the RPT5b Col allele complements the rpt5a defect in the male gametophyte, whereas the RPT5b Ws allele does not. Double rpt5a rpt5b mutants in Col background showed a complete male and female gametophyte lethal phenotype.","26S PROTEASOME AAA-ATPASE SUBUNIT RPT5B (RPT5B)","26S PROTEASOME AAA-ATPASE SUBUNIT RPT5B (RPT5B)"]
["AT3G04770","red","40s ribosomal protein SA B;(source:Araport11)","40S RIBOSOMAL PROTEIN SA B (RPSAb)","40S RIBOSOMAL PROTEIN SA B (RPSAb);RIBOSOMAL PROTEIN US2Y (US2Y)"]
["AT2G05830","red","Encodes a 5-methylthioribose-1-phosphate isomerase.","5-METHYLTHIORIBOSE KINASE 1 (MTI1)","5-METHYLTHIORIBOSE KINASE 1 (MTI1);5-METHYLTHIORIBOSE-1-PHOSPHATE-ISOMERASE1 (MTI1)"]
["AT1G78380","red","Encodes a glutathione transferase that is a member of Tau GST gene family. Expression is induced by drought stress, oxidative stress, and high doses of auxin and cytokinin. naming convention according to Wagner et al. (2002) The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.","GLUTATHIONE S-TRANSFERASE TAU 19 (GSTU19)","A. THALIANA GLUTATHIONE S-TRANSFERASE TAU 19 (ATGSTU19);GLUTATHIONE TRANSFERASE 8 (GST8);GLUTATHIONE S-TRANSFERASE TAU 19 (GSTU19)"]
["AT2G02740","red","Encodes a homolog of the potato p24 protein. It shares the conserved KGKAAL domain, a putative DNA-binding domain, with potato p24 and is localized to the plastid and not the nucleus.","WHIRLY 3 (WHY3)","A. THALIANA WHIRLY 3 (ATWHY3);PLASTID TRANSCRIPTIONALLY ACTIVE11 (PTAC11);WHIRLY 3 (WHY3)"]
["AT5G61930","red","ACCUMULATION OF PHOTOSYSTEM ONE 3","ACCUMULATION OF PHOTOSYSTEM ONE 3 (APO3)","ACCUMULATION OF PHOTOSYSTEM ONE 3 (APO3)"]
["AT2G05710","red","Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. One member of the family (ACO1 - At35830) was shown to specifically bind to the 5' UTR of CSD2 in vitro. ACO3 is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. The mRNA is cell-to-cell mobile.","ACONITASE 3 (ACO3)","ACONITASE 3 (ACO3)"]
["AT3G56510","red","Involved in regulation of seed longevity, positively regulated by E3 ligase ATL5. ATL5 promotes the polyubiquitination and degradation of the ABT1 protein posttranslationally.","ACTIVATOR OF BASAL TRANSCRIPTION 1 (ABT1)","ACTIVATOR OF BASAL TRANSCRIPTION 1 (ABT1)"]
["AT4G16760","red","Encodes a medium to long-chain acyl-CoA oxidase. Catalyzes the first step of fatty acid beta-oxidation. Involved in jasmonate biosynthesis. Gene expression is induced by wounding, drought stress, abscisic acid, and jasmonate.","ACYL-COA OXIDASE 1 (ACX1)","ACYL-COA OXIDASE 1 (ACX1); (ATACX1)"]
["AT1G06290","red","Encodes an acyl-CoA oxidase with specificity for medium chain fatty acids. The mRNA is cell-to-cell mobile.","ACYL-COA OXIDASE 3 (ACX3)","ACYL-COA OXIDASE 3 (ACX3); (ATACX3)"]
["AT2G13360","red","Encodes a peroxisomal photorespiratory enzyme that catalyzes transamination reactions with multiple substrates. It is involved in photorespiration.","ALANINE:GLYOXYLATE AMINOTRANSFERASE (AGT)","ALANINE:GLYOXYLATE AMINOTRANSFERASE (AGT);ALANINE:GLYOXYLATE AMINOTRANSFERASE 1 (AGT1);L-SERINE:GLYOXYLATE AMINOTRANSFERASE (SGAT)"]
["AT2G28800","red","member of Chloroplast membrane protein ALBINO3 family. Similar to pea PPF1 and may play a role in plant senescence.","ALBINO 3 (ALB3)","ALBINO 3 (ALB3); (ABL3)"]
["AT1G01520","red","RVE3 is one of eleven homologous MYB-like transcription factors in Arabidopsis and a member of the RVE8 clade. Plays a minor role in clock regulation.","ALTERED SEED GERMINATION 4 (ASG4)","ALTERED SEED GERMINATION 4 (ASG4);REVEILLE 3 (REV3)"]
["AT5G64210","red","encodes an isoform of alternative oxidase, which is expressed in rosettes, stems, and roots. Transcript accumulates in dry seeds and decreased upon germination and is not affected by actinomycin A. Protein is localized to mitochondria.","ALTERNATIVE OXIDASE 2 (AOX2)","ALTERNATIVE OXIDASE 2 (AOX2)"]
["AT4G21530","red","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)","ANAPHASE PROMOTING COMPLEX 4 (APC4)","ANAPHASE PROMOTING COMPLEX 4 (APC4)"]
["AT3G48150","red","anaphase-promoting complex or cyclosome subunit","ANAPHASE-PROMOTING COMPLEX SUBUNIT 8 (APC8)","ANAPHASE-PROMOTING COMPLEX SUBUNIT 8 (APC8); (CDC23)"]
["AT1G15510","red","Encodes a pentatricopeptide repeat protein required for chloroplast transcript accD RNA editing and early chloroplast biogenesis.","EARLY CHLOROPLAST BIOGENESIS2 (ECB2)","ARABIDOPSIS EARLY CHLOROPLAST BIOGENESIS2 (ATECB2);VANILLA CREAM 1 (VAC1);EARLY CHLOROPLAST BIOGENESIS2 (ECB2)"]
["AT3G23620","red","BRIX domain containing protein, similar to RNA biogenesis factors in yeast. Binds rRNA and likely also functions in RNA biogenesis in Arabidopsis. Essential gene, mutants are embryo lethal and does not transmit well through the gametophyte.","ARABIDOPSIS HOMOLOG OF YEAST RPF2 (ARPF2)","ARABIDOPSIS HOMOLOG OF YEAST RPF2 (ARPF2)"]
["AT2G37990","red","ribosome biogenesis regulatory protein (RRS1) family protein;(source:Araport11)","ARABIDOPSIS HOMOLOG OF YEAST RRS1 (ARRS1)","ARABIDOPSIS HOMOLOG OF YEAST RRS1 (ARRS1)"]
["AT3G01310","red","Encodes a functional VIP1/PPIP5K-type ATP-grasp kinase that is involved in both InsP6 to InsP7 conversion and InsP7 to InsP8 conversion, producing the InsP8 cofactor of the ASK1-COI1-JAZ-jasmonate co-receptor complex. It is the major isoform in plants, is required for jasmonate-dependent defenses, and plays an important role in plant defenses against necrotrophic fungi and insect herbivores.","ARABIDOPSIS HOMOLOG OF YEAST VIP1 1 (ATVIP1)","ARABIDOPSIS HOMOLOG OF YEAST VIP1 1 (ATVIP1);VIP HOMOLOG2 (VIH2);VIP1 HOMOLOG 1 (VIP1)"]
["AT1G52930","red","Encodes one of two Arabidopsis orthologs of yeast BRX1, a protein involved in maturation of the large ribosomal subunit. The proteins are mainly localized in nucleolus. Mutant plants are affected in pre-rRNA processing.","ARABIDOPSIS HOMOLOGUE OF YEAST BRX1 2 (ATBRX1-2)","ARABIDOPSIS HOMOLOGUE OF YEAST BRX1 2 (ATBRX1-2)"]
["AT5G16180","red","Promotes the splicing of chloroplast group II introns. Splices atpF introns.","ORTHOLOG OF MAIZE CHLOROPLAST SPLICING FACTOR CRS1 (CRS1)","ARABIDOPSIS ORTHOLOG OF MAIZE CHLOROPLAST SPLICING FACTOR CRS1 (ATCRS1);ORTHOLOG OF MAIZE CHLOROPLAST SPLICING FACTOR CRS1 (CRS1)"]
["AT4G29510","red","Has arginine N-methyltransferase activity. Modifies AtMBD7.","ARGININE METHYLTRANSFERASE 11 (PRMT11)","ARABIDOPSIS THALIANA ARGININE METHYLTRANSFERASE 11 (ATPRMT11);ARGININE METHYLTRANSFERASE 11 (PRMT11);ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 1B (ATPRMT1B);PROTEIN ARGININE METHYLTRANSFERASE 1B (PRMT1B)"]
["AT5G64300","red","encodes GTP cyclohydrolase II that can functionally complement E. coli mutant deficient in this gene. It also has 3,4-dihydroxy-2-butanone-4-phosphate synthase activity which makes it a bifunctional enzyme involved in the formation of the pyrimidine and of the carbohydrate from GTP and ribulose-5-phosphate, respectively The mRNA is cell-to-cell mobile.","GTP CYCLOHYDROLASE II (GCH)","ARABIDOPSIS THALIANA GTP CYCLOHYDROLASE II (ATGCH);RIBOFLAVIN A1 (RIBA1);ARABIDOPSIS THALIANA RIBOFLAVIN A1 (ATRIBA1);RED FLUORESCENT IN DARKNESS 1 (RFD1);GTP CYCLOHYDROLASE II (GCH)"]
["AT2G32460","red","Member of the R2R3 factor gene family.","MYB DOMAIN PROTEIN 101 (MYB101)","ARABIDOPSIS THALIANA MYB 1 (ATM1);ABNORMAL SHOOT 7 (ABS7); (ATMYB101);MYB DOMAIN PROTEIN 101 (MYB101);ABC TRANSPORTER OF THE MITOCHONDRION 1 (ATM1)"]
["AT5G15550","red","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)","ARABIDOPSIS THALIANA PESCADILLO ORTHOLOG (ATPEP2)","ARABIDOPSIS THALIANA PESCADILLO ORTHOLOG (ATPEP2); (ATPEIP2)"]
["AT2G40360","red","Encodes BOP1, an ortholog of Block of cell proliferation (BOP) protein. A T-DNA null allele of the BOP1 gene is lethal, and a 50% decrease in transcript accumulation is sufficient to cause severe developmental defects linked to defective cell division.","ARABIDOPSIS THALIANA PESCADILLO ORTHOLOG1 (ATPEP1)","ARABIDOPSIS THALIANA PESCADILLO ORTHOLOG1 (ATPEP1); (ATPEIP1);BLOCK OF CELL PROLIFERATION 1 (BOP1)"]
["AT3G06930","red","Encodes an type I protein arginine methyltransferase. PRMT4b can catalyze the asymmetric dimethylation of arginines 2,17, and 26 on histone 3 and can also methylate myelin basic protein in vitro. Double mutants lacking PRMT4a and 4b have reduced levels of histone 3 methylated at R17. These double mutants flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts.","PROTEIN ARGININE METHYLTRANSFERASE 4B (PRMT4B)","ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 4B (ATPRMT4B);PROTEIN ARGININE METHYLTRANSFERASE 4B (PRMT4B)"]
["AT4G24770","red","Encodes a chloroplast RNA-binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Required for editing and stability of specific chloroplast mRNAs.","31-KDA RNA BINDING PROTEIN (RBP31)","ARABIDOPSIS THALIANA RNA BINDING PROTEIN, APPROXIMATELY 31 KD (ATRBP31); (CP31A); (CP31); (CP33A); (ATRBP33);31-KDA RNA BINDING PROTEIN (RBP31)"]
["AT1G06950","red","Encodes a protein thought to be a part of the translocon at the chloroplast inner envelope. Involved in protein import into the chloroplast and chloroplast biogenesis. C-terminal half of Tic110 functions as scaffolds for protein-protein interactions.","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 110 (TIC110)","ARABIDOPSIS THALIANA TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 110 (ATTIC110);TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 110 (TIC110)"]
["AT1G68310","red","Encodes a protein that has been shown to specifically interact with a sequence motif, PIEPPPHH, in the cytoplasmic tail of a membrane protein that directs the protein from the ER to vacuoles where it is internalized. Required for both leaf adaxial?abaxial polarity formation and normal cell proliferation. It is part of a protein complex with CIA1, NAR1, and MET18, which are highly conserved in eukaryotes and are involved in the biogenesis of cytosolic and nuclear Fe-S proteins.","AS1/2 ENHANCER7 (AE7)","AS1/2 ENHANCER7 (AE7)"]
["AT4G19710","red","Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine.","ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE II (AK-HSDH II)","ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE II (AK-HSDH II);ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE (AK-HSDH)"]
["AT3G22150","red","Involved in RNA editing of plastid atpF and mitochondrial nad5.","ATPF EDITING FACTOR 1 (AEF1)","ATPF EDITING FACTOR 1 (AEF1)"]
["AT5G06160","red","Encodes a protein with similarity to pre-mRNA splicing factor SF3a60 that is involved in gametic cell fate determination. Loss of function results in the ectopic expression of egg cell makers suggesting a role in restriction of gametic cell fate. Expressed strongly in gametophytes and weakly in sporophytes.","ATROPOS (ATO)","ATROPOS (ATO)"]
["AT4G14410","red","Basic helix loop helix transcription factor involved in stress mediated signaling during germination.","BASIC HELIX-LOOP-HELIX 104 (bHLH104)","BASIC HELIX-LOOP-HELIX 104 (bHLH104)"]
["AT1G17880","red","basic transcription factor 3;(source:Araport11)","BASIC TRANSCRIPTION FACTOR 3 (BTF3)","BASIC TRANSCRIPTION FACTOR 3 (BTF3); (ATBTF3)"]
["AT5G08130","red","Encodes a basic helix-loop-helix (bHLH) family protein BIM1 (BES1-INTERACTING MYC-LIKE 1), involved in brassinosteroid signaling. It synergistically interacts with BES1 to bind to E box sequences (CANNTG). Positively modulates the shade avoidance syndrome in Arabidopsis seedlings.","BES1-INTERACTING MYC-LIKE1 (BIM1)","BES1-INTERACTING MYC-LIKE1 (BIM1)"]
["AT4G35090","red","Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2).","CATALASE 2 (CAT2)","CATALASE 2 (CAT2)"]
["AT2G38270","red","Encodes protein homologous to CXIP1. CXIP1 is a PICOT domain containing protein interacts with CAX1, a high capacity calcium transporter. However, CXP2 does not interact with CAX1 and only moderately activates another calcium transporter CAX4.","CAX-INTERACTING PROTEIN 2 (CXIP2)","CAX-INTERACTING PROTEIN 2 (CXIP2);GLUTAREDOXIN 2 (ATGRX2);GLUTAREDOXIN 16 (ATGRXS16)"]
["AT1G36320","red","Located in both chloroplasts and mitochondria; absence of CDB1L results in impaired embryo development. Possibly similar function as CDB1 in both mitochondria and chloroplasts.","CDB1-LIKE (CDB1L)","CDB1-LIKE (CDB1L)"]
["AT2G16800","red","Encodes a nuclear-encoded chloroplast protein that plays an important role in vegetative growth, female gametogenesis, and embryogenesis likely by mediating chloroplast integrity and development.","CHLOROPLAST PROTEIN FOR GROWTH AND FERTILITY 2 (CGF2)","CHLOROPLAST PROTEIN FOR GROWTH AND FERTILITY 2 (CGF2)"]
["AT2G20020","red","Promotes the splicing of chloroplast group II introns. Splices clpP-1 and ropC1 introns.","CHLOROPLAST RNA SPLICING2-ASSOCIATED FACTOR1 (CAF1)","CHLOROPLAST RNA SPLICING2-ASSOCIATED FACTOR1 (CAF1); (ATCAF1)"]
["AT1G11290","red","Pentatricopeptide Repeat Protein containing the DYW motif. Required for editing of multiple plastid transcripts. Endonuclease activity.","CHLORORESPIRATORY REDUCTION22 (CRR22)","CHLORORESPIRATORY REDUCTION22 (CRR22)"]
["AT2G42790","red","Encodes a peroxisomal citrate synthase that is expressed throughout seedling and shoot development.","CITRATE SYNTHASE 3 (CSY3)","CITRATE SYNTHASE 3 (CSY3)"]
["AT5G14250","red","Encodes subunit 3 of the COP9 signalosome.","CONSTITUTIVE PHOTOMORPHOGENIC 13 (COP13)","CONSTITUTIVE PHOTOMORPHOGENIC 13 (COP13);FUSCA 11 (FUS11);COP9 SIGNALOSOME SUBUNIT 3 (CSN3)"]
["AT3G01490","red","Belongs to the Raf-like kinase subfamily of the mitogen-activated protein kinase kinase kinase (MAPKKK) family. Negatively regulates stomatal opening by negatively regulating plasma membrane H+-ATPase phosphorylation.","CONVERGENCE OF BLUE LIGHT AND CO2 (CBC1)","CONVERGENCE OF BLUE LIGHT AND CO2 (CBC1)"]
["AT4G38100","red","CURVATURE THYLAKOID 1D-like protein; involved in thylakoid membrane organization.","CURVATURE THYLAKOID 1D (CURT1D)","CURVATURE THYLAKOID 1D (CURT1D)"]
["AT3G17700","red","cyclic nucleotide-binding transporter 1, member of a family of cyclic nucleotide gated channels. The mRNA is cell-to-cell mobile.","CYCLIC NUCLEOTIDE-BINDING TRANSPORTER 1 (CNBT1)","CYCLIC NUCLEOTIDE-BINDING TRANSPORTER 1 (CNBT1);CYCLIC NUCLEOTIDE-GATED CHANNEL 20 (ATCNGC20);CYCLIC NUCLEOTIDE GATED CHANNEL 20 (CNGC20)"]
["AT5G22110","red","Encodes a protein with similarity to DNA polymerase epsilon subunit B an essential gene that is required for DNA replication. Homozygous mutants are embryo lethal. Expressed in meristematic , rapidly dividing regions.","DNA POLYMERASE EPSILON SUBUNIT B2 (DPB2)","CYCLOPS 2 (CYL2);DNA POLYMERASE EPSILON SUBUNIT B2 (ATDPB2);DNA POLYMERASE EPSILON SUBUNIT B2 (DPB2)"]
["AT1G77030","red","Required for functional maturation of male and female gametophytes.","DEAD-BOX RNA HELICASE 29 (RH29)","DEAD-BOX RNA HELICASE 29 (RH29)"]
["AT4G34020","red","Encodes a homolog of animal DJ-1 superfamily protein. In the A. thaliana genome, three genes encoding close homologs of human DJ-1 were identified AT3G14990 (DJ1A), AT1G53280 (DJ1B) and AT4G34020 (DJ1C). Among the three homologs, DJ1C is essential for chloroplast development and viability.","DJ-1 HOMOLOG C (DJ1C)","DJ-1 HOMOLOG C (DJ1C);DJ-1 HOMOLOG C (AtDJ1C); (DJ-1C)"]
["AT3G10690","red","Encodes a protein that when expressed together with GYRB2 generates an active supercoiling DNA gyrase enzyme that shares similar properties to its bacterial counterpart, including sensitivity to gyrase-specific antibiotics.","DNA GYRASE A (GYRA)","DNA GYRASE A (GYRA)"]
["AT1G28330","red","dormancy-associated protein (DRM1)","DORMANCY-ASSOCIATED PROTEIN-LIKE 1 (DYL1)","DORMANCY-ASSOCIATED PROTEIN 1 (DRM1);DORMANCY-ASSOCIATED PROTEIN-LIKE 1 (DYL1); (ATDRM1)"]
["AT5G14960","red","DP-E2F-like 2;(source:Araport11)","DP-E2F-LIKE 2 (DEL2)","DP-E2F-LIKE 2 (DEL2); (E2FD); (E2L1)"]
["AT1G64110","red","Target promoter of the male germline-specific transcription factor DUO1.","DUO1-ACTIVATED ATPASE 1 (DAA1)","DUO1-ACTIVATED ATPASE 1 (DAA1)"]
["AT3G05640","red","EGR1 functions as a negative regulator of plant growth with prominent effect on plant growth during drought stress.EGR1 regulates microtubule organization and likely affects additional cytoskeleton and trafficking processes along the plasma membrane.","E GROWTH-REGULATING 1 (EGR1)","E GROWTH-REGULATING 1 (EGR1);PROTEIN PHOSPHATASE 2CF1 (ATPP2CF1)"]
["AT3G60500","red","Encodes a 3'-5' exoribonuclease, positively regulates CER3 transcription, involved in cuticular wax biosynthesis.","ECERIFERUM 7 (CER7)","ECERIFERUM 7 (CER7); (G3)"]
["AT3G11220","red","A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1?ELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate.","ELONGATA 1 (ELO1)","ELONGATA 1 (ELO1); (ATELP4)"]
["AT1G49540","red","elongator protein 2;(source:Araport11)","ELONGATOR PROTEIN 2 (ELP2)","ELONGATOR SUBUNIT 2 (AtELP2);ELONGATOR PROTEIN 2 (ELP2)"]
["AT3G61780","red","embryo defective 1703;(source:Araport11)","EMBRYO DEFECTIVE 1703 (emb1703)","EMBRYO DEFECTIVE 1703 (emb1703)"]
["AT4G10760","red","Encodes a member of a core set of mRNA m6A writer proteins and is required for N6-adenosine methylation of mRNA.","MRNAADENOSINE METHYLASE (MTA)","EMBRYO DEFECTIVE 1706 (EMB1706);MRNAADENOSINE METHYLASE (MTA)"]
["AT2G21710","red","Mitochondrial transcription termination factor family protein;(source:Araport11)","EMBRYO DEFECTIVE 2219 (EMB2219)","EMBRYO DEFECTIVE 2219 (EMB2219)"]
["AT5G60540","red","Encodes a protein predicted to function in tandem with PDX1 to form glutamine amidotransferase complex with involved in vitamin B6 biosynthesis. PDX2 is predicted to function as glutaminase within the complex.","PYRIDOXINE BIOSYNTHESIS 2 (PDX2)","EMBRYO DEFECTIVE 2407 (EMB2407);PYRIDOXINE BIOSYNTHESIS 2 (PDX2);PYRIDOXINE BIOSYNTHESIS 2 (ATPDX2)"]
["AT1G70070","red","Allelic to ISE2(increased size exclusion limit of plasmodesmata 2). Mutants maintain dilated plasmodesmata at the embryonic torpedo stage.","EMBRYO DEFECTIVE 25 (EMB25)","EMBRYO DEFECTIVE 25 (EMB25);PIGMENT DEFECTIVE 317 (PDE317);INCREASED SIZE EXCLUSION LIMIT 2 (ISE2); (115J-4A)"]
["AT3G20440","red","Encodes BE1, a putative glycoside hydrolase. Involved in organogenesis and somatic embryogenesis by regulating carbohydrate metabolism. Mutation in BE1 has pleotrophic effect on the whole plant development.","EMBRYO DEFECTIVE 2729 (EMB2729)","EMBRYO DEFECTIVE 2729 (EMB2729);BRANCHING ENZYME 1 (BE1)"]
["AT5G63960","red","Encodes the catalytic subunits of DNA polymerase &#948;, which is involved in the deposition of epigenetic marks.","GIGANTEA SUPPRESSOR5 (GIS5)","EMBRYO DEFECTIVE 2780 (EMB2780);GIGANTEA SUPPRESSOR5 (GIS5)"]
["AT2G31060","red","elongation factor family protein;(source:Araport11)","EMBRYO DEFECTIVE 2785 (EMB2785)","EMBRYO DEFECTIVE 2785 (EMB2785)"]
["AT5G05680","red","Encodes MOS7 (Modifier of snc1,7), homologous to human and Drosophila melanogaster nucleoporin Nup88. Resides at the nuclear envelope. Modulates the nuclear concentrations of certain defense proteins regulates defense outputs.","MODIFIER OF SNC1,7 (MOS7)","EMBRYO DEFECTIVE 2789 (EMB2789);MODIFIER OF SNC1,7 (MOS7)"]
["AT5G40480","red","embryo defective 3012;(source:Araport11)","EMBRYO DEFECTIVE 3012 (EMB3012)","EMBRYO DEFECTIVE 3012 (EMB3012)"]
["AT1G59990","red","Chloroplast DEAD-box ATP-dependent RNA helicase which interacts with LEA5 in chloroplasts.","EMBRYO DEFECTIVE 3108 (EMB3108)","EMBRYO DEFECTIVE 3108 (EMB3108);HEAVY SEED 3 (HS3);RNA HELICASE 22 (RH22)"]
["AT3G14900","red","hypothetical protein;(source:Araport11)","EMBRYO DEFECTIVE 3120 (EMB3120)","EMBRYO DEFECTIVE 3120 (EMB3120)"]
["AT3G17910","red","Encodes one of two Arabidopsis mitochondrial proteins similar to human SURF1 which is known to be involved in cytochrome c oxidase assembly. Mutations result in embryo lethality.","SURFEIT 1A (SURF1A)","EMBRYO DEFECTIVE 3121 (EMB3121);SURFEIT 1 (SURF1);SURFEIT 1A (SURF1A); (ATSURF1A)"]
["AT3G60360","red","embryo sac development arrest 14;(source:Araport11)","EMBRYO SAC DEVELOPMENT ARREST 14 (EDA14)","EMBRYO SAC DEVELOPMENT ARREST 14 (EDA14);U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11 (UTP11)"]
["AT3G15140","red","ERI (At3g15140) encodes a protein of 337 amino acids of the ribonuclease H-like superfamily. The protein contains both DEDDh and SAP domains.The first exon contains a TCT-microsatellite structure (starting 226 bp after ATG) that, based on sequence complementarity, is a miR5021-cleavage target site. ERI is predicted to function as an siRNA exonuclease. Overexpression leads to increased post transcriptional gene silencing and reduced numbers of 21mers. Macroscopically, the growth rate is increased in overexpressors leading to increased biomass.","ENHANCER OF RNAI (ERI-1)","ENHANCER OF RNAI (ERI-1)"]
["AT2G32440","red","ent-kaurenoic acid hydroxylase (KAO2)","ENT-KAURENOIC ACID HYDROXYLASE 2 (KAO2)","ENT-KAURENOIC ACID HYDROXYLASE 2 (KAO2); (CYP88A4);ARABIDOPSIS ENT-KAURENOIC ACID HYDROXYLASE 2 (ATKAO2)"]
["AT1G31660","red","Encodes a protein that is a ribosome biogenesis co-factor. Mutants display aberrant RNA processing and male and female gametophyte development.","ESSENTIAL NUCLEAR PROTEIN 1 (ENP1)","ESSENTIAL NUCLEAR PROTEIN 1 (ENP1); (ATENP1)"]
["AT3G04580","red","Ethylene receptor, subfamily 2. Has serine kinase activity.","ETHYLENE INSENSITIVE 4 (EIN4)","ETHYLENE INSENSITIVE 4 (EIN4)"]
["AT2G27050","red","ethylene-insensitive3-like1 (EIL1) The mRNA is cell-to-cell mobile.","ETHYLENE-INSENSITIVE3-LIKE 1 (EIL1)","ETHYLENE-INSENSITIVE3-LIKE 1 (EIL1); (AtEIL1)"]
["AT1G04170","red","protein synthesis initiation factor eIF2 gamma The mRNA is cell-to-cell mobile.","EUKARYOTIC TRANSLATION INITIATION FACTOR 2 GAMMA SUBUNIT (EIF2 GAMMA)","EUKARYOTIC TRANSLATION INITIATION FACTOR 2 GAMMA SUBUNIT (EIF2 GAMMA)"]
["AT3G11400","red","One of the 2 genes that code for the G subunit of eukaryotic initiation factor 3 (EIF3). The mRNA is cell-to-cell mobile.","EUKARYOTIC TRANSLATION INITIATION FACTOR 3G1 (EIF3G1)","EUKARYOTIC TRANSLATION INITIATION FACTOR 3G1 (EIF3G1); (ATEIF3G1)"]
["AT3G03950","red","Physically interacts with CIPK1. Located in the nucleus.","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 1 (ECT1)","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 1 (ECT1)"]
["AT3G13460","red","Physically interacts with CIPK1. ECT2 regulates the mRNA levels of the roteasome regulator PTRE1 and of several 20S proteasome subunits, resulting in enhanced 26S proteasome activity. YTHDF protein which togeteher with ECT3 and ECT4 is involved in cell proliferation during plant organogenesis.","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 2 (ECT2)","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 2 (ECT2)"]
["AT4G38580","red","putative farnesylated protein (At4g38580) mRNA, complete","FARNESYLATED PROTEIN 6 (FP6)","FARNESYLATED PROTEIN 6 (ATFP6);HEAVY METAL ASSOCIATED ISOPRENYLATED PLANT PROTEIN 26 (HIPP26);FARNESYLATED PROTEIN 6 (FP6);HEAVY METAL ASSOCIATED PROTEIN 40 (ATHMP40)"]
["AT2G34770","red","encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death.","FATTY ACID HYDROXYLASE 1 (FAH1)","FATTY ACID HYDROXYLASE 1 (FAH1);ARABIDOPSIS FATTY ACID HYDROXYLASE 1 (ATFAH1)"]
["AT5G52470","red","Encodes a fibrillarin, a key nucleolar protein in eukaryotes which associates with box C/D small nucleolar RNAs (snoRNAs) directing 2'-O-ribose methylation of the rRNA. This gene also encodes a novel box C/D snoRNA, U60.1f in its fifth intron that accumulates in seedlings and that their targeted residue on the 25 S rRNA is methylated.","FIBRILLARIN 1 (FIB1)","FIBRILLARIN 1 (FIB1);FIBRILLARIN 1 (FBR1);SKP1/ASK1-INTERACTING PROTEIN (SKIP7); (ATFBR1); (ATFIB1)"]
["AT2G31390","red","Encodes a member of the fructokinase gene family. Nomenclature according to Riggs 2017 has been adopted for the family by the community (personal communication, Boernke, Callis, Granot, Boernke, and Smeekens).","FRUCTOKINASE 2 (FRK2)","FRUCTOKINASE 1 (FRK1);FRUCTOKINASE 2 (FRK2)"]
["AT3G54090","red","Encodes a fructokinase-like protein (AT3G54090/FLN1, AT1G69200/FLN2), a member of the pfkB-carbohydrate kinase family. FLN1 and FLN2 are potential plastidial thioredoxin z (TRX z) targets. Mutants display mutant chloroplast development, general plant growth and development defects and defects in PEP-dependent transcription.","FRUCTOKINASE-LIKE 1 (FLN1)","FRUCTOKINASE-LIKE 1 (FLN1)"]
["AT1G69200","red","Encodes a fructokinase-like protein (AT3G54090/FLN1, AT1G69200/FLN2), a member of the pfkB-carbohydrate kinase family. FLN1 and FLN2 are potential plastidial thioredoxin z (TRX z) targets. Mutants display mutant chloroplast development, general plant growth and development defects and defects in PEP-dependent transcription. The mRNA is cell-to-cell mobile.","FRUCTOKINASE-LIKE 2 (FLN2)","FRUCTOKINASE-LIKE 2 (FLN2)"]
["AT1G43670","red","Encodes a fructose-1,6-bisphosphatase. This enzyme, in addition to catalyzing the formation of fructose-6-phosphate for sucrose biosynthesis, appears to play a role in fructose-mediated signaling that is independent of its enzymatic activity. atcfbp-1/fins1 mutants have reduced photosynthetic rates, elevated levels of starch and reduced levels of sucrose during the day. Although the protein is expected to be cytosolic, a GFP-tagged version localizes to the cytoplasm and the nucleus. The mRNA is cell-to-cell mobile.","FRUCTOSE-1,6-BISPHOSPHATASE (FBP)","FRUCTOSE INSENSITIVE 1 (FINS1);ARABIDOPSIS THALIANA CYTOSOLIC FRUCTOSE-1,6-BISPHOSPHATASE (AtcFBP);FRUCTOSE-1,6-BISPHOSPHATASE (FBP); (CYFBP)"]
["AT5G64580","red","Strong interaction with TIC inner envelope protein translocon which consists of Tic20/Tic56/Tic100/Tic214(Ycf1)(DOI:10.1105/tpc.18.00357).","EMBRYO DEFECTIVE 3144 (EMB3144)","FTSH (FILAMENTATION-TEMPERATURE-SENSITIVE PROTEIN H) INACTIVE 4 (FTSHI4);EMBRYO DEFECTIVE 3144 (EMB3144)"]
["AT3G61140","red","Represses photomorphogenesis and induces skotomorphogenesis in the dark. Component of the nuclear-localized COP9 complex. Mutants display striking purple coloration due to anthocyanin accumulation in their cotyledons, first become defective during embryogenesis and exhibit limited seedling development.","FUSCA 6 (FUS6)","FUSCA 6 (FUS6);ARABIDOPSIS THALIANA FUSCA 6 (ATFUS6);COP9 SIGNALOSOME SUBUNIT 1 (CSN1);CONSTITUTIVE PHOTOMORPHOGENIC 11 (COP11);EMBRYO DEFECTIVE 78 (EMB78);SHAGGY-LIKE KINASE 31 (ATSK31);SHAGGY-LIKE KINASE 31 (SK31); (ATCSN1)"]
["AT5G27320","red","Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4.","GA INSENSITIVE DWARF1C (GID1C)","GA INSENSITIVE DWARF1C (GID1C); (ATGID1C)"]
["AT5G48030","red","encodes a mitochondrially targeted DNAJ protein involved in female gametophyte development.","GAMETOPHYTIC FACTOR 2 (GFA2)","GAMETOPHYTIC FACTOR 2 (GFA2)"]
["AT3G16870","red","Encodes a member of the GATA factor family of zinc finger transcription factors.","GATA TRANSCRIPTION FACTOR 17 (GATA17)","GATA TRANSCRIPTION FACTOR 17 (GATA17)"]
["AT2G36340","red","DNA-binding storekeeper protein-related transcriptional regulator;(source:Araport11)","GEBP-LIKE PROTEIN 3 (GPL3)","GEBP-LIKE PROTEIN 3 (GPL3)"]
["AT1G54380","red","Encodes GEMIN2, a spliceosomal small nuclear ribonucleoprotein assembly factor conserved from yeast to humans. GEMIN2 is a key component of a posttranscriptional regulatory mechanism that ensures the appropriate acclimation of plants to daily and seasonal changes in temperature conditions. It controls the alternative splicing of several circadian clock genes and attenuates the effects of temperature on the circadian period.","GEMIN2 (GEMIN2)","GEMIN2 (GEMIN2)"]
["AT2G18440","red","Encodes a noncoding RNA, a member of an emerging class of transcripts that lack significant open reading frames and encode RNA as their final product. Has been identified as a translated small open reading frame by ribosome profiling.","GENE WITH UNSTABLE TRANSCRIPT 15 (GUT15)","GENE WITH UNSTABLE TRANSCRIPT 15 (GUT15);SHORT OPEN READING FRAME 20 (SORF20)"]
["AT2G31400","red","Encodes a a chloroplast-localized pentatricopeptide-repeat protein involved in regulation of nuclear gene expression.","GENOMES UNCOUPLED 1 (GUN1)","GENOMES UNCOUPLED 1 (GUN1)"]
["AT5G61030","red","Encodes a glycine-rich RNA binding protein that is involved in C-> U RNA editing in mitochondria. Gene expression is induced by cold. The mRNA is cell-to-cell mobile.","RNA-BINDING GLYCINE-RICH PROTEIN A7 (RBGA7)","GLYCINE-RICH RNA-BINDING PROTEIN 3 (GR-RBP3);RNA-BINDING GLYCINE-RICH PROTEIN A7 (RBGA7); (ORRM3)"]
["AT5G41650","red","Vicinal oxygen chelate (VOC) superfamily member. Responds to NaCl stress.","GLYOXALASE I-LIKE;10 (GLXI-LIKE;10)","GLYOXALASE I-LIKE;10 (GLXI-LIKE;10)"]
["AT1G67280","red","Encodes a Ni+ dependent glyoxylase.","GLYOXALASEI 6 (ATGLYI6)","GLYOXALASEI 6 (ATGLYI6)"]
["AT3G11450","red","Encodes a ZRF1 chromatin regulator. Functions in regulating plant growth and development.","GONIDIALESS A/ZUOTIN RELATED FACTOR A1 (ATGLSA1)","GONIDIALESS A/ZUOTIN RELATED FACTOR A1 (ATGLSA1);GONIDIALESS A/ZUOTIN RELATED FACTOR A2 (ATGLSA2);ZUOTIN-RELATED FACTOR 1A (ZRF1a)"]
["AT4G24150","red","Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower.","GROWTH-REGULATING FACTOR 8 (GRF8)","GROWTH-REGULATING FACTOR 8 (AtGRF8);GROWTH-REGULATING FACTOR 8 (GRF8); (ATMIN10)"]
["AT5G43960","red","Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11)","(ATG3BP7)","GTPASE?ACTIVATING PROTEIN SH3-DOMAIN?BINDING PROTEIN LIKE (G3BP-LIKE); (ATG3BP-2); (ATG3BP7)"]
["AT3G53630","red","hypothetical protein;(source:Araport11)","GUN1-INTERACTING PROTEIN 1 (GIP1)","GUN1-INTERACTING PROTEIN 1 (GIP1)"]
["AT5G10010","red","myosin-H heavy protein;(source:Araport11)","HEAT INTOLERANT 4 (HIT4)","HEAT INTOLERANT 4 (HIT4)"]
["AT3G23990","red","mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria.","HEAT SHOCK PROTEIN 60 (HSP60)","HEAT SHOCK PROTEIN 60 (HSP60);HEAT SHOCK PROTEIN 60-3B (HSP60-3B)"]
["AT3G02990","red","member of Heat Stress Transcription Factor (Hsf) family The mRNA is cell-to-cell mobile.","HEAT SHOCK TRANSCRIPTION FACTOR A1E (HSFA1E)","HEAT SHOCK TRANSCRIPTION FACTOR A1E (ATHSFA1E);HEAT SHOCK TRANSCRIPTION FACTOR A1E (HSFA1E)"]
["AT5G14570","red","Encodes ATNRT2.7, a nitrate transporter that controls nitrate content in seeds. Expression is detected in reproductive organs and peaks in seeds. Localized to the vacuolar membrane.","HIGH AFFINITY NITRATE TRANSPORTER 2.7 (NRT2.7)","HIGH AFFINITY NITRATE TRANSPORTER 2.7 (NRT2.7);HIGH AFFINITY NITRATE TRANSPORTER 2.7 (ATNRT2.7)"]
["AT3G44750","red","Encodes a histone deacetylase. Controls the development of adaxial/abaxial leaf polarity. Two lines with RNAi-directed against this gene show reduced Agrobacterium-mediated DNA transformation of the roots. Involved in development of the vascular tissue of the stem by affecting cell proliferation and differentiation.","HISTONE DEACETYLASE 3 (HDA3)","HISTONE DEACETYLASE 2A (HD2A); (ATHD2A);HISTONE DEACETYLASE 3 (HDA3); (HDT1); (HD2A)"]
["AT2G18050","red","encodes a structurally divergent linker histone whose gene expression is induced by dehydration and ABA. The mRNA is cell-to-cell mobile.","HISTONE H1-3 (HIS1-3)","HISTONE H1-3 (HIS1-3); (HON3)"]
["AT5G11170","red","One of two genes (AT5G11200, UAP56b and AT5G11170, UAP56a)encoding an ATP-dependent RNA helicase that localizes predominantly to euchromatic regions of Arabidopsis nuclei, and associates with genes transcribed by RNA polymerase II independently from the presence of introns. It is not detected at non-transcribed loci. It interacts with ssRNA, dsRNA and dsDNA, but not with ssDNA. Its ATPase activity is stimulated by RNA and dsDNA and its ATP-dependent RNA helicase activity unwinds dsRNA but not dsDNA.","HOMOLOG OF HUMAN UAP56 A (UAP56A)","HOMOLOG OF HUMAN UAP56 A (UAP56A)"]
["AT5G11200","red","One of two genes (AT5G11200, UAP56b and AT5G11170, UAP56a) encoding an ATP-dependent RNA helicase that localizes predominantly to euchromatic regions of Arabidopsis nuclei, and associates with genes transcribed by RNA polymerase II independently from the presence of introns. It is not detected at non-transcribed loci. It interacts with ssRNA, dsRNA and dsDNA, but not with ssDNA. Its ATPase activity is stimulated by RNA and dsDNA and its ATP-dependent RNA helicase activity unwinds dsRNA but not dsDNA.","HOMOLOG OF HUMAN UAP56 B (UAP56B)","HOMOLOG OF HUMAN UAP56 B (UAP56B)"]
["AT1G56110","red","NOP56-like protein","HOMOLOG OF NUCLEOLAR PROTEIN NOP56 (NOP56)","HOMOLOG OF NUCLEOLAR PROTEIN NOP56 (NOP56)"]
["AT3G57150","red","Encodes a putative pseudouridine synthase (NAP57).","HOMOLOGUE OF NAP57 (NAP57)","HOMOLOGUE OF NAP57 (NAP57); (AtNAP57); (CBF5); (AtCBF5); (TRUB1)"]
["AT3G08950","red","Encodes HCC1, homologue of the copper chaperone SCO1 (synthesis of cytochrome c oxidase 1) from the yeast Saccharomyces cerevisiae. SCO1 encodes a mitochondrial protein that is essential for the correct assembly of complex IV in the respiratory chain. HCC1 is localized in the mitochondrion. A chimeric yeast Sco1-Arabidopsis HCC1 protein complements yeast Sco1 activity. Embryos of hcc1 mutants became arrested at various developmental stages, mostly at the heart stage.","HOMOLOGUE OF THE COPPER CHAPERONE SCO1 (HCC1)","HOMOLOGUE OF THE COPPER CHAPERONE SCO1 (HCC1)"]
["AT1G12270","red","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","HOP1 (Hop1)","HOP1 (Hop1)"]
["AT1G24180","red","Arabidopsis thaliana pyruvate dehydrogenase E1a-like subunit. 81% identical to a previously characterized Arabidopsis mitochondrial PDH E1a-subunit, At1g59900. Serine 296 phosphorylation of IAR4 has critical function in root hair formation and root development. Changing Ser296 in IAR4 to Ala resulted in a phenotype intermediate between mutant and wild-type, while substitution to Asp was either lethal or caused an extreme dwarf phenotype.","IAA-CONJUGATE-RESISTANT 4 (IAR4)","IAA-CONJUGATE-RESISTANT 4 (IAR4)"]
["AT2G31830","red","Encodes a 5-inositol-polyphosphate phosphatase, that, in vitro, shows some activity against Ins(1,4,5)P3 and PI(3,4,5)P3, but even higher activity against PI(4,5)P2","INOSITOL-POLYPHOSPHATE 5-PHOSPHATASE 14 (5PTASE14)","INOSITOL-POLYPHOSPHATE 5-PHOSPHATASE 14 (5PTASE14)"]
["AT5G03290","red","Encodes a catalytic subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase. The mRNA is cell-to-cell mobile.","ISOCITRATE DEHYDROGENASE V (IDH-V)","ISOCITRATE DEHYDROGENASE V (IDH-V)"]
["AT3G21720","red","Encodes a glyoxylate cycle enzyme isocitrate lyase (ICL) involved in salt tolerance.","ISOCITRATE LYASE (ICL)","ISOCITRATE LYASE (ICL)"]
["AT4G32720","red","Encodes AtLa1, a member of the highly abundant phosphoprotein La proteins. Predominantly localized to the nucleoplasm and was also detected in the nucleolar cavity. Has RNA binding activity. Required for normal ribosome biogenesis and embryogenesis.","LA PROTEIN 1 (La1)","LA PROTEIN 1 (AtLa1);LA PROTEIN 1 (La1);INVOLVED IN RRNA PROCESSING 2 (IRP2)"]
["AT2G43970","red","RNA-binding protein;(source:Araport11)","LA RELATED PROTEIN 6B (LARP6B)","LA RELATED PROTEIN 6B (LARP6B); (ATLARP6B)"]
["AT1G15420","red","Encodes a novel plant specific protein that is co-expressed with components of pre-rRNA processing complex. Co-localizes with NuGWD1 and SWA1.","LANT-SPECIFIC COMPONENT OF THE PRE- RRNA PROCESSING COMPLEX1 (PCP1)","LANT-SPECIFIC COMPONENT OF THE PRE- RRNA PROCESSING COMPLEX1 (PCP1)"]
["AT1G18850","red","PCP2 encodes a novel plant specific protein that is co-expressed with components of pre-rRNA processing complex. Co-localizes with NuGWD1 and SWA1.","LANT-SPECIFIC COMPONENT OF THE PRE- RRNA PROCESSING COMPLEX2 (PCP2)","LANT-SPECIFIC COMPONENT OF THE PRE- RRNA PROCESSING COMPLEX2 (PCP2)"]
["AT5G06760","red","Encodes LEA4-5, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment. Most of the diverse set of LEA proteins can be grouped according to properties such as high hydrophilicity and high content of glycine or other small amino acids in what has been termed hydrophilins. LEA4-5 protects enzyme activities from the adverse effects induced by freeze-thaw cycles in vitro.","LATE EMBRYOGENESIS ABUNDANT 4-5 (LEA4-5)","LATE EMBRYOGENESIS ABUNDANT 4-5 (AtLEA4-5);LATE EMBRYOGENESIS ABUNDANT 4-5 (LEA4-5)"]
["AT2G47780","red","Encodes a small rubber particle protein homolog. Plays dual roles as positive factors for tissue growth and development and in drought stress responses.","LD-ASSOCIATED PROTEIN 2 (LDAP2)","LD-ASSOCIATED PROTEIN 2 (LDAP2);SMALL RUBBER PARTICLE PROTEIN2 (SRP2)"]
["AT3G59820","red","LETM1-like protein;(source:Araport11)","LEUCINE ZIPPER-EF-HAND-CONTAINING TRANSMEMBRANE PROTEIN 1 (LETM1)","LEUCINE ZIPPER-EF-HAND-CONTAINING TRANSMEMBRANE PROTEIN 1 (LETM1); (ATLETM1)"]
["AT3G24090","red","Encodes a glutamine-fructose-6-phosphate transaminase that likely plays a role in UDP-N-acetylglucosamine biosynthesis.","L-GLUTAMINE D-FRUCTOSE-6-PHOSPHATE AMIDOTRANSFERASE (GFAT)","L-GLUTAMINE D-FRUCTOSE-6-PHOSPHATE AMIDOTRANSFERASE (GFAT);GLUTAMINE:FRUCTOSE-6-PHOSPHATE-AMIDOTRANSFERASE 1 (GFAT1)"]
["AT2G04350","red","AMP-dependent synthetase and ligase family protein;(source:Araport11)","LONG-CHAIN ACYL-COA SYNTHETASE 8 (LACS8)","LONG-CHAIN ACYL-COA SYNTHETASE 8 (LACS8)"]
["AT3G46610","red","Chloroplast-localized PPR protein required for the translation of the psbJ and psbN open reading frames. TPJ(2019) shows that LPE1 is not required for psbA translation, in contrast to previous results (PNAS 2018).","LOW PHOTOSYNTHETIC EFFICIENCY 1 (LPE1)","LOW PHOTOSYNTHETIC EFFICIENCY 1 (LPE1)"]
["AT1G02910","red","Mutants defective in this gene were shown to have a reduced PSII content (overall reduction in the levels of several PSII subunits) and a disrupted grana stack structure. The N-terminal half of the protein contains two tetratricopeptide repeat (TPR) motifs that are arranged tandemly, each consisting of a 34-residue degenerate consensus sequence. The N-terminal sequence is rich in positive and hydroxylated amino acid residues.","LOW PSII ACCUMULATION1 (LPA1)","LOW PSII ACCUMULATION1 (LPA1)"]
["AT5G60160","red","Vacuolar aspartyl aminopeptidase which also functions as a molecular chaperone.","M18 ASPARTYL AMINOPEPTIDASE2 (DAP1)","M18 ASPARTYL AMINOPEPTIDASE2 (DAP1)"]
["AT5G03860","red","Encodes a protein with malate synthase activity.","MALATE SYNTHASE (MLS)","MALATE SYNTHASE (MLS)"]
["AT2G01450","red","MPK17 Map kinase family member. Mutants have increased numbers of peroxisomes a phenotype that can be suppressed by mutations in PMD1. This and other treatments, suggests a function in control of peroxisome proliferation in salt stress.","MAP KINASE 17 (MPK17)","MAP KINASE 17 (ATMPK17);MAP KINASE 17 (MPK17)"]
["AT3G18690","red","Encodes a nuclear-localized member of a plant specific gene family involved in mediating responses to pathogens. Interacts with WRKY transcriptional regulators.","MAP KINASE SUBSTRATE 1 (MKS1)","MAP KINASE SUBSTRATE 1 (MKS1)"]
["AT4G01560","red","Ribosomal RNA processing Brix domain protein;(source:Araport11)","MATERNAL EFFECT EMBRYO ARREST 49 (MEE49)","MATERNAL EFFECT EMBRYO ARREST 49 (MEE49)"]
["AT5G12080","red","Encodes a mechanosensitive (or stretch-activated) ion channel in the plasma membrane with a moderate preference for anions.Cell death activity is negatively regulated by phosphorylation while mechanosensitive properties are unaffected.","MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 10 (MSL10)","MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 10 (MSL10); (MSCS-LIKE 10); (ATMSL10)"]
["AT4G28590","red","Encodes a dual-targeted nuclear/plastidial phytochrome signaling component required for PEP assembly. It controls PhAPG expression primarily from the nucleus by interacting with phytochromes and promoting their localization to photobodies for the degradation of the transcriptional regulators PIF1 and PIF3. RCB-dependent PIF degradation in the nucleus signals the plastids for PEP assembly and PhAPG expression.","MESOPHYLL-CELL RNAI LIBRARY LINE 7 (MRL7)","MESOPHYLL-CELL RNAI LIBRARY LINE 7 (MRL7);EARLY CHLOROPLAST BIOGENESIS 1 (ECB1); (ATECB1);SUPPRESSOR OF VARIEGATION 4 (SVR4);PIGMENT DEFECTIVE EMBRYO 333 (PDE333);REGULATOR OF CHLOROPLAST BIOGENESIS (RCB)"]
["AT2G31840","red","Thioredoxin superfamily protein;(source:Araport11)","MESOPHYLL-CELL RNAI LIBRARY LINE 7-LIKE (MRL7-L)","MESOPHYLL-CELL RNAI LIBRARY LINE 7-LIKE (MRL7-L)"]
["AT5G20980","red","Encodes a plastidic methionine synthase, involved in methionine de novo synthesis in the chloroplast","METHIONINE SYNTHASE 3 (MS3)","METHIONINE SYNTHASE 3 (MS3);METHIONINE SYNTHASE 3 (ATMS3)"]
["AT5G19020","red","Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing.","MITOCHONDRIAL EDITING FACTOR 18 (MEF18)","MITOCHONDRIAL EDITING FACTOR 18 (MEF18)"]
["AT3G02330","red","Involved in cytidine to uridine editing of the mitochondrial mRNA AtMg00510.","MITOCHONDRIAL EDITING FACTOR 13 (MEF13)","MITOCHONDRIAL EDITING FACTOR 13 (MEF13)"]
["AT5G23395","red","Encodes Mia40, a component of the mitochondrial intermembrane space assembly machinery involved in the import pathway of the small intermembrane space proteins.","MITOCHONDRIAL INTERMEMBRANE SPACE ASSEMBLY MACHINERY 40 (MIA40)","MITOCHONDRIAL INTERMEMBRANE SPACE ASSEMBLY MACHINERY 40 (MIA40)"]
["AT3G11460","red","Encodes a DYW PPR protein that is involved in editing the mitochondrial NAD2 transcript at the site nad2-842.","MITOCHONDRIAL RNA EDITING FACTOR 10 (MEF10)","MITOCHONDRIAL RNA EDITING FACTOR 10 (MEF10)"]
["AT4G11060","red","Participates in a minimal functioning DNA replisome in plant chloroplasts and mitochondria which consists of the DNA primase-helicase protein Twinkle along with DNA polymerase 1A or 1B. ABA responsive gene involved in mitochondrial RNA processing.","MITOCHONDRIALLY TARGETED SINGLE-STRANDED DNA BINDING PROTEIN (MTSSB)","MITOCHONDRIALLY TARGETED SINGLE-STRANDED DNA BINDING PROTEIN (MTSSB);MITOCHONDRIAL SINGLE-STRANDED BINDING PROTEIN 1 (SBB1)"]
["AT3G50310","red","Encodes a member of MEKK subfamily. Target promoter of the male germline-specific transcription factor DUO1. Involved in osmotic stress response via regulation of MPK6 activity. It also plays an important role in regulating cell division and cell elongation in the primary root meristematic and elongation areas. Mutants show defects in root microtubule organization.It phosphorylates MPK18 and MKK3.It is a positive regulator of ABA-induced stomatal closure that acts by phosphorylating MKK5.","MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 (MAPKKK20)","MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 (MAPKKK20);MAPKK KINASE 20 (MKKK20);ABA-INSENSITIVE PROTEIN KINASE 1 (AIK1)"]
["AT4G04950","red","Encodes a monothiol glutaredoxin that is a critical component involved in ROS accumulation, auxin signaling, and temperature-dependent postembryonic growth in plants. It has been shown to associate with the cytosolic Fe-S assembly (CIA) complex and contributes to, but is not essential for, the correct functioning of client Fe-S proteins in unchallenged conditions.","MONOTHIOL GLUTAREDOXIN 17 (GRXS17)","MONOTHIOL GLUTAREDOXIN 17 (GRXS17);ARABIDOPSIS THALIANA MONOTHIOL GLUTAREDOXIN 17 (AtGRXS17)"]
["AT1G04510","red","Encodes MAC3A, a U-box proteins with homology to the yeast and human E3 ubiquitin ligase Prp19. Associated with the MOS4-Associated Complex (MAC). Involved in plant innate immunity. Regulator of flowering time.","MOS4-ASSOCIATED COMPLEX 3A (MAC3A)","MOS4-ASSOCIATED COMPLEX 3A (MAC3A);PLANT U-BOX 59 (PUB59)"]
["AT1G07360","red","Encodes MAC5A, a component of the MOS4-associated complex (MAC) that contributes to snc1- mediated autoimmunity. MAC is a highly conserved nuclear protein complex associated with the spliceosome. Homologues include AT1G07360 (MAC5A), AT2G29580 (MAC5B) and AT5G07060 (MAC5C).","MOS4-ASSOCIATED COMPLEX SUBUNIT 5A (MAC5A)","MOS4-ASSOCIATED COMPLEX SUBUNIT 5A (MAC5A); (ATC3H4)"]
["AT3G06860","red","Encodes a multifunctional protein. Involved in peroxisomal fatty acid beta oxidation. Loss-of-function mutant lacks hydroxyacyl-CoA dehydrogenase activity and have reduced levels of long-chain enoyl-CoA hydratase activity. The mutant has fewer but larger peroxisomes. The mRNA is cell-to-cell mobile.","MULTIFUNCTIONAL PROTEIN 2 (MFP2)","MULTIFUNCTIONAL PROTEIN 2 (MFP2);MULTIFUNCTIONAL PROTEIN 2 (ATMFP2)"]
["AT2G35240","red","Member of MORF family consisting of of nine full-length proteins encoded in the nuclear genome. MORF proteins are required for all RNA editing events in plastids and for many, possibly also all, sites in mitochondria. Potential link between the RNA binding PPR protein and the protein contributing the enzymatic activity in RNA editing.","MULTIPLE ORGANELLAR RNA EDITING FACTOR 6 (MORF6)","MULTIPLE ORGANELLAR RNA EDITING FACTOR 6 (MORF6)"]
["AT1G11430","red","Encodes a protein involved in RNA editing in chloroplasts. The mRNA is cell-to-cell mobile.","MULTIPLE ORGANELLAR RNA EDITING FACTOR 9 (MORF9)","MULTIPLE ORGANELLAR RNA EDITING FACTOR 9 (MORF9); (ATRIP9); (RIP9)"]
["AT4G37670","red","N-acetyl-l-glutamate synthase 2;(source:Araport11)","N-ACETYL-L-GLUTAMATE SYNTHASE 2 (NAGS2)","N-ACETYL-L-GLUTAMATE SYNTHASE 2 (NAGS2)"]
["AT1G10490","red","Involved in RNA acetylation on N4-cytidine.","N-ACETYLTRANSFERASE1 FOR CYTIDINE IN RNA (ACYR1)","N-ACETYLTRANSFERASE1 FOR CYTIDINE IN RNA (ACYR1); (ATNAT10A);N-ACETYLTRANSFERASE 10A (NAT10A)"]
["AT5G58330","red","lactate/malate dehydrogenase family protein;(source:Araport11)","NADP-DEPENDENT MALATE DEHYDROGENASE (NADP-MDH)","NADP-DEPENDENT MALATE DEHYDROGENASE (NADP-MDH)"]
["AT5G67440","red","A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis.","NAKED PINS IN YUC MUTANTS 3 (NPY3)","NAKED PINS IN YUC MUTANTS 3 (NPY3);MAB4/ENP/NPY1-LIKE 2 (MEL2)"]
["AT5G06980","red","Member of a small gene family. Appears to be clock regulated.Somewhat redundant with LNK1/2 though more like LNK3 in having affects on biomass accumulation and phototrophism.","NIGHT LIGHT-INDUCIBLE AND CLOCK-REGULATED GENE 4 (LNK4)","NIGHT LIGHT-INDUCIBLE AND CLOCK-REGULATED GENE 4 (LNK4)"]
["AT3G44320","red","This enzyme catalyzes the hydrolysis of indole-3-acetonitrile (IAN) to indole-3-acetic acid (IAA) (EC 3.5.5.1) and IAN to indole-3-acetamide (IAM) at lower levels. It is the only one of the four Arabidopsis nitrilases whose mRNA levels are strongly induced when plants experience sulphur deprivation. This enzyme likely participates in other non-auxin-related metabolic pathways.","NITRILASE 3 (NIT3)","NITRILASE 3 (NIT3);NITRILASE 3 (AtNIT3)"]
["AT5G61820","red","P1-interacting host factor required for robust virus infection.","NODULIN 19 (NOD19)","NODULIN 19 (NOD19)"]
["AT3G52140","red","Involved in regulating mitochondrial quality control. Regulates mitochondrial association time and thereby is involved in mitochondrial fusion. Mutants show unregulated autophagy and display transcriptomic markers of mitochondrial stress. Its activity can be modulated by Lys acetylation.","NON RESPONDING TO OXYLIPINS 38 (NOXY38)","NON RESPONDING TO OXYLIPINS 38 (NOXY38);FRIENDLY MITOCHONDRIA (FMT); (FRIENDLY)"]
["AT5G11240","red","GHS40 encodes a WD40 protein, that is localized in the nucleus and nucleolus. In the presence of high glucose it negatively regulates the expression of abscisic acid degradation and signaling genes.","NUCLEAR GLUCOSE-RESPONSIVE WD40 PROTEIN1 (NUGWD1)","NUCLEAR GLUCOSE-RESPONSIVE WD40 PROTEIN1 (NUGWD1); (ATGHS40);GLUCOSE HYPERSENSITIVE 40 (GHS40)"]
["AT5G60040","red","Encodes a subunit of RNA polymerase III (aka RNA polymerase C).","NUCLEAR RNA POLYMERASE C1 (NRPC1)","NUCLEAR RNA POLYMERASE C1 (NRPC1)"]
["AT2G18220","red","Noc2p family;(source:Araport11)","NUCLEOLAR COMPLEX ASSOCIATED 2 (NOC2)","NUCLEOLAR COMPLEX ASSOCIATED 2 (NOC2); (ATNOC2)"]
["AT1G79150","red","binding protein;(source:Araport11)","NUCLEOLAR COMPLEX ASSOCIATED 3 (NOC3)","NUCLEOLAR COMPLEX ASSOCIATED 3 (NOC3); (ATNOC3)"]
["AT5G04600","red","RNA binding protein with RNA chaperone&#8208;like activity. Binds internal transcribed sequence2.","NUCLEOLAR RNA CHAPERONE-LIKE 1 (NURC1)","NUCLEOLAR RNA CHAPERONE-LIKE 1 (NURC1)"]
["AT1G48920","red","Encodes ATNUC-L1 (NUCLEOLIN LIKE 1), the predominant form of the two nucleolin proteins found in Arabidopsis. This protein is involved in rRNA processing, ribosome biosynthesis, and vascular pattern formation. PARL1 localizes to the nucleolus and parl1 mutants accumulate elevated levels of the unspliced 35S pre-rRNA. parl1 mutants also have defects in cotyledon, leaf, sepal, and petal vein patterning and have reduced stature, reduced fertility, increased bushiness, and reduced root length. The sugar-induced expression of ribosome proteins is also reduced in parl1 mutants. The mRNA is cell-to-cell mobile.","NUCLEOLIN LIKE 1 (NUC-L1)","NUCLEOLIN LIKE 1 (ATNUC-L1);PARALLEL 1 (PARL1);NUCLEOLIN LIKE 1 (NUC-L1);NUCLEOLIN 1 (NUC1)"]
["AT4G26110","red","Encodes a member of a small gene family of proteins with similarity to nucleosome assembly proteins.May function in nucleotide excision repair. Loss of function mutations have no obvious visible phenotypes but do seem to affect transcription of NER related genes. The mRNA is cell-to-cell mobile. Plants mutated in three ubiquitously expressed NAP1 genes (NAP1;1~NAP1;3) and organ-specifically expressed NAP1;4 gene show hypersensitivity to genotoxic stresses including UV and DSB-inducing agent Bleomycin. The NAP1 genes act synergistically with NRP genes in promoting somatic homologous recombination.","NUCLEOSOME ASSEMBLY PROTEIN1;1 (NAP1;1)","NUCLEOSOME ASSEMBLY PROTEIN1;1 (NAP1;1);ARABIDOPSIS THALIANA NUCLEOSOME ASSEMLY PROTEIN 1;1 (ATNAP1;1)"]
["AT2G19480","red","This gene is predicted to encode a nucleosome assembly protein. Plant lines expressing an RNAi construct directed against this gene show a reduction in agrobacterium-mediated root transformation. The mRNA is cell-to-cell mobile. Plants mutated in three ubiquitously expressed NAP1 genes (NAP1;1~NAP1;3) and organ-specifically expressed NAP1;4 gene show hypersensitivity to genotoxic stresses including UV and DSB-inducing agent Bleomycin. The NAP1 genes act synergistically with NRP genes in promoting somatic homologous recombination.","NUCLEOSOME ASSEMBLY PROTEIN 1;2 (NAP1;2)","NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A 02 (NFA02);NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A 2 (NFA2);NUCLEOSOME ASSEMBLY PROTEIN 1;2 (NAP1;2)"]
["AT4G35050","red","Encodes a WD-40 repeat protein similar to yeast MSI1. The predicted protein has a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase","MULTICOPY SUPPRESSOR OF IRA1 3 (MSI3)","NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP C 3 (NFC3)"]
["AT3G07050","red","Arabidopsis NSN1 encodes a nucleolar GTP- binding protein and is required for maintenance of inflorescence meristem identity, floral organ development and megaspore mother cell specification. Functions downstream of BZR1 family transcription factors to restrict MMC specification to a single cell.","NUCLEOSTEMIN-LIKE 1 (NSN1)","NUCLEOSTEMIN-LIKE 1 (NSN1)"]
["AT5G10030","red","Encodes a member of basic leucine zipper transcription gene family. Nomenclature according to Xiang, et al. (1997).","TGACG MOTIF-BINDING FACTOR 4 (TGA4)","OCS ELEMENT BINDING FACTOR 4 (OBF4);TGACG MOTIF-BINDING FACTOR 4 (TGA4)"]
["AT5G55920","red","Encodes a homolog of the S. cerevisiae Nop2 that is involved in ribosome biogenesis and plays a role on organ size control by promoting cell proliferation and preventing compensation in normal leaf development.","OLIGOCELLULA 2 (OLI2)","OLIGOCELLULA 2 (OLI2); (ATTRM4C);TRNA METHYLTRANSFERASE 4C (TRM4C); (NOP2A)"]
["AT3G61990","red","Encodes a protein methyltransferase. Involved in the methylation of plant transmembrane proteins.","O-MTASE FAMILY 3 PROTEIN (OMTF3)","O-MTASE FAMILY 3 PROTEIN (OMTF3)"]
["AT3G13880","red","Encodes a pentatricopeptide repeat (PPR) protein involved in RNA editing in mitochondria.","ORGANELLE TRANSCRIPT PROCESSING 72 (OTP72)","ORGANELLE TRANSCRIPT PROCESSING 72 (OTP72)"]
["AT2G29760","red","Encodes a chloroplast RNA editing factor.","ORGANELLE TRANSCRIPT PROCESSING 81 (OTP81)","ORGANELLE TRANSCRIPT PROCESSING 81 (OTP81); (QED1)"]
["AT5G46180","red","Encodes an ornithine delta-aminotransferase that is transcriptionally up-regulated in young seedlings and in response to salt stress. It is unlikely to play a role in salt-stress-induced proline accumulation, however, it appears to participate in arginine and ornithine catabolism.","ORNITHINE-DELTA-AMINOTRANSFERASE (DELTA-OAT)","ORNITHINE-DELTA-AMINOTRANSFERASE (DELTA-OAT)"]
["AT2G20330","red","DDB1-CUL4 ASSOCIATED FACTOR (DCAF) protein.","OVERLY ZINC SENSITIVE3 (OZS3)","OVERLY ZINC SENSITIVE3 (OZS3)"]
["AT4G24520","red","Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism.","P450 REDUCTASE 1 (ATR1)","P450 REDUCTASE 1 (ATR1);ARABIDOPSIS CYTOCHROME REDUCTASE (AR1);ARABIDOPSIS THALIANA CYTOCHROME REDUCTASE 1 (ATCPR1)"]
["AT2G48120","red","The pale cress (pac) mutant affects chloroplast and leaf development; mutants are ABA-deficient and accumulate lower levels of carotenoids and chlorophyll compared to wild type. PAC binds 23srRNA and appears to be required for 50s ribosome assembly. Three alternative transcripts of this gene exist.PAC is essential for photoautotrophic growth and associates with psbK-psbI, ndhF, ndhD, and 23S ribosomal RNA in vivo(PMID:28805278)","PALE CRESS (PAC)","PALE CRESS (PAC)"]
["AT5G52780","red","Chloroplast NAD(P)H dehydrogenase complex assembly factor.","PAM68-LIKE (PAM68L)","PAM68-LIKE (PAM68L)"]
["AT3G09830","red","Encodes a member of subfamily VIIa of the receptor-like cytoplasmic kinases (RLCKs). It contributes to pattern-triggered immunity in response to P. syringae.","PATTERN-TRIGGERED IMMUNITY (PTI) COMPROMISED RECEPTOR-LIKE CYTOPLASMIC KINASE 1 (PCRK1)","PATTERN-TRIGGERED IMMUNITY (PTI) COMPROMISED RECEPTOR-LIKE CYTOPLASMIC KINASE 1 (PCRK1);PBS1-LIKE 39 (PBL39)"]
["AT1G80270","red","PENTATRICOPEPTIDE REPEAT 596;(source:Araport11)","PENTATRICOPEPTIDE REPEAT 596 (PPR596)","PENTATRICOPEPTIDE REPEAT 596 (PPR596)"]
["AT3G59040","red","Involved in chloroplast biogenesis and function.","PENTATRICOPEPTIDE REPEAT PROTEIN 287 (PPR287)","PENTATRICOPEPTIDE REPEAT PROTEIN 287 (PPR287)"]
["AT1G56570","red","Encodes a mitochondria-localized E+-type pentatricopeptide repeat protein involved in C to U editing in mitochondria and chloroplasts. Functions in defense against necrotrophic fungi and abiotic stress tolerance.","PENTATRICOPEPTIDE REPEAT PROTEIN FOR GERMINATION ON NACL (PGN)","PENTATRICOPEPTIDE REPEAT PROTEIN FOR GERMINATION ON NACL (PGN)"]
["AT1G15390","red","encodes a peptide deformylase-like protein. Removes N-formyl groups, a prerequisite for the action of methionine aminopeptidase during protein synthesis. Targeted to mitochondria. Requires Zn for catalysis.","PEPTIDE DEFORMYLASE 1A (PDF1A)","PEPTIDE DEFORMYLASE 1A (PDF1A); (ATDEF1)"]
["AT1G15440","red","Encodes a nucleolar protein that is a ribosome biogenesis co-factor. Mutants display aberrant RNA processing and female gametophyte development.","PERIODIC TRYPTOPHAN PROTEIN 2 (PWP2)","PERIODIC TRYPTOPHAN PROTEIN 2 (PWP2);PERIODIC TRYPTOPHAN PROTEIN 2 (ATPWP2)"]
["AT1G06530","red","Encodes PEROXISOMAL AND MITOCHONDRIAL DIVISION FACTOR2. Involved in mitochondrial morphogenesis.","PEROXISOMAL AND MITOCHONDRIAL DIVISION FACTOR 2 (PMD2)","PEROXISOMAL AND MITOCHONDRIAL DIVISION FACTOR 2 (PMD2)"]
["AT2G22780","red","encodes an peroxisomal NAD-malate dehydrogenase that is involved in fatty acid beta-oxidation through providing NAD to the process of converting fatty acyl CoA to acetyl CoA.","PEROXISOMAL NAD-MALATE DEHYDROGENASE 1 (PMDH1)","PEROXISOMAL NAD-MALATE DEHYDROGENASE 1 (PMDH1)"]
["AT5G39050","red","Encodes a malonyltransferase that may play a role in phenolic xenobiotic detoxification.","PHENOLIC GLUCOSIDE MALONYLTRANSFERASE 1 (PMAT1)","PHENOLIC GLUCOSIDE MALONYLTRANSFERASE 1 (PMAT1)"]
["AT4G37870","red","Encodes a phosphoenolpyruvate carboxykinase that localizes to the cytosol.","PHOSPHOENOLPYRUVATE CARBOXYKINASE 1 (PCK1)","PHOSPHOENOLPYRUVATE CARBOXYKINASE 1 (PCK1);PHOSPHOENOLPYRUVATE CARBOXYKINASE (PEPCK)"]
["AT1G62390","red","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","PHOX2 (Phox2)","PHOX2 (Phox2);CLUMPED CHLOROPLASTS 1 (CLMP1)"]
["AT3G55340","red","Plant-specific protein. Interacts with phragmoplastin, Rop1 and Rop2. Involved in cell plate formation.","PHRAGMOPLASTIN INTERACTING PROTEIN 1 (PHIP1)","PHRAGMOPLASTIN INTERACTING PROTEIN 1 (PHIP1)"]
["AT2G01490","red","Encodes a phytanoyl-CoA 2-hydroxylase (PAHX). The mRNA is cell-to-cell mobile.","PHYTANOYL-COA 2-HYDROXYLASE (PAHX)","PHYTANOYL-COA 2-HYDROXYLASE (PAHX)"]
["AT2G24120","red","Plastid RNA polymerase which expression is regulated by GLRs family transcription factors in a cytokinin-dependent manner during deetiolation.","SCABRA 3 (SCA3)","PIGMENT DEFECTIVE 319 (PDE319);SCABRA 3 (SCA3)"]
["AT5G08610","red","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","PIGMENT DEFECTIVE 340 (PDE340)","PIGMENT DEFECTIVE 340 (PDE340)"]
["AT5G16620","red","chloroplast protein import (Tic40)","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 40 (TIC40)","PIGMENT DEFECTIVE EMBRYO 120 (PDE120);TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 40 (ATTIC40);TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 40 (TIC40)"]
["AT2G17500","red","Intracellular auxin transport facilitator at the endoplasmic reticulum. Auxin transport facilitator which abundance is controlled by ER stress, resulting in protein turnover in a tissue-dependent manner. This process allows for the integration of environmental input with phytochrome auxin signaling, contributing to stress-induced growth adaptation.","PIN-LIKES 5 (PILS5)","PIN-LIKES 5 (PILS5)"]
["AT1G14870","red","PCR2 encodes a membrane protein involved in zinc transport and detoxification.","PLANT CADMIUM RESISTANCE 2 (PCR2)","PLANT CADMIUM RESISTANCE 2 (PCR2); (AtPCR2)"]
["AT3G48500","red","PEP complex component.","PIGMENT DEFECTIVE 312 (PDE312)","PLASTID TRANSCRIPTIONALLY ACTIVE 10 (PTAC10);PIGMENT DEFECTIVE 312 (PDE312); (TAC10)"]
["AT1G21600","red","Present in transcriptionally active plastid chromosomes. Involved in plastid gene expression. essential subunit of the plastid-encoded RNA polymerase (PEP). Mediates phytochrome signaling.","PLASTID TRANSCRIPTIONALLY ACTIVE 6 (PTAC6)","PLASTID TRANSCRIPTIONALLY ACTIVE 6 (PTAC6);PEP-ASSOCIATED PROTEIN 8 (PAP8)"]
["AT4G15900","red","Mutations confer hypersensitivity to glucose and sucrose and augments sensitivity to cytokinin, ethylene, ABA and auxin. Encodes a nuclear WD40 protein that is imported into the nucleus. Essential for plant innate immunity. Interacts with MOS4 and AtCDC5. It is also predicted to have two DWD motifs. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase, and may affect the stability of AKIN10.","PLEIOTROPIC REGULATORY LOCUS 1 (PRL1)","PLEIOTROPIC REGULATORY LOCUS 1 (PRL1);SUPPRESSOR OF CPR5 44 (SCPR44)"]
["AT5G06860","red","Encodes a polygalacturonase inhibiting protein involved in defense response. PGIPs inhibit the function of cell wall pectin degrading enzymes such as those produced by fungal pathogens. PGIP1 is induced by fungal infection. Suppressed in the proton sensitive stop1-mutant, but the transcription level was recovered by transformation of STOP2. Knockout mutant showed severe damage in the root tip in low Ca and low pH medium.","POLYGALACTURONASE INHIBITING PROTEIN 1 (PGIP1)","POLYGALACTURONASE INHIBITING PROTEIN 1 (ATPGIP1);POLYGALACTURONASE INHIBITING PROTEIN 1 (PGIP1)"]
["AT1G02050","red","Chalcone and stilbene synthase family protein;(source:Araport11)","LESS ADHESIVE POLLEN 6 (LAP6)","POLYKETIDE SYNTHASE A (PKSA);LESS ADHESIVE POLLEN 6 (LAP6)"]
["AT1G15480","red","PPR motif containing protein. Found in mitochondria. Mutants flower early and have reduced levels of the ABI5, a regulator of FLC expression.","PRECOCIOUS1 (POCO1)","PRECOCIOUS1 (POCO1)"]
["AT1G04870","red","Encodes a type I protein arginine methyltransferase based on the At1g04870.2 gene model. PRMT10 can catalyze the asymmetric dimethylation of arginine 3 on histone 4 and can also methylate myelin basic protein in vitro. Mutants lacking PRMT10 flower late due to defects in the autonomous pathway and they have elevated levels of FLC transcripts.","PROTEIN ARGININE METHYLTRANSFERASE 10 (PRMT10)","PROTEIN ARGININE METHYLTRANSFERASE 10 (PRMT10); (ATPRMT10)"]
["AT3G12270","red","protein arginine methyltransferase 3;(source:Araport11)","PROTEIN ARGININE METHYLTRANSFERASE 3 (PRMT3)","PROTEIN ARGININE METHYLTRANSFERASE 3 (PRMT3);ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 3 (ATPRMT3)"]
["AT1G71140","red","MATE transporter that can export the antibiotic norfloxacin.","PROTEIN DETOXIFICATION 14 (DTX14)","PROTEIN DETOXIFICATION 14 (DTX14)"]
["AT2G16650","red","Encodes a proteinaceous RNase P that supports RNase P activity in vivo in both organelles and the nucleus. It is also involved in the maturation of small nucleolar RNA (snoRNA) and mRNA.","PROTEINACEOUS RNASE P 2 (PRORP2)","PROTEINACEOUS RNASE P 2 (PRORP2)"]
["AT4G31850","red","Encodes a protein containing 27 pentatrico-peptide repeat (PPR) motifs. Functions in the stabilization of petL operon RNA and also in the translation of petL.","PROTON GRADIENT REGULATION 3 (PGR3)","PROTON GRADIENT REGULATION 3 (PGR3)"]
["AT1G49350","red","Pseudouridine kinase that catalyzes first step in pseudouridine degradation. Acts together with PUMY in the peroxisome to prevent toxic pseudouridine monophosphate accumulation.","PSEUDORURIDINE KINASE (PUKI)","PSEUDORURIDINE KINASE (PUKI)"]
["AT2G29190","red","Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.","PUMILIO 2 (PUM2)","PUMILIO 2 (PUM2);PUMILIO 2 (APUM2)"]
["AT1G72320","red","Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.","PUMILIO 23 (PUM23)","PUMILIO 23 (PUM23);PUMILIO 23 (APUM23)"]
["AT3G22310","red","Sequence similarity ot DEAD-box RNA helicases. Binds RNA and DNA. Involved in drought, salt and cold stress responses. The mRNA is cell-to-cell mobile.","PUTATIVE MITOCHONDRIAL RNA HELICASE 1 (PMH1)","PUTATIVE MITOCHONDRIAL RNA HELICASE 1 (PMH1);RNA HELICASE 9 (ATRH9)"]
["AT2G38210","red","putative PDX1-like protein 4;(source:Araport11)","PUTATIVE PDX1-LIKE PROTEIN 4 (PDX1L4)","PUTATIVE PDX1-LIKE PROTEIN 4 (PDX1L4)"]
["AT1G71720","red","Encodes a chloroplast localized protein that regulates the translation of Ycf1 by binding to its mRNA. It is involved in the biogenesis of photosynthetic complexes.","PIGMENT DEFECTIVE 338 (PDE338)","RBCL MRNA S1 BINDING DOMAIN PROTEIN (RLSB);PHOTOSYSTEM BIOGENESIS REGULATOR 1 (PBR1);PETB/PETD STABILIZING FACTOR (BSF);PIGMENT DEFECTIVE 338 (PDE338)"]
["AT1G75120","red","Encodes an arabinosyltransferase that modifies extensin proteins in root hair cells.","REDUCED RESIDUAL ARABINOSE 1 (RRA1)","REDUCED RESIDUAL ARABINOSE 1 (RRA1)"]
["AT3G17170","red","Translation elongation factor EF1B/ribosomal protein S6 family protein;(source:Araport11)","REGULATOR OF FATTY-ACID COMPOSITION 3 (RFC3)","REGULATOR OF FATTY-ACID COMPOSITION 3 (RFC3)"]
["AT1G63160","red","replication factor C 2;(source:Araport11)","REPLICATION FACTOR C 2 (RFC2)","REPLICATION FACTOR C 2 (RFC2);EMBRYO DEFECTIVE 2811 (EMB2811)"]
["AT1G20620","red","Catalase, catalyzes the breakdown of hydrogen peroxide (H2O2) into water and oxygen.The mRNA is cell-to-cell mobile.It is a target for SUMOlaytion (PMID: 21413927).Transnitrosylates GSNOR1 and mutants suppress the gnsnor1 phenotype.","REPRESSOR OF GSNOR1 (ROG1)","REPRESSOR OF GSNOR1 (ROG1)"]
["AT2G44270","red","Encodes ROL5, a repressor of lrx1 mutants that develop aberrant root hairs. ROL5 is a homolog of yeast Ncs6p that affects TOR signaling. The target of rapamycin (TOR) pathway is a major regulator of cell growth in eukaryotes, and inhibition of this pathway by rapamycin reduces cell growth. ROL5 might function as a mitochondrial component of the TOR pathway that influences the plant's response to ROS (reactive oxygen species).","REPRESSOR OF LRX1 (ROL5)","REPRESSOR OF LRX1 (ROL5)"]
["AT5G67630","red","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","REPTIN, RVB2, RUVBL2, TIP49B (ISE4)","REPTIN, RVB2, RUVBL2, TIP49B (ISE4)"]
["AT5G45250","red","RPS4 belongs to the Toll/interleukin-1 receptor (TIR)-nucleotide binding site (NBS)-Leu-rich repeat (LRR) class of disease resistance (R ) genes. Confers specific resistance to Pseudomonas syringae pv. tomato carrying the avirulence gene AvrRPS4. Produces alternative transcripts with truncated open reading frames.","RESISTANT TO P. SYRINGAE 4 (RPS4)","RESISTANT TO P. SYRINGAE 4 (RPS4)"]
["AT4G09730","red","Encodes RH39, a DEAD-box protein involved in the introduction of the hidden break into the 23S rRNA in the chloroplasts. Recombinant RH39 binds to the 23S rRNA in a segment adjacent to the stem-loop creating the hidden break target loop in a sequence-dependent manner. Has ATP-hydrolyzing activity at a Kcat of 5.3 /min in the presence of rRNA sequence. Mutants have drastically reduced level of level of ribulose 1,5-bisphosphate carboxylase/oxygenase. The mRNA is cell-to-cell mobile.","RH39 (RH39)","RH39 (RH39)"]
["AT3G09970","red","Encodes a cytosolic tyrosine phosphatase.","RHIZOBIALE-LIKE PHOSPHATASE 2 (RLPH2)","RHIZOBIALE-LIKE PHOSPHATASE 2 (RLPH2)"]
["AT1G70190","red","ribosomal protein L7/L12 domain-containing protein;(source:Araport11)","RIBOSOMAL PROTEIN BL12MZ (BL12MZ)","RIBOSOMAL PROTEIN BL12MZ (BL12MZ)"]
["AT5G66860","red","Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein;(source:Araport11)","RIBOSOMAL PROTEIN BL25MY (BL25MY)","RIBOSOMAL PROTEIN BL25MY (BL25MY)"]
["AT4G31460","red","Ribosomal L28 family;(source:Araport11)","RIBOSOMAL PROTEIN BL28M (BL28M)","RIBOSOMAL PROTEIN BL28M (BL28M)"]
["AT5G04800","red","Ribosomal S17 family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES17W (ES17W)","RIBOSOMAL PROTEIN ES17W (ES17W)"]
["AT2G44860","red","cytosolic ribosomal protein gene, part of eL24 family","RIBOSOMAL PROTEIN L24C (RPL24C)","RIBOSOMAL PROTEIN L24C (RPL24C);RIBOSOMAL PROTEIN EL24X (EL24X)"]
["AT3G17465","red","encodes a putative L3 ribosomal protein targeted to the plastid.","RIBOSOMAL PROTEIN L3 PLASTID (RPL3P)","RIBOSOMAL PROTEIN L3 PLASTID (RPL3P);RIBOSOMAL PROTEIN UL3M (UL3M)"]
["AT5G49210","red","stress response NST1-like protein;(source:Araport11)","RIBOSOMAL PROTEIN MRPX (MRPX)","RIBOSOMAL PROTEIN MRPX (MRPX)"]
["AT5G52370","red","28S ribosomal S34 protein;(source:Araport11)","RIBOSOMAL PROTEIN MS34 (MS34)","RIBOSOMAL PROTEIN MS34 (MS34)"]
["AT2G42710","red","Ribosomal protein L1p/L10e family;(source:Araport11)","RIBOSOMAL PROTEIN UL1M (UL1M)","RIBOSOMAL PROTEIN UL1M (UL1M)"]
["AT1G07830","red","ribosomal protein L29 family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL29M (UL29M)","RIBOSOMAL PROTEIN UL29M (UL29M)"]
["AT1G80750","red","Cytosolic ribosomal 60S subunit protein.","(RPL7A)","RIBOSOMAL PROTEIN UL30Z (UL30Z); (RPL7A)"]
["AT4G11360","red","Encodes a putative RING-H2 finger protein RHA1b. The mRNA is cell-to-cell mobile.","RING-H2 FINGER A1B (RHA1B)","RING-H2 FINGER A1B (RHA1B)"]
["AT4G15850","red","plant DEAD box-like RNA helicase.","RNA HELICASE 1 (RH1)","RNA HELICASE 1 (ATRH1);RNA HELICASE 1 (RH1)"]
["AT2G40700","red","DEAD-box helicase family protein. Overexpression confers tolerance to salt stress.","RNA HELICASE 17 (RH17)","RNA HELICASE 17 (RH17)"]
["AT5G08620","red","Similar in sequence to DEAD-box RNA helicases. Binds RNA. Involved in drought, salt and cold stress responses.","STRESS RESPONSE SUPPRESSOR 2 (STRS2)","RNA HELICASE 25 (ATRH25);STRESS RESPONSE SUPPRESSOR 2 (STRS2)"]
["AT1G16280","red","Encodes a putative DEAD-box RNA helicase. Essential for female gametogenesis.","RNA HELICASE 36 (RH36)","RNA HELICASE 36 (RH36);ARABIDOPSIS THALIANA RNA HELICASE 36 (AtRH36);SLOW WALKER 3 (SWA3)"]
["AT3G09720","red","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","RNA HELICASE 57 (RH57)","RNA HELICASE 57 (RH57); (ATRH57)"]
["AT5G60990","red","DEA(D/H)-box RNA helicase family protein;(source:Araport11)","RNA HELICASE10 (RH10)","RNA HELICASE10 (RH10)"]
["AT2G30280","red","Encodes RDM4, a transcriptional regulator functioning in RNA-directed DNA methylation and plant development.","RNA-DIRECTED DNA METHYLATION 4 (RDM4)","RNA-DIRECTED DNA METHYLATION 4 (RDM4);DEFECTIVE IN MERISTEM SILENCING 4 (DMS4)"]
["AT3G25910","red","C2H2-type zinc finger protein involved in salt tolerance. Induced by salt stress.","SALT INDUCED ZINC FINGER PROTEIN1 (SIZ1)","SALT INDUCED ZINC FINGER PROTEIN1 (SIZ1)"]
["AT1G27060","red","Regulator of chromosome condensation (RCC1) family protein;(source:Araport11)","SENSITIVE TO ABA 1 (SAB1)","SENSITIVE TO ABA 1 (SAB1)"]
["AT4G32520","red","Encodes a serine hydroxymethyltransferase SHMT3 located in the plastid.","SERINE HYDROXYMETHYLTRANSFERASE 3 (SHM3)","SERINE HYDROXYMETHYLTRANSFERASE 3 (SHM3);SERINE HYDROXYMETHYLTRANSFERASE 3 (AtSHMT3)"]
["AT5G22840","red","Protein kinase superfamily protein;(source:Araport11)","SERINE/ARGININE PROTEIN KINASE 3 (SRPK3)","SERINE/ARGININE PROTEIN KINASE 3 (SRPK3)"]
["AT4G31120","red","Involved in vernalization. Required for epigenetic silencing of FLC, and for vernalization-mediated histone modification.","SHK1 BINDING PROTEIN 1 (SKB1)","SHK1 BINDING PROTEIN 1 (SKB1);PROTEIN ARGININE METHYLTRANSFERASE 5 (PRMT5); (AtPMRT5);CALCIUM UNDERACCUMULATION 1 (CAU1)"]
["AT2G41670","red","Encodes SIN2 (SHORT INTEGUMENTS 2), a mitochondrial DAR GTPase. SIN2 is hypothesized to function in mitochondrial ribosome assembly. sin2 mutants produce ovules with short integuments due to early cessation of cell division in these structures.","SHORT INTEGUMENT 2 (SIN2)","SHORT INTEGUMENT 2 (SIN2); (SIN2)"]
["AT3G03060","red","Homologue of animal ATPase Family AAA Domain-Containing Protein 3 (ATAD3), which is involved in mitochondrial nucleoid organization; interacts with SHOT1.","SHOT1 BINDING ATPASE 1 (SBA1)","SHOT1 BINDING ATPASE 1 (SBA1);ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 3A1 (ATAD3A1)"]
["AT5G57900","red","F-box protein, interacts with SKP1/ASK1 subunit of SCF ubiquitin ligase in a glucose-dependent manner","SKP1 INTERACTING PARTNER 1 (SKIP1)","SKP1 INTERACTING PARTNER 1 (SKIP1)"]
["AT2G47990","red","Encodes a transducin family nucleolar protein with six WD40 repeats that is most likely involved in 18S rRNA biogenesis. The slow progression of the gametophytic division cycles in swa1 suggested that the SWA1 protein is required for the normal progression of mitotic division cycles through the regulation of cell metabolism. Ubiquitously expressed throughout the plant.","SLOW WALKER1 (SWA1)","SLOW WALKER1 (SWA1);EMBRYO SAC DEVELOPMENT ARREST 13 (EDA13);EMBRYO SAC DEVELOPMENT ARREST 19 (EDA19)"]
["AT1G72440","red","Encodes SLOW WALKER2 (SWA2), a NOC1/Mak21 homologue. Essential for coordinated cell cycle progression during female gametophyte development.","EMBRYO SAC DEVELOPMENT ARREST 25 (EDA25)","SLOW WALKER2 (SWA2);EMBRYO SAC DEVELOPMENT ARREST 25 (EDA25)"]
["AT2G40430","red","Encodes a homolog of yeast NOP53 that is an important regulator of cell division during organ growth.","SMALL ORGAN 4 (SMO4)","SMALL ORGAN 4 (SMO4)"]
["AT2G33730","red","Homolog of the DEADbox pre-mRNA splicing factor Prp28 which regulates abundance of miRNA. It plays essential roles in miRNA biogenesis and interacts with the DCL1 complex and positively influences pri-miRNA processing. SMA1 binds the promoter region of genes encoding pri-miRNAs (MIRs) and is required for MIR transcription. It enhances the abundance of the DCL1 protein levels through promoting the splicing of the DCL1 pre-mRNAs.","SMALL1 (SMA1)","SMALL1 (SMA1)"]
["AT1G76860","red","Small nuclear ribonucleoprotein family protein;(source:Araport11)","SM-LIKE 3B (LSM3B)","SM-LIKE 3B (LSM3B)"]
["AT5G42890","red","sterol carrier protein 2;(source:Araport11)","STEROL CARRIER PROTEIN 2 (SCP2)","STEROL CARRIER PROTEIN 2 (SCP2);STEROL CARRIER PROTEIN 2 (ATSCP2)"]
["AT5G42390","red","Encodes a chloroplast-localized metalloprotease that is essential for embryo development. Mutants do not progress normally beyond the 16-cell stage. The mRNA is cell-to-cell mobile.","STROMAL PROCESSING PEPTIDASE (SPP)","STROMAL PROCESSING PEPTIDASE (SPP)"]
["AT5G06820","red","STRUBBELIG-receptor family 2;(source:Araport11)","STRUBBELIG-RECEPTOR FAMILY 2 (SRF2)","STRUBBELIG-RECEPTOR FAMILY 2 (SRF2)"]
["AT3G13065","red","STRUBBELIG-receptor family 4;(source:Araport11)","STRUBBELIG-RECEPTOR FAMILY 4 (SRF4)","STRUBBELIG-RECEPTOR FAMILY 4 (SRF4)"]
["AT5G66880","red","encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Enzyme involved in the ABA signaling during seed germination, dormancy and seedling growth. The mRNA is cell-to-cell mobile.","SUCROSE NONFERMENTING 1(SNF1)-RELATED PROTEIN KINASE 2.3 (SNRK2.3)","SUCROSE NONFERMENTING 1 (SNF1)-RELATED PROTEIN KINASE 2-3 (SNRK2-3); (SRK2I);SUCROSE NONFERMENTING 1(SNF1)-RELATED PROTEIN KINASE 2.3 (SNRK2.3)"]
["AT3G57140","red","sugar-dependent 1-like protein;(source:Araport11)","SUGAR-DEPENDENT 1-LIKE (SDP1-LIKE)","SUGAR-DEPENDENT 1-LIKE (SDP1-LIKE)"]
["AT5G04040","red","Encodes a triacylglycerol lipase that is involved in storage lipid breakdown during seed germination. The mutant plant exhibits a much slower rate of postgerminative growth than the wild type.","SUGAR-DEPENDENT1 (SDP1)","SUGAR-DEPENDENT1 (SDP1)"]
["AT5G01220","red","Encodes a UDP-sulfoquinovose:DAG sulfoquinovosyltransferase that is involved in sulfolipid biosynthesis and whose expression is responsive to both phosphate (Pi) and phosphite (Phi) in both roots and shoots.","SULFOQUINOVOSYLDIACYLGLYCEROL 2 (SQD2)","SULFOQUINOVOSYLDIACYLGLYCEROL 2 (SQD2)"]
["AT1G33410","red","Encodes a nucleoporin that regulates CONSTANS (CO) protein stability through affecting nuclear pore complex localization of an E3-ubiquitin ligase, HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENES1 (HOS1), which destabilizes CO protein in the morning period.","SUPPRESSOR OF AUXIN RESISTANCE1 (SAR1)","SUPPRESSOR OF AUXIN RESISTANCE1 (SAR1)"]
["AT2G39140","red","Suppressor of var2 variegation phenotype. Chloroplast localized. Loss of function mutant has defects in chloroplast protein translation and rRNA processing. Similar in sequence to pseudouridine synthase proteins.","SUPPRESSOR OF VARIEGATION 1 (SVR1)","SUPPRESSOR OF VARIEGATION 1 (SVR1);PIGMENT DEFECTIVE 328 (PDE328); (RSUA1)"]
["AT1G77920","red","TGA7 belongs to group D of the basic leucine zipper (bZIP) transcription factors. During systemic acquired resistance (SAR), TGA7 binds to the activation sequence-1 (as-1) in the promoter region of SAR related genes and regulates their expressions in an NPR1 dependent manner.","TGACG SEQUENCE-SPECIFIC BINDING PROTEIN 7 (TGA7)","TGACG SEQUENCE-SPECIFIC BINDING PROTEIN 7 (TGA7)"]
["AT3G55160","red","THADA is an orphan gene in Arabidopsis thaliana. It is the only DUF2428 domain containing protein in the genome.","THYROID ADENOMA ASSOCIATED (THADA)","THYROID ADENOMA ASSOCIATED (THADA)"]
["AT1G17530","red","Encodes a translocase of inner mitochondrial membrane.","TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 23 (TIM23-1)","TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 23 (ATTIM23-1);TRANSLOCASE OF INNER MITOCHONDRIAL MEMBRANE 23 (TIM23-1)"]
["AT3G20000","red","Encodes a component of the TOM receptor complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins. With TOM22, functions as the transit peptide receptor at the surface of the mitochondrial outer membrane and facilitates the movement of preproteins into the translocation pore. The mRNA is cell-to-cell mobile.","TRANSLOCASE OF THE OUTER MITOCHONDRIAL MEMBRANE 40 (TOM40)","TRANSLOCASE OF THE OUTER MITOCHONDRIAL MEMBRANE 40 (TOM40)"]
["AT3G23710","red","Tic22-like family protein;(source:Araport11)","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 22-III (Tic22-III)","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 22-III (Tic22-III);TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 22-III (AtTic22-III)"]
["AT4G33350","red","Tic22-like family protein;(source:Araport11)","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 22-IV (Tic22-IV)","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 22-IV (Tic22-IV);TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 22-IV (AtTic22-IV)"]
["AT3G17970","red","Integral chloroplast outer membrane protein. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-III (TOC64-III)","TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-III (atToc64-III);TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-III (TOC64-III)"]
["AT3G51790","red","Encodes a heme-binding protein located in the mitochondrial inner membrane that is involved in cytochrome c maturation.","TRANSMEMBRANE PROTEIN G1P-RELATED 1 (G1)","TRANSMEMBRANE PROTEIN G1P-RELATED 1 (ATG1);TRANSMEMBRANE PROTEIN G1P-RELATED 1 (G1);A. THALIANA HOMOLOG OF E. COLI CCME (ATCCME)"]
["AT5G53770","red","Nucleotidyltransferase family protein;(source:Araport11)","TRF4/5-LIKE (TRL)","TRF4/5-LIKE (TRL)"]
["AT1G45231","red","Encodes a trimethylguanosine synthase that is required for chilling tolerance. tgs1 mutant have a striking chilling sensitive phenotype in which leaf and flower development are dramatically disrupted after long-term chilling treatment.","TRIMETHYLGUANOSINE SYNTHASE 1 (TGS1)","TRIMETHYLGUANOSINE SYNTHASE 1 (TGS1)"]
["AT3G49560","red","HP30/Tric1 is a component of the mitochondrial protein translocation complex and is involved in tRNA transport along with HP30-2/Tric2. Role in protein import into chloroplasts.","HYPOTHETICAL PROTEIN 30 (HP30)","TRNA IMPORT COMPONENT 1 (Tric1);HYPOTHETICAL PROTEIN 30 (HP30)"]
["AT3G21300","red","Encodes a tRNA-specific methyltransferase that together with TRM2B is one of two main writer enzymes for m5U.","TRNA METHYLTRANSFERASE 2A (TRM2A)","TRNA METHYLTRANSFERASE 2A (TRM2A); (ATTRM2A)"]
["AT4G17610","red","tRNA/rRNA methyltransferase (SpoU) family protein;(source:Araport11)","TRNA METHYLTRANSFERASE 3 (TRM3)","TRNA METHYLTRANSFERASE 3 (TRM3); (ATTRM3)"]
["AT4G25730","red","FtsJ-like methyltransferase family protein;(source:Araport11)","TRNA METHYLTRANSFERASE 7B (TRM7B)","TRNA METHYLTRANSFERASE 7B (TRM7B); (ATTRM7B)"]
["AT3G26410","red","Encodes a protein involved in modification of nucleosides in tRNA. Mutants have only 7.3% 2-methylguanosine levels of wild type counterparts.","TRNA MODIFICATION 11 (TRM11)","TRNA MODIFICATION 11 (TRM11); (AtTRM11)"]
["AT3G16260","red","Encodes a tRNase Z. The mRNA is cell-to-cell mobile.","TRNASE Z4 (TRZ4)","TRNASE Z4 (TRZ4)"]
["AT4G23920","red","Encodes a protein with UDP-D-glucose 4-epimerase activity. Involved in growth and cell wall carbohydrate biosynthesis.","UDP-D-GLUCOSE/UDP-D-GALACTOSE 4-EPIMERASE 2 (UGE2)","UDP-D-GLUCOSE/UDP-D-GALACTOSE 4-EPIMERASE 2 (UGE2);UDP-GLC 4-EPIMERASE 2 (ATUGE2)"]
["AT5G05880","red","Encodes a nicotinate-N-glycosyltransferase.","UDP-GLUCOSYL TRANSFERASE 76C4 (UGT76C4)","UDP-GLUCOSYL TRANSFERASE 76C4 (UGT76C4)"]
["AT1G78270","red","UDP-glucosyl transferase 85A4;(source:Araport11)","UDP-GLUCOSYL TRANSFERASE 85A4 (UGT85A4)","UDP-GLUCOSYL TRANSFERASE 85A4 (AtUGT85A4);UDP-GLUCOSYL TRANSFERASE 85A4 (UGT85A4)"]
["AT1G22370","red","UDP-glucosyl transferase 85A5;(source:Araport11)","UDP-GLUCOSYL TRANSFERASE 85A5 (UGT85A5)","UDP-GLUCOSYL TRANSFERASE 85A5 (AtUGT85A5);UDP-GLUCOSYL TRANSFERASE 85A5 (UGT85A5)"]
["AT1G73880","red","UDP-glucosyl transferase 89B1;(source:Araport11)","UDP-GLUCOSYL TRANSFERASE 89B1 (UGT89B1)","UDP-GLUCOSYL TRANSFERASE 89B1 (UGT89B1)"]
["AT1G05680","red","Encodes a UDP-glucosyltransferase, UGT74E2, that acts on IBA (indole-3-butyric acid) and affects auxin homeostasis. The transcript and protein levels of this enzyme are strongly induced by H2O2 and may allow integration of ROS (reactive oxygen species) and auxin signaling. This enzyme can also transfer glycosyl groups to several compounds related to the explosive TNT when this synthetic compound is taken up from the environment.","URIDINE DIPHOSPHATE GLYCOSYLTRANSFERASE 74E2 (UGT74E2)","URIDINE DIPHOSPHATE GLYCOSYLTRANSFERASE 74E2 (UGT74E2)"]
["AT5G52380","red",0,null,"VASCULAR-RELATED NAC-DOMAIN 6 (VND6)"]
["AT4G07400","red","Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB1,2,and 4. When levels of all 4 genes are reduced plants show defects in growth and reduced levels of auxin response genes.","VIER F-BOX PROTEINE 3 (VFB3)","VIER F-BOX PROTEINE 3 (VFB3)"]
["AT5G28646","red","Encodes a novel protein. The wvd2 gain-of-function mutant has impaired cell expansion and root waving, and changed root skewing.","WAVE-DAMPENED 2 (WVD2)","WAVE-DAMPENED 2 (WVD2)"]
["AT1G55915","red","DNA-protein crosslink repair protease. WSS1A is involved in DNA-protein crosslink (DPC) repair and acts in independent pathways of the nuclease MUS81 and the phosphodiesterase TDP1. WSS1A is involved in the repair of replicative DNA damage (determination of dead cells in the root meristem using propidium Iodide staining). CRISPR wss1A mutants are camptothecin (CPT) and cis-platin hypersensitive and exhibit a fasciated growth phenotype and shortened roots","WSS1/SPRTN TYPE REPAIR PROTEASE A (WSS1A)","WSS1/SPRTN TYPE REPAIR PROTEASE A (WSS1A)"]
["AT4G05410","red","Encodes a nucleolar protein with seven WD40-repeats that plays a role in embryo sac development and is critical for the correct positioning of the division plane of zygote and the apical cell lineage in Arabidopsis. YAO may act by modulating nucleolar function, such as rRNA biogenesis, during early embryogenesis and gametogenesis.","YAOZHE (YAO)","YAOZHE (YAO)"]
["AT2G46800","red","Encodes a member of the zinc transporter (ZAT) and cation diffusion facilitator (CDF) families. It is expressed throughout the plant, especially in dividing, differentiating and expanding cells. The protein is localized to the vacuolar membrane. Mediates Zn ion homeostasis.","ZINC TRANSPORTER OF ARABIDOPSIS THALIANA (ZAT)","ZINC TRANSPORTER OF ARABIDOPSIS THALIANA (ZAT); (ATMTP1);METAL TOLERANCE PROTEIN 1 (MTP1);ZINC TRANSPORTER OF ARABIDOPSIS THALIANA 1 (ZAT1);A. THALIANA CATION DIFFUSION FACILITATOR 1 (ATCDF1);OVERLY ZINC SENSITIVE 1 (OZS1)"]
["AT5G10070","salmon","RNase L inhibitor protein-like protein;(source:Araport11)"]
["AT1G23050","salmon","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT2G01275","salmon","RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11)"]
["AT1G64065","salmon","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11)"]
["AT3G52105","salmon","DIS3-exonuclease-like protein;(source:Araport11)"]
["AT2G31985","salmon","lipoprotein (DUF1264);(source:Araport11)"]
["AT1G44414","salmon","zinc-ribbon domain protein;(source:Araport11)"]
["AT5G55135","salmon","hypothetical protein;(source:Araport11)"]
["AT1G69540","salmon","Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators."]
["AT5G53895","salmon","hypothetical protein;(source:Araport11)"]
["AT5G22540","salmon","Associated with a QTL for quantitative disease resistance."]
["AT5G37340","salmon","ZPR1 zinc-finger domain protein;(source:Araport11)"]
["AT5G66430","salmon","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT2G45040","salmon","Matrixin family protein;(source:Araport11)"]
["AT3G01990","salmon","Member of a small family of ACT domain containing proteins in Arabidopsis. ACT domains are involved in amino acid binding."]
["AT1G27030","salmon","hypothetical protein;(source:Araport11)"]
["AT1G80610","salmon","hypothetical protein;(source:Araport11)"]
["AT3G21380","salmon","Mannose-binding lectin superfamily protein;(source:Araport11)"]
["AT5G66590","salmon","CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein;(source:Araport11)"]
["AT2G27310","salmon","F-box family protein;(source:Araport11)"]
["AT1G48750","salmon","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)"]
["AT2G28780","salmon","P-hydroxybenzoic acid efflux pump subunit;(source:Araport11)"]
["AT5G61510","salmon","GroES-like zinc-binding alcohol dehydrogenase family protein;(source:Araport11)"]
["AT3G56880","salmon","VQ motif-containing protein;(source:Araport11)"]
["AT5G27220","salmon","Frigida-like protein;(source:Araport11)"]
["AT4G39130","salmon","Dehydrin family protein;(source:Araport11)"]
["AT3G63390","salmon","hypothetical protein;(source:Araport11)"]
["AT2G44990","salmon","More Axillary Branching; carotenoid cleavage dioxygenases."]
["AT5G25450","salmon","Possibly involved in response to heat stress since highly correlated based on differential expression with AT1G30070, AT1G54050 (HSP17.4B), AT1G74310 (HSP101), AT2G20560 (DNAJ), AT3G12580 (HSP70-4), AT4G12400 (HOP3)."]
["AT5G39530","salmon","hypothetical protein (DUF1997);(source:Araport11)"]
["AT5G54165","salmon","Avr9/Cf-9 rapidly elicited protein;(source:Araport11)"]
["AT1G47310","salmon","signal peptidase I;(source:Araport11)"]
["AT1G33102","salmon","hypothetical protein;(source:Araport11)"]
["AT1G62180","salmon","encodes a adenosine 5'-phosphosulfate reductase, involved in sulfate assimilation. Is a major effect locus for natural variation of shoot sulfate content in Arabidopsis.","5'ADENYLYLPHOSPHOSULFATE REDUCTASE 2 (APR2)","(ATAPR2);5'ADENYLYLPHOSPHOSULFATE REDUCTASE 2 (APR2);ADENOSINE-5'-PHOSPHOSULFATE REDUCTASE (APSR);3'-PHOSPHOADENOSINE-5'-PHOSPHOSULFATE (PAPS) REDUCTASE HOMOLOG 43 (PRH43); (PRH)"]
["AT4G20820","salmon","FAD-binding Berberine family protein;(source:Araport11)","(ATBBE18)","(ATBBE18)"]
["AT4G10250","salmon","Columbia endomembrane-localized small heat shock protein","(ATHSP22.0)","(ATHSP22.0); (HSP22)"]
["AT5G45630","salmon","senescence regulator (Protein of unknown function, DUF584);(source:Araport11)","(ATS40-2)","(ATS40-2)"]
["AT5G37670","salmon","HSP20-like chaperones superfamily protein;(source:Araport11)","(HSP15.7)","(HSP15.7)"]
["AT2G29500","salmon","HSP20-like chaperones superfamily protein.","(HSP17.6B)","(HSP17.6B)"]
["AT1G53540","salmon","Member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds","(HSP17.6C)","(HSP17.6C)"]
["AT1G07400","salmon","HSP20-like chaperones superfamily protein;(source:Araport11)","(HSP17.8)","(HSP17.8)"]
["AT2G19310","salmon","HSP20-like chaperones superfamily protein;(source:Araport11)","(HSP18.5)","(HSP18.5)"]
["AT5G51440","salmon","HSP20-like chaperones superfamily protein;(source:Araport11)","(HSP23.5)","(HSP23.5)"]
["AT1G52560","salmon","HSP20-like chaperones superfamily protein;(source:Araport11)","(HSP26.5)","(HSP26.5)"]
["AT2G38610","salmon","Member of the K-homologous (KH) family, members have a type of nucleic acid-binding protein containing the KH domain and has been found to affect splicing and transcriptional regulation.","(KH9)","(KH9)"]
["AT5G13240","salmon","Global repressor of RNA polymerase III (Pol III). Maf1 repressor activity is critical for plant survival during environmental stresses, and is regulated by its phosphorylation/dephosphorylation through the activity of TOR and PP4/PP2A phosphatases.","(MAF1)","(MAF1)"]
["AT1G69940","salmon","Encodes a protein with pectin methylesterase activity. The protein expression was shown to be highly restricted to the pollen grain (no detection in any other tissues or in the pollen grains' surrounding cells of the anthers.","(PPME1)","(PPME1); (ATPPME1)"]
["AT3G16910","salmon","Encodes a peroxisomal protein with acetyl-CoA synthetase activity that is responsible for the activation of acetate for entry into the glyoxylate cycle.","ACYL-ACTIVATING ENZYME 7 (AAE7)","ACYL-ACTIVATING ENZYME 7 (AAE7);ACETATE NON-UTILIZING 1 (ACN1); (BZU1)"]
["AT5G65080","salmon","Is upregulated during vernalization and regulates flowering time. Encodes MADS-domain protein. Two variants encoding proteins of 198 and 184 amino acids have been reported.","MADS AFFECTING FLOWERING 5 (MAF5)","AGAMOUS-LIKE 68 (AGL68);MADS AFFECTING FLOWERING 5 (MAF5)"]
["AT5G16970","salmon","encodes a 2-alkenal reductase (EC 1.3.1.74), plays a key role in the detoxification of reactive carbonyls","ALKENAL REDUCTASE (AER)","ALKENAL REDUCTASE (AT-AER);2-ALKENAL REDUCTASE (AER);ALKENAL REDUCTASE (AER)"]
["AT5G03910","salmon","member of ATH subfamily","ATP-BINDING CASSETTE B29 (ABCB29)","ARABIDOPSIS THALIANA ABC TRANSPORTER HOMOLOG 12 (ATATH12);ATP-BINDING CASSETTE B29 (ABCB29);ABC2 HOMOLOG 12 (ATH12)"]
["AT1G12060","salmon","A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.","BCL-2-ASSOCIATED ATHANOGENE 5 (BAG5)","BCL-2-ASSOCIATED ATHANOGENE 5 (ATBAG5);BCL-2-ASSOCIATED ATHANOGENE 5 (BAG5)"]
["AT2G46240","salmon","A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Expression of BAG6 in leaves was strongly induced by heat stress. Knockout mutants exhibited enhanced susceptibility to fungal pathogen Botrytis cinerea. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. The mRNA is cell-to-cell mobile.","BCL-2-ASSOCIATED ATHANOGENE 6 (BAG6)","BCL-2-ASSOCIATED ATHANOGENE 6 (BAG6);ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 6 (ATBAG6)"]
["AT3G21370","salmon","beta glucosidase 19;(source:Araport11)","BETA GLUCOSIDASE 19 (BGLU19)","BETA GLUCOSIDASE 19 (BGLU19)"]
["AT5G39520","salmon","Plastid localized transmembrane protein involved in ABA mediated leaf senescence and stomatal movement.","CHLOROPLAST-LOCALIZED SENESCENCE-ASSOCIATED PROTEIN (CSAP)","CHLOROPLAST-LOCALIZED SENESCENCE-ASSOCIATED PROTEIN (CSAP)"]
["AT2G38340","salmon","encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.","DEHYDRATION RESPONSE ELEMENT-BINDING PROTEIN 19 (DREB19)","DEHYDRATION RESPONSE ELEMENT-BINDING PROTEIN 19 (DREB19)"]
["AT1G74710","salmon","Encodes a protein with isochorismate synthase activity. Mutants fail to accumulate salicylic acid. Its function may be redundant with that of ICS2 (AT1G18870).","ENHANCED DISEASE SUSCEPTIBILITY TO ERYSIPHE ORONTII 16 (EDS16)","ENHANCED DISEASE SUSCEPTIBILITY TO ERYSIPHE ORONTII 16 (EDS16);ISOCHORISMATE SYNTHASE 1 (ICS1);SALICYLIC ACID INDUCTION DEFICIENT 2 (SID2)"]
["AT2G46660","salmon","Encodes a member of CYP78A cytochrome P450 monooxygenase protein family that is required in the sporophytic tissue of the mother plant to promote seed growth.","CYTOCHROME P450, FAMILY 78, SUBFAMILY A, POLYPEPTIDE 6 (CYP78A6)","ENHANCER OF DA1-1 (EOD3);CYTOCHROME P450, FAMILY 78, SUBFAMILY A, POLYPEPTIDE 6 (CYP78A6)"]
["AT4G36620","salmon","Encodes a member of the GATA factor family of zinc finger transcription factors.","GATA TRANSCRIPTION FACTOR 19 (GATA19)","GATA TRANSCRIPTION FACTOR 19 (GATA19);HANABA TARANU LIKE 2 (HANL2)"]
["AT4G25130","salmon","Encodes a chloroplast-localized methionine sulfoxide reductase that is a member of the MSRA family. Involved in protection of chloroplasts from oxidative stress.","PEPTIDE MET SULFOXIDE REDUCTASE 4 (PMSR4)","METHIONINE SULFOXIDE REDUCTASE A4 (MSRA4);PEPTIDE MET SULFOXIDE REDUCTASE 4 (PMSR4)"]
["AT4G25200","salmon","AtHSP23.6-mito mRNA, nuclear gene encoding mitochondrial","MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6 (HSP23.6-MITO)","MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6 (ATHSP23.6-MITO);MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6 (HSP23.6-MITO)"]
["AT5G63790","salmon","Encodes a member of the NAC family of transcription factors. ANAC102 appears to have a role in mediating response to low oxygen stress (hypoxia) in germinating seedlings. Its expression can be induced by beta-cyclocitral, an oxidized by-product of beta-carotene generated in the chloroplasts, mediates a protective retrograde response that lowers the levels of toxic peroxides and carbonyls, limiting damage to intracellular components. The existence of four possible isoforms has been proposed.","NAC DOMAIN CONTAINING PROTEIN 102 (NAC102)","NAC DOMAIN CONTAINING PROTEIN 102 (NAC102);NAC DOMAIN CONTAINING PROTEIN 102 (ANAC102)"]
["AT1G77450","salmon","NAC domain transcriptional regulator that is induced by ROS in roots where it regulates the expression of downstream genes such as MYB30.","NAC DOMAIN CONTAINING PROTEIN 32 (NAC032)","NAC DOMAIN CONTAINING PROTEIN 32 (anac032);NAC DOMAIN CONTAINING PROTEIN 32 (NAC032); (NAC32)"]
["AT4G19170","salmon","Encodes a chloroplast-targeted member of a family of enzymes similar to nine-cis-epoxycarotenoid dioxygenase that acts as a major regulator of carotenoid degradation during dark-induced leaf senescence.. The mRNA is cell-to-cell mobile.","NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 4 (NCED4)","NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 4 (NCED4);CAROTENOID CLEAVAGE DIOXYGENASE 4 (CCD4)"]
["AT1G12940","salmon","member of High affinity nitrate transporter family","NITRATE TRANSPORTER2.5 (NRT2.5)","NITRATE TRANSPORTER2.5 (ATNRT2.5);NITRATE TRANSPORTER2.5 (NRT2.5)"]
["AT4G26270","salmon","phosphofructokinase 3;(source:Araport11)","PHOSPHOFRUCTOKINASE 3 (PFK3)","PHOSPHOFRUCTOKINASE 3 (PFK3)"]
["AT5G02950","salmon","Tudor/PWWP/MBT superfamily protein;(source:Araport11)","PWWP DOMAIN PROTEIN 5 (PDP5)","PWWP DOMAIN PROTEIN 5 (PDP5)"]
["AT5G45870","salmon","Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.","PYR1-LIKE 12 (PYL12)","PYR1-LIKE 12 (PYL12);REGULATORY COMPONENTS OF ABA RECEPTOR 6 (RCAR6)"]
["AT1G20140","salmon","SKP1-like 4;(source:Araport11)","SKP1-LIKE 4 (SK4)","SKP1-LIKE 4 (SK4);SKP1-LIKE 4 (ASK4)"]
["AT1G78000","salmon","Encodes a sulfate transporter that can restore sulfate uptake capacity of a yeast mutant lacking sulfate transporter genes.","SULFATE TRANSPORTER 1;2 (SULTR1;2)","SULFATE TRANSPORTER 1;2 (SULTR1;2);SELENATE RESISTANT 1 (SEL1)"]
["AT5G04590","salmon","A.thaliana gene encoding sulfite reductase.","SULFITE REDUCTASE (SIR)","SULFITE REDUCTASE (SIR)"]
["AT4G28240","salmon","Member of the wound-induced polypeptide (WIP) family. Positively regulates plant resistance against Pst DC3000 by enhancing PTI responses.","WOUND-INDUCED POLYPEPTIDE 1 (WIP1)","WOUND-INDUCED POLYPEPTIDE 1 (WIP1)"]
["AT5G56210","salmon","Encodes an outer nuclear membrane protein that anchors RanGAP1 to the nuclear envelope. It interacts with SUN proteins and is required for maintaining the elongated nuclear shape of epidermal cells.","WPP DOMAIN INTERACTING PROTEIN 2 (WIP2)","WPP DOMAIN INTERACTING PROTEIN 2 (WIP2)"]
["AT3G01516","tan","transmembrane protein;(source:Araport11)"]
["AT4G02580","tan","NADH-ubiquinone oxidoreductase 24 kDa subunit;(source:Araport11)"]
["AT5G19570","tan","transmembrane protein;(source:Araport11)"]
["AT5G16870","tan","Peptidyl-tRNA hydrolase II (PTH2) family protein;(source:Araport11)"]
["AT5G14430","tan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT1G26620","tan","T-box transcription factor, putative (DUF863);(source:Araport11)"]
["AT4G17940","tan","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G24760","tan","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT1G54360","tan","Encodes one of two Arabidopsis proteins with significant similarity to the histone fold TBP-associated factor TAF6."]
["AT2G21960","tan","Membrane protein (ECM1), contains protease domain, located in chloroplast."]
["AT3G12587","tan","Oligosaccaryltransferase;(source:Araport11)"]
["AT3G15610","tan","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT5G45510","tan","Leucine-rich repeat (LRR) family protein;(source:Araport11)"]
["AT5G14230","tan","ankyrin;(source:Araport11)"]
["AT5G11550","tan","ARM repeat superfamily protein;(source:Araport11)"]
["AT4G35985","tan","Senescence/dehydration-associated protein-like protein;(source:Araport11)"]
["AT1G11670","tan","MATE efflux family protein;(source:Araport11)"]
["AT2G43945","tan","Located in chloroplast thylakoid, involved in change to H2O2."]
["AT5G49540","tan","Rab5-interacting family protein;(source:Araport11)"]
["AT3G23080","tan","Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11)"]
["AT1G30890","tan","Integral membrane HRF1 family protein;(source:Araport11)"]
["AT1G57600","tan","MBOAT (membrane bound O-acyl transferase) family protein;(source:Araport11)"]
["AT5G64130","tan","cAMP-regulated phosphoprotein 19-related protein;(source:Araport11)"]
["AT2G40960","tan","Single-stranded nucleic acid binding R3H protein;(source:Araport11)"]
["AT1G73470","tan","hypothetical protein;(source:Araport11)"]
["AT5G14000","tan","NAC domain containing protein 84;(source:Araport11)"]
["AT1G61800","tan","glucose6-Phosphate/phosphate transporter 2, prefers to exchange Pi or Triose-P for G6P, targets only plastids. Expression is upregulated in the shoot of cax1/cax3 mutant.The mRNA is cell-to-cell mobile."]
["AT2G17320","tan","pantothenate kinase;(source:Araport11)"]
["AT3G01590","tan","Galactose mutarotase-like superfamily protein;(source:Araport11)"]
["AT3G02760","tan","Class II aaRS and biotin synthetases superfamily protein;(source:Araport11)"]
["AT2G36885","tan","translation initiation factor;(source:Araport11)"]
["AT2G39960","tan","Microsomal signal peptidase 25 kDa subunit (SPC25);(source:Araport11)"]
["AT1G22790","tan","Low affinity potassium transport system protein;(source:Araport11)"]
["AT3G52470","tan","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11)"]
["AT1G61770","tan","J domain protein. The mRNA is cell-to-cell mobile."]
["AT2G05100","tan","Lhcb2.1 protein encoding a subunit of the light harvesting complex II. Member of a gene family with high degree of sequence similarity. Initially LHCB2.3 was considered as a separate gene but appears to be an allele of LHCB2.1."]
["AT2G35450","tan","catalytic/ hydrolase;(source:Araport11)"]
["AT4G29680","tan","Alkaline-phosphatase-like family protein;(source:Araport11)"]
["AT4G08520","tan","SNARE-like superfamily protein;(source:Araport11)"]
["AT5G56747","tan","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 1.2e-45 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea);(source:TAIR10)"]
["AT1G19715","tan","Mannose-binding lectin superfamily protein;(source:Araport11)"]
["AT3G18050","tan","GPI-anchored protein;(source:Araport11)"]
["AT5G12900","tan","DNA double-strand break repair RAD50 ATPase;(source:Araport11)"]
["AT2G45340","tan","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT2G04305","tan","Magnesium transporter CorA-like family protein;(source:Araport11)"]
["AT2G42190","tan","rho GTPase-activating gacO-like protein;(source:Araport11)"]
["AT3G55420","tan","hypothetical protein;(source:Araport11)"]
["AT3G07568","tan","fanconi anemia group D2 protein;(source:Araport11)"]
["AT1G12900","tan","glyceraldehyde 3-phosphate dehydrogenase A subunit 2;(source:Araport11)"]
["AT3G43540","tan","initiation factor 4F subunit (DUF1350);(source:Araport11)"]
["AT1G21440","tan","Phosphoenolpyruvate carboxylase family protein;(source:Araport11)"]
["AT1G04430","tan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT5G56590","tan","O-Glycosyl hydrolases family 17 protein;(source:Araport11)"]
["AT3G01980","tan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT4G39970","tan","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)"]
["AT4G23740","tan","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT1G61260","tan","cotton fiber (DUF761);(source:Araport11)"]
["AT5G10800","tan","RNA recognition motif (RRM)-containing protein;(source:Araport11)"]
["AT1G18670","tan","Encodes a cyclin-dependent kinase-like protein with a ser/thr protein kinase domain and an N-terminal myristoylation sequence. Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do."]
["AT4G10470","tan","hypothetical protein;(source:Araport11)"]
["AT3G29130","tan","kxDL motif protein;(source:Araport11)"]
["AT1G44835","tan","YbaK/aminoacyl-tRNA synthetase-associated domain-containing protein;(source:Araport11)"]
["AT1G32860","tan","Glycosyl hydrolase superfamily protein;(source:Araport11)"]
["AT1G01540","tan","Protein kinase superfamily protein;(source:Araport11)"]
["AT4G38330","tan","hemolysin-III integral membrane-like protein;(source:Araport11)"]
["AT5G27550","tan","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT2G22650","tan","FAD-dependent oxidoreductase family protein;(source:Araport11)"]
["AT4G21620","tan","glycine-rich protein;(source:Araport11)"]
["AT4G35980","tan","hypothetical protein;(source:Araport11)"]
["AT2G24550","tan","major centromere autoantigen B-like protein;(source:Araport11)"]
["AT3G60380","tan","cotton fiber protein;(source:Araport11)"]
["AT2G44660","tan","ALG6, ALG8 glycosyltransferase family;(source:Araport11)"]
["AT2G43530","tan","Encodes a defensin-like (DEFL) family protein. The mRNA is cell-to-cell mobile."]
["AT2G27385","tan","Pollen Ole e 1 allergen and extensin family protein;(source:Araport11)"]
["AT5G19340","tan","hypothetical protein;(source:Araport11)"]
["AT2G32500","tan","Stress responsive alpha-beta barrel domain protein;(source:Araport11)"]
["AT5G11640","tan","Thioredoxin superfamily protein;(source:Araport11)"]
["AT2G45700","tan","sterile alpha motif (SAM) domain-containing protein;(source:Araport11)"]
["AT1G12400","tan","Nucleotide excision repair, TFIIH, subunit TTDA;(source:Araport11)"]
["AT3G06435","tan","Expressed protein;(source:Araport11)"]
["AT5G38212","tan","Natural antisense transcript overlaps with AT5G38210;(source:Araport11)"]
["AT5G57700","tan","BNR/Asp-box repeat family protein;(source:Araport11)"]
["AT4G24330","tan","hypothetical protein (DUF1682);(source:Araport11)"]
["AT5G66550","tan","Maf-like protein;(source:Araport11)"]
["AT5G67200","tan","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT3G54390","tan","sequence-specific DNA binding transcription factor;(source:Araport11)"]
["AT5G53090","tan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT5G35170","tan","adenylate kinase family protein;(source:Araport11)"]
["AT5G51010","tan","Rubredoxin-like superfamily protein;(source:Araport11)"]
["AT2G21160","tan","Translocon-associated protein (TRAP), alpha subunit;(source:Araport11)"]
["AT3G15220","tan","Protein kinase superfamily protein;(source:Araport11)"]
["AT2G12400","tan","plasma membrane fusion protein;(source:Araport11)"]
["AT4G12800","tan","Encodes subunit L of photosystem I reaction center."]
["AT5G20080","tan","FAD/NAD(P)-binding oxidoreductase;(source:Araport11)"]
["AT1G69910","tan","Protein kinase superfamily protein;(source:Araport11)"]
["AT5G21060","tan","Glyceraldehyde-3-phosphate dehydrogenase-like family protein;(source:Araport11)"]
["AT5G15320","tan","ATP synthase E chain;(source:Araport11)"]
["AT4G30020","tan","PA-domain containing subtilase family protein;(source:Araport11)"]
["AT3G29075","tan","glycine-rich protein;(source:Araport11)"]
["AT1G16825","tan","Reticulon family protein;(source:Araport11)"]
["AT2G23820","tan","Metal-dependent phosphohydrolase;(source:Araport11)"]
["AT1G19690","tan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT3G62400","tan","cytochrome C oxidase subunit;(source:Araport11)"]
["AT2G21530","tan","Forkhead-domain protein with regulatory function, located in chloroplast."]
["AT4G11450","tan","bromo-adjacent domain protein, putative (DUF3527);(source:Araport11)"]
["AT1G13380","tan","sodium/hydrogen exchanger (DUF1218);(source:Araport11)"]
["AT2G39130","tan","Transmembrane amino acid transporter family protein;(source:Araport11)"]
["AT2G37660","tan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT4G03150","tan","plant/protein;(source:Araport11)"]
["AT1G63640","tan","P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein;(source:Araport11)"]
["AT4G29735","tan","transmembrane protein;(source:Araport11)"]
["AT1G45120","tan","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 1.5e-294 P-value blast match to GB:CAA72989 open reading frame 1 (Ty1_Copia-element) (Brassica oleracea);(source:TAIR10)"]
["AT5G43830","tan","aluminum induced protein with YGL and LRDR motifs;(source:Araport11)"]
["AT1G24764","tan","Member of the MAP70 protein family."]
["AT5G40710","tan","zinc finger (C2H2 type) family protein;(source:Araport11)"]
["AT5G05200","tan","ABC1- atypical kinase"]
["AT3G15640","tan","Rubredoxin-like superfamily protein;(source:Araport11)"]
["AT2G36470","tan","DUF868 family protein, putative (DUF868);(source:Araport11)"]
["AT1G22520","tan","MICOS complex subunit Mic10-like protein (DUF543);(source:Araport11)"]
["AT2G44500","tan","O-fucosyltransferase family protein;(source:Araport11)"]
["AT3G07950","tan","rhomboid protein-like protein;(source:Araport11)"]
["AT1G74470","tan","Encodes for a multifunctional protein with geranylgeranyl reductase activity shown to catalyze the reduction of prenylated geranylgeranyl-chlorophyll a to phytyl-chlorophyll a (chlorophyll a) and free geranylgeranyl pyrophosphate to phytyl pyrophosphate. The mRNA is cell-to-cell mobile."]
["AT5G63680","tan","Pyruvate kinase family protein;(source:Araport11)"]
["AT1G17350","tan","NADH:ubiquinone oxidoreductase intermediate-associated protein 30;(source:Araport11)"]
["AT4G17100","tan","poly(U)-specific endoribonuclease-B protein;(source:Araport11)"]
["AT3G10630","tan","UDP-Glycosyltransferase superfamily protein;(source:Araport11)"]
["AT1G74170","tan","receptor like protein 13;(source:Araport11)"]
["AT3G25580","tan","Thioredoxin superfamily protein;(source:Araport11)"]
["AT5G22400","tan","Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein;(source:Araport11)"]
["AT1G21350","tan","Thioredoxin superfamily protein;(source:Araport11)"]
["AT5G11730","tan","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT4G33640","tan","costars family protein;(source:Araport11)"]
["AT1G76100","tan","One of two Arabidopsis plastocyanin genes. Expressed at 1/10th level of PETE2. Does not respond to increased copper levels and is thought to be the isoform that participates in electron transport under copper-limiting conditions. Mutation of this gene does not have obvious effect on photosynthesis."]
["AT3G08930","tan","LMBR1-like membrane protein;(source:Araport11)"]
["AT4G01130","tan","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates."]
["AT5G25475","tan","AP2/B3-like transcriptional factor family protein;(source:Araport11)"]
["AT2G24610","tan","Member of Cyclic nucleotide gated channel family; a plasma membrane localized Ca2+ chan\u0002nel, which is required for the normal growth of Arabidopsis root hair tip."]
["AT3G56160","tan","Sodium Bile acid symporter family;(source:Araport11)"]
["AT4G13495","tan","other_RNA;(source:Araport11)"]
["AT5G52545","tan","RNA-binding protein-like RNA recognition motif protein;(source:Araport11)"]
["AT5G13980","tan","Glycosyl hydrolase family 38 protein;(source:Araport11)"]
["AT1G22850","tan","SNARE associated protein which functions as a receptor and is located in the chloroplast."]
["AT3G52730","tan","ubiquinol-cytochrome C reductase UQCRX/QCR9-like family protein;(source:Araport11)"]
["AT3G22120","tan","Cell wall-plasma membrane linker protein homolog (CWLP)"]
["AT3G24210","tan","Ankyrin repeat family protein;(source:Araport11)"]
["AT1G62330","tan","O-fucosyltransferase family protein;(source:Araport11)"]
["AT1G80280","tan","Plasma membrane localized protein that binds to to Xanthomonas campestris pv. campestris XopAM avirulent effector protein."]
["AT2G33735","tan","Chaperone DnaJ-domain superfamily protein;(source:Araport11)"]
["AT1G49580","tan","Calcium-dependent protein kinase (CDPK) family protein;(source:Araport11)"]
["AT4G02010","tan","Protein kinase superfamily protein;(source:Araport11)"]
["AT5G04420","tan","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT4G39570","tan","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT5G43140","tan","Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein;(source:Araport11)"]
["AT3G25013","tan","Synaptobrevin family protein;(source:Araport11)"]
["AT4G16447","tan","hypothetical protein;(source:Araport11)"]
["AT1G17940","tan","Endosomal targeting BRO1-like domain-containing protein;(source:Araport11)"]
["AT1G03260","tan","SNARE associated Golgi protein family;(source:Araport11)"]
["AT5G62890","tan","Xanthine/uracil permease family protein;(source:Araport11)"]
["AT4G28706","tan","pfkB-like carbohydrate kinase family protein;(source:Araport11)"]
["AT1G22403","tan","other_RNA;(source:Araport11)"]
["AT4G30680","tan","Initiation factor eIF-4 gamma, MA3;(source:Araport11)"]
["AT1G73200","tan","testis-expressed sequence 2-like protein (DUF2404);(source:Araport11)"]
["AT4G11100","tan","gelsolin protein;(source:Araport11)"]
["AT5G14390","tan","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT1G33470","tan","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT2G46000","tan","LDL receptor wingless signaling/trafficking chaperone;(source:Araport11)"]
["AT1G08350","tan","Endomembrane protein 70 protein family;(source:Araport11)"]
["AT1G28510","tan","Optic atrophy 3 protein (OPA3);(source:Araport11)"]
["AT1G64850","tan","Calcium-binding EF hand family protein;(source:Araport11)"]
["AT3G13690","tan","kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)"]
["AT1G15260","tan","LOW protein: ATP-dependent RNA helicase-like protein;(source:Araport11)"]
["AT4G09010","tan","Encodes a thylakoid lumen protein that was initially believed to act as a microsomal ascorbate peroxidase APX4 but to date, no evidence of enzymatic activity has been found."]
["AT5G39790","tan","Encodes a chloroplast localized protein that is involved in protein translocation and starch metabolism. PTST helps localize GBSS to the starch granules where GBSS functions in amylose biosynthesis."]
["AT5G02502","tan","Oligosaccaryltransferase;(source:Araport11)"]
["AT2G20820","tan","hypothetical protein;(source:Araport11)"]
["AT3G12685","tan","Acid phosphatase/vanadium-dependent haloperoxidase-related protein;(source:Araport11)"]
["AT5G10750","tan","enhanced disease resistance-like protein (DUF1336);(source:Araport11)"]
["AT2G47710","tan","Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)"]
["AT4G30010","tan","ATP-dependent RNA helicase;(source:Araport11)"]
["AT3G15940","tan","UDP-Glycosyltransferase superfamily protein;(source:Araport11)"]
["AT5G64600","tan","O-fucosyltransferase family protein;(source:Araport11)"]
["AT2G41190","tan","Transmembrane amino acid transporter family protein;(source:Araport11)"]
["AT1G73120","tan","F-box/RNI superfamily protein;(source:Araport11)"]
["AT3G07130","tan","Encodes PAP15, a purple acid phosphatase with phytase activity. Expression of PAP15 is developmentally and temporally regulated, with strong expression at the early stages of seedling growth and pollen germination. The expression is also organ/tissue-specific, with strongest expression in the vasculature, pollen grains, and roots. Recombinant PAP protein exhibits broad substrate specificity with moderate phytase activity. PAP15 likely mobilizes phosphorus reserves in plants, particularly during seed and pollen germination."]
["AT5G63150","tan","hypothetical protein;(source:Araport11)"]
["AT3G43610","tan","Spc97 / Spc98 family of spindle pole body (SBP) component;(source:Araport11)"]
["AT2G47690","tan","NADH-ubiquinone oxidoreductase-like protein;(source:Araport11)"]
["AT5G49950","tan","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT2G18100","tan","transmembrane/coiled-coil protein (DUF726);(source:Araport11)"]
["AT5G46150","tan","LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein;(source:Araport11)"]
["AT3G15570","tan","Phototropic-responsive NPH3 family protein;(source:Araport11)"]
["AT5G47490","tan","RGPR-like protein;(source:Araport11)"]
["AT2G26210","tan","Ankyrin repeat family protein;(source:Araport11)"]
["AT4G21720","tan","defensin-like protein;(source:Araport11)"]
["AT5G14210","tan","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT2G19680","tan","Mitochondrial ATP synthase subunit G protein;(source:Araport11)"]
["AT2G27590","tan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT1G17360","tan","LOW protein: protein phosphatase 1 regulatory subunit-like protein;(source:Araport11)"]
["AT1G28410","tan","myosin heavy chain-like protein;(source:Araport11)"]
["AT4G16265","tan","One of two highly similar, non-catalytic subunits common to nuclear DNA-directed RNA polymerases II, IV and V; homologous to budding yeast RPB9. Appears to be redundant with At3g16980"]
["AT4G04565","tan","None;(source:Araport11)"]
["AT5G57970","tan","DNA glycosylase superfamily protein;(source:Araport11)"]
["AT4G23000","tan","Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11)"]
["AT4G18030","tan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT4G10550","tan","Subtilase family protein;(source:Araport11)"]
["AT3G29760","tan","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)"]
["AT3G22850","tan","aluminum induced protein with YGL and LRDR motifs;(source:Araport11)"]
["AT3G47560","tan","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT5G56530","tan","Domain of unknown function 239 (DUF239) gene; conserved Neprosin-like catalytic domain; possibly involved in seed development."]
["AT1G48610","tan","AT hook motif-containing protein;(source:Araport11)"]
["AT5G59613","tan","ATP synthase;(source:Araport11)"]
["AT1G36980","tan","transmembrane 50A-like protein;(source:Araport11)"]
["AT5G11000","tan","hypothetical protein (DUF868);(source:Araport11)"]
["AT4G00525","tan","hypothetical protein;(source:Araport11)"]
["AT5G42070","tan","hypothetical protein;(source:Araport11)"]
["AT3G23470","tan","Cyclopropane-fatty-acyl-phospholipid synthase;(source:Araport11)"]
["AT5G41810","tan","Avr9/Cf-9 rapidly elicited protein;(source:Araport11)"]
["AT2G43490","tan","Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11)"]
["AT4G15080","tan","DHHC-type zinc finger family protein;(source:Araport11)"]
["AT2G21250","tan","NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11)"]
["AT5G64520","tan","Encodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects."]
["AT1G79720","tan","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT1G72020","tan","TonB-dependent heme receptor A;(source:Araport11)"]
["AT1G44760","tan","Adenine nucleotide alpha hydrolases-like superfamily protein;(source:Araport11)"]
["AT1G26900","tan","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT4G33380","tan","dimethylallyl, adenosine tRNA methylthiotransferase;(source:Araport11)"]
["AT4G19510","tan","Disease resistance protein (TIR-NBS-LRR class);(source:Araport11)"]
["AT2G04955","tan","None;(source:Araport11)"]
["AT1G22630","tan","SSUH2-like protein;(source:Araport11)"]
["AT5G47540","tan","Mo25 family protein;(source:Araport11)"]
["AT1G59520","tan","Encodes CW7."]
["AT5G54630","tan","zinc finger protein-like protein;(source:Araport11)"]
["AT2G32390","tan","Encodes a ionotropic glutamate receptor ortholog, a member of a putative ligand-gated ion channel subunit family."]
["AT2G28310","tan","trimethylguanosine synthase (DUF707);(source:Araport11)"]
["AT2G40480","tan","WEB family protein (DUF827);(source:Araport11)"]
["AT1G20810","tan","FKBP-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11)"]
["AT1G19130","tan","RmlC-like jelly roll fold protein;(source:Araport11)"]
["AT5G18590","tan","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT4G26130","tan","cotton fiber protein;(source:Araport11)"]
["AT3G15770","tan","hypothetical protein;(source:Araport11)"]
["AT3G53560","tan","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G09390","tan","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates."]
["AT5G61190","tan","putative endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain-containing protein;(source:Araport11)"]
["AT2G38680","tan","5-nucleotidase / magnesium ion binding protein;(source:Araport11)"]
["AT4G39955","tan","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT2G30050","tan","transducin family protein / WD-40 repeat family protein;(source:Araport11)"]
["AT3G07210","tan","hypothetical protein;(source:Araport11)"]
["AT3G17280","tan","F-box and associated interaction domains-containing protein;(source:Araport11)"]
["AT4G39235","tan","hypothetical protein;(source:Araport11)"]
["AT5G24610","tan","cyclic AMP-responsive element-binding protein;(source:Araport11)"]
["AT1G24160","tan","triadin;(source:Araport11)"]
["AT3G14410","tan","Nucleotide/sugar transporter family protein"]
["AT3G01142","tan","Natural antisense transcript overlaps with AT3G01140;(source:Araport11)"]
["AT4G20430","tan","Subtilase family protein;(source:Araport11)"]
["AT5G10110","tan","DNA-directed RNA polymerase subunit beta;(source:Araport11)"]
["AT2G40765","tan","transmembrane protein;(source:Araport11)"]
["AT3G20790","tan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT4G01510","tan","Arv1-like protein;(source:Araport11)"]
["AT5G43460","tan","HR-like lesion-inducing protein-like protein;(source:Araport11)"]
["AT4G20150","tan","excitatory amino acid transporter;(source:Araport11)"]
["AT1G67590","tan","Remorin family protein;(source:Araport11)"]
["AT3G28160","tan","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 1.4e-06 P-value blast match to GB:CAA31653 polyprotein (Ty1_Copia-element) (Arabidopsis thaliana);(source:TAIR10)"]
["AT5G01290","tan","mRNA capping enzyme family protein;(source:Araport11)"]
["AT5G52180","tan","transmembrane protein 161AB protein;(source:Araport11)"]
["AT5G58800","tan","Quinone reductase family protein;(source:Araport11)"]
["AT2G47760","tan","Encodes an &#945;-1,3-mannosyltransferase. Plants with mutations in the ALG3 protein have abnormal gylcoslation profiles. They also exhibit abnormal responses to MAMPs possibly because the glycan properties of FL22 are affected."]
["AT4G03635","tan","F-box/LRR protein;(source:Araport11)"]
["AT3G21250","tan","member of MRP subfamily"]
["AT1G17285","tan","transmembrane protein;(source:Araport11)"]
["AT1G19710","tan","UDP-Glycosyltransferase superfamily protein;(source:Araport11)"]
["AT4G25870","tan","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT1G09460","tan","Carbohydrate-binding X8 domain superfamily protein;(source:Araport11)"]
["AT5G05370","tan","Cytochrome b-c1 complex, subunit 8 protein;(source:Araport11)"]
["AT1G73170","tan","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT5G66000","tan","hypothetical protein;(source:Araport11)"]
["AT5G23920","tan","transmembrane protein;(source:Araport11)"]
["AT1G64670","tan","Encodes a epidermally expressed extracellular protein that likely functions as an alpha-beta hydrolase and is required for normal cuticle formation. Homozygous mutant plants are dwarfed and have abnormal leaves, collapsed cells, reduced numbers of trichomes. The specific role of BDG is unclear: it may function in cutin biosynthesis or as a cross-linking enzyme in the cell wall itself."]
["AT4G26860","tan","Putative pyridoxal phosphate-dependent enzyme, YBL036C type;(source:Araport11)"]
["AT5G14790","tan","ARM repeat superfamily protein;(source:Araport11)"]
["AT4G14096","tan","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT5G50180","tan","Protein kinase superfamily protein;(source:Araport11)"]
["AT2G39870","tan","hypothetical protein;(source:Araport11)"]
["AT2G01090","tan","Ubiquinol-cytochrome C reductase hinge protein;(source:Araport11)"]
["AT1G67510","tan","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT5G49555","tan","FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11)"]
["AT3G42052","tan","transposable_element_gene;(source:Araport11);gypsy-like retrotransposon family, has a 4.0e-162 P-value blast match to GB:AAD19359 polyprotein (gypsy_Ty3-element) (Sorghum bicolor);(source:TAIR10)"]
["AT1G63110","tan","GPI transamidase subunit PIG-U;(source:Araport11)"]
["AT4G09200","tan","SPla/RYanodine receptor (SPRY) domain-containing protein;(source:Araport11)"]
["AT5G17250","tan","Alkaline-phosphatase-like family protein;(source:Araport11)"]
["AT5G45275","tan","Major facilitator superfamily protein;(source:Araport11)"]
["AT3G28040","tan","Leucine-rich receptor-like protein kinase family protein;(source:Araport11)"]
["AT5G05010","tan","clathrin adaptor complexes medium subunit family protein;(source:Araport11)"]
["AT2G34680","tan","isolated from differential screening of a cDNA library from auxin-treated root culture. sequence does not show homology to any known proteins and is predicted to be extracellular."]
["AT2G26730","tan","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT5G11330","tan","FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11)"]
["AT4G34265","tan","hypothetical protein;(source:Araport11)"]
["AT1G23750","tan","Nucleic acid-binding, OB-fold-like protein;(source:Araport11)"]
["AT4G16060","tan","hypothetical protein;(source:Araport11)"]
["AT5G37790","tan","Protein kinase superfamily protein;(source:Araport11)"]
["AT4G14905","tan","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT3G54440","tan","glycoside hydrolase family 2 protein;(source:Araport11)"]
["AT4G21880","tan","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G52870","tan","IQ calmodulin-binding motif family protein;(source:Araport11)"]
["AT5G51560","tan","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT2G47380","tan","Cytochrome c oxidase subunit Vc family protein;(source:Araport11)"]
["AT1G80530","tan","Major facilitator superfamily protein;(source:Araport11)"]
["AT4G28990","tan","RNA-binding protein-like protein;(source:Araport11)"]
["AT5G01215","tan","Natural antisense transcript overlaps with AT5G01210;(source:Araport11)"]
["AT4G21570","tan","organic solute transporter ostalpha protein (DUF300);(source:Araport11)"]
["AT2G26340","tan","hypothetical protein;(source:Araport11)"]
["AT4G30660","tan","Low temperature and salt responsive protein family;(source:Araport11)"]
["AT5G11750","tan","Ribosomal protein L19 family protein;(source:Araport11)"]
["AT1G67785","tan","hypothetical protein;(source:Araport11)"]
["AT3G20390","tan","Encodes a plastidial RidA (Reactive Intermediate Deaminase A) homolog that hydrolyzes the enamines/imines formed by Thr dehydratase from Ser or Thr. RidA accelerates the deamination of reactive enamine/imine intermediates produced by threonine dehydratase (At3g10050) with threonine or serine as substrates. In the absence of RidA, the serine-derived imine inactivates BCAT3 (At3g49680). RidA thus pre-empts damage to BCAT3 by hydrolyzing the reactive imine before it does damage."]
["AT4G16155","tan","dihydrolipoamide dehydrogenase;(source:Araport11)"]
["AT3G03040","tan","F-box/RNI-like superfamily protein. Idenfitied in GWAS as locus involved in response to the defense molecule, allyl glucosinolate."]
["AT5G58510","tan","Rab3 GTPase-activating protein catalytic protein;(source:Araport11)"]
["AT2G07170","tan","ARM repeat superfamily protein;(source:Araport11)"]
["AT1G77480","tan","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT1G22160","tan","senescence-associated family protein (DUF581);(source:Araport11)"]
["AT4G02540","tan","Cysteine/Histidine-rich C1 domain family protein;(source:Araport11)"]
["AT4G37830","tan","cytochrome c oxidase-like protein;(source:Araport11)"]
["AT5G07870","tan","HXXXD-type acyl-transferase family protein;(source:Araport11)"]
["AT1G45249","tan","Leucine zipper transcription factor that binds to the abscisic acid (ABA)?responsive element (ABRE) motif in the promoter region of ABA-inducible genes. Enhances drought tolerance in vegetative tissues. Required for normal glucose response. Localized in the nucleus. Expressed constitutively in roots, leaf vascular tissues, and hydathodes or in all tissues under stress conditions. It Primes phosphorylated by a ABA-activated 42-KDa kinase. Overexpression of the phosphorylated active form of AREB1 expressed many ABA-inducible genes, such as RD29B, without ABA treatment."]
["AT4G10400","tan","F-box/RNI-like/FBD-like domains-containing protein;(source:Araport11)"]
["AT3G23760","tan","transferring glycosyl group transferase;(source:Araport11)"]
["AT4G17670","tan","senescence-associated family protein (DUF581);(source:Araport11)"]
["AT1G14450","tan","NADH dehydrogenase (ubiquinone)s;(source:Araport11)"]
["AT1G65370","tan","TRAF-like family protein;(source:Araport11)"]
["AT1G12460","tan","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT5G18460","tan","carboxyl-terminal peptidase (DUF239);(source:Araport11)"]
["AT5G28430","tan","transposable_element_gene;(source:Araport11);similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G60930.2);(source:TAIR10)"]
["AT1G01830","tan","ARM repeat superfamily protein;(source:Araport11)"]
["AT1G72790","tan","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT5G51400","tan","PLAC8 family protein;(source:Araport11)"]
["AT5G61300","tan","hypothetical protein;(source:Araport11)"]
["AT2G01130","tan","DEA(D/H)-box RNA helicase family protein;(source:Araport11)"]
["AT1G80700","tan","stress response NST1-like protein;(source:Araport11)"]
["AT5G42110","tan","hypothetical protein;(source:Araport11)"]
["AT1G13930","tan","Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress. The mRNA is cell-to-cell mobile."]
["AT1G60230","tan","Radical SAM superfamily protein;(source:Araport11)"]
["AT1G34010","tan","hypothetical protein;(source:Araport11)"]
["AT2G31750","tan","Encodes an auxin glycosyltransferase that is likely to be involved in regulation of auxin by glycosylation."]
["AT1G67350","tan","NADH-ubiquinone oxidoreductase;(source:Araport11)"]
["AT1G76200","tan","NADH dehydrogenase ubiquinone 1 beta subcomplex subunit;(source:Araport11)"]
["AT2G42247","tan","Natural antisense transcript overlaps with AT2G42250;(source:Araport11)"]
["AT2G27950","tan","Ring/U-Box superfamily protein;(source:Araport11)"]
["AT4G11350","tan","transferring glycosyl group transferase (DUF604);(source:Araport11)"]
["AT3G11320","tan","Nucleotide-sugar transporter family protein;(source:Araport11)"]
["AT4G19160","tan","transglutaminase family protein;(source:Araport11)"]
["AT1G56000","tan","FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11)"]
["AT4G09250","tan","SPla/RYanodine receptor (SPRY) domain-containing protein;(source:Araport11)"]
["AT3G50340","tan","hypothetical protein;(source:Araport11)"]
["AT5G42320","tan","Zn-dependent exopeptidases superfamily protein;(source:Araport11)"]
["AT5G59410","tan","Rab5-interacting family protein;(source:Araport11)"]
["AT4G12990","tan","transmembrane protein;(source:Araport11)"]
["AT3G44630","tan","Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11)"]
["AT1G72340","tan","NagB/RpiA/CoA transferase-like superfamily protein;(source:Araport11)"]
["AT3G03250","tan","Is thought to encode a cytosolic UDP-glucose pyrophosphorylase with strong similarity to potato UTP--glucose-1-phosphate uridylyltransferase. Downregulated by flooding."]
["AT5G63990","tan","Inositol monophosphatase family protein;(source:Araport11)"]
["AT5G43430","tan","Encodes the electron transfer flavoprotein ETF beta, a putative subunit of the mitochondrial electron transfer flavoprotein complex (ETF alpha is At1g50940) in Arabidopsis. Mutations of the ETF beta gene result in accelerated senescence and early death compared to wild-type during extended darkness. Also involved in the catabolism of leucine and chlorophyll degradation pathway activated during darkness-induced carbohydrate deprivation."]
["AT2G03270","tan","DNA-binding protein;(source:Araport11)"]
["AT1G10850","tan","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT1G80800","tan","pseudogene of Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11)"]
["AT2G34090","tan","maternal effect embryo arrest 18;(source:Araport11)"]
["AT4G29480","tan","Mitochondrial ATP synthase subunit G protein;(source:Araport11)"]
["AT3G23600","tan","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT4G31340","tan","myosin heavy chain-like protein;(source:Araport11)"]
["AT1G27700","tan","Syntaxin/t-SNARE family protein;(source:Araport11)"]
["AT1G67190","tan","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT1G28100","tan","hypothetical protein;(source:Araport11)"]
["AT3G53240","tan","receptor like protein 45;(source:Araport11)"]
["AT3G48140","tan","B12D protein;(source:Araport11)"]
["AT4G39150","tan","DNAJ heat shock N-terminal domain-containing protein;(source:Araport11)"]
["AT4G10390","tan","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G61100","tan","disease resistance protein (TIR class);(source:Araport11)"]
["AT1G02010","tan","member of KEULE Gene Family"]
["AT1G74840","tan","Homeodomain-like superfamily protein;(source:Araport11)"]
["AT1G75460","tan","ATP-dependent protease La (LON) domain protein;(source:Araport11)"]
["AT3G62630","tan","stress response NST1-like protein (DUF1645);(source:Araport11)"]
["AT3G25400","tan","dCTP pyrophosphatase-like protein;(source:Araport11)"]
["AT3G45740","tan","hydrolase family protein / HAD-superfamily protein;(source:Araport11)"]
["AT1G56230","tan","enolase (DUF1399);(source:Araport11)"]
["AT2G39440","tan","ribonuclease H2 subunit C-like protein;(source:Araport11)"]
["AT2G38330","tan","MATE efflux family protein;(source:Araport11)"]
["AT2G20690","tan","A synthetic gene encoding the catalytic domain of the Arabidopsis thaliana gene At2g20690 was recombinant expressed in E. coli demonstrating the molecular function of riboflavin synthase. The mRNA is cell-to-cell mobile."]
["AT3G20820","tan","Leucine-rich repeat (LRR) family protein;(source:Araport11)"]
["AT1G53345","tan","DHHA1 domain protein;(source:Araport11)"]
["AT3G14240","tan","Subtilase family protein;(source:Araport11)"]
["AT3G59780","tan","Located in chloroplast, involved in calcium binding."]
["AT3G50550","tan","hypothetical protein;(source:Araport11)"]
["AT4G27700","tan","Rhodanese/Cell cycle control phosphatase superfamily protein;(source:Araport11)"]
["AT2G10940","tan","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)"]
["AT2G31490","tan","neuronal acetylcholine receptor subunit alpha-5;(source:Araport11)"]
["AT1G22510","tan","E3 ubiquitin-protein ligase RNF170-like protein (DUF 1232);(source:Araport11)"]
["AT2G19090","tan","DUF630 family protein (DUF630 and DUF632);(source:Araport11)"]
["AT5G67130","tan","PLC-like phosphodiesterases superfamily protein;(source:Araport11)"]
["AT3G27230","tan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT2G42320","tan","nucleolar protein gar2-like protein;(source:Araport11)"]
["AT3G28200","tan","Peroxidase superfamily protein;(source:Araport11)"]
["AT4G06701","tan","other_RNA;(source:Araport11)"]
["AT1G14460","tan","AAA-type ATPase family protein;(source:Araport11)"]
["AT3G15410","tan","Leucine-rich repeat (LRR) family protein;(source:Araport11)"]
["AT2G31300","tan","putative ARP2/3 protein complex subunit p41"]
["AT5G23890","tan","GPI-anchored adhesin-like protein;(source:Araport11)"]
["AT2G30950","tan","Metalloprotease that functions in thylakoid membrane biogenesis. Involved in the repair of PSII following damaged incurred during photoinhibition. Forms a complex with VAR1. Mutants show a variegated phenotype, which decreases during development. Transcript and protein levels increase with light intensity. In plsp1-1 mutant plastids, the nonmature form of the protein localizes in the membrane."]
["AT1G43580","tan","Sphingomyelin synthetase family protein;(source:Araport11)"]
["AT5G44660","tan","hypothetical protein;(source:Araport11)"]
["AT3G09035","tan","Concanavalin A-like lectin family protein;(source:Araport11)"]
["AT1G26550","tan","FKBP-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11)"]
["AT3G16565","tan","threonyl and alanyl tRNA synthetase second additional domain-containing protein;(source:Araport11)"]
["AT3G25410","tan","Sodium Bile acid symporter family;(source:Araport11)"]
["AT2G01180","tan","Encodes phosphatidate phosphatase. Up-regulated by genotoxic stress (gamma ray or UV-B) and elicitor treatments with mastoparan and harpin. Expressed in roots and leaves."]
["AT2G28605","tan","Encodes a PsbP domain-OEC23 like protein localized in thylakoid (peripheral-lumenal side)."]
["AT1G56720","tan","Protein kinase superfamily protein;(source:Araport11)"]
["AT5G26830","tan","Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion. The mRNA is cell-to-cell mobile."]
["AT1G59710","tan","actin cross-linking protein (DUF569);(source:Araport11)"]
["AT2G40660","tan","Nucleic acid-binding, OB-fold-like protein;(source:Araport11)"]
["AT2G32040","tan","The At2g32040 gene product has been demonstrated to mediate folate monoglutamate transport involved in tetrahydrofolate biosynthesis. It also mediates transport of antifolates, such as methotrexate and aminopterin. The gene is expressed in both chloroplast and non-green plastids."]
["AT3G05190","tan","D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein;(source:Araport11)"]
["AT2G42290","tan","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT5G27490","tan","Integral membrane Yip1 family protein;(source:Araport11)"]
["AT2G20790","tan","clathrin adaptor complexes medium subunit family protein;(source:Araport11)"]
["AT2G20420","tan","ATP citrate lyase (ACL) family protein;(source:Araport11)"]
["AT3G57785","tan","ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) protein;(source:Araport11)"]
["AT1G73390","tan","Endosomal targeting BRO1-like domain-containing protein;(source:Araport11)"]
["AT3G57930","tan","rho GTPase-activating gacO-like protein;(source:Araport11)"]
["AT5G61540","tan","N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11)"]
["AT5G50665","tan","hypothetical protein;(source:Araport11)"]
["AT2G02410","tan","yacP-like NYN domain protein;(source:Araport11)"]
["AT4G34150","tan","Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11)"]
["AT5G13520","tan","peptidase M1 family protein;(source:Araport11)"]
["AT4G39500","tan","cytochrome P450, family 96, subfamily A, polypeptide 11;(source:Araport11)"]
["AT5G43150","tan","elongation factor;(source:Araport11)"]
["AT1G20540","tan","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT4G38370","tan","Phosphoglycerate mutase family protein;(source:Araport11)"]
["AT4G16450","tan","NADH-ubiquinone oxidoreductase;(source:Araport11)"]
["AT2G25640","tan","SPOC domain / Transcription elongation factor S-II protein;(source:Araport11)"]
["AT3G15110","tan","transmembrane protein;(source:Araport11)"]
["AT5G62710","tan","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT5G12940","tan","Leucine-rich repeat (LRR) family protein;(source:Araport11)"]
["AT5G57330","tan","Galactose mutarotase-like superfamily protein;(source:Araport11)"]
["AT2G37500","tan","arginine biosynthesis protein ArgJ family;(source:Araport11)"]
["AT2G46780","tan","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT4G16695","tan","transmembrane protein;(source:Araport11)"]
["AT5G02830","tan","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G79210","tan","N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11)"]
["AT1G52720","tan","hypothetical protein;(source:Araport11)"]
["AT3G53540","tan","afadin;(source:Araport11)"]
["AT1G05870","tan","hypothetical protein (DUF1685);(source:Araport11)"]
["AT3G03010","tan","Peptidyl-tRNA hydrolase II (PTH2) family protein;(source:Araport11)"]
["AT1G75990","tan","PAM domain (PCI/PINT associated module) protein;(source:Araport11)"]
["AT1G49140","tan","NADH dehydrogenase ubiquinone 1 beta subcomplex subunit 10-B-like protein (Complex I subunit NDUFS6);(source:Araport11)"]
["AT3G57780","tan","nucleolar-like protein;(source:Araport11)"]
["AT3G04760","tan","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)"]
["AT5G53900","tan","Serine/threonine-protein kinase WNK (With No Lysine)-like protein;(source:Araport11)"]
["AT1G10160","tan","transposable_element_gene;(source:Araport11);non-LTR retrotransposon family (LINE), has a 3.9e-39 P-value blast match to GB:AAA67727 reverse transcriptase (LINE-element) (Mus musculus);(source:TAIR10)"]
["AT4G01040","tan","Glycosyl hydrolase superfamily protein;(source:Araport11)"]
["AT5G08570","tan","Pyruvate kinase family protein;(source:Araport11)"]
["AT1G21930","tan","transmembrane protein;(source:Araport11)"]
["AT3G01690","tan","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT3G21755","tan","Natural antisense transcript overlaps with AT3G21760;(source:Araport11)"]
["AT5G14285","tan","DNA-binding storekeeper;(source:Araport11)"]
["AT3G29375","tan","XH domain-containing protein;(source:Araport11)"]
["AT3G08610","tan","NADH dehydrogenase ubiquinone 1 alpha subcomplex subunit;(source:Araport11)"]
["AT5G43403","tan","other_RNA;(source:Araport11)"]
["AT2G04378","tan",0]
["AT2G42390","tan","kinase C substrate, heavy chain-like protein;(source:Araport11)"]
["AT1G01300","tan","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT3G61610","tan","Galactose mutarotase-like superfamily protein;(source:Araport11)"]
["AT5G12110","tan","elongation factor 1-beta 1;(source:Araport11)"]
["AT1G78040","tan","Pollen Ole e 1 allergen and extensin family protein;(source:Araport11)"]
["AT1G73740","tan","UDP-Glycosyltransferase superfamily protein;(source:Araport11)"]
["AT2G02510","tan","NADH dehydrogenase (ubiquinone)s;(source:Araport11)"]
["AT3G56830","tan","Similar in sequence to NPQ6 and NPQ7, but loss of function mutant does not exhibit a nonphotochemical quenching phenotype."]
["AT1G76660","tan","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT5G08010","tan","hypothetical protein;(source:Araport11)"]
["AT1G28150","tan","hypothetical protein;(source:Araport11)"]
["AT1G21480","tan","Exostosin family protein;(source:Araport11)"]
["AT2G20360","tan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT2G33390","tan","hypothetical protein;(source:Araport11)"]
["AT4G24810","tan","similar to ABC1 family protein, contains InterPro domain ABC1 protein (InterPro:IPR004147)"]
["AT5G62610","tan","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)"]
["AT2G33630","tan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT4G23470","tan","PLAC8 family protein;(source:Araport11)"]
["AT2G39280","tan","Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11)"]
["AT3G45730","tan","hypothetical protein;(source:Araport11)"]
["AT3G07810","tan","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT4G05090","tan","Inositol monophosphatase family protein;(source:Araport11)"]
["AT3G29280","tan","hypothetical protein;(source:Araport11)"]
["AT1G29980","tan","choice-of-anchor C domain protein, putative (Protein of unknown function, DUF642);(source:Araport11)"]
["AT1G51400","tan","Photosystem II 5 kD protein;(source:Araport11)"]
["AT5G48660","tan","B-cell receptor-associated protein 31-like protein;(source:Araport11)"]
["AT5G43020","tan","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT3G13190","tan","WEB family protein (DUF827);(source:Araport11)"]
["AT1G79080","tan","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT4G22235","tan","Encodes a defensin-like (DEFL) family protein."]
["AT4G04435","tan","Natural antisense transcript overlaps with AT4G03140;(source:Araport11)"]
["AT4G09970","tan","transmembrane protein;(source:Araport11)"]
["AT1G47278","tan","hypothetical protein;(source:Araport11)"]
["AT4G30760","tan","Putative endonuclease or glycosyl hydrolase;(source:Araport11)"]
["AT5G52010","tan","C2H2-like zinc finger protein;(source:Araport11)"]
["AT1G29470","tan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT2G02170","tan","Remorin family protein;(source:Araport11)"]
["AT2G42310","tan","ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) protein;(source:Araport11)"]
["AT5G47380","tan","electron transporter, putative (Protein of unknown function, DUF547);(source:Araport11)"]
["AT2G14460","tan","hypothetical protein;(source:Araport11)"]
["AT1G05835","tan","PhD finger protein."]
["AT5G25630","tan","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G33220","tan","GRIM-19 protein;(source:Araport11)"]
["AT4G39840","tan","cell wall integrity/stress response component-like protein;(source:Araport11)"]
["AT1G12500","tan","Nucleotide-sugar transporter family protein;(source:Araport11)"]
["AT1G31920","tan","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G47570","tan","NADH dehydrogenase ubiquinone 1 beta subcomplex subunit;(source:Araport11)"]
["AT4G27270","tan","Quinone reductase family protein;(source:Araport11)"]
["AT3G47570","tan","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT5G56350","tan","Pyruvate kinase family protein;(source:Araport11)"]
["AT5G02080","tan","phosphopantothenate-cysteine ligase-like protein;(source:Araport11)"]
["AT2G25480","tan","TPX2 (targeting protein for Xklp2) protein family;(source:Araport11)"]
["AT3G45850","tan","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT5G47890","tan","NADH-ubiquinone oxidoreductase B8 subunit;(source:Araport11)"]
["AT1G35340","tan","ATP-dependent protease La (LON) domain protein;(source:Araport11)"]
["AT1G69550","tan","disease resistance protein (TIR-NBS-LRR class);(source:Araport11)"]
["AT4G37432","tan","Natural antisense transcript overlaps with AT4G37430;(source:Araport11)"]
["AT5G49680","tan","Conserved among eukaryotes, similar to Arabidopsis SABRE. The phenotype of the kip/sab double mutant suggests related functions for both genes, however, the KIP protein is mostly required for tip-growth. Predicted to be targeted to the secretory pathway. mRNA was detected in all organs, with most abundance in pollen and roots."]
["AT2G21830","tan","Cysteine/Histidine-rich C1 domain family protein;(source:Araport11)"]
["AT1G07020","tan","hypothetical protein;(source:Araport11)"]
["AT2G43340","tan","hypothetical protein (DUF1685);(source:Araport11)"]
["AT3G16200","tan","DNA-directed RNA polymerase subunit beta;(source:Araport11)"]
["AT5G64180","tan","tropomyosin;(source:Araport11)"]
["AT5G50530","tan","CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein;(source:Araport11)"]
["AT3G15160","tan","AP-5 complex subunit zeta-1;(source:Araport11)"]
["AT5G12930","tan","inactive rhomboid protein;(source:Araport11)"]
["AT2G28360","tan","SIT4 phosphatase-associated family protein;(source:Araport11)"]
["AT1G69330","tan","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G29530","tan","hypothetical protein;(source:Araport11)"]
["AT5G03050","tan","knotted 1-binding protein;(source:Araport11)"]
["AT4G17260","tan","Lactate/malate dehydrogenase family protein;(source:Araport11)"]
["AT1G50660","tan","actin cytoskeleton-regulatory complex pan-like protein;(source:Araport11)"]
["AT2G36835","tan","hypothetical protein;(source:Araport11)"]
["AT3G56408","tan","Natural antisense transcript overlaps with AT3G56410;(source:Araport11)"]
["AT5G57840","tan","encodes a protein whose sequence is similar to anthranilate N-hydroxycinnamoyl/benzoyltransferase from Dianthus caryophyllus (gi:2239091)"]
["AT5G10320","tan","ATP synthase subunit B;(source:Araport11)"]
["AT5G17670","tan","Hydrolase (ECM2)"]
["AT5G24620","tan","Pathogenesis-related thaumatin superfamily protein;(source:Araport11)"]
["AT4G17650","tan","Polyketide cyclase / dehydrase and lipid transport protein;(source:Araport11)"]
["AT3G24255","tan","RNA-directed DNA polymerase (reverse transcriptase)-related family protein;(source:Araport11)"]
["AT3G62970","tan","zinc finger (C3HC4-type RING finger) family protein;(source:Araport11)"]
["AT4G09310","tan","SPla/RYanodine receptor (SPRY) domain-containing protein;(source:Araport11)"]
["AT1G44790","tan","ChaC-like family protein;(source:Araport11)"]
["AT3G51150","tan","ATP binding microtubule motor family protein;(source:Araport11)"]
["AT2G37930","tan","hypothetical protein (DUF3527);(source:Araport11)"]
["AT5G35180","tan","ENHANCED DISEASE RESISTANCE protein (DUF1336);(source:Araport11)"]
["AT1G35420","tan","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT2G40280","tan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT2G23910","tan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT1G09750","tan","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT5G25050","tan","Major facilitator superfamily protein;(source:Araport11)"]
["AT5G20660","tan","Zn-dependent exopeptidases superfamily protein;(source:Araport11)"]
["AT3G57320","tan","threonine-tRNA ligase 2;(source:Araport11)"]
["AT5G26622","tan","Beta-galactosidase related protein;(source:Araport11)"]
["AT2G29670","tan","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G27970","tan","ARM repeat superfamily protein;(source:Araport11)"]
["AT1G75560","tan","zinc knuckle (CCHC-type) family protein;(source:Araport11)"]
["AT5G44680","tan","DNA glycosylase superfamily protein;(source:Araport11)"]
["AT5G49100","tan","vitellogenin-like protein;(source:Araport11)"]
["AT2G01150","tan","Encodes a RING-H2 finger protein that is expressed in vascular tissue, root tips, embryos and pistils."]
["AT3G27570","tan","Sucrase/ferredoxin-like family protein;(source:Araport11)"]
["AT3G60980","tan","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT4G14100","tan","transferases, transferring glycosyl groups;(source:Araport11)"]
["AT2G25800","tan","elongation factor Ts (DUF810);(source:Araport11)"]
["AT3G45443","tan","hypothetical protein;(source:Araport11)"]
["AT5G63450","tan","AtWRKY33 regulates root apoplastic barrier formation by controlling AtCYP94B1 leading to increased salt tolerance of Arabidopsis plants. Regulation by WRKY33 to control apoplastic barrier formation in roots to confer salt tolerance."]
["AT1G63830","tan","PLAC8 family protein;(source:Araport11)"]
["AT4G08280","tan","Thioredoxin superfamily protein;(source:Araport11)"]
["AT4G35760","tan","Encodes a bimodular enzyme comprising an integral domain homologous to the catalytic subunit of mammalian vitamin K epoxide reductase (VKORC1, EC 1.1.4.1) that is fused to a soluble thioredoxin-like moiety. Using yeast microsomes as a recombinant system, it was shown that the VKORC1 domain of At4g35760 functions as a stringent naphthoquinone reductase, and that its reduced Trx-like partner can serve as its electron donor. Located in plastid. Required for the assembly of photosystem II. Can catalyze disulfide bond formation in vitro."]
["AT3G25680","tan","SLH domain protein;(source:Araport11)"]
["AT1G35220","tan","FAM91 carboxy-terminus protein;(source:Araport11)"]
["AT3G15530","tan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT5G66560","tan","Phototropic-responsive NPH3 family protein;(source:Araport11)"]
["AT5G21222","tan","protein kinase family protein;(source:Araport11)"]
["AT1G30000","tan","alpha-mannosidase 3;(source:Araport11)"]
["AT2G45990","tan","ribosomal RNA small subunit methyltransferase G;(source:Araport11)"]
["AT3G07320","tan","O-Glycosyl hydrolases family 17 protein;(source:Araport11)"]
["AT4G32390","tan","Nucleotide-sugar transporter family protein;(source:Araport11)"]
["AT4G00895","tan","ATPase, F1 complex, OSCP/delta subunit protein;(source:Araport11)"]
["AT5G15640","tan","Mitochondrial substrate carrier family protein;(source:Araport11)"]
["AT3G52990","tan","Pyruvate kinase family protein;(source:Araport11)"]
["AT2G25310","tan","ER membrane protein complex subunit-like protein (DUF2012);(source:Araport11)"]
["AT5G67150","tan","HXXXD-type acyl-transferase family protein;(source:Araport11)"]
["AT1G15410","tan","aspartate-glutamate racemase family;(source:Araport11)"]
["AT5G44600","tan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT1G70100","tan","neurofilament heavy protein;(source:Araport11)"]
["AT1G47670","tan","Transmembrane amino acid transporter family protein;(source:Araport11)"]
["AT3G07510","tan","maternal effect embryo arrest protein;(source:Araport11)"]
["AT2G17340","tan","pantothenate kinase;(source:Araport11)"]
["AT5G23760","tan","Copper transport protein family;(source:Araport11)"]
["AT1G01630","tan","Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11)"]
["AT2G42130","tan","Plastid-lipid associated protein PAP / fibrillin family protein;(source:Araport11)"]
["AT5G24750","tan","UDP-Glycosyltransferase superfamily protein;(source:Araport11)"]
["AT3G27906","tan","hypothetical protein;(source:Araport11)"]
["AT4G21910","tan","MATE efflux family protein;(source:Araport11)"]
["AT4G23420","tan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT4G19450","tan","Major facilitator superfamily protein;(source:Araport11)"]
["AT5G26710","tan","Glutamyl/glutaminyl-tRNA synthetase, class Ic;(source:Araport11)"]
["AT5G57270","tan","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT4G09670","tan","Oxidoreductase family protein;(source:Araport11)"]
["AT5G10620","tan","methyltransferase;(source:Araport11)"]
["AT2G38970","tan","Zinc finger (C3HC4-type RING finger) family protein;(source:Araport11)"]
["AT3G28480","tan","Oxoglutarate/iron-dependent oxygenase;(source:Araport11)"]
["AT4G19550","tan","zinc ion binding / transcription regulator;(source:Araport11)"]
["AT3G16750","tan","hypothetical protein;(source:Araport11)"]
["AT2G21860","tan","Violaxanthin de-epoxidase located in chloroplast."]
["AT1G50575","tan","Putative lysine decarboxylase family protein;(source:Araport11)"]
["AT1G52590","tan","Putative thiol-disulfide oxidoreductase DCC;(source:Araport11)"]
["AT1G05205","tan","hexokinase-1 protein;(source:Araport11)"]
["AT5G50565","tan","hypothetical protein;(source:Araport11)"]
["AT5G58480","tan","O-Glycosyl hydrolases family 17 protein;(source:Araport11)"]
["AT5G17610","tan","hypothetical protein;(source:Araport11)"]
["AT5G39340","tan","Encodes AHP3, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs) involved in Histidine (His)-to-Aspartate (Asp) phosphorelay signal transduction. AHPs function as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6)."]
["AT3G14790","tan","rhamnose biosynthesis 3;(source:Araport11)"]
["AT3G13410","tan","2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase;(source:Araport11)"]
["AT1G53030","tan","encodes a copper chaperone, can functional complements the yeast COX17 null mutant. May play a role in the delivery of copper to mitochondria. Expressed in roots and thus may also play a role in copper transport in the roots."]
["AT3G02700","tan","NC domain-containing protein-like protein;(source:Araport11)"]
["AT3G49550","tan","hypothetical protein;(source:Araport11)"]
["AT4G35850","tan","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G18940","tan","Mo25 family protein;(source:Araport11)"]
["AT3G20260","tan","DUF1666 family protein (DUF1666);(source:Araport11)"]
["AT5G02650","tan","hypothetical protein;(source:Araport11)"]
["AT2G23330","tan","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 3.9e-195 P-value blast match to GB:AAA57005 Hopscotch polyprotein (Ty1_Copia-element) (Zea mays);(source:TAIR10)"]
["AT5G08510","tan","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G20440","tan","Ypt/Rab-GAP domain of gyp1p superfamily protein;(source:Araport11)"]
["AT4G01050","tan","hydroxyproline-rich glycoprotein family protein, contains a rhodanese homology domain. Required for anchoring the FNR flavoenzyme to the thylakoid membranes and sustaining high efficiency photosynthetic linear electron flow.The mRNA is cell-to-cell mobile."]
["AT4G21105","tan","cytochrome-c oxidase/ electron carrier;(source:Araport11)"]
["AT2G41050","tan","PQ-loop repeat family protein / transmembrane family protein;(source:Araport11)"]
["AT5G50640","tan","CBS/octicosapeptide/phox/Bemp1 domain protein;(source:Araport11)"]
["AT5G44730","tan","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)"]
["AT4G19070","tan","Putative membrane lipoprotein;(source:Araport11)"]
["AT2G03420","tan","hypothetical protein;(source:Araport11)"]
["AT1G77350","tan","keratinocyte-associated-like protein;(source:Araport11)"]
["AT4G13615","tan","Uncharacterized protein family SERF;(source:Araport11)"]
["AT2G03750","tan","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT5G41620","tan","intracellular protein transporter USO1-like protein;(source:Araport11)"]
["AT3G58975","tan","pseudogene of F-box family protein"]
["AT2G34020","tan","Calcium-binding EF-hand family protein;(source:Araport11)"]
["AT3G09580","tan","Oxidoreductase located in chloroplast."]
["AT1G50630","tan","extracellular ligand-gated ion channel protein (DUF3537);(source:Araport11)"]
["AT3G25120","tan","Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein;(source:Araport11)"]
["AT5G03230","tan","senescence regulator (Protein of unknown function, DUF584);(source:Araport11)"]
["AT5G57150","tan","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)"]
["AT1G56700","tan","Peptidase C15, pyroglutamyl peptidase I-like protein;(source:Araport11)"]
["AT3G63445","tan","Natural antisense transcript overlaps with AT3G63440;(source:Araport11)"]
["AT3G43810","tan","EF hand domain protein encodes a calmodulin. Can functionally complement a yeast CaM mutant. Unique member of the CAM family that works as a transcription factor in light signaling pathways; works in concert with CONSTITUTIVE PHOTOMORPHOGENIC 1 and ELONGATED HYPOCOTYL 5, and plays an important role in seedling development; involved in the regulation of the activity of various Ca2+-gated channels such as cyclic nucleotide gated channel 6 (CNGC6), CNGC14 and auto-inhibited Ca2+ ATPase 8."]
["AT2G32520","tan","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT5G52840","tan","NADH-ubiquinone oxidoreductase-like protein;(source:Araport11)"]
["AT2G02050","tan","NADH-ubiquinone oxidoreductase B18 subunit;(source:Araport11)"]
["AT4G17910","tan","transferases, transferring acyl groups;(source:Araport11)"]
["AT4G01935","tan","insulin-induced protein;(source:Araport11)"]
["AT3G53580","tan","diaminopimelate epimerase family protein;(source:Araport11)"]
["AT3G06450","tan","HCO3- transporter family;(source:Araport11)"]
["AT1G79060","tan","TPRXL;(source:Araport11)"]
["AT2G24280","tan","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT1G71070","tan","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT4G28060","tan","Cytochrome c oxidase, subunit Vib family protein;(source:Araport11)"]
["AT5G19110","tan","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT3G17780","tan","B-cell receptor-associated-like protein;(source:Araport11)"]
["AT5G08410","tan","ferredoxin/thioredoxin reductase subunit A (variable subunit) 2;(source:Araport11)"]
["AT1G02180","tan","ferredoxin-like protein;(source:Araport11)"]
["AT5G01430","tan","Got1/Sft2-like vescicle transport protein family;(source:Araport11)"]
["AT1G55840","tan","Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11)"]
["AT4G26550","tan","Got1/Sft2-like vescicle transport protein family;(source:Araport11)"]
["AT4G14420","tan","HR-like lesion-inducing protein-like protein;(source:Araport11)"]
["AT1G17830","tan","hypothetical protein (DUF789);(source:Araport11)"]
["AT2G40935","tan","PLAC8 family protein;(source:Araport11)"]
["AT4G31350","tan","Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT1G29840","tan","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT5G13140","tan","Pollen Ole e 1 allergen and extensin family protein;(source:Araport11)"]
["AT3G62790","tan","NADH-ubiquinone oxidoreductase-like protein;(source:Araport11)"]
["AT2G16405","tan","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT4G36970","tan","Remorin family protein;(source:Araport11)"]
["AT5G61865","tan","hypothetical protein;(source:Araport11)"]
["AT4G38950","tan","ATP binding microtubule motor family protein;(source:Araport11)"]
["AT1G63220","tan","Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11)"]
["AT3G10405","tan","vacuolar acid trehalase;(source:Araport11)"]
["AT1G52420","tan","UDP-Glycosyltransferase superfamily protein;(source:Araport11)"]
["AT5G08300","tan","Succinyl-CoA ligase, alpha subunit;(source:Araport11)"]
["AT1G56423","tan","hypothetical protein;(source:Araport11)"]
["AT5G19120","tan","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT5G24170","tan","Got1/Sft2-like vescicle transport protein family;(source:Araport11)"]
["AT3G05900","tan","neurofilament protein-like protein;(source:Araport11)"]
["AT3G03160","tan","B-cell receptor-associated-like protein;(source:Araport11)"]
["AT3G62360","tan","Carbohydrate-binding-like fold;(source:Araport11)"]
["AT3G23300","tan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT5G64460","tan","Phosphoglycerate mutase family protein;(source:Araport11)"]
["AT3G46540","tan","ENTH/VHS family protein;(source:Araport11)"]
["AT3G47490","tan","HNH endonuclease;(source:Araport11)"]
["AT1G51650","tan","ATP synthase epsilon chain;(source:Araport11)"]
["AT4G27840","tan","SNARE-like superfamily protein;(source:Araport11)"]
["AT5G26960","tan","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT1G72410","tan","COP1-interacting protein-like protein;(source:Araport11)"]
["AT1G14710","tan","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT3G49420","tan","Got1/Sft2-like vescicle transport protein family;(source:Araport11)"]
["AT4G29360","tan","O-Glycosyl hydrolases family 17 protein;(source:Araport11)"]
["AT5G20060","tan","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT3G09800","tan","SNARE-like superfamily protein;(source:Araport11), similar to yeast RET3."]
["AT4G39860","tan","hematological/neurological-like protein;(source:Araport11)"]
["AT2G20724","tan","Annotated as pseudogene of unknown protein.Possibly not a pseudogene based on evidence for transcription (RNA-seq) and translation (Ribo-seq) described in PMID:27791167 ."]
["AT3G45930","tan","Histone superfamily protein;(source:Araport11)"]
["AT3G20350","tan","actin cytoskeleton-regulatory complex pan-like protein;(source:Araport11)"]
["AT4G38290","tan","hemolysin-III related integral membrane protein;(source:Araport11)"]
["AT5G15025","tan","paired amphipathic helix Sin3-like protein;(source:Araport11)"]
["AT3G10860","tan","Cytochrome b-c1 complex, subunit 8 protein;(source:Araport11)"]
["AT3G44150","tan","Expp1 protein;(source:Araport11)"]
["AT1G44920","tan","Membrane protein (ECM2) expressed during early development, located in chloroplast."]
["AT1G76450","tan","Photosystem II reaction center PsbP family protein;(source:Araport11)"]
["AT2G37100","tan","protamine P1 family protein;(source:Araport11)"]
["AT5G15220","tan","Ribosomal protein L27 family protein;(source:Araport11)"]
["AT5G18150","tan","Methyltransferase-related protein;(source:Araport11)"]
["AT4G24930","tan","thylakoid lumenal 17.9 kDa protein, chloroplast;(source:Araport11)"]
["AT3G50520","tan","Phosphoglycerate mutase family protein;(source:Araport11)"]
["AT1G56020","tan","serine/arginine repetitive matrix-like protein;(source:Araport11)"]
["AT3G14172","tan","GPI-anchored adhesin-like protein;(source:Araport11)"]
["AT3G47000","tan","Glycosyl hydrolase family protein;(source:Araport11)"]
["AT4G32420","tan","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11)"]
["AT2G02400","tan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT2G43640","tan","Signal recognition particle, SRP9/SRP14 subunit;(source:Araport11)"]
["AT5G48790","tan","Low PSII Accu (ECM1) involved in photosynthesis."]
