{"text_format":"3","workbook":"xls","n_sheets":7,"sheets":["C1","C2","C3","C4","C5","C6","C7"],"read":"whole","date_system":"1900","formulas":"cached_only"}

{"sheet":"C1","index":0,"n_rows":36,"n_cols":10,"rows_kept":36,"flags":["formulas_cached_only"]}
["# Supplementary table 5.1. GO terms of lncRNA subtypes (C1)"]
["Category","ID","Description","GeneRatio","BgRatio","pvalue","p.adjust","qvalue","geneID","Count"]
["BP","GO:0002479","antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent","12/368","75/17913",{"v":3.86e-08,"d":"3.86E-08"},0.000125569,0.000112096,"HLA-B/HLA-A/PSMD3/B2M/PSMB3/TAPBP/HLA-E/PSMB8/SNAP23/TAP1/PSMA1/CD36",12]
["BP","GO:0042590","antigen processing and presentation of exogenous peptide antigen via MHC class I","12/368","78/17913",{"v":6.07e-08,"d":"6.07E-08"},0.000125569,0.000112096,"HLA-B/HLA-A/PSMD3/B2M/PSMB3/TAPBP/HLA-E/PSMB8/SNAP23/TAP1/PSMA1/CD36",12]
["BP","GO:0060337","type I interferon signaling pathway","12/368","91/17913",{"v":3.47e-07,"d":"3.47E-07"},0.000358908,0.000320398,"HLA-B/IFITM2/IFITM3/HLA-A/HLA-E/PSMB8/IRF1/EGR1/NLRC5/CNOT7/WNT5A/ISG20",12]
["BP","GO:0071357","cellular response to type I interferon","12/368","91/17913",{"v":3.47e-07,"d":"3.47E-07"},0.000358908,0.000320398,"HLA-B/IFITM2/IFITM3/HLA-A/HLA-E/PSMB8/IRF1/EGR1/NLRC5/CNOT7/WNT5A/ISG20",12]
["BP","GO:0048545","response to steroid hormone","23/368","375/17913",{"v":3.35e-06,"d":"3.35E-06"},0.001735629,0.001549401,"CDO1/PADI2/IDH1/LMO3/MDK/IL1RN/IGFBP2/SDC1/FOSB/THBS1/SCGB2A1/GLB1/ERRFI1/DUSP1/STRN3/TAT/EPO/DAXX/RORB/RUNX1/SKP2/TFPI/TXNIP",23]
["BP","GO:0010038","response to metal ion","20/368","335/17913",{"v":2.16e-05,"d":"2.16E-05"},0.006893048,0.006153443,"SLC40A1/S100A8/B2M/CAMK2D/KIT/ATF4/IGFBP2/SDC1/MT1E/FOSB/THBS1/S100A13/DUSP1/TAT/DAXX/CUTA/WNT5A/MT2A/ERCC1/TXNIP",20]
["BP","GO:0070555","response to interleukin-1","14/368","183/17913",{"v":2.64e-05,"d":"2.64E-05"},0.007796205,0.006959693,"SLC30A8/PSMD3/NFKBIA/PSMB3/KMO/IL1RN/PSMB8/EGR1/PLCB1/CD47/SQSTM1/PSMA1/EPO/TFPI",14]
["BP","GO:0071243","cellular response to arsenic-containing substance","5/368","19/17913",{"v":3.27e-05,"d":"3.27E-05"},0.008657524,0.007728595,"ATF3/ATF4/ZFAND1/ZFAND2A/DAXX",5]
["BP","GO:0072001","renal system development","18/368","291/17913",{"v":3.51e-05,"d":"3.51E-05"},0.008657524,0.007728595,"TFAP2B/SOX11/PROM1/NF1/NPNT/CTSH/NOTCH3/SDC1/NFIA/EGR1/SIX1/SOX4/MTSS1/PBX1/MPV17/ACAT1/WNT5A/IRX3",18]
["BP","GO:0051238","sequestering of metal ion","4/368","12/17913",{"v":7.61e-05,"d":"7.61E-05"},0.016073796,0.014349122,"SLC30A8/S100A8/S100A7/SLC30A7",4]
["BP","GO:0071347","cellular response to interleukin-1","12/368","156/17913",{"v":9.36e-05,"d":"9.36E-05"},0.018452923,0.016472976,"PSMD3/NFKBIA/PSMB3/KMO/IL1RN/PSMB8/EGR1/PLCB1/CD47/SQSTM1/PSMA1/TFPI",12]
["BP","GO:0035019","somatic stem cell population maintenance","8/368","72/17913",0.000111874,0.021052711,0.018793813,"KLF4/KIT/ELF5/SOX4/KLF10/PBX1/STAT3/POLR2B",8]