["AT5G43910","tan","pfkB-like carbohydrate kinase family protein;(source:Araport11)"]
["AT3G21055","tan","Encodes photosystem II 5 kD protein subunit PSII-T. This is a nuclear-encoded gene (PsbTn) which also has a plastid-encoded paralog (PsbTc)."]
["AT3G25030","tan","RING/U-box superfamily protein;(source:Araport11)"]
["AT3G52500","tan","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT4G28180","tan","hypothetical protein;(source:Araport11)"]
["AT1G74456","tan","snoRNA;(source:Araport11)"]
["AT3G47590","tan","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT4G25570","tan","Encodes cytochrome b561."]
["AT3G42670","tan","Encodes a nuclear localized SNF domain containing protein involved in RNA silencing. Mutants were identified in a screen for defects in the spread of RNA silencing. CLSY1 may affect production of dsRNA from the locus to be silenced. Locus-specific regulator of 24nt-siRNA expression, works together with CLSY2-4 as the master regulators of essentially all Pol-IV-dependent 24nt-siRNAs."]
["AT1G02270","tan","Calcium-binding endonuclease/exonuclease/phosphatase family;(source:Araport11)"]
["AT2G03240","tan","EXS (ERD1/XPR1/SYG1) family protein;(source:Araport11)"]
["AT4G32030","tan","hypothetical protein;(source:Araport11)"]
["AT1G71220","tan","Encodes UDP-glucose:glycoprotein glucosyltransferase. Non-receptor component required for EFR-mediated immunity. Mutants show de-repressed anthocyanin accumulation in the presence of elf18, and EFR accumulation and signalling."]
["AT5G04020","tan","calmodulin binding protein;(source:Araport11)"]
["AT2G32970","tan","G1/S-specific cyclin-E protein;(source:Araport11)"]
["AT5G60680","tan","transcription initiation factor TFIID subunit (Protein of unknown function, DUF584);(source:Araport11)"]
["AT4G32470","tan","Cytochrome bd ubiquinol oxidase, 14kDa subunit;(source:Araport11)"]
["AT5G24830","tan","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G64580","tan","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G16350","tan","O-acyltransferase (WSD1-like) family protein;(source:Araport11)"]
["AT1G53710","tan","Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11)"]
["AT4G01460","tan","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)"]
["AT2G20515","tan","pollen Ole e I family allergen protein;(source:Araport11)"]
["AT4G13100","tan","RING/U-box superfamily protein;(source:Araport11)"]
["AT2G31560","tan","signal transducer/transcription protein, putative (DUF1685);(source:Araport11)"]
["AT5G13410","tan","FKBP-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11)"]
["AT1G66820","tan","glycine-rich protein;(source:Araport11)"]
["AT1G20430","tan","hypothetical protein;(source:Araport11)"]
["AT1G21740","tan","DUF630 family protein, putative (DUF630 and DUF632);(source:Araport11)"]
["AT5G24260","tan","prolyl oligopeptidase family protein;(source:Araport11)"]
["AT4G24805","tan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT5G18520","tan","Encodes a candidate G-protein Coupled Receptor that is involved in the regulation of root growth by bacterial N-acyl-homoserine lactones (AHLs) and plays a role in mediating interactions between plants and microbes. The mRNA is cell-to-cell mobile.","(7TM1)","(7TM1);CANDIDATE G-PROTEIN COUPLED RECEPTOR 7 (CAND7)"]
["AT2G01070","tan","Seven transmembrane domain-containing protein that along with 7TM1, interacts with G-coupled protein receptor components and functions in protein trafficking of cellulose synthase to the plasma membrane.","(7TM5)","(7TM5)"]
["AT1G07810","tan","Encodes an ER-type Ca2+-pumping ATPase. The mRNA is cell-to-cell mobile.","ER-TYPE CA2+-ATPASE 1 (ECA1)","(ACA3);ER-TYPE CA2+-ATPASE 1 (ECA1);ARABIDOPSIS THALIANA ER-TYPE CA2+-ATPASE 1 (ATECA1)"]
["AT3G57870","tan","Encodes a SUMO ligase that directs the attachment of the small protein SUMO to target proteins via an isopeptide bond. This enzyme is localized to the nucleus and plants with reduced levels of this protein show higher sensitivity to ABA in root growth inhibition assays. It has high similarity to the yeast UBC9 SUMO ligase and is sometimes referred to by that name.","SUMO CONJUGATION ENZYME 1 (SCE1)","(AHUS5);EMBRYO DEFECTIVE 1637 (EMB1637);SUMO CONJUGATION ENZYME 1 (SCE1);SUMO CONJUGATING ENZYME 1A (SCE1A);SUMO CONJUGATION ENZYME 1 (ATSCE1)"]
["AT5G14060","tan","lysine-sensitive aspartate kinase","(CARAB-AK-LYS)","(AK2); (CARAB-AK-LYS)"]
["AT4G00370","tan","Encodes an inorganic phosphate transporter (PHT4;4) that can transport ascorbate and is located in the chloroplast envelope membrane. It has been shown to play a role in the xanthophyll cycle during photosynthesis and may be required for tolerance to strong light stress.","(ANTR2)","(ANTR2);ANION TRANSPORTER 2 (PHT4;4); (ATPHT4;4)"]
["AT4G11380","tan","Part of adaptor protein (AP) complex which mediadates clathrin-dependent trafficking at the trans-Golgi network (TGN) and the plasma membrane, respectively. Required for trafficking to plasma membrane and vacuoles.","(AP1/2&#946;1)","(AP1/2&#946;1)"]
["AT1G49050","tan","Encodes a member of the aspartyl protease family. Interacts with BAGP1 and BAG6 and appears to be required for cleavage of BAG6 as BAG6 is not cleaved in APCB1 mutant backgrounds.","(APCB1)","(APCB1)"]
["AT1G07570","tan","Protein kinase capable of phosphorylating tyrosine, serine, and threonine residues","(APK1A)","(APK1A);PBS1-LIKE 9 (PBL9)"]
["AT4G39210","tan","Encodes the large subunit of ADP-Glucose Pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL3 is the major large subunit isoform present in inflorescences, fruits and roots.","(APL3)","(APL3)"]
["AT1G19920","tan","encodes a chloroplast form of ATP sulfurylase.","(APS2)","(APS2);ATP SULFURYLASE ARABIDOPSIS 1 (ASA1); (ATPS2)"]
["AT5G43780","tan","sulfate adenylyltransferase, ATP sulfurylase","(APS4)","(APS4); (ATPS4)"]
["AT3G46060","tan","small GTP-binding protein (ara-3) The mRNA is cell-to-cell mobile.","(RABE1c)","(ARA3); (ARA-3); (ATRABE1C);RAB GTPASE HOMOLOG 8A (ATRAB8A);RAB GTPASE HOMOLOG 8A (RAB8A); (RABE1c)"]
["AT3G19180","tan","Encodes a chloroplast division factor located in the plastid inner envelope with its N-terminus exposed to the stroma. PARC6 influences FtsZ assembly and is required for recruitment of PDV1 during chloroplast division.","PARALOG OF ARC6 (PARC6)","(ARC6H);PARALOG OF ARC6 (PARC6);A. THALIANA CHLOROPLAST DIVISION SITE POSITIONING 1 (ATCDP1);CHLOROPLAST DIVISION SITE POSITIONING 1 (CDP1)"]
["AT5G43850","tan","RmlC-like cupins superfamily protein;(source:Araport11)","(ARD4)","(ARD4); (ATARD4)"]
["AT2G47170","tan","Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. Members of this family are known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. The mRNA is cell-to-cell mobile.","(ARF1A1C)","(ARF1A1C);BFA-VISUALIZED EXOCYTIC TRAFFICKING DEFECTIVE 1 (BEX1)"]
["AT1G17840","tan","Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix. The mRNA is cell-to-cell mobile.","ATP-BINDING CASSETTE G11 (ABCG11)","(AtABCG11);ARABIDOPSIS THALIANA WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11 (ATWBC11);CUTICULAR DEFECT AND ORGAN FUSION 1 (COF1);DESPERADO (DSO);WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11 (WBC11);ATP-BINDING CASSETTE G11 (ABCG11)"]
["AT3G17790","tan","Expression is upregulated in the shoot of cax1/cax3 mutant and is responsive to phosphate (Pi) and not phosphite (Phi) in roots and shoots.","PURPLE ACID PHOSPHATASE 17 (PAP17)","(ATACP5); (ATPAP17);PURPLE ACID PHOSPHATASE 17 (PAP17)"]
["AT5G11740","tan","Encodes arabinogalactan protein (AGP15). The mRNA is cell-to-cell mobile.","ARABINOGALACTAN PROTEIN 15 (AGP15)","(ATAGP15);ARABINOGALACTAN PROTEIN 15 (AGP15)"]
["AT5G65020","tan","Annexins are calcium binding proteins that are localized in the cytoplasm. When cytosolic Ca2+ increases, they relocate to the plasma membrane. They may be involved in the Golgi-mediated secretion of polysaccharides.","ANNEXIN 2 (ANNAT2)","(ATANN2);ANNEXIN 2 (ANNAT2)"]
["AT1G70490","tan","A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.","(ARFA1D)","(ATARFA1D); (ARFA1D)"]
["AT5G65990","tan","Transmembrane amino acid transporter family protein;(source:Araport11)","(ATAVT3)","(ATAVT3)"]
["AT1G80510","tan","Encodes a close relative of the amino acid transporter ANT1 (AT3G11900), involved in response to abiotic stress.","(ATAVT6E)","(ATAVT6E)"]
["AT5G53560","tan","Encodes a cytochrome b5 isoform that can be reduced by AtCBR, a cytochrome b5 reductase.","CYTOCHROME B5 ISOFORM E (CB5-E)","(ATB5-A);CYTOCHROME B5 ISOFORM E (CB5-E);ARABIDOPSIS CYTOCHROME B5 ISOFORM E (ATCB5-E); (B5 #2)"]
["AT4G20840","tan","Encodes an oligogalacturonide oxidase that inactivates the elicitor-active oligogalacturonides (OGs).","(ATBBE21)","(ATBBE21);OLIGOGALACTURONIDE OXIDASE 2 (OGOX2)"]
["AT1G51160","tan","TRAPP protein BET5 homolog.","(ATBET5)","(ATBET5); (BET5)"]
["AT2G35430","tan","Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11)","(ATC3H28)","(ATC3H28)"]
["AT2G47680","tan","zinc finger (CCCH type) helicase family protein;(source:Araport11)","(ATC3H31)","(ATC3H31)"]
["AT3G06410","tan","Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11)","(ATC3H34)","(ATC3H34)"]
["AT5G12440","tan","CCCH-type zinc fingerfamily protein with RNA-binding domain-containing protein;(source:Araport11)","(ATC3H55)","(ATC3H55)"]
["AT4G39330","tan","Member of a family of cinnamyl alcohol dehydrogenases (CAD) that normally catalyze the last steps of monolignol biosynthesis however the catalytic activity for this putative CAD has not been demonstrated. Expressed predominantly in lignified tissues.","CINNAMYL ALCOHOL DEHYDROGENASE 9 (CAD9)","(ATCAD9);CINNAMYL ALCOHOL DEHYDROGENASE 9 (CAD9)"]
["AT5G62410","tan","SMC2-1 (SMC2)","STRUCTURAL MAINTENANCE OF CHROMOSOMES 2 (SMC2)","(ATCAP-E1);TITAN 3 (TTN3);STRUCTURAL MAINTENANCE OF CHROMOSOMES 2 (SMC2); (ATSMC4)"]
["AT5G36940","tan","Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs.","CATIONIC AMINO ACID TRANSPORTER 3 (CAT3)","(ATCAT3);CATIONIC AMINO ACID TRANSPORTER 3 (CAT3)"]
["AT4G01610","tan","Encodes a capase involved in stress induced cell death. Activity detected in leaf and cell culture.","(ATCATHB3)","(ATCATHB3)"]
["AT2G46830","tan","Encodes a transcriptional repressor that performs overlapping functions with LHY in a regulatory feedback loop that is closely associated with the circadian oscillator of Arabidopsis. Binds to the evening element in the promoter of TOC1 and represses TOC1 transcription. CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis. CCA1 binds the GI promoter.","CIRCADIAN CLOCK ASSOCIATED 1 (CCA1)","(AtCCA1);CIRCADIAN CLOCK ASSOCIATED 1 (CCA1)"]
["AT1G30450","tan","member of Cation-chloride co-transporter family","CATION-CHLORIDE CO-TRANSPORTER 1 (CCC1)","(ATCCC1);HAPLESS 5 (HAP5);CATION-CHLORIDE CO-TRANSPORTER 1 (CCC1)"]
["AT1G77710","tan","ubiquitin-fold modifier;(source:Araport11)","CONSERVED IN CILIATED SPECIES AND IN THE LAND PLANTS 2 (CCP2)","(ATCCP2);CONSERVED IN CILIATED SPECIES AND IN THE LAND PLANTS 2 (CCP2)"]
["AT5G49890","tan","member of Anion channel protein family","CHLORIDE CHANNEL C (CLC-C)","(ATCLC-C);CHLORIDE CHANNEL C (CLC-C)"]
["AT5G37770","tan","Encodes a protein with 40% similarity to calmodulin. Binds Ca(2+) and, as a consequence, undergoes conformational changes. CML24 expression occurs in all major organs, and transcript levels are increased from 2- to 15-fold in plants subjected to touch, darkness, heat, cold, hydrogen peroxide, abscisic acid (ABA), and indole-3-acetic acid. However, CML24 protein accumulation changes were not detectable. The putative CML24 regulatory region confers reporter expression at sites of predicted mechanical stress; in regions undergoing growth; in vascular tissues and various floral organs; and in stomata, trichomes, and hydathodes. CML24-underexpressing transgenics are resistant to ABA inhibition of germination and seedling growth, are defective in long-day induction of flowering, and have enhanced tolerance to CoCl(2), molybdic acid, ZnSO(4), and MgCl(2). Also regulates nitric oxide levels.","TOUCH 2 (TCH2)","(ATCML24);TOUCH 2 (TCH2);CALMODULIN-LIKE 24 (CML24)"]
["AT5G03760","tan","encodes a beta-mannan synthase that is required for agrobacterium-mediated plant genetic transformation involves a complex interaction between the bacterium and the host plant. 3' UTR is involved in transcriptional regulation and the gene is expressed in the elongation zone of the root.","(ATCSLA09)","(ATCSLA09); (CSLA09);RESISTANT TO AGROBACTERIUM TRANSFORMATION 4 (RAT4);CELLULOSE SYNTHASE LIKE A9 (CSLA9); (ATCSLA9)"]
["AT3G07330","tan","encodes a XyG glucan synthase; gene similar to cellulose synthase","CELLULOSE-SYNTHASE-LIKE C6 (CSLC6)","(ATCSLC06);CELLULOSE-SYNTHASE LIKE C6 (CSLC06);CELLULOSE-SYNTHASE-LIKE C6 (ATCSLC6);CELLULOSE-SYNTHASE-LIKE C6 (CSLC6)"]
["AT4G39980","tan","Encodes a 2-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, which catalyzes the first committed step in aromatic amino acid biosynthesis. Gene expression is induced by wounding and pathogenic bacteria Pseudomonas syringae. The mRNA is cell-to-cell mobile.","3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1 (DHS1)","(ATDAHP1);3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1 (DHS1);3-DEOXY-D-ARABINO-HEPTULOSONATE-7-PHOSPHATE 1 (DAHP1)"]
["AT1G08500","tan","early nodulin-like protein 18;(source:Araport11)","EARLY NODULIN-LIKE PROTEIN 18 (ENODL18)","(AtENODL18);EARLY NODULIN-LIKE PROTEIN 18 (ENODL18)"]
["AT4G21180","tan","J domain protein localized in ER membrane.","(ATERDJ2B)","(ATERDJ2B)"]
["AT3G25150","tan","Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11)","(ATG3BP6)","(ATG3BP6); (ATG3BP-3)"]
["AT2G01170","tan","Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys, GABA but not pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.","BIDIRECTIONAL AMINO ACID TRANSPORTER 1 (BAT1)","(ATGABP);GABA PERMEASE (GABP);BIDIRECTIONAL AMINO ACID TRANSPORTER 1 (BAT1)"]
["AT1G27440","tan","IRX10 was identified as MUCI69 in a reverse genetic screen for MUCILAGE-RELATED genes. Mutations in this gene did not disrupt mucilage properties, likely due to the presence of the functionally redundant IRX10-L.","(GUT2)","(ATGUT1); (IRX10); (GUT2)"]
["AT1G52150","tan","Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation.","(ATHB-15)","(ATHB-15); (HB15); (ATHB15);CORONA (CNA);INCURVATA 4 (ICU4)"]
["ATCG00480","tan","chloroplast-encoded gene for beta subunit of ATP synthase","ATP SYNTHASE SUBUNIT BETA (PB)","(ATHCF1BETA); (CF1BETA);ATP SYNTHASE SUBUNIT BETA (ATPB);ATP SYNTHASE SUBUNIT BETA (PB)"]
["AT5G02260","tan","member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)","EXPANSIN A9 (EXPA9)","(ATHEXP ALPHA 1.10);EXPANSIN A9 (EXPA9); (ATEXP9); (EXP9);EXPANSIN A9 (ATEXPA9)"]
["AT4G03520","tan","Encodes a redox activated co-chaperone, chloroplast localized thioredoxin, similar to prokaryotic types.","(ATHM2)","(ATHM2);THIOREDOXIN M2 (TRXM2)"]
["AT3G15360","tan","encodes a prokaryotic thioredoxin The mRNA is cell-to-cell mobile.","THIOREDOXIN M-TYPE 4 (TRX-M4)","(ATHM4);ARABIDOPSIS THALIANA MYOSIN 4 (ATM4);THIOREDOXIN M-TYPE 4 (TRX-M4);ARABIDOPSIS THIOREDOXIN M-TYPE 4 (ATM4)"]
["AT2G43910","tan","HARMLESS TO OZONE LAYER 1;(source:Araport11)","HARMLESS TO OZONE LAYER 1 (HOL1)","(ATHOL1);HARMLESS TO OZONE LAYER 1 (HOL1)"]
["AT1G46264","tan","Encodes SCHIZORIZA, a member of Heat Shock Transcription Factor (Hsf) family. Functions as a nuclear factor regulating asymmetry of stem cell divisions.","HEAT SHOCK TRANSCRIPTION FACTOR B4 (HSFB4)","(AT-HSFB4);HEAT SHOCK TRANSCRIPTION FACTOR B4 (HSFB4);SCHIZORIZA (SCZ)"]
["AT4G16480","tan","Encodes a high affinity H+:<i>myo</i>-inositol symporter. The only other compound shown to be transported was pinitol, a methylated derivative of <i>myo</i>-inositol. The mRNA is cell-to-cell mobile.","INOSITOL TRANSPORTER 4 (INT4)","(ATINT4);INOSITOL TRANSPORTER 4 (INT4)"]
["AT4G09020","tan","Encodes an isoamylase-like protein. Mutant studies show that the gene is strongly involved in starch breakdown. A GUS-protein fusion product was shown to localize to the surface of chloroplastic structures reminiscent of starch granules. In the mutants, the chloroplastic &#945;-amylase AMY3 is upregulated. The mRNA is cell-to-cell mobile.","ISOAMYLASE 3 (ISA3)","(ATISA3);ISOAMYLASE 3 (ISA3)"]
["AT1G79500","tan","Encodes a protein with 3-deoxy-8-phosphooctulonate synthase (KDOP synthase) activity which is involved in the biosynthesis of KDO, a component of cell wall rhamnogalacturonan II.","(AtkdsA1)","(AtkdsA1); (ATKDO8PS);3-DEOXY-D-MANNO-OCTULOSONATE 8-PHOSPHATE SYNTHASE (KDO8PS)"]
["AT1G16340","tan","Encodes a protein with putative 3-deoxy-D-manno-octulosonic acid 8-phosphate synthetase activity. This gene share a very high sequence homology with its homologue AtkdsA1 (AT1G79500).","(ATKDSA2)","(ATKDSA2); (ATKDO8PS)"]
["AT2G25910","tan","3-5 exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein;(source:Araport11)","(ATKH7)","(ATKH7)"]
["AT1G51940","tan","Encodes a LysM-containing receptor-like kinase. Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant. Based on protein sequence alignment analysis, it has a typical RD signaling domain in its catalytic loop and possesses autophosphorylation activity.It is required for the suppression of defense responses in absence of pathogen infection or upon abscisic acid treatment. Loss-of-function mutants display enhanced resistance to Botrytis cinerea and Pectobacterium carotovorum. Its expression is repressed by pathogen infection and biological elicitors and is induced abscisic acid.Expression is strongly repressed by elicitors and fungal infection, and is induced by the hormone abscisic acid (ABA). Insertional mutants show increased expression of PHYTOALEXIN-DEFICIENT 3 (PAD3), enhanced resistance to Botrytis cinerea and Pectobacterium carotovorum infection and reduced physiological responses to ABA, suggesting that LYK3 is important for the cross-talk between signaling pathways activated by ABA and pathogens (PMID:24639336).","LYSM-CONTAINING RECEPTOR-LIKE KINASE 3 (LYK3)","(ATLYK3);LYSM-CONTAINING RECEPTOR-LIKE KINASE 3 (LYK3)"]
["AT3G28860","tan","Encodes a member of the ATP-binding cassette (ABC) transporter family that is involved in auxin transport and is involved in postembryonic organ separation. Also known as AtMDR11 and PGP19. Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Acts upstream of phyA in regulating hypocotyl elongation and gravitropic response. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AtPGP1.","ATP-BINDING CASSETTE B19 (ABCB19)","(ATMDR1); (MDR11);ARABIDOPSIS THALIANA ATP-BINDING CASSETTE B19 (ATABCB19);ATP-BINDING CASSETTE B19 (ABCB19); (ATPGP19); (MDR1);P-GLYCOPROTEIN 19 (PGP19);MULTIDRUG RESISTANCE PROTEIN 11 (ATMDR11)"]
["AT5G20090","tan","MPC1 negatively regulates ABA enhanced slow anion channel function during stomatal closure.","MITOCHONDRIAL PYRUVATE CARRIER 1 (MPC1)","(ATMPC1);MITOCHONDRIAL PYRUVATE CARRIER 1 (MPC1)"]
["AT3G15353","tan","metallothionein, binds to and detoxifies excess copper and other metals, limiting oxidative damage","METALLOTHIONEIN 3 (MT3)","(ATMT3);METALLOTHIONEIN 3 (MT3)"]
["AT3G46430","tan","Mitochondrial F1F0-ATP synthase.","(ATMTATP6)","(ATMTATP6)"]
["AT4G00480","tan","MYC-related protein with a basic helix-loop-helix motif at the C-terminus and a region similar to the maize B/R family at the N-terminus. Important regulator of trichome and root hair initiation.","(ATMYC1)","(ATMYC1); (myc1)"]
["AT1G32640","tan","Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif and interacts with Jasmonate ZIM-domain proteins. MYC2 interacts with EIN3 and EIL1 to repress hook curvature and resistance to Botrytis cinera.Its transcription is induced by dehydration stress, ABA treatment and blue light via CRY1. Negative regulator of blue light-mediated photomorphogenic growth and blue and far-red-light-regulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. For example it binds to and regulates the expression of NST1. Its stability is modulated by PUB10 through polyubiquitination.","(MYC2)","(ATMYC2); (RD22BP1);JASMONATE INSENSITIVE 1 (JAI1);JASMONATE INSENSITIVE 1 (JIN1); (MYC2); (ZBF1)"]
["AT3G58160","tan","Class XI myosin gene expressed in flowers from 4-6 week old plants and leaves from 3 week old plants","(XIJ)","(ATMYOS3);MYOSIN A3 (MYA3);MYOSIN XI-16 (XI-16); (XIJ);MYOSIN XI J (ATXIJ)"]
["AT4G33460","tan","Member of NAP subfamily. Putative component of chloroplast ECF/ABC-Transporter involved in metal homeostasis.","ATP-BINDING CASSETTE I10 (ABCI10)","(ATNAP13);EMBRYO DEFECTIVE 2751 (EMB2751);ATP-BINDING CASSETTE I10 (ABCI10)"]
["AT5G16000","tan","NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP).","NSP-INTERACTING KINASE 1 (NIK1)","(ATNIK1);NSP-INTERACTING KINASE 1 (NIK1)"]
["AT4G35460","tan","NADPH-dependent thioredoxin reductase 1 (NTR1. Similar to E.coli NTR and has conserved NADPH binding domains.","NADPH-DEPENDENT THIOREDOXIN REDUCTASE B (NTRB)","(ATNTRB);NADPH-DEPENDENT THIOREDOXIN REDUCTASE B (NTRB);NADPH-DEPENDENT THIOREDOXIN REDUCTASE 1 (NTR1)"]
["AT4G00860","tan","putative pathogenesis-related protein whose transcript level is induced in response to ozone and pathogenic Pseudomonas strains.","(ATOZI1)","(ATOZI1);ARABIDOPSIS THALIANA OZONE-INDUCED PROTEIN 1 (AT0ZI1)"]
["AT4G04640","tan","One of two genes (with ATPC2) encoding the gamma subunit of Arabidopsis chloroplast ATP synthase.","(ATPC1)","(ATPC1)"]
["AT5G61130","tan","Encodes a plasmodesmatal localized protein with callose binding activity. The function of PDCB1 is unknown but overexpression leads to the hyperaccumulation of callose.","PLASMODESMATA CALLOSE-BINDING PROTEIN 1 (PDCB1)","(ATPDCB1);PLASMODESMATA CALLOSE-BINDING PROTEIN 1 (PDCB1)"]
["AT1G49340","tan","Encodes a phosphatidylinositol 4-kinase that is expressed in inflorescences and shoots.","(ATPI4K ALPHA)","(ATPI4K ALPHA)"]
["AT5G58700","tan","phosphatidylinositol-speciwc phospholipase C4;(source:Araport11)","PHOSPHATIDYLINOSITOL-SPECIFIC PHOSPHOLIPASE C4 (PLC4)","(ATPLC4);PHOSPHATIDYLINOSITOL-SPECIFIC PHOSPHOLIPASE C4 (PLC4)"]
["AT3G55140","tan","Pectate lyase","(ATPLL2)","(ATPLL2)"]
["AT5G48900","tan","Pectate lyase","(ATPLL21)","(ATPLL21)"]
["AT3G24670","tan","Pectate lyase","(ATPLL22)","(ATPLL22)"]
["AT1G71860","tan","Encodes a protein with tyrosine phosphatase activity that is downregulated in response to cold and upregulated in response to salt stress.","PROTEIN TYROSINE PHOSPHATASE 1 (PTP1)","(ATPTP1);PROTEIN TYROSINE PHOSPHATASE 1 (PTP1)"]
["AT2G22390","tan","Encodes an unusual RabA family member as it has a Lysine the position of the highly conserved Glu of the WDTAGQE motif and has the sequence CVAA! at its C-ter rather than the conventional CCXX(X) or CXC motifs that promote geranylgeranylation and membrane anchoring.","RAB GTPASE HOMOLOG A4E (RABA4E)","(ATRABA4E);RAB GTPASE HOMOLOG A4E (RABA4E)"]
["AT3G53610","tan","GTPase AtRAB8 (atrab8). AtRAB8s associate with the endomembrane system and modulate tubulovesicular trafficking between compartments of the biosynthetic and endocytic pathways. Together with RAB8A and 8D interacts with several RTNLB proteins and participates in A. tumefaciens and P. syringae infection processes.","RAB GTPASE HOMOLOG 8 (RAB8)","(AtRABE1a); (AtRab8B); (RAB8B);RAB GTPASE HOMOLOG 8 (RAB8);RAB GTPASE HOMOLOG 8 (ATRAB8)"]
["AT5G59750","tan","monofunctional riboflavin biosynthesis protein RIBA 3;(source:Araport11)","HOMOLOG OF RIBA 3 (RIBA3)","(ATRIBA3);HOMOLOG OF RIBA 3 (RIBA3)"]
["AT4G38430","tan","Member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily, also known as DUF315). Interacts with ROP1 but the whole protein lacks Rho guanyl-nucleotide exchange factor activity in vitro. The DUF315/PRONE domain is sufficient to confer RopGEF catalytic activity. ropgef1 mutants have defects in auxin transport that result in abnormal development of embryos and growth defects.","ROP (RHO OF PLANTS) GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 (ROPGEF1)","(ATROPGEF1);ROP (RHO OF PLANTS) GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 (ROPGEF1)"]
["AT1G31650","tan","Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.","ROP (RHO OF PLANTS) GUANINE NUCLEOTIDE EXCHANGE FACTOR 14 (ROPGEF14)","(ATROPGEF14);ROP (RHO OF PLANTS) GUANINE NUCLEOTIDE EXCHANGE FACTOR 14 (ROPGEF14)"]
["AT1G32200","tan","Encodes a chloroplast glycerol-3-phosphate acyltransferase.Involved in the biosynthesis of chloroplast phosphatidylglycerol.","(ATS1)","(ATS1);ACYLTRANSFERASE 1 (ACT1)"]
["AT5G41920","tan","Encodes a GRAS family transcription factor that is involved in bundle sheath cell fate specification.","SCARECROW-LIKE 23 (SCL23)","(ATSCL23);SCARECROW-LIKE 23 (SCL23)"]
["AT3G20920","tan","Encodes an endoplasmic reticulum localized protein with similarity to yeast Sec62p. Mutants display growth defects and significantly reduced fertility. AtSec62 does not complement the thermosensitive phenotype of yeast Sec62 mutants.","(ATSEC62)","(ATSEC62)"]
["AT5G54100","tan","SPFH/Band 7/PHB domain-containing membrane-associated protein family;(source:Araport11)","STOMATIN-LIKE PROTEIN 2 (SLP2)","(ATSLP2);STOMATIN-LIKE PROTEIN 2 (SLP2)"]
["AT3G18280","tan","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)","TRACHEARY ELEMENT DIFFERENTIATION-RELATED 4 (TED4)","(ATTED4);TRACHEARY ELEMENT DIFFERENTIATION-RELATED 4 (TED4)"]
["AT1G54780","tan","Encodes a thylakoid lumen protein regulating photosystem II repair cycle. Has acid phosphatase activity. The mRNA is cell-to-cell mobile.","THYLAKOID LUMEN PROTEIN 18.3 (TLP18.3)","(ATTLP18.3);THYLAKOID LUMEN PROTEIN 18.3 (TLP18.3)"]
["AT1G10950","tan","Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis. Functions in the deposition of rhamnogalacturonan II and I for cell growth.","TRANSMEMBRANE NINE 1 (TMN1)","(AtTMN1);TRANSMEMBRANE NINE 1 (TMN1);ENDOMEMBRANE PROTEIN 12 (EMP12)"]
["AT1G55130","tan","Encodes an Arabidopsis Transmembrane nine (TMN) protein. Transmembrane nine (TM9) proteins are localized in the secretory pathway of eukaryotic cells and are involved in cell adhesion and phagocytosis.","TRANSMEMBRANE NINE 6 (TMN6)","(AtTMN6);TRANSMEMBRANE NINE 6 (TMN6)"]
["AT5G63920","tan","Encodes topoisomerase 3alpha. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates.","TOPOISOMERASE 3ALPHA (TOP3A)","(AtTOP3alpha);TOPOISOMERASE 3ALPHA (TOP3A)"]
["AT5G59290","tan","Encodes a cytosolic isoform of UDP-glucuronic acid decarboxylase. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.","UDP-GLUCURONIC ACID DECARBOXYLASE 3 (UXS3)","(ATUXS3);UDP-GLUCURONIC ACID DECARBOXYLASE 3 (UXS3)"]
["AT2G23460","tan","encodes a novel G-alpha protein that shares similarity to plant, yeast, and animal G-alpha proteins at the C-terminus. It contains an N-terminus that is as large as the C-terminus, is a member of a small family, and is expressed in all tissues examined, including roots, leaves, stems, flowers, and fruits.","EXTRA-LARGE G-PROTEIN 1 (XLG1)","(ATXLG1);EXTRA-LARGE G-PROTEIN 1 (XLG1)"]
["AT3G62720","tan","Encodes a protein with xylosyltransferase activity, which is specific for UDP-xylose as donor substrate and for oligosaccharides with a degree of polymerization >4. Although the enzyme utilizes either cellopentaose or cellohexaose, its activity is four-fold higher with cellohexaose as an acceptor compared to cellopentaose. The enzyme is able to add several xylosyl residues to the acceptor forming mono-, di- and trixylosylated polysaccharides.","XYLOSYLTRANSFERASE 1 (XT1)","(ATXT1);XYLOSYLTRANSFERASE 1 (XT1);XYG XYLOSYLTRANSFERASE 1 (XXT1); (ATXXT1)"]
["AT4G34720","tan","vacuolar H+-pumping ATPase 16 kDa proteolipid (ava-p1)","(AVA-P1)","(AVA-P1);VACUOLAR H+-PUMPING ATPASE C1 (VHA-C1); (ATVHA-C1)"]
["AT1G79990","tan","Part of Coat Protein Complexes (COPs).","(B?3-COP)","(B?3-COP)"]
["AT1G76920","tan","F-box family E3 ubiquitin ligase. Involved in BES1 degradation via selective autophagy in a DSK2 dependent manner.","(BAF1)","(BAF1)"]
["AT2G46510","tan","Encodes a nuclear localized BLH domain containing transcriptional activator involved in response to ABA. Overexpression confers enhanced ABA responsiveness while loss of function mutants are ABA sensitive.bHLH17 interacts with JAZ proteins, and functions redundantly with bHLH3, bHLH13 and bHLH14 to negatively regulate jasmonate responses.","ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR (AIB)","(BHLH017);ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR (ATAIB);ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR (AIB);JA-ASSOCIATED MYC2-LIKE 1 (JAM1); (BHLH17)"]
["AT5G03455","tan","Encodes a homolog of yeast cell cycle regulator CDC25. It has a sole catalytic domain and devoid of the N-terminal regulatory region found in the human CDC25 and is capable of reducing the mitotic cell length of transformed fission yeast. Non-plant CDC25 proteins have been shown to do this. However, the gene is more or less constant, regardless of whether the tissue examined contained proliferative cells. Also described as having arsenate reductase activity involved in arsenate resistance.","(CDC25)","(CDC25); (ATACR2);ARSENATE REDUCTASE 2 (ACR2); (ARATH;CDC25)"]
["AT2G33510","tan","CFL1 is a negative regulator of cuticle development. Overexpression of CFL1 causes defects in cuticle formation. Interacts with FBH1, FBH3 and HDG1 to regulate cuticle formation. The physical interaction requires the C terminal 50 amino acids.","(CFL1)","(CFL1)"]
["AT3G49720","tan","Encodes CGR2 (cotton Golgi-related 2). CGR2 and a close homologue CGR3 have overlapping roles in plant growth and pectin methylesterification in the Golgi apparatus.","(CGR2)","(CGR2)"]
["AT4G18480","tan","Encodes the CHLI subunit of magnesium chelatase which is required for chlorophyll biosynthesis. All four cysteine residues of the protein form two disulfide bonds (Cys102-Cys193 and Cys354-Cys396) under oxidized conditions but are fully reduced by reduction. It was suggested that the redox state of CHLI is regulated in vivo by the change of the redox environment in the chloroplasts probably via the Trx system.","(CHLI1)","(CHLI1);CHLORINA 42 (CH42);CHLORINA 42 (CH-42); (CHL11); (CHLI-1);LOW TEMPERATURE WITH OPEN-STOMATA 1 (LOST1)"]
["AT1G56190","tan","One of a pair of plastid localized phosphoglycerate kinases involved in galactolipid biosynthesis. Functions redundantly with AT3g12780 (PGK1) in the chloroplast in the biosynthesis of thylakoid membrane galactolipids. Double mutants are photosynthetically incompetent, plants are albino and seedling lethal.","(CPGK2)","(CPGK2); (PGKP2); (PGK2)"]
["AT2G24630","tan","encodes a XyG glucan synthase; gene similar to cellulose synthase","(ATCSLC08)","(CSLC8);CELLULOSE-SYNTHASE LIKE C8 (ATCSLC8); (CSLC08); (ATCSLC08)"]
["AT5G60940","tan","Member of CstF complex.","(CSTF50)","(CSTF50)"]
["AT1G17970","tan","RING/U-box superfamily protein;(source:Araport11)","(CTL15)","(CTL15)"]
["AT1G59650","tan","Encodes CW14.","(CW14)","(CW14)"]
["AT2G34170","tan","hypothetical protein (DUF688);(source:Araport11)","(DEG21)","(DEG21)"]
["AT3G02720","tan","Encodes a glyoxalase with high activity towards glyoxal and methylglyoxal. It differs from its animal and bacterial homologs with respect to the configuration of its catalytic residues and the oligomeric property of the enzyme. The mRNA is cell-to-cell mobile.","(DJ1D)","(DJ1D); (DJ-1D)"]
["AT1G56300","tan","Chaperone DnaJ-domain superfamily protein;(source:Araport11)","(DJC53)","(DJC53)"]
["AT3G29240","tan","Interacts with chloroplast chaperone CLPC1, which unfolds and delivers substrates to the stromal CLPPRT protease complex for degradation. CLPD and DUF760-6 form a small module (IV) connecting to DUF179-3, CLPX1, and CLPB3.","(DUF179-3)","(DUF179-3)"]
["AT4G26910","tan","Encodes the E2 subunit of the 2-oxoglutarate dehydrogenase.","(E2- OGDH1)","(E2- OGDH1)"]
["AT5G04560","tan","Encodes a DNA glycosylase DEMETER (DME). Responsible for endosperm maternal-allele-specific hypomethylation at the MEDEA (MEA) gene. DME can excise 5-methylcytosine in vitro and when expressed in E. coli. DME establishes MEA imprinting by removing 5-methylcytosine to activate the maternal allele.","DEMETER (DME)","(EMB1649);DEMETER (DME)"]
["AT1G18060","tan","localized to chloroplasts","(FBN-LIKE)","(FBN-LIKE)"]
["AT1G60950","tan","encodes a major leaf ferredoxin","(FED A)","(FD2); (FED A);FERREDOXIN 2 (ATFD2)"]
["AT5G42270","tan","VAR1 contains a conserved motif for ATPase and a metalloprotease characteristic to FtsH proteins, and is targeted into chloroplasts. A VAR1-fusion protein synthesized in vitro exhibited ATPase activity and partial metalloprotease activity. This protein is located to the thylakoid membrane and forms a complex with VAR2. FtsH1 (VAR1) and FtsH5 are interchangeable in thylakoid membranes. Phosphorylation of this protein is dependent on calcium. The mRNA is cell-to-cell mobile.","VARIEGATED 1 (VAR1)","(FTSH5);VARIEGATED 1 (VAR1)"]
["AT3G52750","tan","Nuclear gene that encodes a plastidial division protein (FtsZ2-2). FtsZ2-2 is involved in chloroplast morphology and internal organisation in addition to participating in chloroplast partition","(FTSZ2-2)","(FTSZ2-2)"]
["AT4G34260","tan","1,2-alpha-L-fucosidase;(source:Araport11)","(FUC95A)","(FUC95A);ALTERED XYLOGLUCAN 8 (AXY8)"]
["AT3G06440","tan","Encodes a Golgi-localized hydroxyproline-O-galactosyltransferase. Mutants display multiple phenotypes including reduced root hair growth and reduced seed coat mucilage.","(GALT3)","(GALT3)"]
["AT1G53290","tan","Together with other Hyp-GALTs (GALT2, GALT5, GALT7, GALT8) catalyzes the addition of the first galactose to Hyp residues within AGP cores.","(GALT9)","(GALT9)"]
["AT3G13040","tan","myb-like HTH transcriptional regulator family protein;(source:Araport11)","(GAMMAMYB2)","(GAMMAMYB2)"]
["AT3G04120","tan","encodes cytosolic GADPH (C subunit) involved in the glycolytic pathway but also interacts with H2O2 potentially placing it in a signalling cascade induced by ROS. The mRNA is cell-to-cell mobile.","GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1 (GAPC1)","(GAPC-1);GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT (GAPC);GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C SUBUNIT 1 (GAPC1)"]
["AT5G60600","tan","Encodes a chloroplast-localized hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) synthase (HDS), catalyzes the formation of HMBPP from 2-C-methyl-D-erythrytol 2,4-cyclodiphosphate (MEcPP). The HDS enzyme controls the penultimate steps of the biosynthesis of IPP and dimethylallyl diphosphate (DMAPP) via the MEP pathway and may serve as a metabolic control point for SA-mediated disease resistance. In the light, the electrons required for the reaction catalyzed by HDS are directly provided by the electron flow from photosynthesis via ferredoxin. In the dark however, the enzyme requires an electron shuttle: ferredoxin-NADP<sup>+</sup> reductase. The mRNA is cell-to-cell mobile.","4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE (HDS)","(GCPE); (ISPG);CONSTITUTIVE SUBTILISIN 3 (CSB3);CHLOROPLAST BIOGENESIS 4 (CLB4);4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE SYNTHASE (HDS)"]
["AT1G17890","tan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)","(GER2)","(GER2)"]
["AT3G25530","tan","Encodes gamma-hydroxybutyrate dehydrogenase (AtGHBDH). Contains a NADP-binding domain. GHBDH is proposed to function in oxidative stress tolerance.","GLYOXYLATE REDUCTASE 1 (GLYR1)","(GHBDH); (ATGHBDH);GLYOXYLATE REDUCTASE 1 (GLYR1);GLYOXYLATE REDUCTASE 1 (GR1); (ATGLYR1)"]
["AT3G11600","tan","One of two plant specific paralogs of unknown function. Interacts with GL2. GIR1/GIR2 loss of function resembles gl2 lof mutations.","(GIR2)","(GIR2)"]
["AT3G03640","tan","Encodes beta-glucosidase (GLUC).","BETA GLUCOSIDASE 25 (BGLU25)","(GLUC);BETA GLUCOSIDASE 25 (BGLU25)"]
["AT1G06490","tan","Encodes Callose Synthase 7 (CalS7), a phloem-specific callose synthase responsible for callose deposition in developing sieve elements during phloem formation and in mature phloem induced by wounding.","CALLOSE SYNTHASE 7 (CalS7)","(gsl07);ARABIDOPSIS THALIANA GLUCAN SYNTHASE-LIKE 7 (ATGSL07);CALLOSE SYNTHASE 7 (CalS7);GLUCAN SYNTHASE-LIKE 7 (GSL7);GLUCAN SYNTHASE-LIKE 7 (GSL07); (atgsl7)"]
["AT5G27670","tan","Encodes HTA7, a histone H2A protein.","HISTONE H2A 7 (HTA7)","(H2A.W.7);HISTONE H2A 7 (HTA7)"]
["AT1G54690","tan","Encodes HTA3, a histone H2A protein. H2AX is a meiosis-specific isoform of histone H2A. Upon DSB formation, rapid accumulation of phosphorylated H2AX (&#947;-H2AX) occurs around the break site. \u0001H2AX foci accumulate in early G2. Immunolocalization studies in spread preparations of wild-type meiocytes at G2/early leptotene revealed the accumulation of numerous rather diffuse &#947;-H2AX foci throughout the chromatin. However, their accumulation is not contemporaneous with that of AtSPO11-1. At 3 h post-S, no &#947;-H2AX foci are detected. During the 3- to 5-h window when AtSPO11-1 foci rapidly disappear, there is an equally swift accumulation of &#947;-H2AX to a maximum of >50 diffuse foci. The level of &#947;H2AX then remains constant for a further 13 h before undergoing a gradual decrease to 10?20 foci in the 18- to 24-h post-S period. By 30 h the foci have disappeared from the chromatin.","GAMMA HISTONE VARIANT H2AX (GAMMA-H2AX)","(H2AXb);HISTONE H2A 3 (HTA3);GAMMA H2AX (G-H2AX);GAMMA HISTONE VARIANT H2AX (GAMMA-H2AX)"]
["AT5G47370","tan","homeobox-leucine zipper genes induced by auxin, but not by other phytohormones. Plays opposite roles in the shoot and root tissues in regulating auxin-mediated morphogenesis.","(HAT2)","(HAT2)"]
["AT4G35550","tan","Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.","WUSCHEL RELATED HOMEOBOX 13 (WOX13)","(HB-4);WUSCHEL RELATED HOMEOBOX 13 (WOX13); (ATWOX13)"]
["AT1G58290","tan","Encodes a protein with glutamyl-tRNA reductase (GluTR) activity, catalyzing the NADPH-dependent reduction of Glu-tRNA(Glu) to glutamate 1-semialdehyde (GSA) with the release of free tRNA(Glu). It is involved in the early steps of chlorophyll biosynthesis.","(HEMA1)","(HEMA1);ARABIDOPSIS THALIANA HEMA 1 (AtHEMA1);GLUTAMYL-TRNA REDUCTASE (GLUTR)"]
["AT5G02490","tan","Member of the cytosolic heat shock 70 protein family.","(Hsp70-2)","(Hsp70-2); (AtHsp70-2)"]
["AT4G18400","tan","hypothetical protein;(source:Araport11)","(INB1)","(INB1)"]
["AT4G02610","tan","A homologous cytosolic enzyme of the plastidal tryptophan synthase A (TSA); has been reported as the first enzyme in the tryptophan-independent pathway of auxin synthesis.","(INS)","(INS)"]
["AT1G70480","tan","Protein residing in the chloroplast outer membrane, has channel-like properties facilitating the export of the jasmonate precursor 12-oxophytodienoic acid (OPDA) from the chloroplast.","(JASSY)","(JASSY)"]
["AT5G15960","tan","cold and ABA inducible protein kin1, possibly functions as an anti-freeze protein. Transcript level of this gene is induced by cold, ABA, dehydration and osmoticum (mannitol). However, protein activity of GUS fused to the promoter of this gene is inhibited by cold treatment, suggesting an inhibition of the protein by increased transcript level.","(KIN1)","(KIN1)"]
["AT3G24750","tan","Encodes a member of the LAZY gene family that is expressed in the hypocotyl and the root","(LAZY5)","(LAZY5)"]
["AT1G75180","tan","Erythronate-4-phosphate dehydrogenase family protein;(source:Araport11)","(LDDH1)","(LDDH1)"]
["AT4G02130","tan","Encodes a protein with putative galacturonosyltransferase activity.","GALACTURONOSYLTRANSFERASE-LIKE 6 (GATL6)","(LGT10);GALACTURONOSYLTRANSFERASE-LIKE 6 (GATL6)"]
["AT5G54270","tan","Lhcb3 protein is a component of the main light harvesting chlorophyll a/b-protein complex of Photosystem II (LHC II).","LIGHT-HARVESTING CHLOROPHYLL B-BINDING PROTEIN 3 (LHCB3)","(LHCB3*1);LIGHT-HARVESTING CHLOROPHYLL B-BINDING PROTEIN 3 (LHCB3)"]
["AT2G45250","tan","Member of the DREAM complex, which represses growth in response to DNA damage, LIN52 type.","(LIN52A)","(LIN52A)"]
["AT2G38530","tan","Involved in lipid transfer between membranes and plays a role in maintaining the integrity of the cuticle-cell wall interface. Belongs to a family of Lipid transfer proteins. Sequence similarity to other plant/Arabidopsis LPT genes but highest similarity to LPT1. Stress and pathogen-inducible motifs found in the upstream region. Expressed in flower, leaves and siliques but absent in roots. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.","LIPID TRANSFER PROTEIN 2 (LTP2)","(LP2);CELL GROWTH DEFECT FACTOR-3 (cdf3);LIPID TRANSFER PROTEIN 2 (LTP2); (ATLTPI-5)"]
["AT1G18680","tan","Encodes a mitochondrial endonuclease expressed in pollen.","(M20)","(M20)"]
["AT5G01970","tan","unknown protein;(source:TAIR10)","(MADA2)","(MADA2)"]
["AT5G19290","tan","alpha/beta-Hydrolases superfamily protein;(source:Araport11)","(MAGL16)","(MAGL16)"]
["AT1G77420","tan","alpha/beta-Hydrolases superfamily protein;(source:Araport11)","(MAGL5)","(MAGL5)"]
["AT5G03630","tan","Monodehydroascorbate reductase involved in ascorbate recycling.","(MDAR2)","(MDAR2)"]
["AT3G21350","tan","RNA polymerase transcriptional regulation mediator-like protein;(source:Araport11)","(MED6)","(MED6)"]
["AT1G23360","tan","Encodes a 2-phytyl-1,4-naphthoquinone methyltransferase that catalyzes the final step in phylloquinone (vitamin K1) biosynthesis.","(MENG)","(MENG)"]
["AT1G55480","tan","Encodes a member of a novel plant protein family containing a PDZ, a K-box, and a TPR motif. mRNA but not protein levels decrease after wounding. ZKT is phosphorylated at Thr and Ser residues after wounding. The mRNA is cell-to-cell mobile.","PROTEIN CONTAINING PDZ DOMAIN, A K-BOX DOMAIN, AND A TPR REGION (ZKT)","(MET1);PROTEIN CONTAINING PDZ DOMAIN, A K-BOX DOMAIN, AND A TPR REGION (ZKT)"]
["AT4G13020","tan","Encodes a member of the cdc2+ family of protein kinases MHK. Similar to the mak genes of rats. mak encodes a protein kinase that may play a role in spermatogenesis.","(MHK)","(MHK)"]
["AT4G32060","tan","Encodes an EF-hand protein with homology to constituents of the mitochondrial Ca2+ uniporter machinery in mammals. MICU binds Ca2+ and localizes to the mitochondria in Arabidopsis. It is a negative regulator of mitochondrial calcium uptake. Mutants display elevated matrix calcium at steady state and modified calcium transient kinetics in vivo.","(MICU)","(MICU)"]
["AT4G30000","tan","Encodes a bifunctional mitochondrial hydroxymethyldihydropterin pyrophosphokinase/ dihydropteroate synthase (HPPK/DHPS). Exists as a dimer.","(MITHPPK/DHPS)","(MITHPPK/DHPS)"]
["AT1G21150","tan","mTERF protein involved in mitochondrial development; required for salt tolerance.","(MTERF27)","(MTERF27)"]
["AT2G39450","tan","Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn<sup>2+</sup> and Cu<sup>2+</sup> tolerance.","(MTP11)","(MTP11); (ATMTP11)"]
["AT1G70000","tan","Encodes a MYB-like Domain transcription factor that plays a positive role in anthocyanin accumulation in response to light and cytokinin via repression of MYBL2.MYBD expression increased in response to light or cytokinin, and MYBD enhanced anthocyanin biosynthesis via the repression of MYBL2 encoding for a transcription factor that had a negative effect on this process. In addition, MYBD can bind in vivo to the MYBL2 promoter and a lower level of histone H3K9 acetylation (H3K9ac) at upstream region of MYBL2 in MYBD-OX in comparison to wild-type plants, implies that MYBD represses MYBL2 expression via an epigenetic mechanism.","(MYBD)","(MYBD)"]
["AT4G17880","tan","MYC4 is bHLH transcriptional regulator. It functions as a JAZ-interacting transcription factor that acts together with MYC2 and MYC3 to activate JA-responses. It also functions in blue light mediated secondary cell wall biogenesis via regulation of NST1 expression. MYC4 directly binds to NST1 promoter and activates its expression.","(MYC4)","(MYC4)"]
["AT5G57830","tan","zein-binding protein (Protein of unknown function, DUF593);(source:Araport11)","(MYOB12)","(MYOB12)"]
["AT3G12260","tan","LYR family of Fe/S cluster biogenesis protein;(source:Araport11)","(NDUFA6)","(NDUFA6); (B14)"]
["AT1G79010","tan","Part of mitochondrial complex I (CI), which plays a crucial role in oxidising NADH generated by the metabolism (including photorespiration) and thereby participates in the mitochondrial electron transfer chain feeding oxidative phosphorylation that generates ATP.","(NDUFS8.2)","(NDUFS8.2)"]
["AT5G08530","tan","51 kDa subunit of complex I;(source:Araport11)","51 KDA SUBUNIT OF COMPLEX I (CI51)","(NDUFV1);51 KDA SUBUNIT OF COMPLEX I (CI51)"]
["AT1G73600","tan","Encodes a S-adenosyl-L-methionine-dependent phosphoethanolamine N-methyltransferase whose expression is responsive to both phosphate (Pi) and phosphite (Phi) in roots. It catalyzes the three sequential P-base methylation of phosphoethanolamine to phosphocholine. Homologous biochemical function to NMT1 (At3g18000). Double mutants of NMT1 and NMT3 are defective in leaf, root, flower, seed, and pollen development.","(NMT3)","(NMT); (NMT3);PHOSPHOETHANOLAMINE METHYLTRANSFERASE3 (ATPMT3); (DEG26)"]
["AT5G09960","tan","Member of the RIN4-like/NOI family; upregulated after spider mite feeding.","(NOI7)","(NOI7)"]
["AT5G48500","tan","Member of the RIN4-like/NOI family; upregulated after spider mite feeding.","(NOI9)","(NOI9)"]
["AT1G22540","tan","Major facilitator superfamily protein;(source:Araport11)","(NPF5.10)","(NPF5.10)"]
["AT1G72130","tan","Tonoplast localized pH dependent, low affinity nitrogen transporter.In shoots, expressed in leaf veins and mesophyll. In roots, GUS activity was detected in root vascular stele. More highly expressed in roots.","(NPF5.11)","(NPF5.11)"]
["AT1G49670","tan","molecular function has not been defined. Was shown involved in oxidative stress tolerance.","(NQR)","(NQR)"]
["AT4G15950","tan","Non-catalytic subunit common to Nuclear DNA-dependent RNA polymerases IV and V; homologous to budding yeast RPB4. Role in gene silencing. Required for RNA-directed DNA methylation.","(NRPD4)","(NRPD4); (NRPE4);RNA-DIRECTED DNA METHYLATION 2 (RDM2)"]
["AT1G76405","tan","outer envelope pore 21B-like protein;(source:Araport11)","(OEP2)","(OEP2)"]
["AT3G44160","tan","Encodes a chloroplast-localized Omp85 family member. Members of this family chaperone the membrane insertion of beta-barrel-shaped outer membrane proteins in bacteria, mitochondria and probably chloroplasts and facilitate the transfer of nuclear-encoded cytosolically synthesized preproteins across the outer envelope of chloroplasts.","(P39)","(P39)"]
["AT2G46110","tan","Encodes a ketopentoate hydroxymethyltransferase that appears to localize to the mitochondria. This protein is expected to play a role in pantothenate (vitamin B5) biosynthesis.","KETOPANTOATE HYDROXYMETHYLTRANSFERASE 1 (KPHMT1)","(PANB1);KETOPANTOATE HYDROXYMETHYLTRANSFERASE 1 (KPHMT1)"]
["AT1G30690","tan","Sec14p-like phosphatidylinositol transfer family protein;(source:Araport11)","(PATL4)","(PATL4)"]
["AT3G51670","tan","PATLs belong to a family of proteins having a Golgi dynamics (GOLD) domain in tandem with the Sec14p-like domain. PATLs are auxin regulated. Quadruple mutants (patl2456) show altered PIN1 lateralization in root endodermis cells.","(PATL6)","(PATL6)"]
["AT2G26500","tan","Essential for the stabilization and function of the cytochrome b6f complex.","(PETM)","(PETM)"]
["AT1G63010","tan","Encodes an SPX domain protein that transports Pi into the vacuole and is essential for phosphate homeostasis.","VACUOLAR PHOSPHATE TRANSPORTER 1 (VPT1)","(PHT5;1);VACUOLAR PHOSPHATE TRANSPORTER 1 (VPT1)"]
["AT1G64460","tan","Phosphatidylinositol 4-kinase involved in root elongation and hypersensitive response.Affects stability of MIEL1 which in turn affects MYB30 turnover.","(PI4Kgamma2)","(PI4Kgamma2)"]
["AT1G61850","tan","Encodes a non-specific lipase that hydrolyzes phospholipids as well as galactolipids, at both sn-1 and sn-2 positions. Involved in basal jasmonic acid biosynthesis by releasing the precursor fatty acid from membrane lipids. Mutant plants were impacted in resistance to fungus B. cinerea.","(PLAI)","(PLAI)"]
["AT1G04680","tan","Pectate lyase","(PLL26)","(PLL26)"]
["AT5G11560","tan","catalytics;(source:Araport11)","(PNET5)","(PNET5)"]
["AT4G31250","tan","Leucine-rich repeat protein kinase family protein;(source:Araport11)","(PRK7)","(PRK7)"]
["AT2G22420","tan","Encodes a cell wall-localized class III peroxidase that is directly regulated by the MADS-box transcription factor AGL15 and is involved in lignified tissue formation.","(PRX17)","(PRX17)"]
["AT4G21960","tan","Encodes AT4g21960 (AT4g21960/T8O5_170). The mRNA is cell-to-cell mobile.","(PRXR1)","(PRXR1)"]
["AT5G64040","tan","Encodes the only subunit of photosystem I located entirely in the thylakoid lumen. May be involved in the interaction between plastocyanin and the photosystem I complex. Phosphorylation of this protein is dependent on calcium.","(PSAN)","(PSAN)"]
["AT1G03600","tan","PSB27 is a chloroplast lumen localized protein that is involved in adaptation to changes in light intensity.","(PSB27)","(PSB27)"]
["AT2G40640","tan","Plant U-box type E3 ubiquitin ligase (PUB).","(PUB62)","(PUB62)"]
["AT5G26667","tan","encodes a uridine 5'-monophosphate (UMP)/cytidine 5'-monophosphate (CMP) kinase. The mRNA is cell-to-cell mobile.","(PYR6)","(PYR6)"]
["AT3G05480","tan","Involved in the regulation of DNA damage repair and homologous recombination.","(RAD9)","(RAD9)"]
["AT5G49470","tan","Encodes a protein with similarity to RAF MAP Kinase that is expressed in most plant tissues. Based on loss of function and gain of function phenotypes, RAF10 appears to be involved in ABA response.","(RAF10)","(RAF10)"]
["AT2G31010","tan","Member of the B1 subgroup of RAF kinases; phosphorylates SnRK2.6KR and Ser171 in the activation loop.","(RAF13)","(RAF13); (M3K&#952;1)"]
["AT3G06620","tan","Raf-like kinase required for stomatal vapor pressure difference response.","(RAF7)","(RAF7)"]
["ATCG00490","tan","large subunit of RUBISCO. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","(RBCL)","(RBCL)"]
["AT5G12150","tan","Encodes a protein with similarity to REN1, a Rho GTPase activating protein.It is cytoplasmic and plasma membrane associated in interphase, but during mitosis localizes to the CDZ/CDS in a POK-dependent manner.","(PHGAP1)","(REN2); (PHGAP1)"]
["AT3G24240","tan","RGFR1 is a leucine--rich repeat receptor kinase that, together with RGFR2 and RGFR3, binds ROOT GROWTH FACTORS and is required for establishing the gradient of PLETHORA1 and PLETHORA2 essential for proper root growth and development.","(RGFR1)","(RGFR1);RGF1 INSENSITIVE 1 (RGI1)"]
["AT5G08050","tan","Encodes a grana core localized protein. Mutant plants have reduced NPQ, affected organization of light-havesting complex II and an enhanced grana stacking.","(RIQ1)","(RIQ1)"]
["AT1G74730","tan","Encodes a grana core localized protein, is homologous to RIG1. Mutant plants have reduced NPQ, affected organization of light-havesting complex II and an enhanced grana stacking.","(RIQ2)","(RIQ2)"]
["AT5G51140","tan","Enzyme for the pseudouridine (&#936;) to uridine (U) conversion.","(RLUA6)","(RLUA6)"]
["AT1G74450","tan","Plants overexpressing At1g74450 are stunted in height and have reduced male fertility.","(ROH1D)","(ROH1D)"]
["AT1G64860","tan","Subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme","SIGMA FACTOR A (SIGA)","(RPOD1);RNA POLYMERASE SIGMA SUBUNIT 1 (SIG1);RNAPOLYMERASE SIGMA SUBUNIT 2 (SIG2); (SIGB);SIGMA FACTOR A (SIGA)"]
["AT5G09460","tan","transcription factor bHLH143;(source:Araport11)","(SACL1)","(SACL1)"]
["AT1G09050","tan","arginine-glutamic acid dipeptide repeat protein;(source:Araport11)","(SANT1)","(SANT1)"]
["AT1G09040","tan","arginine-glutamic acid dipeptide repeat protein;(source:Araport11)","(SANT2)","(SANT2)"]
["AT1G29310","tan","SecY protein transport family protein;(source:Araport11)","(Sec. 61-alpha1)","(Sec. 61-alpha1)"]
["AT3G63460","tan","Together with SEC31A a component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER).","(SEC31B)","(SEC31B)"]
["AT4G14342","tan","Splicing factor 3B subunit 5/RDS3 complex subunit 10;(source:Araport11)","(SF3B5B)","(SF3B5B)"]
["AT5G58575","tan","Component of the deubiquitination module of the SAGA complex.","(SGF11)","(SGF11)"]
["AT1G16860","tan","Plasma membrane-localized proteins that negatively regulate cellulose synthesis by inhibiting the exocytosis of CESAs.","(SHOU4L)","(SHOU4L)"]
["AT4G12420","tan","Encodes a protein of unknown function involved in directed root tip growth. It is a member of 19-member gene family and is distantly related structurally to the multiple-copper oxidases ascorbate oxidase and laccase, though it lacks the copper-binding domains. The protein is glycosylated and GPI-anchored. It is localized to the plasma membrane and the cell wall. The gene is expressed most strongly in expanding tissues.","(SKU5)","(SKU5)"]
["AT3G47460","tan","member of SMC subfamily","(SMC2B)","(SMC2B)"]
["AT1G10690","tan","SIAMESE-RELATED (SMR) family gene; activated by SMOS1/SCL28 heterodimer thus inhibiting cell cycle progression at G2 and promoting the onset of endoreplication.","(SMR8)","(SMR8)"]
["AT3G22760","tan","CXC domain containing TSO1-like protein 1. The gene is expressed in stamens, pollen mother cells, and immature ovules. Regulates fate transition and cell Divisions in the stomatal lineage.","(SOL1)","(SOL1); (TCX3)"]
["AT5G08590","tan","Encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Similar to the calcium/calmodulin-dependent protein kinase subfamily and the SNF1 kinase subfamily.","SNF1-RELATED PROTEIN KINASE 2.1 (SNRK2.1)","(SRK2G);SNF1-RELATED PROTEIN KINASE 2.1 (SNRK2.1); (SNRK2-1);ARABIDOPSIS SKP1-LIKE1 (ASK2);ARABIDOPSIS SERINE/THREONINE KINASE 2 (ASK2)"]
["AT4G08810","tan","Calcium binding protein involved in cryptochrome and phytochrome coaction","(SUB1)","(SUB1)"]
["AT5G43990","tan","Encodes SUVR2, one of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. Localized to the nucleolus, maybe involved in regulation of rRNA expression.","(SUVR2)","(SUVR2);SET DOMAIN PROTEIN 18 (SDG18)"]
["AT3G19100","tan","Encodes a protein kinase that positively regulates gibberellic acid (GA) signaling by inactivating the E3 ubiquitin ligase GARU. GARU mediates ubiquitin-dependent degradation of GID1s, which are GA receptors.","(TAGK2)","(TAGK2)"]
["AT5G65000","tan","Encodes an ER-localized facilitator of UDP-N-acetylglucosamine (UDP-GlcNAc) and UDP-N-acetylgalactosamine (UDP-GalNAc) transport. It also regulates the cytokinin signal in meristematic cells through modulating activity of cytokinin oxidases/dehydrogenases. Finally, it is an important part of the ER quality control system, which determines the fate of aberrant proteins in the secretory pathway.","REPRESSOR OF CYTOKININ DEFICIENCY 1 (ROCK1)","(TEX2);REPRESSOR OF CYTOKININ DEFICIENCY 1 (ROCK1)"]
["AT1G12250","tan","Pentapeptide repeat protein involved in thylakoid biogenesis.","(TL20.3)","(TL20.3)"]
["AT4G12650","tan","Endomembrane protein 70 protein family;(source:Araport11)","(TMN12)","(TMN12)"]
["AT5G10840","tan","Endomembrane protein 70 protein family;(source:Araport11)","ENDOMEMBRANE PROTEIN 1 (EMP1)","(TMN8);ENDOMEMBRANE PROTEIN 1 (EMP1)"]
["AT5G25100","tan","Endomembrane protein 70 protein family;(source:Araport11)","(TMN9)","(TMN9)"]
["AT3G01780","tan","Encodes TPLATE, a cytokinesis protein targeted to the cell plate. Functions in vesicle-trafficking events required for site-specific cell wall modifications during pollen germination and for anchoring of the cell plate to the mother wall at the correct cortical position.","(TPLATE)","(TPLATE)"]
["AT4G39820","tan","Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.","(TRAPPC12)","(TRAPPC12)"]
["AT1G80500","tan","Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.","(TRAPPC2)","(TRAPPC2)"]
["AT5G58030","tan","Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.","(TRAPPC5)","(TRAPPC5)"]
["AT3G05000","tan","Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.","(TRAPPC6)","(TRAPPC6); (TRS33)"]
["AT4G10300","tan","RmlC-like cupins superfamily protein. Overexpression leads to trehalose resistance, drought and stress tolerance.","(TRR14)","(TRR14)"]
["AT2G20930","tan","Part of multi-protein complex, acting as guanine nucleotide exchange factors (GEFs) and possibly as tethers, regulating intracellular trafficking.","(TTRAPPC2(L))","(TTRAPPC2(L))"]
["AT3G50590","tan","WD40/YVTN repeat protein.","(TWD40-1)","(TWD40-1)"]
["AT4G27560","tan","Encodes a UDP-glycosyltransferase that contributes to cold, salt and drought stress tolerance via modulating anthocyanin accumulation.","(UGT79B2)","(UGT79B2)"]
["AT4G32530","tan","Member of V-ATPase family. Vacuolar-type H + -ATPase (V-ATPase) is a multisubunit proton pump located on the endomembranes.","(VHA-C')","(VHA-C')"]
["AT2G16510","tan","Member of V-ATPase family. Vacuolar-type H + -ATPase (V-ATPase) is a multisubunit proton pump located on the endomembranes.","(VHA-C5)","(VHA-C5)"]
["AT4G26710","tan","Member of V-ATPase family. Vacuolar-type H + -ATPase (V-ATPase) is a multisubunit proton pump located on the endomembranes.","(VHA-E2)","(VHA-E2)"]
["AT4G02620","tan","Member of V-ATPase family. Vacuolar-type H + -ATPase (V-ATPase) is a multisubunit proton pump located on the endomembranes.","(VHA-F)","(VHA-F)"]
["AT1G16780","tan","Encodes a type II H+-PPases that localizes to and function as a proton pump of the Golgi apparatus in most tissues except for mature leaves.","(VHP2;2)","(VHP2;2); (AtVHP2;2)"]
["AT4G19003","tan","E2F/DP family winged-helix DNA-binding domain-containing protein;(source:Araport11)","(VPS25)","(VPS25)"]
["AT3G02870","tan","Encodes a L-galactose-1-phosphate phosphatase, involved in ascorbate biosynthesis.","(VTC4)","(VTC4);L-GALACTOSE 1-PHOSPHATE PHOSPHATASE (GPP)"]
["AT4G27260","tan","encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin. It is involved in camalexin biosynthesis via conjugating indole-3-carboxylic acid (ICA) and cysteine (Cys). The mRNA is cell-to-cell mobile.","(WES1)","(WES1); (GH3.5)"]
["AT4G28710","tan","member of Myosin-like proteins The mRNA is cell-to-cell mobile.","(XIH)","(XIH);MYOSIN XI H (ATXIH)"]
["AT3G04910","tan","Serine/threonine protein kinase, whose transcription is regulated by circadian rhythm.","WITH NO LYSINE (K) KINASE 1 (WNK1)","(ZIK4); (ATWNK1);WITH NO LYSINE (K) KINASE 1 (WNK1)"]
["AT1G58350","tan","Putative serine esterase family protein;(source:Araport11)","(ZW18)","(ZW18)"]
["AT5G62790","tan","1-Deoxy-d-xylulose 5-phosphate reductoisomerase (DXR) catalyzes the first committed step of the 2-C-methyl-d-erythritol 4-phosphate pathway for isoprenoid biosynthesis. In Arabidopsis, DXR is encoded by a single-copy gene. Arabidopsis DXR is targeted to plastids and localizes into chloroplasts of leaf cells. DXR knockout or strongly silenced lines have a seedling lethal, albino phenotype. Transgenic, partially silenced lines expressing 35S:DXR have a variegated phenotype.","1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE (DXR)","1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE (DXR)"]
["AT4G15560","tan","Encodes a protein with 1-deoxyxylulose 5-phosphate synthase activity involved in the MEP pathway. It is essential for chloroplast development in Arabidopsis","CLOROPLASTOS ALTERADOS 1 (CLA1)","1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 2 (DXPS2); (AtCLA1);1-DEOXY-D-XYLULOSE 5-PHOSPHATE (DXP) SYNTHASE 1 (DXS1);CLOROPLASTOS ALTERADOS 1 (CLA1); (DEF); (CLA);1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE (DXS)"]
["AT1G09780","tan","Encodes a 2,3-biphosphoglycerate-independent phosphoglycerate mutase that is involved in pollen development and stomatal movement.","2,3-BIPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE 1 (iPGAM1)","2,3-BIPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE 1 (iPGAM1)"]
["AT3G08590","tan","Encodes a 2,3-biphosphoglycerate-independent phosphoglycerate mutase that is involved in pollen development and stomatal movement.","2,3-BIPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE 2 (iPGAM2)","2,3-BIPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE 2 (iPGAM2)"]
["AT3G14290","tan","Encodes 20S proteasome subunit PAE2 (PAE2) that has RNase activity.","20S PROTEASOME ALPHA SUBUNIT E2 (PAE2)","20S PROTEASOME ALPHA SUBUNIT E2 (PAE2)"]
["AT1G47250","tan","Encodes 20S proteasome subunit PAF2 (PAF2).","20S PROTEASOME ALPHA SUBUNIT F2 (PAF2)","20S PROTEASOME ALPHA SUBUNIT F2 (PAF2)"]
["AT4G14800","tan","Encodes 20S proteasome beta subunit PBD2 (PBD2).","20S PROTEASOME BETA SUBUNIT D2 (PBD2)","20S PROTEASOME BETA SUBUNIT D2 (PBD2)"]
["AT1G13060","tan","Encodes 20S proteasome beta subunit PBE1 (PBE1).","20S PROTEASOME BETA SUBUNIT E1 (PBE1)","20S PROTEASOME BETA SUBUNIT E1 (PBE1)"]
["AT5G40580","tan","Encodes 20S proteasome beta subunit PBB2 (PBB2).","20S PROTEASOME BETA SUBUNIT PBB2 (PBB2)","20S PROTEASOME BETA SUBUNIT PBB2 (PBB2)"]
["AT4G28470","tan","encoding the RPN subunits of the 26S proteasome","26S PROTEASOME REGULATORY SUBUNIT S2 1B (RPN1B)","26S PROTEASOME REGULATORY SUBUNIT S2 1B (RPN1B); (ATRPN1B)"]
["AT2G02500","tan","Encodes a protein with 4-Diphosphocytidyl-2C-methyl-D-erythritol synthase activity. The enzyme has an absolute requirement for divalent cations (Mg2+ reaches the highest catalytic activity).","(ISPD)","2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLTRANSFERASE (MCT); (ATMEPCT); (ISPD)"]
["AT4G03415","tan","Encodes a myristoylated 2C-type protein phosphatase that interacts with AGB1 and is localized to the plasma membrane.","2C-TYPE PROTEIN PHOSPHATASE 52 (PP2C52)","2C-TYPE PROTEIN PHOSPHATASE 52 (PP2C52)"]
["AT3G11630","tan","Encodes a 2-Cys peroxiredoxin (2-Cys PrxA) that contains two catalytic Cys residues. Functions in redox cascade with TrxL2 via the ferredoxin-thioredoxin reductase (FTR)/thioredoxin (Trx) pathway to mediate the light-responsive reductive control of target proteins. Continuously transfers reducing power from TrxL2 to H2O2.","2-CYS PEROXIREDOXIN A (2CPA)","2-CYS PEROXIREDOXIN A (2CPA)"]
["AT5G06290","tan","Encodes a 2-Cys peroxiredoxin (2-Cys PrxB) that contains two catalytic Cys residues. The mRNA is cell-to-cell mobile.","2-CYSTEINE PEROXIREDOXIN B (2-Cys Prx B)","2-CYS PEROXIREDOXIN B (2CPB);2-CYSTEINE PEROXIREDOXIN B (2-Cys Prx B)"]
["AT1G47290","tan","Encodes an enzyme with 3&#946;-hydroxysteroid dehydrogenase/C4-decarboxylase activity <i>in vitro</i>. The activity of the enzyme was determined using microsomal extracts of yeast overexpressing the <i>Arabidopsis</i> gene. Cytosolic fractions failed to be associated to the activity, leading to the speculation that the enzyme is membrane-bound.","3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1 (3BETAHSD/D1)","3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1 (AT3BETAHSD/D1);3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1 (3BETAHSD/D1)"]
["AT2G26260","tan","Encodes an enzyme with 3&#946;-hydroxysteroid dehydrogenase/C4-decarboxylase activity <i>in vitro</i>. The activity of the enzyme was determined using microsomal extracts of yeast overexpressing the <i>Arabidopsis</i> gene. Cytosolic fractions failed to be associated to the activity, leading to the speculation that the enzyme is membrane-bound.","3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 2 (3BETAHSD/D2)","3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 2 (AT3BETAHSD/D2);3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 2 (3BETAHSD/D2)"]
["AT2G26250","tan","epidermis-specific, encodes KCS10, a putative 3-ketoacyl-CoA synthase. probably involved in the synthesis of long-chain lipids found in the cuticle.","3-KETOACYL-COA SYNTHASE 10 (KCS10)","3-KETOACYL-COA SYNTHASE 10 (KCS10);FIDDLEHEAD (FDH)"]
["AT5G04530","tan","Encodes KCS19, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","3-KETOACYL-COA SYNTHASE 19 (KCS19)","3-KETOACYL-COA SYNTHASE 19 (KCS19)"]
["AT5G43760","tan","Encodes KCS20, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). The mRNA is cell-to-cell mobile.","3-KETOACYL-COA SYNTHASE 20 (KCS20)","3-KETOACYL-COA SYNTHASE 20 (KCS20)"]
["AT4G34030","tan","MCC-B is involved in leucine degradation in mitochondria. The active protein is a dimer of MCC-A and MCC-B. MCC-A is biotinylated whereas MCC-B is not. The mRNA is cell-to-cell mobile.","3-METHYLCROTONYL-COA CARBOXYLASE (MCCB)","3-METHYLCROTONYL-COA CARBOXYLASE (MCCB)"]
["AT4G23800","tan","Encodes a protein containing three copies of the HMG (high mobility group)-box domain. The two Arabidopsis 3xHMG-box proteins are: AT4G11080 (3xHMG-box1) and AT4G23800 (3xHMG-box2). Interacts with mitotic and meiotic chromosomes.","3XHIGH MOBILITY GROUP-BOX2 (3xHMG-box2)","3XHIGH MOBILITY GROUP-BOX2 (3xHMG-box2)"]
["AT5G13050","tan","5-Formyltetrahydrofolate cycloligase (5-CHO-THF cycloligase - AT5G13050.1) regulates/influences under photorespiratory conditions the activity of another gene product, i.e. serine hydroxymethyltransferase (SHMT) due to accumulating amounts of 5-Formyltetrahydrofolate","5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE (5-FCL)","5-FORMYLTETRAHYDROFOLATE CYCLOLIGASE (5-FCL)"]
["AT3G17210","tan","Encodes a heat stable protein with antimicrobial and antifungal activity.","HEAT STABLE PROTEIN 1 (HS1)","A. THALIANA HEAT STABLE PROTEIN 1 (ATHS1);HEAT STABLE PROTEIN 1 (HS1)"]
["AT1G06390","tan","encodes a GSK3/shaggy-like protein kinase. Gene expression is induced by NaCl and ABA but not KCl, suggesting that this gene may be involved in response to osmotic stress. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts.","GSK3/SHAGGY-LIKE PROTEIN KINASE 1 (GSK1)","A. THALIANA SHAGGY-LIKE KINASE GROUP 2 3 (ATSK2-3);BIN2-LIKE 2 (BIL2); (ATGSK1);SHAGGY-LIKE PROTEIN KINASE 22 (ATSK22);SHAGGY-LIKE PROTEIN KINASE 22 (SK22);GSK3/SHAGGY-LIKE PROTEIN KINASE 1 (GSK1)"]
["AT2G40220","tan","Encodes a member of the DREB subfamily A-3 of ERF/AP2 transcription factor family (ABI4). The protein contains one AP2 domain. There is only one member in this family. Involved in abscisic acid (ABA) signal transduction, ABA-mediated glucose response, and hexokinase-dependent sugar responses. Acts downstream of GUN1 in retrograde signaling. Expressed most abundantly in developing siliques and to a lesser degree in seedlings.","ABA INSENSITIVE 4 (ABI4)","ABA INSENSITIVE 4 (ABI4);SUCROSE UNCOUPLED 6 (SUN6);SUGAR-INSENSITIVE 5 (SIS5);IMPAIRED SUCROSE INDUCTION 3 (ISI3);GLUCOSE INSENSITIVE 6 (GIN6);SALOBRENO 5 (SAN5); (ATABI4)"]
["AT3G08550","tan","mutant is Dwarfed and shows defects in cell elongation; Cellulose deficient; Plasma Membrane Protein","KOBITO (KOB1)","ABA INSENSITIVE 8 (ABI8);KOBITO (KOB1);ELONGATION DEFECTIVE 1 (ELD1)"]
["AT4G38480","tan","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)","ABA-HYPERSENSITIVE DCAF 1 (ABD1)","ABA-HYPERSENSITIVE DCAF 1 (ABD1)"]
["AT2G46490","tan","ABA-induced serine-rich transcription repressor; functions redundantly together with ASR1 to regulate ABA responses.","ABA-INDUCED SERINE-RICH REPRESSOR 2 (ASR2)","ABA-INDUCED SERINE-RICH REPRESSOR 2 (ASR2)"]
["AT3G02480","tan","LEA protein that is up-regulated by ABA, NaCl and mannitol,and light deprivation. Expression is regulated by ABI5 where it functions downstream in light induced leaf senescence pathway.","ABA-RESPONSE PROTEIN (ABR)","ABA-RESPONSE PROTEIN (ABR)"]
["AT4G28630","tan","Half-molecule ABC transporter ATM1. Arabidopsis thaliana has three ATM genes, namely ATM1, ATM2 and ATM3. Only ATM3 has an important function for plant growth.","ATP-BINDING CASSETTE B23 (ABCB23)","ABC TRANSPORTER OF THE MITOCHONDRION 1 (ATM1); (ATATM1);ATP-BINDING CASSETTE B23 (ABCB23)"]
["AT1G03680","tan","Encodes a m-type thioredoxin (Trx-m1) localized in chloroplast stroma.","THIOREDOXIN M-TYPE 1 (THM1)","ABC TRANSPORTER OF THE MITOCHONDRION 1 (ATM1);ARABIDOPSIS THIOREDOXIN M-TYPE 1 (ATM1);THIOREDOXIN M-TYPE 1 (TRX-M1);THIOREDOXIN M-TYPE 1 (THM1);THIOREDOXIN M-TYPE 1 (ATHM1)"]
["AT3G49290","tan","One of four ABI-like proteins.","ABL INTERACTOR-LIKE PROTEIN 2 (ABIL2)","ABL INTERACTOR-LIKE PROTEIN 2 (ABIL2)"]
["AT2G45190","tan","Encodes a member of the YABBY family of transcriptional regulators that is involved in abaxial cell type specification in leaves and fruits. YAB1 acts in a non-cell autonomous fashion within the meristem to affect phyllotactic patterning. The non-autonomous effect on the central region of the meristem is mediated through the activity if Lateral Suppressor (LAS).","ABNORMAL FLORAL ORGANS (AFO)","ABNORMAL FLORAL ORGANS (AFO);FILAMENTOUS FLOWER (FIL);YABBY1 (YAB1)"]
["AT2G20300","tan","Encodes ABNORMAL LEAF SHAPE 2 (ALE2), a receptor-like protein kinase (RLK) with a cluster of basic amino acid residues followed by a cysteine-containing sequence in the putative extracellular domain. Function together with ACR4 (Arabidopsis homolog of the Crinkly4) and ALE1 in positively regulating protoderm-specific gene expression and for the formation of leafy organs. ale2 mutants have various epidermal defects, including disorganization of epidermis-related tissues, defects in the leaf cuticle and the fusion of organs.","ABNORMAL LEAF SHAPE 2 (ALE2)","ABNORMAL LEAF SHAPE 2 (ALE2)"]
["AT5G14850","tan","Encodes a putative mannosyltransferase homolog to human PIG-B and yeast GPI10, both of which are involved in the biosynthesis of glycosylphosphatidylinositol (GPI) anchors. Disruption of the gene affects COBRA-LIKE10 localization, a GPI-anchored protein (GPI-AP) important for pollen tube growth and guidance.","ABNORMAL POLLEN TUBE GUIDANCE 1 (APTG1)","ABNORMAL POLLEN TUBE GUIDANCE 1 (APTG1)"]
["AT2G36080","tan","Encodes a plant-specific B3 DNA-binding domain transcription factor. Has transcription repressor activity.","ABNORMAL SHOOT 2 (ABS2)","ABNORMAL SHOOT 2 (ABS2);NGATHA-LIKE 1 (NGAL1)"]
["AT1G67080","tan","Encodes a protein involved in the photoprotection of PSII. An aba4-1 mutant completely lacks neoxanthin,a component of the chromophore of the peripheral antenna system in PSII. ABA4 is required for neoxanthin biosynthesis, an intermediary step in abscisic acid biosynthesis, but no catalytic activity has been detected for the ABA4 protein.","ABSCISIC ACID (ABA)-DEFICIENT 4 (ABA4)","ABSCISIC ACID (ABA)-DEFICIENT 4 (ABA4)"]
["AT4G34000","tan","Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.","ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3 (ABF3)","ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3 (ABF3);DC3 PROMOTER-BINDING FACTOR 5 (DPBF5); (ATABF3)"]
["AT2G19590","tan","encodes a protein whose sequence is similar to 1-aminocyclopropane-1-carboxylate oxidase","ACC OXIDASE 1 (ACO1)","ACC OXIDASE 1 (ACO1); (ATACO1)"]
["AT1G16880","tan","Encodes a ACT domain-containing protein. The ACT domain, named after bacterial aspartate kinase, chorismate mutase and TyrA (prephenate dehydrogenase), is a regulatory domain that serves as an amino acid-binding site in feedback-regulated amino acid metabolic enzymes. The mRNA is cell-to-cell mobile.","ACT DOMAIN REPEATS 11 (ACR11)","ACT DOMAIN REPEATS 11 (ACR11)"]
["AT5G04740","tan","Encodes a ACT domain-containing protein. The ACT domain, named after bacterial aspartate kinase, chorismate mutase and TyrA (prephenate dehydrogenase), is a regulatory domain that serves as an amino acid-binding site in feedback-regulated amino acid metabolic enzymes.","ACT DOMAIN REPEATS 12 (ACR12)","ACT DOMAIN REPEATS 12 (ACR12)"]
["AT2G37620","tan","Member of the actin gene family. Expressed in mature pollen.","ACTIN 1 (ACT1)","ACTIN 1 (ACT1);ARABIDOPSIS ACTIN 1 (AAc1)"]
["AT5G59890","tan","actin depolymerizing factor 4 (ADF4) mRNA, complete cds","ACTIN DEPOLYMERIZING FACTOR 4 (ADF4)","ACTIN DEPOLYMERIZING FACTOR 4 (ADF4); (ATADF4)"]
["AT2G16700","tan","Encodes actin depolymerizing factor 5 (ADF5). Involved in actin cytoskeleton remodeling during a variety of processes including pollen tube growth and stomatal movement.","ACTIN DEPOLYMERIZING FACTOR 5 (ADF5)","ACTIN DEPOLYMERIZING FACTOR 5 (ADF5); (ATADF5)"]
["AT2G30910","tan","actin-related protein C1A;(source:Araport11)","ACTIN-RELATED PROTEIN C1A (ARPC1A)","ACTIN-RELATED PROTEIN C1 (ARPC1);ACTIN-RELATED PROTEIN C1A (ARPC1A)"]
["AT1G33560","tan","Encodes a NBS-LRR disease resistance protein that possesses N-terminal kinase subdomains. Activation tagged mutant of ADR1 showed elevated levels of SA and reactive oxygen species in addition to number of defense gene transcripts. Exhibits resistance to number of microbial pathogens.","ACTIVATED DISEASE RESISTANCE 1 (ADR1)","ACTIVATED DISEASE RESISTANCE 1 (ADR1)"]
["AT4G29140","tan","Encodes Activated Disease Susceptibility 1 (ADS1), a putative MATE (multidrug and toxic compound extrusion) transport protein that negatively regulates plant disease resistance.","ACTIVATED DISEASE SUSCEPTIBILITY 1 (ADS1)","ACTIVATED DISEASE SUSCEPTIBILITY 1 (ADS1);ALTERED DEVELOPMENT PROGRAM 1 (ADP1);ARABIDOPSIS ABNORMAL SHOOT3 (ABS3)"]
["AT1G73250","tan","encodes a bifunctional 3, 5-epimerase-4-reductase in L-fucose synthesis and converts GDP-D-mannose to GDP-L-fucose in vitro along with MUR1 (GDP-D-mannose 4,6-dehydratase). It is expressed in all tissues examined, but most abundantly in roots and flowers.","GDP-4-KETO-6-DEOXYMANNOSE-3,5-EPIMERASE-4-REDUCTASE 1 (GER1)","ACTIVATING TRANSCRIPTION FACTOR 5 (ATFX);GDP-4-KETO-6-DEOXYMANNOSE-3,5-EPIMERASE-4-REDUCTASE 1 (GER1)"]
["AT4G14070","tan","Plastidic acyl activating enzyme involved in the elongation of exogenous medium-chain fatty acids to 16- and 18-carbon fatty acids.","ACYL-ACTIVATING ENZYME 15 (AAE15)","ACYL-ACTIVATING ENZYME 15 (AAE15)"]
["AT1G55320","tan","Encodes a protein with similarity to acyl activating enzymes. AAE18 is localized to the peroxisome where it may be involved in metabolism of auxin precursors to active auxins.","ACYL-ACTIVATING ENZYME 18 (AAE18)","ACYL-ACTIVATING ENZYME 18 (AAE18)"]
["AT4G14570","tan","Encodes an acylamino acid-releasing enzyme (AARE) catalyzing the N-terminal hydrolysis of N[alpha]-acylpeptides to release N[alpha]-acylated amino acids The mRNA is cell-to-cell mobile.","ACYLAMINO ACID-RELEASING ENZYME (AARE)","ACYLAMINO ACID-RELEASING ENZYME (AARE); (AtAARE)"]
["AT3G05420","tan","Acyl-CoA binding protein with high affinity for oleoyl-CoA. Expressed in all plant organs. Involved in fatty acid transport. Plays a role in determining seed oil content.","ACYL-COA BINDING PROTEIN 4 (ACBP4)","ACYL-COA BINDING PROTEIN 4 (ACBP4); (ATACBP4)"]
["AT1G47830","tan","Part of adaptor protein (AP) complex which mediadates clathrin-dependent trafficking at the trans-Golgi network (TGN) and the plasma membrane, respectively. Mediates endocytosis.","ADAPTOR 55 PROTEIN 2 SMALL SUBUNIT (AP2S)","ADAPTOR 55 PROTEIN 2 SMALL SUBUNIT (AP2S)"]
["AT3G50860","tan","Part of adaptor protein (AP) complex which mediadates clathrin-dependent trafficking at the trans-Golgi network (TGN) and the plasma membrane, respectively.","ADAPTOR PROTEIN 3 ALPHA (AP-3 ALPHA)","ADAPTOR PROTEIN 3 ALPHA (AP-3 ALPHA); (AP3&#963;)"]
["AT2G19790","tan","Encodes a component of the AP4 complex and is involved in vacuolar sorting of storage proteins.","ADAPTOR PROTEIN COMPLEX 4S (AP4S)","ADAPTOR PROTEIN COMPLEX 4S (AP4S)"]
["AT1G27450","tan","Adenosine phosphoribosyl transferase(E.C:2.4.2.7), involved in the one-step salvage of adenine to AMP.","ADENINE PHOSPHORIBOSYL TRANSFERASE 1 (APT1)","ADENINE PHOSPHORIBOSYL TRANSFERASE 1 (APT1)"]
["AT3G09820","tan","Involved in the salvage synthesis of adenylates and methyl recycling","ADENOSINE KINASE 1 (ADK1)","ADENOSINE KINASE 1 (ADK1); (ATADK1)"]
["AT5G47840","tan","adenosine monophosphate kinase;(source:Araport11)","ADENOSINE MONOPHOSPHATE KINASE (AMK2)","ADENOSINE MONOPHOSPHATE KINASE (AMK2)"]
["AT5G48300","tan","Encodes the small subunit of ADP-glucose pyrophosphorylase. The small subunit is the catalytic isoform responsible for ADP-glucose pyrophosphorylase activity. The presence of the small subunit is required for large subunit stability. Two isoforms of the small subunit (ApS1 and ApS2) have been described. ApS1 is the major small subunit isoform present in all plant tissues tested. The mRNA is cell-to-cell mobile.","ADP GLUCOSE PYROPHOSPHORYLASE 1 (ADG1)","ADP GLUCOSE PYROPHOSPHORYLASE 1 (ADG1);ADP-GLUCOSE PYROPHOSPHORYLASE SMALL SUBUNIT 1 (APS1)"]
["AT1G23490","tan","Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. A member of ARF GTPase family. Arabidopsis has 21 known members, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.","ADP-RIBOSYLATION FACTOR 1 (ARF1)","ADP-RIBOSYLATION FACTOR 1A (ATARFA1A);ADP-RIBOSYLATION FACTOR 1 (ATARF1);ADP-RIBOSYLATION FACTOR (ATARF);ADP-RIBOSYLATION FACTOR 1 (ARF1)"]
["AT2G24765","tan","GTPase required for Golgi targeting of GRIP domain proteins. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner","ADP-RIBOSYLATION FACTOR 3 (ARF3)","ADP-RIBOSYLATION FACTOR 3 (ARF3);ARF-LIKE 1 (ATARL1);ARF-LIKE 1 (ARL1)"]
["AT1G10630","tan","A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.","ADP-RIBOSYLATION FACTOR A1F (ARFA1F)","ADP-RIBOSYLATION FACTOR A1F (ATARFA1F);ADP-RIBOSYLATION FACTOR A1F (ARFA1F)"]
["AT4G33300","tan","Encodes a member of the ADR1 family nucleotide-binding leucine-rich repeat (NB-LRR) immune receptors.","ADR1-LIKE 1 (ADR1-L1)","ADR1-LIKE 1 (ADR1-L1)"]
["AT3G44610","tan","Kinase involved in the first positive phototropism and gravitropism. Phosphorylates serine residues in the cytoplasmic loop of PIN1 and shares phosphosite preferences with D6PK. Critical component for both hypocotyl phototropism and gravitropism, control tropic responses mainly through regulation of PIN-mediated auxin transport by protein phosphorylation.","AGCVIII KINASE 1-12 (AGC1-12)","AGCVIII KINASE 1-12 (AGC1-12)"]
["AT1G74800","tan","Encodes a Golgi-localized hydroxyproline galactosyltransferase GALT5. Functions together with GALT2 as redundant GALTs that control AGP (arabinogalactan-proteins) O-glycosylation, which is essential for normal growth and development. Mutants display multiple phenotypes including reduced root hair growth.","AGP GALACTOSYLTRANSFERASE5 (GALT5)","AGP GALACTOSYLTRANSFERASE5 (GALT5)"]
["AT3G63410","tan","Encodes a MPBQ/MSBQ methyltransferase located in the chloroplast inner envelope membrane. Mutant plants lack plastoquinone (PQ), suggesting that the APG1 protein is involved in the methylation step of PQ biosynthesis. The gene product is also involved in tocopherol (vitamin E) biosynthesis.","ALBINO OR PALE GREEN MUTANT 1 (APG1)","ALBINO OR PALE GREEN MUTANT 1 (APG1);VITAMIN E DEFECTIVE 3 (VTE3);INNER ENVELOPE PROTEIN 37 (IEP37); (E37)"]
["AT5G67110","tan","encodes a myc/bHLH transcription factor-like protein. Gene product is involved in fruit dehiscence. Mutant siliques fail to dehisce.","ALCATRAZ (ALC)","ALCATRAZ (ALC)"]
["AT1G74920","tan","ALDH10A8 encodes a protein that has not been functionally characterized, but it is similar to an Arabidopsis protein that has betaine aldehyde dehydrogenase and aminoaldehyde dehydrogenase activity. ALDH10A8 localizes to leucoplasts. aldh10a8 mutant plants are more susceptible to NaCl and dehydration stress.","ALDEHYDE DEHYDROGENASE 10A8 (ALDH10A8)","ALDEHYDE DEHYDROGENASE 10A8 (ALDH10A8)"]
["AT2G24270","tan","Encodes a protein with non-phosphorylating NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity. The activity of the enzyme was determined from leaf extracts; the enzyme has not been purified to confirm activity.","ALDEHYDE DEHYDROGENASE 11A3 (ALDH11A3)","ALDEHYDE DEHYDROGENASE 11A3 (ALDH11A3)"]
["AT5G62530","tan","Encodes mitochondrial Delta-pyrroline-5-carboxylate dehydrogenase. Involved in the catabolism of proline to glutamate, protection from proline toxicity, and the remobilization of carbon and nitrogen from senescing leaves. Induced at pathogen infection sites. P5CDH and SRO5 (an overlapping gene in the sense orientation) generate 24-nt and 21-nt siRNAs, which together are components of a regulatory loop controlling reactive oxygen species (ROS) production and stress response.","ALDEHYDE DEHYDROGENASE 12A1 (ALDH12A1)","ALDEHYDE DEHYDROGENASE 12A1 (ALDH12A1);DELTA1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE (P5CDH);ARABIDOPSIS THALIANA DELTA1-PYRROLINE-5-CARBOXYLATE DEHYDROGENASE (ATP5CDH)"]
["AT4G34240","tan","Encodes an aldehyde dehydrogenase induced by ABA and dehydration that can oxidize saturated aliphatic aldehydes. It is also able to oxidize beta-unsaturated aldehydes, but not aromatic aldehydes. ALDH3I1 was able to use both NAD+ and NADP+ as cofactors.","ALDEHYDE DEHYDROGENASE 3I1 (ALDH3I1)","ALDEHYDE DEHYDROGENASE 3I1 (ALDH3I1);ALDEHYDE DEHYDROGENASE 3 (ALDH3)"]
["AT2G37790","tan","NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11)","ALDO-KETO REDUCTASE FAMILY 4 MEMBER C10 (AKR4C10)","ALDO-KETO REDUCTASE FAMILY 4 MEMBER C10 (AKR4C10)"]
["AT5G60360","tan","Encodes a senescence-associated thiol protease. The mRNA is cell-to-cell mobile.","ALEURAIN-LIKE PROTEASE (ALP)","ALEURAIN-LIKE PROTEASE (ALP);ALEURAIN-LIKE PROTEASE (AALP)"]
["AT3G06500","tan","Encodes an alkaline/neutral invertase which localizes in mitochondria. It may be modulating hormone balance in relation to the radicle emergence. Mutants display severely reduced shoot growth and reduced oxygen consumption. Mutant root development is not affected as reported for A/N-InvA mutant (inva) plants. The mRNA is cell-to-cell mobile.","ALKALINE/NEUTRAL INVERTASE C (A/N-InvC)","ALKALINE/NEUTRAL INVERTASE C (A/N-InvC)"]
["AT1G62020","tan","Member of the Coat Protein I (COPI) complex is a seven-subunit coatomer complex consisting of the &#945;, &#946;, &#946;&#8242;, &#947;, &#948;, &#949;, and &#950; proteins. COPI is required for retrograde transport from the Golgi to the endoplasmic reticulum, Golgi maintenance, and cell plate formation. Required for the acceptance of compatible pollen.","ALPHA1 COAT PROTEIN (alpha1-COP)","ALPHA1 COAT PROTEIN (alpha1-COP)"]
["AT3G29320","tan","Encodes a plastidic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for maltooligosaccharides, such as maltoheptaose. The mRNA is cell-to-cell mobile.","ALPHA-GLUCAN PHOSPHORYLASE 1 (PHS1)","ALPHA-GLUCAN PHOSPHORYLASE 1 (PHS1)"]
["AT2G28100","tan","Encodes a protein with &#945;-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFUC1 was not able to act on XXFG substrates, at least when heterologously expressed in <i>Pichia pastoris</i>. The enzyme has been postulated to act on fucosylated substrates other than xyloglucan oligosaccharides. was shown (<i>Pichia pastoris</i>) to hydrolyze fucose in 3- and 4-linkage , hence was characterized as alpha-L-3,4-fucosidase The mRNA is cell-to-cell mobile.","ALPHA-L-FUCOSIDASE 1 (FUC1)","ALPHA-L-FUCOSIDASE 1 (ATFUC1);ALPHA-L-FUCOSIDASE 1 (FUC1)"]
["AT1G08980","tan","Encodes an enzyme with similarity to bacterial acylamidohydrolases and exhibits indole-3-acetamide amidohydrolase activity in vitro. This enzyme may be involved in the in vivo biosynthesis of indole-acetic acid from indole-3-acetamide, a native metabolite of A. thaliana. It appears to exist as a monomer.","AMIDASE 1 (AMI1)","AMIDASE-LIKE PROTEIN 1 (ATAMI1);AMIDASE 1 (AMI1);ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-I (ATTOC64-I);TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-I (TOC64-I)"]
["AT5G09220","tan","member of AAAP family The mRNA is cell-to-cell mobile.","AMINO ACID PERMEASE 2 (AAP2)","AMINO ACID PERMEASE 2 (AAP2)"]
["AT5G49630","tan","Is a high affinity amino acid transporter capable of transporting aspartate and tryptophan. May be involved in the amino acid uptake from xylem.","AMINO ACID PERMEASE 6 (AAP6)","AMINO ACID PERMEASE 6 (AAP6)"]
["AT1G01510","tan","Encodes a homolog of human CtBP. Mutant has longer and thicker leaves than wild type. Involved in controlling polar cell expansion in the leaf width direction. It has been shown to localize to cytosolic stress granules and is involved in their formation.","ANGUSTIFOLIA (AN)","ANGUSTIFOLIA (AN);DETORQUEO (DOQ)"]
["AT4G32410","tan","Encodes a cellulose synthase isomer. CESA1 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA1, along with CESA3 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. lasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening.","CELLULOSE SYNTHASE 1 (CESA1)","ANISOTROPY1 (ANY1);CELLULOSE SYNTHASE 1 (CESA1);RADIALLY SWOLLEN 1 (RSW1);CELLULOSE SYNTHASE 1 (AtCESA1)"]
["AT4G13540","tan","ADR is a peroxisome localized, myristoylated protein. It is expressed in flowers and plays a role in suppressing ROS accumulation in anthers. Overexpression results in reduced ROS, lower levels of NST1 and NST2 and, consequently alterations in lignification of the anther endothecium resulting in male sterility.","ANTHER DEHISCENCE REPRESSOR (ADR)","ANTHER DEHISCENCE REPRESSOR (ADR)"]
["AT2G29690","tan","Encode a functional anthranilate synthase protein. Expressed at a constitutive basal level. Expression was not induced by wounding nor bacterial pathogen infiltration. Involved in aromatic amino acid biosynthesis.","ANTHRANILATE SYNTHASE 2 (ASA2)","ANTHRANILATE SYNTHASE 2 (ASA2); (ATHANSYNAB)"]
["AT3G62530","tan","ARM-repeat superfamily protein containing a mitochondria-targeting peptide; pollen killer antidote of the pollen killer activity of locus PK3.","ANTIDOTE OF POLLEN KILLER ON CHROMOSOME 3 (APOK3)","ANTIDOTE OF POLLEN KILLER ON CHROMOSOME 3 (APOK3)"]
["AT2G31440","tan","Encodes a gamma-secretase subunit. Associates with other subunits in intracellular membrane compartments.","APH-1 (APH-1)","APH-1 (APH-1)"]
["AT5G18280","tan","Encodes an enzyme with ATPase and ADPase activity (an apyrase) that when mutated in combination with ATAPY1 causes a complete inhibition of pollen germination.","APYRASE 2 (APY2)","APYRASE 2 (APY2);APYRASE 2 (ATAPY2)"]
["AT4G19180","tan","Encodes a putative apyrase involved in pollen exine pattern formation and anther dehiscence.","APYRASE 7 (APY7)","APYRASE 7 (APY7); (ATAPY7)"]
["AT2G33470","tan","glycolipid transfer protein 1;(source:Araport11)","GLYCOLIPID TRANSFER PROTEIN 1 (GLTP1)","ARABIDOPSIS GLYCOLIPID TRANSFER PROTEIN 1 (ATGLTP1);GLYCOLIPID TRANSFER PROTEIN 1 (GLTP1)"]
["AT4G34840","tan","Encodes one of the 5'-methylthioadenosine nucleosidases (AT4G38800/MTN1; AT4G34840/MTN2). Double mutant, mtn1-1mtn2-1, retains approximately 14% of the MTN enzyme activity present in the wild type and displays a pleiotropic phenotype that includes altered vasculature and impaired fertility.","METHYLTHIOADENOSINE NUCLEOSIDASE 2 (MTN2)","ARABIDOPSIS METHYLTHIOADENOSINE NUCLEOSIDASE 2 (ATMTN2);ARABIDOPSIS METHYLTHIOADENOSINE NUCLEOSIDASE 2 (ATMTAN2);METHYLTHIOADENOSINE NUCLEOSIDASE 2 (MTN2);METHYLTHIOADENOSINE NUCLEOSIDASE 2 (MTAN2)"]
["AT4G05450","tan","Iron-Sulfur (Fe-S) cluster gene, plays a role in host and nonhost disease resistance by accumulation of defense-related metabolites.","MITOCHONDRIAL FERREDOXIN 1 (MFDX1)","ARABIDOPSIS MITOCHONDRIAL FERREDOXIN 1 (ATMFDX1);MITOCHONDRIAL FERREDOXIN 1 (MFDX1)"]
["AT2G32480","tan","Metalloprotease essential for plastid development. Located in the inner membrane of chloroplasts.","ARABIDOPSIS SERIN PROTEASE (ARASP)","ARABIDOPSIS SERIN PROTEASE (ARASP)"]
["AT1G74090","tan","encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates.","DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18 (SOT18)","ARABIDOPSIS SULFOTRANSFERASE 5B (ATST5B);DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18 (SOT18);DESULFO-GLUCOSINOLATE SULFOTRANSFERASE 18 (ATSOT18)"]
["AT3G03550","tan","RING/U-box superfamily protein;(source:Araport11)","ARABIDOPSIS T??XICOS EN LEVADURA 51 (ATL51)","ARABIDOPSIS T??XICOS EN LEVADURA 51 (ATL51)"]
["AT3G61550","tan","RING/U-box superfamily protein;(source:Araport11)","ARABIDOPSIS T??XICOS EN LEVADURA 68 (ATL68)","ARABIDOPSIS T??XICOS EN LEVADURA 68 (ATL68)"]
["AT1G22640","tan","MYB-type transcription factor (MYB3) that represses phenylpropanoid biosynthesis gene expression","MYB DOMAIN PROTEIN 3 (MYB3)","ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 3 (ATMYB3);MYB DOMAIN PROTEIN 3 (MYB3)"]
["AT5G11690","tan","mitochondrial inner membrane translocase","TRANSLOCASE INNER MEMBRANE SUBUNIT 17-3 (TIM17-3)","ARABIDOPSIS THALIANA TRANSLOCASE INNER MEMBRANE SUBUNIT 17-3 (ATTIM17-3);TRANSLOCASE INNER MEMBRANE SUBUNIT 17-3 (TIM17-3)"]
["AT5G64940","tan","ABC1K8 is a member of an atypical protein kinase family that is induced by heavy metals. Loss of function mutations affect the metabolic profile of chloroplast lipids. It appears to function along with ABC1K7 in mediating lipid membrane changes in response to stress. The mRNA is cell-to-cell mobile.","ABC2 HOMOLOG 13 (ATH13)","ARABIDOPSIS THALIANA ABC2 HOMOLOG 13 (ATATH13); (ABC1K8);OXIDATIVE STRESS-RELATED ABC1-LIKE PROTEIN 1 (OSA1);ABC2 HOMOLOG 13 (ATH13);A. THALIANA OXIDATIVE STRESS-RELATED ABC1-LIKE PROTEIN 1 (ATOSA1)"]
["AT1G67830","tan","Encodes a protein with &#945;-fucosidase activity. The activity was assessed on 2'-fucosyl-lactitol. AtFXG1 was able to remove the t-fucosyl residues of XXFG xyloglucan oligosaccharides.","ALPHA-FUCOSIDASE 1 (FXG1)","ARABIDOPSIS THALIANA ALPHA-FUCOSIDASE 1 (ATFXG1);ALPHA-FUCOSIDASE 1 (FXG1)"]
["AT3G46970","tan","Encodes a cytosolic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for branched polysaccharides, such as glycogen.","ALPHA-GLUCAN PHOSPHORYLASE 2 (PHS2)","ARABIDOPSIS THALIANA ALPHA-GLUCAN PHOSPHORYLASE 2 (ATPHS2);ALPHA-GLUCAN PHOSPHORYLASE 2 (PHS2)"]
["AT1G54180","tan","Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.","BREVIS RADIX-LIKE 3 (BRX-LIKE3)","ARABIDOPSIS THALIANA BREVIS RADIX-LIKE 3 (ATBRXL3);BREVIS RADIX-LIKE 3 (BRX-LIKE3)"]
["AT5G13120","tan","Encodes a lumenal cyclophilin with peptidyl-prolyl isomerase activity that is associated with the NAD(P)H dehydrogenase complex in stromal regions of the thylakoid membrane. It is likely to be important for the accumulation of the hydrophobic domain of the NAD(P)H dehydrogenase complex. This complex is associated with PSI and is responsible for the reduction of plastoquinone.","PHOTOSYNTHETIC NDH SUBCOMPLEX L 5 (Pnsl5)","ARABIDOPSIS THALIANA CYCLOPHILIN 20-2 (ATCYP20-2);PHOTOSYNTHETIC NDH SUBCOMPLEX L 5 (Pnsl5);CYCLOPHILIN 20-2 (CYP20-2)"]
["AT3G22880","tan","Expression of the AtDMC1 is restricted to pollen mother cells in anthers and to megaspore mother cells in ovules. Similar to meiosis-specific yeast DMC gene.","DISRUPTION OF MEIOTIC CONTROL 1 (DMC1)","ARABIDOPSIS THALIANA DISRUPTION OF MEIOTIC CONTROL 1 (ATDMC1);DISRUPTION OF MEIOTIC CONTROL 1 (DMC1);ARABIDOPSIS HOMOLOG OF LILY MESSAGES INDUCED AT MEIOSIS 15 (ARLIM15)"]
["AT1G10130","tan","Encodes a golgi localized P2A-type Ca2+ ATPase involved in Mn nutrition and homeostasis.","ENDOPLASMIC RETICULUM-TYPE CALCIUM-TRANSPORTING ATPASE 3 (ECA3)","ARABIDOPSIS THALIANA ER-TYPE CA2+-ATPASE 3 (ATECA3);ENDOPLASMIC RETICULUM-TYPE CALCIUM-TRANSPORTING ATPASE 3 (ECA3)"]
["AT5G62700","tan","encodes tubulin beta-2/beta-3 chain The mRNA is cell-to-cell mobile.","TUBULIN BETA CHAIN 3 (TUB3)","ARABIDOPSIS THALIANA GAMMA TUBULIN COMPLEX PROTEIN 3 (ATGCP3);TUBULIN BETA CHAIN 3 (TUB3)"]
["AT2G47730","tan","Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).","GLUTATHIONE S-TRANSFERASE PHI 8 (GSTF8)","ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE PHI 8 (ATGSTF8);GLUTATHIONE S-TRANSFERASE (CLASS PHI) 5 (ATGSTF5); (GST6);GLUTATHIONE S-TRANSFERASE PHI 8 (GSTF8)"]
["AT2G19860","tan","Encodes a protein with hexokinase activity (AtHXK2) and acts as a sensor for plant sugar responses.","HEXOKINASE 2 (HXK2)","ARABIDOPSIS THALIANA HEXOKINASE 2 (ATHXK2);HEXOKINASE 2 (HXK2)"]
["AT4G24960","tan","Homologous to a eukaryote specific ABA- and stress-inducible gene first isolated from barley. Groups in one subfamily with ATHVA22E. Along with other members of the ATHVA22 family, it may be involved in regulation of autophagy during development. The mRNA is cell-to-cell mobile.","HVA22 HOMOLOGUE D (HVA22D)","ARABIDOPSIS THALIANA HVA22 HOMOLOGUE D (ATHVA22D);HVA22 HOMOLOGUE D (HVA22D)"]
["AT1G03310","tan","Encodes a protein with strong similarity to isoamylase (EC:3.2.1.68) however lacks critical residues known to be important for activity. Appears to co localize with ISA1 in the chloroplast isoamylase complex. Mutations in this gene cause the loss of detectable isoamylase activity and the disruption of normal starch structure. It has been postulated that AtISA2 interacts with AtISA1 to form the Iso1 complex.","DEBRANCHING ENZYME 1 (DBE1)","ARABIDOPSIS THALIANA ISOAMYLASE 2 (ATISA2); (ISA2);DEBRANCHING ENZYME 1 (DBE1);BRANCHING ENZYME 2 (BE2); (ATBE2)"]
["AT3G14720","tan","member of MAP Kinase The mRNA is cell-to-cell mobile.","MAP KINASE 19 (MPK19)","ARABIDOPSIS THALIANA MAP KINASE 19 (ATMPK19);MAP KINASE 19 (MPK19)"]
["AT3G50440","tan","Encodes a protein shown to have methyl jasmonate esterase activity in vitro. This protein does not act on methyl IAA, MeSA, MeGA4, or MEGA9 in vitro.","METHYL ESTERASE 10 (MES10)","ARABIDOPSIS THALIANA METHYL ESTERASE 10 (ATMES10);METHYL ESTERASE 10 (MES10)"]
["AT1G16700","tan","Part of mitochondrial complex I (CI), which plays a crucial role in oxidising NADH generated by the metabolism (including photorespiration) and thereby participates in the mitochondrial electron transfer chain feeding oxidative phosphorylation that generates ATP.","(NDUFS8.1)","ARABIDOPSIS THALIANA MILDEW RESISTANCE LOCUS O 14 (AtMLO14); (NDUFS8.1)"]
["AT1G79750","tan","The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed.","NADP-MALIC ENZYME 4 (NADP-ME4)","ARABIDOPSIS THALIANA NADP-MALIC ENZYME 4 (ATNADP-ME4);NADP-MALIC ENZYME 4 (NADP-ME4)"]
["AT1G28960","tan","Encodes a ppGpp pyrophosphohydrolase.","NUDIX HYDROLASE HOMOLOG 15 (NUDX15)","ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15 (ATNUDT15);NUDIX HYDROLASE HOMOLOG 15 (ATNUDX15);NUDIX HYDROLASE HOMOLOG 15 (NUDX15)"]
["AT2G36910","tan","Belongs to the family of ATP-binding cassette (ABC) transporters. Also known as AtMDR1.Possibly regulates auxin-dependent responses by influencing basipetal auxin transport in the root. Exerts nonredundant, partially overlapping functions with the ABC transporter encoded by AT3G28860. PGP1 mediates cellular efflux of IAA and interacts with PIN genes that may confer an accelerated vectoral component to PGP-mediated transport. The non-polar localization of PGP1 at root and shoot apices, where IAA gradient-driven transport is impaired, may be required to confer directionality to auxin transport in those tissues. The mRNA is cell-to-cell mobile.","ATP-BINDING CASSETTE B1 (ABCB1)","ARABIDOPSIS THALIANA P GLYCOPROTEIN1 (ATPGP1);P-GLYCOPROTEIN 1 (PGP1);ATP-BINDING CASSETTE B1 (ABCB1)"]
["AT3G50110","tan","Encodes a phosphatase with low in vitro tyrosine phosphatase activity that is NOT capable of dephosphorylating in vitro the 3'phosphate group of PI3P, PI(3,4)P2.","PTEN 3 (PEN3)","ARABIDOPSIS THALIANA PHOSPHATASE AND TENSIN HOMOLOG DELETED ON CHROMOSOME TEN 3 (ATPEN3);PTEN 3 (PEN3);PHOSPHATASE AND TENSIN HOMOLOG DELETED ON CHROMOSOME TEN 2B (PTEN2B)"]
["AT1G01690","tan","Encodes a novel plant-specific protein that is involved in meiotic double strand break formation.","PUTATIVE RECOMBINATION INITIATION DEFECTS 3 (PRD3)","ARABIDOPSIS THALIANA PUTATIVE RECOMBINATION INITIATION DEFECTS 3 (ATPRD3); (MER2);PUTATIVE RECOMBINATION INITIATION DEFECTS 3 (PRD3)"]
["AT5G26751","tan","Encodes a SHAGGY-related kinase involved in meristem organization. It regulates the redox stress response by phosphorylating glucose-6-phosphate dehydrogenase 6.Functions as a positive regulator of salt stress tolerance. Phosphorylates and enhances G6PD6 (At5g40760) activity","SHAGGY-RELATED KINASE 11 (SK 11)","ARABIDOPSIS THALIANA SHAGGY-RELATED KINASE 11 (ATSK11);ARABIDOPSIS GSK ALPHA (ASKALPHA);SHAGGY-RELATED KINASE 11 (SK 11)"]
["AT5G59300","tan","ubiquitin conjugating enzyme E2; may function together with UBC13 and UBC14 in the plant READ pathway, required in plant responses to multiple stress conditions.","UBIQUITIN CARRIER PROTEIN 7 (UBC7)","ARABIDOPSIS THALIANA UBIQUITIN CARRIER PROTEIN 7 (ATUBC7);UBIQUITIN CARRIER PROTEIN 7 (UBC7)"]
["AT4G19490","tan","Putative homolog of yeast Vps54. Thought to associate with POK and ATVPS53 in a plant GARP-like complex involved in the membrane trafficking system.","(VPS54)","ARABIDOPSIS THALIANA VPS54 HOMOLOG (ATVPS54); (VPS54);MODIFIED TRANSPORT TO THE VACUOLE 17 (MTV17)"]
["AT5G66070","tan","E3 ubiquitin ligase that functions in negative regulation of ABA signaling.","ABA-RELATED RING-TYPE E3 LIGASE (ATARRE)","ARABIDOPSIS TOXICOS EN LEVADURA 27 (ATL27);ABA-RELATED RING-TYPE E3 LIGASE (ATARRE)"]
["AT1G34350","tan","Encodes a putative transmembrane protein that has been localized around the nucleus and is involved in pollen germination and pollen tube growth.","ARABIDOPSIS TRANSMEMBRANE PROTEIN 18 (TMEM18)","ARABIDOPSIS TRANSMEMBRANE PROTEIN 18 (TMEM18)"]
["AT3G61640","tan","arabinogalactan protein 20;(source:Araport11)","ARABINOGALACTAN PROTEIN 20 (AGP20)","ARABINOGALACTAN PROTEIN 20 (AGP20);ARABINOGALACTAN PROTEIN 20 (AtAGP20)"]
["AT2G47930","tan","arabinogalactan protein 26;(source:Araport11)","ARABINOGALACTAN PROTEIN 26 (AGP26)","ARABINOGALACTAN PROTEIN 26 (AGP26);ARABIDOPSIS THALIANA ARABINOGALACTAN PROTEIN 26 (ATAGP26)"]
["AT2G45470","tan","Fasciclin-like arabinogalactan protein. Possibly involved in embryogenesis and seed development.","FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 (FLA8)","ARABINOGALACTAN PROTEIN 8 (AGP8);FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 (FLA8)"]
["AT2G14890","tan","putative proline-rich protein (At2g14890) mRNA, complete The mRNA is cell-to-cell mobile.","ARABINOGALACTAN PROTEIN 9 (AGP9)","ARABINOGALACTAN PROTEIN 9 (AGP9)"]
["AT4G05330","tan","A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.","ARF-GAP DOMAIN 13 (AGD13)","ARF-GAP DOMAIN 13 (AGD13)"]
["AT1G60860","tan","A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD2 belongs to the class 1, together with AGD1, AGD3, and AGD4.","ARF-GAP DOMAIN 2 (AGD2)","ARF-GAP DOMAIN 2 (AGD2);VAN3-LIKE PROTEIN2 (VAL2)"]
["AT4G17890","tan","A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.","ARF-GAP DOMAIN 8 (AGD8)","ARF-GAP DOMAIN 8 (AGD8)"]
["AT1G59980","tan","ARG1-like 2;(source:Araport11)","ARG1-LIKE 2 (ARL2)","ARF-LIKE 2 (ARL2);GRAVITY PERSISTENCE SIGNAL 4 (GPS4);ARG1-LIKE 2 (ARL2); (ATDJC39)"]
["AT2G16500","tan","Encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Promoter region of ADC1 contains 742-bp AT-rich transposable element, called AtATE, that belongs to the MITE families of repetitive elements.","ARGININE DECARBOXYLASE 1 (ADC1)","ARGININE DECARBOXYLASE 1 (ADC1); (ARGDC1); (ARGDC); (SPE1); (ATADC1)"]
["AT4G34710","tan","Encodes a arginine decarboxylase (ADC), a rate-limiting enzyme that catalyzes the first step of polyamine (PA) biosynthesis via ADC pathway in Arabidopsis thaliana. Arabidopsis genome has two ADC paralogs, ADC1 and ADC2. ADC2 is stress-inducible (osmotic stress). Double mutant analysis showed that ADC genes are essential for the production of PA, and are required for normal seed development. Overexpression causes phenotypes similar to GA-deficient plants and these plants show reduced levels of GA due to lower expression levels of AtGA20ox1, AtGA3ox3 and AtGA3ox1.","ARGININE DECARBOXYLASE 2 (ADC2)","ARGININE DECARBOXYLASE 2 (ADC2); (SPE2); (ATADC2)"]
["AT1G69440","tan","Encodes ARGONAUTE7, a member of the ARGONAUTE family, characterised by the presence of PAZ and PIWI domains. Involved in the regulation of developmental timing. Required for the accumulation of TAS3 ta-siRNAs but not for accumulation of miR171, miR173, miR390 or mi391. Localized in mature rosette leaves and floral buds.","ARGONAUTE7 (AGO7)","ARGONAUTE7 (AGO7);ZIPPY (ZIP)"]
["AT1G01950","tan","Encodes a member of the armadillo/beta-catenin repeat kinesin motor family. Mutants have twisted roots due to abnormal cell file rotation; the phenotype is dependent on microtubules.","ARMADILLO REPEAT KINESIN 2 (ARK2)","ARMADILLO REPEAT KINESIN 2 (ARK2);ARABIDOPSIS THALIANA KINESIN UNGROUPED CLADE, GENE B (AtKINUb)"]
["AT5G66200","tan","Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules.","ARMADILLO REPEAT ONLY 2 (ARO2)","ARMADILLO REPEAT ONLY 2 (ARO2)"]
["AT1G07890","tan","Encodes a cytosolic ascorbate peroxidase APX1. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. The mRNA is cell-to-cell mobile.","ASCORBATE PEROXIDASE 1 (APX1)","ASCORBATE PEROXIDASE 1 (APX1);MATERNAL EFFECT EMBRYO ARREST 6 (MEE6); (CS1); (ATAPX1); (ATAPX01)"]
["AT5G08100","tan","Encodes an asparaginase that catalyzes the degradation of L-asparagine to L-aspartic acid and ammonia.","ASPARAGINASE A1 (ASPGA1)","ASPARAGINASE A1 (ASPGA1)"]
["AT5G65010","tan","Encodes asparagine synthetase (ASN2).","ASPARAGINE SYNTHETASE 2 (ASN2)","ASPARAGINE SYNTHETASE 2 (ASN2)"]
["AT3G27090","tan","Constitutively expressed asparagine-rich protein containing a development and cell death domain. Acts with NRP1 to inhibit cell death.","ASPARAGINE-RICH PROTEIN 2 (NRP2)","ASPARAGINE-RICH PROTEIN 2 (NRP2)"]
["AT2G30970","tan","ASPARTATE AMINOTRANSFERASE 1","ASPARTATE AMINOTRANSFERASE 1 (ASP1)","ASPARTATE AMINOTRANSFERASE 1 (ASP1)"]
["AT5G19550","tan","Nitrogen metabolism. Major cytosolic isoenzyme controlling aspartate biosynthesis in the light. The mRNA is cell-to-cell mobile.","ASPARTATE AMINOTRANSFERASE 2 (ASP2)","ASPARTATE AMINOTRANSFERASE 2 (AAT2);ASPARTATE AMINOTRANSFERASE 2 (ASP2)"]
["AT5G13280","tan","Asp kinase inhibited by Lys and S-adenosylmethionine. Contains regulatory domains that belong to the ACT domain family, which allow binding to a extreme variety of ligands. Can function as a monomer or as a dimer with acetohydroxyacid synthase (HSDH).","ASPARTATE KINASE 1 (AK-LYS1)","ASPARTATE KINASE 1 (AK-LYS1);ASPARTATE KINASE (AK);ASPARTATE KINASE 1 (AK1)"]
["AT1G31230","tan","Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine.","ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE I (AK-HSDH I)","ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE (AK-HSDH);ASPARTATE KINASE-HOMOSERINE DEHYDROGENASE I (AK-HSDH I)"]
["AT3G17300","tan","COMPLEX 1 LYR-like protein;(source:Araport11)","AT3G17300 (EMB2786)","AT3G17300 (EMB2786)"]
["AT3G06590","tan","Encodes RITF1, a bHLH transcription factor that regulates the transcription of several genes involved in the detoxification of reactive oxygen species generated by salt stress.","ATBS1 INTERACTING FACTOR 2 (AIF2)","ATBS1 INTERACTING FACTOR 2 (AIF2);RSA1 INTERACTING TRANSCRIPTION FACTOR 1 (RITF1)"]
["AT3G17100","tan","sequence-specific DNA binding transcription factor;(source:Araport11)","ATBS1 INTERACTING FACTOR 3 (AIF3)","ATBS1 INTERACTING FACTOR 3 (AIF3)"]
["AT4G12050","tan","Putative AT-hook DNA-binding family protein;(source:Araport11)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 26 (AHL26)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 26 (AHL26)"]
["AT1G63470","tan","AT hook motif DNA-binding family protein;(source:Araport11)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 5 (AHL5)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 5 (AHL5)"]
["AT4G09650","tan","Encodes the chloroplast ATPase delta-subunit. The mRNA is cell-to-cell mobile.","ATP SYNTHASE DELTA-SUBUNIT GENE (ATPD)","ATP SYNTHASE DELTA-SUBUNIT GENE (ATPD);PIGMENT DEFECTIVE 332 (PDE332)"]
["ATCG00120","tan","Encodes the ATPase alpha subunit, which is a subunit of ATP synthase and part of the CF1 portion which catalyzes the conversion of ADP to ATP using the proton motive force. This complex is located in the thylakoid membrane of the chloroplast.","ATP SYNTHASE SUBUNIT ALPHA (ATPA)","ATP SYNTHASE SUBUNIT ALPHA (ATPA)"]
["AT5G61810","tan","Encodes the predominant of three APC isoforms in Arabidopsis, a calcium-dependent mitochondrial ATP-Mg/Pi transporter.","ATP/PHOSPHATE CARRIER 1 (APC1)","ATP/PHOSPHATE CARRIER 1 (APC1)"]
["AT5G51050","tan","Encodes an APC isoform in Arabidopsis, a calcium-dependent mitochondrial ATP-Mg/Pi transporter.","ATP/PHOSPHATE CARRIER 2 (APC2)","ATP/PHOSPHATE CARRIER 2 (APC2)"]
["AT1G71960","tan","Encodes a plasma membrane localized ABC transporter involved in abscisic acid transport and responses.","ATP-BINDING CASETTE G25 (ABCG25)","ATP-BINDING CASETTE G25 (ABCG25);ARABIDOPSIS THALIANA ATP-BINDING CASSETTE G25 (ATABCG25)"]
["AT2G39350","tan","Belongs to a clade of five Arabidopsis thaliana ABCG half-transporters that are required for synthesis of an effective suberin barrier in roots and seed coats (ABCG2, ABCG6, and ABCG20) and for synthesis of an intact pollen wall (ABCG1 and ABCG16).","ATP-BINDING CASSETTE G1 (ABCG1)","ATP-BINDING CASSETTE G1 (ABCG1);WHITE BROWN COMPLEX 1 (WBC1)"]
["AT1G31770","tan","Transmembrane cytokinin transporter.Responsible for acropetal translocation of cytokinins.","ATP-BINDING CASSETTE G14 (ABCG14)","ATP-BINDING CASSETTE G14 (ABCG14); (ATABCG14)"]
["AT3G21090","tan","ABC-2 type transporter family protein;(source:Araport11)","ATP-BINDING CASSETTE G15 (ABCG15)","ATP-BINDING CASSETTE G15 (ABCG15)"]
["AT1G10670","tan","One of the three genes encoding subunit A of the trimeric protein ATP Citrate Lyase. Antisense ACLA-1 plants cause a reduction in cytosolic acetyl-CoA metabolism and have upregulation of stress-related genes and down-regulation of primary metabolism and growth genes, suggesting the mutation restricts normal growth and developmental processes and puts the plant into a state of stress.","ATP-CITRATE LYASE A-1 (ACLA-1)","ATP-CITRATE LYASE A-1 (ACLA-1)"]
["AT3G06650","tan","One of the two genes encoding subunit B of the trimeric enzyme ATP Citrate lyase","ATP-CITRATE LYASE B-1 (ACLB-1)","ATP-CITRATE LYASE B-1 (ACLB-1)"]
["AT2G40800","tan","TIM domain protein. Associates with components of mitochondrial complex I and III. May be involved in biogenesis of respiratory chain components.","ATTIM21-LIKE 1 (ATTIM21L-1)","ATTIM21-LIKE 1 (ATTIM21L-1)"]
["AT4G29670","tan","Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.","ATYPICAL CYS HIS RICH THIOREDOXIN 2 (ACHT2)","ATYPICAL CYS HIS RICH THIOREDOXIN 2 (ACHT2)"]
["AT2G32980","tan","HAUS augmin-like complex subunit;(source:Araport11)","AUGMIN SUBUNIT 2 (AUG2)","AUGMIN SUBUNIT 2 (AUG2)"]
["AT1G50710","tan","HAUS augmin-like complex subunit;(source:Araport11)","AUGMIN SUBUNIT 4 (AUG4)","AUGMIN SUBUNIT 4 (AUG4)"]
["AT5G17620","tan","nuclear matrix protein;(source:Araport11)","AUGMIN SUBUNIT 7 (AUG7)","AUGMIN SUBUNIT 7 (AUG7)"]
["AT1G13210","tan","Autoinhibited Ca2+/ATPase II. ALA11 acts redundantly with ALA3, ALA4, ALA5, ALA9, ALA10 in root and shoot development as well as PIN trafficking and polarity .","AUTOINHIBITED CA2+/ATPASE II (ACA.l)","AUTOINHIBITED CA2+/ATPASE II (ACA.l);AMINOPHOSPHOLIPID ATPASE 11 (ALA11)"]
["AT3G57330","tan","Lesion mimic phenotype when mutation in the gene is combined with a mutation in ACA4. Lesion mimic phenotype of double knockout can be suppressed by nutritional supplements that increase anion levels (e.g. 15 mM nitrate, chloride, or phosphate.)ACA8 and ACA10, as well as ACA4 and ACA11, are critical in maintaining low resting cytosol Ca2+ level (DOI:10.1093/plphys/kiad047)","AUTOINHIBITED CA2+-ATPASE 11 (ACA11)","AUTOINHIBITED CA2+-ATPASE 11 (ACA11)"]
["AT4G12780","tan","Negative regulation of growth and endocytosis, most likely as a result of inhibition of the recruitment of clathrin to endocytic pits. Overexpression inhbits recruitment of clathrin resulting in negative regulation of endocytosis and developmental arrest.","AUXILIN-LIKE1 (AUXILIN-LIKE1)","AUXILIN-LIKE1 (AUXILIN-LIKE1)"]
["AT4G12770","tan","Negative regulation of growth and endocytosis, most likely as a result of inhibition of the recruitment of clathrin to endocytic pits.","AUXILIN-LIKE2 (AUXILIN-LIKE2)","AUXILIN-LIKE2 (AUXILIN-LIKE2)"]
["AT2G38120","tan","Encodes an auxin influx transporter. AUX1 resides at the apical plasma membrane of protophloem cells and at highly dynamic subpopulations of Golgi apparatus and endosomes in all cell types. AUX1 action in the lateral root cap and/or epidermal cells influences lateral root initiation and positioning. Shoot supplied ammonium targets AUX1 and inhibits lateral root emergence. The mRNA is cell-to-cell mobile.","AUXIN RESISTANT 1 (AUX1)","AUXIN RESISTANT 1 (AUX1);WAVY ROOTS 5 (WAV5); (PIR1);MODIFIER OF ARF7/NPH4 PHENOTYPES 1 (MAP1); (ATAUX1)"]
["AT3G26810","tan","Auxin F box protein, the dominant auxin receptor in roots.","AUXIN SIGNALING F-BOX 2 (AFB2)","AUXIN SIGNALING F-BOX 2 (AFB2)"]
["AT4G24390","tan","RNI-like superfamily protein. Auxin receptor F-box protein that is involved in response to the synthetic auxin, picloram.","AUXIN SIGNALING F-BOX 4 (AFB4)","AUXIN SIGNALING F-BOX 4 (AFB4)"]
["AT3G28930","tan","avrRpt2-induced gene that exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2. Protein has similarity to gamma-glutamyl cyclotransferases but lack that activity. Functions with AIG2B (AT3G28940) to regulate production of tryptophan secondary metabolites. Loss of function results in increased immunity to Pst DC3000.","AVRRPT2-INDUCED GENE 2 (AIG2)","AVRRPT2-INDUCED GENE 2 (AIG2);AVRRPT2 INDUCED GENE2A (AIG2A)"]
["AT4G34700","tan","Encodes the B22 subunit of eukaryotic mitochondrial Complex I. Mutation in the gene display pleiotropic phenotypes including shorter roots, smaller plants and delayed flowering. The mRNA is cell-to-cell mobile.","B22 SUBUNIT OF EUKARYOTIC MITOCHONDRIAL COMPLEX I (CIB22)","B22 SUBUNIT OF EUKARYOTIC MITOCHONDRIAL COMPLEX I (CIB22); (AtCIB22); (NDUFB9); (B22)"]
["AT2G35260","tan","Together with VAR2/AtFtsH2 synergistically regulates the accumulation of PSII reaction centre D1 protein during de-etiolation.","BALANCE OF CHLOROPHYLL METABOLISM 1 (BCM1)","BALANCE OF CHLOROPHYLL METABOLISM 1 (BCM1); (CBD1); (EVR2)"]
["AT5G65700","tan","Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs. The mRNA is cell-to-cell mobile.","BARELY ANY MERISTEM 1 (BAM1)","BARELY ANY MERISTEM 1 (BAM1)"]
["AT3G23210","tan","bHLH34 is a basic helix loop helix transcription factor. It can bind GAGA and E-box cis elements.It is induced by abiotic stressors including ABA, salt and glucose. PGR, a plasma membrane glucose responsive regulator is a target of bHLH34. Involved in Fe regulation.","BASIC HELIX-LOOP-HELIX 34 (bHLH34)","BASIC HELIX-LOOP-HELIX 34 (bHLH34);IRON DEFICIENCY TOLERANT1 (IDT1)"]
["AT5G15850","tan","Homologous to the flowering-time gene CONSTANS.","CONSTANS-LIKE 1 (COL1)","B-BOX DOMAIN PROTEIN 2 (BBX2); (ATCOL1);CONSTANS-LIKE 1 (COL1)"]
["AT1G06040","tan","Encodes salt tolerance protein (STO) which confers salt tolerance to yeast cells. Fully complements calcineurin deficient yeast but does not encode a phosphoprotein phosphatase. Sequence has similarities to CONSTANS. STO co-localizes with COP1 and plays a role in light signaling.STO transcript levels are regulated by photoperiod and phtyohormones. STO competes with FLC in the regulation of floral transition genes SOC1 and FT.","SALT TOLERANCE (STO)","B-BOX DOMAIN PROTEIN 24 (BBX24);SALT TOLERANCE (STO)"]
["AT5G48250","tan","B-box type zinc finger protein with CCT domain-containing protein;(source:Araport11)","B-BOX DOMAIN PROTEIN 8 (BBX8)","B-BOX DOMAIN PROTEIN 8 (BBX8)"]
["AT3G60080","tan","RING/U-box superfamily protein;(source:Araport11)","BCA2A ZINC FINGER ATL 13 (BTL13)","BCA2A ZINC FINGER ATL 13 (BTL13)"]
["AT5G62390","tan","A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development. Localized to the ER. Necessary for the proper maintenance of the unfolded protein response during heat and cold tolerance.","BCL-2-ASSOCIATED ATHANOGENE 7 (BAG7)","BCL-2-ASSOCIATED ATHANOGENE 7 (ATBAG7);BCL-2-ASSOCIATED ATHANOGENE 7 (BAG7)"]
["AT1G58230","tan","binding protein;(source:Araport11)","BEACH-DOMAIN HOMOLOG B (BCHB)","BEACH-DOMAIN HOMOLOG B (BCHB)"]
["AT2G45540","tan","WD-40 repeat family protein / beige-like protein;(source:Araport11)","BEACH-DOMAIN HOMOLOG C2 (BCHC2)","BEACH-DOMAIN HOMOLOG C2 (BCHC2)"]
["AT2G16400","tan","BEL1-like homeodomain 7;(source:Araport11)","BEL1-LIKE HOMEODOMAIN 7 (BLH7)","BEL1-LIKE HOMEODOMAIN 7 (BLH7)"]
["AT4G36780","tan","BES1/BZR1 homolog 2;(source:Araport11)","BES1/BZR1 HOMOLOG 2 (BEH2)","BES1/BZR1 HOMOLOG 2 (BEH2)"]
["AT5G46690","tan","beta HLH protein 71;(source:Araport11)","BETA HLH PROTEIN 71 (bHLH071)","BETA HLH PROTEIN 71 (bHLH071)"]
["AT3G15980","tan","Part of Coat Protein Complexes (COPs).The presence of &#946;?1-COP and &#946;?2-COP is required for female and male gametophyte development.","BETA PRIME2-COP (B?2-COP)","BETA PRIME2-COP (B?2-COP)"]
["AT4G31490","tan","Required for plant growth, salt tolerance, and maintenance of the structure of the Golgi apparatus.","BETA2 COAT PROTEIN (beta2-COP)","BETA2 COAT PROTEIN (beta2-COP)"]
["AT5G12250","tan","Encodes a beta-tubulin. Expression of TUB6 has been shown to decrease in response to cold treatment.","BETA-6 TUBULIN (TUB6)","BETA-6 TUBULIN (TUB6)"]
["AT4G00490","tan","Encodes a chloroplast beta-amylase. The enzyme activity is very weak compared to BAM1 and BAM3. It forms a tetramer whose activity requires K+ and exhibits sigmoidal kinetics Mutants of BAM2 have no visible phenotype.","BETA-AMYLASE 2 (BAM2)","BETA-AMYLASE 9 (BMY9);BETA-AMYLASE 2 (BAM2)"]
["AT1G45130","tan","beta-galactosidase 5;(source:Araport11)","BETA-GALACTOSIDASE 5 (BGAL5)","BETA-GALACTOSIDASE 5 (BGAL5); (ATBGAL5)"]
["AT5G63800","tan","Involved in mucilage formation. Mutants form columella and outer cell wall architecture of the mucilage cells resembles wild-type. However, mum2 seeds completely lack seed coat mucilage. This mutation appears to represent a later step in the development of this cell-type. Encodes a beta-galactosidase involved in seed coat mucilage biosynthesis. Member of Glycoside Hydrolase Family 35","MUCILAGE-MODIFIED 2 (MUM2)","BETA-GALACTOSIDASE 6 (BGAL6);MUCILAGE-MODIFIED 2 (MUM2)"]
["AT2G28470","tan","putative beta-galactosidase (BGAL8 gene)","BETA-GALACTOSIDASE 8 (BGAL8)","BETA-GALACTOSIDASE 8 (BGAL8)"]
["AT5G10560","tan","Glycosyl hydrolase family protein;(source:Araport11)","BETA-XYLOSIDASE6 (BXL6)","BETA-XYLOSIDASE6 (BXL6)"]
["AT2G26900","tan","Sodium Bile acid symporter family;(source:Araport11)","BILE ACID:SODIUM SYMPORTER FAMILY PROTEIN 2 (BASS2)","BILE ACID:SODIUM SYMPORTER FAMILY PROTEIN 2 (BASS2)"]
["AT5G57590","tan","Encodes a bifunctional enzyme with both dethiobiotin synthetase and diaminopelargonic acid aminotransferase activities that is involved in biotin synthesis.","BIOTIN AUXOTROPH 1 (BIO1)","BIOTIN AUXOTROPH 3 (BIO3);BIOTIN AUXOTROPH 1 (BIO1)"]
["AT5G07300","tan","Encodes a copine-like protein, which is a member of a newly identified class of calcium-dependent, phospholipid binding proteins that are present in a wide range of organisms.","BONZAI 2 (BON2)","BONZAI 2 (BON2)"]
["AT1G49840","tan","glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620);(source:Araport11)","BOUNDARY OF ROP DOMAIN5 (BDR5)","BOUNDARY OF ROP DOMAIN5 (BDR5)"]
["AT4G17720","tan","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)","BPA1-LIKE 1 (BPL1)","BPA1-LIKE 1 (BPL1);INVOLVED IN RRNA PROCESSING 3 (IRP3)"]
["AT5G32450","tan","ACD11 binding partner, negatively regulates ROS-mediated defense response.","BPA1-LIKE 4 (BPL4)","BPA1-LIKE 4 (BPL4)"]
["AT3G49680","tan","Encodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.","BRANCHED-CHAIN AMINOTRANSFERASE 3 (BCAT3)","BRANCHED-CHAIN AMINOTRANSFERASE 3 (BCAT3); (ATBCAT-3)"]
["AT2G36390","tan","Encodes a starch branching enzyme (EC.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout plant tissues. The mRNA is cell-to-cell mobile.","STARCH BRANCHING ENZYME 2.1 (SBE2.1)","BRANCHING ENZYME 3 (BE3);STARCH BRANCHING ENZYME 2.1 (SBE2.1)"]
["AT4G39400","tan","Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. The structure of BRI1 ligand-binding domain has been determined at 2.5A resolution. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus. The mRNA is cell-to-cell mobile.","BRASSINOSTEROID INSENSITIVE 1 (BRI1)","BRASSINOSTEROID INSENSITIVE 1 (BRI1);CABBAGE 2 (CBB2);DWARF 2 (DWF2);BR INSENSITIVE 1 (BIN1); (ATBRI1)"]
["AT5G24630","tan","This gene is predicted to encode a protein that forms part of the topoisomerase VI complex. BIN4 is a nuclear-localized protein that can bind DNA. bin4 mutants are brassinolide-insensitive dwarves with severely reduced cell size in leaves, roots, and hypocotyls. Proper development of root hairs and trichomes is also disrupted in bin4 mutants and they have elevated levels of double strand breaks in their cotyledon cells.","BRASSINOSTEROID-INSENSITIVE4 (BIN4)","BRASSINOSTEROID-INSENSITIVE4 (BIN4)"]
["AT5G59010","tan","kinase with tetratricopeptide repeat domain-containing protein;(source:Araport11)","BRASSINOSTEROID-SIGNALING KINASE 5 (BSK5)","BRASSINOSTEROID-SIGNALING KINASE 5 (BSK5)"]
["AT3G54030","tan","kinase with tetratricopeptide repeat domain-containing protein;(source:Araport11)","BRASSINOSTEROID-SIGNALING KINASE 6 (BSK6)","BRASSINOSTEROID-SIGNALING KINASE 6 (BSK6)"]
["AT2G45400","tan","involved in the regulation of brassinosteroid metabolic pathway","BRI1-5 ENHANCED 1 (BEN1)","BRI1-5 ENHANCED 1 (BEN1)"]
["AT1G19350","tan","Encodes brassinosteroid (BR) signalling protein that accumulates in the nucleus as dephosphorylated form in response to BRs. Is phosphorylated by the BIN2 GSK3 kinase. It synergistically interacts with BIM1 to bind to E box sequences (CANNTG). The protein contains a nuclear localization signal (NLS), followed by a highly conserved amino-terminal domain (N) shared by all family members, a BIN2 phosphorylation domain (P), a PEST motif, involved in protein degradation in the absence of BR, and a carboxyl-terminal domain. BES1 can interact with the ELF6 and REF6 Jumonji N/C-domain containing proteins and may direct them to modify histone methylation upstream of some brassinosteroid responsive-genes. Works with BRAVO to regulate QC division in the root. AT1G19350.3(BES1-L) is the long isoform of BES1. It contains an additive N-terminal NLS compared with the canonical BES1-S. This recently evolved isoform is expressed specifically in the Arabidopsis lineage","BRI1-EMS-SUPPRESSOR 1 (BES1)","BRI1-EMS-SUPPRESSOR 1 (BES1);BRASSINAZOLE-RESISTANT 2 (BZR2); (BES1-L)"]
["AT1G75710","tan","Encodes a C2H2-like zinc finger transcription factor that regulates cell division and is modulated by BR-responsive kinases and transcription factors. Acts downstream of BR signaling to regulate cell division.","BRONTOSAURUS (BRON)","BRONTOSAURUS (BRON)"]
["AT2G40400","tan","Encodes a chloroplast localized protein of unknown function that is involved in regulation of chloroplast development.","BRZ-INSENSITIVE-PALE GREEN 3 (BPG3)","BRZ-INSENSITIVE-PALE GREEN 3 (BPG3);RETICULATA-RELATED 5 (RER5)"]
["AT3G18080","tan","B-S glucosidase 44;(source:Araport11)","B-S GLUCOSIDASE 44 (BGLU44)","B-S GLUCOSIDASE 44 (BGLU44)"]
["AT5G04480","tan","Encodes a protein with sequence similarity to glycosyltransferases that is localized to the golgi apparatus and is involved in pollen tube development.","BURSTING POLLEN (BUP)","BURSTING POLLEN (BUP)"]
["AT1G18740","tan","DUF793 domain containing protein. Expression is induced by cold. Loss of function mutations are more sensitive to freezing and have reduced levels of CBFs. May act by preventing degradation of CBFs.","BYPASS1-LIKE (B1L)","BYPASS1-LIKE (B1L)"]
["AT5G47100","tan","member of AtCBLs (Calcineurin B-like Calcium Sensor Proteins. CBL9 interacts with and targets CIPK23 to the plasma membrane in vivo.","CALCINEURIN B-LIKE PROTEIN 9 (CBL9)","CALCINEURIN B-LIKE PROTEIN 9 (CBL9); (ATCBL9)"]
["AT4G37640","tan","Encodes a calmodulin-regulated Ca(2+)-pump located in the endoplasmic reticulum. Belongs to plant 2B ATPase's with an N-terminal autoinhibitor.","CALCIUM ATPASE 2 (ACA2)","CALCIUM ATPASE 2 (ACA2)"]
["AT1G80910","tan","vacuolar fusion CCZ1-like protein (DUF1712);(source:Araport11)","CALCIUM CAFFEINE ZINC SENSITIVITY 1B (CCZ1B)","CALCIUM CAFFEINE ZINC SENSITIVITY 1B (CCZ1B)"]
["AT5G23060","tan","Encodes a chloroplast-localized protein that modulates cytoplasmic Ca2+ concentration and is crucial for proper stomatal regulation in response to elevations of external Ca2+. Phosphorylation of this protein is dependent on calcium.","CALCIUM SENSING RECEPTOR (CaS)","CALCIUM SENSING RECEPTOR (CaS)"]
["AT1G35670","tan","Encodes a Ca(2+)-dependent, calmodulin-independent protein kinase that is rapidly induced by drought and high-salt stress but not by low-temperature stress or heat stress. Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4.","CALCIUM-DEPENDENT PROTEIN KINASE 2 (CDPK2)","CALCIUM-DEPENDENT PROTEIN KINASE 2 (ATCDPK2); (CPK11); (ATCPK11);CALCIUM-DEPENDENT PROTEIN KINASE 2 (CDPK2)"]
["AT4G04720","tan","member of Calcium Dependent Protein Kinase","CALCIUM-DEPENDENT PROTEIN KINASE 21 (CPK21)","CALCIUM-DEPENDENT PROTEIN KINASE 21 (CPK21); (ATCPK21)"]
["AT4G09570","tan","Encodes a member of Calcium Dependent Protein Kinase (CDPK) gene family.Positive regulator of ABA signaling. Accumulates in root cells under osmotic stress. Turnover is regulated by PUB44 ubiquitin ligase. Phosphorylates ABA responsive transcription factors ABF1 and ABF4.","CALCIUM-DEPENDENT PROTEIN KINASE 4 (CPK4)","CALCIUM-DEPENDENT PROTEIN KINASE 4 (CPK4); (ATCPK4)"]
["AT1G05570","tan","Encodes a callose synthase 1 catalytic subunit . Member of Glycosyltransferase Family- 48.","CALLOSE SYNTHASE 1 (CALS1)","CALLOSE SYNTHASE 1 (CALS1); (GSL06); (ATGSL6); (ATGSL06);GLUCAN SYNTHASE-LIKE 6 (GSL6)"]
["AT2G41110","tan","Encodes a touch-inducible calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6. The mRNA is cell-to-cell mobile.","CALMODULIN 2 (CAM2)","CALMODULIN 2 (CAM2)"]
["AT3G56800","tan","encodes a calmodulin","CALMODULIN 3 (CAM3)","CALMODULIN 3 (CAM3);CALMODULIN 3 (acam-3)"]
["AT2G27030","tan","encodes a calmodulin that has higher affinity to kinesin-like calmodulin binding motor protein than CAM4 or CAM6. The mRNA is cell-to-cell mobile.","CALMODULIN 5 (CAM5)","CALMODULIN 5 (CAM5)"]
["AT4G35310","tan","calmodulin-domain protein kinase CDPK isoform 5 (CPK5)","CALMODULIN-DOMAIN PROTEIN KINASE 5 (CPK5)","CALMODULIN-DOMAIN PROTEIN KINASE 5 (CPK5); (ATCPK5)"]
["AT1G09210","tan","Encodes one of three Arabidopsis calreticulins.Post-transcriptionally regulates together with CRT1 VAMP721/722 levels under ER stress.","CALRETICULIN 1B (CRT1b)","CALRETICULIN 1B (CRT1b);CALRETICULIN 2 (CRT2); (AtCRT1b)"]
["AT2G46410","tan","Nuclear-localized R3-type MYB transcription factor. Positive regulator of hair-cell differentiation. Preferentially transcribed in hairless cells. Moves from atrichoblasts into trichoblast via plasmodesmata in a tissue-specific mode. N-terminus and part of the Myb domain are required for this movement, with W76 playing a crucial role. Capability to increase the size-exclusion limit of plasmodesmata. Regulated by WEREWOLF.","CAPRICE (CPC)","CAPRICE (CPC)"]
["AT1G06820","tan","Encodes carotenoid isomerase. Catalyzes the isomerization of poly-cis-carotenoids to all-trans-carotenoids. Together with PDS and ZDS, CRTiso is required to complete the synthesis of lycopene from phytoene.","CAROTENOID ISOMERASE (CRTISO)","CAROTENOID ISOMERASE (CRTISO);CAROTENOID AND CHLOROPLAST REGULATION 2 (CCR2)"]
["AT4G26100","tan","Encodes a member of the casein kinase 1 protein family that is expressed in punctate particles at the cell periphery suggesting possible plasmodesmatal localization (member of CKL-B group).","CASEIN KINASE 1 (CK1)","CASEIN KINASE 1 (CK1); (CKL1)"]
["AT4G17640","tan","Encodes casein kinase II beta (regulatory) subunit.","CASEIN KINASE II BETA CHAIN 2 (CKB2)","CASEIN KINASE II BETA CHAIN 2 (CKB2)"]
["AT1G17200","tan","Uncharacterized protein family (UPF0497);(source:Araport11)","CASP-LIKE PROTEIN 2A1 (CASPL2A1)","CASP-LIKE PROTEIN 2A1 (CASPL2A1)"]
["AT3G16300","tan","Uncharacterized protein family (UPF0497);(source:Araport11)","CASP-LIKE PROTEIN 3A1 (CASPL3A1)","CASP-LIKE PROTEIN 3A1 (CASPL3A1)"]
["AT3G53850","tan","Uncharacterized protein family (UPF0497);(source:Araport11)","CASP-LIKE PROTEIN 5B2 (CASPL5B2)","CASP-LIKE PROTEIN 5B2 (CASPL5B2)"]
["AT1G31500","tan","HESP identified based on similarity to nocturnins and presence circadian regulatory elements in the promoter. It functions as a Mg(II) dependent poly(A) exoribonuclease.It is under circadian regulation and expressed at night. Knockdowns affect the regulation of circadian genes CCA1 and TOC1.","CATABOLITE REPRESSOR 4D (CCR4D)","CATABOLITE REPRESSOR 4D (CCR4D)"]
["AT1G08960","tan","Encodes a member of the Potassium-dependent sodium-calcium exchanger like-family that localizes to the plasma membrane and nuclear periphery, and has a role in mediating high-af&#64257;nity K+ uptake and Na+ transport in yeast.","CATION EXCHANGER 11 (CAX11)","CATION EXCHANGER 11 (ATCAX11);CATION EXCHANGER 11 (CAX11);CATION CALCIUM EXCHANGER 5 (CCX5);ARABIDOPSIS THALIANA CATION CALCIUM EXCHANGER 5 (AtCXX5)"]
["AT1G17120","tan","Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Does not mediate efficient uptake of basic amino acids in yeast or Xenopus systems but can transport neutral and acidic amino acid analogs.","CATIONIC AMINO ACID TRANSPORTER 8 (CAT8)","CATIONIC AMINO ACID TRANSPORTER 8 (CAT8)"]
["AT1G01140","tan","Encodes a CBL-interacting protein kinase with similarity to SOS2","CBL-INTERACTING PROTEIN KINASE 9 (CIPK9)","CBL-INTERACTING PROTEIN KINASE 9 (CIPK9);PROTEIN KINASE 6 (PKS6)"]
["AT3G26740","tan","transcripts are differentially regulated at the level of mRNA stability at different times of day controlled by the circadian clock. mRNAs are targets of the mRNA degradation pathway mediated by the downstream (DST) instability determinant.","CCR-LIKE (CCL)","CCR-LIKE (CCL)"]
["AT5G13840","tan","FIZZY-related 3;(source:Araport11)","FIZZY-RELATED 3 (FZR3)","CELL CYCLE SWITCH PROTEIN 52 B (CCS52B);FIZZY-RELATED 3 (FZR3)"]
["AT5G22740","tan","Encodes a beta-mannan synthase based on in vitro enzyme assays from heterologously expressed protein. CSLA2 synthesizes the backbone of galactoglucomannan in seed coat epidermal cells. Both CSLA2 and MUCI10, which may be part of a protein complex, are critical for mucilage architecture.","CELLULOSE SYNTHASE-LIKE A02 (CSLA02)","CELLULOSE SYNTHASE-LIKE A02 (CSLA02);ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE A2 (ATCSLA2); (ATCSLA2);CELLULOSE SYNTHASE-LIKE A 2 (CSLA2);ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE A02 (ATCSLA02)"]
["AT5G16910","tan","encodes a gene similar to cellulose synthase. Located in Golgi membranes. The mRNA is cell-to-cell mobile.","CELLULOSE-SYNTHASE LIKE D2 (CSLD2)","CELLULOSE-SYNTHASE LIKE D2 (CSLD2); (ATCSLD2)"]
["AT3G22780","tan","CHC protein involved in cell cycle progression (positive regulator).","CHINESE FOR 'UGLY' (TSO1)","CHINESE FOR 'UGLY' (TSO1); (ATTSO1)"]
["AT3G14870","tan","hypothetical protein (DUF641);(source:Araport11)","CHIQUITA1-LIKE 4 (CHIQL4)","CHIQUITA1-LIKE 4 (CHIQL4)"]
["AT1G55620","tan","Encodes a chloride channel protein that has been localized to the chloroplast and golgi apparatus. Complements yeast gef1 mutant and therefor may function to acidify the golgi lumen.","CHLORIDE CHANNEL F (CLC-F)","CHLORIDE CHANNEL F (CLC-F); (ATCLC-F)"]
["AT1G29930","tan","Subunit of light-harvesting complex II (LHCII),which absorbs light and transfers energy to the photosynthetic reaction center. The mRNA is cell-to-cell mobile.","CHLOROPHYLL A/B BINDING PROTEIN 1 (CAB1)","CHLOROPHYLL A/B BINDING PROTEIN 1 (CAB1); (AB140);CHLOROPHYLL A/B PROTEIN 140 (CAB140);LIGHT-HARVESTING CHLOROPHYLL A/B-PROTEIN 1.3 (LHCB1.3);CELLULOSE SYNTHASE LIKE C8 (CLSC8)"]
["AT1G29910","tan","member of Chlorophyll a/b-binding protein family","CHLOROPHYLL A/B BINDING PROTEIN 3 (CAB3)","CHLOROPHYLL A/B BINDING PROTEIN 3 (CAB3); (AB180);LIGHT HARVESTING CHLOROPHYLL A/B BINDING PROTEIN 1.2 (LHCB1.2);CELLULOSE SYNTHASE LIKE B3 (CSLB3)"]
["AT1G29920","tan","Encodes lhcb1.1 a component of the LHCIIb light harvesting complex associated with photosystem II.","CHLOROPHYLL A/B-BINDING PROTEIN 2 (CAB2)","CHLOROPHYLL A/B-BINDING PROTEIN 2 (CAB2); (AB165);LIGHT HARVESTING CHLOROPHYLL A/B-BINDING PROTEIN 1.1 (LHCB1.1)"]
["AT5G38520","tan","CLD1 is involved in steady-state chlorophyll turnover; CLD1 dephytylates chlorophyll a, chlorophyll b, and pheophytin a in vitro; CLD1 and CHLG form a salvage cycle in recycling chlorophyll. Suppression of CLD1 expression results in reduced tolerance to moderately high temperature.","CHLOROPHYLL DEPHYTYLASE1 (CLD1)","CHLOROPHYLL DEPHYTYLASE1 (CLD1)"]
["AT1G19670","tan","Chlorophyllase is the first enzyme involved in chlorophyll degradation. It catalyzes the hydrolysis of the ester bond to yield chlorophyllide and phytol. AtCLH1 lacks a typical signal sequence for the chloroplast. Its expression is induced rapidly by methyljasmonate, a known promoter of senescence and chlorophyll degradation.","CHLOROPHYLLASE 1 (CLH1)","CHLOROPHYLLASE 1 (CLH1);CORONATINE-INDUCED PROTEIN 1 (ATHCOR1);CORONATINE-INDUCED PROTEIN 1 (CORI1);CHLOROPHYLLASE 1 (ATCLH1)"]
["AT4G34350","tan","Arabidopsis ISPH is involved in the plastid nonmevalonate pathway of isoprenoid biosynthesis. It was shown to complement the lethal phenotype of E. coli ispH mutant and is therefore most likely encodes a protein with 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity involved in the last step of mevalonate-independent isopentenyl biosynthesis. Mutant has Albino seedling.","4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE (HDR)","CHLOROPLAST BIOGENESIS 6 (CLB6); (ISPH);4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE (HDR)"]
["AT2G47390","tan","Chloroplast stroma localized glutamyl peptidase.","CHLOROPLAST GLUTAMYL PEPTIDASE (CGEP)","CHLOROPLAST GLUTAMYL PEPTIDASE (CGEP)"]
["AT1G60000","tan","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)","CHLOROPLAST RNA BINDING PROTEIN 28A (CP28A)","CHLOROPLAST RNA BINDING PROTEIN 28A (CP28A)"]
["AT3G25690","tan","Actin binding protein required for normal chloroplast positioning. The mRNA is cell-to-cell mobile.","CHLOROPLAST UNUSUAL POSITIONING 1 (CHUP1)","CHLOROPLAST UNUSUAL POSITIONING 1 (CHUP1)"]
["AT5G16390","tan","Encodes for the biotin carboxyl-carrier subunit of the multi-enzyme plastidial acetyl-coenzyme A carboxylase complex.","CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1 (CAC1)","CHLOROPLASTIC ACETYLCOENZYME A CARBOXYLASE 1 (CAC1); (CAC1A);BIOTIN CARBOXYL-CARRIER PROTEIN 1 (BCCP-1);BIOTIN CARBOXYL-CARRIER PROTEIN 1 (BCCP1); (CAC1-A);BIOTIN CARBOXYL CARRIER PROTEIN (BCCP)"]
["AT3G47860","tan","Encodes a chloroplastic lipocalin AtCHL. Located in thylakoid lumen. Involved in the protection of thylakoidal membrane lipids against reactive oxygen species, especially singlet oxygen, produced upon excess light. LCNP is required for sustained photoprotective energy dissipation or NPQ (qH) to occur (PMID:29233855).","CHLOROPLASTIC LIPOCALIN (CHL)","CHLOROPLASTIC LIPOCALIN (CHL);LIPOCALIN IN THE PLASTID (LCNP)"]
["AT3G15380","tan","Encodes a member of a choline transporter-like protein family that facilitates choline transport, localizes to the trans-Golgi network, and during cytokinesis is associated with the phragmoplast. Loss-of-function results in an altered choline metabolite profile, defects in sieve plate and sieve pore formation and impaired phloem transport.","CHOLINE TRANSPORTER-LIKE 1 (CHER1)","CHOLINE TRANSPORTER-LIKE 1 (CHER1);CHOLINE TRANSPORTER-LIKE 1 (ATCTL1);CHOLINE TRANSPORTER-LIKE 1 (CTL1)"]
["AT5G18620","tan","Encodes a member of the A. thaliana imitation switch (AtISWI) subfamily of chromatin remodeling factors. Double mutation in CHR17 and CHR11 results in the loss of the evenly spaced nucleosome pattern in gene bodies, but does not affect nucleosome density.","CHROMATIN REMODELING FACTOR17 (CHR17)","CHROMATIN REMODELING FACTOR17 (CHR17)"]
["AT2G20760","tan","Clathrin light chain protein;(source:Araport11)","CLATHRIN LIGHT 62 CHAIN1 (CLC1)","CLATHRIN LIGHT 62 CHAIN1 (CLC1)"]
["AT3G24770","tan","Belongs to a large gene family, called CLE for CLAVATA3/ESR-related, encoding small peptides with conserved carboxyl termini. The C-terminal 12 amino acid sequence of CLE41 is identical to that of a dodeca peptide (TDIF, tracheary element differentiation inhibitory factor) isolated from Arabidopsis and functions as a suppressor of plant stem cell differentiation. TDIF sequence is also identical to the C-terminal 12 amino acids of CLE44 (At4g13195). The protein is expressed in the vascular system and is involved in axillary bud formation. The mRNA is cell-to-cell mobile.","CLAVATA3/ESR-RELATED 41 (CLE41)","CLAVATA3/ESR-RELATED 41 (CLE41)"]
["AT2G20190","tan","Encodes a microtubule-associated protein that is involved in both cell division and cell expansion. It likely promotes microtubule stability.","CLIP-ASSOCIATED PROTEIN (CLASP)","CLIP-ASSOCIATED PROTEIN (CLASP);CLIP-ASSOCIATED PROTEIN (ATCLASP)"]
["AT1G66670","tan","One of several nuclear-encoded ClpPs (caseinolytic protease). Contains a highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001).","CLP PROTEASE PROTEOLYTIC SUBUNIT 3 (CLPP3)","CLP PROTEASE PROTEOLYTIC SUBUNIT 3 (CLPP3); (NCLPP3)"]
["AT5G17920","tan","Encodes a cytosolic cobalamin-independent methionine synthase, involved in methionine regeneration via the activated methyl cycle (SAM cycle). The protein undergoes thiolation following treatment with the oxidant tert-butylhydroperoxide. The mRNA is cell-to-cell mobile.","METHIONINE SYNTHESIS 1 (ATMS1)","COBALAMIN-INDEPENDENT METHIONINE SYNTHASE (ATCIMS);5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE HOMOCYSTEINE METHYLTRANSFERASE 1 (METS1);METHIONINE SYNTHESIS 1 (ATMS1); (ATMETS)"]
["AT3G02210","tan","COBRA-like protein 1 precursor;(source:Araport11)","COBRA-LIKE PROTEIN 1 PRECURSOR (COBL1)","COBRA-LIKE PROTEIN 1 PRECURSOR (COBL1)"]
["AT1G29390","tan","Integral membrane protein in the inner envelope of chloroplasts. Provide freezing tolerance.","COLD REGULATED 314 THYLAKOID MEMBRANE 2 (COR314-TM2)","COLD REGULATED 314 THYLAKOID MEMBRANE 2 (COR314-TM2);COLD REGULATED 314 INNER MEMBRANE 2 (COR413IM2)"]
["AT1G20440","tan","Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. Cold regulated gene, amino acid sequence homology with Group II LEA (late embryogenesis abundant) proteins. Also responds to osmotic stress, ABA, dehydration and inhibits e.coli growth while overexpressed. COR47 and RAB18 double overexpressor plants are cold tolerant. Regulated by heat shock.","COLD-REGULATED 47 (COR47)","COLD-REGULATED 47 (COR47); (RD17); (AtCOR47)"]
["AT5G13630","tan","Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.","GENOMES UNCOUPLED 5 (GUN5)","CONDITIONAL CHLORINA (CCH);H SUBUNIT OF MG-CHELATASE (CHLH);GENOMES UNCOUPLED 5 (GUN5);ABA-BINDING PROTEIN (ABAR); (CCH1)"]
["AT4G01395","tan","conserved oligomeric Golgi complex subunit 4;(source:Araport11)","CONSERVED OLIGOMERIC GOLGI COMPLEX 4 (COG4)","CONSERVED OLIGOMERIC GOLGI COMPLEX 4 (COG4)"]
["AT1G67930","tan","Golgi transport complex protein-like protein;(source:Araport11)","CONSERVED OLIGOMERIC GOLGI COMPLEX 5 (COG5)","CONSERVED OLIGOMERIC GOLGI COMPLEX 5 (COG5)"]
["AT1G31780","tan","Encodes a component of the oligomeric Golgi (COG) complex. Found in pollen golgi apparatus. Loss of function results in defects in pollen tube growth resulting in lack of transmission through the pollen.","CONSERVED OLIGOMERIC GOLGI COMPLEX 6 (COG6)","CONSERVED OLIGOMERIC GOLGI COMPLEX 7 (COG7);CONSERVED OLIGOMERIC GOLGI COMPLEX 6 (COG6)"]
["AT5G51430","tan","Encodes a protein that is homologous to Cog7, a subunit of the conserved oligomeric Golgi (COG) complex, which is required for the normal morphology and function of the Golgi apparatus. It is likely to be involved in transport or retention of Golgi-localized proteins and in maintenance of Golgi morphology.","EMBRYO YELLOW (EYE)","CONSERVED OLIGOMERIC GOLGI COMPLEX 7 (COG7);EMBRYO YELLOW (EYE)"]
["AT5G11980","tan","COG8 is a component of a putative conserved oligomeric Golgi (COG) complex that is thought to be involved in tethering of retrograde intra Golgi vesicles. It is required for proper deposition of cell wall materials in pollen tube growth. In mutant pollen,golgi appear abnormal.When homozygotes can be produced (by complementing the defect in pollen), the plants are embryo lethal suggesting an essential function. COG8 interacts with several other putative COG components.","CONSERVED OLIGOMERIC GOLGI COMPLEX 8 (COG8)","CONSERVED OLIGOMERIC GOLGI COMPLEX 8 (COG8)"]
["AT2G31040","tan","Encodes an integral thylakoid protein that facilitates assembly of the membranous part of the chloroplast ATPase.The N-terminal domain of CGL160 interacts in yeast-two hybrid experiments with subunit beta of the thylakoid ATP synthase (PMID:36250886).","CONSERVED ONLY IN THE GREEN LINEAGE 160 (CGL160)","CONSERVED ONLY IN THE GREEN LINEAGE 160 (CGL160); (ATCGL160)"]
["AT5G03190","tan","Conserved peptide uORF; regulates translation of any downstream ORF in response to environmental signals heat stress and water limitation.","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 47 (CPuORF47)","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 47 (CPuORF47)"]
["AT1G29690","tan","Encodes a protein containing a domain with significant homology to the MACPF (membrane attack complex and perforin) domain of complements and perforin proteins that are involved in innate immunity in animals. Transgenic <i>cad1-1</i> mutant plants show lesions seen in the hypersensitive response, as well as a spontaneous activation of expression of pathogenesis-related genes and leading to a 32-fold increase in salicylic acid (SA). CAD1 is postulated to act as a negative regulator controlling SA-mediated pathway of programmed cell death in plant immunity.","CONSTITUTIVELY ACTIVATED CELL DEATH 1 (CAD1)","CONSTITUTIVE ACTIVE DEFENSE 1 (CAD1);CONSTITUTIVELY ACTIVATED CELL DEATH 1 (CAD1);NECROTIC SPOTTED LESION 2 (NSL2)"]
["AT5G05690","tan","Encodes a member of the CP90A family, a cytochrome P450 monooxygenase which converts 6-deoxocathasterone to 6-deoxoteasterone in the late C6 oxidation pathway and cathasterone to teasterone in the early C6 oxidation pathway of brassinolide biosynthesis. Expressed in cotyledons and leaves. Mutants display de-etiolation and derepression of light-induced genes in the dark, dwarfism, male sterility and activation of stress-regulated genes in the light. The expression of the gene using a CPD promoter:LUC fusion construct was shown to be under circadian and light control. Additionally, the circadian regulation was shown to be independent of BR levels as it remains unchanged in <i>bri1</i> mutant lines. CPD appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through a BRI1-mediated signaling pathway that affects FLC expression levels, as uncovered by double mutant analyses.","CONSTITUTIVE PHOTOMORPHOGENIC DWARF (CPD)","CONSTITUTIVE PHOTOMORPHOGENIC DWARF (CPD); (CYP90A);CYTOCHROME P450 90A1 (CYP90A1);CABBAGE 3 (CBB3);DWARF 3 (DWF3); (CYP90)"]
["AT3G56940","tan","Encodes a putative ZIP protein with varying mRNA accumulation in leaves, stems and roots. Has a consensus carboxylate-bridged di-iron binding site. The mRNA is cell-to-cell mobile.","COPPER RESPONSE DEFECT 1 (CRD1)","COPPER RESPONSE DEFECT 1 (CRD1); (CHL27); (ACSF)"]
["AT1G08830","tan","Encodes a cytosolic copper/zinc superoxide dismutase CSD1 that can detoxify superoxide radicals. Its expression is affected by miR398-directed mRNA cleavage. Regulated by biotic and abiotic stress. Activation of CSD1 in the cytoplasm involves both a CCS-dependent and -independent pathway.","COPPER/ZINC SUPEROXIDE DISMUTASE 1 (CSD1)","COPPER/ZINC SUPEROXIDE DISMUTASE 1 (CSD1);SUPEROXIDE DISMUTASE 1 (SOD1);SUPEROXIDE DISMUTASE 1 (ATSOD1)"]
["AT4G23600","tan","Encodes cystine lyase which is expected to be involved in amino acid metabolism, providing the plant with cysteine and the generation of precursors of ethylene biosynthesis. mRNA levels are elevated in response to wounding.","CORONATINE INDUCED 1 (CORI3)","CORONATINE INDUCED 1 (CORI3);JASMONIC ACID RESPONSIVE 2 (JR2)"]
["AT1G53650","tan","RNA-binding protein, putative, similar to RNA-binding protein GB:AAA86641 GI:1174153 from (Arabidopsis thaliana).Contains PAB2 domain which facilitates binding to PABC proteins.","CTC-INTERACTING DOMAIN 8 (CID8)","CTC-INTERACTING DOMAIN 8 (CID8)"]
["AT1G30820","tan","Cytidine triphosphate synthase.","CTP SYNTHASE 1 (CTPS1)","CTP SYNTHASE 1 (CTPS1)"]
["AT4G02120","tan","Cytidine triphosphate synthase.","CTP SYNTHASE 3 (CTPS3)","CTP SYNTHASE 3 (CTPS3)"]
["AT4G28790","tan","Encodes Cu-deficiency induced transcription factor 2, an uncharacterized bHLH protein, that is a target of the copper deficiency response transcriptional regulator SPL7. It is transcriptionally upregulated under copper deficiency by SPL7.","CU-DEFICIENCY INDUCED TRANSCRIPTION FACTOR 2 (CITF2)","CU-DEFICIENCY INDUCED TRANSCRIPTION FACTOR 2 (CITF2); (BHLH23)"]
["AT2G23380","tan","Similar to the product of the Polycomb-group gene Enhancer of zeste. Catalytic component of the PRC2 complex.Required for stable repression of AG and AP3. Putative role in cell fate determination. Involved in the control of leaf morphogenesis. mutants exhibit curled, involute leaves. AGAMOUS and APETALA3 are ectopically expressed in the mutant.","CURLY LEAF (CLF)","CURLY LEAF (CLF);INCURVATA 1 (ICU1);SETDOMAIN GROUP 1 (SDG1);SETDOMAIN 1 (SET1)"]
["AT4G01150","tan","Integral thylakoid membrane protein required for proper grana stack curvature.","CURVATURE THYLAKOID 1A (CURT1A)","CURVATURE THYLAKOID 1A (CURT1A)"]
["AT1G52220","tan","Thylakoid membrane localized protein that interacts with other CURT family proteins. Oligomerization is associated with grana thylakoid curavature.","CURVATURE THYLAKOID 1C (CURT1C)","CURVATURE THYLAKOID 1C (CURT1C)"]
["AT2G46450","tan","Member of Cyclic nucleotide gated channel family.Positive regulator of resistance against avirulent fungal pathogen.Suppresses the phenotype conferred by cpr22 in a dosage-dependent manner.","CYCLIC NUCLEOTIDE-GATED CHANNEL 12 (CNGC12)","CYCLIC NUCLEOTIDE-GATED CHANNEL 12 (ATCNGC12);CYCLIC NUCLEOTIDE-GATED CHANNEL 12 (CNGC12)"]
["AT1G15570","tan","A2-type cyclin. Negatively regulates endocycles and acts as a key regulator of ploidy levels in Arabidopsis endoreduplication. Interacts physically with CDKA;1. Expressed preferentially in trichomes and young developing tissues.","CYCLIN A2;3 (CYCA2;3)","CYCLIN A2;3 (CYCA2;3)"]
["AT1G70210","tan","Encodes a D-type cyclin that physically interacts with CDC2A. Its expression is upregulated early during germination.","CYCLIN D1;1 (CYCD1;1)","CYCLIN D1;1 (CYCD1;1); (ATCYCD1;1)"]
["AT4G34160","tan","encodes a cyclin D-type protein involved in the switch from cell proliferation to the final stages of differentiation. The gene is transcriptionally regulated by cytokinin and brassinosteroid. Protein interacts with cyclin-dependent kinase inhibitor ICK1.","CYCLIN D3;1 (CYCD3;1)","CYCLIN D3;1 (CYCD3;1); (CYCD3)"]
["AT3G50070","tan","Encode CYCD3;3, a CYCD3 D-type cyclin. Important for determining cell number in developing lateral organs. Mediating cytokinin effects in apical growth and development.","CYCLIN D3;3 (CYCD3;3)","CYCLIN D3;3 (CYCD3;3)"]
["AT5G65420","tan","Encodes a D-type cyclin CYCD4;1 that physically interacts with CDC2A and is expressed during vascular tissue development, embryogenesis, and formation of lateral root primordia. Its expression is upregulated early during germination.Involved in stomatal cell lineage proliferation in the hypocotyl.","CYCLIN D4;1 (CYCD4;1)","CYCLIN D4;1 (CYCD4;1)"]
["AT2G07050","tan","Involved in the biosynthesis of brassinosteroids. Catalyzes the reaction from epoxysqualene to cycloartenol.","CYCLOARTENOL SYNTHASE 1 (CAS1)","CYCLOARTENOL SYNTHASE 1 (CAS1)"]
["AT3G15520","tan","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11). Localized to thylakoid lumen. Induced by high light.","CYCLOPHILIN 37 (CYP37)","CYCLOPHILIN 37 (CYP37)"]
["AT2G47320","tan","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11)","CYCLOPHYLIN 21-3 (CYP21-3)","CYCLOPHYLIN 21-3 (CYP21-3)"]
["AT5G50375","tan","Converts pentacyclic cyclopropyl sterols to conventional tetracyclic sterols. CPI1 function during and just after division and support gravitropism by establishing polar PIN2 localization. Required for endocytosis of PIN2","CYCLOPROPYL ISOMERASE (CPI1)","CYCLOPROPYL ISOMERASE (CPI1)"]
["AT4G34120","tan","Encodes a single cystathionine beta-Synthase domain-containing protein. Modulates development by regulating the thioredoxin system. The mRNA is cell-to-cell mobile.","LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 1 (LEJ1)","CYSTATHIONE [BETA]-SYNTHASE DOMAIN-CONTAINING PROTEIN 1 (CDCP1);LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 1 (LEJ1);CBS DOMAIN CONTAINING PROTEIN 2 (CBSX2)"]
["AT5G12140","tan","Encodes a cystatin.","CYSTATIN-1 (CYS1)","CYSTATIN-1 (CYS1);CYSTATIN-1 (ATCYS1)"]
["AT3G61440","tan","Encodes a cysteine synthase isomer CysC1. The isomer is however less effective in cysteine biosynthesis. It is involved in beta-cyanoalanine biosynthesis, an intermediate of cyanide detoxification pathway. The mRNA is cell-to-cell mobile.","CYSTEINE SYNTHASE C1 (CYSC1)","CYSTEINE SYNTHASE C1 (ATCYSC1);BETA-SUBSTITUTED ALA SYNTHASE 3;1 (ARATH;BSAS3;1);CYSTEINE SYNTHASE C1 (CYSC1);?-CYANOALANINE SYNTHASE C1 (CAS-C1)"]
["AT5G28020","tan","Encodes cysteine synthase CysD2.","CYSTEINE SYNTHASE D2 (CYSD2)","CYSTEINE SYNTHASE D2 (CYSD2);CYSTEINE SYNTHASE D2 (ATCYSD2)"]
["AT5G04080","tan","cysteine-rich TM module stress tolerance protein;(source:Araport11)","CYSTEINE-RICH TRANSMEMBRANE MODULE 12 (ATHCYSTM12)","CYSTEINE-RICH TRANSMEMBRANE MODULE 12 (ATHCYSTM12)"]
["AT1G22840","tan","Encodes cytochrome c. Contains two site II (TGGGCC/T) elements, which interact with a TCP-domain transcription factor, and a downstream internal telomeric repeat, and are required for expression of the Cytc-1 gene. Promoter directs preferential expression in root and shoot meristems and in anthers. Double mutants with CYTC-2 accumulate starch during the day, have delayed growth and development and reduced GA and DELLA proteins linking cellular metabolism and GA homeostasis.","CYTOCHROME C-1 (CYTC-1)","CYTOCHROME C-1 (CYTC-1);CYTOCHROME C-A (ATCYTC-A)"]
["AT1G11680","tan","putative obtusifoliol 14-alpha demethylase involved in sterol biosynthesis. The mRNA is cell-to-cell mobile.","CYTOCHROME P450 51G1 (CYP51G1)","CYTOCHROME P450 51 (ATCYP51);CYTOCHROME P450 51 (CYP51);CYTOCHROME P450 51G1 (CYP51G1);EMBRYO DEFECTIVE 1738 (EMB1738);CYTOCHROME P450 51A2 (CYP51A2)"]
["AT3G20080","tan","cytochrome P450, family 705, subfamily A, polypeptide 15;(source:Araport11)","CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 15 (CYP705A15)","CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 15 (CYP705A15)"]
["AT3G20100","tan","member of CYP705A The mRNA is cell-to-cell mobile.","CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 19 (CYP705A19)","CYTOCHROME P450, FAMILY 705, SUBFAMILY A, POLYPEPTIDE 19 (CYP705A19)"]
["AT4G19230","tan","Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. CYP707A1 appears to play an important role in determining the ABA levels in dry seeds. Gene involved in postgermination growth. Overexpression of CYP707A1 leads to a decrease in ABA levels and a reduction in after-ripening period to break dormancy.","CYTOCHROME P450, FAMILY 707, SUBFAMILY A, POLYPEPTIDE 1 (CYP707A1)","CYTOCHROME P450, FAMILY 707, SUBFAMILY A, POLYPEPTIDE 1 (CYP707A1)"]
["AT3G26300","tan","putative cytochrome P450","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 34 (CYP71B34)","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 34 (CYP71B34)"]
["AT3G14650","tan","putative cytochrome P450 The mRNA is cell-to-cell mobile.","CYTOCHROME P450, FAMILY 72, SUBFAMILY A, POLYPEPTIDE 11 (CYP72A11)","CYTOCHROME P450, FAMILY 72, SUBFAMILY A, POLYPEPTIDE 11 (CYP72A11)"]
["AT1G13710","tan","Encodes the cytochrome P450 CYP78A5 monooxygenase. Contributes to the generation of a growth-stimulating signal distinct from the classical phytohormones that prevents proliferation arrest, promoting organ growth. In ovules it is required for megagametogenesis, maternal control of seed size and restricting megaspore mother cell fate to a single cell.","CYTOCHROME P450, FAMILY 78, SUBFAMILY A, POLYPEPTIDE 5 (CYP78A5)","CYTOCHROME P450, FAMILY 78, SUBFAMILY A, POLYPEPTIDE 5 (CYP78A5);KLUH (KLU)"]
["AT1G31800","tan","Encodes a protein with &#946;-ring carotenoid hydroxylase activity. The mRNA is cell-to-cell mobile.","CYTOCHROME P450, FAMILY 97, SUBFAMILY A, POLYPEPTIDE 3 (CYP97A3)","CYTOCHROME P450, FAMILY 97, SUBFAMILY A, POLYPEPTIDE 3 (CYP97A3);LUTEIN DEFICIENT 5 (LUT5)"]
["AT2G39770","tan","Encodes a GDP-mannose pyrophosphorylase/ mannose-1-pyrophosphatase. This enzyme provides GDP-mannose, which is used for cell wall carbohydrate biosynthesis and protein glycosylation as well as for ascorbate (vitamin C) biosynthesis. Mutations in this gene confer hypersensitivity to NH4+.","CYTOKINESIS DEFECTIVE 1 (CYT1)","CYTOKINESIS DEFECTIVE 1 (CYT1);VITAMIN C DEFECTIVE 1 (VTC1);SENSITIVE TO OZONE 1 (SOZ1);EMBRYO DEFECTIVE 101 (EMB101);GDP-MANNOSE PYROPHOSPHORYLASE 1 (GMP1)"]
["AT2G40730","tan","kinase family with ARM repeat domain-containing protein;(source:Araport11)","CYTOPLASMIC TRNA EXPORT PROTEIN (CTEXP)","CYTOPLASMIC TRNA EXPORT PROTEIN (CTEXP)"]
["AT1G06700","tan","Plays role in abscisic acid (ABA)-dependent pathway in response to dehydration; forms homo- or heterodimers in a kinase active dependent manner.","CYTOSOLIC ABA RECEPTOR KINASE 7 (CARK7)","CYTOSOLIC ABA RECEPTOR KINASE 7 (CARK7)"]
["AT1G35580","tan","CINV1 / A/N-InvG is an alkaline/neutral invertase that breaks sucrose down into fructose and glucose (GH100). The exact localization of CINV1 remains under investigation but there is evidence that fluorescently-tagged CINV1 localizes to the cytoplasm. atinvg mutants have reduced root growth, reduced invertase activity, and increased expression of antioxidant genes under basal conditions. The levels of CINV1 / A/N-InvG transcripts rise in response to a hydrogen peroxide treatment. The protein has been shown to interact with PIP5K9.","CYTOSOLIC INVERTASE 1 (CINV1)","CYTOSOLIC INVERTASE 1 (CINV1);ALKALINE/NEUTRAL INVERTASE G (A/N-InvG);NEUTRAL INVERTASE 2 (NIN2)"]
["AT4G09510","tan","CINV2 appears to function as a neutral invertase based on the phenotype of a cinv1(AT1G35580)/cinv2 double mutant. It is predicted to be a cytosolic enzyme. CINV1, CINV2, and possibly other cytosolic invertases may play an important role in supplying carbon from sucrose to non-photosynthetic tissues.","CYTOSOLIC INVERTASE 2 (CINV2)","CYTOSOLIC INVERTASE 2 (CINV2);ALKALINE/NEUTRAL INVERTASE I (A/N-InvI)"]
["AT1G65930","tan","Encodes a NADP+-isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses. The mRNA is cell-to-cell mobile.","CYTOSOLIC NADP+-DEPENDENT ISOCITRATE DEHYDROGENASE (cICDH)","CYTOSOLIC NADP+-DEPENDENT ISOCITRATE DEHYDROGENASE (cICDH)"]
["AT3G55440","tan","Encodes triosephosphate isomerase.","TRIOSEPHOSPHATE ISOMERASE (TPI)","CYTOSOLIC TRIOSE PHOSPHATE ISOMERASE (ATCTIMC);TRIOSEPHOSPHATE ISOMERASE (TPI);CYTOSOLIC ISOFORM TRIOSE PHOSPHATE ISOMERASE (CYTOTPI)"]
["AT5G43330","tan","predicted to encode a cytosolic malate dehydrogenase. The mRNA is cell-to-cell mobile.","CYTOSOLIC-NAD-DEPENDENT MALATE DEHYDROGENASE 2 (c-NAD-MDH2)","CYTOSOLIC-NAD-DEPENDENT MALATE DEHYDROGENASE 2 (c-NAD-MDH2)"]
["AT5G57850","tan","ADCL encodes a protein that acts as a 4-amino-4-deoxychorismate lyase. It catalyzes the production 4-aminobenzoate (pABA) production which is required for folate biosynthesis. The enzyme localizes to chloroplasts based on an import assay and GFP localization experiments. Involved in D-Amino Acid Stimulated Ethylene Production.","4-AMINO-4-DEOXYCHORISMATE LYASE (ADCL)","D-AA SPECIFIC TRANSAMINASE D-AAT (DAT1);4-AMINO-4-DEOXYCHORISMATE LYASE (ADCL)"]
["AT3G13450","tan","branched chain alpha-keto acid dehydrogenase E1 beta","DARK INDUCIBLE 4 (DIN4)","DARK INDUCIBLE 4 (DIN4); (E1B2)"]
["AT3G12620","tan","Protein phosphatase 2C family protein;(source:Araport11)","D-CLADE TYPE 2C PROTEIN PHOSPHATASE 3 (PP2C.D3)","D-CLADE TYPE 2C PROTEIN PHOSPHATASE 3 (PP2C.D3)"]
["AT1G48420","tan","Encodes an enzyme that decomposes D-cysteine into pyruvate, H2S, and NH3. Only D-cysteine but not L-cysteine was converted by D-CDes to pyruvate, H2S, and NH3. There is conflicting evidence on its 1-aminocyclopropane-1-carboxylate deaminase activity. Involved in regulating ethylene levels. DCD enhances plant cadmium tolerance by promoting hydrogen sulfide production.","D-CYSTEINE DESULFHYDRASE (D-CDES)","D-CYSTEINE DESULFHYDRASE (D-CDES);A. THALIANA 1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID DEAMINASE 1 (ATACD1);1-AMINOCYCLOPROPANE-1-CARBOXYLIC ACID DEAMINASE 1 (ACD1);D-CYSTEINE DESULFHYDRASE (DCD); (ATDCD)"]
["AT1G12840","tan","Encodes subunit C of the vacuolar H(+)-ATPase (V-ATPase). Bound and phosphorylated by AtWNK8. The mRNA is cell-to-cell mobile.","DE-ETIOLATED 3 (DET3)","DE-ETIOLATED 3 (DET3);ARABIDOPSIS THALIANA VACUOLAR ATP SYNTHASE SUBUNIT C (ATVHA-C)"]
["AT5G66680","tan","Encodes a protein ortholog of human SOT48 or yeast WBP1, an essential protein subunit of the oligosaccharyltransferase (OST) complex, which is responsible for the transfer in the ER of the N-linked glycan precursor onto Asn residues of candidate proteins.","DEFECTIVE GLYCOSYLATION (DGL1)","DEFECTIVE GLYCOSYLATION (DGL1)"]
["AT5G50420","tan","O-fucosyltransferase family protein;(source:Araport11)","DEFECTIVE IN SYSTEMIC DEFENSE INDUCED BY ABIETANE DITERPENOID 1 (DSA1)","DEFECTIVE IN SYSTEMIC DEFENSE INDUCED BY ABIETANE DITERPENOID 1 (DSA1)"]
["AT1G32210","tan","Encodes protein involved in suppression of apoptosis. Complements a mammalian apoptosis suppressor mutation.","DEFENDER AGAINST APOPTOTIC DEATH 1 (ATDAD1)","DEFENDER AGAINST APOPTOTIC DEATH 1 (ATDAD1)"]
["AT2G35520","tan","Defender against death (DAD family) protein;(source:Araport11)","DEFENDER AGAINST CELL DEATH 2 (DAD2)","DEFENDER AGAINST CELL DEATH 2 (DAD2)"]
["AT5G39830","tan","Encodes DEG8. Forms a hexamer with DEG5 in the thylakoid lumen. Involved in the cleavage of photodamaged D2 protein of photosystem II (PSII). Recombinant DEG8 is proteolytically active toward both a model substrate (beta-casein) and photodamaged D1 protein of photosystem II.","DEGRADATION OF PERIPLASMIC PROTEINS 8 (DEG8)","DEG PROTEASE 8 (DEGP8);DEGRADATION OF PERIPLASMIC PROTEINS 8 (DEG8)"]
["AT4G18370","tan","Encodes DEG5. Forms a hexamer with DEG8 in the thylakoid lumen. Involved in the cleavage of photodamaged D2 protein of photosystem II (PSII).","DEGRADATION OF PERIPLASMIC PROTEINS 5 (DEG5)","DEGRADATION OF PERIPLASMIC PROTEINS 5 (DEG5);DEGP PROTEASE 5 (DEGP5);PROTEASE HHOA PRECUSOR (HHOA)"]
["AT1G54410","tan","Encodes a KS-type dehydrin can reduce the formation of reactive oxygen species (ROS) from Cu.","DEHYDRIN 11KDA (HIRD11)","DEHYDRIN 11KDA (HIRD11); (ATHIRD11)"]
["AT1G75270","tan","One of three functional dehydroascorbate reductases. Catalyzes the glutathione (GSH)-dependent reduction of dehydroascorbate. DHAR2 is a cytoplasmic enzyme.","DEHYDROASCORBATE REDUCTASE 2 (DHAR2)","DEHYDROASCORBATE REDUCTASE 2 (DHAR2)"]
["AT5G13450","tan","delta subunit of Mt ATP synthase;(source:Araport11)","DELTA SUBUNIT OF MT ATP SYNTHASE (ATP5)","DELTA SUBUNIT OF MT ATP SYNTHASE (ATP5)"]
["AT4G14440","tan","encodes a cytosolic delta3, delta2-enoyl CoA isomerase, involved in unsaturated fatty acid degradation","3-HYDROXYACYL-COA DEHYDRATASE 1 (HCD1)","DELTA(3), DELTA(2)-ENOYL COA ISOMERASE 3 (ECI3);ARABIDOPSIS THALIANA DELTA(3), DELTA(2)-ENOYL COA ISOMERASE 3 (ATECI3);3-HYDROXYACYL-COA DEHYDRATASE 1 (HCD1)"]
["AT3G14362","tan","ROTUNDIFOLIA like 10;(source:Araport11)","ROTUNDIFOLIA LIKE 10 (RTFL10)","DEVIL 19 (DVL19);ROTUNDIFOLIA LIKE 10 (RTFL10)"]
["AT5G64290","tan","dicarboxylate transport 2.1;(source:Araport11)","DICARBOXYLATE TRANSPORT 2.1 (DIT2.1)","DICARBOXYLATE TRANSPORT 2.1 (DIT2.1); (DCT)"]
["AT3G43920","tan","Encodes a ribonuclease III family protein that is required for endogenous RDR2-dependent siRNA (but not miRNA) formation.","DICER-LIKE 3 (DCL3)","DICER-LIKE 3 (DCL3);DICER-LIKE 3 (ATDCL3)"]
["AT5G42800","tan","dihydroflavonol reductase. Catalyzes the conversion of dihydroquercetin to leucocyanidin in the biosynthesis of anthocyanins. Not expressed in roots (qRT-PCR). The mRNA is cell-to-cell mobile.","DIHYDROFLAVONOL 4-REDUCTASE (DFR)","DIHYDROFLAVONOL 4-REDUCTASE (DFR); (M318); (TT3)"]
["AT1G30825","tan","Involved in trichome maturation. mutant displays enlarged trichomes","DISTORTED TRICHOMES 2 (DIS2)","DISTORTED TRICHOMES 2 (DIS2);ACTIN-RELATED PROTEIN C2A (ARPC2A)"]
["AT1G53280","tan","Encodes a homolog of animal DJ-1 superfamily protein. In the A. thaliana genome, three genes encoding close homologs of human DJ-1 were identified AT3G14990 (DJ1A), AT1G53280 (DJ1B) and AT4G34020 (DJ1C). Among the three homologs, DJ1C is essential for chloroplast development and viability. It exhibits glyoxalase activity towards glyoxal and methylglyoxal.","DJ-1 HOMOLOG B (DJ1B)","DJ-1 HOMOLOG B (DJ1B);DJ-1 HOMOLOG B (AtDJ1B); (DJ-1B)"]
["AT1G67630","tan","DNA polymerase alpha 2;(source:Araport11)","DNA POLYMERASE ALPHA 2 (POLA2)","DNA POLYMERASE ALPHA 2 (POLA2);EMBRYO DEFECTIVE 2814 (EMB2814)"]
["AT2G42120","tan","DNA polymerase delta small subunit;(source:Araport11)","DNA POLYMERASE DELTA SMALL SUBUNIT (POLD2)","DNA POLYMERASE DELTA SMALL SUBUNIT (POLD2)"]
["AT1G20340","tan","recombination and DNA-damage resistance protein (DRT112) One of two Arabidopsis plastocyanin genes. Predominant form, expressed 10x higher than PETE1. PETE2 is thought to be post-transcriptionally regulated via copper accumulation and is involved in copper homeostasis. Mutation of this gene does not have obvious effect on photosynthesis. In plsp1-1 mutant plastids, the nonmature form of the protein localizes in the membrane.","DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112 (DRT112)","DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112 (DRT112);PLASTOCYANIN 2 (PETE2)"]
["AT1G48140","tan","Encodes a subunit of the dolichol phosphate mannase synthase (DPMS) complex that may serve as membrane anchors for the catalytic core, DPMS1, or provide catalytic assistance. It is localized in the ER and mediates isoprenyl-linked glycan biogenesis.","DOLICHOL PHOSPHATE MANNOSE SYNTHASE 3 (DPMS3)","DOLICHOL PHOSPHATE MANNOSE SYNTHASE 3 (DPMS3)"]
["AT3G19800","tan","Encodes the DUF177B version of the two DUF177 proteins in Arabidopsis. This version differs from DUF177A in containing a 23 aa insertion compared to the DUF177A sequence.","DOMAIN OF UNKNOWN FUNCTION 177 B (DUF177B)","DOMAIN OF UNKNOWN FUNCTION 177 B (DUF177B)"]
["AT3G62300","tan","Encodes a protein with Agenet/Tudor and DUF724 domains. It can interact with ABAP1, a negative regulator of DNA replication and transcription, with the plant histone modification 'reader' LHP1, and with non-modified histones. It may act as a link between DNA replication, transcription and chromatin remodeling during flower development. Loss of function mutant has a WT phenotype.","DOMAIN OF UNKNOWN FUNCTION 724 7 (DUF7)","DOMAIN OF UNKNOWN FUNCTION 724 7 (DUF7);ABAP1-I NTERACTING PROTEIN 1 (AIP1)"]
["AT5G61410","tan","Ribulose-5-phosphate-3-epimerase, which is a critical enzyme involved in the Calvin-Benson cycle and oxidative pentose phosphate pathways in higher plants. Plays an important role in the Calvin-Benson cycle and influences the photosynthetic capacity of chloroplasts.","D-RIBULOSE-5-PHOSPHATE-3-EPIMERASE (RPE)","D-RIBULOSE-5-PHOSPHATE-3-EPIMERASE (RPE);EMBRYO DEFECTIVE 2728 (emb2728)"]
["AT3G52180","tan","Encodes a plant-specific glucan phosphatase that contains a noncatalytic carbohydrate-binding module as well as a dual specificity protein phosphatase domain. SEX4 can dephosphorylate C6- and C3-glucosyl residues on native starch grains and related maltodextrin compounds in vitro. This protein interacts with the plant SnRK AKIN11, binds starch, and is localized in the chloroplast. sex4 mutants have elevated levels of starch.","STARCH-EXCESS 4 (SEX4)","DUAL-SPECIFICITY PROTEIN PHOSPHATASE 4 (DSP4);STARCH-EXCESS 4 (SEX4); (ATSEX4); (ATPTPKIS1)"]
["AT3G19820","tan","Involved in the conversion of the early brassinosteroid precursor 24-methylenecholesterol to campesterol. Brassinosteroids affect cellular elongation. Mutants have dwarf phenotype. DWF1 is a Ca2+-dependent calmodulin-binding protein.","DWARF 1 (DWF1)","DWARF 1 (DWF1);DIMINUTIA (DIM);ENHANCED VERY-LOW-FLUENCE RESPONSES 1 (EVE1);DIMINUTO 1 (DIM1);CABBAGE 1 (CBB1)"]
["AT1G64680","tan","Encodes a carotenoid isomerase with multi-substrate specificity and has a characteristic preference towards the catalysation of cis/cis interconversion of carotenoids. Located in chloroplast, high expression in mature leaf.","DWARF27-LIKE1 (D27-LIKE1)","DWARF27-LIKE1 (D27-LIKE1)"]
["AT4G01995","tan","beta-carotene isomerase D27;(source:Araport11)","DWARF27-LIKE2 (D27- LIKE2)","DWARF27-LIKE2 (D27- LIKE2)"]
["AT1G76260","tan","DWD (DDB1-binding WD40 protein) hypersensitive to ABA 2;(source:Araport11)","DWD (DDB1-BINDING WD40 PROTEIN) HYPERSENSITIVE TO ABA 2 (DWA2)","DWD (DDB1-BINDING WD40 PROTEIN) HYPERSENSITIVE TO ABA 2 (DWA2)"]
["AT1G47580","tan","DYW-deaminase domain containing ribonuclease.Activity is inhibited by RIP2.","DYW DOMAIN PROTEIN 1 (DYW1)","DYW DOMAIN PROTEIN 1 (DYW1)"]
["AT5G27930","tan","EGR2 functions as a negative regulator of plant growth with prominent effect on plant growth during drought stress. EGR2 regulates microtubule organization and likely affects additional cytoskeleton and trafficking processes along the plasma membrane.","E GROWTH-REGULATING 2 (EGR2)","E GROWTH-REGULATING 2 (EGR2)"]
["AT1G76180","tan","Encodes a dehydrin protein whose expression is induced early on in response to dehydration stress. This gene's expression to cold occurs in two waves, with early induction occurring within 1 h and secondary induction occurring 5 h after the beginning of cold stress. Expression is also induced in response to ABA but not in response to 2,4-D, BA, and GA3. ERD14 protein is capable of binding Ca2+, especially when the protein is phosphorylated.","EARLY RESPONSE TO DEHYDRATION 14 (ERD14)","EARLY RESPONSE TO DEHYDRATION 14 (ERD14)"]
["AT4G19120","tan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)","EARLY-RESPONSIVE TO DEHYDRATION 3 (ERD3)","EARLY-RESPONSIVE TO DEHYDRATION 3 (ERD3)"]
["AT3G26370","tan","O-fucosyltransferase family protein;(source:Araport11)","ECTIC ARABINOGALACTAN SYNTHESIS-RELATED (PAGR)","ECTIC ARABINOGALACTAN SYNTHESIS-RELATED (PAGR)"]
["AT5G05170","tan","Encodes a cellulose synthase isomer. CESA3 mutants have cellulose defect in the primary cell wall. Multiple lines of evidence suggest that CESA3, along with CESA1 and CESA6 are present in the same plasma membrane complex for cellulose biosynthesis. As inferred from the null role of secondary wall-type CesAs, included in a set of five primary wall-type CesAs that may support trichome cell wall thickening. The xylem cells in primary root have reduced cell expansion and higher than normal lignification.","CONSTITUTIVE EXPRESSION OF VSP 1 (CEV1)","ECTOPIC LIGNIFICATION 1 (ELI1);MULTIPLE RESPONSE EXPANSION 1 (MRE1);CELLULOSE SYNTHASE 3 (CESA3);CONSTITUTIVE EXPRESSION OF VSP 1 (CEV1); (ATCESA3); (ATH-B);ISOXABEN RESISTANT 1 (IXR1)"]
["AT1G80350","tan","encodes a p60 katanin protein that is expressed throughout the plant. Required for the specification of cell fates from early in development (in the meristem) through differentiation and for normal postmitotic organization of cortical microtubules into transverse arrays in root epidermis cells. Mutants display cytoskeletal defects.","ECTOPIC ROOT HAIR 3 (ERH3)","ECTOPIC ROOT HAIR 3 (ERH3);FURCA4 (FRC4); (AAA1);FRAGILE FIBER 2 (FRA2); (LUE1); (ATKTN1);KATANIN 1 (KTN1);FURCA2 (FRC2);BOTERO 1 (BOT1);FAT ROOT (FTR); (FRC4); (KATANIN)"]
["AT3G55830","tan","A member of the Glycosyltransferase Family 64, homologous to Poplar cambium-expressed GT64 gene. The EPC1 protein plays a critical role during plant development in maintaining the integrity of organs via cell-cell adhesion, thereby providing mechanical strength and facilitating the movement of metabolites throughout the plant.Loss of function specifically affects glycosylinositolphosphorylceramide (GIPC) mannosylation.","ECTOPICALLY PARTING CELLS (EPC1)","ECTOPICALLY PARTING CELLS (EPC1);GIPC MANNOSYL-TRANSFERASE1 (GMT1)"]
["AT5G26850","tan","Part of a nanodomain complex that tethers PI4K&#945;1 to the plasma membrane.","EFR3 OF PLANT 4 (EFOP4)","EFR3 OF PLANT 4 (EFOP4)"]
["AT5G13860","tan","ELCH-like protein;(source:Araport11)","ELCH-LIKE (ELC-Like)","ELCH-LIKE (ELC-Like);VACUOLAR PROTEIN SORTING 32.1 (VPS32.1);VACUOLAR PROTEIN SORTING 23B (VPS23B)"]
["AT1G17455","tan","Part of autonomous pathway complex (AuPC) containing FLD, LD, SDG26nts, EFL2, EFL4 and APRF1.","ELF4-LIKE 4 (ELF4-L4)","ELF4-LIKE 4 (EFL4);ELF4-LIKE 4 (ELF4-L4)"]
["AT3G06470","tan","ELO family protein containing a characteristic histidine motif which binds to AtCb5-B, interacts with AtBI-1. Together with AtCb5-B interacts with KCR1, PAS2, and CER10, which are essential for the synthesis of VLCFAs.","ELO HOMOLOG 2 (ELO2)","ELO HOMOLOG 2 (ELO2)"]
["AT5G23880","tan","Encodes a protein similar to the 100kD subunit of cleavage and polyadenylation specificity factor (CPSF), the factor responsible for the recognition of the AAUAAA motif during mRNA polyadenylation. The protein interacts with a portion of a nuclear poly(A) polymerase. It is likely to be a part of the mRNA 3'end formation apparatus.","CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100 (CPSF100)","EMBRYO DEFECTIVE 1265 (EMB1265);CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100 (ATCPSF100);ENHANCED SILENCING PHENOTYPE 5 (ESP5);CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100 (CPSF100)"]
["AT1G08260","tan","Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells.","TILTED 1 (TIL1)","EMBRYO DEFECTIVE 142 (EMB142);EMBRYO DEFECTIVE 2284 (EMB2284); (POL2A);EARLY IN SHORT DAYS 7 (ESD7);TILTED 1 (TIL1);EMBRYO DEFECTIVE 529 (EMB529);ABA OVERLY SENSITIVE 4 (ABO4)"]
["AT5G19620","tan","AtOEP80 is paralog to the chloroplastic protein translocation channel Toc75. Mutations in this locus result in embryo lethality.","OUTER ENVELOPE PROTEIN OF 80 KDA (OEP80)","EMBRYO DEFECTIVE 213 (EMB213);OUTER ENVELOPE PROTEIN OF 80 KDA (OEP80); (EMB213);TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 75-V (TOC75-V);ARABIDOPSIS THALIANA OUTER ENVELOPE PROTEIN OF 80 KDA (ATOEP80)"]
["AT5G10330","tan","Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal.","HISTIDINOL PHOSPHATE AMINOTRANSFERASE 1 (HPA1)","EMBRYO DEFECTIVE 2196 (EMB2196);HISTIDINOL PHOSPHATE AMINOTRANSFERASE 1 (ATHPA1);HISTIDINE BIOSYNTHESIS 6A (HISN6A);HISTIDINOL PHOSPHATE AMINOTRANSFERASE 1 (HPA1)"]
["AT5G02190","tan","encodes an aspartic protease, has an important role in determining cell fate during embryonic development and in reproduction processes. The loss-of-function mutation of PCS1 causes degeneration of both male and female gametophytes and excessive cell death of developing embryos during torpedo stage.","PROMOTION OF CELL SURVIVAL 1 (PCS1)","EMBRYO DEFECTIVE 24 (EMB24);PHYTOCHELATIN SYNTHASE 1 (PCS1); (ASP38);PROMOTION OF CELL SURVIVAL 1 (PCS1);ARABIDOPSIS THALIANA ASPARTIC PROTEASE 38 (ATASP38)"]
["AT4G36630","tan","Vacuolar sorting protein 39;(source:Araport11)","EMBRYO DEFECTIVE 2754 (EMB2754)","EMBRYO DEFECTIVE 2754 (EMB2754);VACUOLAR PROTEIN SORTING 39 (VPS39)"]
["AT2G39080","tan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)","EMBRYO DEFECTIVE 2799 (EMB2799)","EMBRYO DEFECTIVE 2799 (EMB2799)"]
["AT5G11890","tan","harpin-induced protein;(source:Araport11)","EMBRYO DEFECTIVE 3135 (EMB3135)","EMBRYO DEFECTIVE 3135 (EMB3135)"]
["AT5G41480","tan","Encodes a dihydrofolate synthetase based on yeast complementation experiments. This protein is involved in folate biosynthesis.","GLOBULAR ARREST1 (GLA1)","EMBRYO DEFECTIVE 9 (EMB9);GLOBULAR ARREST1 (GLA1); (79A);DHFS-FPGS HOMOLOG A (DFA);A. THALIANA DHFS-FPGS HOMOLOG A (ATDFA)"]
["AT2G41475","tan","Embryo-specific protein 3, (ATS3);(source:Araport11)","EMBRYO-SPECIFIC PROTEIN 3A (ATS3A)","EMBRYO-SPECIFIC PROTEIN 3A (ATS3A)"]
["AT5G66460","tan","Encodes a endo-beta-mannanase involved in seed germination and silique dehiscence.","ENDO-BETA-MANNASE 7 (MAN7)","ENDO-BETA-MANNASE 7 (MAN7); (AtMAN7)"]
["AT4G28100","tan","transmembrane protein;(source:Araport11)","ENDODERMIS7 (EN7)","ENDODERMIS7 (EN7)"]
["AT2G21600","tan","Key player of retrieval of ER membrane proteins The mRNA is cell-to-cell mobile.","ENDOPLASMATIC RETICULUM RETRIEVAL PROTEIN 1B (RER1B)","ENDOPLASMATIC RETICULUM RETRIEVAL PROTEIN 1B (ATRER1B);ENDOPLASMATIC RETICULUM RETRIEVAL PROTEIN 1B (RER1B)"]
["AT2G38960","tan","Encodes an oxidoreductin required for oxidative protein folding in the ER and exists in two distinct oxidized isoforms (Ox1 and Ox2), which are determined by the formation or breakage of the putative regulatory disulfide. AtERO2 is mainly present in the Ox2 redox state.","ENDOPLASMIC RETICULUM OXIDOREDUCTINS 2 (ERO2)","ENDOPLASMIC RETICULUM OXIDOREDUCTINS 2 (ERO2)"]
["AT1G63650","tan","Mutant has reduced trichomes, anthocyanin, and seed coat mucilage and abnormally patterned stomates. Mutants are defective in jasmonate-induced anthocyanin accumulation. Encodes a bHLH Transcription Factor 1. The protein is functionally redundant with GL3 and TT8 and interacts with TTG1, the myb proteins GL1, PAP1 and 2, CPC and TRY, and it will form heterodimers with GL3. Expression in N (non-hair cell forming) cell layers is negatively regulated by WER. Expression in H cells (hair cell forming) is promoted by CPC/TRY.","ENHANCER OF GLABRA 3 (EGL3)","ENHANCER OF GLABRA 3 (EGL3); (EGL1); (ATMYC-2); (ATEGL3)"]
["AT4G31820","tan","A member of the NPY family genes (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Encodes a protein with similarity to NHP3. Contains BTB/POZ domain. Promoter region has canonical auxin response element binding site and Wus binding site. Co-localizes to the late endosome with PID. Regulates cotyledon development through control of PIN1 polarity in concert with PID. Also involved in sepal and gynoecia development.","ENHANCER OF PINOID (ENP)","ENHANCER OF PINOID (ENP);NAKED PINS IN YUC MUTANTS 1 (NPY1); (ENP);MACCHI-BOU 4 (MAB4)"]
["AT1G30630","tan","Member of the Coat Protein I (COPI) complex is a seven-subunit coatomer complex consisting of the &#945;, &#946;, &#946;&#8242;, &#947;, &#948;, &#949;, and &#950; proteins. COPI is required for retrograde transport from the Golgi to the endoplasmic reticulum, Golgi maintenance, and cell plate formation.","EPSILON1 COAT PROTEIN (epsilon1-COP)","EPSILON1 COAT PROTEIN (epsilon1-COP)"]
["AT5G11710","tan","EPSIN1 plays an important role in the vacuolar trafficking of soluble proteins at the trans-Golgi network via its interaction with gamma-ADR, VTI11, VSR1, and clathrin. Associated with actin filaments and with the Golgi complex. Expressed in most tissues. The mRNA is cell-to-cell mobile.","EPSIN1 (EPS1)","EPSIN1 (EPS1)"]
["AT3G59290","tan","Involved in plant trans-Golgi network (TGN) transport.","EPSIN3 (EPS3)","EPSIN3 (EPS3)"]
["AT2G26330","tan","Homologous to receptor protein kinases. Involved in specification of organs originating from the shoot apical meristem. Contains a cytoplasmic protein kinase catalytic domain, a transmembrane region, and an extracellular leucine-rich repeat. ER has been identified as a quantitative trait locus for transpiration efficiency by influencing epidermal and mesophyll development, stomatal density and porosity of leaves. It has been implicated in resistance to the bacterium Ralstonia solanacearum and to the necrotrophic fungus Plectosphaerella cucumerina. Together with ERL1 and ERL2, ER governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. ER binds to the peptides STOMAGEN and EPF2 which compete for the same binding site. The ER-EFP2 complex activates MAPK signaling that inhibits stomatal development. ER-STOMAGEN does not activate MAPK signaling. Plants harboring loss of function alleles of er are more susceptible to heat stress than wild type. In Arabidopsis and other organisms, overexpression of ER confers thermotolerance via as yet undefined mechanisms.","ERECTA (ER)","ERECTA (ER);QUANTITATIVE RESISTANCE TO PLECTOSPHAERELLA 1 (QRP1)"]
["AT2G40940","tan","Ethylene receptor, subfamily 1. Has histidine kinase activity.","ETHYLENE RESPONSE SENSOR 1 (ERS1)","ETHYLENE RESPONSE SENSOR 1 (ERS1);ETHYLENE RESPONSE SENSOR (ERS)"]
["AT5G58550","tan","Encodes a paralog of ETO1, which is a negative regulator of ACS5 (a key enzyme in ethylene biosynthesis pathway). EOL2 also interacts with and inhibits the activity of ACS5.","ETO1-LIKE 2 (EOL2)","ETO1-LIKE 2 (EOL2)"]
["AT2G33860","tan","ettin (ett) mutations have pleiotropic effects on Arabidopsis flower development, causing increases in perianth organ number, decreases in stamen number and anther formation, and apical-basal patterning defects in the gynoecium. The ETTIN gene encodes a protein with homology to DNA binding proteins which bind to auxin response elements. ETT transcript is expressed throughout stage 1 floral meristems and subsequently resolves to a complex pattern within petal, stamen and carpel primordia. ETT probably functions to impart regional identity in floral meristems that affects perianth organ number spacing, stamen formation, and regional differentiation in stamens and the gynoecium. During stage 5, ETT expression appears in a ring at the top of the floral meristem before morphological appearance of the gynoecium, consistent with the proposal that ETT is involved in prepatterning apical and basal boundaries in the gynoecium primordium. It is a target of the ta-siRNA tasiR-ARF. ETT is also a target of AP2; integrateing the functions of AGAMOUS and APETALA2 in floral meristem determinacy. Positive regulation of drought stress response genes.","ETTIN (ETT)","ETTIN (ETT);AUXIN RESPONSE TRANSCRIPTION FACTOR 3 (ARF3)"]
["AT1G13020","tan","Encodes eIF4B2, eukaryotic initiation factor 4B2.","EUKARYOTIC INITIATION FACTOR 4B2 (EIF4B2)","EUKARYOTIC INITIATION FACTOR 4B2 (EIF4B2)"]
["AT5G12370","tan","exocyst complex component sec10;(source:Araport11)","EXOCYST COMPLEX COMPONENT SEC10 (SEC10)","EXOCYST COMPLEX COMPONENT SEC10 (SEC10)"]
["AT1G72470","tan","A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN D1 (EXO70D1)","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN D1 (EXO70D1);EXOCYST SUBUNIT EXO70 FAMILY PROTEIN D1 (ATEXO70D1)"]
["AT5G09440","tan","EXORDIUM like 4;(source:Araport11)","EXORDIUM LIKE 4 (EXL4)","EXORDIUM LIKE 4 (EXL4)"]
["AT2G17230","tan","EXORDIUM like 5;(source:Araport11)","EXORDIUM LIKE 5 (EXL5)","EXORDIUM LIKE 5 (EXL5)"]
["AT2G03090","tan","member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","EXPANSIN A15 (EXPA15)","EXPANSIN A15 (ATEXPA15);EXPANSIN 15 (EXP15); (ATEXP15); (ATHEXP ALPHA 1.3);EXPANSIN A15 (EXPA15)"]
["AT2G39700","tan","putative expansin. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio). Involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana.","EXPANSIN A4 (EXPA4)","EXPANSIN A4 (ATEXPA4); (ATEXP4); (ATHEXP ALPHA 1.6);EXPANSIN A4 (EXPA4);EXPANSIN A4 (XPA4)"]
["AT3G57630","tan","Encodes a glycoprotein glycosyl transferase ExAD. Knockout mutants show truncated root hair phenotype.","EXTENSIN ARABINOSE DEFICIENT TRANSFERASE (EXAD)","EXTENSIN ARABINOSE DEFICIENT TRANSFERASE (EXAD)"]
["AT1G12090","tan","extensin-like protein (ELP)","EXTENSIN-LIKE PROTEIN (ELP)","EXTENSIN-LIKE PROTEIN (ELP)"]
["AT5G65740","tan","Component of Fanconi anemia (FA) complex.","FANCONI ANEMIA COMPLEX PROTEIN L (FANCL)","FANCONI ANEMIA COMPLEX PROTEIN L (FANCL)"]
["AT5G58560","tan","FOLK is a farnesol kinase that can phosphorylate farnesol using an NTP donor. It can also phosphorylate geraniol, or geranylgeraniol, but it prefers farnesol in experiments performed using yeast membranes. folk loss-of-function mutants show ABA hypersensitivity in a seed germination assay and the mutants also exhibit abnormal flower development, including extra carpel formation, when subjected to water stress. The mRNA is cell-to-cell mobile.","FARNESOL KINASE (FOLK)","FARNESOL KINASE (FOLK)"]
["AT5G47770","tan","Encodes a protein with farnesyl diphosphate synthase activity.","FARNESYL DIPHOSPHATE SYNTHASE 1 (FPS1)","FARNESYL DIPHOSPHATE SYNTHASE 1 (FPS1)"]
["AT4G17190","tan","Encodes a protein with farnesyl diphosphate synthase activity, which catalyzes the rate limiting step in isoprenoid biosynthesis. Its mRNA is most abundantly expressed in flowers.","FARNESYL DIPHOSPHATE SYNTHASE 2 (FPS2)","FARNESYL DIPHOSPHATE SYNTHASE 2 (FPS2)"]
["AT3G59380","tan","Encodes the alpha-subunit shared between protein farnesyltransferase and protein geranylgeranyltransferase-I. Involved in protein prenylation: covalent attachment of the C-15 isoprene farnesyl or the C-20 isoprene geranylgeranyl groups to the C-terminal end of some proteins. Involved in shoot and flower meristem homeostasis, and response to ABA and drought. Also regulates leaf cell shape. Mutant is epistatic to era1.","FARNESYLTRANSFERASE A (FTA)","FARNESYLTRANSFERASE A (FTA);PLURIPETALA (PLP);FARNESYLTRANSFERASE A (ATFTA); (PFT/PGGT-IALPHA)"]
["AT2G37678","tan","Positive regulator of photomorphogenesis in far-red light. Most abundant in young seedlings in the dark. Downregulated in the light and older as plants develop. Localized in the nucleus and the cytoplasm. Nuclear localization strongest in the dark. Degraded through the 26S proteasome. Regulated by PHYA. It is specifically required for the light-regulated nuclear accumulation of phyA ( but not phyB) likely by shuttling PHYA into the nucleus.","FAR-RED ELONGATED HYPOCOTYL 1 (FHY1)","FAR-RED ELONGATED HYPOCOTYL 1 (FHY1);PHYTOCHROME A SIGNAL TRANSDUCTION 3 (PAT3);FAR-RED ELONGATED HYPOCOTYL 1 (FRY1)"]
["AT5G06390","tan","FASCICLIN-like arabinogalactan protein 17 precursor;(source:Araport11)","FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17 PRECURSOR (FLA17)","FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 17 PRECURSOR (FLA17)"]
["AT5G18580","tan","fass mutants have aberrant cell shapes due to defects in arrangement of cortical microtubules. Encodes a protein highly conserved in higher plants and similar in its C-terminal part to B' regulatory subunits of type 2A protein phosphatases. Interacts with an Arabidopsis type A subunit of PP2A in the yeast two-hybrid system.","FASS 1 (FASS)","FASS 1 (FASS);TONNEAU 2 (TON2); (FASS 2); (FS1);GORDO (GDO);EMBRYO DEFECTIVE 40 (EMB40)"]
["AT3G12120","tan","Major enzyme responsible for the synthesis of 18:2 fatty acids in the endoplasmic reticulum. Contains His-rich motifs, which contribute to the interaction with the electron donor cytochrome b5. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.","FATTY ACID DESATURASE 2 (FAD2)","FATTY ACID DESATURASE 2 (FAD2); (ATFAD2)"]
["AT3G57280","tan","Encodes a chloroplast inner envelope localized member of the Tmemb_14 gene family. FAX1 is involved in fatty acid and lipid homeostasis and likely functions as a fatty acid transporter that exports fatty acids from the plastid. The mRNA is cell-to-cell mobile.","FATTY ACID EXPORT 1 (FAX1)","FATTY ACID EXPORT 1 (FAX1); (ATFAX1)"]
["AT4G20870","tan","encodes a fatty acid hydroxylase, required for the AtBI-1-mediated suppression of programmed cell death.","FATTY ACID HYDROXYLASE 2 (FAH2)","FATTY ACID HYDROXYLASE 2 (FAH2);ARABIDOPSIS FATTY ACID HYDROXYLASE 2 (ATFAH2)"]
["AT5G22500","tan","Encodes a member of the eight-member gene family encoding alcohol-forming fatty acyl-CoA reductases (FARs) identified in Arabidopsis thaliana. Three of the FARs, FAR1 (At5g22500), FAR4 (At3g44540) and FAR5 (At3g44550), are shown to generate the fatty alcohols found in root, seed coat, and wound-induced leaf tissue.","FATTY ACID REDUCTASE 1 (FAR1)","FATTY ACID REDUCTASE 1 (FAR1)"]
["AT2G16365","tan","PCH1 binds and stabilizes the active (Pfr) form of phytochrome B and is involved in the formation of photobodies in the nucleus. PCH1 is expressed in evenings and is associated to the evening complex through binding to phyB, and represses hypocotyl elongation and growth. Using mass spec, the existence of the At2g16365.2 isoform has been verified, however here is no evidence that any of the other three variants are present. Atg2G16365.2 will be assigned PCH1; exon 4 and 5 in the other variants are actually another gene of the F-box/DUF295 family with gene name FDA10.","PHOTOPERIODIC CONTROL OF HYPOCOTYL 1 (PCH1)","F-BOX/DUF295 ANCESTRAL 10 (ATFDA10);PHOTOPERIODIC CONTROL OF HYPOCOTYL 1 (PCH1)"]
["AT1G10960","tan","Phosphatidylinositol 4-phosphate 5-kinase (PIP5K) enzyme family member.","FERREDOXIN 1 (FD1)","FERREDOXIN 1 (FD1);FERREDOXIN 1 (ATFD1)"]
["AT5G01600","tan","Encodes a ferretin protein that is targeted to the chloroplast. Member of a Ferritin gene family. Gene expression is induced in response to iron overload and by nitric oxide. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.","FERRETIN 1 (FER1)","FERRETIN 1 (FER1);ARABIDOPSIS THALIANA FERRETIN 1 (ATFER1)"]
["AT2G30390","tan","Encodes one of two ferrochelatase genes in Arabidopsis. Ferrochelatase is the terminal enzyme of heme biosynthesis. FC-II is speculated to operate in photosynthetic cytochromes.","FERROCHELATASE 2 (FC2)","FERROCHELATASE 2 (FC2)"]
["AT1G51110","tan","PAP/fibrillin (ECM1) localized to chloroplasts; involved in structural activity.","FIBRILLIN10 (FBN10)","FIBRILLIN10 (FBN10)"]
["AT5G35700","tan","Encodes FIMBRIN5, an actin bundling factor required for pollen germination and pollen tube growth. Different members of the fimbrin/plastin family have diverged biochemically during evolution to generate either tight actin bundles or loose networks with distinct biochemical and biophysical properties. FIM4 generates both actin bundles and branched actin filaments whereas FIM5 only generates actin bundles.","FIMBRIN5 (FIM5)","FIMBRIN5 (FIM5);FIMBRIN-LIKE PROTEIN 2 (FIM2)"]
["AT5G48580","tan","Endoplasmic reticulum (ER) localized immunophilin protein which possesses PPIase activity. Positively regulates plant immunity in response to Phytophthora infection. Host target of PcAvr3a12 during early P. capsici infection. Involved in ER stress sensing and is required for ER stress-mediated plant immunity.","FK506- AND RAPAMYCIN-BINDING PROTEIN 15 KD-2 (FKBP15-2)","FK506- AND RAPAMYCIN-BINDING PROTEIN 15 KD-2 (FKBP15-2)"]
["AT5G45680","tan","Peptidyl-Prolyl Isomerase located in chloroplast thylakoid lumen The mRNA is cell-to-cell mobile.","FK506-BINDING PROTEIN 13 (FKBP13)","FK506-BINDING PROTEIN 13 (FKBP13);FK506 BINDING PROTEIN 13 (ATFKBP13)"]
["AT5G14760","tan","At5g14760 encodes for L-aspartate oxidase involved in the early steps of NAD biosynthesis. In contrary to the EC 1.4.3.16 (l-aspartate oxidase - deaminating) the enzyme catalyzes the reaction L-aspartate + O2 = iminoaspartate (alpha-iminosuccinate) + H2O2. Flavoenzyme-encoding gene.","L-ASPARTATE OXIDASE (AO)","FLAGELLIN-INSENSITIVE 4 (FIN4);L-ASPARTATE OXIDASE (AO)"]
["AT3G51240","tan","Encodes flavanone 3-hydroxylase that is coordinately expressed with chalcone synthase and chalcone isomerases and is involved in flavonoid biosynthesis. Not responsive to auxin or ethylene stimulus (qRT-PCR).","FLAVANONE 3-HYDROXYLASE (F3H)","FLAVANONE 3-HYDROXYLASE (F3H);TRANSPARENT TESTA 6 (TT6); (F3'H)"]
["AT1G79790","tan","Encodes a chloroplast-localized FMN hydrolase that whose phosphatase activity is FMN-specific.","FLAVIN MONONUCLEOTIDE HYDROLASE 1 (FHY1)","FLAVIN MONONUCLEOTIDE HYDROLASE 1 (FHY1);ARABIDOPSIS THALIANA CHLOROPLAST FMN HYDROLASE 1 (ATCPFHY1); (PYRP1)"]
["AT1G12200","tan","Putative flavin monooxygenase.","FLAVIN MONOOXYGENASE (FMO)","FLAVIN MONOOXYGENASE (FMO)"]
["AT1G68050","tan","Encodes FKF1, a flavin-binding kelch repeat F box protein, is clock-controlled, regulates transition to flowering. Forms a complex with GI on the CO promoter to regulate CO expression.","FLAVIN-BINDING, KELCH REPEAT, F BOX 1 (FKF1)","FLAVIN-BINDING, KELCH REPEAT, F BOX 1 (FKF1); (ADO3)"]
["AT1G62570","tan","belongs to the flavin-monooxygenase (FMO) family, encodes a glucosinolate S-oxygenase that catalyzes the conversion of methylthioalkyl glucosinolates to methylsulfinylalkyl glucosinolates The mRNA is cell-to-cell mobile.","FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 4 (FMO GS-OX4)","FLAVIN-MONOOXYGENASE GLUCOSINOLATE S-OXYGENASE 4 (FMO GS-OX4)"]
["AT5G54500","tan","Encodes a flavin mononucleotide-binding flavodoxin-like quinone reductase that is a primary auxin-response gene.","FLAVODOXIN-LIKE QUINONE REDUCTASE 1 (FQR1)","FLAVODOXIN-LIKE QUINONE REDUCTASE 1 (FQR1)"]
["AT2G20650","tan","Encodes a putative RING E3 ubiquitin ligase based on its 84.5% amino acid identity with FLY1, which possesses this activity in vitro. It is predicted to be localized to the endomembrane system based on protein topology.The mucilage of fly2 mutant seeds hydrated in water resembles wild type seed mucilage.","FLYING SAUCER 2 (FLY2)","FLYING SAUCER 2 (FLY2)"]
["AT4G27760","tan","Encodes an oxidoreductase required for vegetative shoot apex development. Mutants display disruptions in leaf positioning and meristem maintenance.","FOREVER YOUNG (FEY)","FOREVER YOUNG (FEY); (FEY3)"]
["AT2G43800","tan","Localizes to plasmodesmata (PD) through its transmembrane domain and is required for normal intercellular trafficking. Functions in a partially redundant manner with its closest homolog AtFH1. Regulates PD's permeability by anchoring actin filaments to PD. Caps the barbed end of actin filaments and stabilizes them in vitro.","FORMIN 2 (FH2)","FORMIN 2 (FH2);FORMIN HOMOLOGY 2 (FH2)"]
["AT5G48360","tan","Actin-binding FH2 (formin homology 2) family protein;(source:Araport11)","FORMIN 9 (FH9)","FORMIN 9 (FH9)"]
["AT3G25500","tan","Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event.","FORMIN HOMOLOGY 1 (AFH1)","FORMIN HOMOLOGY 1 (FH1);FORMIN HOMOLOGY 1 (AFH1);ARABIDOPSIS THALIANA FORMIN HOMOLOGY 1 (ATFH1); (AHF1)"]
["AT1G71010","tan","Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. The mRNA is cell-to-cell mobile.","FORMS APLOID AND BINUCLEATE CELLS 1C (FAB1C)","FORMS APLOID AND BINUCLEATE CELLS 1C (FAB1C)"]
["AT5G67590","tan","Mutant leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Encode a protein with high similarity to the 18-kD Fe-S subunit of complex I (NADH dehydrogenase, EC 1.6.5.3) in the mitochondrial electron transfer chain. The mRNA is cell-to-cell mobile.","FROSTBITE1 (FRO1)","FROSTBITE1 (FRO1);NADH:UBIQUINONE OXIDOREDUCTASE FE-S PROTEIN4 (NDUFS4)"]
["AT4G38970","tan","Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.","FRUCTOSE-BISPHOSPHATE ALDOLASE 2 (FBA2)","FRUCTOSE-BISPHOSPHATE ALDOLASE 2 (FBA2); (ATFBA2)"]
["AT3G52930","tan","Fructose 1,6-biphosphate aldolase.","FRUCTOSE-BISPHOSPHATE ALDOLASE 8 (FBA8)","FRUCTOSE-BISPHOSPHATE ALDOLASE 8 (FBA8); (ATFBA8)"]
["AT5G06850","tan","Encodes an endoplasmic reticulum protein that is involved in the transport of the florigen FT from companion cells to sieve elements, thus affecting FT transport through the phloem to the SAM.","FT-INTERACTING PROTEIN 1 (FTIP1)","FT-INTERACTING PROTEIN 1 (FTIP1);MULTIPLE C2 DOMAIN AND TRANSMEMBRANE REGION PROTEIN 1 (MCTP1)"]
["AT1G50250","tan","encodes an FTSH protease that is localized to the chloroplast. Involved in the D1 repair cycle of Photosystem II. FtsH1 and FtsH5 are interchangeable in thylakoid membranes.","FTSH PROTEASE 1 (FTSH1)","FTSH PROTEASE 1 (FTSH1)"]
["AT5G02160","tan","Zinc-finger domain containing protein involved in abiotic stress response. Possesses an N-terminal transit peptide followed by a hydrophobic domain and a zinc-finger domain. Despite the presence of a zinc-finger domain (C4-type) with two CXXCXGXG conserved repeats, characteristic of DNAJ protein, the conserved J domain is absent in FIP. Interacts with FtsH5. Gene expression levels are reduced and negatively regulates stress response genes during stress conditions.","FTSH5 INTERACTING PROTEIN (FIP)","FTSH5 INTERACTING PROTEIN (FIP)"]
["AT3G10700","tan","Encodes a GHMP kinase family protein that acts as a galacturonic acid-1-phosphate kinase that catalyzes the production of galacturonic acid-1-phosphate. This is a precursor of the important cell wall building block UDP-galacturonic acid. Based on gene trap line GT8007, the gene appears to be expressed in a petal and stamen-specific manner, between flower stages 8 to 11, however, later RT-qPCR analysis demonstrates that the transcript is present throughout the plant in all tissues tested.","GALACTURONIC ACID KINASE (GalAK)","GALACTURONIC ACID KINASE (GalAK)"]
["AT1G18580","tan","Encodes a protein with putative galacturonosyltransferase activity.GAUT11 is required for pectin synthesis in seed coat epidermal cells and normal mucilage release.","GALACTURONOSYLTRANSFERASE 11 (GAUT11)","GALACTURONOSYLTRANSFERASE 11 (GAUT11)"]
["AT5G15470","tan","Encodes a protein with putative galacturonosyltransferase activity.","GALACTURONOSYLTRANSFERASE 14 (GAUT14)","GALACTURONOSYLTRANSFERASE 14 (GAUT14)"]
["AT2G38650","tan","Galacturonosyltransferase (GAUT) family member, interacts with GAUT1. Required for synthesis of native homogalacturonan in growing pollen tubes; critical role in pollen tube growh and male fertility.","GALACTURONOSYLTRANSFERASE 7 (GAUT7)","GALACTURONOSYLTRANSFERASE 7 (GAUT7);LIKE GLYCOSYL TRANSFERASE 7 (LGT7)"]
["AT3G25140","tan","Quasimodo1, encodes a glycosyltransferase, involved in homogalacturonan biosynthesis; mutant shows cell adhesion defect and lower wall uronic acid content. The mRNA is cell-to-cell mobile.","QUASIMODO 1 (QUA1)","GALACTURONOSYLTRANSFERASE 8 (GAUT8);QUASIMODO 1 (QUA1)"]
["AT3G02350","tan","Encodes a protein with putative galacturonosyltransferase activity. The mRNA is cell-to-cell mobile.","GALACTURONOSYLTRANSFERASE 9 (GAUT9)","GALACTURONOSYLTRANSFERASE 9 (GAUT9)"]
["AT1G24170","tan","Encodes a protein with putative galacturonosyltransferase activity.","(LGT9)","GALACTURONOSYLTRANSFERASE-LIKE 8 (GATL8); (LGT9)"]
["AT1G19580","tan","Encodes mitochondrial gamma carbonic anhydrase. Component of the NADH dehydrogenase complex.","GAMMA CARBONIC ANHYDRASE 1 (GAMMA CA1)","GAMMA CARBONIC ANHYDRASE 1 (GAMMA CA1)"]
["AT5G63510","tan","Encodes a mitochondrial gamma carbonic anhydrase-like protein. Component of the NADH dehydrogenase complex.","GAMMA CARBONIC ANHYDRASE LIKE 1 (GAMMA CAL1)","GAMMA CARBONIC ANHYDRASE LIKE 1 (GAMMA CAL1)"]
["AT2G33040","tan","gamma subunit of Mt ATP synthase;(source:Araport11)","GAMMA SUBUNIT OF MT ATP SYNTHASE (ATP3)","GAMMA SUBUNIT OF MT ATP SYNTHASE (ATP3)"]
["AT5G24280","tan","Encodes GMI1, a structural-maintenance-of-chromosomes-hinge domain-containing protein. Involved in somatic homologous recombination.","GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1 (GMI1)","GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1 (GMI1)"]
["AT3G61650","tan","Required for centrosomal and noncentrosomal microtubule nucleation. Involved in specification of cell identity, such as stomatal patterning. Constitutively expressed throughout plant.","GAMMA-TUBULIN (TUBG1)","GAMMA-TUBULIN (TUBG1)"]
["AT3G53760","tan","Encodes GCP4 (gamma-Tubulin Complex Protein 4), required for microtubule organization.","GAMMA-TUBULIN COMPLEX PROTEIN 4 (GCP4)","GAMMA-TUBULIN COMPLEX PROTEIN 4 (GCP4); (ATGCP4)"]
["AT3G06740","tan","Encodes a member of the GATA factor family of zinc finger transcription factors.","GATA TRANSCRIPTION FACTOR 15 (GATA15)","GATA TRANSCRIPTION FACTOR 15 (GATA15)"]
["AT4G17570","tan","Encodes a member of the GATA factor family of zinc finger transcription factors.","GATA TRANSCRIPTION FACTOR 26 (GATA26)","GATA TRANSCRIPTION FACTOR 26 (GATA26)"]
["AT4G34680","tan","Encodes a member of the GATA factor family of zinc finger transcription factors.","GATA TRANSCRIPTION FACTOR 3 (GATA3)","GATA TRANSCRIPTION FACTOR 3 (GATA3)"]
["AT5G66320","tan","Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate.","GATA TRANSCRIPTION FACTOR 5 (GATA5)","GATA TRANSCRIPTION FACTOR 5 (GATA5)"]
["AT3G54810","tan","Encodes a protein containing a GATA type zinc finger domain that is expressed in the embryo axis and involved in germination. Mutants have a reduced rate of germination even when stratified.","BLUE MICROPYLAR END 3 (BME3)","GATA TRANSCRIPTION FACTOR 8 (GATA8);BLUE MICROPYLAR END 3-ZINC FINGER (BME3-ZF);BLUE MICROPYLAR END 3 (BME3)"]
["AT4G32890","tan","Encodes a member of the GATA factor family of zinc finger transcription factors.","GATA TRANSCRIPTION FACTOR 9 (GATA9)","GATA TRANSCRIPTION FACTOR 9 (GATA9)"]
["AT5G37500","tan","Encodes a guard cell outward potassium channel. Belongs to the Shaker family K+ channel. This family includes five groups based on phylogenetic analysis (FEBS Letters (2007) 581: 2357): I (inward rectifying channel): AKT1 (AT2G26650), AKT5 (AT4G32500) and SPIK (also known as AKT6, AT2G25600); II (inward rectifying channel): KAT1 (AT5G46240) and KAT2 (AT4G18290); III (weakly inward rectifying channel): AKT2 (AT4G22200); IV (regulatory subunit involved in inwardly rectifying conductance formation): KAT3 (also known as AtKC1, AT4G32650); V (outward rectifying channel): SKOR (AT3G02850) and GORK (AT5G37500). Mutants have increased water consumption and limited stomatal closure in response to abscisic and jasmonic acids. It forms a heteromeric K(out) channels with SKOR. The gene is expressed ubiquitously in root and the vasculature and guard cells of leaves. Expression is suppressed during agrobacterium-induced tumor formation and increased in response to water deprivation and cold.","GATED OUTWARDLY-RECTIFYING K+ CHANNEL (GORK)","GATED OUTWARDLY-RECTIFYING K+ CHANNEL (GORK)"]
["AT1G72030","tan","A dark-induced and highly-expressed melatonin synthetase encoding serotonin N-acetyltransferase.","GCN5&#8208;RELATED N&#8208;ACETYLTRANSFERASE 10 (GNAT10)","GCN5&#8208;RELATED N&#8208;ACETYLTRANSFERASE 10 (GNAT10); (SNAT6)"]
["AT4G19985","tan","Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11)","GCN5&#8208;RELATED N&#8208;ACETYLTRANSFERASE 3 (GNAT3)","GCN5&#8208;RELATED N&#8208;ACETYLTRANSFERASE 3 (GNAT3)"]
["AT4G28030","tan","Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11)","GCN5&#8208;RELATED N&#8208;ACETYLTRANSFERASE 7 (GNAT7)","GCN5&#8208;RELATED N&#8208;ACETYLTRANSFERASE 7 (GNAT7)"]
["AT2G04845","tan","Acyl-CoA N-acyltransferases (NAT) superfamily protein;(source:Araport11)","GCN5&#8208;RELATED N&#8208;ACETYLTRANSFERASE 9 (GNAT9)","GCN5&#8208;RELATED N&#8208;ACETYLTRANSFERASE 9 (GNAT9)"]
["AT5G28840","tan","Encodes a protein with GDP-D-mannose 3',5'-epimerase activity. The enzyme is involved in ascorbate biosynthesis. It catalyzes the conversion of GDP-D-mannose to GDP-L-galactose.","GDP-D-MANNOSE 3 (GME)","GDP-D-MANNOSE 3 (GME)"]
["AT1G22300","tan","Encodes a 14-3-3 protein. This protein is reported to interact with the BZR1 transcription factor involved in brassinosteroid signaling and may affect the nucleocytoplasmic shuttling of BZR1. Might act as a stabilization factor to mediate the oligomerization of REM on the plasma membrane.","GENERAL REGULATORY FACTOR 10 (GRF10)","GENERAL REGULATORY FACTOR 10 (GRF10); (GF14 EPSILON);14-3-3 PROTEIN G-BOX FACTOR14 EPSILON (14-3-3EPSILON)"]
["AT3G59400","tan","GUN, genomes uncoupled, is necessary for coupling the expression of some nuclear genes to the functional state of the chloroplast. Binds to the magnesium chelatase complex and promotes formation of the substrate,a tetrapyrrole signaling molecule. Porphyrin-binding protein that enhances the activity of Mg-chelatase. Although required for chlorophyll accumulation under normal growth conditions, GUN4 is not essential for chlorophyll synthesis.","GENOMES UNCOUPLED 4 (GUN4)","GENOMES UNCOUPLED 4 (GUN4)"]
["AT2G39550","tan","encodes the beta subunit of geranylgeranyl transferase (GGT-IB), involved in both ABA-mediated and auxin signaling pathways.","(PGGT-I)","GERANYLGERANYLTRANSFERASE-I BETA SUBUNIT (ATGGT-IB); (GGB); (PGGT-I)"]
["AT2G22475","tan","Encodes GL2-expression modulator (GEM). Involved in the spatial control of cell division, patterning and differentiation of Arabidopsis root epidermal cells. GEM interacts with CDT1, a DNA replication protein and TTG1 (TRANSPARENT TESTA GLABRA1), a WD40-repeat protein involved in GL2-dependent cell fate decision. GEM seems to participate in the maintenance of a repressor histone H3 epigenetics status of the GL2 and CPC (CAPRICE) promoters.","GL2-EXPRESSION MODULATOR (GEM)","GL2-EXPRESSION MODULATOR (GEM)"]
["AT4G10060","tan","Glucosylceramidase that preferentially hydrolyzes long acyl chain glucosylceramides.","GLCCER-DEGRADING ENZYME (GLUCOSYLCERAMIDASE) 3 (GCD3)","GLCCER-DEGRADING ENZYME (GLUCOSYLCERAMIDASE) 3 (GCD3)"]
["AT3G59100","tan","encodes a protein similar to callose synthase","GLUCAN SYNTHASE-LIKE 11 (GSL11)","GLUCAN SYNTHASE-LIKE 11 (ATGSL11); (gsl11);GLUCAN SYNTHASE-LIKE 11 (GSL11)"]
["AT5G35790","tan","Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root.","GLUCOSE-6-PHOSPHATE DEHYDROGENASE 1 (G6PD1)","GLUCOSE-6-PHOSPHATE DEHYDROGENASE 1 (G6PD1)"]
["AT3G47960","tan","Encodes a high-affinity, proton-dependent glucosinolate-specific transporter that is crucial for the transport of both methionine- and tryptophan-derived glucosinolates to seeds.","NRT1/ PTR FAMILY 2.10 (NPF2.10)","GLUCOSINOLATE TRANSPORTER-1 (GTR1); (ATNPF2.10);NRT1/ PTR FAMILY 2.10 (NPF2.10)"]
["AT5G34940","tan","The protein is predicted (WoLF PSORT program) to be membrane-associated.","GLUCURONIDASE 3 (GUS3)","GLUCURONIDASE 3 (GUS3);GLUCURONIDASE 3 (AtGUS3)"]
["AT5G18170","tan","Encodes the 43 kDa alpha-subunit of the glutamate dehydrogenase with a putative mitochondrial transit polypeptide and NAD(H)- and alpha-ketoglutarate-binding domains. Mitochondrial localization confirmed by subcellular fractionation. Combines in several ratios with GDH2 protein (GDH-beta) to form seven isoenzymes. Catalyzes the cleavage of glycine residues. May be involved in ammonia assimilation under conditions of inorganic nitrogen excess. The enzyme is almost exclusively found in the mitochondria of stem and leaf companion cells.","GLUTAMATE DEHYDROGENASE 1 (GDH1)","GLUTAMATE DEHYDROGENASE 1 (GDH1)"]
["AT4G28730","tan","Encodes a glutaredoxin GrxC5. GrxC5 exists as two forms when expressed in Escherichia coli. The monomeric apoprotein possesses deglutathionylation activity mediating the recycling of plastidial methionine sulfoxide reductase B1 and peroxiredoxin IIE, whereas the dimeric holoprotein incorporates a [2Fe-2S] cluster.","GLUTAREDOXIN C5 (GrxC5)","GLUTAREDOXIN C5 (GrxC5)"]
["AT2G43350","tan","Glutathione peroxidase. Functions as both a redox transducer and a scavenger in abscisic acid and drought stress responses. Interacts with ABI2 and ABI1.","GLUTATHIONE PEROXIDASE 3 (GPX3)","GLUTATHIONE PEROXIDASE 3 (ATGPX3);GLUTATHIONE PEROXIDASE 3 (GPX3); (GPXL3)"]
["AT1G63460","tan","Encodes GPX8 (glutathione peroxidase 8). Involved in the suppression of oxidative damages in nucleus and cytosol. The mRNA is cell-to-cell mobile.","GLUTATHIONE PEROXIDASE 8 (GPX8)","GLUTATHIONE PEROXIDASE 8 (GPX8); (ATGPX8); (GPXL8)"]
["AT1G78370","tan","Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","GLUTATHIONE S-TRANSFERASE TAU 20 (GSTU20)","GLUTATHIONE S-TRANSFERASE TAU 20 (ATGSTU20);GLUTATHIONE S-TRANSFERASE TAU 20 (GSTU20)"]
["AT1G17190","tan","Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002).","GLUTATHIONE S-TRANSFERASE TAU 26 (GSTU26)","GLUTATHIONE S-TRANSFERASE TAU 26 (ATGSTU26);GLUTATHIONE S-TRANSFERASE TAU 26 (GSTU26)"]
["AT3G26650","tan","Encodes one of the two subunits forming the photosynthetic glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and as such a constituent of the supramolecular complex with phosphoribulokinase (PRK) thought to be linked by a small peptide encoded by CP12-2. GapA-1 is coordinately expressed by light with PRK and CP12-2. The enzyme activity, tested in leaf protein extracts dropped significantly after external sucrose treatment for the photosynthetic GAPDH (NADPH-dependent) but not for the cytosolic GAPDH (NADH-dependent).","GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT (GAPA)","GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT (GAPA);GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 1 (GAPA-1); (GAPA1)"]
["AT1G42970","tan","Encodes chloroplast localized glyceraldehyde-3-phosphate dehydrogenase that can use both NADH and NADPH to reduce 1,3-diphosphate glycerate. It forms A2B2 heterotetramers with GapA forms of the GADPH enzyme. These complexes are active in the light under reducing conditions, but show reduced NADPH-dependent activity in response to oxidized thioredoxins and increased NAD(H)/NADP(H) ratios due to the formation of inactive A8B8 hexadecamers. The mRNA is cell-to-cell mobile.","GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT (GAPB)","GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE B SUBUNIT (GAPB)"]
["AT1G13440","tan","The expression level of GAPC-2 is upregulated in Arabidopsis seedlings exposed to cadmium.","GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2 (GAPC2)","GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C-2 (GAPC-2);GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE C2 (GAPC2)"]
["AT5G60620","tan","Glycerol-3-phosphate acyltransferase localized to the ER. Similar to mammalian cells involved in storage oil formation. ER-localized GPAT enzyme responsible for plant membrane lipid and oil biosynthesis.","GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 9 (GPAT9)","GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 9 (GPAT9); (ATGPAT9)"]
["AT4G26690","tan","Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development.","SHAVEN 3 (SHV3)","GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE (GDPD) LIKE 3 (GDPDL3);GLYCEROPHOSPHODIESTERASE-LIKE 2 (GPDL2);MUTANT ROOT HAIR 5 (MRH5);SHAVEN 3 (SHV3)"]
["AT4G19200","tan","Glycine and proline rich protein.Mutants have increased size.","GLYCINE AND PROLINE RICH PROTEIN 3 (GPRP3)","GLYCINE AND PROLINE RICH PROTEIN 3 (GPRP3)"]
["AT4G33010","tan","Glycine decarboxylase P-protein 1, catalyzes the degradation of glycine.","GLYCINE DECARBOXYLASE P-PROTEIN 1 (GLDP1)","GLYCINE DECARBOXYLASE P-PROTEIN 1 (AtGLDP1);GLYCINE DECARBOXYLASE P-PROTEIN 1 (GLDP1)"]
["AT2G26080","tan","P-subunit of glycine decarboxylase.The P subunit is the site of glycine binding.","GLYCINE DECARBOXYLASE P-PROTEIN 2 (GLDP2)","GLYCINE DECARBOXYLASE P-PROTEIN 2 (AtGLDP2);GLYCINE DECARBOXYLASE P-PROTEIN 2 (GLDP2)"]
["AT2G21660","tan","Encodes a small glycine-rich RNA binding protein that is part of a negative-feedback loop through which AtGRP7 regulates the circadian oscillations of its own transcript. Gene expression is induced by cold. GRP7 appears to promote stomatal opening and reduce tolerance under salt and dehydration stress conditions, but, promotes stomatal closing and thereby increases stress tolerance under conditions of cold tolerance. Loss of function mutations have increased susceptibility to pathogens suggesting a role in mediating innate immune response. Mutants are also late flowering in a non-photoperiodic manner and are responsive to vernalization suggesting an interaction with the autonomous flowering pathway. There is a reduction of mRNA export from the nucleus in grp7 mutants. GRP7:GFP fusion proteins can be found in the cytosol and nucleus. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase).","COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2 (CCR2)","GLYCINE RICH PROTEIN 7 (ATGRP7);COLD, CIRCADIAN RHYTHM, AND RNA BINDING 2 (CCR2);GLYCINE-RICH RNA-BINDING PROTEIN 7 (GR-RBP7);GLYCINE-RICH RNA-BINDING PROTEIN 7 (GRP7);RNA-BINDING GLYCINE-RICH PROTEIN A3 (RBGA3);SMALL RNA-BINDING PROTEIN 1 (SRBP1)"]
["AT3G14420","tan","Encodes a glycolate oxidase that modulates reactive oxygen species-mediated signal transduction during nonhost resistance. The mRNA is cell-to-cell mobile.","GLYCOLATE OXIDASE 1 (GOX1)","GLYCOLATE OXIDASE 1 (GOX1)"]
["AT4G23560","tan","glycosyl hydrolase 9B15;(source:Araport11)","GLYCOSYL HYDROLASE 9B15 (GH9B15)","GLYCOSYL HYDROLASE 9B15 (GH9B15);GLYCOSYL HYDROLASE 9B15 (AtGH9B15)"]
["AT1G75680","tan","glycosyl hydrolase 9B7;(source:Araport11)","GLYCOSYL HYDROLASE 9B7 (GH9B7)","GLYCOSYL HYDROLASE 9B7 (AtGH9B7);GLYCOSYL HYDROLASE 9B7 (GH9B7)"]
["AT1G08280","tan","Encodes a glycosyltransferase (GT) GALT29A, which belongs to the Carbohydrate Active Enzyme family GT29. GALT29A co-expresses with other arabinogalactan GTs, GALT31A and GLCAT14A. The recombinant GALT29A expressed in Nicotiana benthamiana demonstrated a galactosyltransferase activity, transferring galactose from UDP-galactose to a mixture of various oligosaccharides derived from arabinogalactan proteins.","GLYCOSYLTRANSFERASE 29A (GALT29A)","GLYCOSYLTRANSFERASE 29A (GALT29A)"]
["AT1G32930","tan","Galactosyltransferase family protein;(source:Araport11)","GLYCOSYLTRANSFERASE OF CAZY FAMILY GT31 A (GALT31A)","GLYCOSYLTRANSFERASE OF CAZY FAMILY GT31 A (GALT31A); (ATGALT31A)"]
["AT1G13980","tan","Encodes a GDP/GTP exchange factor for small G-proteins of the ADP ribosylation factor (RAF) class, and as regulator of intracellular trafficking. Homologous to Sec7p and YEC2 from yeast. Involved in the specification of apical-basal pattern formation. Essential for cell division, expansion and adhesion. It appears that heteotypic binding between the DCB and C-terminal domains of two GNOM proteins is required for membrane association, however, GNOM appears to exist predominantly as a heterodimer formed through DCB-DCB interactions. BFA inhibits GNOM trafficking and BFA resistant lines are more resistant to cold stress.","GNOM (GN)","GNOM (GN);VASCULAR NETWORK 7 (VAN7);EMBRYO DEFECTIVE 30 (EMB30);MIZU-KUSSEL2 (MIZ2); (112A-2A); (GNOM)"]
["AT5G39500","tan","Encodes GNOM-LIKE1/ERMO1, a member of ARF-GEF family. Required for endoplasmic reticulum (ER) morphology. The mRNA is cell-to-cell mobile.","GNOM-LIKE 1 (GNL1)","GNOM-LIKE 1 (GNL1);ENDOPLASMIC RETICULUM MORPHOLOGY 1 (ERMO1)"]
["AT5G19980","tan","Encodes a Golgi-localized nucleotide-sugar transporter.","GOLGI NUCLEOTIDE SUGAR TRANSPORTER 4 (GONST4)","GOLGI NUCLEOTIDE SUGAR TRANSPORTER 4 (GONST4);GDP-FUCOSE TRANSPORTER 1 (GFT1)"]
["AT1G64650","tan","Major facilitator superfamily protein;(source:Araport11)","GOLGI S-ADENOSYL METHIONE TRANSPORTER 1 (GOSAMT1)","GOLGI S-ADENOSYL METHIONE TRANSPORTER 1 (GOSAMT1)"]
["AT4G27720","tan","Potential heat-priming associated target of ATAF1.","GOLGI S-ADENOSYL METHIONE TRANSPORTER 2 (GOSAMT2)","GOLGI S-ADENOSYL METHIONE TRANSPORTER 2 (GOSAMT2)"]
["AT2G45200","tan","Encodes a member of the GOS1 (Golgi SNARE) gene family.","GOLGI SNARE 12 (GOS12)","GOLGI SNARE 12 (GOS12)"]
["AT1G50900","tan","Encodes GDC1 (Grana Deficient Chloroplast 1), an ankyrin domain containing protein required fro chloroplast thylakoid grana formation. The mRNA is cell-to-cell mobile.","GRANA DEFICIENT CHLOROPLAST 1 (GDC1)","GRANA DEFICIENT CHLOROPLAST 1 (GDC1);LHCP TRANSLOCATION DEFECT (LTD)"]
["AT1G32900","tan","Glucosyltransferase specifically responsible for elongating amylose polymers.","GRANULE BOUND STARCH SYNTHASE 1 (GBSS1)","GRANULE BOUND STARCH SYNTHASE 1 (GBSS1)"]
["AT4G12720","tan","Encodes a protein with ADP-ribose hydrolase activity. Negatively regulates EDS1-conditioned plant defense and programmed cell death.","(NUDT7)","GROWTH FACTOR GENE 1 (GFG1); (NUDT7);ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 7 (AtNUDT7)"]
["AT4G37740","tan","Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower","GROWTH-REGULATING FACTOR 2 (GRF2)","GROWTH-REGULATING FACTOR 2 (GRF2);GROWTH-REGULATING FACTOR 2 (AtGRF2)"]
["AT2G36400","tan","Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower.","GROWTH-REGULATING FACTOR 3 (GRF3)","GROWTH-REGULATING FACTOR 3 (AtGRF3);GROWTH-REGULATING FACTOR 3 (GRF3)"]
["AT3G52910","tan","Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower.","GROWTH-REGULATING FACTOR 4 (GRF4)","GROWTH-REGULATING FACTOR 4 (GRF4);GROWTH-REGULATING FACTOR 4 (AtGRF4)"]
["AT5G53660","tan","Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in shoot and flower.","GROWTH-REGULATING FACTOR 7 (GRF7)","GROWTH-REGULATING FACTOR 7 (AtGRF7);GROWTH-REGULATING FACTOR 7 (GRF7)"]
["AT1G33240","tan","Encodes a plant transcriptional activator that contains two separate, but similar, trihelix DNA-binding domains, similar to GT-2. Gene is expressed in all aerial parts of the plant, with higher level of expression in siliques. At-GTL2 was thought to be a duplicated copy of this gene but is likely to be a cloning artefact, the result of a chimeric clone. Regulates ploidy-dependent cell growth in trichome.","GT-2-LIKE 1 (GTL1)","GT2-LIKE 1 (AT-GTL1); (ATGTL1);GT-2-LIKE 1 (GTL1);GT2-LIKE 2 (AT-GTL2)"]
["AT1G03830","tan","Assembles liquid?liquid phase separation (LLPS)-driven condensates within the nucleus to protect against infection and autoimmunity. Pseudo-GTPase which sequesters catalytically active GBPL3 under basal conditions but is displaced by GBPL3 LLPS when it enters the nucleus following immune cues to drive the formation of unique membraneless organelles.","GUANYLATE-BINDING PROTEIN-LIKE 1 (GBPL1)","GUANYLATE-BINDING PROTEIN-LIKE 1 (GBPL1)"]
["AT2G38840","tan","Guanylate-binding family protein;(source:Araport11)","GUANYLATE-BINDING PROTEIN-LIKE 2 (GBPL2)","GUANYLATE-BINDING PROTEIN-LIKE 2 (GBPL2)"]
["AT4G20940","tan","Encodes a plasma-membrane localized LRR receptor-like protein involved in both ABA and H202 mediated signaling involved in stomatal movement. TAIR10 annotation for this gene has a low confidence score (2-star). See Comments field for structural annotation by the community.","GUARD CELL HYDROGEN PEROXIDE-RESISTANT 1 (GHR1)","GUARD CELL HYDROGEN PEROXIDE-RESISTANT 1 (GHR1)"]
["AT4G30190","tan","Belongs to the P-type ATPase superfamily of cation-transporting ATPases, pumps protons out of the cell, generating a proton gradient that drives the active transport of nutrients by proton symport. has two autoinhibitory regions within the C-terminal domain. Its plasma membrane localization is light-dependent.","H(+)-ATPASE 2 (HA2)","H(+)-ATPASE 2 (HA2); (ATHA2)"]
["AT5G57350","tan","member of Plasma membrane H+-ATPase family","H(+)-ATPASE 3 (HA3)","H(+)-ATPASE 3 (HA3);ARABIDOPSIS THALIANA ARABIDOPSIS H(+)-ATPASE (ATAHA3);H(+)-ATPASE 3 (AHA3)"]
["AT1G60780","tan","?1 adaptin component of heterotetrameric protein complex that regulates protein sorting at the trans-Golgi network/early endosome. The observed pleiotropic cellular and developmental defects in mutants are primarily due to defects in sorting of targets such as KNOLLE.","HAPLESS 13 (HAP13)","HAPLESS 13 (HAP13);ADAPTOR PROTEIN-1 MU-ADAPTIN 2 (AP1M2)"]
["AT4G21150","tan","ribophorin II (RPN2) family protein;(source:Araport11)","HAPLESS 6 (HAP6)","HAPLESS 6 (HAP6);RIBOPHORIN II (RPN2)"]
["AT4G15802","tan","Encodes a protein with similarity to heat shock factor binding proteins. Involved in negative regulation of heat shock response. Becomes nuclear localized upon heat treatment. Required to restrict meiotic crossovers and repress HEI10 transcription by binding to heat shock factors. Required to maintain DNA methylation at the promoter and 5' untranslational region of HEI10 (PMID: 35670129).","HEAT SHOCK FACTOR BINDING PROTEIN (HSBP)","HEAT SHOCK FACTOR BINDING PROTEIN (HSBP);ARABIDOPSIS THALIANA HEAT SHOCK FACTOR BINDING PROTEIN (AtHSBP);HIGH CROSSOVER RATE2 (HCR2)"]
["AT4G16660","tan","Heat shock protein 70 (Hsp 70) family protein.","HEAT SHOCK PROTEIN 70 (HSP70)","HEAT SHOCK PROTEIN 70 (HSP70); (HSP70-17)"]
["AT1G11660","tan","Member of the heat shock protein 70 family. Mutants show reduced fertility due to defects in sepal cuticular wax composition.","HEAT SHOCK PROTEIN 70-16 (HSP70-16)","HEAT SHOCK PROTEIN 70-16 (HSP70-16)"]
["AT3G09440","tan","Heat shock protein 70 isoform.","HEAT SHOCK PROTEIN 70-3 (HSP70-3)","HEAT SHOCK PROTEIN 70-3 (HSP70-3)"]
["AT3G06130","tan","Heavy metal transport/detoxification superfamily protein;(source:Araport11)","HEAVY METAL ASSOCIATED PROTEIN 25 (ATHMP25)","HEAVY METAL ASSOCIATED PROTEIN 25 (ATHMP25)"]
["AT5G19090","tan","Heavy metal transport/detoxification superfamily protein;(source:Araport11)","HEAVY METAL ASSOCIATED PROTEIN 46 (ATHMP46)","HEAVY METAL ASSOCIATED PROTEIN 46 (ATHMP46)"]
["AT2G26550","tan","Encodes a heme oxygenase-like protein lacking the conserved histidine residue at the active site that is usually involved in heme-iron coordination. It is unable to bind and degrade heme. Mutant analyses suggest a role in photomorphogenesis. The protein can bind the heme precursor, proto IX, which could be biologically significant and point to a role in the regulation of the two tetrapyrrole biosynthetic pathways.","HEME OXYGENASE 2 (HO2)","HEME OXYGENASE 2 (HO2)"]
["AT2G39740","tan","Encodes HESO1 (HEN1 suppressor 1), a terminal nucleotidyl transferase that uridylates miRNAs and siRNAs at 3&#8242; end. HESO1-mediated 3&#8242; uridylation destabilizes small RNAs in hen1.","HEN1 SUPPRESSOR 1 (HESO1)","HEN1 SUPPRESSOR 1 (HESO1)"]
["AT2G24150","tan","heptahelical transmembrane protein HHP3","HEPTAHELICAL PROTEIN 3 (HHP3)","HEPTAHELICAL PROTEIN 3 (HHP3)"]
["AT5G08720","tan","Encodes PIN2 PROMOTER BINDING PROTEIN 1 (PPP1), an evolutionary conserved plant-specific DNA binding protein that acts on transcription of PIN genes. Also named as HCF145. Mutations in HCF145 have reduced level of the tricistronic psaA-psaB-rps (small-subunit ribosomal protein)14 mRNA which encodes for the major subunits of the photosystem I (PSI). HCF145 binds to the 5'UTR of PSAA via a novel TMR domain. It functions to stabilize the PSAA transcript.","(HCF145)","HIGH CHLOROPHYLL FLUORESCENCE 145 (HCF145);PIN2 PROMOTER BINDING PROTEIN 1 (PPP1); (HCF145)"]
["AT3G15095","tan","Encodes HCF243 (high chlorophyll fluorescence), a chloroplast-localized protein involved in the D1 protein stability of the photosystem II complex1.","HIGH CHLOROPHYLL FLUORESCENCE 243 (HCF243)","HIGH CHLOROPHYLL FLUORESCENCE 243 (HCF243)"]
["AT4G35250","tan","HCF244 is a member of the atypical short-chain dehydrogenase/reductase superfamily, a modified group, which has lost enzyme activity.HCF244 interacts with unknown partners in a 200-400 kD membrane associated complex.","HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244 (HCF244)","HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 244 (HCF244)"]
["AT3G17040","tan","It is a RNA tetratricopeptide repeat-containing protein required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. Localizes to the chloroplast membrane. Involved in regulating plastidial gene expression and biogenesis. It binds in the psbT?psbH intercistronic region and blocks the progression of 5&#8242; &#8594; 3&#8242; exoribonucleases, which defines the 5&#8242; end of processed psbH transcripts and also stabilizes the downstream RNA segment. In addition, HCF107 binding remodels the structure of the psbH 5&#8242; UTR in a way that can account for its ability to enhance psbH translation.","HIGH CHLOROPHYLL FLUORESCENT 107 (HCF107)","HIGH CHLOROPHYLL FLUORESCENT 107 (HCF107)"]
["AT1G14900","tan","Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA.","HIGH MOBILITY GROUP A (HMGA)","HIGH MOBILITY GROUP A (HMGA)"]
["AT2G17560","tan","Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha.","HIGH MOBILITY GROUP B4 (HMGB4)","HIGH MOBILITY GROUP B4 (HMGB4);NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR D4 (NFD4); (NFD04)"]
["AT1G71920","tan","Encodes a protein that is believed to act as a histidinol-phosphate transaminase involved in histidine biosynthesis. If the gene encoding the other protein shown to have this function, HISN6A (AT5G10330), is disrupted, a residual level of histidine biosynthesis continues, suggesting that HISN6B can somewhat compensate for the loss of HISN6A.","HISTIDINE BIOSYNTHESIS 6B (HISN6B)","HISTIDINE BIOSYNTHESIS 6B (HISN6B)"]
["AT5G35750","tan","Encodes histidine kinase AHK2.","HISTIDINE KINASE 2 (HK2)","HISTIDINE KINASE 2 (HK2);HISTIDINE KINASE 2 (AHK2)"]
["AT3G56490","tan","Encodes a protein that has adenylylsulfate sulfohydrolase activity (E.C. 3.6.2.1) in vitro.","HIS TRIAD FAMILY PROTEIN 3 (HIT3)","HISTIDINE TRIAD NUCLEOTIDE-BINDING 1 (HINT1);HIS TRIAD FAMILY PROTEIN 3 (HIT3)"]
["AT3G29350","tan","Encodes AHP2, one of the six Arabidopsis thaliana histidine phosphotransfer proteins (AHPs). AHPs function in His-to-Asp phosphorelay signal transduction and as redundant positive regulators of cytokinin signaling. Members of the AHP gene family include: AT3G21510 (AHP1), AT3G29350 (AHP2), AT5G39340 (AHP3), AT3G16360 (AHP4), AT1G03430 (AHP5) and AT1G80100 (AHP6).","HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 2 (AHP2)","HISTIDINE-CONTAINING PHOSPHOTRANSMITTER 2 (AHP2)"]
["AT3G54560","tan","Encodes HTA11, a histone H2A protein. Loss of all H2A.Z (triple mutant with HTA8 and HTA9) results in a reduction in DNA methylation of transposons but not that of genes. Loss of H2A.Z causes misregulation of many genes involved in the response to developmental and environmental cues, and that these genes tend to have high levels of gene-body H2A.Z.","HISTONE H2A 11 (HTA11)","HISTONE H2A 11 (HTA11); (H2A.Z)"]
["AT2G28740","tan","histone 4","HISTONE H4 (HIS4)","HISTONE H4 (HIS4)"]
["AT2G44150","tan","Encodes a protein-lysine N-methyltransferase. Located in ER.","HISTONE-LYSINE N-METHYLTRANSFERASE ASHH3 (ASHH3)","HISTONE-LYSINE N-METHYLTRANSFERASE ASHH3 (ASHH3);SET DOMAIN-CONTAINING PROTEIN 7 (SDG7)"]
["AT3G21820","tan","Histone lysine methyltransferase that promotes the accumulation of histone H3 proteins that are trimethylated on lysine 36 (H3K36me3) during callus formation. It is recruited to LBD promoters via interaction with ARFs.","HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 (ATXR2)","HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 (ATXR2);SET DOMAIN PROTEIN 36 (SDG36)"]
["AT5G15150","tan","homeobox-containing gene with an unusual feature: a leucine zipper motif adjacent to the carboxyl-terminal of the homeodomain structure. This gene is expressed primarily in the cortex of the root and the stem.","HOMEOBOX 3 (HB-3)","HOMEOBOX 3 (ATHB-3);HOMEOBOX 3 (HB-3); (ATHB3);HOMEOBOX FROM ARABIDOPSIS THALIANA 7 (HAT7)"]
["AT4G32980","tan","Encodes transcription factor involved in photomorphogenesis. Regulates gibberellin biosynthesis. Activated by AGAMOUS in a cal-1, ap1-1 background. Expressed at low levels in developing stamens. Increased levels of ATH1 severely delay flowering in the C24 accession. Most remarkably, ectopically expressed ATH1 hardly had an effect on flowering time in the Col-0 and Ler accessions. ATH1 physically interacts with STM, BP and KNAT6 and enhances the shoot apical meristem defect of some of these genes suggesting a role in SAM maintenance. It acts to integrate light and hormone signaling to regulate internode elongation. Nuclear localization is dependent upon interaction with STM.","HOMEOBOX GENE 1 (ATH1)","HOMEOBOX GENE 1 (ATH1)"]
["AT4G40060","tan","Encodes a homeodomain leucine zipper class I (HD-Zip I) protein.","HOMEOBOX PROTEIN 16 (HB16)","HOMEOBOX PROTEIN 16 (ATHB16); (ATHB-16);HOMEOBOX PROTEIN 16 (HB16)"]
["AT1G14440","tan","homeobox protein 31;(source:Araport11)","HOMEOBOX PROTEIN 31 (HB31)","HOMEOBOX PROTEIN 31 (AtHB31);HOMEOBOX PROTEIN 31 (HB31);ZINC FINGER HOMEODOMAIN 4 (ZHD4);FLORAL TRANSITION AT THE MERISTEM2 (FTM2);BRASSINOSTEROID-RELATED HOMEOBOX 2 (BHB2)"]
["AT2G22430","tan","Encodes a homeodomain leucine zipper class I (HD-Zip I) protein that is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis.","HOMEOBOX PROTEIN 6 (HB6)","HOMEOBOX PROTEIN 6 (ATHB6);HOMEOBOX PROTEIN 6 (HB6)"]
["AT3G60390","tan","Encodes homeobox protein HAT3.","HOMEOBOX-LEUCINE ZIPPER PROTEIN 3 (HAT3)","HOMEOBOX-LEUCINE ZIPPER PROTEIN 3 (HAT3)"]
["AT1G17920","tan","Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. Together with HDG11, it is involved in trichome branching.","HOMEODOMAIN GLABROUS 12 (HDG12)","HOMEODOMAIN GLABROUS 12 (HDG12)"]
["AT1G66240","tan","homolog of anti-oxidant 1;(source:Araport11)","HOMOLOG OF ANTI-OXIDANT 1 (ATX1)","HOMOLOG OF ANTI-OXIDANT 1 (ATX1);HEAVY METAL ASSOCIATED PROTEIN 14 (ATHMP14); (ATATX1)"]
["AT2G23670","tan","Phosphorylated protein in the thylakoid lumen.","HOMOLOG OF SYNECHOCYSTIS YCF37 (YCF37)","HOMOLOG OF SYNECHOCYSTIS YCF37 (YCF37)"]
["AT4G30510","tan","yeast autophagy 18 B-like protein;(source:Araport11)","HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) B (ATG18B)","HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) B (G18B);HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) B (ATG18B);ARABIDOPSIS THALIANA HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) B (ATATG18B)"]
["AT1G10030","tan","Encodes a protein that functions as a scaffolding platform for coassembling the sterol C4 demethylation enzyme complex. It also plays an essential role in the maintenance of polar auxin transport (PAT) by restricting the release and accumulation of 4-carboxy-4-methyl-24-methylenecycloartanol (CMMC), a PAT inhibitor.","HOMOLOG OF YEAST ERGOSTEROL28 (ERG28)","HOMOLOG OF YEAST ERGOSTEROL28 (ERG28)"]
["AT1G13330","tan","Encodes the Arabidopsis Hop2 homologue. In other species, Hop2 is proposed to be involved in inter-homolog bias in double strand break repair.","ARABIDOPSIS HOP2 HOMOLOG (AHP2)","HOMOLOGOUS-PAIRING PROTEIN 2 (HOP2);ARABIDOPSIS HOP2 HOMOLOG (AHP2)"]
["AT4G20910","tan","Encodes an enhancer of hua1 and hua2 tha acts to specify reproductive organ identities and to repress A gene function. HEN1 also shares AG's non-homeotic function in controlling floral determinacy. Mutants display corymb-like inflorescences. HEN1 is a methyltransferase that methylates miRNAs and siRNAs on the ribose of the last nucleotide. The 3'-end methylation probably protects the 3' ends of the small RNAs from uridylation.","HUA ENHANCER 1 (HEN1)","HUA ENHANCER 1 (HEN1);CORYMBOSA 2 (CRM2)"]
["AT1G74520","tan","Part of the AtHVA22a family. Protein expression is ABA- and stress-inducible.","HVA22 HOMOLOGUE A (HVA22A)","HVA22 HOMOLOGUE A (ATHVA22A);HVA22 HOMOLOGUE A (HVA22A)"]
["AT1G69700","tan","Part of the AtHVA22 family. Protein expression is ABA- and stress-inducible. The mRNA is cell-to-cell mobile.","HVA22 HOMOLOGUE C (HVA22C)","HVA22 HOMOLOGUE C (HVA22C);HVA22 HOMOLOGUE C (ATHVA22C)"]
["AT2G25300","tan","Encodes a hydroxyproline O-galactosyltransferase.","HYDROXYPROLINE O-GALACTOSYLTRANSFERASE 3 (HPGT3)","HYDROXYPROLINE O-GALACTOSYLTRANSFERASE 3 (HPGT3)"]
["AT3G21760","tan","Encodes HYR1, a UDP glycosyltransferase (UGT). HYR1 glucosylates hypostatin, an inhibitor of cell expansion in vivo to form a bioactive glucoside.","HYPOSTATIN RESISTANCE 1 (HYR1)","HYPOSTATIN RESISTANCE 1 (HYR1)"]
["AT3G03270","tan","HRU1 is a hypoxia induced universal stress protein. It exists as two splice variants with AT3G03270.2 , which contains a putative dimerization domain, the predominant transcript found under anoxia. It is induced by RAP2.12. Subcellular localization is dynamic; under anoxia the localization of HRU1 shifts from cytoplasm to the plasma membrane.","HYPOXIA RESPONSIVE UNIVERSAL STRESS PROTEIN 1 (HRU1)","HYPOXIA RESPONSIVE UNIVERSAL STRESS PROTEIN 1 (HRU1)"]
["AT1G68100","tan","member of IAA-alanine resistance protein 1","IAA-ALANINE RESISTANT 1 (IAR1)","IAA-ALANINE RESISTANT 1 (IAR1)"]
["AT4G37550","tan","Indole-3-acetamide (IAM) hydrolase gene required for the auxin effects of IAM.","IAMHYDROLASE1 (IAMH1)","IAMHYDROLASE1 (IAMH1)"]
["AT2G31580","tan","ICA1 is a nuclear localized member of the tRNA(His) guanylyl transferase superfamily. Loss of function alleles show increased sensitivity to growth at high temperatures defects in cell cycle progression and DNA repair.","ICARUS1 (ICA1)","ICARUS1 (ICA1)"]
["AT4G19540","tan","Encodes a iron-suflur protein required for NADH dehydrogenase.","IRON-SULFUR PROTEIN REQUIRED FOR NADH DEHYDROGENASE (INDH)","IND1(IRON-SULFUR PROTEIN REQUIRED FOR NADH DEHYDROGENASE)-LIKE (INDL);IRON-SULFUR PROTEIN REQUIRED FOR NADH DEHYDROGENASE (INDH)"]
["AT1G68130","tan","Encodes the longer of two splice variants of a transcription factor involved in regulating starch metabolism in response to cold.","INDETERMINATE(ID)-DOMAIN 14 (IDD14)","INDETERMINATE(ID)-DOMAIN 14 (AtIDD14); (IDD14alpha);INDETERMINATE(ID)-DOMAIN 14 (IDD14)"]
["AT4G28640","tan","Auxin induced gene, IAA11 (IAA11). Check the Comments field on the locus page to view updated sequence annotation.","INDOLE-3-ACETIC ACID INDUCIBLE 11 (IAA11)","INDOLE-3-ACETIC ACID INDUCIBLE 11 (IAA11)"]
["AT1G51950","tan","indole-3-acetic acid inducible 18;(source:Araport11)","INDOLE-3-ACETIC ACID INDUCIBLE 18 (IAA18)","INDOLE-3-ACETIC ACID INDUCIBLE 18 (IAA18)"]
["AT5G43700","tan","Auxin inducible protein similar to transcription factors.","AUXIN INDUCIBLE 2-11 (ATAUX2-11)","INDOLE-3-ACETIC ACID INDUCIBLE 4 (IAA4);AUXIN INDUCIBLE 2-11 (ATAUX2-11)"]
["AT3G04730","tan","early auxin-induced (IAA16)","INDOLEACETIC ACID-INDUCED PROTEIN 16 (IAA16)","INDOLEACETIC ACID-INDUCED PROTEIN 16 (IAA16)"]
["AT3G56370","tan","LRR-RLK with distinct polar localization within the plasma membrane in different cell types of the root. Mutants show defects in cell divisions within the root ground tissue.","INFLORESCENCE AND ROOT APICES RECEPTOR KINASE (IRK)","INFLORESCENCE AND ROOT APICES RECEPTOR KINASE (IRK)"]
["AT2G43850","tan","Pseudokinase from the Raf-like MAP3K family and is the only known plant pseudokinase with confirmed protein kinase activity. ILK1 activity promotes disease resistance and molecular pattern-induced root growth inhibition through its stabilization of the HAK5 potassium transporter with the calmodulin-like protein CML9. ILK1 also has a kinase-independent function in salt stress suggesting that it interacts with additional proteins.","INTEGRIN-LINKED KINASE1 (ILK1)","INTEGRIN-LINKED KINASE1 (ILK1)"]
["AT4G10640","tan","Overexpression of IQD16 in transgenic Arabidopsis Pro35:IQD16 lines alters microtubule organization, cell shape, and plant growth. Phenotypes are reminiscent of lng1-1D plants, which overexpress LNG1/TRM2. IQD16 induces elongation of aerial tissues.","IQ-DOMAIN 16 (IQD16)","IQ-DOMAIN 16 (IQD16);ABNORMAL SHOOT 6 (ABS6)"]
["AT4G00820","tan","Member of IQ67 (CaM binding) domain containing family.","IQ-DOMAIN 17 (iqd17)","IQ-DOMAIN 17 (iqd17)"]
["AT1G01110","tan","Member of IQ67 (CaM binding) domain containing family.","IQ-DOMAIN 18 (IQD18)","IQ-DOMAIN 18 (IQD18)"]
["AT4G36890","tan","IRX14 was identified as MUCI64 in a reverse genetic screen for MUCILAGE-RELATED genes. IRX14/MUCI64 is a GT43 protein essential for xylan elongation in seed coat mucilage. The xylan backbone maintains the attachment of mucilage to the seed surface and the distribution of cellulose. It was identified based on its gene expression co-variance with the IRX3 gene involved in secondary cell wall synthesis. A biochemical assay using the irx14 mutant indicates that IRX14 might function in xylose chain elongation.","IRREGULAR XYLEM 14 (IRX14)","IRREGULAR XYLEM 14 (IRX14)"]
["AT2G39930","tan","Encodes an isoamylase-type debranching enzyme. Mutations in this gene cause the loss of detectable isoamylase activity and the disruption of normal starch structure. Mutants have reduced starch content and abnormally structured amylopectins and phytoglycogens. It has been postulated that AtISA1 interacts with AtISA2 to form the Iso1 complex.","ISOAMYLASE 1 (ISA1)","ISOAMYLASE 1 (ISA1);ARABIDOPSIS THALIANA ISOAMYLASE 1 (ATISA1)"]
["AT3G09810","tan","Encodes a catalytic subunit of the mitochondrially-localized NAD+- dependent isocitrate dehydrogenase","ISOCITRATE DEHYDROGENASE VI (IDH-VI)","ISOCITRATE DEHYDROGENASE VI (IDH-VI)"]
["AT5G16440","tan","Encodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway.","ISOPENTENYL DIPHOSPHATE ISOMERASE 1 (IPP1)","ISOPENTENYL DIPHOSPHATE ISOMERASE 1 (IPP1)"]
["AT4G36810","tan","Encodes a protein with geranylgeranyl pyrophosphate synthase activity involved in isoprenoid biosynthesis. The enzyme appears to be targeted to the chloroplast in epidermal cells and guard cells of leaves, and in etioplasts in roots. The mRNA is cell-to-cell mobile.","GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1 (GGPS1)","ISOPRENYL DIPHOSPHATE SYNTHASE11 (IDS11);GERANYL(GERANYL)DIPHOSPHATE SYNTHASE 11 (ATGGPS11); (ATGGPPS11);GERANYLGERANYL PYROPHOSPHATE SYNTHASE 1 (GGPS1);LARGE SUBUNIT OF HETERODIMERIC GERANYL(GERANYL)DIPHOSPHATE SYNTHASE (LSU); (ATLSU);GERANYL(GERANYL)DIPHOSPHATE SYNTHASE 11 (GGPPS11)"]
["AT4G13430","tan","Encodes a methylthioalkylmalate isomerase involved in glucosinolate biosynthesis.","ISOPROPYL MALATE ISOMERASE LARGE SUBUNIT 1 (IIL1)","ISOPROPYL MALATE ISOMERASE LARGE SUBUNIT 1 (IIL1); (ATLEUC1)"]
["AT2G43090","tan","One of three genes encoding the small subunit of isopropylmalate isomerase, a heterodimer consisting of a large and a small subunit. A function in both leucine biosynthesis and the first cycle of Met chain elongation has been demonstrated for this subunit. The mRNA is cell-to-cell mobile.","ISOPROPYLMALATE ISOMERASE SMALL SUBUNIT 1 (IPMI SSU1)","ISOPROPYLMALATE ISOMERASE SMALL SUBUNIT 1 (IPMI SSU1)"]
["AT4G00990","tan","jJumonji-domain-containing H3K9 histone demethylase. Loss of function mutants are susceptible to bacterial infection and early flowering.","JMJC DOMAIN-CONTAINING PROTEIN 27 (JMJ27)","JMJC DOMAIN-CONTAINING PROTEIN 27 (JMJ27); (ATJMJ17)"]
["AT5G25490","tan","Encodes an RNA-binding protein having three Ranbp2-type zinc fingers, involved in negative regulation of phloem development via translational suppression of SMXL4/5.","JULGI2 (JUL2)","JULGI2 (JUL2)"]
["AT4G00630","tan","Encodes a K(+)/H(+) antiporter that modulates monovalent cation and pH homeostasis in plant chloroplasts or plastids.","K+ EFFLUX ANTIPORTER 2 (KEA2)","K+ EFFLUX ANTIPORTER 2 (KEA2)"]
["AT5G51710","tan","member of Putative potassium proton antiporter family","K+ EFFLUX ANTIPORTER 5 (KEA5)","K+ EFFLUX ANTIPORTER 5 (KEA5);ARABIDOPSIS THALIANA K+ EFFLUX ANTIPORTER 5 (ATKEA5)"]
["AT5G11800","tan","member of Putative potassium proton antiporter family","K+ EFFLUX ANTIPORTER 6 (KEA6)","K+ EFFLUX ANTIPORTER 6 (KEA6);ARABIDOPSIS THALIANA K+ EFFLUX ANTIPORTER 6 (ATKEA6)"]
["AT4G33530","tan","potassium transporter","K+ UPTAKE PERMEASE 5 (KUP5)","K+ UPTAKE PERMEASE 5 (KUP5)"]
["AT4G37470","tan","HTL belonging to the alpha/beta fold hydrolase superfamily. Mutant and over-expression studies indicates its involvement in seedling de-etiolation process. Involved in the perception of karrikins. Interacts with MAX2 and together targets SMAX1 for polyubiquitination and degradation. Important for cotyledon expansion.","KARRIKIN INSENSITIVE 2 (KAI2)","KARRIKIN INSENSITIVE 2 (KAI2)"]
["AT5G08390","tan","One of four katanin p80 subunits. Involved in targeting of katanin complex to crossover and branch points to properly sever microtubules.","KATANIN P80 SUBUNIT 3 (KTN80.3)","KATANIN P80 SUBUNIT 3 (KTN80.3)"]
["AT1G23390","tan","A kelch domain-containing F-box protein. Its N terminus contains a typical F-box motif but its C-terminal domain only consists of one predicted kelch motif. Predicted to be stu Interacts with chalcone synthase CHS to mediate CHS ubiquitination and degradation.","KELCH DOMAIN-CONTAINING F-BOX PROTEIN (KFB)","KELCH DOMAIN-CONTAINING F-BOX PROTEIN (KFB)"]
["AT1G05360","tan","KMS2 encode a endoplasmic reticulum protein involved in the early secretory pathway.","KILLING ME SLOWLY 2 (KMS2)","KILLING ME SLOWLY 2 (KMS2)"]
["AT5G58300","tan","Atypical LRR-receptor-kinase with polarized localization to lateral pericycle facing wall at the inner PM domain that functions in root cell proliferation.","KINASE ON THE INSIDE (KOIN)","KINASE ON THE INSIDE (KOIN)"]
["AT1G21730","tan","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","KINESIN 7.1 (KIN7.1)","KINESIN 7.1 (KIN7.1)"]
["AT2G21380","tan","Kinesin motor family protein;(source:Araport11)","KINESIN 7.2 (KIN7.2)","KINESIN 7.2 (KIN7.2)"]
["AT4G39050","tan","Kinesin motor family protein;(source:Araport11)","KINESIN 7.4 (KIN7.4)","KINESIN 7.4 (KIN7.4)"]
["AT5G06670","tan","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","KINESIN 7.5 (KIN7.5)","KINESIN 7.5 (KIN7.5)"]
["AT5G10470","tan","Kinesin that binds cyclin-dependent kinase CDKA;1 as homodimer or as heterodimer with KCA2. Demarcates the division site in plant cells.","KINESIN LIKE PROTEIN FOR ACTIN BASED CHLOROPLAST MOVEMENT 1 (KAC1)","KINESIN LIKE PROTEIN FOR ACTIN BASED CHLOROPLAST MOVEMENT 1 (KAC1)"]
["AT5G25220","tan","A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia","KNOTTED1-LIKE HOMEOBOX GENE 3 (KNAT3)","KNOTTED1-LIKE HOMEOBOX GENE 3 (KNAT3)"]
["AT2G04650","tan","KONJAC2 is imilar to sugar pyrophosphorylases but has an insertion of 2 AA in the pyrophosphorylase consensus motif that is highly conserved in GMPPs. KONJAC2 does not display GDP-mannose pyrophosphorylase activity. It can simulate GDP-mannose pyrophosphorylase activity of VTC1.","KONJAC 2 (KJC2)","KONJAC 2 (KJC2)"]
["AT5G07130","tan","putative laccase, a member of laccase family of genes (17 members in Arabidopsis).","LACCASE 13 (LAC13)","LACCASE 13 (LAC13)"]
["AT5G01040","tan","putative laccase, knockout mutant showed early flowering. FLAIL-mediated splicing of LAC8 promotes its mRNA expression and represses flowering.","LACCASE 8 (LAC8)","LACCASE 8 (LAC8)"]
["AT1G01060","tan","LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1","LATE ELONGATED HYPOCOTYL (LHY)","LATE ELONGATED HYPOCOTYL 1 (LHY1);LATE ELONGATED HYPOCOTYL (LHY)"]
["AT2G44060","tan","Late embryogenesis abundant protein, group 2;(source:Araport11)","LATE EMBRYOGENESIS ABUNDANT 26 (LEA26)","LATE EMBRYOGENESIS ABUNDANT 26 (LEA26)"]
["AT1G27340","tan","Encodes a putative F-box protein that is involved in the regulation of leaf morphology.","LEAF CURLING RESPONSIVENESS (LCR)","LEAF CURLING RESPONSIVENESS (LCR)"]
["AT5G66190","tan","Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the thylakoid. The affinity of this enzyme for ferredoxin is slightly, but significantly, higher than AtLFNR2, an isoform of the same enzyme. AtLFNR1 forms a heterodimer with AtFNR2 and is also a prerequisite to attach AtFNR2 to the thylakoid membrane.","FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1 (FNR1)","LEAF FNR 1 (ATLFNR1);LEAF-TYPE CHLOROPLAST-TARGETED FNR 1 (LFNR1);FERREDOXIN-NADP(+)-OXIDOREDUCTASE 1 (FNR1)"]
["AT1G20020","tan","Encodes a leaf-type ferredoxin:NADP(H) oxidoreductase. It is present in both chloroplast stroma and thylakoid membranes but is more abundant in the stroma The mRNA is cell-to-cell mobile.","FERREDOXIN-NADP(+)-OXIDOREDUCTASE 2 (FNR2)","LEAF FNR 2 (ATLFNR2);LEAF-TYPE CHLOROPLAST-TARGETED FNR 2 (LFNR2);FERREDOXIN-NADP(+)-OXIDOREDUCTASE 2 (FNR2)"]
["AT1G25390","tan","Protein kinase superfamily protein;(source:Araport11)","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR- LIKE PROTEIN KINASE-LIKE 4 (LRK10L4)","LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR- LIKE PROTEIN KINASE-LIKE 4 (LRK10L4)"]
["AT5G16590","tan","Encodes a membrane localized receptor kinase that may function as a coreceptor to regulate transmembrane transporters.","LEUCINE RICH REPEAT PROTEIN 1 (LRR1)","LEUCINE RICH REPEAT PROTEIN 1 (LRR1);QIAN SHOU KINASE 2 (QSK2); (LRR1)"]
["AT4G18670","tan","Leucine rich extensin protein involved in cell wall biogenesis and organization. Interacts with several members of the RALF family of ligand peptides.","LEUCINE-RICH REPEAT EXTENSIN 5 (LRX5)","LEUCINE-RICH REPEAT EXTENSIN 5 (LRX5)"]
["AT4G10340","tan","photosystem II encoding the light-harvesting chlorophyll a/b binding protein CP26 of the antenna system of the photosynthetic apparatus The mRNA is cell-to-cell mobile.","LIGHT HARVESTING COMPLEX OF PHOTOSYSTEM II 5 (LHCB5)","LIGHT HARVESTING COMPLEX OF PHOTOSYSTEM II 5 (LHCB5);CHLOROPHYLL PROTEIN 26 (CP26)"]
["AT3G08940","tan","Lhcb4.2 protein (Lhcb4.2, protein involved in the light harvesting complex of photosystem II The mRNA is cell-to-cell mobile.","LIGHT HARVESTING COMPLEX PHOTOSYSTEM II (LHCB4.2)","LIGHT HARVESTING COMPLEX PHOTOSYSTEM II (LHCB4.2)"]
["AT1G15820","tan","Lhcb6 protein (Lhcb6), light harvesting complex of photosystem II.","LIGHT HARVESTING COMPLEX PHOTOSYSTEM II SUBUNIT 6 (LHCB6)","LIGHT HARVESTING COMPLEX PHOTOSYSTEM II SUBUNIT 6 (LHCB6); (CP24)"]
["AT2G05070","tan","Encodes Lhcb2.2. Belongs to the Lhc super-gene family encodes the light-harvesting chlorophyll a/b-binding (LHC) proteins that constitute the antenna system of the photosynthetic apparatus.","PHOTOSYSTEM II LIGHT HARVESTING COMPLEX GENE 2.2 (LHCB2.2)","LIGHT-HARVESTING CHLOROPHYLL B-BINDING 2 (LHCB2);PHOTOSYSTEM II LIGHT HARVESTING COMPLEX GENE 2.2 (LHCB2.2)"]
["AT3G47470","tan","Encodes a chlorophyll a/b-binding protein that is more similar to the PSI Cab proteins than the PSII cab proteins. The predicted protein is about 20 amino acids shorter than most known Cab proteins.","LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX I SUBUNIT A4 (LHCA4)","LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX I SUBUNIT A4 (LHCA4); (CAB4)"]
["AT2G34430","tan","Photosystem II type I chlorophyll a/b-binding protein The mRNA is cell-to-cell mobile.","LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX II SUBUNIT B1 (LHB1B1)","LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX II SUBUNIT B1 (LHCB1.4); (DEG11);LIGHT-HARVESTING CHLOROPHYLL-PROTEIN COMPLEX II SUBUNIT B1 (LHB1B1)"]
["AT5G19740","tan","LAMP is an AMP paralog that overlaps in expression within the vascular system. Along with LAMP it suppresses meristem activity within the peripheral zone of the shoot apical meristem. LAMP is localized to the endoplasmic reticulum.","LIKE AMP 1 (LAMP1)","LIKE AMP 1 (LAMP1)"]
["AT2G21050","tan","Encodes LAX2 (LIKE AUXIN RESISTANT), a member of the AUX1 LAX family of auxin influx carriers. Required for the establishment of embryonic root cell organization.","LIKE AUXIN RESISTANT 2 (LAX2)","LIKE AUXIN RESISTANT 2 (LAX2)"]
["AT3G10940","tan","Encodes a protein with a predicted dual-specificity phosphatase domain, similar to the glucan phosphorylases SEX4 and LSF1, however, it lacks the carbohydrate binding domain present in those proteins. Has phosphoglucan phosphatase activity. It binds to starch and specifically hydrolyzes phosphate from the C3-position.","LIKE SEX4 2 (LSF2)","LIKE SEX4 2 (LSF2)"]
["AT3G51600","tan","Predicted to encode a PR (pathogenesis-related) protein. Belongs to the lipid transfer protein (PR-14) family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.","LIPID TRANSFER PROTEIN 5 (LTP5)","LIPID TRANSFER PROTEIN 5 (LTP5)"]
["AT3G25540","tan","Encodes a ceramide synthase that together with LOH3 is essential for production of ceramides containing Very Long Chain Fatty acid VLCFA-Ceramides(mainly C 22 to 26).","LAG ONE HOMOLOGUE 1 (LOH1)","LONGEVITY ASSURANCE GENE 1 (LAG1);LAG ONE HOMOLOGUE 1 (LOH1);LAG ONE HOMOLOGUE 1 (LAG1)"]
["AT3G02170","tan","Encodes LONGIFOLIA2 (LNG2). Regulates leaf morphology by promoting cell expansion in the leaf-length direction. The LNG2 homologue LNG1 (At5g15580) has similar function.","LONGIFOLIA2 (LNG2)","LONGIFOLIA2 (LNG2);TON1 RECRUITING MOTIF 1 (TRM1)"]
["AT1G15370","tan","TPLATE adaptor complex subunit.","LONGIN-LIKE PROTEIN INTERACTING WITH TPLATE ADAPTOR (LOLITA)","LONGIN-LIKE PROTEIN INTERACTING WITH TPLATE ADAPTOR (LOLITA)"]
["AT5G50150","tan","LOTR1 protein has an unknown function. It contains both DUF4409 and DUF239 domains. Loss of function mutations show defects in formation of the Casparian band- which is correlated with mis localization of CASP1.","LORD OF THE RINGS 1 (LOTR1)","LORD OF THE RINGS 1 (LOTR1)"]
["AT2G37630","tan","Encodes a MYB-domain protein involved in specification of the leaf proximodistal axis. Mutation results in lobed and dissected leaves with a characteristic asymmetry. Homologous to the Antirrhinum PHANTASTICA (PHAN) and maize ROUGH SHEATH2 (RS2) genes Asymmetric placement of auxin response at the distal leaf tip precedes visible asymmetric leaf growth. Acts alongside AXR1 to exclude BP expression in leaves and with PIN1 to repress BP and promote lateral organ growth. Interacts physically with AS2 to form a complex that binds to the BP promoter and silences BP. Also functions as a regulator of the plant immune response.","ASYMMETRIC LEAVES 1 (AS1)","LOTUS LEAF 2 (LL2);MYB DOMAIN PROTEIN 91 (MYB91);MYB DOMAIN PROTEIN 91 (ATMYB91);ASYMMETRIC LEAVES 1 (AS1);ARABIDOPSIS PHANTASTICA-LIKE 1 (ATPHAN); (LL2)"]
["AT2G36530","tan","Involved in light-dependent cold tolerance and encodes an enolase. Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. Affects seed size and weight by adjusting cytokinin content and forming ENO2-bZIP75 complex. The los2 mutant has an autoimmune response through a perturbation of glycolysis from the reduction of the enolase activity results in activation of NLR-involved immune responses which further influences primary metabolism and plant growth.","LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2 (LOS2)","LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 2 (LOS2);CYTOSOLIC ENOLASE (ENOC);ENOLASE 2 (ENO2)"]
["AT5G48910","tan","Encodes LPA66, a chloroplast protein of the pentatricopeptide repeat family. In lpa66 mutants, editing of psbF that converts serine to phenylalanine is specifically impaired. lpa66 mutants also display a high chlorophyll fluorescence phenotype.","LOW PSII ACCUMULATION 66 (LPA66)","LOW PSII ACCUMULATION 66 (LPA66)"]
["AT2G02130","tan","Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. The mRNA is cell-to-cell mobile.","LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 68 (LCR68)","LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 68 (LCR68); (PDF2.3)"]
["AT2G02100","tan","Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2. The mRNA is cell-to-cell mobile.","LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69 (LCR69)","LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69 (LCR69); (PDF2.2)"]
["AT1G62830","tan","Encodes a homolog of human Lysine-Specific Demethylase1. Involved in H3K4 methylation of target genes including the flowering time loci FLC and FWA. Located in nucleus. Negatively regulates root elongation. Involved in repression of LRP1 via histone deacetylation.","LSD1-LIKE 1 (LDL1)","LSD1-LIKE 1 (LDL1); (SWP1); (ATSWP1);ARABIDOPSIS LYSINE-SPECIFIC HISTONE DEMETHYLASE (ATLSD1);LYSINE-SPECIFIC HISTONE DEMETHYLASE (LSD1);LYSINESPECIFIC HISTONE DEMETHYLASE 1C (KDM1C)"]
["AT3G53130","tan","Lutein-deficient 1 (LUT1) required for lutein biosynthesis, member of the xanthophyll class of carotenoids. Involved in epsilon ring hydroxylation. Maps at 67.3 cM on chromosome 3.","LUTEIN DEFICIENT 1 (LUT1)","LUTEIN DEFICIENT 1 (LUT1);CYTOCHROME P450 97C1 (CYP97C1)"]
["AT1G21880","tan","Encodes a lysin-motif protein mediating bacterial peptidoglycan sensing and immunity to bacterial infection. Induction of chitin-responsive genes by chitin treatment is not blocked in the mutant. It contains a C-terminal GPI anchor signal and is an ortholog of OsLYP4 and OsLYP6. Phosphatidylinositol 4-phosphate 5-kinase (PIP5K) enzyme family member.","LYSM-CONTAINING RECEPTOR PROTEIN 2 (LYP2)","LYSM DOMAIN GPI-ANCHORED PROTEIN 1 PRECURSOR (LYM1);LYSM-CONTAINING RECEPTOR PROTEIN 2 (LYP2)"]
["AT3G14840","tan","Encodes LRR-RLK protein that is localized to the plasma membrane and is involved in regulation of plant innate immunity to microbes. LIK1 is phosphorylated by CERK1, a kinase involved in chitin perception. The mRNA is cell-to-cell mobile.","LYSM RLK1-INTERACTING KINASE 1 (LIK1)","LYSM RLK1-INTERACTING KINASE 1 (LIK1)"]
["AT2G45670","tan","Encodes an acyl-CoA: lysophosphatidylethanolamine acyltransferase with 20:0-CoA being the best acyl donor. Mutations adversely affect the growth of plants and result in decreased lipid content in roots and seeds.","LYSOPHOSPHATIDYLETHANOLAMINE ACYLTRANSFERASE2 (LPEAT2)","LYSOPHOSPHATIDYLETHANOLAMINE ACYLTRANSFERASE2 (LPEAT2); (ATLPEAT2)"]
["AT2G42700","tan","Member of MAG2 complex on the ER that is responsible for efficient transport of seed storage proteins, functions in protein transport between the ER and Golgi apparatus Sec1 domain, involved in the development of vegetative organs. Required for proper maturation of seed storage proteins.","MAG2-INTERACTING PROTEIN 3 (MIP3)","MAG2-INTERACTING PROTEIN 3 (MIP3); (SLOH4)"]
["AT3G13070","tan","Together with MRG9 serves as Mg2+ transporter responsible for chloroplast Mg2+ update.","MAGNESIUM RELEASE 8 (MRG8)","MAGNESIUM RELEASE 8 (MRG8)"]
["AT4G02530","tan","MPH2 is a green lineage-specific thylakoid lumen protein required for photosynthetic acclimation of PSII to stressful light conditions (PMID:28874535).","MAINTENANCE OF PHOTOSYSTEM II UNDER HIGH LIGHT 2 (MPH2)","MAINTENANCE OF PHOTOSYSTEM II UNDER HIGH LIGHT 2 (MPH2)"]
["AT3G47520","tan","Encodes a protein with NAD-dependent malate dehydrogenase activity, located in chloroplasts. The mRNA is cell-to-cell mobile.","MALATE DEHYDROGENASE (MDH)","MALATE DEHYDROGENASE (MDH);PLASTIDIC NAD-DEPENDENT MALATE DEHYDROGENASE (pNAD-MDH)"]
["AT1G08660","tan","Encodes a sialyltransferase-like protein that is localized to the Golgi apparatus and is involved in pollen tube growth and pollen germination.","MALE GAMETOPHYTE DEFECTIVE 2 (MGP2)","MALE GAMETOPHYTE DEFECTIVE 2 (MGP2);SIALYLTRANSFERASE-LIKE 1 (SIA1)"]
["AT3G10920","tan","manganese superoxide dismutase (MSD1)","MANGANESE SUPEROXIDE DISMUTASE 1 (MSD1)","MANGANESE SUPEROXIDE DISMUTASE 1 (MSD1);MATERNAL EFFECT EMBRYO ARREST 33 (MEE33);ARABIDOPSIS MANGANESE SUPEROXIDE DISMUTASE 1 (ATMSD1);SUPEROXIDE DISMUTASE 1 (ATSOD1)"]
["AT4G01370","tan","Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization. Required for male-specific meiotic cytokinesis. The mRNA is cell-to-cell mobile.","MAP KINASE 4 (MPK4)","MAP KINASE 4 (ATMPK4);MAP KINASE 4 (MPK4); (MAPK4)"]
["AT1G04630","tan","GRIM-19 protein;(source:Araport11)","MATERNAL EFFECT EMBRYO ARREST 4 (MEE4)","MATERNAL EFFECT EMBRYO ARREST 4 (MEE4)"]
["AT4G00950","tan","hypothetical protein (DUF688);(source:Araport11)","MATERNAL EFFECT EMBRYO ARREST 47 (MEE47)","MATERNAL EFFECT EMBRYO ARREST 47 (MEE47)"]
["AT1G60870","tan","maternal effect embryo arrest 9;(source:Araport11)","MATERNAL EFFECT EMBRYO ARREST 9 (MEE9)","MATERNAL EFFECT EMBRYO ARREST 9 (MEE9)"]
["AT1G78610","tan","mechanosensitive channel of small conductance-like 6;(source:Araport11)","MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 6 (MSL6)","MECHANOSENSITIVE CHANNEL OF SMALL CONDUCTANCE-LIKE 6 (MSL6)"]
["AT5G45420","tan","The gene encodes a MYB transcription factor belons to R2R3-MYB family of transcription factors. Knock-down mutant analysis indicates its role in root hair elongation.","MEMBRANE ANCHORED MYB (maMYB)","MEMBRANE ANCHORED MYB (maMYB)"]
["AT3G01050","tan","membrane-anchored ubiquitin-fold protein 1 precursor;(source:Araport11)","MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 PRECURSOR (MUB1)","MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 1 PRECURSOR (MUB1)"]
["AT3G26980","tan","membrane-anchored ubiquitin-fold protein 4 precursor;(source:Araport11)","MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 PRECURSOR (MUB4)","MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 PRECURSOR (MUB4)"]
["AT5G26230","tan","Encodes a member of the MAKR (MEMBRANE-ASSOCIATED KINASE REGULATOR) gene family. MAKRs have putative kinase interacting motifs and membrane localization signals. Known members include: AT5G26230 (MAKR1), AT1G64080 (MAKR2), AT2G37380 (MAKR3), AT2G39370 (MAKR4), AT5G52870 (MAKR5) and AT5G52900 (MAKR6).","MEMBRANE-ASSOCIATED KINASE REGULATOR 1 (MAKR1)","MEMBRANE-ASSOCIATED KINASE REGULATOR 1 (MAKR1)"]
["AT4G14965","tan","membrane-associated progesterone binding protein 4;(source:Araport11)","MEMBRANE-ASSOCIATED PROGESTERONE BINDING PROTEIN 4 (MAPR4)","MEMBRANE-ASSOCIATED PROGESTERONE BINDING PROTEIN 4 (MAPR4);MEMBRANE-ASSOCIATED PROGESTERONE BINDING PROTEIN 4 (AtMAPR4)"]
["AT3G08880","tan","Encodes a kinetochore hub-protein that is required for chromosome segregation to ensure proper cell division and the maintenance of plant architecture.","MERISTEMS UNSTRUCTURED (MUN)","MERISTEMS UNSTRUCTURED (MUN); (MUN1)"]
["AT1G79340","tan","Encodes MCP2d, the predominant and constitutively expressed member of type II metacaspases (MCPs). MCP2d plays a positive regulatory role in biotic and abiotic stress-induced programmed cell death (PCD). Arabidopsis contains three type I MCP genes (MCP1a-c) and six type II MCP genes (MCP2a?f): AtMCP1a/At5g64240, AtMCP1b/At1g02170, AtMCP1c/At4g25110, AtMCP2a/At1g79310, AtMCP2b/At1g79330, AtMCP2c/At1g79320, AtMCP2d/At1g79340, AtMCP2e/At1g16420, AtMCP2f/At5g04200. The mRNA is cell-to-cell mobile.","METACASPASE 4 (MC4)","METACASPASE 4 (MCA4);METACASPASE 4 (AtMC4);METACASPASE 4 (MC4);METACASPASE 2D (MCP2d);METACASPASE 2D (AtMCP2d)"]
["AT4G37040","tan","encodes a methionine aminopeptidase","METHIONINE AMINOPEPTIDASE 1D (MAP1D)","METHIONINE AMINOPEPTIDASE 1D (MAP1D)"]
["AT3G01120","tan","encodes a cystathionine gamma-synthase, which performs the first committed step in methionine biosynthesis. A conserved motif of 13 amino acids in the first exon is required for posttranscriptional autoregulation. This enzyme shares the same substrate as threonine synthase (TS) and its absence transcriptionally affects 8 genes in the genome.","METHIONINE OVERACCUMULATION 1 (MTO1)","METHIONINE OVERACCUMULATION 1 (MTO1);CYSTATHIONINE GAMMA-SYNTHASE (CGS);A. THALIANA CYSTATHIONINE GAMMA-SYNTHETASE 1 (AtCYS1);CYSTATHIONINE GAMMA-SYNTHASE 1 (CGS1); (AtCGS1)"]
["AT3G17390","tan","S-adenosylmethionine synthetase","METHIONINE OVER-ACCUMULATOR 3 (MTO3)","METHIONINE OVER-ACCUMULATOR 3 (MTO3);S-ADENOSYLMETHIONINE SYNTHETASE 3 (SAMS3);METHIONINE ADENOSYLTRANSFERASE 4 (MAT4); (ATSAMS3)"]
["AT5G49810","tan","Arabidopsis thaliana methionine S-methyltransferase, an enzyme that catalyzes S -methylmethionine formation. The mRNA is cell-to-cell mobile.","METHIONINE S-METHYLTRANSFERASE (MMT)","METHIONINE S-METHYLTRANSFERASE (MMT)"]
["AT2G18030","tan","Peptide methionine sulfoxide reductase family protein;(source:Araport11)","METHIONINE SULFOXIDE REDUCTASE A5 (MSRA5)","METHIONINE SULFOXIDE REDUCTASE A5 (MSRA5)"]
["AT3G03780","tan","Encodes a cytosolic methionine synthase, involved in methionine regeneration via the activated methyl cycle (or SAM cycle)","METHIONINE SYNTHASE 2 (MS2)","METHIONINE SYNTHASE 2 (ATMS2);METHIONINE SYNTHASE 2 (MS2)"]
["AT3G63030","tan","Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.","METHYL-CPG-BINDING DOMAIN 4 (MBD4)","METHYL-CPG-BINDING DOMAIN 4 (MBD4)"]
["AT3G46580","tan","Protein containing a putative methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.","METHYL-CPG-BINDING DOMAIN PROTEIN 5 (MBD5)","METHYL-CPG-BINDING DOMAIN PROTEIN 05 (MBD05);METHYL-CPG-BINDING DOMAIN PROTEIN 5 (MBD5); (ATMBD5)"]
["AT3G02790","tan","zinc finger (C2H2 type) family protein;(source:Araport11)","METHYLENE BLUE SENSITIVITY 1 (MBS1)","METHYLENE BLUE SENSITIVITY 1 (MBS1)"]
["AT3G59970","tan","methylenetetrahydrofolate reductase MTHFR1 mRNA, complete","METHYLENETETRAHYDROFOLATE REDUCTASE 1 (MTHFR1)","METHYLENETETRAHYDROFOLATE REDUCTASE 1 (MTHFR1)"]
["AT2G44160","tan","methylenetetrahydrofolate reductase MTHFR2 mRNA, complete The mRNA is cell-to-cell mobile.","METHYLENETETRAHYDROFOLATE REDUCTASE 2 (MTHFR2)","METHYLENETETRAHYDROFOLATE REDUCTASE 2 (MTHFR2)"]
["AT2G38700","tan","Encodes mevalonate diphosphate decarboxylase, the enzyme that catalyzes the synthesis of isopentenyl diphosphate, used in sterol and isoprenoid biosynthesis. The protein appears to form a homodimeric complex. Incidentally, it was shown that the Arabidopsis MVD protein could also interact with its yeast homolog to form a heterodimer.","MEVALONATE DIPHOSPHATE DECARBOXYLASE 1 (MVD1)","MEVALONATE DIPHOSPHATE DECARBOXYLASE 1 (MVD1); (ATMDD1);MEVALONATE 5-DIPHOSPHATE DECARBOXYLASE 1 (MDD1); (ATMVD1)"]
["AT5G27450","tan","Encodes a protein with mevalonate kinase activity involved in the mevalonate pathway.","MEVALONATE KINASE (MK)","MEVALONATE KINASE (MK);MEVALONATE KINASE (MVK)"]
["AT5G08120","tan","Microtubule-associated and viral movement protein binding protein. Negatively regulates KN1 association to plasmodesmata and, consequently, cell-to-cell transport. Involved in the alignment of cortical microtubules, the patterning of stomata and in restricting tobamoviral infections.","MOVEMENT PROTEIN BINDING PROTEIN 2C (MPB2C)","MICROTUBULE BINDING PROTEIN 2C (MBP2C);MOVEMENT PROTEIN BINDING PROTEIN 2C (MPB2C); (ATMBP2C)"]
["AT4G26760","tan","microtubule-associated protein 65-2;(source:Araport11)","MICROTUBULE-ASSOCIATED PROTEIN 65-2 (MAP65-2)","MICROTUBULE-ASSOCIATED PROTEIN 65-2 (MAP65-2)"]
["AT1G14690","tan","microtubule-associated protein 65-7;(source:Araport11)","MICROTUBULE-ASSOCIATED PROTEIN 65-7 (MAP65-7)","MICROTUBULE-ASSOCIATED PROTEIN 65-7 (MAP65-7)"]
["AT5G55230","tan","Binds and bundles microtubules. Plays a role in stabilizing anti-parallel microtubules in the central spindle at anaphase to early cytokinesis but is not essential at the midline of the phragmoplast at later stages. The timing with which the MAP65-1 was targeted to the spindle appears to be regulated by a phosphorylation sensitive switch. Enhances microtubule polymerization, promotes nucleation and stabilizes microtubules against cold treatment and dilution.","MICROTUBULE-ASSOCIATED PROTEINS 65-1 (MAP65-1)","MICROTUBULE-ASSOCIATED PROTEINS 65-1 (MAP65-1)"]
["AT2G17480","tan","A member of a large family of seven-transmembrane domain proteins specific to plants, homologs of the barley mildew resistance locus o (MLO) protein. The Arabidopsis genome contains 15 genes encoding MLO proteins, with localization in plasma membrane. Phylogenetic analysis revealed four clades of closely-related AtMLO genes. ATMLO8 belongs to the clade III, with AtMLO5, AtMLO7, AtMLO9, and AtMLO10. The gene is expressed during seedling growth, in cotyledons and hypocotyl, and in fruit abscission zone, as shown by GUS activity patterns. The expression of several phylogenetically closely-related AtMLO genes showed similar or overlapping tissue specificity and analogous responsiveness to external stimuli, suggesting functional redundancy, co-function, or antagonistic function(s).","MILDEW RESISTANCE LOCUS O 8 (MLO8)","MILDEW RESISTANCE LOCUS O 8 (MLO8);MILDEW RESISTANCE LOCUS O 8 (ATMLO8)"]
["AT1G57610","tan","calcium uniporter (DUF607);(source:Araport11)","MITOCHONDRIAL CALCIUM UPTAKE2 (MCU2)","MITOCHONDRIAL CALCIUM UPTAKE2 (MCU2)"]
["AT3G07480","tan","Forms an accessory complex I subunit that is part of the bridge domain, which connects the membrane and the peripheral arm of mitochondrial complex I.","MITOCHONDRIAL COMPLEX I FERREDOXIN (C1-FDX)","MITOCHONDRIAL COMPLEX I FERREDOXIN (C1-FDX)"]
["AT1G53240","tan","mMDH1 encodes a mitochrondrial malate dehydrogenase. It is expressed at higher levels than the other mitochrondrial isoform mMDH2 (At3G15020) according to transcript and proteomic analyses.","MITOCHONDRIAL MALATE DEHYDROGENASE 1 (mMDH1)","MITOCHONDRIAL MALATE DEHYDROGENASE 1 (mMDH1)"]
["AT3G15020","tan","mMDH2 encodes a mitochrondrial malate dehydrogenase.Expressed at a lower level than mMDH1.","MITOCHONDRIAL MALATE DEHYDROGENASE 2 (mMDH2)","MITOCHONDRIAL MALATE DEHYDROGENASE 2 (mMDH2)"]
["AT4G22310","tan","Uncharacterized protein family (UPF0041);(source:Araport11)","MITOCHONDRIAL PYRUVATE CARRIER 3 (MPC3)","MITOCHONDRIAL PYRUVATE CARRIER 3 (MPC3)"]
["AT3G13930","tan","Encodes a subunit of the mitochondrial pyruvate dehydrogenase complex.","MITOCHONDRIAL PYRUVATE DEHYDROGENASE SUBUNIT 2-2 (MTE2-2)","MITOCHONDRIAL PYRUVATE DEHYDROGENASE SUBUNIT 2-2 (MTE2-2)"]
["AT1G59580","tan","encodes a mitogen-activated kinase involved in innate immunity The mRNA is cell-to-cell mobile.","MITOGEN-ACTIVATED PROTEIN KINASE HOMOLOG 2 (MPK2)","MITOGEN-ACTIVATED PROTEIN KINASE HOMOLOG 2 (ATMPK2);MITOGEN-ACTIVATED PROTEIN KINASE HOMOLOG 2 (MPK2)"]
["AT3G52880","tan","Encodes a peroxisomal monodehydroascorbate reductase, involved in the ascorbate-glutathione cycle which removes toxic H2O2","MONODEHYDROASCORBATE REDUCTASE 1 (MDAR1)","MONODEHYDROASCORBATE REDUCTASE 1 (MDAR1);MONODEHYDROASCORBATE REDUCTASE 1 (ATMDAR1)"]
["AT1G53500","tan","encodes a putative NDP-L-rhamnose synthase, an enzyme required for the synthesis of the pectin rhamnogalacturonan I, the major component of Arabidopsis mucilage. Gene is involved in seed coat mucilage cell development. Mutant analyses suggest that MUM4 is required for complete mucilage synthesis, cytoplasmic rearrangement and seed coat development.","MUCILAGE-MODIFIED 4 (MUM4)","MUCILAGE-MODIFIED 4 (MUM4);RHAMNOSE BIOSYNTHESIS 2 (RHM2);ARABIDOPSIS THALIANA RHAMNOSE BIOSYNTHESIS 2 (ATRHM2);ARABIDOPSIS THALIANA MUCILAGE-MODIFIED 4 (ATMUM4)"]
["AT1G30410","tan","member of MRP subfamily","ATP-BINDING CASSETTE C12 (ABCC12)","MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 13 (ATMRP13);ATP-BINDING CASSETTE C12 (ABCC12);MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 13 (MRP13)"]
["AT1G74720","tan","Encodes a putative transmembrane protein carrying four C(2) domains, suggesting that QKY may function in membrane trafficking in a Ca(2+)-dependent fashion. Mutant analysis shows that this gene is involved in organ development.","QUIRKY (QKY)","MULTIPLE C2 DOMAIN AND TRANSMEMBRANE REGION PROTEIN 15 (MCTP15);QUIRKY (QKY)"]
["AT1G51570","tan","Required for maintenance of inflorescence and shoot SAMs and normal development of the derived vascular cambium, functions in the SAM to promote continuous organogenesis, affects SAM development through STM, where it affects intracellular localization of STM in SAM cells in the peripheral region and prevents STM localization toward the cell wall of SAM cells in the peripheral region.","MULTIPLE C2 DOMAIN AND TRANSMEMBRANE REGION PROTEIN 4 (MCTP4)","MULTIPLE C2 DOMAIN AND TRANSMEMBRANE REGION PROTEIN 4 (MCTP4);FT INTERACTING PROTEIN 4 (FTIP4)"]
["AT3G51160","tan","Catalyzes the first step in the de novo synthesis of GDP-L-fucose. Loss of function mutations result in reduced levels of fucosylation and decreased freezing tolerance.","MURUS 1 (MUR1)","MURUS 1 (MUR1);MURUS 1 (MUR_1);GDP-D-MANNOSE-4,6-DEHYDRATASE 2 (GMD2);SENSITIVE TO FREEZING8 (SFR8)"]
["AT4G36180","tan","LRR-RLK which regulates lateral root development.","MUSTACHES-LIKE (MUL)","MUSTACHES-LIKE (MUL)"]
["AT5G16600","tan","Encodes a transcriptional regulator that directly activates lignin biosynthesis genes and phenylalanine biosynthesis genes during secondary wall formation.","MYB DOMAIN PROTEIN 43 (MYB43)","MYB DOMAIN PROTEIN 43 (AtMYB43);MYB DOMAIN PROTEIN 43 (MYB43)"]
["AT5G14750","tan","Encodes a MyB-related protein containing R2 and R3 repeats, involved in root and hypocotyl epidermal cell fate determination. Loss of function mutations make extra root hairs. Nuclear localized protein is a positive regulator for expression of CAPRICE (CPC).","MYB DOMAIN PROTEIN 66 (MYB66)","MYB DOMAIN PROTEIN 66 (MYB66);WEREWOLF 1 (WER1);MYB DOMAIN PROTEIN 66 (ATMYB66);WEREWOLF (WER)"]
["AT4G01550","tan","Encodes a plasma-membrane bound NAC transcription factor, whose controlled proteolytic activation allows it to enter the nucleus.","NAC DOMAIN CONTAINING PROTEIN 69 (NAC069)","NAC DOMAIN CONTAINING PROTEIN 69 (anac069);NAC DOMAIN CONTAINING PROTEIN 69 (NAC069);NAC WITH TRANSMEMBRANE MOTIF 2 (NTM2); (NTL13)"]
["AT1G74390","tan","Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11)","NAC45/86-DEPENDENT EXONUCLEASE-DOMAIN PROTEIN 3 (NEN3)","NAC45/86-DEPENDENT EXONUCLEASE-DOMAIN PROTEIN 3 (NEN3)"]
["AT1G31070","tan","Encodes a protein that functions as an N-acetylglucosamine-1-phosphate uridylyltransferase that catalyzes the formation of UDP-N-acetylglucosamine (UDP-GlcNAc). This is an essential precursor for glycolipid and glycoprotein synthesis and is also used for regulatory protein modification in signaling pathways. The enzyme can also catalyze the reverse reaction using both UDP-GlcNAc and the less common UDP-N-acetylgalactosamine as substrates.","N-ACETYLGLUCOSAMINE-1-PHOSPHATE URIDYLYLTRANSFERASE 1 (GlcNAc1pUT1)","N-ACETYLGLUCOSAMINE-1-PHOSPHATE URIDYLYLTRANSFERASE 1 (GlcNAc1pUT1);N-ACETYLGLUCOSAMINE-1-PHOSPHATE URIDYLYLTRANSFERASE 1 (GLCNA.UT1)"]
["AT3G57560","tan","encodes a N-acetylglutamate kinase, involved in arginine biosynthesis","N-ACETYL-L-GLUTAMATE KINASE (NAGK)","N-ACETYL-L-GLUTAMATE KINASE (NAGK)"]
["AT4G28220","tan","Encodes an external type II NADPH dehydrogenase in the plant mitochondrial electron transport chain that modulates NADP(H) reduction levels, which in turn affect central metabolism and growth, and interact with defense signaling.","NAD(P)H DEHYDROGENASE B1 (NDB1)","NAD(P)H DEHYDROGENASE B1 (NDB1)"]
["AT2G13560","tan","Encodes an NAD-dependent malic enzyme (NAD-ME) that does not act on oxaloacetate, indicating that it belongs to EC 1.1.1.39. It is a member of the alpha family of NAD-MEs in plants. It appears to function as a homodimer or as a heterodimer with the beta-type NAD-ME2 (At4g00570). NAD-ME1 transcript and protein levels are higher during the night than during the day. The mRNA is cell-to-cell mobile.","NAD-DEPENDENT MALIC ENZYME 1 (NAD-ME1)","NAD-DEPENDENT MALIC ENZYME 1 (NAD-ME1)"]
["AT3G27890","tan","Encodes NAD(P)H:quinone reductase which is an FMN binding protein that catalyzes the reduction of quinone substrates to hydroquinones.The enzyme activity was confirmed by in vitro assay.","NADPH:QUINONE OXIDOREDUCTASE (NQR)","NADPH:QUINONE OXIDOREDUCTASE (NQR)"]
["AT2G41680","tan","Encodes a NADPH thioredoxin reductase involved in chloroplast protection against oxidative damage.","NADPH-DEPENDENT THIOREDOXIN REDUCTASE C (NTRC)","NADPH-DEPENDENT THIOREDOXIN REDUCTASE C (NTRC)"]
["AT1G16520","tan","NAI1 interacting protein, involved in ER body and vesicle formation.","NAI2-INTERACTING PROTEIN 2 (NAIP2)","NAI2-INTERACTING PROTEIN 2 (NAIP2)"]
["AT2G23050","tan","A member of the NPY gene family (NPY1/AT4G31820, NPY2/AT2G14820, NPY3/AT5G67440, NPY4/AT2G23050, NPY5/AT4G37590). Involved in auxin-mediated organogenesis.","NAKED PINS IN YUC MUTANTS 4 (NPY4)","NAKED PINS IN YUC MUTANTS 4 (NPY4);MAB4/ENP/NPY1-LIKE 4 (MEL4)"]
["AT1G33040","tan","nascent polypeptide-associated complex subunit alpha-like protein 5;(source:Araport11)","NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 5 (NACA5)","NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 5 (NACA5)"]
["AT2G35110","tan","Component of the WAVE protein complex which act as activators of ARP2/3 complex involved in actin nucleation. Required for trichome morphogenesis. Mutant displays distorted trichomes, a phenotype that can be phenocopied by treatment of WT plants with actin-interacting drugs. Its ER localization is independent of upstream SPK1 activation signaling and the physical association with the WAVE/SCAR Regulatory complex binding partner SRA1. ER-localized NAP1 has little colocalization with actin and represent the inactive pool of NAP1 in these cell types. Suppresses ETI triggered cell death by interactions with translational machinery. Reference gene model updated to AT2G35110.2 (PMID:36797349)","GNARLED (GRL)","NCK-ASSOCIATED PROTEIN 1 (NAP1); (NAPP); (LPL3); (HEM1);GNARLED (GRL)"]
["AT1G18730","tan","likely a subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in PSI cyclic electron transport. Located on the thylakoid membrane. Mutant has impaired NAD(P)H dehydrogenase activity. The mRNA is cell-to-cell mobile.","PHOTOSYNTHETIC NDH SUBCOMPLEX B 4 (PnsB4)","NDH DEPENDENT FLOW 6 (NDF6);PHOTOSYNTHETIC NDH SUBCOMPLEX B 4 (PnsB4)"]
["AT5G06320","tan","encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression of this gene is induced by cucumber mosaic virus, spermine and Pseudomonas syringae pv. tomato DC3000. The gene product is localized to the plasma membrane.","NDR1/HIN1-LIKE 3 (NHL3)","NDR1/HIN1-LIKE 3 (NHL3)"]
["AT4G04910","tan","N-ethylmaleimide sensitive factor that can functionally complement yeast SEC18 AAA+ ATPase activity. Mutants show defects in intracellular vesicle mediated transport. Appears to affect cycling of PIN1 (and probably other proteins.)","N-ETHYLMALEIMIDE SENSITIVE FACTOR (NSF)","N-ETHYLMALEIMIDE SENSITIVE FACTOR (NSF)"]
["AT3G22790","tan","Encodes a member of the NET superfamily of proteins that potentially couples different membranes to the actin cytoskeleton in plant cells. It binds filamentous actin and is localized to the plasma membrane and plasmodesmata.","NETWORKED 1A (NET1A)","NETWORKED 1A (NET1A)"]
["AT5G05970","tan","a WD40 repeat protein related to the animal NEDD1/GCP-WD protein, which interacts with the g-tubulin complex. Plays a critical role in MT organization during mitosis","NEURAL PRECURSOR CELL EXPRESSED, DEVELOPMENTALLY DOWN-REGULATED GENE 1 (NEDD1)","NEURAL PRECURSOR CELL EXPRESSED, DEVELOPMENTALLY DOWN-REGULATED GENE 1 (NEDD1)"]
["AT4G25910","tan","Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU1 and 2 than to NFU4 and 5. Targeted to the chloroplast. The mRNA is cell-to-cell mobile.","NFU DOMAIN PROTEIN 3 (NFU3)","NFU DOMAIN PROTEIN 3 (NFU3); (AtCNFU3)"]
["AT1G09415","tan","encodes a kinase that physically interacts with NPR1/NIM1","NIM1-INTERACTING 3 (NIMIN-3)","NIM1-INTERACTING 3 (NIMIN-3)"]
["AT5G28290","tan","Encodes AtNek3, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.","NIMA-RELATED KINASE 3 (NEK3)","NIMA-RELATED KINASE 3 (NEK3);NIMA-RELATED KINASE 3 (ATNEK3)"]
["AT2G17150","tan","Plant regulator RWP-RK family protein;(source:Araport11)","NIN-LIKE PROTEIN 1 (NLP1)","NIN-LIKE PROTEIN 1 (NLP1)"]
["AT5G65640","tan","bHLH093/NFL encodes a bHLH transcription factor involved in GA mediated control of flowering time. Mutants are non-flowering in short days and phenotype can be reversed with GA application. Based on the expression of GA biosynthetic genes in the mutant, it likely acts through regulation of GA metabolism. Its expression shows developmental stage and tissue specificity. In short days it is expressed mainly in root tips and SAM, with weak expression in cotyledons throughout development. In LD GUS activity was observed in the hypocotyl and in root tips and SAM throughout the developmental stages.","BETA HLH PROTEIN 93 (bHLH093)","NO FLOWERING IN SHORT DAY (NFL);BETA HLH PROTEIN 93 (bHLH093)"]
["AT1G27460","tan","encodes a calmodulin-binding protein that is expressed in pollen, suspension culture cells, flowers, and fruits. The mRNA is cell-to-cell mobile.","NO POLLEN GERMINATION RELATED 1 (NPGR1)","NO POLLEN GERMINATION RELATED 1 (NPGR1)"]
["AT1G80460","tan","Encodes a protein similar to glycerol kinase, which converts glycerol to glycerol 3-phosphate and performs a rate-limiting step in glycerol metabolism. This gene is required for both general and specific resistance against bacteria and fungi. Arabidopsis thaliana glycerol kinase (GLR1) mRNA.Involved in flagellin-induced non-host resistance to Pseudomonas. Coronatine partially suppresses flagellin-induced expression of NHO1.","NONHOST RESISTANCE TO P. S. PHASEOLICOLA 1 (NHO1)","NONHOST RESISTANCE TO P. S. PHASEOLICOLA 1 (NHO1); (GLI1)"]
["AT1G67940","tan","member of NAP subfamily The mRNA is cell-to-cell mobile.","ATP-BINDING CASSETTE I17 (ABCI17)","NON-INTRINSIC ABC PROTEIN 3 (ATNAP3); (AtSTAR1);ATP-BINDING CASSETTE I17 (ABCI17);NON-INTRINSIC ABC PROTEIN 3 (NAP3);ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 3 (NAP3)"]
["AT5G02270","tan","member of NAP subfamily","ATP-BINDING CASSETTE I20 (ABCI20)","NON-INTRINSIC ABC PROTEIN 9 (NAP9);ATP-BINDING CASSETTE I20 (ABCI20)"]
["AT1G44575","tan","Encoding PSII-S (CP22), a ubiquitous pigment-binding protein associated with photosystem II (PSII) of higher plants. Involved in nonphotochemical quenching rather than in photosynthesis. Mutant has a normal violaxanthin cycle but has a limited capacity of quenching singlet excited chlorophylls and is tolerant to lipid peroxidation.","NONPHOTOCHEMICAL QUENCHING 4 (NPQ4)","NONPHOTOCHEMICAL QUENCHING 4 (NPQ4);PHOTOSYSTEM II SUBUNIT S (PSBS); (CP22)"]
["AT1G65420","tan","Chloroplast localized YCF20-like gene involved in nonphotochemical quenching. Has overlapping functions with npq6.","NONPHOTOCHEMICAL QUENCHING 7 (NPQ7)","NONPHOTOCHEMICAL QUENCHING 7 (NPQ7)"]
["AT3G06030","tan","NPK1-related protein kinase 3","NPK1-RELATED PROTEIN KINASE 3 (NP3)","NPK1-RELATED PROTEIN KINASE 3 (ANP3); (MAPKKK12);NPK1-RELATED PROTEIN KINASE 3 (NP3); (AtANP3)"]
["AT1G60800","tan","Encodes one of a group of LRR-RLKs, designated as CLAVATA3 INSENSITIVE RECEPTOR KINASES (CIKs), that act as co-receptors and have essential roles in regulating CLV3-mediated stem cell homeostasis.","NSP-INTERACTING KINASE 3 (NIK3)","NSP-INTERACTING KINASE 3 (NIK3); (ATNIK3);CLAVATA3 INSENSITIVE RECEPTOR KINASE 1 (CIK1)"]
["AT2G34720","tan","nuclear factor Y, subunit A4;(source:Araport11)","NUCLEAR FACTOR Y, SUBUNIT A4 (NF-YA4)","NUCLEAR FACTOR Y, SUBUNIT A4 (NF-YA4)"]
["AT5G47640","tan","Involved in the regulation of response to nutrient levels.","NUCLEAR FACTOR Y, SUBUNIT B2 (NF-YB2)","NUCLEAR FACTOR Y, SUBUNIT B2 (NF-YB2)"]
["AT5G63470","tan","Encodes a member of class of transcription regulators that his highly conserved across many plant species.In Arabidopsis and rice, NF-YC4 interacts with other members of this class and CO to regulate flowering. In Arabidopsis, it interacts with QQS to regulate C/N partitioning.","NUCLEAR FACTOR Y, SUBUNIT C4 (NF-YC4)","NUCLEAR FACTOR Y, SUBUNIT C4 (NF-YC4)"]
["AT5G56950","tan","Encodes a member of a small gene family of proteins with similarity to nucleosome assembly proteins.May function in nucleotide excision repair. Loss of function mutations have no obvious visible phenotypes but do seem to affect transcription of NER related genes. Plants mutated in three ubiquitously expressed NAP1 genes (NAP1;1~NAP1;3) and organ-specifically expressed NAP1;4 gene show hypersensitivity to genotoxic stresses including UV and DSB-inducing agent Bleomycin. The NAP1 genes act synergistically with NRP genes in promoting somatic homologous recombination.","NUCLEOSOME ASSEMBLY PROTEIN 1;3 (NAP1;3)","NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A 03 (NFA03);NUCLEOSOME ASSEMBLY PROTEIN 1;3 (NAP1;3);NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR GROUP A3 (NFA3)"]
["AT1G80300","tan","Encodes an ATP/ADP transporter. The mRNA is cell-to-cell mobile.","NUCLEOTIDE TRANSPORTER 1 (NTT1)","NUCLEOTIDE TRANSPORTER 1 (NTT1); (ATNTT1)"]
["AT3G12600","tan","nudix hydrolase homolog 16;(source:Araport11)","NUDIX HYDROLASE HOMOLOG 16 (NUDT16)","NUDIX HYDROLASE HOMOLOG 16 (atnudt16);NUDIX HYDROLASE HOMOLOG 16 (NUDT16)"]
["AT3G55370","tan","Encodes a nuclear localized Dof domain containing transcription factor expressed primarily in roots. Responsive to salicylic acid. Transgenic overexpressors have yellow leaves and short, defective roots.","OBF-BINDING PROTEIN 3 (OBP3)","OBF-BINDING PROTEIN 3 (OBP3)"]
["AT3G09070","tan","Encodes a polarly localised membrane-associated protein that regulates phloem differentiation entry.","OCTOPUS (OPS)","OCTOPUS (OPS)"]
["AT1G76400","tan","Ribophorin I;(source:Araport11)","OLIGOSACCHARYLTRANSFERASE 1B (OST1B)","OLIGOSACCHARYLTRANSFERASE 1B (OST1B)"]
["AT1G61790","tan","Encodes the OST3/6 subunit of the hetero-oligomeric plant oligosaccharyltransferase complex (OST). Also identified by GWAS as having a role in interspecific pollen tube recognition.","OLIGOSACCHARYLTRANSFERASE SUBUNIT 3/6 (OST3/6)","OLIGOSACCHARYLTRANSFERASE SUBUNIT 3/6 (OST3/6);ATU (ARTUMES)"]
["AT1G20510","tan","Encodes an OPC-8:CoA ligase involved in jasmonic acid biosynthesis.","OPC-8:0 COA LIGASE1 (OPCL1)","OPC-8:0 COA LIGASE1 (OPCL1)"]
["AT1G13170","tan","OSBP(oxysterol binding protein)-related protein 1D;(source:Araport11)","OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1D (ORP1D)","OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1D (ORP1D)"]
["AT3G09300","tan","OSBP(oxysterol binding protein)-related protein 3B;(source:Araport11)","OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3B (ORP3B)","OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3B (ORP3B)"]
["AT2G28900","tan","Encodes AtOEP16, a 16-KDa plastid outer membrane protein involved in plastid import of protochlorophyllide oxidoreductase A. Predominantly expressed in leaves and is also inducible by cold treatment.","OUTER PLASTID ENVELOPE PROTEIN 16-1 (OEP16-1)","OUTER ENVELOPE PROTEIN 16 (OEP16);OUTER PLASTID ENVELOPE PROTEIN 16-L (ATOEP16-L);OUTER PLASTID ENVELOPE PROTEIN 16-1 (ATOEP16-1);OUTER PLASTID ENVELOPE PROTEIN 16-1 (OEP16-1)"]
["AT2G19810","tan","Encodes Oxidation-related Zinc Finger 1 (OZF1), a plasma membrane protein involved in oxidative stress.","OXIDATION-RELATED ZINC FINGER 1 (OZF1)","OXIDATION-RELATED ZINC FINGER 1 (OZF1); (AtOZF1); (ATTZF2);TANDEM ZINC FINGER 2 (TZF2); (ATC3H20)"]
["AT5G37830","tan","Encodes a 5-oxoprolinase that acts in the glutathione degradation pathway and in 5-oxoproline metabolism.","OXOPROLINASE 1 (OXP1)","OXOPROLINASE 1 (OXP1)"]
["AT2G43080","tan","Encodes a prolyl-4 hydroxylase that can hydroxylate poly(L-proline),the collagen model peptide (Pro-Pro-Gly)10 and other proline rich peptides.","P4H ISOFORM 1 (AT-P4H-1)","P4H ISOFORM 1 (AT-P4H-1)"]
["AT3G06300","tan","Encodes a prolyl-4 hydroxylase that can hydroxylate poly(L-proline)and other proline rich peptides, including those with sequences corresponding to those in arabinogalactan proteins and extensins. The mRNA is cell-to-cell mobile.","PROLYL 4-HYDROXYLASE 2 (P4H2)","P4H ISOFORM 2 (AT-P4H-2);PROLYL 4-HYDROXYLASE 2 (P4H2)"]
["AT3G08730","tan","Encodes a protein-serine kinase that phosphorylates ribosomal protein in vitro. Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Involved in translational up-regulation of ribosomal proteins. Phosphorylated by PDK1. Interacts with RAPTOR1, which in turn interacts with TOR. SPK6 activity is affected by osmotic stress, and plants overexpressing S6k1 are hypersensitive to osmotic stress. The gene is expressed in all tissues examined, with highest expression level detected in metabolically active tissues.","PROTEIN-SERINE KINASE 1 (PK1)","P70 RIBOSOMAL S6 KINASE (S6K1);PROTEIN-SERINE KINASE 1 (PK1);ROTEIN-SERINE KINASE 6 (PK6); (ATS6K1);ARABIDOPSIS THALIANA PROTEIN-SERINE KINASE 6 (ATPK6);ARABIDOPSIS THALIANA PROTEIN-SERINE KINASE 1 (ATPK1)"]
["AT5G18660","tan","Encodes a protein with 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity. Mutants accumulate divinyl chlorophyll rather than monovinyl chlorophyll.","PALE-GREEN AND CHLOROPHYLL B REDUCED 2 (PCB2)","PALE-GREEN AND CHLOROPHYLL B REDUCED 2 (PCB2);BRZ-INSENSITIVE-PALE GREEN 1 (BPG1);3,8-DIVINYL PROTOCHLOROPHYLLIDE A 8-VINYL REDUCTASE (DVR)"]
["AT3G63200","tan","Group III patatin-like phospholipase which regulates lignin biosynthesis and influences the rate of seed germination.","PATATIN-LIKE PROTEIN 9 (PLP9)","PATATIN-LIKE PROTEIN 9 (PLP9); (PLA IIIB); (PPLAIIIDELTA)"]
["AT1G72150","tan","novel cell-plate-associated protein that is related in sequence to proteins involved in membrane trafficking in other eukaryotes The mRNA is cell-to-cell mobile.","PATELLIN 1 (PATL1)","PATELLIN 1 (PATL1)"]
["AT1G21750","tan","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily; isoform contains non-consensus GA donor splice site at intron 9. Transcript levels for this gene are up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). Neither AtIRE1-2 nor AtbZIP60 appear to be required for this response. The mRNA is cell-to-cell mobile.","PDI-LIKE 1-1 (PDIL1-1)","PDI-LIKE 1-1 (ATPDIL1-1);ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 5 (ATPDI5);PROTEIN DISULFIDE ISOMERASE 5 (PDI5);PDI-LIKE 1-1 (PDIL1-1)"]
["AT5G60640","tan","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin). However, the level of transcripts for this gene is slightly elevated in atbzip60 mutants.","PDI-LIKE 1-4 (PDIL1-4)","PDI-LIKE 1-4 (PDIL1-4);ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 2 (ATPDI2);PROTEIN DISULFIDE ISOMERASE 2 (PDI2);PDI-LIKE 1-4 (ATPDIL1-4)"]
["AT4G27080","tan","putative protein","PDI-LIKE 5-4 (PDIL5-4)","PDI-LIKE 5-4 (ATPDIL5-4);ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 7 (ATPDI7);PROTEIN DISULFIDE ISOMERASE 7 (PDI7);PDI-LIKE 5-4 (PDIL5-4)"]
["AT1G57590","tan","Pectinacetylesterase family protein;(source:Araport11)","PECTIN ACETYESTERASE 2 (PAE2)","PECTIN ACETYESTERASE 2 (PAE2);PECTIN ACETYESTERASE 2 (ATPAE2)"]
["AT3G09410","tan","Pectinacetylesterase family protein;(source:Araport11)","PECTIN ACETYESTERASE 5 (ATPAE5)","PECTIN ACETYESTERASE 5 (ATPAE5)"]
["AT3G43270","tan","Pectin methylesterase inhibitor; INVI-PMEI protein isoform which clustered with a PME.","PECTIN METHYL ESTERASE INHIBITOR-PECTIN METHYLESTERASE 32 (PMEI-PME32)","PECTIN METHYL ESTERASE INHIBITOR-PECTIN METHYLESTERASE 32 (PMEI-PME32)"]
["AT1G53840","tan","encodes a pectin methylesterase","PECTIN METHYLESTERASE 1 (PME1)","PECTIN METHYLESTERASE 1 (ATPME1);PECTIN METHYLESTERASE 1 (PME1)"]
["AT2G26440","tan","pectin methylesterase; INVI-PMEI protein isoform clustered with PME.","PECTIN METHYLESTERASE 12 (PME12)","PECTIN METHYLESTERASE 12 (PME12)"]
["AT3G49220","tan","Pectin methylesterase involved in transpiration, heat tolerance.","PECTIN METHYLESTERASE 34 (PME34)","PECTIN METHYLESTERASE 34 (PME34)"]
["AT4G33220","tan","Pectin methylesterase inhibitor; INVI-PMEI protein isoform which clustered with a PME.","PECTIN METHYLESTERASE 44 (PME44)","PECTIN METHYLESTERASE 44 (PME44);A. THALIANA PECTIN METHYLESTERASE 44 (ATPME44); (PMEI-PME44)"]
["AT2G18040","tan","phosphorylation-specific peptidyl prolyl cis/trans isomerase (PPIase) with specificity for phosphoserine-proline bonds The mRNA is cell-to-cell mobile.","PEPTIDYLPROLYL CIS/TRANS ISOMERASE, NIMA-INTERACTING 1 (PIN1AT)","PEPTIDYLPROLYL CIS/TRANS ISOMERASE, NIMA-INTERACTING 1 (PIN1AT)"]
["AT1G27660","tan","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)","PERICYCLE FACTOR TYPE-A 5 (PFA5)","PERICYCLE FACTOR TYPE-A 5 (PFA5)"]
["AT1G47750","tan","member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.","PEROXIN 11A (PEX11A)","PEROXIN 11A (PEX11A)"]
["AT1G03000","tan","Encodes an apparent ATPase similar to yeast and human protein required for peroxisomal biogenesis. May facilitate recycling of PEX5, the peroxisomal matrix protein receptor, and thereby promote peroxisomal matrix protein import.","PEROXIN 6 (PEX6)","PEROXIN 6 (PEX6)"]
["AT3G26060","tan","encodes periredoxin Q which decomposes peroxides and plays a role in the protection of the photosynthetic apparatus","PEROXIREDOXIN Q (PRXQ)","PEROXIREDOXIN Q (PRXQ); (ATPRX Q)"]
["AT3G52960","tan","Plastid localized peroxiredoxin.","PEROXIREDOXIN-II-E (PRXIIE)","PEROXIREDOXIN-II-E (PRXIIE)"]
["AT4G22890","tan","Encodes PGRL1A, a transmembrane protein present in thylakoids. PGRL1A has a highly homologous isoform PGRL1B encoded by At4g11960. Plants lacking PGRL1 show perturbation of cyclic electron flow, similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I). The mRNA is cell-to-cell mobile.","PGR5-LIKE A (PGRL1A)","PGR5-LIKE A (PGRL1A)"]
["AT4G11960","tan","Encodes PGRL1B, a transmembrane protein present in thylakoids. PGRL1B has a highly homologous isoform PGRL1A encoded by At4g22890. Plants lacking PGRL1 show perturbation of cyclic electron flow, similar to PGR5-deficient plants. PGRL1 and PGR5 interact physically and associate with PSI (photosystem I).","PGR5-LIKE B (PGRL1B)","PGR5-LIKE B (PGRL1B)"]
["AT2G34710","tan","Dominant PHB mutations cause transformation of abaxial leaf fates into adaxial leaf fates. Encodes a member of HD-Zip family which contains homeodomain-leucine zipper domains and domain similar to a mammalian sterol binding domain. Has overlapping functions with PHAVOLUTA, REVOLUTA and CORONA.","PHABULOSA (PHB)","PHABULOSA (PHB);ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 14 (ATHB14); (ATHB-14);PHABULOSA 1D (PHB-1D)"]
["AT1G80110","tan","phloem protein 2-B11;(source:Araport11)","PHLOEM PROTEIN 2-B11 (PP2-B11)","PHLOEM PROTEIN 2-B11 (ATPP2-B11);PHLOEM PROTEIN 2-B11 (PP2-B11)"]
["AT1G14040","tan","Encodes a PHO1 homologue that is upregulated in response to Zn deficiency and is involved in Pi homeostasis in response to Zn deficiency. The mRNA is cell-to-cell mobile.","PHO1 HOMOLOG 3 (PHO1;H3)","PHO1 HOMOLOG 3 (PHO1;H3)"]
["AT5G66410","tan","Encodes a protein that functions in microtubule assembly. Plants with reduced levels of both PLP3a (At3g50960) and PLP3b show defects in cytokinesis, cortical microtubule array formation, oriented cell growth, and maintenance of proper ploidy.","PHOSDUCIN-LIKE PROTEIN 3 HOMOLOG (PLP3b)","PHOSDUCIN-LIKE PROTEIN 3 HOMOLOG (PLP3b)"]
["AT2G16430","tan","Encodes an acid phosphatase involved plant acclimation to Pi deprivation.","PURPLE ACID PHOSPHATASE 10 (PAP10)","PHOSPHATASE UNDERPRODUCER 1 (PUP1);PURPLE ACID PHOSPHATASE 10 (PAP10); (ATPAP10)"]
["AT5G34850","tan","Encodes a root-secreted purple acid phosphatase precursor involved in extracellular phosphate-scavenging.","PURPLE ACID PHOSPHATASE 26 (PAP26)","PHOSPHATASE-UNDER PRODUCER 3 (PUP3);PURPLE ACID PHOSPHATASE 26 (PAP26);PURPLE ACID PHOSPHATASE 26 (ATPAP26)"]
["AT3G26570","tan","low affinity phosphate transporter","PHOSPHATE TRANSPORTER 2;1 (PHT2;1)","PHOSPHATE TRANSPORTER 2;1 (PHT2;1); (ORF02)"]
["AT5G44370","tan","Encodes an inorganic phosphate transporter (PHT4;6).","PHOSPHATE TRANSPORTER 4;6 (PHT4;6)","PHOSPHATE TRANSPORTER 4;6 (PHT4;6)"]
["AT2G39290","tan","Encodes a phosphatidylglycerolphosphate synthase 2C which is dual-targeted into chloroplasts and mitochondria. Mutant plants have mutant chloroplasts but normal mitochondria.","PHOSPHATIDYLGLYCEROLPHOSPHATE SYNTHASE 1 (PGP1)","PHOSPHATIDYLGLYCEROLPHOSPHATE SYNTHASE 1 (PGPS1);PHOSPHATIDYLGLYCEROLPHOSPHATE SYNTHASE 1 (PGP1); (PGS1)"]
["AT5G09350","tan","Encodes a phosphatidylinositol 4-OH kinase, PI-4Kbeta2. Arabidopsis contains 12 PI-4Ks in three separate families: PI-4Kalphs, PI-4kbeta, and PI-4Kgamma. PI-4Kbeta2 is 83% identical to PI-4kbeta1 encoded by At5g64070. Important for polarized root hair growth as the loss of this gene and its close relative PI-4kbeta1, leads to the formation of abnormal root hairs.","PHOSPHATIDYLINOSITOL 4-OH KINASE BETA2 (PI-4KBETA2)","PHOSPHATIDYLINOSITOL 4-OH KINASE BETA2 (PI4KBETA2);PHOSPHATIDYLINOSITOL 4-OH KINASE BETA2 (PI-4KBETA2)"]
["AT1G21980","tan","Type I phosphatidylinositol-4-phosphate 5-kinase. Preferentially phosphorylates PtdIns4P. Induced by water stress and abscisic acid in Arabidopsis thaliana. Expressed in procambial cells of leaves, flowers and roots. A N-terminal Membrane Occupation and Recognition Nexus (MORN)affects enzyme activity and distribution.","PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 1 (PIP5K1)","PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 1 (ATPIP5K1);PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 1 (PIP5K1); (ATPIPK1)"]
["AT1G77740","tan","Encodes PIP5K2, a phosphatidylinositol-4-phosphate 5-kinase (PtdIns(4)P 5-kinase 2; or PIP5K2 that is involved in regulating lateral root formation and root gravity response. The mRNA is cell-to-cell mobile.","PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 2 (PIP5K2)","PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 2 (PIP5K2)"]
["AT3G14940","tan","Encodes a cytosolic phosphoenolpyruvate carboxylase (PEPC) that has activity when expressed in E.coli. Its mRNA is most abundantly expressed in roots and siliques. PPC3 belongs to the plant-type PEPC family. It can form an enzymatically active complex with a castor bean ortholog of PPC4, which encodes a bacterial-type PEPC. The mRNA is cell-to-cell mobile.","PHOSPHOENOLPYRUVATE CARBOXYLASE 3 (PPC3)","PHOSPHOENOLPYRUVATE CARBOXYLASE 3 (ATPPC3);PHOSPHOENOLPYRUVATE CARBOXYLASE 3 (PPC3)"]
["AT1G08650","tan","Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light. The mRNA is cell-to-cell mobile.","PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 1 (PPCK1)","PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 1 (PPCK1);PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 1 (ATPPCK1)"]
["AT1G48600","tan","Encodes a phosphoethanolamine N-methyltransferase that catalyses the last two methylation steps of the three sequential methylations of phosphoethanolamine (PEA) that are required for the synthesis of phosphocholine (PCho) in plants.","PHOSPHOETHANOLAMINE N-METHYLTRANSFERASE (PMEAMT)","PHOSPHOETHANOLAMINE N-METHYLTRANSFERASE (PMEAMT); (AtPMEAMT);PHOSPHOETHANOLAMINE METHYLTRANSFERASE2 (ATPMT2)"]
["AT4G29220","tan","phosphofructokinase 1;(source:Araport11)","PHOSPHOFRUCTOKINASE 1 (PFK1)","PHOSPHOFRUCTOKINASE 1 (PFK1)"]
["AT2G22480","tan","Phosphofructokinase isoform; target of plastidic thioredoxin-f-dependent redox regulation.","PHOSPHOFRUCTOKINASE 5 (PFK5)","PHOSPHOFRUCTOKINASE 5 (PFK5)"]
["AT5G51820","tan","Encodes a plastid isoform of the enzyme phosphoglucomutase involved in controlling photosynthetic carbon flow. Effective petiole movement against the direction of the gravity requires functional PGM activity that is required for full development of amyloplasts.","PHOSPHOGLUCOMUTASE (PGM)","PHOSPHOGLUCOMUTASE (PGM);STARCH-FREE 1 (STF1); (PGM1);ARABIDOPSIS THALIANA PHOSPHOGLUCOMUTASE (ATPGMP)"]
["AT1G23190","tan","Encodes a cytosolic phosphoglucomutase (PGM). Two Arabidopsis PGM proteins (AT1G70730/PGM2 and AT1G23190/PGM3) have high sequence similarities and redundant functions. Mature plants possessing a single cPGM allele had a major reduction in cPGM activity. Whereas pgm2 and pgm3 single mutants are undistinguishable from the wild type, loss of both PGM2 and PGM3 severely impairs male and female gametophyte development. The mRNA is cell-to-cell mobile.","PHOSPHOGLUCOMUTASE 3 (PGM3)","PHOSPHOGLUCOMUTASE 3 (PGM3)"]
["AT4G24620","tan","The PGI1 gene encodes the plastid phospho-glucose (Glc) isomerase. While pgi1-1 mutant has a deficiency in leaf starch synthesis, it accumulates starch in root cap cells. Flowering time of the pgi1-1 mutant is significantly delayed under short-day conditions.","PHOSPHOGLUCOSE ISOMERASE 1 (PGI1)","PHOSPHOGLUCOSE ISOMERASE 1 (PGI1); (PGI)"]
["AT1G17745","tan","encodes a 3-Phosphoglycerate dehydrogenase The mRNA is cell-to-cell mobile.","3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH)","PHOSPHOGLYCERATE DEHYDROGENASE 2 (PGDH2);3-PHOSPHOGLYCERATE DEHYDROGENASE (PGDH)"]
["AT1G79550","tan","Encodes cytosolic phosphoglycerate kinase (PGK3). Expression studies in PGK mutants showed that PGK1 and PGK3 were down-regulated in pgk3.2 and pgk1.1, respectively. These results indicate that the down-regulation of photosynthetic activity could be a plant strategy when glycolysis is impaired to achieve metabolic adjustment and optimize growth.","PHOSPHOGLYCERATE KINASE (PGK)","PHOSPHOGLYCERATE KINASE (PGK); (PGKC);PHOSPHOGLYCERATE KINASE 3 (PGK3)"]
["AT3G12780","tan","PGK1 was localized exclusively in the chloroplasts of photosynthetic tissues and is the photosynthetic isoform. The pgk1.1 knock-down mutant displayed reduced growth, lower photosynthetic capacity and starch content. Expression studies in PGK mutants showed that PGK1 and PGK3 were down-regulated in pgk3.2 and pgk1.1, respectively. These results indicate that the down-regulation of photosynthetic activity could be a plant strategy when glycolysis is impaired to achieve metabolic adjustment and optimize growth (DOI:10.1104/pp.17.01227).Functions redundantly with AT1G56190 in the chloroplast in the biosynthesis of thylakoid membrane galactolipids. Double mutants are photosynthetically incompetent, plants are albino and seedling lethal","PHOSPHOGLYCERATE KINASE 1 (PGK1)","PHOSPHOGLYCERATE KINASE 1 (PGK1); (PGKP1)"]
["AT1G52570","tan","member of C2-PLD subfamily","PHOSPHOLIPASE D ALPHA 2 (PLDALPHA2)","PHOSPHOLIPASE D ALPHA 2 (PLDALPHA2)"]
["AT5G05590","tan","Encodes phosphoribosylanthranilate isomerase which catalyzes the third step in the tryptophan biosynthetic pathway.","PHOSPHORIBOSYLANTHRANILATE ISOMERASE 2 (PAI2)","PHOSPHORIBOSYLANTHRANILATE ISOMERASE 2 (PAI2)"]
["AT1G29410","tan","Encodes phosphoribosylanthranilate isomerase which catalyzes the third step in tryptophan biosynthesis.","PHOSPHORIBOSYLANTHRANILATE ISOMERASE 3 (PAI3)","PHOSPHORIBOSYLANTHRANILATE ISOMERASE 3 (PAI3)"]
["AT1G32060","tan","Phosphoribulokinase is an essential enzyme of the Calvin-Benson-Bassham (CBB) cycle (photosynthetic carbon fixation). It catalyzes the ATP-dependent conversion of ribulose-5-phosphate (Ru5P) to ribulose-1,5-bisphosphate.","PHOSPHORIBULOKINASE (PRK)","PHOSPHORIBULOKINASE (PRK)"]
["AT1G18640","tan","Encodes a 3-phosphoserine phosphatase acting in the last step of serine biosynthesis within the chloroplast. Essential for embryo, pollen and root development.","3-PHOSPHOSERINE PHOSPHATASE (PSP)","PHOSPHOSERINE PHOSPHATASE 1 (PSP1);3-PHOSPHOSERINE PHOSPHATASE (PSP)"]
["AT3G03940","tan","Casein kinase involved in phosphorylation and ubiquination of RYR/PYLs, resulting in negative regulation of ABA response. Also acts in GA response pathway along with RGA1/CCA1.","PHOTOREGULATORY PROTEIN KINASE 3 (PPK3)","PHOTOREGULATORY PROTEIN KINASE 3 (PPK3);MUT9P-LIKE-KINASE 2 (MLK2);ARABIDOPSIS EL1-LIKE 3 (AEL3)"]
["AT1G64150","tan","Encodes an integral thylakoid membrane protein that is required for normal operation of oxygen-evolving complex (as evidenced by oxygen evolution rates) and for manganese incorporation. PAM71 belongs to a small gene family in Arabidopsis comprising five members. PAM71 is well conserved in the green lineage and shares homology with putative Ca2+/H+ exchangers from yeast (Saccharomyces cerevisiae) (GDT1) and human (Homo sapiens) (TMEM165).","BIVALENT CATION TRANSPORTER 1 (BICAT1)","PHOTOSYNTHESIS AFFECTED MUTANT71 (PAM71);CA(2+)/H(+) ANTIPORTER1 (CCHA1);BIVALENT CATION TRANSPORTER 1 (BICAT1)"]
["AT1G25520","tan","Member of the UPF0016 family of membrane proteins, belongs to the conserved group of Mn/Ca transporters. Might act to fine tune Mn allocation into the endoplasmic reticulum of specific cell types.","PHOTOSYNTHESIS-AFFECTED MUTANT 71 LIKE 4 (PML4)","PHOTOSYNTHESIS-AFFECTED MUTANT 71 LIKE 4 (PML4)"]
["AT4G03280","tan","Encodes the Rieske FeS center of cytochrome b6f complex. Gene is expressed in shoot but not in root. Mutant has reduced electron transport at saturating light intensities and Q-cycle activity is hypersensitive to acidification of the thylakoid lumen. The mRNA is cell-to-cell mobile.","PHOTOSYNTHETIC ELECTRON TRANSFER C (PETC)","PHOTOSYNTHETIC ELECTRON TRANSFER C (PETC);PROTON GRADIENT REGULATION 1 (PGR1)"]
["AT5G43750","tan","NAD(P)H dehydrogenase 18;(source:Araport11)","PHOTOSYNTHETIC NDH SUBCOMPLEX B 5 (PnsB5)","PHOTOSYNTHETIC NDH SUBCOMPLEX B 5 (PnsB5);NAD(P)H DEHYDROGENASE 18 (NDH18)"]
["AT3G54890","tan","Encodes a component of the light harvesting complex associated with photosystem I.","PHOTOSYSTEM I LIGHT HARVESTING COMPLEX GENE 1 (LHCA1)","PHOTOSYSTEM I LIGHT HARVESTING COMPLEX GENE 1 (LHCA1)"]
["AT3G61470","tan","Encodes a component of the light harvesting antenna complex of photosystem I. The mRNA is cell-to-cell mobile.","PHOTOSYSTEM I LIGHT HARVESTING COMPLEX GENE 2 (LHCA2)","PHOTOSYSTEM I LIGHT HARVESTING COMPLEX GENE 2 (LHCA2)"]
["AT1G61520","tan","PSI type III chlorophyll a/b-binding protein (Lhca3*1) The mRNA is cell-to-cell mobile.","PHOTOSYSTEM I LIGHT HARVESTING COMPLEX GENE 3 (LHCA3)","PHOTOSYSTEM I LIGHT HARVESTING COMPLEX GENE 3 (LHCA3)"]
["AT1G45474","tan","Encodes a component of the light harvesting complex of photosystem I.","PHOTOSYSTEM I LIGHT HARVESTING COMPLEX GENE 5 (LHCA5)","PHOTOSYSTEM I LIGHT HARVESTING COMPLEX GENE 5 (LHCA5)"]
["AT4G02770","tan","Encodes a protein predicted by sequence similarity with spinach PsaD to be photosystem I reaction center subunit II (PsaD1)","PHOTOSYSTEM I SUBUNIT D-1 (PSAD-1)","PHOTOSYSTEM I SUBUNIT D-1 (PSAD-1); (PSAD1)"]
["AT1G03130","tan","Encodes a protein predicted by sequence similarity with spinach PsaD to be photosystem I reaction center subunit II (PsaD2)","PHOTOSYSTEM I SUBUNIT D-2 (PSAD-2)","PHOTOSYSTEM I SUBUNIT D-2 (PSAD-2)"]
["AT2G20260","tan","Encodes subunit E of photosystem I. The mRNA is cell-to-cell mobile.","PHOTOSYSTEM I SUBUNIT E-2 (PSAE-2)","PHOTOSYSTEM I SUBUNIT E-2 (PSAE-2)"]
["AT1G31330","tan","Encodes subunit F of photosystem I.","PHOTOSYSTEM I SUBUNIT F (PSAF)","PHOTOSYSTEM I SUBUNIT F (PSAF)"]
["AT1G55670","tan","Encodes subunit G of photosystem I, an 11-kDa membrane protein that plays an important role in electron transport between plastocyanin and PSI and is involved in the stability of the PSI complex. PSI-G subunit is bound to PSI-B and is in contact with Lhca1. The protein inserts into thylakoids by a direct or \"spontaneous\" pathway that does not involve the activities of any known chloroplast protein-targeting machinery. PSI-G appears to be directly or indirectly involved in the interaction between Photosystem I and plastocyanin.","PHOTOSYSTEM I SUBUNIT G (PSAG)","PHOTOSYSTEM I SUBUNIT G (PSAG)"]
["AT3G16140","tan","Encodes subunit H of photosystem I reaction center subunit VI.","PHOTOSYSTEM I SUBUNIT H-1 (PSAH-1)","PHOTOSYSTEM I SUBUNIT H-1 (PSAH-1)"]
["AT1G52230","tan","Phosphorylation of this protein is dependent on calcium. The mRNA is cell-to-cell mobile.","PHOTOSYSTEM I SUBUNIT H2 (PSAH2)","PHOTOSYSTEM I SUBUNIT H2 (PSAH2);PHOTOSYSTEM I SUBUNIT H-2 (PSAH-2); (PSI-H)"]
["AT1G30380","tan","Encodes subunit K of photosystem I reaction center. The mRNA is cell-to-cell mobile.","PHOTOSYSTEM I SUBUNIT K (PSAK)","PHOTOSYSTEM I SUBUNIT K (PSAK)"]
["AT1G08380","tan","Encodes subunit O of photosystem I.","PHOTOSYSTEM I SUBUNIT O (PSAO)","PHOTOSYSTEM I SUBUNIT O (PSAO)"]
["AT1G67740","tan","PsbY precursor (psbY) mRNA. This single nuclear gene is imported into the chloroplasts where it is processed into two integral membrane proteins with identical topology (PsbY-1 and PsbY-2). The protein appears to bind manganese. Important for the redox control of cytochrome b559.","PHOTOSYSTEM II BY (PSBY)","PHOTOSYSTEM II BY (PSBY); (YCF32)"]
["AT2G30170","tan","Encodes a chloroplast PP2C phosphatase that is required for efficient dephosphorylation of PSII proteins and involved in light acclimation.Loss of function enhances immunity to bacterial pathogens.","PHOTOSYSTEM II CORE PHOSPHATASE (PBCP)","PHOTOSYSTEM II CORE PHOSPHATASE (PBCP); (ATPP2C26)"]
["AT2G34420","tan","Photosystem II type I chlorophyll a/b-binding protein","PHOTOSYSTEM II LIGHT HARVESTING COMPLEX GENE B1B2 (LHB1B2)","PHOTOSYSTEM II LIGHT HARVESTING COMPLEX GENE B1B2 (LHB1B2);PHOTOSYSTEM II LIGHT HARVESTING COMPLEX GENE 1.5 (LHCB1.5)"]
["AT2G20890","tan","Chloroplast-localized Thylakoid formation1 gene product involved in vesicle-mediated formation of thylakoid membranes. Thf1 antisense lines contain abnormal chloroplasts early in leaf development (chloroplasts have loosely stacked thylakoid membranes). Expression was induced in the light and decreased under dark conditions. G-alpha interaction partner that functions downstream of the plasma membrane?delimited heterotrimeric G-protein (GPA1) in a D-glucose signaling pathway. Localized to both the outer plastid membrane and the stroma. Probably involved in the metabolic pathway that controls the assembly of the PS II complex. The mRNA is cell-to-cell mobile.","PHOTOSYSTEM II REACTION CENTER PSB29 PROTEIN (PSB29)","PHOTOSYSTEM II REACTION CENTER PSB29 PROTEIN (PSB29);THYLAKOID FORMATION1 (THF1)"]
["AT2G30570","tan","Encodes PsbW, a protein similar to photosystem II reaction center subunit W. Loss of PsbW destabilizes the supramolecular organization of PSII.","PHOTOSYSTEM II REACTION CENTER W (PSBW)","PHOTOSYSTEM II REACTION CENTER W (PSBW)"]
["AT1G06680","tan","Encodes a 23 kD extrinsic protein that is part of photosystem II and participates in the regulation of oxygen evolution. Phosphorylation of this protein is dependent on calcium. In plsp1-1 mutant plastids, the nonmature form of the protein localizes in the stroma. The mRNA is cell-to-cell mobile.","PHOTOSYSTEM II SUBUNIT P-1 (PSBP-1)","PHOTOSYSTEM II SUBUNIT P (PSII-P);OXYGEN-EVOLVING ENHANCER PROTEIN 2 (OEE2);PHOTOSYSTEM II SUBUNIT P-1 (PSBP-1);OXYGEN EVOLVING COMPLEX SUBUNIT 23 KDA (OE23)"]
["AT4G05180","tan","Encodes the PsbQ subunit of the oxygen evolving complex of photosystem II.","PHOTOSYSTEM II SUBUNIT Q-2 (PSBQ-2)","PHOTOSYSTEM II SUBUNIT Q (PSBQ);PHOTOSYSTEM II SUBUNIT Q-2 (PSBQ-2); (PSII-Q)"]
["AT1G79040","tan","Encodes for the 10 kDa PsbR subunit of photosystem II (PSII). This subunit appears to be involved in the stable assembly of PSII, particularly that of the oxygen-evolving complex subunit PsbP. Mutants defective in this gene have reduced amounts of subunits PsbP and PsbQ in PSII. In turn, assembly of PsbR is dependent on the presence of PsbJ.","PHOTOSYSTEM II SUBUNIT R (PSBR)","PHOTOSYSTEM II SUBUNIT R (PSBR)"]
["AT2G06520","tan","Encodes a protein with sequence similarity to the spinach photosystem II subunit PsbX.","PHOTOSYSTEM II SUBUNIT X (PSBX)","PHOTOSYSTEM II SUBUNIT X (PSBX)"]
["AT5G20360","tan","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","PHOX3 (Phox3)","PHOX3 (Phox3)"]
["AT4G13640","tan","Homeodomain-like superfamily protein;(source:Araport11)","UNFERTILIZED EMBRYO SAC 16 (UNE16)","PHR1-LIKE 3 (PHL3);UNFERTILIZED EMBRYO SAC 16 (UNE16)"]
["AT4G29080","tan","phytochrome-associated protein 2 (PAP2)","PHYTOCHROME-ASSOCIATED PROTEIN 2 (PAP2)","PHYTOCHROME-ASSOCIATED PROTEIN 2 (PAP2);INDOLE-3-ACETIC ACID INDUCIBLE 27 (IAA27)"]
["AT2G31980","tan","Cystatins are inhibitors of cysteine proteinases.","PHYTOCYSTATIN 2 (CYS2)","PHYTOCYSTATIN 2 (AtCYS2);PHYTOCYSTATIN 2 (CYS2)"]
["AT3G11945","tan","Encodes a protein involved in plastoquinone-9 biosynthesis. The enzyme possesses homogentisate prenyltransferase activity and was shown to use solanesyl diphosphate, farnesyl diphosphate and geranylgeranyldiphosphate as prenyl donors, but not phytyldiphosphate. This gene At3g11945 derives from a split of At3g11950, publications Tian et al (2007) and Sadre et al (2006) refer to this gene as At3g11950.","HOMOGENTISATE PRENYLTRANSFERASE (HST)","PHYTOENE DESATURATION 2 (PDS2);HOMOGENTISATE PRENYLTRANSFERASE (ATHST);HOMOGENTISATE PRENYLTRANSFERASE (HST)"]
["AT5G17230","tan","Encodes phytoene synthase that is the rate-limiting enzyme in the carotenoid biosynthetic pathway and that interacts with the ORANGE (OR) protein. PSY's expression is posttransciptionally regulated by OR.","PHYTOENE SYNTHASE (PSY)","PHYTOENE SYNTHASE (PSY)"]
["AT4G32260","tan","ATPase, F0 complex, subunit B/B, bacterial/chloroplast;(source:Araport11)","PIGMENT DEFECTIVE 334 (PDE334)","PIGMENT DEFECTIVE 334 (PDE334)"]
["AT5G09790","tan","Encodes a SET-domain protein, a H3K27 monomethyltransferases required for chromatin structure and gene silencing. Regulates heterochromatic DNA replication. Contains a PCNA-binding domain. ATXR5 accumulates preferentially during the late G1 or S phase, suggesting that it plays a role in cell-cycle regulation or progression. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.","ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 (ATXR5)","PIGMENT DEFECTIVE 336 (PDE336);SETDOMAIN GROUP 15 (SDG15);ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 (ATXR5)"]
["AT2G01140","tan","Plastid localized fructose 1,6-bisphosphate aldolase, a CBB pathway enzyme.","PIGMENT DEFECTIVE 345 (PDE345)","PIGMENT DEFECTIVE 345 (PDE345);FRUCTOSE-BISPHOSPHATE ALDOLASE 3 (FBA3); (ATFBA3)"]
["AT1G71090","tan","Auxin efflux carrier family protein;(source:Araport11)","PIN-LIKES 2 (PILS2)","PIN-LIKES 2 (PILS2)"]
["AT5G18410","tan","distorted trichomes and exhibits a diffuse actin cytoskeleton","PIROGI 121 (PIR121)","PIROGI (PIR);KLUNKER (KLK);PIROGI 121 (PIR121); (LPL2); (PIRP); (ATSRA1); (SRA1)"]
["AT5G15930","tan","Encodes a putative plant adhesion molecule.","PLANT ADHESION MOLECULE 1 (PAM1)","PLANT ADHESION MOLECULE 1 (PAM1)"]
["AT1G49780","tan","PUB25 and PUB26 are closely related paralogs that encode functional E3 ligases. They function in immune response pathway by targeting BIK1 for degradation.","PLANT U-BOX 26 (PUB26)","PLANT U-BOX 26 (PUB26)"]
["AT3G54790","tan","ARM repeat superfamily protein;(source:Araport11)","PLANT U-BOX 3 (PUB3)","PLANT U-BOX 3 (PUB3)"]
["AT1G23030","tan","Encodes a plant U-Box protein that is capable of binding and ubiquitinating a variety of targets including MYC2,LRR1,KIN and acting as an E3 ligase. Regulates a number of physiological hormonal and environment al responses via selective degradation of targets.Unlike PUB10, its closest homolog in Arabidopsis, it does not appear to play a major role in the MeJA-mediated response.","PLANT U-BOX PROTEIN 11 (PUB11)","PLANT U-BOX PROTEIN 11 (PUB11)"]
["AT4G04210","tan","Arabidopsis thaliana CDC48-interacting UBX-domain protein (PUX4)","PLANT UBX DOMAIN CONTAINING PROTEIN 4 (PUX4)","PLANT UBX DOMAIN CONTAINING PROTEIN 4 (PUX4); (PUX4)"]
["AT2G40120","tan","Protein kinase superfamily protein;(source:Araport11)","PLANT-SPECIFIC DUAL-SPECIFICITY TYROSINE PHOSPHORYLATION-REGULATED KINASE 3 (DYRKP-3)","PLANT-SPECIFIC DUAL-SPECIFICITY TYROSINE PHOSPHORYLATION-REGULATED KINASE 3 (DYRKP-3)"]
["AT5G19930","tan","PGR is putative plasma membrane glucose- responsive regulator that is expressed in response to glucose stimulation.RNAi knockdown mutant seeds have enhanced sensitivity to glucose and 2-deoxyglucose.","PLASMA MEMBRANE GLUCOSE-RESPONSIVE REGULATOR (PGR)","PLASMA MEMBRANE GLUCOSE-RESPONSIVE REGULATOR (PGR)"]
["AT1G01620","tan","a member of the plasma membrane intrinsic protein subfamily PIP1. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed ubiquitously and protein level decreases slightly during leaf development. Involved redundantly with PIP1;1/2/4/5 in hydraulics and carbon fixation, regulates the expression of related genes that affect plant growth and development.","PLASMA MEMBRANE INTRINSIC PROTEIN 1C (PIP1C)","PLASMA MEMBRANE INTRINSIC PROTEIN 1C (PIP1C); (TMP-B);PLASMA MEMBRANE INTRINSIC PROTEIN 1;3 (PIP1;3)"]
["AT2G16850","tan","plasma membrane intrinsic protein 2;(source:Araport11)","PLASMA MEMBRANE INTRINSIC PROTEIN 2;8 (PIP2;8)","PLASMA MEMBRANE INTRINSIC PROTEIN 2;8 (PIP2;8);PLASMA MEMBRANE INTRINSIC PROTEIN 3B (PIP3B)"]
["AT3G54820","tan","plasma membrane intrinsic protein 2;(source:Araport11)","PLASMA MEMBRANE INTRINSIC PROTEIN 2;5 (PIP2;5)","PLASMA MEMBRANE INTRINSIC PROTEIN 2D (PIP2D);PLASMA MEMBRANE INTRINSIC PROTEIN 2;5 (PIP2;5)"]
["AT2G39010","tan","Plasma membrane intrinsic protein 2E.","PLASMA MEMBRANE INTRINSIC PROTEIN 2E (PIP2E)","PLASMA MEMBRANE INTRINSIC PROTEIN 2E (PIP2E);PLASMA MEMBRANE INTRINSIC PROTEIN 2;6 (PIP2;6)"]
["AT1G18650","tan","Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and is predicted to bind callose.","PLASMODESMATA CALLOSE-BINDING PROTEIN 3 (PDCB3)","PLASMODESMATA CALLOSE-BINDING PROTEIN 3 (PDCB3)"]
["AT1G04520","tan","Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata.","PLASMODESMATA-LOCATED PROTEIN 2 (PDLP2)","PLASMODESMATA-LOCATED PROTEIN 2 (PDLP2)"]
["AT2G33330","tan","Encodes a plasmodesmal protein that affects the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.","PLASMODESMATA-LOCATED PROTEIN 3 (PDLP3)","PLASMODESMATA-LOCATED PROTEIN 3 (PDLP3)"]
["AT1G19880","tan","Encodes a regulator of chromatin condensation 1 (RCC1) family protein; confers plasticity of rosette diameter in response to changes in N availability.","PLASTICITY OF ROSETTE TO NITROGEN 1 (PROTON1)","PLASTICITY OF ROSETTE TO NITROGEN 1 (PROTON1)"]