["BP","GO:1901216","positive regulation of neuron death","9/368","93/17913",0.000124487,0.021738305,0.019405845,"TFAP2B/NF1/MCL1/KMO/ATF4/EGR1/NUPR1/DAXX/WNT5A",9]
["BP","GO:0097066","response to thyroid hormone","5/368","25/17913",0.000134834,0.021738305,0.019405845,"KIT/CTSH/SIX1/ANXA2/CTSB",5]
["BP","GO:0070373","negative regulation of ERK1 and ERK2 cascade","8/368","74/17913",0.000135947,0.021738305,0.019405845,"CAMK2N1/LMO3/PTPRC/ATF3/KLF4/ERRFI1/DUSP1/EZR",8]
["BP","GO:0002683","negative regulation of immune system process","22/368","451/17913",0.00017273,0.023836798,0.021279176,"SOX11/PADI2/NF1/PTPRC/MDK/PTPRS/NFKBIA/ERBB2/HLA-E/IRF1/THBS1/GPX1/DUSP1/NLRC5/PLCB1/EZR/CD47/RIOK3/PSMA1/CNOT7/RUNX1/INHA",22]
["BP","GO:0071474","cellular hyperosmotic response","4/368","15/17913",0.000199909,0.025885826,0.023108348,"MAPK10/ERRFI1/EPO/EFHD1",4]
["BP","GO:0097067","cellular response to thyroid hormone stimulus","4/368","16/17913",0.000262243,0.03193194,0.028505732,"KIT/CTSH/SIX1/CTSB",4]
["BP","GO:2001235","positive regulation of apoptotic signaling pathway","12/368","178/17913",0.000322081,0.038097562,0.034009799,"YWHAE/NF1/PTPRC/ATF3/S100A8/MCL1/CTSH/TNFSF10/THBS1/NUPR1/CYLD/TPD52L1",12]
["BP","GO:0001819","positive regulation of cytokine production","21/368","446/17913",0.000387388,0.043345552,0.038694694,"GPRC5B/RNF135/FRMD8/PTPRC/MDK/B2M/HLA-E/IL6ST/ATF4/IRF1/THBS1/EGR1/PLCB1/RIOK3/ANKRD17/CD36/RUNX1/WNT5A/STAT3/HLA-DPA1/HILPDA",21]
["BP","GO:0043618","regulation of transcription from RNA polymerase II promoter in response to stress","9/368","109/17913",0.000414132,0.045053459,0.040219348,"PSMD3/ATF3/PSMB3/ATF4/PSMB8/EGR1/PSMA1/EPO/ATF6",9]
["BP","GO:0002244","hematopoietic progenitor cell differentiation","11/368","158/17913",0.000431868,0.045053459,0.040219348,"TOP2A/PSMD3/PTPRC/PSMB3/KIT/AGPAT5/PSMB8/RBM47/SOX4/PSMA1/RUNX1",11]
["BP","GO:0042035","regulation of cytokine biosynthetic process","9/368","110/17913",0.00044303,0.045053459,0.040219348,"PTPRC/KLF4/IRF1/THBS1/EGR1/ERRFI1/WNT5A/STAT3/INHA",9]
["BP","GO:0046685","response to arsenic-containing substance","5/368","32/17913",0.000454185,0.045053459,0.040219348,"ATF3/ATF4/ZFAND1/ZFAND2A/DAXX",5]
["BP","GO:0043312","neutrophil degranulation","22/368","485/17913",0.000470214,0.045053459,0.040219348,"PADI2/IDH1/PSMD3/PTPRC/RAB3D/S100A8/B2M/ORMDL3/S100P/CTSH/RAP2C/ADAM10/PIGR/SNAP23/GLB1/CD47/CAP1/ANXA2/S100A7/CD36/CTSB/STK11IP",22]
["BP","GO:0007159","leukocyte cell-cell adhesion","17/368","328/17913",0.0004723,0.045053459,0.040219348,"PTPRC/DOCK8/MDK/S100A8/ERBB2/KLF4/HLA-E/IL6ST/IGFBP2/IRF1/NFAT5/EZR/CD47/CYLD/EPO/RUNX1/HLA-DPA1",17]
["BP","GO:0002283","neutrophil activation involved in immune response","22/368","488/17913",0.000510763,0.046990162,0.041948247,"PADI2/IDH1/PSMD3/PTPRC/RAB3D/S100A8/B2M/ORMDL3/S100P/CTSH/RAP2C/ADAM10/PIGR/SNAP23/GLB1/CD47/CAP1/ANXA2/S100A7/CD36/CTSB/STK11IP",22]
["CC","GO:0030666","endocytic vesicle membrane","12/384","161/18678",0.000127857652048695,0.0244451404000871,0.0217409265254186,"HLA-B/HLA-A/B2M/TAPBP/CAMK2D/HLA-E/EPN2/SNAP23/TAP1/CD36/WNT5A/HLA-DPA1",12]
["CC","GO:0042611","MHC protein complex","5/384","25/18678",0.000135425957697864,0.0244451404000871,0.0217409265254186,"HLA-B/HLA-A/B2M/HLA-E/HLA-DPA1",5]
["CC","GO:0098552","side of membrane","19/384","359/18678",0.000173722004498101,0.0244451404000871,0.0217409265254186,"HLA-B/ITGB6/HLA-A/PTPRC/INSR/B2M/ALCAM/TAPBP/KIT/MIEN1/HLA-E/SDC1/THBS1/ERRFI1/EZR/CYLD/CD36/ITGA2B/HLA-DPA1",19]
["CC","GO:0071556","integral component of lumenal side of endoplasmic reticulum membrane","5/384","29/18678",0.000282929865741749,0.0244451404000871,0.0217409265254186,"HLA-B/HLA-A/TAPBP/HLA-E/HLA-DPA1",5]
["CC","GO:0098553","lumenal side of endoplasmic reticulum membrane","5/384","29/18678",0.000282929865741749,0.0244451404000871,0.0217409265254186,"HLA-B/HLA-A/TAPBP/HLA-E/HLA-DPA1",5]
["MF","GO:0042605","peptide antigen binding","6/371","30/16969",{"v":3.99413695608132e-05,"d":"3.99E-05"},0.0189857787210023,0.0180833405046152,"HLA-B/HLA-A/TAPBP/HLA-E/TAP1/HLA-DPA1",6]
["MF","GO:0050786","RAGE receptor binding","4/371","11/16969",{"v":6.56947360588315e-05,"d":"6.57E-05"},0.0189857787210023,0.0180833405046152,"S100A8/S100P/S100A13/S100A7",4]

{"sheet":"C2","index":1,"n_rows":18,"n_cols":10,"rows_kept":18,"flags":["formulas_cached_only"]}
["# Supplementary table 5.2. GO terms of lncRNA subtypes (C2)"]
["Category","ID","Description","GeneRatio","BgRatio","pvalue","p.adjust","qvalue","geneID","Count"]
["BP","GO:2001237","negative regulation of extrinsic apoptotic signaling pathway","10/297","100/17913",{"v":6.26649545100413e-06,"d":"6.27E-06"},0.00991843146788466,0.00887954001207698,"GSTP1/LGALS3/MCL1/AKT1/HSPA1A/GPX1/TNFSF10/HSPA1B/FAIM2/YAP1",10]
["BP","GO:2001236","regulation of extrinsic apoptotic signaling pathway","12/297","151/17913",{"v":8.32803175061577e-06,"d":"8.33E-06"},0.00991843146788466,0.00887954001207698,"GSTP1/LGALS3/ATF3/MCL1/AKT1/HSPA1A/GPX1/TNFSF10/HSPA1B/PMAIP1/FAIM2/YAP1",12]
["BP","GO:0019058","viral life cycle","18/297","324/17913",{"v":8.39359503629167e-06,"d":"8.39E-06"},0.00991843146788466,0.00887954001207698,"CXADR/SLPI/CLDN1/FURIN/LDLR/HSPA1A/SIVA1/CHMP4A/HSPA1B/TMPRSS2/LTF/CXCR4/VPS37B/F11R/PDCD6IP/SETDB1/NPC1/UBAP1",18]
["BP","GO:0046718","viral entry into host cell","10/297","121/17913",{"v":3.37430222686573e-05,"d":"3.37E-05"},0.0285422335258426,0.0255526194285252,"CXADR/CLDN1/LDLR/HSPA1A/SIVA1/HSPA1B/TMPRSS2/CXCR4/F11R/NPC1",10]
["BP","GO:0090559","regulation of membrane permeability","8/297","84/17913",{"v":7.60568116746993e-05,"d":"7.61E-05"},0.0285422335258426,0.0255526194285252,"TP53BP2/HSPA1A/PMAIP1/LAPTM4B/TFDP2/F11R/PDCD6IP/ATF2",8]
["BP","GO:0030260","entry into host cell","10/297","134/17913",{"v":8.05140579008255e-05,"d":"8.05E-05"},0.0285422335258426,0.0255526194285252,"CXADR/CLDN1/LDLR/HSPA1A/SIVA1/HSPA1B/TMPRSS2/CXCR4/F11R/NPC1",10]
["BP","GO:0044409","entry into host","10/297","134/17913",{"v":8.05140579008255e-05,"d":"8.05E-05"},0.0285422335258426,0.0255526194285252,"CXADR/CLDN1/LDLR/HSPA1A/SIVA1/HSPA1B/TMPRSS2/CXCR4/F11R/NPC1",10]