["AT5G43745","tan","Chloroplast envelope ion channel protein, forms oligomers with PEC1 with regulator of K+ conductance domains protruding into the intermembrane space.","PLASTID ENVELOPE ION CHANNELS 2 (PEC2)","PLASTID ENVELOPE ION CHANNELS 2 (PEC2)"]
["AT3G46780","tan","plastid transcriptionally active 16;(source:Araport11)","PLASTID TRANSCRIPTIONALLY ACTIVE 16 (PTAC16)","PLASTID TRANSCRIPTIONALLY ACTIVE 16 (PTAC16)"]
["AT5G59250","tan","Encodes a chloroplast localized H+/glucose antiporter.","(HP59)","PLASTIDIC SUGAR TRANSPORTER (PSUT); (HP59)"]
["AT1G06870","tan","Peptidase S24/S26A/S26B/S26C family protein;(source:Araport11)","PLASTIDIC TYPE I SIGNAL PEPTIDASE 2A (PLSP2A)","PLASTIDIC TYPE I SIGNAL PEPTIDASE 2A (PLSP2A)"]
["AT3G58010","tan","plastoglobulin 34kD;(source:Araport11)","PLASTOGLOBULIN 34KD (PGL34)","PLASTOGLOBULIN 34KD (PGL34)"]
["AT2G22170","tan","Lipase/lipooxygenase, PLAT/LH2 family protein;(source:Araport11)","PLAT DOMAIN PROTEIN 2 (PLAT2)","PLAT DOMAIN PROTEIN 2 (PLAT2)"]
["AT5G39570","tan","Protein of unknown function. Binds phosphatidic acid and acts downstream of PLDalpha.","PLD REGULATED PROTEIN1 (PLDRP1)","PLD REGULATED PROTEIN1 (PLDRP1)"]
["AT2G26910","tan","Encodes a member of the PLEIOTROPIC DRUG RESISTANCE family of ATP binding cassette transporters. Required for the formation of a functional cuticle.","ATP-BINDING CASSETTE G32 (ABCG32)","PLEIOTROPIC DRUG RESISTANCE 4 (PDR4);PLEIOTROPIC DRUG RESISTANCE 4 (ATPDR4);ATP-BINDING CASSETTE G32 (ABCG32);PERMEABLE CUTICLE 1 (PEC1); (ATABCG32)"]
["AT1G67960","tan","POD1 is involved in pollen tube guidence and early embryo patterning.","POLLEN DEFECTIVE IN GUIDANCE 1 (POD1)","POLLEN DEFECTIVE IN GUIDANCE 1 (POD1)"]
["AT2G35350","tan","Encodes a protein most similar to the POLTERGEIST locus. Double mutant analysis of loss of function alleles indicate PLL1 functions redundantly with POL to regulate meristem size and pedicel length. Acts in a dose dependent manner with POL to suppress the clv1, clv2 and clv3 phenotypes.","POLTERGEIST LIKE 1 (PLL1)","POLTERGEIST LIKE 1 (PLL1)"]
["AT2G28890","tan","Encodes a protein phosphatase 2C like gene, similar to POL. Involved in leaf development. Knockout mutants have abnormally shaped leaves.","POLTERGEIST LIKE 4 (PLL4)","POLTERGEIST LIKE 4 (PLL4)"]
["AT1G70370","tan","Polygalacturonase involved in cell wall modification.","POLYGALACTURONASE 2 (PG2)","POLYGALACTURONASE 2 (PG2); (PGL3)"]
["AT2G41850","tan","ADPG2.","POLYGALACTURONASE ABSCISSION ZONE A. THALIANA (PGAZAT)","POLYGALACTURONASE ABSCISSION ZONE A. THALIANA (PGAZAT);ARABIDOPSIS DEHISCENCE ZONE POLYGALACTURONASE 2 (ADPG2)"]
["AT4G23500","tan","Pectin lyase-like superfamily protein;(source:Araport11)","POLYGALACTURONASE CLADE F 12 (PGF12)","POLYGALACTURONASE CLADE F 12 (PGF12)"]
["AT3G42950","tan","Putative membrane-bound polygalacturonase from clade F carrying probable hydrophobic transmembrane regions and N-terminal cytoplasmic tail with 3 or more amino acid residues.","POLYGALACTURONASE CLADE F 6 (PGF6)","POLYGALACTURONASE CLADE F 6 (PGF6)"]
["AT3G61490","tan","Pectin lyase-like superfamily protein;(source:Araport11)","POLYGALACTURONASE CLADE F 9 (PGF9)","POLYGALACTURONASE CLADE F 9 (PGF9)"]
["AT3G01150","tan","Encodes one of the two polypyrimidine tract-binding (PTB) protein homologs in the Arabidopsis genome. Double mutants have defects in pollen germination.","POLYPYRIMIDINE TRACT-BINDING PROTEIN 1 (PTB1)","POLYPYRIMIDINE TRACT-BINDING (PTB);POLYPYRIMIDINE TRACT-BINDING PROTEIN 1 (ATPTB1);POLYPYRIMIDINE TRACT-BINDING PROTEIN 1 (PTB1)"]
["AT4G39920","tan","Microtubule-folding cofactor, produces assembly-competent alpha-/beta-tubulin heterodimers.","PORCINO (POR)","PORCINO (POR);TUBULIN-FOLDING COFACTOR C (TFC C)"]
["AT4G30330","tan","Differs from PCP only in two amino acids, expression is regulated in a manner opposite to that of PCP in that it was upregulated in response to increasing ambient temperature.","PORCUPINE LIKE (PCP-LIKE)","PORCUPINE LIKE (PCP-LIKE);SM PROTEIN E2 (SME2)"]
["AT5G58600","tan","Belongs to a large family of plant-specific genes of unknown function. Involved in resistance to the powdery mildew species Erysiphe cichoracearum and Erysiphe orontii, but not to the unrelated pathogens Pseudomonas syringae or Peronospora parasitica. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","POWDERY MILDEW RESISTANT 5 (PMR5)","POWDERY MILDEW RESISTANT 5 (PMR5);TRICHOME BIREFRINGENCE-LIKE 44 (TBL44)"]
["AT3G54920","tan","Powdery mildew resistant mutant encodes a pectate lyase-like protein The mRNA is cell-to-cell mobile.","POWDERY MILDEW RESISTANT 6 (PMR6)","POWDERY MILDEW RESISTANT 6 (PMR6); (PLL13)"]
["AT2G20630","tan","Protein phosphatase which impairs plant drought tolerance by serving as a common negative regulator in the ABA signaling pathway.","PP2C INDUCED BY AVRRPM1 (PIA1)","PP2C INDUCED BY AVRRPM1 (PIA1)"]
["AT5G17070","tan","Encodes a PP4R2 domain protein that likely functions as a regulatory subunit of PP4, a highly conserved ser/thr protein phosphatase.","PP4R2 LIKE (PP4R2L)","PP4R2 LIKE (PP4R2L)"]
["AT2G07340","tan","PREFOLDIN 1;(source:Araport11)","PREFOLDIN 1 (PFD1)","PREFOLDIN 1 (PFD1)"]
["AT5G15860","tan","Encodes a protein with prenylcysteine methylesterase activity.","PRENYLCYSTEINE METHYLESTERASE (PCME)","PRENYLCYSTEINE METHYLESTERASE (PCME);PRENYLCYSTEINE METHYLESTERASE (ATPCME);ISOPRENYLCYSTEINE METHYLESTERASE (ICME)"]
["AT4G29350","tan","Encodes profilin2, a low-molecular weight, actin monomer-binding protein that regulates the organization of actin cytoskeleton. Expressed in vegetative organs. The first intron of PRF2 enhances gene expression. The mRNA is cell-to-cell mobile.","PROFILIN 2 (PFN2)","PROFILIN 2 (PFN2);PROFILIN 2 (PRO2);PROFILIN 2 (PRF2); (ATPRF2)"]
["AT2G17720","tan","Encodes a prolyl 4-hydroxylase that modifies the extensin proteins in root hair cells.","PROLYL 4-HYDROXYLASE 5 (P4H5)","PROLYL 4-HYDROXYLASE 5 (P4H5)"]
["AT2G05210","tan","Encodes AtPOT1a, an accessory factor for telomerase required for positive telomere length regulation. Note on nomenclature: different names have been given to Arabidopsis POT-like genes (Kuchar and Fajkus, 2004; Shakirov et al, 2005; Tani and Murata, 2005). According to a unifying nomenclature (Surovtseva et al, 2007), At2g05210 (previously named AtPOT1) is designated AtPOT1a, while At5g06310 (previously named AtPOT2) is designated AtPOT1b.","PROTECTION OF TELOMERES 1A (AtPOT1a)","PROTECTION OF TELOMERES 1A (AtPOT1a); (ATPOT1)"]
["AT1G13320","tan","one of three genes encoding the 65 kDa regulatory subunit of protein phosphatase 2A (PP2A)","PROTEIN PHOSPHATASE 2A SUBUNIT A3 (PP2AA3)","PROTEIN PHOSPHATASE 2A SUBUNIT A3 (PP2AA3)"]
["AT4G10050","tan","esterase/lipase/thioesterase family protein;(source:Araport11)","PROTEIN PHOSPHATASE METHYLESTERASE (PMES)","PROTEIN PHOSPHATASE METHYLESTERASE (PMES)"]
["AT3G56930","tan","Protein S-acyl transferase 4 (PAT4). Mutants display defects in root hair elongation. Along with SCN1 , it may be involved in targeting of ROP2 to the plasma membrane.","PROTEIN S-ACYL TRANSFERASE 4 (PAT4)","PROTEIN S-ACYL TRANSFERASE 4 (PAT4)"]
["AT1G16560","tan","Complements a yeast strain lacking PER1 gene suggesting that PGAP3B and Per1p are functional orthologs. Subcellular localization studies suggest that PGAP3A and PGAP3B cycle between the ER and the Golgi apparatus.","PROTEINS PHOSPHOLIPASE 3B (PGAP3B)","PROTEINS PHOSPHOLIPASE 3B (PGAP3B)"]
["AT2G05620","tan","Involved in electron flow in Photosystem I. Essential for photoprotection.","PROTON GRADIENT REGULATION 5 (PGR5)","PROTON GRADIENT REGULATION 5 (PGR5); (ATPGR5)"]
["AT5G66570","tan","Encodes a protein which is an extrinsic subunit of photosystem II and which has been proposed to play a central role in stabilization of the catalytic manganese cluster. In <i>Arabidopsis thaliana</i> the PsbO proteins are encoded by two genes: <i>psbO1</i> and <i>psbO2</i>. PsbO1 is the major isoform in the wild-type. In plsp1-1 mutant plastids, the nonmature form of the protein localizes in the membrane. The mRNA is cell-to-cell mobile.","PS II OXYGEN-EVOLVING COMPLEX 1 (PSBO1)","PS II OXYGEN-EVOLVING COMPLEX 1 (PSBO-1);33 KDA OXYGEN EVOLVING POLYPEPTIDE 1 (OEE1);MANGANESE-STABILIZING PROTEIN 1 (MSP-1);OXYGEN EVOLVING COMPLEX 33 KILODALTON PROTEIN (OE33);PS II OXYGEN-EVOLVING COMPLEX 1 (PSBO1);OXYGEN EVOLVING ENHANCER PROTEIN 33 (OEE33)"]
["AT4G28750","tan","mutant has Decreased effective quantum yield of photosystem II; Pale green plants; Reduced growth rate; Subunit E of Photosystem I","PSA E1 KNOCKOUT (PSAE-1)","PSA E1 KNOCKOUT (PSAE-1)"]
["AT1G20410","tan","Enzyme for the pseudouridine (&#936;) to uridine (U) conversion.","PSEUDOURIDINE SYNTHASE 10 (PUS10)","PSEUDOURIDINE SYNTHASE 10 (PUS10)"]
["AT5G03345","tan","membrane magnesium transporter-like protein;(source:Araport11)","PSI-INTERACTING ROOT-CELL ENRICHED 2 (PRCE2)","PSI-INTERACTING ROOT-CELL ENRICHED 2 (PRCE2)"]
["AT5G21930","tan","P-Type ATPase, mediates copper transport to chloroplast thylakoid lumen. Required for accumulation of copper-containing plastocyanin in the thylakoid lumen and for effective photosynthetic electron transport","P-TYPE ATPASE OF ARABIDOPSIS 2 (PAA2)","P-TYPE ATPASE OF ARABIDOPSIS 2 (PAA2);ARABIDOPSIS HEAVY METAL ATPASE 8 (ATHMA8);HEAVY METAL ATPASE 8 (HMA8)"]
["AT5G63140","tan","purple acid phosphatase 29;(source:Araport11)","PURPLE ACID PHOSPHATASE 29 (PAP29)","PURPLE ACID PHOSPHATASE 29 (ATPAP29);PURPLE ACID PHOSPHATASE 29 (PAP29); (PAP29)"]
["AT3G02540","tan","Encodes a member of the RADIATION SENSITIVE23 (RAD23) family: AT1G16190(RAD23A), AT1G79650(RAD23B), AT3G02540(RAD23C), AT5G38470(RAD23D). RAD23 proteins play an essential role in the cell cycle, morphology, and fertility of plants through their delivery of UPS (ubiquitin/26S proteasome system) substrates to the 26S proteasome.","RADIATION SENSITIVE23C (RAD23C)","PUTATIVE DNA REPAIR PROTEIN RAD23-3 (RAD23-3);RADIATION SENSITIVE23C (RAD23C)"]
["AT5G01890","tan","Leucine-rich receptor-like protein kinase family protein;(source:Araport11)","PXY/TDR-CORRELATED 2 (PXC2)","PXY/TDR-CORRELATED 2 (PXC2)"]
["AT2G41820","tan","Constitutively interacts with Brassinosteroid Insensitive 1-Associated Receptor Kinase 1 and is involved in vascular development.","PXY/TDR-CORRELATED 3 (PXC3)","PXY/TDR-CORRELATED 3 (PXC3)"]
["AT4G28650","tan","Encodes one of the two putative eLRR kinase closely related to PXY (At1g08590/PXL1 and At4g28650/PXL2). Insertion mutants in either pxl1 or pxl2 do not exhibit an obvious phenotype in the stem; double-mutant combinations of a Col allele, of pxy (pxy-3) with pxl1 and pxl2, generate a more severe vascular phenotype than pxy-3 alone, suggesting that these genes act synergistically with PXY in regulating vascular-tissue development in the stem.","PXY-LIKE2 (PXL2)","PXY-LIKE2 (PXL2);MALE DISCOVERER1 (MDIS1);MDIS1-INTERACTING RECEPTOR LIKE KINASE1 (MIK1)"]
["AT2G33255","tan","HAD-type hydrolase; dephosphorylates, with high substrate affinity, the B6 vitamer pyridoxal 5'-phosphate (PLP).","PYRIDOXAL 5&#8242;-PHOSPHATE PHOSPHATASE 1 (PLPP1)","PYRIDOXAL 5&#8242;-PHOSPHATE PHOSPHATASE 1 (PLPP1)"]
["AT5G12200","tan","Encodes a protein with dihydropyrimidine amidohydrolase activity. It localizes to the secretory system and plays a role in uracil metabolism.","PYRIMIDINE 2 (PYD2)","PYRIMIDINE 2 (PYD2)"]
["AT4G20960","tan","encodes diaminohydroxyphosphoribosylaminopyrimidine deaminase catalyzing the second step in the riboflavin biosynthesis","PYRIMIDINE DEAMINASE (PYRD)","PYRIMIDINE DEAMINASE (PYRD)"]
["AT2G29630","tan","Encodes a protein involved in thiamine biosynthesis. The protein is an iron-sulfur cluster protein predicted to catalyze the conversion of 5-aminoimidazole ribonucleotide (AIR) to hydroxymethylpyrimidine phosphate (HMP-P). A severe reduction of THIC levels in plants decreases vitamin B1 (thiamin diphosphate (TPP)) levels and also leads to changes in the levels of numerous other metabolites since so many primary metabolic enzymes require a TPP co-factor. thiC mutants are chlorotic and arrest in their development at the cotyledon stage. A N-terminal targeting sequence directs the THIC protein to the chloroplast stroma. The THIC transcript is regulated by a TPP riboswitch in the 3' UTR. THIC transcripts are observed in seedlings 5 or more days after germination, and light promotes the expression of this gene.","THIAMINC (THIC)","PYRIMIDINE REQUIRING (PY);THIAMINC (THIC)"]
["AT2G18230","tan","Encodes a protein that might have inorganic pyrophosphatase activity.","PYROPHOSPHORYLASE 2 (PPa2)","PYROPHOSPHORYLASE 2 (AtPPa2);PYROPHOSPHORYLASE 2 (PPa2)"]
["AT4G01480","tan","Encodes a protein that might have inorganic pyrophosphatase activity.","PYROPHOSPHORYLASE 5 (PPa5)","PYROPHOSPHORYLASE 5 (AtPPa5);PYROPHOSPHORYLASE 5 (PPa5)"]
["AT3G06483","tan","Pyruvate dehydrogenase kinase (PDK) specifically phosphorylates the E1&#945; subunit of the pyruvate dehydrogenase complex (PDC) on a Ser residue using ATP as a phosphate donor. PDK is a unique type of protein kinase having a His-kinase-like sequence but Ser-kinase activity. Site-directed mutagenesis and structural analysis indicate that PDK belongs to the GHKL superfamily.","PYRUVATE DEHYDROGENASE KINASE (PDK)","PYRUVATE DEHYDROGENASE KINASE (PDK); (ATPDHK)"]
["AT1G13860","tan","Encodes QUASIMODO2 LIKE1 (QUL1), a paralog of QUASIMODO2 (QUA2). AT1G78240 (QUA2), AT1G13860 (QUL1) and AT2G03480 (QUL2) form a clade with a possible role in plant vasculature development.","QUASIMODO2 LIKE 1 (QUL1)","QUASIMODO2 LIKE 1 (QUL1)"]
["AT2G03480","tan","Encodes QUASIMODO2 LIKE2 (QUL2), a paralog of QUASIMODO2 (QUA2). AT1G78240 (QUA2), AT1G13860 (QUL1) and AT2G03480 (QUL2) form a clade with a possible role in plant vasculature development.","QUASIMODO2 LIKE 2 (QUL2)","QUASIMODO2 LIKE 2 (QUL2)"]
["AT4G24490","tan","RAB geranylgeranyl transferase alpha subunit 1;(source:Araport11)","RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT 1 (RGTA1)","RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT 1 (RGTA1);RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT 1 (ATRGTA1)"]
["AT1G09630","tan","Encodes a putative GTP-binding protein. Associates with organelles on a pathway from the Golgi to the plasma membrane in interphase. In dividing cells acts at the cell plate.","RAB GTPASE 11C (RAB11c)","RAB GTPASE 11C (ATRAB11C);ARABIDOPSIS RAB GTPASE A2A (ATRABA2A);ARABIDOPSIS RAB GTPASE A2A (ATRAB-A2A);RAB GTPASE A2A (RAB-A2A);RAB GTPASE 11C (RAB11c)"]
["AT5G45750","tan","RAB GTPase homolog A1C;(source:Araport11)","RAB GTPASE HOMOLOG A1C (RABA1c)","RAB GTPASE HOMOLOG A1C (RABA1c);RAB GTPASE HOMOLOG A1C (AtRABA1c)"]
["AT5G59150","tan","RAB GTPase homolog A2D;(source:Araport11)","RAB GTPASE HOMOLOG A2D (RABA2D)","RAB GTPASE HOMOLOG A2D (ATRABA2D);RAB GTPASE HOMOLOG A2D (RABA2D);ARABIDOPSIS RAB GTPASE HOMOLOG A2D (ATRAB-A2D)"]
["AT5G47960","tan","Encodes a small molecular weight g-protein.","RAB GTPASE HOMOLOG A4C (RABA4C)","RAB GTPASE HOMOLOG A4C (ATRABA4C);SMALL MOLECULAR WEIGHT G-PROTEIN 1 (SMG1);RAB GTPASE HOMOLOG A4C (RABA4C)"]
["AT4G09720","tan","RAB GTPase homolog G3A;(source:Araport11)","RAB GTPASE HOMOLOG G3A (RABG3A)","RAB GTPASE HOMOLOG G3A (ATRABG3A);RAB GTPASE HOMOLOG G3A (RABG3A)"]
["AT1G52280","tan","RAB GTPase homolog G3D;(source:Araport11)","RAB GTPASE HOMOLOG G3D (RABG3d)","RAB GTPASE HOMOLOG G3D (AtRABG3d);RAB GTPASE HOMOLOG G3D (RABG3d)"]
["AT1G75840","tan","Belongs to the plant-specific ROP group of Rho GTPases; localized to the plasma membrane of tips of root hairs; involved in polar growth control. The mRNA is cell-to-cell mobile.","RAC-LIKE GTP BINDING PROTEIN 5 (ARAC5)","RAC-LIKE GTP BINDING PROTEIN 5 (ARAC5);RHO-LIKE GTP BINDING PROTEIN 4 (ATROP4);RHO-LIKE GTP BINDING PROTEIN 4 (ROP4);ARABIDOPSIS THALIANA GERANYLGERANYLATED PROTEIN 3 (ATGP3)"]
["AT5G27920","tan","Encodes a nuclear F-box protein that can directly interact with the C2H2&#8208;type zinc finger transcription factor STOP1 and promote its ubiquitination and degradation. STOP1 is crucial for aluminum (Al) resistance.","RAE1 HOMOLOG 1 (RAH1)","RAE1 HOMOLOG 1 (RAH1)"]
["AT5G40390","tan","Encodes a protein which might be involved in the formation of verbascose. A T-DNA insertion mutant was shown to have a decreased amount of verbascose (as well as mannitol) whereas the levels of raffinose and stachyose remained unchanged. Enhances drought tolerance through raffinose synthesis or galactinol hydrolysis.","SEED IMBIBITION 1-LIKE (SIP1)","RAFFINOSE SYNTHASE 5 (RS5);SEED IMBIBITION 1-LIKE (SIP1)"]
["AT3G05490","tan","Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.","RALF-LIKE 22 (RALFL22)","RALF-LIKE 22 (RALFL22)"]
["AT3G16570","tan","Encodes RALF23, a member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. RALF23 is significantly downregulated by brassinolide treatment of seedlings. Overexpression of AtRALF23 impairs brassinolide-induced hypocotyls elongation, and mature overexpressing plants are shorter and bushier. RALF23 overexpression produces slower growing seedlings with roots that have reduced capacity to acidify the rhizosphere.","RAPID ALKALINIZATION FACTOR 23 (RALF23)","RAPID ALKALINIZATION FACTOR 23 (RALF23);ARABIDOPSIS RAPID ALKALINIZATION FACTOR 23 (ATRALF23)"]
["AT5G67070","tan","Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. The mRNA is cell-to-cell mobile.","RALF-LIKE 34 (RALFL34)","RAPID ALKALINIZATION FACTOR 34 (RALF34);RALF-LIKE 34 (RALFL34)"]
["AT5G67280","tan","Encodes a receptor like kinase.","RECEPTOR-LIKE KINASE (RLK)","RECEPTOR-LIKE KINASE (RLK)"]
["AT3G17840","tan","Encodes a receptor-like kinase found at the cell surface of various tissues. Its function remains unknown.","RECEPTOR-LIKE KINASE 902 (RLK902)","RECEPTOR-LIKE KINASE 902 (RLK902)"]
["AT5G27680","tan","RECQ helicase SIM;(source:Araport11)","RECQ HELICASE SIM (RECQSIM)","RECQ HELICASE SIM (RECQSIM)"]
["AT1G15290","tan","Encodes REDUCED CHLOROPLAST COVERAGE 3 (REC3). Contributes to establishing the size of the chloroplast compartment.","REDUCED CHLOROPLAST COVERAGE 3 (REC3)","REDUCED CHLOROPLAST COVERAGE 3 (REC3)"]
["AT1G19360","tan","Encodes an arabinosyltransferase that modifies extensin proteins in root hair cells.","REDUCED RESIDUAL ARABINOSE 3 (RRA3)","REDUCED RESIDUAL ARABINOSE 3 (RRA3)"]
["AT3G26090","tan","Encodes AtRGS1, a putative membrane receptor for D-glucose. Also functions as a regulator of G-protein signaling. Has GTPase-accelerating activity. Regulates the activity of AtGPA1. Lines over-expressing the gene are more tolerant to dehydration and root elongation. These phenotypes are dependent on ABA. Nuclear localization of the protein is dependent on ABA. RGS1 endocytosis is induced by JA which promotes its dissociation from GPA1.","REGULATOR OF G-PROTEIN SIGNALING 1 (RGS1)","REGULATOR OF G-PROTEIN SIGNALING 1 (RGS1);REGULATOR OF G-PROTEIN SIGNALING 1 (ATRGS1)"]
["AT5G53160","tan","Encodes RCAR3, a regulatory component of ABA receptor. Interacts with protein phosphatase 2Cs ABI1 and ABI2. Stimulates ABA signaling. The mRNA is cell-to-cell mobile.","REGULATORY COMPONENTS OF ABA RECEPTOR 3 (RCAR3)","REGULATORY COMPONENTS OF ABA RECEPTOR 3 (RCAR3);PYR1-LIKE 8 (PYL8)"]
["AT2G20140","tan","Encodes one of the two RPT2 (26S proteasome subunit RPT2) paralogs: RPT2a (At4g29040) and RPT2b (At2g20140). RPT2b can not complement the rpt2a mutant phenotype. rpt2a rpt2b double mutants are embryo lethal.","REGULATORY PARTICLE AAA-ATPASE 2B (RPT2b)","REGULATORY PARTICLE AAA-ATPASE 2B (RPT2b)"]
["AT5G64760","tan","Encodes one of two isoforms for the 26S proteasome regulatory protein (RN) subunit RPN5. For many functions it acts redundantly with the paralogous genes RPN5a.","REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B (RPN5B)","REGULATORY PARTICLE NON-ATPASE SUBUNIT 5B (RPN5B)"]
["AT5G43010","tan","26S proteasome AAA-ATPase subunit RPT4a (RPT4a) mRNA,","REGULATORY PARTICLE TRIPLE-A ATPASE 4A (RPT4A)","REGULATORY PARTICLE TRIPLE-A ATPASE 4A (RPT4A)"]
["AT4G18590","tan","Nucleic acid-binding, OB-fold-like protein;(source:Araport11)","REPLICATION PROTEIN A 3B (RPA3B)","REPLICATION PROTEIN A 3B (RPA3B)"]
["AT2G01570","tan","Member of the VHIID/DELLA regulatory family. Contains homopolymeric serine and threonine residues, a putative nuclear localization signal, leucine heptad repeats, and an LXXLL motif. Putative transcriptional regulator repressing the gibberellin response and integration of phytohormone signalling. DELLAs repress cell proliferation and expansion that drives plant growth. The protein undergoes degradation in response to GA via the 26S proteasome. RGA1 binds to PIF3 and inhibits its DNA binding activity and thus affects the expression of PIF3 regulated genes. RGA may be involved in reducing ROS accumulation in response to stress by up-regulating the transcription of superoxide dismutases. Represses GA-induced vegetative growth and floral initiation. Rapidly degraded in response to GA. Involved in fruit and flower development.","REPRESSOR OF GA1-3 1 (RGA1)","REPRESSOR OF GA1-3 1 (RGA1);REPRESSOR OF GA (RGA);REPRESSOR OF GA (RGA24)"]
["AT2G41310","tan","Encodes an A- type response Regulator that is primarily expressed in the root and is involved in cytokinin-mediated signalling. Phosphatidylinositol 4-phosphate 5-kinase (PIP5K) enzyme family member.","RESPONSE REGULATOR 3 (RR3)","RESPONSE REGULATOR 3 (ATRR3);RESPONSE REGULATOR 8 (ARR8);RESPONSE REGULATOR 3 (RR3)"]
["AT4G39090","tan","Similar to cysteine proteinases, induced by desiccation but not abscisic acid. Required for RRS1-R mediated resistance against Ralstonia solanacearum. Interacts with the R. solanacearum type III effector PopP2. RD19 associates with PopP2 to form a nuclear complex that is required for activation of the RRS1-R?mediated resistance response.","RESPONSIVE TO DEHYDRATION 19 (RD19)","RESPONSIVE TO DEHYDRATION 19 (RD19);RESPONSIVE TO DEHYDRATION 19A (RD19A)"]
["AT1G47128","tan","Cysteine proteinase precursor-like protein/ dehydration stress-responsive gene (RD21). Has been shown to have peptide ligase activity and protease activity in vitro. RD21 is involved in immunity to the necrotrophic fungal pathogen Botrytis cinerea.Activity detected in root, leaf, flower and cell culture.","RESPONSIVE TO DEHYDRATION 21A (RD21A)","RESPONSIVE TO DEHYDRATION 21A (RD21A);RESPONSIVE TO DEHYDRATION 21 (RD21)"]
["AT1G64090","tan","Reticulan like protein B3;(source:Araport11)","RETICULAN LIKE PROTEIN B3 (RTNLB3)","RETICULAN LIKE PROTEIN B3 (RTNLB3);RETICULON 3 (RTN3)"]
["AT2G37860","tan","Encodes a protein involved in differential development of bundle sheath and mesophyll cell chloroplasts.","LOWER CELL DENSITY 1 (LCD1)","RETICULATA (RE);LOWER CELL DENSITY 1 (LCD1)"]
["AT3G08630","tan","alphavirus core family protein (DUF3411);(source:Araport11)","RETICULATA-RELATED 2 (RER2)","RETICULATA-RELATED 2 (RER2)"]
["AT2G15280","tan","Reticulon family protein;(source:Araport11)","RETICULON-LIKE B 10 (RTNLB10)","RETICULON-LIKE B 10 (RTNLB10)"]
["AT2G46170","tan","Reticulon family protein;(source:Araport11)","RETICULON-LIKE B 5 (RTNLB5)","RETICULON-LIKE B 5 (RTNLB5)"]
["AT3G10260","tan","Reticulon family protein;(source:Araport11)","RETICULON-LIKE B 8 (RTNLB8)","RETICULON-LIKE B 8 (RTNLB8)"]
["AT3G02230","tan","RGP1 is a UDP-arabinose mutase that catalyzes the interconversion between the pyranose and furanose forms of UDP-L-arabinose. It appears to be required for proper cell wall formation. rgp1/rgp2 (at5g15650) double mutants have a male gametophyte lethal phenotype. RGP1 fusion proteins can be found in the cytosol and peripherally associated with the Golgi apparatus. The mRNA is cell-to-cell mobile.","REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1 (RGP1)","REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1 (RGP1);ARABIDOPSIS THALIANA REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1 (ATRGP1)"]
["AT5G15650","tan","RGP2 is a UDP-arabinose mutase that catalyzes the interconversion between the pyranose and furanose forms of UDP-L-arabinose. It appears to be required for proper cell wall formation. rgp1(at3g02230)/rgp2 double mutants have a male gametophyte lethal phenotype. RGP2 fusion proteins can be found in the cytosol and peripherally associated with the Golgi apparatus. RGP2 was originally identified as Reversibly Glycosylated Polypeptide-2. Constitutive expression in tobacco impairs plant development and virus spread.","REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2 (RGP2)","REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2 (ATRGP2);MURUS 5 (MUR5);REVERSIBLY GLYCOSYLATED POLYPEPTIDE 2 (RGP2)"]
["AT5G48940","tan","RGFR2 is a leucine--rich repeat receptor kinase that, together with RGFR1 and RGFR3, binds ROOT GROWTH FACTORS and is required for establishing the gradient of PLETHORA1 and PLETHORA2 essential for proper root growth and development.","(RGFR2)","RGF1 INSENSITIVE 2 (RGI2); (RGFR2)"]
["AT1G34110","tan","Leucine-rich receptor-like protein kinase family protein;(source:Araport11)","RGF1 INSENSITIVE 5 (RGI5)","RGF1 INSENSITIVE 5 (RGI5)"]
["AT4G26410","tan","Encodes a protein predicted to have a 3-stranded helical structure that interacts with both AtRGS1 and AtHXK1 in planta and is required for some glucose-regulated gene expression.","RGS1-HXK1 INTERACTING PROTEIN 1 (RHIP1)","RGS1-HXK1 INTERACTING PROTEIN 1 (RHIP1)"]
["AT1G25290","tan","Predicted to be a plastid inner membrane localized rhomboid protease. Mutants show defects in phosphatidic acid metabolism.","RHOMBOID-LIKE PROTEIN 10 (RBL10)","RHOMBOID-LIKE PROTEIN 7 (ATRBL7);RHOMBOID-LIKE PROTEIN 10 (ATRBL10);RHOMBOID-LIKE PROTEIN 10 (RBL10);RHOMBOID-LIKE PROTEIN 8 (RBL8); (ATRBL8)"]
["AT2G39780","tan","Encodes the main endoribonuclease activity in plant cells and localizes to the endoplasmic reticulum (ER), ER-derived structures, and vacuoles. It is essential for normal ribosomal RNA recycling. The mRNA is cell-to-cell mobile.","RIBONUCLEASE 2 (RNS2)","RIBONUCLEASE 2 (RNS2)"]
["AT1G60770","tan","Ribosomal pentatricopeptide repeat protein","RIBOSOMAL PENTATRICOPEPTIDE REPEAT PROTEIN 4 (RPPR4)","RIBOSOMAL PENTATRICOPEPTIDE REPEAT PROTEIN 4 (RPPR4);RIBOSOMAL PROTEIN ML101 (ML101)"]
["AT3G06680","tan","Ribosomal L29e protein family;(source:Araport11)","RIBOSOMAL PROTEIN EL29Y (EL29Y)","RIBOSOMAL PROTEIN EL29Y (EL29Y)"]
["AT3G10610","tan","Ribosomal S17 family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES17X (ES17X)","RIBOSOMAL PROTEIN ES17X (ES17X)"]
["AT5G15520","tan","Ribosomal protein S19e family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES19Y (ES19Y)","RIBOSOMAL PROTEIN ES19Y (ES19Y)"]
["AT2G40590","tan","Ribosomal protein S26e family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES26Y (ES26Y)","RIBOSOMAL PROTEIN ES26Y (ES26Y)"]
["AT2G40510","tan","Ribosomal protein S26e family protein;(source:Araport11)","RIBOSOMAL PROTEIN ES26Z (ES26Z)","RIBOSOMAL PROTEIN ES26Z (ES26Z)"]
["AT5G40080","tan","Mitochondrial ribosomal protein L27;(source:Araport11)","RIBOSOMAL PROTEIN ML41Y (ML41Y)","RIBOSOMAL PROTEIN ML41Y (ML41Y)"]
["AT5G39800","tan","Mitochondrial ribosomal protein L27;(source:Araport11)","RIBOSOMAL PROTEIN ML41Z (ML41Z)","RIBOSOMAL PROTEIN ML41Z (ML41Z)"]
["AT5G57290","tan","60S acidic ribosomal protein family;(source:Araport11)","RIBOSOMAL P3 PROTEIN B (P3B)","RIBOSOMAL PROTEIN P3Y (P3Y); (ATP3B);RIBOSOMAL P3 PROTEIN B (P3B)"]
["AT5G46160","tan","Ribosomal protein L14p/L23e family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL14M (UL14M)","RIBOSOMAL PROTEIN UL14M (UL14M)"]
["AT1G26910","tan","Ribosomal protein L16p/L10e family protein;(source:Araport11)","RIBOSOMAL PROTEIN L10 B (RPL10B)","RIBOSOMAL PROTEIN UL16Y (UL16Y);RIBOSOMAL PROTEIN L10 B (RPL10B)"]
["AT4G39880","tan","Ribosomal protein L23/L15e family protein;(source:Araport11)","RIBOSOMAL PROTEIN UL23M (UL23M)","RIBOSOMAL PROTEIN UL23M (UL23M)"]
["AT1G77750","tan","Ribosomal protein S13/S18 family;(source:Araport11)","RIBOSOMAL PROTEIN US13M (US13M)","RIBOSOMAL PROTEIN US13M (US13M)"]
["AT4G30800","tan","Nucleic acid-binding, OB-fold-like protein;(source:Araport11)","RIBOSOMAL PROTEIN US17Y (US17Y)","RIBOSOMAL PROTEIN US17Y (US17Y)"]
["AT5G09510","tan","Ribosomal protein S19 family protein;(source:Araport11)","RIBOSOMAL PROTEIN US19X (US19X)","RIBOSOMAL PROTEIN US19X (US19X)"]
["AT1G67090","tan","Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410). Functions to yield sufficient Rubisco content for leaf photosynthetic capacity.","RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A (RBCS1A)","RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1A (RBCS1A)"]
["AT1G29730","tan","Encodes one of three RECEPTOR-LIKE KINASE IN FLOWERS 1 (RKF1) paralogues that is required in the stigmatic papillae and the female reproductive tract to promote compatible pollen grain hydration and pollen tube growth.","RKF-LIKE 2 (RKFL2)","RKF-LIKE 2 (RKFL2)"]
["AT4G11130","tan","Encodes RNA-dependent RNA polymerase that is required for endogenous siRNA (but not miRNA) formation. Nomenclature according to Xie, et al. (2004).","RNA-DEPENDENT RNA POLYMERASE 2 (RDR2)","RNA-DEPENDENT RNA POLYMERASE 2 (RDR2);SILENCING MOVEMENT DEFICIENT 1 (SMD1); (ATRDR2)"]
["AT3G49500","tan","Encodes RNA-dependent RNA polymerase. Involved in trans-acting siRNA and other siRNA biogenesis. Required for post-transcriptional gene silencing and natural virus resistance.Loss of function mutants produce ectopic megaspore mother cell and supernumary female gametophytes.","RNA-DEPENDENT RNA POLYMERASE 6 (RDR6)","RNA-DEPENDENT RNA POLYMERASE 6 (RDR6);SUPPRESSOR OF GENE SILENCING 2 (SGS2);SILENCING DEFECTIVE 1 (SDE1); (ATRDR6)"]
["AT1G30510","tan","Encodes a root-type ferredoxin:NADP(H) oxidoreductase.","ROOT FNR 2 (RFNR2)","ROOT FNR 2 (ATRFNR2);ROOT FNR 2 (RFNR2)"]
["AT3G13870","tan","required for regulated cell expansion and normal root hair development. Encodes an evolutionarily conserved protein with putative GTP-binding motifs that is implicated in the control of vesicle trafficking between the endoplasmic reticulum and the Golgi compartments. Degraded by LNP1 and 2 to maintain a tubular ER network.","ROOT HAIR DEFECTIVE 3 (RHD3)","ROOT HAIR DEFECTIVE 3 (RHD3);GOLGI MUTANT 8 (GOM8)"]
["AT3G51460","tan","Encodes RHD4 (ROOT HAIR DEFECTIVE4), a phosphatidylinositol-4-phosphate phosphatase required for root hair development. The mRNA is cell-to-cell mobile.","ROOT HAIR DEFECTIVE 4 (RHD4)","ROOT HAIR DEFECTIVE 4 (RHD4);ROOT HAIR DEFECTIVE4 (RHD4);SUPPRESSOR OF ACTIN 7 (SAC7)"]
["AT1G13770","tan","root UVB sensitive protein (Protein of unknown function, DUF647);(source:Araport11)","ROOT UV-B SENSITIVE 3 (RUS3)","ROOT UV-B SENSITIVE 3 (RUS3)"]
["AT1G21310","tan","Encodes extensin 3.","EXTENSIN 3 (EXT3)","ROOT-SHOOT-HYPOCOTYL DEFECTIVE (RSH);EXTENSIN 3 (ATEXT3);EXTENSIN 3 (EXT3)"]
["AT2G46710","tan","ROP (Rho of plant GTPases) family member Involved in cell wall patterning. Encodes ROP inactivator, regulates the formation of ROP-activated domains; these in turn determined the pattern of cell wall pits. Positively regulates pit formation, but negatively regulates pit size, required for periodic formation of secondary cell wall pits.","ROP GUANOSINE TRIPHOSPHATASE (GTPASE)-ACTIVATING PROTEIN 3 (ROPGAP3)","ROP GUANOSINE TRIPHOSPHATASE (GTPASE)-ACTIVATING PROTEIN 3 (ROPGAP3)"]
["AT2G37080","tan","Encodes RIP2 (ROP interactive partner 2), a putative Rho protein effector, interacting specifically with the active form of ROPs (Rho proteins of plants). Together with ICR5 involved in secondary wall patterning in the xylem and root hair polar growth.","ROP INTERACTIVE PARTNER 2 (RIP2)","ROP INTERACTIVE PARTNER 2 (RIP2);ROP INTERACTIVE PARTNER 3 (RIP3);INTERACTOR OF CONSTITUTIVELY ACTIVE ROP2 (ICR2)"]
["AT4G24580","tan","Encodes a Rho GTPase-activating protein that interacts with ROP1 (a Rho GTPase) and regulates pollen tube development. This protein can be observed at the apical tip of growing pollen tubes and on endocytic vesicles traveling to this region of the pollen tube.","ROP1 ENHANCER 1 (REN1)","ROP1 ENHANCER 1 (REN1)"]
["AT2G05940","tan","Encodes a receptor-like cytoplasmic kinase that phosphorylates the host target RIN4, leading to the activation of a plant innate immune receptor RPM1.","RPM1-INDUCED PROTEIN KINASE (RIPK)","RPM1-INDUCED PROTEIN KINASE (RIPK);PBS1-LIKE 14 (PBL14)"]
["AT2G39730","tan","Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco. Involved in jasmonate-induced leaf senescence.","RUBISCO ACTIVASE (RCA)","RUBISCO ACTIVASE (RCA)"]
["AT5G15950","tan","Adenosylmethionine decarboxylase family protein;(source:Araport11)","S-ADENOSYLMETHIONINE DECARBOXYLASE 2 (SAMDC2)","S-ADENOSYLMETHIONINE DECARBOXYLASE 2 (SAMDC2)"]
["AT4G01850","tan","Encodes an S-adenosylmethionine synthase that catalyzes the formation of S-adenosylmethionine from methionine and ATP. Functions in ethylene biosynthetic pathway.","S-ADENOSYLMETHIONINE SYNTHETASE 2 (SAM-2)","S-ADENOSYLMETHIONINE SYNTHETASE 2 (SAM-2); (MAT2);S-ADENOSYLMETHIONINE SYNTHETASE 2 (SAM2); (AtSAM2); (SAMS2)"]
["AT2G10410","tan","Member of Sadhu non-coding retrotransposon family","SADHU NON-CODING RETROTRANSPOSON 1-1 (SADHU1-1)","SADHU NON-CODING RETROTRANSPOSON 1-1 (SADHU1-1)"]
["AT1G03420","tan","Member of Sadhu non-coding retrotransposon family","SADHU NON-CODING RETROTRANSPOSON 4-2 (Sadhu4-2)","SADHU NON-CODING RETROTRANSPOSON 4-2 (Sadhu4-2)"]
["AT5G37850","tan","Encodes a pyridoxal kinase required for root hair development. Mutants are hypersensitive to Na+, K+ and Li+.","SALT OVERLY SENSITIVE 4 (SOS4)","SALT OVERLY SENSITIVE 4 (SOS4); (SNO1);SALT OVERLY SENSITIVE 4 (ATSOS4)"]
["AT3G54220","tan","Encodes a member of a novel family having similarity to DNA binding proteins containing basic-leucine zipper regions; scr is expressed in cortex/endodermal initial cells and in the endodermal cell lineage. Regulates the radial organization of the root. Is required cell-autonomously for distal specification of the quiescent center, which in turn regulates stem cell fate of immediately surrounding cells. SCR appears to be a direct target of SHR. SCR and SCR-LIKE 23 act redundantly in bundle sheath cell fate specification. The scr mutant has a higher level of hydrogen peroxide in the elongation zone due to reduced expression of peroxidase genes.","SCARECROW (SCR)","SCARECROW (SCR);SHOOT GRAVITROPISM 1 (SGR1)"]
["AT2G39250","tan","Encodes a AP2 domain transcription factor that can repress flowering. SNZ and its paralogous gene, SCHLAFMUTZE (SMZ), share a signature with partial complementarity to the miR172 microRNA, whose precursor is induced upon flowering.","SCHNARCHZAPFEN (SNZ)","SCHNARCHZAPFEN (SNZ)"]
["AT1G11130","tan","Encodes an atypical receptor-like kinase protein with a predicted extracellular domain of six leucine-rich repeats and an intracellular serine-threonine kinase domain expressed throughout the developing root but whose kinase activity is not essential for its function in vivo. Regulates expression of GLABRA2, CAPRICE, WEREWOLF, and ENHANCER OF GLABRA3. Required for floral organ shape, the development of the outer integument of ovules, and stem development. Regulates cell shape and cell division planes in the L2 layer of floral meristems and the L1-derived outer integument of ovules. Controls specification of epidermal root hairs. Participates in the coordination of cell morphogenesis between cell layers during floral development.","STRUBBELIG (SUB)","SCRAMBLED (SCM);STRUBBELIG (SUB);STRUBBELIG-RECEPTOR FAMILY 9 (SRF9)"]
["AT1G60989","tan","Encodes a member of a family of small, secreted, cysteine rich proteins with sequence similarity to SCR (S locus cysteine-rich protein).","SCR-LIKE 7 (SCRL7)","SCR-LIKE 7 (SCRL7)"]
["AT2G21540","tan","SEC14-like 3;(source:Araport11)","SEC14-LIKE 3 (SFH3)","SEC14-LIKE 3 (ATSFH3);SEC14-LIKE 3 (SFH3)"]
["AT3G55800","tan","Encodes the chloroplast enzyme sedoheptulose-1,7-bisphosphatase (SBPase), involved in the carbon reduction of the Calvin cycle. Increase in SBPase activity in transgenic lines accumulate up to 50% more sucrose and starch than wild-type. The mRNA is cell-to-cell mobile.","SEDOHEPTULOSE-BISPHOSPHATASE (SBPASE)","SEDOHEPTULOSE-BISPHOSPHATASE (SBPASE)"]
["AT1G55740","tan","seed imbibition 1;(source:Araport11)","SEED IMBIBITION 1 (SIP1)","SEED IMBIBITION 1 (AtSIP1);SEED IMBIBITION 1 (SIP1);RAFFINOSE SYNTHASE 1 (RS1)"]
["AT3G14067","tan","Encodes a protein with similarity to serine protease, subtilisin, that is upregulated during senescence and expressed in the arial portions of the plant.Loss of function mutations have increased branch number but normal silique length and seed set and therefore have increased fertility.","SENESCENCE-ASSOCIATED SUBTILISIN PROTEASE (SASP)","SENESCENCE-ASSOCIATED SUBTILISIN PROTEASE (SASP)"]
["AT2G22970","tan","serine carboxypeptidase-like 11;(source:Araport11)","SERINE CARBOXYPEPTIDASE-LIKE 11 (SCPL11)","SERINE CARBOXYPEPTIDASE-LIKE 11 (SCPL11)"]
["AT3G02110","tan","serine carboxypeptidase-like 25;(source:Araport11)","SERINE CARBOXYPEPTIDASE-LIKE 25 (scpl25)","SERINE CARBOXYPEPTIDASE-LIKE 25 (scpl25)"]
["AT2G35780","tan","serine carboxypeptidase-like 26;(source:Araport11)","SERINE CARBOXYPEPTIDASE-LIKE 26 (scpl26)","SERINE CARBOXYPEPTIDASE-LIKE 26 (scpl26)"]
["AT5G42240","tan","serine carboxypeptidase-like 42;(source:Araport11)","SERINE CARBOXYPEPTIDASE-LIKE 42 (scpl42)","SERINE CARBOXYPEPTIDASE-LIKE 42 (scpl42)"]
["AT3G10410","tan","SERINE CARBOXYPEPTIDASE-LIKE 49;(source:Araport11)","SERINE CARBOXYPEPTIDASE-LIKE 49 (scpl49)","SERINE CARBOXYPEPTIDASE-LIKE 49 (scpl49);CARBOXYPEPTIDASE Y (CPY)"]
["AT4G13930","tan","Encodes a serine hydroxymethyltransferase maximally expressed in root; involved in S-adenosyl-L-methionine biosynthesis, recycling of S-ademosylmethionine-dependent methylation, methionine formation, TCA cycle, carbohydrate metabolism and glycolysis.","SERINE HYDROXYMETHYLTRANSFERASE 4 (SHM4)","SERINE HYDROXYMETHYLTRANSFERASE 4 (SHM4)"]
["AT4G37930","tan","Encodes a protein with mitochondrial serine hydroxymethyltransferase activity, which functions in the photorespiratory pathway, catalyzes the conversion of serine and tetrahydrofolate to glycine and 5,10-methylene tetrahydrofolate. Involved in controlling cell damage caused by abiotic stress, such as high light and salt and the hypersensitive defense response of plants.","SERINE TRANSHYDROXYMETHYLTRANSFERASE 1 (SHM1)","SERINE TRANSHYDROXYMETHYLTRANSFERASE 1 (SHM1);SERINE TRANSHYDROXYMETHYLTRANSFERASE (STM);SERINE HYDROXYMETHYLTRANSFERASE 1 (SHMT1)"]
["AT5G08160","tan","Encodes a serine/threonine protein kinase.","SERINE/THREONINE PROTEIN KINASE 3 (PK3)","SERINE/THREONINE PROTEIN KINASE 3 (PK3);SERINE/THREONINE PROTEIN KINASE 3 (ATPK3)"]
["AT3G26030","tan","protein phosphatase 2A regulatory subunit isoform B' delta The mRNA is cell-to-cell mobile.","SERINE/THREONINE PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B PRIME DELTA (ATB' DELTA)","SERINE/THREONINE PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B PRIME DELTA (ATB' DELTA)"]
["AT2G41530","tan","Encodes a protein with S-formylglutathione hydrolase activity.","S-FORMYLGLUTATHIONE HYDROLASE (SFGH)","S-FORMYLGLUTATHIONE HYDROLASE (SFGH);ARABIDOPSIS THALIANA S-FORMYLGLUTATHIONE HYDROLASE (AtSFGH)"]
["AT5G14640","tan","GSK3-like kinase, subgroup II.","SHAGGY-LIKE KINASE 13 (SK13)","SHAGGY-LIKE KINASE 13 (SK13); (ASK&#949;);SHAGGY-LIKE KINASE 13 (ATSK13)"]
["AT2G30980","tan","Encodes a GSK3-like protein kinase. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts.","SHAGGY-RELATED PROTEIN KINASE DZETA (SKdZeta)","SHAGGY-LIKE PROTEIN KINASE 23 (ATSK23);SHAGGY-RELATED PROTEIN KINASE DZETA (SKdZeta);SHAGGY-RELATED PROTEIN KINASE DZETA (ASKdZeta);A. THALIANA SHAGGY-LIKE KINASE GROUP 2 2 (ATSK2-2);BIN2-LIKE 1 (BIL1)"]
["AT4G24190","tan","encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues.","SHEPHERD (SHD)","SHEPHERD (SHD);HEAT SHOCK PROTEIN 90.7 (HSP90.7);HEAT SHOCK PROTEIN 90.7 (AtHsp90.7);HEAT SHOCK PROTEIN 90-7 (AtHsp90-7); (HSP90)"]
["AT3G54430","tan","A member of SHI gene family. Arabidopsis thaliana has ten members that encode proteins with a RING finger-like zinc finger motif. Despite being highly divergent in sequence, many of the SHI-related genes are partially redundant in function and synergistically promote gynoecium, stamen and leaf development in Arabidopsis.","SHI-RELATED SEQUENCE 6 (SRS6)","SHI-RELATED SEQUENCE 6 (SRS6)"]
["AT1G29785","tan","Natural antisense transcript overlaps with AT1G29780. Has been identified as a translated small open reading frame by ribosome profiling.","SHORT OPEN READING FRAME 11 (SORF11)","SHORT OPEN READING FRAME 11 (SORF11)"]
["AT2G09795","tan","Natural antisense transcript overlaps with AT2G09800. Has been identified as a translated small open reading frame by ribosome profiling.","SHORT OPEN READING FRAME 19 (SORF19)","SHORT OPEN READING FRAME 19 (SORF19)"]
["AT3G26612","tan","Has been identified as a translated small open reading frame by ribosome profiling.","SHORT OPEN READING FRAME 28 (SORF28)","SHORT OPEN READING FRAME 28 (SORF28)"]
["AT3G48820","tan","Encodes a homolog of the animal sialyltransferases but sialyltransferase activity was not detected (Plant Biology 2009, 11:284). Located in the Golgi apparatus.","SIALYLTRANSFERASE-LIKE 2 (SIA2)","SIALYLTRANSFERASE-LIKE 2 (SIA2)"]
["AT4G24500","tan","Encodes a proline-rich protein SICKLE (SIC). Required for development and abiotic stress tolerance. Involved in microRNA biogenesis. It is involved in mRNA splicing. It is a single copy gene in Arabidopsis and likely specific to higher plants. Along with RCN1, it functions in regulating auxin transport processes in part by regulating the recycling of PIN1 and PIN2 auxin transporters. It is required for circadian clock temperature responses.","SICKLE (SIC)","SICKLE (SIC);ROTUNDA3 (RON3);WARP ACUTE RESPONSE OF PRR7 2 (WARP2)"]
["AT3G01680","tan","Encodes a protein localized to phloem filaments that is required for phloem filament formation. The mRNA is cell-to-cell mobile.","SIEVE-ELEMENT-OCCLUSION-RELATED 1 (SEOR1)","SIEVE ELEMENT OCCLUSION B (SEOB);SIEVE-ELEMENT-OCCLUSION-RELATED 1 (SEOR1);ARABIDOPSIS THALIANA SIEVE ELEMENT OCCLUSION-RELATED 1 (ATSEOR1)"]
["AT4G33410","tan","SIGNAL PEPTIDE PEPTIDASE-LIKE 1;(source:Araport11)","SIGNAL PEPTIDE PEPTIDASE-LIKE 1 (SPPL1)","SIGNAL PEPTIDE PEPTIDASE-LIKE 1 (ATSPPL1);SIGNAL PEPTIDE PEPTIDASE-LIKE 1 (SPPL1)"]
["AT5G66920","tan","SKU5 similar 17;(source:Araport11)","SKU5 SIMILAR 17 (sks17)","SKU5 SIMILAR 17 (sks17)"]
["AT5G48450","tan","Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein.","SKU5 SIMILAR 3 (sks3)","SKU5 SIMILAR 3 (sks3)"]
["AT1G76160","tan","SKU5 similar 5;(source:Araport11)","SKU5 SIMILAR 5 (sks5)","SKU5 SIMILAR 5 (sks5)"]
["AT4G34750","tan","SAUR-like auxin-responsive protein family;(source:Araport11)","SMALL AUXIN UPREGULATED RNA 49 (SAUR49)","SMALL AUXIN UPREGULATED RNA 49 (SAUR49)"]
["AT4G34760","tan","SAUR-like auxin-responsive protein family;(source:Araport11)","SMALL AUXIN UPREGULATED RNA 50 (SAUR50)","SMALL AUXIN UPREGULATED RNA 50 (SAUR50)"]
["AT1G07200","tan","Encodes a member of an eight-gene family (SMAX1 and SMAX1-like) that has weak similarity to AtHSP101, a ClpB chaperonin required for thermotolerance.","SMAX1-LIKE 6 (SMXL6)","SMAX1-LIKE 6 (SMXL6)"]
["AT1G49820","tan","encodes 5-methylthioribose kinase, involved in methionine cycle The mRNA is cell-to-cell mobile.","S-METHYL-5-THIORIBOSE KINASE (MTK)","S-METHYL-5-THIORIBOSE KINASE (ATMTK);S-METHYL-5-THIORIBOSE KINASE (MTK);5-METHYLTHIORIBOSE KINASE 1 (MTK1)"]
["AT3G14080","tan","Component of the 5?-3? mRNA decay pathway which constitutes a post-transcriptional regulatory layer of the circadian gene network.","SM-LIKE 1B (LSM1B)","SM-LIKE 1B (LSM1B)"]
["AT3G01090","tan","Encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase","SNF1 KINASE HOMOLOG 10 (KIN10)","SNF1 KINASE HOMOLOG 10 (AKIN10); (KIN10);SNF1 KINASE HOMOLOG 10 (KIN10); (SNRK1); (SNRK1&#945;1)"]
["AT3G19570","tan","Encodes SCO3 (snowy cotyledon3), a member of a largely uncharacterized protein family unique to the plant kingdom. The sco3-1 mutation alters chloroplast morphology and development, reduces chlorophyll accumulation, impairs thylakoid formation and photosynthesis in seedlings, and results in photoinhibition under extreme CO(2) concentrations in mature leaves. SCO3 is targeted to the periphery of peroxisomes. Together with QWRF2 redundantly modulates cortical microtubule arrangement in floral organ growth and fertility.","SNOWY COTYLEDON 3 (SCO3)","SNOWY COTYLEDON 3 (SCO3);QWRF DOMAIN CONTAINING 1 (QWRF1)"]
["AT1G13530","tan","soluble N-ethylmaleimide-sensitive factor (NSF) adaptor protein","SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR (NSF) ADAPTOR PROTEIN 30 (SNAP30)","SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR (NSF) ADAPTOR PROTEIN 30 (SNAP30)"]
["AT2G13800","tan","somatic embryogenesis receptor-like kinase 5;(source:Araport11)","SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 5 (SERK5)","SOMATIC EMBRYOGENESIS RECEPTOR LIKE KINASE 5 (ATSERK5);SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 5 (SERK5);BRI1- ASSOCIATED KINASE 8 (BAK8)"]
["AT1G34210","tan","Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. The mRNA is cell-to-cell mobile.","SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2 (SERK2)","SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2 (SERK2); (ATSERK2)"]
["AT1G79580","tan","NAC-domain protein. Involved in root cap development. Involved in a regulatory feedback loop with FEZ. FEZ activates SMB in hte root cap daughter cells soon after division, and SMB in turn represses FEZ expression in these cells, thereby preventing further stem cell divisions.","SOMBRERO (SMB)","SOMBRERO (SMB);ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 33 (ANAC033);UAS-TAGGED ROOT PATTERNING7 (URP7)"]
["AT2G28150","tan","DUF966 domain containing protein, expressed during embryogenesis.","SOSEKI3 (SOK3)","SOSEKI3 (SOK3)"]
["AT1G14290","tan","Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth.","SPHINGOID BASE HYDROXYLASE 2 (SBH2)","SPHINGOID BASE HYDROXYLASE 2 (SBH2); (ATSBH2)"]
["AT3G61580","tan","Fatty acid/sphingolipid desaturase;(source:Araport11)","SPHINGOID LCB DESATURASE 1 (SLD1)","SPHINGOID LCB DESATURASE 1 (SLD1); (ATSLD1)"]
["AT4G16340","tan","Encodes SPIKE1 (SPK1), the lone DOCK family guanine nucleotide exchange factor (GEF) in Arabidopsis. SPK1 is a peripheral membrane protein that accumulates at, and promotes the formation of, a specialized domain of the endoplasmic reticulum (ER) termed the ER exit site (ERES). SPK1 promotes polarized growth and cell-cell adhesion in the leaf epidermis. Mutant has seedling lethal; cotyledon, leaf-shape, trichome defects.","SPIKE1 (SPK1)","SPIKE1 (SPK1)"]
["AT2G03680","tan","The SPR1 gene encodes a plant-specific 12-kD protein which has a repeated motif at both ends, separated by a predicted rod-like domain, suggesting that it may act as an intermolecular linker. Ubiquitously expressed and belongs to a six-member gene family in Arabidopsis; expressed in transgenic seedlings localized to microtubules within the cortical array, preprophase band, phragmoplast, and mitotic spindle.","SPIRAL1 (SPR1)","SPIRAL1 (SPR1); (SKU6)"]
["AT3G02180","tan","SPIRAL1-LIKE3 belongs to a six-member gene family in Arabidopsis; all members share high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root, leaf and petal growth as a result of defective anisotropic cell expansion.","SPIRAL1-LIKE3 (SP1L3)","SPIRAL1-LIKE3 (SP1L3)"]
["AT2G47580","tan","encodes spliceosomal protein U1A","SPLICEOSOMAL PROTEIN U1A (U1A)","SPLICEOSOMAL PROTEIN U1A (U1A)"]
["AT1G27370","tan","In conjunction with SPL11 and SPL2, SPL10 redundantly controls proper development of lateral organs in association with shoot maturation in the reproductive phase. SPL2, SPL10, and SPL11, suppress root regeneration with age by inhibiting wound-induced auxin biosynthesis. SPL10 also controls lamina shape during vegetative development.","SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 10 (SPL10)","SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 10 (SPL10)"]
["AT2G15790","tan","SQN encodes the Arabidopsis homolog of cyclophilin 40 (CyP40). It is specifically required for the vegetative but not the reproductive maturation of the shoot. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","SQUINT (SQN)","SQUINT (SQN);CYCLOPHILIN 40 (CYP40)"]
["AT5G03650","tan","Encodes starch branching enzyme (E.C.2.4.1.18) similar to SBE2 from maize and rice. Expressed throughout the plant and highest in seedlings and cauline leaves.","STARCH BRANCHING ENZYME 2.2 (SBE2.2)","STARCH BRANCHING ENZYME 2.2 (SBE2.2)"]
["AT1G10760","tan","Encodes an &#945;-glucan, water dikinase required for starch degradation. Involved in cold-induced freezing tolerance. Mutations that eliminate the GWD protein or affect the dikinase domain of the enzyme dramatically reduce both the amount of phosphate in the amylopectin and the rate of starch degradation. Mature leaves of these mutants accumulate amounts of starch up to seven times greater than those in wild-type leaves. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C6 position.","STARCH EXCESS 1 (SEX1)","STARCH EXCESS 1 (SEX1); (SOP1); (SOP); (GWD1); (GWD)"]
["AT3G01180","tan","Starch synthase 2 involved in amylopectin metabolism.","STARCH SYNTHASE 2 (SS2)","STARCH SYNTHASE 2 (AtSS2);STARCH SYNTHASE 2 (SS2)"]
["AT1G11720","tan","Encodes a starch synthase that in addition to its role in starch biosynthesis also has a negative regulatory function in the biosynthesis of transient starch. The protein apparently contains a starch-binding domain (SBD).","STARCH SYNTHASE 3 (SS3)","STARCH SYNTHASE 3 (SS3)"]
["AT5G19690","tan","encodes an oligosaccharyl transferase involved response to high salt. Mutants are hypersensitive to high salt conditions The mRNA is cell-to-cell mobile.","STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A (STT3A)","STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A (STT3A)"]
["AT1G34130","tan","Encodes homolog of yeast STT3, a subunit of oligosaccharyltransferase.","STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE B (STT3B)","STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE B (STT3B)"]
["AT1G43800","tan","&#916;9 stearoyl-ACP desaturase which together with FAB2, AAD1, and AAD5 redundantly participates in oil storage during the maturation phase.","FLORAL TRANSITION AT THE MERISTEM1 (FTM1)","STEAROYL-ACYL CARRIER PROTEIN &#916;9-DESATURASE6 (SAD6);FLORAL TRANSITION AT THE MERISTEM1 (FTM1);HYPOXIA RESPONSE UNKNOWN PROTEIN 7 (HUP7);ACYL?ACYL CARRIER PROTEIN (ACP) DESATURASE 6 (AAD6)"]
["AT5G56040","tan","Member of ROOT MERISTEM GROWTH FACTOR family of peptide ligands.","STERILITY-REGULATING KINASE MEMBER 2 (SKM2)","STERILITY-REGULATING KINASE MEMBER 2 (SKM2);RGF1 INSENSITIVE 4 (RGI4)"]
["AT4G30620","tan","Homolog of STIC2, recent duplication.","STIC2 LIKE (STCL)","STIC2 LIKE (STCL)"]
["AT2G02480","tan","STICHEL mutant shows trichomes with fewer than normal branches.","STICHEL (STI)","STICHEL (STI)"]
["AT5G65590","tan","Encodes a plant-specific Dof-type transcription factor expressed in maturing guard cells, but not in guard mother cells. It regulates essential processes of stomatal guard cell maturation and functions as a key transcription factor regulating the final stages of guard cell differentiation.","STOMATAL CARPENTER 1 (SCAP1)","STOMATAL CARPENTER 1 (SCAP1)"]
["AT3G12630","tan","Encodes a protein with E3 ligase activity that acts as a positive regulator of stress responses in Arabidopsis.","STRESS ASSOCIATED PROTEIN 5 (SAP5)","STRESS ASSOCIATED PROTEIN 5 (SAP5)"]
["AT3G51420","tan","Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.","STRICTOSIDINE SYNTHASE-LIKE 4 (SSL4)","STRICTOSIDINE SYNTHASE-LIKE 4 (SSL4);STRICTOSIDINE SYNTHASE-LIKE 4 (ATSSL4)"]
["AT4G22130","tan","STRUBBELIG-receptor family 8;(source:Araport11)","STRUBBELIG-RECEPTOR FAMILY 8 (SRF8)","STRUBBELIG-RECEPTOR FAMILY 8 (SRF8)"]
["AT2G33290","tan","Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. Gene is expressed in rosettes, stems, floral buds, and flowers by RT-PCR.","SU(VAR)3-9 HOMOLOG 2 (SUVH2)","SU(VAR)3-9 HOMOLOG 2 (SUVH2);SET DOMAIN-CONTAINING PROTEIN 3 (SDG3); (ATSUVH2)"]
["AT5G13960","tan","Encodes a histone 3 lysine 9 specific methyltransferase involved in the maintenance of DNA methylation. SUVH4/KYP is a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. In kyp mutants, there is a loss of CpNpG methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the latter two. There is also evidence that KYP/SUVH4 might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres.","SU(VAR)3-9 HOMOLOG 4 (SUVH4)","SU(VAR)3-9 HOMOLOG 4 (SUVH4);SET DOMAIN PROTEIN 33 (SDG33);KRYPTONITE (KYP)"]
["AT4G34980","tan","Serine protease similar to subtilisin.","SUBTILISIN-LIKE SERINE PROTEASE 2 (SLP2)","SUBTILISIN-LIKE SERINE PROTEASE 2 (SLP2)"]
["AT2G19170","tan","Encodes a novel subtilisin-like serine protease.","SUBTILISIN-LIKE SERINE PROTEASE 3 (SLP3)","SUBTILISIN-LIKE SERINE PROTEASE 3 (SLP3)"]
["AT3G27380","tan","One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth.","SUCCINATE DEHYDROGENASE 2-1 (SDH2-1)","SUCCINATE DEHYDROGENASE 2-1 (SDH2-1)"]
["AT5G40650","tan","One of three isoforms of the iron-sulfur component of the succinate dehydrogenase complex, a component of the mitochondrial respiratory chain complex II. The product of the nuclear encoded gene is imported into the mitochondrion. Expressed during germination and post-germinative growth.","SUCCINATE DEHYDROGENASE 2-2 (SDH2-2)","SUCCINATE DEHYDROGENASE 2-2 (SDH2-2)"]
["AT5G09600","tan","Encodes one of the membrane anchor subunits of the mitochondrial respiratory complex II. The protein is encoded by the nuclear genome but is imported into the mitochondrion. There are two genes that encode this protein, the other is SDH3-2.","SUCCINATE DEHYDROGENASE 3-1 (SDH3-1)","SUCCINATE DEHYDROGENASE 3-1 (SDH3-1)"]
["AT4G32210","tan","Encodes one of the membrane anchor subunits of the mitochondrial respiratory complex II. The protein is encoded by the nuclear genome but is imported into the mitochondrion. There are two genes that encode this protein, the other is SDH3-1.","SUCCINATE DEHYDROGENASE 3-2 (SDH3-2)","SUCCINATE DEHYDROGENASE 3-2 (SDH3-2)"]
["AT1G47420","tan","predicted to encode subunit 5 of mitochondrial complex II and to participate in the respiratory chain","SUCCINATE DEHYDROGENASE 5 (SDH5)","SUCCINATE DEHYDROGENASE 5 (SDH5)"]
["AT1G08480","tan","Encodes subunit 6 of mitochondrial complex II (succinate dehydrogenase complex) and participates in the respiratory chain. It contributes to anchoring succinate dehydrogenase to the inner mitochondrial membrane. The mRNA is cell-to-cell mobile.","SUCCINATE DEHYDROGENASE 6 (SDH6)","SUCCINATE DEHYDROGENASE 6 (SDH6)"]
["AT3G47833","tan","predicted to encode subunit 7 of mitochondrial complex II and to participate in the respiratory chain","SUCCINATE DEHYDROGENASE 7 (SDH7)","SUCCINATE DEHYDROGENASE 7A (SDH7A);SUCCINATE DEHYDROGENASE 7 (SDH7)"]
["AT1G22710","tan","Encodes for a high-affinity transporter essential for phloem loading and long-distance transport. A major sucrose transporter, AtSUC2 can also transport a wide range of physiological and synthetic glucose conjugates with both &#945;- or &#946;-linkage.","SUCROSE-PROTON SYMPORTER 2 (SUC2)","SUCROSE-PROTON SYMPORTER 2 (SUC2);ARABIDOPSIS THALIANA SUCROSE-PROTON SYMPORTER 2 (ATSUC2);SUCROSE TRANSPORTER 1 (SUT1)"]
["AT1G19450","tan","Vacuolar sugar transporter; affects fructose signaling, plant organ development and stress tolerance.","SUGAR TRANSPORTER ERD6-LIKE 4 (ERDL4)","SUGAR TRANSPORTER ERD6-LIKE 4 (ERDL4)"]
["AT5G66170","tan","Encodes a thiosulfate sulfurtransferase/rhodanese.","SULFURTRANSFERASE 18 (STR18)","SULFURTRANSFERASE 18 (STR18)"]
["AT5G64340","tan","Encodes a bHLH(basic helix-loop-helix)-type transcription factor SAC51 [suppressor of acaulis 51]. Upregulation of SAC51 reverses the dwarf phenotype caused by a loss-of-function mutation in ACL5 (Arabidopsis thaliana ACAULIS 5) gene, suggesting that activation of SAC51 may lead to the expression of a subset of genes required for stem elongation.","SUPPRESSOR OF ACAULIS 51 (SAC51)","SUPPRESSOR OF ACAULIS 51 (SAC51)"]
["AT4G22300","tan","Formerly known as SOBER1, this locus was split in the TAIR10 annotation into AT4G22300 and AT4G22305. This locus is now known as TIPSY1 and AT4G22305 corresponds to SOBER1.","(TIPSY1)","SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1 (SOBER1); (TIPSY1)"]
["AT1G79820","tan","Major facilitator superfamily protein;(source:Araport11)","SUPPRESSOR OF G PROTEIN BETA1 (SGB1)","SUPPRESSOR OF G PROTEIN BETA1 (SGB1)"]
["AT5G23570","tan","Required for posttranscriptional gene silencing and natural virus resistance.SGS3 is a member of an 'unknown' protein family. Members of this family have predicted coiled coiled domains suggesting oligomerization and a potential zinc finger domain. Involved in the production of trans-acting siRNAs, through direct or indirect stabilization of cleavage fragments of the primary ta-siRNA transcript. Acts before RDR6 in this pathway. The mRNA is cell-to-cell mobile.","SUPPRESSOR OF GENE SILENCING 3 (SGS3)","SUPPRESSOR OF GENE SILENCING 3 (ATSGS3);SUPPRESSOR OF GENE SILENCING 3 (SGS3)"]
["AT1G71696","tan","Encodes a Putative Zn2+ carboxypeptidase, 4 splice variants have been identified but not characterized for different functions and/or expression patterns.SOL1 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol1 partially suppresses the short root phenotype caused by CLE19 overexpression.","SUPPRESSOR OF LLP1 1 (SOL1)","SUPPRESSOR OF LLP1 1 (SOL1)"]
["AT4G16890","tan","Encodes a Toll Interleukin1 receptor-nucleotide binding-Leu- rich repeat-type resistance gene (TIR-NB-LRR-type) involved in the salicylic acid-dependent defense response pathway. Mutant plants constitutively express pathogenesis-related (PR) genes and are pathogen resistant. Resistance signaling in snc1 requires EDS1, MOS3 and PAD4.","SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1 (SNC1)","SUPPRESSOR OF NPR1-1, CONSTITUTIVE 1 (SNC1);BALL (BAL)"]
["AT5G24300","tan","SSI is a plastidial enzyme and crucial for the synthesis of normal amylopectin in the leaves of Arabidopsis. The absence of SSI results in a deficiency in the number of shorter glucans which in turn affect the formation and connection of the amylopectin clusters in starch.","STARCH SYNTHASE 1 (SS1)","SUPPRESSOR OF SALICYLIC ACID INSENSITIVITY 1 (SSI1);SUPPRESSOR OF SALICYLIC ACID INSENSITIVE (SSI);STARCH SYNTHASE 1 (ATSS1);STARCH SYNTHASE 1 (SS1)"]
["AT2G24020","tan","STIC2 was identifided in a screen for suppressors of chloroplast protein import defect in tic40.","SUPPRESSOR OF TIC40 2 (STIC2)","SUPPRESSOR OF TIC40 2 (STIC2)"]
["AT3G05710","tan","Encodes a member of SYP4 Gene Family that is a plant ortholog of the Tlg2/syntaxin16 Qa-SNARE. Together with SYP42, it regulates the secretory and vacuolar transport pathways in the post-Golgi network and maintains the morphology of the Golgi apparatus and TGN and is required for extracellular resistance responses to a fungal pathogen.","SYNTAXIN OF PLANTS 43 (SYP43)","SYNTAXIN OF PLANTS 43 (SYP43); (ATSYP43)"]
["AT2G41800","tan","Encodes a DUF642 cell wall protein that is highly induced during the M/G1 phases of the cell cycle and is involved in hypocotyl cell elongation.","TEEBE, LONG IN THE MAYO-YOREME LANGUAGE (TEB)","TEEBE, LONG IN THE MAYO-YOREME LANGUAGE (TEB)"]
["AT4G18390","tan","Transcription factor which photomorphogenic growth by activating HY5 and HYH.","TEOSINTE BRANCHED 1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 2 (TCP2)","TEOSINTE BRANCHED 1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 2 (TCP2)"]
["AT5G48110","tan","The Col variant has no enzyme activity due to various substitution and deletion mutations.","TERPENE SYNTHASE 20 (TPS20)","TERPENE SYNTHASE 20 (TPS20)"]
["AT3G45600","tan","Member of TETRASPANIN family. During virus infection, the intact TET3 protein enhanced but GCCK/RP motif or cysteine residues-deficient TET3 variants abolished the cell-to-cell movement capability of virus.","TETRASPANIN3 (TET3)","TETRASPANIN3 (TET3)"]
["AT3G58620","tan","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. The TTL family is required for osmotic stress tolerance and male sporogenesis.","TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 4 (TTL4)","TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 4 (TTL4)"]
["AT2G18990","tan","thioredoxin-like/ATP-binding protein;(source:Araport11)","THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 HOMOLOG (TXND9)","THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 HOMOLOG (TXND9)"]
["AT3G02730","tan","Encodes a type-f thioredoxin. Has a role in the short-term activation of carbon metabolism. Loss affects growth under short-day conditions.","THIOREDOXIN F-TYPE 1 (TRXF1)","THIOREDOXIN F-TYPE 1 (TRXF1); (ATF1)"]
["AT1G50320","tan","encodes a prokaryotic thioredoxin","THIOREDOXIN X (THX)","THIOREDOXIN X (ATHX);THIOREDOXIN X (ATX);THIOREDOXIN X (THX)"]
["AT3G04520","tan","Encodes a threonine aldolase, involved in threonine degradation to glycine. Expressed in vascular tissue through out the plant.","THREONINE ALDOLASE 2 (THA2)","THREONINE ALDOLASE 2 (THA2)"]
["AT2G30440","tan","Encodes a thylakoidal processing peptidase that removes signal sequences from proteins synthesized in the cytoplasm and transported into the thylakoid lumen. The mRNA is cell-to-cell mobile.","THYLAKOID PROCESSING PEPTIDE (TPP)","THYLAKOID PROCESSING PEPTIDE (TPP);PLASTIDIC TYPE I SIGNAL PEPTIDASE 2B (PLSP2B)"]
["AT1G77490","tan","Encodes a chloroplastic thylakoid ascorbate peroxidase tAPX. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.","THYLAKOIDAL ASCORBATE PEROXIDASE (TAPX)","THYLAKOIDAL ASCORBATE PEROXIDASE (TAPX)"]
["AT4G34570","tan","Encodes a bifunctional dihydrofolate reductase - thymidylate synthase gene. This is unique in Arabidopsis and protozoa. Other organisms have independent genes for this function.","DIHYDROFOLATE REDUCTASE THYMIDYLATE SYNTHASE (DHFR-TS2)","THYMIDYLATE SYNTHASE 2 (THY-2); (ATDRTS2);DIHYDROFOLATE REDUCTASE THYMIDYLATE SYNTHASE (DHFR-TS2)"]
["AT4G32570","tan","TIFY family protein. Interacts with REV and functions as a repressor of leaf senescence.","TIFY DOMAIN PROTEIN 8 (TIFY8)","TIFY DOMAIN PROTEIN 8 (TIFY8)"]
["AT4G23440","tan","Disease resistance protein (TIR-NBS class);(source:Araport11)","TIR-NBS17 (TN17)","TIR-NBS17 (TN17)"]
["AT5G56220","tan","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","TIR-NBS21 (TN21)","TIR-NBS21 (TN21)"]
["AT5G44870","tan","Encodes LAZ5, a TIR-class NB-LRR R protein of unknown pathogen specificity with sequence similarity to RPS4, an R protein conferring resistance to Pseudomonas syringae expressing the effector AvrRPS4. Overexpression of LAZ5 results in hypersensitive cell death (plants did not survive to set seeds).","LAZARUS 5 (LAZ5)","TOLERANCE TO TOBACCO RINGSPOT VIRUS 1 (TTR1);LAZARUS 5 (LAZ5)"]
["AT2G20240","tan","GPI-anchored adhesin-like protein, putative (DUF3741);(source:Araport11)","TON1 RECRUITING MOTIF 17 (TRM17)","TON1 RECRUITING MOTIF 17 (TRM17)"]
["AT1G18620","tan","Member of a small gene family in Arabidopsis. Quadruple mutants in this family display defects in cell elongation.","TON1 RECRUITING MOTIF 3 (TRM3)","TON1 RECRUITING MOTIF 3 (TRM3);LONGIFOLIA 3 (LNG3);LONGIFOLIA 4 (LNG4)"]
["AT3G63430","tan","zinc finger CCCH domain protein;(source:Araport11)","TON1 RECRUITING MOTIF 5 (TRM5)","TON1 RECRUITING MOTIF 5 (TRM5)"]
["AT1G20840","tan","The protein encoded by this gene is found in the tonoplast (vacuole membrane) of Arabidopsis cells. The gene is expressed at highest levels in juvenile (sink) and adult (source) leaves, followed by flower tissues.","TONOPLAST MONOSACCHARIDE TRANSPORTER1 (TMT1)","TONOPLAST MONOSACCHARIDE TRANSPORTER1 (TMT1); (AtTMT1); (TST1)"]
["AT3G20780","tan","Encodes putative eukaryotic homolog of archaebacterial topoisomerase VI subunit B, TOP6B. Is essential for endoreduplication and is involved in cell expansion and cell proliferation. The hlq (harlequin) dwarf mutant has fewer root hair and leaf trichome. It has abnormal epidermal cell and accumulates callose.","TOPOISOMERASE 6 SUBUNIT B (TOP6B)","TOPOISOMERASE 6 SUBUNIT B (ATTOP6B);HARLEQUIN (HLQ);BRASSINOSTEROID INSENSITIVE 3 (BIN3);ELONGATED HYPOCOTYL 6 (HYP6);ROOT HAIRLESS 3 (RHL3);TOPOISOMERASE 6 SUBUNIT B (TOP6B)"]
["AT3G23890","tan","Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues.","TOPOISOMERASE II (TOPII)","TOPOISOMERASE II (TOPII); (ATTOPII)"]
["AT5G55540","tan","Encodes a large plant-specific protein of unknown function, with conserved domains also found in a variety of signaling proteins, In trn mutants, the leaf venation network had a severely reduced complexity: incomplete loops, no tertiary or quaternary veins, and vascular islands. The leaf laminas were asymmetric and narrow because of a severely reduced cell number. TRN1 is required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway.","TORNADO 1 (TRN1)","TORNADO 1 (TRN1);LOPPED 1 (LOP1)"]
["AT5G37780","tan","encodes a calmodulin that is involved in thigmomorphogenesis. Gene expression is rapidly induced upon a variety of abiotic stimuli, including water spray, subirrigation, wind, touch, wounding, or darkness.","CALMODULIN 1 (CAM1)","TOUCH 1 (TCH1);CALMODULIN 1 (CAM1); (ACAM-1)"]
["AT5G57560","tan","Encodes a cell wall-modifying enzyme, rapidly upregulated in response to environmental stimuli.","TOUCH 4 (TCH4)","TOUCH 4 (TCH4); (ATXTH22);XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 22 (XTH22)"]
["AT3G60750","tan","Transketolase involved in carbon fixation.","TRANSKETOLASE 1 (TKL1)","TRANSKETOLASE 1 (TKL1); (ATTKL1)"]
["AT3G09860","tan","Encodes a 12-kD essential component of the Translocon at the inner envelope membrane of chloroplasts that participates in preprotein translocation across the inner envelope membrane.","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 12 (TIC12)","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 12 (TIC12)"]
["AT3G18890","tan","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 62 (Tic62)","TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 62 (Tic62);TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 62 (AtTic62)"]
["AT3G24660","tan","member of Receptor kinase-like protein family","TRANSMEMBRANE KINASE-LIKE 1 (TMKL1)","TRANSMEMBRANE KINASE-LIKE 1 (TMKL1)"]
["AT4G00430","tan","a member of the plasma membrane intrinsic protein subfamily PIP1. involved redundantly with PIP1;1/2/3/5 in hydraulics and carbon fixation, regulates the expression of related genes that affect plant growth and development.","PLASMA MEMBRANE INTRINSIC PROTEIN 1;4 (PIP1;4)","TRANSMEMBRANE PROTEIN C (TMP-C);PLASMA MEMBRANE INTRINSIC PROTEIN 1;4 (PIP1;4);PLASMA MEMBRANE INTRINSIC PROTEIN 1E (PIP1E)"]
["AT2G37260","tan","Encodes a protein similar to WRKY transcription factors that is expressed in the seed integument and endosperm. Mutants are defective in proanthocyanidin synthesis and seed mucilate deposition. Seeds are yellow colored. Seed size is also affected; seeds are reduced in size but only when the mutant allele is transmitted through the female parent.Loss of function alleles are associated with a reduction in interploidy lethality.","TRANSPARENT TESTA GLABRA 2 (TTG2)","TRANSPARENT TESTA GLABRA 2 (TTG2); (ATWRKY44); (WRKY44);DR. STRANGELOVE 1 (DSL1)"]
["AT4G17770","tan","Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain. Phosphorylated TPS5 extracted from Arabidopsis cells binds directly to 14-3-3 isoforms. The mRNA is cell-to-cell mobile.","TREHALOSE PHOSPHATASE/SYNTHASE 5 (TPS5)","TREHALOSE PHOSPHATASE/SYNTHASE 5 (ATTPS5);TREHALOSE -6-PHOSPHATASE SYNTHASE S5 (TPS5);TREHALOSE PHOSPHATASE/SYNTHASE 5 (TPS5)"]
["AT5G03780","tan","Encodes a protein whose sequence is similar to human telomere proteins. This belongs to TRFL family 2, which do not show DNA binding in vitro.","TRF-LIKE 10 (TRFL10)","TRF-LIKE 10 (TRFL10)"]
["AT5G20680","tan","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","TRICHOME BIREFRINGENCE-LIKE 16 (TBL16)","TRICHOME BIREFRINGENCE-LIKE 16 (TBL16)"]
["AT5G01620","tan","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).TBL35 are required only for xylan 3-O-monoacetylation and 2,3-di-O-acetylation. The biochemical phenotype can be observed in tbl35 esk1, double mutant and tbl34 tbl35 esk1 triple mutants.","TRICHOME BIREFRINGENCE-LIKE 35 (TBL35)","TRICHOME BIREFRINGENCE-LIKE 35 (TBL35)"]
["AT5G20590","tan","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","TRICHOME BIREFRINGENCE-LIKE 5 (TBL5)","TRICHOME BIREFRINGENCE-LIKE 5 (TBL5)"]
["AT5G46110","tan","Encodes a chloroplast triose phosphate / 3-phosphoglycerate translocator that transports triose phosphates derived from the Calvin cycle in the stroma to the cytosol for use in sucrose synthesis and other biosynthetic processes. A tpt mutant has altered acclimation responses. The mRNA is cell-to-cell mobile.","ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2 (APE2)","TRIOSE-PHOSPHATE &#8260; PHOSPHATE TRANSLOCATOR (TPT);ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT 2 (APE2)"]
["AT2G21170","tan","Encodes a plastidic triose phosphate isomerase. Mutants with reduced pdTPI levels have difficulty transitioning from heterotrophic to autotrophic growth. The related phenotypes, such as chlorosis in light-grown seedlings may result from an accumulation of dihydroxyacetone phosphate (DHAP) and methylglyoxal (MG) in these mutants. Both splice variants appear to be expressed, but the At2g21170.2 variant appears to have a much narrower expression range limited to roots.","TRIOSEPHOSPHATE ISOMERASE (TIM)","TRIOSEPHOSPHATE ISOMERASE (TIM);PLASTID ISOFORM TRIOSE PHOSPHATE ISOMERASE (PDTPI)"]
["AT1G48175","tan","Cytidine/deoxycytidylate deaminase family protein;(source:Araport11)","EMBRYO DEFECTIVE 2191 (emb2191)","TRNA ADENOSINE DEAMINASE 2 (TAD2);EMBRYO DEFECTIVE 2191 (emb2191); (ATTAD2)"]
["AT2G26200","tan","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)","TRNA METHYLTRANSFERASE 140A (TRM140A)","TRNA METHYLTRANSFERASE 140A (TRM140A); (ATTRM140A)"]
["AT1G50010","tan","Encodes alpha-2,4 tubulin. TUA2 and TUA4 encode identical proteins. The mRNA is cell-to-cell mobile.","TUBULIN ALPHA-2 CHAIN (TUA2)","TUBULIN ALPHA-2 CHAIN (TUA2)"]
["AT1G04820","tan","Encodes an alpha tubulin isoform that is expressed in roots, leaves and flowers.","TUBULIN ALPHA-4 CHAIN (TUA4)","TUBULIN ALPHA-4 CHAIN (TUA4);TORTIFOLIA 2 (TOR2)"]
["AT4G14960","tan","Encodes an alpha-tubulin isoform required for right handed helical growth.","TUBULIN ALPHA-6 (TUA6)","TUBULIN ALPHA-6 (TUA6)"]
["AT5G23860","tan","beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers. The mRNA is cell-to-cell mobile.","TUBULIN BETA 8 (TUB8)","TUBULIN BETA 8 (TUB8)"]
["AT5G62690","tan","encodes tubulin beta-2/beta-3 chain The mRNA is cell-to-cell mobile.","TUBULIN BETA CHAIN 2 (TUB2)","TUBULIN BETA CHAIN 2 (TUB2)"]
["AT5G44340","tan","beta tubulin gene","TUBULIN BETA CHAIN 4 (TUB4)","TUBULIN BETA CHAIN 4 (TUB4)"]
["AT1G71440","tan","Encodes tubulin-folding cofactor E. Mutant embryos consist of one or a few grossly enlarged cells, surrounded by an endosperm that fails to cellularize and contains a few big nuclei.","PFIFFERLING (PFI)","TUBULIN-FOLDING COFACTOR E (TFC E);PFIFFERLING (PFI)"]
["AT1G80600","tan","Encodes HopW1-1-Interacting protein 1 (WIN1). Interacts with the P. syringae effector HopW1-1. WIN1 is a putative acetylornithine transaminase. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320). Mediates red-light inhibition of seed germination.","HOPW1-1-INTERACTING 1 (WIN1)","TUMOR PRONE 5 (TUP5);HOPW1-1-INTERACTING 1 (WIN1)"]
["AT5G49720","tan","Encodes a membrane-bound endo-1,4-beta-D-glucanase, involved in cellulose biosynthesis. Loss-of-function mutants have severe cellulose-deficient phenotypes. During cell elongation, KOR1 is associated with Golgi apparatus and early endosome. Inhibition of cellulose biosynthesis promoted a redistribution of KOR1 in subcellular locations. These observations suggest that deposition of cellulose involves the intracellular cycling of KOR1.","GLYCOSYL HYDROLASE 9A1 (GH9A1)","TUMOROUS SHOOT DEVELOPMENT 1 (TSD1);GLYCOSYL HYDROLASE 9A1 (ATGH9A1);GLYCOSYL HYDROLASE 9A1 (GH9A1);KORRIGAN (KOR);RADIALLY SWOLLEN 2 (RSW2);IRREGULAR XYLEM 2 (IRX2);KORRIGAN 1 (KOR1);DEFECTIVE CYTOKINESIS (DEC)"]
["AT1G16570","tan","Encodes a encodes a putative UDP-glycosyltransferase superfamily protein belonging to the glycosyltransferase (GT) family 33 that is localized to the endoplasmic reticulum. Loss of function alleles are male sterile, with pollen tubes bursting after germination. Loss of function also causes increased callose deposition in the female gametophyte, pollen tube overgrowth and reduced transmission.","TURAN (TUN)","TURAN (TUN)"]
["AT3G05580","tan","Encodes a Type One Protein Phosphatase that acts as a nucleocytoplasmic negative regulator of tip growth. Mutants affect pollen germination, pollen tube growth, and root hair growth. It acts genetically downstream of ANX1 (AT3G04690) and ANX2 (AT5G28680) and is functionally redundant with TOPP8 (AT5G27840).","TYPE ONE PROTEIN PHOSPHATASE 9 (TOPP9)","TYPE ONE PROTEIN PHOSPHATASE 9 (TOPP9);ATUNIS1 (AUN1)"]
["AT3G46820","tan","Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers.","TYPE ONE SERINE/THREONINE PROTEIN PHOSPHATASE 5 (TOPP5)","TYPE ONE SERINE/THREONINE PROTEIN PHOSPHATASE 5 (TOPP5)"]
["AT5G41700","tan","One of the polypeptides that constitute the ubiquitin-conjugating enzyme E2 The mRNA is cell-to-cell mobile.","UBIQUITIN CONJUGATING ENZYME 8 (UBC8)","UBIQUITIN CONJUGATING ENZYME 8 (UBC8);ARABIDOPSIS THALIANA UBIQUITIN CONJUGATING ENZYME 8 (ATUBC8)"]
["AT5G50870","tan","ubiquitin-conjugating enzyme 27;(source:Araport11)","UBIQUITIN-CONJUGATING ENZYME 27 (UBC27)","UBIQUITIN-CONJUGATING ENZYME 27 (UBC27)"]
["AT2G27860","tan","Encodes UDP-d-apiose/UDP-d-xylose synthase that requires NAD+ for enzymatic activity and is strongly inhibited by UDP-d-galacturonate.","UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 1 (AXS1)","UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 1 (AXS1)"]
["AT1G08200","tan","Encodes a putative UDP-D-apiose/UPD-D-xylose synthetase.","UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2 (AXS2)","UDP-D-APIOSE/UDP-D-XYLOSE SYNTHASE 2 (AXS2)"]
["AT4G00110","tan","Encodes a putative membrane-anchored UDP-D-glucuronate 4-epimerase.","UDP-D-GLUCURONATE 4-EPIMERASE 3 (GAE3)","UDP-D-GLUCURONATE 4-EPIMERASE 3 (GAE3)"]
["AT3G23820","tan","Encodes a UDP-D-glucuronate 4-epimerase involved in pectin biosynthesis in the cell wall and affects cell wall integrity and immunity to fungi and bacteria. The mRNA is cell-to-cell mobile.","UDP-D-GLUCURONATE 4-EPIMERASE 6 (GAE6)","UDP-D-GLUCURONATE 4-EPIMERASE 6 (GAE6)"]
["AT2G41490","tan","UDP-GlcNAc:dolichol phosphate N-acetylglucosamine-1-phosphate transferase","UDP-GLCNAC-ADOLICHOL PHOSPHATE GLCNAC-1-P-TRANSFERASE (GPT)","UDP-GLCNAC-ADOLICHOL PHOSPHATE GLCNAC-1-P-TRANSFERASE (GPT)"]
["AT3G56040","tan","UDP-glucose pyrophosphorylase 3;(source:Araport11)","UDP-GLUCOSE PYROPHOSPHORYLASE 3 (UGP3)","UDP-GLUCOSE PYROPHOSPHORYLASE 3 (UGP3)"]
["AT3G21750","tan","Encodes a glucosyltransferase that can attach glucose to a number of hydroxylated phenolic compounds as well as quercetins in vitro","UDP-GLUCOSYL TRANSFERASE 71B1 (UGT71B1)","UDP-GLUCOSYL TRANSFERASE 71B1 (UGT71B1)"]
["AT1G07250","tan","UDP-glucosyl transferase 71C4;(source:Araport11)","UDP-GLUCOSYL TRANSFERASE 71C4 (UGT71C4)","UDP-GLUCOSYL TRANSFERASE 71C4 (UGT71C4)"]
["AT5G59590","tan","UDP-glucosyl transferase 76E2;(source:Araport11)","UDP-GLUCOSYL TRANSFERASE 76E2 (UGT76E2)","UDP-GLUCOSYL TRANSFERASE 76E2 (UGT76E2)"]
["AT1G22340","tan","UDP-glucosyl transferase 85A7;(source:Araport11)","UDP-GLUCOSYL TRANSFERASE 85A7 (UGT85A7)","UDP-GLUCOSYL TRANSFERASE 85A7 (UGT85A7);UDP-GLUCOSYL TRANSFERASE 85A7 (AtUGT85A7)"]
["AT2G43840","tan","UGT74F1 transfers UDP:glucose to salicylic acid (forming a glucoside), benzoic acid, quercetin, and athranilate in vitro. UGT74F1 shows a weak ability to catalyze the formation of the p-aminobenzoate-glucose ester in vitro. But, UGT75B1 appears to be the dominant pABA acylglucosyltransferase in vivo based on assays in leaves, flowers, and siliques. The true biological substrate(s) of UGT74F1 are not known, but mutant plants lacking UGT74F1 have a decreased level of salicylate glucoside.","UDP-GLYCOSYLTRANSFERASE 74 F1 (UGT74F1)","UDP-GLYCOSYLTRANSFERASE 74 F1 (UGT74F1)"]
["AT4G09500","tan","Putative glycosyltransferase.","UDP-GLYCOSYLTRANSFERASE 79B7 (UGT79B7)","UDP-GLYCOSYLTRANSFERASE 79B7 (UGT79B7)"]
["AT1G76670","tan","Nucleotide-sugar transporter family protein;(source:Araport11)","UDP-RHA/UDP-GAL TRANSPORTER 1 (URGT1)","UDP-RHA/UDP-GAL TRANSPORTER 1 (URGT1)"]
["AT1G21070","tan","Nucleotide-sugar transporter family protein;(source:Araport11)","UDP-RHA/UDP-GAL TRANSPORTER 2 (URGT2)","UDP-RHA/UDP-GAL TRANSPORTER 2 (URGT2)"]
["AT5G42420","tan","Nucleotide-sugar transporter family protein;(source:Araport11)","UDP-RHA/UDP-GAL TRANSPORTER 3 (URGT3)","UDP-RHA/UDP-GAL TRANSPORTER 3 (URGT3)"]
["AT4G09810","tan","Nucleotide-sugar transporter family protein. Can function in yeast as glucose transporter.","UDP-RHA/UDP-GAL TRANSPORTER 5 (URGT5)","UDP-RHA/UDP-GAL TRANSPORTER 5 (URGT5)"]
["AT3G46440","tan","Encodes a cytosolic isoform of UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.","UDP-XYL SYNTHASE 5 (UXS5)","UDP-XYL SYNTHASE 5 (UXS5)"]
["AT2G47650","tan","Encodes a Golgi localized isoform of UDP-glucuronic acid decarboxylase. UDP-glucuronic acid decarboxylase produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.","UDP-XYLOSE SYNTHASE 4 (UXS4)","UDP-XYLOSE SYNTHASE 4 (UXS4)"]
["AT4G37180","tan","UIF1 is a nuclear and cytoplasmically localized myb-domain containing member of the GARP G2-like subfamily of transcription factors. Interacts with ULT1 and binds to the WUS promoter. UIF1 binding domains are also found in CUC and AG promoters suggesting they are also direct targets. This locus was also identified as a putative cytoskeletal protein in a yeast screen.","ULT1 INTERACTING FACTOR 1 (UIF1)","ULT1 INTERACTING FACTOR 1 (UIF1);HRS1 HOMOLOG5 (HHO5)"]
["AT1G14140","tan","Mitochondrial substrate carrier family protein;(source:Araport11)","UNCOUPLING PROTEIN 3 (UCP3)","UNCOUPLING PROTEIN 3 (UCP3)"]
["AT3G53990","tan","Encodes universal stress protein (USP). Functions as a molecular chaperone under heat shock and oxidative stress conditions. Chaperone activity and assembly into complexes is redox regulated.","UNIVERSAL STRESS PROTEIN (ATUSP)","UNIVERSAL STRESS PROTEIN (ATUSP); (USP17)"]
["AT1G16750","tan","GPI-anchored adhesin-like protein, putative (Protein of unknown function, DUF547);(source:Araport11)",null,"UNKNOWN TRANSCRIPTION FACTOR 1 (UKTF1)"]
["AT2G03590","tan","Encodes a member of a class of allantoin transporters.","UREIDE PERMEASE 1 (UPS1)","UREIDE PERMEASE 1 (ATUPS1);UREIDE PERMEASE 1 (UPS1)"]
["AT4G26510","tan","One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.","URIDINE KINASE-LIKE 4 (UKL4)","URIDINE KINASE-LIKE 4 (UKL4);URIDINE/CYTIDINE KINASE 4 (UCK4)"]
["AT1G05620","tan","Encodes a cytosolic inosine nucleoside hydrolase. It forms a heterocomplex with NSH1 with almost two orders of magnitude higher catalytic efficiency for xanthosine hydrolysis than observed for NSH1 alone. Transcript levels for this gene are elevated in older leaves suggesting that it may play a role in purine catabolism during senescence.","URIDINE-RIBOHYDROLASE 2 (URH2)","URIDINE-RIBOHYDROLASE 2 (URH2);NUCLEOSIDE HYDROLASE 2 (NSH2)"]
["AT4G19185","tan","nodulin MtN21-like transporter family protein","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 2 (UMAMIT2)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 2 (UMAMIT2)"]
["AT4G01450","tan","nodulin MtN21-like transporter family protein","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 30 (UMAMIT30)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 30 (UMAMIT30)"]
["AT4G23710","tan","vacuolar ATP synthase subunit G2;(source:Araport11)","VACUOLAR ATP SYNTHASE SUBUNIT G2 (VAG2)","VACUOLAR ATP SYNTHASE SUBUNIT G2 (VAG2);VACUOLAR ATP SYNTHASE SUBUNIT G2 (VATG2); (VHA-G2)"]
["AT1G75630","tan","vacuolar H+-pumping ATPase 16 kD proteolipid (ava-p) mRNA, The mRNA is cell-to-cell mobile.","VACUOLAR H+-PUMPING ATPASE 16 KDA PROTEOLIPID SUBUNIT 4 (AVA-P4)","VACUOLAR H+-PUMPING ATPASE 16 KDA PROTEOLIPID SUBUNIT 4 (AVA-P4)"]
["AT3G01390","tan","Subunit G of the vacuolar membrane ATPAse complex","VACUOLAR MEMBRANE ATPASE 10 (VMA10)","VACUOLAR MEMBRANE ATPASE 10 (VMA10); (AVMA10)"]
["AT2G21410","tan","Vacuolar proton ATPase subunit VHA-a isoform 2. Localized in the tonoplast. Required for efficient nutrient storage but not for sodium accumulation.","VACUOLAR PROTON ATPASE A2 (VHA-A2)","VACUOLAR PROTON ATPASE A2 (VHA-A2)"]
["AT4G39080","tan","Vacuolar proton ATPase subunit VHA-a isoform 3. Localized in the tonoplast. The mRNA is cell-to-cell mobile.","VACUOLAR PROTON ATPASE A3 (VHA-A3)","VACUOLAR PROTON ATPASE A3 (VHA-A3)"]
["AT5G16290","tan","Encodes a regulatory subunit of acetohydroxy acid synthase (AHAS), the &#64257;rst committed enzyme in the branched chain amino acid biosynthesis pathway.","VALINE-TOLERANT 1 (VAT1)","VALINE-TOLERANT 1 (VAT1);ALS-INTERACTING PROTEIN3 (AIP3);ACETOLACTATE SYNTHASE SMALL SUBUNIT 2 (AHASS2)"]
["AT1G57820","tan","Encodes a 645-amino acid methylcytosine-binding protein with a PHD domain, two RING finger domains, and an SRA domain that is involved in centromere heterochromatinization. This protein functions as an E3 ubiquitin ligase in vitro. The protein has been shown to bind to methylated cytosines of CG, CNG and CNN motifs via its SRA domain but has a preference for the former. It plays a role in the establishment/maintenance of chromatin structure during cell division and is localized in the nucleus. Plants over-expressing VIM1/ORTH2 show an inhibition in root growth and a delay in flowering. Both over-expression of GFP:ORTH2 and loss of ORTH2/VIM1 lead to decreased levels of DNA methylation. GFP:ORTH2 over-expressers also have increased levels of FWA transcripts.","VARIANT IN METHYLATION 1 (VIM1)","VARIANT IN METHYLATION 1 (VIM1);ORTHRUS 2 (ORTH2)"]
["AT5G46520","tan","VICTR (VARIATION IN COMPOUND TRIGGERED ROOT growth response) encodes a TIR-NB-LRR (for Toll-Interleukin1 Receptor-nucleotide binding-Leucine-rich repeat) protein. VICTR is necessary for DFPM-induced root growth arrest and inhibition of abscisic acid-induced stomatal closing (DFPM is [5-(3,4-dichlorophenyl)furan-2-yl]-piperidine-1-ylmethanethione)(PMID:21620700). DFPM-mediated root growth arrest is accession-specific and depends on EDS1 and PAD4; Col-0 has a functional copy of VICTR. Induction of the VICTR gene by DFPM treatment requires functional VICTR (Col). A close homolog to VICTR, named VICTL (At5g46510) lies in tandem with VICTR.The mRNA is cell-to-cell mobile.","VARIATION IN COMPOUND TRIGGERED ROOT GROWTH RESPONSE (VICTR)","VARIATION IN COMPOUND TRIGGERED ROOT GROWTH RESPONSE (VICTR);ACQUIRED OSMOTOLERANCE (ACQOS)"]
["AT1G20260","tan","One of three genes encoding the vacuolar ATP synthase subunit B1. The protein binds to and co-localizes with F-actin, bundles F-actin to form higher-order structure, and stabilizes actin filaments in vitro. The mRNA is cell-to-cell mobile.","V-ATPASE B SUBUNIT 3 (VAB3)","V-ATPASE B SUBUNIT 3 (VAB3); (ATVAB3)"]
["AT4G30200","tan","Encodes a protein with similarity to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain. VEL1 is a part of a polycomb repressive complex (PRC2) that is involved in epigenetic silencing of the FLC flowering locus.","VERNALIZATION5/VIN3-LIKE 1 (VEL1)","VERNALIZATION5/VIN3-LIKE 1 (VEL1);VIN3-LIKE 2 (VIL2)"]
["AT1G77580","tan","filament-like protein (DUF869);(source:Araport11)","VESICLE TETHERING 3 (VETH3)","VESICLE TETHERING 3 (VETH3)"]
["AT4G32150","tan","AtVAMP711 is a member of Synaptobrevin-like AtVAMP7C, v-SNARE (soluble N-ethyl-maleimide sensitive factor attachment protein receptors) protein family. SNAREs have been divided into four subgroups: Qa-, Qb-, Qc- and R-SNAREs. R-SNAREs are classified into three groups, the Sec22-, YKT6- and VAMP7-like R-SNAREs. One R-SNARE and three Q-SNAREs (one of each subgroup) form the trans-SNARE complex, which governs specific membrane fusions. VAMP7 proteins consist of three distinct domain, the N-terminal longin-domain (LD), the SNARE motif (SNM) and a transmembrane domain. In spite of the high similarities among the VAMP7 proteins, they show different subcellular localizations. VAMP7C is vacuolar-localized and its LD is essential for the correct localization. Generally, it is suggested that the complete LD is the determinant of subcellular sorting in both animal and plant R-SNAREs.","VESICLE-ASSOCIATED MEMBRANE PROTEIN 711 (VAMP711)","VESICLE-ASSOCIATED MEMBRANE PROTEIN 711 (VAMP711);VESICLE-ASSOCIATED MEMBRANE PROTEIN 711 (ATVAMP711)"]
["AT3G24890","tan","member of VAMP72 Gene Family","VESICLE-ASSOCIATED MEMBRANE PROTEIN 728 (VAMP728)","VESICLE-ASSOCIATED MEMBRANE PROTEIN 728 (VAMP728)"]
["AT2G41740","tan","Encodes a protein with high homology to animal villin.","VILLIN 2 (VLN2)","VILLIN 2 (VLN2); (ATVLN2)"]
["AT2G35880","tan","Microtubule-stabilizing protein. Expression is regulated by ethylene and it is a direct target of EIN3.During apical hook formation, it acts to modulate auxin maxima by regulating PIN traffiking.","WAVE-DAMPENED2-LIKE4 (WDL4)","WAVE-DAMPENED2-LIKE4 (WDL4)"]
["AT5G54200","tan","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)","WD40-DOMAIN 1 (WDD1)","WD40-DOMAIN 1 (WDD1)"]
["AT1G51500","tan","Encodes an ABC transporter involved in cuticular wax biosynthesis. Lines carrying recessive mutations in this locus have weakly glaucous stem surface, and relative elevated secondary alcohols and ketones.","ATP-BINDING CASSETTE G12 (ABCG12)","WHITE-BROWN COMPLEX 12 (WBC12);ATP-BINDING CASSETTE G12 (ABCG12); (D3);ECERIFERUM 5 (CER5);ARABIDOPSIS THALIANA WHITE-BROWN COMPLEX 12 (ATWBC12); (AtABCG12)"]
["AT1G64630","tan","with no lysine (K) kinase 10;(source:Araport11)","WITH NO LYSINE (K) KINASE 10 (WNK10)","WITH NO LYSINE KINASE 10 (ATWNK10);WITH NO LYSINE (K) KINASE 10 (WNK10)"]
["AT1G10200","tan","Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization.","WLIM1 (WLIM1)","WLIM1 (WLIM1); (ATWLIM1)"]
["AT2G39900","tan","Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization.","WLIM2A (WLIM2a)","WLIM2A (WLIM2a)"]
["AT3G55770","tan","Encodes a member of the Arabidopsis LIM proteins: a family of actin bundlers with distinct expression patterns. WLIM1, WLIM2a, and WLIM2b are widely expressed, whereas PLIM2a, PLIM2b, and PLIM2c are predominantly expressed in pollen. Regulates actin cytoskeleton organization.","WLIM2B (WLIM2b)","WLIM2B (WLIM2b)"]
["AT1G79430","tan","Encodes gene product that is required for several aspects of phloem development in the root: (1) the specific divisions organizing the phloem pole, (2) sieve element differentiation and (3) the expression of a companion-specific gene. Mutant has a defect in the organization of phloem poles in the root. apl seedlings have a short, determinate root with only occasional lateral branches.","ALTERED PHLOEM DEVELOPMENT (APL)","WOODY (WDY);ALTERED PHLOEM DEVELOPMENT (APL)"]
["AT5G43070","tan","WPP family members contains an NE targeting domain. This domain, called the WPP domain after a highly conserved Trp-Pro-Pro motif, is necessary and sufficient for NE targeting of WPP1. RNAi suppression of WPP1 resulted in reduced mitotic activity.","WPP DOMAIN PROTEIN 1 (WPP1)","WPP DOMAIN PROTEIN 1 (WPP1)"]
["AT4G31550","tan","member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae.","WRKY DNA-BINDING PROTEIN 11 (WRKY11)","WRKY DNA-BINDING PROTEIN 11 (WRKY11); (AtWRKY11)"]
["AT5G56270","tan","Encodes WRKY transcription factor 2, a zinc-finger protein. In wrky2 mutants, egg cells polarize normally but zygotes fail to reestablish polar organelle positioning from a transient symmetric state, resulting in equal cell division and distorted embryo development.","WRKY DNA-BINDING PROTEIN 2 (WRKY2)","WRKY DNA-BINDING PROTEIN 2 (WRKY2);ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 2 (ATWRKY2)"]
["AT2G30590","tan","Encodes WRKY DNA-binding protein 21 (WRKY21).","WRKY DNA-BINDING PROTEIN 21 (WRKY21)","WRKY DNA-BINDING PROTEIN 21 (WRKY21)"]
["AT3G04630","tan","Member of a small gene family which have a KLEEK domain which may be involved in protein- protein interactions. Over expression of WDL1 results in abnormal root development.","WVD2-LIKE 1 (WDL1)","WVD2-LIKE 1 (WDL1)"]
["AT2G28840","tan","Putative E3 Ub protein ligase; regulates thermoresponsive hypocotyl growth through mediating degradation of the thermosensor ELF3.","XB3 ORTHOLOG 1 IN ARABIDOPSIS THALIANA (XBAT31)","XB3 ORTHOLOG 1 IN ARABIDOPSIS THALIANA (XBAT31)"]
["AT3G18000","tan","Encodes a N-methyltransferase-like protein. Double mutants of NMT1 and NMT3 are defective in leaf, root, flower, seed, and pollen development.","XIPOTL 1 (XPL1)","XIPOTL 1 (XPL1);N-METHYLTRANSFERASE 1 (NMT1); (PEAMT1); (DPR2);PHOSPHOETHANOLAMINE METHYLTRANSFERASE1 (ATPMT1); (PEAMT)"]
["AT4G25810","tan","xyloglucan endotransglycosylase-related protein (XTR6)","XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6 (XTR6)","XYLOGLUCAN ENDOTRANSGLYCOSYLASE 6 (XTR6);XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 23 (XTH23)"]
["AT1G18690","tan","Galactosyl transferase GMA12/MNN10 family protein;(source:Araport11)","XYLOGLUCAN XYLOSYLTRANSFERASE 4 (XXT4)","XYLOGLUCAN XYLOSYLTRANSFERASE 4 (XXT4)"]
["AT5G49650","tan","Encodes a cytosolic protein capable of phosphorylating xylulose and deoxy-xylulose. It most likely plays a role in producing precursors for isoprenoid biosynthesis.","XYLULOSE KINASE-2 (XK-2)","XYLULOSE KINASE 2 (XK2);XYLULOSE KINASE-2 (XK-2)"]
["AT2G25870","tan","Encodes an endoribonuclease that is required for chloroplast rRNA processing.","YBEY ENDORIBONUCLEASE (ATYBEY)","YBEY ENDORIBONUCLEASE (ATYBEY)"]
["AT5G53550","tan","YELLOW STRIPE like 3;(source:Araport11)","YELLOW STRIPE LIKE 3 (YSL3)","YELLOW STRIPE LIKE 3 (ATYSL3);YELLOW STRIPE LIKE 3 (YSL3)"]
["AT3G17650","tan","Arabidopsis thaliana metal-nicotianamine transporter YSL5","YELLOW STRIPE LIKE 5 (YSL5)","YELLOW STRIPE LIKE 5 (YSL5);PIGMENT DEFECTIVE 321 (PDE321)"]
["AT1G48370","tan","Arabidopsis thaliana metal-nicotianamine transporter YSL4","YELLOW STRIPE LIKE 8 (YSL8)","YELLOW STRIPE LIKE 8 (YSL8)"]
["AT1G69600","tan","Encodes ZFHD1, a member of the zinc finger homeodomain transcriptional factor family. Binds to the 62 bp promoter region of ERD1 (early responsive to dehydration stress 1). Expression of ZFHD1 is induced by drought, high salinity and abscisic acid.","ZINC FINGER HOMEODOMAIN 1 (ZFHD1)","ZINC FINGER HOMEODOMAIN 1 (ZFHD1);ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 29 (ATHB29);ZINC FINGER HOMEODOMAIN 11 (ZHD11)"]
["AT3G02830","tan","Encodes a zinc finger protein that binds to PORA mRNA in vivo and recruits the Pfr form of phytochrome to the 5&#8242;-UTR of PORA mRNA to regulate translation of the mRNA.","ZINC FINGER PROTEIN 1 (ZFN1)","ZINC FINGER PROTEIN 1 (ZFN1);PENTA 1 (PNT1); (ATC3H33)"]
["AT4G17810","tan","C2H2 domain regulatory protein. Functions downstream of GL2 during root hair development and regulates expression of targets RDH6, RSL2 and RSL4.","ZINC FINGER PROTEIN 1 (ZP1)","ZINC FINGER PROTEIN 1 (ZP1);EMBRYO DEFECTIVE 3022 (EMB3022)"]
["AT2G41940","tan","Encodes a zinc finger protein containing only a single zinc finger. Together with GIS and GIS2 plays partially redundant and essential role in inflorescence trichome initiation and in its regulation by GA and cytokinins.","ZINC FINGER PROTEIN 8 (ZFP8)","ZINC FINGER PROTEIN 8 (ZFP8);ZINC FINGER PROTEIN8 (ZFP8)"]
["AT5G13740","tan","Encodes ZIF1 (ZINC-INDUCED FACILITATOR1), a member of the Major Facilitator Superfamily (MFS) of membrane proteins which are found in all organisms and transport a wide range of small, organic molecules. Involved in a mechanism of Zn sequestration, possibly by transport of a Zn ligand or Zn-ligand complex into vacuoles. The mRNA is cell-to-cell mobile.","ZINC INDUCED FACILITATOR 1 (ZIF1)","ZINC INDUCED FACILITATOR 1 (ZIF1)"]
["AT4G16380","tan",{"$error":"#N/A"},{"$error":"#N/A"},{"$error":"#N/A"}]
["AT3G10210","turquoise","SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein;(source:Araport11)"]
["AT5G15845","turquoise","Natural antisense transcript overlaps with AT5G15850;(source:Araport11)"]
["AT5G17690","turquoise","Regulates the meristem response to light signals and the maintenance of inflorescence meristem identity. Influences developmental processes controlled by APETALA1. TFL2 silences specific genes within euchromatin but not genes positioned in heterochromatin. TFL2 protein localized preferentially to euchromatic regions and not to heterochromatic chromocenters. Involved in euchromatin organization. Required for epigenetic maintenance of the vernalized state."]
["AT3G54100","turquoise","O-fucosyltransferase family protein;(source:Araport11)"]
["AT1G11100","turquoise","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein;(source:Araport11)"]
["AT5G10950","turquoise","Tudor/PWWP/MBT superfamily protein;(source:Araport11)"]
["AT4G19390","turquoise","Uncharacterized protein family (UPF0114);(source:Araport11)"]
["AT3G58590","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G20970","turquoise","calponin-like domain protein;(source:Araport11)"]
["AT5G51730","turquoise","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT1G12440","turquoise","A20/AN1-like zinc finger family protein;(source:Araport11)"]
["AT1G70590","turquoise","F-box family protein;(source:Araport11)"]
["AT4G30750","turquoise","hypothetical protein;(source:Araport11)"]
["AT2G36480","turquoise","pre-mRNA cleavage complex 2 Pcf11-like protein;(source:Araport11)"]
["AT1G77010","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT4G31408","turquoise","None;(source:Araport11)"]
["AT2G35900","turquoise","Mal d 1-associated protein;(source:Araport11)"]
["AT3G62330","turquoise","Zinc knuckle (CCHC-type) family protein;(source:Araport11)"]
["AT3G48800","turquoise","Sterile alpha motif (SAM) domain-containing protein;(source:Araport11)"]
["AT5G01445","turquoise","hypothetical protein;(source:Araport11)"]
["AT5G41770","turquoise","crooked neck protein, putative / cell cycle protein;(source:Araport11)"]
["AT4G13180","turquoise","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT5G37350","turquoise","Serine/threonine-protein kinase Rio1;(source:Araport11)"]
["AT1G04390","turquoise","BTB/POZ domain-containing protein;(source:Araport11)"]
["AT1G52640","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G23340","turquoise","RNI-like superfamily protein;(source:Araport11)"]
["AT1G15430","turquoise","hypothetical protein (DUF1644);(source:Araport11)"]
["AT4G36515","turquoise","trichohyalin-like protein;(source:Araport11)"]
["AT5G66420","turquoise","TIM-barrel signal transduction protein;(source:Araport11)"]
["AT3G45190","turquoise","SIT4 phosphatase-associated family protein;(source:Araport11)"]
["AT2G30990","turquoise","arginine N-methyltransferase, putative (DUF688);(source:Araport11)"]
["AT3G09850","turquoise","D111/G-patch domain-containing protein;(source:Araport11)"]
["AT5G57950","turquoise","26S proteasome regulatory subunit;(source:Araport11)"]
["AT2G45600","turquoise","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT1G17145","turquoise","RING/U-box superfamily protein;(source:Araport11)"]
["AT3G07530","turquoise","integrator complex subunit;(source:Araport11)"]
["AT5G01935","turquoise","Natural antisense transcript overlaps with AT5G12380;(source:Araport11)"]
["AT3G28030","turquoise","Required for repair of pyrimidine-pyrimidinone (6-4) dimers.The mRNA is cell-to-cell mobile."]
["AT3G12860","turquoise","NOP56-like pre RNA processing ribonucleoprotein;(source:Araport11)"]
["AT3G53940","turquoise","Mitochondrial substrate carrier family protein;(source:Araport11)"]
["AT1G74370","turquoise","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G01448","turquoise","Natural antisense transcript overlaps with AT1G01450;(source:Araport11)"]
["AT1G56610","turquoise","Protein with RNI-like/FBD-like domain;(source:Araport11)"]
["AT2G19260","turquoise","RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11)"]
["AT4G33200","turquoise","member of Myosin-like proteins"]
["AT3G21690","turquoise","MATE efflux family protein;(source:Araport11)"]
["AT5G53260","turquoise","Seed maturation protein;(source:Araport11)"]
["AT2G05250","turquoise","DNAJ heat shock N-terminal domain-containing protein;(source:Araport11)"]
["AT5G45660","turquoise","adenine phosphoribosyltransferase;(source:Araport11)"]
["AT5G01010","turquoise","retinal-binding protein;(source:Araport11)"]
["AT1G27170","turquoise","transmembrane receptors / ATP binding protein;(source:Araport11)"]
["AT4G14000","turquoise","Putative methyltransferase family protein;(source:Araport11)"]
["AT3G54980","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G06920","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G70518","turquoise","other_RNA;(source:Araport11)"]
["AT4G24100","turquoise","Protein kinase superfamily protein"]
["AT3G42860","turquoise","zinc knuckle (CCHC-type) family protein;(source:Araport11)"]
["AT1G68340","turquoise","hypothetical protein (DUF1639);(source:Araport11)"]
["AT4G18660","turquoise","delay of germination protein;(source:Araport11)"]
["AT2G01080","turquoise","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11)"]
["AT1G76580","turquoise","Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein;(source:Araport11)"]
["AT4G30990","turquoise","ARM repeat superfamily protein;(source:Araport11)"]
["AT2G46040","turquoise","Encodes a transcriptional activator that is involved in pollen development. ARID1 is expressed in nuclear bodies of microspore, vegetative and generative cells, and binds to and activates DUO during microgametogenesis."]
["AT4G18220","turquoise","Drug/metabolite transporter superfamily protein;(source:Araport11)"]
["AT3G26770","turquoise","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT1G23052","turquoise","other_RNA;(source:Araport11)"]
["AT4G21500","turquoise","transmembrane protein;(source:Araport11)"]
["AT2G23980","turquoise","Encodes a cyclic GMP-activated non-selective cation channel in the plasma membrane of guard cells. Required for constitutive growth of root hairs as Ca2+-permeable channels. Regulates Ca2+ infux during heat shock."]
["AT1G78550","turquoise","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT1G64795","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G47330","turquoise","methyltransferase, putative (DUF21);(source:Araport11)"]
["AT1G11020","turquoise","RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11)"]
["AT1G21160","turquoise","eukaryotic translation initiation factor 2 (eIF-2) family protein;(source:Araport11)"]
["AT1G03365","turquoise","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G33400","turquoise","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones."]
["AT2G45480","turquoise","Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development."]
["AT4G15020","turquoise","hAT transposon superfamily;(source:Araport11)"]
["AT5G28830","turquoise","calcium-binding EF hand family protein;(source:Araport11)"]
["AT5G14120","turquoise","Major facilitator superfamily protein;(source:Araport11)"]
["AT1G71210","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G08535","turquoise","D111/G-patch domain-containing protein;(source:Araport11)"]
["AT3G10390","turquoise","Encodes a plant homolog of a SWIRM domain containing protein found in histone deacetylase complexes in mammals. Lesions in FLD result in hyperacetylation of histones in FLC chromatin, up-regulation of FLC expression and extremely delayed flowering. FLD plays a key role in regulating the reproductive competence of the shoot and results in different developmental phase transitions in Arabidopsis."]
["AT1G53600","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G52220","turquoise","leukocyte immunoglobulin-like receptor family A protein;(source:Araport11)"]
["AT5G16420","turquoise","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)"]
["AT4G35240","turquoise","DNA-directed RNA polymerase subunit beta, putative (DUF630 and DUF632);(source:Araport11)"]
["AT3G46668","turquoise","None;(source:Araport11)"]
["AT2G21195","turquoise","hypothetical protein;(source:Araport11)"]
["AT2G17787","turquoise","cylicin;(source:Araport11)"]
["AT1G04985","turquoise","triacylglycerol lipase-like protein;(source:Araport11)"]
["AT4G24660","turquoise","homeobox protein 22;(source:Araport11)"]
["AT1G70780","turquoise","hypothetical protein;(source:Araport11)"]
["AT4G27530","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G13050","turquoise","proline-rich receptor-like kinase;(source:Araport11)"]
["AT5G06330","turquoise","Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family;(source:Araport11)"]
["AT3G13210","turquoise","crooked neck protein, putative / cell cycle protein;(source:Araport11)"]
["AT2G13420","turquoise","Possibly not a pseudogene based on evidence for transcription (RNA-seq) and translation (Ribo-seq) described in PMID:27791167"]
["AT2G03975","turquoise","Natural antisense transcript overlaps with AT2G01410;(source:Araport11)"]
["AT5G62650","turquoise","Tic22-like family protein;(source:Araport11)"]
["AT1G67340","turquoise","HCP-like superfamily protein with MYND-type zinc finger;(source:Araport11)"]
["AT4G37880","turquoise","LisH/CRA/RING-U-box domains-containing protein;(source:Araport11)"]
["AT4G38940","turquoise","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT5G25500","turquoise","exosome complex exonuclease;(source:Araport11)"]
["AT1G07170","turquoise","Similar to human splicing factor 3b, 14 kda subunit, SF3b14b."]
["AT5G22690","turquoise","Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11)"]
["AT4G14520","turquoise","DNA-directed RNA polymerase II-like protein;(source:Araport11)"]
["AT5G27460","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G15630","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G63280","turquoise","C2H2-like zinc finger protein;(source:Araport11)"]
["AT4G18905","turquoise","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT1G10865","turquoise","cytochrome C oxidase assembly factor;(source:Araport11)"]
["AT1G68930","turquoise","pentatricopeptide (PPR) repeat-containing protein;(source:Araport11)"]
["AT3G27990","turquoise","None;(source:Araport11)"]
["AT1G02610","turquoise","RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11)"]
["AT1G80040","turquoise","ubiquitin system component Cue;(source:Araport11)"]
["AT2G17110","turquoise","DNA-directed RNA polymerase subunit beta, putative (DUF630 and DUF632);(source:Araport11)"]
["AT3G48710","turquoise","DEK domain-containing chromatin associated protein;(source:Araport11)"]
["AT3G57580","turquoise","F-box and associated interaction domains-containing protein;(source:Araport11)"]
["AT5G13440","turquoise","Ubiquinol-cytochrome C reductase iron-sulfur subunit;(source:Araport11)"]
["AT3G28700","turquoise","NADH dehydrogenase ubiquinone complex I, assembly factor-like protein (DUF185);(source:Araport11)"]
["AT1G24267","turquoise","bZIP transcription factor, putative (DUF1664);(source:Araport11)"]
["AT5G12310","turquoise","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G30200","turquoise","F-box family protein;(source:Araport11)"]
["AT3G09040","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G15970","turquoise","NUP50 (Nucleoporin 50 kDa) protein;(source:Araport11)"]
["AT2G20320","turquoise","DENN (AEX-3) domain-containing protein;(source:Araport11)"]
["AT5G24740","turquoise","Encodes a vacuolar sorting protein that interacts with the plant-specific GRAS family transcription factor SHORT-ROOT and acts in a pathway that controls root growth and radial patterning. It provides a connections between gibberellic acid, SHR and PLT signaling in the root."]
["AT1G05380","turquoise","Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein;(source:Araport11)"]
["AT3G58630","turquoise","sequence-specific DNA binding transcription factor;(source:Araport11)"]
["AT1G80020","turquoise","transposable_element_gene;(source:Araport11);hAT-like transposase family (hobo/Ac/Tam3), has a 5.0e-62 P-value blast match to GB:AAD24567 transposase Tag2 (hAT-element) (Arabidopsis thaliana);(source:TAIR10)"]
["AT2G44310","turquoise","Calcium-binding EF-hand family protein;(source:Araport11)"]
["AT1G64610","turquoise","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT1G27900","turquoise","RNA helicase family protein;(source:Araport11)"]
["AT5G06811","turquoise","transcription termination factor family protein;(source:Araport11)"]
["AT1G60730","turquoise","NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11)"]
["AT3G27330","turquoise","zinc finger (C3HC4-type RING finger) family protein;(source:Araport11)"]
["AT2G13547","turquoise","hypothetical protein;(source:Araport11)"]
["AT5G57035","turquoise","U-box domain-containing protein kinase family protein;(source:Araport11)"]
["AT2G17670","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G52380","turquoise","NUP50 (Nucleoporin 50 kDa) protein;(source:Araport11)"]
["AT3G47940","turquoise","DNAJ heat shock family protein;(source:Araport11)"]
["AT5G54540","turquoise","Uncharacterized conserved protein (UCP012943);(source:Araport11)"]
["AT3G19990","turquoise","E3 ubiquitin-protein ligase;(source:Araport11)"]
["AT4G33940","turquoise","RING/U-box superfamily protein;(source:Araport11)"]
["AT2G36780","turquoise","UDP-Glycosyltransferase superfamily protein;(source:Araport11)"]
["AT1G73320","turquoise","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT4G22530","turquoise","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT5G16380","turquoise","autophagy-like protein, putative (Protein of unknown function, DUF538);(source:Araport11)"]
["AT3G22980","turquoise","Ribosomal protein S5/Elongation factor G/III/V family protein;(source:Araport11)"]
["AT2G27090","turquoise","bZIP transcription factor (DUF630 and DUF632);(source:Araport11)"]
["AT4G25707","turquoise","This gene encodes a small protein and has either evidence of transcription or purifying selection."]
["AT1G21680","turquoise","DPP6 N-terminal domain-like protein;(source:Araport11)"]
["AT3G09370","turquoise","C-myb-like transcription factor (MYB3R3) mRNA. It is a target of CDK phosphorylation and blocks cell division in response to DNA damage."]
["AT3G03341","turquoise","cold-regulated protein;(source:Araport11)"]
["AT5G20000","turquoise","AAA-type ATPase family protein;(source:Araport11)"]
["AT4G30600","turquoise","signal recognition particle receptor alpha subunit family protein;(source:Araport11)"]
["AT2G47970","turquoise","Nuclear pore localization protein NPL4;(source:Araport11)"]
["AT4G36600","turquoise","Late embryogenesis abundant (LEA) protein;(source:Araport11)"]
["AT3G07565","turquoise","histone H2A deubiquitinase (DUF3755);(source:Araport11)"]
["AT5G19030","turquoise","Cloroplast RRM-containing protein.RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT1G03350","turquoise","BSD domain-containing protein;(source:Araport11)"]
["AT3G47530","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G34450","turquoise","HMG-box (high mobility group) DNA-binding family protein;(source:Araport11)"]
["AT5G07380","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G69760","turquoise","suppressor SRP40-like protein;(source:Araport11)"]
["AT1G58235","turquoise","hypothetical protein;(source:Araport11)"]
["AT5G65910","turquoise","BSD domain-containing protein;(source:Araport11)"]
["AT2G35540","turquoise","DNAJ heat shock N-terminal domain-containing protein;(source:Araport11)"]
["AT1G27430","turquoise","GYF domain-containing protein;(source:Araport11)"]
["AT5G18950","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G47080","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G18130","turquoise","transmembrane protein;(source:Araport11)"]
["AT5G08500","turquoise","Transmembrane CLPTM1 family protein;(source:Araport11)"]
["AT1G08050","turquoise","Zinc finger (C3HC4-type RING finger) family protein;(source:Araport11)"]
["AT5G62910","turquoise","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G01170","turquoise","ozone-responsive stress-like protein (DUF1138);(source:Araport11)"]
["AT1G55630","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G61530","turquoise","small G protein family protein / RhoGAP family protein;(source:Araport11)"]
["AT3G21030","turquoise","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 1.4e-16 P-value blast match to gb|AAO73527.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family);(source:TAIR10)"]
["AT1G48840","turquoise","Plant protein of unknown function (DUF639);(source:TAIR10)"]
["AT4G17180","turquoise","O-Glycosyl hydrolases family 17 protein;(source:Araport11)"]
["AT1G17680","turquoise","tetratricopeptide repeat (TPR)-containing protein;(source:Araport11)"]
["AT5G23680","turquoise","Sterile alpha motif (SAM) domain-containing protein;(source:Araport11)"]
["AT5G05320","turquoise","FAD/NAD(P)-binding oxidoreductase family protein;(source:Araport11)"]
["AT4G27610","turquoise","intracellular protein transporter;(source:Araport11)"]
["AT1G12775","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G19895","turquoise","RING/U-box superfamily protein;(source:Araport11)"]
["AT2G19180","turquoise","hypothetical protein;(source:Araport11)"]
["AT4G29420","turquoise","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT4G22360","turquoise","SWIB complex BAF60b domain-containing protein;(source:Araport11)"]
["AT5G65570","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G24970","turquoise","Protein kinase superfamily protein;(source:Araport11)"]
["AT4G38980","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G49170","turquoise","hypothetical protein;(source:Araport11)"]
["AT4G24200","turquoise","Transcription elongation factor (TFIIS) family protein;(source:Araport11)"]
["AT1G06630","turquoise","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT5G48385","turquoise","FRIGIDA-like protein;(source:Araport11)"]
["AT5G54430","turquoise","Contains a universal stress protein domain. Protein is phosphorylated in response to Phytophthora infestans zoospores and xylanase."]
["AT1G01930","turquoise","zinc finger protein-like protein;(source:Araport11)"]
["AT1G07080","turquoise","Thioredoxin superfamily protein;(source:Araport11)"]
["AT3G05810","turquoise","IGR motif protein;(source:Araport11)"]
["AT1G78265","turquoise","Natural antisense transcript overlaps with AT1G78270;(source:Araport11)"]
["AT2G37320","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G16610","turquoise","pentatricopeptide (PPR) repeat-containing protein;(source:Araport11)"]
["AT5G04000","turquoise","hypothetical protein;(source:Araport11)"]
["AT3G11960","turquoise","Cleavage and polyadenylation specificity factor (CPSF) A subunit protein;(source:Araport11)"]
["AT3G51110","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT4G09840","turquoise","hypothetical protein;(source:Araport11)"]
["AT5G51280","turquoise","DEAD-box protein abstrakt;(source:Araport11)"]
["AT1G76070","turquoise","hypothetical protein;(source:Araport11)"]
["AT4G38380","turquoise","MATE efflux family protein;(source:Araport11)"]
["AT5G09880","turquoise","Splicing factor, CC1-like protein;(source:Araport11)"]
["AT5G08285","turquoise","Natural antisense transcript overlaps with AT5G55460;(source:Araport11)"]
["AT2G16595","turquoise","Translocon-associated protein (TRAP), alpha subunit;(source:Araport11)"]
["AT3G12350","turquoise","F-box family protein;(source:Araport11)"]
["AT1G24290","turquoise","AAA-type ATPase family protein;(source:Araport11)"]
["AT1G51200","turquoise","A20/AN1-like zinc finger family protein;(source:Araport11)"]
["AT4G28260","turquoise","acyl-UDP-N-acetylglucosamine O-acyltransferase;(source:Araport11)"]
["AT4G14145","turquoise","cytochrome C oxidase assembly protein;(source:Araport11)"]
["AT2G43720","turquoise","FAM136A-like protein (DUF842);(source:Araport11)"]
["AT1G02380","turquoise","transmembrane protein;(source:Araport11)"]
["AT1G74860","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G75400","turquoise","RING/U-box superfamily protein;(source:Araport11)"]
["AT2G36540","turquoise","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)"]
["AT3G15120","turquoise","Encodes BRP1, an ATPase domain-containing protein that interacts with BRAT1 to negatively regulate transcriptional silencing at methylated genomic regions."]
["AT3G07790","turquoise","DGCR14-like protein;(source:Araport11)"]
["AT3G04360","turquoise","Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11)"]
["AT1G11240","turquoise","ribosomal RNA-processing protein;(source:Araport11)"]
["AT5G40720","turquoise","C3H4 type zinc finger protein (DUF23);(source:Araport11)"]
["AT1G65030","turquoise","This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase"]
["AT1G18030","turquoise","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT3G49601","turquoise","pre-mRNA-splicing factor;(source:Araport11)"]
["AT1G31790","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G68190","turquoise","B-box zinc finger family protein;(source:Araport11)"]
["AT2G25740","turquoise","ATP-dependent protease La (LON) domain protein;(source:Araport11)"]
["AT1G68030","turquoise","RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11)"]
["AT2G37400","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G47330","turquoise","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT5G03180","turquoise","RING/U-box superfamily protein;(source:Araport11)"]
["AT5G02910","turquoise","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT3G15351","turquoise","P53/DNA damage-regulated protein;(source:Araport11)"]
["AT5G40570","turquoise","Surfeit locus protein 2 (SURF2);(source:Araport11)"]
["AT2G25355","turquoise","PNAS-3-like protein;(source:Araport11)"]
["AT2G25350","turquoise","Phox (PX) domain-containing protein;(source:Araport11)"]
["AT1G20070","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G15180","turquoise","MATE efflux family protein;(source:Araport11)"]
["AT5G23520","turquoise","smr (Small MutS Related) domain-containing protein;(source:Araport11)"]
["AT1G09290","turquoise","hypothetical protein;(source:Araport11)"]
["AT5G20380","turquoise","Encodes an inorganic phosphate transporter (PHT4;5)."]
["AT5G55896","turquoise","transposable_element_gene;(source:Araport11);non-LTR retrotransposon family (LINE), has a 1.7e-49 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus);(source:TAIR10)"]
["AT1G37150","turquoise","Although HCS2 is predicted to encode a biotin protein ligase / holocarboxylase synthetase (HCS), hcs2 mutants do not show a decrease in HCS activity. A dual-targeted HCS1 (At2g25710) might account for the HCS activity observed in multiple subcellular compartments in Arabidopsis."]
["AT4G32160","turquoise","Phox (PX) domain-containing protein;(source:Araport11)"]
["AT1G20890","turquoise","caveolin-1 protein;(source:Araport11)"]
["AT1G08210","turquoise","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT5G64680","turquoise","mediator-associated protein;(source:Araport11)"]
["AT3G02740","turquoise","Eukaryotic aspartyl protease family protein;(source:Araport11)"]
["AT1G04230","turquoise","rRNA-processing EFG1-like protein (DUF2361);(source:Araport11)"]
["AT4G03120","turquoise","C2H2 and C2HC zinc fingers superfamily protein;(source:Araport11)"]
["AT5G48970","turquoise","Encodes a mitochondrial thiamin diphosphate carrier."]
["AT5G52530","turquoise","dentin sialophosphoprotein-like protein;(source:Araport11)"]
["AT2G37110","turquoise","PLAC8 family protein;(source:Araport11)"]
["AT3G59430","turquoise","hypothetical protein;(source:Araport11)"]
["AT2G01400","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G34580","turquoise","Major facilitator superfamily protein;(source:Araport11)"]
["AT5G45300","turquoise","Encodes a beta-amylase-like protein present in the nucleus rather than targeted to the chloroplast. Contains BRASSINAZOLE RESISTANT1 (BZR1)-type DNA binding domains. Activates gene expression in protoplast transactivation assays."]
["AT4G01650","turquoise","Polyketide cyclase / dehydrase and lipid transport protein;(source:Araport11)"]
["AT3G14800","turquoise","transposable_element_gene;(source:Araport11);hAT-like transposase family (hobo/Ac/Tam3), has a 2.1e-83 P-value blast match to GB:CAA29005 ORFa of Maize Ac (hAT-element) (Zea mays);(source:TAIR10)"]
["AT5G13070","turquoise","MSF1-like family protein;(source:Araport11)"]
["AT5G23110","turquoise","Zinc finger, C3HC4 type (RING finger) family protein;(source:Araport11)"]
["AT2G27980","turquoise","Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein;(source:Araport11)"]
["AT5G38840","turquoise","SMAD/FHA domain-containing protein;(source:Araport11)"]
["AT5G67290","turquoise","FAD-dependent oxidoreductase family protein;(source:Araport11)"]
["AT4G25690","turquoise","stress response NST1-like protein;(source:Araport11)"]
["AT5G22320","turquoise","Leucine-rich repeat (LRR) family protein;(source:Araport11)"]
["AT5G03100","turquoise","F-box/RNI-like superfamily protein, expressed in the peroxisome."]
["AT5G43920","turquoise","transducin family protein / WD-40 repeat family protein;(source:Araport11)"]
["AT5G15680","turquoise","ARM repeat superfamily protein;(source:Araport11)"]
["AT5G11900","turquoise","Translation initiation factor SUI1 family protein;(source:Araport11)"]
["AT1G51370","turquoise","F-box/RNI-like/FBD-like domains-containing protein;(source:Araport11)"]
["AT2G21820","turquoise","seed maturation protein;(source:Araport11)"]
["AT3G53390","turquoise","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT5G08275","turquoise","Natural antisense transcript overlaps with AT5G55450;(source:Araport11)"]
["AT1G19480","turquoise","DNA glycosylase superfamily protein;(source:Araport11)"]
["AT1G04590","turquoise","PPR containing-like protein;(source:Araport11)"]
["AT1G53780","turquoise","26S proteasome regulatory complex ATPase;(source:Araport11)"]
["AT3G49490","turquoise","hypothetical protein;(source:Araport11)"]
["AT3G18310","turquoise","TATA box-binding protein associated factor RNA polymerase I subunit C;(source:Araport11)"]
["AT4G12240","turquoise","zinc finger (C2H2 type) family protein;(source:Araport11)"]
["AT5G65240","turquoise","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT3G01400","turquoise","ARM repeat superfamily protein;(source:Araport11)"]
["AT2G31600","turquoise","INO80 complex subunit D-like protein;(source:Araport11)"]
["AT2G29300","turquoise","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT2G37520","turquoise","Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein;(source:Araport11)"]
["AT4G22350","turquoise","Ubiquitin C-terminal hydrolases superfamily protein;(source:Araport11)"]
["AT2G43590","turquoise","PR-3 like gene that is induced by pathogen infection."]
["AT5G54170","turquoise","Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11)"]
["AT4G18920","turquoise","histone acetyltransferase (DUF1264);(source:Araport11)"]
["AT1G33420","turquoise","RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11)"]
["AT4G16100","turquoise","heat shock protein, putative (DUF789);(source:Araport11)"]
["AT2G20920","turquoise","chaperone (DUF3353);(source:Araport11)"]
["AT1G31485","turquoise","Natural antisense transcript overlaps with AT1G31490;(source:Araport11)"]
["AT4G39952","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G61900","turquoise","hypothetical protein;(source:Araport11)"]
["AT5G14105","turquoise","hypothetical protein;(source:Araport11)"]
["AT3G13990","turquoise","dentin sialophosphoprotein, putative (DUF1296);(source:Araport11)"]
["AT1G48310","turquoise","chromatin remodeling factor18;(source:Araport11)"]
["AT2G18760","turquoise","chromatin remodeling 8;(source:Araport11)"]
["AT1G35660","turquoise","erythroid differentiation factor-like protein;(source:Araport11)"]
["AT3G03776","turquoise","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT2G37310","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G14880","turquoise","transcription factor-like protein;(source:Araport11)"]
["AT2G27285","turquoise","nuclear speckle splicing regulatory-like protein (DUF2040);(source:Araport11)"]
["AT3G56250","turquoise","hypothetical protein;(source:Araport11)"]
["AT2G33760","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT4G10843","turquoise","hypothetical protein;(source:Araport11)"]
["AT3G20020","turquoise","Encodes a homolog of human protein arginine methyltransferases 6 that physically associates with nuclear factor Y to regulate photoperiodic flowering."]
["AT4G08580","turquoise","microfibrillar-associated protein-like protein;(source:Araport11)"]
["AT5G44080","turquoise","Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11)"]
["AT5G54300","turquoise","cotton fiber-like protein (DUF761);(source:Araport11)"]
["AT4G28020","turquoise","tRNA-thr(GGU) m(6)t(6)A37 methyltransferase;(source:Araport11)"]
["AT1G17990","turquoise","FMN-linked oxidoreductases superfamily protein;(source:Araport11)"]
["AT3G29310","turquoise","calmodulin-binding protein-like protein;(source:Araport11)"]
["AT3G66652","turquoise","fip1 motif-containing protein;(source:Araport11)"]
["AT3G21650","turquoise","Encodes protein phosphatase 2A (PP2A) B'zeta subunit. Targeted to mitochondria."]
["AT5G60610","turquoise","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT1G50020","turquoise","tubulin alpha-6 chain;(source:Araport11)"]
["AT2G02730","turquoise","GRIP/coiled-coil protein, putative (DUF1664);(source:Araport11)"]
["AT1G20300","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G13910","turquoise","hypothetical protein (DUF3511);(source:Araport11)"]
["AT3G17740","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G18750","turquoise","Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL65 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth."]
["AT5G17000","turquoise","Zinc-binding dehydrogenase family protein;(source:Araport11)"]
["AT3G14595","turquoise","Ribosomal protein L18ae family;(source:Araport11)"]
["AT4G33690","turquoise","G patch domain protein;(source:Araport11)"]
["AT1G02880","turquoise","Encodes a thiamine pyrophosphokinase capable of producing thiamine pyrophosphate from free thiamine."]
["AT5G35660","turquoise","Glycine-rich protein family;(source:Araport11)"]
["AT5G16610","turquoise","hypothetical protein;(source:Araport11)"]
["AT2G22070","turquoise","pentatricopeptide (PPR) repeat-containing protein;(source:Araport11)"]
["AT1G27750","turquoise","nucleic acid binding protein;(source:Araport11)"]
["AT2G22821","turquoise","Natural antisense transcript overlaps with AT2G22820. The RNA is cell-to-cell mobile."]
["AT3G63400","turquoise","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11)"]
["AT4G01020","turquoise","Similar to DRIF1."]
["AT3G57570","turquoise","ARM repeat superfamily protein;(source:Araport11)"]
["AT3G19520","turquoise","hypothetical protein (DUF626);(source:Araport11)"]
["AT5G44000","turquoise","Glutathione S-transferase family protein;(source:Araport11)"]
["AT1G12330","turquoise","cyclin-dependent kinase-like protein;(source:Araport11)"]
["AT1G02890","turquoise","AAA-type ATPase family protein;(source:Araport11)"]
["AT5G19150","turquoise","AT5G19150 is a dehydratase that converts (S)-NAD(P)HX to NAD(P)H."]
["AT2G21300","turquoise","ATP binding microtubule motor family protein;(source:Araport11)"]
["AT5G42570","turquoise","B-cell receptor-associated 31-like protein;(source:Araport11)"]
["AT2G45530","turquoise","RING/U-box superfamily protein;(source:Araport11)"]
["AT3G49142","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G50290","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G62422","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G29220","turquoise","transcriptional regulator family protein;(source:Araport11)"]
["AT5G19050","turquoise","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT4G13970","turquoise","zinc ion binding protein;(source:Araport11)"]
["AT5G27230","turquoise","Frigida-like protein;(source:Araport11)"]
["AT1G05670","turquoise","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)"]
["AT3G51530","turquoise","F-box/RNI-like/FBD-like domains-containing protein;(source:Araport11)"]
["AT3G02340","turquoise","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G62130","turquoise","AAA-type ATPase family protein;(source:Araport11)"]
["AT1G22830","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G12710","turquoise","This gene is predicted to encode a protein with a PP2 domain. This domain in present in lectins found in squash and cucumber, suggesting that this protein could potentially have carbohydrate binding capabilities."]
["AT2G15695","turquoise","peptide methionine sulfoxide reductase (Protein of unknown function DUF829, transmembrane 53);(source:Araport11)"]
["AT3G24927","turquoise","pseudogene of expressed protein;(source:Araport11)"]
["AT1G55152","turquoise","hypothetical protein;(source:Araport11)"]
["AT3G50690","turquoise","Leucine-rich repeat (LRR) family protein;(source:Araport11)"]
["AT1G69290","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G43245","turquoise","SET domain-containing protein;(source:Araport11)"]
["AT1G32630","turquoise","FAM50A-like protein;(source:Araport11)"]
["AT5G54000","turquoise","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT5G47090","turquoise","coiled-coil protein;(source:Araport11)"]
["AT3G04930","turquoise","DNA-binding storekeeper protein-related transcriptional regulator;(source:Araport11)"]
["AT2G34730","turquoise","myosin heavy chain-like protein;(source:Araport11)"]
["AT3G58270","turquoise","phospholipase-like protein (PEARLI 4) with TRAF-like domain protein;(source:Araport11)"]
["AT1G71840","turquoise","transducin family protein / WD-40 repeat family protein;(source:Araport11)"]
["AT3G57380","turquoise","Glycosyltransferase family 61 protein;(source:Araport11)"]
["AT5G56370","turquoise","F-box/RNI-like/FBD-like domains-containing protein;(source:Araport11)"]
["AT2G41505","turquoise","hypothetical protein;(source:Araport11)"]
["AT3G04050","turquoise","Pyruvate kinase family protein;(source:Araport11)"]
["AT1G71430","turquoise","hypothetical protein;(source:Araport11)"]
["AT3G02620","turquoise","&#916;9 Stearoyl-ACP Desaturase"]
["AT1G33415","turquoise","Natural antisense transcript overlaps with AT1G33420 and AT1G33430;(source:Araport11)"]
["AT5G01390","turquoise","DNAJ heat shock family protein;(source:Araport11)"]
["AT3G15780","turquoise","transmembrane protein;(source:Araport11)"]
["AT3G21600","turquoise","Senescence/dehydration-associated protein-like protein;(source:Araport11)"]
["AT5G15880","turquoise","golgin family A protein;(source:Araport11)"]
["AT2G32000","turquoise","DNA topoisomerase, type IA, core;(source:Araport11)"]
["AT4G03230","turquoise","G-type lectin S-receptor-like Serine/Threonine-kinase;(source:Araport11)"]
["AT5G38895","turquoise","RING/U-box superfamily protein;(source:Araport11)"]
["AT3G28670","turquoise","oxidoreductase, zinc-binding dehydrogenase family protein;(source:Araport11)"]
["AT1G05730","turquoise","FAM136A-like protein (DUF842);(source:Araport11)"]
["AT4G16580","turquoise","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT2G26470","turquoise","embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein;(source:Araport11)"]
["AT1G80150","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G54290","turquoise","hemerythrin HHE cation-binding domain protein;(source:Araport11)"]
["AT1G80570","turquoise","RNI-like superfamily protein;(source:Araport11)"]
["AT3G13350","turquoise","HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein;(source:Araport11)"]
["AT1G01355","turquoise","Putative endonuclease or glycosyl hydrolase;(source:Araport11)"]
["AT1G01350","turquoise","Zinc finger (CCCH-type/C3HC4-type RING finger) family protein;(source:Araport11)"]
["AT1G06370","turquoise","pseudogene of Alg9-like mannosyltransferase family;(source:Araport11)"]
["AT3G17710","turquoise","F-box and associated interaction domains-containing protein;(source:Araport11)"]
["AT2G23110","turquoise","Late embryogenesis abundant protein, group 6;(source:Araport11)"]
["AT2G16530","turquoise","Encodes polyprenol reductase involved in N-gylcosylation. Mutants are defective in pollen development. Knockouts are embryo lethal"]
["AT5G26600","turquoise","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11)"]
["AT3G13020","turquoise","hAT transposon superfamily protein;(source:Araport11)"]
["AT1G31430","turquoise","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)"]
["AT2G39795","turquoise","Mitochondrial glycoprotein family protein;(source:Araport11)"]
["AT2G38820","turquoise","DUF506 gene family member"]
["AT4G29400","turquoise","oxidoreductase/transition metal ion-binding protein (DUF3531);(source:Araport11)"]
["AT1G23780","turquoise","F-box family protein;(source:Araport11)"]
["AT1G50600","turquoise","Encodes a scarecrow-like protein (SCL5). Member of GRAS gene family."]
["AT1G21780","turquoise","BTB/POZ domain-containing protein. Contains similarity to gb:AJ000644 SPOP (speckle-type POZ protein) from Homo sapiens and contains a PF:00651 BTB/POZ domain. ESTs gb:T75841, gb:R89974, gb:R30221, gb:N96386, gb:T76457, gb:AI100013 and gb:T76456 come from this gene;supported by full-length. Interacts with CUL3A and CUL3B."]
["AT3G17030","turquoise","Nucleic acid-binding proteins superfamily;(source:Araport11)"]
["AT3G52660","turquoise","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT5G27750","turquoise","F-box/FBD-like domains containing protein;(source:Araport11)"]
["AT3G51580","turquoise","transmembrane protein;(source:Araport11)"]
["AT1G07310","turquoise","Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11)"]
["AT3G10250","turquoise","histidine-tRNA ligase;(source:Araport11)"]
["AT5G48990","turquoise","encodes an F-box protein that interacts with SKP1 and likely to be involved in ubiquitin-mediated protein degradation."]
["AT4G17010","turquoise","transcription factor IIIB;(source:Araport11)"]
["AT1G74750","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G66540","turquoise","U3 small nucleolar ribonucleoprotein;(source:Araport11)"]
["AT5G05710","turquoise","Pleckstrin homology (PH) domain superfamily protein;(source:Araport11)"]
["AT1G49650","turquoise","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT1G09680","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G51770","turquoise","Protein kinase superfamily protein;(source:Araport11)"]
["AT3G19900","turquoise","hypothetical protein;(source:Araport11)"]
["AT2G38420","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT4G35940","turquoise","hypothetical protein;(source:Araport11)"]
["AT2G45500","turquoise","AAA-type ATPase family protein;(source:Araport11)"]
["AT5G64430","turquoise","Octicosapeptide/Phox/Bem1p family protein;(source:Araport11)"]
["AT1G13195","turquoise","RING/U-box superfamily protein;(source:Araport11)"]
["AT3G62890","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G56030","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G65470","turquoise","O-fucosyltransferase family protein;(source:Araport11)"]
["AT3G06180","turquoise","Ribosomal protein L34e superfamily protein;(source:Araport11)"]
["AT1G05400","turquoise","hypothetical protein;(source:Araport11)"]
["AT3G05670","turquoise","RING/U-box protein;(source:Araport11)"]
["AT2G37035","turquoise","transmembrane protein;(source:Araport11)"]
["AT5G12320","turquoise","ankyrin repeat family protein;(source:Araport11)"]
["AT5G16660","turquoise","Low-density receptor-like protein;(source:Araport11)"]
["AT5G18540","turquoise","E3 ubiquitin-protein ligase;(source:Araport11)"]
["AT3G09890","turquoise","Ankyrin repeat family protein;(source:Araport11)"]
["AT1G17450","turquoise","B-block binding subunit of TFIIIC;(source:Araport11)"]
["AT5G04880","turquoise","pseudogene of ABC transporter family protein"]
["AT1G50910","turquoise","hypothetical protein;(source:Araport11)"]
["AT2G15270","turquoise","PRKR-interacting protein;(source:Araport11)"]
["AT2G39100","turquoise","RING/U-box superfamily protein;(source:Araport11)"]
["AT2G34355","turquoise","Major facilitator superfamily protein;(source:Araport11)"]
["AT3G43580","turquoise","Beta-galactosidase related protein;(source:Araport11)"]
["AT4G25580","turquoise","CAP160 protein;(source:Araport11)"]
["AT2G43770","turquoise","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT1G26660","turquoise","Prefoldin chaperone subunit family protein;(source:Araport11)"]
["AT2G24960","turquoise","Myb/SANT-like DNA-binding domain protein;(source:Araport11)"]
["AT5G13800","turquoise","Encodes a pheophytinase that is involved in chlorophyll breakdown. Its transcript levels increase during senescence and pph-1 mutants have a stay-green phenotype."]
["AT4G36790","turquoise","Major facilitator superfamily protein;(source:Araport11)"]
["AT1G07220","turquoise","O-glucosyltransferase rumi-like protein (DUF821);(source:Araport11)"]
["AT5G17910","turquoise","cardiomyopathy-associated protein;(source:Araport11)"]
["AT4G33170","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G08400","turquoise","RINT-1 / TIP-1 family;(source:Araport11)"]
["AT3G17460","turquoise","PHD finger family protein;(source:Araport11)"]
["AT1G33250","turquoise","beta-1,3-n-acetylglucosaminyltransferase radical fringe protein, putative (DUF604);(source:Araport11)"]
["AT2G13960","turquoise","Homeodomain-like superfamily protein;(source:Araport11)"]
["AT1G51645","turquoise","Natural antisense transcript overlaps with AT1G51640;(source:Araport11)"]
["AT2G29060","turquoise","GRAS family transcription factor;(source:Araport11)"]
["AT1G04945","turquoise","HIT-type Zinc finger family protein;(source:Araport11)"]
["AT2G44700","turquoise","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT3G60960","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G26990","turquoise","ENTH/VHS family protein;(source:Araport11)"]
["AT5G58210","turquoise","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT1G13090","turquoise","putative cytochrome P450"]
["AT4G26190","turquoise","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)"]
["AT1G05560","turquoise","A UDP-glucose transferase localized in the phragmoplast. It has been co-purified with the callose synthase complex and may transfer UDP-glucose from sucrose synthase to the callose synthase and thus help form a substrate channel for the synthesis of callose at the forming cell plate. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. UGT1 encodes a protein with glucosyltransferase activity with high sequence homology to UGT2 (AT1G05530). It belongs to an UGT subfamily that binds UDP-glucose but not UDP-glucuronate, UDP-galactose, or UDP-rhamnose as the glycosyl donor. UGT1 was shown to be able to use abscisic acid as glycosylation substrate in the presence of UDP-glucose."]
["AT5G66780","turquoise","late embryogenesis abundant protein;(source:Araport11)"]
["AT1G76460","turquoise","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT2G29210","turquoise","splicing factor PWI domain-containing protein;(source:Araport11)"]
["AT5G10370","turquoise","Identified in a screen for suppressors of FREE1, a plant specific ESCRT component. Binds to SNX1 and may be directly or indirectly involved in membrane protein homeostasis/transport."]
["AT3G26580","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G76700","turquoise","DNAJ heat shock N-terminal domain-containing protein;(source:Araport11)"]
["AT1G19540","turquoise","NmrA-like negative transcriptional regulator family protein;(source:Araport11)"]
["AT1G08060","turquoise","Encodes a transcriptional silencer that is required for proper expression of PRR/NLR immune receptor genes. The MOM1 complex facilitates the process of transgene silencing; influences DNA methylation and chromatin accessibility at some endogenous RdDM sites."]
["AT3G14160","turquoise","2-oxoglutarate-dependent dioxygenase family protein;(source:Araport11)"]
["AT5G62900","turquoise","PADRE protein down-regulated after infection by S. sclerotiorum."]
["AT3G03440","turquoise","ARM repeat superfamily protein;(source:Araport11)"]
["AT1G16210","turquoise","coiled-coil protein;(source:Araport11)"]
["AT1G09520","turquoise","hypothetical protein;(source:Araport11)"]
["AT5G41020","turquoise","myb family transcription factor;(source:Araport11)"]
["AT5G53500","turquoise","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT2G19350","turquoise","transmembrane protein (DUF872);(source:Araport11)"]
["AT4G19090","turquoise","transmembrane protein, putative (DUF594);(source:Araport11)"]
["AT1G17520","turquoise","Single Myb Histone (SMH) gene family member. Contains terminal acidic SANT domain."]
["AT5G60710","turquoise","Zinc finger (C3HC4-type RING finger) family protein;(source:Araport11)"]
["AT3G11890","turquoise","Sterile alpha motif (SAM) domain-containing protein;(source:Araport11)"]
["AT3G45620","turquoise","This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase"]
["AT1G53760","turquoise","K+-H+ exchange-like protein;(source:Araport11)"]
["AT5G56100","turquoise","glycine-rich protein / oleosin;(source:Araport11)"]
["AT1G13780","turquoise","F-box/RNI-like/FBD-like domains-containing protein;(source:Araport11)"]
["AT2G34740","turquoise","protein phosphatase 2C family protein;(source:Araport11)"]
["AT4G21660","turquoise","proline-rich spliceosome-associated (PSP) family protein;(source:Araport11)"]
["AT2G41550","turquoise","Rho termination factor;(source:Araport11)"]
["AT2G04690","turquoise","Pyridoxamine 5-phosphate oxidase family protein;(source:Araport11)"]
["AT1G31220","turquoise","N10-formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase that catalyzes the conversion of phosphoribosyl glycineamide to phosphoribosyl N-formylglycineamide"]
["AT1G19110","turquoise","inter-alpha-trypsin inhibitor heavy chain-like protein;(source:Araport11)"]
["AT1G73710","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G09910","turquoise","Rhamnogalacturonate lyase family protein;(source:Araport11)"]
["AT1G75230","turquoise","DNA glycosylase superfamily protein;(source:Araport11)"]
["AT5G13970","turquoise","midasin-like protein;(source:Araport11)"]
["AT3G28850","turquoise","Glutaredoxin family protein;(source:Araport11)"]
["AT5G11600","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G22200","turquoise","Endoplasmic reticulum vesicle transporter protein;(source:Araport11)"]
["AT5G39350","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G46554","turquoise","other_RNA;(source:Araport11)"]
["AT3G60150","turquoise","NADH dehydrogenase ubiquinone 1 alpha subcomplex assembly factor-like protein (DUF498/DUF598);(source:Araport11)"]
["AT1G71780","turquoise","WD repeat protein;(source:Araport11)"]
["AT2G43830","turquoise","pseudogene of Protein kinase superfamily protein;(source:Araport11)"]
["AT3G50370","turquoise","hypothetical protein;(source:Araport11)"]
["AT3G49320","turquoise","Metal-dependent protein hydrolase;(source:Araport11)"]
["AT1G75810","turquoise","transmembrane protein;(source:Araport11)"]
["AT5G20120","turquoise","testis- and ovary-specific PAZ domain protein;(source:Araport11)"]
["AT1G30070","turquoise","Possibly involved in response to heat stress since highly correlated based on differential expression with AT1G54050 (HSP17.4B), AT1G74310 (HSP101), AT2G20560 (DNAJ), AT3G12580 (HSP70-4), AT4G12400 (HOP3), AT5G25450."]
["AT1G24300","turquoise","GYF domain-containing protein;(source:Araport11)"]
["AT4G19010","turquoise","Encodes for a 4-coumarate-CoA ligase involved in the biosynthesis of the benzenoid ring of ubiquinone from phenylalanine."]
["AT4G19150","turquoise","Ankyrin repeat family protein;(source:Araport11)"]
["AT5G39785","turquoise","hypothetical protein (DUF1666);(source:Araport11)"]
["AT5G16340","turquoise","AMP-dependent synthetase and ligase family protein;(source:Araport11)"]
["AT5G18770","turquoise","F-box/FBD-like domains containing protein;(source:Araport11)"]
["AT4G31070","turquoise","PPR superfamily protein;(source:Araport11)"]
["AT2G34040","turquoise","Apoptosis inhibitory protein 5 (API5);(source:Araport11)"]
["AT2G45320","turquoise","polyphosphatidylinositol phosphatase;(source:Araport11)"]
["AT5G48680","turquoise","Sterile alpha motif (SAM) domain-containing protein;(source:Araport11)"]
["AT5G65850","turquoise","F-box and associated interaction domains-containing protein;(source:Araport11)"]
["AT5G61370","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G69950","turquoise","transposable_element_gene;(source:Araport11);hAT-like transposase family (hobo/Ac/Tam3), has a 1.0e-71 P-value blast match to GB:CAA29005 ORFa of Maize Ac (hAT-element) (Zea mays);(source:TAIR10)"]
["AT2G03690","turquoise","Ubiquinone biosynthesis protein COQ4 homolog."]
["AT4G19220","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G50380","turquoise","vacuolar protein sorting-associated protein, putative (DUF1162);(source:Araport11)"]
["AT2G23040","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G02370","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G25070","turquoise","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT2G26790","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT4G03440","turquoise","Ankyrin repeat family protein;(source:Araport11)"]
["AT5G45720","turquoise","AAA-type ATPase family protein;(source:Araport11)"]
["AT3G63220","turquoise","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT4G19400","turquoise","Profilin family protein;(source:Araport11)"]
["AT5G40280","turquoise","Encodes a beta subunit of farnesyl-trans-transferase, which is involved in meristem organization and ABA-mediated signal transduction pathway. Mutant phenotypes have been observed in meristem organization, and response to abscisic acid and drought.The mRNA is cell-to-cell mobile. Required for cuticle formation and negatively regulates Botrytis immunity."]
["AT5G65100","turquoise","Ethylene insensitive 3 family protein;(source:Araport11)"]
["AT2G03530","turquoise","Mediate high-affinity uracil and 5-FU (a toxic uracil analogue) transport when expressed in yeast and Xenopus oocytes.Involved in allantoin transport."]
["AT5G08320","turquoise","E2F-associated phosphoprotein;(source:Araport11)"]
["AT4G15390","turquoise","HXXXD-type acyl-transferase family protein;(source:Araport11)"]
["AT1G34200","turquoise","Glyceraldehyde-3-phosphate dehydrogenase-like family protein;(source:Araport11)"]
["AT2G39580","turquoise","zinc finger C3H1 domain protein;(source:Araport11)"]
["AT2G38450","turquoise","Sel1 repeat protein;(source:Araport11)"]
["AT4G31410","turquoise","E3 ubiquitin-protein ligase, putative (DUF1644);(source:Araport11)"]
["AT3G04640","turquoise","glycine-rich protein;(source:Araport11)"]
["AT5G13310","turquoise","hypothetical protein;(source:Araport11)"]
["AT4G10080","turquoise","transmembrane protein;(source:Araport11)"]
["AT3G17450","turquoise","hAT dimerization domain-containing protein;(source:Araport11)"]
["AT4G19610","turquoise","nucleotide/nucleic acid binding protein;(source:Araport11)"]
["AT5G46920","turquoise","Intron maturase, type II family protein;(source:Araport11)"]
["AT4G26060","turquoise","Ribosomal protein L18ae family;(source:Araport11)"]
["AT1G07990","turquoise","SIT4 phosphatase-associated family protein;(source:Araport11)"]
["AT1G52650","turquoise","F-box/RNI superfamily protein;(source:Araport11)"]
["AT3G49400","turquoise","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT5G17270","turquoise","Protein prenylyltransferase superfamily protein;(source:Araport11)"]
["AT1G71350","turquoise","eukaryotic translation initiation factor SUI1 family protein;(source:Araport11)"]
["AT3G24740","turquoise","cellulose synthase, putative (DUF1644);(source:Araport11)"]
["AT2G45315","turquoise","Natural antisense transcript overlaps with AT2G45310;(source:Araport11)"]
["AT2G44730","turquoise","Alcohol dehydrogenase transcription factor Myb/SANT-like family protein;(source:Araport11)"]
["AT5G19920","turquoise","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT3G12400","turquoise","Mutants of this gene were initially identified because of the trichome morphogenesis phenotype. Those trichomes have multiple nuclei, a defect that turns out not to be restricted to the trichomes but also in all endoreduplicating cell types. This gene encodes a ubiquitin-binding protein with sequence similarities with yeast proteins that are components of the ESCRTI-III complexes. The Arabidopsis protein is found associated with the endosome."]
["AT3G50420","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G18633","turquoise","transposable_element_gene;(source:Araport11);non-LTR retrotransposon family (LINE), has a 1.8e-39 P-value blast match to GB:NP_038602 L1 repeat, Tf subfamily, member 18 (LINE-element) (Mus musculus);(source:TAIR10)"]
["AT1G36990","turquoise","C-jun-amino-terminal kinase-interacting protein;(source:Araport11)"]
["AT5G38780","turquoise","SABATH methyltransferase."]
["AT3G14830","turquoise","epstein-barr nuclear antigen;(source:Araport11)"]
["AT3G03880","turquoise","sterol O-acyltransferase, putative (DUF1639);(source:Araport11)"]
["AT1G03106","turquoise","hypothetical protein;(source:Araport11)"]
["AT5G61490","turquoise","transmembrane protein;(source:Araport11)"]
["AT3G17712","turquoise","hypothetical protein;(source:Araport11)"]
["AT3G42850","turquoise","Mevalonate/galactokinase family protein;(source:Araport11)"]
["AT4G08510","turquoise","mediator of RNA polymerase II transcription subunit-like protein;(source:Araport11)"]
["AT1G55675","turquoise","transmembrane protein;(source:Araport11)"]
["AT3G21070","turquoise","Encodes a protein with NAD(H) kinase activity."]
["AT1G48560","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G67920","turquoise","hypothetical protein;(source:Araport11)"]
["AT2G44020","turquoise","Mitochondrial transcription termination factor family protein;(source:Araport11)"]
["AT4G17140","turquoise","pleckstrin homology (PH) domain-containing protein;(source:Araport11)"]
["AT5G08240","turquoise","transmembrane protein;(source:Araport11)"]
["AT1G17010","turquoise","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT5G24320","turquoise","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT3G46930","turquoise","Encodes a Raf-Like Mitogen-Activated Protein Kinase Kinase Kinase Raf43. Required for tolerance to multiple abiotic stresses."]
["AT3G26910","turquoise","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT1G73970","turquoise","obscurin-like protein;(source:Araport11)"]
["AT3G03620","turquoise","MATE efflux family protein;(source:Araport11)"]
["AT4G02480","turquoise","AAA-type ATPase family protein;(source:Araport11)"]
["AT5G03700","turquoise","D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein;(source:Araport11)"]
["AT1G10095","turquoise","Protein prenylyltransferase superfamily protein;(source:Araport11)"]
["AT3G26115","turquoise","Pyridoxal-5-phosphate-dependent enzyme family protein;(source:Araport11)"]
["AT4G26140","turquoise","putative beta-galactosidase"]
["AT5G50860","turquoise","Protein kinase superfamily protein;(source:Araport11)"]
["AT5G27730","turquoise","heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624);(source:Araport11)"]
["AT1G17090","turquoise","transmembrane protein;(source:Araport11)"]
["AT5G17570","turquoise","TatD related DNase;(source:Araport11)"]
["AT1G60750","turquoise","NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11)"]
["AT5G58720","turquoise","smr (Small MutS Related) domain-containing protein;(source:Araport11)"]
["AT4G09150","turquoise","T-complex protein 11;(source:Araport11)"]
["AT5G07890","turquoise","myosin heavy chain-like protein;(source:Araport11)"]
["AT3G15358","turquoise","transmembrane protein;(source:Araport11)"]
["AT5G62950","turquoise","RNA polymerase II, Rpb4, core protein;(source:Araport11)"]
["AT3G44690","turquoise","hypothetical protein;(source:Araport11)"]
["AT2G32910","turquoise","DCD (Development and Cell Death) domain protein;(source:Araport11)"]
["AT2G40770","turquoise","RING-finger, DEAD-like helicase, PHD and SNF2 domain-containing protein;(source:Araport11)"]
["AT5G35375","turquoise","transmembrane protein;(source:Araport11)"]
["AT4G02760","turquoise","RNI-like superfamily protein;(source:Araport11)"]
["AT5G44090","turquoise","Calcium-binding EF-hand family protein;(source:Araport11)"]
["AT4G30150","turquoise","Urb2/Npa2 family protein;(source:Araport11)"]
["AT5G19490","turquoise","Histone superfamily protein;(source:Araport11)"]
["AT3G47850","turquoise","tRNA (Ile)-lysidine synthase;(source:Araport11)"]
["AT1G01810","turquoise","hypothetical protein;(source:Araport11)"]
["AT5G52190","turquoise","Sugar isomerase (SIS) family protein;(source:Araport11)"]
["AT4G23540","turquoise","ARM repeat superfamily protein;(source:Araport11)"]
["AT3G09310","turquoise","membrane protein insertion efficiency factor;(source:Araport11)"]
["AT5G10710","turquoise","centromere protein O;(source:Araport11)"]
["AT3G04560","turquoise","nucleolar/coiled-body phosphoprotein;(source:Araport11)"]
["AT2G38800","turquoise","Plant calmodulin-binding protein-like protein;(source:Araport11)"]
["AT1G71490","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G30470","turquoise","SIT4 phosphatase-associated family protein;(source:Araport11)"]
["AT3G22530","turquoise","heat shock protein;(source:Araport11)"]
["AT5G05800","turquoise","Myb/SANT-like DNA-binding domain protein;(source:Araport11)"]
["AT3G05140","turquoise","ROP binding protein kinases 2;(source:Araport11)"]
["AT3G56770","turquoise","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)"]
["AT5G60250","turquoise","zinc finger (C3HC4-type RING finger) family protein;(source:Araport11)"]
["AT1G55680","turquoise","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT1G01990","turquoise","hypothetical protein;(source:Araport11)"]
["AT5G15820","turquoise","RING/U-box superfamily protein;(source:Araport11)"]
["AT5G66010","turquoise","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT1G11710","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT4G38710","turquoise","glycine-rich protein;(source:Araport11)"]
["AT1G13360","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G18020","turquoise","FMN-linked oxidoreductases superfamily protein;(source:Araport11)"]
["AT1G01715","turquoise","hypothetical protein;(source:Araport11)"]
["AT3G04130","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT4G30730","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G28715","turquoise","hypothetical protein;(source:Araport11)"]
["AT5G07670","turquoise","RNI-like superfamily protein;(source:Araport11)"]
["AT1G66660","turquoise","Protein with RING/U-box and TRAF-like domain;(source:Araport11)"]
["AT3G18230","turquoise","Octicosapeptide/Phox/Bem1p family protein;(source:Araport11)"]
["AT5G65490","turquoise","suppressor-like protein;(source:Araport11)"]
["AT4G11911","turquoise","STAY-GREEN-like protein;(source:Araport11)"]
["AT5G15330","turquoise","Encodes a protein with a single SYG1/Pho81/XPR1 (SPX) domain that localizes to both the cytosol and nucleus, acting as a dose-dependent modulator of PHR1-dependent and PHR1-independent phosphate-starvation responses in shoots. SPX4 prevents translocation of PHR1 (AT4G28610) to the nucleus in a dose- and Pi-dependent manner. In contrast to SPX1, SPX4 modulates rather than suppresses phosphate-starvation response (PSR) gene expression."]