["BP","GO:0051806","entry into cell of other organism involved in symbiotic interaction","10/297","134/17913",{"v":8.05140579008255e-05,"d":"8.05E-05"},0.0285422335258426,0.0255526194285252,"CXADR/CLDN1/LDLR/HSPA1A/SIVA1/HSPA1B/TMPRSS2/CXCR4/F11R/NPC1",10]
["BP","GO:0051828","entry into other organism involved in symbiotic interaction","10/297","134/17913",{"v":8.05140579008255e-05,"d":"8.05E-05"},0.0285422335258426,0.0255526194285252,"CXADR/CLDN1/LDLR/HSPA1A/SIVA1/HSPA1B/TMPRSS2/CXCR4/F11R/NPC1",10]
["BP","GO:0009410","response to xenobiotic stimulus","14/297","270/17913",0.000175360024338755,0.0495512907788565,0.0443611140073498,"GSTP1/TIPARP/CLDN1/RGS2/ACSL1/PPP1R1B/GPX1/EPHX1/NR4A2/MARC1/CBR3/DDIT4/CXCR4/GGT1",14]
["BP","GO:0006631","fatty acid metabolic process","16/297","339/17913",0.000181711362517668,0.0495512907788565,0.0443611140073498,"GSTP1/DEGS1/HSD17B12/ACSL1/GLYATL2/AKT1/CROT/FABP5/GPX1/PDP1/ALOX15B/NR1H3/ECHS1/ALDH3A2/DECR1/GGT1",16]
["MF","GO:0001618","virus receptor activity","9/288","74/16969",{"v":4.34063365159749e-06,"d":"4.34E-06"},0.00109600999702837,0.00100519937194889,"CXADR/CLDN1/LDLR/HSPA1A/SIVA1/HSPA1B/CXCR4/F11R/NPC1",9]
["MF","GO:0104005","hijacked molecular function","9/288","74/16969",{"v":4.34063365159749e-06,"d":"4.34E-06"},0.00109600999702837,0.00100519937194889,"CXADR/CLDN1/LDLR/HSPA1A/SIVA1/HSPA1B/CXCR4/F11R/NPC1",9]
["MF","GO:0001228","DNA-binding transcription activator activity, RNA polymerase II-specific","19/288","390/16969",{"v":4.03235276014706e-05,"d":"4.03E-05"},0.00652899685167131,0.0059880325476506,"HOXA10/TFAP2B/CREB3L4/FOS/BACH1/ATF3/PAX6/CSRNP1/JUNB/HOXA7/NR4A2/EP300/HOXA5/TFDP2/CREBRF/MTF1/IRF4/ATF2/ZNF143",19]
["MF","GO:0000978","RNA polymerase II proximal promoter sequence-specific DNA binding","20/288","432/16969",{"v":5.17148265478916e-05,"d":"5.17E-05"},0.00652899685167131,0.0059880325476506,"HOXA10/NKX3-1/BHLHE40/ZNF217/TOX3/TFAP2B/CREB3L4/PAX6/HOXA9/HOXA7/EP300/HOXA5/IRF7/NR1H3/YAP1/NFIL3/MTF1/IRF4/ATF2/ZNF143",20]
["MF","GO:0019212","phosphatase inhibitor activity","5/288","38/16969",0.000431495052334321,0.0363175002381387,0.0333083900047546,"LGALS3/PPP1R1B/ENSA/PPP1R10/PPP1R1C",5]

{"sheet":"C3","index":2,"n_rows":116,"n_cols":10,"rows_kept":116,"flags":["formulas_cached_only"]}
["# Supplementary table 5.3. GO terms of lncRNA subtypes (C3)"]
["Category","ID","Description","GeneRatio","BgRatio","pvalue","p.adjust","qvalue","geneID","Count"]
["BP","GO:0006401","RNA catabolic process","40/575","368/17913",{"v":1.57556372879752e-11,"d":"1.58E-11"},{"v":6.21087221891982e-08,"d":"6.21E-08"},{"v":5.39008644062309e-08,"d":"5.39E-08"},"RPL7/EIF3E/HBS1L/APEX1/YBX1/PSMD14/CSDE1/LSM1/PSMC5/PPP2R1A/SSB/AGO2/ZHX2/PABPC4/XPO1/RPS12/PSMC4/PSMC2/PSMB1/ANGEL2/NCBP2/CNOT7/HNRNPD/SYNCRIP/PSMA7/ALKBH5/SMG7/LSM6/TARDBP/PSMD13/YTHDF2/YTHDF3/DKC1/MAGOHB/RNASEH1/PSMD2/PARN/OAS2/EXOSC8/MOV10",40]
["BP","GO:0008380","RNA splicing","41/575","440/17913",{"v":1.02175117195962e-09,"d":"1.02E-09"},{"v":1.0069357799662e-06,"d":"1.01E-06"},{"v":8.73866133912829e-07,"d":"8.74E-07"},"HNRNPA3/PUF60/ESRP1/YBX1/MBNL1/IWS1/PQBP1/LSM1/PPP2R1A/HNRNPUL1/PRPF40A/CIR1/NONO/HNRNPK/PPIG/PSIP1/CPSF3/NCBP2/CPSF7/SNRPD2/HNRNPD/SYNCRIP/PLRG1/POLR2D/SF3B3/LSM6/TARDBP/MAGOHB/NOVA1/SF3B5/SF3B1/SNRPG/DHX15/SRSF10/SYF2/CWC22/DDX1/FIP1L1/GEMIN7/USP39/ZNF638",41]
["BP","GO:0070125","mitochondrial translational elongation","17/575","86/17913",{"v":1.64355625932469e-09,"d":"1.64E-09"},{"v":1.07981646237632e-06,"d":"1.08E-06"},{"v":9.37115411018465e-07,"d":"9.37E-07"},"MRPL13/MRPL18/MRPL45/MRPS30/MRPL15/MRPL21/MRPS5/MRPS9/MRPS7/MRPL55/MRPL16/MRPS18C/MRPL49/OXA1L/CHCHD1/MRPS11/MRPL47",17]
["BP","GO:0043487","regulation of RNA stability","23/575","163/17913",{"v":2.50137958608297e-09,"d":"2.50E-09"},{"v":1.16225834638629e-06,"d":"1.16E-06"},{"v":1.00866234766094e-06,"d":"1.01E-06"},"APEX1/YBX1/PSMD14/PSMC5/PABPC4/XPO1/PSMC4/PSMC2/PSMB1/ANGEL2/HNRNPD/SYNCRIP/PSMA7/ALKBH5/TARDBP/PSMD13/YTHDF2/YTHDF3/DKC1/PSMD2/PARN/EXOSC8/MOV10",23]
["BP","GO:0006403","RNA localization","26/575","208/17913",{"v":3.24323739478671e-09,"d":"3.24E-09"},{"v":1.16225834638629e-06,"d":"1.16E-06"},{"v":1.00866234766094e-06,"d":"1.01E-06"},"MRPL18/HNRNPA3/CCT8/IWS1/NUP54/ENY2/FBL/CCT4/SSB/AHCTF1/XPO1/NUP133/NUP62/CPSF3/CCT3/NCBP2/ALKBH5/SMG7/DKC1/RANBP2/MAGOHB/SARNP/PARN/FIP1L1/FYTTD1/NUP35",26]
["BP","GO:0051169","nuclear transport","32/575","305/17913",{"v":4.26502707783093e-09,"d":"4.27E-09"},{"v":1.40106139506746e-06,"d":"1.40E-06"},{"v":1.21590684236408e-06,"d":"1.22E-06"},"KPNA2/IWS1/TP53/NUP54/ENY2/SSB/TRIM28/PSIP1/XPO1/NUP133/BANF1/NUP62/CPSF3/UBR5/ANP32B/NCBP2/SNRPD2/ALKBH5/SMG7/PHB2/TARDBP/RANBP2/MAGOHB/SARNP/SNRPG/XPO6/UHMK1/FIP1L1/GEMIN7/FYTTD1/NUP35/HDAC3",32]
["BP","GO:0140053","mitochondrial gene expression","21/575","148/17913",{"v":1.11805871697983e-08,"d":"1.12E-08"},{"v":3.14813390166749e-06,"d":"3.15E-06"},{"v":2.73209836855973e-06,"d":"2.73E-06"},"MRPL13/MRPL18/MRPL45/FOXO3/MRPS30/MRPL15/MRPL21/MRPS5/MRPS9/SHMT2/MRPS7/MRPL55/MRPL16/MRPS18C/QRSL1/MRPL49/OXA1L/CHCHD1/MRPS11/FASTKD2/MRPL47",21]
["BP","GO:0045333","cellular respiration","22/575","176/17913",{"v":5.27772653563126e-08,"d":"5.28E-08"},{"v":1.15582211130325e-05,"d":"1.16E-05"},{"v":1.00307668074863e-05,"d":"1.00E-05"},"IDH1/CISD1/SDHD/CYC1/NDUFC2/NDUFB9/DLD/NDUFS7/MDH2/PDHA1/NDUFS2/ETFB/SHMT2/FH/NDUFS1/NDUFS8/COX5B/OXA1L/CAT/FASTKD2/POLG2/SUCLG1",22]
["BP","GO:0006611","protein export from nucleus","21/575","163/17913",{"v":6.25644186216129e-08,"d":"6.26E-08"},{"v":1.29804704319157e-05,"d":"1.30E-05"},{"v":1.12650615246672e-05,"d":"1.13E-05"},"IWS1/TP53/NUP54/ENY2/SSB/XPO1/NUP133/NUP62/CPSF3/ANP32B/NCBP2/ALKBH5/SMG7/RANBP2/MAGOHB/SARNP/XPO6/UHMK1/FIP1L1/FYTTD1/NUP35",21]
["BP","GO:0072594","establishment of protein localization to organelle","38/575","452/17913",{"v":6.73865151855871e-08,"d":"6.74E-08"},{"v":1.32818821430792e-05,"d":"1.33E-05"},{"v":1.15266407554294e-05,"d":"1.15E-05"},"RPL7/KPNA2/IDH1/HUWE1/BAG4/CCT8/YWHAQ/GNPAT/TP53/TOMM20/NUP54/CALM3/YWHAG/TRAM1/CCT4/MAPT/TRIM28/PEX13/RPS12/NUP62/UBR5/SAE1/MFF/CCT3/GCC2/YWHAH/SEC63/PHB2/TARDBP/DKC1/RANBP2/CAT/RAB7A/SH3GLB1/ZFAND2B/TFDP1/HDAC3/ACOT8",38]