["AT2G47410","turquoise","WD40 domain-containing protein;(source:Araport11)"]
["AT1G28690","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT1G16830","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G49940","turquoise","hypothetical protein;(source:Araport11)"]
["AT2G21080","turquoise","Ras guanine nucleotide exchange factor K;(source:Araport11)"]
["AT1G76170","turquoise","2-thiocytidine tRNA biosynthesis protein, TtcA;(source:Araport11)"]
["AT2G12190","turquoise","Cytochrome P450 superfamily protein;(source:Araport11)"]
["AT1G14300","turquoise","ARM repeat superfamily protein;(source:Araport11)"]
["AT3G48120","turquoise","serine/arginine-rich splicing factor;(source:Araport11)"]
["AT1G08165","turquoise","hypothetical protein;(source:Araport11)"]
["AT5G59140","turquoise","BTB/POZ domain-containing protein;(source:Araport11)"]
["AT3G53960","turquoise","Major facilitator superfamily protein;(source:Araport11)"]
["AT3G14710","turquoise","RNI-like superfamily protein;(source:Araport11)"]
["AT2G04740","turquoise","ankyrin repeat family protein;(source:Araport11)"]
["AT2G48160","turquoise","HUA and HUA-LIKE (HULK) genes act redundantly to regulate a subset of essential genes, with some (or all) family members also having specific functions."]
["AT3G01920","turquoise","DHBP synthase RibB-like alpha/beta domain-containing protein;(source:Araport11)"]
["AT4G40050","turquoise","signal transducer, putative (DUF3550/UPF0682);(source:Araport11)"]
["AT1G24190","turquoise","Enhances AtERF7-mediated transcriptional repression. RNAi lines show ABA hypersensitivity. Interacts with ERF7 and HDA19."]
["AT1G27150","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G03540","turquoise","transposable_element_gene;(source:Araport11);similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G11710.1);(source:TAIR10)"]
["AT2G43180","turquoise","Phosphoenolpyruvate carboxylase family protein;(source:Araport11)"]
["AT5G17540","turquoise","HXXXD-type acyl-transferase family protein;(source:Araport11)"]
["AT3G49640","turquoise","Aldolase-type TIM barrel family protein;(source:Araport11)"]
["AT3G53360","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G05510","turquoise","Phospholipid/glycerol acyltransferase family protein;(source:Araport11)"]
["AT3G02370","turquoise","tRNA-splicing endonuclease subunit;(source:Araport11)"]
["AT5G63300","turquoise","Ribosomal protein S21 family protein;(source:Araport11)"]
["AT3G25870","turquoise","hypothetical protein;(source:Araport11)"]
["AT3G26750","turquoise","HECT-like ubiquitin-conjugating enzyme (E2)-binding protein;(source:Araport11)"]
["AT1G26160","turquoise","Metal-dependent phosphohydrolase;(source:Araport11)"]
["AT4G07408","turquoise","This gene encodes a small protein and has either evidence of transcription or purifying selection."]
["AT1G23070","turquoise","organic solute transporter ostalpha protein (DUF300);(source:Araport11)"]
["AT1G50570","turquoise","Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11)"]
["AT4G25710","turquoise","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT3G12640","turquoise","RNA binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT4G27020","turquoise","inositol-1,4,5-trisphosphate 5-phosphatase;(source:Araport11)"]
["AT2G26355","turquoise","Natural antisense transcript overlaps with AT2G26360. The RNA is cell-to-cell mobile."]
["AT5G64150","turquoise","RNA methyltransferase family protein;(source:Araport11)"]
["AT1G70180","turquoise","Sterile alpha motif (SAM) domain-containing protein;(source:Araport11)"]
["AT4G11860","turquoise","FAM63A-like protein (DUF544);(source:Araport11)"]
["AT1G16650","turquoise","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT5G04860","turquoise","splicing factor 3A subunit;(source:Araport11)"]
["AT1G60560","turquoise","SWIM zinc finger family protein;(source:Araport11)"]
["AT4G10925","turquoise","Nuclear transport factor 2 (NTF2) family protein;(source:Araport11)"]
["AT2G05230","turquoise","DNAJ heat shock N-terminal domain-containing protein;(source:Araport11)"]
["AT1G76720","turquoise","eukaryotic translation initiation factor 2 (eIF-2) family protein;(source:Araport11)"]
["AT3G12210","turquoise","DNA binding protein;(source:Araport11)"]
["AT5G36250","turquoise","Encodes a myristoylated 2C-type protein phosphatase that interacts with the catalytic subunit of SnRK1.The mRNA is cell-to-cell mobile."]
["AT1G18610","turquoise","Galactose oxidase/kelch repeat superfamily protein, induced by calcium."]
["AT5G23155","turquoise","None;(source:Araport11)"]
["AT4G24160","turquoise","Encodes a soluble lysophosphatidic acid acyltransferase with additional triacylglycerol lipase and phosphatidylcholine hydrolyzing enzymatic activities. Plays a pivotal role in maintaining the lipid homeostasis by regulating both phospholipid and neutral lipid levels."]
["AT2G41835","turquoise","zinc finger (C2H2 type, AN1-like) family protein;(source:Araport11)"]
["AT5G35320","turquoise","DBH-like monooxygenase;(source:Araport11)"]
["AT3G49725","turquoise","GTP-binding protein, HflX;(source:Araport11)"]
["AT2G45460","turquoise","SMAD/FHA domain-containing protein;(source:Araport11)"]
["AT5G64730","turquoise","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT1G24265","turquoise","bZIP transcription factor, putative (DUF1664);(source:Araport11)"]
["AT5G66250","turquoise","kinectin-like protein;(source:Araport11)"]
["AT3G57890","turquoise","Tubulin binding cofactor C domain-containing protein;(source:Araport11)"]
["AT5G60590","turquoise","DHBP synthase RibB-like alpha/beta domain-containing protein;(source:Araport11)"]
["AT5G08780","turquoise","winged-helix DNA-binding transcription factor family protein;(source:Araport11)"]
["AT4G23040","turquoise","Ubiquitin-like superfamily protein;(source:Araport11)"]
["AT1G16040","turquoise","phosphatidylinositol-glycan biosynthesis class F-like protein;(source:Araport11)"]
["AT5G50350","turquoise","hypothetical protein;(source:Araport11)"]
["AT5G14140","turquoise","nucleic acid binding / zinc ion binding protein;(source:Araport11)"]
["AT1G36050","turquoise","Endoplasmic reticulum vesicle transporter protein;(source:Araport11)"]
["AT4G23493","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G33660","turquoise","Pseudogene of AT1G33660; peroxidase family protein"]
["AT1G67365","turquoise","Natural antisense transcript overlaps with AT1G67370;(source:Araport11)"]
["AT4G14500","turquoise","Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11)"]
["AT1G27300","turquoise","transmembrane protein;(source:Araport11)"]
["AT4G19950","turquoise","polyadenylate-binding protein 1-B-binding protein;(source:Araport11)"]
["AT4G39270","turquoise","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT1G67820","turquoise","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT3G62900","turquoise","CW-type Zinc Finger;(source:Araport11)"]
["AT1G50400","turquoise","Eukaryotic porin family protein;(source:Araport11)"]
["AT3G52240","turquoise","transcriptional regulator ATRX;(source:Araport11)"]
["AT1G07119","turquoise","Natural antisense transcript overlaps with AT1G07120;(source:Araport11)"]
["AT4G04180","turquoise","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT2G38430","turquoise","hypothetical protein;(source:Araport11)"]
["AT4G20920","turquoise","double-stranded RNA-binding domain (DsRBD)-containing protein;(source:Araport11)"]
["AT2G01510","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT2G43930","turquoise","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G80810","turquoise","One of 5 PO76/PDS5 cohesion cofactor orthologs of Arabidopsis."]
["AT5G23610","turquoise","DYAD protein;(source:Araport11)"]
["AT3G15200","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G63090","turquoise","Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11)"]
["AT3G57810","turquoise","Cysteine proteinases superfamily protein;(source:Araport11)"]
["AT1G78890","turquoise","hypothetical protein;(source:Araport11)"]
["AT2G36370","turquoise","ubiquitin-protein ligase;(source:Araport11)"]
["AT1G55090","turquoise","carbon-nitrogen hydrolase family protein;(source:Araport11)"]
["AT2G37020","turquoise","Translin family protein;(source:Araport11)"]
["AT3G57030","turquoise","Calcium-dependent phosphotriesterase superfamily protein;(source:Araport11)"]
["AT5G51130","turquoise","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT3G28720","turquoise","transmembrane protein;(source:Araport11)"]
["AT5G16650","turquoise","Chaperone DnaJ-domain superfamily protein;(source:Araport11)"]
["AT5G08139","turquoise","RING/U-box superfamily protein;(source:Araport11)"]
["AT4G31351","turquoise","This gene encodes a small protein and has either evidence of transcription or purifying selection."]
["AT1G16840","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G23710","turquoise","hypothetical protein (DUF1645);(source:Araport11)"]
["AT3G17626","turquoise","structural constituent of ribosome;(source:Araport11)"]
["AT3G22220","turquoise","hAT transposon superfamily;(source:Araport11)"]
["AT3G56720","turquoise","pre-mRNA-splicing factor;(source:Araport11)"]
["AT3G24070","turquoise","Zinc knuckle (CCHC-type) family protein;(source:Araport11)"]
["AT3G07780","turquoise","Encodes a nuclear PHD finger protein that is functionally redundant with OBE2 and plays an important role in the maintenance and/or establishment of the root and shoot apical meristems.The mRNA is cell-to-cell mobile."]
["AT1G61460","turquoise","G-type lectin S-receptor-like Serine/Threonine-kinase;(source:Araport11)"]
["AT5G03990","turquoise","FK506-binding-like protein;(source:Araport11)"]
["AT3G25970","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT4G37250","turquoise","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT3G05905","turquoise","Natural antisense transcript overlaps with AT3G05900;(source:Araport11)"]
["AT2G30680","turquoise","callose synthase-like protein;(source:Araport11)"]
["AT2G39300","turquoise","CAP-gly domain linker;(source:Araport11)"]
["AT4G09080","turquoise","Component of the translocon outer membrane (TOC) complex. Forms the outer envelope translocation channel (beta-barrel). Plays a role in preprotein conductance. Imported into chloroplast. Knockout mutants have abnormal etioplasts."]
["AT2G19080","turquoise","metaxin-like protein;(source:Araport11)"]
["AT5G17900","turquoise","microfibrillar-associated protein-like protein;(source:Araport11)"]
["AT5G53800","turquoise","nucleic acid-binding protein;(source:Araport11)"]
["AT5G47830","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G60670","turquoise","hypothetical protein (DUF3755);(source:Araport11)"]
["AT5G63830","turquoise","HIT-type Zinc finger family protein;(source:Araport11)"]
["AT3G51940","turquoise","oxidoreductase/transition metal ion-binding protein;(source:Araport11)"]
["AT2G13970","turquoise","transposable_element_gene;(source:Araport11);Mutator-like transposase family, has a 4.1e-39 P-value blast match to GB:AAA21566 mudrA of transposon=MuDR (MuDr-element) (Zea mays);(source:TAIR10)"]
["AT1G50380","turquoise","Prolyl oligopeptidase family protein;(source:Araport11)"]
["AT3G04350","turquoise","vacuolar sorting-associated protein (DUF946);(source:Araport11)"]
["AT1G43860","turquoise","sequence-specific DNA binding transcription factor;(source:Araport11)"]
["AT5G01940","turquoise","eukaryotic translation initiation factor 2B family protein / eIF-2B family protein;(source:Araport11)"]
["AT5G67350","turquoise","hypothetical protein;(source:Araport11)"]
["AT5G03450","turquoise","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT5G42470","turquoise","BRCA1-A complex subunit BRE-like protein;(source:Araport11)"]
["AT5G23710","turquoise","DNA binding / DNA-directed RNA polymerase;(source:Araport11)"]
["AT4G00755","turquoise","F-box family protein;(source:Araport11)"]
["AT1G50840","turquoise","DNA Polymerase gamma2. Dual targeting to mitochondria and plastids due to alternative translation initiation."]
["AT5G07360","turquoise","Amidase family protein;(source:Araport11)"]
["AT3G43510","turquoise","transposable_element_gene;(source:Araport11);copia-like retrotransposon family, has a 2.3e-11 P-value blast match to GB:BAA11674 ORF(AA 1-1338) (Ty1_Copia-element) (Nicotiana tabacum);(source:TAIR10)"]
["AT3G19080","turquoise","SWIB complex BAF60b domain-containing protein;(source:Araport11)"]
["AT5G51380","turquoise","RNI-like superfamily protein;(source:Araport11)"]
["AT5G52890","turquoise","AT hook motif-containing protein;(source:Araport11)"]
["AT3G20250","turquoise","Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3 Prime UTR of target mRNA transcripts. APUM5 is involved in susceptibility to CMV and is not required for bacterial or fungal pathogen resistance although its expression is induced upon bacterial and fungal infection. It is involved in the osmotic, salt, and drought stress responses."]
["AT1G04790","turquoise","RING/U-box superfamily protein;(source:Araport11)"]
["AT1G19396","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G19394","turquoise","hypothetical protein;(source:Araport11)"]
["AT3G22492","turquoise","pseudogene of prefoldin-related KE2 family protein"]
["AT1G52320","turquoise","kinesin-like protein;(source:Araport11)"]
["AT1G14650","turquoise","SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein;(source:Araport11)"]
["AT1G73380","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G06270","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT2G04940","turquoise","scramblase-like protein;(source:Araport11)"]
["AT5G42290","turquoise","transcription activator-like protein;(source:Araport11)"]
["AT1G17510","turquoise","hypothetical protein;(source:Araport11)"]
["AT1G60080","turquoise","3-5-exoribonuclease family protein;(source:Araport11)"]
["AT5G19430","turquoise","Encodes a C3HC4-type RING finger E3 ubiquitin ligase of the RING/U-box superfamily whose expression is responsive to both phosphate (Pi) and phosphite (Phi) in both roots and shoots."]
["AT5G24340","turquoise","3-5 exonuclease domain-containing protein;(source:Araport11)"]
["AT1G34300","turquoise","lectin protein kinase family protein;(source:Araport11)"]
["AT1G76820","turquoise","eukaryotic translation initiation factor 2 (eIF-2) family protein;(source:Araport11)"]
["AT5G13230","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT5G48610","turquoise","myb-like protein X;(source:Araport11)"]
["AT4G26120","turquoise","Ankyrin repeat family protein / BTB/POZ domain-containing protein;(source:Araport11)"]
["AT4G38150","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G28622","turquoise","transposable_element_gene;(source:Araport11);non-LTR retrotransposon family (LINE), has a 1.1e-21 P-value blast match to GB:NP_038602 L1 repeat, Tf subfamily, member 18 (LINE-element) (Mus musculus);(source:TAIR10)"]
["AT3G61180","turquoise","RING/U-box superfamily protein;(source:Araport11)"]
["AT2G14825","turquoise","histone deacetylase-like protein;(source:Araport11)"]
["AT5G38565","turquoise","F-box/FBD-like domains containing protein;(source:Araport11)"]
["AT1G05860","turquoise","INO80 complex subunit D-like protein;(source:Araport11)"]
["AT2G33980","turquoise","nudix hydrolase homolog 22;(source:Araport11)"]
["AT1G76980","turquoise","patatin-like phospholipase domain protein;(source:Araport11)"]
["AT1G16680","turquoise","Chaperone DnaJ-domain superfamily protein;(source:Araport11)"]
["AT2G37890","turquoise","Mitochondrial substrate carrier family protein;(source:Araport11)"]
["AT5G49410","turquoise","thiamine-phosphate synthase;(source:Araport11)"]
["AT3G60850","turquoise","hypothetical protein;(source:Araport11)"]
["AT3G04750","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)"]
["AT3G09100","turquoise","mRNA capping enzyme family protein;(source:Araport11)"]
["AT1G01730","turquoise","hypothetical protein;(source:Araport11)"]
["AT5G15700","turquoise","Nucleus encoded plastid RNA polymerase. Localized in mitochondria and chloroplast."]
["AT1G10170","turquoise","Encodes AtNFXL1, a homologue of the putative human transcription repressor NF-X1. Functions as a negative regulator of the trichothecene phytotoxin-induced defense response."]
["AT5G37750","turquoise","Chaperone DnaJ-domain superfamily protein;(source:Araport11)"]
["AT4G18690","turquoise","delay of germination protein;(source:Araport11)"]
["AT3G26340","turquoise","N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein;(source:Araport11)"]
["AT1G32760","turquoise","Glutaredoxin family protein;(source:Araport11)"]
["AT1G51720","turquoise","Amino acid dehydrogenase family protein;(source:Araport11)"]
["AT3G61370","turquoise","pre-mRNA-splicing factor CWC22-like protein (DUF3245);(source:Araport11)"]
["AT3G19190","turquoise","Encodes autophagy-related 2 (ATG2).The mRNA is cell-to-cell mobile. Autophagy controls guard cell ROS homeostasis by eliminating oxidized peroxisomes, thereby allowing stomatal opening."]
["AT3G48060","turquoise","BAH and TFIIS domain-containing protein;(source:Araport11)"]
["AT1G32810","turquoise","RING/FYVE/PHD zinc finger superfamily protein;(source:Araport11)"]
["AT5G50170","turquoise","C2 calcium/lipid-binding and GRAM domain containing protein;(source:Araport11)"]
["AT2G07808","turquoise","Pseudogene of ATMG01330"]
["AT1G11175","turquoise","other_RNA;(source:Araport11)"]
["AT4G15730","turquoise","CW-type Zinc Finger;(source:Araport11)"]
["AT1G03200","turquoise","hypothetical protein;(source:Araport11)"]
["AT5G25070","turquoise","neurofilament light protein;(source:Araport11)"]
["AT3G57340","turquoise","DnaJ heat shock amino-terminal domain protein (DUF1977);(source:Araport11)"]
["AT1G78070","turquoise","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)"]
["AT3G53040","turquoise","late embryogenesis abundant protein, putative / LEA protein;(source:Araport11)"]
["AT1G55590","turquoise","RNI-like superfamily protein;(source:Araport11)"]
["AT1G51350","turquoise","ARM repeat superfamily protein;(source:Araport11)"]
["AT4G11160","turquoise","Translation initiation factor 2, small GTP-binding protein;(source:Araport11)"]
["AT5G01350","turquoise","UvrABC system C protein;(source:Araport11)"]
["AT4G14190","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT5G56380","turquoise","F-box/RNI-like/FBD-like domains-containing protein;(source:Araport11)"]
["AT3G52740","turquoise","Plant specific protein.BIC1 and BIC2 inhibit cryptochrome function by blocking blue light-dependent cryptochrome dimerization.Light activated transcription of BICs is mediated by cryptochromes.","BLUE-LIGHT INHIBITOR OF CRYPTOCHROMES 1 (BIC1)"]
["AT3G13225","turquoise","WW domain-containing protein;(source:Araport11)","FORMIN BINDING PROTEIN 4 (FNBP4)"]
["AT5G02630","turquoise","Lung seven transmembrane receptor family protein;(source:Araport11)","(7TM3)","(7TM3);CANDIDATE G-PROTEIN COUPLED RECEPTOR 6 (CAND6)"]
["AT1G66510","turquoise","Homolog of a U5 snRNP assembly factor in yeast and humans; acts in splicing and promotes miRNA biogenesis. Interacts with the microprocessor component hyponastic leaves 1 (HYL1) in the cytoplasm, nucleus, and dicing bodies.","(AAR2)","(AAR2)"]
["AT3G61600","turquoise","POZ/BTB containing-protein AtPOB1. Involvement in protein ubiquitylation is predicted based on physical interaction with CULLIN 3 proteins. The mRNA is cell-to-cell mobile.","POZ/BTB CONTAININ G-PROTEIN 1 (POB1)","(AHT1);LIGHT-RESPONSE BTB 2 (LRB2);POZ/BTB CONTAININ G-PROTEIN 1 (POB1);POZ/BTB CONTAININ G-PROTEIN 1 (ATPOB1)"]
["AT3G07030","turquoise","Together with other ALBA proteins phase separates into stress granules and processing bodies under heat stress and directly binds to and recruits mRNAs to protect from degradation. Confers thermotolerance through stabilizing HSF messenger RNAs in cytoplasmic granules.","(ALBA6)","(ALBA6)"]
["AT5G59950","turquoise","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)","(ALY1)","(ALY1)"]
["AT5G02530","turquoise","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)","(ALY2)","(ALY2)"]
["AT4G32660","turquoise","Encodes protein kinase AME3.","(AME3)","(AME3)"]
["AT5G56180","turquoise","encodes a protein whose sequence is similar to actin-related proteins (ARPs) in other organisms. Member of nuclear ARP family of genes.","ACTIN-RELATED PROTEIN 8 (ARP8)","(ARP8);ACTIN-RELATED PROTEIN 8 (ARP8);ACTIN-RELATED PROTEIN 8 (ATARP8)"]
["AT2G01340","turquoise","Encodes a protein whose expression is responsive to nematode infection; PADRE protein up-regulated after infection by S. sclerotiorun.","(At17.1)","(At17.1)"]
["AT1G01720","turquoise","Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA. The mRNA is cell-to-cell mobile.","(ATAF1)","(ATAF1); (ANAC2);ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2 (ANAC002)"]
["AT5G01520","turquoise","Encodes a cytosolic RING-type E3 ubiquitin (Ub) ligase that is critical for ABA and high salinity responses during germination. AtAIRP2 and SDIR1 likely play a combinatory role in ABA signaling and the response to high salt in Arabidopsis.","ABA INSENSITIVE RING PROTEIN 2 (AIRP2)","(ATAIRP2);ABA INSENSITIVE RING PROTEIN 2 (AIRP2)"]
["AT4G13510","turquoise","Encodes a plasma membrane localized ammonium transporter. Contains a cytosolic trans-activation domain essential for ammonium uptake. The mRNA is cell-to-cell mobile.","AMMONIUM TRANSPORTER 1;1 (AMT1;1)","(ATAMT1;1);AMMONIUM TRANSPORTER 1;1 (AMT1;1);ARABIDOPSIS THALIANA AMMONIUM TRANSPORT 1 (ATAMT1)"]
["AT2G16570","turquoise","Amidophosphoribosyltransferase (ATase: EC 2.4.2.14) is a key enzyme in the pathway of purine nucleotide biosynthesis","GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 1 (ASE1)","(ATASE);GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 1 (ATASE1);GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 1 (ASE1)"]
["AT5G03470","turquoise","Encodes B' regulatory subunit of PP2A (AtB'alpha), putative size of 57 kDa.Functions redundantly with the beta subunit do maintain sister chromatid cohesion during meiosis.","(ATB' ALPHA)","(ATB' ALPHA)"]
["AT1G19660","turquoise","Encodes a bifunctional nuclease with non-substrate-specific DNase and RNase activity (PMID:32384799).Wound-responsive family protein;(source:Araport11)","BIFUNCTIONAL NUCLEASE IN BASAL DEFENSE RESPONSE 2 (BBD2)","(ATBBD2);BIFUNCTIONAL NUCLEASE IN BASAL DEFENSE RESPONSE 2 (BBD2)"]
["AT4G20830","turquoise","Encodes an oligogalacturonide oxidase that inactivates the elicitor-active oligogalacturonides (OGs). It is involved in plant immunity. Overexpressing plants are more resistant to B. cinerea.","(ATBBE19)","(ATBBE19);OLIGOGALACTURONIDE OXIDASE 1 (OGOX1)"]
["AT1G30460","turquoise","Encodes AtCPSF30, the 30-KDa subunit of cleavage and polyadenylation specificity factor. AtCPSF30 is a probable processing endonuclease. Nucleus-localized RNA binding protein capable of interacting with itself and with calmodulin. Its RNA-binding activity is inhibited by calmodulin in a calcium-dependent fashion.","CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 30 (CPSF30)","(ATC3H11);CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 30 (CPSF30);ARABIDOPSIS THALIANA CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 30 (ATCPSF30);OXIDATIVE TOLERANT-6 (OXT6)"]
["AT2G33835","turquoise","Encodes a zinc finger domain containing protein that is expressed in the shoot/root apex and vasculature, and acts with FRI to repress flowering.FES1 mutants in a Col(FRI+) background will flower early under inductive conditions.","FRIGIDA-ESSENTIAL 1 (FES1)","(ATC3H27);FRIGIDA-ESSENTIAL 1 (FES1)"]
["AT3G18640","turquoise","Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11)","(ATC3H38)","(ATC3H38)"]
["AT3G21810","turquoise","Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11)","(ATC3H40)","(ATC3H40)"]
["AT3G27700","turquoise","zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein;(source:Araport11)","(ATC3H41)","(ATC3H41)"]
["AT1G10320","turquoise","Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11)","(ATC3H5)","(ATC3H5)"]
["AT5G06420","turquoise","Zinc finger (CCCH-type/C3HC4-type RING finger) family protein;(source:Araport11)","(ATC3H51)","(ATC3H51)"]
["AT5G51980","turquoise","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)","(ATC3H63)","(ATC3H63)"]
["AT2G32260","turquoise","Phosphorylcholine cytidylyltransferase, a rate limiting enzyme in the de novo synthesis of phosphatidylcholine.","PHOSPHORYLCHOLINE CYTIDYLYLTRANSFERASE (CCT1)","(ATCCT1);PHOSPHORYLCHOLINE CYTIDYLYLTRANSFERASE (CCT1)"]
["AT2G27490","turquoise","AT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA.","(ATCOAE)","(ATCOAE)"]
["AT1G74740","turquoise","member of Calcium Dependent Protein Kinase; interferes with root growth and endomembrane trafficking.","CALCIUM-DEPENDENT PROTEIN KINASE 30 (CPK30)","(ATCPK30);CALCIUM-DEPENDENT PROTEIN KINASE 1A (CDPK1A);CALCIUM-DEPENDENT PROTEIN KINASE 30 (CPK30)"]
["AT1G27840","turquoise","Encodes a DDB1a interacting protein ATCSA-1 required for UV-B tolerance and genomic integrity. Involved in dictating the efficiency and the strand preference of repair of transcribed genes, works as the dominant protein in coupling repair to transcription with minor contribution from CSA2.","(ATCSA-1)","(ATCSA-1); (CSA1)"]
["AT5G46210","turquoise","Arabidopsis CULLIN4 (CUL4) forms an E3 ubiquitin ligase with the CDD complex and a common catalytic subunit RBX1 in mediating light control of development. This CUL4-based E3 ligase is essential for the repression of photomorphogenesis. The partial loss of CUL4 function resulted in a constitutive photomorphogenic phenotype with respect to morphogenesis and light-regulated gene expression. CUL4 exhibits a synergistic genetic interaction with COP10 and DET1.","CULLIN4 (CUL4)","(ATCUL4);CULLIN4 (CUL4)"]
["AT1G08370","turquoise","Encodes DCP1 involved in mRNA decapping. DCP1 forms a mRNA decapping complex with DCP2 (At5g13570) and VCS (VARICOSE) (At3g13300). However, unlike DCP2, DCP1 itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP2.","DECAPPING 1 (DCP1)","(ATDCP1);DECAPPING 1 (DCP1)"]
["AT2G04040","turquoise","AtDTX1 (At2g04040) has been identified as a detoxifying efflux carrier for plant-derived antibiotics and other toxic compounds, including Cd2+. Expression in rosette leaves is activated by high concentration of boron.Mistakenly referred to as At2g04070 in PMID:11739388.","DETOXIFICATION 1 (DTX1)","(ATDTX1); (TX1);DETOXIFICATION 1 (DTX1)"]
["AT5G62640","turquoise","nuclear targeted protein involved in flowering time regulation that affects flowering time independent of FLC","EARLY FLOWERING 5 (ELF5)","(AtELF5);EARLY FLOWERING 5 (ELF5)"]
["AT5G06780","turquoise","EMSY-like protein belonging to a family of nuclear histone readers known to be involved 24 in pathogen resistance. Cleavage observed in plants that co-expressed 25 the PPV or TuMV NIa proteases or in plants that were infected with TuMV.","EMSY-LIKE 2 (EML2)","(AtEML2);EMSY-LIKE 2 (EML2)"]
["AT4G03240","turquoise","Encodes AtFH, a frataxin homolog. Frataxin is required for the biogenesis of mitochondria in different organisms. AtFH knock-out mutants are lethal. Required for full activity of mitochondrial Fe-S proteins. Deficiency of AtFH induces oxidative stress.","FRATAXIN HOMOLOG (FH)","(ATFH);FRATAXIN HOMOLOG (FH)"]
["AT1G69250","turquoise","Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein;(source:Araport11)","(ATG3BP3)","(ATG3BP3); (ATG3BP-4)"]
["AT3G07520","turquoise","member of Putative ligand-gated ion channel subunit family. Contains a functional cation - permeable pore domain. Involved in cellular cation homeostasis.","GLUTAMATE RECEPTOR 1.4 (GLR1.4)","(ATGLR1.4);GLUTAMATE RECEPTOR 1.4 (GLR1.4)"]
["AT5G12840","turquoise","Encodes a subunit of CCAAT-binding complex, binds to CCAAT box motif present in some plant promoter sequences. One of three members of this class (HAP2A, HAP2B, HAP2C), it is expressed in vegetative and reproductive tissues.","NUCLEAR FACTOR Y, SUBUNIT A1 (NF-YA1)","(ATHAP2A);NUCLEAR FACTOR Y SUBUNIT A1 (NFYA1); (ATNFYA1);EMBRYO DEFECTIVE 2220 (emb2220); (HAP2A);NUCLEAR FACTOR Y, SUBUNIT A1 (NF-YA1)"]
["AT5G54080","turquoise","Encodes a homogentisate 1,2-dioxygenase that can convert homogentisate to malylacetoacetate and is likely to be involved in tyrosine catabolism.","HOMOGENTISATE 1,2-DIOXYGENASE (HGO)","(ATHGO);HOMOGENTISATE 1,2-DIOXYGENASE (HGO)"]
["AT1G51090","turquoise","Heavy metal associated domain containing protein involved in plant immunity.Mutants show an increase in root length under NO stress and reduction in root length under H2O2 stress conditions. Mutants show increases in defense responses to pathogens including hypersensitive lesions, increased resistance and induction of SAR genes.","(ATHMAD1)","(ATHMAD1);HEAVY METAL ASSOCIATED PROTEIN 9 (ATHMP09)"]
["AT5G17380","turquoise","Encodes a 2-hydroxy-phytanoyl-CoA lyase that is involved in phytol degradation by alpha-oxidation of fatty acids.","2-HYDROXY-PHYTANOYL-COA LYASE (HPCL)","(ATHPCL);2-HYDROXY-PHYTANOYL-COA LYASE (HPCL)"]
["AT1G67970","turquoise","member of Heat Stress Transcription Factor (Hsf) family","HEAT SHOCK TRANSCRIPTION FACTOR A8 (HSFA8)","(AT-HSFA8);HEAT SHOCK TRANSCRIPTION FACTOR A8 (HSFA8); (ATHSFA8)"]
["AT4G11660","turquoise","member of Heat Stress Transcription Factor (Hsf) family","(AT-HSFB2B)","(AT-HSFB2B); (HSF7);HEAT SHOCK TRANSCRIPTION FACTOR B2B (HSFB2B)"]
["AT3G24520","turquoise","member of Heat Stress Transcription Factor (Hsf) family","HEAT SHOCK TRANSCRIPTION FACTOR C1 (HSFC1)","(AT-HSFC1);HEAT SHOCK TRANSCRIPTION FACTOR C1 (HSFC1)"]
["AT1G17780","turquoise","ATG8A/F interacting protein containing a WxxL LIR motif at the C terminus which is essential for interaction with ATG8. Stress (abiotic or biotic) results in the formation of ATG8- and ATI3-labeled punctate structures, likely reflecting increased formation of ATG8-labeled phagophores or autophagosomes. ATI3 proteins probably act as selective autophagy receptors that target specific cellular components during the plant stress response. ATI3 proteins are delivered to the vacuole under ER stress in an autophagy-dependent manner.","(ATI3A)","(ATI3A)"]
["AT3G06720","turquoise","Encodes importin alpha involved in nuclear import. Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.","IMPORTIN ALPHA ISOFORM 1 (IMPA-1)","(AT-IMP); (ATKAP ALPHA);IMPORTIN ALPHA (AIMP ALPHA);IMPORTIN ALPHA ISOFORM 1 (IMPA-1);IMPORTIN ALPHA ISOFORM 1 (IMPA1)"]
["AT1G80920","turquoise","A nuclear encoded soluble protein found in the chloroplast stroma. Negatively regulated by light and has rapid turnover in darkness.","(J8)","(AtJ8);TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 12 (AtToc12);DNA J PROTEIN C22 (DJC22); (J8);TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 12 (Toc12)"]
["AT1G48500","turquoise","Jasmonate zim domain transcription factor family protein.Involved in freezing tolerance and JA iduceed leaf senesence.","JASMONATE-ZIM-DOMAIN PROTEIN 4 (JAZ4)","(ATJAZ4);JASMONATE-ZIM-DOMAIN PROTEIN 4 (JAZ4);TIFY DOMAIN PROTEIN 6A (TIFY6A)"]
["AT4G10070","turquoise","KH domain-containing protein;(source:Araport11)","(ATKH18)","(ATKH18)"]
["AT5G09400","turquoise","Encodes a potassium uptake permease with a functional adenylate cyclase (AC) center. The first 100 aa of this protein can complement AC-deficient E. coli and display AC activity in vitro. KUP7 is localized to the plasma membrane where it functions in potassium uptake and translocation.","K+ UPTAKE PERMEASE 7 (KUP7)","(ATKUP7);K+ UPTAKE PERMEASE 7 (KUP7)"]
["AT5G46250","turquoise","RNA-binding protein;(source:Araport11)","LA RELATED PROTEIN 6A (LARP6A)","(ATLARP6A);LA RELATED PROTEIN 6A (LARP6A)"]
["AT1G67230","turquoise","Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure. Member of a small gene family in Arabidopsis containing 4 proteins (LNC1-4 or CRWN 1-4) with redundant functions in protection from oxidative damage, control of nuclear morphology and degradation of ABI5.","LITTLE NUCLEI1 (LINC1)","(ATLINC1);(JAPANESE FOR NUCLEUS) 2 (KAKU2);LITTLE NUCLEI1 (LINC1);CROWDED NUCLEI 1 (CRWN1)"]
["AT5G04540","turquoise","Myotubularin-like phosphatases II superfamily;(source:Araport11)","MYOTUBULARIN 2 (MTM2)","(ATMTM2);MYOTUBULARIN 2 (MTM2)"]
["AT1G15700","turquoise","One of two genes that encode the gamma subunit of Arabidopsis chloroplast ATP synthase. It is thought to be involved in the regulation of the ATP synthase activity.","(ATPC2)","(ATPC2)"]
["AT5G16480","turquoise","Encodes an atypical dual-speci&#64257;city protein tyrosine phosphatase, affects the response of plants to high-salt conditions. Interacts directly with MPK3 and MPK6.","PLANT AND FUNGI ATYPICAL DUAL-SPECI&#64257;CITY PHOSPHATASE 5 (PFA-DSP5)","(AtPFA-DSP5);PLANT AND FUNGI ATYPICAL DUAL-SPECI&#64257;CITY PHOSPHATASE 5 (PFA-DSP5)"]
["AT4G36670","turquoise","Major facilitator superfamily protein;(source:Araport11)","POLYOL/MONOSACCHARIDE TRANSPORTER 6 (PMT6)","(AtPLT6); (AtPMT6);POLYOL TRANSPORTER 6 (PLT6);POLYOL/MONOSACCHARIDE TRANSPORTER 6 (PMT6)"]
["AT3G54850","turquoise","Encodes a protein with a typical U-box domain followed by an Armadillo repeat region, a domain organization that is frequently found in plant U-box proteins. Displays ubiquitin ligase activity in vitro. Regulator of flowering time.","PLANT U-BOX 14 (PUB14)","(ATPUB14);PLANT U-BOX 14 (PUB14)"]
["AT1G14570","turquoise","Encodes a nuclear UBX-containing protein that can bridge ubiquitin to AtCDC48A.","PLANT UBX DOMAIN-CONTAINING PROTEIN 7 (PUX7)","(ATPUX7);PLANT UBX DOMAIN-CONTAINING PROTEIN 7 (PUX7)"]
["AT4G11570","turquoise","Encodes plastid localized protein involved in riboflavin biosynthesis. It dephosphorylates 5-amino-6-ribitylamino- 2,4(1H,3H) pyrimidinedione 5&#8242;-phosphate (ARPP) .","(ATPYRP2)","(ATPYRP2)"]
["AT3G02280","turquoise","Flavoenzyme-encoding gene.","(TAH18)","(ATR3); (TAH18); (ATTAH18)"]
["AT5G21280","turquoise","Seed plant lineage specific gene that is expressed in response to oxidative and abiotic stresses.","(ATR7)","(ATR7)"]
["AT1G06400","turquoise","small GTP-binding protein (ara-2).RabGTPase functioning in anterograde trafficking from trans-Golgi network/early endosomal compartments to the plasma membrane as well as in responses to salinity stress.","(ARA-2)","(ATRAB11E); (ARA2);ARABIDOPSIS THALIANA RAB GTPASE HOMOLOG A1A (ATRABA1A); (ARA-2)"]
["AT3G19120","turquoise","PIF / Ping-Pong family of plant transposase;(source:Araport11)",null,"(ATRAD54)"]
["AT3G20650","turquoise","mRNA capping enzyme family protein;(source:Araport11)","(ATRNMT1)","(ATRNMT1)"]
["AT3G22320","turquoise","Non-catalytic subunit common to DNA-dependent RNA polymerases I, II, III and IV; homologous to budding yeast RPB5.","(NRPB5)","(ATRPABC24.3);RNA POLYMERASE II FIFTH LARGEST SUBUNIT, A (RPB5A); (NRPB5); (NRPD5)"]
["AT5G35910","turquoise","Encodes a nuclear-localized RRP6-like protein whose mutation leads to accumulation of an rRNA maturation by-product.","RRP6-LIKE 2 (RRP6L2)","(AtRRP6L2);RRP6-LIKE 2 (RRP6L2)"]
["AT5G52040","turquoise","Encodes an arginine/serine-rich splicing factor. Transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926. RS41 binds to HYL1 and co-localizes to the nuclear dicing body. Along with RS41, it appears to be involved in pri-miRNA processing and miRNA biogenesis.","ARGININE/SERINE-RICH SPLICING FACTOR 41 (RS41)","(ATRSP41);ARGININE/SERINE-RICH SPLICING FACTOR 41 (At-RS41);ARGININE/SERINE-RICH SPLICING FACTOR 41 (RS41)"]
["AT1G08600","turquoise","The Arabidopsis ATRX harbours a N-terminal ADD domain and a C-terminal helicase domain and is devoid of the large central region involved in DAXX interaction in mammals. Arabidopsis ATRX mutant alleles are viable, but with reduced fertility. Their combination with mutants for the H3.3 chaperone HIRA impairs plant survival. ATRX loss affects cellular histone H3.3 pools and modulates the H3.1/H3.3 balance. Notably, at a genome-wide scale, loss of ATRX leads to a reduced H3.3 level at genes characterized by elevated H3.3 occupancy and high expression, including the 45S ribosomal DNA (45S rDNA) loci. Indeed, expression of specific 45S rDNA sequence variants is altered by ATRX loss (DOI:10.1105/tpc.16.00877)","(ATRX)","(ATRX)"]
["AT1G32050","turquoise","SCAMP family protein;(source:Araport11)","SECRETORY CARRIER MEMBRANE PROTEIN 5 (SCAMP5)","(ATSCAMP5);SECRETORY CARRIER MEMBRANE PROTEIN 5 (SCAMP5)"]
["AT3G08760","turquoise","Encodes an osmotic stress-inducible kinase that functions as a negative regulator of osmotic stress signaling in plants.","(ATSIK)","(ATSIK)"]
["AT4G27585","turquoise","Encodes a stomatin-like protein that is present in a mitochondrial membrane-bound 3 MDa protein complex and is involved in the assembly of mitochondrial respiratory supercomplexes. There is an observed increase in abundance of respiratory complex III2 in SLP1 single and double knockout mutants. The protein is not redundant with Arabidopsis SLP2 (At5g54100).","STOMATIN-LIKE PROTEIN 1 (SLP1)","(ATSLP1);STOMATIN-LIKE PROTEIN 1 (SLP1)"]
["AT1G66740","turquoise","Located on the SSL2 region of Arabidopsis thaliana, which is homeologous to the Brassica S locus for self incompatibility. Expressed in both vegetative and reproductive organs suggesting AtSP7 might not be involved in self incompatibility. Its expression is regulated during cell cycle progression through E2F transcription factors. The protein interacts with acetylated histones H3 and H4 and HAM acetyltransferases, proteins known to be involved in cell cycle control and DNA repair. Functions redundantly with AT5G38110 during gametogenesis.","(SGA2)","(AtSP7); (SP7); (SGA2);ANTI- SILENCING FUNCTION 1A (ASF1A)"]
["AT4G01320","turquoise","CAAX protease with broad substrate specificity. Localized exclusively to the endoplasmic reticulum.","(ATSTE24)","(ATSTE24); (STE24)"]
["AT1G34370","turquoise","Encodes a putative nuclear Cys(2)His(2)-type zinc finger protein involved in H+ and Al3+ rhizotoxicity. In mutants exposed to aluminum stress, there is no induction of AtALMT1, an malate transporter known to be involved in the mediation of aluminum toxicity. Cell wall of the mutant is unstable in low pH medium (pH 4.5) in low Ca solution. This would mediate Ca-alleviation of low pH stress through pectin-Ca interaction. In vitro binding and mutated-promoter-GUS assays identified that STOP1 directly activates AtALMT1 expression through the binding to the promoter by four zinc finger domains. Binding of STOP1 to promoter is an essential step of Al-inducible AtALMT1 expression. The mRNA is cell-to-cell mobile.","SENSITIVE TO PROTON RHIZOTOXICITY 1 (STOP1)","(ATSTOP1);SENSITIVE TO PROTON RHIZOTOXICITY 1 (STOP1)"]
["AT5G19990","turquoise","26S proteasome AAA-ATPase subunit The mRNA is cell-to-cell mobile.","REGULATORY PARTICLE TRIPLE-A ATPASE 6A (RPT6A)","(ATSUG1);REGULATORY PARTICLE TRIPLE-A ATPASE 6A (RPT6A)"]
["AT4G14790","turquoise","encodes a nuclear-encoded DExH box RNA helicase, which is localized to mitochondria and whose in vitro ATPase activity is stimulated with mitochondrial RNA.","(ATSUV3)","(ATSUV3);EMBRYO SAC DEVELOPMENT ARREST 15 (EDA15);SUPPRESSOR OF VAR 3 (SUV3)"]
["AT2G16860","turquoise","GCIP-interacting family protein;(source:Araport11)","(ATSYF2)","(ATSYF2)"]
["AT5G24670","turquoise","A protein coding gene with unknown function. The 5?UTR of this gene overlaps with a RNA coding gene TER2. TER2 (GenBank accession no. HQ401285) encodes a putative template sequence corresponding to 1.5 copies of the Arabidopsis telomere repeat (PNAS 2011, 108:73-78). Natural epiallele in Nok-1, transmission of the epiallele over generations depends only on the selfreinforcing loop between CHROMOMETHYLASE 3 and KRYPTONITE, involving DNA methylated in the CHG context and histone H3 lysine 9 methylation.","EMBRYO DEFECTIVE 2820 (EMB2820)","(ATTAD3);TRNA ADENOSINE DEAMINASE 3 (TAD3);EMBRYO DEFECTIVE 2820 (EMB2820)"]
["AT1G58100","turquoise","Encodes TCP8, belongs to the TCP transcription factor family known to bind site II elements in promoter regions. Modulates GA-dependent stamen filament elongation by direct activation of SAUR63 subfamily genes through conserved target sites in their promoters. Promotes together with TCP7, 14 and 15 endoreduplication-dependent cell expansion in leaf.","TCP DOMAIN PROTEIN 8 (TCP8)","(ATTCP8);TCP DOMAIN PROTEIN 8 (TCP8)"]
["AT1G68020","turquoise","Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain and a trehalose phosphatase (TPP)-like domain. It can complement a yeast mutant lacking both of these activities suggesting that this is a bifunctional enzyme.","(ATTPS6)","(ATTPS6);TREHALOSE -6-PHOSPHATASE SYNTHASE S6 (TPS6)"]
["AT1G33980","turquoise","Involved in mRNA surveillance, detects exported mRNAs with truncated open reading frames and initiates nonsense-mediated mRNA decay (NMD). Regulates AT1G72910, AT1G72940, and ADR1-LIKE 2 in a temperature dependent manner.","(UPF3)","(ATUPF3); (UPF3)"]
["AT5G51170","turquoise","U6 snRNA phosphodiesterase-like protein;(source:Araport11)","(ATUSB1)","(ATUSB1)"]
["AT3G54860","turquoise","Homologous to yeast VPS33. Forms a complex with VCL1 and AtVPS11. Involved in vacuolar biogenesis.","(ATVPS33)","(ATVPS33);VACUOLAR PROTEIN SORTING 33 (VPS33)"]
["AT1G11060","turquoise","Encodes one of two redundant proteins (the other is WAPL2) that are involved in prophase removal of cohesion during meiosis. Double mutants with wapl2 exhibit reduced fertility due to defects in meiosis and also some abnormal embryo development in rare cases where embryos are formed.","WINGS APART-LIKE PROTEIN 1 (WAPL1)","(ATWAPL1);WINGS APART-LIKE PROTEIN 1 (WAPL1)"]
["AT1G61030","turquoise","Encodes one of two redundant proteins (the other is WAPL1) that are involved in prophase removal of cohesion during meiosis. Double mutants with wapl1 exhibit reduced fertility due to defects in meiosis and also some abnormal embryo development in rare cases where embryos are formed.","WINGS APART-LIKE PROTEIN 2 (WAPL2)","(ATWAPL2);WINGS APART-LIKE PROTEIN 2 (WAPL2)"]
["AT4G30935","turquoise","member of WRKY Transcription Factor; Group I; promoting photomorphogenesis, directly associates with the promoter regions of HY5 to activate its transcription. COP1 interacts with and targets WRKY32 for ubiquitination and degradation in darkness.","WRKY DNA-BINDING PROTEIN 32 (WRKY32)","(ATWRKY32);WRKY DNA-BINDING PROTEIN 32 (WRKY32)"]
["AT4G21350","turquoise","U-box E3 ubiquitin ligase required fore self-incompatibility and ABA mediated responses during seedling growth.","PLANT U-BOX 8 (PUB8)","(B80);PLANT U-BOX 8 (PUB8)"]
["AT1G03040","turquoise","Governs the competence of pericycle cells to initiate lateral root primordium formation.","(BHLH007)","(BHLH007);PERICYCLE FACTOR TYPE-B 2 (PFB2)"]
["AT4G02590","turquoise","Basic helix loop helix class transcriptional regulator. Shows ecotype specific effects on temperature dependent salicylic acid accumulation and immunity. Governs the competence of pericycle cells to initiate lateral root primordium formation.","UNFERTILIZED EMBRYO SAC 12 (UNE12)","(BHLH059);PERICYCLE FACTOR TYPE-B 1 (PFB1);UNFERTILIZED EMBRYO SAC 12 (UNE12)"]
["AT1G72210","turquoise","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)","(BHLH096)","(BHLH096); (BHLH96)"]
["AT2G42300","turquoise","Together with bHLH60 associates with phytochrome interacting factor 7 to regulate hypocotyl elongation.","(BHLH48)","(BHLH48)"]
["AT1G68920","turquoise","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)","CIB1 LIKE PROTEIN 1 (CIL1)","(BHLH49);CIB1 LIKE PROTEIN 1 (CIL1)"]
["AT3G57800","turquoise","Together with bHLH48 associates with phytochrome interacting factor 7 to regulate hypocotyl elongation.","(BHLH60)","(BHLH60)"]
["AT5G61140","turquoise","Encodes a predicted protein with 30% identity with MER3/RCK. Similar to yast Brr2p DEAD/DExH box ATP-dependent RNA helicase.","(BRR2C)","(BRR2C)"]
["AT2G35600","turquoise","Belongs to five-member BRX gene family. Arabidopsis BRX genes share high levels of similarity among each others, with several conserved domains. The most distinct is BRX domain - highly conserved in all BRX genes among distantly related species. This protein-protein interaction domain is required and sufficient for BRX activity.","BREVIS RADIX-LIKE 1 (BRXL1)","(BRXL1);ARABIDOPSIS THALIANA BREVIS RADIX LIKE 1 (ATBRXL1);BREVIS RADIX-LIKE 1 (BRXL1)"]
["AT2G40630","turquoise","Uncharacterized conserved protein (UCP030365);(source:Araport11)","(BTE1)","(BTE1)"]
["AT1G15280","turquoise","CASC3/Barentsz eIF4AIII binding protein;(source:Araport11)","(BTZ2)","(BTZ2)"]
["AT2G16770","turquoise","Basic-region leucine zipper (bZIP23) transcription factor involved in the adaptation to zinc deficiency. Binds ZDRE motifs.","(bZIP23)","(bZIP23); (ATBZIP23)"]
["AT3G10800","turquoise","Encodes bZIP28, a putative membrane-tethered transcriptional factor. Up-regulated in response to heat; a bZIP28 null mutant has a heat-sensitive phenotype. bZIP28 has a similar domain structure to the mammalian ATF6 protein involved in the unfolded protein response (UPR), and shares a bZIP domain, transmembrane domain, and a canonical S1P cleavage site. The bZIP28 seems to be glycosylated in vivo. bZIP28 does not appear to be transcriptionally up-regulated by UPR-inducing tunicamycin (TM) treatment. But, the expression level of three UPR-related genes is reduced in TM-treated zip28 mutants relative to wild type seedlings. And several UPR genes are transcriptionally upregulated when an N-terminal portion of the bZIP28 protein is expressed using the 35S promoter. A myc:bZIP28 fusion protein appears to be cleaved, likely at a canonical S2 cleavage site, following a TM treatment or a DTT stress-inducing treatment, but not a salt treatment. A portion of the mGFP:bZIP28 protein present in root cells appears to translocate from the cytoplasm and ER to the nucleus following TM treatment. It is cleaved by S2P to allow translocation to the nucleus. The mRNA is cell-to-cell mobile.","(BZIP28)","(BZIP28)"]
["AT2G18750","turquoise","Calmodulin-binding protein;(source:Araport11)","(CBP60C)","(CBP60C)"]
["AT4G25800","turquoise","Calmodulin-binding protein;(source:Araport11)","(CBP60D)","(CBP60D)"]
["AT5G54290","turquoise","Encodes CcdA, a thylakoid membrane protein required for the transfer of reducing equivalents from stroma to thylakoid lumen.","(CcdA)","(CcdA)"]
["AT1G55830","turquoise","Potential retriever-interacting protein; required for root and root hair growth.","(CCDC22)","(CCDC22)"]
["AT5G17860","turquoise","Cation/Ca2+ exchanger family member. Double mutants with CCX4 show delayed greening and defects in ROS response.","CALCIUM EXCHANGER 7 (CAX7)","(CCX1);CALCIUM EXCHANGER 7 (CAX7)"]
["AT5G09390","turquoise","CD2-binding protein-like protein;(source:Araport11)","(CD2B)","(CD2B)"]
["AT3G16320","turquoise","Subunit in the anaphase-promoting complex. Role in gametogenesis, control of mitotic progression and cell differentiation during the entire life cycle.","(CDC27a)","(CDC27a)"]
["AT2G20000","turquoise","Required for cell division and cell differentiation in meristems. Encodes a homolog of the CDC27 subunit of the anaphase-promoting complex (APC). Unlike other CDC27 homologs in Arabidopsis, its transcription is cell cycle regulated. Strong hbt mutants give rise to seedlings that lack an anatomically recognizable quiescent center and differentiated columella root cap cells, the cell types derived from the wild-type hypophysis. Furthermore, they have no mitotically active root meristem and lack a differentiated lateral root cap.","HOBBIT (HBT)","(CDC27b);HOBBIT (HBT)"]
["AT5G63610","turquoise","significant sequence similarity to plant and animal cyclin-dependent protein kinases, and was classified as an E-type CDK with a SPTAIRE cyclin binding motif in the kinase domain.","CYCLIN-DEPENDENT KINASE E;1 (CDKE;1)","(CDK8);CYCLIN-DEPENDENT KINASE E1 (CDKE1);CYCLIN-DEPENDENT KINASE E;1 (CDKE;1); (ATCDK8);HUA ENHANCER 3 (HEN3)"]
["AT4G34430","turquoise","Member of a small family of SWI3-like genes in Arabidopsis. Referred to as CHB4 in Zhou et al. (2002).Identified as a specific subunit of SYD-associated SWI/SNF (SAS) complexes (PMID:36471048).","(CHB3)","(CHB3);SWITCH/SUCROSE NONFERMENTING 3D (ATSWI3D)"]
["AT1G19750","turquoise","Involved in dictating the efficiency and the strand preference of repair of transcribed genes. Provides minor contribution to CSA1 in coupling repair to transcription.","(CSA-2)","(CSA-2); (CSA2)"]
["AT1G17760","turquoise","Encodes a homolog of the mammalian protein CstF77, a polyadenylation factor subunit. RNA 3&#8242;-end?processing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC. Member of CstF complex.","(CSTF77)","(CSTF77);ARABIDOPSIS THALIANA CLEAVAGE STIMULATION FACTOR 77 (ATCSTF77)"]
["AT2G29720","turquoise","Encodes CTF2B.","(CTF2B)","(CTF2B)"]
["AT5G42940","turquoise","RING/U-box superfamily protein;(source:Araport11)","(CTL06)","(CTL06)"]
["AT4G31450","turquoise","RING/U-box superfamily protein;(source:Araport11)","(CTL09)","(CTL09)"]
["AT3G19910","turquoise","RING/U-box superfamily protein;(source:Araport11)","(CTL18)","(CTL18)"]
["AT2G33740","turquoise","encodes a copper binding protein that forms tetramers in vitro. Gene is expressed in all tissues examined and protein is localized to the chloroplast. The mRNA is cell-to-cell mobile.","(CUTA)","(CUTA)"]
["AT1G25682","turquoise","coiled-coil protein (DUF572);(source:Araport11)","(CWC16A)","(CWC16A)"]
["AT4G19560","turquoise","Cyclin family protein;(source:Araport11)","(CYCT1;2)","(CYCT1;2)"]
["AT4G19600","turquoise","Encodes a cyclin T partner CYCT1;4. Plays important roles in infection with Cauliflower mosaic virus (CaMV). The mRNA is cell-to-cell mobile.","(CYCT1;4)","(CYCT1;4)"]
["AT4G07990","turquoise","Cochaperone that interacts with cpHsc70-1 in chloroplasts.","(DJC78)","(DJC78)"]
["AT4G39520","turquoise","Encodes a member of the DRG (developmentally regulated G-protein) family. Has GTPase activity.","(DRG1-1)","(DRG1-1)"]
["AT1G72660","turquoise","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","(DRG1-3)","(DRG1-3)"]
["AT2G17200","turquoise","Encodes a ubiquitin receptor protein that specifically associates with PEX2 and PEX12.","(DSK2B)","(DSK2B); (DSK2)"]
["AT1G47530","turquoise","MATE efflux family protein;(source:Araport11)","(DTX33)","(DTX33)"]
["AT1G69890","turquoise","Encodes a member of a conserved DUF domain family that is induced by NO. Based on mutant phenotype may be involved in NO stress response.","(DUF569)","(DUF569)"]
["AT5G65750","turquoise","Encodes the E1 subunit of the 2-oxoglutarate dehydrogenase.","(E1-OGDH2)","(E1-OGDH2)"]
["AT1G47870","turquoise","Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. AtE2Fc is regulated by a balance between gene expression and ubiquitin-proteasome proteolysis. AtE2Fc might play a role in cell division and during the transition from skotomorphogenesis to photomorphogenesis. E2Fc has been shown to interact with DPB in its nonphosphorylated form; when E2Fc is phosphorylated, the formation of the E2Fc/DPB heterodimer is lost. E2Fc is required for miR396 activity on cell proliferation under UV-B. Its role is independent of E2Fe, probably modulating DNA damage responses through the regulation of SOG1 and ATR transcript levels.","(ATE2F2)","(E2FC);ARABIDOPSIS THALIANA HOMOLOG OF E2F C (ATE2FC); (ATE2F2)"]
["AT5G46030","turquoise","Component of the RNA polymerase II elongation complex; associates with a subset of transcribed genes.","(ELF1)","(ELF1)"]
["AT5G04670","turquoise","Polycomb related protein that is part of a protein complex involved in histone deacetylation and heterochromatin silencing.","(EPCR2)","(EPCR2)"]
["AT3G05210","turquoise","encodes a homolog of human ERCC1 protein (yeast RAD10), which is a DNA repair endonuclease. Mutants are sensitive to UV-B and gamma radiation (G2 cell cycle phase arrest) and are defective in dark-repair of pyrimidine pyrimidone dimers. This protein incises the 5' end of damaged DNA, similar to ERCC1/RAD10.","(ERCC1)","(ERCC1);UV REPAIR DEFICIENT 7 (UVR7)"]
["AT5G64750","turquoise","Encodes a putative transcription factor containing an AP2 domain. Is a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. Expressed in response to ABA, osmotic stress, sugar stress and drought. Mutants are hypersensitive to these stresses. May be involved in regulation of ABA mediated stress response. The mRNA is cell-to-cell mobile.","ABA REPRESSOR1 (ABR1)","(ERF111);ABA REPRESSOR1 (ABR1)"]
["AT5G55000","turquoise","FH protein interacting protein FIP2","(FIP2)","(FIP2)"]
["AT1G12130","turquoise","Encodes a flavin-containing monooxygenases involved in biosynthesis of aliphatic glucosinolates.","(FMOGS-OX6)","(FMOGS-OX6)"]
["AT5G62980","turquoise","Encodes an enzyme that can act as a aldolase or an epimerase for 7,8-dihydroneopterin and 7,8-dihydromonapterin in vitro. It is likely to act in folate biosynthesis as a homooctamer in vivo.","(FOLB2)","(FOLB2)"]
["AT2G43410","turquoise","FPA is a gene that regulates flowering time in Arabidopsis via a pathway that is independent of daylength (the autonomous pathway). Mutations in FPA result in extremely delayed flowering. Double mutants with FCA have reduced fertility and single/double mutants have defects in siRNA mediated chromatin silencing.","(FPA)","(FPA)"]
["AT2G19520","turquoise","FVE interacts with SUVH9 and is involved in RNA-directed DNA methylation by facilitating the recruitment of Pol V to chromatin. It is involved in the control of flowering.","(FVE)","(FVE); (ACG1);MULTICOPY SUPPRESSOR OF IRA1 4 (MSI4); (NFC4); (NFC04); (ATMSI4)"]
["AT1G61690","turquoise","phosphoinositide binding protein;(source:Araport11)","(FYVE4)","(FYVE4)"]
["AT2G33680","turquoise","The pentatricopeptide repeat protein required for root development and high temperature tolerance.","(GEND1)","(GEND1)"]
["AT1G06130","turquoise","Glyoxalase II.","GLYOXALASE 2-4 (GLX2-4)","(GLXII.4);GLYOXALASE 2-4 (GLX2-4)"]
["AT5G11010","turquoise","Nuclear-localizing protein.","(GRC3)","(GRC3)"]
["AT4G23100","turquoise","Encodes the enzyme glutamate-cysteine ligase catalyzing the first, and rate-limiting, step of glutathione biosynthesis. Required for cell proliferation at the root tip. Involved in susceptibility to the bacterial pathogen Pseudomonas syringae. Mutants are phytoalexin defective.","GLUTAMATE-CYSTEINE LIGASE (GSH1)","(GSHA);CINNAMYL ALCOHOL DEHYDROGENASE HOMOLOG 2 (CAD2); (ATGSH1); (ATECS1);PROTEASOME ALPHA SUBUNIT D2 (PAD2);GLUTAMATE-CYSTEINE LIGASE (GSH1);CADMIUM SENSITIVE 2 (CAD2);REGULATOR OF AXILLARY MERISTEMS 1 (RAX1);ROOT MERISTEMLESS 1 (RML1);PHYTOALEXIN DEFICIENT 2 (PAD2)"]
["AT4G02520","turquoise","Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.","GLUTATHIONE S-TRANSFERASE PHI 2 (GSTF2)","(GST2);GLUTATHIONE S-TRANSFERASE PHI 2 (ATGSTF2); (ATPM24); (ATPM24.1);GLUTATHIONE S-TRANSFERASE PHI 2 (GSTF2)"]
["AT4G08350","turquoise","global transcription factor group A2;(source:Araport11)","GLOBAL TRANSCRIPTION FACTOR GROUP A2 (GTA2)","(GTA02);GLOBAL TRANSCRIPTION FACTOR GROUP A2 (GTA2); (SPT5-2)"]
["AT1G32750","turquoise","This gene is predicted to encode a histone acetyltransferase. Five lines with RNAi constructs directed against HAF1 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.","(HAF01)","(HAF01);HISTONE ACETYLTRANSFERASE OF THE TAFII250 FAMILY 1 (HAF1);HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 13 (HAC13); (GTD1);TBP-ASSOCIATED FACTOR 1 (TAF1)"]
["AT5G01160","turquoise","Encodes a member of a core set of mRNA m6A writer proteins and is required for N6-adenosine methylation of mRNA.","(HAKAI)","(HAKAI)"]
["AT3G14150","turquoise","Aldolase-type TIM barrel family protein;(source:Araport11)","(HAOX2)","(HAOX2)"]
["AT3G19510","turquoise","Encodes a member of the PHD-finger homeodomain protein family. The HAT3.1 homeodomain is highly divergent in sequence even at positions that are almost invariable among homeodomains. HAT3.1 shows a preference for the sequence T(A/G)(A/C)ACCA, different from those bound by other homeodomains.","(HAT3.1)","(HAT3.1)"]
["AT1G74310","turquoise","Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.","HEAT SHOCK PROTEIN 101 (HSP101)","(HOT1);HEAT SHOCK PROTEIN 101 (ATHSP101);HEAT SHOCK PROTEIN 101 (HSP101)"]
["AT1G54050","turquoise","Plays a role in promoting proper protein folding in response to heat stress.","(HSP17.4B)","(HSP17.4B)"]
["AT2G37470","turquoise","Histone superfamily protein;(source:Araport11)","(HTB5)","(HTB5)"]
["AT3G09480","turquoise","Histone superfamily protein;(source:Araport11)","(HTB7)","(HTB7)"]
["AT1G08170","turquoise","Histone superfamily protein;(source:Araport11)","(HTB8)","(HTB8)"]
["AT1G56460","turquoise","HIT zinc finger and PAPA-1-like domain-containing protein;(source:Araport11)","(IES2C)","(IES2C)"]
["AT3G51500","turquoise","hypothetical protein;(source:Araport11)","(INB3)","(INB3)"]
["AT2G17520","turquoise","Encodes a endoribonuclease/protein kinase IRE1-like protein that is predicted to form a type I transmembrane protein structure and contain kinase/endoribonuclease domains at their C-terminal halves. The transcript levels for several ER-stress responsive genes, including six protein disulfide isomerases (PDIs), BiP2, and AtbZIP60 are not affected in ire1-2 null mutants. The mRNA is cell-to-cell mobile.","(IRE1A)","(IRE1A);ARABIDOPSIS THALIANA INOSITOL REQUIRING 1-2 (ATIRE1-2);INOSITOL REQUIRING 1-2 (IRE1-2); (ATIRE1A)"]
["AT4G22220","turquoise","Encodes a mitochondrial protein similar to E.coli IscU. In bacteria, IscU is a scaffold protein accepting sulfur and iron to build a transient Fe-S cluster,which is subsequently transferred to a target apoprotein.","(ISU1)","(ISU1); (ATISU1)"]
["AT1G32130","turquoise","The C-terminal portion of this protein has high homology to the C-termini of the IWS1 (Interacts With Spt6) proteins found in yeast and humans. Interacts with transcription factor BES1. Involved in brassinosteroid-regulated gene expression.","(IWS1)","(IWS1);ARABIDOPSIS THALIANA IWS1 (FROM YEAST INTERACTS WITH SPT6) (ATIWS1);HIGH NITROGEN INSENSITIVE 9 (HNI9)"]
["AT4G16535","turquoise","Encodes a protein of unknown function that is involved in negative regulation of JA and ET signaling pathways.","(JAH3)","(JAH3)"]
["AT1G11950","turquoise","Transcription factor jumonji (jmjC) domain-containing protein;(source:Araport11)","(JMJ26)","(JMJ26)"]
["AT3G12130","turquoise","KHZ1 is a CCCH zinc-finger and KH domain protein belonging to the VII subfamily. It is expressed throughout the plant. Highly similar to KHZ2. khz1 mutants are late flowering and double mutants with khz2 are even more late flowering. Overexpression leads to increased rates of leaf senescence.","(KHZ1)","(KHZ1); (ATKH13); (ATC3H36)"]
["AT1G55460","turquoise","DNA/RNA-binding protein Kin17, conserved region;(source:Araport11)","(KIN17)","(KIN17); (ATKIN17)"]
["AT5G21170","turquoise","Encodes AKINbeta1, a subunit of the SnRK1 kinase (Sucrose non-fermenting-1-related protein kinase). Involved in regulation of nitrogen and sugar metabolism. As part of the regulatory subunit, it binds maltose which promotes kinase activity. Acts as a global regulator of genes involved in carbon, lipid and nitrogen metabolism.","(AKINBETA1)","(KINbeta1); (AKINBETA1)"]
["AT4G23640","turquoise","Functions as a potassium transporter and is required for the establishment of root tip growth.","TINY ROOT HAIR 1 (TRH1)","(KUP4); (ATKT3);TINY ROOT HAIR 1 (TRH1)"]
["AT2G18340","turquoise","Late embryogenesis abundant (LEA) protein involved in drought tolerance and participate in stomatal density.","(LEA13)","(LEA13)"]
["AT2G42450","turquoise","alpha/beta-Hydrolases superfamily protein;(source:Araport11)","(LEA24)","(LEA24); (COR15A)"]
["AT5G40780","turquoise","Encodes LHT1 (lysine histidine transporter), a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll.","LYSINE HISTIDINE TRANSPORTER 1 (LHT1)","(LHT1);LYSINE HISTIDINE TRANSPORTER 1 (LHT1); (ATLHT1)"]
["AT1G09970","turquoise","RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress. The mRNA is cell-to-cell mobile.","(LRR XI-23)","(LRR XI-23);RECEPTOR-LIKE KINASE 7 (RLK7)"]
["AT2G41280","turquoise","Encodes a hydrophilic protein similar to Late Embryogenesis Activated (LEA) proteins expressed during embryogenesis, which are thought to be involved in the acquisition of desiccation tolerance.","(M10)","(M10); (ATM10)"]
["AT2G41260","turquoise","Late-embryogenesis-abundant gene. Involved in the acquisition of desiccation tolerance during late phase of embryogenesis.","(M17)","(M17); (ATM17)"]
["AT5G16730","turquoise","Encodes a microtubule-associated protein. The mRNA is cell-to-cell mobile.","(MAC)","(MAC)"]
["AT4G08500","turquoise","Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002, 7(7):301. Mediates cold, salt, cadmium and wounding stress signalling. Phosphorylates MEK1.","MAPK/ERK KINASE KINASE 1 (MEKK1)","(MAPKKK8); (ATMEKK1);MAPK/ERK KINASE KINASE 1 (MEKK1); (ARAKIN)"]
["AT3G03580","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","(MEF26)","(MEF26)"]
["AT3G55270","turquoise","Encodes MAP kinase phosphatase 1 (MKP1). Loss of MKP1 results in hypersensitivity to acute UV-B stress, but without impairing UV-B acclimation.","MITOGEN-ACTIVATED PROTEIN KINASE PHOSPHATASE 1 (MKP1)","(MKP1); (AOD13);MITOGEN-ACTIVATED PROTEIN KINASE PHOSPHATASE 1 (MKP1);ARABIDOPSIS MITOGEN-ACTIVATED PROTEIN KINASE PHOSPHATASE 1 (ATMKP1)"]
["AT2G28240","turquoise","MOM1 homolog.","(MOM2)","(MOM2)"]
["AT5G50780","turquoise","MORC4 is a member of a family of GHKL ATPases. It is localized in the nuceloplasm and adjacent to chromocenters. Along with MORC7, it appears to repress the expression","(ATMORC4)","(MORC4); (ATMORC4)"]
["AT1G61990","turquoise","Mitochondrial transcription termination factor family protein;(source:Araport11)","(MTERF13)","(MTERF13)"]
["AT1G78930","turquoise","Mitochondrial transcription termination factor family protein;(source:Araport11)","(MTERF16)","(MTERF16)"]
["AT1G04300","turquoise","Encodes MUSE13, a TRAF domain protein. Regulates the turnover of nucleotide-binding domain and leucine-rich repeat-containing (NLR) immune receptors SNC1 and RPS2. Loss of both MUSE13 and MUSE14 leads to enhanced pathogen resistance, NLR accumulation, and autoimmunity.In addition, MUSE13/14 physically interact with ATG6 and appear to regulate ATG6 ubiquitination and thus formation of autophagosomes.","(MUSE13)","(MUSE13);TUMOR NECROSIS FACTOR RECEPTOR-ASSOCIATED FACTOR 1B (TRAF1B)"]
["AT5G43560","turquoise","Encodes MUSE14, a TRAF domain protein. Regulates the turnover of nucleotide-binding domain and leucine-rich repeat-containing (NLR) immune receptors SNC1 and RPS2. Loss of both MUSE13 and MUSE14 leads to enhanced pathogen resistance, NLR accumulation, and autoimmunity. In addition, MUSE13/14 physically interact with ATG6 and appear to regulate ATG6 ubiquitination and thus formation of autophagosomes.","(MUSE14)","(MUSE14);TUMOR NECROSIS FACTOR RECEPTOR-ASSOCIATED FACTOR 1A (TRAF1A)"]
["AT4G13630","turquoise","zein-binding protein (Protein of unknown function, DUF593);(source:Araport11)","(MYOB13)","(MYOB13)"]
["AT1G02080","turquoise","Acts as scaffold protein in the CCR4-NOT complex, by interacting with various NOT proteins and CAF1. Essential protein for proper pollen development and germination capacity.","(NOT1)","(NOT1)"]
["AT5G35430","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","(NOT10)","(NOT10)"]
["AT2G28540","turquoise","RNA binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)","(NOT4C)","(NOT4C)"]
["AT3G20800","turquoise","Cell differentiation, Rcd1-like protein;(source:Araport11)","(NOT9A)","(NOT9A)"]
["AT3G22900","turquoise","Non-catalytic subunit specific to DNA-directed RNA polymerase IV; homologous to budding yeast RPB7","(NRPD7)","(NRPD7)"]
["AT3G19830","turquoise","Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11)","(NTMC2T5.2)","(NTMC2TYPE5.2); (NTMC2T5.2)"]
["AT3G10650","turquoise","Encodes a nucleoporin involved in mRNA export from the nucleus. It is also involved in the regulation of nuclear morphology.","(NUP1)","(NUP1); (AtNUP1);ECTOPIC EXPRESSION OF SEED STORAGE PROTEINS 1 (ESSP1); (AtTHP1)"]
["AT2G05120","turquoise","Nucleoporin, Nup133/Nup155-like protein;(source:Araport11)","(NUP133)","(NUP133)"]
["ATMG01330","turquoise","LOW protein: NADH-ubiquinone oxidoreductase chain-like protein;(source:Araport11)","(ORF107H)","(ORF107H)"]
["AT1G65080","turquoise","Structurally distinct member of Oxa1 superfamily , has tetratricopeptide repeat (TPR) domain at the C terminus. Paralog of OXA2b.Involved in maturation of mitochondrial cytochrome c.","(OXA2A)","(OXA2A)"]
["AT4G02450","turquoise","Encodes one of two isoforms of a co-chaperone of HSP90 that is required for root growth, in particular in the maintenance of the root meristem.","(P23-1)","(P23-1)"]
["AT5G16680","turquoise","PHD protein which cooperates with AIPP2 and BAH domain protein AIPP3 to read H3K4 histone marks. The BAH-PHD bivalent histone reader complex silences a substantial subset of H3K27me3-enriched loci, including development and stress response-related genes. Interacts with BDT1, acts with other PHD proteins to associate with flowering genes and thereby suppress their transcription.","(PAIPP2)","(PAIPP2); (PHD2)"]
["AT5G61880","turquoise","Encodes PAM16L, a paralog of PAM16 (AT3G59280). PAM16 homolog; part of Presequence Translocase-Associated Motor (PAM) complex which powers the translocation of proteins across the inner membrane and consists of Hsp70, the J-domain containing co-chaperones, Pam16 and Pam18, and their associated proteins Tim15 and Mge1.","(PAM16L)","(PAM16L); (PAM16-2); (ATPAM16L)"]
["AT1G55870","turquoise","Encodes a poly(A)-specific ribonuclease, AtPARN. Expression of AtPARN is upregulated by ABA or stress treatment. Mutant is hypersensitivity to salicylic acid as well as ABA. Functions with AGS1 to regulate the poly(A) status of mitochondrial mRNA.","ABA-HYPERSENSITIVE GERMINATION 2 (AHG2)","(PARN);ARABIDOPSIS THALIANA POLY(A) RIBONUCLEASE (ATPARN);ABA-HYPERSENSITIVE GERMINATION 2 (AHG2)"]
["AT3G27010","turquoise","Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes. Inhibits pavement cell size without affecting leaf size.","TEOSINTE BRANCHED 1, CYCLOIDEA, PCF (TCP)-DOMAIN FAMILY PROTEIN 20 (TCP20)","(PCF1);TEOSINTE BRANCHED 1, CYCLOIDEA, PCF (TCP)-DOMAIN FAMILY PROTEIN 20 (TCP20); (ATTCP20);ARABIDOPSIS THALIANA TEOSINTE BRANCHED 1, CYCLOIDEA, PCF (TCP)-DOMAIN FAMILY PROTEIN 20 (AT-TCP20)"]
["AT5G23630","turquoise","A member of the eukaryotic type V subfamily (P5) of P-type ATPase cation pumps; MIA is most similar to the human P5 ATPase ATY2(44% identity) and to Spf1p from S. cerevisiae (41% identity). Highly abundant in the endoplasmic reticulum and small vesicles of developing pollen grains and tapetum cells. T-DNA insertional mutants of MIA suffer from imbalances in cation homeostasis and exhibit a severe reduction in fertility. Mutant microspores fail to separate from tetrads and pollen grains are fragile with an abnormal morphology and altered cell wall structure. MIA is also named PDR2 and was shown to be required for proper expression of SCARECROW (SCR), a key regulator of root patterning, and for stem-cell maintenance in Pi-deprived roots.","PHOSPHATE DEFICIENCY RESPONSE 2 (PDR2)","(PDR2);MALE GAMETOGENESIS IMPAIRED ANTHERS (MIA);PHOSPHATE DEFICIENCY RESPONSE 2 (PDR2)"]
["AT4G31880","turquoise","One of 5 PO76/PDS5 cohesion cofactor orthologs of Arabidopsis. Binds to and regulates the expression of ROS1 which in turn affects DNA methylation.","(PDS5C)","(PDS5C); (ATPDS5C);DEMETHYLATION REGULATOR 1 (DEMR1)"]
["AT1G43770","turquoise","PHD finger-containing protein. Interacts with BDT1, acts with other PHD proteins to associate with flowering genes and thereby suppress their transcription.","(PHD1)","(PHD1)"]
["AT1G30810","turquoise","JMJ18 encodes a novel JmjC domain- containing histone H3K4 demethylase. PHD finger-containing protein.","JUMONJI DOMAIN-CONTAINING PROTEIN 18 (JMJ18)","(PHD3);JUMONJI DOMAIN-CONTAINING PROTEIN 18 (JMJ18)"]
["AT5G49000","turquoise","F-box protein, part of SCF complex.","(PHIF1)","(PHIF1)"]
["AT5G35200","turquoise","ENTH/ANTH/VHS superfamily protein;(source:Araport11)","(PICALM3)","(PICALM3)"]
["AT4G32285","turquoise","Putative clathrin assembly protein, component of TPLATE complex that functions in clathrin-mediated endocytosis.","CLATHRIN ASSOCIATED PROTEIN 1 (CAP1)","(PICALM4B);CLATHRIN ASSOCIATED PROTEIN 1 (CAP1)"]
["AT5G62290","turquoise","Nucleotide-sensitive chloride conductance regulator (ICln) family protein that interacts with PRMT5, a component of the methylosome. Mutants show defects in splicing and may function like the human orthlog, as an adaptor mediating splicosome assembly.","(PICLN)","(PICLN)"]
["AT1G76590","turquoise","PLATZ transcription factor family protein;(source:Araport11)","(PLATZ2)","(PLATZ2)"]
["AT5G47400","turquoise","sphingomyelin phosphodiesterase;(source:Araport11)","(PNET4)","(PNET4)"]
["AT3G25800","turquoise","one of three genes encoding the protein phosphatase 2A regulatory subunit","PROTEIN PHOSPHATASE 2A SUBUNIT A2 (PP2AA2)","(PR 65);PROTEIN PHOSPHATASE 2A SUBUNIT A2 (PP2AA2); (PDF1)"]
["AT1G77800","turquoise","Functions as a scaffold protein providing a platform for interactions with other components in the PAGA complex. It not only interacts with ING1 to increase the binding affinity of ING1 for tri-methylated histone H3 but also interacts with ADA2A to increase the histone acetylation activity of GCN5.","(PRE2)","(PRE2);PACLOBUTRAZOL RESISTANCE2 (PRE2);SUBUNIT OF THE PAGA COMPLEX (SPC)"]
["AT5G09800","turquoise","Plant U-box type E3 ubiquitin ligase (PUB).","(PUB28)","(PUB28)"]
["AT5G61460","turquoise","Encodes SMC6B (STRUCTURAL MAINTENANCE OF CHROMOSOMES 6B), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.","HYPERSENSITIVE TO MMS, IRRADIATION AND MMC (MIM)","(RAD18);STRUCTURAL MAINTENANCE OF CHROMOSOMES 6B (SMC6B); (ATRAD18);HYPERSENSITIVE TO MMS, IRRADIATION AND MMC (MIM);HYPERSENSITIVE TO ZEBULARINE 1 (HZE1)"]
["AT5G16630","turquoise","DNA repair protein Rad4 family;(source:Araport11)","(RAD4)","(RAD4); (ATRAD4)"]
["AT2G31970","turquoise","Encodes the Arabidopsis RAD50 homologue. It is involved in double strand break repair. Component of the meiotic recombination complex that processes meiotic double-strand-breaks to produce single-stranded DNA ends, which act in the homology search and recombination. Accumulates in the nucleus during meiotic prophase, a process regulated by PHS1.","(RAD50)","(RAD50); (ATRAD50)"]
["AT1G79570","turquoise","Raf-like kinase required for stomatal vapor pressure difference response.","(RAF20)","(RAF20)"]
["AT3G06630","turquoise","protein kinase family protein;(source:Araport11)","(RAF8)","(RAF8)"]
["AT3G08850","turquoise","Encodes one of two Arabidopsis RAPTOR/KOG1 homologs. RAPTOR proteins are binding partners of the target of rapamycin kinase that is present in all eukaryotes and play a central role in the stimulation of cell growth and metabolism in response to nutrients. Mutants show embryo lethal phenotype which occurs at pre-globular stage. May interact with TOR kinase in a rapamycin like signaling pathway. Interacts with TOR and S6K1 in vivo. Overexpression of RAPTOR1 rendered the S6K1 osmotic stress insensitive.","(RAPTOR1)","(RAPTOR1B); (ATRAPTOR1B); (RAPTOR1)"]
["AT5G19350","turquoise","RBP45d is a component of the U1 small nuclear ribonucleoprotein and regulates alternative splicing.","(RBP45D)","(RBP45D)"]
["AT4G19700","turquoise","Encodes BOI (Botrytis Susceptible 1 Interactor). Has E3 ubiquitin ligase activity. Interacts with and ubiquitinates BOS1 (Botrytis Susceptible 1). It prevents caspase activation and attenuates cell death.","(RING)","(RING);BOTRYTIS SUSCEPTIBLE1 INTERACTOR (BOI);IAP-LIKE PROTEIN (ILP); (ATILP)"]
["AT5G19420","turquoise","Member of PRAF/RLD family of proteins. Functions in asymmetric cell division during stomatal development via polar localization of BASL mediated by GN pathway.","(PRAF9)","(RLD3); (PRAF9)"]
["AT1G24090","turquoise","RNase H family protein;(source:Araport11)","(RNH1C)","(RNH1C)"]
["AT3G25430","turquoise","Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11)","(RRD1)","(RRD1)"]
["AT5G16260","turquoise","Encodes a RNA binding protein ELF9 (EARLY FLOWERING9). Loss of ELF9 function in the Wassilewskija ecotype causes early flowering in short days. ELF9 reduces SOC1 (SUPPRESSOR OF OVEREXPRESSION OF CO1) transcript levels, possibly via nonsense-mediated mRNA decay. The mRNA is cell-to-cell mobile.","EARLY FLOWERING 9 (ELF9)","(RRM);EARLY FLOWERING 9 (ELF9)"]
["AT1G32490","turquoise","Encodes a homolog of the yeast PRP2 protein, one of four related DEAH RNA helicases identified as essential cofactors for RNA splicing. Involved in ABI4-regulated ABA signaling under high glucose condition in early seedling growth.","ENHANCED SILENCING PHENOTYPE 3 (ESP3)","(RSW12);GLUCOSE-HYPERSENSITIVE MUTANT 1 (GSM1);ENHANCED SILENCING PHENOTYPE 3 (ESP3);EMBRYO DEFECTIVE 2733 (EMB2733)"]
["AT1G62420","turquoise","Phosphorus (P) stress-inducible DUF506 gene family member; overexpression represses root hair growth; interacts with calmodulins; influences on root hair [Ca2+]cyt oscillation .","(RXR3)","(RXR3)"]
["AT2G47820","turquoise","arginine-glutamic acid dipeptide repeat protein;(source:Araport11)","(SANT3)","(SANT3)"]
["AT1G55050","turquoise","hypothetical protein;(source:Araport11)","(SANT4)","(SANT4)"]
["AT1G03760","turquoise","URI analog; prefoldinRPB5 interactor; interacts with prefoldin 2 (PFD2) and PFD6, two &#946;-type PFD members that modulate actin and tubulin patterning in roots.","(SARL)","(SARL);PREFOLDINRPB5 INTERACTOR (URI)"]
["AT5G51340","turquoise","SCC4 is a tetratricopeptide repeat containing protein and a likely component of a plant cohesion loading complex along with its partner SSC2 It is expressed primarily in dividing cells. Loss of function mutants are embryo lethal, arresting by globular stage.","(SCC4)","(SCC4)"]
["AT1G64350","turquoise","seh1-like protein","(SEH1H)","(SEH1H)"]
["AT4G00800","turquoise","transducin family protein / WD-40 repeat family protein;(source:Araport11)","(SETH5)","(SETH5);VACUOLAR PROTEIN SORTING 8 (VPS8)"]
["AT1G75370","turquoise","Sec14 protein which together with SFH7 mediates interorganelle transport of phosphatidic acid and regulates chloroplast development.","(SFH5)","(SFH5)"]
["AT1G78880","turquoise","Plasma membrane-localized proteins that negatively regulate cellulose synthesis by inhibiting the exocytosis of CESAs.","(SHOU4)","(SHOU4)"]
["AT4G27880","turquoise","Encodes an E3 ubiquitin ligase that functions in 26S proteosome pathway. Targeting of proteins for degradation such RD21A results in indirect effects such as loss of drought induced stomatal immunity.","(SINAT4)","(SINAT4)"]
["AT1G21410","turquoise","AtSKP2;1 is a homolog of human SKP2, the human F-box protein that recruits E2F1. Contains an F-box motif at the N-terminal region and a C-terminal Leu-rich repeat domain. Forms part of an E3-ubiquitin-ligase SCF (Skp1, cullin, F-box) complex and recruits phosphorylated AtE2Fc, a transcriptional factor that might play a role in cell division and during the transition from skotomorphogenesis to photomorphogenesis. AtSKP2;1 (At1g21410) and AtSKP2;2 (At1g77000) may be duplicated genes.","(SKP2A)","(SKP2A)"]
["AT5G08230","turquoise","HUA and HUA-LIKE (HULK) genes act redundantly to regulate a subset of essential genes, with some (or all) family members also having specific functions.","HUA2 LIKE 1 (HULK1)","(SL5);HUA2 LIKE 1 (HULK1)"]
["AT5G19400","turquoise","Encodes SMG7, a protein that possesses an evolutionarily conserved EST1 domain and exhibits strong homology to human SMG6 (EST1A) and SMG7 (EST1C) proteins. SMG7 plays an evolutionarily conserved role in nonsense-mediated RNA decay (NMD). Required for exit from meiosis. Hypomorphic smg7 alleles render mutant plants sterile by causing an unusual cell-cycle arrest in anaphase II that is characterized by delayed chromosome decondensation and aberrant rearrangement of the meiotic spindle. Disruption of SMG7 causes embryonic lethality.","(SMG7)","(SMG7)"]
["AT2G41710","turquoise","AP2-type transcription factor which defines the specificity for promoter binding and directly activates transcription of a specific set of SIAMESE-RELATED (SMR) family genes, encoding plant-specific inhibitors of cyclin-dependent kinases and thus inhibiting cell cycle progression at G2 and promoting the onset of endoreplication.","(SMOS1)","(SMOS1)"]
["AT2G37970","turquoise","Encodes a cytosolic heme binding protein(cHBP)that can reversibly bind tetrapyrroles including heme, protoporphyrin IX and Mg-protoporphyrin IX dimethyl ester with distinct binding af&#64257;nities.","(SOUL-1)","(SOUL-1);HAEM-BINDING PROTEIN 2 (HBP2); (ATHBP2); (SOUL2);CYTOSOLIC HEME (TETRAPYRROLE) BINDING PROTEIN 2 (CHBP2)"]
["AT3G48210","turquoise","kinetochore protein;(source:Araport11)","(SPC25)","(SPC25)"]
["AT3G62240","turquoise","RING/U-box superfamily protein;(source:Araport11)","(SRH1)","(SRH1)"]
["AT1G23860","turquoise","Encodes a 9G8-like serine-arginine rich (SR) protein that interacts in vivo with U1-70K, a U1 small nuclear ribonucleoprotein 70-kDa protein that is involved in nuclear precursor mRNA processing. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926.","RS-CONTAINING ZINC FINGER PROTEIN 21 (RSZ21)","(SRZ-21); (SRZ21);RS-CONTAINING ZINC FINGER PROTEIN 21 (At-RSZ21);RS-CONTAINING ZINC FINGER PROTEIN 21 (RSZ21);RS-CONTAINING ZINC FINGER PROTEIN 21 (RSZP21)"]
["AT1G73820","turquoise","Protein phosphatase which physically interacts with the RRM1 motif of FCA to antagonize FCA binding with COOLAIR, which is critical for PRC2 enrichment and H3K27me3 deposition.","(SSU72)","(SSU72)"]
["AT1G07130","turquoise","Encodes a protein with similarity to yeast STN1, an OB fold protein involved in protecting yeast telomeres. In Arabidopsis, loss of STN1 function mutations exhibit gross morphological abnormalities and defects in telomere architecture and maintenance. STN1 likely plays a role in telomere end capping.","(STN1)","(STN1); (ATSTN1)"]
["AT1G77180","turquoise","Encodes a putative transcriptional factor. Shows transcriptional activator activity in yeast. Involved in response to abscisic acid, salt and osmotic stress. SKIP lengthens period of the circadian clock by impairing the alternative splicing of PRR7 and PRR9. SKIP regulates the splicing of SEF pre-mRNA and suppresses flowering by activation of FLC.","SNW/SKI-INTERACTING PROTEIN (SKIP)","(SUD3);SNW/SKI-INTERACTING PROTEIN (SKIP)"]
["AT1G66770","turquoise","Nodulin MtN3 family protein;(source:Araport11)","(SWEET6)","(SWEET6); (AtSWEET6)"]
["AT5G40840","turquoise","Cohesion family protein SYN2 (SYN2). Plays a role in somatic DNA double strand break damage repair.","(SYN2)","(SYN2)"]
["AT1G70980","turquoise","Class II aminoacyl-tRNA and biotin synthetases superfamily protein;(source:Araport11)","(SYNC3)","(SYNC3)"]
["AT5G15570","turquoise","Bromodomain transcription factor;(source:Araport11)","(TAF3)","(TAF3)"]
["AT4G29000","turquoise","Tesmin/TSO1-like CXC domain-containing protein which is a transcriptional repressor of genes required for maintenance of DNA methylation, including MET1, CMT3, DDM1, KYP and VIMs. Functions redundantly with its paralogue TCX6 in repressing the expression of these genes.","(TCX5)","(TCX5)"]
["AT1G45233","turquoise","Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.","(THO5)","(THO5); (AtTHO5)"]
["AT5G27840","turquoise","Encodes a Type One Protein Phosphatase that acts as a nucleocytoplasmic negative regulator of tip growth. Mutants affect pollen germination, pollen tube growth, and root hair growth. It acts genetically downstream of ANX1 (AT3G04690) and ANX2 (AT5G28680) and is functionally redundant with ATUNIS1/TOPP9 (AT3G05580).","(TOPP8)","(TOPP8);ATUNIS2 (AUN2)"]
["AT2G17930","turquoise","Component of the SPT module of the SAGA complex.","(TRA1A)","(TRA1A)"]
["AT4G36080","turquoise","Component of the SPT module of the SAGA complex.","(TRA1B)","(TRA1B)"]
["AT1G51450","turquoise","Nuclear protein required for early embryogenesis. Encodes a structural core component of a COMPASS-like H3K4 histone methylation complex that is also involved in the timing of the floral transition and in leaf morphogenesis. Mutants are decreased in H3K4 histone trimethylation.","TRAUCO (TRO)","(TRAUCO);ARABIDOPSIS ASH2 RELATIVE (ASH2R);TRAUCO (TRO)"]
["AT2G32340","turquoise","TraB family protein that localizes to the outer mitochondrial membrane. Along with TRB1 has potential role in regulating stress induced mitophagy.","(TRB2)","(TRB2)"]
["AT5G38530","turquoise","TSBtype2 encodes a type 2 tryptophan synthase beta subunit that catalyzes a condensation reaction between serine and indole to generate tryptophan.It appears to form a homodimer. Its biological role has not yet been determined, but it has a very high affinity for indole which may be involved in allowing TSBtype2 to carefully limit free indole build-up. But, to date no overall change in plant morphology or seedling root growth have been observed in tsbtype2 mutants, indicating that this gene is not essential under optimum conditions. n most organs, TSBtype2 is transcripts are expressed at a lower level than TSB1 but in dry seeds they are expressed at comparable levels.","TRYPTOPHAN SYNTHASE BETA TYPE 2 (TSBtype2)","(TSB3);TRYPTOPHAN SYNTHASE BETA TYPE 2 (TSBtype2)"]
["AT4G02890","turquoise","Polyubiquitin gene containing 4 ubiquitin repeats.","(UBQ14)","(UBQ14)"]
["AT3G45020","turquoise","Member of the uL18 RNA-binding protein family. uL18 proteins share a short structurally conserved domain that binds the 5S rRNA and allow its incorporation into ribosomes.","(UL18-L7)","(UL18-L7)"]
["AT2G39260","turquoise","Nonsense mediated decay (NMD)factor.","(UPF2)","(UPF2)"]
["AT3G61800","turquoise","ENTH/VHS protein;(source:Araport11)","(UVSSA)","(UVSSA)"]
["AT2G01690","turquoise","Homologous to mammalian VAC14s, which is involved in the production of phosphatidylinositol 3,5-bisphosphate. Mutants are male gametophyte lethal.","(VAC1)","(VAC14); (VAC1)"]
["AT4G18600","turquoise","Encodes a member of the SCAR family.These proteins are part of a complex (WAVE) complex.The SCAR subunit activates the ARP2/3 complex which in turn act as a nucleator for actin filaments.","(WAVE5)","(WAVE5);WASP (WISKOTT-ALDRICH SYNDROME PROTEIN)-FAMILY VERPROLIN HOMOLOGOUS PROTEIN 5 (AtSCAR-LIKE); (SCARL)"]
["AT5G08560","turquoise","WRDR26 is a WD-40 repeat containing protein initially identified as an interacting partner RanBPM. Its expression is induced by abiotic stress as well as various plant growth regulators including IAA, ABA and ethylene. Role as a novel modulator of redox homeostatis, responding to developmental and stress signals to regulate leaf senescence.","(WDR26)","(WDS1); (WDR26);WD-40 REPEAT 26 (ATWDR26)"]
["AT4G12020","turquoise","Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002,7(7):301. Co-regulates with DSC1 basal levels of immunity to root-knot nematodes.","(WRKY19)","(WRKY19); (ATWRKY19);MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 11 (MAPKKK11);MAPK/ERK KINASE KINASE 4 (MEKK4)"]
["AT3G04490","turquoise","Ran effector. XPO4 coordinates the nuclear accumulation of TOPLESS and TOPLESS-Related transcription corepressors, which plays a role in regulating salicylic acid-mediated defense feedback and modulating the strength of immunity induced by cpr5, a nucleoporin mutant.","(XPO4)","(XPO4)"]
["AT5G06120","turquoise","Ran effector.","(XPO7)","(XPO7)"]
["AT4G27990","turquoise","One of four Arabidopsis homologs of bacterial ymlg proteins.","(YLMG1-2)","(YLMG1-2); (ATYLMG1-2)"]
["AT4G31430","turquoise","Encodes a plant-specific protein that physically interacts with CRWN1 and its homolog CRWN4 and localizes at the inner nuclear membrane. KAKU4 deforms the nuclear envelope in a dose-dependent manner, in association with nuclear membrane invagination and stack formation.","(JAPANESE FOR NUCLEUS) 4 (KAKU4)","(JAPANESE FOR NUCLEUS) 4 (KAKU4)"]
["AT2G44710","turquoise","RNA binding protein which cotranscriptional splicing of a key floral repressor gene FLOWERING LOCUS C (FLC), , facilitates R-loop formation near FLC intron I to repress its transcription, thereby promoting the floral transition. inhibition of cotranscriptional splicing of FLC by nuclear HRLP condensates constitutes the molecular basis for down-regulation of FLC transcript levels.",", HNRNP R-LIKE PROTEIN (HRLP)",", HNRNP R-LIKE PROTEIN (HRLP)"]
["AT5G12020","turquoise","17.6 kDa class II heat shock protein;(source:Araport11)","17.6 KDA CLASS II HEAT SHOCK PROTEIN (HSP17.6II)","17.6 KDA CLASS II HEAT SHOCK PROTEIN (HSP17.6II)"]
["AT4G33510","turquoise","Enzyme catalyzing the first committed step in aromatic amino acid biosynthesis The mRNA is cell-to-cell mobile.","3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE (DHS2)","3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE (DHS2);3-DEOXY-D-ARABINO-HEPTULOSONATE-7-PHOSPHATE 2 (DAHP2); (ATDAHP2)"]
["AT2G18250","turquoise","At2g18250 encodes pantetheine-phosphate adenylyltransferase catalyzing the formation of dephospho-CoA from pantetheine 4'-phosphate. The enzyme is involved in coenzyme A biosynthesis.","4-PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE (COAD)","4-PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE (ATCOAD);4-PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE (COAD)"]
["AT1G12350","turquoise","At1g12350 encodes phosphopantothenoylcysteine synthetase (phosphopantothenoylcysteine ligase). Its molecular function was shown to add cysteine forming (R)-4?-phospho-N-pantothenoylcysteine (PPC)","4-PHOSPHO-PANTO-THENOYLCYSTEINE SYNTHETASE (COAB)","4-PHOSPHO-PANTO-THENOYLCYSTEINE SYNTHETASE (ATCOAB);4-PHOSPHO-PANTO-THENOYLCYSTEINE SYNTHETASE (COAB)"]
["AT1G75660","turquoise","Encodes a protein with similarity to yeast 5'-3'exonucleases and can functionally complement the yeast mutations. In Arabidopsis XRN3 acts as a suppressor of posttranscriptional gene silencing. Mutants accumulate excised miRNA products suggesting that XRN3 is involved in degradation of these products.","5'-3' EXORIBONUCLEASE 3 (XRN3)","5'-3' EXORIBONUCLEASE 3 (XRN3);5'-3' EXORIBONUCLEASE 3 (AtXRN3)"]
["AT1G54060","turquoise","Member of the trihelix DNA binding protein family. Nuclear localized. Involved in repressing seed maturation genes during seed germination and seedling development.","6B-INTERACTING PROTEIN 1-LIKE 1 (ASIL1)","6B-INTERACTING PROTEIN 1-LIKE 1 (ASIL1)"]
["AT2G19490","turquoise","recA DNA recombination family protein;(source:Araport11)","A. THALIANA RECA HOMOLOG 2 (RECA2)","A. THALIANA RECA HOMOLOG 2 (RECA2)"]
["AT3G02860","turquoise","Encodes a C2H2 zinc finger protein that is localized to the nucleus and is translocated to the cytoplasm in response to ABA or oxidative stress. It functions as a positive regulator countering ABA to break seed dormancy and maintain ROS homeostasis in response to ABA and oxidative stress.","ABA AND ROS SENSITIVE 1 (ARS1)","ABA AND ROS SENSITIVE 1 (ARS1)"]
["AT2G36270","turquoise","Encodes a member of the basic leucine zipper transcription factor family, involved in ABA signalling during seed maturation and germination. The Arabidopsis abscisic acid (ABA)-insensitive abi5 mutants have pleiotropic defects in ABA response, including decreased sensitivity to ABA inhibition of germination and altered expression of some ABA-regulated genes. Comparison of seed and ABA-inducible vegetative gene expression in wild-type and abi5-1 plants indicates that ABI5 regulates a subset of late embryogenesis-abundant genes during both developmental stages. Responsible for reducing cadmium uptake, mediated by interaction with MYB49 .","ABA INSENSITIVE 5 (ABI5)","ABA INSENSITIVE 5 (ABI5)"]
["AT5G04895","turquoise","DEA(D/H)-box RNA helicase family protein;(source:Araport11)","ABA OVERLY SENSITIVE 6 (ABO6)","ABA OVERLY SENSITIVE 6 (ABO6)"]
["AT5G51760","turquoise","Encodes AHG1 (ABA-hypersensitive germination 1), a putative protein phosphatase 2C (PP2C). Expressed in seeds. AHG1 functions in seed development and germination.","ABA-HYPERSENSITIVE GERMINATION 1 (AHG1)","ABA-HYPERSENSITIVE GERMINATION 1 (AHG1)"]
["AT1G79600","turquoise","Encodes a chloroplast ABC1-like kinase that regulates vitamin E metabolism.","ABC1-LIKE KINASE 3 (ABC1K3)","ABC1-LIKE KINASE 3 (ABC1K3)"]
["AT5G11030","turquoise","alf4-1 mutation blocks initiation of lateral roots as well as callus formation. Cannot be rescued by IAA. Protein belongs to a plant-specific gene family and is localized to the nucleus.","ABERRANT LATERAL ROOT FORMATION 4 (ALF4)","ABERRANT LATERAL ROOT FORMATION 4 (ALF4)"]
["AT3G23560","turquoise","Member of the multidrug and toxic compound extrusion (MATE) family, protects roots from inhibitory compounds.","ABERRANT LATERAL ROOT FORMATION 5 (ALF5)","ABERRANT LATERAL ROOT FORMATION 5 (ALF5)"]
["AT3G07560","turquoise","Encodes peroxin 13 (PEX13) involved in protein transport into peroxisomes, for example, peroxisomal import of nitric oxide synthase.","PEROXIN 13 (PEX13)","ABERRANT PEROXISOME MORPHOLOGY 2 (APM2);PEROXIN 13 (PEX13)"]
["AT2G38185","turquoise","RING/U-box superfamily protein;(source:Araport11)","ABERRANT POLLEN DEVELOPMENT 1 (APD1)","ABERRANT POLLEN DEVELOPMENT 1 (APD1)"]
["AT5G01450","turquoise","RING/U-box superfamily protein;(source:Araport11)","ABERRANT POLLEN DEVELOPMENT 2 (APD2)","ABERRANT POLLEN DEVELOPMENT 2 (APD2)"]
["AT5G20910","turquoise","Encodes an E3 ligase that can interact with and polyubiquitinate ABI3 in vitro. AIP2 likely negatively regulates ABA signaling by targeting ABI3 for post-translational destruction.","ABI3-INTERACTING PROTEIN 2 (AIP2)","ABI3-INTERACTING PROTEIN 2 (AIP2)"]
["AT4G29010","turquoise","Functions in beta-oxidation of fatty acids, similar to CuMFP with L-3-hydroxyacyl-CoA hydrolyase , L-3-hydroxyacyl-dehydrogenase, D-3-hydroxyacyl-CoA epimerase, and 3, 2-enoyl-CoA isomerase activities.","ABNORMAL INFLORESCENCE MERISTEM (AIM1)","ABNORMAL INFLORESCENCE MERISTEM (AIM1)"]
["AT1G80070","turquoise","Encodes a factor that influences pre-mRNA splicing and is required for embryonic development. Mutations result in an abnormal suspensor and embryo lethality. The mRNA is cell-to-cell mobile.","ABNORMAL SUSPENSOR 2 (SUS2)","ABNORMAL SUSPENSOR 2 (SUS2);SUCROSE SYNTHASE 2 (SUS2);EMBRYO DEFECTIVE 33 (EMB33);EMBRYO DEFECTIVE 177 (EMB177);EMBRYO DEFECTIVE 14 (EMB14);PRE-MRNA PROCESSING 8 (PRP8)"]
["AT3G21740","turquoise","ACCUMULATION OF PHOTOSYSTEM ONE 4","ACCUMULATION OF PHOTOSYSTEM ONE 4 (APO4)","ACCUMULATION OF PHOTOSYSTEM ONE 4 (APO4)"]
["AT5G47720","turquoise","Encodes a functional acetoacetyl-CoA thiolase that is functionally redundant with AACT2. Loss-of-function mutants show no apparent growth phenotypes.","ACETOACETYL-COA THIOLASE 1 (AACT1)","ACETOACETYL-COA THIOLASE 1 (AACT1)"]
["AT3G25440","turquoise","RNA-binding CRS1 / YhbY (CRM) domain protein;(source:Araport11)","ACINUS (ACINUS)","ACINUS (ACINUS);LAG ONE HOMOLOGUE 1 (LOH1)"]
["AT1G76990","turquoise","ACT domain repeat 3;(source:Araport11)","ACT DOMAIN REPEAT 3 (ACR3)","ACT DOMAIN REPEAT 3 (ACR3)"]
["AT2G03730","turquoise","Member of a small family of ACT domain containing proteins. ACT domains are thought to be involved in amino acid binding.","ACT DOMAIN REPEAT 5 (ACR5)","ACT DOMAIN REPEAT 5 (ACR5)"]
["AT2G39570","turquoise","Encodes a ACT domain-containing protein. The ACT domain, named after bacterial aspartate kinase, chorismate mutase and TyrA (prephenate dehydrogenase), is a regulatory domain that serves as an amino acid-binding site in feedback-regulated amino acid metabolic enzymes.","ACT DOMAIN REPEATS 9 (ACR9)","ACT DOMAIN REPEATS 9 (ACR9)"]
["AT2G01330","turquoise","nucleotide binding protein;(source:Araport11)","ACTIN-INTERACTING PROTEIN 1-1 (AIP1-1)","ACTIN-INTERACTING PROTEIN 1-1 (AIP1-1)"]
["AT3G23790","turquoise","AMP-dependent synthetase and ligase family protein involved in fatty acid biosynthesis.","ACYL ACTIVATING ENZYME 16 (AAE16)","ACYL ACTIVATING ENZYME 16 (AAE16)"]
["AT5G16370","turquoise","acyl activating enzyme 5;(source:Araport11)","ACYL ACTIVATING ENZYME 5 (AAE5)","ACYL ACTIVATING ENZYME 5 (AAE5)"]
["AT5G67520","turquoise","Provides activated sulfate for the sulfation of secondary metabolites, including the glucosinolates. Redundant with APK3.","ADENOSINE-5'-PHOSPHOSULFATE (APS) KINASE 4 (APK4)","ADENOSINE-5'-PHOSPHOSULFATE (APS) KINASE 4 (APK4)"]
["AT1G33270","turquoise","Chloroplast non-regioselective lipase with a hydrolytic activity preferentially towards 16:0 of diacylglycerol (DAG). Plays important roles in balancing the two glycerolipid pathways and in maintaining lipid homeostasis in plants.","ADIPOSE TRIGLYCERIDE LIPASE-LIKE (ATGLL)","ADIPOSE TRIGLYCERIDE LIPASE-LIKE (ATGLL)"]
["AT5G10510","turquoise","Encodes an AP2-domain transcription factor involved in root stem cell identity and root development. It is also required to maintain high levels of PIN1 expression at the periphery of the meristem and modulate local auxin production in the central region of the SAM which underlies phyllotactic transitions. Intronic sequences are required for its expression in flowers.Acts redundantly with PLT5 and 7 in lateral root pattern formation.","AINTEGUMENTA-LIKE 6 (AIL6)","AINTEGUMENTA-LIKE 6 (AIL6)"]
["AT1G24490","turquoise","Homologue of the Alb3/Oxa1/YidC family. ALB4 is almost identical to the Alb3/Oxa1/YidC domain of the previously described 110 kDa inner envelope protein ARTEMIS. However, ALB4 is expressed as a separate 55 kDa protein and is located in the thylakoid membrane of chloroplasts. Analysis of a T-DNA insertion line with a reduced level of Alb4 revealed chloroplasts with an altered ultrastructure. Mutant plastids are larger, more spherical in appearance and the grana stacks within the mutant lines are less appressed than in the wild-type chloroplasts. ALB4 is required for proper chloroplast biogenesis. The mRNA is cell-to-cell mobile.","ALBINA 4 (ALB4)","ALBINA 4 (ALB4);ARABIDOPSIS THALIANA ENVELOPE MEMBRANE INTEGRASE (ARTEMIS);SUPPRESSOR OF TIC40 1 (STIC1)"]
["AT5G05610","turquoise","Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7).","ALFIN-LIKE 1 (AL1)","ALFIN-LIKE 1 (AL1)"]
["AT5G26210","turquoise","Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7).","ALFIN-LIKE 4 (AL4)","ALFIN-LIKE 4 (AL4)"]
["AT5G20510","turquoise","Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7).","ALFIN-LIKE 5 (AL5)","ALFIN-LIKE 5 (AL5)"]
["AT1G14510","turquoise","Encodes a member of the Alfin1-like family of nuclear-localized PHD (plant homeodomain) domain containing proteins. All AL proteins except AL3 bind to di- or trimethylated histone H3 (H3K4me3/2). Members of this family include: AT5G05610 (AL1), AT3G11200 (AL2), AT3G42790 (AL3), AT5G26210 (AL4), AT5G20510 (AL5), AT2G02470 (AL6), AT1G14510 (AL7).","ALFIN-LIKE 7 (AL7)","ALFIN-LIKE 7 (AL7); (ATAL7)"]
["AT1G15130","turquoise","ALIX mediates endosomal protein trafficking and turnover through the ESCRT/MVB pathway. One target is the phosphate transporter PHT1;1. Modulates ABA-mediated inhibition of plant growth and stomatal aperture (PMID:31363038).","ALG-2 INTERACTING PROTEIN-X (ALIX)","ALG-2 INTERACTING PROTEIN-X (ALIX)"]
["AT4G20350","turquoise","Putative RNA demethylase involved in seed germination, seedling growth and abiotic stress responses.","ALKB HOMOLOG 6 (ALKBH6)","ALKB HOMOLOG 6 (ALKBH6)"]
["AT2G24100","turquoise","ATP-dependent DNA helicase;(source:Araport11)","ALTERED SEED GERMINATION 1 (ASG1)","ALTERED SEED GERMINATION 1 (ASG1)"]
["AT2G44980","turquoise","SNF2 domain-containing protein / helicase domain-containing protein;(source:Araport11)","ALTERED SEED GERMINATION 3 (ASG3)","ALTERED SEED GERMINATION 3 (ASG3);CHROMATIN REMODELING 10 (CHR10)"]
["AT1G20650","turquoise","Protein kinase superfamily protein;(source:Araport11)","ALTERED SEED GERMINATION 5 (ASG5)","ALTERED SEED GERMINATION 5 (ASG5);PBS1-LIKE 21 (PBL21)"]
["AT5G27610","turquoise","protein ALWAYS EARLY 1;(source:Araport11)","ALWAYS EARLY 1 (ALY1)","ALWAYS EARLY 1 (ALY1);ARABIDOPSIS THALIANA ALWAYS EARLY 1 (ATALY1)"]
["AT3G05380","turquoise","ALWAYS EARLY 2;(source:Araport11)","ALWAYS EARLY 2 (ALY2)","ALWAYS EARLY 2 (ALY2);ARABIDOPSIS THALIANA ALWAYS EARLY 2 (ATALY2)"]
["AT4G21120","turquoise","Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. The mRNA is cell-to-cell mobile.","AMINO ACID TRANSPORTER 1 (AAT1)","AMINO ACID TRANSPORTER 1 (AAT1);CATIONIC AMINO ACID TRANSPORTER 1 (CAT1); (ATCAT1)"]
["AT3G27870","turquoise","ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11)","AMINOPHOSPHOLIPID ATPASE 8 (ALA8)","AMINOPHOSPHOLIPID ATPASE 8 (ALA8)"]
["AT1G28530","turquoise","Encodes a protein that localizes to both chloroplasts and amyloplasts and is required for both chloroplast and mesophyll development.","ANGULATA 10 (ANU10)","ANGULATA 10 (ANU10)"]
["AT5G59700","turquoise","CrRLK1L-type receptor kinase that functions along with HERK1 as the female (embryo sac) determinant of pollen tube guidance.","ANJEA (ANJ)","ANJEA (ANJ)"]
["AT3G63270","turquoise","A mutation in ANTAGONIST OF LHP1 1 (ALP1) suppresses the phenotype of lhp1 mutant plants. ALP1 interacts genetically with several PcG and trxG components and antagonizes PcG silencing. The interaction has a negative effect on polycomb-mediated gene repression since double mutant combinations of clf alp1 or lhp1 alp1 show supression of the clf and lhp1 single mutant phenotypes. ALP1 domestication probably occured at the root of angiosperm diversification coincident with mutation of conserved residues important for endonuclease activity.","ANTAGONIST OF LHP1-1 (ALP1)","ANTAGONIST OF LHP1-1 (ALP1)"]
["AT1G34780","turquoise","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.","APR-LIKE 4 (APRL4)","APR-LIKE 4 (APRL4);APR-LIKE 4 (ATAPRL4)"]
["AT2G41460","turquoise","Apurinic endonuclease-redox protein. It functions as an apurinic/apyrimidinic class II endonuclease, and is involved in DNA repair.","APURINIC ENDONUCLEASE-REDOX PROTEIN (ARP)","APURINIC ENDONUCLEASE-REDOX PROTEIN (ARP)"]
["AT4G36050","turquoise","Encodes a base excision repair protein with 3'-phosphatase activity and strong 3'-5' exonuclease activity. Together with ZDP, it plays overlapping roles in the maintenance of epigenome and genome stability in plants.","APURINIC/APYRIMIDINIC ENDONUCLEASE2 (APE2)","APURINIC/APYRIMIDINIC ENDONUCLEASE2 (APE2)"]
["AT2G44900","turquoise","ARABIDILLO-1 and its homolog, ARABIDILLO -2, are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-1 promote lateral root development. Mutant plants form fewer lateral roots, while ARABIDILLO-1-overexpressing lines produce more lateral roots than wild-type seedlings.","ARABIDILLO-1 (ARABIDILLO-1)","ARABIDILLO-1 (ARABIDILLO-1);F-BOX ARMADILLO PROTEIN 1 (ARABIDILLO1);F-BOX PROTEIN 5 (FBX5)"]
["AT3G14180","turquoise","sequence-specific DNA binding transcription factor;(source:Araport11)","ARABIDOPSIS 6B-INTERACTING PROTEIN 1-LIKE 2 (ASIL2)","ARABIDOPSIS 6B-INTERACTING PROTEIN 1-LIKE 2 (ASIL2)"]
["AT4G34370","turquoise","RING/U-box superfamily protein;(source:Araport11)","ARIADNE 1 (ARI1)","ARABIDOPSIS ARIADNE 1 (ATARI1);ARIADNE 1 (ARI1)"]
["AT3G12580","turquoise","Cytoplasmically localized member of the heat shock protein 70 family. Forms complex(heat shock granule) with J3. Mutants are heat sensitive and show increased accummulation of insoluble proteins suggesting a role in thermotolerance.","HEAT SHOCK 70 KDA PROTEIN 4 (HSP70-4)","ARABIDOPSIS HEAT SHOCK PROTEIN 70 (ATHSP70);HEAT SHOCK PROTEIN 70 (HSP70);HEAT SHOCK 70 KDA PROTEIN 4 (HSP70-4); (HSC70-4)"]
["AT1G77000","turquoise","AtSKP2;2 is a homolog of human SKP2, the human F-box protein that recruits E2F1. Contains an F-box motif at the N-terminal region and a C-terminal Leu-rich repeat domain. Forms part of an E3-ubiquitin-ligase SCF (Skp1, cullin, F-box) complex and recruits phosphorylated AtE2Fc, a transcriptional factor that might play a role in cell division and during the transition from skotomorphogenesis to photomorphogenesis. AtSKP2;1 (At1g21410) and AtSKP2;2 (At1g77000) may be duplicated genes. AtSKP2b may also be involved in the degradation of KRP1/ICK1, a CDK inhibitor.","(SKP2B)","ARABIDOPSIS HOMOLOG OF HOMOLOG OF HUMAN SKP2 2 (ATSKP2;2); (SKP2B)"]
["AT5G41360","turquoise","Encodes XPB2, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies.XPB2 preferentially expressed in developing organs and during the cell cycle.","HOMOLOG OF XERODERMA PIGMENTOSUM COMPLEMENTATION GROUP B 2 (XPB2)","ARABIDOPSIS HOMOLOG OF XERODERMA PIGMENTOSUM COMPLEMENTATION GROUP B 2 (ATXPB2);HOMOLOG OF XERODERMA PIGMENTOSUM COMPLEMENTATION GROUP B 2 (XPB2)"]
["AT4G21090","turquoise","MITOCHONDRIAL FERREDOXIN 2;(source:Araport11)","MITOCHONDRIAL FERREDOXIN 2 (MFDX2)","ARABIDOPSIS MITOCHONDRIAL FERREDOXIN 2 (ATMFDX2);MITOCHONDRIAL FERREDOXIN 2 (MFDX2)"]
["AT5G04410","turquoise","NAC family member, functions as a transcriptional activator, regulates flavonoid biosynthesis under high light. The mRNA is cell-to-cell mobile.","NAC DOMAIN CONTAINING PROTEIN 2 (NAC2)","ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 78 (anac078); (NTL11); (NAC78);NAC DOMAIN CONTAINING PROTEIN 2 (NAC2)"]
["AT5G08790","turquoise","induced by wounding, belongs to a large family of putative transcriptional activators with NAC domain.","(ATAF2)","ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 81 (anac081); (ATAF2)"]
["AT1G77360","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","ARABIDOPSIS PENTATRICOPEPTIDE REPEAT 6 (APPR6)","ARABIDOPSIS PENTATRICOPEPTIDE REPEAT 6 (APPR6)"]
["AT2G46790","turquoise","Pseudo-response regulator PRR9. Involved in clock function. PRR7 and PRR9 are partially redundant essential components of a temperature-sensitive circadian system. CCA1 and LHY had a positive effect on PRR9. Interact with TOC1 in a yeast two-hybrid assay. Acts as transcriptional repressor of CCA1 and LHY. Acts additively with EC, PRR5 and PRR7 to regulate hypocotyl growth under photoperiodic conditions.","PSEUDO-RESPONSE REGULATOR 9 (PRR9)","ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 9 (APRR9);PSEUDO-RESPONSE REGULATOR 9 (PRR9);TOC1-LIKE PROTEIN 1 (TL1)"]
["AT5G04990","turquoise","Encodes a member of the Sad1/UNC-84 (SUN)-domain proteins: AtSUN1(At5g04990), AtSUN2(AT3G10730). SUN domain proteins are part of the cytoskeletal-nucleoskeletal bridging complexes. AtSUN1 and AtSUN2 are localized to the nuclear envelope and are present as homomers and heteromers in vivo.Encodes an outer nuclear membrane protein that anchors RanGAP1 to the nuclear envelope. It interacts with WPP domain interacting-proteins (WIPs). It is involved in maintaining the elongated nuclear shape of epidermal cells.","SAD1/UNC-84 DOMAIN PROTEIN 1 (SUN1)","ARABIDOPSIS SAD1/UNC-84 DOMAIN PROTEIN 1 (ATSUN1);SAD1/UNC-84 DOMAIN PROTEIN 1 (SUN1)"]
["AT1G09730","turquoise","Encodes a SUMO protease that positively regulates the transition to flowering in long and short days. Along with SPF2, its activity is required for fertility as asp1/spf2 double mutants have defects in gametogenesis and embroygenesis.","ARABIDOPSIS SUMO PROTEASE 1 (ASP1)","ARABIDOPSIS SUMO PROTEASE 1 (ASP1);SUMO PROTEASE RELATED TO FERTILITY1 (SPF1)"]
["AT1G65440","turquoise","Related to yeast Spt6 protein, which functions as part of a protein complex in transcription initiation and also plays a role in chromatin structure / assembly. It encodes a putative WG/GW-repeat protein involved in the regulation of apical-basal polarity of embryo","GLOBAL TRANSCRIPTION FACTOR GROUP B1 (GTB1)","ARABIDOPSIS SUPPRESSOR OF TY INSERTION 6-LIKE (SPT6L);GLOBAL TRANSCRIPTION FACTOR GROUP B1 (GTB1)"]
["AT2G18670","turquoise","RING/U-box superfamily protein;(source:Araport11)","ARABIDOPSIS T??XICOS EN LEVADURA 56 (ATL56)","ARABIDOPSIS T??XICOS EN LEVADURA 56 (ATL56)"]
["AT5G01880","turquoise","RING/U-box superfamily protein;(source:Araport11)","DAF-LIKE GENE 2 (DAFL2)","ARABIDOPSIS T??XICOS EN LEVADURA 74 (ATL74);DAF-LIKE GENE 2 (DAFL2)"]
["AT4G33565","turquoise","RING/U-box superfamily protein;(source:Araport11)","ARABIDOPSIS T??XICOS EN LEVADURA 83 (ATL83)","ARABIDOPSIS T??XICOS EN LEVADURA 83 (ATL83)"]
["AT5G20960","turquoise","Encodes aldehyde oxidase AA01.","ALDEHYDE OXIDASE 1 (AO1)","ARABIDOPSIS THALIANA ALDEHYDE OXIDASE 1 (AtAO1);ALDEHYDE OXIDASE ALPHA (AOalpha);ALDEHYDE OXIDASE 1 (AAO1);ARABIDOPSIS THALIANA ALDEHYDE OXIDASE 1 (AT-AO1); (ATAO);ALDEHYDE OXIDASE 1 (AO1)"]
["AT5G41610","turquoise","member of Putative Na+/H+ antiporter family","CATION/H+ EXCHANGER 18 (CHX18)","ARABIDOPSIS THALIANA CATION/H+ EXCHANGER 18 (ATCHX18);CATION/H+ EXCHANGER 18 (CHX18)"]
["AT4G23990","turquoise","encodes a protein similar to cellulose synthase","CELLULOSE SYNTHASE LIKE G3 (CSLG3)","ARABIDOPSIS THALIANA CELLULOSE SYNTHASE-LIKE G3 (ATCSLG3);CELLULOSE SYNTHASE LIKE G3 (CSLG3)"]
["AT5G66400","turquoise","Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. ABA- and drought-induced glycine-rice dehydrin protein. The ABA-induced expression of RAB18 was reduced following ACC application, indicating that ethylene inhibits the ABA signaling pathway. RAB18 is also expressed in response to the formation of the phospholipid diacylglycerol pyrophosphate. COR47 and RAB18 double overexpressor plants are cold tolerant. Expressed in guard cells.","RESPONSIVE TO ABA 18 (RAB18)","ARABIDOPSIS THALIANA DROUGHT-INDUCED 8 (ATDI8);RESPONSIVE TO ABA 18 (RAB18)"]
["AT1G21630","turquoise","TPLATE Adaptor complex subunit.","ARABIDOPSIS THALIANA EH DOMAIN CONTAINING PROTEIN 2 (ATEH2)","ARABIDOPSIS THALIANA EH DOMAIN CONTAINING PROTEIN 2 (ATEH2)"]
["AT4G26700","turquoise","Encodes a member of the fimbrin family. Different members of the fimbrin/plastin family have diverged biochemically during evolution to generate either tight actin bundles or loose networks with distinct biochemical and biophysical properties. FIM4 generates both actin bundles and branched actin filaments whereas FIM5 only generates actin bundles.","FIMBRIN 1 (FIM1)","ARABIDOPSIS THALIANA FIMBRIN 1 (ATFIM1);FIMBRIN 1 (FIM1)"]
["AT3G46230","turquoise","Member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seeds.Induced by heat, cold, salt, drought and high-light.","HEAT SHOCK PROTEIN 17.4 (HSP17.4)","ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.4 (ATHSP17.4);HEAT SHOCK PROTEIN 17.4 (HSP17.4)"]
["AT5G54070","turquoise","A member of Heat Stress Transcription Factor (Hsf) family. Not responding to heat stress. Is regulated by the seed-specific transcription factor ABI3. In turn, it regulates other heat stress proteins including Hsp17.4-CI, Hsp17.7-CII and Hsp101 during seed maturation.","HEAT SHOCK TRANSCRIPTION FACTOR A9 (HSFA9)","ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR A9 (AT-HSFA9);HEAT SHOCK TRANSCRIPTION FACTOR A9 (HSFA9)"]
["AT5G65410","turquoise","Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family.Gain of function of ATHB25 (35S and UBQ10 proomoters) and double loss of function of ATHB25 and ATHB22 increases and decreases, respectively, seed longevity. This phenotype is maternal and related to seed coat alterations. Gain of function increases expression of GA3OX2 and GA4 and GA1 levels. Together with REM7 induces the expression of genes controlling shoot stem characteristics by ectopic expression in roots.","HOMEOBOX PROTEIN 25 (HB25)","ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 25 (ATHB25);ZINC FINGER HOMEODOMAIN 1 (ZHD1);HOMEOBOX PROTEIN 25 (HB25);ZINC FINGER HOMEODOMAIN 2 (ZFHD2)"]
["AT5G16760","turquoise","Encodes a inositol 1,3,4-trisphosphate 5/6-kinase. Catalyzes the phosphorylation of phytic acid (InsP6) to the symmetric InsP7 isomer 5-InsP7. Together with IPK1 modulate crosstalks between SA-dependent immunity and phosphate-starvation responses.","INOSITOL 1,3,4-TRISPHOSPHATE 5/6 KINASE 1 (ITPK1)","ARABIDOPSIS THALIANA INOSITOL 1,3,4-TRISPHOSPHATE 5/6 KINASE 1 (AtITPK1);INOSITOL 1,3,4-TRISPHOSPHATE 5/6 KINASE 1 (ITPK1)"]
["AT2G23240","turquoise","AtMT4b is a member of Type 4 metallothionein (MT) genes. It is involved in the early develoment of the embryo and in the accumulation of metal ions especially Zn in the seeds.","ARABIDOPSIS THALIANA METALLOTHIONEIN 4B (ATMT4B)","ARABIDOPSIS THALIANA METALLOTHIONEIN 4B (ATMT4B)"]
["AT4G09900","turquoise","Encodes a protein predicted to act as a carboxylesterase. It has similarity to the SABP2 methyl salicylate esterase from tobacco. This protein does not act on methyl IAA, methyl JA, MeSA, MeGA4, or MEGA9 in vitro.","METHYL ESTERASE 12 (MES12)","ARABIDOPSIS THALIANA METHYL ESTERASE 12 (ATMES12);METHYL ESTERASE 12 (MES12)"]
["AT3G21220","turquoise","Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4. In plants with both MKK5 and MKK4 levels reduced by RNAi plants, floral organs do not abscise suggesting a role for both proteins in mediating floral organ abscission.MKK5 is part of a positive feedback loop that regulates HAE expression in floral receptacles.","MAP KINASE KINASE 5 (MKK5)","ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5 (ATMKK5); (ATMAP2K_ALPHA); (MAP2K_A);MAP KINASE KINASE 5 (MKK5);ARABIDOPSIS THALIANA MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5 (ATMEK5);MAP KINASE KINASE 5 (MEK5)"]
["AT4G25450","turquoise","member of NAP subfamily","ATP-BINDING CASSETTE B28 (ABCB28)","ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 8 (ATNAP8);NON-INTRINSIC ABC PROTEIN 8 (NAP8);ATP-BINDING CASSETTE B28 (ABCB28)"]
["AT5G20070","turquoise","RNA-decapping activity; prefers NADH-RNA over other types of capped RNA.","NUDIX HYDROLASE HOMOLOG 19 (NUDX19)","ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 19 (atnudt19);NUDIX HYDROLASE HOMOLOG 19 (NUDX19);NUDIX HYDROLASE HOMOLOG 19 (ATNUDX19)"]
["AT5G46050","turquoise","Encodes a di- and tri-peptide transporter involved in responses to wounding, virulent bacterial pathogens, and high NaCl concentrations. The protein is predicted to have 12 transmembrane helicies.","NRT1/ PTR FAMILY 5.2 (NPF5.2)","ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 3 (ATPTR3); (ATNPF5.2);PEPTIDE TRANSPORTER 3 (PTR3);NRT1/ PTR FAMILY 5.2 (NPF5.2)"]
["AT5G65200","turquoise","Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays.","PLANT U-BOX 38 (PUB38)","ARABIDOPSIS THALIANA PLANT U-BOX 38 (ATPUB38);PLANT U-BOX 38 (PUB38)"]
["AT4G24890","turquoise","purple acid phosphatase 24;(source:Araport11)","PURPLE ACID PHOSPHATASE 24 (PAP24)","ARABIDOPSIS THALIANA PURPLE ACID PHOSPHATASE 24 (ATPAP24);PURPLE ACID PHOSPHATASE 24 (PAP24)"]
["AT1G07910","turquoise","Encodes a tRNA ligase that resembles the yeast Trl1 RNA ligase in structure and function but very different in sequence. Like Trl1, AtRNL consists of two domains, an N-terminal ligase component and a C-terminal 5'-kinase/2',3'-cyclic phosphodiesterase (CPD) component that can function in tRNA splicing in vivo when expressed as separate polypeptides. Requires a 2'-PO4 end for tRNA splicing in vivo.","RNALIGASE (RNL)","ARABIDOPSIS THALIANA RNA LIGASE (ATRNL);RNALIGASE (RNL); (RLG1);ZYGOTE-ARREST 3 (ZYG3);ATRLG1 (AtRLG1)"]
["AT3G55200","turquoise","Encodes a spliceosomal protein that is required for proper reproduction. RNAi lines display low pollen viability,caused by a defect in the transition from microspore to bicellular stage during pollen development.","SPLICEOSOME-ASSOCIATED PROTEIN 130 A (SAP130a)","ARABIDOPSIS THALIANA SPLICEOSOME-ASSOCIATED PROTEIN 130 A (AtSAP130a);SPLICEOSOME-ASSOCIATED PROTEIN 130 A (SAP130a)"]
["AT3G55220","turquoise","Encodes a spliceosomal protein that is required for proper reproduction. RNAi lines display low pollen viability,caused by a defect in the transition from microspore to bicellular stage during pollen development.","SPLICEOSOME-ASSOCIATED PROTEIN 130 B (SAP130b)","ARABIDOPSIS THALIANA SPLICEOSOME-ASSOCIATED PROTEIN 130 B (AtSAP130b);SPLICEOSOME-ASSOCIATED PROTEIN 130 B (SAP130b)"]
["AT2G26660","turquoise","SPX domain-containing protein 2 (SPX2);(source:Araport11)","SPX DOMAIN GENE 2 (SPX2)","ARABIDOPSIS THALIANA SPX DOMAIN GENE 2 (ATSPX2);SPX DOMAIN GENE 2 (SPX2)"]
["AT4G18240","turquoise","Encodes a starch synthase. In Arabidopsis leaves, the catalytic C-terminal region of STARCH SYNTHASE 4 promotes starch granule initiation while its non-catalytic N-terminal region determines starch granules morphology.","STARCH SYNTHASE 4 (SS4)","ARABIDOPSIS THALIANA STARCH SYNTHASE 4 (ATSS4);STARCH SYNTHASE 4 (SSIV);STARCH SYNTHASE 4 (SS4)"]
["AT1G03190","turquoise","UV damage and heat induce a common stress response in plants that leads to tissue death and reduced chloroplast function. The UVH6 product is suggested to be a negative regulator of this response.","ULTRAVIOLET HYPERSENSITIVE 6 (UVH6)","ARABIDOPSIS THALIANA XERODERMA PIGMENTOSUM GROUP D (ATXPD);ULTRAVIOLET HYPERSENSITIVE 6 (UVH6)"]
["AT1G22500","turquoise","Gene encodes a putative C3HC4-type RING zinc finger factor. it is induced in response to light and ascorbate stimulus.","ARABIDOPSIS TOXICOS EN LEVADURA 15 (ATL15)","ARABIDOPSIS TOXICOS EN LEVADURA 15 (ATL15); (AtATL15)"]
["AT5G40250","turquoise","RING/U-box superfamily protein;(source:Araport11)","ARABIDOPSIS TOXICOS EN LEVADURA 46 (ATL46)","ARABIDOPSIS TOXICOS EN LEVADURA 46 (ATL46)"]
["AT3G05200","turquoise","Encodes a putative RING-H2 zinc finger protein ATL6 (ATL6). The mRNA is cell-to-cell mobile.","ARABIDOPSIS TOXICOS EN LEVADURA 6 (ATL6)","ARABIDOPSIS TOXICOS EN LEVADURA 6 (ATL6)"]
["AT1G08680","turquoise","A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD14 belongs to the class 4, together with AGD15.","ARF GAP-LIKE ZINC FINGER-CONTAINING PROTEIN ZIGA4 (ZIGA4)","ARF GAP-LIKE ZINC FINGER-CONTAINING PROTEIN ZIGA4 (ZIGA4)"]
["AT1G60680","turquoise","NAD(P)-linked oxidoreductase superfamily protein;(source:Araport11)",null,"ARF-GAP DOMAIN 2 (AGD2)"]
["AT4G08900","turquoise","Encodes an arginase, likely to be involved in polyamine biosynthesis in pollen.","ARGININE AMIDOHYDROLASE 1 (ARGAH1)","ARGININE AMIDOHYDROLASE 1 (ARGAH1)"]
["AT1G16610","turquoise","Encodes SR45, a member of the highly conserved family of serine/arginine-rich (SR) proteins, which play key roles in pre-mRNA splicing and other aspects of RNA metabolism. SR45 is a spliceosome protein, interacts with SR33 and the U1-70K protein of the U1 snRNP. Also involved in plant sugar response. sr45-1 mutation confers hypersensitivity to ABA and glucose during early seedling growth. Phosphorylation at T264 controls ABA-induced accumulation.","ARGININE/SERINE-RICH 45 (SR45)","ARGININE/SERINE-RICH 45 (SR45); (ATSR45)"]
["AT3G61860","turquoise","encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926.","ARGININE/SERINE-RICH SPLICING FACTOR 31 (RS31)","ARGININE/SERINE-RICH SPLICING FACTOR 31 (ATRSP31);ARGININE/SERINE-RICH SPLICING FACTOR 31 (RSP31);ARGININE/SERINE-RICH SPLICING FACTOR 31 (At-RS31);ARGININE/SERINE-RICH SPLICING FACTOR 31 (RS31)"]
["AT3G26600","turquoise","Armadillo repeat protein. One of a family of four in Arabidopsis. Expressed in vegetative tissues, anthers and ovules.","ARMADILLO REPEAT ONLY 4 (ARO4)","ARMADILLO REPEAT ONLY 4 (ARO4)"]
["AT4G32320","turquoise","Encodes a cytosolic ascorbate peroxidase APX6. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.","ASCORBATE PEROXIDASE 6 (APX6)","ASCORBATE PEROXIDASE 6 (APX6)"]
["AT2G17900","turquoise","Homology Subgroup S-ET - Protein containing an interrupted SET domain.","SET DOMAIN GROUP 37 (SDG37)","ASH1-RELATED 1 (ASHR1);SET DOMAIN GROUP 37 (SDG37)"]
["AT1G10600","turquoise","associated molecule with the SH3 domain of STAM 2;(source:Araport11)","ASSOCIATED MOLECULE WITH THE SH3 DOMAIN OF STAM 2 (AMSH2)","ASSOCIATED MOLECULE WITH THE SH3 DOMAIN OF STAM 2 (AMSH2)"]
["AT2G17410","turquoise","AT Rich domain protein.","AT RICH INTERACTION DOMAIN 2 (ARID2)","AT RICH INTERACTION DOMAIN 2 (ARID2)"]
["AT3G09470","turquoise","Protein similar to UNC93 of C.elegans. Mutants are hypersensitive to ABA treatment and salt sensitive and have disregulated K+ accumulation.","AT UNCOORDINATED PROTEIN 93 (ATUNC93)","AT UNCOORDINATED PROTEIN 93 (ATUNC93)"]
["AT1G09250","turquoise","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)","ATBS1 INTERACTING FACTOR 4 (AIF4)","ATBS1 INTERACTING FACTOR 4 (AIF4)"]
["AT3G04590","turquoise","AHL proteins contain two conserved structural units, the AT-hook motif and DUF296 domain.","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 14 (AHL14)","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 14 (AHL14)"]
["AT3G55560","turquoise","AT-hook protein of GA feedback 2;(source:Araport11)","AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 (AHL15)","AT-HOOK PROTEIN OF GA FEEDBACK 2 (AGF2);AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 (AHL15)"]
["AT1G13690","turquoise","AtE1 - stimulates the ATPase activity of DnaK/DnaJ","ATPASE E1 (ATE1)","ATPASE E1 (ATE1)"]
["AT3G60160","turquoise","member of MRP subfamily","ATP-BINDING CASSETTE C9 (ABCC9)","ATP-BINDING CASSETTE C9 (ABCC9);MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 9 (ATMRP9);MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 9 (MRP9)"]
["AT1G03905","turquoise","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","ATP-BINDING CASSETTE I19 (ABCI19)","ATP-BINDING CASSETTE I19 (ABCI19);NON-INTRINSIC ABC PROTEIN 4 (ATNAP4)"]
["AT1G09430","turquoise","Encodes subunit A of the heteromeric enzyme ATP citrate lyase (ACL). In animals, ACL is encoded by a single gene; ACL in Arabidopsis is composed of two polypeptides, ACLA (encoded by 3 genes) and ACLB (encoded by 2 genes). The holoenzyme has an A(4)B(4)stoichiometry. Expression of both ACLA and ACLB but not of either of the subunits alone results in ACL activity.","ATP-CITRATE LYASE A-3 (ACLA-3)","ATP-CITRATE LYASE A-3 (ACLA-3)"]
["AT1G60650","turquoise","Encodes one of the zinc finger-containing glycine-rich RNA-binding proteins involved in cold tolerance: AT3G26420 (ATRZ-1A), AT1G60650 (AtRZ-1b), AT5G04280 (AtRZ-1c). It also, along with AtRZ-1c, plays important roles in plant development, pre- mRNA splicing, and general gene expression.","RNA-BINDING GLYCINE-RICH PROTEIN B1 (RBGB1)","ATRZ-1B (AtRZ-1b);RZ-1B (RZ-1b);RNA-BINDING GLYCINE-RICH PROTEIN B1 (RBGB1)"]
["AT3G18770","turquoise","Autophagy protein.Forms part of a protein kinase complex that initiates autophagosome formation.","AUTOPHAGY 13B (ATG13B)","AUTOPHAGY 13B (ATG13B)"]
["AT5G50230","turquoise","autophagy-related (ATG) gene","AUTOPHAGY 16 (ATG16)","AUTOPHAGY 16 (ATG16)"]
["AT5G17290","turquoise","Autophagy protein ATG5. Forms a conjugate with ATG12 with an essential role in plant nutrient recycling. Mutants missing ATG5 display early senescence and are hypersensitive to nitrogen or carbon starvation, accompanied by a more rapid loss of organellar and cytoplasmic proteins.","AUTOPHAGY 5 (APG5)","AUTOPHAGY 5 (ATG5); (ATATG5);AUTOPHAGY 5 (APG5)"]
["AT1G59750","turquoise","Encodes a member of the auxin response factor family. ARFs bind to the cis element 5'-TGTCTC-3' ARFs mediate changes in gene expression in response to auxin. ARF's form heterodimers with IAA/AUX genes. ARF1 enhances mutant phenotypes of ARF2 and may act with ARF2 to control aspects of maturation and senescence.ARF1:LUC and 3xHA:ARF1 proteins have a half-life of ~3-4 hours and their degradation is reduced by proteasome inhibitors. 3xHA:ARF1 degradation is not affected by a pre-treatment with IAA. A nuclear-targeted fusion protein containing the middle region of ARF1 linked to LUC:NLS has a similar half-life to the full-length ARF1:LUC construct. The degradation of 3xHA:ARF1 is not affected in an axr6-3 mutant grown at room temperature, although the degradation of AXR2/IAA7 is slowed under these conditions.","AUXIN RESPONSE FACTOR 1 (ARF1)","AUXIN RESPONSE FACTOR 1 (ARF1)"]
["AT3G61830","turquoise","auxin response factor 18;(source:Araport11)","AUXIN RESPONSE FACTOR 18 (ARF18)","AUXIN RESPONSE FACTOR 18 (ARF18)"]
["AT2G33310","turquoise","Auxin induced gene, IAA13 (IAA13).","AUXIN-INDUCED PROTEIN 13 (IAA13)","AUXIN-INDUCED PROTEIN 13 (IAA13)"]
["AT5G49450","turquoise","Encodes a transcription activator is a positive regulator of plant tolerance to salt, osmotic and drought stresses.","BASIC LEUCINE-ZIPPER 1 (bZIP1)","BASIC LEUCINE-ZIPPER 1 (bZIP1);BASIC LEUCINE-ZIPPER 1 (AtbZIP1)"]
["AT1G06070","turquoise","Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11)","BASIC LEUCINE-ZIPPER 69 (BZIP69)","BASIC LEUCINE-ZIPPER 69 (BZIP69)"]
["AT5G42520","turquoise","Encodes a member of the BASIC PENTACYSTEINE (BPC) proteins. BPC proteins are plant-specific transcription factors present throughout land plants. BPC transcription factor family is integral for a wide range of processes that support normal growth and development.","BASIC PENTACYSTEINE 6 (BPC6)","BASIC PENTACYSTEINE 6 (BPC6);ARABIDOPSIS THALIANA BASIC PENTACYSTEINE 6 (ATBPC6); (BBR/BPC6)"]
["AT2G35550","turquoise","basic pentacysteine 7;(source:Araport11)","BASIC PENTACYSTEINE 7 (BPC7)","BASIC PENTACYSTEINE 7 (BPC7); (BBR);BASIC PENTACYSTEINE 7 (ATBPC7)"]
["AT2G01930","turquoise","BASIC PENTACYSTEINE1 (BPC1) is a regulator of the homeotic Arabidopsis thaliana gene SEEDSTICK (STK), which controls ovule identity. BPC1 induces conformational changes by cooperative binding to purine-rich elements present in the STK regulatory sequence. STK is upregulated in bpc1 mutant.Along with BPC2, BPC1 binds to the promoter of and represses GALS1 thereby reducing beta 1,4- galactan accumulation.","BASIC PENTACYSTEINE1 (BPC1)","BASIC PENTACYSTEINE1 (BPC1); (BBR);BASIC PENTACYSTEINE1 (ATBPC1)"]
["AT1G28050","turquoise","B-box type zinc finger protein with CCT domain-containing protein;(source:Araport11)","B-BOX DOMAIN PROTEIN 13 (BBX13)","B-BOX DOMAIN PROTEIN 13 (BBX13)"]
["AT2G47890","turquoise","Acts as a positive regulator of red light signaling; overexpression causes markedly shortened hypocotyls under various light states. Binds to the HY5 promoter to activate its transcription, while both BBX21 and HY5 associate with its promoter to positively regulate its expression. T","B-BOX PROTEIN 11 (BBX11)","B-BOX PROTEIN 11 (BBX11)"]
["AT3G19950","turquoise","RING/U-box superfamily protein;(source:Araport11)","BCA2A ZINC FINGER ATL 8 (BTL08)","BCA2A ZINC FINGER ATL 8 (BTL08)"]
["AT1G69010","turquoise","Encodes BES1-INTERACTING MYC-LIKE 2 (BIM2), a PAR1 (PHYTOCHROME RAPIDLY REGULATED 1)-interacting protein that positively modulates the shade avoidance syndrome in Arabidopsis seedlings.","BES1-INTERACTING MYC-LIKE PROTEIN 2 (BIM2)","BES1-INTERACTING MYC-LIKE PROTEIN 2 (BIM2)"]
["AT5G52570","turquoise","Converts &#946;-carotene to zeaxanthin via cryptoxanthin.","BETA-CAROTENE HYDROXYLASE 2 (BETA-OHASE 2)","BETA-CAROTENE HYDROXYLASE 2 (BETA-OHASE 2);BETA CAROTENOID HYDROXYLASE 2 (BCH2); (CHY2); (B2)"]
["AT1G75380","turquoise","Encodes a nuclease involved in ABA-mediated callose deposition. It has been shown to interact with JAZ proteins, binds to a jasmonic acid-responsive element (JARE) and repress AtJMT expression.","BIFUNCTIONAL NUCLEASE IN BASAL DEFENSE RESPONSE 1 (BBD1)","BIFUNCTIONAL NUCLEASE IN BASAL DEFENSE RESPONSE 1 (ATBBD1);BIFUNCTIONAL NUCLEASE IN BASAL DEFENSE RESPONSE 1 (BBD1)"]
["AT3G02260","turquoise","Calossin-like protein required for polar auxin transport. Involved in regulating sugar response and C/N balance.","BIG (BIG)","BIG (BIG);DARK OVER-EXPRESSION OF CAB 1 (DOC1);TRANSPORT INHIBITOR RESPONSE 3 (TIR3);UMBRELLA 1 (UMB1);ATTENUATED SHADE AVOIDANCE 1 (ASA1);LOW PHOSPHATE-RESISTANT ROOT 1 (LPR1);CORYMBOSA1 (CRM1)"]
["AT5G45100","turquoise","Encodes one of the BRGs (BOI-related gene) involved in resistance to Botrytis cinerea.","BOI-RELATED GENE 1 (BRG1)","BOI-RELATED GENE 1 (BRG1)"]
["AT2G26000","turquoise","Encodes a RING domain containing protein BRIZ2. BRIZ1 (At2g42160) and BRIZ2 (At2g26000) proteins form a heteromeric E3 ligase complex required for seed germination and post-germination growth.","BRAP2 RING ZNF UBP DOMAIN-CONTAINING PROTEIN 2 (BRIZ2)","BRAP2 RING ZNF UBP DOMAIN-CONTAINING PROTEIN 2 (BRIZ2)"]
["AT1G14960","turquoise","Polyketide cyclase/dehydrase and lipid transport superfamily protein;(source:Araport11)",null,"BRASSIKIN1 (BKN1)"]
["AT1G63500","turquoise","kinase with tetratricopeptide repeat domain-containing protein;(source:Araport11)","BRASSINOSTEROID-SIGNALING KINASE 7 (BSK7)","BRASSINOSTEROID-SIGNALING KINASE 7 (BSK7)"]
["AT5G41260","turquoise","kinase with tetratricopeptide repeat domain-containing protein;(source:Araport11)","BRASSINOSTEROID-SIGNALING KINASE 8 (BSK8)","BRASSINOSTEROID-SIGNALING KINASE 8 (BSK8)"]
["AT1G80210","turquoise","Mov34/MPN/PAD-1 family protein;(source:Araport11)","BRCA1/BRCA2-CONTAINING COMPLEX 36 HOMOLOG A (BRCC36A)","BRCA1/BRCA2-CONTAINING COMPLEX 36 HOMOLOG A (BRCC36A); (AtBRCC36A)"]
["AT4G03080","turquoise","Protein phosphatase which promotes stomatal ACD by establishing kinase-based signalling asymmetry in the two daughter cells.","BRI1 SUPPRESSOR 1 (BSU1)-LIKE 1 (BSL1)","BRI1 SUPPRESSOR 1 (BSU1)-LIKE 1 (BSL1)"]
["AT1G08420","turquoise","Protein phosphatase which promotes stomatal ACD by establishing kinase-based signalling asymmetry in the two daughter cells.","BRI1 SUPPRESSOR 1 (BSU1)-LIKE 2 (BSL2)","BRI1 SUPPRESSOR 1 (BSU1)-LIKE 2 (BSL2)"]
["AT2G27210","turquoise","Protein phosphatase which promotes stomatal ACD by establishing kinase-based signalling asymmetry in the two daughter cells.","BRI1 SUPPRESSOR 1 (BSU1)-LIKE 3 (BSL3)","BRI1 SUPPRESSOR 1 (BSU1)-LIKE 3 (BSL3)"]
["AT1G58025","turquoise","A specific subunit of MINU1/2-associated SWI/SNF (MAS) complexes (PMID:36189880 and PMID:36471048).","BROMODOMAIN-CONTAINING PROTEIN 5 (BRD5)","BROMODOMAIN-CONTAINING PROTEIN 5 (BRD5)"]
["AT5G59570","turquoise","Encodes BOA (BROTHER OF LUX ARRHYTHMO), a component of the circadian clock. The mRNA is cell-to-cell mobile.","BROTHER OF LUX ARRHYTHMO (BOA)","BROTHER OF LUX ARRHYTHMO (BOA)"]
["AT1G05690","turquoise","BTB and TAZ domain protein. Acts redunantly with BT1 and BT2 during female gametophyte development. Acts with BT2 during male gametophyte development.","BTB AND TAZ DOMAIN PROTEIN 3 (bt3)","BTB AND TAZ DOMAIN PROTEIN 3 (bt3)"]
["AT5G67480","turquoise","BTB and TAZ domain protein. Located in cytoplasm and expressed in fruit, flower and leaves.","BTB AND TAZ DOMAIN PROTEIN 4 (BT4)","BTB AND TAZ DOMAIN PROTEIN 4 (BT4)"]
["AT1G19490","turquoise","Putative bZIP transcription factor. Expression is induced by drought and mutants are sensitive to drought.","BZIP TF 62 (BZIP62)","BZIP TF 62 (BZIP62)"]
["AT4G18160","turquoise","Encodes AtTPK3 (KCO6), a member of the Arabidopsis thaliana K+ channel family of AtTPK/KCO proteins. AtTPK3 is found in the thylakoid stromal lamellae. May form homomeric ion channels in vivo. It modulates the partitioning of the proton motive force (pmf) between the delta psi and delta pH in chloroplasts in vivo at physiological light intensities. Vacuolar K+-conducting TPC1 and TPK1/TPK3 channels act in concert to provide for Ca2+- and voltageinduced electrical excitability to the central organelle of plant cells.","CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 6 (KCO6)","CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 6 (KCO6); (ATTPK3);CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 6 (ATKCO6);TANDEM-PORE K+ CHANNEL 3 (TPK3)"]
["AT1G03910","turquoise","Encodes the Arabidopsis homolog of a conserved eukaryotic protein without known functional domains. The protein that localizes to nuclear speckles and colocalizes with known splicing proteins.","CACTIN (CTN)","CACTIN (CTN)"]
["AT4G38810","turquoise","SnRK2-Interacting Calcium Sensor. Encodes two different isoforms that can both inhibit SnRK2. The longer form (AT4G38810.2) is calcium dependant, the other is not.","CALCIUM SENSOR (SCS)","CALCIUM SENSOR (SCS); (SCS-A)"]
["AT5G66210","turquoise","Calcium Dependent Protein Kinase. Functions in the BIK1 innate immune response pathway.","CALCIUM-DEPENDENT PROTEIN KINASE 28 (CPK28)","CALCIUM-DEPENDENT PROTEIN KINASE 28 (CPK28)"]
["AT3G57530","turquoise","Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro","CALCIUM-DEPENDENT PROTEIN KINASE 32 (CPK32)","CALCIUM-DEPENDENT PROTEIN KINASE 32 (CPK32); (ATCPK32); (CDPK32)"]
["AT5G62570","turquoise","Part of plant immune signaling network.","CALMODULIN-BINDING PROTEIN 60A (CBP60A)","CALMODULIN-BINDING PROTEIN 60A (CBP60A)"]
["AT1G11350","turquoise","S-domain-1 13;(source:Araport11)","S-DOMAIN-1 13 (SD1-13)","CALMODULIN-BINDING RECEPTOR-LIKE PROTEIN KINASE (CBRLK1); (RKS2);S-DOMAIN-1 13 (SD1-13)"]
["AT4G16150","turquoise","CATMA5 is a transcriptional activator. It acts in the cold response pathway, it can bind to and activate the expression of DREB1 genes.","CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 (CAMTA5)","CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 (CAMTA5)"]
["AT5G27210","turquoise","Protein of unknown function, transmembrane-40;(source:Araport11)","CANDIDATE G-PROTEIN COUPLED RECEPTOR 8 (CAND8)","CANDIDATE G-PROTEIN COUPLED RECEPTOR 8 (CAND8)"]
["AT3G07370","turquoise","Encodes AtCHIP, a new class of E3 ubiquitin ligases with three tetratricopeptide repeats and a U-box domain, structurally similar to the animal CHIP proteins. Plays an important role in plant cellular metabolism under temperature stress conditions. Functions as an E3 ubiquitin ligase of protein phosphatase 2A subunits and alters plant response to abscisic acid treatment. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","CARBOXYL TERMINUS OF HSC70-INTERACTING PROTEIN (CHIP)","CARBOXYL TERMINUS OF HSC70-INTERACTING PROTEIN (ATCHIP);CARBOXYL TERMINUS OF HSC70-INTERACTING PROTEIN (CHIP)"]
["AT1G72710","turquoise","Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus. The mRNA is cell-to-cell mobile.","CASEIN KINASE 1-LIKE PROTEIN 2 (CKL2)","CASEIN KINASE 1-LIKE PROTEIN 2 (CKL2)"]
["AT5G47080","turquoise","Regulatory subunit beta of casein kinase II (CK2). purified CKB1 resulted in up 100-fold stimulation of casein kinase activity compared with the CKA1 activity alone. Forms a tetrameric complex with CKA1 (CKA1(2)CKB1(2)). One known substrate of CK2 is Phytochrome Interacting Factor 1 (PIF1). CK2-mediated phosphorylation enhances the light-induced degradation of PIF1 to promote photomorphogenesis.","CASEIN KINASE II BETA CHAIN 1 (CKB1)","CASEIN KINASE II BETA CHAIN 1 (CKB1)"]
["AT2G19470","turquoise","Member of CKL gene family (CKL-B group)","CASEIN KINASE I-LIKE 5 (ckl5)","CASEIN KINASE I-LIKE 5 (ckl5)"]
["AT1G73875","turquoise","Deadenylase.","CATABOLITE REPRESSOR 4E (CCR4E)","CATABOLITE REPRESSOR 4E (CCR4E)"]
["AT5G11350","turquoise","Deadenylase.","CATABOLITE REPRESSOR 4F (CCR4F)","CATABOLITE REPRESSOR 4F (CCR4F)"]
["AT5G17850","turquoise","CCX2 is a putative cation/Ca2+ exchange protein. It is located in the endoplasmic reticulum. It plays a role in salt induced calcium signaling. Loss of function results in decreased cytosolic and increased ER Ca2+ concentrations.","CATION/CA2+EXCHANGER2 (CCX2)","CATION/CA2+EXCHANGER2 (CCX2)"]
["AT3G17630","turquoise","member of Putative Na+/H+ antiporter family","CATION/H+ EXCHANGER 19 (CHX19)","CATION/H+ EXCHANGER 19 (ATCHX19);CATION/H+ EXCHANGER 19 (CHX19)"]
["AT3G53720","turquoise","member of Putative Na+/H+ antiporter family. Involved in the osmoregulation through K(+) fluxes and possibly pH modulation of an active endomembrane system in guard cells.","CATION/H+ EXCHANGER 20 (CHX20)","CATION/H+ EXCHANGER 20 (ATCHX20);CATION/H+ EXCHANGER 20 (CHX20)"]
["AT2G26980","turquoise","encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers.","CBL-INTERACTING PROTEIN KINASE 3 (CIPK3)","CBL-INTERACTING PROTEIN KINASE 3 (CIPK3)"]
["AT4G27460","turquoise","Cystathionine beta-synthase (CBS) family protein;(source:Araport11)","CBS DOMAIN CONTAINING PROTEIN 5 (CBSX5)","CBS DOMAIN CONTAINING PROTEIN 5 (CBSX5)"]
["AT1G06450","turquoise","Deadenylase.","CCR4-ASSOCIATED FACTOR 1G (CAF1G)","CCR4-ASSOCIATED FACTOR 1G (CAF1G)"]
["AT1G15920","turquoise","Deadenylase.","CCR4-ASSOCIATED FACTOR 1H (CAF1H)","CCR4-ASSOCIATED FACTOR 1H (CAF1H)"]
["AT3G53230","turquoise","CDC48 is induced upon oilseed rape mosaic tobamovirus infection and appears to be involved in controlling virus movement.","CELL DIVISION CYCLE 48B (ATCDC48B)","CELL DIVISION CYCLE 48B (ATCDC48B)"]
["AT1G56145","turquoise","LRR-malectin receptor kinase; required for cellooligomer-induced responses. Component of a recognition mechanism for both cellulose and MLG-derived oligosaccharides perception and downstream Pattern-Triggered Immunity (PTI).","CELLOOLIGOMER-RECEPTOR KINASE 1 (CORK1)","CELLOOLIGOMER-RECEPTOR KINASE 1 (CORK1);IMPAIRED IN GLYCAN PERCEPTION 1 (IGP1)"]
["AT3G14330","turquoise","Encodes a pentatricopeptide repeat protein involved in chloroplast mRNA editing. Mutants display defects in C-U editing of psbE.","CHLOROPLAST RNA EDITING FACTOR 3 (CREF3)","CHLOROPLAST RNA EDITING FACTOR 3 (CREF3)"]
["AT5G49940","turquoise","Encodes a protein containing the NFU domain and functions as a molecular scaffold for iron-sulfur cluster assembly and delivery. Homologous to the cyanobacterial CNFU protein and is targeted to the chloroplast.","NIFU-LIKE PROTEIN 2 (NFU2)","CHLOROPLAST-LOCALIZED NIFU-LIKE PROTEIN 2 (ATCNFU2);NIFU-LIKE PROTEIN 2 (NFU2)"]
["AT1G74320","turquoise","encodes a choline kinase, whose expression is induced by high salt and mannitol.","CHOLINE/ETHANOLAMINE KINASE 2 (CEK2)","CHOLINE/ETHANOLAMINE KINASE 2 (CEK2)"]
["AT5G19310","turquoise","Encodes CHR23. One of three classes of SWI/SNF ATPases. The core enzyme of MINU1/2-associated SWI/SNF (MAS) complexes (PMID:36189880,PMID:36471048).Overexpression results in increased variability of growth and gene expression.","CHROMATIN REMODELING 23 (CHR23)","CHROMATIN REMODELING 23 (CHR23); (MINU2); (ATCHR23)"]
["AT2G13370","turquoise","Chromatin-remodeling factor; has large number of MAPK docking sites (D-sites).","CHROMATIN REMODELING 5 (CHR5)","CHROMATIN REMODELING 5 (CHR5)"]
["AT3G06400","turquoise","Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature. Double mutation in CHR17 and CHR11 results in the loss of the evenly spaced nucleosome pattern in gene bodies, but does not affect nucleosome density.","CHROMATIN-REMODELING PROTEIN 11 (CHR11)","CHROMATIN-REMODELING PROTEIN 11 (CHR11)"]
["AT1G72680","turquoise","Similar to cinnamyl-alcohol dehydrogenases but catalytic activity is low.","CINNAMYL-ALCOHOL DEHYDROGENASE (CAD1)","CINNAMYL ALCOHOL DEHYDROGENASE 1 (ATCAD1);CINNAMYL-ALCOHOL DEHYDROGENASE (CAD1)"]
["AT4G10100","turquoise","molybdenum cofactor synthesis family protein, similar to Molybdenum cofactor synthesis protein 2 small subunit (Molybdopterin- synthase small subunit) (MOCS2A) (MOCO1-A) (Swiss-Prot:O96033) (Homo sapiens); contains TIGRFAM TIGR01682: molybdopterin converting factor, subunit 1; sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.","CO-FACTOR FOR NITRATE, REDUCTASE AND XANTHINE DEHYDROGENASE 7 (CNX7)","CO-FACTOR FOR NITRATE, REDUCTASE AND XANTHINE DEHYDROGENASE 7 (CNX7); (SIR5)"]
["AT2G31955","turquoise","COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2. Encodes a protein involved in molybdenum cofactor biosynthesis. Homologous to E.coli moaA. Expression is abundant in all tissues examined, particularly in roots. Appears to have targeting signals for chloroplast or mitochondria.","COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2 (CNX2)","COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 2 (CNX2)"]
["AT2G43760","turquoise","molybdopterin biosynthesis MoaE family protein;(source:Araport11)","COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 6 (CNX6)","COFACTOR OF NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 6 (CNX6)"]
["AT4G36020","turquoise","Encodes a cold shock domain protein. Involved in cold acclimation by blocking the secondary structure of mRNA which in turn facilitates translation at cold temperature.","COLD SHOCK DOMAIN PROTEIN 1 (CSDP1)","COLD SHOCK DOMAIN PROTEIN 1 (CSDP1);COLD SHOCK PROTEIN 1 (CSP1); (ATCSP1)"]
["AT4G33980","turquoise","Acts with COR27 as a key regulator in the COP1-HY5 regulatory hub by regulating HY5 activity to ensure proper skotomorphogenic growth in the dark and photomorphogenic development in the light.","COLD-REGULATED GENE 28 (COR28)","COLD-REGULATED GENE 28 (COR28);HYPOXIA RESPONSE UNKNOWN PROTEIN 41 (HUP41)"]
["AT1G16670","turquoise","Encodes a cold-activated plasma membrane protein cold-responsive protein kinase that phosphorylates 14-3-3 proteins. The phosphorylated 14-3-3 proteins shuttle from the cytosol to the nucleus, where they interact with and destabilize the key cold-responsive C-repeat-binding factor (CBF) proteins, modulate CBF stability and the response to cold stress.","COLD-RESPONSIVE PROTEIN KINASE 1 (CRPK1)","COLD-RESPONSIVE PROTEIN KINASE 1 (CRPK1)"]
["AT4G09680","turquoise","Encodes CTC1 (Conserved Telomere Maintenance Component 1) involved in telomere maintenance.","CONSERVED TELOMERE MAINTENANCE COMPONENT 1 (CTC1)","CONSERVED TELOMERE MAINTENANCE COMPONENT 1 (CTC1); (ATCTC1)"]
["AT3G21290","turquoise","Nuclear-localized intrinsically disordered protein involved in promoting miRNA activity.","CONSTITUTIVE ALTERATIONS IN THE SMALL RNAS PATHWAYS9 (CARP9)","CONSTITUTIVE ALTERATIONS IN THE SMALL RNAS PATHWAYS9 (CARP9)"]
["AT5G64930","turquoise","Regulator of expression of pathogenesis-related (PR) genes. Participates in signal transduction pathways involved in plant defense (systemic acquired resistance -SAR).The cpr5 mutant has a small number of trichome branches, the trichome volume decreases.","CONSTITUTIVE EXPRESSION OF PR GENES 5 (CPR5)","CONSTITUTIVE EXPRESSION OF PR GENES 5 (CPR5);ONSET OF LEAF DEATH 1 (OLD1);HYPERSENESCENCE 1 (HYS1); (OLD1)"]
["AT1G02330","turquoise","Encodes a nuclear coiled-coil domain-containing protein that interacts with and negatively regulates COP1's E3 ubiquitin ligase activity, and represses COP1 mediated HY5 degradation in cell-free extracts.","COP1 SUPPRESSOR 2 (CSU2)","COP1 SUPPRESSOR 2 (CSU2)"]
["AT4G00930","turquoise","Encodes COP1-interacting protein CIP4.1.","COP1-INTERACTING PROTEIN 4.1 (CIP4.1)","COP1-INTERACTING PROTEIN 4.1 (CIP4.1)"]
["AT4G26430","turquoise","one of two genes encoding subunit 6 of COP9 signalosome complex","COP9 SIGNALOSOME SUBUNIT 6B (CSN6B)","COP9 SIGNALOSOME SUBUNIT 6B (CSN6B)"]
["AT5G18100","turquoise","A putative peroxisomal CuZnSOD inducible by a high-light pulse.","COPPER/ZINC SUPEROXIDE DISMUTASE 3 (CSD3)","COPPER/ZINC SUPEROXIDE DISMUTASE 3 (CSD3)"]
["AT1G76560","turquoise","CP12 domain-containing protein 3;(source:Araport11)","CP12 DOMAIN-CONTAINING PROTEIN 3 (CP12-3)","CP12 DOMAIN-CONTAINING PROTEIN 3 (CP12-3)"]
["AT5G65770","turquoise","Encodes a protein that localizes to the nuclear periphery and affects nuclear morphology. Member of a small gene family in Arabidopsis containing 4 proteins (LNC1-4 or CRWN 1-4) with redundant functions in protection from oxidative damage, control of nuclear morphology and degradation of ABI5.","LITTLE NUCLEI4 (LINC4)","CROWDED NUCLEI 4 (CRWN4);LITTLE NUCLEI4 (LINC4)"]
["AT4G00450","turquoise","Encodes the Arabidopsis homolog of the transcriptional regulator MED12, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation. Involved in flowering time. The mutant enhances the expression of the flowering time (FT) gene. A knockout mutant of this gene showed late-flowering phenotype.","CENTER CITY (CCT)","CRYPTIC PRECOCIOUS (CRP);CENTER CITY (CCT);GRAND CENTRAL (GCT);MEDIATOR 12 (MED12)"]
["AT1G32790","turquoise","RNA-binding protein, putative, similar to RNA-binding protein GB:CAB40027 GI:4539439 from (Arabidopsis thaliana).Member of a family of PAB2 binding domain proteins.","CTC-INTERACTING DOMAIN 11 (CID11)","CTC-INTERACTING DOMAIN 11 (CID11)"]
["AT1G54170","turquoise","ataxin-2-related, similar to SCA2 (GI:1770390) (Homo sapiens); similar to ataxin-2 (GI:3005020) (Mus musculus). Member of a family of PAM2 motif containing proteins.","CTC-INTERACTING DOMAIN 3 (CID3)","CTC-INTERACTING DOMAIN 3 (CID3)"]
["AT5G43660","turquoise","Belongs to the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily proteins and contains an oxoglutarate/iron-dependent oxygenase domain (InterPro:IPR005123) of the prolyl 4-hydroxylase, alpha subunit subtype (P4Hc; InterPro:IPR006620).","CUPULIFORMIS3 (CP3)","CUPULIFORMIS3 (CP3)"]
["AT1G47230","turquoise","Post-prophase target of anaphase promoting complex/cyclosome E3-ligase controlling formative cell divisions.","CYCLIN A3;4 (CYCA3;4)","CYCLIN A3;4 (CYCA3;4)"]
["AT5G10270","turquoise","Encodes CDKC;1, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development.","CYCLIN-DEPENDENT KINASE C;1 (CDKC;1)","CYCLIN-DEPENDENT KINASE C;1 (CDKC;1)"]
["AT5G64960","turquoise","Encodes CDKC;2, part of a CDKC kinase complex that is targeted by Cauliflower mosaic virus (CaMV) for transcriptional activation of viral genes. Also regulates plant growth and development. Co-localizes with spliceosomal components in a manner dependent on the transcriptional status of the cells and on CDKC2-kinase activity. Expression of CDKC2 modifies the location of spliceosomal components.","CYCLIN DEPENDENT KINASE GROUP C2 (CDKC2)","CYCLIN-DEPENDENT KINASE C;2 (CDKC;2);CYCLIN DEPENDENT KINASE GROUP C2 (CDKC2)"]
["AT5G39660","turquoise","Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.","CYCLING DOF FACTOR 2 (CDF2)","CYCLING DOF FACTOR 2 (CDF2)"]
["AT4G33060","turquoise","Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein;(source:Araport11)","CYCLOPHILIN 57 (CYP57)","CYCLOPHILIN 57 (CYP57); (ATCYP57)"]
["AT5G56090","turquoise","Encodes a homolog of COX15. Microarray analysis show a 3.2 fold increase in transcription after treatment with rotenone, an electron transport chain inhibitor.","CYTOCHROME C OXIDASE 15 (COX15)","CYTOCHROME C OXIDASE 15 (COX15)"]
["AT2G45510","turquoise","member of CYP704A","CYTOCHROME P450, FAMILY 704, SUBFAMILY A, POLYPEPTIDE 2 (CYP704A2)","CYTOCHROME P450, FAMILY 704, SUBFAMILY A, POLYPEPTIDE 2 (CYP704A2)"]
["AT2G29090","turquoise","Encodes a protein with ABA 8'-hydroxylase activity, involved in ABA catabolism. Member of the CYP707A gene family. This gene predominantly accumulates in dry seeds and is up-regulated immediately following imbibition. CYP707A2 appears to play a major role in the rapid decrease in ABA levels during early seed imbibition.","CYTOCHROME P450, FAMILY 707, SUBFAMILY A, POLYPEPTIDE 2 (CYP707A2)","CYTOCHROME P450, FAMILY 707, SUBFAMILY A, POLYPEPTIDE 2 (CYP707A2)"]
["AT5G57260","turquoise","putative cytochrome P450","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 10 (CYP71B10)","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 10 (CYP71B10)"]
["AT3G26165","turquoise","putative cytochrome P450.","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 18 (CYP71B18)","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 18 (CYP71B18)"]
["AT3G26295","turquoise","putative cytochrome P450.","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 33 (CYP71B33)","CYTOCHROME P450, FAMILY 71, SUBFAMILY B, POLYPEPTIDE 33 (CYP71B33)"]
["AT3G14660","turquoise","putative cytochrome P450 The mRNA is cell-to-cell mobile.","CYTOCHROME P450, FAMILY 72, SUBFAMILY A, POLYPEPTIDE 13 (CYP72A13)","CYTOCHROME P450, FAMILY 72, SUBFAMILY A, POLYPEPTIDE 13 (CYP72A13)"]
["AT2G45570","turquoise","member of CYP76C","CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 2 (CYP76C2)","CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 2 (CYP76C2)"]
["AT3G61040","turquoise","encodes a protein with cytochrome P450 domain","CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 7 (CYP76C7)","CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 7 (CYP76C7)"]
["AT5G09970","turquoise","Member of CYP78A family. Paralog of CYP78A5 and appears to function in a shoot meristem maintainence pathway with LAMP1 that parallels AMP1/CYP87A5.","CYTOCHROME P450, FAMILY 78, SUBFAMILY A, POLYPEPTIDE 7 (CYP78A7)","CYTOCHROME P450, FAMILY 78, SUBFAMILY A, POLYPEPTIDE 7 (CYP78A7)"]
["AT3G28740","turquoise","Encodes a member of the cytochrome p450 family. Expression is upregulated in response to cis-jasmonate treatment. Overexpression induces synthesis of volatile compounds that affect chemical ecology and insect interactions.","CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 11 (CYP81D11)","CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 11 (CYP81D11)"]
["AT4G37370","turquoise","member of CYP81D","CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 8 (CYP81D8)","CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 8 (CYP81D8)"]
["AT1G64940","turquoise","member of CYP89A","CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 6 (CYP89A6)","CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 6 (CYP89A6)"]
["AT1G64950","turquoise","member of CYP89A The mRNA is cell-to-cell mobile.","CYTOCHROME P450, FAMILY 89, SUBFAMILY A, POLYPEPTIDE 5 (CYP89A5)","CYTOCHROME P450, FAMILY 89, SUBFAMILY A, POLYPEPTIDE 5 (CYP89A5)"]
["AT3G56630","turquoise","member of CYP94D","CYTOCHROME P450, FAMILY 94, SUBFAMILY D, POLYPEPTIDE 2 (CYP94D2)","CYTOCHROME P450, FAMILY 94, SUBFAMILY D, POLYPEPTIDE 2 (CYP94D2)"]
["AT4G11140","turquoise","Encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. CRF proteins relocalize to the nucleus in response to cytokinin.","CYTOKININ RESPONSE FACTOR 1 (CRF1)","CYTOKININ RESPONSE FACTOR 1 (CRF1)"]
["AT1G15300","turquoise","transposable_element_gene;(source:Araport11);hAT-like transposase family (hobo/Ac/Tam3), has a 5.1e-59 P-value blast match to GB:CAA29005 ORFa of Maize Ac (hAT-element) (Zea mays);(source:TAIR10)","CYTOSLEEPER (CYTOSLEEPER)","CYTOSLEEPER (CYTOSLEEPER)"]
["AT1G78420","turquoise","Activates the latent peptidases DA1, DAR1 and DAR2 by mono-ubiquitination at multiple sites. Subsequently, these activated peptidases destabilize various positive regulators of growth.","DA (LARGE IN CHINESE) 2 (DA2)","DA (LARGE IN CHINESE) 2 (DA2)"]
["AT4G05420","turquoise","Structurally similar to damaged DNA binding proteins. DDB1a is part of a 350 KDa nuclear localized DET1 protein complex. This complex may physically interact with histone tails and while bound to chromatin- repress transcription of genes involved in photomorphogenesis. DDB1a is shown to be RUB-modified.","DAMAGED DNA BINDING PROTEIN 1A (DDB1A)","DAMAGED DNA BINDING PROTEIN 1A (DDB1A)"]
["AT3G60140","turquoise","Encodes a protein similar to beta-glucosidase and is a member of glycoside hydrolase family 1. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell. The mRNA is cell-to-cell mobile.","DARK INDUCIBLE 2 (DIN2)","DARK INDUCIBLE 2 (DIN2);SENESCENCE-RELATED GENE 2 (SRG2);BETA GLUCOSIDASE 30 (BGLU30)"]
["AT3G20550","turquoise","Encodes a nuclear localized FHA (forhkead) domain containing protein.Mutant plants have shortened roots, delayed flowering time, altered floral organ number, defective floral organs and reduced fertility.Ddl mutants also show reduced levels of pri-miRNAs as well as mature miRNAs suggesting involvement in biogenesis of miRNAs. DDL does not affect transcription of miRNAs directly but may act through other proteins such as DCL.","DAWDLE (DDL)","DAWDLE (DDL)"]
["AT3G51370","turquoise","Inhibits SALT OVERLY SENSITIVE 1 Na+/H+ antiporter activity under non-salt-stress conditions.","D-CLADE TYPE 2C PROTEIN PHOSPHATASE 6 (PP2C.D6)","D-CLADE TYPE 2C PROTEIN PHOSPHATASE 6 (PP2C.D6)"]
["AT2G15560","turquoise","NYN domain endoribonuclease which interacts with DCP1, an mRNA decapping complex member. Catatytic residues are required to repress the expression of mRNAs in planta upon transient expression.","DCP1-ASSOCIATED NYN ENDORIBONUCLEASE 1 (DNE1)","DCP1-ASSOCIATED NYN ENDORIBONUCLEASE 1 (DNE1)"]
["AT4G31160","turquoise","Encodes a DCAF/DWD protein capable of interacting with DDB1 and associating with CUL4, likely as part of a nuclear ubiquitin ligase complex. DCAF1 appears to be required for plant embryogenesis and to affect several other developmental processes including leaf, shoot, and flower development.","DDB1-CUL4 ASSOCIATED FACTOR 1 (DCAF1)","DDB1-CUL4 ASSOCIATED FACTOR 1 (DCAF1)"]
["AT3G09090","turquoise","Encodes DEX1 (defective in exine formation). Required for exine pattern formation during pollen development.","DEFECTIVE IN EXINE FORMATION 1 (DEX1)","DEFECTIVE IN EXINE FORMATION 1 (DEX1)"]
["AT1G13870","turquoise","Encodes a homolog of the yeast TOT4/KTI12 protein. Yeast TOT4/KTI12 associates with Elongator, a multisubunit complex that binds the RNA polymerase II transcription elongation complex. Ds insertion mutant has enlarged shoot apical region, 4 to 6 long slender leaves followed by spike-like structures, short roots. Mutants also have no ncm5U (5-carbamoylmethyluridine).","DEFORMED ROOTS AND LEAVES 1 (DRL1)","DEFORMED ROOTS AND LEAVES 1 (DRL1); (AtKTI12)"]
["AT4G32670","turquoise","Paralog of CER9(At4g34100), but DOA10B is part of a separate Brassicaceae- specific clade. While similar to yeast DOA10, it does not complement the yeast mutant and does not appear to function in NTA protein turnover but is required for DRY2/SQE1 degradation in planta.","DEGRADATION OF ALPHA2 10B (ATDOA10B)","DEGRADATION OF ALPHA2 10B (ATDOA10B)"]
["AT3G50980","turquoise","dehydrin xero 1;(source:Araport11)","DEHYDRIN XERO 1 (XERO1)","DEHYDRIN XERO 1 (XERO1)"]
["AT1G01970","turquoise","Involved in RNA editing via protein complexes. Encodes a dual-localized pentatricopeptide repeat protein required for chloroplast and mitochondrial development.","DELAYED GREENING409 (DG409)","DELAYED GREENING409 (DG409)"]
["AT1G48760","turquoise","Encodes the putative delta subunit of the AP(adaptor protein)-3 complex and plays a role in vacuolar function.","DELTA-ADAPTIN (delta-ADR)","DELTA-ADAPTIN (delta-ADR);PROTEIN-AFFECTED TRAFFICKING 4 (PAT4);ADAPTOR PROTEIN 3 DELTA (AP-3DELTA)"]
["AT1G72040","turquoise","Encodes a multisubstrate deoxyribonucleoside kinase that salvages DNA precursors.","DEOXYRIBONUCLEOSIDE KINASE (DNK)","DEOXYRIBONUCLEOSIDE KINASE (DNK); (ATDNK)"]
["AT1G58220","turquoise","Plays an essential role in organ development by regulating cell expansion either directly by affecting cell wall architecture and/or cytoplasmic growth or indirectly through the ethylene and/or ABA signaling pathways.DRMY1 is Involved in regulating floral organ development, especially ensuring organ size robustness (PMID:32451448).","DEVELOPMENT RELATED MYB-LIKE1 (DRMY1)","DEVELOPMENT RELATED MYB-LIKE1 (DRMY1)"]
["AT5G12290","turquoise","Encodes a mitochondrial outer membrane protein that is found in a complex with MIC60, TOM40, RISP and TOM20. Involved in galactoglycerolipid biosynthesis/lipid homeostasis. The dgd1 mutant phenotype is suppressed in the dgs1 mutant background.","DGD1 SUPPRESSOR 1 (DGS1)","DGD1 SUPPRESSOR 1 (DGS1)"]
["AT5G07920","turquoise","Encodes a putative diacylglycerol kinase that is mainly expressed in roots, shoots and leaves, but its enzyme product was not active in vitro.","DIACYLGLYCEROL KINASE1 (DGK1)","DIACYLGLYCEROL KINASE 1 (ATDGK1);DIACYLGLYCEROL KINASE1 (DGK1)"]
["AT5G64280","turquoise","dicarboxylate transporter 2.2;(source:Araport11)","DICARBOXYLATE TRANSPORTER 2.2 (DiT2.2)","DICARBOXYLATE TRANSPORTER 2.2 (DiT2.2)"]
["AT3G03300","turquoise","Encodes a Dicer-like protein that functions in the antiviral silencing response in turnip-crinkle virus-infected plants but not in TMV or CMV-strain-Y-infected plants. Involved in the production of ta-siRNAs. Partially antagonizes the production of miRNAs by DCL1. Substitutes for DCL4 to produce viral siRNA when DCL4 is missing or inhibited. Able to produce siRNAs but not miRNAs.","DICER-LIKE 2 (DCL2)","DICER-LIKE 2 (DCL2);DICER-LIKE 2 (ATDCL2)"]
["AT4G34740","turquoise","Encodes glutamine 5-phosphoribosylpyrophosphate amidotransferase. Mutants are deficient in leaf, but not cotyledon, plastid and palisade cell development. Mutants exhibit defective chloroplast development under non-low light, suggesting that the defect in chloroplast development is caused by photo-oxidative damage. Plays role in differential development of vascular-associated cells. Demonstrates a cell-specific difference in chloroplast development.Mutant leaves are highly reticulate with a green vascular pattern.","GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 2 (ASE2)","DIFFERENTIAL DEVELOPMENT OF VASCULAR ASSOCIATED CELLS (DOV1);GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 2 (ATASE2);CHLOROPLAST IMPORT APPARATUS 1 (CIA1); (ATPURF2);GLN PHOSPHORIBOSYL PYROPHOSPHATE AMIDOTRANSFERASE 2 (ASE2)"]
["AT3G60880","turquoise","Encodes a dihydropicolinate synthase involved in lysine biosynthesis. The enzyme is allosterically inhibited by lysine. It is predicted to localize to the cholorplast.","DIHYDRODIPICOLINATE SYNTHASE 1 (DHDPS1)","DIHYDRODIPICOLINATE SYNTHASE (DHDPS);DIHYDRODIPICOLINATE SYNTHASE 1 (DHDPS1)"]
["AT2G45440","turquoise","Encodes a protein that likely has dihydropicolinate synthase activity based on its mutant phenotype of decreased lysine levels and increased aspartate levels. The mutant also has increased levels of threonine. The enzyme is predicted to localize to the chloroplast.","DIHYDRODIPICOLINATE SYNTHASE 2 (DHDPS2)","DIHYDRODIPICOLINATE SYNTHASE 2 (DHDPS2)"]
["AT5G04760","turquoise","R-R-type MYB protein which plays negative roles in salt stress and is required for ABA signaling in Arabidopsis.","DIVARICATA2 (DIV2)","DIVARICATA2 (DIV2)"]
["AT3G14990","turquoise","Encodes a homolog of animal DJ-1 superfamily protein. In the A. thaliana genome, three genes encoding close homologs of human DJ-1 were identified AT3G14990 (DJ1A), AT1G53280 (DJ1B) and AT4G34020 (DJ1C). Among the three homologs, DJ1C is essential for chloroplast development and viability. It exhibits glyoxalase activity towards glyoxal and methylglyoxal. The mRNA is cell-to-cell mobile.","DJ-1 HOMOLOG A (DJ1A)","DJ-1 HOMOLOG A (DJ1A);DJ-1 HOMOLOG A (AtDJ1A); (DJ-1A)"]
["AT4G02110","turquoise","Encodes a multi-BRCT domain protein that promotes the recruitment of RAD51 to DNA damage sites to facilitate homologous recombination.","BRCT5 DOMAIN CONTAINING PROTEIN 1 (BCP1)","DNA DAMAGE RESPONSE MUTANT 2 (DDRM2);BRCT5 DOMAIN CONTAINING PROTEIN 1 (BCP1)"]
["AT2G20560","turquoise","DNAJ heat shock family protein;(source:Araport11)","DNAJ PROTEIN (DNAJ)","DNAJ PROTEIN (DNAJ)"]
["AT4G36040","turquoise","DNA J protein.","DNAJ11 (J11)","DNAJ11 (J11);DNA J PROTEIN C23 (DJC23)"]
["AT4G13830","turquoise","DnaJ-like protein (J20); nuclear gene. Targeting of proteins for degradation.","DNAJ-LIKE 20 (J20)","DNAJ-LIKE 20 (J20);DNA J PROTEIN C26 (DJC26)"]
["AT3G50410","turquoise","Arabidopsis Dof protein containing a single 51-amino acid zinc finger DNA-binding domain, which may play an important roles in plant growth and development.","OBF BINDING PROTEIN 1 (OBP1)","DOF PROTEIN 3.4 (DOF3.4);OBF BINDING PROTEIN 1 (OBP1)"]
["AT1G10390","turquoise","DRA2 is a homolog of mammalian nucleoporin 98 and a likely component of the nuclear pore complex in Arabidopsis. It positively participates in the control of the hypocotyl elongation response to plant proximity and control of shade induced gene expression. Nucleoportin which redundantly inhibits flowering together with Nup98b through multiple pathways including clock, photoperiod, and age pathways. Gates flowering in a CONSTANS (CO)-independent mode and bypasses the CO checkpoint in photoperiodic signaling and integrated signals from multiple pathways to directly target FLOWERING LOCUS T (FT) for flowering control.","DRACULA2 (DRA2)","DRACULA2 (DRA2); (NUP98A)"]
["AT3G11020","turquoise","encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2B). The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A.","DRE/CRT-BINDING PROTEIN 2B (DREB2B)","DRE/CRT-BINDING PROTEIN 2B (DREB2B);DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2 (DREB2)"]
["AT5G67190","turquoise","encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.","DREB AND EAR MOTIF PROTEIN 2 (DEAR2)","DREB AND EAR MOTIF PROTEIN 2 (DEAR2)"]
["AT2G23340","turquoise","encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.","DREB AND EAR MOTIF PROTEIN 3 (DEAR3)","DREB AND EAR MOTIF PROTEIN 3 (DEAR3)"]
["AT1G08410","turquoise","Encodes a large 60S subunit nuclear export GTPase 1 that is required for 40S maturation and is involved in ribosome biogenesis and affects multiple auxin-regulated development processes.","YEAST LSG1 ORTHOLOGUE 2 (LSG1-2)","DROUGHT INHIBITED GROWTH OF LATERAL ROOTS 6 (DIG6);YEAST LSG1 ORTHOLOGUE 2 (LSG1-2)"]
["AT1G80710","turquoise","Encodes a WD-40 repeat family protein containing a DWD (DDB1 binding WD-40) motif. Mutant analysis demonstrates that DRS1 promotes tolerance to drought stress, possibly mediated by ABA, and suggests involvement of DDB1- Cul4?mediated protein degradation in drought response.","DROUGHT SENSITIVE 1 (DRS1)","DROUGHT SENSITIVE 1 (DRS1)"]
["AT5G55970","turquoise","Drought-induced gene encoding an ER-localized RING-type E3 Ub ligase.","DROUGHT-RESPONSIVE RING PROTEIN 1 (DDR1)","DROUGHT-RESPONSIVE RING PROTEIN 1 (DDR1)"]
["AT2G19430","turquoise","This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and DDB1b in co-IP assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase. Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis.","DWD (DDB1-BINDING WD40 PROTEIN) HYPERSENSITIVE TO ABA 1 (DWA1)","DWD (DDB1-BINDING WD40 PROTEIN) HYPERSENSITIVE TO ABA 1 (DWA1); (THO6); (AtTHO6)"]
["AT4G34280","turquoise","Encodes a putative substrate receptor for the cullin4-RING ubiquitin E3 ligase complex that is involved in negative regulation of plant UV-B response.","DWD HYPERSENSITIVE TO UV-B 1 (DHU1)","DWD HYPERSENSITIVE TO UV-B 1 (DHU1)"]
["AT4G17620","turquoise","NAD-RNA decapping enzyme.Mediates the connection between RNA turnover and retrograde chloroplast-to-nucleus signaling. Catalyzes the hydrolysis of RNAs bearing a 5 -hydroxyl group (5-OH RNA).","DXO PROTEIN 1 (DXO1)","DXO PROTEIN 1 (DXO1)"]
["AT3G60190","turquoise","At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central `dynamin 2` domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection.","DYNAMIN-LIKE 1E (DL1E)","DYNAMIN-LIKE 1E (DL1E);ARABIDOPSIS DYNAMIN-LIKE 4 (ADL4);ENHANCED DISEASE RESISTANCE 3 (EDR3);DYNAMIN-LIKE PROTEIN 2 (ADLP2);DYNAMIN-RELATED PROTEIN 1E (DRP1E);DYNAMIN-LIKE 1E (ADL1E)"]
["AT1G59610","turquoise","A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis. The mRNA is cell-to-cell mobile.","DYNAMIN-LIKE 3 (DL3)","DYNAMIN-LIKE 3 (ADL3);DYNAMIN-LIKE 3 (DL3);DYNAMIN RELATED PROTEIN 2B (DRP2B)"]
["AT5G22220","turquoise","Member of the E2F transcription factors, (cell cycle genes), key components of the cyclin D/retinoblastoma/E2F pathway. Binds DPA and RBR1 proteins. Expressed throughout the cell cycle. Abundance increased by auxin through stabilization of the protein. Elevates CDK levels and activity, even under hormone-free conditions. Promotes cell division and shortens cell doubling time, inhibits cell growth. Transgenic plants overexpressing AtE2Fa contained an increased level of AtE2Fb transcripts that is paralleled by an increase in the amount of the AtE2Fb protein, suggesting that AtE2Fb expression might actually be up-regulated by the AtE2Fa transcription factor. Required for DNA damage-induced cell cycle arrest.","E2F TRANSCRIPTION FACTOR 1 (E2F1)","E2F TRANSCRIPTION FACTOR 1 (E2F1); (ATE2FB); (E2FB)"]
["AT3G58110","turquoise","Encodes an adaptor protein that connects JAZ repressors with the TPR2 co-repressor to suppress jasmonate-responsive anthocyanin accumulation.","EAR MOTIF-CONTAINING ADAPTOR PROTEIN (ECAP)","EAR MOTIF-CONTAINING ADAPTOR PROTEIN (ECAP)"]
["AT5G04240","turquoise","Early Flowering 6 (ELF6) encodes a Jumonji N/C and zinc finger domain-containing protein that acts as a repressor in the photoperiod pathway. ELF6 interacts with BES1 in a Y2H assay, in vitro, and in Arabidosis protoplasts (based on BiFC). ELF6 may play a role in brassinosteroid signaling by affecting histone methylation in the promoters of BR-responsive genes.","EARLY FLOWERING 6 (ELF6)","EARLY FLOWERING 6 (ELF6)"]
["AT2G06210","turquoise","Encodes a yeast CTR9 homolog that is involved in the control of flowering time by elevating FLC expression to a level that creates the vernalization-responsive, winter-annual habit. Yeast CTR9 is a component of a five-member PAF1 complex that associates with RNA pol II and is thought to regulate gene expression by recruiting SET1 (a histone 3 Lys 4 [H3-K4] methyl transferase) to the initially transcribed [5'] regions of target chromatin. Mutants display reduced H3-K4 methylation in both FLC and FLM chromatin. Member of PAF-C complex.","EARLY FLOWERING 8 (ELF8)","EARLY FLOWERING 8 (ELF8);VERNALIZATION INDEPENDENCE 6 (VIP6);NON-RESPONSE TO FE-DEFICIENCY2 (NRF2)"]
["AT1G77300","turquoise","Encodes a protein with histone lysine N-methyltransferase activity required specifically for the trimethylation of H3-K4 in FLC chromatin (and not in H3-K36 dimethylation). Acts as an inhibitor of flowering specifically involved in the autonomous promotion pathway. EFS also regulates the expression of genes involved in carotenoid biosynthesis and nitrogen assimilation.Modification of histone methylation at the CRTISO locus reduces transcript levels 90%. The increased shoot branching seen in some EFS mutants is likely due to the carotenoid biosynthesis defect having an effect on stringolactones.Required for ovule, embryo sac, anther and pollen development.","EARLY FLOWERING IN SHORT DAYS (EFS)","EARLY FLOWERING IN SHORT DAYS (EFS);SET DOMAIN GROUP 8 (SDG8);CAROTENOID CHLOROPLAST REGULATORY1 (CCR1); (CLI186);ASH1 HOMOLOG 2 (ASHH2);LAZARUS 2 (LAZ2);CARBON AND LIGHT INSENSITIVE 186 (CLI186)"]
["AT2G40170","turquoise","Encodes a group 1 LEA gene that is activated by direct binding of ABI5 to its promoter and is involved in response to ABA. Is required for normal seed development. Involved in regulating the timing of desiccation tolerance and rate of water loss during seed maturation.","LATE EMBRYOGENESIS ABUNDANT 6 (GEA6)","EARLY METHIONINE-LABELLED 6 (EM6);LATE EMBRYOGENESIS ABUNDANT 6 (GEA6);ARABIDOPSIS EARLY METHIONINE-LABELLED 6 (ATEM6)"]
["AT1G42430","turquoise","Novel plant specific, chloroplast localized protein that is involved in regulation of starch degradation.","EARLY STARVATION 1 (ESV1)","EARLY STARVATION 1 (ESV1)"]
["AT5G20480","turquoise","Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.","EF-TU RECEPTOR (EFR)","EF-TU RECEPTOR (EFR)"]
["AT5G09990","turquoise","elicitor peptide 5 precursor;(source:Araport11)","ELICITOR PEPTIDE 5 PRECURSOR (PROPEP5)","ELICITOR PEPTIDE 5 PRECURSOR (PROPEP5)"]
["AT5G13680","turquoise","A subunit of Elongator, a histone acetyl transferase complex, consisting of six subunits (ELP1?ELP6), that copurifies with the elongating RNAPII in yeast and humans. Three Arabidopsis thaliana genes, encoding homologs of the yeast Elongator subunits ELP1, ELP3 (histone acetyl transferase), and ELP4 are responsible for the narrow leaf phenotype in elongata mutants and for reduced root growth that results from a decreased cell division rate. Mutants have no ncm5U (5-carbamoylmethyluridine).","ABA-OVERLY SENSITIVE 1 (ABO1)","ELONGATA 2 (ELO2); (AtELP1);ABA-OVERLY SENSITIVE 1 (ABO1)"]
["AT5G22350","turquoise","fission ELM1-like protein (DUF1022);(source:Araport11)","ELONGATED MITOCHONDRIA 1 (ELM1)","ELONGATED MITOCHONDRIA 1 (ELM1)"]
["AT2G18410","turquoise","elongator complex protein;(source:Araport11)","ELONGATOR COMPLEX PROTEIN 5 (ELP5)","ELONGATOR COMPLEX PROTEIN 5 (ELP5)"]
["AT4G20090","turquoise","Encodes an essential RNA-binding PPR factor required for nad1 maturation and complex I biogenesis.","EMBRYO DEFECTIVE 1025 (EMB1025)","EMBRYO DEFECTIVE 1025 (EMB1025);MITOCHONDRIA STABILITY/PROCESSING PPR FACTOR1 (MSP1)"]
["AT2G45330","turquoise","RNA 2-phosphotransferase, Tpt1 / KptA family;(source:Araport11)","EMBRYO DEFECTIVE 1067 (emb1067)","EMBRYO DEFECTIVE 1067 (emb1067);2' TRNA PHOSPHOTRANSFERASE (TRPT)"]
["AT1G60170","turquoise","Encodes a splicing factor PRP31. Involved in transcriptional gene silencing and stress responses.","(PRP31)","EMBRYO DEFECTIVE 1220 (emb1220); (PRP31)"]
["AT2G26060","turquoise","Encodes a homolog of the yeast Cytosolic Iron-sulfur protein Assembly protein CIA1.","EMBRYO DEFECTIVE 1345 (emb1345)","EMBRYO DEFECTIVE 1345 (emb1345);CYTOSOLIC IRON-SULFUR PROTEIN ASSEMBLY 1 (CIA1)"]
["AT3G01610","turquoise","AAA-type ATPase - Over 90% homologous to CDC48a","EMBRYO DEFECTIVE 1354 (emb1354)","EMBRYO DEFECTIVE 1354 (emb1354)"]
["AT4G24270","turquoise","A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. Splicing-related protein, promotes miRNA biogenesis.","EMBRYO DEFECTIVE 140 (EMB140)","EMBRYO DEFECTIVE 140 (EMB140); (SEAP1)"]
["AT5G49930","turquoise","zinc knuckle (CCHC-type) family protein;(source:Araport11)","EMBRYO DEFECTIVE 1441 (emb1441)","EMBRYO DEFECTIVE 1441 (emb1441)"]
["AT2G34780","turquoise","Encodes a novel protein of unknown function that is essential for embryonic development. Severe loss of function alleles are embryo lethal. Analysis of a partial loss of function allele indicates a role for EMB1611 in regulation of endoreduplication and maintenance of meristem cell fate. It appears to be required for maintaining the CLV-WUS regulatory pathway.","MATERNAL EFFECT EMBRYO ARREST 22 (MEE22)","EMBRYO DEFECTIVE 1611 (EMB1611);MATERNAL EFFECT EMBRYO ARREST 22 (MEE22); (UMB)"]
["AT5G03800","turquoise","Encodes a protein with a large central domain of 14 internal pentatricopeptide motifs (some degenerate) arranged in tandem. Mutations in this locus result in embryo lethality.","EMBRYO DEFECTIVE 175 (EMB175)","EMBRYO DEFECTIVE 166 (EMB166);EMBRYO DEFECTIVE 1899 (emb1899);EMBRYO DEFECTIVE 175 (EMB175)"]
["AT4G09980","turquoise","Encodes a member of a core set of mRNA m6A writer proteins and is required for N6-adenosine methylation of mRNA.","EMBRYO DEFECTIVE 1691 (EMB1691)","EMBRYO DEFECTIVE 1691 (EMB1691);METHYLTRANSFERASE B (MTB)"]
["AT5G56930","turquoise","CCCH-type zinc finger family protein;(source:Araport11)","EMBRYO DEFECTIVE 1789 (emb1789)","EMBRYO DEFECTIVE 1789 (emb1789); (ATC3H65)"]
["AT4G20060","turquoise","ARM repeat superfamily protein;(source:Araport11)","EMBRYO DEFECTIVE 1895 (EMB1895)","EMBRYO DEFECTIVE 1895 (EMB1895);DEFECTIVE IN SNRNA PROCESSING 1 (DSP1)"]
["AT3G54350","turquoise","Forkhead-associated (FHA) domain-containing protein;(source:Araport11)","EMBRYO DEFECTIVE 1967 (emb1967)","EMBRYO DEFECTIVE 1967 (emb1967)"]
["AT3G05680","turquoise","Encodes a splicing/methylation factor that is a homologue to the mammalian VIRILIZER, is member of a core set of mRNA m6A writer proteins and is required for N6-adenosine methylation of mRNA. Analysis of transcriptional profiles of the vir-1 mutant suggests that VIR is likely involved in regulation of gene expression, but the function of VIR is rather general than specific and knock-down of VIR does not affect overall splicing rates.","EMBRYO DEFECTIVE 2016 (EMB2016)","EMBRYO DEFECTIVE 2016 (EMB2016);VIRILIZER (VIR)"]
["AT1G79490","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)","EMBRYO DEFECTIVE 2217 (EMB2217)","EMBRYO DEFECTIVE 2217 (EMB2217)"]
["AT2G31530","turquoise","Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality.","SECY HOMOLOG 2 (SCY2)","EMBRYO DEFECTIVE 2289 (EMB2289);SECY HOMOLOG 2 (SCY2)"]
["AT2G18510","turquoise","Essential gene (embryo lethal) that is similar to component of splicosome. Regulates embryonic pattern formation through Pol II-Mediated transcription of WOX2 an PIN7 (DOI:10.1016/j.isci.2019.09.004). JANUS positively regulates PLT1 expression in the root meristem by recruiting RNA polymerase II (Pol II) to PLT1 and by interacting with PLT1. Nuclear accumulation of JANUS in root meristem depends on IMB4. (DOI:10.1105/tpc.20.00108 )","EMBRYO DEFECTIVE 2444 (emb2444)","EMBRYO DEFECTIVE 2444 (emb2444); (JANUS)"]
["AT4G13750","turquoise","Encodes NO VEIN (NOV), a plant-specific nuclear factor required for leaf vascular development, cellular patterning and stem cell maintenance in the root meristem, as well as for cotyledon outgrowth and separation. nov mutations affect many aspects of auxin-dependent development without directly affecting auxin perception.","NO VEIN (NOV)","EMBRYO DEFECTIVE 2597 (EMB2597);NO VEIN (NOV)"]
["AT4G29860","turquoise","Encodes a WD repeat protein with seven WD repeat motifs, predicted to function in protein-protein interaction. Mutations caused defects in both embryo and seedling development.","EMBRYO DEFECTIVE 2757 (EMB2757)","EMBRYO DEFECTIVE 2757 (EMB2757);TANMEI (TAN);ALUMINUM TOLERANT 2 (ALT2);DECREASED SIZE EXCLUSION LIMIT 1 (DSE1); (ATDSE1)"]
["AT5G63050","turquoise","embryo defective 2759;(source:Araport11)","EMBRYO DEFECTIVE 2759 (EMB2759)","EMBRYO DEFECTIVE 2759 (EMB2759)"]
["AT2G17510","turquoise","ribonuclease II family protein;(source:Araport11)","EMBRYO DEFECTIVE 2763 (EMB2763)","EMBRYO DEFECTIVE 2763 (EMB2763);RRP44 HOMOLOG A (RRP44A); (ATRRP44A)"]
["AT5G15540","turquoise","Encodes Adherin SCC2. Essential for viability. Required for normal seed development. Plays a role in the establishment of sister-chromatid cohesion and chromosome organization during meiosis.","EMBRYO DEFECTIVE 2773 (EMB2773)","EMBRYO DEFECTIVE 2773 (EMB2773);SISTER-CHROMATID COHESION 2 (SCC2);ARABIDOPSIS THALIANA SISTER-CHROMATID COHESION 2 (ATSCC2)"]
["AT1G24706","turquoise","Encodes a component of the putative Arabidopsis THO/TREX complex: THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis. Mutations in THO have severe developmental defects and affect the production of several different classes of small RNAs indicating a broader role in small RNA biosynthesis.","(THO2)","EMBRYO DEFECTIVE 2793 (EMB2793); (THO2)"]
["AT1G77470","turquoise","Encodes a protein with high homology to the Replication Factor C, Subunit 3 (RFC3) of yeast and other eukaryotes. rfc3 mutants are hypersensitive to salicylic acid and exhibit enhanced induction of PR genes and resistance against virulent oomycete Hyaloperonospora arabidopsidis Noco2. The enhanced pathogen resistance in the mutant is NPR1-independent.","REPLICATION FACTOR C SUBUNIT 3 (RFC3)","EMBRYO DEFECTIVE 2810 (EMB2810);REPLICATION FACTOR C SUBUNIT 3 (RFC3);REPLICATION FACTOR C 5 (RFC5)"]
["AT1G08910","turquoise","Encodes an SP-RING domain containing protein that functions in sumolaytion and is involved in positive regulation of sulfur metabolism and stress response.","PROTEIN INHIBITOR OF ACTIVATED STAT LIKE 1 (PIAL1)","EMBRYO DEFECTIVE 3001 (EMB3001);PROTEIN INHIBITOR OF ACTIVATED STAT LIKE 1 (PIAL1)"]
["AT4G20740","turquoise","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)","EMBRYO DEFECTIVE 3131 (EMB3131)","EMBRYO DEFECTIVE 3131 (EMB3131)"]
["AT2G01730","turquoise","a homolog of cleavage and polyadenylation specificity factor that plays an essential role in the development of female gametophyte and embryo","CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 73 KDA SUBUNIT-II (CPSF73-II)","EMBRYO SAC DEVELOPMENT ARREST 26 (EDA26);CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 73 KDA SUBUNIT-II (ATCPSF73-II);CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 73 KDA SUBUNIT-II (CPSF73-II)"]
["AT3G56990","turquoise","embryo sac development arrest 7;(source:Araport11)","EMBRYO SAC DEVELOPMENT ARREST 7 (EDA7)","EMBRYO SAC DEVELOPMENT ARREST 7 (EDA7)"]
["AT3G12140","turquoise","Agenet domain containing nucleosome binding protein. Binds H3K36 sites.","EMSY-LIKE 1 (EML1)","EMSY-LIKE 1 (EML1); (AtEML1)"]
["AT3G09060","turquoise","Pentatricopeptide repeat (PPR) protein essential for the production and the stabilization of the mature form of the nad2 exons 1?2 precursor transcript, whose 3&#8242; end corresponds to the 5&#8242; half of the nad2 trans-intron 2.","ENDONUCLEOLYTIC MITOCHONDRIAL STABILITY FACTOR 1 (EMS1)","ENDONUCLEOLYTIC MITOCHONDRIAL STABILITY FACTOR 1 (EMS1)"]
["AT3G60260","turquoise","Acts upstream of aperture proteins, their expression levels influence the number of aperture domains that form on the surface of developing pollen grains.","ENGULFMENT AND CELL MOTILITY (ELMO) DOMAIN A (ELMOD_A)","ENGULFMENT AND CELL MOTILITY (ELMO) DOMAIN A (ELMOD_A)"]
["AT4G39030","turquoise","Encodes an orphan multidrug and toxin extrusion transporter. Essential component of salicylic acid-dependent signaling for disease resistance. Member of the MATE-transporter family. Expression induced by salicylic acid. Mutants are salicylic acid-deficient.","ENHANCED DISEASE SUSCEPTIBILITY 5 (EDS5)","ENHANCED DISEASE SUSCEPTIBILITY 5 (EDS5);SALICYLIC ACID INDUCTION DEFICIENT 1 (SID1);SUSCEPTIBLE TO CORONATINE-DEFICIENT PST DC3000 3 (SCORD3)"]
["AT2G19560","turquoise","encodes a protein with a PAM domain involved in ethylene signaling. eer5 mutants show ethylene hypersensitivity in relation to hypocotyl elongation. EER5 interacts with EIN2 and with COP9 in Y2H assays. EIN3 protein levels are the same in WT and eer5-1 mutants. EER5 may be involved in promoting a dampening of the ethylene response.","ENHANCED ETHYLENE RESPONSE 5 (EER5)","ENHANCED ETHYLENE RESPONSE 5 (EER5);ECTOPIC EXPRESSION OF SEED STORAGE PROTEINS 1 (ESSP1); (AtTHP1); (THP1)"]
["AT1G11300","turquoise","The annotation for At1g11300 in TAIR10 is incorrect. This locus has been split into two At1g11300 (symbol: EGM1) and At1g11305 (symbol: EGM2) (Olivier Loudet, personal communication, 2013-04-03). See Comment field for revised annotation.","ENHANCED SHOOT GROWTH UNDER MANNITOL STRESS 1 (EGM1)","ENHANCED SHOOT GROWTH UNDER MANNITOL STRESS 1 (EGM1)"]
["AT1G73840","turquoise","Resembles the CstF64 family of RNA processing factors that are conserved between yeast and mammals. In mammals, CstF64 is a component of the CstF complex which is required for mRNA 3'end formation along with other factors.","ENHANCED SILENCING PHENOTYPE 1 (ESP1)","ENHANCED SILENCING PHENOTYPE 1 (ESP1)"]
["AT5G01400","turquoise","Encodes a Symplekin/Pta1 homologue which would have the potential to interact with either ESP1 or AtCstF64.","ENHANCED SILENCING PHENOTYPE 4 (ESP4)","ENHANCED SILENCING PHENOTYPE 4 (ESP4)"]
["AT3G17668","turquoise","DnaJ/Hsp40 cysteine-rich domain superfamily protein;(source:Araport11)","ENHANCER OF ATNSI ACTIVITY (ENA)","ENHANCER OF ATNSI ACTIVITY (ENA)"]
["AT1G79020","turquoise","Scaffold protein of Nucleosomal acetyltransferase of H4 (NuA4), which is an essential transcriptional coactivator in eukaryotes. Necessary for nucleosomal acetylation of histones H4 and H2A.Z by NuA4 in vitro.","ENHANCER OF POLYCOMB-LIKE 1 B (EPL1B)","ENHANCER OF POLYCOMB-LIKE 1 B (EPL1B)"]
["AT5G66730","turquoise","C2H2-like zinc finger protein;(source:Araport11)","INDETERMINATE DOMAIN 1 (IDD1)","ENHYDROUS (ENY);INDETERMINATE DOMAIN 1 (IDD1)"]
["AT2G13540","turquoise","Encodes a nuclear cap-binding protein that forms a heterodimeric complex with CBP20 and is involved in ABA signaling and flowering. Mutants are early flowering and exhibit hypersensitive response to ABA in germination inhibition.Loss of ABH1 function results in abnormal processing of mRNAs for several important floral regulators (FLC, CO, FLM). Analysis of loss of function mutations suggests a role in pri-miRNA processing and mRNA splicing. Note that two different mutant alleles were given the same name abh1-7 (Kuhn et al 2007; Kim et al 2008). To avoid confusion, abh1-7 described in Kim et al (2008) has been renamed abh1-107 (other names: ensalada-1, ens-1).","ABA HYPERSENSITIVE 1 (ABH1)","ENSALADA (ENS);ABA HYPERSENSITIVE 1 (ABH1);CAP-BINDING PROTEIN 80 (CBP80); (ATCBP80)"]
["AT1G75220","turquoise","Encodes a vacuolar glucose exporter that is induced in response to factors that activate vacuolar glucose pools like darkness, heat stress and wounding and repressed during conditions that trigger glucose accumulation in the vacuole like cold stress and external sugar supply.","ERD6-LIKE 6 (ERDL6)","ERD6-LIKE 6 (ERDL6); (ATERDL6)"]
["AT1G28360","turquoise","encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ERF12). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. Regulates floral development.","ERF DOMAIN PROTEIN 12 (ERF12)","ERF DOMAIN PROTEIN 12 (ERF12);ERF DOMAIN PROTEIN 12 (ATERF12);ETHYLENE RESPONSE FACTOR12 (ERF12)"]
["AT1G49880","turquoise","Encodes Erv1, a component of the mitochondrial intermembrane space assembly machinery involved in the import pathway of the small intermembrane space proteins. It contains a Cys-X-Cys shuttle disulfide and oxidizes thioredoxin in vitro. Flavoenzyme-encoding gene.","ERV1 (Erv1)","ERV1 (Erv1);EMBRYO DEFECTIVE 3106 (EMB3106); (AtErv1)"]
["AT4G17500","turquoise","Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. The mRNA is cell-to-cell mobile.","ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 (ERF-1)","ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 (ATERF-1);ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 (ERF-1); (ERF1A); (ATERF#100); (ERF100)"]
["AT3G20770","turquoise","Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses. EIN3 interacts with MYC2, MYC3 and MYC4 to inhibit jasmonate-induced expression of wound-responsive genes and herbivory-inducible genes, and plant defense against generalist herbivores.","ETHYLENE-INSENSITIVE3 (EIN3)","ETHYLENE-INSENSITIVE3 (EIN3); (AtEIN3)"]
["AT5G20920","turquoise","protein synthesis initiation factor eIF2 beta","EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT (EIF2 BETA)","EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT (EIF2 BETA);EUKARYOTIC TRANSLATION INITIATION FACTOR 2 BETA SUBUNIT (EIF-2BS);EMBRYO DEFECTIVE 1401 (EMB1401)"]
["AT3G26400","turquoise","member of eIF4B - eukaryotic initiation factor 4B The mRNA is cell-to-cell mobile.","EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 (EIF4B1)","EUKARYOTIC TRANSLATION INITIATION FACTOR 4B1 (EIF4B1)"]
["AT1G09810","turquoise","evolutionarily conserved C-terminal region 11;(source:Araport11)","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 11 (ECT11)","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 11 (ECT11)"]
["AT1G55500","turquoise","YTHDF protein which togeteher with ECT2 and ECT3 is involved in cell proliferation during plant organogenesis.","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 4 (ECT4)","EVOLUTIONARILY CONSERVED C-TERMINAL REGION 4 (ECT4)"]
["AT5G49830","turquoise","Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion.","EXOCYST COMPLEX COMPONENT 84B (EXO84B)","EXOCYST COMPLEX COMPONENT 84B (EXO84B)"]
["AT4G02350","turquoise","Encodes a member of the exocyst complex gene family. The exocyst is a protein complex involved in tethering vesicles to the plasma membrane during regulated or polarized secretion. The mRNA is cell-to-cell mobile.","EXOCYST COMPLEX COMPONENT SEC15B (SEC15B)","EXOCYST COMPLEX COMPONENT SEC15B (SEC15B)"]
["AT5G03540","turquoise","AtEXO70A1 is a member of EXO70 gene family, putative exocyst subunits, conserved in land plants. It plays a central role in Casparian strip formation, generating a transient positional information that will be translated into a precisely localized cell wall modification.","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN A1 (EXO70A1)","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN A1 (EXO70A1);EXOCYST SUBUNIT EXO70 FAMILY PROTEIN A1 (ATEXO70A1)"]
["AT3G14090","turquoise","A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN D3 (EXO70D3)","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN D3 (EXO70D3);EXOCYST SUBUNIT EXO70 FAMILY PROTEIN D3 (ATEXO70D3)"]
["AT5G50380","turquoise","A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN F1 (EXO70F1)","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN F1 (EXO70F1);EXOCYST SUBUNIT EXO70 FAMILY PROTEIN F1 (ATEXO70F1)"]
["AT4G31540","turquoise","A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN G1 (EXO70G1)","EXOCYST SUBUNIT EXO70 FAMILY PROTEIN G1 (ATEXO70G1);EXOCYST SUBUNIT EXO70 FAMILY PROTEIN G1 (EXO70G1)"]
["AT5G17020","turquoise","Encodes a member of the exportin protein family (XPO1A) which functions as receptors for nuclear export. Binds to a variety of proteins having leucine rich export signals.Along with XPO1B involved with development of the male and female gametophytes. Sensitive to heat and oxidative stress.","EXPORTIN 1A (XPO1A)","EXPORTIN 1A (XPO1A); (ATCRM1);HEAT-INTOLERANT 2 (HIT2);EXPORTIN 1 (XPO1);ARABIDOPSIS THALIANA EXPORTIN 1 (ATXPO1)"]
["AT3G03110","turquoise","Encodes a member of the exportin family (XPO1B)which function as receptors for nuclear transport.Along with XPO1A involved in the development of male and female gametophytes.","EXPORTIN 1B (XPO1B)","EXPORTIN 1B (XPO1B); (CRM1B)"]
["AT4G26750","turquoise","Encodes a protein involved in mediating plant responses to pathogenesis. Loss of function mutations have increased susceptibility to bacterial pathogens and are defective in pathogen induced endocytosis and vesicle trafficking. LIP5 physically interacts with SKD1 and that interaction is required for its resistance phenotype. LIP5 is phosphorylated by MPK3 and MPK6, both of which are components of the disease resistance pathway.","EXTENSIN-LIKE (EXT-like)","EXTENSIN-LIKE (EXT-like);HOMOLOG OF MAMMALIAN LYST-INTERACTING PROTEIN5 (LIP5)"]
["AT4G14970","turquoise","Encodes a protein that is required for meiotic homologous recombination and acts in parallel to both MUTS HOMOLOG 4 (AtMSH4), known for its role in promoting interfering cross-overs (COs) and MMS AND UV SENSITIVE 81 (AtMUS81), known for its role in the formation of non-interfering COs.","FANCONI ANEMIA D2 (ATFANCD2)","FANCONI ANEMIA D2 (ATFANCD2);FANCONI ANEMIA D2 (FACND2)"]
["AT2G27110","turquoise","FAR1-related sequence 3;(source:Araport11)","FAR1-RELATED SEQUENCE 3 (FRS3)","FAR1-RELATED SEQUENCE 3 (FRS3)"]
["AT4G38180","turquoise","FAR1-related sequence 5;(source:Araport11)","FAR1-RELATED SEQUENCE 5 (FRS5)","FAR1-RELATED SEQUENCE 5 (FRS5)"]
["AT1G52520","turquoise","FAR1-related sequence 6;(source:Araport11)","FAR1-RELATED SEQUENCE 6 (FRS6)","FAR1-RELATED SEQUENCE 6 (FRS6)"]
["AT1G80010","turquoise","FAR1-related sequence 8;(source:Araport11)","FAR1-RELATED SEQUENCE 8 (FRS8)","FAR1-RELATED SEQUENCE 8 (FRS8)"]
["AT4G38170","turquoise","FAR1-related sequence 9;(source:Araport11)","FAR1-RELATED SEQUENCE 9 (FRS9)","FAR1-RELATED SEQUENCE 9 (FRS9)"]
["AT3G07500","turquoise","Encodes one of four FRS (FAR1-RELATED SEQUENCE) factor-like genes in Arabidopsis. FRS factors are characterized by having an N-terminal C2H2-type chelating motif of the WRKY- Glial Cell Missing1 family, a central core transposase domain of Mutator-like element transposases, and a C-terminal SWIM domain. The four FRF-like genes in Arabidopsis share only the N-terminal motif with FRS proteins.","FAR1-RELATED SEQUENCES-RELATED FACTOR2 (FRF2)","FAR1-RELATED SEQUENCES-RELATED FACTOR2 (FRF2)"]
["AT3G22170","turquoise","A component of the PHYA signaling network, mediates the FR-HIR response to far-red light in concert with FAR1. Expression is induced by age; involved in negative regulation of leaf senescence.","FAR-RED ELONGATED HYPOCOTYLS 3 (fhy3)","FAR-RED ELONGATED HYPOCOTYLS 3 (fhy3);CHLOROPLAST DIVISION MUTANT 45 (CPD45)"]
["AT4G15090","turquoise","Encodes a nuclear localized protein involved in far red light response signaling. Loss of function mutants are defective in far red light responses. For example:prevents leaf senescence under high ratio of red/far-red light conditions.Interacts with homologous gene FHY3.","FAR-RED IMPAIRED RESPONSE 1 (FAR1)","FAR-RED IMPAIRED RESPONSE 1 (FAR1)"]
["AT3G16740","turquoise","Encodes an F-box protein highly expressed in siliques that is involved in regulating seed germination.","F-BOX OVEREXPRESSED/OPPRESSED ABA SIGNALING 2 (FOA2)","F-BOX OVEREXPRESSED/OPPRESSED ABA SIGNALING 2 (FOA2)"]
["AT1G21760","turquoise","This gene is predicted to encode an F-box protein that is evolutionarily conserved between Arabidopsis and other eukaryotes including S.cerevisiae and humans. It may play a role in regulating translation under conditions of temperature stress. FBP7 transcript levels are increased at high and low temperatures. The mRNA is cell-to-cell mobile.","F-BOX PROTEIN 7 (FBP7)","F-BOX PROTEIN 7 (FBP7);F-BOX PROTEIN 7 (ATFBP7)"]
["AT2G27510","turquoise","ferredoxin 3;(source:Araport11)","FERREDOXIN 3 (FD3)","FERREDOXIN 3 (ATFD3);FERREDOXIN 3 (FD3)"]
["AT1G32550","turquoise","Encodes FdC2, a ferredoxin protein capable of alternative electron partitioning. FdC1 level increases in conditions of acceptor limitation at PSI.","FERREDOXIN C 2 (FdC2)","FERREDOXIN C 2 (FdC2)"]
["AT3G09350","turquoise","Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150). Fes1A is cytosolic and associates with cytosolic Hsp70. Mutants showed increased heat-sensitive phenotype suggestion the involvement of Fes1A in acquired thermotolerance. Does not have nucleotide exchange factor activity in vitro.","FES1A (Fes1A)","FES1A (Fes1A)"]
["AT1G28200","turquoise","VirF-interacting protein FIP1","FH INTERACTING PROTEIN 1 (FIP1)","FH INTERACTING PROTEIN 1 (FIP1)"]
["AT4G00030","turquoise","Putative fibrillin, located in chloroplast, involved in photosynthesis.","FIBRILLIN9 (FBN9)","FIBRILLIN9 (FBN9)"]
["AT2G21070","turquoise","This gene is predicted to an encode a nuclear-localized protein that is involved in regulating the period of circadian rhythms without affecting their amplitude or robustness. FIONA1 seems to act as a central oscillator-associated component, but its transcript levels are not regulated in a circadian or light-dependent manner. FIONA1 also appears to be involved in photoperiod-dependent flowering.","FIONA1 (FIO1)","FIONA1 (FIO1)"]
["AT5G12390","turquoise","Encodes a protein with similarity to yeast FIS proteins. These membrane anchored proteins bind DRP proteins and function during organelle division. FIS1B is expressed ubiquitously and appears to be involved in peroxisome division.","FISSION 1B (FIS1B)","FISSION 1B (FIS1B)"]
["AT4G25340","turquoise","Encodes a member of the FKBP-type immunophilin family that functions as a histone chaparone. Binds to 18S rDNA and represses its expression. The N-terminal nucleoplasmin domain interacts with H2A/H2B and H3/H4 histone oligomers, individually, as well as simultaneously, suggesting two different binding sites for H2A/H2B and H3/H4.","FK506 BINDING PROTEIN 53 (FKBP53)","FK506 BINDING PROTEIN 53 (FKBP53); (ATFKBP53)"]
["AT4G28300","turquoise","Encodes a protein with 13.6% proline amino acids that is predicted to localize to the cell wall. The mRNA is cell-to-cell mobile.","FLOE1 (FLOE1)","FLOE1 (FLOE1)"]
["AT2G46020","turquoise","One of three classes of SWI/SNF ATPases; the core enzyme of BRM-associated SWI/SNF (BAS) complexes (PMID:36471048).Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D.","BRAHMA (BRM)","FLORAL FUSED ORGANS 3 (FFO3);CHROMATIN REMODELING 2 (CHR2);ARABIDOPSIS THALIANA BRAHMA (ATBRM);BRAHMA (BRM); (CHA2); (FFO3)"]
["AT1G35460","turquoise","Encodes a bHLH transcription factor involved in CFL1-mediated regulation of cuticle development. Overexpression leads to abnormal cuticle development.","FLOWERING BHLH 1 (FBH1)","FLOWERING BHLH 1 (FBH1);ATCFL1 ASSOCIATED PROTEIN 2 (CFLAP2)"]
["AT4G09180","turquoise","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)","FLOWERING BHLH 2 (FBH2)","FLOWERING BHLH 2 (FBH2)"]
["AT4G16280","turquoise","Involved in the promotion of the transition of the vegetative meristem to reproductive development. Four forms of the protein (alpha, beta, delta and gamma) are produced by alternative splicing. Involved in RNA-mediated chromatin silencing. At one point it was believed to act as an abscisic acid receptor but the paper describing that function was retracted.","FLOWERING CONTROL LOCUS A (FCA)","FLOWERING CONTROL LOCUS A (FCA)"]
["AT5G61920","turquoise","FLX-like protein;(source:Araport11)","FLOWERING LOCUS C EXPRESSOR-LIKE 4 (FLL4)","FLOWERING LOCUS C EXPRESSOR-LIKE 4 (FLL4);FLX LIKE 4 (FLX4)"]
["AT3G04610","turquoise","RNA-binding KH domain-containing protein;(source:Araport11)","FLOWERING LOCUS KH DOMAIN (FLK)","FLOWERING LOCUS KH DOMAIN (FLK); (ATKH11)"]
["AT1G54520","turquoise","FLAP1 is a chloroplast membrane protein of unknown function. When grown in variable light mutants have reduced chloroplast number and size. NPQ is increased relative to wild type under low light.","FLUCTUATING-LIGHT- ACCLIMATION PROTEIN1 (FLAP1)","FLUCTUATING-LIGHT- ACCLIMATION PROTEIN1 (FLAP1)"]
["AT3G07220","turquoise","Forkhead domain protein that is a subunit of ISWI chromatin remodeling complex.Interacts with histones and regulates the expression of genes involved in stamen filament elongation.","FORKHEAD-ASSOCIATED 2 (FHA2)","FORKHEAD-ASSOCIATED 2 (FHA2); (ATFHA2)"]
["AT1G59910","turquoise","Member of family of cytoskeletal-interacting proteins which have the ability to stimulate actin nucleation and barbed-end capping through the combined activity of conserved formin-homology 1 (FH1) and formin-homology 2 (FH2) domains.","FORMIN HOMOLOGUE 7 (FORMIN7)","FORMIN HOMOLOGUE 7 (FORMIN7)"]
["AT5G58160","turquoise","Class II formin; modulator of pollen tube elongation.","FORMIN HOMOLOGY 13 (FH13)","FORMIN HOMOLOGY 13 (FH13)"]
["AT4G33240","turquoise","Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. FAB1A and FAB1B complement the enlarged vacuolar phenotype of the fission yeast ste12delta mutant.","FORMS APLOID AND BINUCLEATE CELLS 1A (FAB1A)","FORMS APLOID AND BINUCLEATE CELLS 1A (FAB1A)"]
["AT1G34260","turquoise","Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the porposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. The mRNA is cell-to-cell mobile.","FORMS APLOID AND BINUCLEATE CELLS 1A (FAB1D)","FORMS APLOID AND BINUCLEATE CELLS 1A (FAB1D)"]
["AT1G65580","turquoise","Endonuclease/exonuclease/phosphatase family protein;(source:Araport11)","FRAGILE FIBER3 (FRA3)","FRAGILE FIBER3 (FRA3)"]
["AT4G17060","turquoise","Encodes one of the FRI interacting proteins: FRIGIDA INTERACTING PROTEIN 1 (FIP1)/At2g06005, FIP2/ At4g17060. FRI (At4G00650) is a major determinant of natural variation in Arabidopsis flowering time.","FRIGIDA INTERACTING PROTEIN 2 (FIP2)","FRIGIDA INTERACTING PROTEIN 2 (FIP2)"]
["AT5G16320","turquoise","family member of FRI-related genes that is required for the winter-annual habit. Genbank accession BK004884","FRIGIDA LIKE 1 (FRL1)","FRIGIDA LIKE 1 (FRL1)"]
["AT5G51830","turquoise","Encodes one of the several Arabidopsis fructokinases. Nomenclature according to Riggs 2017 has been adopted for the family by the community (personal communication, Boernke, Callis, Granot, Boernke, and Smeekens). Important for seed oil accumulation and vascular development.","FRUCTOKINASE 1 (FRK1)","FRUCTOKINASE 1 (FRK1);FRUCTOKINASE 7 (FRK7)"]
["AT2G26990","turquoise","Represses photomorphogenesis and induces skotomorphogenesis in the dark.","FUSCA 12 (FUS12)","FUSCA 12 (FUS12); (ATCSN2);CONSTITUTIVE PHOTOMORPHOGENIC 12 (COP12); (CSN2)"]
["AT1G02090","turquoise","encodes a phosphoprotein that is a subunit of the COP9 signalosome. Mutants exhibit constitutive photomorphogenic phenotype.","FUSCA 5 (FUS5)","FUSCA 5 (FUS5);ARABIDOPSIS THALIANA COP9 SIGNALOSOME SUBUNIT 7 (ATCSN7);CONSTITUTIVE PHOTOMORPHOGENIC 15 (COP15);COP9 SIGNALOSOME SUBUNIT 7 (CSN7)"]
["AT3G13550","turquoise","Encodes a protein similar to ubiquitin-conjugating enzyme (E2) variant proteins (UEV); lacks catalytic cysteine residue found in ubiquitin-conjugating enzyme E2. Represses photomorphogenesis and induces skotomorphogenesis in the dark.","FUSCA 9 (FUS9)","FUSCA 9 (FUS9);EMBRYO DEFECTIVE 144 (EMB144);CONSTITUTIVE PHOTOMORPHOGENIC 10 (COP10);CYTOKININ-INSENSITIVE 4 (CIN4)"]
["AT4G17330","turquoise","gene of unknown function expressed in seedlings, flower buds and stems","G2484-1 PROTEIN (G2484-1)","G2484-1 PROTEIN (ATG2484-1);G2484-1 PROTEIN (G2484-1)"]
["AT3G05120","turquoise","Encodes a gibberellin (GA) receptor ortholog of the rice GA receptor gene (OsGID1). Has GA-binding activity, showing higher affinity to GA4. Interacts with DELLA proteins in vivo in the presence of GA4. The DELLA region alone can interact with GID1A in GA-dependent manner in a Y2H assay.","GA INSENSITIVE DWARF1A (GID1A)","GA INSENSITIVE DWARF1A (ATGID1A);GA INSENSITIVE DWARF1A (GID1A)"]
["AT5G25900","turquoise","Encodes a member of the CYP701A cytochrome p450 family that is involved in later steps of the gibberellin biosynthetic pathway.","GA REQUIRING 3 (GA3)","GA REQUIRING 3 (GA3);ARABIDOPSIS THALIANA ENT-KAURENE OXIDASE 1 (ATKO1);CYTOCHROME P450 701 A3 (CYP701A3)"]
["AT5G44670","turquoise","glycosyltransferase family protein (DUF23);(source:Araport11)","GALACTAN SYNTHASE 2 (GALS2)","GALACTAN SYNTHASE 2 (GALS2)"]
["AT4G20170","turquoise","glycosyltransferase family protein (DUF23);(source:Araport11)","GALACTAN SYNTHASE 3 (GALS3)","GALACTAN SYNTHASE 3 (GALS3)"]
["AT2G47180","turquoise","GolS1 is a galactinol synthase that catalyzes the formation of galactinol from UDP-galactose and myo-inositol. GolS1 transcript levels rise in response to methyl viologen, an oxidative damage-inducing agent. Plants over-expressing GolS1 have increased tolerance to salt, chilling, and high-light stress.","GALACTINOL SYNTHASE 1 (GolS1)","GALACTINOL SYNTHASE 1 (AtGolS1);GALACTINOL SYNTHASE 1 (GolS1)"]
["AT5G30500","turquoise","Nucleotide-diphospho-sugar transferases superfamily protein;(source:Araport11)","GALACTINOL SYNTHASE 10 (GolS10)","GALACTINOL SYNTHASE 10 (GolS10)"]
["AT1G56600","turquoise","GolS2 is a galactinol synthase that catalyzes the formation of galactinol from UDP-galactose and myo-inositol. GolS2 transcript levels rise in response to methyl viologen, an oxidative damage-inducing agent. Plants over-expressing GolS2 have increased tolerance to salt, chilling, and high-light stress.","GALACTINOL SYNTHASE 2 (GolS2)","GALACTINOL SYNTHASE 2 (AtGolS2);GALACTINOL SYNTHASE 2 (GolS2)"]
["AT5G59980","turquoise","Encodes a predicted protein subunit of RNases P/MRP that plays a role in female gametophyte development and male competence.","GAMETOPHYTE DEFECTIVE 1 (GAF1)","GAMETOPHYTE DEFECTIVE 1 (GAF1); (ATRPP30); (RPP30)"]
["AT3G48680","turquoise","Encodes a mitochondrial gamma carbonic anhydrase-like protein. Component of the NADH dehydrogenase complex. The mRNA is cell-to-cell mobile.","GAMMA CARBONIC ANHYDRASE-LIKE 2 (GAMMA CAL2)","GAMMA CARBONIC ANHYDRASE-LIKE 2 (GAMMA CAL2); (AtCAL2)"]
["AT1G23900","turquoise","Encodes large subunit of the heterotetrameric adaptor protein complex AP-1. AP-1 is required for clathrin coated vesicles budding from the trans-Golgi network or plasma membrane.","GAMMA-ADAPTIN 1 (GAMMA-ADAPTIN 1)","GAMMA-ADAPTIN 1 (GAMMA-ADAPTIN 1); (AP1G2);GAMMA-ADAPTIN (Gamma-ADR)"]
["AT5G49300","turquoise","Encodes a member of the GATA factor family of zinc finger transcription factors.","GATA TRANSCRIPTION FACTOR 16 (GATA16)","GATA TRANSCRIPTION FACTOR 16 (GATA16)"]
["AT4G01120","turquoise","bZIP (basic leucine zipper) transcription factor that binds to the G-box regulatory element found in many plant promoters. GBF2 nuclear localization is increased by blue light","G-BOX BINDING FACTOR 2 (GBF2)","G-BOX BINDING FACTOR 2 (GBF2);BASIC REGION/LEUCINE ZIPPER MOTIF 5 (ATBZIP54)"]
["AT1G03970","turquoise","encodes a basic leucine zipper G-box binding factor that can bind to G-box motifs only as heterodimers with GBF2 or GBF3. A single amino acid change can confer G-box binding as homodimers.","G-BOX BINDING FACTOR 4 (GBF4)","G-BOX BINDING FACTOR 4 (GBF4)"]
["AT1G44810","turquoise","GeBP transcription factor required for Cd&#8208;induced growth inhibition.","GEBP-LIKE 4 (GPL4)","GEBP-LIKE 4 (GPL4)"]
["AT1G34760","turquoise","Encodes a 14-3-3 protein. Binds H+-ATPase in response to blue light.","GENERAL REGULATORY FACTOR 11 (GRF11)","GENERAL REGULATORY FACTOR 11 (GRF11);ROOT HAIR SPECIFIC 5 (RHS5); (GF14 OMICRON)"]
["AT2G47790","turquoise","Encodes GIGANTUS1 (GTS1), a member of Transducin/WD40 protein superfamily. Controls seed germination, growth and biomass accumulation.","GIGANTUS 1 (GTS1)","GIGANTUS 1 (GTS1)"]
["AT4G10710","turquoise","encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SPT16.Along with SSRP1 binds to the promoter of FLC.","GLOBAL TRANSCRIPTION FACTOR C (SPT16)","GLOBAL TRANSCRIPTION FACTOR C (SPT16)"]
["AT5G46550","turquoise","DNA-binding bromodomain-containing protein;(source:Araport11)",null,"GLOBAL TRANSCRIPTION FACTOR GROUP E 11 (GTE11)"]
["AT5G14270","turquoise","Bromodomain protein that functions as a negative regulator of sugar and ABA signaling.","BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 9 (BET9)","GLOBAL TRANSCRIPTION FACTOR GROUP E 9 (GTE9);BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 9 (BET9);BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 9 (ATBET9)"]
["AT1G06230","turquoise","This gene is predicted to encode a bromodomain-containing protein. Plant lines expressing RNAi constructs targeted against GTE4 show some resistance to agrobacterium-mediated root transformation.Repress JA biosynthesis by repressing OPR3 expression (PMID:36372880).","GLOBAL TRANSCRIPTION FACTOR GROUP E4 (GTE4)","GLOBAL TRANSCRIPTION FACTOR GROUP E4 (GTE4)"]
["AT4G03550","turquoise","Encodes a callose synthase that is required for wound and papillary callose formation in response to fungal pathogens Erysiphe and Blumeria. Mutants are resistant to P. parasitica and exhibit an exaggerated PR1 response.Contributes to PAMP-induced basal defense. The mRNA is cell-to-cell mobile.","GLUCAN SYNTHASE-LIKE 5 (GSL05)","GLUCAN SYNTHASE-LIKE 5 (ATGSL05); (GSL05); (ATGSL5);POWDERY MILDEW RESISTANT 4 (PMR4);GLUCAN SYNTHASE-LIKE 5 (GSL5);GLUCAN SYNTHASE-LIKE 5 (GSL05);ENHANCER OF EDR1 3 (EED3); (CALS12)"]
["AT5G13110","turquoise","Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root.","GLUCOSE-6-PHOSPHATE DEHYDROGENASE 2 (G6PD2)","GLUCOSE-6-PHOSPHATE DEHYDROGENASE 2 (G6PD2)"]
["AT5G40760","turquoise","Encodes a cytosolic glucose-6-phosphate dehydrogenase that is insensitive to reduction by DTT and whose mRNA is expressed ubiquitously. The mRNA is cell-to-cell mobile.","GLUCOSE-6-PHOSPHATE DEHYDROGENASE 6 (G6PD6)","GLUCOSE-6-PHOSPHATE DEHYDROGENASE 6 (G6PD6)"]
["AT3G47340","turquoise","encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.","GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1 (ASN1)","GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1 (ASN1);DARK INDUCIBLE 6 (DIN6);ARABIDOPSIS THALIANA GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1 (AT-ASN1)"]
["AT1G10270","turquoise","glutamine-rich protein 23;(source:Araport11)","GLUTAMINE-RICH PROTEIN 23 (GRP23)","GLUTAMINE-RICH PROTEIN 23 (GRP23);GLYCINE-RICH PROTEIN 23 (GRP23)"]
["AT2G25080","turquoise","Encodes glutathione peroxidase. The mRNA is cell-to-cell mobile.","GLUTATHIONE PEROXIDASE 1 (GPX1)","GLUTATHIONE PEROXIDASE 1 (ATGPX1);GLUTATHIONE PEROXIDASE 1 (GPX1); (GPXL1)"]
["AT2G02930","turquoise","Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).","GLUTATHIONE S-TRANSFERASE F3 (GSTF3)","GLUTATHIONE S-TRANSFERASE F3 (ATGSTF3);GLUTATHIONE S-TRANSFERASE 16 (GST16);GLUTATHIONE S-TRANSFERASE F3 (GSTF3)"]
["AT2G29420","turquoise","Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). Induced by Salicylic acid. Independent of NPR1 for their induction by salicylic acid.","GLUTATHIONE S-TRANSFERASE TAU 7 (GSTU7)","GLUTATHIONE S-TRANSFERASE TAU 7 (GSTU7);GLUTATHIONE S-TRANSFERASE 25 (GST25);GLUTATHIONE S-TRANSFERASE TAU 7 (ATGSTU7)"]
["AT2G02390","turquoise","Encodes glutathione transferase belonging to the zeta class of GSTs. Naming convention according to Wagner et al. (2002). The protein undergoes spontaneous thiolation following treatment with the oxidant tert-butylhydroperoxide. It functions in vitro as a maleylacetoacetate isomerase and is likely to be involved in tyrosine catabolism.","GLUTATHIONE S-TRANSFERASE ZETA 1 (GSTZ1)","GLUTATHIONE S-TRANSFERASE ZETA 1 (ATGSTZ1);GLUTATHIONE S-TRANSFERASE 18 (GST18);GLUTATHIONE S-TRANSFERASE ZETA 1 (GSTZ1);MALEYLACETOACETATE ISOMERASE (MAAI); (ATMAAI)"]
["AT2G21060","turquoise","Glycine-rich protein (AtGRP2b). Also named as CSP4 (cold shock domain protein 4) containing a well conserved cold shock domain (CSD) and glycine-rich motifs interspersed by two retroviral-like CCHC zinc fingers. AtCSP4 is expressed in all tissues but accumulates in reproductive tissues and those undergoing cell divisions. Overexpression of AtCSP4 reduces silique length and induces embryo lethality.","GLYCINE-RICH PROTEIN 2B (GRP2B)","GLYCINE-RICH PROTEIN 2B (ATGRP2B);COLD SHOCK DOMAIN PROTEIN 4 (ATCSP4);GLYCINE-RICH PROTEIN 2B (GRP2B)"]
["AT1G74230","turquoise","encodes a glycine-rich RNA binding protein. The mRNA is cell-to-cell mobile.","RNA-BINDING GLYCINE-RICH PROTEIN A2 (RBGA2)","GLYCINE-RICH RNA-BINDING PROTEIN 5 (GR-RBP5);RNA-BINDING GLYCINE-RICH PROTEIN A2 (RBGA2);ORGANELLE RNA RECOGNITION MOTIF-CONTAINING4 (ORRM4)"]
["AT2G28420","turquoise","Vicinal oxygen chelate (VOC) superfamily member.","GLYOXYLASE I 8 (GLYI8)","GLYOXYLASE I 8 (GLYI8)"]
["AT1G52920","turquoise","Encodes a plasma membrane?localized ABA receptor, which interacts with the G&#945;&#946;&#947; complex. It has been postulated that the binding of ABA to GCR2 results in the release of the G protein and dissociation of the heterotrimeric complex into G&#945; and the G&#946;&#947; dimer to activate downstream ABA effectors and to trigger the ABA responses.","G PROTEIN COUPLED RECEPTOR (GPCR)","G-PROTEIN COUPLED RECEPTOR 2 (GCR2);G PROTEIN COUPLED RECEPTOR (GPCR)"]
["AT5G02310","turquoise","Encodes PROTEOLYSIS6 (PRT6), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Another component of the N-end rule pathway is arginyl-tRNA:protein arginyltransferase (ATE). Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. The mRNA is cell-to-cell mobile.","PROTEOLYSIS 6 (PRT6)","GREENING AFTER EXTENDED DARKNESS 1 (GED1);PROTEOLYSIS 6 (PRT6)"]
["AT1G01160","turquoise","Encodes GRF1-interacting factor 2 (GIF2), a subunit shared by BRM- and SYD-associated SWI/SNF complexes.","GRF1-INTERACTING FACTOR 2 (GIF2)","GRF1-INTERACTING FACTOR 2 (GIF2)"]
["AT4G16440","turquoise","Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs in&#64258;Uences Morphogenesis). Heterologous expression of Gollum in E. coli indicates that it probably contains two [Fe-S] clusters with different magnetic properties. Sequence alignment analysis indicates that these two clusters would be topologically equivalent to the mesial and proximal [Fe-S] centers of [FeFe]-hydrogenases. Knockdown mutants (RNAi) show a dwarf phenotype at the normal atmospheric partial oxygen pressure of 21 kPa. This dwarf phenotype could be rescued by growing the plant under low oxygen pressure (5kPa), suggesting a role for this gene in oxygen sensing.","HOMOLOG OF YEAST NAR1 (NAR1)","GROWTH AT DIFFERENT OXYGEN LEVELS INFLUENCES MORPHOGENESIS (GOLLUM);HOMOLOG OF YEAST NAR1 (NAR1)"]
["AT1G13450","turquoise","Encodes GT-1, a plant transcription factor that binds to one of the cis-acting elements, BoxII, which resides within the upstream promoter region of light-responsive genes. GT-1 was assumed to act as a molecular switch modulated through Ca(2+)-dependent phosphorylation/dephosphorylation in response to light signals.","GT-1 (GT-1)","GT-1 (GT-1)"]
["AT5G46070","turquoise","Assembles liquid-liquid phase separation (LLPS)-driven condensates within the nucleus to protect against infection and autoimmunity. Within membraneless organelles termed GBPL defence-activated condensates (GDACs), directly binds defence-gene promoters and recruited specifc transcriptional coactivators of the Mediator complex and RNA polymerase II machinery to massively reprogram host gene expression for disease resistance.GBPL3 localizes to the nuclear pore complex and functionally connects the nuclear basket with the nucleoskeleton (PMID:36269771).","GUANYLATE-BINDING PROTEIN-LIKE 3 (GBPL3)","GUANYLATE-BINDING PROTEIN-LIKE 3 (GBPL3)"]
["AT5G05930","turquoise","guanylyl cyclase 1;(source:Araport11)","GUANYLYL CYCLASE 1 (GC1)","GUANYLYL CYCLASE 1 (GC1);ARABIDOPSIS GUANYLYL CYCLASE 1 (ATGC1)"]
["AT1G27500","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","H CELLULOSE SYNTHASE?MICROTUBULE UNCOUPLING 3 (CMU3)","H CELLULOSE SYNTHASE?MICROTUBULE UNCOUPLING 3 (CMU3)"]
["AT5G54390","turquoise","Encodes a 3'-phosphoadenosine-5'-phosphate (PAP) phosphatase that is sensitive to physiological concentrations of Na+. It does not also act as inositol polyphosphate 1-phosphatases, which other members of the HAL2-like family do. It is proposed that AHL acts in concert with sulphotransferases to prevent both the toxicity of PAP on RNA processing enzymes as well as the product inhibition of PAP on sulphate conjugation. The mRNA is cell-to-cell mobile.","HAL2-LIKE (HL)","HAL2-LIKE (HL); (ATAHL);HAL2-LIKE (AHL)"]
["AT1G20200","turquoise","PAM domain (PCI/PINT associated module) protein;(source:Araport11)","EMBRYO DEFECTIVE 2719 (emb2719)","HAPLESS 15 (HAP15);EMBRYO DEFECTIVE 2719 (emb2719)"]
["AT1G08845","turquoise","Member of the uL18 RNA-binding protein family. uL18 proteins share a short structurally conserved domain that binds the 5S rRNA and allow its incorporation into ribosomes.","HEARTSTOPPER (HES)","HEARTSTOPPER (HES); (UL18-L5)"]
["AT5G12030","turquoise","Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development.","HEAT SHOCK PROTEIN 17.6A (HSP17.6A)","HEAT SHOCK PROTEIN 17.6A (AT-HSP17.6A);HEAT SHOCK PROTEIN 17.6A (HSP17.6A);HEAT SHOCK PROTEIN 17.6 (HSP17.6)"]
["AT1G16030","turquoise","heat shock protein 70B;(source:Araport11)","HEAT SHOCK PROTEIN 70B (Hsp70b)","HEAT SHOCK PROTEIN 70B (Hsp70b);HEAT SHOCK PROTEIN 70-5 (HSP70-5)"]
["AT5G52640","turquoise","Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. The mRNA is cell-to-cell mobile.","HEAT SHOCK PROTEIN 90.1 (HSP90.1)","HEAT SHOCK PROTEIN 81-1 (HSP81-1); (ATHS83); (HSP81.1);HEAT SHOCK PROTEIN 90.1 (HSP90.1);HEAT SHOCK PROTEIN 90.1 (ATHSP90.1);HEAT SHOCK PROTEIN 90-1 (AtHsp90-1);HEAT SHOCK PROTEIN 83 (HSP83)"]
["AT2G25140","turquoise","Encodes ClpB4, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Targeted to the mitochondrion, also referred to as ClpB-m. Transcripts of ClpB4 accumulate dramatically at high temperatures, suggesting that it may be involved in response to heat stress.","CASEIN LYTIC PROTEINASE B4 (CLPB4)","HEAT SHOCK PROTEIN 98.7 (HSP98.7);CASEIN LYTIC PROTEINASE B-M (CLPB-M);CASEIN LYTIC PROTEINASE B4 (CLPB4)"]
["AT5G18065","turquoise","target of trans acting-siR480/255 protein;(source:Araport11)","HEAT-INDUCED TAS1 TARGET 3 (HTT3)","HEAT-INDUCED TAS1 TARGET 3 (HTT3)"]
["AT2G32120","turquoise","heat-shock protein 70T-2;(source:Araport11)","HEAT-SHOCK PROTEIN 70T-2 (HSP70T-2)","HEAT-SHOCK PROTEIN 70T-2 (HSP70T-2);HEAT SHOCK 70 KDA PROTEIN 8 (HSP70-8)"]
["AT2G36950","turquoise","Heavy metal transport/detoxification superfamily protein;(source:Araport11)","HEAVY METAL ASSOCIATED PROTEIN 20 (ATHMP20)","HEAVY METAL ASSOCIATED PROTEIN 20 (ATHMP20)"]
["AT3G05220","turquoise","Heavy metal transport/detoxification superfamily protein;(source:Araport11)","HEAVY METAL ASSOCIATED PROTEIN 23 (ATHMP23)","HEAVY METAL ASSOCIATED PROTEIN 23 (ATHMP23)"]
["AT1G50460","turquoise","Involved in glucose-ethylene crosstalk.","HEXOKINASE-LIKE 1 (HKL1)","HEXOKINASE-LIKE 1 (HKL1); (ATHKL1)"]
["AT3G28730","turquoise","encodes a component of the FAcilitates Chromatin Transcription (FACT) complex, SSRP1. Along with STP16 binds to the promoter of FLC.","HIGH MOBILITY GROUP (HMG)","HIGH MOBILITY GROUP (ATHMG); (SSRP1);NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR D (NFD);HIGH MOBILITY GROUP (HMG)"]
["AT1G48620","turquoise","This gene is predicted to encodes a histone H1/H5 family member. A plant line expressing an RNAi construct targeted against HON5 shows a reduced level of agrobacterium-mediated root transformation.","HIGH MOBILITY GROUP A5 (HON5)","HIGH MOBILITY GROUP A5 (HON5)"]
["AT3G51880","turquoise","Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins that have a distinctive DNA-binding motif, the HMG-box domain. The motif confers non-sequence specific interaction with linear DNA and structure-specific binding to distorted DNA sites. The HMGB proteins are involved in the assembly of nucleoprotein complexes. Can be phosphorylated by CK2alpha. In interphase cells, HMGB1 is found throughout the nucleus, whereas in mitotic cells it is not chromatin-associated.","HIGH MOBILITY GROUP B1 (HMGB1)","HIGH MOBILITY GROUP B1 (HMGB1);NUCLEOSOME/CHROMATIN ASSEMBLY FACTOR D1 (NFD1); (AtHMGB1)"]
["AT1G60995","turquoise","ER localized protein involved in regulation of sterol metabolism. Regulates the accumulation of HMGR1 and HMGR2. HISE1 shares 50% amino acid sequence similarity (50% positive substitution) with the mouse ER membrane protein membralin (NP_001346561.1; PMID:31712757)","HIGH STEROL ESTER 1 (HISE1)","HIGH STEROL ESTER 1 (HISE1)"]
["AT1G66080","turquoise","Encodes a glucose-regulated protein that binds to the promoters of glucose-regulated heat shock responsive genes and promotes chromatin acetylation. HLP1 is required in maintaining histone H3K acetylation and H3K4 methylation marks at the promoters of heat shock protein genes in providing thermotolerance/thermomemory response.","HIKESHI-LIKE PROTEIN1 (HLP1)","HIKESHI-LIKE PROTEIN1 (HLP1);HIKESHI-LIKE (HKL)"]
["AT1G27320","turquoise","Encodes a histidine kinases, a cytokinin receptor that controls cytokinin-mediated leaf longevity through a specific phosphorylation of the response regulator, ARR2. The mRNA is cell-to-cell mobile.","HISTIDINE KINASE 3 (HK3)","HISTIDINE KINASE 3 (AHK3);HISTIDINE KINASE 3 (HK3);REPRESSOR OF CYTOKININ DEFICIENCY 3 (ROCK3)"]
["AT3G27360","turquoise","Histone superfamily protein;(source:Araport11)","HISTONE 3.1 (H3.1)","HISTONE 3.1 (H3.1); (HTR3)"]
["AT1G79000","turquoise","Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation.","HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1 (HAC1)","HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 1 (HAC1)"]
["AT1G16710","turquoise","Encodes an enzyme with histone acetyltransferase activity that can use both H3 and H4 histones as substrates. No single prior lysine acetylation is sufficient to block HAC12 acetylation of the H3 or H4 peptides, suggesting that HAC12 can acetylate any of several lysines present in the peptides.","HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 12 (HAC12)","HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 12 (HAC12)"]
["AT3G12980","turquoise","Encodes an enzyme with histone acetyltransferase activity that can use both H3 and H4 histones as substrates. No single prior lysine acetylation is sufficient to block HAC5 acetylation of the H3 or H4 peptides, suggesting that HAC5 can acetylate any of several lysines present in the peptides. Di-acetylation of both lysines 9 and 14 on the H3 peptide significantly reduces the level of incorporated radioactive acetylation catalyzed by HAC5, indicating that HAC5 may acetylate either lysine 9 or lysine 14. The mRNA is cell-to-cell mobile.","HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 5 (HAC5)","HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 5 (HAC5);HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 5 (ATHPCAT4)"]
["AT5G64610","turquoise","Encodes an enzyme with histone acetyltransferase activity. HAM1 primarily acetylate histone H4, but also display some ability to acetylate H3. Prior acetylation of lysine 5 on histone H4 reduces radioactive acetylation by either HAM1. HAM1 acetylates histone H4 lysine 5.","HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 1 (HAM1)","HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 1 (HAM1)"]
["AT5G03740","turquoise","HD2-type histone deacetylase HDAC. Involved in the ABA and stress responses. Mediates transcriptional repression via histone modification.","HISTONE DEACETYLASE 2C (HD2C)","HISTONE DEACETYLASE 2C (HD2C);HISTONE DEACETYLASE 3 (HDT3)"]
["AT1G55250","turquoise","Encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B.","HISTONE MONO-UBIQUITINATION 2 (HUB2)","HISTONE MONO-UBIQUITINATION 2 (HUB2)"]
["AT5G15210","turquoise","Encodes ZFHD3, a member of the zinc finger homeodomain transcriptional factor family.","HOMEOBOX PROTEIN 30 (HB30)","HOMEOBOX PROTEIN 30 (ATHB30);ZINC FINGER HOMEODOMAIN 3 (ZFHD3);ZINC FINGER HOMEODOMAIN 8 (ZHD8);HOMEOBOX PROTEIN 30 (HB30)"]
["AT1G28420","turquoise","homeobox-1;(source:Araport11)","HOMEOBOX-1 (HB-1)","HOMEOBOX-1 (HB-1);RINGLET 1 (RLT1)"]
["AT1G79050","turquoise","recA DNA recombination family protein;(source:Araport11)","HOMOLOG OF BACTERIAL RECA (RECA1)","HOMOLOG OF BACTERIAL RECA (RECA1)"]
["AT4G29820","turquoise","Encodes a homolog of the protein CFI-25, a polyadenylation factor subunit.","HOMOLOG OF CFIM-25 (CFIM-25)","HOMOLOG OF CFIM-25 (CFIM-25);ARABIDOPSIS THALIANA HOMOLOG OF CFIM-25 (ATCFIM-25)"]
["AT4G25540","turquoise","encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH3 heterodimers bound 'insertion-deletion' DNA with three nucleotides (+AAG) or one nucleotide (+T) looped out much better than they bound DNA with a base/base mispair (T/G).","HOMOLOG OF DNA MISMATCH REPAIR PROTEIN MSH3 (MSH3)","HOMOLOG OF DNA MISMATCH REPAIR PROTEIN MSH3 (MSH3); (ATMSH3)"]
["AT2G12550","turquoise","ubiquitin-associated (UBA)/TS-N domain-containing protein;(source:Araport11)","HOMOLOG OF HUMAN NUB1 (NUB1)","HOMOLOG OF HUMAN NUB1 (NUB1)"]
["AT3G19210","turquoise","Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases. Functions in DNA repair via homologous recombination.","HOMOLOG OF RAD54 (RAD54)","HOMOLOG OF RAD54 (ATRAD54); (CHR25);HOMOLOG OF RAD54 (RAD54)"]
["AT5G41370","turquoise","Encodes XPB1, a DNA repair protein and transcription factor. Arabidopsis thaliana has duplicated XPB gene (AtXPB1 and AtXPB2, with high similarity to each other). XPB proteins are involved in both DNA repair and transcription, they are component of the transcription factor IIH (TFIIH) and are responsible for DNA helicase activity during nucleotide (nt) excision repair (NER). Complementation assays in yeast rad25 mutant strains suggest the involvement of AtXPB2 in DNA repair. Although both genes are expressed in a constitutive manner during the plant life cycle, Northern blot analyses suggest that light modulates the expression level of both XPB copies. The mRNA is cell-to-cell mobile.","HOMOLOG OF XERODERMA PIGMENTOSUM COMPLEMENTATION GROUP B 1 (XPB1)","HOMOLOG OF XERODERMA PIGMENTOSUM COMPLEMENTATION GROUP B 1 (XPB1);ARABIDOPSIS HOMOLOG OF XERODERMA PIGMENTOSUM COMPLEMENTATION GROUP B 1 (ATXPB1)"]
["AT3G07740","turquoise","encodes a transcriptional adaptor ADA2a that interacts with histone acetyltransferase GCN5 homolog and CBF1.In the PAGA complex, ADA2A functions as a bridge protein that is responsible for connecting GCN5 and SPC, and ADA2A and SPC together increase the acetylation activity of GCN5.","HOMOLOG OF YEAST ADA2 2A (ADA2A)","HOMOLOG OF YEAST ADA2 2A (ADA2A)"]
["AT4G16420","turquoise","Transcriptional co-activator. Essential for the developmental switch from cell proliferation to cell differentiation in response to variations in auxin and cytokinin concentrations. ADA2B is required for the maintenance of the acetylation activity of GCN5 in the SAGA complex.","HOMOLOG OF YEAST ADA2 2B (ADA2B)","HOMOLOG OF YEAST ADA2 2B (ADA2B);PROPORZ1 (PRZ1)"]
["AT1G03380","turquoise","yeast autophagy 18 G-like protein;(source:Araport11)","HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) G (ATG18G)","HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) G (ATATG18G);HOMOLOG OF YEAST AUTOPHAGY 18 (ATG18) G (ATG18G)"]
["AT5G18400","turquoise","Cytosolic Iron-sulfur cluster Assembly protein.","(DRE2)","HOMOLOG OF YEAST DRE2 (ATDRE2); (DRE2)"]
["AT5G62050","turquoise","essential factor for protein sorting and assembly into membranes","HOMOLOG OF YEAST OXIDASE ASSEMBLY 1 (OXA1) (OXA1)","HOMOLOG OF YEAST OXIDASE ASSEMBLY 1 (OXA1) IN ARABIDOPSIS THALIANA (OXA1AT);ARABIDOPSIS THALIANA HOMOLOG OF YEAST OXIDASE ASSEMBLY 1 (OXA1) (ATOXA1);HOMOLOG OF YEAST OXIDASE ASSEMBLY 1 (OXA1) (OXA1); (OXA1A)"]
["AT1G62740","turquoise","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. The mRNA is cell-to-cell mobile.","HOP2 (Hop2)","HOP2 (Hop2)"]
["AT4G12400","turquoise","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","HOP3 (Hop3)","HOP3 (Hop3)"]
["AT4G31750","turquoise","Encodes HopW1-1-Interacting protein 2 (WIN2). Interacts with the P. syringae effector HopW1-1. WIN2 has protein phosphatase activity. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600; WIN2: AT4G31750; WIN3: AT5G13320).","HOPW1-1-INTERACTING 2 (WIN2)","HOPW1-1-INTERACTING 2 (WIN2)"]
["AT5G59830","turquoise","Interacts with several P. syringae effectors. Regulates a wide range of pathogen-responsive biological processes.","HOPZ1A INTERACTOR 1 (ZIN 1)","HOPZ1A INTERACTOR 1 (ZIN 1)"]
["AT3G57750","turquoise","Encodes a pseudokinase that likely acts as a decoy to lure the P. syringae effector acetyltransferase HopZ1a to the ZAR1-resistance complex, resulting in effector-triggered immunity (ETI) activation. It is acetylated by HopZ1a.","HOPZ-ETI-DEFICIENT 1 (ZED1)","HOPZ-ETI-DEFICIENT 1 (ZED1)"]
["AT3G17880","turquoise","Encodes a thioredoxin-like disulfide reductase. The protein interacts with the yeast Hsp70 protein Ssb2 in vitro. This interaction is sensitive to the redox status of the thioredoxin domain of AtTDX.","TETRATICOPEPTIDE DOMAIN-CONTAINING THIOREDOXIN (TDX)","HSC-70 INTERACTING PROTEIN (HIP);TETRATICOPEPTIDE DOMAIN-CONTAINING THIOREDOXIN (ATTDX);ARABIDOPSIS THALIANA HSP70-INTERACTING PROTEIN 2 (ATHIP2);TETRATICOPEPTIDE DOMAIN-CONTAINING THIOREDOXIN (TDX)"]
["AT2G06990","turquoise","Encodes a putative DExH-box RNA helicase that acts redundantly with HEN1, HUA1, and HUA2 in the specification of floral organ identity in the third whorl.","HUA ENHANCER 2 (HEN2)","HUA ENHANCER 2 (HEN2);SUPPRESSOR OF PAS2 3 (SOP3); (SMN2)"]
["AT3G63070","turquoise","HUA and HUA-LIKE (HULK) genes act redundantly to regulate a subset of essential genes, with some (or all) family members also having specific functions. The mRNA is cell-to-cell mobile.","HUA2 LIKE 3 (HULK3)","HUA2 LIKE 3 (HULK3); (SL4)"]
["AT4G02730","turquoise","Transducin/WD40 repeat-like superfamily protein;(source:Araport11)","HUMAN WDR5 (WD40 REPEAT) HOMOLOG B (WDR5b)","HUMAN WDR5 (WD40 REPEAT) HOMOLOG B (WDR5b); (AtWDR5b)"]
["AT4G36720","turquoise","HVA22-like protein K;(source:Araport11)","HVA22-LIKE PROTEIN K (HVA22K)","HVA22-LIKE PROTEIN K (HVA22K)"]
["AT5G64090","turquoise","Part of a nanodomain complex that tethers PI4K&#945;1 to the plasma membrane.","HYCCIN 2 (HYC2)","HYCCIN 2 (HYC2)"]
["AT5G55210","turquoise","Encodes a subunit shared by BRM-, SYD-, and MINU1/2-associated SWI/SNF chromatin remodeling complexes. An ortholog of the human SWI/SNF subunits BCL7a/b/c. Involved in hygromycin resistance through facilitating hygromycin phosphotransferase transportation from cytosol to chloroplast.","HYGROMYCIN-SENSITIVE 1 (HS1)","HYGROMYCIN-SENSITIVE 1 (HS1);BCL-DOMAIN HOMOLOG 2 (BDH2); (BCL7B)"]
["AT2G30350","turquoise","Member of the SLX1 subfamily of GIY-YIG endonucleases.","HYL1 INTERACTING GIY-YIG LIKE ENDONUCLEASE (HIGLE)","HYL1 INTERACTING GIY-YIG LIKE ENDONUCLEASE (HIGLE)"]
["AT1G69840","turquoise","SPFH/Band 7/PHB domain-containing membrane-associated protein family;(source:Araport11)","HYPERSENSITIVE INDUCED REACTION 1 (ATHIR1)","HYPERSENSITIVE INDUCED REACTION 1 (ATHIR1)"]
["AT5G51570","turquoise","SPFH/Band 7/PHB domain-containing membrane-associated protein family;(source:Araport11)","HYPERSENSITIVE INDUCED REACTION 3 (HIR3)","HYPERSENSITIVE INDUCED REACTION 3 (HIR3)"]
["AT4G23660","turquoise","Encodes para-hydroxy benzoate polyprenyl diphosphate transferase. The enzyme was shown to be able to use a wide range of prenyl substrates : from GPP (C10) to decaprenyl diphosphate (C50). Mutants develop HR-like necrotic lesions and displays enhanced resistance to virulent bacterial and oomycete pathogens. Constitutively expresses SA- and ET/JA-responsive defense genes, accumulates elevated levels of ROS, SA and ethylene.","POLYPRENYLTRANSFERASE 1 (PPT1)","HYPERSENSITIVE RESPONSE-LIKE LESION 1 (HRL1);POLYPRENYLTRANSFERASE 1 (PPT1)"]
["AT3G16730","turquoise","condensin-2 complex subunit H2-like protein;(source:Araport11)","HYPERSENSITIVE TO EXCESS BORON 2 (HEB2)","HYPERSENSITIVE TO EXCESS BORON 2 (HEB2); (CAP-H2)"]
["AT3G10020","turquoise","plant/protein;(source:Araport11)","HYPOXIA RESPONSE UNKNOWN PROTEIN 26 (HUP26)","HYPOXIA RESPONSE UNKNOWN PROTEIN 26 (HUP26)"]
["AT3G06810","turquoise","Encodes a protein with similarity to acyl-CoA dehydrogenases. Mutations in IBR3 render plants resistant to indole-3-butryic acid, a putative storage form of the biologically active auxin IAA (indole-3-acetic acid). IBR3 is hypothesized to carry out the second step in a &#946;-oxidation-like process of IBA metabolism in Arabidopsis. Though its subcellular location has not been determined, IBR3 has a peroxisomal targeting sequence and two other putative IBA metabolic enzymes (IBR1 and IBR10) can be found in this organelle. No specific enzymatic activity has been documented for IBR3, but double mutant analyses with CHY1 argue against a role for IBR3 in general fatty acid &#946;-oxidation. The mRNA is cell-to-cell mobile.","IBA-RESPONSE 3 (IBR3)","IBA-RESPONSE 3 (IBR3)"]
["AT4G31270","turquoise","Encodes IDAP2. Acts together with IDAP1 and IDM1 to regulate active DNA demethylation.","IDM1-ASSOCIATED PROTEIN 2 (IDAP2)","IDM1-ASSOCIATED PROTEIN 2 (IDAP2);HARBINGER TRANSPOSON-DERIVED PROTEIN 2 (HDP2)"]
["AT3G23900","turquoise","Physically interacts with, and promotes canonical splicing of, transcripts encoding defense signaling proteins, including the key negative regulator of pattern recognition receptor signaling complexes, CALCIUM-DEPENDENT PROTEIN KINASE 28 (CPK28). Upon immune activation by Plant Elicitor Peptides (Peps), IRR is dephosphorylated, disrupting interaction with CPK28 transcripts and resulting in accumulation of an alternative splice variant encoding a truncated CPK28 protein with impaired kinase activity and diminished function as a negative regulator.","IMMUNOREGULATORY RNA-BINDING PROTEIN (IRR)","IMMUNOREGULATORY RNA-BINDING PROTEIN (IRR)"]
["AT1G09270","turquoise","Protein interacts with Agrobacterium proteins VirD2 and VirE2.","IMPORTIN ALPHA ISOFORM 4 (IMPA-4)","IMPORTIN ALPHA ISOFORM 4 (IMPA-4)"]
["AT5G03070","turquoise","Putative importin alpha isoform. When overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.","IMPORTIN ALPHA ISOFORM 9 (IMPA-9)","IMPORTIN ALPHA ISOFORM 9 (IMPA-9)"]
["AT1G48490","turquoise","Protein kinase which together with IREH1 plays an important role in controlling root skewing and maintaining the microtubule network.","INCOMPLETE ROOT HAIR ELONGATION 3 (IRE3)","INCOMPLETE ROOT HAIR ELONGATION 3 (IRE3)"]
["AT3G07610","turquoise","IBM1 likely encodes a protein with histone H3mK9 demethylation activity. It may preferentially demethylate H3mK9 at low-copy loci to protect them from silencing by nearby heterochromatin by preventing the spread of cytosine methylation. BONSAI (At1g73177) is hypermethylated in ibm1 mutants. ibm1 mutants have morphological defects that become apparent at the F3 generation, including small narrow leaves, arrested flower development, and faulty pollen development. These phenotypes cannot result solely from the BONSAI hypermethylation. Aberrant phenotypes in ibm1 mutants in both DNA methylation and plant development can be suppressed by mutations in the KYP H3K9 methyltransferase or the CMT3 non CG-cytosine methylase.","INCREASE IN BONSAI METHYLATION 1 (IBM1)","INCREASE IN BONSAI METHYLATION 1 (IBM1)"]
["AT3G12360","turquoise","Encodes a protein with an ankyrin motif and transmembrane domains that is involved in salt tolerance. Expressed throughout the plant and localized to the plasma membrane. Loss of function mutations show an increased tolerance to salt based on assaying seedling growth in the presence of salt. In the mutants, induction of genes required for production of reactive oxygen species is reduced suggesting that itn1 promotes ROS production. It interacts with RCN1 in vivo and may regulate its subcellular localization. The mRNA is cell-to-cell mobile.","INCREASED TOLERANCE TO NACL (ITN1)","INCREASED TOLERANCE TO NACL (ITN1)"]
["AT5G13570","turquoise","Encodes DCP2 with mRNA decapping activity. DCP2 forms a mRNA decapping complex with DCP1 (At1g08370) and VCS (VARICOSE) (At3g13300). Recombinant DCP2 is enzymatically active in vitro, generating from capped mRNAs m7GDP, and 5?-phosphorylated mRNAs. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. The protein was shown by immunoprecipitation not to interact with DCP1.","DECAPPING 2 (DCP2)","INCREASED TRANSGENE SILENCING 1 (ITS1);DECAPPING 2 (DCP2)"]
["AT1G55110","turquoise","indeterminate(ID)-domain 7;(source:Araport11)","INDETERMINATE(ID)-DOMAIN 7 (IDD7)","INDETERMINATE(ID)-DOMAIN 7 (AtIDD7); (REDSTART);INDETERMINATE(ID)-DOMAIN 7 (IDD7)"]
["AT2G04550","turquoise","Encodes a protein phosphatase that interacts with MPK12, but not with other MAP kinases. It can dephosphorylate a dually phosphorylated MPK12 in vitro and can inactivate MPK12 in vivo. ibr5 mutants have reduced sensitivity to auxin and abscisic acid. IBR5 promotes auxin responses, including auxin-inducible transcription, differently than the TIR1 auxin receptor and without destabilizing Aux/IAA repressor proteins. It plays a role in male gametophyte development, auxin and TCP growth regulatory pathways. Regulates leaf serrations development via modulation of the expression of PIN1.","INDOLE-3-BUTYRIC ACID RESPONSE 5 (IBR5)","INDOLE-3-BUTYRIC ACID RESPONSE 5 (IBR5);DUAL SPECIFICITY PROTEIN PHOSPHATASE 1E (DSPTP1E)"]
["AT3G26744","turquoise","Encodes a MYC-like bHLH transcriptional activator that binds specifically to the MYC recognition sequences in the CBF3 promoter. It also binds to and inhibits the expression of ABI3. Mutants are defective in cold-regulated gene expression and ABA signaling druing seed germination.. Cold stress triggers protein degradation of nuclear GFPICE1 protein, and the RING finger protein HOS1 is required. Sumoylation of ICE1 controls CBF3/DREB1A expression and freezing tolerance. Together with ZOU, ICE1 determines primary seed dormancy depth independently of their joint role in endosperm development.ICE1 interacts with ABI5. Also members of the DELLA family, which repress ICE1 function.","INDUCER OF CBF EXPRESSION 1 (ICE1)","INDUCER OF CBF EXPRESSION 1 (ICE1);A. THALIANA INDUCER OF CBP EXPRESSION 1 (ATICE1);SCREAM (SCRM); (SCREAM)"]
["AT5G67610","turquoise","Encodes an orthlog of the Xenopus inner nuclear membrane (INM) protein Nemp1/TMEM194A. It is an inner nuclear membrane protein that binds with nucleoskeleton proteins.","INNER NUCLEAR MEMBRANE PROTEIN B (NEMP_B)","INNER NUCLEAR MEMBRANE PROTEIN B (NEMP_B); (PNET2_B); (PNET2)"]
["AT3G57300","turquoise","Encodes the Arabidopsis INO80 ortholog of the SWI/SNF ATPase family that has been shown to interact with H2A.Z and facilitates the enrichment of H2A.Z at the ends of the flowering repressor genes FLC and MAF4/5. Functions as a positive regulator of DNA homologous recombination (HR) and plays a crucial role in genome stability maintenance. In INO80 mutants, the HR frequency is reduced to 15% of that in the wild-type. Plants mutated in INO80 display a pleiotropic phenotype including smaller plant and organ size, and late flowering but are not more sensitive to genotoxic agents or less efficient at T-DNA integration. INO80 has also been shown to regulate a subset of the Arabidopsis transcriptome.","INO80 ORTHOLOG (INO80)","INO80 ORTHOLOG (INO80)"]
["AT4G33770","turquoise","Inositol pyrophosphate kinase. Catalyzes the phosphorylation of phytic acid (InsP6) to the symmetric InsP7 isomer 5-InsP7.","INOSITOL 1,3,4-TRISPHOSPHATE 5/6 KINASE 2 (ITPK2)","INOSITOL 1,3,4-TRISPHOSPHATE 5/6 KINASE 2 (ITPK2); (ATITPK2)"]
["AT4G25550","turquoise","Cleavage/polyadenylation specificity factor, 25kDa subunit;(source:Araport11)","INVOLVED IN RRNA PROCESSING 9 (IRP9)","INVOLVED IN RRNA PROCESSING 9 (IRP9)"]
["AT1G13340","turquoise","Regulator of Vps4 activity in the MVB pathway protein;(source:Araport11)","IST1-LIKE 6 (ISTL6)","IST1-LIKE 6 (ISTL6)"]
["AT1G08840","turquoise","Encodes a homolog of human and yeast DNA2. Mutants have increased sensitivity to DNA damage stress.","EMBRYO DEFECTIVE 2411 (emb2411)","JING HE SHENG 1 (JHS1);EMBRYO DEFECTIVE 2411 (emb2411)"]
["AT4G20400","turquoise","Encodes a histone H3K4 demethylase repressing floral transition.Coordinates and structure features have been deposited in the RCSB Protein Data Bank with the accession codes 5YKN (JMJ14CD) and 5YKO(JMJ14CD-NOG-H3K4em3 complex). Glu285 and Glu516 contribute to the recognition of H3R2. Asp312 contributes to the recognition of H3Q5. Phe171 and Val363 contribute to the recognition of H3A7. Ser290, Trp296, and Tyr298 contribute to the recognition of H3K4me3 (PMID:29233856).","JUMONJI 14 (JMJ14)","JUMONJI 14 (JMJ14); (PKDM7B)"]
["AT1G78280","turquoise","transferases, transferring glycosyl groups;(source:Araport11)","JUMONJI21 (JMJ21)","JUMONJI21 (JMJ21)"]
["AT4G38600","turquoise","encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.","KAKTUS (KAK)","KAKTUS (KAK);UBIQUITIN-PROTEIN LIGASE 3 (UPL3)"]
["AT5G13530","turquoise","Encodes KEEP ON GOING (KEG), a RING E3 ligase involved in abscisic acid signaling. KEG is essential for Arabidopsis growth and development. ABA promotes KEG degradation via the ubiquitin dependent 26S proteasome pathway. Associates with and ubiquitinates MKK4 and MKK5 to regulate plant immunity.","KEEP ON GOING (KEG)","KEEP ON GOING (KEG)"]
["AT3G20490","turquoise","Involved in DNA repair. Mutants show accumulation of DNA lesions upon genotoxic stress","KNOTEN1 (KNO1)","KNOTEN1 (KNO1)"]
["AT4G32040","turquoise","A member of Class II KN1-like homeodomain transcription factors factors (together with KNAT3 and KNAT4), with greatest homology to the maize knox1 homeobox protein. Regulates photomorphogenic responses and represses late steps in gibberellin biosynthesis. KNAT5 promoter activity showed cell-type specific pattern along longitudinal root axis, primarily in the epidermis of the distal end of primary root elongation zone.","KNOTTED1-LIKE HOMEOBOX GENE 5 (KNAT5)","KNOTTED1-LIKE HOMEOBOX GENE 5 (KNAT5)"]
["AT3G56840","turquoise","Encodes a mitochondrial L-2-hydroxyglutarate (L-2HG) dehydrogenase that contains FAD and converts L-2HG back to 2-ketoglutarate.","L-2-HYDROXYGLUTARATE DEHYDROGENASE (L-2HGDH)","L-2-HYDROXYGLUTARATE DEHYDROGENASE (L-2HGDH)"]
["AT1G01470","turquoise","Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against desiccation.","LATE EMBRYOGENESIS ABUNDANT 14 (LEA14)","LATE EMBRYOGENESIS ABUNDANT 14 (LEA14);LIGHT STRESS-REGULATED 3 (LSR3); (LEA1);ARABIDOPSIS THALIANA LATE EMBRYOGENESIS ABUNDANT 14 (ATLEA14)"]
["AT2G35300","turquoise","Encodes LEA4-2/LEA18, a member of the Late Embryogenesis Abundant (LEA) proteins which typically accumulate in response to low water availability conditions imposed during development or by the environment.","LATE EMBRYOGENESIS ABUNDANT 18 (LEA18)","LATE EMBRYOGENESIS ABUNDANT 18 (LEA18);LATE EMBRYOGENESIS ABUNDANT 4-2 (AtLEA4-2);LATE EMBRYOGENESIS ABUNDANT 4-2 (LEA4-2)"]
["AT3G22500","turquoise","late embryogenesis abundant (LEA) protein","LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP31 (ATECP31)","LATE EMBRYOGENESIS ABUNDANT PROTEIN ECP31 (ATECP31)"]
["AT3G05090","turquoise","Encodes a DCAF protein. Mutants are defective in lateral root development and suggest roles for DDB1-Cul4?mediated protein degradation in regulating auxin accumulation during lateral root primordium development and lateral root meristem emergence.","LATERAL ROOT STIMULATOR 1 (LRS1)","LATERAL ROOT STIMULATOR 1 (LRS1)"]
["AT4G02410","turquoise","Concanavalin A-like lectin protein kinase family protein;(source:Araport11)","L-TYPE LECTIN RECEPTOR KINASE IV.3 (LECRK-IV.3)","LECTIN-LIKE PROTEIN KINASE 1 (LPK1); (ATLPK1);L-TYPE LECTIN RECEPTOR KINASE IV.3 (LECRK-IV.3)"]
["AT5G62990","turquoise","Nucleus-encoded RNA-binding protein which exists only in embryophytes, catalyzes nuclear pre-mRNA and chloroplast group II intron splicing.","EMBRYO DEFECTIVE 1692 (emb1692)","LEFKOTHEA (LEFKO);EMBRYO DEFECTIVE 1692 (emb1692)"]
["AT5G17440","turquoise","LUC7 related protein;(source:Araport11)","LETHAL UNLESS CBC 7 B (LUC7B)","LETHAL UNLESS CBC 7 B (LUC7B)"]
["AT4G32551","turquoise","LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.","LEUNIG (LUG)","LEUNIG (LUG)"]
["AT4G33670","turquoise","Encodes a L-galactose dehydrogenase, involved in ascorbate biosynthesis","L-GALACTOSE DEHYDROGENASE (L-GALDH)","L-GALACTOSE DEHYDROGENASE (L-GALDH)"]
["AT4G00830","turquoise","Encodes a heterogeneous nuclear ribonucleoprotein (hnRNP-Q) that is involved in the plant innate immune response and may function as a suppressor of cell-autonomous immunity.","LHP1-INTERACTING FACTOR 2 (LIF2)","LHP1-INTERACTING FACTOR 2 (LIF2)"]
["AT2G31160","turquoise","LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11)","LIGHT SENSITIVE HYPOCOTYLS 3 (LSH3)","LIGHT SENSITIVE HYPOCOTYLS 3 (LSH3);ORGAN BOUNDARY 1 (OBO1)"]
["AT1G43130","turquoise","like COV 2;(source:Araport11)","LIKE COV 2 (LCV2)","LIKE COV 2 (LCV2)"]
["AT1G07985","turquoise","Protein of unknown function. May function in tethering lipid droplet to the plasma membrane via interaction with SLDP1/2.","LIPID DROPLET PLASMA MEMBRANE ADAPTOR (LIPA)","LIPID DROPLET PLASMA MEMBRANE ADAPTOR (LIPA)"]
["AT3G20480","turquoise","tetraacyldisaccharide 4-kinase family protein;(source:Araport11)","LIPID X K (LPXK)","LIPID X K (LPXK); (ATLPXK)"]
["AT3G17240","turquoise","lipoamide dehydrogenase precursor","LIPOAMIDE DEHYDROGENASE 2 (mtLPD2)","LIPOAMIDE DEHYDROGENASE 2 (mtLPD2)"]
["AT1G68790","turquoise","Member of small gene family in Arabidopsis containing 4 members (LNC1-4 or CRWN 1-4) with redundant functions in protection from oxidative damage, control of nuclear morphology and degradation of ABI5.","LITTLE NUCLEI3 (LINC3)","LITTLE NUCLEI3 (LINC3);CROWDED NUCLEI 3 (CRWN3)"]
["AT2G31280","turquoise","Encodes a LHW-like protein with 80% amino acid identity to LHW.","CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 7 (CPuORF7)","LONESOME HIGHWAY LIKE 2 (LHL2);CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 7 (CPuORF7); (LL2)"]
["AT3G09770","turquoise","Encodes a ubiquitin E3 ligase LOG2 (LOSS OF GDU2). Required for GLUTAMINE DUMPER1(GDU1)-induced amino secretion.","LOSS OF GDU 2 (LOG2)","LOSS OF GDU 2 (LOG2);ABA INSENSITIVE RING PROTEIN 3 (AIRP3); (ATAIRP3)"]
["AT4G36910","turquoise","Encodes a single cystathionine beta-synthase domain-containing protein. Modulates development by regulating the thioredoxin system.","LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2)","LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2 (LEJ2);CYSTATHIONE [BETA]-SYNTHASE DOMAIN-CONTAINING PROTEIN 2 (CDCP2);CBS DOMAIN CONTAINING PROTEIN 1 (CBSX1)"]
["AT2G18915","turquoise","encodes a member of F-box proteins that includes two other proteins in Arabidopsis (ZTL and FKF1). These proteins contain a unique structure containing a PAS domain at their N-terminus, an F-box motif, and 6 kelch repeats at their C-terminus. Overexpression results in arrhythmic phenotypes for a number of circadian clock outputs in both constant light and constant darkness, long hypocotyls under multiple fluences of both red and blue light, and a loss of photoperiodic control of flowering time. Although this the expression of this gene itself is not regulated by circadian clock, it physically interacts with Dof transcription factors that are transcriptionally regulated by circadian rhythm. LKP2 interacts with Di19, CO/COL family proteins.","LOV KELCH PROTEIN 2 (LKP2)","LOV KELCH PROTEIN 2 (LKP2);ADAGIO 2 (ADO2)"]
["AT4G14850","turquoise","Encodes a pentatricopeptide (PPR) protein that binds single-stranded RNA. The N-terminal portion of the protein can localize to the mitochondria. Mutations in this gene make plants less sensitive to inhibitors of the MEP and MVA pathways of isoprenoid biosynthesis and increase the activity of HMG CoA reductase.","LOVASTATIN INSENSITIVE 1 (LOI1)","LOVASTATIN INSENSITIVE 1 (LOI1);MITOCHONDRIAL RNA EDITING FACTOR 11 (MEF11)"]
["AT3G50970","turquoise","Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. LTI29 and LTI30 double overexpressors confer freeze tolerance. Located in membranes. mRNA upregulated by water deprivation and abscisic acid. The mRNA is cell-to-cell mobile.","LOW TEMPERATURE-INDUCED 30 (LTI30)","LOW TEMPERATURE-INDUCED 30 (LTI30); (XERO2)"]
["AT5G63460","turquoise","Enhances ABA response and plant drought tolerance by modulating the stability and localization of c2-domain ABA-related proteins.LOT1 regulates plant tolerance to drought stress by affecting ABA signaling through regulating the stability and dynamic localization of CAR9 (PMID:31102784).","LOWER TEMPERATURE 1 (LOT1)","LOWER TEMPERATURE 1 (LOT1)"]
["AT1G75830","turquoise","Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant defensin (PDF) family with the following members: At1g75830/PDF1.1, At5g44420/PDF1.2a, At2g26020/PDF1.2b, At5g44430/PDF1.2c, At2g26010/PDF1.3, At1g19610/PDF1.4, At1g55010/PDF1.5, At2g02120/PDF2.1, At2g02100/PDF2.2, At2g02130/PDF2.3, At1g61070/PDF2.4, At5g63660/PDF2.5, At2g02140/PDF2.6, At5g38330/PDF3.1 and At4g30070/PDF3.2.","LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 67 (LCR67)","LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 67 (LCR67); (PR12);PLANT DEFENSIN 1.1 (PDF1.1)"]
["AT5G52300","turquoise","Encodes a protein that is induced in expression in response to water deprivation such as cold, high-salt, and desiccation. The response appears to be via abscisic acid. The promoter region contains two ABA-responsive elements (ABREs) that are required for the dehydration-responsive expression of rd29B as cis-acting elements. Protein is a member of a gene family with other members found plants, animals and fungi. Upregulation by P. polymyxa CR1 increases drought resistance.","LOW-TEMPERATURE-INDUCED 65 (LTI65)","LOW-TEMPERATURE-INDUCED 65 (LTI65);RESPONSIVE TO DESICCATION 29B (RD29B)"]
["AT1G15530","turquoise","Concanavalin A-like lectin protein kinase family protein;(source:Araport11)","L-TYPE LECTIN RECEPTOR KINASE S.1 (LECRK-S.1)","L-TYPE LECTIN RECEPTOR KINASE S.1 (LECRK-S.1)"]
["AT2G24330","turquoise","Encodes one of two LUNAPARK proteins in Arabidopsis. Both LNPA and LNPB are predominantly distributed throughout the ER, but not preferentially localized at the three-way junctions. Mutation of both LNPA and LNPB together caused the cortical ER to develop poor ER cisternae and a less dense tubular network. E3 ligase involved in degradation of RHD3 to maintain a tubular ER network.","LUNAPARK1 (LNP1)","LUNAPARK1 (LNP1);LUNAPARK B (LNPB)"]
["AT4G35180","turquoise","LYS/HIS transporter 7;(source:Araport11)","LYS/HIS TRANSPORTER 7 (LHT7)","LYS/HIS TRANSPORTER 7 (LHT7)"]
["AT3G48390","turquoise","MA3 domain-containing protein;(source:Araport11)","MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 4 (MRF4)","MA3 DOMAIN-CONTAINING TRANSLATION REGULATORY FACTOR 4 (MRF4)"]
["AT2G32900","turquoise","Homologous to Drosophila ZW10, a centromere/kinetochore protein involved in chromosome segregation. Member of MAG2 complex on the ER that is responsible for efficient transport of seed storage proteins, functions in protein transport between the ER and Golgi apparatus, contain a Zeste?White 10 (ZW10) domain and a Sec39 domain. Required for proper maturation of seed storage proteins.","(ATZW10)","MAG2 INTERACTING PROTEIN 1 (MIP1); (ATZW10)"]
["AT1G55930","turquoise","Together with MRG8 serves as Mg2+ transporter responsible for chloroplast Mg2+ update.","MAGNESIUM RELEASE 9 (MRG9)","MAGNESIUM RELEASE 9 (MRG9)"]
["AT3G58970","turquoise","Transmembrane magnesium transporter. One of nine family members.","MAGNESIUM TRANSPORTER 6 (MGT6)","MAGNESIUM TRANSPORTER 6 (MGT6); (MRS2-4)"]
["AT5G47480","turquoise","RGPR-related protein; SEC16A homolog. Part of endomembrane trafficking system.","MAIGO 5 (MAG5)","MAIGO 5 (MAG5)"]
["AT1G17930","turquoise","Mobile domain protein involved in silencing of transposable elements. Loss of function affects shoot and root meristem maintenance. Interacts and functions with MAIL1 and PP7L in gene silencing.","MAINTENANCE OF MERISTEMS (MAIN)","MAINTENANCE OF MERISTEMS (MAIN)"]
["AT1G80180","turquoise","Encodes a substrate of the MAPK kinases. Phenotypic analyses of Arabidopsis expressing phosphorylation site mutant forms of At1g80180.1 showed clustered stomata and higher stomatal index in cotyledons expressing the phosphomimetic form of At1g80180.1. Tightly connected with MAPK signaling to fine-tune stomatal production and patterning.","MAPK SUBSTRATES IN THE STOMATAL LINEAGE 1 (MASS1)","MAPK SUBSTRATES IN THE STOMATAL LINEAGE 1 (MASS1)"]
["AT1G15400","turquoise","Tightly connected with MAPK signaling to fine-tune stomatal production and patterning.","MAPK SUBSTRATES IN THE STOMATAL LINEAGE 2 (MASS2)","MAPK SUBSTRATES IN THE STOMATAL LINEAGE 2 (MASS2)"]
["AT2G02955","turquoise","maternal effect embryo arrest 12;(source:Araport11)","MATERNAL EFFECT EMBRYO ARREST 12 (MEE12)","MATERNAL EFFECT EMBRYO ARREST 12 (MEE12);CENTRAL CELL GUIDANCE (CCG)"]
["AT1G02140","turquoise","Encodes a homologue of the exon junction complex (EJC) component MAGO that participates in intron-mediated enhancement of gene expression.","MAGO NASHI (MAGO)","MATERNAL EFFECT EMBRYO ARREST 63 (MEE63);HAPLESS 1 (HAP1);MAGO NASHI (MAGO)"]
["AT3G59350","turquoise","Pti-like protein. Interacts with CLV1 and functions in CLE peptide signaling pathway in root development. Membrane localization is dependent on palmytolation.","MAZZA (MAZ)","MAZZA (MAZ); (CARK5)"]
["AT1G26665","turquoise","Mediator complex, subunit Med10;(source:Araport11)","MEDIATOR 10B (MED10B)","MEDIATOR 10B (MED10B)"]
["AT1G11760","turquoise","Required for expression of CBF-controlled cold-responsive genes. Required for recruitment of the Mediator complex and RNA polymerase II to CBF-controlled cold-responsive genes. MED32 has now been annotated as the MED2 subunit of the Mediator complex. Mediator tail subunit, involved in transcriptional regulation. Mediator Complex Subunit, interacts with MED23, MED5, MED16, and MED23 the Regulation of Phenylpropanoid Biosynthesis.","MEDIATOR 32 (MED32)","MEDIATOR 2 (MED2);MEDIATOR 32 (MED32)"]
["AT5G63480","turquoise","mediator of RNA polymerase II transcription subunit;(source:Araport11)","MEDIATOR 30 (MED30)","MEDIATOR 30 (MED30)"]
["AT5G02850","turquoise","hydroxyproline-rich glycoprotein family protein;(source:Araport11)","MEDIATOR 4 (MED4)","MEDIATOR 4 (MED4)"]
["AT5G07290","turquoise","AML4 A member of mei2-like gene family, predominantly plant-based family of genes encoding RNA binding proteins with characteristic presence of a highly conserved RNA binding motif first described in the mei2 gene of the fission yeast S. pombe. In silico analyses reveal nine mei2 -like genes in A. thaliana. They were grouped into four distinct clades, based on overall sequence similarity and subfamily-specific sequence elements. AML4 is a member of two sister clades of mei2-like gene family, AML1 through AML5, and belongs to the clade named ALM14. AML4 is expressed during embryo development (heart and torpedo stage) and in vegetative and floral apices.","MEI2-LIKE 4 (ML4)","MEI2-LIKE 4 (ML4);MEI2-LIKE 4 (AML4)"]
["AT5G16780","turquoise","Encodes a protein belonging to SART-1 family. The gene is expressed in the basal region of the developing embryo during heart stage. Phenotypic analyses of dot2 mutants suggest that this protein plays a role in root, shoot, and flower development. dot2 mutants are dwarved plants that display an aberrant spurred leaf venation pattern and fail to flower. In the roots DOT2 appears to be require for normal meristem organization and maintenance and the proper expression of PIN and PLT genes.","DEFECTIVELY ORGANIZED TRIBUTARIES 2 (DOT2)","MERISTEM-DEFECTIVE (MDF);DEFECTIVELY ORGANIZED TRIBUTARIES 2 (DOT2)"]
["AT3G09390","turquoise","metallothionein, binds to and detoxifies excess copper and other metals, limiting oxidative damage","METALLOTHIONEIN 2A (MT2A)","METALLOTHIONEIN 2A (MT2A);ARABIDOPSIS THALIANA METALLOTHIONEIN-K (ATMT-K);ARABIDOPSIS THALIANA METALLOTHIONEIN-1 (ATMT-1)"]
["AT3G59990","turquoise","Encodes a MAP2 like methionine aminopeptidase","METHIONINE AMINOPEPTIDASE 2B (MAP2B)","METHIONINE AMINOPEPTIDASE 2B (MAP2B)"]
["AT3G01460","turquoise","Encodes a protein with a methyl-CpG-binding domain. Has sequence similarity to human MBD proteins. Involved in the modification of the FLC chromatin acetylation state to affect FLC expression. Mutants show an early flowering, and enhanced shoot branching phenotypes.","METHYL-CPG-BINDING DOMAIN 9 (MBD9)","METHYL-CPG-BINDING DOMAIN 9 (MBD9); (ATMBD9)"]
["AT1G18500","turquoise","Encodes an active Arabidopsis isopropylmalate synthase IPMS1. Involved in leucine biosynthesis. Do not participate in the chain elongation of glucosinolates. Expressed constitutively throughout the plant. Loss of IPMS1 can be compensated by a second isopropylmalate synthase gene IPMS2 (At1g74040). The mRNA is cell-to-cell mobile.","METHYLTHIOALKYLMALATE SYNTHASE-LIKE 4 (MAML-4)","METHYLTHIOALKYLMALATE SYNTHASE-LIKE 4 (MAML-4);ISOPROPYLMALATE SYNTHASE 1 (IPMS1)"]
["AT5G27540","turquoise","Encodes a protein with similarity to GTPases that is localized to the mitochondrion. Involved in embryogenesis, pollen tube growth and required for mitochondrial development.","MIRO-RELATED GTP-ASE 1 (MIRO1)","MIRO-RELATED GTP-ASE 1 (MIRO1);EMBRYO DEFECTIVE 2473 (emb2473)"]
["AT4G31010","turquoise","Encodes a nuclear CRM protein required for the processing of many mitochondrial introns. It is involved in the biogenesis of respiratory complexes I and IV in Arabidopsis.","MITOCHONDRIAL CAF-LIKE SPLICING FACTOR 1 (MCSF1)","MITOCHONDRIAL CAF-LIKE SPLICING FACTOR 1 (MCSF1)"]
["AT3G18970","turquoise","Encodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing.","MITOCHONDRIAL EDITING FACTOR 20 (MEF20)","MITOCHONDRIAL EDITING FACTOR 20 (MEF20)"]
["AT4G14170","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)","MITOCHONDRIAL EDITING FACTOR 32 (MEF32)","MITOCHONDRIAL EDITING FACTOR 32 (MEF32)"]
["AT5G08305","turquoise","E+-type pentatricopeptide repeat protein involved in C to U editing in mitochondria and chloroplasts.","MITOCHONDRIAL EDITING FACTOR 37 (MEF37)","MITOCHONDRIAL EDITING FACTOR 37 (MEF37)"]
["AT2G25580","turquoise","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","MITOCHONDRIAL EDITING FACTOR 8 (MEF8)","MITOCHONDRIAL EDITING FACTOR 8 (MEF8)"]
["AT5G09590","turquoise","heat shock protein 70 (Hsc70-5); nuclear","MITOCHONDRIAL HSO70 2 (MTHSC70-2)","MITOCHONDRIAL HSO70 2 (MTHSC70-2);HEAT SHOCK PROTEIN 70-10 (HSP70-10);HEAT SHOCK COGNATE (HSC70-5)"]
["AT1G07030","turquoise","Mitochondrial substrate carrier family protein;(source:Araport11)","MITOCHONDRIAL IRON TRANSPORTER 2 (MIT2)","MITOCHONDRIAL IRON TRANSPORTER 2 (MIT2)"]
["AT5G06540","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)","MITOCHONDRIAL RNA EDITING FACTOR 28 (MEF28)","MITOCHONDRIAL RNA EDITING FACTOR 28 (MEF28)"]
["AT4G37170","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)","MITOCHONDRIAL RNA EDITING FACTOR 34 (MEF34)","MITOCHONDRIAL RNA EDITING FACTOR 34 (MEF34)"]
["AT3G45640","turquoise","Encodes a mitogen-activated kinase whose mRNA levels increase in response to touch, cold, salinity stress and chitin oligomers.Also functions in ovule development. Heterozygous MPK3 mutants in a homozygous MPK6 background are female sterile due to defects in integument development. MPK3 can be dephosphorylated by MKP2 in vitro. The mRNA is cell-to-cell mobile.","MITOGEN-ACTIVATED PROTEIN KINASE 3 (MPK3)","MITOGEN-ACTIVATED PROTEIN KINASE 3 (ATMPK3);MITOGEN-ACTIVATED PROTEIN KINASE 3 (MPK3); (ATMAPK3)"]
["AT1G07150","turquoise","Member of MEKK subfamily. Involved in wound induced signaling where it interacts with At5g40440, and activates At1g59580.","MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 13 (MAPKKK13)","MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 13 (MAPKKK13); (MAP3K13)"]
["AT5G49880","turquoise","Encodes a spindle assembly checkpoint protein MAD1. The mRNA is cell-to-cell mobile.","MITOTIC ARREST DEFICIENT 1 (MAD1)","MITOTIC ARREST DEFICIENT 1 (MAD1);NITRIC OXIDE-INDUCED EARLY COTYLEDON SENESCENCE 1 (NES1); (ATMAD1)"]
["AT1G70840","turquoise","MLP-like protein 31;(source:Araport11)","MLP-LIKE PROTEIN 31 (MLP31)","MLP-LIKE PROTEIN 31 (MLP31)"]
["AT4G30870","turquoise","Encodes an Arabidopsis homolog of the endonuclease MSU81. T-DNA insertion lines of AtMSU81 have a deficiency in homologous recombination in somatic cells but only after genotoxic stress. Crosses with a hyperrecombinogenic mutant of the AtRecQ4A helicase resulted in synthetic lethality in the double mutant. Involved in DNA-Protein crosslink (DPC) repair in independent pathways to WSS1A and TDP1.","MMS AND UV SENSITIVE 81 (MUS81)","MMS AND UV SENSITIVE 81 (MUS81);ARABIDOPSIS THALIANA MMS AND UV SENSITIVE 81 (ATMUS81)"]
["AT4G02150","turquoise","Encodes IMPORTIN ALPHA 3. Mutant plants act as suppressors of snc1 response and salicylic acid accumulation. Located in the nucleus. Involved in protein import. Protein interacts with Agrobacterium proteins VirD2 and VirE2. Is not individually essential for Agrobacterium-mediated root transformation, but when overexpressed can rescue the impa-4 decreased transformation susceptibility phenotype.","MODIFIER OF SNC1, 6 (MOS6)","MODIFIER OF SNC1, 6 (MOS6);IMPORTIN ALPHA 3 (ATIMPALPHA3);IMPORTIN ALPHA ISOFORM 3 (IMPA-3)"]
["AT1G02740","turquoise","MRG1 and MRG2 proteins act as readers of H3K4me3/H3K36me3 marked chromatin. They interact with each other as well as several other protein classes, to modulate the activity of flowering genes.","MORF RELATED GENE 2 (MRG2)","MORF RELATED GENE 2 (MRG2)"]
["AT4G02720","turquoise","Encodes an ortholog of NKAP (NF-kB activating protein), that interacts with splicing and ribosome biogenesis proteins, colocalizes with the 45S rDNA at the nucleolar organizer regions (NORs) and negatively regulates 45S rDNA expression.","MORPHOLOGY OF AGO1-52 SUPPRESSED2 (MAS2)","MORPHOLOGY OF AGO1-52 SUPPRESSED2 (MAS2)"]
["AT3G62700","turquoise","member of MRP subfamily","ATP-BINDING CASSETTE C14 (ABCC14)","MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 10 (ATMRP10);MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 10 (MRP10);ATP-BINDING CASSETTE C14 (ABCC14)"]
["AT3G59140","turquoise","member of MRP subfamily","ATP-BINDING CASSETTE C10 (ABCC10)","MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 14 (MRP14);ATP-BINDING CASSETTE C10 (ABCC10);MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 14 (ATMRP14)"]
["AT3G60970","turquoise","member of MRP subfamily","ATP-BINDING CASSETTE C15 (ABCC15)","MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 15 (ATMRP15);MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 15 (MRP15);ATP-BINDING CASSETTE C15 (ABCC15)"]
["AT3G57880","turquoise","Required for maintenance of inflorescence and shoot SAMs and normal development of the derived vascular cambium, functions in the SAM to promote continuous organogenesis, affects SAM development through STM, where it affects intracellular localization of STM in SAM cells in the peripheral region and prevents STM localization toward the cell wall of SAM cells in the peripheral region.","MULTIPLE C2 DOMAIN AND TRANSMEMBRANE REGION PROTEIN 3 (MCTP3)","MULTIPLE C2 DOMAIN AND TRANSMEMBRANE REGION PROTEIN 3 (MCTP3);FT INTERACTING PROTEIN 3 (FTIP3)"]
["AT1G22610","turquoise","C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11)","MULTIPLE C2 DOMAIN AND TRANSMEMBRANE REGION PROTEIN 6 (MCTP6)","MULTIPLE C2 DOMAIN AND TRANSMEMBRANE REGION PROTEIN 6 (MCTP6)"]
["AT4G20020","turquoise","Encodes a protein involved in RNA editing in mitochondria. Member of MORF family consisting of of nine full-length proteins encoded in the nuclear genome. MORF proteins are required for all RNA editing events in plastids and for many, possibly also all, sites in mitochondria. Potential link between the RNA binding PPR protein and the protein contributing the enzymatic activity in RNA editing.","MULTIPLE ORGANELLAR RNA EDITING FACTOR 1 (MORF1)","MULTIPLE ORGANELLAR RNA EDITING FACTOR 1 (MORF1)"]
["AT3G06790","turquoise","Encodes a protein involved in RNA editing in mitochondria. Member of MORF family consisting of of nine full-length proteins encoded in the nuclear genome. MORF proteins are required for all RNA editing events in plastids and for many, possibly also all, sites in mitochondria. Potential link between the RNA binding PPR protein and the protein contributing the enzymatic activity in RNA editing.","MULTIPLE ORGANELLAR RNA EDITING FACTOR 3 (MORF3)","MULTIPLE ORGANELLAR RNA EDITING FACTOR 3 (MORF3)"]
["AT3G58680","turquoise","One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is developmentally regulated. The mRNA is cell-to-cell mobile.","MULTIPROTEIN BRIDGING FACTOR 1B (MBF1B)","MULTIPROTEIN BRIDGING FACTOR 1B (MBF1B);MULTIPROTEIN BRIDGING FACTOR 1B (ATMBF1B)"]
["AT2G30640","turquoise","Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8).","MUSTANG 2 (MUG2)","MUSTANG 2 (MUG2)"]
["AT3G06940","turquoise","Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8).","MUSTANG 5 (MUG5)","MUSTANG 5 (MUG5)"]
["AT5G34853","turquoise","Encodes a member of a domesticated transposable element gene family MUSTANG. Members of this family are derived from transposable elements genes but gained function in plant fitness and flower development. Known members include: AT3G04605 (MUG1), AT2G30640 (MUG2), AT1G06740 (MUG3), AT5G16505 (MUG4), AT3G06940 (MUG5), AT5G48965 (MUG6), AT3G05850 (MUG7) and AT5G34853 (MUG8).","MUSTANG 8 (MUG8)","MUSTANG 8 (MUG8)"]
["AT3G55730","turquoise","putative transcription factor MYB109 (MYB109) mRNA, degraded by the 26S proteasome, likely facilitated by a CUL3-based E3 ligase that uses MATH-BTB/POZ proteins as substrate adaptors","MYB DOMAIN PROTEIN 109 (MYB109)","MYB DOMAIN PROTEIN 109 (MYB109);MYB DOMAIN PROTEIN 109 (AtMYB109)"]
["AT5G02320","turquoise","Encodes a putative c-MYB-like transcription factor of the MYB3R factor gene family (MYB3R5). Member of DREAM complex.","MYB DOMAIN PROTEIN 3R-5 (MYB3R-5)","MYB DOMAIN PROTEIN 3R-5 (MYB3R-5);ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 3R5 (ATMYB3R5)"]
["AT3G18100","turquoise","Member of the R2R3 transcription factor gene family.","MYB DOMAIN PROTEIN 4R1 (MYB4R1)","MYB DOMAIN PROTEIN 4R1 (MYB4R1);MYB DOMAIN PROTEIN 4R1 (AtMYB4R1)"]
["AT3G11440","turquoise","Member of the R2R3-MYB gene family. Similar to GA-induced Barley myb gene. May be induced during germination in response to GA. Double mutants with MYB33 are male sterile, showing defects in pollen development and anther development. Contains a binding site for miRNA159 and may be spatially regulated by this micro RNA. A highly conserved RNA secondary structure abuts the miR159 binding site which facilitates its regulation by miR159. The male sterile phenotype of the MYB33/MYB65 double mutant is light and temperature sensitive. Fertility can be restored with increased light intensity and lower temperatures.","MYB DOMAIN PROTEIN 65 (MYB65)","MYB DOMAIN PROTEIN 65 (ATMYB65);MYB DOMAIN PROTEIN 65 (MYB65)"]
["AT4G37260","turquoise","Member of the R2R3 factor gene family. The mRNA is cell-to-cell mobile.","MYB DOMAIN PROTEIN 73 (MYB73)","MYB DOMAIN PROTEIN 73 (MYB73); (ATMYB73)"]
["AT3G50060","turquoise","Encodes a member of the R2R3 transcription factor gene family. Expressed in response to potassium deprivation and auxin. Involved in lateral root development. Interacts with ARF7 and regulates the expression of some auxin responsive genes.","MYB DOMAIN PROTEIN 77 (MYB77)","MYB DOMAIN PROTEIN 77 (MYB77)"]
["AT3G10550","turquoise","Has 3'-phosphatase activity against both phosphatidylinositol-3,5-bisphosphate (PtdIns3,5P2) and Phosphatidylinositol-3-phosphate (PtdIns3P). The in vitro activity was higher with PtdIns3,5P2 than with PtdIns3P.","MYOTUBULARIN 1 (MTM1)","MYOTUBULARIN 1 (MTM1);ARABIDOPSIS THALIANA MYOTUBULARIN 1 (AtMTM1)"]
["AT5G14180","turquoise","Myzus persicae-induced lipase 1;(source:Araport11)","MYZUS PERSICAE-INDUCED LIPASE 1 (MPL1)","MYZUS PERSICAE-INDUCED LIPASE 1 (MPL1)"]
["AT5G55470","turquoise","member of Sodium proton exchanger family","NA+/H+ (SODIUM HYDROGEN) EXCHANGER 3 (NHX3)","NA+/H+ (SODIUM HYDROGEN) EXCHANGER 3 (NHX3);ARABIDOPSIS THALIANA NA+/H+ (SODIUM HYDROGEN) EXCHANGER 3 (ATNHX3)"]
["AT1G33060","turquoise","NAC 014;(source:Araport11)","NAC 014 (NAC014)","NAC 014 (ANAC014);NAC 014 (NAC014)"]
["AT1G34180","turquoise","NAC domain containing protein 16;(source:Araport11)","NAC DOMAIN CONTAINING PROTEIN 16 (NAC016)","NAC DOMAIN CONTAINING PROTEIN 16 (anac016);NAC DOMAIN CONTAINING PROTEIN 16 (NAC016)"]
["AT1G34190","turquoise","Encodes a NAC domain transcription factor that regulates the mitochondrial retrograde response and coordinates organellar functions and stress responses.","NAC DOMAIN CONTAINING PROTEIN 17 (NAC017)","NAC DOMAIN CONTAINING PROTEIN 17 (anac017);NAC DOMAIN CONTAINING PROTEIN 17 (NAC017);REGULATORS OF AOX1A 2 (RAO2)"]
["AT1G64105","turquoise","NAC domain containing protein 27;(source:Araport11)","NAC DOMAIN CONTAINING PROTEIN 27 (NAC027)","NAC DOMAIN CONTAINING PROTEIN 27 (NAC027);NAC DOMAIN CONTAINING PROTEIN 27 (ANAC027)"]
["AT3G44290","turquoise","Represses sugar-induced ABI5 transcription.","NAC DOMAIN CONTAINING PROTEIN 60 (NAC060)","NAC DOMAIN CONTAINING PROTEIN 60 (anac060);NAC DOMAIN CONTAINING PROTEIN 60 (NAC060); (ANAC60); (NTL5)"]
["AT5G22290","turquoise","Encodes ANAC089, a membrane-tethered transcription factor that negatively regulates floral initiation. Also controls ER-stress-induced programmed cell death.","NAC DOMAIN CONTAINING PROTEIN 89 (NAC089)","NAC DOMAIN CONTAINING PROTEIN 89 (anac089);NTM1-LIKE 14 (NTL14);FRUCTOSE-SENSING QUANTITATIVE TRAIT LOCUS 6 (FSQ6);NAC DOMAIN CONTAINING PROTEIN 89 (NAC089)"]
["AT5G07710","turquoise","Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11)","NAC45/86-DEPENDENT EXONUCLEASE-DOMAIN PROTEIN 1 (NEN1)","NAC45/86-DEPENDENT EXONUCLEASE-DOMAIN PROTEIN 1 (NEN1)"]
["AT5G61390","turquoise","Polynucleotidyl transferase, ribonuclease H-like superfamily protein;(source:Araport11)","NAC45/86-DEPENDENT EXONUCLEASE-DOMAIN PROTEIN 2 (NEN2)","NAC45/86-DEPENDENT EXONUCLEASE-DOMAIN PROTEIN 2 (NEN2)"]
["AT2G22910","turquoise","N-acetyl-l-glutamate synthase 1;(source:Araport11)","N-ACETYL-L-GLUTAMATE SYNTHASE 1 (NAGS1)","N-ACETYL-L-GLUTAMATE SYNTHASE 1 (NAGS1)"]
["AT1G21640","turquoise","Encodes a protein with NAD kinase activity. The protein was also shown to bind calmodulin.","NAD KINASE 2 (NADK2)","NAD KINASE 2 (NADK2)"]
["AT4G05020","turquoise","Miitochondrial alternative NADH dehydrogenase.","NAD(P)H DEHYDROGENASE B2 (NDB2)","NAD(P)H DEHYDROGENASE B2 (NDB2)"]
["AT5G53460","turquoise","NADH-dependent glutamate synthase The mRNA is cell-to-cell mobile.","NADH-DEPENDENT GLUTAMATE SYNTHASE 1 (GLT1)","NADH-DEPENDENT GLUTAMATE SYNTHASE 1 (GLT1)"]
["AT2G16485","turquoise","Encodes NERD (Needed for RDR2-independent DNA methylation), a plant-specific GW repeat- and PHD finger-containing protein involved in siRNA-dependent DNA methylation.","NEEDED FOR RDR2-INDEPENDENT DNA METHYLATION (NERD)","NEEDED FOR RDR2-INDEPENDENT DNA METHYLATION (NERD)"]
["AT1G03470","turquoise","Encodes a member of the NET superfamily of proteins that potentially couples different membranes to the actin cytoskeleton in plant cells. It colocalizes with filamentous actin and is localized to the nuclear membrane and the vacuolar membrane.","NETWORKED 3A (NET3A)","NETWORKED 3A (NET3A)"]
["AT3G51050","turquoise","NERD1 is a single copy locus encoding a protein of unknown function that is localized to the nucleus. Single mutants show defects in root hair growth, root meristem function, cell elongation. NERD1 appears to act synergistically with the exocyst in root development.Expression of primexine synthesis and callose wall deposition-related genes is reduced in mutants and exine formation is affected rendering plants male sterile.","NEW ENHANCER OF ROOT DWARFISM1 (NERD1)","NEW ENHANCER OF ROOT DWARFISM1 (NERD1)"]
["AT4G24690","turquoise","Encodes NBR1, a selective autophagy substrate. The mRNA is cell-to-cell mobile.","NEXT TO BRCA1 GENE 1 (NBR1)","NEXT TO BRCA1 GENE 1 (NBR1);ARABIDOPSIS THALIANA NEXT TO BRCA1 GENE 1 (AtNBR1)"]
["AT3G20970","turquoise","Encodes a protein containing the NFU domain that may be involved in iron-sulfur cluster assembly. Part of a five member gene family, more closely related to NFU5 than to NFU1,2, and 3. Targeted to the mitochondrion.","NFU DOMAIN PROTEIN 4 (NFU4)","NFU DOMAIN PROTEIN 4 (NFU4);ARABIDOPSIS THALIANA NFU DOMAIN PROTEIN 2 (ATNFU2)"]
["AT5G23230","turquoise","nicotinamidase 2;(source:Araport11)","NICOTINAMIDASE 2 (NIC2)","NICOTINAMIDASE 2 (NIC2)"]
["AT1G42470","turquoise","Patched family protein;(source:Araport11)","NIEMANN-PICK DISEASE TYPE C1-1 (ATNPC1 - 1)","NIEMANN-PICK DISEASE TYPE C1-1 (ATNPC1 - 1)"]
["AT3G59580","turquoise","Plant regulator RWP-RK family protein;(source:Araport11)","NIN-LIKE PROTEIN 9 (NLP9)","NIN-LIKE PROTEIN 9 (NLP9)"]
["AT1G69870","turquoise","Encodes a low affinity nitrate transporter NRT1.7. Expressed in phloem. Responsible for source-to-sink remobilization of nitrate. The mRNA is cell-to-cell mobile.","NRT1/ PTR FAMILY 2.13 (NPF2.13)","NITRATE TRANSPORTER 1.7 (NRT1.7); (ATNPF2.13);NRT1/ PTR FAMILY 2.13 (NPF2.13)"]
["AT4G21680","turquoise","Encodes a nitrate transporter (NRT1.8). Functions in nitrate removal from the xylem sap. Mediates cadmium tolerance.","NRT1/ PTR FAMILY 7.2 (NPF7.2)","NITRATE TRANSPORTER 1.8 (NRT1.8);NRT1/ PTR FAMILY 7.2 (NPF7.2); (ATNPF7.2)"]
["AT1G65410","turquoise","Encodes a member of NAP subfamily of transporters. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2.","ATP-BINDING CASSETTE I13 (ABCI13)","NON-INTRINSIC ABC PROTEIN 11 (ATNAP11);TRIGALACTOSYLDIACYLGLYCEROL 3 (TGD3);NON-INTRINSIC ABC PROTEIN 11 (NAP11);ATP-BINDING CASSETTE I13 (ABCI13)"]
["AT5G67030","turquoise","Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.","ABA DEFICIENT 1 (ABA1)","NON-PHOTOCHEMICAL QUENCHING 2 (NPQ2);ZEAXANTHIN EPOXIDASE (ZEP);IMPAIRED IN BABA-INDUCED STERILITY 3 (IBS3);ARABIDOPSIS THALIANA ZEAXANTHIN EPOXIDASE (ATZEP);LOW EXPRESSION OF OSMOTIC STRESS-RESPONSIVE GENES 6 (LOS6);ABA DEFICIENT 1 (ABA1);ARABIDOPSIS THALIANA ABA DEFICIENT 1 (ATABA1)"]
["AT5G20730","turquoise","Encodes an auxin-regulated transcriptional activator. Activates expression of IAA1 and IAA9 in the presence of auxin. Mutants affect blue light and gravitropic and auxin mediated growth responses. Together with AUX19, it is involved in the response to ethylene. In the arf7 arf19 double mutant, several auxin-responsive genes (e.g. IAA5, LBD16, LBD29 and LBD33) are no longer upregulated by auxin.","NON-PHOTOTROPHIC HYPOCOTYL (NPH4)","NON-PHOTOTROPHIC HYPOCOTYL (NPH4);MASSUGU 1 (MSG1);BIPOSTO (BIP);AUXIN RESPONSE FACTOR 7 (ARF7);TRANSPORT INHIBITOR RESPONSE 5 (TIR5);INDOLE-3-ACETIC ACID INDUCIBLE 21 (IAA21)"]
["AT3G03520","turquoise","Lysophosphatidic acid phosphatase highly expressed during phosphate starvation and abiotic stresses. Role in lipid synthesis.","NON-SPECIFIC PHOSPHOLIPASE C3 (NPC3)","NON-SPECIFIC PHOSPHOLIPASE C3 (NPC3)"]
["AT1G68570","turquoise","NPF3.1 is a membrane localized GA transporter that is expressed in the root endodermis.","NRT1/ PTR FAMILY 3.1 (NPF3.1)","NRT1/ PTR FAMILY 3.1 (NPF3.1); (ATNPF3.1)"]
["AT4G37210","turquoise","Encodes a predominantly nuclear histone chaperone that promotes [H3-H4]2 tetrasome formation and does not promote disassembly of in vitro preassembled tetrasomes.","NUCLEAR AUTOANTIGENIC SPERM PROTEIN (NASP)","NUCLEAR AUTOANTIGENIC SPERM PROTEIN (NASP)"]
["AT4G14350","turquoise","AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein;(source:Araport11)","NUCLEAR DBF2-RELATED 1 (NDR1)","NUCLEAR DBF2-RELATED 1 (NDR1)"]
["AT3G45830","turquoise","nuclear factor kappa-B-binding-like protein;(source:Araport11)","NUCLEAR FACTOR KAPPA-B-BINDING-LIKE PROTEIN 1 (NFRKB1)","NUCLEAR FACTOR KAPPA-B-BINDING-LIKE PROTEIN 1 (NFRKB1)"]
["AT1G30500","turquoise","nuclear factor Y, subunit A7;(source:Araport11)","NUCLEAR FACTOR Y, SUBUNIT A7 (NF-YA7)","NUCLEAR FACTOR Y, SUBUNIT A7 (NF-YA7)"]
["AT3G12480","turquoise","nuclear factor Y, subunit C11;(source:Araport11)","NUCLEAR FACTOR Y, SUBUNIT C11 (NF-YC11)","NUCLEAR FACTOR Y, SUBUNIT C11 (NF-YC11)"]
["AT1G79280","turquoise","Encodes a 237-kDA protein with similarity to vertebrate Tpr, a long coiled-coil proteins of nuclear pore inner basket filaments. It is localized to the inner surface of the nuclear envelope and is a component of the nuclear pore-associated steps of sumoylation and mRNA export in plants. Mutations affect flowering time regulation and other developmental processes. Probably acts in the same pathway as ESD4 in affecting flowering time, vegetative and inflorescence development.","NUCLEAR PORE ANCHOR (NUA)","NUCLEAR PORE ANCHOR (NUA)"]
["AT3G57660","turquoise","Encodes a subunit of RNA polymerase I (aka RNA polymerase A). The mRNA is cell-to-cell mobile.","NUCLEAR RNA POLYMERASE A1 (NRPA1)","NUCLEAR RNA POLYMERASE A1 (NRPA1)"]
["AT5G45140","turquoise","Encodes a subunit of RNA polymerase III (aka RNA polymerase C).","NUCLEAR RNA POLYMERASE C2 (NRPC2)","NUCLEAR RNA POLYMERASE C2 (NRPC2)"]
["AT1G17690","turquoise","U3 small nucleolar RNA-associated protein;(source:Araport11)","NUCLEOLAR FACTOR 1 (NOF1)","NUCLEOLAR FACTOR 1 (NOF1)"]
["AT5G50960","turquoise","Highly similar to Saccharomyces cerevisiae NBP35, locus YGL091C. Cytosolic protein that homodimerizes and can assemble both 4Fe-4S - type and 2Fe-2S - type clusters on its amino terminal and carboxy therminal respectively. Null mutants are embryo lethal.","NUCLEOTIDE BINDING PROTEIN 35 (NBP35)","NUCLEOTIDE BINDING PROTEIN 35 (ATNBP35);NUCLEOTIDE BINDING PROTEIN 35 (NBP35)"]
["AT2G06010","turquoise","encodes a novel protein whose expression level is induced in lines overexpressing salicylic-acid (SA)-inducible Arabidopsis DNA binding with one finger (Dof) transcription factor, called OBF-binding protein 3.","OBP3-RESPONSIVE GENE 4 (ORG4)","OBP3-RESPONSIVE GENE 4 (ORG4)"]
["AT5G06960","turquoise","Encodes a basic leucine zipper (B-ZIP) containing protein that interacts with NPR1 to promote expression of salicylic acid induced genes. Binds the ocs-element.","OCS-ELEMENT BINDING FACTOR 5 (OBF5)","OCS-ELEMENT BINDING FACTOR 5 (OBF5);TGACG MOTIF-BINDING FACTOR 5 (TGA5)"]
["AT2G38070","turquoise","OPL2 is a homolog of OPS and also shares overlapping expression and functions. opl2/ops double mutants have more severe delay in protophloem development and additionally defects in metaphloem sieve tube development. OPL2 can functionally compensate for lack of OPS when its expression is driven by the OPS promoter.","OCTOPUS LIKE 2 (OPL2)","OCTOPUS LIKE 2 (OPL2)"]
["AT1G09320","turquoise","Heterochromatin-binding protein which can bind to three H3K9me2 tails. Preferentially binds to long TEs. Required for transcriptional silencing, non-CG DNA methylation, and H3K9 dimethylation at some loci.","AGENET DOMAIN (AGD)-CONTAINING P1 (AGDP1)","ONE AGENET DOMAIN-CONTAINING PROTEIN (ADCP1);AGENET DOMAIN (AGD)-CONTAINING P1 (AGDP1)"]
["AT3G21140","turquoise","Pyridoxamine oxidase located in chloroplast.","ONEIRIC1 (ONE1)","ONEIRIC1 (ONE1)"]
["AT5G50210","turquoise","Encodes an Fe-S binding protein with quinolinate synthase (QS) activity and cysteine desulfurase activator activity. The QS activity was demonstrated by functional complementation of corresponding E. coli mutants and complementation of embryo-lethal phenotypes of the QS homozygous null allele in Arabidopsis. The SufE domain of the protein also stimulates the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. This protein binds a (4Fe-Su)2+ cluster in its NadA domain and is localized in the chloroplast.","QUINOLINATE SYNTHASE (QS)","ONSET OF LEAF DEATH 5 (OLD5);QUINOLINATE SYNTHASE (QS);SULFUR E 3 (SUFE3)"]
["AT3G20660","turquoise","organic cation/carnitine transporter4;(source:Araport11)","ORGANIC CATION/CARNITINE TRANSPORTER4 (OCT4)","ORGANIC CATION/CARNITINE TRANSPORTER4 (AtOCT4);ORGANIC CATION/CARNITINE TRANSPORTER4 (OCT4)"]
["AT5G59420","turquoise","OSBP(oxysterol binding protein)-related protein 3C;(source:Araport11)","OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3C (ORP3C)","OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3C (ORP3C)"]
["AT3G27930","turquoise","Encodes a novel plant-specific beta-barrel protein that likely plays a role in the transport of metabolites and in leaf senescence.","OUTER MEMBRANE 47 (OM47)","OUTER MEMBRANE 47 (OM47); (ATOM47)"]
["AT2G28120","turquoise","Major facilitator superfamily protein;(source:Araport11)","OVARIAN TUMOR DOMAIN (OTU)-CONTAINING DUB (DEUBIQUITILATING ENZYME) 1 (OTU1)","OVARIAN TUMOR DOMAIN (OTU)-CONTAINING DUB (DEUBIQUITILATING ENZYME) 1 (OTU1)"]
["AT4G39870","turquoise","TLD-domain containing nucleolar protein;(source:Araport11)","OXIDATION RESISTANCE 1 (OXR1)","OXIDATION RESISTANCE 1 (OXR1)"]
["AT1G32520","turquoise","TLDc domain protein;(source:Araport11)","OXIDATION RESISTANCE 4 (OXR4)","OXIDATION RESISTANCE 4 (OXR4)"]
["AT4G17410","turquoise","PQT3 is a nuclear localized E3 ligase involved in negative regulation of stress tolerance.PRMT4b is a substrate of PQT3.","PARAQUAT TOLERANCE3 (PQT3)","PARAQUAT TOLERANCE3 (PQT3)"]
["AT2G02710","turquoise","Encodes a putative blue light receptor protein.","PAS/LOV PROTEIN B (PLPB)","PAS/LOV PROTEIN (PLP);PAS/LOV PROTEIN B (PLPB)"]
["AT4G13200","turquoise","Plastoglobular protein which is involved in chloroplast function and thylakoid formation.","PASTOGLOBULAR PROTEIN 18 (PG18)","PASTOGLOBULAR PROTEIN 18 (PG18)"]
["AT3G22270","turquoise","Topoisomerase II-associated protein PAT1;(source:Araport11)","PAT1 HOMOLOG 1 (PAT1H1)","PAT1 HOMOLOG 1 (PAT1H1); (ATPAT1H1); (PATH1)"]
["AT3G54950","turquoise","Encodes pPLAIIIbeta, a member of the Group 3 patatin-related phospholipases. pPLAIIIbeta hydrolyzes phospholipids and galactolipids and additionally has acyl-CoA thioesterase activity. Alterations of pPLAIII&#946; result in changes in lipid levels and composition.","PATATIN-RELATED PHOSPHOLIPASE IIIBETA (pPLAIIIbeta)","PATATIN-LIKE PROTEIN 7 (PLP7);PATATIN-LIKE PROTEIN 6 (PLA IIIA);PATATIN-RELATED PHOSPHOLIPASE IIIBETA (pPLAIIIbeta)"]
["AT1G72560","turquoise","Encodes a karyopherin, specifically the Arabidopsis ortholog of LOS1/XPOT, a protein that mediates nuclear export of tRNAs in yeast and mammals. PSD is capable of rescuing the tRNA export defect of los1 in S. cerevisiae. psd mutants display disrupted initiation of the shoot apical meristem and delay leaf initiation after germination; they also display delayed transition from vegetative to reproductive development.","PAUSED (PSD)","PAUSED (PSD)"]
["AT3G55450","turquoise","PBS1-like 1;(source:Araport11)","PBS1-LIKE 1 (PBL1)","PBS1-LIKE 1 (PBL1)"]
["AT5G02290","turquoise","Encodes a candidate protein kinase NAK that is similar to the oncogenes met and abl.","(NAK)","PBS1-LIKE 11 (PBL11); (NAK)"]
["AT5G15080","turquoise","Receptor-like cytoplasmic kinase involved in CLE and BAM signaling to maintain root meristem homeostasis.","PBS1-LIKE 34 (PBL34)","PBS1-LIKE 34 (PBL34)"]
["AT4G04885","turquoise","Encodes PCFS4 (Pcf11p-similar protein 4), a homolog of yeast polyadenylation factor Protein 1 of Cleavage Factor (Pcf11p). Regulates FCA (AT4G16280) mRNA polyadenylation. Promotes flowering time.","PCF11P-SIMILAR PROTEIN 4 (PCFS4)","PCF11P-SIMILAR PROTEIN 4 (PCFS4)"]
["AT3G16110","turquoise","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. Unlike several other PDI family members, transcript levels for this gene are not up-regulated in response to three different chemical inducers of ER stress (dithiothreitol, beta-mercaptoethanol, and tunicamycin).","PDI-LIKE 1-6 (PDIL1-6)","PDI-LIKE 1-6 (ATPDIL1-6);ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 4 (ATPDI4);PROTEIN DISULFIDE ISOMERASE 4 (PDI4);PDI-LIKE 1-6 (PDIL1-6)"]
["AT3G23020","turquoise","Encodes a chloroplast nucleoid-localized protein whose absence leads to broadly impaired plastid gene expression and chloroplast development.","PENTATRICOPEPTIDE REPEAT (PPR) CONTAINING PROTEIN 30 (PPR30)","PENTATRICOPEPTIDE REPEAT (PPR) CONTAINING PROTEIN 30 (PPR30)"]
["AT2G03380","turquoise","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)","PENTATRICOPEPTIDE REPEAT PROTEIN 96 (PPR96)","PENTATRICOPEPTIDE REPEAT PROTEIN 96 (PPR96)"]
["AT4G26000","turquoise","Encodes a novel Arabidopsis gene encoding a polypeptide with K-homology (KH) RNA-binding modules, which acts on vegetative growth and pistil development. Genetic studies suggest that PEP interacts with element(s) of the CLAVATA signaling pathway.","PEPPER (PEP)","PEPPER (PEP); (ATKH20)"]
["AT3G57190","turquoise","Encodes a chloroplast stroma-localized ribosomal peptide chain release factor that is involved in the light- and stress-dependent regulation of stability of 3' processed petB transcripts to adjust cytochrome b(6) levels. It appears to bind to the 3'-UTR of petB RNA, protecting it from 3'-5' exonucleolytic attack. At-prfB3 arose from a gene duplication of At-prfB1.","PEPTIDE CHAIN RELEASE FACTOR 3 (PrfB3)","PEPTIDE CHAIN RELEASE FACTOR 3 (PrfB3)"]
["AT2G26350","turquoise","Zinc-binding peroxisomal integral membrane protein (PEX10). Inserted directly from the cytosol into peroxisomes and is involved in importing proteins into the peroxisome. Required for embryogenesis.","PEROXIN 10 (PEX10)","PEROXIN 10 (PEX10); (ATPEX10)"]
["AT1G01820","turquoise","member of the peroxin11 (PEX11) gene family, integral to peroxisome membrane, controls peroxisome proliferation.","PEROXIN 11C (PEX11C)","PEROXIN 11C (PEX11C)"]
["AT5G62810","turquoise","mutant has a defect in the intracellular transport of thiolase from the cytosol to glyoxysomes (formerly known as ped2) The mRNA is cell-to-cell mobile.","PEROXIN 14 (PEX14)","PEROXIN 14 (PEX14); (ATPED2);PEROXISOME DEFECTIVE 2 (PED2); (ATPEX14)"]
["AT3G03490","turquoise","Encodes one of two PEX19 peroxin isoforms, a cytosolic chaperone for peroxisome membrane proteins (PMPs) that delivers PMPs to the endoplasmic reticulum or peroxisomal membrane. It is predominantly cytosolic, forms dimers, promotes peroxisome function and is essential for viability. The protein is farnesylated in vivo through the actions of ERA1 and PLP.","PEROXIN 19-1 (PEX19-1)","PEROXIN 19-1 (PEX19-1); (AtPEX19-1); (PEX19A)"]
["AT1G48635","turquoise","peroxin 3;(source:Araport11)","PEROXIN 3 (PEX3)","PEROXIN 3 (PEX3);PEROXIN 3-2 (PEX3-2)"]
["AT1G60740","turquoise","Thioredoxin superfamily protein;(source:Araport11)","PEROXIREDOXIN IID (PRXIID)","PEROXIREDOXIN IID (PRXIID)"]
["AT4G39850","turquoise","Encodes a peroxisomal protein of the ATP binding cassette (ABC) transporter class (PMP subfamily) with significant identity to the human X-linked adrenoleukodystrophy protein (ALDP). The gene product promotes germination and represses embryo dormancy. ABI3, ABA1, FUS3 and LEC1 are epistatic to this gene. Mutants accumulate fatty acyl CoA suggesting a defect in uptake of fatty acyl CoA into the peroxisome.","ATP-BINDING CASSETTE D1 (ABCD1)","PEROXISOMAL ABC TRANSPORTER 1 (PXA1);ATP-BINDING CASSETTE D1 (ABCD1)"]
["AT3G62770","turquoise","Required for autophagosome formation during nutrient deprivation and senescence, promotes pexophagy during seedling development.","AUTOPHAGY 18A (ATG18a)","PEROXISOME UNUSUAL POSITIONING 2 (PEUP2);AUTOPHAGY 18A (AtATG18a);AUTOPHAGY 18A (ATG18a)"]
["AT3G08020","turquoise","Identified as a specific subunit of MINU1/2-associated SWI/SNF complex, aka MAS complex (PMID: 36189880,(PMID:36471048)","TRIPLE PHD FINGERS 2 (TPF2)","PHD DOMAIN-CONTAINING MAS SUBUNIT 2A (PMS2A);TRIPLE PHD FINGERS 2 (TPF2)"]
["AT3G52100","turquoise","RING/FYVE/PHD zinc finger-containing protein. Part of emdomembrane trafficking system. Identified as a specific subunit of MINU1/2-associated SWI/SNF complex, aka MAS complex (PMID: 36189880,(PMID:36471048).","TRIPLE PHD FINGERS 1 (TPF1)","PHD DOMAIN-CONTAINING MAS SUBUNIT 2B (PMS2B);TRIPLE PHD FINGERS 1 (TPF1)"]
["AT3G61060","turquoise","Pholem protein of unknown function. Expression is photoperiod like but not under canonical control, may reflect nutrient status. Mutants grown in long days (16 H) show early senescence and fertility defects.","PHLOEM PROTEIN 2-A13 (PP2-A13)","PHLOEM PROTEIN 2-A13 (AtPP2-A13);PHLOEM PROTEIN 2-A13 (PP2-A13)"]
["AT3G53000","turquoise","phloem protein 2-A15;(source:Araport11)","PHLOEM PROTEIN 2-A15 (PP2-A15)","PHLOEM PROTEIN 2-A15 (PP2-A15);PHLOEM PROTEIN 2-A15 (AtPP2-A15)"]
["AT5G42870","turquoise","The PAH2 gene encodes a phosphatidate phosphohydrolase. Mutant analysis revealed its involvement in galactolipid synthesis pathway, and the membrane lipid remodeling. The pah1pah2 double-mutant showed enhanced Al-susceptibility under low-P conditions, but there was no significant differences in Al tolerance between pah1pah2 and wild type when they were grown in a solution containing 35 &#956;M Pi.","PHOSPHATIDIC ACID PHOSPHOHYDROLASE 2 (PAH2)","PHOSPHATIDIC ACID PHOSPHOHYDROLASE 2 (PAH2);PHOSPHATIDIC ACID PHOSPHOHYDROLASE 2 (ATPAH2)"]
["AT5G47810","turquoise","phosphofructokinase 2;(source:Araport11)","PHOSPHOFRUCTOKINASE 2 (PFK2)","PHOSPHOFRUCTOKINASE 2 (PFK2)"]
["AT2G44530","turquoise","Phosphoribosyltransferase family protein;(source:Araport11)","PHOSPHORIBOSYL DIPHOSPHATE SYNTHASE 5 (PRS5)","PHOSPHORIBOSYL DIPHOSPHATE SYNTHASE 5 (PRS5); (ATPRS5)"]
["AT2G20400","turquoise","MYB-CC transcription factor. PHL4 is related to PHR1 (which regulates plant Pi starvation response) but it does not seem to have a significant role in Pi starvation.","PHR1-LIKE 4 (PHL4)","PHR1-LIKE 4 (PHL4)"]
["AT1G25540","turquoise","Encodes a nuclear protein that acts in a phyB pathway (but downstream of phyB) and induces flowering in response to suboptimal light conditions. PFT1 promotes flowering in CO dependent and independent pathways and integrates several environmental stimuli, such as light quality and JA-dependent defenses. Mutants are hypo-responsive to far-red and hyper-responsive to red light and flower late under long day conditions. Also shown to be a Mediator subunit regulating jasmonate-dependent defense.","PHYTOCHROME AND FLOWERING TIME 1 (PFT1)","PHYTOCHROME AND FLOWERING TIME 1 (PFT1);MEDIATOR 25 (MED25)"]
["AT4G16250","turquoise","Encodes a phytochrome photoreceptor with a function similar to that of phyB that absorbs the red/far-red part of the light spectrum and is involved in light responses. It cannot compensate for phyB loss in Arabidopsis but can substitute for tobacco phyB in vivo.","PHYTOCHROME D (PHYD)","PHYTOCHROME D (PHYD)"]
["AT1G72390","turquoise","nuclear receptor coactivator;(source:Araport11)","PHYTOCHROME-DEPENDENT LATE-FLOWERING (PHL)","PHYTOCHROME-DEPENDENT LATE-FLOWERING (PHL)"]
["AT2G02220","turquoise","Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ). Contains dual guanylate cyclase and kinase catalytic activities that operate in vivo.","PHYTOSULFOKIN RECEPTOR 1 (PSKR1)","PHYTOSULFOKIN RECEPTOR 1 (ATPSKR1);PHYTOSULFOKIN RECEPTOR 1 (PSKR1)"]
["AT2G01190","turquoise","Octicosapeptide/Phox/Bem1p family protein;(source:Araport11)","PIGMENT DEFECTIVE 331 (PDE331)","PIGMENT DEFECTIVE 331 (PDE331)"]
["AT2G26510","turquoise","Encodes a plasma-membrane localized nucleobase transporter capable of transporting adenine, guanine, uracil and hypoxanthine. Likely to be a proton-nucleobase symporter.","PIGMENT DEFECTIVE EMBRYO 135 (PDE135)","PIGMENT DEFECTIVE EMBRYO 135 (PDE135);NUCLEOBASE ASCORBATE TRANSPORTER 3 (NAT3)"]
["AT2G40930","turquoise","Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation.","UBIQUITIN-SPECIFIC PROTEASE 5 (UBP5)","PIGMENT DEFECTIVE EMBRYO 323 (PDE323);UBIQUITIN-SPECIFIC PROTEASE 5 (UBP5); (ATUBP5)"]
["AT1G76520","turquoise","Auxin transport facilitator which abundance is controlled by ER stress, resulting in protein turnover in a tissue-dependent manner. This process allows for the integration of environmental input with phytochrome auxin signaling, contributing to stress-induced growth adaptation.","PIN-LIKES 3 (PILS3)","PIN-LIKES 3 (PILS3)"]
["AT1G12970","turquoise","Encodes PIRL3, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.","PLANT INTRACELLULAR RAS GROUP-RELATED LRR 3 (PIRL3)","PLANT INTRACELLULAR RAS GROUP-RELATED LRR 3 (PIRL3)"]
["AT4G26050","turquoise","Encodes PIRL8, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction. The mRNA is cell-to-cell mobile.","PLANT INTRACELLULAR RAS GROUP-RELATED LRR 8 (PIRL8)","PLANT INTRACELLULAR RAS GROUP-RELATED LRR 8 (PIRL8); (CMF6)"]
["AT3G11330","turquoise","Encodes PIRL9, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction. PIRL1 (AT5G05850) and PIRL9 (AT3G11330) are genetically redundant and are required for differentiation of microspores into pollen.","PLANT INTRACELLULAR RAS GROUP-RELATED LRR 9 (PIRL9)","PLANT INTRACELLULAR RAS GROUP-RELATED LRR 9 (PIRL9)"]
["AT3G46510","turquoise","Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29. Involved in ubiquitination of pattern recognition receptor FLS2.","PLANT U-BOX 13 (PUB13)","PLANT U-BOX 13 (PUB13);ARABIDOPSIS THALIANA PLANT U-BOX 13 (ATPUB13)"]
["AT1G29340","turquoise","Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity. It is required for cell death and full resistance specified by Arabidopsis RPM1 and RPS4 resistance proteins against Pseudomonas syringae pv tomato. The mRNA is cell-to-cell mobile.","PLANT U-BOX 17 (PUB17)","PLANT U-BOX 17 (PUB17);ARABIDOPSIS THALIANA PLANT U-BOX 17 (ATPUB17)"]
["AT5G62560","turquoise","Plant U-box type E3 ubiquitin ligase (PUB).","PLANT U-BOX 41 (PUB41)","PLANT U-BOX 41 (PUB41)"]
["AT5G67530","turquoise","Plant U-box type E3 ubiquitin ligase (PUB).","PLANT U-BOX 49 (PUB49)","PLANT U-BOX 49 (PUB49);PLANT U-BOX 49 (ATPUB49)"]
["AT4G36650","turquoise","Encodes a protein with similarity to the general transcription factor TFIIB. pBRP binds rDNA sequences in vitro. pBRP has been localized to the outer face of the plastid membrane with GFP fusion however, under conditions of proteosome inhibition it is found in the nucleus.","PLANT-SPECIFIC TFIIB-RELATED PROTEIN (PBRP)","PLANT-SPECIFIC TFIIB-RELATED PROTEIN (ATPBRP);PLANT-SPECIFIC TFIIB-RELATED PROTEIN (PBRP)"]
["AT5G20610","turquoise","Encodes a member of a plant specific C2 domain containing gene family. Along with PMI, it appears to be involved in chloroplast and nuclear relocation in response to light.","PLASTID MOVEMENT IMPAIRED1-RELATED1 (PMIR1)","PLASTID MOVEMENT IMPAIRED1-RELATED1 (PMIR1)"]
["AT5G65510","turquoise","Encodes one of three PLETHORA transcription factors required to maintain high levels of PIN1 expression at the periphery of the meristem and modulate local auxin production in the central region of the SAM which underlies phyllotactic transitions.","AINTEGUMENTA-LIKE 7 (AIL7)","PLETHORA 7 (PLT7);AINTEGUMENTA-LIKE 7 (AIL7)"]
["AT4G35540","turquoise","Encodes a novel plant-specific TFIIB-related protein that can interact with TBP2 and bind DNA. It can also form a homodimer and interact with the subunits of RNA polymerases. Mutant pollen fails to germinate.","POLLEN-EXPRESSED TRANSCRIPTION FACTOR 2 (PTF2)","POLLEN-EXPRESSED TRANSCRIPTION FACTOR 2 (PTF2)"]
["AT1G17980","turquoise","Encodes a poly(A) polymerase. Located in the nucleus. It limits founder-cell recruitment to organ primordia and suppresses the salicylic acid-independent immune response downstream of EDS1/PAD4. It also mediates pollen maturation by regulating sperm cell differentiation.","POLY(A) POLYMERASE 1 (PAPS1)","POLY(A) POLYMERASE 1 (PAPS1)"]
["AT4G32850","turquoise","Encodes a nuclear poly(A) polymerase. Located in the nucleus. The mRNA is cell-to-cell mobile.","NUCLEAR POLY(A) POLYMERASE (nPAP)","POLY(A) POLYMERASE 4 (PAPS4);NUCLEAR POLY(A) POLYMERASE (nPAP)"]
["AT3G20540","turquoise","Encodes an organellar DNA polymerase I that is also involved in double strand break repair.","POLYMERASE GAMMA 1 (POLGAMMA1)","POLYMERASE I B (PolIB);POLYMERASE GAMMA 1 (POLGAMMA1)"]
["AT4G05320","turquoise","One of five polyubiquitin genes in A. thaliana. These genes encode the highly conserved 76-amino acid protein ubiquitin that is covalently attached to substrate proteins targeting most for degradation. Polyubiquitin genes are characterized by the presence of tandem repeats of the 228 bp that encode a ubiquitin monomer. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. The mRNA is cell-to-cell mobile.","POLYUBIQUITIN 10 (UBQ10)","POLYUBIQUITIN 10 (UBQ10);UBIQUITIN 10 (UBI10)"]
["AT4G02460","turquoise","Encodes a protein similar to PMS1 in yeast, a member of the family of eukaryotic MutL homologs. The protein appears to play a role in DNA mismatch repair and in the suppression of somatic homeologous recombination.","POSTMEIOTIC SEGREGATION 1 (PMS1)","POSTMEIOTIC SEGREGATION 1 (PMS1); (ATPMS1)"]
["AT3G52250","turquoise","Encodes a protein with a putative role in mRNA splicing. The mRNA is cell-to-cell mobile.","POWERDRESS (PWR)","POWERDRESS (PWR)"]
["AT1G32530","turquoise","RING/U-box superfamily protein;(source:Araport11)","PP2CA INTERACTING RING FINGER PROTEIN 2 (PIR2)","PP2CA INTERACTING RING FINGER PROTEIN 2 (PIR2)"]
["AT1G44910","turquoise","Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries.","PRE-MRNA-PROCESSING PROTEIN 40A (PRP40A)","PRE-MRNA-PROCESSING PROTEIN 40A (PRP40A);PRE-MRNA-PROCESSING PROTEIN 40A (ATPRP40A)"]
["AT3G19670","turquoise","Binds the carboxyl-terminal domain (CTD) of the largest subunit of RNA polymerase II and functions as a scaffold for RNA processing machineries. Ubiquitously expressed and localize to the nucleus.","PRE-MRNA-PROCESSING PROTEIN 40B (PRP40B)","PRE-MRNA-PROCESSING PROTEIN 40B (ATPRP40B);PRE-MRNA-PROCESSING PROTEIN 40B (PRP40B)"]
["AT1G55190","turquoise","PRA1 (Prenylated rab acceptor) family protein;(source:Araport11)","(PRA7)","PRENYLATED RAB ACCEPTOR 1.F2 (PRA1.F2); (PRA7)"]
["AT4G28510","turquoise","prohibitin 1 (Atphb1)","PROHIBITIN 1 (PHB1)","PROHIBITIN 1 (ATPHB1);PROHIBITIN 1 (PHB1)"]
["AT2G14260","turquoise","Dual-targeted prolyl aminopeptidase involved in proline accumulation in response to stress and during pollen development.","PROLINE IMINOPEPTIDASE (PIP)","PROLINE IMINOPEPTIDASE (PIP);PROLYL AMINOPEPTIDASE 1 (PAP1)"]
["AT3G13330","turquoise","Encodes a protein that interacts with the 26S proteasome. Mutants are phenotypically indistinguishable from wild type plants under a variety of growth conditions. Protein levels increase upon exposure of seedlings to MG132, a specific, potent, reversible, and cell-permeable proteasome inhibitor.","PROTEASOME ACTIVATING PROTEIN 200 (PA200)","PROTEASOME ACTIVATING PROTEIN 200 (PA200)"]
["AT3G53970","turquoise","PTRE1 was identified as homologous to human PI31. It has a conserved proline-rich domain at the C-terminus and a highly conserved FP (Fbxo7/PI31) dimerization domain at the N-terminus as well as some novel, conserved domains found only in plants. It regulates auxin signaling possibly via its proteosome suppressing activity.","PROTEASOME REGULATOR1 (PTRE1)","PROTEASOME REGULATOR1 (PTRE1)"]
["AT4G32190","turquoise","Encodes a plastid-located coiled coil-containing protein that is required for normal starch granule initiation in Arabidopsis chloroplasts. Mutants lacking MRC have fewer starch granules per chloroplast than the wild type. Interacts with PTST2 (At1g27070), which is also required for normal starch granule initiation (DOI:10.1105/tpc.18.00219).","PROTEIN INVOLVED IN STARCH INITIATION (PII1)","PROTEIN INVOLVED IN STARCH INITIATION (PII1)"]
["AT2G33700","turquoise","Encodes a putative protein phosphatase 2C that positively regulates salt tolerance in abscisic acid-dependent manner.","PROTEIN PHOSPHATASE 2C G GROUP 1 (PP2CG1)","PROTEIN PHOSPHATASE 2C G GROUP 1 (PP2CG1)"]
["AT5G10900","turquoise","PP7-type family member. Mutants display defects in chloroplast biogenesis and mersitem maintenance. Interacts with MAIL1 and MAIN to regulate gene expression and TE gene silencing.","PROTEIN PHOSPHATASE 7-LIKE (PP7L)","PROTEIN PHOSPHATASE 7-LIKE (PP7L)"]
["AT1G27070","turquoise","Encodes a chloroplast-localized CBM48-containing protein that is involved in starch granule initiation. PTST2 delivers suitable oligosaccharide substrates to starch synthase 4 (SS4). Mutants lacking PTST2 have fewer starch granules in leaf chloroplasts than the wild type. PTST2 is the Arabidopsis ortholog of the rice FLO6 protein.","PROTEIN TARGETING TO STARCH 2 (PTST2)","PROTEIN TARGETING TO STARCH 2 (PTST2)"]
["AT2G35680","turquoise","Encodes a phosphatidylglycerophosphate (PGP) phosphatase involved in the synthesis of plastidial Phosphatidylglycerol (PG) in conjunction with PGPP1 and PTPMT2 in root. PTPMT1 levels were higher in node, cauline leaf, and flower than in root, leaf, and stem.","PROTEIN TYROSINE PHOSPHATASE LOCALIZED TO MITOCHONDRION 1 (PTPMT1)","PROTEIN TYROSINE PHOSPHATASE LOCALIZED TO MITOCHONDRION 1 (PTPMT1)"]
["AT3G24800","turquoise","Contains two ring finger domains and one ZZ domain. Weak similarity to yeast Rad18p. Putative component of the N-end rule pathway (ubiquitin-dependent proteolysis) that is involved in the response to pathogens.","PROTEOLYSIS 1 (PRT1)","PROTEOLYSIS 1 (PRT1)"]
["AT3G21295","turquoise","Pro-Trp-Pro-Trp repeat protein.","PRO-TRP-PRO-TRP PROTEIN 3 (PWWP3)","PRO-TRP-PRO-TRP PROTEIN 3 (PWWP3)"]
["AT4G00760","turquoise","Encodes a response-regulator like protein.","PSEUDO-RESPONSE REGULATOR 8 (APRR8)","PSEUDO-RESPONSE REGULATOR 8 (APRR8);PSEUDO-RESPONSE REGULATOR 8 (PRR8)"]
["AT1G50510","turquoise","5'-pseudouridine monophosphate Glycosylase (PUMY) that hydrolyzes 5'-pseudouridine monophosphate to uracil and ribose-5-phosphate. Acts together with the a pseudouridine kinase PUKI in the peroxisome to prevent toxic pseudouridine monophosphate accumulation.","PSEUDOURIDINE MONOPHOSPHATE GLYCOSYLASE (PUMY)","PSEUDOURIDINE MONOPHOSPHATE GLYCOSYLASE (PUMY)"]
["AT2G29200","turquoise","Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.","PUMILIO 1 (PUM1)","PUMILIO 1 (APUM1);PUMILIO 1 (PUM1)"]
["AT2G29140","turquoise","Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts. The mRNA is cell-to-cell mobile.","PUMILIO 3 (PUM3)","PUMILIO 3 (APUM3);PUMILIO 3 (PUM3)"]
["AT4G18210","turquoise","Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane. The mRNA is cell-to-cell mobile.","PURINE PERMEASE 10 (PUP10)","PURINE PERMEASE 10 (ATPUP10);PURINE PERMEASE 10 (PUP10)"]
["AT1G77720","turquoise","Encodes a predicted protein kinase based on sequence similarity.","PUTATIVE PROTEIN KINASE 1 (PPK1)","PUTATIVE PROTEIN KINASE 1 (PPK1)"]
["AT3G17410","turquoise","Positively regulates ABA-mediated physiological responses via phosphorylation on RCAR3/ RCAR11; forms homo- or heterodimers in a kinase active dependent manner.","PUTATIVE RECEPTOR-LIKE CYTOPLASMIC KINASE 1 (CARK1)","PUTATIVE RECEPTOR-LIKE CYTOPLASMIC KINASE 1 (CARK1)"]
["AT5G27650","turquoise","PWWP domain protein involved in regulation of FLC and flowering time.","PWWP DOMAIN PROTEIN 1 (PDP1)","PWWP DOMAIN PROTEIN 1 (PDP1)"]
["AT3G09670","turquoise","PWWP domain protein involved in regulation of FLC and flowering time.","PWWP DOMAIN PROTEIN 2 (PDP2)","PWWP DOMAIN PROTEIN 2 (PDP2)"]
["AT5G40340","turquoise","PWWP domain protein involved in regulation of FLC and flowering time.","PWWP DOMAIN PROTEIN 3 (PDP3)","PWWP DOMAIN PROTEIN 3 (PDP3)"]
["AT3G03140","turquoise","Encodes a chromatin-associated protein that interacts with plant nuclear lamin-like components to regulate nuclear size.","PWWP-DOMAIN INTERACTOR OF POLYCOMBS1 (PWO1)","PWWP-DOMAIN INTERACTOR OF POLYCOMBS1 (PWO1);PRO-TRP-PRO-TRP PROTEIN 1 (PWWP1)"]
["AT5G45860","turquoise","Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.","PYR1-LIKE 11 (PYL11)","PYR1-LIKE 11 (PYL11);REGULATORY COMPONENTS OF ABA RECEPTOR 5 (RCAR5)"]
["AT4G21800","turquoise","Encodes QQT2. Required for early embryo development. qqt1 mutant lines are embryo-defective. Participates in the organization of microtubules during cell division. Interacts with QQT1 (encoded by AT5G22370).","QUATRE-QUART2 (QQT2)","QUATRE-QUART2 (QQT2); (GPN1)"]
["AT3G06540","turquoise","Encodes a cytoplasmic Rab escort protein that preferentially binds the GDP-bound form of Rab and stimulates geranylgeranylation of various Rab GTPases in Arabidopsis extracts in vitro.","RAB ESCORT PROTEIN (REP)","RAB ESCORT PROTEIN (REP); (AthREP)"]
["AT3G15060","turquoise","RAB GTPase homolog A1G;(source:Araport11)","RAB GTPASE HOMOLOG A1G (RABA1g)","RAB GTPASE HOMOLOG A1G (AtRABA1g);RAB GTPASE HOMOLOG A1G (RABA1g)"]
["AT5G65270","turquoise","RAB GTPase homolog A4A;(source:Araport11)","RAB GTPASE HOMOLOG A4A (RABA4a)","RAB GTPASE HOMOLOG A4A (RABA4a);RAB GTPASE HOMOLOG A4A (AtRABA4a)"]
["AT5G64990","turquoise","RAB GTPase homolog H1A;(source:Araport11)","RAB GTPASE HOMOLOG H1A (RABH1a)","RAB GTPASE HOMOLOG H1A (RABH1a)"]
["AT4G39890","turquoise","RAB GTPase homolog H1C;(source:Araport11)","RAB GTPASE HOMOLOG H1C (RABH1c)","RAB GTPASE HOMOLOG H1C (AtRABH1c);RAB GTPASE HOMOLOG H1C (RABH1c)"]
["AT4G15475","turquoise","Contributes to UV tolerance through nucleotide excision repair.","RADIATION SENSITIVE 7B (RAD7B)","RADIATION SENSITIVE 7B (RAD7B)"]
["AT1G32230","turquoise","Encodes a protein belonging to the (ADP-ribosyl)transferase domain-containing subfamily of WWE protein-protein interaction domain protein family. Superoxide radicals are necessary and sufficient to propagate cell death or lesion formation in rcd1 mutants. Without stress treatment, RCD1 is localized in the nucleus. Under high salt or oxidative stress, RCD1 is found not only in the nucleus but also in the cytoplasm. The mRNA is cell-to-cell mobile.","RADICAL-INDUCED CELL DEATH1 (RCD1)","RADICAL-INDUCED CELL DEATH1 (RCD1); (CEO); (CEO1);ARABIDOPSIS THALIANA P8 (INTERACTING PROTEIN) (ATP8); (AtRCD1);REDOX IMBALANCED 1 (RIMB1)"]
["AT4G31170","turquoise","Protein kinase superfamily protein;(source:Araport11)","RAF-LIKE MAPKKK 28 (RAF28)","RAF-LIKE MAPKKK 28 (RAF28)"]
["AT5G58590","turquoise","Encodes a Ran-binding protein 1 homolog (RanBP1).","RAN BINDING PROTEIN 1 (RANBP1)","RAN BINDING PROTEIN 1 (RANBP1)"]
["AT5G60870","turquoise","Encodes a mitochondrial protein RUG3 that is required for accumulation of mitochondrial respiratory chain complex I. RUG3 is related to human REGULATOR OF CHROMOSOME CONDENSATION 1 (RCC1) and Arabidopsis UV-B RESISTANCE 8 (UVR8).","RCC1/UVR8/GEF-LIKE 3 (RUG3)","RCC1/UVR8/GEF-LIKE 3 (RUG3)"]
["AT2G37710","turquoise","Induced in response to Salicylic acid. The mRNA is cell-to-cell mobile.","L-TYPE LECTIN RECEPTOR KINASE IV.1 (LECRK-IV.1)","RECEPTOR LECTIN KINASE (RLK);L-TYPE LECTIN RECEPTOR KINASE IV.1 (LECRK-IV.1)"]
["AT1G07390","turquoise","receptor like protein 1;(source:Araport11)","RECEPTOR LIKE PROTEIN 1 (RLP1)","RECEPTOR LIKE PROTEIN 1 (AtRLP1);RECEPTOR LIKE PROTEIN 1 (RLP1)"]
["AT1G67500","turquoise","Encodes the catalytic subunit of DNA polymerase zeta.Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).","RECOVERY PROTEIN 3 (REV3)","RECOVERY PROTEIN 3 (REV3)"]
["AT2G44950","turquoise","The gene encodes one of two orthologous E3 ubiquitin ligases in Arabidopsis that are involved in monoubiquitination of histone H2B. Regulates expression of disease resistance genes.","HISTONE MONO-UBIQUITINATION 1 (HUB1)","REDUCED DORMANCY 4 (RDO4);HISTONE MONO-UBIQUITINATION 1 (HUB1)"]
["AT4G11040","turquoise","Encodes a nuclear localized protein with sequence similarity to PP2C phosphatases that is involved in seed dormancy. Loss of function mutations have reduced seed dormancy but does not act through ABA or DOG1 pathways. Lacks several conserved key residues and does not possess any appreciable phosphatase activity in in vitro assays. QTL allele with a nonsynonymous amino acid change confers seed dormancy phenotype.","REDUCED DORMANCY 5 (RDO5)","REDUCED DORMANCY 5 (RDO5);DELAY OF GERMINATION 18 (DOG18)"]
["AT4G04340","turquoise","Encodes a plasma membrane localized hyperosmolality gated calcium channel that is expressed in guard cells and roots.","REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 1.1 (OSCA1.1)","REDUCED HYPEROSMOLALITY, INDUCED CA2+ INCREASE 1 (OSCA1) (osca1);REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 1.1 (OSCA1.1)"]
["AT3G01100","turquoise","unknown protein, has cDNAs and ESTs associated to it","REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 2.3 (OSCA2.3)","REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 2.3 (OSCA2.3)"]
["AT5G25060","turquoise","Part of SWAP1-SFPS-RRC1 splicing factor complex which modulates pre-mRNA splicing to promote photomorphogenesis.","REDUCED RED-LIGHT RESPONSES IN CRY1CRY2 BACKGROUND 1 (RRC1)","REDUCED RED-LIGHT RESPONSES IN CRY1CRY2 BACKGROUND 1 (RRC1)"]
["AT3G06550","turquoise","Encodes a homolog of the protein Cas1p known to be involved in polysaccharide O-acetylation in Cryptococcus neoformans. Mutants show reduced cell wall polysaccharide acetylation and increased resistance to Botrytis cinerea. The protein is expressed in the Golgi and is involved in the acetylation of xylan during secondary wall biosynthesis.","REDUCED WALL ACETYLATION 2 (RWA2)","REDUCED WALL ACETYLATION 2 (RWA2)"]
["AT5G01720","turquoise","RAE1 is an F-box protein component of a SCF-type E3 ligase complex. It is part of an alumium induced regulatory loop: its activity is induced by STOP1 and it in turn ubiquitinates STOP1 which is then targeted for degradation.","REGULATION OF ATALMT1 EXPRESSION 1 (RAE1)","REGULATION OF ATALMT1 EXPRESSION 1 (RAE1)"]
["AT1G20920","turquoise","DEAD-box helicase involved in RNA splicing and miRNA biogenesis.","REGULATOR OF CBF GENE EXPRESSION 1 (RCF1)","REGULATOR OF CBF GENE EXPRESSION 1 (RCF1)"]
["AT1G79950","turquoise","Encodes a homologue of human Regulator of Telomere Elongation Helicase1 (RTEL1). Plays a central role in the preservation of genome stability.","REGULATOR OF TELOMERE ELONGATION HELICASE1 (RTEL1)","REGULATOR OF TELOMERE ELONGATION HELICASE1 (RTEL1)"]
["AT4G29040","turquoise","RPT2a encodes the 26S proteasome subunit. It is required for root meristem maintenance, and regulates gametogenesis. RPT2a is also shown to regulate gene silencing via DNA methylation.","REGULATORY PARTICLE AAA-ATPASE 2A (RPT2a)","REGULATORY PARTICLE AAA-ATPASE 2A (RPT2a)"]
["AT4G38630","turquoise","Regulatory particle non-ATPase subunit of the 26S proteasome with multiubiquitin-chain-binding capabilities","REGULATORY PARTICLE NON-ATPASE 10 (RPN10)","REGULATORY PARTICLE NON-ATPASE 10 (RPN10);MULTIUBIQUITIN-CHAIN-BINDING PROTEIN 1 (MCB1); (ATMCB1);MULTIUBIQUITIN CHAIN BINDING PROTEIN 1 (MBP1)"]
["AT5G58290","turquoise","26S proteasome AAA-ATPase subunit RPT3 (RPT3) mRNA,","REGULATORY PARTICLE TRIPLE-A ATPASE 3 (RPT3)","REGULATORY PARTICLE TRIPLE-A ATPASE 3 (RPT3)"]
["AT3G14050","turquoise","Involved in the maintenance of the (p)ppGp level to accustom plastidial gene expression to darkness.","RELA/SPOT HOMOLOG 2 (RSH2)","RELA/SPOT HOMOLOG 2 (RSH2);RELA-SPOT HOMOLOG 2 (AT-RSH2);RELA/SPOT HOMOLOG 2 (ATRSH2)"]
["AT1G46768","turquoise","encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.1). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.9 and RAP2.10.","RELATED TO AP2 1 (RAP2.1)","RELATED TO AP2 1 (RAP2.1)"]
["AT4G36900","turquoise","Encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.10). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.9 and RAP2.1.","RELATED TO AP2 10 (RAP2.10)","RELATED TO AP2 10 (RAP2.10);DREB AND EAR MOTIF PROTEIN 4 (DEAR4)"]
["AT1G53910","turquoise","Encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. Involved in oxygen sensing. It plays a key role in controlling root bending in response to hypoxia.","RELATED TO AP2 12 (RAP2.12)","RELATED TO AP2 12 (RAP2.12);ETHYLENE RESPONSE FACTOR 74 (ERF74)"]
["AT3G16770","turquoise","Encodes a member of the ERF (ethylene response factor) subfamily B-2 of the plant specific ERF/AP2 transcription factor family (RAP2.3). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.It is localized to the nucleus and acts as a transcriptional activator through the GCC-box. It has been identified as a suppressor of Bax-induced cell death by functional screening in yeast and can also suppress Bax-induced cell death in tobacco plants. Overexpression of this gene in tobacco BY-2 cells confers resistance to H2O2 and heat stresses. Overexpression in Arabidopsis causes upregulation of PDF1.2 and GST6. It is part of the ethylene signaling pathway and is predicted to act downstream of EIN2 and CTR1, but not under EIN3. The mRNA is cell-to-cell mobile.","ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN (EBP)","RELATED TO AP2 3 (RAP2.3);ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN (ATEBP);ETHYLENE RESPONSE FACTOR 72 (ERF72);ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN (EBP)"]
["AT4G06746","turquoise","encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.9). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1 and RAP2.10.","RELATED TO AP2 9 (RAP2.9)","RELATED TO AP2 9 (RAP2.9);DREB AND EAR MOTIF PROTEIN 5 (DEAR5)"]
["AT2G22010","turquoise","Encodes a protein predicted to act as a RING E3 ubiquitin ligase. It appears to regulate the stability of the KRP1/ICK1 cyclin dependent kinase inhibitor. Induced by beet severe curly virus (BSCTV) C4 protein.","RELATED TO KPC1 (RKP)","RELATED TO KPC1 (RKP)"]
["AT3G61260","turquoise","Lipid raft regulatory protein, crucial for plasma membrane nanodomain assembly to control plasmodesmata aperture and functionality. Negatively regulates the cell-to-cell movement of TuMV via competition with PCaP1 for binding actin filaments.","REMORIN 1.2 (REM1.2)","REMORIN 1.2 (REM1.2)"]
["AT2G45820","turquoise","Lipid raft regulatory protein, crucial for plasma membrane nanodomain assembly to control plasmodesmata aperture and functionality.","REMORIN 1.3 (Rem1.3)","REMORIN 1.3 (Rem1.3)"]
["AT3G22490","turquoise","Atrab28 plays a role in the ion cell balance during late embryogenesis and germination.","RESPONSIVE TO ABSCISIC ACID 28 (ATRAB28)","RESPONSIVE TO ABSCISIC ACID 28 (ATRAB28);RESPONSIVE TO ABSCISIC ACID 28 (RAB28)"]
["AT5G44790","turquoise","ATP dependent copper transporter vital for ethylene response pathway","RESPONSIVE-TO-ANTAGONIST 1 (RAN1)","RESPONSIVE-TO-ANTAGONIST 1 (RAN1);HEAVY METAL ASSOCIATED PROTEIN 51 (ATHMP51); (HMA7)"]
["AT2G41945","turquoise","Encodes a novel protein found only in plants. RED1 has two isoforms RED1.1 and RED1.2. It is localized to the nucleus. Loss of function mutants are embryo lethal but can be rescued before desiccation by embryo culture.","RETARDED EMBRYO DEVELOPMENT 1 (RED1)","RETARDED EMBRYO DEVELOPMENT 1 (RED1)"]
["AT3G08640","turquoise","alphavirus core family protein (DUF3411);(source:Araport11)","RETICULATA-RELATED 3 (RER3)","RETICULATA-RELATED 3 (RER3)"]
["AT5G52660","turquoise","Encodes RVE6, a homolog of the circadian rhythm regulator RVE8. rve4 rve6 rve8 triple mutants display an extremely long circadian period, with delayed and reduced expression of evening-phased clock genes.","REVEILLE 6 (RVE6)","REVEILLE 6 (RVE6)"]
["AT3G09600","turquoise","Encodes a MYB-like transcription factor similar to CIRCADIAN CLOCK-ASSOCIATED1 (CCA1) and ELONGATED HYPOCOTYL (LHY). Involved in the regulation of circadian clock by modulating the pattern of histone 3 (H3) acetylation. Functions as a transcriptional activator of evening element containing clock genes. Involved in heat shock response.","REVEILLE 8 (RVE8)","REVEILLE 8 (RVE8);LHY-CCA1-LIKE5 (LCL5)"]
["AT1G19530","turquoise","Direct target of RGA, plays an essential role in GA-mediated tapetum and pollen development.","RGA TARGET 1 (RGAT1)","RGA TARGET 1 (RGAT1)"]
["AT5G45160","turquoise","Root hair defective 3 GTP-binding protein (RHD3);(source:Araport11)","RHD-LIKE2 (RL2)","RHD-LIKE2 (RL2)"]
["AT3G12990","turquoise","Encodes a 3'-5' exoribonuclease, partially redundant with CER7. Involved in epicuticular wax biosynthesis.","RIBONUCLEASE PH45A (RRP45a)","RIBONUCLEASE PH45A (RRP45a)"]
["AT5G39850","turquoise","Ribosomal protein S4;(source:Araport11)","RIBOSOMAL PROTEIN US4Y (US4Y)","RIBOSOMAL PROTEIN US4Y (US4Y)"]
["AT5G44280","turquoise","Encodes a nuclear localized protein with similarity to animal polycomb repressive core complex1 (PRC1) core component RING.Appears to function redundantly with ATRING1b, a close paralog. Both interact physically with CLF and LHP1 and appear to function together to repress class I KNOX gene expression.","RING 1A (RING1A)","RING 1A (RING1A);ARABIDOPSIS THALIANA RING 1A (ATRING1A)"]
["AT1G03770","turquoise","Encodes a nuclear localized protein with similarity to animal polycomb repressive core complex1 (PRC1) core component RING.Appears to function redundantly with ATRING1a, a close paralog. Both interact physically with CLF and LHP1 and appear to function together to repress class I KNOX gene expression.","RING 1B (RING1B)","RING 1B (RING1B)"]
["AT1G15100","turquoise","Encodes a putative RING-H2 finger protein RHA2a.","RING-H2 FINGER A2A (RHA2A)","RING-H2 FINGER A2A (RHA2A)"]
["AT4G00335","turquoise","RING-H2 finger B1A;(source:Araport11)","RING-H2 FINGER B1A (RHB1A)","RING-H2 FINGER B1A (RHB1A)"]
["AT1G80670","turquoise","This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays, and may be involved in the formation of a CUL4-based E3 ubiquitin ligase","RNA EXPORT FACTOR 1 (RAE1)","RNA EXPORT FACTOR 1 (RAE1)"]
["AT5G05450","turquoise","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","RNA HELICASE 18 (RH18)","RNA HELICASE 18 (RH18)"]
["AT1G60620","turquoise","RNA polymerase I subunit 43;(source:Araport11)","RNA POLYMERASE I SUBUNIT 43 (RPAC43)","RNA POLYMERASE I SUBUNIT 43 (ATRPAC43);RNA POLYMERASE I SUBUNIT 43 (RPAC43)"]
["AT3G54760","turquoise","RRM1 interacts with SUVH9 and FVE and has an auxiliary role in RNA-directed DNA methylation.","RNA RECOGNITION MOTIF-CONTAINING PROTEIN 1 (RRM1)","RNA RECOGNITION MOTIF-CONTAINING PROTEIN 1 (RRM1)"]
["AT1G17640","turquoise","Belongs to a member of the RNA-binding glycine-rich (RBG) gene superfamily.","RNA-BINDING GLYCINE-RICH PROTEIN D1 (RBGD1)","RNA-BINDING GLYCINE-RICH PROTEIN D1 (RBGD1)"]
["AT3G13224","turquoise","Belongs to a member of the RNA-binding glycine-rich (RBG) gene superfamily.","RNA-BINDING GLYCINE-RICH PROTEIN D3 (RBGD3)","RNA-BINDING GLYCINE-RICH PROTEIN D3 (RBGD3)"]
["AT1G58470","turquoise","Encodes an mRNA-binding protein that contains two RNA recognition motifs (RRMs) and is expressed in proliferating tissues. Preferentially binds UUAGG, GUAGG and/or UUAGU. Loss of function of RBP1 causes decreased root length.","RNA-BINDING PROTEIN 1 (RBP1)","RNA-BINDING PROTEIN 1 (ATRBP1);RNA-BINDING PROTEIN 1 (RBP1)"]
["AT1G60200","turquoise","RBM25 is an alternative splicing factor involved in mediation of abiotic stress response and ABA response. Its expression is modulated by a variety of stressors and it in turn appears to affect the ratio of splice variants of stress responsive genes such as HAB1.2/HAB1.1.","RNA-BINDING PROTEIN 25 (RBM25)","RNA-BINDING PROTEIN 25 (RBM25)"]
["AT3G20420","turquoise","double-stranded RNA binding / ribonuclease III. Required for 3' external transcribed spacer (ETS) cleavage of the pre-rRNA in vivo. Localizes in the nucleus and cytoplasm.","RNASE THREE-LIKE PROTEIN 2 (RTL2)","RNASE THREE-LIKE PROTEIN 2 (RTL2);RNASEIII-LIKE 2 (ATRTL2)"]
["AT5G45150","turquoise","RNAse THREE-like protein 3;(source:Araport11)","RNASE THREE-LIKE PROTEIN 3 (RTL3)","RNASE THREE-LIKE PROTEIN 3 (RTL3)"]
["AT1G26370","turquoise","RNA helicase family protein;(source:Araport11)","ROOT INITIATION DEFECTIVE 1 (RID1)","ROOT INITIATION DEFECTIVE 1 (RID1); (PRP22)"]
["AT3G45890","turquoise","Encodes RUS1 (root UVB sensitive 1), a protein that contains DUF647 (domain of unknown function 647), a domain highly conserved in eukaryotes. The primary root of rus1 is hypersensitive to very low-fluence-rate (VLF) UVB.","ROOT UVB SENSITIVE 1 (RUS1)","ROOT UVB SENSITIVE 1 (RUS1);WEAK AUXIN RESPONSE 3 (WXR3)"]
["AT2G23470","turquoise","DUF647 domain containing protein. Mutants are male sterile with defects in endothecium, tapetum and stamen maturation.","ROOT UV-B SENSITIVE 4 (RUS4)","ROOT UV-B SENSITIVE 4 (RUS4)"]
["AT5G10520","turquoise","ROP binding protein kinases 1;(source:Araport11)","ROP BINDING PROTEIN KINASES 1 (RBK1)","ROP BINDING PROTEIN KINASES 1 (RBK1)"]
["AT5G58710","turquoise","Encodes cyclophilin ROC7. The mRNA is cell-to-cell mobile.","ROTAMASE CYP 7 (ROC7)","ROTAMASE CYP 7 (ROC7)"]
["AT3G25230","turquoise","Encodes a a high molecular weight member of the FK506 binding protein (FKBP) family. It has three FKBP12-like domains, tetratricopeptide repeats, and a putative calmodulin binding domain. Modulates thermotolerance by interacting with HSP90.1 and affecting the accumulation of HsfA2-regulated sHSPs. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","ROTAMASE FKBP 1 (ROF1)","ROTAMASE FKBP 1 (ROF1); (ATFKBP62);FK506 BINDING PROTEIN 62 (FKBP62)"]
["AT5G51450","turquoise","Encodes RING-finger type ubiquitin ligases.","RPM1 INTERACTING PROTEIN 3 (RIN3)","RPM1 INTERACTING PROTEIN 3 (RIN3)"]
["AT1G12210","turquoise","RFL1 has high sequence similarity to the adjacent disease resistance (R) gene RPS5.","RPS5-LIKE 1 (RFL1)","RPS5-LIKE 1 (RFL1)"]
["AT1G77680","turquoise","Ribonuclease II/R family protein;(source:Araport11)","RRP44 HOMOLOG B (RRP44B)","RRP44 HOMOLOG B (RRP44B);SUPPRESSOR OF VARICOSE (SOV); (ATRRP44B)"]
["AT5G58020","turquoise","Encodes a replication termination factor 2 domain containing protein involved in the regulation of pre-mRNA splicing.","RTF2 DOMAIN PROTEIN (RTF2)","RTF2 DOMAIN PROTEIN (RTF2);RTF2 DOMAIN PROTEIN (ATRTF2)"]
["AT3G17715","turquoise","Probably not a pseudogene based on evidence for transcription (RNA-seq) and translation (Ribo-seq) described in PMID:27791167","S-ADENOSYLMETHIONINE DECARBOXYLASE 5 (SAMDC5)","S-ADENOSYLMETHIONINE DECARBOXYLASE 5 (SAMDC5)"]
["AT5G22450","turquoise","SAGA complex subunit. Regulates gene expression by affecting histone H3 acetylation.","SAGA COMPLEX SUBUNIT 1 (SCS1)","SAGA COMPLEX SUBUNIT 1 (SCS1)"]
["AT4G29790","turquoise","SAGA complex subunit. Regulates gene expression by affecting histone H3 acetylation.","SAGA COMPLEX SUBUNIT 2B (SCS2B)","SAGA COMPLEX SUBUNIT 2B (SCS2B)"]
["AT2G01980","turquoise","Encodes a plasma membrane-localized Na+/H+ antiporter SOS1. Functions in the extrusion of toxic Na+ from cells and is essential for plant salt tolerance. Has 12 predicted transmembrane domains in the N-terminal region and a long cytoplasmic tail of approx. 700 aa at the C-terminal side. SOS1 interacts through its predicted cytoplasmic tail with RCD1, a regulator of oxidative-stress responses, suggesting that SOS1 might function in oxidative-stress tolerance.","SALT OVERLY SENSITIVE 1 (SOS1)","SALT OVERLY SENSITIVE 1 (SOS1);ARABIDOPSIS SALT OVERLY SENSITIVE 1 (ATSOS1);ARABIDOPSIS NA+/H+ ANTIPORTER 7 (ATNHX7)"]
["AT1G75540","turquoise","Encodes a B-box zinc finger transcription factor BBX21 (also named STH2/salt tolerance homolog2 and LHUS/long hypocotyl under shade). Interacts with COP1 to control de-etiolation. Also genetically interacts with COP1 to regulate shade avoidance. The mRNA is cell-to-cell mobile.","B-BOX DOMAIN PROTEIN 21 (BBX21)","SALT TOLERANCE HOMOLOG2 (STH2);B-BOX DOMAIN PROTEIN 21 (BBX21);LONG HYPOCOTYL UNDER SHADE (LHUS);B BOX 21 (AtBBX21)"]
["AT5G60410","turquoise","Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling","SAP AND MIZ1 DOMAIN- CONTAINING LIGASE1 (SIZ1)","SAP AND MIZ1 DOMAIN- CONTAINING LIGASE1 (SIZ1); (ATSIZ1)"]
["AT3G18380","turquoise","A specific subunit of MINU1/2-associated SWI/SNF complex, aka MAS complex (PMID: 36189880,PMID:36471048)","SAWADEE HOMEODOMAIN HOMOLOG 2 (SHH2)","SAWADEE HOMEODOMAIN HOMOLOG 2 (SHH2);DNA-BINDING TRANSCRIPTION FACTOR 2 (DTF2)"]
["AT1G55310","turquoise","Encodes a SR spliceosome protein that is localized to nuclear specks, interacts with SR45 and the U1-70K protein of the U1 snRNP, has sequence similar to human SC35 protein. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010, 22:2926.","SC35-LIKE SPLICING FACTOR 33 (SCL33)","SC35-LIKE SPLICING FACTOR 33 (SR33);SC35-LIKE SPLICING FACTOR 33 (SCL33);SC35-LIKE SPLICING FACTOR 33 (At-SCL33)"]
["AT1G21450","turquoise","Encodes a scarecrow-like protein (SCL1). Member of GRAS gene family. The mRNA is cell-to-cell mobile.","SCARECROW-LIKE 1 (SCL1)","SCARECROW-LIKE 1 (SCL1)"]
["AT4G17230","turquoise","Encodes a scarecrow-like protein (SCL13). Member of GRAS gene family. Regulated by heat shock.","SCARECROW-LIKE 13 (SCL13)","SCARECROW-LIKE 13 (SCL13)"]
["AT1G07530","turquoise","Encodes a member of the GRAS family of transcription factors. The protein interacts with the TGA2 transcription factor and affects the transcription of stress-responsive genes. The protein is found in the nucleus and is also exported to the cytoplasm.","SCARECROW-LIKE 14 (SCL14)","SCARECROW-LIKE 14 (SCL14);ARABIDOPSIS THALIANA GRAS (GAI, RGA, SCR) 2 (ATGRAS2);GRAS (GAI, RGA, SCR) 2 (GRAS2)"]
["AT2G04890","turquoise","Encodes a scarecrow-like protein (SCL21). Member of GRAS gene family.","SCARECROW-LIKE 21 (SCL21)","SCARECROW-LIKE 21 (SCL21)"]
["AT1G50420","turquoise","Encodes a scarecrow-like protein (SCL3) Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay).","SCARECROW-LIKE 3 (SCL3)","SCARECROW-LIKE 3 (SCL3);SCARECROW-LIKE 3 (SCL-3)"]
["AT5G11860","turquoise","Encodes a SCP1-like small phosphatase (SSP). Three SSPs form a unique group with long N-terminal extensions: AT5G46410 (SSP4), AT5G11860 (SSP5), AT4G18140 (SSP4b). SSP4 and SSP4b were localized exclusively in the nuclei, whereas SSP5 accumulated in both nuclei and cytoplasm. All three SSPs encodes active CTD phosphatases like animal SCP1 family proteins, with distinct substrate specificities: SSP4 and SSP4b could dephosphorylate both Ser2-PO(4) and Ser5-PO(4) of CTD, whereas SSP5 dephosphorylated only Ser5-PO(4).","SCP1-LIKE SMALL PHOSPHATASE 5 (SSP5)","SCP1-LIKE SMALL PHOSPHATASE 5 (SSP5)"]
["AT4G32300","turquoise","S-domain-2 5;(source:Araport11)","S-DOMAIN-2 5 (SD2-5)","S-DOMAIN-2 5 (SD2-5)"]
["AT4G18520","turquoise","Encodes a PPR (pentatricopeptide repeat) protein PDM1/SEL1. Involved in RNA editing and splicing of plastid genes.","SEEDLING LETHAL 1 (SEL1)","SEEDLING LETHAL 1 (SEL1); (PDM1)"]
["AT1G29760","turquoise","Membrane protein involved in lipid droplet biogenesis primarily in pollen. The interaction motif on SEIPIN2 for VAP27-1 is restricted to the N-terminal 30 amino acids that contain an FFAT motif.","SEIPIN2 (SEIPIN2)","SEIPIN2 (SEIPIN2)"]
["AT5G13030","turquoise","Chloroplast localized homolog of SELO. Loss of function mutants have reduced production of reactive oxygen species (ROS) and higher ROS scavenging.","SELENOPROTEIN O (SELO)","SELENOPROTEIN O (SELO)"]
["AT3G47300","turquoise","SELT-like protein precursor;(source:Araport11)","SELT-LIKE PROTEIN PRECURSOR (SELT)","SELT-LIKE PROTEIN PRECURSOR (SELT)"]
["AT1G17020","turquoise","Encodes a novel member of the Fe(II)/ascorbate oxidase gene family; senescence-related gene.","SENESCENCE-RELATED GENE 1 (SRG1)","SENESCENCE-RELATED GENE 1 (SRG1);SENESCENCE-RELATED GENE 1 (ATSRG1)"]
["AT4G04920","turquoise","Encodes a subunit of the MEDIATOR complex. Plays a role in the CBF pathway -downstream of CBF translation. Mutants have impaired cold responses, reduced levels of cold induced RNA transcripts, are sensitive to osmotic stress. Required for expression of CBF-controlled cold-upregulated genes and some, but not all, other cold up-regulated genes. Required for recruitment of the Mediator complex and RNA polymerase II to CBF-controlled cold-responsive genes. Required for expression of some dark-upregulated genes and auxin mediated gene expression. SFR6 was isolated as a suppressor of cell wall defects in cob6 mutant background.","SENSITIVE TO FREEZING 6 (SFR6)","SENSITIVE TO FREEZING 6 (SFR6);GLASSY HAIR 2 (GLH2);MEDIATOR 16 (MED16);INSENSITIVE TO EXOGENOUS NAD+ 1 (IEN1);YELLOW AND SENSITIVE TO IRON-DEFICIENCY 1 (YID1); (AtSFR6)"]
["AT3G26680","turquoise","involved in a SNM-dependent recombinational repair process of oxidatively induced DNA damage.","SENSITIVE TO NITROGEN MUSTARD 1 (SNM1)","SENSITIVE TO NITROGEN MUSTARD 1 (SNM1);SENSITIVE TO NITROGEN MUSTARD 1 (ATSNM1)"]
["AT1G73310","turquoise","serine carboxypeptidase-like 4;(source:Araport11)","SERINE CARBOXYPEPTIDASE-LIKE 4 (scpl4)","SERINE CARBOXYPEPTIDASE-LIKE 4 (scpl4)"]
["AT3G10450","turquoise","serine carboxypeptidase-like 7;(source:Araport11)","SERINE CARBOXYPEPTIDASE-LIKE 7 (SCPL7)","SERINE CARBOXYPEPTIDASE-LIKE 7 (SCPL7)"]
["AT3G48780","turquoise","Encodes one of the two LCB2 subunits (LCB2a and LCB2b) of serine palmitoyltransferase, an enzyme involved in sphingolipid biosynthesis. LCB2a and LCB2b are functional redundant. Double mutants are gametophytic lethal. The mRNA is cell-to-cell mobile.","SERINE PALMITOYLTRANSFERASE 1 (SPT1)","SERINE PALMITOYLTRANSFERASE 1 (ATSPT1);SERINE PALMITOYLTRANSFERASE 1 (SPT1)"]
["AT4G15410","turquoise","serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime gamma;(source:Araport11)","SERINE/THREONINE PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B PRIME GAMMA (PUX5)","SERINE/THREONINE PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B PRIME GAMMA (PUX5)"]
["AT4G35780","turquoise","ACT-like protein tyrosine kinase family protein;(source:Araport11)","SERINE/THREONINE/TYROSINE KINASE 17 (STY17)","SERINE/THREONINE/TYROSINE KINASE 17 (STY17)"]
["AT2G27100","turquoise","Identified as a leaf form mutant by Redei having serrated leaves. Further analysis of the single loss of function allele indicated pleiotropic effects extending to many aspects of shoot development such as taller meristems, alterations in phase transition, phyllotaxy and branching. Encodes a single zinc finger containing protein that is expressed in meristems and organ primordia and forms a complex with both AtCBC (cap binding complex) proteins to control alternative splicing.","SERRATE (SE)","SERRATE (SE); (SERRATE)"]
["AT3G61740","turquoise","Encodes SET domain containing protein that acts redundantly with ATX4/5 to regulate histone H3-K4 methylation. Involved in bolting/flowering time together with ATX1 and ATX4.","SET DOMAIN PROTEIN 14 (SDG14)","SET DOMAIN PROTEIN 14 (SDG14);ARABIDOPSIS TRITHORAX 3 (ATX3)"]
["AT5G06620","turquoise","SET domain protein 38;(source:Araport11)","SET DOMAIN PROTEIN 38 (SDG38)","SET DOMAIN PROTEIN 38 (SDG38); (ATXR4)"]
["AT1G43850","turquoise","Encodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.SEU phase separates upon hyperosmotic stress to form nuclear condensates. SEU condensation is indispensable for osmotic stress tolerance, and loss of SEU dramatically compromises the expression of stress tolerance genes (PMID:36376475).","SEUSS (SEU)","SEUSS (SEU)"]
["AT3G58040","turquoise","Encodes a RING finger domain containing protein that interacts with AtRAP2.2. The mRNA is cell-to-cell mobile.","SEVEN IN ABSENTIA OF ARABIDOPSIS 2 (SINAT2)","SEVEN IN ABSENTIA OF ARABIDOPSIS 2 (SINAT2)"]
["AT1G78540","turquoise","Encodes a protein that contains an SH2 domain. It can pull down a 120-kD tyrosine-phosphorylated protein in vitro. It is predicted to act as a transcription factor.","SH2 DOMAIN PROTEIN B (SHB)","SH2 DOMAIN PROTEIN B (SHB)"]
["AT1G31440","turquoise","SH3 domain-containing protein;(source:Araport11)","SH3 DOMAIN-CONTAINING PROTEIN 1 (SH3P1)","SH3 DOMAIN-CONTAINING PROTEIN 1 (SH3P1)"]
["AT5G02130","turquoise","SSR1 encodes a tetratricopeptide repeat- containing protein localized in mitochondria. It is involved in root development, possibly by through effects on auxin transport. In ssr1 mutants, the expression PIN genes and trafficking of PIN2 is altered which in turn affects distribution of auxin in the roots.","(NDP1)","SHORT AND SWOLLEN ROOT 1 (SSR1); (NDP1)"]
["AT2G47130","turquoise","Encodes a short-chain dehydrogenase/reductase that is not involved in ABA biosynthesis but plays an important role in plant defense response to bacteria.","SHORT-CHAIN DEHYDROGENASE/REDUCTASE 3 (SDR3)","SHORT-CHAIN DEHYDROGENASE/REDUCTASE 3 (SDR3); (ATSDR3)"]
["AT4G36580","turquoise","Homologue of animal ATPase Family AAA Domain-Containing Protein 3 (ATAD3), which is involved in mitochondrial nucleoid organization; interacts with SHOT1.","SHOT1 BINDING ATPASE 4 (SBA4)","SHOT1 BINDING ATPASE 4 (SBA4);ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 3B2 (ATAD3B2)"]
["AT2G45690","turquoise","Encodes a protein with similarity to yeast Pep16p, a membrane localized protein involved in peroxisome assembly and protein-trafficking. SSE1 mutant seeds do not accumulate oils and dessicated seeds have a shrunken appearance. Involved in protein and oil body biogenesis. SSE is expressed during seed development, reaching the highest peak in mature siliques. Expression in leaves and roots is low compared to cotyledons and flowers. Located in peroxisomes and endoplasmic reticulum. Homologous to the peroxin PEX16 and complements the pex16 mutants of the yeast Yarrowia lipolytica.","SHRUNKEN SEED 1 (SSE1)","SHRUNKEN SEED 1 (SSE1); (SSE);PEROXIN 16 (PEX16);ARABIDOPSIS PEROXIN 16 (ATPEX16)"]
["AT3G48050","turquoise","Encodes a large protein with N-terminal bromo-adjacent homology (BAH) and transcription elongation factor S-II (TFS2N) domains and two C-terminal GW (glycine and tryptophan) repeats. It is nuclear and colocalizes with the processing-body component DCP1 in the cytoplasm. SOU is a component of the miRNA pathway and is involved in translational repression.","SHUTTLE' IN CHINESE (SUO)","SHUTTLE' IN CHINESE (SUO)"]
["AT1G07500","turquoise","SMR5 is a member of the SIAMESE-RELATED Cyclin-Dependent Kinase Inhibitor family. It is induced by ROS/oxidative stress.","SIAMESE-RELATED 5 (SMR5)","SIAMESE-RELATED 5 (SMR5)"]
["AT2G22300","turquoise","Encodes a putative CAM binding transcription factor. Loss of function mutations show enhanced resistance to fungal and bacterial pathogens suggesting that CAMTA functions to suppress defense responses.It acts in the cold response pathway, it can bind to and activate the expression of DREB1 genes.","SIGNAL RESPONSIVE 1 (SR1)","SIGNAL RESPONSIVE 1 (SR1);CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 3 (CAMTA3)"]
["AT2G35510","turquoise","Encodes a WWE domain-containing protein with 76% similarity to RCD1. The protein also contains a PARP signature upstream of the C-terminal protein interaction domain. The PARP signature may bind NAD+ and attach the ADP-ribose-moiety from NAD+ to the target molecule. Its presence suggests a role for the protein in ADP ribosylation.","SIMILAR TO RCD ONE 1 (SRO1)","SIMILAR TO RCD ONE 1 (SRO1)"]
["AT2G47300","turquoise","Encodes a protein involved in rRNA but not tRNA maturation.","SIMILAR TO YEAST POP1 (POP1)","SIMILAR TO YEAST POP1 (POP1)"]
["AT3G01320","turquoise","Encodes SIN3-like 1, a homolog of the transcriptional repressor SIN3 (AT1G24190).","SIN3-LIKE 1 (SNL1)","SIN3-LIKE 1 (SNL1)"]
["AT5G15020","turquoise","Encodes a homolog of the transcriptional repressor SIN3 (AT1G24190).","SIN3-LIKE 2 (SNL2)","SIN3-LIKE 2 (SNL2)"]
["AT5G16270","turquoise","Encodes a SCC1/REC8 ortholog that may be involved in mitosis and may represent a mitotic cohesin. Plays a role in somatic DNA double strand break damage repair. The mRNA is cell-to-cell mobile.","SISTER CHROMATID COHESION 1 PROTEIN 4 (SYN4)","SISTER CHROMATID COHESION 1 PROTEIN 4 (SYN4);ARABIDOPSIS HOMOLOG OF RAD21 3 (ATRAD21.3)"]
["AT4G05460","turquoise","Encodes a SKP1/ASK-Interacting protein.","SKP1/ASK-INTERACTING PROTEIN 19 (SKIP19)","SKP1/ASK-INTERACTING PROTEIN 19 (SKIP19); (ATSKIP19)"]
["AT5G45360","turquoise","Encodes a F-box subunit of the SCF E3 ubiquitin ligase complex that mediates the degradation of 14-3-3 proteins.","SKP1-INTERACTING PARTNER 31 (SKIP31)","SKP1-INTERACTING PARTNER 31 (SKIP31)"]
["AT4G27970","turquoise","Encodes a protein with ten predicted transmembrane helices. The SLAH2 protein has similarity to the SLAC1 protein involved in ion homeostasis in guard cells. But, it is not expressed in guard cells and cannot complement a slac1-2 mutant suggesting that it performs a different function. SLAH2:GFP localizes to the plasma membrane.","SLAC1 HOMOLOGUE 2 (SLAH2)","SLAC1 HOMOLOGUE 2 (SLAH2)"]
["AT4G33210","turquoise","Encodes SLOMO (SLOW MOTION), a F-box protein required for auxin homeostasis and normal timing of lateral organ initiation at the shoot meristem.","SLOW MOTION (SLOMO)","SLOW MOTION (SLOMO)"]
["AT1G16510","turquoise","Encodes a clade III SAUR gene with a distinctive expression pattern in root meristems. It is normally expressed in the quiescent center and cortex/endodermis initials and upon auxin stimulation, the expression is found in the endodermal layer. Overexpression studies suggest roles in cell expansion and auxin transport.","SMALL AUXIN UPREGULATED 41 (SAUR41)","SMALL AUXIN UPREGULATED 41 (SAUR41)"]
["AT3G61900","turquoise","SAUR-like auxin-responsive protein family;(source:Araport11)","SMALL AUXIN UPREGULATED RNA 33 (SAUR33)","SMALL AUXIN UPREGULATED RNA 33 (SAUR33)"]
["AT3G12955","turquoise","SAUR-like auxin-responsive protein family;(source:Araport11)","SMALL AUXIN UPREGULATED RNA 74 (SAUR74)","SMALL AUXIN UPREGULATED RNA 74 (SAUR74)"]
["AT1G67440","turquoise","Homolog of bacterial rsgA, functions in chloroplast ribosome biogenesis.","EMBRYO DEFECTIVE 1688 (emb1688)","SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE (RSGA);EMBRYO DEFECTIVE 1688 (emb1688)"]
["AT5G06210","turquoise","Encodes a chloroplast protein involved in the responses to salt and oxidative stresses.","SMALL RNA-BINDING PROTEIN 11 (S-RBP11)","SMALL RNA-BINDING PROTEIN 11 (S-RBP11)"]
["AT1G21190","turquoise","Small nuclear ribonucleoprotein family protein;(source:Araport11)","SM-LIKE 3A (LSM3A)","SM-LIKE 3A (LSM3A)"]
["AT3G59810","turquoise","Small nuclear ribonucleoprotein family protein;(source:Araport11)","SM-LIKE 6A (LSM6A)","SM-LIKE 6A (LSM6A)"]
["AT5G27720","turquoise","Small nuclear ribonucleoprotein family protein;(source:Araport11)","EMBRYO DEFECTIVE 1644 (emb1644)","SM-LIKE PROTEIN 4 (LSM4);EMBRYO DEFECTIVE 1644 (emb1644)"]
["AT2G42030","turquoise","Encodes a RING domain E3 ligase. Has overlapping function with MUSE1 in the negative regulation of defence responses. SIKIC2 (and possibly SIKIC1 and 3) is ubiquination target.","SNC1- ENHANCING 2 (MUSE2)","SNC1- ENHANCING 2 (MUSE2)"]
["AT3G48880","turquoise","Encodes an F-box protein, SNIPER4, that regulates the turnover of MUSE13 and MUSE14, redundant TRAF proteins serving as adaptors in the SCFCRP1 complex to facilitate the turnover of nucleotide-binding domain and leucine-rich repeats (NLR) immune receptors.","SNC1-IN&#64258;UENCING PLANT E3 LIGASE REVERSE GENETIC SCREEN 4 (SNIPER4)","SNC1-IN&#64258;UENCING PLANT E3 LIGASE REVERSE GENETIC SCREEN 4 (SNIPER4)"]
["AT3G29160","turquoise","encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It has also been shown to interact with the WD protein PDL1.","SNF1 KINASE HOMOLOG 11 (KIN11)","SNF1 KINASE HOMOLOG 11 (AKIN11);SNF1-RELATED PROTEIN KINASE 1.2 (SnRK1.2);SNF1 KINASE HOMOLOG 11 (KIN11);SNF1 KINASE HOMOLOG 11 (ATKIN11)"]
["AT1G60940","turquoise","encodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress.","SNF1-RELATED PROTEIN KINASE 2.10 (SNRK2.10)","SNF1-RELATED PROTEIN KINASE 2.10 (SNRK2.10);SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-10 (SNRK2-10);SNF1-RELATED KINASE 2B (SRK2B)"]
["AT5G07070","turquoise","Encodes CBL-interacting protein kinase 2 (CIPK2).","CBL-INTERACTING PROTEIN KINASE 2 (CIPK2)","SNF1-RELATED PROTEIN KINASE 3.2 (SnRK3.2);CBL-INTERACTING PROTEIN KINASE 2 (CIPK2)"]
["AT1G61140","turquoise","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein;(source:Araport11)","EMBRYO SAC DEVELOPMENT ARREST 16 (EDA16)","SNF2-RING-HELICASE?LIKE 4 (FRG4);EMBRYO SAC DEVELOPMENT ARREST 16 (EDA16)"]
["AT5G61210","turquoise","membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formation The mRNA is cell-to-cell mobile.","SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33 (SNAP33)","SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33 (SNAP33); (ATSNAP33B); (SNP33); (ATSNAP33)"]
["AT1G03790","turquoise","Encodes SOMNUS (SOM), a nucleus-localized CCCH-type zinc finger protein. SOM negatively regulates light-dependent seed germination downstream of PIL5 (AT2G20180).","SOMNUS (SOM)","SOMNUS (SOM);TANDEM CCCH ZINC FINGER PROTEIN 4 (TZF4); (ATTZF4); (ATC3H2)"]
["AT5G51970","turquoise","Encodes a sorbitol dehydrogenase that exhibits greatest oxidative activity with sorbitol, ribitol and xylitol as substrates. SDH can be thiolated in vitro.","SORBITOL DEHYDROGENASE (ATSDH)","SORBITOL DEHYDROGENASE (ATSDH)"]
["AT1G15240","turquoise","Encodes a member of the Arabidopsis sorting nexin family.","SORTING NEXIN 3 (SNX3)","SORTING NEXIN 3 (SNX3)"]
["AT3G48195","turquoise","Encodes a member of the Arabidopsis sorting nexin family.","SORTING NEXIN 5 (SNX5)","SORTING NEXIN 5 (SNX5)"]
["AT5G59790","turquoise","SOK5 is a DUF966 domain containing protein expressed in early embryos.","SOSEKI5 (SOK5)","SOSEKI5 (SOK5)"]
["AT3G10130","turquoise","Cholorplast plastoglobule localized heme binding protein.","SOUL HEME?BINDING PROTEIN 4 (SOUL4)","SOUL HEME?BINDING PROTEIN 4 (SOUL4)"]
["AT1G09070","turquoise","SRC2 specifically binds the peptide PIEPPPHH, and moves from ER to a vacuole fraction where it gets internalized. Involved in Protein Storage Vacuole targeting. The mRNA is cell-to-cell mobile.","SOYBEAN GENE REGULATED BY COLD-2 (SRC2)","SOYBEAN GENE REGULATED BY COLD-2 (SRC2);SOYBEAN GENE REGULATED BY COLD-2 ((AT)SRC2); (ATSRC2)"]
["AT5G06680","turquoise","Encodes protein similar to yeast SCP98. Yeast SCP98 is essential for the microtubule nucleation activity of the gamma-tubulin ring complexes. Enriched at the post-cytokinetic cell edges in leaves and roots. The mRNA is cell-to-cell mobile.","SPINDLE POLE BODY COMPONENT 98 (SPC98)","SPINDLE POLE BODY COMPONENT 98 (SPC98);GAMMA TUBULIN COMPLEX PROTEIN 3 (GCP3);SPINDLE POLE BODY COMPONENT 98 (ATSPC98);ARABIDOPSIS THALIANA GAMMA TUBULIN COMPLEX PROTEIN 3 (ATGCP3)"]