["BP","GO:0009161","ribonucleoside monophosphate metabolic process","31/575","331/17913",{"v":1.04041600258696e-07,"d":"1.04E-07"},{"v":1.86423631008991e-05,"d":"1.86E-05"},{"v":1.61787177435772e-05,"d":"1.62E-05"},"OLA1/STOML2/TMSB4X/PAICS/CYC1/NDUFC2/NDUFB9/DLD/GUK1/NDUFS7/TP53/ADSS/NUP54/GMPS/ATP6V1A/NDUFS2/SHMT2/PARP1/NDUFS1/NUP133/UMPS/NUP62/PGAM1/NDUFS8/CMPK1/FBP1/COX5B/ATIC/RANBP2/PRPS2/NUP35",31]
["BP","GO:0071166","ribonucleoprotein complex localization","17/575","117/17913",{"v":1.96352128187612e-07,"d":"1.96E-07"},{"v":3.22508370548154e-05,"d":"3.23E-05"},{"v":2.79887902021816e-05,"d":"2.80E-05"},"IWS1/NUP54/ENY2/SSB/XPO1/NUP133/NUP62/CPSF3/NCBP2/ALKBH5/SMG7/RANBP2/MAGOHB/SARNP/FIP1L1/FYTTD1/NUP35",17]
["BP","GO:1902749","regulation of cell cycle G2/M phase transition","22/575","202/17913",{"v":6.03396570367421e-07,"d":"6.03E-07"},{"v":7.92863093462791e-05,"d":"7.93E-05"},{"v":6.88083808313726e-05,"d":"6.88E-05"},"TUBB4B/PSMD14/TP53/SDCCAG8/YWHAG/PSMC5/TUBB/PPP2R1A/RCC2/PSMC4/PSMC2/CDK4/DYNC1I2/PSMB1/PSMA7/BRCC3/PSMD13/MTA3/RAD21/FBXL7/PSMD2/SYF2",22]
["BP","GO:0000209","protein polyubiquitination","27/575","288/17913",{"v":6.80629060482083e-07,"d":"6.81E-07"},{"v":8.65496695619474e-05,"d":"8.65E-05"},{"v":7.5111865757785e-05,"d":"7.51E-05"},"UBE2V2/HUWE1/UBE2W/UBE2E3/RNF19A/PSMD14/PSMC5/RNF114/RNF187/TOPORS/UBE2K/RUSC1/RNF167/PSMC4/PSMC2/UBE2V1/UBR5/PSMB1/PSMA7/RNF20/PSMD13/UBE2R2/UBE2A/UBE3C/TRIP12/FBXL7/PSMD2",27]
["BP","GO:0044839","cell cycle G2/M phase transition","25/575","257/17913",{"v":8.91927356977012e-07,"d":"8.92E-07"},0.000109874301287606,{"v":9.53540759926081e-05,"d":"9.54E-05"},"TUBB4B/PSMD14/TP53/SDCCAG8/TAF2/CALM3/YWHAG/PHLDA1/PSMC5/TUBB/PPP2R1A/RCC2/PSMC4/PSMC2/CDK4/DYNC1I2/PSMB1/PSMA7/BRCC3/PSMD13/MTA3/RAD21/FBXL7/PSMD2/SYF2",25]
["BP","GO:1903829","positive regulation of cellular protein localization","28/575","318/17913",{"v":1.48953204653365e-06,"d":"1.49E-06"},0.000150557316088094,0.000130660705836285,"ZFAND1/HUWE1/CCT8/YWHAQ/TP53/CD2AP/RDX/YWHAG/CCT4/MAPT/PARP1/TRIM28/KIF5B/NUP62/UBR5/SAE1/ANP32B/MFF/CCT3/YWHAH/CNST/RTN4/TARDBP/DKC1/SH3GLB1/ITGB1BP1/TFDP1/HDAC3",28]
["BP","GO:0031647","regulation of protein stability","25/575","272/17913",{"v":2.51709580844373e-06,"d":"2.52E-06"},0.000230753294811283,0.000200258540451459,"HSPD1/CCT8/B4GALT5/CDC73/EFNA1/TP53/DERL1/PFN1/PTGES3/CCT4/ATF7IP/SUMO1/PRKRA/RNF139/CCT3/USP33/RTN4/PHB2/TARDBP/QRSL1/RNF149/SH3GLB1/STX12/HDAC3/GTPBP4",25]
["BP","GO:0034504","protein localization to nucleus","22/575","223/17913",{"v":3.18576476219999e-06,"d":"3.19E-06"},0.000279072993168719,0.00024219264274035,"KPNA2/NVL/CCT8/TP53/CD2AP/NUP54/CCT4/TOPORS/PARP1/TRIM28/SUMO1/XPO1/NUP62/UBR5/CCT3/PLRG1/PHB2/TARDBP/NOL8/DKC1/RANBP2/HDAC3",22]
["BP","GO:0042176","regulation of protein catabolic process","29/575","354/17913",{"v":4.1044334629808e-06,"d":"4.10E-06"},0.000351732102414572,0.000305249628253721,"UBE2V2/TIMP1/UCHL5/EFNA1/RNF19A/PSMD14/CST3/RDX/TIMP3/PDCL3/PSMC5/SNX3/RCHY1/UBE2K/DDB1/SUMO1/XPO1/PSMC4/CSNK2A1/PSMC2/ODC1/RNF139/AZIN1/UBQLN1/SF3B3/LRP2/RAB7A/RELA/PSMD2",29]