["AT3G11540","turquoise","Contains a tetratricopeptide repeat region, and a novel carboxy-terminal region. SPY acts as both a repressor of GA responses and as a positive regulation of cytokinin signalling. SPY may be involved in reducing ROS accumulation in response to stress. Regulates root hair patterning independently of 2 gibberellin signalling. Together with SEC functions to competitively regulate RGA1 (At2g01570). Negative regulator of trichome branching.","SPINDLY (SPY)","SPINDLY (SPY)"]
["AT3G45590","turquoise","Encodes a catalytic subunit of tRNA splicing endonuclease.","SPLICING ENDONUCLEASE 1 (SEN1)","SPLICING ENDONUCLEASE 1 (ATSEN1);SPLICING ENDONUCLEASE 1 (SEN1)"]
["AT1G30480","turquoise","recombination and DNA-damage resistance protein (DRT111). Part of SWAP1-SFPS-RRC1 splicing factor complex which modulates pre-mRNA. splicing to promote photomorphogenesis","DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 111 (DRT111)","SPLICING FACTOR FOR PHYTOCHROME SIGNALING (SFPS);DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 111 (DRT111);REQUIRED FOR SNC4-1D 2 (RSN2)"]
["AT1G20980","turquoise","Encodes a nuclear plant-specific protein with features characteristic of a transcriptional regulator, including a nuclear localization signal sequence, a plant-specific DNA binding domain (the SBP box), and a protein interaction motif (ankyrin repeats). It unctions as a transcriptional regulator that plays a role not only in sensitivity to FB1, but also in the development of normal plant architecture. The mRNA is cell-to-cell mobile.","SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 14 (SPL14)","SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 14 (SPL14); (FBR6); (SPL1R2);SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 14 (ATSPL14)"]
["AT1G45976","turquoise","S-ribonuclease binding protein 1;(source:Araport11)","S-RIBONUCLEASE BINDING PROTEIN 1 (SBP1)","S-RIBONUCLEASE BINDING PROTEIN 1 (SBP1)"]
["AT5G65685","turquoise","SS5 is a chloroplast-localized protein that is related to the canonical starch synthases (most closely to SS4), but is catalytically inactive. Arabidopsis ss5 mutants have near-normal total transitory starch contents, but produce fewer and larger starch granules in their chloroplast. SS5 can bind to starch in vitro, and interacts with MRC/PII1 in vivo.","STARCH SYNTHASE 5 (SS5)","STARCH SYNTHASE 5 (SS5)"]
["AT5G58270","turquoise","Encodes a mitochondrial half-molecule ABC transporter, a member of ATM subfamily. Mutants are dwarfed, chlorotic plants with altered leaf morphology. ATM3 transcription is induced by Cd(II) or Pb(II). Involved in heavy metal resistance. Arabidopsis thaliana has three ATM genes, namely ATM1, ATM2 and ATM3. Only ATM3 has an important function for plant growth. Role in Moco biosynthesis.","ATP-BINDING CASSETTE B25 (ABCB25)","STARIK 1 (STA1);ARABIDOPSIS THALIANA ABC TRANSPORTER OF THE MITOCHONDRION 3 (ATATM3);ABC TRANSPORTER OF THE MITOCHONDRION 3 (ATM3);ATP-BINDING CASSETTE B25 (ABCB25)"]
["AT4G03430","turquoise","Encodes a nuclear protein similar to the human U5 small ribonucleoprotein-associated 102-kD protein and to the yeast pre-mRNA splicing factors Prp1p and Prp6p. STA1 expression is upregulated by cold stress, and the sta1-1 mutant is defective in the splicing of the cold-induced COR15A gene. Luciferase imaging was used to isolate a recessive mutant, sta1-1, with enhanced stability of the normally unstable luciferase transcript. This mutation also causes the stabilization of some endogenous gene transcripts and has a range of developmental and stress response phenotypes.","STABILIZED 1 (STA1)","STARIK 1 (STA1);STABILIZED 1 (STA1);EMBRYO DEFECTIVE 2770 (EMB2770)"]
["AT3G48860","turquoise","coiled-coil protein;(source:Araport11)","STOMATAL CYTOKINESIS DEFECTIVE 2 (SCD2)","STOMATAL CYTOKINESIS DEFECTIVE 2 (SCD2)"]
["AT4G12040","turquoise","A20/AN1-like zinc finger family protein;(source:Araport11)","STRESS-ASSOCIATED PROTEIN 7 (SAP7)","STRESS-ASSOCIATED PROTEIN 7 (SAP7); (AtSAP7)"]
["AT5G15920","turquoise","Encodes SMC5 (STRUCTURAL MAINTENANCE OF CHROMOSOMES 5), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.","STRUCTURAL MAINTENANCE OF CHROMOSOMES 5 (SMC5)","STRUCTURAL MAINTENANCE OF CHROMOSOMES 5 (SMC5); (ATSMC5);EMBRYO DEFECTIVE 2782 (EMB2782)"]
["AT1G71950","turquoise","SPI-1 is a member of the I9 inhibitor family. It is an inhibitor of SBT4.13 subtilase.","SUBTILISIN PROPEPTIDE-LIKE INHIBITOR 1 (SPI-1)","SUBTILISIN PROPEPTIDE-LIKE INHIBITOR 1 (SPI-1)"]
["AT3G10380","turquoise","Subunit of the Putative Arabidopsis Exocyst Complex","SUBUNIT OF EXOCYST COMPLEX 8 (SEC8)","SUBUNIT OF EXOCYST COMPLEX 8 (SEC8);SUBUNIT OF EXOCYST COMPLEX 8 (ATSEC8)"]
["AT1G11260","turquoise","Encodes a H+/hexose cotransporter. The mRNA is cell-to-cell mobile.","SUGAR TRANSPORTER 1 (STP1)","SUGAR TRANSPORTER 1 (ATSTP1);SUGAR TRANSPORTER 1 (STP1)"]
["AT1G67810","turquoise","Encodes a protein capable of stimulating the cysteine desulfurase activity of CpNifS (AT1G08490) in vitro. SufE2:GFP localizes to the chloroplasts where it is likely to play a role in iron-sulfur cluster assembly. Transcript levels for this gene are high in the pollen relative to other organs based on RT-PCR analysis. The mRNA is cell-to-cell mobile.","SULFUR E2 (SUFE2)","SULFUR E2 (SUFE2)"]
["AT5G50680","turquoise","Encodes a protein that is part of a heterodimeric SUMO E1 activating enzyme.","SUMO ACTIVATING ENZYME 1B (SAE1B)","SUMO ACTIVATING ENZYME 1B (SAE1B);ARABIDOPSIS THALIANA SUMO ACTIVATING ENZYME 1B (ATSAE1B)"]
["AT5G50580","turquoise","Encodes one of the two subunits of the SUMO activation enzyme required during sumolation. Sumolation is a post-translational protein modification process similar to ubiquitination during which a polypeptide (SUMO) is covalently attached to a target protein.","SUMO-ACTIVATING ENZYME 1B (SAE1B)","SUMO-ACTIVATING ENZYME 1B (SAE1B); (AT-SAE1-2)"]
["AT5G48655","turquoise","RING/U-box superfamily protein. SUMO- targeted ubiquitin ligase.","SUMO-TARGETED UBIQUITIN E3 LIGASE 1 (STUBL1)","SUMO-TARGETED UBIQUITIN E3 LIGASE 1 (STUBL1)"]
["AT1G66650","turquoise","RING/U-box superfamily protein. SUMO- targeted ubiquitin ligase. Mutants are late flowering. Interacts with CDF2 suggesting a role in reducing the levels of this floral regulatory protein.","SUMO-TARGETED UBIQUITIN E3 LIGASE 4 (STUBL4)","SUMO-TARGETED UBIQUITIN E3 LIGASE 4 (STUBL4)"]
["AT2G44410","turquoise","RING/U-box superfamily protein. SUMO- targeted ubiquitin ligase.","SUMO-TARGETED UBIQUITIN E3 LIGASE 6 (STUBL6)","SUMO-TARGETED UBIQUITIN E3 LIGASE 6 (STUBL6)"]
["AT3G54230","turquoise","Encodes a splicing factor SUA (suppressor of abi3-5), homologous to the human protein RBM5. Controls alternative splicing of the developmental regulator ABI3.","SUPPRESSOR OF ABI3-5 (SUA)","SUPPRESSOR OF ABI3-5 (SUA)"]
["AT4G36150","turquoise","TIR domain containing intracellular immune receptor; required for defense signaling initiated by some transmembrane pattern recognition receptors and contributes to the unbridled spread of cell death in lesion simulating disease 1. Together with RNLs, SADR1 regulates defense gene expression at infection site borders, likely in a non-cell autonomous manner.","SUPPRESSOR OF AITF1-INDUCED AUTOIMMUNITY 1) (SAA1)","SUPPRESSOR OF AITF1-INDUCED AUTOIMMUNITY 1) (SAA1);SUPPRESSOR OF ADR1-L2 1 (SADR1)"]
["AT4G34100","turquoise","Encodes a putative E3 ubiquitin ligase that is involved in cuticular wax biosynthesis and regulates 3-hydroxy-3-methylglutaryl-CoA reductase (HMGR) activity. HMGR catalyzes the major rate-limiting step of the mevalonic acid (MVA) pathway from which sterols and other isoprenoids are synthesized. Lines carrying a recessive mutation in this locus have reduced chain-length distribution, weakly glaucous stem surface, and has reduced fertility in early flowers, non-spreading floret, downward cupped leaves, leaf waxes nearly pure C24 and C26 acid.","ECERIFERUM 9 (CER9)","SUPPRESSOR OF DRY2 DEFECTS 1 (SUD1);ECERIFERUM 9 (CER9);DEGRADATION OF ALPHA2 10A (ATDOA10A)"]
["AT1G25580","turquoise","Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage.","SUPPRESSOR OF GAMMA RADIATION 1 (SOG1)","SUPPRESSOR OF GAMMA RADIATION 1 (SOG1);ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 8 (ANAC008)"]
["AT5G57710","turquoise","SMAX1 (SUPPRESSOR OF MAX2 1) is a member of an eight-gene family in Arabidopsis that has weak similarity to AtHSP101, a ClpB chaperonin required for thermotolerance. SMAX1 is an important component of KAR/SL signaling during seed germination and seedling growth, but is not necessary for all MAX2-dependent responses. The mRNA is cell-to-cell mobile.","SUPPRESSOR OF MAX2 1 (SMAX1)","SUPPRESSOR OF MAX2 1 (SMAX1)"]
["AT3G06670","turquoise","SMEK1 forms a catalytically active complex with PP4 proteins. The complex has been shown to target and dephosphorylate HYL1 which in turn promotes miRNA biogenesis. Mutants have pleiotrophic phenotypes and decreased production of miRNA. SMEK1 accumulation is responsive to ABA.","SUPPRESSOR OF MEK 1 (SMEK1)","SUPPRESSOR OF MEK 1 (SMEK1);PLATINUM SENSITIVE 2 LIKE (PSY2L); (PP4R3)"]
["AT1G21580","turquoise","Encodes a zinc-finger protein that co-localizes with the exosome-associated RNA helicase HEN2 and functions as a co-factor of nuclear RNA quality control by the nucleoplasmic exosome.","SUPPRESSOR OF PAS2 1 (SOP1)","SUPPRESSOR OF PAS2 1 (SOP1)"]
["AT4G37460","turquoise","Encodes a tetratricopeptide repeat domain containing protein that shows sequence similarity to those of transcriptional repressors in other organisms. Involved in mediating effector-triggered immunity.","SUPPRESSOR OF RPS4-RLD 1 (SRFR1)","SUPPRESSOR OF RPS4-RLD 1 (SRFR1);SUPPRESSOR OF RPS4-RLD 3 (SRFR3); (SRFR3)"]
["AT5G11310","turquoise","The SOAR1 gene encodes a pentatricopeptide repeat (PPR) protein which localizes to both the cytosol and nucleus. Down-regulation of SOAR1 strongly enhances, but up-regulation of SOAR1 almost completely impairs, ABA responses, revealing that SOAR1 is a critical, negative, regulator of ABA signalling. Further genetic evidence supports that SOAR1 functions downstream of ABAR and probably upstream of an ABA-responsive transcription factor ABI5. Changes in the SOAR1 expression alter expression of a subset of ABA-responsive genes including ABI5. These findings provide important information to elucidate further the functional mechanism of PPR proteins and the complicated ABA signalling network.","SUPPRESSOR OF THE ABAR OVEREXPRESSOR 1 (SOAR1)","SUPPRESSOR OF THE ABAR OVEREXPRESSOR 1 (SOAR1)"]
["AT2G26460","turquoise","Encodes SMU2, a protein involved in RNA splicing.","SUPPRESSORS OF MEC-8 AND UNC-52 2 (SMU2)","SUPPRESSORS OF MEC-8 AND UNC-52 2 (SMU2)"]
["AT5G14530","turquoise","Encodes a low molecular weight nuclear WDR protein which displays functional homology to the Swd2 protein, an essential subunit of the yeast histone methylation COMPASS complex. APRF1 acts upstream of FLC and promotes flowering under long day conditions.","ANTHESIS PROMOTING FACTOR 1 (APRF1)","SWD2-LIKE-A (S2LA);ANTHESIS PROMOTING FACTOR 1 (APRF1)"]
["AT5G66240","turquoise","Encodes a WD40-repeat protein that interacts with the E3 Cullin Ring Ligase subunit DDB1a and is involved in secondary wall modification and thickening by regulating the degradation of specific proteins. RNAi-mediated silencing results in anther indehiscence and infertility.","UBIQUITIN LIGASE COMPLEX SUBUNIT 1 (ULCS1)","SWD2-LIKE-B (S2LB);UBIQUITIN LIGASE COMPLEX SUBUNIT 1 (ULCS1)"]
["AT1G65660","turquoise","Encodes a CCHC zinc finger protein that may function as a step II splicing factor. In an epigenetic allele of SMP1 (in which SMP1 and SMP2 mRNA is reduced) organs are smaller and contain fewer cells.","SWELLMAP 1 (SMP1)","SWELLMAP 1 (SMP1)"]
["AT5G07970","turquoise","Identified as a specific subunit of SYD-associated SWI/SNF (SAS) complexes (PMID:36471048).","SYD-ASSOCIATED SWI/SNF COMPLEX SUBUNIT 2 (SYS2)","SYD-ASSOCIATED SWI/SNF COMPLEX SUBUNIT 2 (SYS2)"]
["AT2G20990","turquoise","Encodes a protein specifically localized to the ER-PM boundary with similarity to synaptotagmins, a class of membrane trafficking proteins. SYT1 is expressed in all tissues. Loss of function mutations show hypersensitivity to NaCl and electrolyte leakage from the plasma membrane. SYT1 also affects calcium dependent freezing tolerance and mechanical stress response. Regulates endocytosis endosome recycling at the plasma membrane, but not membrane traffic along the secretory pathway. SYT1 may have a role in membrane repair such as membrane resealing after freezing induced damage. SYT1 binds to phosphatidylinositol phosphates in vitro. It is distributed to immobile tubules and likely plays an important role in the formation of the tubular ER network as well as in cellular ER-PM tethering.","SYNAPTOTAGMIN A (SYTA)","SYNAPTOTAGMIN A (SYTA); (ATSYT1)"]
["AT1G16240","turquoise","Encodes one of 24 Arabidopsis syntaxins. Its mRNA has been shown to be expressed; TGNE/PM localized.","SYNTAXIN OF PLANTS 51 (SYP51)","SYNTAXIN OF PLANTS 51 (SYP51); (ATSYP51)"]
["AT5G43630","turquoise","Encodes a zinc knuckle protein that negatively regulates morning specific growth. The role of TZP in hypocotyl elongation was established through a QTL analysis of BayXSha RIL populations. The Bay-0 allele contains a deletion causing a frameshift mutation. TZP is under circadian control and acts to regulate morning-specific hypocotyl growth. The mRNA is cell-to-cell mobile.","TANDEM ZINC KNUCKLE PROTEIN (TZP)","TANDEM ZINC KNUCKLE PROTEIN (TZP)"]
["AT1G50030","turquoise","TOR is a protein kinase, conserved across eukaryotes (called mTOR in mammals), that monitors nutrient availability to coordinate metabolism (PMID: 32649861). TOR is a member of the phosphatidylinositol 3-kinase-related kinases (PIKKs) and forms a stable complex (TOR complex 1, or TORC1) with RAPTOR (At3g08850, At5g01770, PMID: 16377759) and LST8 (At3g18140, At2g22040, PMID: 22307851). TOR is expressed throughout Arabidopsis development (PMID: 32188942, PMID: 32051250) and is required to complete embryogenesis (PMID: 11983923). Diverse nutrients, hormones, and environmental cues can activate or suppress TOR activity (depending on the physiological and developmental context), including sugars (PMID: 23542588), amino acids (PMID: 33831352, PMID: 35327579), nucleotides (PMID: 33793860), auxins (PMID: 28246118), and light (PMID: 28223530). When conditions are favorable, TOR promotes growth by activating cell division (PMID: 23542588), cell expansion (PMID: 33288701), ribosome biogenesis (PMID: 33054972), protein synthesis (PMID: 33054972), and nucleotide synthesis (PMID: 33793860), among other processes. [Curated by Jake Brunkard ORCiD:0000-0001-6407-9393]","TARGET OF RAPAMYCIN (TOR)","TARGET OF RAPAMYCIN (TOR)"]
["AT5G58470","turquoise","TBP-associated factor 15B;(source:Araport11)","TBP-ASSOCIATED FACTOR 15B (TAF15b)","TBP-ASSOCIATED FACTOR 15B (TAF15b)"]
["AT1G73960","turquoise","Member of TFIID complex.","TBP-ASSOCIATED FACTOR 2 (TAF2)","TBP-ASSOCIATED FACTOR 2 (TAF2)"]
["AT5G43130","turquoise","TBP-associated factor 4;(source:Araport11)","TBP-ASSOCIATED FACTOR 4 (TAF4)","TBP-ASSOCIATED FACTOR 4 (TAF4)"]
["AT5G25150","turquoise","Encodes a putative TATA-binding-protein associated factor TAF5. TAFs are subunits of the general transcription factor IID (TFIID).","TBP-ASSOCIATED FACTOR 5 (TAF5)","TBP-ASSOCIATED FACTOR 5 (TAF5)"]
["AT1G55300","turquoise","TBP-associated factor 7;(source:Araport11)","TBP-ASSOCIATED FACTOR 7 (TAF7)","TBP-ASSOCIATED FACTOR 7 (TAF7)"]
["AT4G34340","turquoise","Member of SAGA complex, SPT module, interacts with HAG1.","TBP-ASSOCIATED FACTOR 8 (TAF8)","TBP-ASSOCIATED FACTOR 8 (TAF8)"]
["AT5G51910","turquoise","TCP family transcription factor;(source:Araport11)","TCP DOMAIN PROTEIN 19 (TCP19)","TCP DOMAIN PROTEIN 19 (TCP19)"]
["AT4G32700","turquoise","Encodes a DNA polymerase required for microhomology mediated repair of DNA double strand breaks and is required for T-DNA integration. The protein contains two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. Mutant plants are proficient for homologous recombination, homology-directed repair, gene targeting, and transient expression of T-DNA .","TEBICHI (TEB)","TEBICHI (TEB);POLYMERASE THETA (POLQ)"]
["AT3G04710","turquoise","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","TETRATRICOPEPTIDE REPEAT 10 (TPR10)","TETRATRICOPEPTIDE REPEAT 10 (TPR10)"]
["AT2G41520","turquoise","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","TETRATRICOPEPTIDE REPEAT 15 (TPR15)","TETRATRICOPEPTIDE REPEAT 15 (TPR15);DNA J PROTEIN C62 (DJC62)"]
["AT1G04530","turquoise","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","TETRATRICOPEPTIDE REPEAT 4 (TPR4)","TETRATRICOPEPTIDE REPEAT 4 (TPR4)"]
["AT5G21990","turquoise","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808). Functions as a chaperone receptor at the chloroplast outer envelope, mediating Hsp70-dependent protein targeting to chloroplasts. It has been localized to the ER membrane, interacts with the Sec translocon, and has a potential function in post-translational protein transport into the ER. The mRNA is cell-to-cell mobile.","TETRATRICOPEPTIDE REPEAT 7 (TPR7)","TETRATRICOPEPTIDE REPEAT 7 (TPR7); (ATTPR7);OUTER ENVELOPE PROTEIN 61 (OEP61)"]
["AT5G06839","turquoise","bZIP transcription factor family protein;(source:Araport11)","TGACG (TGA) MOTIF-BINDING PROTEIN 10 (TGA10)","TGACG (TGA) MOTIF-BINDING PROTEIN 10 (TGA10); (bZIP65)"]
["AT3G12250","turquoise","basic leucine zipper transcription factor involved in the activation of SA-responsive genes.","TGACG MOTIF-BINDING FACTOR 6 (TGA6)","TGACG MOTIF-BINDING FACTOR 6 (TGA6); (BZIP45)"]
["AT5G65210","turquoise","Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.","TGACG SEQUENCE-SPECIFIC BINDING PROTEIN 1 (TGA1)","TGACG SEQUENCE-SPECIFIC BINDING PROTEIN 1 (TGA1)"]
["AT1G65980","turquoise","thioredoxin-dependent peroxidase","THIOREDOXIN-DEPENDENT PEROXIDASE 1 (TPX1)","THIOREDOXIN-DEPENDENT PEROXIDASE 1 (TPX1)"]
["AT5G23070","turquoise","Encodes a thymidine kinase that salvages DNA precursors. The pyrimidine salvage pathway is crucial for chloroplast development and genome replication, as well as for the maintenance of its integrity.","THYMIDINE KINASE 1B (TK1B)","THYMIDINE KINASE 1B (TK1B); (TK2); (ATTK1B)"]
["AT3G15070","turquoise","Encodes a RING-type E3 ligase that positively regulates CIN-like TCP activity to promote leaf development by mediating the degradation of the TCP repressor TIE1.","TIE1-ASSOCIATED 33 RING-TYPE E3 LIGASE 2 (TEAR2)","TIE1-ASSOCIATED 33 RING-TYPE E3 LIGASE 2 (TEAR2); (CTL02)"]
["AT5G48780","turquoise","disease resistance protein (TIR-NBS class);(source:Araport11)","TIR-NBS20 (TN20)","TIR-NBS20 (TN20)"]
["AT3G63500","turquoise","Encodes a PHD-finger protein that, with TTA2, is redundantly required for MP-dependent embryonic root meristem initiation.","TITANIA 2 (TTA2)","TITANIA 2 (TTA2); (OBE4)"]
["AT2G02180","turquoise","Necessary for the efficient multiplication of tobamoviruses. The mRNA is cell-to-cell mobile.","TOBAMOVIRUS MULTIPLICATION PROTEIN 3 (TOM3)","TOBAMOVIRUS MULTIPLICATION PROTEIN 3 (TOM3)"]
["AT5G16880","turquoise","Encodes a member of the Arabidopsis TOL (TOM1-LIKE) family of ubiquitin binding proteins that acts redundantly in the recognition and further endocytic sorting of a PIN-FORMED (PIN)-type auxin carrier protein at the plasma membrane, modulating dynamic auxin distribution and associated growth responses.","TOM1-LIKE 1 (TOL1)","TOM1-LIKE 1 (TOL1)"]
["AT2G38410","turquoise","Encodes a member of the Arabidopsis TOL (TOM1-LIKE) family of ubiquitin binding proteins that acts redundantly in the recognition and further endocytic sorting of a PIN-FORMED (PIN)-type auxin carrier protein at the plasma membrane, modulating dynamic auxin distribution and associated growth responses.","TOM1-LIKE 6 (TOL6)","TOM1-LIKE 6 (TOL6)"]
["AT4G28760","turquoise","methyl-coenzyme M reductase II subunit gamma, putative (DUF3741);(source:Araport11)","TON1 RECRUITING MOTIF 20 (TRM20)","TON1 RECRUITING MOTIF 20 (TRM20)"]
["AT1G80490","turquoise","Encodes a protein with a Lissen-cephaly type-1-like homology (LisH) domain at the N terminus,a C-terminal to LisH (CTLH) domain, and 12 WD (tryptophan-aspartic acid)-40 repeats at the C terminus. It is closely related to Topless (TPL), which mediates auxin-dependent transcriptional repression during embryogenesis.","TOPLESS-RELATED 1 (TPR1)","TOPLESS-RELATED 1 (TPR1)"]
["AT5G55310","turquoise","Encodes one of two Arabidopsis type-I DNA topoisomerase I genes. Reducing the level of expression of this gene in a top1alpha (At5g55300) mutant background causes seedling lethality.","DNA TOPOISOMERASE 1 BETA (TOP1BETA)","TOPOISOMERASE 1 (TOP1);DNA TOPOISOMERASE 1 BETA (TOP1BETA);DNA TOPOISOMERASE I ALPHA (TOP1ALPHA)"]
["AT5G55860","turquoise","WEB1/PMI2 related protein involved in mecahnotransduction.TREPH1 is phosphorylated at position S625 in response to touch, and this is required for mechanosensitive growth response.","TOUCH-REGULATED PHOSPHOPROTEIN1 (TREPH1)","TOUCH-REGULATED PHOSPHOPROTEIN1 (TREPH1)"]
["AT5G20930","turquoise","Nuclear serine/threonine protein kinase that requires a coiled-coil region for oligomerization and catalytic activity. Required for leaf and flower development and is involved in the regulation of RNA interference. Expression localized to the developing style by stage 13.","TOUSLED (TSL)","TOUSLED (TSL)"]
["AT2G25330","turquoise","TRAF-like family protein;(source:Araport11)","TRAF CANDIDATE 1A (TC1A)","TRAF CANDIDATE 1A (TC1A)"]
["AT2G25320","turquoise","Encodes a protein with four TRAF (tumor necrosis factor receptor associated factor) domains that is required for autoimmunity of snc1 mutant (an auto-active allele of a Toll Interleukin1 receptor-nucleotide binding-Leu- rich repeat-type resistance gene - TIR-NB-LRR/TNL). TC1b is not a general downstream regulator of NLRs or PRRs, or a general regulator of SNC1 homeostasis. Over-expression results in autoimmunity. Localizes to puncta when expressed in Nicotiana benthamiana.","TRAF CANDIDATE 1B (TC1B)","TRAF CANDIDATE 1B (TC1B)"]
["AT5G09420","turquoise","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-V (TOC64-V)","TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-V (ATTOC64-V);ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-V (MTOM64); (AtmtOM64);OUTER MEMBRANE 64 (OM64);TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-V (TOC64-V)"]
["AT1G27290","turquoise","transmembrane protein;(source:Araport11)","TRANSMEMBRANE PROTEIN OF UNKNOWN FUNCTION (TMPU)","TRANSMEMBRANE PROTEIN OF UNKNOWN FUNCTION (TMPU)"]
["AT1G43620","turquoise","Encodes a UDP-glucose:sterol-glucosyltransferase. Mutants produce pale greenish-brown seeds whose dormancy was slightly reduced","(UGT80B1)","TRANSPARENT TESTA 15 (TT15);TRANSPARENT TESTA GLABROUS 15 (TTG15); (UGT80B1)"]
["AT2G18700","turquoise","Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.","TREHALOSE PHOSPHATASE/SYNTHASE 11 (TPS11)","TREHALOSE PHOSPHATASE/SYNTHASE 11 (ATTPS11);TREHALOSE-6-PHOSPHATE SYNTHASE 11 (TPS11); (ATTPSB);TREHALOSE PHOSPHATASE/SYNTHASE 11 (TPS11)"]
["AT1G72650","turquoise","Arabidopsis thaliana myb family transcription factor (At1g72650)","TRF-LIKE 6 (TRFL6)","TRF-LIKE 6 (TRFL6)"]
["AT2G19450","turquoise","Encodes Acyl-CoA:diacylglycerol acyltransferase (DGAT) catalyzes the final step of the triacylglycerol synthesis pathway. An insertion mutation in the TAG1 gene results in altered lipid phenotype. Role in senescence and seed development. Its preferred substrate is linolenoyl-CoA (C18:3-CoA).","TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1 (TAG1)","TRIACYLGLYCEROL BIOSYNTHESIS DEFECT 1 (TAG1); (AS11); (ABX45);ACYL-COA:DIACYLGLYCEROL ACYLTRANSFERASE 1 (DGAT1); (RDS1);ARABIDOPSIS THALIANA ACYL-COA:DIACYLGLYCEROL ACYLTRANSFERASE (ATDGAT); (ATDGAT1)"]
["AT2G14530","turquoise","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","TRICHOME BIREFRINGENCE-LIKE 13 (TBL13)","TRICHOME BIREFRINGENCE-LIKE 13 (TBL13)"]
["AT1G26190","turquoise","TTM2 is a triphosphate tunnel metalloenzyme that displays pyrophosphatase activity.It contains both a uridine kinase (UK) domain and CYTH domain. TTM2 is involved in negative regulation defense response to pathogens (PMID:28733390).","TRIPHOSPHATE TUNNEL METALLOENZYME 2 (TTM2)","TRIPHOSPHATE TUNNEL METALLOENZYME 2 (TTM2); (ATTTM2)"]
["AT5G66180","turquoise","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)","TRNA METHYLTRANSFERASE 4G (TRM4G)","TRNA METHYLTRANSFERASE 4G (TRM4G); (ATTRM4G)"]
["AT2G47770","turquoise","Encodes a membrane-bound protein designated AtTSPO (Arabidopsis thaliana TSPO-related). AtTSPO is related to the bacterial outer membrane tryptophan-rich sensory protein (TspO) and the mammalian mitochondrial 18 kDa Translocator Protein (18 kDa TSPO), members of the TspO/MBR domain-containing membrane proteins. Mainly detected in dry seeds, but can be induced in vegetative tissues by osmotic or salt stress or abscisic acid treatment. Located in endoplasmic reticulum and the Golgi stacks. It is degraded through the autophagy pathway.","TSPO(OUTER MEMBRANE TRYPTOPHAN-RICH SENSORY PROTEIN)-RELATED (TSPO)","TSPO(OUTER MEMBRANE TRYPTOPHAN-RICH SENSORY PROTEIN)-RELATED (ATTSPO);TSPO(OUTER MEMBRANE TRYPTOPHAN-RICH SENSORY PROTEIN)-RELATED (TSPO)"]
["AT1G25280","turquoise","Member of TLP family","TUBBY LIKE PROTEIN 10 (TLP10)","TUBBY LIKE PROTEIN 10 (TLP10);TUBBY LIKE PROTEIN 10 (AtTLP10)"]
["AT5G18680","turquoise","Member of TLP family of tubby like proteins that also contain an F-Box. Localized to the plasma membrane.","TUBBY LIKE PROTEIN 11 (TLP11)","TUBBY LIKE PROTEIN 11 (TLP11);TUBBY LIKE PROTEIN 11 (AtTLP11)"]
["AT3G06380","turquoise","Member of plant TLP family which differs in having an F box domain. Interacts with ASK proteins.Plasma membrane tethering is mediated by PIP2 binding domain. Mutants are insensitive to ABA. May act redundantly with its paralog TPL3.","TUBBY-LIKE PROTEIN 9 (TLP9)","TUBBY-LIKE PROTEIN 9 (ATTLP9);TUBBY-LIKE PROTEIN 9 (TLP9)"]
["AT3G10400","turquoise","Encodes a U12-type spliceosomal protein U11/U12-31K. Involved in U12 intron splicing via RNA chaperone activity and affects plant development.","U11/U12-31K (U11/U12-31K)","U11/U12-31K (U11/U12-31K)"]
["AT5G20620","turquoise","encodes a ubiquitin polyprotein.","UBIQUITIN 4 (UBQ4)","UBIQUITIN 4 (UBQ4)"]
["AT5G06460","turquoise","Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. The mRNA is cell-to-cell mobile.","UBIQUITIN ACTIVATING ENZYME 2 (UBA 2)","UBIQUITIN ACTIVATING ENZYME 2 (UBA 2);ARABIDOPSIS THALIANA UBIQUITIN ACTIVATING ENZYME 2 (ATUBA2)"]
["AT4G17510","turquoise","ubiquitin C-terminal hydrolase 3;(source:Araport11)","UBIQUITIN C-TERMINAL HYDROLASE 3 (UCH3)","UBIQUITIN C-TERMINAL HYDROLASE 3 (UCH3)"]
["AT4G12570","turquoise","Knock-out mutants showed accelerated senescence of leaves. The mRNA is cell-to-cell mobile.","UBIQUITIN PROTEIN LIGASE 5 (UPL5)","UBIQUITIN PROTEIN LIGASE 5 (UPL5)"]
["AT3G17205","turquoise","ubiquitin protein ligase 6;(source:Araport11)","UBIQUITIN PROTEIN LIGASE 6 (UPL6)","UBIQUITIN PROTEIN LIGASE 6 (UPL6)"]
["AT2G30110","turquoise","Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling.","UBIQUITIN-ACTIVATING ENZYME 1 (UBA1)","UBIQUITIN-ACTIVATING ENZYME 1 (ATUBA1);MODIFIER OF SNC1 5 (MOS5);UBIQUITIN-ACTIVATING ENZYME 1 (UBA1)"]
["AT3G55380","turquoise","May function together with UBC7 and UBC13 in the plant READ pathway, required in plant responses to multiple stress conditions.","UBIQUITIN-CONJUGATING ENZYME 14 (UBC14)","UBIQUITIN-CONJUGATING ENZYME 14 (UBC14)"]
["AT3G15355","turquoise","ubiquitin-conjugating enzyme 25;(source:Araport11)","UBIQUITIN-CONJUGATING ENZYME 25 (UBC25)","UBIQUITIN-CONJUGATING ENZYME 25 (UBC25);PHO2 FAMILY UBIQUITIN CONJUGATION ENZYME 1 (PFU1)"]
["AT1G55860","turquoise","encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.","UBIQUITIN-PROTEIN LIGASE 1 (UPL1)","UBIQUITIN-PROTEIN LIGASE 1 (UPL1)"]
["AT1G70320","turquoise","encodes a ubiquitin-protein ligase-like protein containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis.","UBIQUITIN-PROTEIN LIGASE 2 (UPL2)","UBIQUITIN-PROTEIN LIGASE 2 (UPL2)"]
["AT5G02880","turquoise","encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. The mRNA is cell-to-cell mobile.","UBIQUITIN-PROTEIN LIGASE 4 (UPL4)","UBIQUITIN-PROTEIN LIGASE 4 (UPL4)"]
["AT3G11910","turquoise","Ubiquitin-specific protease, which together with UBP12 deubiquitinates DA1, DAR1 and DAR2, hence reducing their peptidase activity. Works upstream of DA1, DAR1 and DAR2 to restrict their protease activity and hence fine-tune plant growth and development.","UBIQUITIN-SPECIFIC PROTEASE 13 (UBP13)","UBIQUITIN-SPECIFIC PROTEASE 13 (UBP13); (AtUBP13)"]
["AT4G31670","turquoise","ubiquitin-specific protease 18;(source:Araport11)","UBIQUITIN-SPECIFIC PROTEASE 18 (UBP18)","UBIQUITIN-SPECIFIC PROTEASE 18 (UBP18)"]
["AT4G30890","turquoise","Encodes a ubiquitin-specific protease.","UBIQUITIN-SPECIFIC PROTEASE 24 (UBP24)","UBIQUITIN-SPECIFIC PROTEASE 24 (UBP24)"]
["AT1G51710","turquoise","Ubiquitin-specific protease 6 (UBP6). Deubiquinating enzyme. Interacts with calmodulin.","UBIQUITIN-SPECIFIC PROTEASE 6 (UBP6)","UBIQUITIN-SPECIFIC PROTEASE 6 (UBP6); (ATUBP6)"]
["AT1G63180","turquoise","Encodes a protein with UDP-D-glucose 4-epimerase activity. Involved in pollen development.","UDP-D-GLUCOSE/UDP-D-GALACTOSE 4-EPIMERASE 3 (UGE3)","UDP-D-GLUCOSE/UDP-D-GALACTOSE 4-EPIMERASE 3 (UGE3)"]
["AT4G10960","turquoise","Encodes a protein with UDP-D-glucose 4-epimerase activity.","UDP-D-GLUCOSE/UDP-D-GALACTOSE 4-EPIMERASE 5 (UGE5)","UDP-D-GLUCOSE/UDP-D-GALACTOSE 4-EPIMERASE 5 (UGE5)"]
["AT3G50740","turquoise","UGT72E1 is an UDPG:coniferyl alcohol glucosyltransferase which specifically glucosylates sinapyl- and coniferyl aldehydes. The enzyme is thought to be involved in lignin metabolism.","UDP-GLUCOSYL TRANSFERASE 72E1 (UGT72E1)","UDP-GLUCOSYL TRANSFERASE 72E1 (UGT72E1)"]
["AT3G46670","turquoise","UDP-glucosyl transferase 76E11;(source:Araport11)","UDP-GLUCOSYL TRANSFERASE 76E11 (UGT76E11)","UDP-GLUCOSYL TRANSFERASE 76E11 (UGT76E11)"]
["AT3G46660","turquoise","UDP-glucosyl transferase 76E12;(source:Araport11)","UDP-GLUCOSYL TRANSFERASE 76E12 (UGT76E12)","UDP-GLUCOSYL TRANSFERASE 76E12 (UGT76E12)"]
["AT1G22380","turquoise","Encodes a putative UDP-glucosyl transferase. At1g22380 was initially identified as encoding the protein AAF87154, which has been classified as a bHLH protein (AtbHLH152). Subsequently it has been found that the AAF87154 protein appears to be encoded by the AT1G23970 genomic locus.","UDP-GLUCOSYL TRANSFERASE 85A3 (UGT85A3)","UDP-GLUCOSYL TRANSFERASE 85A3 (AtUGT85A3);UDP-GLUCOSYL TRANSFERASE 85A3 (UGT85A3)"]
["AT2G30140","turquoise","Encodes a putative glycosyltransferase. Regulates flowering time via FLOWERING LOCUS C.","UDP-GLUCOSYL TRANSFERASE 87A2 (UGT87A2)","UDP-GLUCOSYL TRANSFERASE 87A2 (UGT87A2)"]
["AT5G49690","turquoise","UDP-glycosyltransferase that can act upon sulcotrione herbicide. Overexpression confers resistance to herbicide.","UDP-GLYCOSYLTRANSFERASE 91C1 (UGT91C1)","UDP-GLYCOSYLTRANSFERASE 91C1 (UGT91C1)"]
["AT1G16730","turquoise","hypothetical protein;(source:Araport11)","UNKNOWN PROTEIN 6 (UP6)","UNKNOWN PROTEIN 6 (UP6)"]
["AT2G03520","turquoise","Encodes AtUPS4, a member of the Arabidopsis ureide permease family.","UREIDE PERMEASE 4 (UPS4)","UREIDE PERMEASE 4 (ATUPS4);UREIDE PERMEASE 4 (UPS4);HRS1 HOMOLOG4 (HHO4)"]
["AT5G63860","turquoise","UV-B-specific signaling component that orchestrates expression of a range of genes with vital UV-protective functions. Located in the nucleus and the cytosol. Associates with chromatin via histones. UV-B light promotes URV8 protein accumulation in the nucleus. UVR8 interaction with COP1 is negatively regulated by RUP1 and RUP2.","UV RESISTANCE LOCUS 8 (UVR8)","UV RESISTANCE LOCUS 8 (UVR8);UV RESISTANCE LOCUS 8 (AtUVR8)"]
["AT2G14740","turquoise","Encodes a vacuolar sorting receptor that participates in vacuolar sorting in vegetative tissues and in seeds. The mRNA is cell-to-cell mobile.","VACULOLAR SORTING RECEPTOR 3 (VSR3)","VACULOLAR SORTING RECEPTOR 3 (ATVSR3);VACUOLAR SORTING RECEPTOR 3 (VSR3);VACUOLAR SORTING RECEPTOR 2;2 (VSR2;2);BINDING PROTEIN OF 80 KDA 2;2 (BP80-2;2);VACULOLAR SORTING RECEPTOR 3 (VSR3); (UXS2)"]
["AT1G48550","turquoise","VPS26C is a component of a retromer complex, it is involved in endosome to lysosome protein transport and root hair growth.","VACUOLAR PROTEIN SORTING (VPS26C)","VACUOLAR PROTEIN SORTING (VPS26C)"]
["AT1G12470","turquoise","zinc ion binding protein;(source:Araport11)","VACUOLAR PROTEIN SORTING 18 (VPS18)","VACUOLAR PROTEIN SORTING 18 (VPS18)"]
["AT1G22860","turquoise","Vacuolar sorting protein 39;(source:Araport11)","VACUOLAR PROTEIN SORTING 3 (VPS3)","VACUOLAR PROTEIN SORTING 3 (VPS3);MODIFIED TRANSPORT TO THE VACUOLE 10 (MTV10)"]
["AT4G21560","turquoise","vacuolar protein sorting-associated protein-like protein;(source:Araport11)","VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1 (VPS28-1)","VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28 HOMOLOG 1 (VPS28-1);VACUOLAR PROTEIN SORTING 28 (VPS28)"]
["AT2G38020","turquoise","MVB-to-vacuole trafficking protein. Necessary for proper vacuole formation and morphogenesis in Arabidopsis. Mutants show reduced transmission through pollen due to defects in tube growth. Does not survive as homozygote.","VACUOLELESS 1 (VCL1)","VACUOLELESS 1 (VCL1);MANGLED (MAN); (EMB258)"]
["AT3G13300","turquoise","Encodes VCS (VARICOSE). Involved in mRNA decapping. VCS forms a mRNA decapping complex with DCP1 (At1g08370) and DCP2 (At5g13570). Unlike DCP2, VCS itself does not have mRNA decapping activity in vitro. DCP1, DCP2 and VCS colocalize in cytoplasmic loci, which are putative Arabidopsis mRNA processing bodies. Null mutants of DCP1, DCP2, and VCS accumulate capped mRNAs with a reduced degradation rate. These mutants also share a similar lethal phenotype at the seedling cotyledon stage, with disorganized veins, swollen root hairs, and altered epidermal cell morphology. VCS is also required for leaf development.","VARICOSE (VCS)","VARICOSE (VCS)"]
["AT3G13290","turquoise","Immunoprecipitation with mRNA decapping complex members DCP1 and DCP2.","VARICOSE-RELATED (VCR)","VARICOSE-RELATED (VCR)"]
["AT1G02120","turquoise","Encodes VAD1 (Vascular Associated Death1), a regulator of cell death and defense responses in vascular tissues. VAD1 is a putative membrane associated protein and contains a GRAM domain. vad1 is a lesion mimic mutant that exhibits light conditional appearance of propagative HR (hypersensitive response)-like lesions along the vascular system. The mRNA is cell-to-cell mobile.","VASCULAR ASSOCIATED DEATH1 (VAD1)","VASCULAR ASSOCIATED DEATH1 (VAD1)"]
["AT2G42400","turquoise","VOZ transcription factor which acts as positive regulator of several salt-responsive genes. Functionally redundant in salt stress with VOZ1.","VASCULAR PLANT ONE ZINC FINGER PROTEIN 2 (VOZ2)","VASCULAR PLANT ONE ZINC FINGER PROTEIN 2 (VOZ2);VASCULAR PLANT ONE ZINC FINGER PROTEIN 2 (ATVOZ2)"]
["AT4G24220","turquoise","encodes a progesterone-5beta-reductase-like protein. It has enone reductase activity against a wide range of substrates, including 3-oxo-&#916;-4,5-steroids in vitro. The in vivo substrates and product of this enzyme have not yet been elucidated but it is likely to participate in steroid metabolism. The protein contains a mammalian death domain involved in programmed cell death. The gene is expressed in the vascular system and mutants carrying a dominant mutation in the gene have defective vascular patterning. VEP1 gene expression is induced specifically by wounding.","VEIN PATTERNING 1 (VEP1)","VEIN PATTERNING 1 (VEP1); (AWI31);&#916;4,5-STEROID-5[BETA]-REDUCTASE (5[beta]-StR)"]
["AT5G40270","turquoise","VEN4 is homologous to human SAMHD1 and functions in chloroplast biogenesis.","VENOSA 4 (VEN4)","VENOSA 4 (VEN4)"]
["AT2G25340","turquoise","Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family; TGN/vacuole localized. Required for abscisic acid-mediated inhibition of plasma membrane H+-ATPase activity.","VESICLE-ASSOCIATED MEMBRANE PROTEIN 712 (VAMP712)","VESICLE-ASSOCIATED MEMBRANE PROTEIN 712 (ATVAMP712); (VAMP712);VESICLE-ASSOCIATED MEMBRANE PROTEIN 712 (VAMP712)"]
["AT5G22360","turquoise","Member of Synaptobrevin-like AtVAMP7C, v-SNARE protein family.","VESICLE-ASSOCIATED MEMBRANE PROTEIN 714 (VAMP714)","VESICLE-ASSOCIATED MEMBRANE PROTEIN 714 (ATVAMP714);VESICLE-ASSOCIATED MEMBRANE PROTEIN 714 (VAMP714); (VAMP714)"]
["AT3G11100","turquoise","SANT and trihelix-domain protein. Interacts with agrobacterium virulence protein VirF. It also plays a role in regulation of histone acetylation during ethylene signaling. It binds EIN2 and EIN3 and histone H3.","VFP3 (VFP3)","VFP3 (VFP3);EIN2 NUCLEAR ASSOCIATED PROTEIN 1 (ENAP1);ASR3-INTERACTING TRANSCRIPTIONAL FACTOR (AITF1)"]
["AT1G47056","turquoise","Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB2,3, and 4. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes.","VIER F-BOX PROTEINE 1 (VFB1)","VIER F-BOX PROTEINE 1 (VFB1)"]
["AT3G50080","turquoise","Encodes an F-box protein. Based on genetic analysis appears to be functionally redundant with VFB1,3, and 4. When expression of all 4 genes is reduced plants show defects in growth and reduced expression of auxin response genes.","VIER F-BOX PROTEINE 2 (VFB2)","VIER F-BOX PROTEINE 2 (VFB2)"]
["AT4G11220","turquoise","VIRB2-interacting protein 2;(source:Araport11)","VIRB2-INTERACTING PROTEIN 2 (BTI2)","VIRB2-INTERACTING PROTEIN 2 (BTI2);RETICULAN LIKE PROTEIN B2 (RTNLB2);RETICULON 2 (RTN2)"]
["AT1G43700","turquoise","Encodes a VirE2-interacting protein. VIP1 mediates nuclear translocation of VirE2 via its amino half, and interacts with histone H2A via it carboxyl half. Involved in osmosensory response. The mRNA is cell-to-cell mobile.","VIRE2-INTERACTING PROTEIN 1 (VIP1)","VIRE2-INTERACTING PROTEIN 1 (VIP1);SULPHATE UTILIZATION EFFICIENCY 3 (SUE3); (ATVIP1)"]
["AT1G78310","turquoise","VQ motif-containing protein;(source:Araport11)","VQ MOTIF-CONTAINING PROTEIN 9 (VQ9)","VQ MOTIF-CONTAINING PROTEIN 9 (VQ9)"]
["AT5G53080","turquoise","WTG1 is a chloroplast localized TPR protein required for chloroplast biogenesis. Mutants are delayed in greening and defective in splicing petL and ndhG. WTG1 does not itself bind RNA but it does bind known editing factors MORF8 and MORF9.","WHITE TO GREEN 1 (WTG1)","WHITE TO GREEN 1 (WTG1)"]
["AT5G67600","turquoise","cysteine-rich TM module stress tolerance protein;(source:Araport11)","WINDHOSE 1 (WIH1)","WINDHOSE 1 (WIH1);CYSTEINE-RICH TRANSMEMBRANE MODULE 13 (ATHCYSTM13)"]
["AT5G58350","turquoise","Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.","WITH NO LYSINE (K) KINASE 4 (WNK4)","WITH NO LYSINE (K) KINASE 4 (WNK4); (ZIK2)"]
["AT5G41990","turquoise","Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Interacts specifically with and phosphorylates AtVHA-C, subunit C of the vacuolar H+-ATPase.","WITH NO LYSINE (K) KINASE 8 (WNK8)","WITH NO LYSINE (K) KINASE 8 (WNK8); (ATWNK8);EMF1-INTERACTING PROTEIN 1 (EIP1)"]
["AT5G11390","turquoise","Encodes one of the WPP domain-interacting proteins (WIT1/AT5G11390, WIT2/AT1G68910) required for RanGAP nuclear envelope association in root tip cells. Ran GTPase plays essential roles in multiple cellular processes, including nucleocytoplasmic transport, spindle formation, and postmitotic nuclear envelope reassembly. The cytoplasmic Ran GTPase activating protein RanGAP is critical to establish a functional RanGTP/RanGDP gradient across the nuclear envelope and is associated with the outer surface of the nuclear envelope in metazoan and higher plant cells. Arabidopsis thaliana RanGAP association with the root tip nuclear envelope requires a family of likely plant-specific nucleoporins combining coiled-coil and transmembrane domains (CC-TMD) and WPP domain-interacting proteins (WIPs). WIT1 and WIT2 have been identified as a second family of CC-TMD proteins, structurally similar, yet clearly distinct from the WIP family, that is required for RanGAP nuclear envelop association in root tip cells.","WPP DOMAIN-INTERACTING PROTEIN 1 (WIT1)","WPP DOMAIN-INTERACTING PROTEIN 1 (WIT1)"]
["AT2G03340","turquoise","Encodes WRKY DNA-binding protein 3 (WRKY3).","WRKY DNA-BINDING PROTEIN 3 (WRKY3)","WRKY DNA-BINDING PROTEIN 3 (WRKY3)"]
["AT1G13960","turquoise","Encodes WRKY DNA-binding protein 4 (WRKY4).","WRKY DNA-BINDING PROTEIN 4 (WRKY4)","WRKY DNA-BINDING PROTEIN 4 (WRKY4)"]
["AT5G59340","turquoise","Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. WOX2 has a putative Zinc finger domain downstream of the homeodomain. Transcripts are expressed in the egg cell, the zygote and the apical cell lineage and are reduced in met3-1 early embryos. This gene is necessary for cell divisions that form the apical embryo domain.","WUSCHEL RELATED HOMEOBOX 2 (WOX2)","WUSCHEL RELATED HOMEOBOX 2 (WOX2)"]
["AT1G15750","turquoise","Encodes a protein with several WD40 repeats at the C-terminus and predicted protein-protein interaction domains at the N-terminus. Together with the TOPLESS-RELATED PROTEINS (TPRs), it is thought to be involved in transcriptional repression of root-promoting genes in the top half of the embryo during the transition stage of embryogenesis. It can also interact with IAA12 through the EAR domain of IAA12 and the CTLH domain of TPL. The ability of IAA12 to repress transcription is diminished in a tpl-1 mutant background.","TOPLESS (TPL)","WUS-INTERACTING PROTEIN 1 (WSIP1);TOPLESS (TPL)"]
["AT3G15880","turquoise","TOPLESS family protein.","WUS-INTERACTING PROTEIN 2 (WSIP2)","WUS-INTERACTING PROTEIN 2 (WSIP2);TOPLESS-RELATED 4 (TPR4)"]
["AT4G34890","turquoise","Encodes a xanthine dehydrogenase, involved in purine catabolism. Ubiquitously expressed, but the transcript level is altered during aging, senescence, salt and cold stress, ABA treatment, and dark treatment. RNAi lines that suppress both XDH1 and XDH2 produce small plants with reduced fertility and accelerated leaf senescence. Role in drought tolerance.","XANTHINE DEHYDROGENASE 1 (XDH1)","XANTHINE DEHYDROGENASE 1 (ATXDH1);XANTHINE DEHYDROGENASE 1 (XDH1)"]
["AT2G21150","turquoise","Encodes a nuclear localized XAP5 family protein involved in light regulation of the circadian clock and photomorphogenesis. XCT loss of function mutations also show decreased levels of DCL1, 3 and 4 and correspondingly lower levels of certain small RNAs suggesting a role in sRNA biogenesis.","XAP5 CIRCADIAN TIMEKEEPER (XCT)","XAP5 CIRCADIAN TIMEKEEPER (XCT)"]
["AT5G48720","turquoise","Encodes XRI1 (X-ray induced 1). Required for post-meiotic stages of pollen development and male and female meiosis. Maybe required for meiotic DNA repair. Inducible by X-ray. Homozygous xri1 mutants are sterile due to extensive chromosome fragmentation.","X-RAY INDUCED TRANSCRIPT 1 (XRI1)","X-RAY INDUCED TRANSCRIPT 1 (XRI1);X-RAY INDUCED TRANSCRIPT (XRI)"]
["AT4G00230","turquoise","xylem serine peptidase 1;(source:Araport11)","XYLEM SERINE PEPTIDASE 1 (XSP1)","XYLEM SERINE PEPTIDASE 1 (XSP1)"]
["AT2G27200","turquoise","Encodes a cytosolic protein that shares 77.3% identity with AtLSG1-2 at the protein sequence level. The mRNA is cell-to-cell mobile.","YEAST LSG1 ORTHOLOGUE 1 (LSG1-1)","YEAST LSG1 ORTHOLOGUE 1 (LSG1-1)"]
["AT3G06290","turquoise","Encodes a component of the conserved TREX-2 complex that couples mRNA transcription with nucleo-cytoplasmic export, that is required for prevention of epigenetic gene silencing and has additional roles in regulating siRNAs and DNA methylation.","YEAST SAC3 HOMOLOG B (SAC3B)","YEAST SAC3 HOMOLOG B (SAC3B); (AtSAC3B)"]
["AT3G27020","turquoise","Arabidopsis thaliana metal-nicotianamine transporter YSL6","YELLOW STRIPE LIKE 6 (YSL6)","YELLOW STRIPE LIKE 6 (YSL6); (ATYSL6)"]
["AT5G57360","turquoise","Encodes clock-associated PAS protein ZTL; Also known as FKF1-like protein 2 or ADAGIO1(ADO1). A protein containing a PAS domain ZTL contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. ZTL is the F-box component of an SCF complex implicated in the degradation of TOC1.","ZEITLUPE (ZTL)","ZEITLUPE (ZTL);FKF1-LIKE PROTEIN 2 (FKL2);ADAGIO 1 (ADO1);LOV KELCH PROTEIN 1 (LKP1)"]
["AT5G13750","turquoise","zinc induced facilitator-like 1;(source:Araport11)","ZINC INDUCED FACILITATOR-LIKE 1 (ZIFL1)","ZINC INDUCED FACILITATOR-LIKE 1 (ZIFL1)"]
["AT1G75420","yellow","UDP-Glycosyltransferase superfamily protein;(source:Araport11)"]
["AT5G23955","yellow","transposable_element_gene;(source:Araport11);non-LTR retrotransposon family (LINE), has a 2.6e-41 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus);(source:TAIR10)"]
["AT4G33280","yellow","AP2/B3-like transcriptional factor family protein;(source:Araport11)"]
["AT4G29120","yellow","6-phosphogluconate dehydrogenase family protein;(source:Araport11)"]
["AT5G55640","yellow","Na-translocating NADH-quinone reductase subunit A;(source:Araport11)"]
["AT4G29070","yellow","Phospholipase A2 family protein;(source:Araport11)"]
["AT3G50620","yellow","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT3G19460","yellow","Reticulon family protein;(source:Araport11)"]
["AT5G40190","yellow","Identified in a screen for calmodulin-binding proteins obtained from an auxin treated cDNA library."]
["AT4G21585","yellow","Encodes a putative endonuclease but no demonstrable endonuclease activity, either towards single stranded DNA or mismatches, has been seen in vitro."]
["AT1G48040","yellow","Protein phosphatase 2C family protein;(source:Araport11)"]
["AT1G76610","yellow","MIZU-KUSSEI-like protein (Protein of unknown function, DUF617);(source:Araport11)"]
["AT1G05280","yellow","ERV-F (C)1 provirus ancestral Env polyprotein, putative (DUF604);(source:Araport11)"]
["AT1G49960","yellow","Xanthine/uracil permease family protein;(source:Araport11)"]
["AT5G41110","yellow","meiosis chromosome segregation family protein;(source:Araport11)"]
["AT5G18390","yellow","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT3G18350","yellow","Plant protein of unknown function (DUF639);(source:TAIR10)"]
["AT1G72230","yellow","Cupredoxin superfamily protein;(source:Araport11)"]
["AT5G27360","yellow","Encodes a sugar-porter family protein that unlike the closely related gene, SFP1, is not induced during leaf senescence."]
["AT1G09645","yellow","transmembrane protein;(source:Araport11)"]
["AT5G59960","yellow","K-stimulated pyrophosphate-energized sodium pump protein;(source:Araport11)"]
["AT4G36860","yellow","DAR1 is a member of a small (7 member) ubiquitin binding protein family. It appears to play a role in regulation of endoreduplication in leaf epidermal tissue."]
["AT1G20500","yellow","AMP-dependent synthetase and ligase family protein;(source:Araport11)"]
["AT2G23985","yellow","hypothetical protein;(source:Araport11)"]
["AT5G24316","yellow","proline-rich family protein;(source:Araport11)"]
["AT2G34700","yellow","Pollen Ole e 1 allergen and extensin family protein;(source:Araport11)"]
["AT1G74460","yellow","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates."]
["AT3G06570","yellow","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT3G04200","yellow","RmlC-like cupins superfamily protein;(source:Araport11)"]
["AT4G02630","yellow","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G76290","yellow","AMP-dependent synthetase and ligase family protein;(source:Araport11)"]
["AT3G20200","yellow","kinase with adenine nucleotide alpha hydrolases-like domain-containing protein;(source:Araport11)"]
["AT1G68680","yellow","SH3/FCH domain protein;(source:Araport11)"]
["AT1G68850","yellow","Peroxidase superfamily protein;(source:Araport11)"]
["AT4G38080","yellow","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT1G08340","yellow","Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein;(source:Araport11)"]
["AT3G11760","yellow","structural maintenance of chromosomes flexible hinge domain protein;(source:Araport11)"]
["AT4G16650","yellow","O-fucosyltransferase family protein;(source:Araport11)"]
["AT4G17215","yellow","Pollen Ole e 1 allergen and extensin family protein;(source:Araport11)"]
["AT1G50790","yellow","Plant mobile domain protein family;(source:Araport11)"]
["AT1G52155","yellow","transmembrane protein;(source:Araport11)"]
["AT3G58220","yellow","TRAF-like family protein;(source:Araport11)"]
["AT1G71940","yellow","SNARE associated Golgi protein family;(source:Araport11)"]
["AT2G28790","yellow","Pathogenesis-related thaumatin superfamily protein;(source:Araport11)"]
["AT1G69680","yellow","ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein);(source:Araport11)"]
["AT3G56870","yellow","hypothetical protein;(source:Araport11)"]
["AT3G47675","yellow","ternary complex factor MIP1 leucine-zipper protein;(source:Araport11)"]
["AT2G26070","yellow","Encodes a predicted membrane protein. Similar sequences are widely distributed and conserved in plants, animals and protists but absent in fungi and prokaryotes. The sequence has no known motifs and no biological function has been assigned in any species. In Arabidopsis, it appears to be involved in the negative regulation of the response to ethylene, is localized to the Golgi and is a positive regulator of ETR1."]
["AT1G79985","yellow","structural molecules protein;(source:Araport11)"]
["AT5G14480","yellow","beta-1,4-N-acetylglucosaminyltransferase family protein;(source:Araport11)"]
["AT5G38160","yellow","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)"]
["AT5G38830","yellow","Cysteinyl-tRNA synthetase, class Ia family protein;(source:Araport11)"]
["AT5G08360","yellow","Stu1, putative (DUF789);(source:Araport11)"]
["AT2G05632","yellow","hypothetical protein;(source:Araport11)"]
["AT3G03180","yellow","Got1/Sft2-like vescicle transport protein family;(source:Araport11)"]
["AT2G30960","yellow","myosin-M heavy chain-like protein;(source:Araport11)"]
["AT2G18360","yellow","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT4G10280","yellow","RmlC-like cupins superfamily protein;(source:Araport11)"]
["AT3G22121","yellow","Natural antisense transcript overlaps with AT3G22120. The RNA is cell-to-cell mobile."]
["AT2G23540","yellow","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates."]
["AT4G20460","yellow","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT5G07260","yellow","START (StAR-related lipid-transfer) lipid-binding domain-containing protein;(source:Araport11)"]
["AT3G13000","yellow","ubiquinone biosynthesis protein (Protein of unknown function, DUF547);(source:Araport11)"]
["AT1G13570","yellow","F-box/RNI-like superfamily protein;(source:Araport11)"]
["AT3G12730","yellow","Homeodomain-like superfamily protein;(source:Araport11)"]
["AT5G56369","yellow","Encodes a defensin-like (DEFL) family protein."]
["AT5G63700","yellow","zinc ion binding / DNA binding protein;(source:Araport11)"]
["AT5G50900","yellow","Involved in growth rates under elevated CO2 conditions."]
["AT1G67650","yellow","SRP72 RNA-binding domain-containing protein;(source:Araport11)"]
["AT2G19280","yellow","Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)"]
["AT1G55550","yellow","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT2G16990","yellow","Major facilitator superfamily protein;(source:Araport11)"]
["AT3G15630","yellow","plant/protein;(source:Araport11)"]
["AT2G01580","yellow","transmembrane protein;(source:Araport11)"]
["AT2G22510","yellow","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT5G17700","yellow","MATE efflux family protein;(source:Araport11)"]
["AT3G20340","yellow","Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress."]
["AT1G20270","yellow","2-oxoglutarate-dependent dioxygenase"]
["AT4G27745","yellow","Yippee family putative zinc-binding protein;(source:Araport11)"]
["AT1G74680","yellow","Exostosin family protein;(source:Araport11)"]
["AT5G56730","yellow","Insulinase (Peptidase family M16) protein;(source:Araport11)"]
["AT3G55960","yellow","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)"]
["AT5G50520","yellow","Major facilitator superfamily protein;(source:Araport11)"]
["AT4G19890","yellow","Pentatricopeptide repeat (PPR-like) superfamily protein;(source:Araport11)"]
["AT1G53050","yellow","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G71170","yellow","6-phosphogluconate dehydrogenase family protein;(source:Araport11)"]
["AT2G27900","yellow","coiled-coil protein;(source:Araport11)"]
["AT3G10915","yellow","Reticulon family protein;(source:Araport11)"]
["AT5G23410","yellow","other_RNA;(source:Araport11)"]
["AT1G25098","yellow","Natural antisense transcript overlaps with AT1G25097;(source:Araport11)"]
["AT5G42730","yellow","pseudogene similar to ACT domain-containing protein, similar to F-box family protein"]
["AT3G02610","yellow","Encodes one of two &#8710;9 palmitoyl-ACP desaturases responsible for the biosynthesis of &#969;-7 fatty acids in the maturing endosperm."]
["AT2G44230","yellow","hypothetical protein (DUF946);(source:Araport11)"]
["AT5G08250","yellow","Cytochrome P450 superfamily protein;(source:Araport11)"]
["AT1G62333","yellow","hypothetical protein;(source:Araport11)"]
["AT1G31670","yellow","Copper amine oxidase family protein;(source:Araport11)"]
["AT1G07870","yellow","Protein kinase superfamily protein;(source:Araport11)"]
["AT4G19670","yellow","RING/U-box superfamily protein;(source:Araport11)"]
["AT3G51980","yellow","ARM repeat superfamily protein;(source:Araport11)"]
["AT3G57070","yellow","Glutaredoxin family protein;(source:Araport11)"]
["AT4G02425","yellow","LYR motif protein;(source:Araport11)"]
["AT5G24760","yellow","GroES-like zinc-binding dehydrogenase family protein;(source:Araport11)"]
["AT5G60820","yellow","RING/U-box superfamily protein;(source:Araport11)"]
["AT3G13480","yellow","nuclear polyadenylated RNA-binding protein;(source:Araport11)"]
["AT4G14780","yellow","Protein kinase superfamily protein;(source:Araport11)"]
["AT2G25280","yellow","AmmeMemoRadiSam system protein B;(source:Araport11)"]
["AT1G48900","yellow","Signal recognition particle, SRP54 subunit protein;(source:Araport11)"]
["AT3G13677","yellow","hypothetical protein;(source:Araport11)"]
["AT5G55620","yellow","hypothetical protein;(source:Araport11)"]
["AT5G14995","yellow","Encodes a ECA1 gametogenesis related family protein"]
["AT4G25980","yellow","peroxidase superfamily protein;(source:Araport11)"]
["AT5G63520","yellow","F-box/LRR protein;(source:Araport11)"]
["AT4G12700","yellow","calcium ion-binding protein;(source:Araport11)"]
["AT5G62580","yellow","ARM repeat superfamily protein;(source:Araport11)"]
["AT5G14130","yellow","Peroxidase superfamily protein;(source:Araport11)"]
["AT3G29260","yellow","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT4G01090","yellow","Hypothetical protein; participates in wound-induced lateral root development."]
["AT5G25590","yellow","DNA ligase (DUF630 and DUF632);(source:Araport11)"]
["AT3G56260","yellow","hypothetical protein;(source:Araport11)"]
["AT2G40230","yellow","HXXXD-type acyl-transferase family protein;(source:Araport11)"]
["AT1G63300","yellow","Myosin heavy chain-related protein;(source:Araport11)"]
["AT3G17130","yellow","Plant invertase/pectin methylesterase inhibitor superfamily protein;(source:Araport11)"]
["AT5G05670","yellow","signal recognition particle binding protein;(source:Araport11)"]
["AT1G68470","yellow","Exostosin family protein;(source:Araport11)"]
["AT3G60180","yellow","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)"]
["AT5G04060","yellow","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT5G25510","yellow","Protein phosphatase 2A regulatory B subunit family protein;(source:Araport11)"]
["AT5G03905","yellow","Iron-sulfur cluster biosynthesis family protein;(source:Araport11)"]
["AT1G53690","yellow","Protein of unknown function that is homologous to At5g41010, which encodes a non-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB12."]
["AT1G68170","yellow","nodulin MtN21-like transporter family protein"]
["AT2G25690","yellow","DUF581 family protein, putative (DUF581);(source:Araport11)"]
["AT4G09580","yellow","SNARE associated Golgi protein family;(source:Araport11)"]
["AT1G72275","yellow","LOW protein: nuclease-like protein;(source:Araport11)"]
["AT5G13790","yellow","AGL15 (AGAMOUS-Like 15) is a member of the MADS domain family of regulatory factors. Although AGL15 is preferentially expressed during embryogenesis, AGL15 is also expressed in leaf primordia, shoot apical meristems and young floral buds, suggesting that AGL15 may play a role during post-germinative development. Transgenic plants that ectopically express AGL15 show delays in the transition to flowering, perianth abscission and senescence and fruit and seed maturation. Role in embryogenesis and gibberellic acid catabolism. Targets B3 domain transcription factors that are key regulators of embryogenesis.AGL15 binds the HAE promoter in floral receptacles and represses HAE expression. AGL15 is phosphorylated in a MKK4/5 dependent manner in floral receptacles. Serines 231 and 257 are phosphorylated in floral receptacles. AGL15 also directly regulates the expression of the peroxidase PRX17, linking it to lignified tissue expression."]
["AT5G38170","yellow","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)"]
["AT4G36610","yellow","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT3G11690","yellow","hypothetical protein;(source:Araport11)"]
["AT2G27340","yellow","N-acetylglucosaminylphosphatidylinositol de-N-acetylase family protein;(source:Araport11)"]
["AT5G11020","yellow","Protein kinase superfamily protein;(source:Araport11)"]
["AT1G62220","yellow","transmembrane protein;(source:Araport11)"]
["AT1G01225","yellow","NC domain-containing protein-like protein;(source:Araport11)"]
["AT4G24140","yellow","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT5G11960","yellow","magnesium transporter, putative (DUF803);(source:Araport11)"]
["AT5G04380","yellow","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT4G20040","yellow","Pectin lyase-like superfamily protein;(source:Araport11)"]
["AT1G61670","yellow","Lung seven transmembrane receptor family protein;(source:Araport11)"]
["AT3G07180","yellow","GPI transamidase component PIG-S-like protein;(source:Araport11)"]
["AT4G05110","yellow","equilibrative nucleoside transporter 6;(source:Araport11)"]
["AT2G47115","yellow","protein rolling protein;(source:Araport11)"]
["AT5G63410","yellow","Leucine-rich repeat protein kinase family protein;(source:Araport11)"]
["AT2G38180","yellow","SGNH hydrolase-type esterase superfamily protein;(source:Araport11)"]
["AT3G12150","yellow","alpha/beta hydrolase family protein;(source:Araport11)"]
["AT2G04230","yellow","FBD, F-box and Leucine Rich Repeat domains containing protein;(source:Araport11)"]
["AT5G39160","yellow","RmlC-like cupins superfamily protein;(source:Araport11)"]
["AT1G05450","yellow","Encodes a Protease inhibitor/seed storage/LTP family protein"]
["AT5G20045","yellow","transmembrane protein;(source:Araport11)"]
["AT1G25175","yellow","None;(source:Araport11)"]
["AT5G47635","yellow","Pollen Ole e 1 allergen and extensin family protein;(source:Araport11)"]
["AT2G22260","yellow","Encodes a homolog of the E. coli AlkB gene, whose protein product is a DNA repair enzyme important in reversing methylation damage."]
["AT1G62210","yellow","hypothetical protein;(source:Araport11)"]
["AT5G53050","yellow","alpha/beta-Hydrolases superfamily protein;(source:Araport11)"]
["AT1G56320","yellow","hypothetical protein;(source:Araport11)"]
["AT5G39250","yellow","F-box family protein;(source:Araport11)"]
["AT5G50630","yellow","Major facilitator superfamily protein;(source:Araport11)"]
["AT5G19410","yellow","ABC-2 type transporter family protein;(source:Araport11)"]
["AT2G47200","yellow","hypothetical protein;(source:Araport11)"]
["AT3G09085","yellow","transmembrane protein (DUF962);(source:Araport11)"]
["AT4G02485","yellow","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT2G24650","yellow","B3 domain-containing protein REM13;(source:Araport11)"]
["AT5G17530","yellow","phosphoglucosamine mutase family protein;(source:Araport11)"]
["AT2G02910","yellow","transmembrane protein (DUF616);(source:Araport11)"]
["AT4G14680","yellow","Encodes one of three A. thaliana ATP-sulfurylases. APS is the first enzyme of sulfate assimilation that catalyzes the formation of adenosine-5'-phosphosulfate from ATP and sulfate."]
["AT4G03010","yellow","RNI-like superfamily protein;(source:Araport11)"]
["AT2G16760","yellow","Calcium-dependent phosphotriesterase superfamily protein;(source:Araport11)"]
["AT2G47830","yellow","Cation efflux family protein;(source:Araport11)"]
["AT4G28740","yellow","LOW PSII ACCUMULATION-like protein;(source:Araport11)"]
["AT3G58980","yellow","F-box family protein;(source:Araport11)"]
["AT4G38500","yellow","Sept9 (DUF616);(source:Araport11)"]
["AT5G28390","yellow","RNA-binding (RRM/RBD/RNP motifs) family protein;(source:Araport11)"]
["AT3G50430","yellow","golgin;(source:Araport11)"]
["AT1G09490","yellow","similar to Eucalyptus gunnii alcohol dehydrogenase of unknown physiological function (GI:1143445), Vigna unguiculata (gi:1854445), NOT a cinnamyl-alcohol dehydrogenase; Location of EST gb:H37170, gb:H77227 and gb:AA605565"]
["AT5G38195","yellow","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)"]
["AT5G39130","yellow","RmlC-like cupins superfamily protein;(source:Araport11)"]
["AT5G08460","yellow","GDSL-motif esterase/acyltransferase/lipase. Enzyme group with broad substrate specificity that may catalyze acyltransfer or hydrolase reactions with lipid and non-lipid substrates."]
["AT2G15440","yellow","polysaccharide biosynthesis protein (DUF579);(source:Araport11)"]
["AT3G56050","yellow","Protein kinase family protein;(source:Araport11)"]
["AT3G13510","yellow","carboxyl-terminal peptidase, putative (DUF239);(source:Araport11)"]
["AT1G72190","yellow","D-isomer specific 2-hydroxyacid dehydrogenase family protein;(source:Araport11)"]
["AT5G62400","yellow","transmembrane protein;(source:Araport11)"]
["AT1G02260","yellow","Divalent ion symporter;(source:Araport11)"]
["AT3G17160","yellow","hypothetical protein;(source:Araport11)"]
["AT5G10290","yellow","leucine-rich repeat transmembrane protein kinase family protein;(source:Araport11)"]
["AT4G16800","yellow","3-methylglutaconyl-CoA hydratase localized to mitochondria. Knockout displays accelerated senescence when subjected to extended dark conditions;knockout senescing leaves and knockout seeds accumulate leu, ile, and val."]
["AT1G11905","yellow","B-cell receptor-associated protein 31-like protein;(source:Araport11)"]
["AT4G37820","yellow","transmembrane protein;(source:Araport11)"]
["AT4G25300","yellow","2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein;(source:Araport11)"]
["AT3G19500","yellow","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)"]
["AT5G20450","yellow","myosin;(source:Araport11)"]
["AT4G39560","yellow","Galactose oxidase/kelch repeat superfamily protein;(source:Araport11)"]
["AT5G67620","yellow","PADRE protein up-regulated after infection by S. sclerotiorum."]
["AT1G48770","yellow","hypothetical protein (DUF1639);(source:Araport11)"]
["AT5G09540","yellow","Chaperone DnaJ-domain superfamily protein;(source:Araport11)"]
["AT4G22390","yellow","F-box associated ubiquitination effector family protein;(source:Araport11)"]
["AT2G43880","yellow","Pectin lyase-like superfamily protein;(source:Araport11)"]
["AT5G49280","yellow","hydroxyproline-rich glycoprotein family protein;(source:Araport11)"]
["AT3G10760","yellow","Homeodomain-like superfamily protein;(source:Araport11)"]
["AT1G49160","yellow","Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its"]
["AT1G12600","yellow","UDP-N-acetylglucosamine (UAA) transporter family;(source:Araport11)"]
["AT3G29190","yellow","Terpenoid cyclases/Protein prenyltransferases superfamily protein;(source:Araport11)"]
["AT1G28765","yellow","hypothetical protein;(source:Araport11)"]
["AT2G18600","yellow","Ubiquitin-conjugating enzyme family protein;(source:Araport11)"]
["AT3G22070","yellow","proline-rich family protein;(source:Araport11)"]
["AT5G62800","yellow","Protein with RING/U-box and TRAF-like domain;(source:Araport11)"]
["AT3G18990","yellow","Required for vernalization. Essential for the complete repression of FLC in vernalized plants. Required for the methylation of histone H3"]
["AT2G45840","yellow","O-glucosyltransferase rumi-like protein (DUF821);(source:Araport11)"]
["AT3G57400","yellow","transmembrane protein;(source:Araport11)"]
["AT1G56420","yellow","antigenic heat-stable protein;(source:Araport11)"]
["AT2G42860","yellow","hypothetical protein;(source:Araport11)"]
["AT1G11380","yellow","PLAC8 family protein;(source:Araport11)"]
["AT3G55470","yellow","Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11)"]
["AT4G27250","yellow","NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)"]
["AT5G47150","yellow","YDG/SRA domain-containing protein;(source:Araport11)"]
["AT3G26670","yellow","magnesium transporter, putative (DUF803);(source:Araport11)"]
["AT3G21390","yellow","Encodes a mitochondrial thiamin diphosphate carrier."]
["AT3G52710","yellow","hypothetical protein;(source:Araport11)"]
["AT1G66250","yellow","O-Glycosyl hydrolases family 17 protein;(source:Araport11)"]
["AT1G52540","yellow","Protein kinase superfamily protein;(source:Araport11)"]
["AT2G33360","yellow","cadherin EGF LAG seven-pass G-type receptor, putative (DUF3527);(source:Araport11)"]
["AT5G58340","yellow","myb-like HTH transcriptional regulator family protein;(source:Araport11)"]
["AT3G14910","yellow","Rab3 GTPase-activating protein non-catalytic subunit;(source:Araport11)"]
["AT3G14630","yellow","putative cytochrome P450"]
["AT2G39750","yellow","S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)"]
["AT4G31060","yellow","encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. A maternally expressed imprinted gene."]
["AT4G19640","yellow","Encodes Ara7.","(ARA7)","(ARA7); (ARA-7); (ATRABF2B); (ATRAB5B); (RABF2B);ARABIDOPSIS RAB GTPASE HOMOLOG F2B (ATRAB-F2B);RAB GTPASE HOMOLOG F2B (RAB-F2B); (ATARA7)"]
["AT4G02080","yellow","A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.","SECRETION-ASSOCIATED RAS SUPER FAMILY 2 (SAR2)","(ASAR1); (ATSARA1C);SECRETION-ASSOCIATED RAS SUPER FAMILY 2 (ATSAR2);SECRETION-ASSOCIATED RAS SUPER FAMILY 2 (SAR2); (SAR1C)"]
["AT4G25000","yellow","Predicted to be secreted protein based on signalP prediction. Involved in starch mobilization. Mutants are defective in alpha-amylase activity. (Note: AMY1 has been found in the literature to be referred to as AMY3, which is not to be confused with AMY3/At1g69830).","ALPHA-AMYLASE-LIKE (AMY1)","(ATAMY1);ALPHA-AMYLASE-LIKE (AMY1)"]
["AT5G61500","yellow","autophagy-related (ATG) gene","(ATG3)","(ATATG3); (ATG3)"]
["AT3G47750","yellow","member of ATH subfamily","ATP-BINDING CASSETTE A4 (ABCA4)","(ATATH3);ATP-BINDING CASSETTE A4 (ABCA4)"]
["AT2G40420","yellow","Encodes a putative amino acid transporter involved in abiotic stress response.","(ATAVT6D)","(ATAVT6D)"]
["AT4G15415","yellow","B' regulatory subunit of PP2A (AtB'gamma)","(ATB' GAMMA)","(ATB' GAMMA)"]
["AT5G58620","yellow","Involved in control of defence gene expression post-transcriptionally through release from translation arrest within TZF9-PAB2-containing RNA granules. TZF9 shows phospho-mobility shift after flg22 treatment, inferred to be caused by phosphorylation through MPK3 and/or MPK6. The major MPK3/6-targeted phospho-sites are S181, S323, S343, S352, S356, S362 and S377.","TANDEM ZINC FINGER PROTEIN 9 (TZF9)","(ATC3H66);TANDEM ZINC FINGER PROTEIN 9 (TZF9)"]
["AT5G23240","yellow","DNAJ heat shock N-terminal domain-containing protein;(source:Araport11)","DNA J PROTEIN C76 (DJC76)","(ATDJC17);DNA J PROTEIN C76 (DJC76)"]
["AT3G63170","yellow","Encodes a plastid stroma localized fatty acid binding protein involved in fatty acid metabolism.","FATTY-ACID-BINDING PROTEIN 1 (FAP1)","(ATFAP1);FATTY-ACID-BINDING PROTEIN 1 (FAP1)"]
["AT2G05630","yellow","in the Arabidopsis autophagy pathway","(ATG8D)","(ATG8D)"]
["AT5G41080","yellow","Encodes a member of the glycerophosphodiester phosphodiesterase (GDPD) family.","GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 2 (GDPD2)","(AtGDPD2);GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 2 (GDPD2)"]
["AT4G13980","yellow","member of Heat Stress Transcription Factor (Hsf) family","(AT-HSFA5)","(AT-HSFA5);HEAT SHOCK TRANSCRIPTION FACTOR A5 (HSFA5)"]
["AT1G14580","yellow","C2H2-like zinc finger protein;(source:Araport11)","(ATIDD6)","(ATIDD6)"]
["AT3G08620","yellow","RNA-binding KH domain-containing protein;(source:Araport11)","(ATKH12)","(ATKH12)"]
["AT1G72310","yellow","Encodes a putative RING-H2 zinc finger protein ATL3 (ATL3).","(ATL3)","(ATL3)"]
["AT1G76410","yellow","RING/U-box superfamily protein;(source:Araport11)","(ATL8)","(ATL8)"]
["AT5G66100","yellow","Encodes a LAM domain containing protein that is involved in leaf senescence.","LA RELATED PROTEIN 1B (LARP1B)","(ATLARP1B);LA RELATED PROTEIN 1B (LARP1B)"]
["AT1G22310","yellow","Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.","METHYL-CPG-BINDING DOMAIN 8 (MBD8)","(ATMBD8);METHYL-CPG-BINDING DOMAIN 8 (MBD8)"]
["AT1G27040","yellow","Major facilitator superfamily protein;(source:Araport11)","NRT1/ PTR FAMILY 4.5 (NPF4.5)","(ATNPF4.5);NRT1/ PTR FAMILY 4.5 (NPF4.5)"]
["AT5G63180","yellow","Pectate lyase","(ATPLL15)","(ATPLL15)"]
["AT2G45220","yellow","Pectin methylesterase involved in pectin remodelling. Regulated by its PRO region that triggers PME activity in the resistance to Botrytis cinerea.","PECTIN METHYLESTERASE 17 (PME17)","(ATPME17);PECTIN METHYLESTERASE 17 (PME17)"]
["AT3G09900","yellow","RAB GTPase homolog E1E;(source:Araport11)","RAB GTPASE HOMOLOG E1E (RABE1e)","(ATRAB8E);RAB GTPASE HOMOLOG E1E (ATRABE1E);RAB GTPASE HOMOLOG E1E (RABE1e)"]
["AT5G67580","yellow","Encodes a telomeric DNA binding protein and Single Myb Histone (SMH) gene family member. In vitro, the protein preferentially binds double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand.","(TRB2)","(ATTBP3);TELOMERE REPEAT BINDING FACTOR 2 (ATTRB2);TELOMERE-BINDING PROTEIN 3 (TBP3); (TRB2)"]
["AT5G08330","yellow","Circadian oscillator protein which interacts with bZIP63 and regulates a response of the circadian oscillator to sugar. Is not required for the sugar-induced circadian phase advance in the morning; regulates a response of CCA1 to sugars. Promotes together with TCP7, 8, 14, 15, 21, 22 and 23 endoreduplication-dependent cell expansion in leaf.","TCP DOMAIN PROTEIN 21 (TCP21)","(ATTCP21);CCA1 HIKING EXPEDITION (CHE);TCP DOMAIN PROTEIN 21 (TCP21); (AtTCP11);TCP DOMAIN PROTEIN 11 (TCP11)"]
["AT1G73980","yellow","TTM1 is a triphosphate tunnel metalloenzyme that displays pyrophosphatase activity. It contains both a uridine kinase (UK) domain,CYTH domain, a coiled-coil domain and a transmembrane domain at the C-terminal Mutants show a delay in leaf senescence. Can functionally complement TTM1 and vise versa. (PMID:28733390)","TRIPHOSPHATE TUNNEL METALLOENZYME 1 (TTM1)","(ATTTM1);TRIPHOSPHATE TUNNEL METALLOENZYME 1 (TTM1)"]
["AT3G54320","yellow","WRINKLED1 encodes transcription factor of the AP2/ERWEBP class. Protein has two plant-specific (AP2/EREB) DNA-binding domains and is involved in the control of storage compound biosynthesis in Arabidopsis. Mutants have wrinkled seed phenotype, due to a defect in the incorporation of sucrose and glucose into triacylglycerols. Transgenic sGsL plants (21-day-old) grown on 6% sucrose for 24 hours had 2-fold increase in levels of expressions (sGsL line carries a single copy of T-DNA containing the Spomin::GUS-Spomin::LUC dual reporter genes in the upper arm of chromosome 5 of ecotype Col-0. The sporamin .minimal. promoter directs sugar-inducible expression of the LUC and GUS reporters in leaves). Regulation by LEC2 promotes fatty acid accumulation during seed maturation. Splice form 3 is the major form expressed in seedlings.Mutations in the C terminal intrinsically disordered region increase the stability of WRI1 and lead to increased oil production.","WRINKLED 1 (WRI1)","(ATWRI1);ACTIVATOR OF SPO(MIN)::LUC1 (ASML1);WRINKLED (WRI);WRINKLED 1 (WRI1)"]
["AT3G59660","yellow","Encodes a C2-GRAM domain-containing protein that is induced by B. cinerea infection. It is required for cleavage of BAG6 and thus plays a role in mediating resistance to fungal infection.","(BAGP1)","(BAGP1)"]
["AT1G50700","yellow","Member of Calcium Dependent Protein Kinase. Mediates Strigolactone-Induced Stomatal Closure. Phosphorylates the Ser860 residue of GLR3.7.","(CDPK3)","(CDPK3)"]
["AT2G21770","yellow","cellulose synthase, related to CESA6.","CELLULOSE SYNTHASE A9 (CESA9)","(CESA09);CELLULOSE SYNTHASE A9 (CESA9)"]
["AT3G30180","yellow","Encodes a cytochrome p450 enzyme that catalyzes the last reaction in the production of brassinolide. It is capable of converting 6-deoxocastasterone into castasterone, a C-6 oxidation, as well as the further conversion of castasterone into brassinolide by a Baeyer-Villinger oxidation reaction at C-6, resulting in the formation of an unusual seven-membered lactone ring. The enzyme possesses high affinity for both C28- and C27-Brassinosteroids. The expression of the gene using a CYP85A2 promoter:LUC fusion construct was shown to be under circadian and light control.","BRASSINOSTEROID-6-OXIDASE 2 (BR6OX2)","(CYP85A2);BRASSINOSTEROID-6-OXIDASE 2 (BR6OX2)"]
["AT5G58860","yellow","Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed significantly only in root tissue.","CYTOCHROME P450, FAMILY 86, SUBFAMILY A, POLYPEPTIDE 1 (CYP86A1)","(CYP86);HYDROXYLASE OF ROOT SUBERIZED TISSUE (HORST);CYTOCHROME P450, FAMILY 86, SUBFAMILY A, POLYPEPTIDE 1 (CYP86A1)"]
["AT1G62500","yellow","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)","(DEG27)","(DEG27)"]
["AT1G64620","yellow","Plant-specific Dof transcription factor which regulates vascular cell differentiation and lignin biosynthesis.","(DOF1.8)","(DOF1.8); (VDOF2)"]
["AT5G09300","yellow","e1a2 subunit of branched chain ketoacid dehydrogenase (BCKDH) complex.","(E1A2)","(E1A2)"]
["AT4G39780","yellow","encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.","(ERF60)","(ERF60)"]
["AT4G04760","yellow","Early response to dehydration six-like (ESL) family member.","(ESL3.03)","(ESL3.03)"]
["AT3G21730","yellow","Dihydroneopterin aldolase;(source:Araport11)","(FOLB3)","(FOLB3)"]
["AT4G12790","yellow","GPN GTPase involved in selective nuclear import of RNA polymerase II.","(GPN3)","(GPN3)"]
["AT5G02560","yellow","Encodes HTA12, a histone H2A protein.","HISTONE H2A 12 (HTA12)","(H2A.W.12);HISTONE H2A 12 (HTA12)"]
["AT1G56170","yellow","Encodes a protein with similarity to a subunit of the CCAAT promoter motif binding complex of yeast.One of two members of this class (HAP5B) and expressed in vegetative and reproductive tissues. Involved in the regulation of response to nutrient levels.","NUCLEAR FACTOR Y, SUBUNIT C2 (NF-YC2)","(HAP5B); (ATHAP5B);NUCLEAR FACTOR Y, SUBUNIT C2 (NF-YC2)"]
["AT4G37790","yellow","Encodes homeobox protein HAT22, member of the HD-Zip II family. The mRNA is cell-to-cell mobile.","(HAT22)","(HAT22);ABA INSENSITIVE GROWTH 1 (ABIG1);BRASSINOSTEROID-RELATED HOMEOBOX 3 (BHB3)"]
["AT3G22400","yellow","Encodes lipoxygenase5 (LOX5). LOX5 activity in roots facilitates green peach aphid colonization of Arabidopsis foliage by promoting green peach aphid feeding from sieve element and water consumption from xylem.","(LOX5)","(LOX5);ARABIDOPSIS THALIANA LIPOXYGENASE 5 (ATLOX5)"]
["AT1G18360","yellow","alpha/beta-Hydrolases superfamily protein;(source:Araport11)","(MAGL2)","(MAGL2)"]
["AT2G39400","yellow","alpha/beta-Hydrolases superfamily protein;(source:Araport11)","(MAGL6)","(MAGL6)"]
["AT2G14170","yellow","Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase","ALDEHYDE DEHYDROGENASE 6B2 (ALDH6B2)","(MMSD);ALDEHYDE DEHYDROGENASE 6B2 (ALDH6B2)"]
["AT1G77660","yellow","Phosphatidylinositol 4-phosphate 5-kinase (PIP5K) enzyme family member.","(MORN4)","(MORN4)"]
["AT1G80900","yellow","Transmembrane magnesium transporter. One of nine family members.","MAGNESIUM TRANSPORTER 1 (MGT1)","(MRS2-10);MAGNESIUM TRANSPORTER 1 (MGT1);MAGNESIUM TRANSPORTER 1 (ATMGT1)"]
["AT5G60170","yellow","E3 ligase involved in regulation of chloroplast protein synthesis through activity of PGR3.","(NOT4A)","(NOT4A)"]
["AT3G16980","yellow","One of two highly similar, non-catalytic subunits common to nuclear DNA-directed RNA polymerases II, IV and V; homologous to budding yeast RPB9. Appears to be redundant with At4g16265","(NRPB9A)","(NRPB9A); (NRPD9A); (NRPE9A)"]
["AT1G63020","yellow","Encodes one of two alternative largest subunits of a putative plant-specific RNA polymerase IV (aka RNA polymerase D). Required for posttranscriptional gene silencing.","NUCLEAR RNA POLYMERASE D1A (NRPD1A)","(NRPD1); (POLIV); (SDE4);NUCLEAR RNA POLYMERASE D 1A (Pol IVa);NUCLEAR RNA POLYMERASE D1A (NRPD1A);SILENCING MOVEMENT DEFICIENT 2 (SMD2)"]
["AT3G61690","yellow","Putative TNAase","(NTP8)","(NTP8)"]
["AT3G57990","yellow","Encodes a ?-barrel protein, named OEP40, locates in in the outer envelope of chloroplasts, and functions as a solute channel which is selectively permeable for glucose.","(OEP40)","(OEP40)"]
["AT5G50020","yellow","DHHC-type zinc finger family protein;(source:Araport11)","(PAT9)","(PAT9)"]
["AT5G07500","yellow","Encodes an embryo-specific zinc finger transcription factor required for heart-stage embryo formation.","(PEI1)","(PEI1); (ATC3H54); (ATTZF6);TANDEM CCCH ZINC FINGER PROTEIN 6 (TZF6)"]
["AT4G23400","yellow","Plasma membrane intrinsic protein, involved redundantly with PIP1;1/2/3/4 in hydraulics and carbon fixation, regulates the expression of related genes that affect plant growth and development.","PLASMA MEMBRANE INTRINSIC PROTEIN 1;5 (PIP1;5)","(PIP1D);PLASMA MEMBRANE INTRINSIC PROTEIN 1;5 (PIP1;5)"]
["AT5G20860","yellow","Pectin methylesterase inhibitor; INVI-PMEI protein isoform which clustered with a PME.","(PMEI-PME54)","(PMEI-PME54)"]
["AT5G51490","yellow","Pectin methylesterase inhibitor; INVI-PMEI protein isoform which clustered with a PME.","(PMEI-PME59)","(PMEI-PME59)"]
["AT3G05010","yellow","Encodes a candidate G-protein Coupled Receptor that is involved in the regulation of root growth by bacterial N-acyl-homoserine lactones (AHLs) and plays a role in mediating interactions between plants and microbes.","CANDIDATE G-PROTEIN COUPLED RECEPTOR 2 (CAND2)","(PMTR1);CANDIDATE G-PROTEIN COUPLED RECEPTOR 2 (CAND2)"]
["AT5G42180","yellow","Peroxidase required for casparian strip lignification as well as partially required for SGN-dependent compensatory lignification.","PEROXIDASE 64 (PER64)","(PRX64);PEROXIDASE 64 (PER64)"]
["AT2G35050","yellow","Raf-like kinase required for stomatal vapor pressure difference response.","(RAF24)","(RAF24)"]
["AT4G35740","yellow","Encodes RECQ3, an ATP-dependent helicase.","(RecQl3)","(RecQl3);A. THALIANA RECQ HELICASE 3 (ATRECQ3)"]
["AT1G16590","yellow","putative translesion synthesis polymerase zeta subunit, homologous to Y-family DNA polymerases, contains BRCT domain. Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS).","(REV7)","(REV7); (ATREV7)"]
["AT1G54840","yellow","Encodes an atypical member of the sHSP20 family that is involved in histone demethylation. Loss of function mutations show increased methylation. IMD2 co-localizes to the nucleus with, and physically interacts with, IMD1, a protein involved in RNA directed DNA methylation. IMD2 contains an alpha crystallin domain , that is required for its function.","INCREASED DNA METHYLATION 2 (IDM2)","(ROS5);INCREASED DNA METHYLATION 2 (IDM2)"]
["AT3G55240","yellow","Overexpression leads to PEL (Pseudo-Etiolation in Light) phenotype.","(RPGE3)","(RPGE3)"]
["AT4G13460","yellow","Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation.","SU(VAR)3-9 HOMOLOG 9 (SUVH9)","(SET22);SU(VAR)3-9 HOMOLOG 9 (SUVH9); (SUVH9);SETDOMAIN GROUP 22 (SDG22)"]
["AT3G13672","yellow","SINAT homolog with truncated RING finger and zinc finger domains.","(SINA2)","(SINA2); (SINAT6)"]
["AT3G03590","yellow","SWIB/MDM2 domain superfamily protein;(source:Araport11)","(SWIB4)","(SWIB4)"]
["AT5G04220","yellow","Encodes a protein specifically localized to the ER-PM boundary with similarity to synaptotagmins. AT5G04220.2 has been identified as the functional transcript (PMID:33944955).Acts redundantly with SYTA/SYT1 in ER-PM tethering and maintaining PM integrity in response to abiotic stress.","(SYTC)","(SYTC); (ATSYTC);SYNAPTOTAGMIN 3 (SYT3); (NTMC2T1.3); (NTMC2TYPE1.3)"]
["AT5G65540","yellow","transcription initiation factor TFIID subunit;(source:Araport11)","(TAFL)","(TAFL)"]
["AT3G46220","yellow","E3 ligase that mediates ufmylation. Part of complex with C53 and the ER-resident adaptor protein DDRGK1. Involved in the pathway that links ribosome-associated quality control with selective autophagy at the ER.","(UFL1)","(UFL1)"]
["AT1G06000","yellow","encodes a flavonol-7-O-rhamnosyltransferase involved in the formation of rhamnosylated flavonols","(UGT89C1)","(UGT89C1)"]
["AT3G55600","yellow","SNARE protein located in ER/Golgi.","(USE12)","(USE12)"]
["AT1G58440","yellow","Encodes a squalene monooxygenase.","(XF1)","(XF1);SQUALENE EPOXIDASE 1 (SQE1);DROUGHT HYPERSENSITIVE 2 (DRY2)"]
["AT5G11380","yellow","Encodes a protein postulated to have 1-deoxy-D-xylulose 5-phosphate synthase activity.","1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 3 (DXPS3)","1-DEOXY-D-XYLULOSE 5-PHOSPHATE SYNTHASE 3 (DXPS3);1-DEOXY-D-XYLULOSE 5-PHOSPHATE (DXP) SYNTHASE 3 (DXS3)"]
["AT2G26800","yellow","Mutant has increased seed ile, leu and val as well as his and arg.","3-HYDROXY-3-METHYLGLUTARYL-COA (HMGCOA) LYASE (HGML)","3-HYDROXY-3-METHYLGLUTARYL-COA (HMGCOA) LYASE (HGML)"]
["AT2G28630","yellow","Encodes KCS12, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","3-KETOACYL-COA SYNTHASE 12 (KCS12)","3-KETOACYL-COA SYNTHASE 12 (KCS12)"]
["AT1G51680","yellow","encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. In addition to 4-coumarate, it also converts ferulate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, ferulic acid, caffeic acid and 5-OH-ferulic acid. At4CL1 was unable to use sinapic acid as substrate.","4-COUMARATE:COA LIGASE 1 (4CL1)","4-COUMARATE:COA LIGASE 1 (4CL1);4-COUMARATE:COA LIGASE 1 (4CL.1);ARABIDOPSIS THALIANA 4-COUMARATE:COA LIGASE 1 (AT4CL1)"]
["AT3G21240","yellow","encodes an isoform of 4-coumarate:CoA ligase (4CL), which is involved in the last step of the general phenylpropanoid pathway. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, ferulic acid, 5-OH-ferulic acid and cinnamic acid. At4CL2 was unable to use sinapic acid as substrate.","4-COUMARATE:COA LIGASE 2 (4CL2)","4-COUMARATE:COA LIGASE 2 (4CL2); (AT4CL2)"]
["AT3G21230","yellow","The gene encodes a 4-coumarate coenzyme A ligase being able to use sinapate as substrate. The catalytic efficiency was in the following (descending) order: p-coumaric acid, caffeic acid, 5-OH-ferulic acid, ferulic acid and sinapic acid. At4CL5 was unable to use cinnamic acid as substrate. Knockout of At4CL5 (4cl5) revealed no effect on syringyl lignin content indicating that the activity observed does probably not occur in vivo.","4-COUMARATE:COA LIGASE 5 (4CL5)","4-COUMARATE:COA LIGASE 5 (4CL5)"]
["AT5G58787","yellow","Encodes a cytosolic protein with E3 ligase activity that is involved in positive regulation of ABA responses.","ABA INSENSITIVE RING PROTEIN 4 (ATAIRP4)","ABA INSENSITIVE RING PROTEIN 4 (ATAIRP4)"]
["AT2G46225","yellow","Encodes a subunit of the WAVE complex. The WAVE complex is required for activation of ARP2/3 complex which functions in actin microfilament nucleation and branching. One of four ABI-like proteins.","ABI-1-LIKE 1 (ABIL1)","ABI-1-LIKE 1 (ABIL1)"]
["AT4G37000","yellow","Mutants have spontaneous spreading cell death lesions and constitutive activation of defenses in the absence of pathogen infection. Its product was shown to display red chlorophyll catabolite reductase (RCCR), which catalyzes one step in the breakdown of the porphyrin component of chlorophyll. The enzyme was further assessed to be a Type-1 (pFCC-1-producing) RCCR.Upon P. syringae infection, ACD2 localization shifts from being largely in chloroplasts to partitioning to chloroplasts, mitochondria, and to a small extent, cytosol. Overexpression of ACD2 delayed cell death and the replication of P. syringae.","ACCELERATED CELL DEATH 2 (ACD2)","ACCELERATED CELL DEATH 2 (ACD2);ARABIDOPSIS THALIANA RED CHLOROPHYLL CATABOLITE REDUCTASE (ATRCCR)"]
["AT3G16170","yellow","Encodes a malonyl-CoA synthetase that is localized to the cytosol and mitochondrion. AAE13 produces two transcripts one of which includes an N terminal mitochondrial targeting motif. Loss of function of the mtAAE13 product results in growth arrest and lethality.","ACYL ACTIVATING ENZYME 13 (AAE13)","ACYL ACTIVATING ENZYME 13 (AAE13)"]
["AT1G77240","yellow","AMP-dependent synthetase and ligase family protein;(source:Araport11)","ACYL ACTIVATING ENZYME 2 (AAE2)","ACYL ACTIVATING ENZYME 2 (AAE2)"]
["AT1G10730","yellow","Part of adaptor protein (AP) complex which mediadates clathrin-dependent trafficking at the trans-Golgi network (TGN) and the plasma membrane, respectively. Required for trafficking to plasma membrane and vacuoles.","ADAPTOR PROTEIN-1 MU-ADAPTIN 1 (AP1M1)","ADAPTOR PROTEIN-1 MU-ADAPTIN 1 (AP1M1)"]
["AT1G80050","yellow","Encodes an adenosine phosphoribosyl transferase(E.C:2.4.2.7), a constitutively expressed enzyme involved in the one-step salvage of adenine to AMP. This isozyme has high affinity for cytokinins and is likely to be localized to the cytosol.","ADENINE PHOSPHORIBOSYL TRANSFERASE 2 (APT2)","ADENINE PHOSPHORIBOSYL TRANSFERASE 2 (APT2); (ATAPT2); (PHT1.1)"]
["AT3G12740","yellow","Physically interacts with ALA3, and is required for the phospholipid translocase activity of ALA3. The mRNA is cell-to-cell mobile.","ALA-INTERACTING SUBUNIT 1 (ALIS1)","ALA-INTERACTING SUBUNIT 1 (ALIS1)"]
["AT2G25940","yellow","Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions.","ALPHA-VACUOLAR PROCESSING ENZYME (ALPHA-VPE)","ALPHA-VACUOLAR PROCESSING ENZYME (ALPHA-VPE); (ALPHAVPE);ASPARAGINYL ENDOPEPTIDASE 1 (AEP1)"]
["AT1G68370","yellow","DnaJ-like protein with homology to coiled coils found in cytoskeleton-interacting proteins.","ALTERED RESPONSE TO GRAVITY 1 (ARG1)","ALTERED RESPONSE TO GRAVITY 1 (ARG1)"]
["AT3G25585","yellow","aminoalcoholphosphotransferase (AAPT2)","AMINOALCOHOLPHOSPHOTRANSFERASE (AAPT2)","AMINOALCOHOLPHOSPHOTRANSFERASE (AAPT2); (ATAAPT2)"]
["AT1G68710","yellow","ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein;(source:Araport11)","AMINOPHOSPHOLIPID ATPASE 9 (ALA9)","AMINOPHOSPHOLIPID ATPASE 9 (ALA9)"]
["AT5G18120","yellow","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily. This protein also belongs to the adenosine 5'-phosphosulfate reductase-like (APRL) group.","APR-LIKE 7 (APRL7)","APR-LIKE 7 (APRL7);APR-LIKE 7 (ATAPRL7)"]
["AT5G63760","yellow","RING/U-box superfamily protein;(source:Araport11)","ARIADNE 15 (ARI15)","ARABIDOPSIS ARIADNE 15 (ATARI15);ARIADNE 15 (ARI15)"]
["AT5G20635","yellow","Encodes an atypical heterotrimeric G-protein gamma-subunit involved in guard cell K+-channel regulation and morphological development.","ARABIDOPSIS G PROTEIN GAMMA SUBUNIT 3 (AGG3)","ARABIDOPSIS G PROTEIN GAMMA SUBUNIT 3 (AGG3)"]
["AT2G01830","yellow","Histidine kinase: cytokinin-binding receptor that transduces cytokinin signals across the plasma membrane","WOODEN LEG (WOL)","ARABIDOPSIS HISTIDINE KINASE 4 (AHK4);WOODEN LEG 1 (WOL1);CYTOKININ RESPONSE 1 (CRE1);WOODEN LEG (WOL); (ATCRE1)"]
["AT1G79610","yellow","Encodes an endosomal Na(+)/H(+) antiporter: AT1G54370 (NHX5), AT1G79610 (NHX6). Double knockout nhx5 nhx6 showed reduced growth, with smaller and fewer cells and increased sensitivity to salinity.","NA+/H+ ANTIPORTER 6 (NHX6)","ARABIDOPSIS NA+/H+ ANTIPORTER 6 (ATNHX6);NA+/H+ ANTIPORTER 6 (NHX6)"]
["AT5G24590","yellow","Member of NAc protein family. Interacts with turnip crinkle virus (TCV) capsid protein. Transcription factor involved in regulating the defense response of Arabidopsis to TCV.","TCV-INTERACTING PROTEIN (TIP)","ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 91 (ANAC091); (NAC091); (ANAC91);TCV-INTERACTING PROTEIN (TIP)"]
["AT1G08250","yellow","Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Although this enzyme has sequence similarity to prephenate dehydratases, it is 98 times more active with arogenate than prephenate in enzymatic assays.","AROGENATE DEHYDRATASE 6 (ADT6)","ARABIDOPSIS THALIANA AROGENATE DEHYDRATASE 6 (AtADT6);AROGENATE DEHYDRATASE 6 (ADT6)"]
["AT4G31770","yellow","Encodes a RNA lariat debranching enzyme required for embryogenesis.","DEBRANCHING ENZYME 1 (DBR1)","ARABIDOPSIS THALIANA DEBRANCHING ENZYME 1 (ATDBR1);DEBRANCHING ENZYME 1 (DBR1)"]
["AT1G12430","yellow","Encodes the kinesin-like protein PAK has an Armadillo motif tail and is involved in guard cell development in Arabidopsis (from Genbank record AF159052).However, no defect in stomatal complexes has been observed in loss of function mutations. It accumulates at the preprophase band (PPB) in a cell-cycle and microtubule-dependent manner and is most highly expressed in cells where the placement of the division plane (early embryogenesis, stomatal lineages) is critical.","ARMADILLO REPEAT KINESIN 3 (ARK3)","ARABIDOPSIS THALIANA KINESIN UNGROUPED CLADE, GENE A (AtKINUa);ARMADILLO REPEAT KINESIN 3 (ARK3)"]
["AT1G48050","yellow","Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity. Binds double stranded DNA breaks as a heterodimer with Ku70, involved in non-homologous end joining repair. Mutants are defective in T-DNA integration. Over expression confers increased resistance to DNA damage agents and increased susceptibility to T-DNA transformation.","(KU80)","ARABIDOPSIS THALIANA KU80 HOMOLOG (ATKU80); (KU80)"]
["AT5G54280","yellow","Type VII myosin gene","MYOSIN 2 (ATM2)","ARABIDOPSIS THALIANA MYOSIN 1 (ATMYOS1);ARABIDOPSIS THALIANA MYOSIN 4 (ATM4);MYOSIN 2 (ATM2)"]
["AT4G11980","yellow","nudix hydrolase homolog 14;(source:Araport11)","NUDIX HYDROLASE HOMOLOG 14 (NUDX14)","ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 14 (atnudt14);NUDIX HYDROLASE HOMOLOG 14 (ATNUDX14);NUDIX HYDROLASE HOMOLOG 14 (NUDX14)"]
["AT1G55970","yellow","HAC4 is most likely to be an expressed pseudogene that lacks HAT function. there is a single nucleotide deletion in both the HAC4 genomic and cDNA sequences relative to its homologs. The resulting frameshift within the open reading frame causes a stop codon to occur within the predicted acetyltransferase catalytic domain.","HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 4 (HAC4)","ARABIDOPSIS THALIANA P300/CBP ACETYLTRANSFERASE-RELATED PROTEIN 2 (ATHPCAT2);HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 6 (HAC6);HISTONE ACETYLTRANSFERASE OF THE GNAT/MYST SUPERFAMILY 4 (HAG4);HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 4 (HAC4);HISTONE ACETYLTRANSFERASE OF THE GNAT/MYST SUPERFAMILY 04 (HAG04); (HAC02); (HAC04)"]
["AT3G46620","yellow","Encodes an ABA- and drought-induced RING-DUF1117 gene whose mutation results in hyposensitive phenotypes toward ABA in terms of germination rate and stomatal closure and markedly reduced tolerance to drought stress relative to wild-type plants.","RING AND DOMAIN OF UNKNOWN FUNCTION 1117 1 (RDUF1)","ARABIDOPSIS THALIANA RING AND DOMAIN OF UNKNOWN FUNCTION 1117 1 (ATRDUF1);RING AND DOMAIN OF UNKNOWN FUNCTION 1117 1 (RDUF1);BCA2A ZINC FINGER ATL 10 (BTL10)"]
["AT5G07000","yellow","Encodes a member of the sulfotransferase family of proteins. Although it has 85% amino acid identity with ST2A (At5g07010), this protein is not able to transfer a sulfate group to 11- or 12-hydroxyjasmonic acid in vitro. It may be able to act on structurally related jasmonates.","SULFOTRANSFERASE 2B (ST2B)","ARABIDOPSIS THALIANA SULFOTRANSFERASE 2B (ATST2B);SULFOTRANSFERASE 2B (ST2B)"]
["AT3G19770","yellow","Guanine nucleotide exchange factor VPS9a. Can activate all Rab5 members to GTP-bound forms in vitro. Required for embryogenesis. Regulates the localization of ARA7 and ARA6. Involved in postembryonic root development.","(VPS9A)","ARABIDOPSIS THALIANA VACUOLAR PROTEIN SORTING 9A (AtVPS9A); (VPS9A); (VPS9)"]
["AT1G05830","yellow","Encodes a homolog of trithorax, a histone-lysine N-methyltransferase. Paralog of ATX1. Unlike ATX1 which is involved in trimethylating of histone H3-mysine 4, ATX2 is involved in dimethylating of histone H3-lysine 4. ATX1 and ATX2 influence the expression of largely nonoverlapping gene sets. The expression pattern of ATX2 is also different from that of ATX1.","ARABIDOPSIS TRITHORAX 2 (ATX2)","ARABIDOPSIS TRITHORAX 2 (ATX2);SET DOMAIN PROTEIN 30 (SDG30)"]
["AT3G11240","yellow","Encodes an arginyl-tRNA:protein arginyltransferase (ATE2), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. ATE2 has also been show to be involved in the response to pathogens.","ARGININE-TRNA PROTEIN TRANSFERASE 2 (ATE2)","ARGININE-TRNA PROTEIN TRANSFERASE 2 (ATE2); (ATATE2)"]
["AT2G27040","yellow","AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation, abnormal ovule/megagametophyte develoment and increased susceptibility to bacterial pathogens including Tobacco rattle virus.","ARGONAUTE 4 (AGO4)","ARGONAUTE 4 (AGO4);OVEREXPRESSOR OF CATIONIC PEROXIDASE 11 (OCP11)"]
["AT2G16090","yellow","RING/U-box superfamily protein;(source:Araport11)","ARIADNE 2 (ARI2)","ARIADNE 2 (ARI2);ARABIDOPSIS ARIADNE 2 (ATARI2);ARABIDOPSIS ARIADNE 12 (ATARI12);ARIADNE 12 (ARI12)"]
["AT1G62800","yellow","Encodes aspartate aminotransferase (Asp4).","ASPARTATE AMINOTRANSFERASE 4 (ASP4)","ASPARTATE AMINOTRANSFERASE 4 (ASP4)"]
["AT3G18490","yellow","Encodes ASPG1 (ASPARTIC PROTEASE IN GUARD CELL 1). Functions in drought avoidance through abscisic acid (ABA) signalling in guard cells.","ASPARTIC PROTEASE IN GUARD CELL 1 (ASPG1)","ASPARTIC PROTEASE IN GUARD CELL 1 (ASPG1)"]
["AT4G12080","yellow","AT-hook motif nuclear-localized protein 1;(source:Araport11)","AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 (AHL1)","AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 (AHL1); (ATAHL1)"]
["AT2G41700","yellow","ATP-binding cassette A1;(source:Araport11)","ATP-BINDING CASSETTE A1 (ABCA1)","ATP-BINDING CASSETTE A1 (ABCA1);ARABIDOPSIS THALIANA ATP-BINDING CASSETTE A1 (AtABCA1)"]
["AT1G53270","yellow","ABC-2 type transporter family protein;(source:Araport11)","ATP-BINDING CASSETTE G10 (ABCG10)","ATP-BINDING CASSETTE G10 (ABCG10)"]
["AT4G26160","yellow","Encodes a member of the thioredoxin family protein. Located in the chloroplast. Shows high activity towards the chloroplast 2-Cys peroxiredoxin A, and poor activity towards the chloroplast NADP-malate dehydrogenase.","ATYPICAL CYS HIS RICH THIOREDOXIN 1 (ACHT1)","ATYPICAL CYS HIS RICH THIOREDOXIN 1 (ACHT1)"]
["AT3G13970","yellow","Autophagy protein.","AUTOPHAGY 12 B (APG12B)","AUTOPHAGY 12 (APG12);AUTOPHAGY 12 B (APG12B);AUTOPHAGY 12B (ATG12B)"]
["AT1G62040","yellow","Autophagy protein.","AUTOPHAGY 8C (ATG8C)","AUTOPHAGY 8C (ATG8C)"]
["AT3G28450","yellow","Negative regulator of pattern-triggered immunity in complex with BIR3 and PLD&#947;1.","BAK1-INTERACTING RECEPTOR-LIKE KINASE 2 (BIR2)","BAK1-INTERACTING RECEPTOR-LIKE KINASE 2 (BIR2)"]
["AT1G61720","yellow","Negative regulator of flavonoid biosynthesis, mutants accumulate flavonoid pigments in their seed coat, putative oxidoreductase. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium.","BANYULS (BAN)","BANYULS (BAN)"]
["AT2G35530","yellow","Encodes a G group bZIP transcription factor family member that can bind cis elements with an ACGT core, such as G-box, Hex, C-box and As-1. The protein is localized in the nucleus and can homodimerize and can heterodimerize with other G group members.","BASIC REGION/LEUCINE ZIPPER TRANSCRIPTION FACTOR 16 (bZIP16)","BASIC REGION/LEUCINE ZIPPER TRANSCRIPTION FACTOR 16 (bZIP16); (AtbZIP16)"]
["AT4G36870","yellow","Encodes a member of the BEL family of homeodomain proteins. Plants doubly mutant for saw1/saw2 (blh2/blh4) have serrated leaves. BP is expressed in the serrated leaves, therefore saw1/saw2 may act redundantly to repress BP in leaves. Regulates together with BLH4 demethylesterification of homogalacturonan in seed mucilage.","BEL1-LIKE HOMEODOMAIN 2 (BLH2)","BEL1-LIKE HOMEODOMAIN 2 (BLH2);SAWTOOTH 1 (SAW1)"]
["AT5G41410","yellow","Homeodomain protein required for ovule identity.Loss of function mutations show homeotic conversion of integuments to carpels.Forms heterodimers with STM and KNAT1. Interacts with AG-SEP heterodimers is thought to restrict WUS expression. BEL interacts with MADS box dimers composed of SEP1(or SEP3) and AG, SHP1, SHP2 and STK. The interaction of BEL1 with AG-SEP3 is required for proper integument development and specification of integument identity.","BELL 1 (BEL1)","BELL 1 (BEL1)"]
["AT1G65880","yellow","Encodes a benzoate-CoA ligase. Involved in the biosynthesis of benzoyloxyglucosinolate in Arabidopsis seeds.","BENZOYLOXYGLUCOSINOLATE 1 (BZO1)","BENZOYLOXYGLUCOSINOLATE 1 (BZO1)"]
["AT2G44470","yellow","beta glucosidase 29;(source:Araport11)","BETA GLUCOSIDASE 29 (BGLU29)","BETA GLUCOSIDASE 29 (BGLU29)"]
["AT3G23980","yellow","Encodes a protein that interacts with the Polycomb-group (Pc-G) histone methyltransferase CLF (CURLY LEAF). It colocalizes with CLF to the nucleus and represses a subset of Pc-G target genes. The pleiotropic developmental mutant phenotype suggests that BLI prevents premature differentiation.","BLISTER (BLI)","BLISTER (BLI);KOLD SENSITIV 1 (KOS1)"]
["AT1G14340","yellow","ACD11 binding partner, negatively regulates ROS-mediated defense response.","BPA1-LIKE 3 (BPL3)","BPA1-LIKE 3 (BPL3)"]
["AT1G50110","yellow","Encodes a cytosolic branched-chain aminotransferase that acts on Leu, Ile, Val and also on Met. Together with BCAT4 and BCAT3, it is involved in methionine salvage and glucosinolate biosynthesis.","BRANCHED-CHAIN AMINOTRANSFERASE 6 (BCAT6)","BRANCHED-CHAIN AMINOTRANSFERASE 6 (BCAT6)"]
["AT5G55040","yellow","DNA-binding bromodomain-containing protein, interacts with core SWI/SNF complex components.Identified as a specific subunit of BRM-associated SWI/SNF (BAS) complexes (PMID:36471048).","BROMODOMAIN-CONTAINING PROTEIN 13 (BRD13)","BROMODOMAIN-CONTAINING PROTEIN 13 (BRD13)"]
["AT4G26220","yellow","Encodes a caffeoyl-coenzyme A O-methyltransferase (CCoAOMT)-like protein with a strong preference for methylating the para position of flavanones and dihydroflavonols, whereas flavones and flavonols are methylated in the meta-position.","CAFFEOYL COENZYME A ESTER O-METHYLTRANSFERASE 7 (CCOAOMT7)","CAFFEOYL COENZYME A ESTER O-METHYLTRANSFERASE 7 (CCOAOMT7)"]
["AT4G22120","yellow","Calcium-permeable stretch activated cation channel.","CALCIUM PERMEABLE STRESS-GATED CATION CHANNEL 1 (CSC1)","CALCIUM PERMEABLE STRESS-GATED CATION CHANNEL 1 (CSC1);REDUCED HYPEROSMOLALITY-INDUCED CA2+ INCREASE 1.2 (OSCA1.2)"]
["AT5G44100","yellow","Member of CKL gene family. Expression up-regulated under high temperature in anthers. Transcription activated by MYB24.","CASEIN KINASE I-LIKE 7 (ckl7)","CASEIN KINASE I-LIKE 7 (ckl7)"]
["AT2G27370","yellow","Together with CASP1, 2, 4, and 5 involved in cell wall lignification.","CASPARIAN STRIP MEMBRANE DOMAIN PROTEIN 3 (CASP3)","CASPARIAN STRIP MEMBRANE DOMAIN PROTEIN 3 (CASP3)"]
["AT4G03540","yellow","Uncharacterized protein family (UPF0497);(source:Araport11)","CASP-LIKE PROTEIN 1C1 (CASPL1C1)","CASP-LIKE PROTEIN 1C1 (CASPL1C1)"]
["AT4G24400","yellow","Encodes a CBL (calcineurin B-like calcium sensor proteins) -interacting serine/threonine protein kinase. Regulates the low-affinity phase of the primary nitrate response. The mRNA is cell-to-cell mobile.","CBL-INTERACTING PROTEIN KINASE 8 (CIPK8)","CBL-INTERACTING PROTEIN KINASE 8 (CIPK8);SNF1-RELATED PROTEIN KINASE 3.13 (SnRK3.13);PROTEIN KINASE 11 (PKS11); (ATCIPK8)"]
["AT1G29820","yellow","Magnesium transporter CorA-like family protein;(source:Araport11)",null,"CELLULOSE SYNTHASE LIKE B4 (CSLB4)"]
["AT1G29810","yellow","Transcriptional coactivator/pterin dehydratase;(source:Araport11)",null,"CELLULOSE SYNTHASE LIKE B5 (F1N18.100)"]
["AT5G63060","yellow","Sec14p like protein involved in chloroplast vesicle transport. Required for photoauxotrophic growth.Various SNPs are associated with genetic diversity of Pi uptake.","CHLOROPLAST-LOCALIZED SEC14- LIKE PROTEIN (CPSFL1)","CHLOROPLAST-LOCALIZED SEC14- LIKE PROTEIN (CPSFL1); (PITP7)"]
["AT4G09760","yellow","encodes a choline synthase whose gene expression is induced by high salt and mannitol.","CHOLINE/ETHANOLAMINE KINASE 3 (CEK3)","CHOLINE/ETHANOLAMINE KINASE 3 (CEK3)"]
["AT3G29200","yellow","L-ascorbate peroxidase","CHORISMATE MUTASE 1 (CM1)","CHORISMATE MUTASE 1 (CM1);ARABIDOPSIS THALIANA CHORISMATE MUTASE 1 (ATCM1)"]
["AT3G58740","yellow","Encodes a peroxisomal citrate synthase that is expressed in siliques and developing seeds.","CITRATE SYNTHASE 1 (CSY1)","CITRATE SYNTHASE 1 (CSY1)"]
["AT1G05490","yellow","Involved in gene silencing. Locus-specific regulator of 24nt-siRNA expression, works together with CLSY1-4 as the master regulators of essentially all Pol-IV-dependent 24nt-siRNAs.","CHROMATIN REMODELING 31 (chr31)","CLASSY3 (CLSY3);CHROMATIN REMODELING 31 (chr31)"]
["AT5G59030","yellow","encodes a putative copper transport protein that contains copper-binding motif and functionally complements in copper-transport defective yeast strains","COPPER TRANSPORTER 1 (COPT1)","COPPER TRANSPORTER 1 (COPT1)"]
["AT5G19380","yellow","Encodes one of the CRT-Like transporters (CLT1/AT5G19380, CLT2/AT4G24460, CLT3/AT5G12170). Required for glutathione homeostasis and stress responses. Mutants lacking these transporters are heavy metal-sensitive, glutathione(GSH)-deficient, and hypersensitive to Phytophthora infection.","CRT (CHLOROQUINE-RESISTANCE TRANSPORTER)-LIKE TRANSPORTER 1 (CLT1)","CRT (CHLOROQUINE-RESISTANCE TRANSPORTER)-LIKE TRANSPORTER 1 (CLT1)"]
["AT5G57940","yellow","Encodes a cyclic GMP activated Ca2+-permeable cation channel in the plasma membrane of guard cells. Required for constitutive growth of root hairs as Ca2+-permeable channels.","CYCLIC NUCLEOTIDE GATED CHANNEL 5 (CNGC5)","CYCLIC NUCLEOTIDE GATED CHANNEL 5 (CNGC5);CYCLIC NUCLEOTIDE GATED CHANNEL 5 (ATCNGC5)"]
["AT5G54250","yellow","member of Cyclic nucleotide gated channel family, downstream component of the signaling pathways leading to HR resistance. mutant plants exhibit gene-for-gene disease resistance against avirulent Pseudomonas syringae despite the near-complete absence of the hypersensitive response (HR). Salicylic acid accumulation in dnd2 mutants is completely PAD4-independent.","CYCLIC NUCLEOTIDE-GATED CATION CHANNEL 4 (CNGC4)","CYCLIC NUCLEOTIDE-GATED CATION CHANNEL 4 (ATCNGC4);CYCLIC NUCLEOTIDE-GATED CATION CHANNEL 4 (CNGC4);DEFENSE, NO DEATH 2 (DND2); (HLM1)"]
["AT4G11320","yellow","Papain family cysteine protease of unknown function.","CYSTEINE PROTEASE 2 (CP2)","CYSTEINE PROTEASE 2 (CP2); (ATCP2)"]
["AT2G34490","yellow","Encodes a protein with C22-sterol desaturase activity. The enzyme was shown to catalyze the conversion of both 24-<i>epi</i>-campesterol and &beta;-sitosterol to brassicasterol and stigmasterol, respectively, in the presence of NADPH.","CYTOCHROME P450, FAMILY 710, SUBFAMILY A, POLYPEPTIDE 2 (CYP710A2)","CYTOCHROME P450, FAMILY 710, SUBFAMILY A, POLYPEPTIDE 2 (CYP710A2)"]
["AT3G44670","yellow","One of a series of RPP1-like, tandemly duplicated Toll-Interleukin1-Receptor- related NLR receptors within the DANGEROUS MIX2 cluster. Interacts genetically with and is downstream of EDS1 in auto immune response.","DANGEROUS MIX2H (DM2H)","DANGEROUS MIX2H (DM2H)"]
["AT3G10010","yellow","Encodes a protein with DNA glycosylase activity that is involved in maintaining methylation marks.","DEMETER-LIKE 2 (DML2)","DEMETER-LIKE 2 (DML2)"]
["AT3G17310","yellow","Encodes DRM3 (Domains Rearranged Methyltransferase3), a catalytically mutated paralog of the cytosine methyltransferase DRM2. Despite being catalytically mutated, DRM3 is required for normal maintenance of non-CG DNA methylation, establishment of RNA-directed DNA methylation triggered by repeat sequences and accumulation of repeat-associated small RNAs.","DOMAINS REARRANGED METHYLTRANSFERASE 3 (DRM3)","DOMAINS REARRANGED METHYLTRANSFERASE 3 (DRM3); (AtDRM3)"]
["AT1G59660","yellow","Encodes a protein with similarity to mammalian nucleoporin Nup98.Its expression is upregulated in mutants that are NUP deficient. Nucleoportin which redundantly inhibits flowering together with Nup98a through multiple pathways including clock, photoperiod, and age pathways. Gates flowering in a CONSTANS (CO)-independent mode and bypasses the CO checkpoint in photoperiodic signaling and integrated signals from multiple pathways to directly target FLOWERING LOCUS T (FT) for flowering control.","DRA2-LIKE (DRAL)","DRA2-LIKE (DRAL); (NUP98B)"]
["AT2G30580","yellow","Encodes a C3HC4 RING-domain-containing ubiquitin E3 ligase capable of interacting with DREB2A. DRIP2 seems to be involved in regulating stress-related transcriptional changes and drought tolerance.","DREB2A-INTERACTING PROTEIN 2 (DRIP2)","DREB2A-INTERACTING PROTEIN 2 (DRIP2); (BMI1A); (ATDRIP2)"]
["AT1G64570","yellow","Homeodomain-like superfamily protein;(source:Araport11)","DUO POLLEN 3 (DUO3)","DUO POLLEN 3 (DUO3)"]
["AT3G50660","yellow","Encodes a 22&#945; hydroxylase whose reaction is a rate-limiting step in brassinosteroid biosynthetic pathway. The protein is a member of CYP90B gene family. The stable clm allele displays a small, compressed rosette, reduced internode length, and reduced fertility, appears in selfed ddm1 mutant plants possibly due to loss of cytosine methylation. Transcripts accumulate in actively growing tissues, and GUS expression is negatively regulated by brassinosteroids. Localized in the endoplasmic reticulum. The in vitro expressed protein can perform the C-22 hydroxylation of a variety of C27-, C28- and C29-sterols. Cholesterol was the best substrate, followed by campesterol. Sitosterol was a poor substrate.","DWARF 4 (DWF4)","DWARF 4 (DWF4);CYTOCHROME P450 90B1 (CYP90B1);CLAM (CLM);SUPPRESSOR OF NPH4 2 (SNP2);SHADE AVOIDANCE 1 (SAV1);PARTIALLY SUPPRESSING COI1 INSENSITIVITY TO JA 1 (PSC1); (ATDWF4)"]
["AT3G16800","yellow","EGR3 functions as a negative regulator of plant growth with prominent effect on plant growth during drought stress, EGR3 regulates microtubule organization and likely affects additional cytoskeleton and trafficking processes along the plasma membrane.","E GROWTH-REGULATING 3 (EGR3)","E GROWTH-REGULATING 3 (EGR3)"]
["AT2G47240","yellow","Encodes an acyl-CoA synthetase that acts on long-chain and very-long-chain fatty acids, involved in cuticular wax and cutin biosynthesis The mRNA is cell-to-cell mobile.","LONG-CHAIN ACYL-COA SYNTHASE 1 (LACS1)","ECERIFERUM 8 (CER8); (CER8);LONG-CHAIN ACYL-COA SYNTHASE 1 (LACS1)"]
["AT2G41830","yellow","Part of a nanodomain complex that tethers PI4K&#945;1 to the plasma membrane.","EFR3 OF PLANT 2 (EFOP2)","EFR3 OF PLANT 2 (EFOP2)"]
["AT5G39360","yellow","EID1-like 2;(source:Araport11)","EID1-LIKE 2 (EDL2)","EID1-LIKE 2 (EDL2)"]
["AT2G06255","yellow","DUF1313 domain containing protein.","ELF4-LIKE 3 (ELF4-L3)","ELF4-LIKE 3 (EFL3);ELF4-LIKE 3 (ELF4-L3)"]
["AT5G23940","yellow","Encodes PERMEABLE LEAVES3 (PEL3), a putative acyl-transferase. Mutation in this locus results in altered trichome phenotype (trcichomes become tangled during leaf expansion). Additional phenotype includes altered cuticle layer.","PERMEABLE LEAVES3 (PEL3)","EMBRYO DEFECTIVE 3009 (EMB3009);DEFECTIVE IN CUTICULAR RIDGES (DCR);PERMEABLE LEAVES3 (PEL3)"]
["AT2G01860","yellow","Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)","EMBRYO DEFECTIVE 975 (EMB975)","EMBRYO DEFECTIVE 975 (EMB975); (CYK8)"]
["AT4G14040","yellow","selenium-binding protein 2;(source:Araport11)","SELENIUM-BINDING PROTEIN 2 (SBP2)","EMBRYO SAC DEVELOPMENT ARREST 38 (EDA38);SELENIUM-BINDING PROTEIN 2 (SBP2)"]
["AT5G51230","yellow","Polycomb group protein with zinc finger domain involved in negative regulation of reproductive development. Forms a complex with FIE, CLF, and MSI1. This complex modulates the expression of target genes including AG, PI and AP3.","EMBRYONIC FLOWER 2 (EMF2)","EMBRYONIC FLOWER 2 (EMF2); (AtEMF2); (CYR1);CYTOKININ RESISTANT 1 (VEF2)"]
["AT3G42660","yellow","Ctf4 related nuclear protein. Interacts with LHP1-PRC2 to maintain H3K27 methylation in rapidly dividing cells. EOL1 expression is restricted to rapidly dividing cells.","ENHANCER OF LHP1 (EOL1)","ENHANCER OF LHP1 (EOL1)"]
["AT1G05160","yellow","Encodes an ent-kaurenoic acid hydroxylase, a member of the CYP88A cytochrome p450 family.","CYTOCHROME P450, FAMILY 88, SUBFAMILY A, POLYPEPTIDE 3 (CYP88A3)","ENT-KAURENOIC ACID OXYDASE 1 (KAO1); (ATKAO1);CYTOCHROME P450, FAMILY 88, SUBFAMILY A, POLYPEPTIDE 3 (CYP88A3)"]
["AT4G05120","yellow","Encodes an equilibrative nucleoside transporter AtENT3. Mutations of this locus allow mutants to grow on uridine analogue fluorouridine.","FUDR RESISTANT 1 (FUR1)","EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 3 (ENT3);FUDR RESISTANT 1 (FUR1); (ATENT3)"]
["AT4G34520","yellow","Encodes KCS18, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).","3-KETOACYL-COA SYNTHASE 18 (KCS18)","FATTY ACID ELONGATION1 (FAE1);3-KETOACYL-COA SYNTHASE 18 (KCS18)"]
["AT3G08040","yellow","Encodes a member of the MATE (multidrug and toxin efflux family), expressed in roots but not shoots. Mutants accumulate excess iron, manganese and zinc, and express root Fe(III) chelatase activity even under iron sufficiency conditions. FRD3 is likely to function in root xylem loading of an iron chelator or other factor necessary for efficient iron uptake out of the xylem or apoplastic space and into leaf cells.","FERRIC REDUCTASE DEFECTIVE 3 (FRD3)","FERRIC REDUCTASE DEFECTIVE 3 (FRD3);MANGANESE ACCUMULATOR 1 (MAN1); (ATFRD3)"]
["AT5G49740","yellow","Encodes a chloroplast ferric chelate reductase. Shows differential splicing and has three different mRNA products. Expressed in the shoot, flower and cotyledon.","FERRIC REDUCTION OXIDASE 7 (FRO7)","FERRIC REDUCTION OXIDASE 7 (ATFRO7);FERRIC REDUCTION OXIDASE 7 (FRO7)"]
["AT2G30120","yellow","protein FLC EXPRESSOR;(source:Araport11)","FLC EXPRESSOR (FLX)","FLC EXPRESSOR (FLX)"]
["AT1G50370","yellow","Calcineurin-like metallo-phosphoesterase superfamily protein;(source:Araport11)","FLOWER- SPECIFIC, PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 1 (FYPP1)","FLOWER- SPECIFIC, PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 1 (FYPP1); (AtFYPP1)"]
["AT4G00650","yellow","Encodes a major determinant of natural variation in Arabidopsis flowering time. Dominant alleles of FRI confer a vernalization requirement causing plants to overwinter vegetatively. Many early flowering accessions carry loss-of-function fri alleles .Twenty distinct haplotypes that contain non-functional FRI alleles have been identified and the distribution analyzed in over 190 accessions. The common lab strains- Col and Ler each carry loss of function mutations in FRI.","FRIGIDA (FRI)","FLOWERING LOCUS A (FLA);REDUCED STEM BRANCHING 7 (RSB7);FRIGIDA (FRI)"]
["AT5G54650","yellow","Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate. FH5 was shown to be a maternally expressed imprinted gene.","FORMIN HOMOLOGY5 (Fh5)","FORMIN HOMOLOGY 5 (ATFH5);FORMIN HOMOLOGY5 (Fh5)"]
["AT5G01100","yellow","O-fucosyltransferase family protein;(source:Araport11)","FRIABLE 1 (FRB1)","FRIABLE 1 (FRB1)"]
["AT1G06430","yellow","encodes a FtsH protease that is localized to the chloroplast","FTSH PROTEASE 8 (ftsh8)","FTSH PROTEASE 8 (ftsh8); (FTSH8)"]
["AT1G79460","yellow","Encodes for a protein with ent-kaurene synthase B activity which catalyzes the second step in the cyclization of GGPP to ent-kaurene in the gibberellins biosynthetic pathway.","GA REQUIRING 2 (GA2)","GA REQUIRING 2 (GA2); (KS);ENT-KAURENE SYNTHASE 1 (KS1);ARABIDOPSIS THALIANA ENT-KAURENE SYNTHASE 1 (ATKS1);ARABIDOPSIS THALIANA ENT-KAURENE SYNTHASE (ATKS)"]
["AT3G58790","yellow","Encodes a protein with putative galacturonosyltransferase activity.","GALACTURONOSYLTRANSFERASE 15 (GAUT15)","GALACTURONOSYLTRANSFERASE 15 (GAUT15)"]
["AT3G24050","yellow","Encodes a member of the GATA factor family of zinc finger transcription factors.","GATA TRANSCRIPTION FACTOR 1 (GATA1)","GATA TRANSCRIPTION FACTOR 1 (GATA1)"]
["AT5G39190","yellow","germin-like protein (GLP2a)","GERMIN-LIKE PROTEIN 2 (GER2)","GERMIN-LIKE PROTEIN 2A (GLP2A);GERMIN-LIKE PROTEIN 2 (GER2);A. THALIANA GERMIN LIKE PROTEIN 2 (ATGER2)"]
["AT5G56300","yellow","A member of the Arabidopsis SABATH methyltransferase gene family. Encodes GAMT2, a methyltransferase that uses S-adenosine-L-methionine (SAM) as a methyl donor to methylate the carboxyl group of GAs, resulting in the methyl esters of GAs (MeGAs). Expressed most highly in the siliques during seed development.","GIBBERELLIC ACID METHYLTRANSFERASE 2 (GAMT2)","GIBBERELLIC ACID METHYLTRANSFERASE 2 (GAMT2)"]
["AT5G07200","yellow","encodes a gibberellin 20-oxidase.","GIBBERELLIN 20-OXIDASE 3 (GA20OX3)","GIBBERELLIN 20-OXIDASE 3 (GA20OX3);ARABIDOPSIS THALIANA GIBBERELLIN 20-OXIDASE 3 (ATGA20OX3); (YAP169)"]
["AT4G00270","yellow","GeBP is a non canonical, nuclear localized leucine zipper transcription factor that binds G-elements.It is strongly expressed in the vegetative meristem and leaf primordium. It regulates genes down stream of a number of signaling pathways including hormone and defense responses.","GL1 ENHANCER BINDING PROTEIN (GeBP)","GL1 ENHANCER BINDING PROTEIN (GeBP);STOREKEEPER RELATED 1 (STKR1)"]
["AT2G48140","yellow","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)","EMBRYO SAC DEVELOPMENT ARREST 4 (EDA4)","GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 16 (LTPG16);EMBRYO SAC DEVELOPMENT ARREST 4 (EDA4)"]
["AT1G03103","yellow","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)","GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 19 (LTPG19)","GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 19 (LTPG19)"]
["AT3G22620","yellow","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein;(source:Araport11)","GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 20 (LTPG20)","GLYCOSYLPHOSPHATIDYLINOSITOL-ANCHORED LIPID PROTEIN TRANSFER 20 (LTPG20)"]
["AT4G37690","yellow","Unlike its close paralog MUCI10 (At2g22900), GT6 is not required for the biosynthesis of seed coat mucilage. GT6 is preferentially expressed in sub-epidermal cell layers of the seed coat.","GLYCOSYLTRANSFERASE 6 (GT6)","GLYCOSYLTRANSFERASE 6 (GT6)"]
["AT3G61570","yellow","This gene is predicted to encode a protein that functions as a Golgi apparatus structural component known as a golgin in mammals and yeast. A fluorescently-tagged version of GC3 co-localizes with Golgi markers, and this localization appears to be replicated using the C-terminal (161 aa) portion of the protein.","GRIP-RELATED ARF-BINDING DOMAIN-CONTAINING PROTEIN 1 (GDAP1)","GOLGIN CANDIDATE 3 (GC3);GRIP-RELATED ARF-BINDING DOMAIN-CONTAINING PROTEIN 1 (GDAP1)"]
["AT1G01910","yellow","Subunit of GET complex. Interacts with GET2 in the presence of GET1.","GUIDED ENTRY OF TAIL-ANCHORED PROTEIN 3A (GET3A)","GUIDED ENTRY OF TAIL-ANCHORED PROTEIN 3A (ATGET3A);GUIDED ENTRY OF TAIL-ANCHORED PROTEIN 3A (GET3A)"]
["AT5G65710","yellow","Encodes a protein controlling the separation step of floral organ abscission.Necessary for pathogen-triggered leaf abscission.","HAESA-LIKE 2 (HSL2)","HAESA-LIKE 2 (HSL2)"]
["AT1G22990","yellow","Heavy metal transport/detoxification superfamily protein;(source:Araport11)","HEAVY METAL ASSOCIATED ISOPRENYLATED PLANT PROTEIN 22 (HIPP22)","HEAVY METAL ASSOCIATED ISOPRENYLATED PLANT PROTEIN 22 (HIPP22);HEAVY METAL ASSOCIATED PROTEIN 4 (ATHMP04)"]
["AT5G24580","yellow","Heavy metal transport/detoxification superfamily protein;(source:Araport11)","(HIPP09)","HEAVY METAL ASSOCIATED PROTEIN 47 (ATHMP47); (HIPP09)"]
["AT4G37200","yellow","Encodes thioredoxin-like protein with disulfide reductase activity that is involved in the biogenesis of the plastid cytochrome b6f complex. Protein is located in the thylakoid membrane with the C-terminal hydrophilic portion, containing the thioredoxin like domain, extending into the thylakoid lumen.","HIGH CHLOROPHYLL FLUORESCENCE 164 (HCF164)","HIGH CHLOROPHYLL FLUORESCENCE 164 (HCF164)"]
["AT3G54610","yellow","Encodes a histone acetyltransferase that plays a role in the determination of the embryonic root-shoot axis. It is also required to regulate the floral meristem activity by modulating the extent of expression of WUS and AG. In addition, it is involved in stem cuticular wax accumulation by modulating CER3 expression via H3K9/14 acetylation. In other eukaryotes, this protein is recruited to specific promoters by DNA binding transcription factors and is thought to promote transcription by acetylating the N-terminal tail of histone H3. The enzyme has indeed been shown to catalyse primarily the acetylation of H3 histone with only traces of H4 and H2A/B being acetylated. Non-acetylated H3 peptide or an H3 peptide that had been previously acetylated on K9 both serve as excellent substrates for HAG1-catalyzed acetylation. However, prior acetylation of H3 lysine 14 blocks radioactive acetylation of the peptide by HAG1. HAG1 is specific for histone H3 lysine 14.GCN5 functions in both SAGA and PAGA complexes to activate gene expression by affecting the levels of H3K9Ac and H3K14Ac in gene promoter regions.","HISTONE ACETYLTRANSFERASE OF THE GNAT FAMILY 1 (HAG1)","HISTONE ACETYLTRANSFERASE 1 (HAT1);GENERAL CONTROL NONDEREPRESSIBLE 5 (GCN5);BIG TOP (BGT);HISTONE ACETYLTRANSFERASE OF THE GNAT FAMILY 1 (HAG1); (HAC3); (HAG01)"]
["AT3G16090","yellow","Encodes one of the Arabidopsis homologs of the yeast/human Hrd1 protein: AT3G16090 (Hrd1A), AT1G65040 (Hrd1B). Involved in ERAD (Endoplasmic reticulum-associated degradation).","HOMOLOG OF YEAST HRD1 (Hrd1A)","HOMOLOG OF YEAST HRD1 (Hrd1A);HOMOLOG OF YEAST HRD1 (AtHrd1A)"]
["AT1G65040","yellow","Encodes one of the Arabidopsis homologs of the yeast/human Hrd1 protein: AT3G16090 (Hrd1A), AT1G65040 (Hrd1B). Involved in ERAD (Endoplasmic reticulum-associated degradation).","HOMOLOG OF YEAST HRD1 (Hrd1B)","HOMOLOG OF YEAST HRD1 (Hrd1B);HOMOLOG OF YEAST HRD1 (AtHrd1B)"]
["AT5G48930","yellow","At5g48930 has been shown to encode for the hydroxycinnamoyl-Coenzyme A shikimate/quinate hydroxycinnamoyltransferase (HCT) both synthesizing and catabolizing the hydroxycinnamoylesters (coumaroyl/caffeoyl shikimate and quinate) involved in the phenylpropanoid pathway. Influence on the accumulation of flavonoids which in turn inhibit auxin transport and reduce plant growth. The mRNA is cell-to-cell mobile.","HYDROXYCINNAMOYL-COA SHIKIMATE/QUINATE HYDROXYCINNAMOYL TRANSFERASE (HCT)","HYDROXYCINNAMOYL-COA SHIKIMATE/QUINATE HYDROXYCINNAMOYL TRANSFERASE (HCT)"]
["AT1G12550","yellow","Encodes a hydroxypyruvate reductase that reduces HP to glycerate and shows even more activity with glyoxylate, a more upstream intermediate of the photorespiratory cycle. It is likely targeted to the chloroplast where it could provide a compensatory bypass for the reduction of HP and glyoxylate within this compartment. Together with HPPR2 and TAT1 involved in the biosynthesis of pHPL from tyrosine.","HYDROXYPYRUVATE REDUCTASE 3 (HPR3)","HYDROXYPHENYLPYRUVATE REDUCTASE 3 (HPPR3);HYDROXYPYRUVATE REDUCTASE 3 (HPR3)"]
["AT5G50770","yellow","Encodes a putative hydroxysteroid dehydrogenase (HSD). Genes that encode HSD include: At5g50600 and At5g50700 (HSD1), At3g47350(HSD2), At3g47360(HSD3), At5g50590 and At5g50690(HSD4), At5g50770(HSD6) (Plant Cell Physiology 50:1463). Two copies of HSD1 and HSD4 exist due to a gene duplication event. In Plant Physiology 145:87, At5g50690 is HSD7, At4g10020 is HSD5.","HYDROXYSTEROID DEHYDROGENASE 6 (HSD6)","HYDROXYSTEROID DEHYDROGENASE 6 (HSD6);HYDROXYSTEROID DEHYDROGENASE 6 (AtHSD6)"]
["AT1G18660","yellow","Membrane localized protein of unknown function. Involved in negative regulation of immune response. Mutants have increased resistance to pathogens.","IAN9-ASSOCIATED PROTEIN1 (IAP1)","IAN9-ASSOCIATED PROTEIN1 (IAP1)"]
["AT4G18570","yellow","Microtubule associated protein involved in cortical microtubule organization.","INCREASED PETAL GROWTH ANISOTROPY 1 (IPGA1)","INCREASED PETAL GROWTH ANISOTROPY 1 (IPGA1)"]
["AT3G17600","yellow","Encodes a member of the Aux/IAA family of proteins implicated in auxin signaling. IAA31 shares several residues with the conserved domain II region, believed to act as a degron in many of the rapidly degraded Aux/IAA family members. An IAA31 fusion protein is quite long-lived, but can be degraded more rapidly in the presence of auxin. Unlike many other family members, IAA31 transcript levels do not rise in response to auxin. Nevertheless, overexpression of IAA31 leads to defects in auxin-related processes such as gravitropism, root development, shoot development, and cotyledon vascular development.","INDOLE-3-ACETIC ACID INDUCIBLE 31 (IAA31)","INDOLE-3-ACETIC ACID INDUCIBLE 31 (IAA31)"]
["AT5G65670","yellow","auxin (indole-3-acetic acid) induced gene The mRNA is cell-to-cell mobile.","INDOLE-3-ACETIC ACID INDUCIBLE 9 (IAA9)","INDOLE-3-ACETIC ACID INDUCIBLE 9 (IAA9)"]
["AT2G43980","yellow","inositol 1,3,4-trisphosphate 5/6-kinase 4;(source:Araport11)","INOSITOL 1,3,4-TRISPHOSPHATE 5/6-KINASE 4 (ITPK4)","INOSITOL 1,3,4-TRISPHOSPHATE 5/6-KINASE 4 (AtITPK4);INOSITOL 1,3,4-TRISPHOSPHATE 5/6-KINASE 4 (ITPK4)"]
["AT1G25420","yellow","Regulator of Vps4 activity in the MVB pathway protein;(source:Araport11)","IST1-LIKE 2 (ISTL2)","IST1-LIKE 2 (ISTL2)"]
["AT4G32350","yellow","Regulator of Vps4 activity in the MVB pathway protein;(source:Araport11)","IST1-LIKE 7 (ISTL7)","IST1-LIKE 7 (ISTL7)"]
["AT5G16560","yellow","Encodes a KANADI protein (KAN) that regulates organ polarity in Arabidopsis. KAN is required for abaxial identity in both leaves and carpels, and encodes a nuclear-localized protein in the GARP family of putative transcription factors. Together with KAN2, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN2 and KAN4, KAN1 appears to be required for proper regulation of PIN1 in early embryogenesis.","KANADI (KAN)","KANADI (KAN);KANADI 1 (KAN1)"]
["AT4G32295","yellow","histone acetyltransferase;(source:Araport11)","KINASE-INDUCIBLE DOMAIN INTERACTING 9 (KIX9)","KINASE-INDUCIBLE DOMAIN INTERACTING 9 (KIX9)"]
["AT3G12020","yellow","P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)","KINESIN 7.3 (KIN7.3)","KINESIN 7.3 (KIN7.3)"]
["AT5G54670","yellow","Encodes a truncated KatC polypeptide (KatC(207-754)), which includes the carboxyl-terminal region of KatC. This was expressed in Escherichia coli and was shown to possess microtubule-stimulated ATPase activity.","KINESIN 3 (ATK3)","KINESIN-LIKE PROTEIN IN ARABIDOPSIS THALIANA C (KATC);KINESIN 3 (ATK3)"]
["AT2G44130","yellow","Encodes a member of a family of F-box proteins, called the KISS ME DEADLY (KMD) family. Component of SCF ubiquitin protein ligase, interacts with phenylalanine ammonia-lyase. AtKFB39 is a homolog of previously identified AtKFB50 (At3g59940) and specifically interacts with Arabidopsis PAL3 and PAL4 in vitro. In planta, together with AtKFB01, KFB20 and KFB50, it regulates PAL protein stability thus controlling phenylpropanoid biosynthesis .","KISS ME DEADLY 3 (KMD3)","KISS ME DEADLY 3 (KMD3);KELCH-DOMAIN-CONTAINING F-BOX PROTEIN 39 (KFB39)"]
["AT1G16970","yellow","Ku80 and ku70 form the heterodimer complex Ku, required for proper maintenance of the telomeric C strand. Ku regulates the extension of the telomeric G strand. Interacts with WEX, and this interaction stimulates the WEX exonuclease activity.","KU70 HOMOLOG (KU70)","KU70 HOMOLOG (KU70);ARABIDOPSIS THALIANA KU70 HOMOLOG (ATKU70)"]
["AT2G40190","yellow","Encodes a putative alpha-1,2-mannosyltransferase in N-linked glycoprotein (homologous to yeast ALG11). Plays vital roles in cell-wall biosynthesis and abiotic stress response. Located in endoplasmic reticulum membrane.","LEAF WILTING 3 (LEW3)","LEAF WILTING 3 (LEW3)"]
["AT1G07090","yellow","LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640);(source:Araport11)","LIGHT SENSITIVE HYPOCOTYLS 6 (LSH6)","LIGHT SENSITIVE HYPOCOTYLS 6 (LSH6)"]
["AT3G19260","yellow","LAG1 homolog. Loss of function mutant is sensitive to AAL-toxin. LOH2 is presumed to function in sphingolipid metabolism. It encodes a ceramide synthase essential for production of LCFA-ceramides (mainly C16). Uses palmitoyl-CoA and dihydroxy LCB substrates.","LAG1 HOMOLOGUE 2 (LOH2)","LONGEVITY ASSURANCE GENE1 HOMOLOG 2 (LAG1 HOMOLOG 2);LAG1 HOMOLOGUE 2 (LOH2)"]
["AT1G23010","yellow","Encodes a protein with multicopper oxidase activity. Located in ER. Function together with LPR2 (AT1G71040) and a P5-type ATPase (At5g23630/PDR2) in a common pathway that adjusts root meristem activity to Pi (inorganic phosphate) availability.","LOW PHOSPHATE ROOT1 (LPR1)","LOW PHOSPHATE ROOT1 (LPR1)"]
["AT2G29045","yellow","Encodes a member of a family of small,secreted, cysteine rich protein with sequence similarity to the PCP (pollen coat protein) gene family.","LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 62 (LCR62)","LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 62 (LCR62)"]
["AT3G19640","yellow","Transmembrane magnesium transporter. One of nine family members.","MAGNESIUM TRANSPORTER 4 (MGT4)","MAGNESIUM TRANSPORTER 4 (MGT4); (MRS2-3);ARABIDOPSIS THALIANA MAGNESIUM TRANSPORT 4 (ATMGT4)"]
["AT2G42880","yellow","member of MAP Kinase","MAP KINASE 20 (MPK20)","MAP KINASE 20 (ATMPK20);MAP KINASE 20 (MPK20)"]
["AT2G34870","yellow","hydroxyproline-rich glycoprotein family protein;(source:Araport11)","MATERNAL EFFECT EMBRYO ARREST 26 (MEE26)","MATERNAL EFFECT EMBRYO ARREST 26 (MEE26)"]
["AT2G35340","yellow","helicase domain-containing protein;(source:Araport11)","MATERNAL EFFECT EMBRYO ARREST 29 (MEE29)","MATERNAL EFFECT EMBRYO ARREST 29 (MEE29)"]
["AT2G28230","yellow","Encodes one of the subunits of the head domain of the MEDIATOR complex. The complex conveys transcriptional signals by acting as an intermediary between transcription factors and RNA polymerase II. Together with MED18, MED20 is proposed to control the balance of salicylic acid and jasmonate associated defense pathways. It is involved in miRNA biogenesis by recruiting Pol II to promoters of miRNA genes.","MEDIATOR 20A (MED20A)","MEDIATOR 20 (MED20);MEDIATOR 20A (MED20A)"]
["AT3G10820","yellow","Transcription elongation factor (TFIIS) family protein;(source:Araport11)","MEDIATOR 26A (MED26A)","MEDIATOR 26A (MED26A)"]
["AT4G21750","yellow","Encodes a homeobox protein similar to GL2. It is expressed in both the apical and basal daughter cells of the zygote as well as their progeny. Expression is detected starting the two-celled stage of embryo development and is later restricted to the outermost, epidermal cell layer from its inception. Its promoter is highly modular with each region contributing to specific aspects of the gene's spatial and temporal expression. Double mutant analysis with PDF2, another L1-specific gene, suggests that their functions are partially redundant and the absence of both of the genes result in abnormal shoot development.","MERISTEM LAYER 1 (ATML1)","MERISTEM LAYER 1 (ATML1)"]
["AT5G54930","yellow","AT hook motif-containing protein;(source:Araport11)","METABOLIC NETWORK MODULATOR 1 (MNM1)","METABOLIC NETWORK MODULATOR 1 (MNM1)"]
["AT5G52230","yellow","Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.","METHYL-CPG-BINDING DOMAIN PROTEIN 13 (MBD13)","METHYL-CPG-BINDING DOMAIN PROTEIN 13 (MBD13)"]
["AT5G35520","yellow","encodes a homologue of the yeast (S. pombe) Mis12 (minichromosome instability) protein. MIS12 co-localizes with 180 bp repeats of centromeric DNA throughout the cell cycle with a similar pattern to AtCENH3/HTR12. Neither of these two proteins completely cover the 180 bp regions based on FISH analysis.","MINICHROMOSOME INSTABILITY 12 (MIS12)-LIKE (MIS12)","MINICHROMOSOME INSTABILITY 12 HOMOLOGUE (MIS12);MIS12 HOMOLOGUE (MIS12);ARABIDOPSIS MINICHROMOSOME INSTABILITY 12 (MIS12)-LIKE (ATMIS12);MINICHROMOSOME INSTABILITY 12 (MIS12)-LIKE (MIS12)"]
["AT3G13530","yellow","MAP3K epsilon protein kinase 1 is functionally redundant with MAP3Ke2. Required for pollen development but not essential. map3ke1;map3ke2 double-mutant pollen grains develop plasma membrane irregularities following pollen mitosis I. Localized primarily in the plasma membrane. Expressed in leaf trichomes, root columella cells and developing ovules.","MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7 (MAPKKK7)","MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7 (MAPKKK7);MAP3K EPSILON PROTEIN KINASE (MAP3KE1)"]
["AT4G37280","yellow","MRG1 and MRG2 proteins act as readers of H3K4me3/H3K36me3 marked chromatin. They interact with each other and CO to regulate the expression of FT.","MORF RELATED GENE 1 (MRG1)","MORF RELATED GENE 1 (MRG1)"]
["AT2G34660","yellow","encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. An ABCC-type arsenite-phytochelatin transporter. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. The mRNA is cell-to-cell mobile.","ATP-BINDING CASSETTE C2 (ABCC2)","MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 2 (ATMRP2); (EST4);MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 2 (MRP2);ATP-BINDING CASSETTE C2 (ABCC2);ARABIDOPSIS THALIANA ATP-BINDING CASSETTE C2 (AtABCC2)"]
["AT5G17980","yellow","C2 calcium/lipid-binding plant phosphoribosyltransferase family protein;(source:Araport11)","MULTIPLE C2 DOMAIN AND TRANSMEMBRANE REGION PROTEIN 16 (MCTP16)","MULTIPLE C2 DOMAIN AND TRANSMEMBRANE REGION PROTEIN 16 (MCTP16)"]
["AT3G12820","yellow","Member of the R2R3 factor gene family.","MYB DOMAIN PROTEIN 10 (MYB10)","MYB DOMAIN PROTEIN 10 (AtMYB10);MYB DOMAIN PROTEIN 10 (MYB10)"]
["AT4G38620","yellow","Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2. The mRNA is cell-to-cell mobile.","MYB DOMAIN PROTEIN 4 (MYB4)","MYB DOMAIN PROTEIN 4 (ATMYB4);MYB DOMAIN PROTEIN 4 (MYB4)"]
["AT3G13540","yellow","Encodes a member of the MYB family of transcriptional regulators. MYB5 act as a negative regulator of trichome branching and play a role in the correct formation of the seed coat and possibly the formation the underlying endosperm layers. Loss of function mutations have defects in seed coat mucilage and columella cells as well as trichome defects (smaller and reduced number of branches).","MYB DOMAIN PROTEIN 5 (MYB5)","MYB DOMAIN PROTEIN 5 (ATMYB5);ABC TRANSPORTER OF THE MITOCHONDRION 2 (ATM2);MYB DOMAIN PROTEIN 5 (MYB5)"]
["AT1G16490","yellow","Member of the R2R3 factor gene family.","MYB DOMAIN PROTEIN 58 (MYB58)","MYB DOMAIN PROTEIN 58 (AtMYB58);MYB DOMAIN PROTEIN 58 (MYB58)"]
["AT1G08810","yellow","putative transcription factor of the R2R3-MYB gene family. Transcript increases under conditions that promote stomatal opening (white and blue light, abi1-1 mutation) and decreases under conditions that trigger stomatal closure (ABA, desiccation, darkness), with the exception of elevated CO2. Expressed exclusively in guard cells of all tissues. It is required for light-induced opening of stomata. Mutant shows reduced stomatal aperture which helps to limit water loss during drought.","MYB DOMAIN PROTEIN 60 (MYB60)","MYB DOMAIN PROTEIN 60 (MYB60);MYB DOMAIN PROTEIN 60 (AtMYB60)"]
["AT1G09540","yellow","Encodes putative transcription factor. Mutants lack of mucilage extrusion from the seeds during imbibition. Reduced quantities of mucilage are deposited during the development of the seed coat epidermis in myb61 mutants. Expressed in guard cells,loss of function mutations show an increase in stomatal pore opening suggesting a role in ABA independent regulation of stomatal pore size.","MYB DOMAIN PROTEIN 61 (MYB61)","MYB DOMAIN PROTEIN 61 (MYB61);ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 61 (ATMYB61)"]
["AT1G52730","yellow","Participates in ABA signaling through the regulation of MYB30.","MYB30-INTERACTING WD40 PROTEIN 1 (MIW1)","MYB30-INTERACTING WD40 PROTEIN 1 (MIW1)"]
["AT4G39800","yellow","** Referred to as MIPS2 in Mitsuhashi et al 2008. myo-inositol-1-phosphate synthase isoform 1.Expressed in leaf, root and silique. Immunolocalization experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization.","D-MYO-INOSITOL 3-PHOSPHATE SYNTHASE 1 (MIPS1)","MYO-INOSITOL-1-PHOSPHATE SYNTHASE 1 (MIPS1);MYO-INOSITOL-1-PHOSPHATE SYNTHASE 1 (ATMIPS1);MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2 (ATMIPS2);MYO-INOSITOL-1-PHOSPHATE SYNTHASE 2 (MIPS2);INOSITOL 3-PHOSPHATE SYNTHASE 1 (ATIPS1);D-MYO-INOSITOL 3-PHOSPHATE SYNTHASE 1 (MIPS1); (MI-1-P SYNTHASE)"]
["AT5G58320","yellow","Encodes a member of the NET superfamily of proteins that potentially couples different membranes to the actin cytoskeleton in plant cells. It colocalizes with filamentous actin and is localized to the tonoplast membrane. It is expressed in the epidermis of the root meristem and the early expansion zone.","NETWORKED 4A (NET4A)","NETWORKED 4A (NET4A)"]
["AT5G58980","yellow","Neutral/alkaline non-lysosomal ceramidase;(source:Araport11)","NEUTRAL CERAMIDASE3 (ATNCER3)","NEUTRAL CERAMIDASE3 (ATNCER3)"]
["AT4G38350","yellow","Patched family protein;(source:Araport11)","NIEMANN-PICK DISEASE TYPE C1-2 (ATNPC1-2)","NIEMANN-PICK DISEASE TYPE C1-2 (ATNPC1-2)"]
["AT1G78390","yellow","Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene increases during the first 6h of imbibition.","NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 9 (NCED9)","NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 9 (NCED9);NINE-CIS-EPOXYCAROTENOID DIOXYGENASE 9 (ATNCED9)"]
["AT1G27080","yellow","Encodes a protein with low-affinity nitrate transporter activity that is expressed in the vascular tissue of the funiculus and the silique. This plasma membrane-localized enzyme is predicted to have 12 transmembrane domains. Plants lacking NRT1.6 have reduced levels of nitrate in their seeds and have increased levels of early embryonic developmental defects and seed abortion.","NRT1/ PTR FAMILY 2.12 (NPF2.12)","NITRATE TRANSPORTER 1.6 (NRT1.6); (ATNPF2.12);NRT1/ PTR FAMILY 2.12 (NPF2.12)"]
["AT5G43050","yellow","Chloroplast localized YCF20-like gene involved in nonphotochemical quenching. Has overlapping functions with npq7 The mRNA is cell-to-cell mobile.","NONPHOTOCHEMICAL QUENCHING 6 (NPQ6)","NONPHOTOCHEMICAL QUENCHING 6 (NPQ6)"]
["AT1G07230","yellow","non-specific phospholipase C1;(source:Araport11)","NON-SPECIFIC PHOSPHOLIPASE C1 (NPC1)","NON-SPECIFIC PHOSPHOLIPASE C1 (NPC1)"]
["AT5G45110","yellow","Encodes NPR3, a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays. NPR3 and NPR4 are receptors for the immune signal salicylic acid. The mRNA is cell-to-cell mobile.","NPR1-LIKE PROTEIN 3 (NPR3)","NPR1-LIKE PROTEIN 3 (NPR3); (ATNPR3)"]
["AT1G03920","yellow","Ubiquitously expressed protein kinase.","NUCLEAR DBF2-RELATED 2 (NDR2)","NUCLEAR DBF2-RELATED 2 (NDR2)"]
["AT3G14020","yellow","nuclear factor Y, subunit A6;(source:Araport11)","NUCLEAR FACTOR Y, SUBUNIT A6 (NF-YA6)","NUCLEAR FACTOR Y, SUBUNIT A6 (NF-YA6)"]
["AT2G37060","yellow","nuclear factor Y, subunit B8;(source:Araport11)","NUCLEAR FACTOR Y, SUBUNIT B8 (NF-YB8)","NUCLEAR FACTOR Y, SUBUNIT B8 (NF-YB8)"]
["AT1G24450","yellow","Putative RNAse III-Like protein; intracellular localization affected by TBSV.","NUCLEAR FUSION DEFECTIVE 2 (NFD2)","NUCLEAR FUSION DEFECTIVE 2 (NFD2); (RTL4)"]
["AT1G10540","yellow","nucleobase-ascorbate transporter 8;(source:Araport11)","NUCLEOBASE-ASCORBATE TRANSPORTER 8 (NAT8)","NUCLEOBASE-ASCORBATE TRANSPORTER 8 (NAT8); (ATNAT8)"]
["AT1G79690","yellow","Encodes a dual activity enzyme which catalyses the hydrolysis of a peptide bond and of a phosphate bond, acting both as a dipeptidyl peptidase III and an atypical Nudix hydrolase.","NUDIX HYDROLASE HOMOLOG 3 (NUDT3)","NUDIX HYDROLASE HOMOLOG 3 (atnudt3);NUDIX HYDROLASE HOMOLOG 3 (NUDT3);NUDIX-DPP III (ATND)"]
["AT5G01170","yellow","hypothetical protein (DUF740);(source:Araport11)","OCTOPUS LIKE 1 (OPL1)","OCTOPUS LIKE 1 (OPL1)"]
["AT3G05320","yellow","Golgi localized protein with similarity to protein O-fucosyltransferases. Mutants show lower seed set/reduced fertility. Mutant pollen fails to compete with wild type due to the inability to penetrate the stigma-style boundary.","O-FUCOSYL TRANSFERASE 1 (OFT1)","O-FUCOSYL TRANSFERASE 1 (OFT1); (ATOFT1)"]
["AT4G08590","yellow","ORTHRUS-like protein;(source:Araport11)","ORTHRUS-LIKE (ORTHL)","ORTHRUS-LIKE 1 (ORL1); (15935);ORTHRUS-LIKE (ORTHL);ORTH-LIKE 1 (ORL1);VARIANT IN METHYLATION 6 (VIM6)"]
["AT2G05590","yellow","TLDc domain protein that confers increased tolerance to oxidative stress.","OXIDATION RESISTANCE 2 (OXR2)","OXIDATION RESISTANCE 2 (OXR2)"]
["AT3G54010","yellow","Immunophilin-like protein similar to the p59 FK506-binding protein (FKBP52). Shows rotamase activity and contains an FKBP-like domain and three tetratricopeptide repeat units. Members of this class of mutation show ectopic cell proliferation in cotyledons. Gene may be alternatively spliced. Belongs to one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","PASTICCINO 1 (PAS1)","PASTICCINO 1 (PAS1); (DEI1)"]
["AT2G39220","yellow","Phospholipase pPLAIIIa involved in seed germination and resistance to Turnip Crinkle Virus.","PATATIN-LIKE PROTEIN 6 (PLP6)","PATATIN-LIKE PROTEIN 6 (PLP6); (PLA IIB); (PPLAIIIA)"]
["AT5G12360","yellow","Encodes a protein that protects meiotic centromere cohesion.","PATRONUS 2 (PANS2)","PATRONUS 2 (PANS2)"]
["AT1G07960","yellow","Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily.","PDI-LIKE 5-1 (PDIL5-1)","PDI-LIKE 5-1 (PDIL5-1);PDI-LIKE 5-1 (ATPDIL5-1)"]
["AT3G59010","yellow","Encodes PME35, a pectin methylesterase. PME35-mediated demethylesterification of the primary cell wall regulates the mechanical strength of the supporting tissue.","PECTIN METHYLESTERASE 61 (PME61)","PECTIN METHYLESTERASE 35 (PME35);PECTIN METHYLESTERASE 61 (PME61)"]
["AT1G78500","yellow","Encodes a protein with pentacyclic triterpene synthase activity. In addition to the compounds lupeol, &#945;-amyrin and bauerenol, this enzyme was also shown to produce two <i>seco</i>-triterpenes: &#945;- and &#946;-<i>seco</i>-amyrin.","PENTACYCLIC TRITERPENE SYNTHASE 6 (PEN6)","PENTACYCLIC TRITERPENE SYNTHASE 6 (PEN6)"]
["AT1G73080","yellow","Encodes a leucine-rich repeat receptor kinase. Functions as a receptor for AtPep1 to amplify innate immunity response to pathogen attacks. The mRNA is cell-to-cell mobile.","PEP1 RECEPTOR 1 (PEPR1)","PEP1 RECEPTOR 1 (PEPR1);PEP1 RECEPTOR 1 (ATPEPR1)"]
["AT5G01180","yellow","Encodes a dipeptide transporter expressed in pollen and ovules during early seed development. GFP-tagged PTR5 localizes to the plasma membrane.","NRT1/ PTR FAMILY 8.2 (NPF8.2)","PEPTIDE TRANSPORTER 5 (PTR5); (ATNPF8.2);NRT1/ PTR FAMILY 8.2 (NPF8.2);ARABIDOPSIS THALIANA PEPTIDE TRANSPORTER 5 (ATPTR5)"]
["AT3G28360","yellow","P-glycoprotein 16;(source:Araport11)","ATP-BINDING CASSETTE B16 (ABCB16)","P-GLYCOPROTEIN 16 (PGP16);ATP-BINDING CASSETTE B16 (ABCB16)"]
["AT2G42600","yellow","Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.PPC1 and PPC2 are crucial for balancing carbon and nitrogen metabolism.","PHOSPHOENOLPYRUVATE CARBOXYLASE 2 (PPC2)","PHOSPHOENOLPYRUVATE CARBOXYLASE 2 (ATPPC2);PHOSPHOENOLPYRUVATE CARBOXYLASE 2 (PPC2)"]
["AT1G12680","yellow","phosphoenolpyruvate carboxylase-related kinase 2;(source:Araport11)","PHOSPHOENOLPYRUVATE CARBOXYLASE-RELATED KINASE 2 (PEPKR2)","PHOSPHOENOLPYRUVATE CARBOXYLASE-RELATED KINASE 2 (PEPKR2)"]
["AT2G25290","yellow","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones.","PHOX1 (Phox1)","PHOX1 (Phox1)"]
["AT3G49780","yellow","Phytosulfokine 3 precursor, coding for a unique plant peptide growth factor. Plants overexpressing this gene (under a 35S promoter), develop normal cotyledons and hypocotyls but their growth, in particular that of their roots, was faster than that of wildtype. Expression is controlled by miPEP858a/miR858a.","PHYTOSULFOKINE 4 PRECURSOR (PSK4)","PHYTOSULFOKINE 4 PRECURSOR (PSK4);PHYTOSULFOKINE 4 PRECURSOR (ATPSK4); (ATPSK3 (FORMER SYMBOL))"]
["AT1G73460","yellow","Protein kinase superfamily protein;(source:Araport11)","PLANT-SPECIFIC DUAL-SPECIFICITY TYROSINE PHOSPHORYLATION-REGULATED KINASE 2A (DYRKP-2A)","PLANT-SPECIFIC DUAL-SPECIFICITY TYROSINE PHOSPHORYLATION-REGULATED KINASE 2A (DYRKP-2A)"]
["AT3G04370","yellow","Encodes a plasmodesmal protein that may be involved in the intercellular movement of molecules through the plasmodesmata. The protein has two DUF26 domains and a single transmembrane domain.","PLASMODESMATA-LOCATED PROTEIN 4 (PDLP4)","PLASMODESMATA-LOCATED PROTEIN 4 (PDLP4)"]
["AT5G52920","yellow","encodes a dominant chloroplast pyruvate kinase beta subunit. Important for seed oil biosynthesis. Ubiquitously expressed, with significantly increased expression in maturing seeds. The mutant plant has wrinkled seeds, with a 50-70% reduction in seed fatty acid content. The mRNA is cell-to-cell mobile.","PLASTIDIC PYRUVATE KINASE BETA SUBUNIT 1 (PKP-BETA1)","PLASTIDIAL PYRUVATE KINASE 1 (PKP1);PLASTIDIAL PYRUVATE KINASE 2 (PKP2);PLASTIDIC PYRUVATE KINASE BETA SUBUNIT 1 (PKP-BETA1)"]
["AT1G32440","yellow","encodes a chloroplast pyruvate kinase beta subunit. The enzyme is less active than the other chloroplast pyruvate kinase beta subunit encoded by AT5G52920. Involved in seed oil biosynthesis. Can partially complement the AT5G52920 mutant.","PLASTIDIAL PYRUVATE KINASE 3 (PKp3)","PLASTIDIAL PYRUVATE KINASE 3 (PKp3)"]
["AT3G30842","yellow","pleiotropic drug resistance 10;(source:Araport11)","ATP-BINDING CASSETTE G38 (ABCG38)","PLEIOTROPIC DRUG RESISTANCE 10 (PDR10);ATP-BINDING CASSETTE G38 (ABCG38); (ATPDR10)"]
["AT5G17430","yellow","Encodes an AP2-domain containing protein similar to ANT. Expressed in embryos and lateral root primordium. PLT4 acts after PLT3,5 and 7 during lateral roof formation.","BABY BOOM (BBM)","PLETHORA4 (PLT4);BABY BOOM (BBM)"]
["AT4G29720","yellow","Thermospermine (T-Spm) oxidase","POLYAMINE OXIDASE 5 (PAO5)","POLYAMINE OXIDASE 5 (ATPAO5);POLYAMINE OXIDASE 5 (PAO5)"]
["AT2G30070","yellow","Encodes a high affinity potassium transporter.","POTASSIUM TRANSPORTER 1 (KT1)","POTASSIUM TRANSPORTER 1 (ATKT1); (ATKT1P); (ATKUP1);POTASSIUM UPTAKE TRANSPORTER 1 (KUP1);POTASSIUM TRANSPORTER 1 (KT1)"]
["AT2G35330","yellow","RING/U-box superfamily protein;(source:Araport11)","PP2CA INTERACTING RING FINGER PROTEIN 1 (PIR1)","PP2CA INTERACTING RING FINGER PROTEIN 1 (PIR1)"]
["AT2G27820","yellow","Encodes a plastid-localized arogenate dehydratase involved in phenylalanine biosynthesis. Not less than six genes encoding ADT were identi&#64257;ed in the Arabidopsis genome: ADT1 [At1g11790]; ADT2 [At3g07630]; ADT3 [At2g27820]; ADT4 [At3g44720]; ADT5 [At5g22630]; and ADT6 [At1g08250].","PREPHENATE DEHYDRATASE 1 (PD1)","PREPHENATE DEHYDRATASE 1 (PD1);AROGENATE DEHYDRATASE 3 (ADT3)"]
["AT1G08700","yellow","Encodes a protein similar to animal presenilin whose expression is increased in response to potassium (K+) deprivation. Located in intracellular membrane compartments.","PRESENILIN-1 (PS1)","PRESENILIN-1 (PS1)"]
["AT2G29900","yellow","Encodes a gamma-secretase subunit. Associates with other subunits in intracellular membrane compartments.","PRESENILIN-2 (PS2)","PRESENILIN-2 (PS2)"]
["AT2G28930","yellow","protein kinase 1B;(source:Araport11)","PROTEIN KINASE 1B (PK1B)","PROTEIN KINASE 1B (APK1B);PROTEIN KINASE 1B (PK1B);PBS1-LIKE 10 (PBL10)"]
["AT4G21900","yellow","Encodes a proteinaceous RNase P that supports RNase P activity in vivo in both organelles and the nucleus. It is also involved in the maturation of small nucleolar RNA (snoRNA) and mRNA.","PROTEINACEOUS RNASE P 3 (PRORP3)","PROTEINACEOUS RNASE P 3 (PRORP3)"]
["AT3G15340","yellow","Encodes PPI2 (proton pump interactor 2), a homologue of PPI1, a protein that interacts with the plasma membrane H+ ATPase AHA1.","PROTON PUMP INTERACTOR 2 (PPI2)","PROTON PUMP INTERACTOR 2 (PPI2)"]
["AT1G34320","yellow","Ikzf5 (DUF668);(source:Araport11)","PSK SIMULATOR 1 (PSI1)","PSK SIMULATOR 1 (PSI1)"]
["AT3G10360","yellow","Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.","PUMILIO 4 (PUM4)","PUMILIO 4 (APUM4);PUMILIO 4 (PUM4)"]
["AT4G04460","yellow","Developmental programmed cell death associated gene, downstream target of downstream targets of SMB, ANAC087, and ANAC046.","PUTATIVE ASPARTIC PROTEINASE A3 (PASPA3)","PUTATIVE ASPARTIC PROTEINASE A3 (PASPA3); (ATPASPA3)"]
["AT2G47750","yellow","Encodes GH3.9, a member of the GH3 family auxin-responsive genes. gh3.9-1 mutants had greater primary root length, increased sensitivity to indole-3-acetic acid (IAA)-mediated root growth inhibition, but no obvious effects on apical dominance or leaf morphology.","PUTATIVE INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.9 (GH3.9)","PUTATIVE INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.9 (GH3.9)"]
["AT2G40330","yellow","Encodes a member of the PYR (pyrabactin resistance )/PYL(PYR1-like)/RCAR (regulatory components of ABA receptor) family proteins with 14 members. PYR/PYL/RCAR family proteins function as abscisic acid sensors. Mediate ABA-dependent regulation of protein phosphatase 2Cs ABI1 and ABI2.","PYR1-LIKE 6 (PYL6)","PYR1-LIKE 6 (PYL6);REGULATORY COMPONENTS OF ABA RECEPTOR 9 (RCAR9)"]
["AT3G07970","yellow","Required for pollen separation during normal development. In qrt mutants, the outer walls of the four meiotic products of the pollen mother cell are fused, and pollen grains are released in tetrads.May be required for cell type-specific pectin degradation.","QUARTET 2 (QRT2)","QUARTET 2 (QRT2)"]
["AT5G47870","yellow","cobalt ion-binding protein;(source:Araport11)","RADIATION SENSITIVE 52-2 (RAD52-2)","RADIATION SENSITIVE 52-2 (RAD52-2);ORGANELLAR DNA-BINDING PROTEIN 2 (ODB2); (RAD52-2B)"]
["AT5G21900","yellow","Contributes to UV tolerance through nucleotide excision repair.","RADIATION SENSITIVE 7C (RAD7C)","RADIATION SENSITIVE 7C (RAD7C)"]
["AT4G15800","yellow","Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. The mRNA is cell-to-cell mobile.","RALF-LIKE 33 (RALFL33)","RALF-LIKE 33 (RALFL33); (RALF33)"]
["AT3G21060","yellow","Encodes a structural core component of a COMPASS-like H3K4 histone methylation complex that is also involved in the timing of the floral transition.","RBBP5 LIKE (RBL)","RBBP5 LIKE (RBL)"]
["AT1G75110","yellow","Encodes an arabinosyltransferase that modifies extensin proteins in root hair cells.","REDUCED RESIDUAL ARABINOSE 2 (RRA2)","REDUCED RESIDUAL ARABINOSE 2 (RRA2)"]
["AT5G40450","yellow","Encodes a member of a plant gene family, APK_ORTHOMCL5144,of unknown function. RBB1 is localized to the cytosol and involved in vacuolar biogenesis and organization. RBB1 mutants have increased number of vacuolar bulbs and fewer trans-vacuolar strands.","REGULATOR OF BULB BIOGENESIS1 (RBB1)","REGULATOR OF BULB BIOGENESIS1 (RBB1)"]
["AT3G04280","yellow","Encodes an atypical subtype of the ARR (Arabidopsis response regulator) protein family. ARR22 is more similar to the receiver domains of hybrid kinases than other response regulators. It acts as a phosphohistidine phosphatase when tested with phospho-AHP5 in vitro suggesting that it might be involved in a two-component phosphorelay. Expression of ARR22 transcripts appears to be localized to the chalaza and to be induced by wounding. Ectopic expression of ARR in other parts of the plant leads to reduced cytokinin-related responses and impaired root, shoot, and flower development. Overexpression of wild-type ARR22 in an arr22 mutant background causes variable defects in plant growth and fertility. But, in the same ar22 background, over-expression of versions of ARR22 that should act as dominant-negative or constitutively active proteins, based on mutations to the conserved Asp residue, do not show any phenotypic abnormalities, raising the possibility that these may not act as canonical response regulators.","RESPONSE REGULATOR 22 (RR22)","RESPONSE REGULATOR 22 (ARR22);RESPONSE REGULATOR 22 (RR22)"]
["AT5G15740","yellow","RRT1 is a member of a novel glycosyltransferase famly in plants. It functions as a rhamnosyltransferase, elongating the RG-1 backbone. It functions during seed coat mucilage development.","RG-I RHAMNOSYLTRANSFERASE 1 (RRT1)","RG-I RHAMNOSYLTRANSFERASE 1 (RRT1)"]
["AT4G34630","yellow","prostatic spermine-binding-like protein;(source:Araport11)","RIBOSOMAL PROTEIN BS16CY (BS16CY)","RIBOSOMAL PROTEIN BS16CY (BS16CY)"]
["AT3G13640","yellow","member of RLI subfamily","ATP-BINDING CASSETTE E1 (ABCE1)","RNASE L INHIBITOR PROTEIN 1 (RLI1);RNASE L INHIBITOR PROTEIN 1 (ATRLI1);ATP-BINDING CASSETTE E1 (ABCE1)"]
["AT5G49820","yellow","root UVB sensitive protein (Protein of unknown function, DUF647);(source:Araport11)","ROOT UV-B SENSITIVE 6 (RUS6)","ROOT UV-B SENSITIVE 6 (RUS6);EMBRYO DEFECTIVE 1879 (emb1879)"]
["AT1G11330","yellow","Recognizes the 9-methyl?branched sphingoid base, produced as result of cleavage of Phytophthora infestans?ceramide D (Pi-Cer D) by NCER2. the 9-Methyl?branched sphingoid base is specific to microbes and induces plant immune responses by physically interacting with RDA2.","RESISTANT TO DFPM INHIBITION OF ABA SIGNALING 2 (RDA2)","S DOMAIN1 13 (SD1-13);RESISTANT TO DFPM INHIBITION OF ABA SIGNALING 2 (RDA2)"]
["AT5G59220","yellow","Encodes a member of the PP2C family (Clade A protein phosphatases type 2C). Functions as a negative regulator of osmotic stress and ABA signaling.","HIGHLY ABA-INDUCED PP2C GENE 1 (HAI1)","SENESCENCE ASSOCIATED GENE 113 (SAG113);HIGHLY ABA-INDUCED PP2C GENE 1 (HAI1)"]
["AT3G10985","yellow","A senescence-associated gene whose expression is induced in response to treatment with Nep1, a fungal protein that causes necrosis. The mRNA is cell-to-cell mobile.","SENESCENCE ASSOCIATED GENE 20 (SAG20)","SENESCENCE ASSOCIATED GENE 20 (SAG20);ARABIDOPSIS THALIANA WOUND-INDUCED PROTEIN 12 (ATWI-12);WOUND-INDUCED PROTEIN 12 (WI12)"]
["AT5G43940","yellow","Encodes a glutathione-dependent formaldehyde dehydrogenase (also known as class III type alcohol dehydrogenase) reduces S-nitrosoglutathione (GSNO), the condensation product of glutathione and NO, that is a naturally occurring NO reservoir and also a reactive nitrogen intermediate. Gene expression is reduced by wounding and induced by salicylic acid. Is required for the acclimation of plants to high temperature and for fertility.","SENSITIVE TO HOT TEMPERATURES 5 (HOT5)","SENSITIVE TO HOT TEMPERATURES 5 (HOT5)"]
["AT5G09640","yellow","encodes a serine carboxypeptidase-like (SCPL) protein. Mutants accumulate sinapoylglucose instead of sinapoylcholine, and have increased levels of choline and decreased activity of the enzyme sinapoylglucose:choline sinapoyltransferase.","SERINE CARBOXYPEPTIDASE-LIKE 19 (SCPL19)","SERINE CARBOXYPEPTIDASE-LIKE 19 (SCPL19);SINAPOYLGLUCOSE ACCUMULATOR 2 (SNG2)"]
["AT4G38470","yellow","Serine/threonine kinase that phosphorylate transit peptides of chloroplast and mitochondria targeted pre-proteins.","SERINE/THREONINE/TYROSINE KINASE 46 (STY46)","SERINE/THREONINE/TYROSINE KINASE 46 (STY46)"]
["AT5G37055","yellow","Encodes SERRATED LEAVES AND EARLY FLOWERING (SEF), an Arabidopsis homolog of the yeast SWC6 protein, a conserved subunit of the SWR1/SRCAP complex. SEF loss-of-function mutants have a pleiotropic phenotype characterized by serrated leaves, frequent absence of inflorescence internodes, bushy aspect, and flowers with altered number and size of organs. sef plants flower earlier than wild-type plants both under inductive and non-inductive photoperiods. SEF, ARP6 and PIE1 might form a molecular complex in Arabidopsis related to the SWR1/SRCAP complex identified in other eukaryotes.","SERRATED LEAVES AND EARLY FLOWERING (SEF)","SERRATED LEAVES AND EARLY FLOWERING (SEF); (AtSWC6)"]
["AT2G22740","yellow","Encodes a SU(VAR)3-9 homolog, a methyltransferase involved in histone methylation. The protein was shown to bind to methylated cytosines of CG, CNG and CNN motifs but has a preference for the latter two. This is a member of a subfamily of SET proteins that shares a conserved SRA domain.","SU(VAR)3-9 HOMOLOG 6 (SUVH6)","SET DOMAIN PROTEIN 23 (SDG23);SU(VAR)3-9 HOMOLOG 6 (SUVH6)"]
["AT5G10200","yellow","Encodes a mitochondria-localized PPR protein that is crucial for early embryo-development. Required for ethylene-induced root hair growth through stabilizing PIN2.","SHADE AVOIDANCE 4 (SAV4)","SHADE AVOIDANCE 4 (SAV4)"]
["AT2G42830","yellow","AGAMOUS [AG]-like MADS box protein (AGL5) involved in fruit development (valve margin and dehiscence zone differentiation). A putative direct target of AG. SHP2 has been shown to be a downstream gene of the complex formed by AG and SEP proteins (SEP4 alone does not form a functional complex with AG).","SHATTERPROOF 2 (SHP2)","SHATTERPROOF 2 (SHP2);AGAMOUS-LIKE 5 (AGL5)"]
["AT1G34418","yellow","Has been identified as a translated small open reading frame by ribosome profiling.","SHORT OPEN READING FRAME 15 (SORF15)","SHORT OPEN READING FRAME 15 (SORF15)"]
["AT5G24120","yellow","Encodes a specialized sigma factor that functions in regulation of plastid genes and is responsible for the light-dependent transcription at the psbD LRP. Activation of SIG5 is dependent upon blue light and mediated by cryptochromes.","SIGMA FACTOR E (SIGE)","SIGMA FACTOR 5 (ATSIG5)"]
["AT5G55760","yellow","Encodes SRT1, a member of the SIR2 (sirtuin) family HDAC (histone deacetylase) (SRT1/AT5g55760, SRT2/AT5G09230).Homolog of mammalian SIRT7 homolog which was described as an rRNA deacetylase.","SIRTUIN 1 (SRT1)","SIRTUIN 1 (SRT1)"]
["AT1G50410","yellow","Encodes a member of the SNF2 family of helicase-like proteins and is involved in RNA-directed DNA methylation. It is functionally redundant with FRG1.","SNF2-RING-HELICASE?LIKE 2 (FRG2)","SNF2-RING-HELICASE?LIKE 2 (FRG2);CHROMATIN REMODELING 28 (CHR28)"]
["AT2G23510","yellow","BAHD acyltransferase which transfers acyl-groups from different acyl-donors specifically to amines. Catalyzes the multisite acylation of spermidine. Uses caffeoyl/feruoyl/sinapoyl-CoA with the N1 and N10 positions of spermidine.","SPERMIDINE DISINAPOYL ACYLTRANSFERASE (SDT)","SPERMIDINE DISINAPOYL ACYLTRANSFERASE (SDT)"]
["AT2G46210","yellow","Fatty acid/sphingolipid desaturase;(source:Araport11)","SPHINGOID LCB DESATURASE 2 (SLD2)","SPHINGOID LCB DESATURASE 2 (SLD2); (ATSLD2)"]
["AT1G27360","yellow","In conjunction with SPL10 and SPL2, SPL11 redundantly controls proper development of lateral organs in association with shoot maturation in the reproductive phase. SPL2, SPL10, and SPL11, suppress root regeneration with age by inhibiting wound-induced auxin biosynthesis.","SQUAMOSA PROMOTER-LIKE 11 (SPL11)","SQUAMOSA PROMOTER-LIKE 11 (SPL11)"]
["AT3G57420","yellow","Regulates the assembly and trafficking of cellulose synthase complexes.","STELLO2 (STL2)","STELLO2 (STL2)"]
["AT2G26770","yellow","Encodes a plant-specific actin binding protein SCAB1 (STOMATAL CLOSURE-RELATED ACTIN BINDING PROTEIN1). SCAB1 stabilizes actin filaments and regulates stomatal movement.","STOMATAL CLOSURE-RELATED ACTIN BINDING PROTEIN 1 (SCAB1)","STOMATAL CLOSURE-RELATED ACTIN BINDING PROTEIN 1 (SCAB1)"]
["AT2G41290","yellow","Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity.","STRICTOSIDINE SYNTHASE-LIKE 2 (SSL2)","STRICTOSIDINE SYNTHASE-LIKE 2 (SSL2)"]
["AT1G53730","yellow","STRUBBELIG-receptor family 6;(source:Araport11)","STRUBBELIG-RECEPTOR FAMILY 6 (SRF6)","STRUBBELIG-RECEPTOR FAMILY 6 (SRF6)"]
["AT5G49190","yellow","Encodes a sucrose synthase (SUS2). The activity of the enzyme could not be assayed as proved to be insoluble (PMID 17257168). However, analyses of an sus2 mutant revealed a deficiency in sucrose synthase activity 12 and 15 days after flowering. There are some reports that SUS2 transcript levels are increased in leaves specifically by O(2) deficiency whereas other reports indicate that SUS2 is expressed only in seeds. Immulocalization shows that SUS2 is present in the cytosol of developing seeds, but, it also associated with plastids, though not located within them.","SUCROSE SYNTHASE 2 (SUS2)","SUCROSE SYNTHASE 2 (SUS2);SUCROSE SYNTHASE FROM ARABIDOPSIS (SSA); (ATSUS2)"]
["AT3G47990","yellow","SUGAR-INSENSITIVE 3;(source:Araport11)","SUGAR-INSENSITIVE 3 (SIS3)","SUGAR-INSENSITIVE 3 (SIS3)"]
["AT4G23950","yellow","Encodes a member of the mid-SUN subfamily of SUN-domain proteins. It is involved in early seed development and nuclear morphology.","SUN-DOMAIN PROTEIN 5 (SUN5)","SUN-DOMAIN PROTEIN 5 (SUN5); (ATSUN5)"]
["AT5G26980","yellow","member of SYP4 Gene Family; TGN localized. SYP4 group (SYP41, SYP42, and SYP43) represents the plant orthologs of the Tlg2/syntaxin16 Qa-SNARE (soluble N-ethylmaleimide sensitive factor attachment protein receptor) that localizes on the TGN in yeast and animal cells. The SYP4 group regulates the secretory and vacuolar transport pathways in the post-Golgi network and maintains the morphology of the Golgi apparatus and TGN. Consistent with a secretory role, SYP4 proteins are required for extracellular resistance responses to a fungal pathogen. Involved in the protection of chloroplasts from salicylic acid-dependent biotic stress.","SYNTAXIN OF PLANTS 41 (SYP41)","SYNTAXIN OF PLANTS 41 (SYP41); (ATTLG2A); (ATSYP41)"]
["AT5G44510","yellow","Encodes TAO1 (Target of AvrB Operation), a TIR-NB-LRR protein that contributes to disease resistance induced by the Pseudomonas syringae effector AvrB.","TARGET OF AVRB OPERATION1 (TAO1)","TARGET OF AVRB OPERATION1 (TAO1)"]
["AT1G62060","yellow","Encodes a member of a mucilage protein family. Predicted in silico to be glycosylated.","TESTA ABUNDANT 2 (TBA2)","TESTA ABUNDANT 2 (TBA2)"]
["AT3G14950","yellow","Encodes one of the 36 carboxylate clamp (CC)-tetratricopeptide repeat (TPR) proteins (Prasad 2010, Pubmed ID: 20856808) with potential to interact with Hsp90/Hsp70 as co-chaperones. The TTL family is required for osmotic stress tolerance and male sporogenesis.","TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 2 (TTL2)","TETRATRICOPETIDE-REPEAT THIOREDOXIN-LIKE 2 (TTL2)"]
["AT1G19080","yellow","This gene is predicted to encode a PSF3 component of the GINS complex. This complex has been implicated in the initiation of DNA replication in Xenopus. Mutations in this gene cause defects in embryo development.","TITAN 10 (TTN10)","TITAN 10 (TTN10);PARTNER OF SLD5 3 (PSF3)"]
["AT3G60220","yellow","Encodes a putative RING-H2 zinc finger protein ATL4 (ATL4).","TOXICOS EN LEVADURA 4 (ATL4)","TOXICOS EN LEVADURA 4 (ATL4);TOXICOS EN LEVADURA 4 (TL4)"]
["AT4G22590","yellow","Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)","TREHALOSE-6-PHOSPHATE PHOSPHATASE G (TPPG)","TREHALOSE-6-PHOSPHATE PHOSPHATASE G (TPPG)"]
["AT4G11090","yellow","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. Functions as a mannan O-acetyltransferase, catalyzing the 2-O and 3-O-monoacetylation of mannosyl residues.A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","TRICHOME BIREFRINGENCE-LIKE 23 (TBL23)","TRICHOME BIREFRINGENCE-LIKE 23 (TBL23);MANNAN O-ACETYLTRANSFERASE 1 (MOAT1)"]
["AT1G48880","yellow","Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).","TRICHOME BIREFRINGENCE-LIKE 7 (TBL7)","TRICHOME BIREFRINGENCE-LIKE 7 (TBL7)"]
["AT1G34060","yellow","Pyridoxal phosphate (PLP)-dependent transferases superfamily protein;(source:Araport11)","TRYPTOPHAN AMINOTRANSFERASE RELATED 4 (TAR4)","TRYPTOPHAN AMINOTRANSFERASE RELATED 4 (TAR4)"]
["AT3G52560","yellow","MMZ4/UEV1D encodes a protein that may play a role in DNA damage responses and error-free post-replicative DNA repair by participating in lysine-63-based polyubiquitination reactions. UEV1D-4, a predicted splice variant, can interact relatively weakly with UBC35/UBC13A and UBC36/UBC13B in a yeast-2-hybrid UEV1D-4 can also significantly, but not totally, functionally complement an mms2 mutation in budding yeast by increasing mms2 mutant viability in the presence of the DNA damaging agent MMS. uev1d-1 mutants are more sensitive than wild type plants to the DNA damaging agent MMS in seed germination and pollen germination assays.","UBIQUITIN E2 VARIANT 1D-4 (UEV1D-4)","UBIQUITIN E2 VARIANT 1D-4 (UEV1D-4)"]
["AT1G63800","yellow","ubiquitin-conjugating enzyme 5;(source:Araport11)","UBIQUITIN-CONJUGATING ENZYME 5 (UBC5)","UBIQUITIN-CONJUGATING ENZYME 5 (UBC5)"]
["AT1G10570","yellow","Encodes a deSUMOylating enzyme. In vitro it has both peptidase activity and isopeptidase activity: it can cleave the C-terminal residues from SUMO to activate it for attachment to a target protein and it can also act on the isopeptide bond between SUMO and another protein. sYFP:OTS2 protein accumulates in nuclei in a punctate pattern. Double mutant analysis with ULP1D/OTS1 indicates that these genes are involved in salt stress responses and flowering time regulation.","OVERLY TOLERANT TO SALT 2 (OTS2)","UB-LIKE PROTEASE 1C (ULP1C);OVERLY TOLERANT TO SALT 2 (OTS2)"]
["AT4G23010","yellow","UDP-galactose transporter 2;(source:Araport11)","UDP-GALACTOSE TRANSPORTER 2 (UTR2)","UDP-GALACTOSE TRANSPORTER 2 (UTR2)"]
["AT3G20830","yellow","AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein;(source:Araport11)","UNICORN-LIKE (UCNL)","UNICORN-LIKE (UCNL);AGC2 KINASE 4 (AGC2-4)"]
["AT1G25270","yellow","nodulin MtN21-like transporter family protein","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 24 (UMAMIT24)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 24 (UMAMIT24)"]
["AT4G15540","yellow","nodulin MtN21-like transporter family protein The mRNA is cell-to-cell mobile.","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 38 (UMAMIT38)","USUALLY MULTIPLE ACIDS MOVE IN AND OUT TRANSPORTERS 38 (UMAMIT38)"]
["AT2G01770","yellow","Encodes an iron transporter required for iron sequestration into vacuoles. Expressed in developing embryo and seed. Localized in the vacuolar membrane.","VACUOLAR IRON TRANSPORTER 1 (VIT1)","VACUOLAR IRON TRANSPORTER 1 (VIT1); (ATVIT1)"]
["AT4G27690","yellow","vacuolar protein sorting 26B;(source:Araport11)","VACUOLAR PROTEIN SORTING 26B (VPS26B)","VACUOLAR PROTEIN SORTING 26B (VPS26B)"]
["AT2G45870","yellow","Encodes a bestrophin-like protein (Best2). Minor isoform (10% transcript of AtBest1). Putative chloride ion channel. Proposed to modulate proton motive force partitioning by mediating chloride ion influx in the thylakoid lumen.","VCCN2 (VCCN2)","VCCN2 (VCCN2)"]
["AT1G26670","yellow","member of VTI1 Gene Family. Normally localizes to the transgolgi network and plasma membrane. A dominant mutation (zip1) alters the subcellular localization of VTI12 and suppresses loss of function mutation (zag1) of VTI11. Interacts with members of the SYP family. Involved in protein trafficking to protein storage vacuoles.","VESICLE TRANSPORT V-SNARE 1B (VTI1B)","VESICAL TRANSPORT V-SNARE 12 (VTI12); (ATVTI12);VESICLE TRANSPORT V-SNARE 1B (VTI1B)"]
["AT5G57320","yellow","actin filament bundling protein P-115-ABP protein;(source:Araport11)","VILLIN 5 (VLN5)","VILLIN 5 (VLN5)"]
["AT4G15120","yellow","VQ motif-containing protein;(source:Araport11)","VQ27 MOTIF-CONTAINING PROTEIN (VQ27)","VQ27 MOTIF-CONTAINING PROTEIN (VQ27)"]
["AT3G04670","yellow","member of WRKY Transcription Factor; Group II-d","WRKY DNA-BINDING PROTEIN 39 (WRKY39)","WRKY DNA-BINDING PROTEIN 39 (WRKY39);WRKY DNA-BINDING PROTEIN 39 (ATWRKY39)"]
["AT5G12420","yellow","WSD7 can function in vitro as wax ester synthase but does not appear to be essential for cuticular wax biosynthesis.","WS /DGAT 7 (WSD7)","WS /DGAT 7 (WSD7)"]
["AT3G18010","yellow","Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. Its mRNA is expressed in the initiating vascular primordium of the cotyledons during heart and torpedo stages.","WUSCHEL RELATED HOMEOBOX 1 (WOX1)","WUSCHEL RELATED HOMEOBOX 1 (WOX1)"]
["AT5G17810","yellow","Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. Together with WOX11, WOX12 is involved in de novo root organogenesis.","WUSCHEL RELATED HOMEOBOX 12 (WOX12)","WUSCHEL RELATED HOMEOBOX 12 (WOX12)"]
["AT5G07270","yellow","hypothetical protein;(source:Araport11)","XB3 ORTHOLOG 3 IN ARABIDOPSIS THALIANA (XBAT33)","XB3 ORTHOLOG 3 IN ARABIDOPSIS THALIANA (XBAT33)"]
["AT1G08465","yellow","Member of the YABBY family of Arabidopsis proteins involved in the abaxial cell fate specification in lateral organs","YABBY2 (YAB2)","YABBY2 (YAB2)"]
["AT5G24380","yellow","closest Arabidopsis homolog of Zea maize metal-phytosiderophore/metal-nicotianamine transporter ZmYS1","YELLOW STRIPE LIKE 2 (YSL2)","YELLOW STRIPE LIKE 2 (ATYSL2);YELLOW STRIPE LIKE 2 (YSL2)"]

{"sheet":"Supplemental Data Set 5","index":5,"n_rows":335,"n_cols":6,"rows_kept":335}
["Supplemental Data Set 5. List of TFs identified using TF2Network and in the WGNA analysis."]