["BP","GO:0022613","ribonucleoprotein complex biogenesis","30/575","381/17913",{"v":6.19588161848212e-06,"d":"6.20E-06"},0.000519663092341628,0.000450988023741699,"RPL7/NVL/EIF3E/MPHOSPH6/NOP56/PTGES3/FBL/MAPT/AGO2/EIF3M/PSIP1/XPO1/PA2G4/CNOT7/EIF3D/CPSF7/SNRPD2/NOL8/DKC1/SF3B1/WDR12/FASTKD2/SNRPG/SRSF10/DDX1/CEBPZ/EXOSC8/GEMIN7/USP39/GTPBP4",30]
["BP","GO:0006520","cellular amino acid metabolic process","28/575","347/17913",{"v":7.98488160250199e-06,"d":"7.98E-06"},0.000642375577082915,0.000557483677940525,"GARS/SMS/DLD/PSMD14/CKB/ADSS/GMPS/WARS/PSMC5/PPA2/SLC7A2/SHMT2/DARS/PSMC4/PPM1K/PSMC2/EPRS/ODC1/PSMB1/ENOPH1/PSMA7/AZIN1/QRSL1/PSMD13/ADI1/MARS/ASNSD1/PSMD2",28]
["BP","GO:0050792","regulation of viral process","20/575","204/17913",{"v":9.73469895341373e-06,"d":"9.73E-06"},0.000695441877402497,0.000603537104210558,"IFITM1/KPNA2/IFITM2/IFITM3/NUCKS1/ISG15/BST2/STAU1/SNX3/CFL1/TRIM28/DDB1/BANF1/RSF1/CNOT7/POLR2D/TARDBP/NELFCD/IFIT1/RAB7A",20]
["BP","GO:0034340","response to type I interferon","13/575","95/17913",{"v":1.05027577084513e-05,"d":"1.05E-05"},0.000726348612047632,0.000630359419251463,"IFITM1/IFITM2/IFITM3/IFI6/ISG15/BST2/SHMT2/UBE2K/IRF2/CNOT7/IFIT1/ABCE1/OAS2",13]
["BP","GO:0016569","covalent chromatin modification","32/575","433/17913",{"v":1.12795308940303e-05,"d":"1.13E-05"},0.000766619151452889,0.000665308083586181,"MSL1/HUWE1/HDAC2/CDC73/HIST1H1E/IWS1/TP53/NTMT1/ENY2/FBL/NAA50/ATG5/ATF7IP/TRIM28/DDB1/PHF10/UBR5/PHF20/ARID4B/RSF1/ATRX/RNF20/BRCC3/VEGFA/POLE3/ASH2L/KMT2A/UBE2A/TRIP12/KMT2E/KANSL2/EED",32]
["BP","GO:0060218","hematopoietic stem cell differentiation","12/575","83/17913",{"v":1.29334347842182e-05,"d":"1.29E-05"},0.000864128812193019,0.000749931544133972,"PSMD14/TP53/XRCC5/PSMC5/PSMC4/PSMC2/PSMB1/PSMA7/PSMD13/YTHDF2/KMT2A/PSMD2",12]
["BP","GO:0043624","cellular protein complex disassembly","19/575","195/17913",{"v":1.76472133038059e-05,"d":"1.76E-05"},0.00110421134672386,0.000958286436714608,"MRPL13/MRPL18/MRPL45/RDX/MRPS30/MRPL15/MRPL21/MRPS5/MRPS9/MRPS7/CFL1/MRPL55/MRPL16/MRPS18C/MRPL49/OXA1L/CHCHD1/MRPS11/MRPL47",19]
["BP","GO:0006521","regulation of cellular amino acid metabolic process","10/575","61/17913",{"v":2.21693045014711e-05,"d":"2.22E-05"},0.00132411209613332,0.00114912662886413,"PSMD14/PSMC5/PSMC4/PSMC2/ODC1/PSMB1/PSMA7/AZIN1/PSMD13/PSMD2",10]
["BP","GO:0033044","regulation of chromosome organization","25/575","311/17913",{"v":2.5849907276992e-05,"d":"2.58E-05"},0.00149853433067504,0.00130049843111802,"CCT8/IWS1/TP53/XRCC5/CCT4/MAPT/ATG5/ATF7IP/PARP1/TRIM28/ASF1A/UBR5/ATRX/CCT3/HNRNPD/RNF20/VEGFA/KMT2A/DKC1/RAD21/TRIP12/KMT2E/PARN/EED/NAA10",25]
["BP","GO:0019079","viral genome replication","14/575","120/17913",{"v":3.09176691412278e-05,"d":"3.09E-05"},0.00171658382753127,0.00148973201940683,"IFITM1/IFITM2/IFITM3/NUCKS1/ISG15/BST2/STAU1/ATG5/TRIM28/DDB1/BANF1/CNOT7/LAMTOR5/IFIT1",14]