[]
["Locus Identifier","Gene Model Name","Gene Model Description","Gene Model Type","Primary Gene Symbol","All Gene Symbols"]
["AT1G01030","AT1G01030.1","Member of the RAV family of DNA binding proteins. Contains B3 domain. Component of transcriptional regulatory complex directing stigma development","protein_coding","NGATHA3 (NGA3)","NGATHA3 (NGA3)"]
["AT1G01060","AT1G01060.1","LHY encodes a myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1","protein_coding","LATE ELONGATED HYPOCOTYL (LHY)","LATE ELONGATED HYPOCOTYL 1 (LHY1);LATE ELONGATED HYPOCOTYL (LHY)"]
["AT1G01250","AT1G01250.1","encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.","protein_coding"]
["AT1G01260","AT1G01260.1","bHLH13 interacts with JAZ proteins, and functions redundantly with bHLH3, bHLH14 and bHLH17 to negatively regulate jasmonate responses.","protein_coding","JASMONATE ASSOCIATED MYC2 LIKE 2 (JAM2)","JASMONATE ASSOCIATED MYC2 LIKE 2 (JAM2); (BHLH13); (BHLH013)"]
["AT1G01520","AT1G01520.1","RVE3 is one of eleven homologous MYB-like transcription factors in Arabidopsis and a member of the RVE8 clade. Plays a minor role in clock regulation.","protein_coding","ALTERED SEED GERMINATION 4 (ASG4)","ALTERED SEED GERMINATION 4 (ASG4);REVEILLE 3 (REV3)"]
["AT1G01720","AT1G01720.1","Belongs to a large family of putative transcriptional activators with NAC domain. Transcript level increases in response to wounding and abscisic acid. ATAF1 attentuates ABA signaling and sythesis. Mutants are hyposensitive to ABA. The mRNA is cell-to-cell mobile.","protein_coding","(ATAF1)","(ATAF1); (ANAC2);ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 2 (ANAC002)"]
["AT1G03040","AT1G03040.3","Governs the competence of pericycle cells to initiate lateral root primordium formation.","protein_coding","(BHLH007)","(BHLH007);PERICYCLE FACTOR TYPE-B 2 (PFB2)"]
["AT1G03840","AT1G03840.1","MGP is a nuclear-localized putative transcription factor with three zinc finger domains. MGP can interact with three proteins implicated in root patterning: SCR, SHR, and JKD in Y2H assays, and these interactions depend on the first zinc finger in MGP. MGP appears to be a direct transcriptional target of SHR and SCR, based on promoter binding assays, though it is not expressed in the QC, based on in situ hybridizations.","protein_coding","MAGPIE (MGP)","MAGPIE (MGP);INDETERMINATE DOMAIN 3 (IDD3)"]
["AT1G03970","AT1G03970.1","encodes a basic leucine zipper G-box binding factor that can bind to G-box motifs only as heterodimers with GBF2 or GBF3. A single amino acid change can confer G-box binding as homodimers.","protein_coding","G-BOX BINDING FACTOR 4 (GBF4)","G-BOX BINDING FACTOR 4 (GBF4)"]
["AT1G05230","AT1G05230.1","Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. Mutants have trichomes that appear glass-like under a dissecting microscope as compared to the wild-type trichomes. The mutations do not affect trichome growth or branch number.","protein_coding","HOMEODOMAIN GLABROUS 2 (HDG2)","HOMEODOMAIN GLABROUS 2 (HDG2)"]
["AT1G06070","AT1G06070.1","Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11)","protein_coding","BASIC LEUCINE-ZIPPER 69 (BZIP69)","BASIC LEUCINE-ZIPPER 69 (BZIP69)"]
["AT1G06180","AT1G06180.1","member of MYB3R- and R2R3- type MYB- encoding genes","protein_coding","MYB DOMAIN PROTEIN 13 (MYB13)","MYB DOMAIN PROTEIN 13 (ATMYB13); (ATMYBLFGN);MYB DOMAIN PROTEIN 13 (MYB13)"]
["AT1G07640","AT1G07640.3","A member of the DOF transcription factors. Prominently expressed in the phloem of leaves and other organs. Expression is induced by wounding, MeJA and insect feeding. Upregulates glucosinolate biosynthesis. PEAR protein involved in the formation of a short-range concentration gradient that peaks at protophloem sieve elements, and activates gene expression that promotes radial growth. Locally promotes transcription of inhibitory HD-ZIP III genes, and thereby establishes a negative-feedback loop that forms a robust boundary that demarks the zone of cell division.","protein_coding","(OBP2)","(OBP2);UAS-TAGGED ROOT PATTERNING3 (URP3)"]
["AT1G08000","AT1G08000.1","Encodes a member of the GATA factor family of zinc finger transcription factors.","protein_coding","GATA TRANSCRIPTION FACTOR 10 (GATA10)","GATA TRANSCRIPTION FACTOR 10 (GATA10)"]
["AT1G08010","AT1G08010.1","Encodes a member of the GATA factor family of zinc finger transcription factors.","protein_coding","GATA TRANSCRIPTION FACTOR 11 (GATA11)","GATA TRANSCRIPTION FACTOR 11 (GATA11)"]
["AT1G08320","AT1G08320.1","bZIP transcription factor family protein;(source:Araport11)","protein_coding","TGACG (TGA) MOTIF-BINDING PROTEIN 9 (TGA9)","(bZIP21);TGACG (TGA) MOTIF-BINDING PROTEIN 9 (TGA9)"]
["AT1G08810","AT1G08810.1","putative transcription factor of the R2R3-MYB gene family. Transcript increases under conditions that promote stomatal opening (white and blue light, abi1-1 mutation) and decreases under conditions that trigger stomatal closure (ABA, desiccation, darkness), with the exception of elevated CO2. Expressed exclusively in guard cells of all tissues. It is required for light-induced opening of stomata. Mutant shows reduced stomatal aperture which helps to limit water loss during drought.","protein_coding","MYB DOMAIN PROTEIN 60 (MYB60)","MYB DOMAIN PROTEIN 60 (MYB60);MYB DOMAIN PROTEIN 60 (AtMYB60)"]
["AT1G09530","AT1G09530.1","Transcription factor interacting with photoreceptors phyA and phyB. Forms a ternary complex in vitro with G-box element of the promoters of LHY, CCA1. Acts as a negative regulator of phyB signalling. It degrades rapidly after irradiation of dark grown seedlings in a process controlled by phytochromes. Does not play a significant role in controlling light input and function of the circadian clockwork. Binds to G- and E-boxes, but not to other ACEs. Binds to anthocyanin biosynthetic genes in a light- and HY5-independent fashion. PIF3 function as a transcriptional activator can be functionally and mechanistically separated from its role in repression of PhyB mediated processes.","protein_coding","PHYTOCHROME INTERACTING FACTOR 3 (PIF3)","PURPLE ACID PHOSPHATASE 3 (PAP3);PHYTOCHROME INTERACTING FACTOR 3 (PIF3);PHOTOCURRENT 1 (POC1);PHYTOCHROME-ASSOCIATED PROTEIN 3 (PAP3)"]
["AT1G09540","AT1G09540.1","Encodes putative transcription factor. Mutants lack of mucilage extrusion from the seeds during imbibition. Reduced quantities of mucilage are deposited during the development of the seed coat epidermis in myb61 mutants. Expressed in guard cells,loss of function mutations show an increase in stomatal pore opening suggesting a role in ABA independent regulation of stomatal pore size.","protein_coding","MYB DOMAIN PROTEIN 61 (MYB61)","MYB DOMAIN PROTEIN 61 (MYB61);ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 61 (ATMYB61)"]
["AT1G10120","AT1G10120.1","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)","protein_coding","CRY2-INTERACTING BHLH 4 (CIB4)","CRY2-INTERACTING BHLH 4 (CIB4)"]
["AT1G10480","AT1G10480.1","Encodes a zinc finger protein containing only a single zinc finger that acts downstream of ZFP6 in regulating trichome development by integrating GA and cytokinin signaling.","protein_coding","ZINC FINGER PROTEIN 5 (ZFP5)","ZINC FINGER PROTEIN 5 (ZFP5)"]
["AT1G13450","AT1G13450.1","Encodes GT-1, a plant transcription factor that binds to one of the cis-acting elements, BoxII, which resides within the upstream promoter region of light-responsive genes. GT-1 was assumed to act as a molecular switch modulated through Ca(2+)-dependent phosphorylation/dephosphorylation in response to light signals.","protein_coding","GT-1 (GT-1)","GT-1 (GT-1)"]
["AT1G14580","AT1G14580.3","C2H2-like zinc finger protein;(source:Araport11)","protein_coding","(ATIDD6)","(ATIDD6)"]
["AT1G14900","AT1G14900.1","Encodes a protein belonging to the subgroup of HMGA (high mobility group A) proteins that interact with A/T-rich stretches of DNA.","protein_coding","HIGH MOBILITY GROUP A (HMGA)","HIGH MOBILITY GROUP A (HMGA)"]
["AT1G16490","AT1G16490.1","Member of the R2R3 factor gene family.","protein_coding","MYB DOMAIN PROTEIN 58 (MYB58)","MYB DOMAIN PROTEIN 58 (AtMYB58);MYB DOMAIN PROTEIN 58 (MYB58)"]
["AT1G17950","AT1G17950.1","R2R3-MYB transcription family. Absence of the MYB52 transcription factor is correlated with an increase in PME activity and a decrease in the degree of pectin methylesterification. Transcriptionally activates PECTIN METHYLESTERASE INHIBITOR6 (PMEI6), PMEI14, and SUBTILISIN-LIKE SER PROTEASE1.7 (SBT1.7) by binding to their promoters. MYB52 can bind to the same regulatory regions as the ERF4 transcriptional represssor.","protein_coding","MYB DOMAIN PROTEIN 52 (MYB52)","MYB DOMAIN PROTEIN 52 (ATMYB52); (BW52);MYB DOMAIN PROTEIN 52 (MYB52)"]
["AT1G18330","AT1G18330.2","EARLY-PHYTOCHROME-RESPONSIVE1","protein_coding","EARLY-PHYTOCHROME-RESPONSIVE1 (EPR1)","EARLY-PHYTOCHROME-RESPONSIVE1 (EPR1);REVEILLE 7 (RVE7)"]
["AT1G19350","AT1G19350.3","Encodes brassinosteroid (BR) signalling protein that accumulates in the nucleus as dephosphorylated form in response to BRs. Is phosphorylated by the BIN2 GSK3 kinase. It synergistically interacts with BIM1 to bind to E box sequences (CANNTG). The protein contains a nuclear localization signal (NLS), followed by a highly conserved amino-terminal domain (N) shared by all family members, a BIN2 phosphorylation domain (P), a PEST motif, involved in protein degradation in the absence of BR, and a carboxyl-terminal domain. BES1 can interact with the ELF6 and REF6 Jumonji N/C-domain containing proteins and may direct them to modify histone methylation upstream of some brassinosteroid responsive-genes. Works with BRAVO to regulate QC division in the root. AT1G19350.3(BES1-L) is the long isoform of BES1. It contains an additive N-terminal NLS compared with the canonical BES1-S. This recently evolved isoform is expressed specifically in the Arabidopsis lineage","protein_coding","BRI1-EMS-SUPPRESSOR 1 (BES1)","BRI1-EMS-SUPPRESSOR 1 (BES1);BRASSINAZOLE-RESISTANT 2 (BZR2); (BES1-L)"]
["AT1G20640","AT1G20640.1","(NODULE INCEPTION)-LIKE PROTEIN, together with NLP5 controls a rhizobia-induced decrease in cell elongation rates, while additional cell divisions occurred independently of NLP4.","protein_coding","NIN-LIKE PROTEIN 4 (NLP4)","NIN-LIKE PROTEIN 4 (NLP4)"]
["AT1G22190","AT1G22190.1","The gene encodes a putative transcription factor belongings to the abiotic stress-associated DREB A-6 clade. The mRNA is cell-to-cell mobile.","protein_coding","RELATED TO AP2 4 (RAP2.4)","(ERF58);RELATED TO AP2.4D (RAP2.4D); (WIND2);OAS HIGH ACCUMULATION 1 (OSH1);RELATED TO AP2 4 (RAP2.4)"]
["AT1G22985","AT1G22985.1","encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.","protein_coding","CYTOKININ RESPONSE FACTOR 7 (CRF7)","CYTOKININ RESPONSE FACTOR 7 (CRF7)"]
["AT1G25550","AT1G25550.1","Member of HHO/HRS GARP type transcriptional repressor family. Involved in Pi uptake and Pi starvation signaling. Transcriptional repressors that functions with other NIGT genes as an important hub in the nutrient signaling network associated with the acquisition and use of nitrogen and phosphorus.","protein_coding","HRS1 HOMOLOG3 (HHO3)","HRS1 HOMOLOG3 (HHO3);NITRATE-INDUCIBLE, GARP-TYPE TRANSCRIPTIONAL REPRESSOR 1/HYPERSENSITIVE TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1.1 (NIGT1.1)"]
["AT1G26260","AT1G26260.1","Encodes CIB5 (cryptochrome-interacting basic-helix-loop-helix). Related to CIB1 (AT4G34530). CIB5 interacts with CRY2 and forms heterodimer with CIB1 in vitro. Regulates flowering time redundantly with CIB1.","protein_coding","CRYPTOCHROME-INTERACTING BASIC-HELIX-LOOP-HELIX 5 (CIB5)","CRYPTOCHROME-INTERACTING BASIC-HELIX-LOOP-HELIX 5 (CIB5)"]
["AT1G27730","AT1G27730.1","Related to Cys2/His2-type zinc-finger proteins found in higher plants. Compensated for a subset of calcineurin deficiency in yeast. Salt tolerance produced by ZAT10 appeared to be partially dependent on ENA1/PMR2, a P-type ATPase required for Li+ and Na+ efflux in yeast. The protein is localized to the nucleus, acts as a transcriptional repressor and is responsive to chitin oligomers. Also involved in response to photooxidative stress.","protein_coding","SALT TOLERANCE ZINC FINGER (STZ)","SALT TOLERANCE ZINC FINGER (STZ); (ZAT10)"]
["AT1G28160","AT1G28160.1","encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.","protein_coding"]
["AT1G28360","AT1G28360.1","encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ERF12). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. Regulates floral development.","protein_coding","ERF DOMAIN PROTEIN 12 (ERF12)","ERF DOMAIN PROTEIN 12 (ERF12);ERF DOMAIN PROTEIN 12 (ATERF12);ETHYLENE RESPONSE FACTOR12 (ERF12)"]
["AT1G28370","AT1G28370.2","encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.","protein_coding"]
["AT1G28420","AT1G28420.1","homeobox-1;(source:Araport11)","protein_coding","HOMEOBOX-1 (HB-1)","HOMEOBOX-1 (HB-1);RINGLET 1 (RLT1)"]
["AT1G29160","AT1G29160.1","Encodes a DOF transcription factor involved in seed coat development. Regulates PRX2 and PRX25, involved in seed longevity.","protein_coding","COGWHEEL1 (COG1)","COGWHEEL1 (COG1)"]
["AT1G30210","AT1G30210.1","TCP family protein involved in heterochronic regulation of leaf differentiation. Represses photomorphogenic growth in miR319-dependent manner. Together with TCP4, 2, 3 and 10 enhances hypocotyl cell elongation by directly activating YUC5.","protein_coding","TEOSINTE BRANCHED 1, CYCLOIDEA, AND PCF FAMILY 24 (TCP24)","TEOSINTE BRANCHED 1, CYCLOIDEA, AND PCF FAMILY 24 (TCP24); (ATTCP24)"]
["AT1G30490","AT1G30490.1","Dominant PHV mutations cause transformation of abaxial leaf fates into adaxial leaf fates. Has overlapping functions with PHABULOSA, REVOLUTA and CORONA/ATHB15 in patterning the apical portion of the embryo. Encodes a member of HD-Zip family which contains homeodomain-leucine zipper domains and domain similar to a mammalian sterol binding domain.","protein_coding","PHAVOLUTA (PHV)","(ATHB9);PHAVOLUTA (PHV)"]
["AT1G32150","AT1G32150.1","Encodes a G group bZIP transcription factor family member that can bind cis elements with an ACGT core, such as G-box, Hex, C-box and As-1. The protein is localized in the nucleus and can homodimerize and can heterodimerize with other G group members.","protein_coding","BASIC REGION/LEUCINE ZIPPER TRANSCRIPTION FACTOR 68 (bZIP68)","BASIC REGION/LEUCINE ZIPPER TRANSCRIPTION FACTOR 68 (bZIP68); (AtbZIP68)"]
["AT1G32240","AT1G32240.1","Encodes a member of the KANADI family of putative transcription factors. Together with KAN1, this gene appears to be involved in the development of the carpel and the outer integument of the ovule.Along with KAN1 and KAN4 appears to regulate the proper localization of PIN1 in early embryogenesis.","protein_coding","KANADI 2 (KAN2)","KANADI 2 (KAN2)"]
["AT1G32640","AT1G32640.1","Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif and interacts with Jasmonate ZIM-domain proteins. MYC2 interacts with EIN3 and EIL1 to repress hook curvature and resistance to Botrytis cinera.Its transcription is induced by dehydration stress, ABA treatment and blue light via CRY1. Negative regulator of blue light-mediated photomorphogenic growth and blue and far-red-light-regulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. For example it binds to and regulates the expression of NST1. Its stability is modulated by PUB10 through polyubiquitination.","protein_coding","(MYC2)","(ATMYC2); (RD22BP1);JASMONATE INSENSITIVE 1 (JAI1);JASMONATE INSENSITIVE 1 (JIN1); (MYC2); (ZBF1)"]
["AT1G33240","AT1G33240.1","Encodes a plant transcriptional activator that contains two separate, but similar, trihelix DNA-binding domains, similar to GT-2. Gene is expressed in all aerial parts of the plant, with higher level of expression in siliques. At-GTL2 was thought to be a duplicated copy of this gene but is likely to be a cloning artefact, the result of a chimeric clone. Regulates ploidy-dependent cell growth in trichome.","protein_coding","GT-2-LIKE 1 (GTL1)","GT2-LIKE 1 (AT-GTL1); (ATGTL1);GT-2-LIKE 1 (GTL1);GT2-LIKE 2 (AT-GTL2)"]
["AT1G35460","AT1G35460.1","Encodes a bHLH transcription factor involved in CFL1-mediated regulation of cuticle development. Overexpression leads to abnormal cuticle development.","protein_coding","FLOWERING BHLH 1 (FBH1)","FLOWERING BHLH 1 (FBH1);ATCFL1 ASSOCIATED PROTEIN 2 (CFLAP2)"]
["AT1G36060","AT1G36060.1","Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.Overexpression results in increased drought tolerance and vitrified leaves. Binds to DRE/GCC promoter elements and activates expression of aquaporin genes AtTIP1;1, AtTIP2;3, and AtPIP2;2.Involved in light induced suppression of germination via regulation of PIF1 and SOM expression. Its DNA binding activity is regulated by phyA and phyB.","protein_coding","TRANSLUCENT GREEN (TG)","TRANSLUCENT GREEN (TG); (WIND3); (ERF55)"]
["AT1G42990","AT1G42990.1","bZIP60 consists of a bZIP DNA binding domain followed by a putative transmembrane domain. bZIP60 mRNA is upregulated by the addition of ER stress inducers, tunicamycin (inhibitor of N-linked glycosylation), DTT (inhibitor of disulfide bond formation) and azetin-2-carboxylate (proline analog perturbing protein structure). Upon ER stress, bZIP60 mRNA is spliced by IRE1A and IRE1B to produce bZIP60-S, an active transcription factor without the transmembrane domain. bZIP60-U, a product of unspliced form of bZIP60 mRNA, is localized at the ER membrane and bZIP60-S is localized in the nucleus.","protein_coding","BASIC REGION/LEUCINE ZIPPER MOTIF 60 (BZIP60)","BASIC REGION/LEUCINE ZIPPER MOTIF 60 (ATBZIP60);BBASIC REGION/LEUCINE ZIPPER MOTIF 60 (BZIP60);BASIC REGION/LEUCINE ZIPPER MOTIF 60 (BZIP60)"]
["AT1G43160","AT1G43160.1","encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family (RAP2.6). The protein contains one AP2 domain. There are 7 members in this subfamily.","protein_coding","RELATED TO AP2 6 (RAP2.6)","RELATED TO AP2 6 (RAP2.6);ETHYLENE RESPONSIVE FACTOR113 (ERF113)"]
["AT1G45249","AT1G45249.6","Leucine zipper transcription factor that binds to the abscisic acid (ABA)?responsive element (ABRE) motif in the promoter region of ABA-inducible genes. Enhances drought tolerance in vegetative tissues. Required for normal glucose response. Localized in the nucleus. Expressed constitutively in roots, leaf vascular tissues, and hydathodes or in all tissues under stress conditions. It Primes phosphorylated by a ABA-activated 42-KDa kinase. Overexpression of the phosphorylated active form of AREB1 expressed many ABA-inducible genes, such as RD29B, without ABA treatment.","protein_coding"]
["AT1G46264","AT1G46264.1","Encodes SCHIZORIZA, a member of Heat Shock Transcription Factor (Hsf) family. Functions as a nuclear factor regulating asymmetry of stem cell divisions.","protein_coding","HEAT SHOCK TRANSCRIPTION FACTOR B4 (HSFB4)","(AT-HSFB4);HEAT SHOCK TRANSCRIPTION FACTOR B4 (HSFB4);SCHIZORIZA (SCZ)"]
["AT1G46768","AT1G46768.1","encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.1). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.9 and RAP2.10.","protein_coding","RELATED TO AP2 1 (RAP2.1)","RELATED TO AP2 1 (RAP2.1)"]
["AT1G48610","AT1G48610.1","AT hook motif-containing protein;(source:Araport11)","protein_coding"]
["AT1G49010","AT1G49010.1","Duplicated homeodomain-like superfamily protein;(source:Araport11)","protein_coding","(MYBS1)","(MYBS1)"]
["AT1G49480","AT1G49480.1","Encodes a nuclear-localized DNA-binding protein that interacts with ITN1 at the PM and nuclei in vivo and may regulate ITN's subcellular localization.","protein_coding","RELATED TO VERNALIZATION1 1 (RTV1)","RELATED TO VERNALIZATION1 1 (RTV1)"]
["AT1G49560","AT1G49560.1","Homeodomain-like superfamily protein;(source:Araport11)","protein_coding","HRS1 HOMOLOG6 (HHO6)","HRS1 HOMOLOG6 (HHO6)"]
["AT1G49720","AT1G49720.2","Identified as a protein that binds to abscisic acid response elements. May mediate transcriptional regulation of ABA responses.","protein_coding","ABSCISIC ACID RESPONSIVE ELEMENT-BINDING FACTOR 1 (ABF1)","(ATABF1);ABSCISIC ACID RESPONSIVE ELEMENT-BINDING FACTOR 1 (ABF1)"]
["AT1G50640","AT1G50640.1","encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-3). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.","protein_coding","ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3 (ERF3)","ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 3 (ERF3); (ATERF3)"]
["AT1G51140","AT1G51140.1","Encodes a basic helix-loop-helix-type transcription factor involved in photoperiodism flowering. Binds to the E-box cis-element in the CONSTANS (CO) promoter to regulate flowering. Interacts with CFL1 and along with CFLAP2 negatively regulates cuticle development. Binds to the potassium channel gene KAT1 as a dimer. The DNA-binding capacity is inhibited in response to ABA through phosphorylation-dependent monomerization.","protein_coding","FLOWERING BHLH 3 (FBH3)","FLOWERING BHLH 3 (FBH3);ABA-RESPONSIVE KINASE SUBSTRATE 1 (AKS1);ATCFL1 ASSOCIATED PROTEIN 1 (CFLAP1)"]
["AT1G51600","AT1G51600.1","member of a novel family of plant-specific GATA-type transcription factors.","protein_coding","ZIM-LIKE 2 (ZML2)","ZIM-LIKE 2 (ZML2); (TIFY2A);GATA TRANSCRIPTION FACTOR 28 (GATA28)"]
["AT1G51700","AT1G51700.1","Encodes dof zinc finger protein (adof1). The mRNA is cell-to-cell mobile.","protein_coding","DOF ZINC FINGER PROTEIN 1 (DOF1)","DOF ZINC FINGER PROTEIN 1 (ADOF1);DOF ZINC FINGER PROTEIN 1 (DOF1)"]
["AT1G52150","AT1G52150.2","Member of the class III HD-ZIP protein family. Contains homeodomain and leucine zipper domain. Critical for vascular development and negatively regulates vascular cell differentiation.","protein_coding","(ATHB-15)","(ATHB-15); (HB15); (ATHB15);CORONA (CNA);INCURVATA 4 (ICU4)"]
["AT1G53170","AT1G53170.1","encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-8). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.","protein_coding","ETHYLENE RESPONSE FACTOR 8 (ERF8)","ETHYLENE RESPONSE ELEMENT BINDING FACTOR 4 (ATERF8);ETHYLENE RESPONSE FACTOR 8 (ERF8); (ATERF-8)"]
["AT1G53230","AT1G53230.1","Encodes a member of a recently identified plant transcription factor family that includes Teosinte branched 1, Cycloidea 1, and proliferating cell nuclear antigen (PCNA) factors, PCF1 and 2. Regulated by miR319. Involved in heterochronic regulation of leaf differentiation. Elongates hypocotyl when miR319-resistant version is overexpressed. Suppresses auxin response by activating IAA3/SHY2 and SAUR genes.","protein_coding","TEOSINTE BRANCHED 1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 3 (TCP3)","TEOSINTE BRANCHED 1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 3 (TCP3)"]
["AT1G53910","AT1G53910.1","Encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. Involved in oxygen sensing. It plays a key role in controlling root bending in response to hypoxia.","protein_coding","RELATED TO AP2 12 (RAP2.12)","RELATED TO AP2 12 (RAP2.12);ETHYLENE RESPONSE FACTOR 74 (ERF74)"]
["AT1G54060","AT1G54060.1","Member of the trihelix DNA binding protein family. Nuclear localized. Involved in repressing seed maturation genes during seed germination and seedling development.","protein_coding","6B-INTERACTING PROTEIN 1-LIKE 1 (ASIL1)","6B-INTERACTING PROTEIN 1-LIKE 1 (ASIL1)"]
["AT1G55110","AT1G55110.1","indeterminate(ID)-domain 7;(source:Araport11)","protein_coding","INDETERMINATE(ID)-DOMAIN 7 (IDD7)","INDETERMINATE(ID)-DOMAIN 7 (AtIDD7); (REDSTART);INDETERMINATE(ID)-DOMAIN 7 (IDD7)"]
["AT1G59640","AT1G59640.2","A basic helix-loop-helix encoding gene (BIGPETAL, BPE) involved in the control of petal size. BPE is expressed via two mRNAs derived from an alternative splicing event. The BPEub (AT1G59640.1)transcript is expressed ubiquitously, whereas the BPEp (AT1G59640.2) transcript is preferentially expressed in petals. Plants that lack the petal-expressed variant BPEp have larger petals as a result of increased cell size. BPEp is positively regulated downstream of APETALA3, PISTILLATA, APETALA1 and PISTILLATA3 and is negatively regulated downstream of AGAMOUS.","protein_coding","BIG PETAL P (BPEP)","BIG PETAL P (BPEP);BIG PETAL (BPE); (ZCW32)"]
["AT1G59750","AT1G59750.1","Encodes a member of the auxin response factor family. ARFs bind to the cis element 5'-TGTCTC-3' ARFs mediate changes in gene expression in response to auxin. ARF's form heterodimers with IAA/AUX genes. ARF1 enhances mutant phenotypes of ARF2 and may act with ARF2 to control aspects of maturation and senescence.ARF1:LUC and 3xHA:ARF1 proteins have a half-life of ~3-4 hours and their degradation is reduced by proteasome inhibitors. 3xHA:ARF1 degradation is not affected by a pre-treatment with IAA. A nuclear-targeted fusion protein containing the middle region of ARF1 linked to LUC:NLS has a similar half-life to the full-length ARF1:LUC construct. The degradation of 3xHA:ARF1 is not affected in an axr6-3 mutant grown at room temperature, although the degradation of AXR2/IAA7 is slowed under these conditions.","protein_coding","AUXIN RESPONSE FACTOR 1 (ARF1)","AUXIN RESPONSE FACTOR 1 (ARF1)"]
["AT1G64380","AT1G64380.1","encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.","protein_coding","(ERF61)","(ERF61)"]
["AT1G64620","AT1G64620.1","Plant-specific Dof transcription factor which regulates vascular cell differentiation and lignin biosynthesis.","protein_coding","(DOF1.8)","(DOF1.8); (VDOF2)"]
["AT1G68550","AT1G68550.1","encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.","protein_coding","CYTOKININ RESPONSE FACTOR 10 (CRF10)","CYTOKININ RESPONSE FACTOR 10 (CRF10)"]
["AT1G68670","AT1G68670.1","HHO2 is a HRS1 homolog. Nitrate-inducible expression. Also induced in roots by low Pi and is likely involved in maintaining phosphate homeostasis. It is target of PHR1.Both HHO2 and HRS1 are involved in Ni cross regulation of Pi signaling. They function as transcriptional repressors of SPX1, SPX2, and SPX4 as part of a cascade to regulate nitrogen and phosphorus balance. Transcriptional repressors that functions with other NIGT genes as an important hub in the nutrient signaling network associated with the acquisition and use of nitrogen and phosphorus.","protein_coding","(HHO2)","(HHO2);NITRATE-INDUCIBLE, GARP-TYPE TRANSCRIPTIONAL REPRESSOR 1/HYPERSENSITIVE TO LOW PI-ELICITED PRIMARY ROOT SHORTENING 1.2 (NIGT1.2)"]
["AT1G68920","AT1G68920.1","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)","protein_coding","CIB1 LIKE PROTEIN 1 (CIL1)","(BHLH49);CIB1 LIKE PROTEIN 1 (CIL1)"]
["AT1G69010","AT1G69010.1","Encodes BES1-INTERACTING MYC-LIKE 2 (BIM2), a PAR1 (PHYTOCHROME RAPIDLY REGULATED 1)-interacting protein that positively modulates the shade avoidance syndrome in Arabidopsis seedlings.","protein_coding","BES1-INTERACTING MYC-LIKE PROTEIN 2 (BIM2)","BES1-INTERACTING MYC-LIKE PROTEIN 2 (BIM2)"]
["AT1G69490","AT1G69490.1","Encodes a member of the NAC transcription factor gene family. It is expressed in floral primordia and upregulated by AP3 and PI. Its expression is associated with leaf senescence. The mRNA is cell-to-cell mobile.","protein_coding","NAC-LIKE, ACTIVATED BY AP3/PI (NAP)","NAC-LIKE, ACTIVATED BY AP3/PI (NAP);ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 29 (ANAC029);NAC-LIKE, ACTIVATED BY AP3/PI (ATNAP)"]
["AT1G69570","AT1G69570.1","CDF5 is a circadian regulated transcript that is antiphasic with respect to its natural antisense transcript (NAT) FLORE (AT1G69572).CDF5 transcript accumulation delays flowering. CDF5 links circadian oscillation and photoperiodism.","protein_coding","CYCLING DOF FACTOR 5 (CDF5)","CYCLING DOF FACTOR 5 (CDF5)"]
["AT1G71130","AT1G71130.1","encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.","protein_coding","CYTOKININ RESPONSE FACTOR 8 (CRF8)","CYTOKININ RESPONSE FACTOR 8 (CRF8);ETHYLENE RESPONSE FACTOR 70 (ERF070); (ATERF070)"]
["AT1G72010","AT1G72010.1","Modulates GA-dependent stamen filament elongation by direct activation of SAUR63 subfamily genes through conserved target sites in their promoters. Promotes together with TCP7, 8, 14, 15, 21, and 23 endoreduplication-dependent cell expansion in leaf.","protein_coding","TCP DOMAIN PROTEIN 22 (TCP22)","TCP DOMAIN PROTEIN 22 (TCP22); (ATTCP22)"]
["AT1G72050","AT1G72050.3","Encodes a transcriptional factor TFIIIA required for transcription of 5S rRNA gene. 5S rRNA is the smallest constituent of the ribosome. Work on one of the gene models AT1G72050.2 showed that it encodes a protein with nine Cys(2)-His(2)-type zinc fingers, a characteristic feature of TFIIIA proteins. AT1G72050.2 also contains a 23 amino acid spacer between fingers 1 and 2, a 66 amino acid spacer between fingers 4 and 5, and a 50 amino acid non-finger C-terminal tail. in vitro assay demonstrated that AT1g72050.2 binds to 5S rDNA and efficiently stimulates the transcription of 5S rRNA. AT1g72050.2 also binds to 5S rRNA in vitro. AT1g72050.2 is located at several nuclear foci including the nucleolus and is absent from the cytoplasm.","protein_coding"]
["AT1G72360","AT1G72360.2","Encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.","protein_coding","ETHYLENE RESPONSE FACTOR 73 (ERF73)","HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 1 (HRE1); (AtERF73);ETHYLENE RESPONSE FACTOR 73 (ERF73)"]
["AT1G73730","AT1G73730.1","Encodes a putative transcription factor involved in ethylene and sulfate starvation signalling. Isolated DNA binding domain has been shown to bind DNA in vitro.","protein_coding","ETHYLENE-INSENSITIVE3-LIKE 3 (EIL3)","ETHYLENE-INSENSITIVE3-LIKE 3 (EIL3);SULFUR LIMITATION 1 (SLIM1);ARABIDOPSIS THALIANA SULFUR LIMITATION 1 (ATSLIM); (AtEIL3)"]
["AT1G74650","AT1G74650.1","Member of the R2R3 factor gene family; wax regulator associated with reproductive development.","protein_coding","MYB DOMAIN PROTEIN 31 (MYB31)","(ATY13);ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 31 (ATMYB31);MYB DOMAIN PROTEIN 31 (MYB31)"]
["AT1G75080","AT1G75080.1","Encodes a positive regulator of the brassinosteroid (BR) signalling pathway that mediates both downstream BR responses and negative feedback regulation of BR biosynthesis. There is evidence for phosphorylation-dependent nucleocytoplasmic shuttling of BZR1. GSK3-like kinases (including BIN2), 14-3-3 proteins, and the phosphatase BSU1 seem to participate in this process. Phosphorylation also appears to affect BZR1's transcriptional activities.","protein_coding","BRASSINAZOLE-RESISTANT 1 (BZR1)","BRASSINAZOLE-RESISTANT 1 (BZR1)"]
["AT1G75390","AT1G75390.1","basic leucine-zipper 44;(source:Araport11)","protein_coding","BASIC LEUCINE-ZIPPER 44 (bZIP44)","BASIC LEUCINE-ZIPPER 44 (AtbZIP44);BASIC LEUCINE-ZIPPER 44 (bZIP44)"]
["AT1G75490","AT1G75490.1","encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.","protein_coding"]
["AT1G76890","AT1G76890.2","encodes a plant trihelix DNA-binding protein","protein_coding","(GT2)","(GT2); (AT-GT2)"]
["AT1G77080","AT1G77080.8","MADS domain protein - flowering regulator that is closely related to FLC. Deletion of this locus in Nd ecotype is correlated with earlier flowering in short days suggesting function as a negative regulator of flowering.","protein_coding"]
["AT1G78080","AT1G78080.1","Encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family (RAP2.4). The protein contains one AP2 domain. Role in mediating light and ethylene signaling. The mRNA is cell-to-cell mobile.","protein_coding","RELATED TO AP2 4 (RAP2.4)","(ATWIND1);WOUND INDUCED DEDIFFERENTIATION 1 (WIND1);RELATED TO AP2 4 (RAP2.4); (ERF59)"]
["AT1G78700","AT1G78700.1","BES1/BZR1 homolog 4;(source:Araport11)","protein_coding","BES1/BZR1 HOMOLOG 4 (BEH4)","BES1/BZR1 HOMOLOG 4 (BEH4)"]
["AT1G79430","AT1G79430.2","Encodes gene product that is required for several aspects of phloem development in the root: (1) the specific divisions organizing the phloem pole, (2) sieve element differentiation and (3) the expression of a companion-specific gene. Mutant has a defect in the organization of phloem poles in the root. apl seedlings have a short, determinate root with only occasional lateral branches.","protein_coding","ALTERED PHLOEM DEVELOPMENT (APL)","WOODY (WDY);ALTERED PHLOEM DEVELOPMENT (APL)"]
["AT2G01060","AT2G01060.1","myb-like HTH transcriptional regulator family protein;(source:Araport11)","protein_coding"]
["AT2G01760","AT2G01760.2","member of Response Regulator: B- Type","protein_coding"]
["AT2G01930","AT2G01930.1","BASIC PENTACYSTEINE1 (BPC1) is a regulator of the homeotic Arabidopsis thaliana gene SEEDSTICK (STK), which controls ovule identity. BPC1 induces conformational changes by cooperative binding to purine-rich elements present in the STK regulatory sequence. STK is upregulated in bpc1 mutant.Along with BPC2, BPC1 binds to the promoter of and represses GALS1 thereby reducing beta 1,4- galactan accumulation.","protein_coding","BASIC PENTACYSTEINE1 (BPC1)","BASIC PENTACYSTEINE1 (BPC1); (BBR);BASIC PENTACYSTEINE1 (ATBPC1)"]
["AT2G01940","AT2G01940.3","Encodes a transcription factor that, together with IDD14 and IDD16, regulates auxin biosynthesis and transport and thus aerial organ morphogenesis and gravitropic responses. May be involved in an early event in shoot gravitropism such as gravity perception and/or a signaling process subsequent to amyloplast sedimentation as a putative transcription factor in gravity-perceptive cells.","protein_coding","SHOOT GRAVITROPISM 5 (SGR5)","SHOOT GRAVITROPISM 5 (SGR5);ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 15 (ATIDD15);INDETERMINATE(ID)-DOMAIN 15 (IDD15)"]
["AT2G02070","AT2G02070.1","RAVEN is part of the network regulated by BLJUEJAY, JACKDAW, SACRECROW and SHORT-ROOT to regulate root tissue patterning through cell lineage specification and asymmetric cell division. RAVEN is directly activated by SHORT-ROOT and directly repressed by JACKDAW.","protein_coding","INDETERMINATE(ID)-DOMAIN 5 (IDD5)","RAVEN (RVN);INDETERMINATE(ID)-DOMAIN 5 (AtIDD5);INDETERMINATE(ID)-DOMAIN 5 (IDD5)"]
["AT2G02080","AT2G02080.1","C2H2 BIRD transcription factor family.","protein_coding","INDETERMINATE(ID)-DOMAIN 4 (IDD4)","INDETERMINATE(ID)-DOMAIN 4 (AtIDD4);INDETERMINATE(ID)-DOMAIN 4 (IDD4);IMPERIAL EAGLE (IME)"]
["AT2G03340","AT2G03340.1","Encodes WRKY DNA-binding protein 3 (WRKY3).","protein_coding","WRKY DNA-BINDING PROTEIN 3 (WRKY3)","WRKY DNA-BINDING PROTEIN 3 (WRKY3)"]
["AT2G06200","AT2G06200.2","Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower","protein_coding"]
["AT2G16720","AT2G16720.1","Encodes a member of MYB3R- and R2R3- type MYB- encoding gene family that acts as a repressor of flavonol biosynthesis. AtMYB7 gene expression is induced by salt treatment.","protein_coding","MYB DOMAIN PROTEIN 7 (MYB7)","MYB DOMAIN PROTEIN 7 (MYB7);ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 7 (ATMYB7); (ATY49)"]
["AT2G17410","AT2G17410.1","AT Rich domain protein.","protein_coding","AT RICH INTERACTION DOMAIN 2 (ARID2)","AT RICH INTERACTION DOMAIN 2 (ARID2)"]
["AT2G18160","AT2G18160.1","Encodes a b-ZIP transcription factor.","protein_coding","BASIC LEUCINE-ZIPPER 2 (bZIP2)","BASIC LEUCINE-ZIPPER 2 (ATBZIP2);G-BOX BINDING FACTOR 5 (GBF5);BASIC LEUCINE-ZIPPER 2 (bZIP2);FLORAL TRANSITION AT THE MERISTEM3 (FTM3)"]
["AT2G20180","AT2G20180.2","Encodes a novel Myc-related bHLH transcription factor that has transcriptional activation activity in the dark. It is a key negative regulator of phytochrome-mediated seed germination and acts by inhibiting chlorophyll biosynthesis, light-mediated suppression of hypocotyl elongation and far-red light-mediated suppression of seed germination, and promoting negative gravitropism in hypocotyls. Light reduces this activity in a phy-dependent manner. The protein preferentially interacts with the Pfr forms of Phytochrome A (PhyA) and Phytochrome B (PhyB), is physically associated with APRR1/TOC1 and is degraded in red (R) and far-red (FR) light through the ubiquitin (ub)-26S proteasome pathway to optimize photomorphogenic development in Arabidopsis. It also negatively regulates GA3 oxidase expression.","protein_coding","PHYTOCHROME INTERACTING FACTOR 3-LIKE 5 (PIL5)","PHYTOCHROME INTERACTING FACTOR 3-LIKE 5 (PIL5)"]
["AT2G20570","AT2G20570.2","Encodes GLK1, Golden2-like 1, one of a pair of partially redundant nuclear transcription factors that regulate chloroplast development in a cell-autonomous manner. GLK2, Golden2-like 2, is encoded by At5g44190. GLK1 and GLK2 regulate the expression of the photosynthetic apparatus. GLK1 is also a member of the GARP transcription factor family. Promotes anthocyanin biosynthesis via an MBW complex-dependent pathway.","protein_coding","GBF'S PRO-RICH REGION-INTERACTING FACTOR 1 (GPRI1)","GBF'S PRO-RICH REGION-INTERACTING FACTOR 1 (GPRI1)"]
["AT2G22300","AT2G22300.1","Encodes a putative CAM binding transcription factor. Loss of function mutations show enhanced resistance to fungal and bacterial pathogens suggesting that CAMTA functions to suppress defense responses.It acts in the cold response pathway, it can bind to and activate the expression of DREB1 genes.","protein_coding","SIGNAL RESPONSIVE 1 (SR1)","SIGNAL RESPONSIVE 1 (SR1);CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 3 (CAMTA3)"]
["AT2G22430","AT2G22430.1","Encodes a homeodomain leucine zipper class I (HD-Zip I) protein that is a target of the protein phosphatase ABI1 and regulates hormone responses in Arabidopsis.","protein_coding","HOMEOBOX PROTEIN 6 (HB6)","HOMEOBOX PROTEIN 6 (ATHB6);HOMEOBOX PROTEIN 6 (HB6)"]
["AT2G22800","AT2G22800.1","Encodes homeobox protein HAT9.","protein_coding","(HAT9)","(HAT9)"]
["AT2G23340","AT2G23340.1","encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.","protein_coding","DREB AND EAR MOTIF PROTEIN 3 (DEAR3)","DREB AND EAR MOTIF PROTEIN 3 (DEAR3)"]
["AT2G24260","AT2G24260.1","Encodes a basic helix-loop-helix (bHLH) protein that regulates root hair and sperm cell development. One of the three Arabidopsis homologs of the Lotus japonicus ROOTHAIRLESS1 (LjRHL1) gene: At2g24260 (AtLRL1), At4g30980 (AtLRL2), and At5g58010 (AtLRL3).","protein_coding","LJRHL1-LIKE 1 (LRL1)","LJRHL1-LIKE 1 (LRL1);DEFECTIVE REGION OF POLLEN 1 (DROP1)"]
["AT2G27300","AT2G27300.1","NTL8 is a membrane-associated NAC transcription factor that binds both TRY and TCL1. Overexpression results in fewer trichomes.","protein_coding","NTM1-LIKE 8 (NTL8)","ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 40 (ANAC040);NTM1-LIKE 8 (NTL8)"]
["AT2G28810","AT2G28810.1","Dof-type zinc finger DNA-binding family protein;(source:Araport11)","protein_coding"]
["AT2G31370","AT2G31370.1","Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11)","protein_coding","POSF21 (POSF21)","POSF21 (POSF21); (BZIP59); (ATBZIP59)"]
["AT2G32460","AT2G32460.1","Member of the R2R3 factor gene family.","protein_coding","MYB DOMAIN PROTEIN 101 (MYB101)","ARABIDOPSIS THALIANA MYB 1 (ATM1);ABNORMAL SHOOT 7 (ABS7); (ATMYB101);MYB DOMAIN PROTEIN 101 (MYB101);ABC TRANSPORTER OF THE MITOCHONDRION 1 (ATM1)"]
["AT2G35530","AT2G35530.1","Encodes a G group bZIP transcription factor family member that can bind cis elements with an ACGT core, such as G-box, Hex, C-box and As-1. The protein is localized in the nucleus and can homodimerize and can heterodimerize with other G group members.","protein_coding","BASIC REGION/LEUCINE ZIPPER TRANSCRIPTION FACTOR 16 (bZIP16)","BASIC REGION/LEUCINE ZIPPER TRANSCRIPTION FACTOR 16 (bZIP16); (AtbZIP16)"]
["AT2G36270","AT2G36270.3","Encodes a member of the basic leucine zipper transcription factor family, involved in ABA signalling during seed maturation and germination. The Arabidopsis abscisic acid (ABA)-insensitive abi5 mutants have pleiotropic defects in ABA response, including decreased sensitivity to ABA inhibition of germination and altered expression of some ABA-regulated genes. Comparison of seed and ABA-inducible vegetative gene expression in wild-type and abi5-1 plants indicates that ABI5 regulates a subset of late embryogenesis-abundant genes during both developmental stages. Responsible for reducing cadmium uptake, mediated by interaction with MYB49 .","protein_coding","ABA INSENSITIVE 5 (ABI5)","ABA INSENSITIVE 5 (ABI5)"]
["AT2G38340","AT2G38340.1","encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.","protein_coding","DEHYDRATION RESPONSE ELEMENT-BINDING PROTEIN 19 (DREB19)","DEHYDRATION RESPONSE ELEMENT-BINDING PROTEIN 19 (DREB19)"]
["AT2G38530","AT2G38530.1","Involved in lipid transfer between membranes and plays a role in maintaining the integrity of the cuticle-cell wall interface. Belongs to a family of Lipid transfer proteins. Sequence similarity to other plant/Arabidopsis LPT genes but highest similarity to LPT1. Stress and pathogen-inducible motifs found in the upstream region. Expressed in flower, leaves and siliques but absent in roots. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.","protein_coding","LIPID TRANSFER PROTEIN 2 (LTP2)","(LP2);CELL GROWTH DEFECT FACTOR-3 (cdf3);LIPID TRANSFER PROTEIN 2 (LTP2); (ATLTPI-5)"]
["AT2G40260","AT2G40260.1","Transcription factor involved in wax biosynthesis; together with MYS1 acts upstream of the DEWAX-SPL9 module, thus regulating CER1 expression; regulates the diurnal expression pattern of DEWAX.","protein_coding","MYB-SHAQKYF 1 (MYS2)","MYB-SHAQKYF 1 (MYS2)"]
["AT2G40340","AT2G40340.6","Encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.","protein_coding"]
["AT2G40620","AT2G40620.1","Basic leucine zipper transcription factor. Localizes from cytoplasm to the nucleus under heat stress.","protein_coding","BASIC LEUCINE-ZIPPER 18 (BZIP18)","BASIC LEUCINE-ZIPPER 18 (BZIP18)"]
["AT2G40950","AT2G40950.1","bZIP17 appears to regulate transcription as part of a salt and osmotic stress response. zip17 mutants show enhanced inhibition of primary root elongation in response to NaCl. Several salt-responsive genes, such as ATHB-7 show a reduced transcriptional response to a salt treatment in zip17 mutant seedlings. myc:bZIP17 undergoes proteolytic processing in salt-treated wild type seedlings, but not in s1p-3 (subtilase) mutants and there is also evidence for S1P-mediated cleavage of bZIP17 in vitro. In addition, an mGFP:bZIP17 protein moves from the ER to the nucleus following salt treatment. It is cleaved by S2P to allow translocation to the nucleus.","protein_coding","(BZIP17)","(BZIP17)"]
["AT2G41070","AT2G41070.4","Transcription factor homologous to ABI5. Regulates AtEm1 expression by binding directly at the AtEm1 promoter. Located in the nucleus and expressed during seed maturation in the cotyledons and later in the whole embryo.","protein_coding"]
["AT2G41940","AT2G41940.1","Encodes a zinc finger protein containing only a single zinc finger. Together with GIS and GIS2 plays partially redundant and essential role in inflorescence trichome initiation and in its regulation by GA and cytokinins.","protein_coding","ZINC FINGER PROTEIN 8 (ZFP8)","ZINC FINGER PROTEIN 8 (ZFP8);ZINC FINGER PROTEIN8 (ZFP8)"]
["AT2G42280","AT2G42280.3","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)","protein_coding"]
["AT2G43010","AT2G43010.5","Isolated as a semidominant mutation defective in red -light responses. Encodes a nuclear localized bHLH protein that interacts with active PhyB protein. Negatively regulates phyB mediated red light responses. Involved in shade avoidance response. Protein abundance is negatively regulated by PhyB.Involved in the regulation of response to nutrient levels. Controls the resistance to B. cinerea in a COI1- and EIN2-dependent manner.","protein_coding"]
["AT2G44910","AT2G44910.1","Encodes a homeodomain protein whose expression displays a dependence on phyB for both red and far-red light response. Also involved in the shade avoidance syndrome.","protein_coding","HOMEOBOX-LEUCINE ZIPPER PROTEIN 4 (HB4)","HOMEOBOX-LEUCINE ZIPPER PROTEIN 4 (ATHB4);ARABIDOPSIS THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 4 (ATHB-4);HOMEOBOX-LEUCINE ZIPPER PROTEIN 4 (HB4)"]
["AT2G45050","AT2G45050.1","Encodes a member of the GATA factor family of zinc finger transcription factors. A positive regulator of photomorphogenesis.","protein_coding","GATA TRANSCRIPTION FACTOR 2 (GATA2)","GATA TRANSCRIPTION FACTOR 2 (GATA2)"]
["AT2G45480","AT2G45480.3","Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development.","protein_coding"]
["AT2G46270","AT2G46270.1","encodes a bZIP G-box binding protein whose expression is induced by ABA. It has been shown to bind to Adh that contains the G-box and is induced by cold and water deprivation. GBF3 has been shown to be expressed mostly in the root and dark-grown leaves. GBF3 can act as homodimers and as heterodimers with GFB1, GBF2 and GBF4. In addition, GBF3!?s DNA binding activity is enhanced by GIP1, GPRI1 and GPRI2.","protein_coding","G-BOX BINDING FACTOR 3 (GBF3)","G-BOX BINDING FACTOR 3 (GBF3)"]
["AT2G46310","AT2G46310.1","CRF5 encodes one of the six cytokinin response factors. It is transcriptionally upregulated in response to cytokinin. CRF5 belongs to the AP2/ERF superfamily of the transcriptional factors. CRF proteins rapidly relocalize to the nucleus in response to cytokinin. Analysis of loos-of-function mutants revealed that the CRFs function redundantly to regulate the development of embryos, cotyledons and leaves.","protein_coding","CYTOKININ RESPONSE FACTOR 5 (CRF5)","CYTOKININ RESPONSE FACTOR 5 (CRF5)"]
["AT2G46590","AT2G46590.2","Encodes a protein containing Dof zinc finger motifs that is a positive regulator of light-mediated seed germination. Its expression is limited to vascular system of the mother plant. A recessive mutation is inherited as maternal-effect and expression is not detected in the embryo. Mutants are defective in seed germination and are more dependent on light and cold treatment and less sensitive to gibberellin during seed germination. It plays its main role downstream of PIL5 and DAG1 in the phytochrome B (phyB)-mediated pathway.","protein_coding","DOF AFFECTING GERMINATION 2 (DAG2)","DOF AFFECTING GERMINATION 2 (DAG2)"]
["AT2G46830","AT2G46830.1","Encodes a transcriptional repressor that performs overlapping functions with LHY in a regulatory feedback loop that is closely associated with the circadian oscillator of Arabidopsis. Binds to the evening element in the promoter of TOC1 and represses TOC1 transcription. CCA1 and LHY colocalize in the nucleus and form heterodimers in vivo. CCA1 and LHY function synergistically in regulating circadian rhythms of Arabidopsis. CCA1 binds the GI promoter.","protein_coding","CIRCADIAN CLOCK ASSOCIATED 1 (CCA1)","(AtCCA1);CIRCADIAN CLOCK ASSOCIATED 1 (CCA1)"]
["AT3G01470","AT3G01470.1","Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf and hypocotyl development. Its promoter is bound by PIF1 which likely regulates its expression. Its translation is regulated by a conserved upstream ORF (CPuORF33).","protein_coding","HOMEOBOX 1 (HB-1)","HOMEOBOX 1 (ATHB-1);ARABIDOPSIS THALIANA HOMEOBOX 1 (ATHB1); (HD-ZIP-1);HOMEODOMAIN PROTEIN FROM ARABIDOIPSIS THALIANA 5 (HAT5);HOMEOBOX 1 (HB-1)"]
["AT3G02150","AT3G02150.2","a chloroplast trans-acting factor of the psbD light-responsive promoter.TCP gene involved in heterochronic control of leaf differentiation.","protein_coding","PLASTID TRANSCRIPTION FACTOR 1 (PTF1)","PLASTID TRANSCRIPTION FACTOR 1 (PTF1); (TFPD); (A-PTF-1); (BHLHB1)"]
["AT3G02940","AT3G02940.1","Encodes a putative transcription factor (MYB107).","protein_coding","MYB DOMAIN PROTEIN 107 (MYB107)","MYB DOMAIN PROTEIN 107 (MYB107);MYB DOMAIN PROTEIN 107 (AtMYB107)"]
["AT3G04450","AT3G04450.1","Homeodomain-like superfamily protein;(source:Araport11)","protein_coding"]
["AT3G04850","AT3G04850.1","Member of the DREAM complex, LIN54 type.","protein_coding","(TCX4)","(TCX4)"]
["AT3G06740","AT3G06740.1","Encodes a member of the GATA factor family of zinc finger transcription factors.","protein_coding","GATA TRANSCRIPTION FACTOR 15 (GATA15)","GATA TRANSCRIPTION FACTOR 15 (GATA15)"]
["AT3G09600","AT3G09600.1","Encodes a MYB-like transcription factor similar to CIRCADIAN CLOCK-ASSOCIATED1 (CCA1) and ELONGATED HYPOCOTYL (LHY). Involved in the regulation of circadian clock by modulating the pattern of histone 3 (H3) acetylation. Functions as a transcriptional activator of evening element containing clock genes. Involved in heat shock response.","protein_coding","REVEILLE 8 (RVE8)","REVEILLE 8 (RVE8);LHY-CCA1-LIKE5 (LCL5)"]
["AT3G10030","AT3G10030.1","aspartate/glutamate/uridylate kinase family protein;(source:Araport11)","protein_coding"]
["AT3G10760","AT3G10760.1","Homeodomain-like superfamily protein;(source:Araport11)","protein_coding"]
["AT3G10800","AT3G10800.1","Encodes bZIP28, a putative membrane-tethered transcriptional factor. Up-regulated in response to heat; a bZIP28 null mutant has a heat-sensitive phenotype. bZIP28 has a similar domain structure to the mammalian ATF6 protein involved in the unfolded protein response (UPR), and shares a bZIP domain, transmembrane domain, and a canonical S1P cleavage site. The bZIP28 seems to be glycosylated in vivo. bZIP28 does not appear to be transcriptionally up-regulated by UPR-inducing tunicamycin (TM) treatment. But, the expression level of three UPR-related genes is reduced in TM-treated zip28 mutants relative to wild type seedlings. And several UPR genes are transcriptionally upregulated when an N-terminal portion of the bZIP28 protein is expressed using the 35S promoter. A myc:bZIP28 fusion protein appears to be cleaved, likely at a canonical S2 cleavage site, following a TM treatment or a DTT stress-inducing treatment, but not a salt treatment. A portion of the mGFP:bZIP28 protein present in root cells appears to translocate from the cytoplasm and ER to the nucleus following TM treatment. It is cleaved by S2P to allow translocation to the nucleus. The mRNA is cell-to-cell mobile.","protein_coding","(BZIP28)","(BZIP28)"]
["AT3G12250","AT3G12250.4","basic leucine zipper transcription factor involved in the activation of SA-responsive genes.","protein_coding","TGACG MOTIF-BINDING FACTOR 6 (TGA6)","TGACG MOTIF-BINDING FACTOR 6 (TGA6); (BZIP45)"]
["AT3G12720","AT3G12720.1","Member of the R2R3 factor gene family.","protein_coding","MYB DOMAIN PROTEIN 67 (MYB67)","(ATY53);MYB DOMAIN PROTEIN 67 (ATMYB67); (MYB67);MYB DOMAIN PROTEIN 67 (MYB67)"]
["AT3G12730","AT3G12730.1","Homeodomain-like superfamily protein;(source:Araport11)","protein_coding"]
["AT3G12820","AT3G12820.1","Member of the R2R3 factor gene family.","protein_coding","MYB DOMAIN PROTEIN 10 (MYB10)","MYB DOMAIN PROTEIN 10 (AtMYB10);MYB DOMAIN PROTEIN 10 (MYB10)"]
["AT3G13040","AT3G13040.1","myb-like HTH transcriptional regulator family protein;(source:Araport11)","protein_coding","(GAMMAMYB2)","(GAMMAMYB2)"]
["AT3G13810","AT3G13810.2","indeterminate(ID)-domain 11;(source:Araport11)","protein_coding","INDETERMINATE(ID)-DOMAIN 11 (IDD11)","INDETERMINATE(ID)-DOMAIN 11 (IDD11)"]
["AT3G14180","AT3G14180.1","sequence-specific DNA binding transcription factor;(source:Araport11)","protein_coding","ARABIDOPSIS 6B-INTERACTING PROTEIN 1-LIKE 2 (ASIL2)","ARABIDOPSIS 6B-INTERACTING PROTEIN 1-LIKE 2 (ASIL2)"]
["AT3G14230","AT3G14230.1","encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.2). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.","protein_coding","RELATED TO AP2 2 (RAP2.2)","RELATED TO AP2 2 (RAP2.2)"]
["AT3G15030","AT3G15030.1","Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation. Promotes hypocotyl elongation when hyperactivated. Enhance hypocotyl cell elongation by directly activating YUC5.","protein_coding","TCP FAMILY TRANSCRIPTION FACTOR 4 (TCP4)","TCP FAMILY TRANSCRIPTION FACTOR 4 (TCP4);MATERNAL EFFECT EMBRYO ARREST 35 (MEE35); (PCF4)"]
["AT3G15210","AT3G15210.1","Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-4). The protein contains one AP2 domain. Acts as a negative regulator of JA-responsive defense gene expression and resistance to the necrotrophic fungal pathogen Fusarium oxysporum and antagonizes JA inhibition of root elongation. The mRNA is cell-to-cell mobile.","protein_coding","ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4 (ERF4)","ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4 (ATERF-4);ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4 (ERF4);RELATED TO AP2 5 (RAP2.5);ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 4 (ATERF4)"]
["AT3G15500","AT3G15500.1","Encodes an ATAF-like NAC-domain transcription factor that doesn't contain C-terminal sequences shared by CUC1, CUC2 and NAM. Note: this protein (AtNAC3) is not to be confused with the protein encoded by locus AT3G29035, which, on occasion, has also been referred to as AtNAC3. The mRNA is cell-to-cell mobile.","protein_coding","NAC DOMAIN CONTAINING PROTEIN 3 (NAC3)","NAC DOMAIN CONTAINING PROTEIN 3 (ATNAC3);NAC DOMAIN CONTAINING PROTEIN 55 (ANAC055);NAC DOMAIN CONTAINING PROTEIN 55 (NAC055);NAC DOMAIN CONTAINING PROTEIN 3 (NAC3); (ANAC55)"]
["AT3G16770","AT3G16770.1","Encodes a member of the ERF (ethylene response factor) subfamily B-2 of the plant specific ERF/AP2 transcription factor family (RAP2.3). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.It is localized to the nucleus and acts as a transcriptional activator through the GCC-box. It has been identified as a suppressor of Bax-induced cell death by functional screening in yeast and can also suppress Bax-induced cell death in tobacco plants. Overexpression of this gene in tobacco BY-2 cells confers resistance to H2O2 and heat stresses. Overexpression in Arabidopsis causes upregulation of PDF1.2 and GST6. It is part of the ethylene signaling pathway and is predicted to act downstream of EIN2 and CTR1, but not under EIN3. The mRNA is cell-to-cell mobile.","protein_coding","ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN (EBP)","RELATED TO AP2 3 (RAP2.3);ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN (ATEBP);ETHYLENE RESPONSE FACTOR 72 (ERF72);ETHYLENE-RESPONSIVE ELEMENT BINDING PROTEIN (EBP)"]
["AT3G16857","AT3G16857.2","Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Also involved in cytokinin-dependent inhibition of hypocotyl elongation and cytokinin-dependent greening and shooting in tissue culture. ARR1, ARR10, and ARR12 are redundant regulators of drought response, with ARR1 being the most critical. ARR1, ARR10 and ARR12 redundantly bind to the promoter of WUSCHEL (WUS), directly activate its transcription. In parallel, ARR1, ARR10 and ARR12 repress the expression of YUCCAs (YUCs), which encode a key enzyme for auxin biosynthesis, indirectly promoting WUS induction. The regulation of ARR1, ARR10 and ARR12 on WUS and YUCs is required for regeneration and maintenance of shoot meristem.","protein_coding","RESPONSE REGULATOR 1 (RR1)","RESPONSE REGULATOR 1 (ARR1);RESPONSE REGULATOR 1 (RR1)"]
["AT3G16870","AT3G16870.1","Encodes a member of the GATA factor family of zinc finger transcription factors.","protein_coding","GATA TRANSCRIPTION FACTOR 17 (GATA17)","GATA TRANSCRIPTION FACTOR 17 (GATA17)"]
["AT3G17609","AT3G17609.2","Encodes a homolog of HY5 (HYH). Involved in phyB signaling pathway.","protein_coding","HY5-HOMOLOG (HYH)","HY5-HOMOLOG (HYH)"]
["AT3G19290","AT3G19290.3","bZIP transcription factor with specificity for abscisic acid-responsive elements (ABRE). Mediates ABA-dependent stress responses.ABF4 acts through SnRK2 pathway and binds to ABA response elements of the promoters of NYE1 and regulates their expression to promote chlorophyll degradation.","protein_coding","ABRE BINDING FACTOR 4 (ABF4)","ABRE BINDING FACTOR 4 (ABF4); (ATAREB2)"]
["AT3G20310","AT3G20310.1","Encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-7). The protein contains one AP2 domain. Phosphorylated by PKS3 in vitro. Involved in ABA-mediated responses. Acts as a repressor of GCC box?mediated transcription together with AtSin3 and HDA19.","protein_coding","ETHYLENE RESPONSE FACTOR 7 (ERF7)","(ATERF-7); (ATERF7);ETHYLENE RESPONSE FACTOR 7 (ERF7)"]
["AT3G20770","AT3G20770.1","Encodes EIN3 (ethylene-insensitive3), a nuclear transcription factor that initiates downstream transcriptional cascades for ethylene responses. EIN3 interacts with MYC2, MYC3 and MYC4 to inhibit jasmonate-induced expression of wound-responsive genes and herbivory-inducible genes, and plant defense against generalist herbivores.","protein_coding","ETHYLENE-INSENSITIVE3 (EIN3)","ETHYLENE-INSENSITIVE3 (EIN3); (AtEIN3)"]
["AT3G21270","AT3G21270.1","Encodes Dof zinc finger protein adof2.","protein_coding","DOF ZINC FINGER PROTEIN 2 (DOF2)","DOF ZINC FINGER PROTEIN 2 (ADOF2);DOF ZINC FINGER PROTEIN 2 (DOF2)"]
["AT3G22170","AT3G22170.1","A component of the PHYA signaling network, mediates the FR-HIR response to far-red light in concert with FAR1. Expression is induced by age; involved in negative regulation of leaf senescence.","protein_coding","FAR-RED ELONGATED HYPOCOTYLS 3 (fhy3)","FAR-RED ELONGATED HYPOCOTYLS 3 (fhy3);CHLOROPLAST DIVISION MUTANT 45 (CPD45)"]
["AT3G22480","AT3G22480.1","&#946;-type PFD member that modulates actin and tubulin patterning in roots; interacts with prefoldinRPB5 interactor (URI) to recycle PIN2 and modulate auxin distribution.","protein_coding","PREFOLDIN 2 (PFD2)","PREFOLDIN 2 (PFD2)"]
["AT3G23210","AT3G23210.1","bHLH34 is a basic helix loop helix transcription factor. It can bind GAGA and E-box cis elements.It is induced by abiotic stressors including ABA, salt and glucose. PGR, a plasma membrane glucose responsive regulator is a target of bHLH34. Involved in Fe regulation.","protein_coding","BASIC HELIX-LOOP-HELIX 34 (bHLH34)","BASIC HELIX-LOOP-HELIX 34 (bHLH34);IRON DEFICIENCY TOLERANT1 (IDT1)"]
["AT3G23240","AT3G23240.1","encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ERF1). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. EREBP like protein that binds GCC box of ethylene regulated promoters such as basic chitinases. Constitutive expression of ERF1 phenocopies ethylene over production. Involved in ethylene signaling cascade,downstream of EIN2 and EIN3.","protein_coding","ETHYLENE RESPONSE FACTOR 1 (ERF1)","ETHYLENE RESPONSE FACTOR 1 (ERF1);ETHYLENE RESPONSE FACTOR 1 (ATERF1); (ERF1B); (ATERF#092)"]
["AT3G23690","AT3G23690.1","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)","protein_coding","CIB1 LIKE PROTEIN 2 (CIL2)","CIB1 LIKE PROTEIN 2 (CIL2)"]
["AT3G24050","AT3G24050.1","Encodes a member of the GATA factor family of zinc finger transcription factors.","protein_coding","GATA TRANSCRIPTION FACTOR 1 (GATA1)","GATA TRANSCRIPTION FACTOR 1 (GATA1)"]
["AT3G24120","AT3G24120.2","MYB-CC protein involved in regulation of response to phosphate starvation.","protein_coding","PHR1-LIKE 2 (PHL2)","PHR1-LIKE 2 (PHL2)"]
["AT3G24520","AT3G24520.1","member of Heat Stress Transcription Factor (Hsf) family","protein_coding","HEAT SHOCK TRANSCRIPTION FACTOR C1 (HSFC1)","(AT-HSFC1);HEAT SHOCK TRANSCRIPTION FACTOR C1 (HSFC1)"]
["AT3G27010","AT3G27010.1","Belongs to a TCP protein transcription factor family. Members of this family contain a predicted basic-helix-loop-helix domain involved in DNA binding. Related to rice PCF1 and PCF2 genes. Binds to the GCCCR element of CYCB1;1. Involved in regulation of expression of cell cycle control and ribosomal protein genes. Inhibits pavement cell size without affecting leaf size.","protein_coding","TEOSINTE BRANCHED 1, CYCLOIDEA, PCF (TCP)-DOMAIN FAMILY PROTEIN 20 (TCP20)","(PCF1);TEOSINTE BRANCHED 1, CYCLOIDEA, PCF (TCP)-DOMAIN FAMILY PROTEIN 20 (TCP20); (ATTCP20);ARABIDOPSIS THALIANA TEOSINTE BRANCHED 1, CYCLOIDEA, PCF (TCP)-DOMAIN FAMILY PROTEIN 20 (AT-TCP20)"]
["AT3G28910","AT3G28910.1","Encodes a MYB family transcriptional regulator.It is a a positive regulator of the pathogen-induced hypersensitive response and of brassinosteroid and abscisic acid signaling and a negative regulator of photomorphogenesis. Accumulation of MYB30 is light regulated and activity is modulated by SUMOlaytion. MYB30 can for complexes with different bHLH components to regulate expression of different pathways.","protein_coding","MYB DOMAIN PROTEIN 30 (MYB30)","MYB DOMAIN PROTEIN 30 (MYB30); (ATMYB30)"]
["AT3G28920","AT3G28920.1","homeobox protein 34;(source:Araport11)","protein_coding","HOMEOBOX PROTEIN 34 (HB34)","HOMEOBOX PROTEIN 34 (AtHB34);HOMEOBOX PROTEIN 34 (HB34);ZINC FINGER HOMEODOMAIN 9 (ZHD9)"]
["AT3G44460","AT3G44460.1","basic leucine zipper transcription factor (BZIP67), identical to basic leucine zipper transcription factor GI:18656053 from (Arabidopsis thaliana); identical to cDNA basic leucine zipper transcription factor (atbzip67 gene) GI:18656052. Located in the nucleus and expressed during seed maturation in the cotyledons.","protein_coding","(DPBF2)","(DPBF2);BASIC LEUCINE ZIPPER TRANSCRIPTION FACTOR 67 (AtbZIP67)"]
["AT3G44480","AT3G44480.3","Encodes a TIR-NB-LRR R-protein RPP1 that confers resistance to Peronospora parasitica (downy mildew).","protein_coding"]
["AT3G45170","AT3G45170.1","Encodes a member of the GATA factor family of zinc finger transcription factors.","protein_coding","GATA TRANSCRIPTION FACTOR 14 (GATA14)","GATA TRANSCRIPTION FACTOR 14 (GATA14)"]
["AT3G45610","AT3G45610.1","PEAR protein involved in the formation of a short-range concentration gradient that peaks at protophloem sieve elements, and activates gene expression that promotes radial growth. Locally promotes transcription of inhibitory HD-ZIP III genes, and thereby establishes a negative-feedback loop that forms a robust boundary that demarks the zone of cell division.","protein_coding","DOF TRANSCRIPTION FACTOR 6 (DOF6)","DOF TRANSCRIPTION FACTOR 6 (DOF6)"]
["AT3G46640","AT3G46640.3","Encodes a myb family transcription factor with a single Myb DNA-binding domain (type SHAQKYF) that is unique to plants and is essential for circadian rhythms, specifically for transcriptional regulation within the circadian clock. LUX is required for normal rhythmic expression of multiple clock outputs in both constant light and darkness. It is coregulated with TOC1 and seems to be repressed by CCA1 and LHY by direct binding of these proteins to the evening element in the LUX promoter. The mRNA is cell-to-cell mobile.","protein_coding","PHYTOCLOCK 1 (PCL1)","PHYTOCLOCK 1 (PCL1)"]
["AT3G47500","AT3G47500.1","Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.","protein_coding","CYCLING DOF FACTOR 3 (CDF3)","CYCLING DOF FACTOR 3 (CDF3)"]
["AT3G47600","AT3G47600.1","Encodes a putative transcription factor (MYB94).","protein_coding","MYB DOMAIN PROTEIN 94 (MYB94)","MYB DOMAIN PROTEIN 94 (MYB94); (ATMYBCP70);MYB DOMAIN PROTEIN 94 (ATMYB94)"]
["AT3G47620","AT3G47620.1","Encodes a transcription factor AtTCP14 that regulates seed germination. AtTCP14 shows elevated expression level just prior to germination. AtTCP14 is predominantly expressed in the vascular tissue of the embryo, and affects gene expression in radicles in a non-cell-autonomous manner. Modulates GA-dependent stamen filament elongation by direct activation of SAUR63 subfamily genes through conserved target sites in their promoters. Promotes together with TCP8, 7 and 15 endoreduplication-dependent cell expansion in leaf.","protein_coding","TEOSINTE BRANCHED, CYCLOIDEA AND PCF (TCP) 14 (TCP14)","TEOSINTE BRANCHED, CYCLOIDEA AND PCF (TCP) 14 (AtTCP14);TEOSINTE BRANCHED, CYCLOIDEA AND PCF (TCP) 14 (TCP14)"]
["AT3G50410","AT3G50410.1","Arabidopsis Dof protein containing a single 51-amino acid zinc finger DNA-binding domain, which may play an important roles in plant growth and development.","protein_coding","OBF BINDING PROTEIN 1 (OBP1)","DOF PROTEIN 3.4 (DOF3.4);OBF BINDING PROTEIN 1 (OBP1)"]
["AT3G50700","AT3G50700.1","zinc finger protein, similar to maize Indeterminate1 (ID1)","protein_coding","INDETERMINATE(ID)-DOMAIN 2 (IDD2)","INDETERMINATE(ID)-DOMAIN 2 (AtIDD2);INDETERMINATE(ID)-DOMAIN 2 (IDD2)"]
["AT3G51080","AT3G51080.1","Encodes a member of the GATA factor family of zinc finger transcription factors.","protein_coding","GATA TRANSCRIPTION FACTOR 6 (GATA6)","GATA TRANSCRIPTION FACTOR 6 (GATA6)"]
["AT3G54320","AT3G54320.1","WRINKLED1 encodes transcription factor of the AP2/ERWEBP class. Protein has two plant-specific (AP2/EREB) DNA-binding domains and is involved in the control of storage compound biosynthesis in Arabidopsis. Mutants have wrinkled seed phenotype, due to a defect in the incorporation of sucrose and glucose into triacylglycerols. Transgenic sGsL plants (21-day-old) grown on 6% sucrose for 24 hours had 2-fold increase in levels of expressions (sGsL line carries a single copy of T-DNA containing the Spomin::GUS-Spomin::LUC dual reporter genes in the upper arm of chromosome 5 of ecotype Col-0. The sporamin .minimal. promoter directs sugar-inducible expression of the LUC and GUS reporters in leaves). Regulation by LEC2 promotes fatty acid accumulation during seed maturation. Splice form 3 is the major form expressed in seedlings.Mutations in the C terminal intrinsically disordered region increase the stability of WRI1 and lead to increased oil production.","protein_coding","WRINKLED 1 (WRI1)","(ATWRI1);ACTIVATOR OF SPO(MIN)::LUC1 (ASML1);WRINKLED (WRI);WRINKLED 1 (WRI1)"]
["AT3G54340","AT3G54340.1","Floral homeotic gene encoding a MADS domain protein homologous to SRF transcription factors. Specifies petal and stamen identities. Associates with PISTILLATA.","protein_coding","APETALA 3 (AP3)","(ATAP3);APETALA 3 (AP3)"]
["AT3G54810","AT3G54810.1","Encodes a protein containing a GATA type zinc finger domain that is expressed in the embryo axis and involved in germination. Mutants have a reduced rate of germination even when stratified.","protein_coding","BLUE MICROPYLAR END 3 (BME3)","GATA TRANSCRIPTION FACTOR 8 (GATA8);BLUE MICROPYLAR END 3-ZINC FINGER (BME3-ZF);BLUE MICROPYLAR END 3 (BME3)"]
["AT3G55370","AT3G55370.3","Encodes a nuclear localized Dof domain containing transcription factor expressed primarily in roots. Responsive to salicylic acid. Transgenic overexpressors have yellow leaves and short, defective roots.","protein_coding","OBF-BINDING PROTEIN 3 (OBP3)","OBF-BINDING PROTEIN 3 (OBP3)"]
["AT3G56850","AT3G56850.1","Encodes an ABA-responsive element binding protein with a bZIP domain. Located in the nucleus and expressed in the embryo during seed maturation.","protein_coding","ABA-RESPONSIVE ELEMENT BINDING PROTEIN 3 (AREB3)","ABA-RESPONSIVE ELEMENT BINDING PROTEIN 3 (AREB3); (DPBF3)"]
["AT3G57230","AT3G57230.1","MADS-box transcription factor. Expressed in leaf, root and stem, with higher RNA accumulation in guard cells and trichomes. AGL16 can directly interact with SVP and indirectly interact with FLC. Furthermore, the accumulation of AGL16 transcripts is modulated by miR824 (AT4G24415). The flowering time effect for the miR824/AGL16 module is more obvious in the Col-FRI background than in the Col-0 background. AGL16 controls flowering via an allelic dosage effect in long-day non-vernalized conditions.AGL16 binds to promoters of over 2000 genes with CArG-box motifs. Forms a complex with SOC1 and regulates its expression,=.","protein_coding","AGAMOUS-LIKE 16 (AGL16)","AGAMOUS-LIKE 16 (AGL16)"]
["AT3G58630","AT3G58630.1","sequence-specific DNA binding transcription factor;(source:Araport11)","protein_coding"]
["AT3G58780","AT3G58780.4","One of two genes (SHP1 and SHP2) that are required for fruit dehiscence. The two genes control dehiscence zone differentiation and promote the lignification of adjacent cells.","protein_coding"]
["AT3G59060","AT3G59060.2","Encodes a novel Myc-related bHLH transcription factor, which physically associated with APRR1/TOC1 and is a member of PIF3 transcription factor family. Involved in shade avoidance. Functions as negative regulator of PhyB. Protein levels are modulated by phytochrome B. Controls the resistance to B. cinerea in a COI1- and EIN2-dependent manner.","protein_coding","PHYTOCHROME INTERACTING FACTOR 3-LIKE 6 (PIL6)","PHYTOCHROME INTERACTING FACTOR 3-LIKE 6 (PIL6);PHYTOCHROME-INTERACTING FACTOR 5 (PIF5); (BHLHB1); (A-PUT2)"]
["AT3G60530","AT3G60530.1","Encodes a member of the GATA factor family of zinc finger transcription factors.","protein_coding","GATA TRANSCRIPTION FACTOR 4 (GATA4)","GATA TRANSCRIPTION FACTOR 4 (GATA4)"]
["AT3G61630","AT3G61630.1","CRF6 encodes one of the six cytokinin response factors. CRF5 belongs to the AP2/ERF superfamily of the transcriptional factors. CRF proteins rapidly relocalize to the nucleus in response to cytokinin. Analysis of loos-of-function mutants revealed that the CRFs function redundantly to regulate the development of embryos, cotyledons and leaves.","protein_coding","CYTOKININ RESPONSE FACTOR 6 (CRF6)","CYTOKININ RESPONSE FACTOR 6 (CRF6)"]
["AT3G61890","AT3G61890.1","Encodes a homeodomain leucine zipper class I (HD-Zip I) protein. Loss of function mutant has abnormally shaped leaves and stems.","protein_coding","HOMEOBOX 12 (HB-12)","HOMEOBOX 12 (ATHB-12);ARABIDOPSIS THALIANA HOMEOBOX 12 (ATHB12);HOMEOBOX 12 (HB-12);HOMEOBOX 12 (HB12)"]
["AT3G62420","AT3G62420.1","Encodes a group-S bZIP transcription factor. Forms heterodimers with group-C bZIP transcription factors. The heterodimers bind to the ACTCAT cis-element of proline dehydrogenase gene.","protein_coding","BASIC REGION/LEUCINE ZIPPER MOTIF 53 (BZIP53)","BASIC REGION/LEUCINE ZIPPER MOTIF 53 (BZIP53);BASIC REGION/LEUCINE ZIPPER MOTIF 53 (ATBZIP53)"]
["AT4G00250","AT4G00250.1","STKL2 is a DUF domain containing DNA binding protein that may be involved in mediating certain glucose responses. Binds to promoter of PGR, a putative plasma membrane glucose response regulator.","protein_coding","(ATSTKL2)","(ATSTKL2)"]
["AT4G01120","AT4G01120.1","bZIP (basic leucine zipper) transcription factor that binds to the G-box regulatory element found in many plant promoters. GBF2 nuclear localization is increased by blue light","protein_coding","G-BOX BINDING FACTOR 2 (GBF2)","G-BOX BINDING FACTOR 2 (GBF2);BASIC REGION/LEUCINE ZIPPER MOTIF 5 (ATBZIP54)"]
["AT4G01280","AT4G01280.2","RVE5 is one of eleven homologous MYB-like transcription factors in Arabidopsis and a member of the RVE8 clade. Plays a minor role in clock regulation.","protein_coding","REVEILLE 5 (RVE5)","REVEILLE 5 (RVE5)"]
["AT4G02590","AT4G02590.1","Basic helix loop helix class transcriptional regulator. Shows ecotype specific effects on temperature dependent salicylic acid accumulation and immunity. Governs the competence of pericycle cells to initiate lateral root primordium formation.","protein_coding","UNFERTILIZED EMBRYO SAC 12 (UNE12)","(BHLH059);PERICYCLE FACTOR TYPE-B 1 (PFB1);UNFERTILIZED EMBRYO SAC 12 (UNE12)"]
["AT4G04890","AT4G04890.1","Encodes a homeodomain protein that is expressed in the LI layer of the vegetative, floral and inflorescence meristems. Binds to the L1 box promoter element which is required in some proteins for L1 specific expression.","protein_coding","PROTODERMAL FACTOR 2 (PDF2)","PROTODERMAL FACTOR 2 (PDF2)"]
["AT4G06746","AT4G06746.1","encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.9). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1 and RAP2.10.","protein_coding","RELATED TO AP2 9 (RAP2.9)","RELATED TO AP2 9 (RAP2.9);DREB AND EAR MOTIF PROTEIN 5 (DEAR5)"]
["AT4G08150","AT4G08150.1","A member of class I knotted1-like homeobox gene family (together with KNAT2). Similar to the knotted1 (kn1) homeobox gene of maize. Normally expressed in the peripheral and rib zone of shoot apical meristem but not in the leaf primordia. It is also expressed in the fourth floral whorl, in the region that would become style, particularly in the cell surrounding the transmitting tissue. No expression was detected in the first three floral whorls. Expression is repressed by auxin and AS1 which results in the promotion of leaf fate.","protein_coding","KNOTTED-LIKE FROM ARABIDOPSIS THALIANA (KNAT1)","KNOTTED-LIKE FROM ARABIDOPSIS THALIANA (KNAT1);BREVIPEDICELLUS (BP);BREVIPEDICELLUS 1 (BP1)"]
["AT4G09820","AT4G09820.1","TT8 is a regulation factor that acts in a concerted action with TT1, PAP1 and TTG1 on the regulation of flavonoid pathways, namely proanthocyanidin and anthocyanin biosynthesis. Affects dihydroflavonol 4-reductase gene expression. It is thought that a ternary complex composed of TT2, TT8 and TTG1 is necessary for correct expression of BAN in seed endothelium. Also important for important for marginal trichome development. It binds the promoter of both AT3G26790 and AT1G28300.TT8 interacts with JAZ proteins to regulate anthocyanin accumulation. TT8 acts maternally to affect seed FA biosynthesis and inhibits seed FA accumulation by down-regulating a group of genes either critical to embryonic development or important in the FA biosynthesis pathway. TT8 represses the activities of LEAFY COTYLEDON1, LEAFY COTYLEDON2, and FUSCA3, the critical transcriptional factors important for seed development.","protein_coding","TRANSPARENT TESTA 8 (TT8)","TRANSPARENT TESTA 8 (TT8); (BHLH42); (ATTT8)"]
["AT4G11080","AT4G11080.1","Encodes a protein containing three copies of the HMG (high mobility group)-box domain. The two Arabidopsis 3xHMG-box proteins are: AT4G11080 (3xHMG-box1) and AT4G23800 (3xHMG-box2). Interacts with mitotic and meiotic chromosomes.","protein_coding","3XHIGH MOBILITY GROUP-BOX1 (3xHMG-box1)","3XHIGH MOBILITY GROUP-BOX1 (3xHMG-box1)"]
["AT4G11140","AT4G11140.1","Encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. CRF proteins relocalize to the nucleus in response to cytokinin.","protein_coding","CYTOKININ RESPONSE FACTOR 1 (CRF1)","CYTOKININ RESPONSE FACTOR 1 (CRF1)"]
["AT4G13640","AT4G13640.2","Homeodomain-like superfamily protein;(source:Araport11)","protein_coding","UNFERTILIZED EMBRYO SAC 16 (UNE16)","PHR1-LIKE 3 (PHL3);UNFERTILIZED EMBRYO SAC 16 (UNE16)"]
["AT4G14410","AT4G14410.1","Basic helix loop helix transcription factor involved in stress mediated signaling during germination.","protein_coding","BASIC HELIX-LOOP-HELIX 104 (bHLH104)","BASIC HELIX-LOOP-HELIX 104 (bHLH104)"]
["AT4G14465","AT4G14465.1","AT-hook protein. Overexpression results in early flowering in short and long days.","protein_coding","AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 20 (AHL20)","AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 20 (AHL20)"]
["AT4G14770","AT4G14770.1","Regulates fate transition and cell Divisions in the stomatal lineage.","protein_coding","TESMIN/TSO1-LIKE CXC 2 (TCX2)","TESMIN/TSO1-LIKE CXC 2 (TCX2);TESMIN/TSO1-LIKE CXC 2 (ATTCX2); (SOL2)"]
["AT4G15090","AT4G15090.1","Encodes a nuclear localized protein involved in far red light response signaling. Loss of function mutants are defective in far red light responses. For example:prevents leaf senescence under high ratio of red/far-red light conditions.Interacts with homologous gene FHY3.","protein_coding","FAR-RED IMPAIRED RESPONSE 1 (FAR1)","FAR-RED IMPAIRED RESPONSE 1 (FAR1)"]
["AT4G16110","AT4G16110.1","Encodes a pollen-specific transcription factor involved in the expression of nuclear genes for components of mitochondrial complex I in Arabidopsis. Acts in concert with other type-B ARRs in the cytokinin signaling pathway. AHK3 mediates cytokinin-induced phosphorylation of ARR2 on the Asp-80 residue. This phosphorylation plays a positive role of ARR2 in cytokinin-mediated control of leaf longevity. Also involved in cytokinin-dependent inhibition of hypocotyl elongation.","protein_coding","RESPONSE REGULATOR 2 (RR2)","RESPONSE REGULATOR 2 (ARR2);RESPONSE REGULATOR 2 (RR2)"]
["AT4G16141","AT4G16141.1","GATA type zinc finger transcription factor family protein;(source:Araport11)","protein_coding","GATA17-LIKE (GATA17L)","GATA17-LIKE (GATA17L); (ATGATA17L)"]
["AT4G16150","AT4G16150.1","CATMA5 is a transcriptional activator. It acts in the cold response pathway, it can bind to and activate the expression of DREB1 genes.","protein_coding","CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 (CAMTA5)","CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 (CAMTA5)"]
["AT4G16780","AT4G16780.1","Encodes a homeodomain-leucine zipper protein that is rapidly and strongly induced by changes in the ratio of red to far-red light. It is also involved in cell expansion and cell proliferation and in the response to auxin. The mRNA is cell-to-cell mobile.","protein_coding","HOMEOBOX PROTEIN 2 (HB-2)","HOMEOBOX PROTEIN 2 (ATHB-2); (HAT4);ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 2 (ATHB2);HOMEOBOX PROTEIN 2 (HB-2)"]
["AT4G17490","AT4G17490.1","Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-6). The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. It is involved in the response to reactive oxygen species and light stress. Involved in regulating root architecture and the response to cold stress.","protein_coding","ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6 (ERF6)","ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6 (ATERF6); (ERF-6-6);ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6 (ERF6); (ERF103)"]
["AT4G17570","AT4G17570.2","Encodes a member of the GATA factor family of zinc finger transcription factors.","protein_coding","GATA TRANSCRIPTION FACTOR 26 (GATA26)","GATA TRANSCRIPTION FACTOR 26 (GATA26)"]
["AT4G17880","AT4G17880.1","MYC4 is bHLH transcriptional regulator. It functions as a JAZ-interacting transcription factor that acts together with MYC2 and MYC3 to activate JA-responses. It also functions in blue light mediated secondary cell wall biogenesis via regulation of NST1 expression. MYC4 directly binds to NST1 promoter and activates its expression.","protein_coding","(MYC4)","(MYC4)"]
["AT4G18020","AT4G18020.1","Encodes pseudo-response regulator 2 (APRR2) that interacts with a calcium sensor (CML9).","protein_coding","(APRR2)","PSEUDO-RESPONSE REGULATOR 2 (PRR2); (APRR2)"]
["AT4G18390","AT4G18390.1","Transcription factor which photomorphogenic growth by activating HY5 and HYH.","protein_coding","TEOSINTE BRANCHED 1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 2 (TCP2)","TEOSINTE BRANCHED 1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 2 (TCP2)"]
["AT4G18890","AT4G18890.1","BES1/BZR1 homolog 3;(source:Araport11)","protein_coding","BES1/BZR1 HOMOLOG 3 (BEH3)","BES1/BZR1 HOMOLOG 3 (BEH3)"]
["AT4G21750","AT4G21750.1","Encodes a homeobox protein similar to GL2. It is expressed in both the apical and basal daughter cells of the zygote as well as their progeny. Expression is detected starting the two-celled stage of embryo development and is later restricted to the outermost, epidermal cell layer from its inception. Its promoter is highly modular with each region contributing to specific aspects of the gene's spatial and temporal expression. Double mutant analysis with PDF2, another L1-specific gene, suggests that their functions are partially redundant and the absence of both of the genes result in abnormal shoot development.","protein_coding","MERISTEM LAYER 1 (ATML1)","MERISTEM LAYER 1 (ATML1)"]
["AT4G21895","AT4G21895.1","DNA binding protein;(source:Araport11)","protein_coding"]
["AT4G23750","AT4G23750.1","encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. Monopteros target gene. CRF proteins relocalize to the nucleus in response to cytokinin.","protein_coding","CYTOKININ RESPONSE FACTOR 2 (CRF2)","CYTOKININ RESPONSE FACTOR 2 (CRF2);TARGET OF MONOPTEROS 3 (TMO3)"]
["AT4G24240","AT4G24240.1","Encodes a Ca-dependent calmodulin binding protein. Sequence similarity to the WRKY transcription factor gene family.","protein_coding","WRKY DNA-BINDING PROTEIN 7 (WRKY7)","WRKY DNA-BINDING PROTEIN 7 (WRKY7); (ATWRKY7)"]
["AT4G24470","AT4G24470.3","ZIM is a putative transcription factor containing an atypical GATA-type zinc-finger motif.","protein_coding","ZINC-FINGER PROTEIN EXPRESSED IN INFLORESCENCE MERISTEM (ZIM)","EMBRYO-DEFECTIVE-DEVELOPMENT 1 (EDD1);ZINC-FINGER PROTEIN EXPRESSED IN INFLORESCENCE MERISTEM (ZIM); (TIFY1);GATA TRANSCRIPTION FACTOR 25 (GATA25); (ATTIFY1)"]
["AT4G26150","AT4G26150.1","Encodes a member of the GATA factor family of zinc finger transcription factors. Modulate chlorophyll biosynthesis and glutamate synthase (GLU1/Fd-GOGAT) expression.","protein_coding","CYTOKININ-RESPONSIVE GATA FACTOR 1 (CGA1)","CYTOKININ-RESPONSIVE GATA FACTOR 1 (CGA1);GATA TRANSCRIPTION FACTOR 22 (GATA22);GNC-LIKE (GNL)"]
["AT4G27900","AT4G27900.1","CCT motif family protein;(source:Araport11)","protein_coding"]
["AT4G27950","AT4G27950.1","Encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. CRF proteins relocalize to the nucleus in response to cytokinin.","protein_coding","CYTOKININ RESPONSE FACTOR 4 (CRF4)","CYTOKININ RESPONSE FACTOR 4 (CRF4)"]
["AT4G28610","AT4G28610.1","Similar to phosphate starvation response gene from Chlamydomonas. Weakly responsive to phosphate starvation. Acts upstream of PHO2 in phosphate signaling and PHT1;1 in arsenate accumulation. Its expression is responsive to both phosphate (Pi) and phosphite (Phi) in shoots.","protein_coding","PHOSPHATE STARVATION RESPONSE 1 (PHR1)","PHOSPHATE STARVATION RESPONSE 1 (PHR1); (AtPHR1)"]
["AT4G28790","AT4G28790.1","Encodes Cu-deficiency induced transcription factor 2, an uncharacterized bHLH protein, that is a target of the copper deficiency response transcriptional regulator SPL7. It is transcriptionally upregulated under copper deficiency by SPL7.","protein_coding","CU-DEFICIENCY INDUCED TRANSCRIPTION FACTOR 2 (CITF2)","CU-DEFICIENCY INDUCED TRANSCRIPTION FACTOR 2 (CITF2); (BHLH23)"]
["AT4G28811","AT4G28811.1","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)","protein_coding"]
["AT4G29940","AT4G29940.1","Homeodomain protein (PRHA). Expression of the gene differs in various vegetative and floral plant tissues and is positively influenced by the phytohormone auxin. It is often associated with regions of developing vascular tissue. The prha promoter is highly responsive to the synthetic auxin, naphthalene acetic acid, in transient assays using tobacco protoplasts. The PRHA protein has the capacity to bind to TAATTG core sequence elements but requires additional adjacent bases for high-affinity binding.","protein_coding","PATHOGENESIS RELATED HOMEODOMAIN PROTEIN A (PRHA)","PATHOGENESIS RELATED HOMEODOMAIN PROTEIN A (PRHA)"]
["AT4G31060","AT4G31060.1","encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10. A maternally expressed imprinted gene.","protein_coding"]
["AT4G31550","AT4G31550.1","member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae.","protein_coding","WRKY DNA-BINDING PROTEIN 11 (WRKY11)","WRKY DNA-BINDING PROTEIN 11 (WRKY11); (AtWRKY11)"]
["AT4G31800","AT4G31800.1","Pathogen-induced transcription factor. Binds W-box sequences in vitro. Forms protein complexes with itself and with WRKY40 and WRKY60. Constitutive expression of WRKY18 enhanced resistance to P. syringae, but its coexpression with WRKY40 or WRKY60 made plants more susceptible to both P. syringae and B. cinerea. WRKY18, WRKY40, and WRKY60 have partially redundant roles in response to the hemibiotrophic bacterial pathogen Pseudomonas syringae and the necrotrophic fungal pathogen Botrytis cinerea, with WRKY18 playing a more important role than the other two. The mRNA is cell-to-cell mobile.","protein_coding","WRKY DNA-BINDING PROTEIN 18 (WRKY18)","WRKY DNA-BINDING PROTEIN 18 (WRKY18);ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 18 (ATWRKY18)"]
["AT4G31920","AT4G31920.1","Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway. Also involved in cytokinin-dependent inhibition of hypocotyl elongation and cytokinin-dependent greening and shooting in tissue culture. ARR1, ARR10, and ARR12 are redundant regulators of drought response, with ARR1 being the most critical. ARR1, ARR10 and ARR12 redundantly bind to the promoter of WUSCHEL (WUS), directly activate its transcription. In parallel, ARR1, ARR10 and ARR12 repress the expression of YUCCAs (YUCs), which encode a key enzyme for auxin biosynthesis, indirectly promoting WUS induction. The regulation of ARR1, ARR10 and ARR12 on WUS and YUCs is required for regeneration and maintenance of shoot meristem.","protein_coding","RESPONSE REGULATOR 10 (RR10)","RESPONSE REGULATOR 10 (ARR10);RESPONSE REGULATOR 10 (RR10)"]
["AT4G32730","AT4G32730.2","Encodes a putative c-myb-like transcription factor with three MYB repeats. Part of the TSO1-MYB3R1 transcriptional module that controls the number and size of the stem cell pools at the shoot apex and root tip; the TSO1-MYB3R1 module is integrated with the cell cycle machinery to control cell division at the shoot meristem.","protein_coding","(PC-MYB1)","(PC-MYB1);MYB DOMAIN PROTEIN 3R1 (MYB3R-1); (ATMYB3R-1);A. THALIANA MYB DOMAIN PROTEIN 3R1 (ATMYB3R1);C-MYB-LIKE TRANSCRIPTION FACTOR 3R-1 (MYB3R1)"]
["AT4G32890","AT4G32890.1","Encodes a member of the GATA factor family of zinc finger transcription factors.","protein_coding","GATA TRANSCRIPTION FACTOR 9 (GATA9)","GATA TRANSCRIPTION FACTOR 9 (GATA9)"]
["AT4G34000","AT4G34000.1","Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.","protein_coding","ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3 (ABF3)","ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 3 (ABF3);DC3 PROMOTER-BINDING FACTOR 5 (DPBF5); (ATABF3)"]
["AT4G34530","AT4G34530.1","Encodes a transcription factor CIB1 (cryptochrome-interacting basic-helix-loop-helix). CIB1 interacts with CRY2 (cryptochrome 2) in a blue light-specific manner in yeast and Arabidopsis cells, and it acts together with additional CIB1-related proteins to promote CRY2-dependent floral initiation. CIB1 positively regulates FT expression.","protein_coding","CRYPTOCHROME-INTERACTING BASIC-HELIX-LOOP-HELIX 1 (CIB1)","CRYPTOCHROME-INTERACTING BASIC-HELIX-LOOP-HELIX 1 (CIB1)"]
["AT4G34590","AT4G34590.1","Encodes a basic domain leucine zipper (bZip) transcription factor bZIP11. Translation is repressed by sucrose that results in ribosome stalling in the uORF2. Directly regulates gene expression of ASN1 and ProDH2, which are enzyme-coding genes involved in amino acid metabolism. Susceptibility factor during Pseudomonas syringae infection.","protein_coding","G-BOX BINDING FACTOR 6 (GBF6)","(ATB2);G-BOX BINDING FACTOR 6 (GBF6);ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 11 (AtbZIP11); (BZIP11); (ATBZIP11)"]
["AT4G34680","AT4G34680.1","Encodes a member of the GATA factor family of zinc finger transcription factors.","protein_coding","GATA TRANSCRIPTION FACTOR 3 (GATA3)","GATA TRANSCRIPTION FACTOR 3 (GATA3)"]
["AT4G34990","AT4G34990.1","Member of the R2R3 transcription factor gene family.Transcriptional regulator involved in regulation of ABA response during seed germination and drought response.","protein_coding","MYB DOMAIN PROTEIN 32 (MYB32)","MYB DOMAIN PROTEIN 32 (AtMYB32);MYB DOMAIN PROTEIN 32 (MYB32)"]
["AT4G35390","AT4G35390.1","AT-hook protein of GA feedback 1;(source:Araport11)","protein_coding","AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 25 (AHL25)","AT-HOOK PROTEIN OF GA FEEDBACK 1 (AGF1);AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 25 (AHL25)"]
["AT4G35550","AT4G35550.1","Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. WOX13 is the only family member that does not contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box.","protein_coding","WUSCHEL RELATED HOMEOBOX 13 (WOX13)","(HB-4);WUSCHEL RELATED HOMEOBOX 13 (WOX13); (ATWOX13)"]
["AT4G36620","AT4G36620.1","Encodes a member of the GATA factor family of zinc finger transcription factors.","protein_coding","GATA TRANSCRIPTION FACTOR 19 (GATA19)","GATA TRANSCRIPTION FACTOR 19 (GATA19);HANABA TARANU LIKE 2 (HANL2)"]
["AT4G36730","AT4G36730.1","member of a gene family encoding basic leucine zipper proteins (GBFs) which bind the G-box","protein_coding","G-BOX BINDING FACTOR 1 (GBF1)","G-BOX BINDING FACTOR 1 (GBF1); (ATGBF1)"]
["AT4G36780","AT4G36780.1","BES1/BZR1 homolog 2;(source:Araport11)","protein_coding","BES1/BZR1 HOMOLOG 2 (BEH2)","BES1/BZR1 HOMOLOG 2 (BEH2)"]
["AT4G36900","AT4G36900.1","Encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family (RAP2.10). The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.9 and RAP2.1.","protein_coding","RELATED TO AP2 10 (RAP2.10)","RELATED TO AP2 10 (RAP2.10);DREB AND EAR MOTIF PROTEIN 4 (DEAR4)"]
["AT4G36930","AT4G36930.1","Encodes a transcription factor of the bHLH protein family. Mutants have abnormal, unfused carpels and reduced seed dormancy.","protein_coding","SPATULA (SPT)","SPATULA (SPT)"]
["AT4G36990","AT4G36990.1","Encodes a protein whose sequence is similar to heat shock factors that regulate the expression of heat shock proteins. Transcript level is increased in response to heat shock. However, overexpression of this gene did not result in the increase of decrease of heat shock proteins.","protein_coding","HEAT SHOCK FACTOR 4 (HSF4)","HEAT SHOCK FACTOR 4 (HSF4);CLASS B HEAT SHOCK FACTOR B1 (HSFB1);ARABIDOPSIS THALIANA CLASS B HEAT SHOCK FACTOR B1 (AT-HSFB1);ARABIDOPSIS THALIANA HEAT SHOCK FACTOR 4 (ATHSF4);TL1-BINDING TRANSCRIPTION FACTOR 1 (TBF1)"]
["AT4G37180","AT4G37180.2","UIF1 is a nuclear and cytoplasmically localized myb-domain containing member of the GARP G2-like subfamily of transcription factors. Interacts with ULT1 and binds to the WUS promoter. UIF1 binding domains are also found in CUC and AG promoters suggesting they are also direct targets. This locus was also identified as a putative cytoskeletal protein in a yeast screen.","protein_coding","ULT1 INTERACTING FACTOR 1 (UIF1)","ULT1 INTERACTING FACTOR 1 (UIF1);HRS1 HOMOLOG5 (HHO5)"]
["AT4G37790","AT4G37790.1","Encodes homeobox protein HAT22, member of the HD-Zip II family. The mRNA is cell-to-cell mobile.","protein_coding","(HAT22)","(HAT22);ABA INSENSITIVE GROWTH 1 (ABIG1);BRASSINOSTEROID-RELATED HOMEOBOX 3 (BHB3)"]
["AT4G38170","AT4G38170.1","FAR1-related sequence 9;(source:Araport11)","protein_coding","FAR1-RELATED SEQUENCE 9 (FRS9)","FAR1-RELATED SEQUENCE 9 (FRS9)"]
["AT4G38620","AT4G38620.1","Encodes a R2R3 MYB protein which is involved in the response to UV-B. It functions as a repressor of target gene expression. One of its target genes encodes cinnamate 4-hydroxylase; mutants accumulate sinapate esters in their leaves. MYB4 binds to its own promoter and represses its own expression. Nuclear localization of MYB4 depends on the action of the beta importin SAD2. The mRNA is cell-to-cell mobile.","protein_coding","MYB DOMAIN PROTEIN 4 (MYB4)","MYB DOMAIN PROTEIN 4 (ATMYB4);MYB DOMAIN PROTEIN 4 (MYB4)"]
["AT4G38680","AT4G38680.1","Encodes a glycine-rich protein that binds nucleic acids and promotes DNA melting. Its transcript and protein levels are up-regulated in response to cold treatment with protein levels peaking earlier in shoots (~10-14 days) than in roots (~21 days). It is normally expressed in meristematic regions and developing tissues where cell division occurs. RNAi and antisense lines with lower levels of CSP2/GRP2 transcripts flower earlier than wild type plants and have some defects in anther and seed development.","protein_coding","GLYCINE RICH PROTEIN 2 (GRP2)","COLD SHOCK PROTEIN 2 (CSP2);ARABIDOPSIS THALIANA COLD SHOCK PROTEIN 2 (ATCSP2);GLYCINE RICH PROTEIN 2 (GRP2);COLD SHOCK DOMAIN PROTEIN 2 (CSDP2)"]
["AT4G38910","AT4G38910.2","Encodes a basic pentacysteine protein that is localized to the nucleus and specifically binds in vitro to GA dinucleotide repeats.","protein_coding","BASIC PENTACYSTEINE 5 (BPC5)","BASIC PENTACYSTEINE 5 (BPC5)"]
["AT4G39780","AT4G39780.1","encodes a member of the DREB subfamily A-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 8 members in this subfamily including RAP2.4.","protein_coding","(ERF60)","(ERF60)"]
["AT5G02030","AT5G02030.1","Mutant has additional lateral organs and phyllotaxy defect. Encodes a homeodomain transcription factor. Has sequence similarity to the Arabidopsis ovule development regulator Bell1. Binds directly to the AGAMOUS cis-regulatory element. Its localization to the nucleus is dependent on the coexpression of either STM or BP.","protein_coding","REPLUMLESS (RPL)","VAAMANA (VAN);LARSON (LSN);PENNYWISE (PNY);BEL1-LIKE HOMEODOMAIN 9 (BLH9);BELLRINGER (BLR);REPLUMLESS (RPL); (HB-6)"]
["AT5G02320","AT5G02320.1","Encodes a putative c-MYB-like transcription factor of the MYB3R factor gene family (MYB3R5). Member of DREAM complex.","protein_coding","MYB DOMAIN PROTEIN 3R-5 (MYB3R-5)","MYB DOMAIN PROTEIN 3R-5 (MYB3R-5);ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 3R5 (ATMYB3R5)"]
["AT5G02840","AT5G02840.1","Encodes RVE4, a homolog of the circadian rhythm regulator RVE8. rve4 rve6 rve8 triple mutants display an extremely long circadian period, with delayed and reduced expression of evening-phased clock genes. Involved in heat shock response.","protein_coding","LHY/CCA1-LIKE 1 (LCL1)","REVEILLE 4 (RVE4);LHY/CCA1-LIKE 1 (LCL1)"]
["AT5G03150","AT5G03150.1","JKD is a nuclear-localized putative transcription factor of the BIRDS/IDD C2H2 zinc finger family. JKD and its homologue BIB, restrict SHR movement to a single layer, the endodermis, and delimit tissue boundaries in the root meristem through a process that involves nuclear retention through protein complex formation. JKD mutation leads to periclinal divisions in the cortex, increased cell numbers in the circumference of the cortical and epidermal layers, a disrupted QC marker expression pattern, and disorganized QC and columella cells. This effect is enhanced in jkd bib double mutants where tissue boundaries cannot be maintained due to excessive SHR movement. JKD and BIB restrict CYCIND6 expression to cortex and endodermis stem cells to prevent formative divisions in the ground tissue. JKD physically interacts with cell fate determinants SCR and SHR in a cell type specific manner. Native FRET-FLIM analysis showed higher JKD-SCR complex in the endodermis and predominant JKD-SHR in the QC and cortex/endodermis stem cells. In addition, JKD, SCR and SHR form a ternary complex whose conformation is cell type dependent, conformational changes of this complex differentially regulate SCR and WOX5 expression to specify endodermal cell fate and QC function respectively. Its mRNA is cell-to-cell mobile.","protein_coding","JACKDAW (JKD)","JACKDAW (JKD)"]
["AT5G04340","AT5G04340.1","Encodes a C2H2 zinc finger transcription factor that coordinately activates phytochelatin-synthesis related gene expression and directly targets GSH1 by binding to its promoter to positively regulate Cd accumulation and tolerance.","protein_coding","ZINC FINGER OF ARABIDOPSIS THALIANA 6 (ZAT6)","COLD INDUCED ZINC FINGER PROTEIN 2 (CZF2); (C2H2); (ATZAT6);ZINC FINGER OF ARABIDOPSIS THALIANA 6 (ZAT6)"]
["AT5G05090","AT5G05090.1","Homeodomain-like superfamily protein;(source:Araport11)","protein_coding"]
["AT5G05410","AT5G05410.1","Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein contains one AP2 domain. Overexpression of transcriptional activation domain of DREB2A resulted in significant drought stress tolerance but only slight freezing tolerance in transgenic Arabidopsis plants. Microarray and RNA gel blot analyses revealed that DREB2A regulates expression of many water stress?inducible genes. The mRNA is cell-to-cell mobile.","protein_coding","DRE-BINDING PROTEIN 2A (DREB2A)","DRE-BINDING PROTEIN 2A (DREB2A);DEHYDRATION-RESPONSIVE ELEMENT BINDING PROTEIN 2 (DREB2)"]
["AT5G05550","AT5G05550.2","Encodes trihelix-domain transcription factor VFP5. Interacts with agrobacterium virulence protein VirF.","protein_coding","VFP5 (VFP5)","VFP5 (VFP5);EIN2 NUCLEAR ASSOCIATED PROTEIN 2 (ENAP2); (At5g05550)"]
["AT5G06950","AT5G06950.1","Transcription factor of the B-ZIP family that has high affinity for C-box motifs. Interacts with NPR1 and may regulate PR gene expression. Phosphorylated by a CK2-like protein in vitro. Phosphorylation is enhanced by salicylic acid treatment. Under stress conditions, it acts to negatively control SA accumulation. that induce the hormone production.","protein_coding","(AHBP-1B)","(AHBP-1B);TGACG SEQUENCE-SPECIFIC BINDING PROTEIN 2 (TGA2); (ATTGA2)"]
["AT5G06960","AT5G06960.1","Encodes a basic leucine zipper (B-ZIP) containing protein that interacts with NPR1 to promote expression of salicylic acid induced genes. Binds the ocs-element.","protein_coding","OCS-ELEMENT BINDING FACTOR 5 (OBF5)","OCS-ELEMENT BINDING FACTOR 5 (OBF5);TGACG MOTIF-BINDING FACTOR 5 (TGA5)"]
["AT5G08130","AT5G08130.8","Encodes a basic helix-loop-helix (bHLH) family protein BIM1 (BES1-INTERACTING MYC-LIKE 1), involved in brassinosteroid signaling. It synergistically interacts with BES1 to bind to E box sequences (CANNTG). Positively modulates the shade avoidance syndrome in Arabidopsis seedlings.","protein_coding","BES1-INTERACTING MYC-LIKE1 (BIM1)","BES1-INTERACTING MYC-LIKE1 (BIM1)"]
["AT5G08330","AT5G08330.1","Circadian oscillator protein which interacts with bZIP63 and regulates a response of the circadian oscillator to sugar. Is not required for the sugar-induced circadian phase advance in the morning; regulates a response of CCA1 to sugars. Promotes together with TCP7, 8, 14, 15, 21, 22 and 23 endoreduplication-dependent cell expansion in leaf.","protein_coding","TCP DOMAIN PROTEIN 21 (TCP21)","(ATTCP21);CCA1 HIKING EXPEDITION (CHE);TCP DOMAIN PROTEIN 21 (TCP21); (AtTCP11);TCP DOMAIN PROTEIN 11 (TCP11)"]
["AT5G09410","AT5G09410.3","calmodulin-binding protein, similar to another ethylene-upregulated calmodulin-binding protein ER1 GI:11612392 from (Nicotiana tabacum)","protein_coding","ETHYLENE INDUCED CALMODULIN BINDING PROTEIN (EICBP.B)","ETHYLENE INDUCED CALMODULIN BINDING PROTEIN (EICBP.B)"]
["AT5G10030","AT5G10030.1","Encodes a member of basic leucine zipper transcription gene family. Nomenclature according to Xiang, et al. (1997).","protein_coding","TGACG MOTIF-BINDING FACTOR 4 (TGA4)","OCS ELEMENT BINDING FACTOR 4 (OBF4);TGACG MOTIF-BINDING FACTOR 4 (TGA4)"]
["AT5G10140","AT5G10140.1","MADS-box protein encoded by FLOWERING LOCUS C - transcription factor that functions as a repressor of floral transition and contributes to temperature compensation of the circadian clock. Expression is downregulated during cold treatment. Vernalization, FRI and the autonomous pathway all influence the state of FLC chromatin. Both maternal and paternal alleles are reset by vernalization, but their earliest activation differs in timing and location. Histone H3 trimethylation at lysine 4 and histone acetylation are associated with active FLC expression, whereas histone deacetylation and histone H3 dimethylation at lysines 9 and 27 are involved in FLC repression. Expression is also repressed by two small RNAs (30- and 24-nt) complementary to the FLC sense strand 3? to the polyA site. The small RNAs are most likely derived from an antisense transcript of FLC. Interacts with SOC1 and FT chromatin in vivo. Member of a protein complex.","protein_coding","FLOWERING LOCUS C (FLC)","FLOWERING LOCUS C (FLC);REDUCED STEM BRANCHING 6 (RSB6);AGAMOUS-LIKE 25 (AGL25);FLOWERING LOCUS F (FLF)"]
["AT5G11260","AT5G11260.2","Basic leucine zipper (bZIP) transcription factor. Nuclear localization. Involved in light-regulated transcriptional activation of G-box-containing promoters. Negatively regulated by Cop1. Although cytokinins do not appear to affect the gene Primes promoter activity, they appear to stabilize the protein. HY5 plays a role in anthocyanin accumulation in far-red light and blue light, but not in red light or in the dark. Mutant studies showed that the gene product is involved in the positive regulation of the PHYA-mediated inhibition of hypocotyl elongation. Binds to G- and Z-boxes, and other ACEs, but not to E-box. Loss of function mutation shows ABA resistant seedling phenotypes suggesting involvement for HY5 in mediating ABA responses. Binds to the promoter of ABI5 and regulates its expression.","protein_coding"]
["AT5G11510","AT5G11510.1","Arabidopsis thaliana putative c-myb-like transcription factor MYB3R-4. Functions in powdery mildew induced host endoreduplication at the site of infection. Activates mitotic gene expression, cytokinin response.","protein_coding","MYB DOMAIN PROTEIN 3R-4 (MYB3R-4)","MYB DOMAIN PROTEIN 3R-4 (MYB3R-4);MYB DOMAIN PROTEIN 3R4 (AtMYB3R4)"]
["AT5G13330","AT5G13330.1","encodes a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.","protein_coding","RELATED TO AP2 6L (Rap2.6L)","RELATED TO AP2 6L (Rap2.6L)"]
["AT5G13790","AT5G13790.2","AGL15 (AGAMOUS-Like 15) is a member of the MADS domain family of regulatory factors. Although AGL15 is preferentially expressed during embryogenesis, AGL15 is also expressed in leaf primordia, shoot apical meristems and young floral buds, suggesting that AGL15 may play a role during post-germinative development. Transgenic plants that ectopically express AGL15 show delays in the transition to flowering, perianth abscission and senescence and fruit and seed maturation. Role in embryogenesis and gibberellic acid catabolism. Targets B3 domain transcription factors that are key regulators of embryogenesis.AGL15 binds the HAE promoter in floral receptacles and represses HAE expression. AGL15 is phosphorylated in a MKK4/5 dependent manner in floral receptacles. Serines 231 and 257 are phosphorylated in floral receptacles. AGL15 also directly regulates the expression of the peroxidase PRX17, linking it to lignified tissue expression.","protein_coding"]
["AT5G16600","AT5G16600.1","Encodes a transcriptional regulator that directly activates lignin biosynthesis genes and phenylalanine biosynthesis genes during secondary wall formation.","protein_coding","MYB DOMAIN PROTEIN 43 (MYB43)","MYB DOMAIN PROTEIN 43 (AtMYB43);MYB DOMAIN PROTEIN 43 (MYB43)"]
["AT5G17300","AT5G17300.1","Myb-like transcription factor that regulates hypocotyl growth by regulating free auxin levels in a time-of-day specific manner.","protein_coding","REVEILLE 1 (RVE1)","REVEILLE 1 (RVE1)"]
["AT5G18450","AT5G18450.1","encodes a member of the DREB subfamily A-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are eight members in this subfamily including DREB2A AND DREB2B that are involved in response to drought.","protein_coding"]
["AT5G18560","AT5G18560.1","Encodes PUCHI, a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole. PUCHI is required for morphogenesis in the early lateral root primordium of Arabidopsis. Expressed in early floral meristem (stage 1 to 2). Required for early floral meristem growth and for bract suppression. Triple mutant with bop1 and bop2 displays a strong defect in the determination of floral meristem identity with reduced LFY expression and the lack of AP1 expression.","protein_coding","(PUCHI)","(PUCHI)"]
["AT5G23280","AT5G23280.1","Transcription factor which plays an important role during leaf and hypocotyl development, redundantly, with at least six class I TCPs, and regulates the expression of CYCD1;1 to affect endoreplication. Promotes together with TCP8, 14 and 15 endoreduplication-dependent cell expansion in leaf.","protein_coding","TCP DOMAIN PROTEIN 7 (TCP7)","(ATTCP7);TCP DOMAIN PROTEIN 7 (TCP7)"]
["AT5G25190","AT5G25190.1","encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.","protein_coding","ETHYLENE AND SALT INDUCIBLE 3 (ESE3)","ETHYLENE AND SALT INDUCIBLE 3 (ESE3)"]
["AT5G25830","AT5G25830.1","Encodes a member of the GATA factor family of zinc finger transcription factors.","protein_coding","GATA TRANSCRIPTION FACTOR 12 (GATA12)","GATA TRANSCRIPTION FACTOR 12 (GATA12)"]
["AT5G29000","AT5G29000.2","MYB-CC family member. PHL1 acts redundantly with PHR1 to regulate responses to Pi starvation.","protein_coding","PHR1-LIKE 1 (PHL1)","PHR1-LIKE 1 (PHL1)"]
["AT5G38860","AT5G38860.1","Encodes BES1-INTERACTING MYC-LIKE 3 (BIM3), a PAR1 (PHYTOCHROME RAPIDLY REGULATED 1)-interacting protein that positively modulates the shade avoidance syndrome in Arabidopsis seedlings.","protein_coding","BES1-INTERACTING MYC-LIKE PROTEIN 3 (BIM3)","BES1-INTERACTING MYC-LIKE PROTEIN 3 (BIM3)"]
["AT5G39610","AT5G39610.1","Encodes a NAC-domain transcription factor. Positively regulates aging-induced cell death and senescence in leaves. This gene is upregulated in response to salt stress in wildtype as well as NTHK1 transgenic lines although in the latter case the induction was drastically reduced. It was also upregulated by ABA, ACC and NAA treatment, although in the latter two cases, the induction occurred relatively late when compared with NaCl or ABA treatments. Note: this protein (AtNAC6) on occasion has also been referred to as AtNAC2, not to be confused with the AtNAC2 found at locus AT3G15510.","protein_coding","NAC DOMAIN CONTAINING PROTEIN 6 (NAC6)","NAC DOMAIN CONTAINING PROTEIN 2 (NAC2);NAC DOMAIN CONTAINING PROTEIN 6 (ATNAC6);ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 92 (ANAC092);ORESARA 1 (ORE1);NAC DOMAIN CONTAINING PROTEIN 2 (ATNAC2);NAC DOMAIN CONTAINING PROTEIN 6 (NAC6)"]
["AT5G39660","AT5G39660.1","Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Interacts with LKP2 and FKF1, but its overexpression does not change flowering time under short or long day conditions.","protein_coding","CYCLING DOF FACTOR 2 (CDF2)","CYCLING DOF FACTOR 2 (CDF2)"]
["AT5G42520","AT5G42520.1","Encodes a member of the BASIC PENTACYSTEINE (BPC) proteins. BPC proteins are plant-specific transcription factors present throughout land plants. BPC transcription factor family is integral for a wide range of processes that support normal growth and development.","protein_coding","BASIC PENTACYSTEINE 6 (BPC6)","BASIC PENTACYSTEINE 6 (BPC6);ARABIDOPSIS THALIANA BASIC PENTACYSTEINE 6 (ATBPC6); (BBR/BPC6)"]
["AT5G44080","AT5G44080.1","Basic-leucine zipper (bZIP) transcription factor family protein;(source:Araport11)","protein_coding"]
["AT5G44180","AT5G44180.1","Interacts with CHR11, CHR17, and ARID5, several known subunits of ISWI. JA biosynthesisis is positively regulated by this chromatin remodeling complex, thereby promoting stamen filament elongation.","protein_coding","RINGLET 2 (RLT2)","RINGLET 2 (RLT2)"]
["AT5G44210","AT5G44210.1","encodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family (ATERF-9). The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.","protein_coding","ERF DOMAIN PROTEIN 9 (ERF9)","ERF DOMAIN PROTEIN 9 (ERF9);ERF DOMAIN PROTEIN- 9 (ATERF-9);ERF DOMAIN PROTEIN 9 (ATERF9)"]
["AT5G45300","AT5G45300.3","Encodes a beta-amylase-like protein present in the nucleus rather than targeted to the chloroplast. Contains BRASSINAZOLE RESISTANT1 (BZR1)-type DNA binding domains. Activates gene expression in protoplast transactivation assays.","protein_coding"]
["AT5G46880","AT5G46880.1","homeobox-7;(source:Araport11)","protein_coding","HOMEOBOX-7 (HB-7)","HOMEODOMAIN GLABROUS 5 (HDG5);HOMEOBOX-7 (HB-7)"]
["AT5G47140","AT5G47140.1","Encodes a member of the GATA factor family of zinc finger transcription factors.","protein_coding","GATA TRANSCRIPTION FACTOR 27 (GATA27)","GATA TRANSCRIPTION FACTOR 27 (GATA27)"]
["AT5G47220","AT5G47220.1","Encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family (ATERF-2). The protein contains one AP2 domain. Functions as activator of GCC box?dependent transcription. Positive regulator of JA-responsive defense genes and resistance to F. oxysporum and enhances JA inhibition of root elongation.","protein_coding","ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2 (ERF2)","ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2 (ATERF2);ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2 (ERF2);ETHYLENE RESPONSE FACTOR- 2 (ATERF-2)"]
["AT5G47660","AT5G47660.1","Homeodomain-like superfamily protein;(source:Araport11)","protein_coding"]
["AT5G49300","AT5G49300.1","Encodes a member of the GATA factor family of zinc finger transcription factors.","protein_coding","GATA TRANSCRIPTION FACTOR 16 (GATA16)","GATA TRANSCRIPTION FACTOR 16 (GATA16)"]
["AT5G49450","AT5G49450.1","Encodes a transcription activator is a positive regulator of plant tolerance to salt, osmotic and drought stresses.","protein_coding","BASIC LEUCINE-ZIPPER 1 (bZIP1)","BASIC LEUCINE-ZIPPER 1 (bZIP1);BASIC LEUCINE-ZIPPER 1 (AtbZIP1)"]
["AT5G51910","AT5G51910.1","TCP family transcription factor;(source:Araport11)","protein_coding","TCP DOMAIN PROTEIN 19 (TCP19)","TCP DOMAIN PROTEIN 19 (TCP19)"]
["AT5G52660","AT5G52660.2","Encodes RVE6, a homolog of the circadian rhythm regulator RVE8. rve4 rve6 rve8 triple mutants display an extremely long circadian period, with delayed and reduced expression of evening-phased clock genes.","protein_coding","REVEILLE 6 (RVE6)","REVEILLE 6 (RVE6)"]
["AT5G53290","AT5G53290.1","encodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily. CRF proteins relocalize to the nucleus in response to cytokinin.","protein_coding","CYTOKININ RESPONSE FACTOR 3 (CRF3)","CYTOKININ RESPONSE FACTOR 3 (CRF3)"]
["AT5G56860","AT5G56860.1","Encodes a member of the GATA factor family of zinc finger transcription factors. Modulate chlorophyll biosynthesis and glutamate synthase (GLU1/Fd-GOGAT) expression.","protein_coding","GATA, NITRATE-INDUCIBLE, CARBON METABOLISM-INVOLVED (GNC)","GATA TRANSCRIPTION FACTOR 21 (GATA21);GATA, NITRATE-INDUCIBLE, CARBON METABOLISM-INVOLVED (GNC)"]
["AT5G56930","AT5G56930.1","CCCH-type zinc finger family protein;(source:Araport11)","protein_coding","EMBRYO DEFECTIVE 1789 (emb1789)","EMBRYO DEFECTIVE 1789 (emb1789); (ATC3H65)"]
["AT5G57150","AT5G57150.4","basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)","protein_coding"]
["AT5G59430","AT5G59430.1","Encodes a telomeric repeat binding protein with a DNA binding domain at its C terminus. The DNA binding domain has a preference for GGTTTAG sequences and at least five of these repeats are required for recognition by a nearly full-length TRP1 protein.","protein_coding","TELOMERIC REPEAT BINDING PROTEIN 1 (TRP1)","TELOMERIC REPEAT BINDING PROTEIN 1 (TRP1);TELOMERE REPEAT BINDING PROTEIN 1 (ATTRP1)"]
["AT5G59570","AT5G59570.1","Encodes BOA (BROTHER OF LUX ARRHYTHMO), a component of the circadian clock. The mRNA is cell-to-cell mobile.","protein_coding","BROTHER OF LUX ARRHYTHMO (BOA)","BROTHER OF LUX ARRHYTHMO (BOA)"]
["AT5G60200","AT5G60200.1","Encodes a Dof-type transcription factor. PEAR protein involved in the formation of a short-range concentration gradient that peaks at protophloem sieve elements, and activates gene expression that promotes radial growth. Locally promotes transcription of inhibitory HD-ZIP III genes, and thereby establishes a negative-feedback loop that forms a robust boundary that demarks the zone of cell division.","protein_coding","TARGET OF MONOPTEROS 6 (TMO6)","TARGET OF MONOPTEROS 6 (TMO6);DNA BINDING WITH ONE FINGER 5.3 (DOF5.3)"]
["AT5G60850","AT5G60850.1","Encodes a zinc finger protein.","protein_coding","OBF BINDING PROTEIN 4 (OBP4)","(ATDOF5.4);OBF BINDING PROTEIN 4 (OBP4)"]
["AT5G60970","AT5G60970.1","TCP gene involved in heterochronic control of leaf differentiation. Transcription factor which controls thermomorphogenesis by positively regulating PIF4 activity.","protein_coding","TEOSINTE BRANCHED 1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 5 (TCP5)","TEOSINTE BRANCHED 1, CYCLOIDEA AND PCF TRANSCRIPTION FACTOR 5 (TCP5)"]
["AT5G61270","AT5G61270.1","Basic helix-loop-helix (bHLH) phytochrome interacting factor. Interacts specifically with the far-red light?absorbing Pfr form of phyB through a conserved domain called the active phyB binding motif. Upon light exposure, PIF7 rapidly migrates to intranuclear speckles, where it colocalizes with phyB. Role as negative regulator of phyB-mediated seedling deetiolation.","protein_coding","PHYTOCHROME-INTERACTING FACTOR7 (PIF7)","PHYTOCHROME-INTERACTING FACTOR7 (PIF7)"]
["AT5G61600","AT5G61600.1","encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5. Involved in regulating root architecture.","protein_coding","ETHYLENE RESPONSE FACTOR 104 (ERF104)","ETHYLENE RESPONSE FACTOR 104 (ERF104)"]
["AT5G62020","AT5G62020.1","member of Heat Stress Transcription Factor (Hsf) family The mRNA is cell-to-cell mobile.","protein_coding","HEAT SHOCK TRANSCRIPTION FACTOR B2A (HSFB2A)","HEAT SHOCK TRANSCRIPTION FACTOR B2A (HSFB2A);ARABIDOPSIS THALIANA HEAT SHOCK TRANSCRIPTION FACTOR B2A (AT-HSFB2A)"]
["AT5G62470","AT5G62470.2","Encodes a R2R3 type Myb transcription factor whose expression is strongly induced by abscisic acid. Mediates abscisic acid signaling during drought stress response. Promotes seed fatty acid accumulation.","protein_coding","MYB DOMAIN PROTEIN 96 (MYB96)","MYB DOMAIN PROTEIN 96 (MYB96)"]
["AT5G63260","AT5G63260.2","Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11)","protein_coding","(ATC3H67)","(ATC3H67)"]
["AT5G64220","AT5G64220.1","CAMTA2 proteins bind to the AtALMT1 promoter at in vitro. The gene itself is Al inducible, and AtALMT1 expression is partially repressed in camta2 mutant. The mRNA is cell-to-cell mobile.","protein_coding","CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 (CAMTA2)","CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 2 (CAMTA2)"]
["AT5G64750","AT5G64750.1","Encodes a putative transcription factor containing an AP2 domain. Is a member of the ERF (ethylene response factor) subfamily B-4 of ERF/AP2 transcription factor family. Expressed in response to ABA, osmotic stress, sugar stress and drought. Mutants are hypersensitive to these stresses. May be involved in regulation of ABA mediated stress response. The mRNA is cell-to-cell mobile.","protein_coding","ABA REPRESSOR1 (ABR1)","(ERF111);ABA REPRESSOR1 (ABR1)"]
["AT5G65050","AT5G65050.3","Originally published as Agamous like MADS-box protein AGL31. One of a group of MADS box genes involved in control of flowering time. Four variant sequences have been identified for this locus but have not been characterized for differences in expression pattern and/or function.","protein_coding","AGAMOUS-LIKE 31 (AGL31)","MADS AFFECTING FLOWERING 2 (MAF2);AGAMOUS-LIKE 31 (AGL31)"]
["AT5G65060","AT5G65060.1","MADS domain protein - flowering regulator that is closely related to FLC","protein_coding","MADS AFFECTING FLOWERING 3 (MAF3)","AGAMOUS-LIKE 70 (AGL70);MADS AFFECTING FLOWERING 3 (MAF3); (FCL3)"]
["AT5G65070","AT5G65070.3","Encodes MADS-box containing FLC paralog. Five splice variants have been identified but not characterized with respect to expression patterns and/or differing function. Overexpression of the gene in the Landsberg ecotype leads to a delay in flowering, transcript levels of MAF4 are reduced after a 6 week vernalization.","protein_coding","MADS AFFECTING FLOWERING 4 (MAF4)","MADS AFFECTING FLOWERING 4 (MAF4)"]
["AT5G65080","AT5G65080.2","Is upregulated during vernalization and regulates flowering time. Encodes MADS-domain protein. Two variants encoding proteins of 198 and 184 amino acids have been reported.","protein_coding","MADS AFFECTING FLOWERING 5 (MAF5)","AGAMOUS-LIKE 68 (AGL68);MADS AFFECTING FLOWERING 5 (MAF5)"]
["AT5G65210","AT5G65210.1","Encodes TGA1, a redox-controlled regulator of systemic acquired resistance. TGA1 targets the activation sequence-1 (as-1) element of the promoter region of defense proteins. TGA1 are S-nitrosylated.","protein_coding","TGACG SEQUENCE-SPECIFIC BINDING PROTEIN 1 (TGA1)","TGACG SEQUENCE-SPECIFIC BINDING PROTEIN 1 (TGA1)"]
["AT5G65410","AT5G65410.1","Encodes ZFHD2, a member of the zinc finger homeodomain transcriptional factor family.Gain of function of ATHB25 (35S and UBQ10 proomoters) and double loss of function of ATHB25 and ATHB22 increases and decreases, respectively, seed longevity. This phenotype is maternal and related to seed coat alterations. Gain of function increases expression of GA3OX2 and GA4 and GA1 levels. Together with REM7 induces the expression of genes controlling shoot stem characteristics by ectopic expression in roots.","protein_coding","HOMEOBOX PROTEIN 25 (HB25)","ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 25 (ATHB25);ZINC FINGER HOMEODOMAIN 1 (ZHD1);HOMEOBOX PROTEIN 25 (HB25);ZINC FINGER HOMEODOMAIN 2 (ZFHD2)"]
["AT5G65510","AT5G65510.1","Encodes one of three PLETHORA transcription factors required to maintain high levels of PIN1 expression at the periphery of the meristem and modulate local auxin production in the central region of the SAM which underlies phyllotactic transitions.","protein_coding","AINTEGUMENTA-LIKE 7 (AIL7)","PLETHORA 7 (PLT7);AINTEGUMENTA-LIKE 7 (AIL7)"]
["AT5G65590","AT5G65590.1","Encodes a plant-specific Dof-type transcription factor expressed in maturing guard cells, but not in guard mother cells. It regulates essential processes of stomatal guard cell maturation and functions as a key transcription factor regulating the final stages of guard cell differentiation.","protein_coding","STOMATAL CARPENTER 1 (SCAP1)","STOMATAL CARPENTER 1 (SCAP1)"]
["AT5G66320","AT5G66320.1","Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate.","protein_coding","GATA TRANSCRIPTION FACTOR 5 (GATA5)","GATA TRANSCRIPTION FACTOR 5 (GATA5)"]
["AT5G66730","AT5G66730.1","C2H2-like zinc finger protein;(source:Araport11)","protein_coding","INDETERMINATE DOMAIN 1 (IDD1)","ENHYDROUS (ENY);INDETERMINATE DOMAIN 1 (IDD1)"]
["AT5G66940","AT5G66940.1","Encodes a nuclear localized DOF-domain binding transcription factor.","protein_coding","(ATDOF5.8)","(ATDOF5.8)"]
["AT5G67110","AT5G67110.1","encodes a myc/bHLH transcription factor-like protein. Gene product is involved in fruit dehiscence. Mutant siliques fail to dehisce.","protein_coding","ALCATRAZ (ALC)","ALCATRAZ (ALC)"]
["AT5G67190","AT5G67190.1","encodes a member of the DREB subfamily A-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 16 members in this subfamily including RAP2.1, RAP2.9 and RAP2.10.","protein_coding","DREB AND EAR MOTIF PROTEIN 2 (DEAR2)","DREB AND EAR MOTIF PROTEIN 2 (DEAR2)"]
["AT5G67580","AT5G67580.1","Encodes a telomeric DNA binding protein and Single Myb Histone (SMH) gene family member. In vitro, the protein preferentially binds double-stranded telomeric repeats, but it can also bind to the single G-rich telomeric strand.","protein_coding","(TRB2)","(ATTBP3);TELOMERE REPEAT BINDING FACTOR 2 (ATTRB2);TELOMERE-BINDING PROTEIN 3 (TBP3); (TRB2)"]