["BP","GO:0042119","neutrophil activation","34/575","499/17913",{"v":3.26635234116001e-05,"d":"3.27E-05"},0.00175431871477563,0.0015224801257766,"HEBP2/SERPINA3/IDH1/HUWE1/CCT8/RAB31/NDUFC2/BST2/TUBB4B/PSMD14/FABP5/CST3/XRCC5/PSAP/TUBB/PREX1/CAP1/ARPC5/RAP1A/PSMC2/PA2G4/PGAM1/PSMB1/HMOX2/RAB14/PSMD13/CAT/TMEM63A/RAB7A/KMT2E/PSMD2/CTSD/UBR4/GCA",34]
["BP","GO:0016570","histone modification","30/575","420/17913",{"v":4.00103325857018e-05,"d":"4.00E-05"},0.00192342354942483,0.00166923723881297,"MSL1/HUWE1/HDAC2/CDC73/HIST1H1E/IWS1/TP53/NTMT1/ENY2/FBL/NAA50/ATG5/DDB1/PHF10/UBR5/PHF20/ARID4B/RSF1/ATRX/RNF20/BRCC3/VEGFA/POLE3/ASH2L/KMT2A/UBE2A/TRIP12/KMT2E/KANSL2/EED",30]
["BP","GO:0060968","regulation of gene silencing","15/575","139/17913",{"v":4.11029368374459e-05,"d":"4.11E-05"},0.00195214189172544,0.00169416036425744,"ESR1/TP53/NUP54/AGO2/ATF7IP/TRIM28/ASF1A/HIST2H4B/HIST2H4A/NUP133/NUP62/POLR2D/RANBP2/HIST1H4C/NUP35",15]
["BP","GO:0002478","antigen processing and presentation of exogenous peptide antigen","17/575","174/17913",{"v":4.66741055214428e-05,"d":"4.67E-05"},0.00216458028194738,0.00187852437083206,"IFI30/PSMD14/PSMC5/DCTN6/PSMC4/PSMC2/CLTA/DYNC1I2/PSMB1/ARF1/HLA-DRA/PSMA7/PSMD13/RAB7A/SEC31A/PSMD2/CTSD",17]
["BP","GO:0043161","proteasome-mediated ubiquitin-dependent protein catabolic process","25/575","328/17913",{"v":6.20114985356167e-05,"d":"6.20E-05"},0.00273492375624524,0.00237349520889664,"ERLIN2/UBE2V2/UBE2W/UCHL5/PSMD14/CD2AP/DERL1/PSMC5/RNF187/TOPORS/RCHY1/UBE2K/DDB1/SUMO1/PPP2CB/PSMC4/PSMC2/DNAJC10/PSMB1/PSMA7/UBQLN1/PSMD13/FBXL7/PSMD2/ZFAND2B",25]
["BP","GO:0006446","regulation of translational initiation","10/575","69/17913",{"v":6.64209773664241e-05,"d":"6.64E-05"},0.00281539239546714,0.00244332967109087,"EIF3E/EIF5B/AGO2/EIF2AK1/NCBP2/CDC123/YTHDF2/YTHDF3/UHMK1/DDX1",10]
["BP","GO:0002446","neutrophil mediated immunity","33/575","499/17913",{"v":7.59221552521826e-05,"d":"7.59E-05"},0.00315036985267478,0.00273403883179605,"HEBP2/SERPINA3/IDH1/HUWE1/CCT8/RAB31/NDUFC2/BST2/TUBB4B/PSMD14/FABP5/CST3/XRCC5/PSAP/TUBB/CAP1/ARPC5/RAP1A/PSMC2/PA2G4/PGAM1/PSMB1/HMOX2/RAB14/PSMD13/CAT/TMEM63A/RAB7A/KMT2E/PSMD2/CTSD/UBR4/GCA",33]
["BP","GO:0062012","regulation of small molecule metabolic process","30/575","439/17913",{"v":8.94663512379958e-05,"d":"8.95E-05"},0.00359873833245081,0.00312315404429094,"ERLIN2/TMSB4X/TFF3/PSMD14/TP53/FABP5/NUP54/FDPS/PSMC5/PDP1/SHMT2/PARP1/DDB1/PSMC4/NUP133/NUP62/PSMC2/ODC1/PGAM1/PSMB1/PSMA7/AZIN1/FBP1/GGPS1/PSMD13/LPGAT1/RANBP2/INSIG2/PSMD2/NUP35",30]
["BP","GO:0033157","regulation of intracellular protein transport","19/575","220/17913",{"v":9.24372153103058e-05,"d":"9.24E-05"},0.00364387502753226,0.00316232578693152,"ZFAND1/HUWE1/BAG4/IWS1/TP53/NUP54/TRIM28/KIF5B/NUP62/UBR5/SAE1/ANP32B/MFF/GCC2/TARDBP/SH3GLB1/ITGB1BP1/UHMK1/HDAC3",19]
["BP","GO:1902036","regulation of hematopoietic stem cell differentiation","10/575","72/17913",{"v":9.61005543393486e-05,"d":"9.61E-05"},0.00374449012730923,0.00324964429324014,"PSMD14/PSMC5/PSMC4/PSMC2/PSMB1/PSMA7/PSMD13/YTHDF2/KMT2A/PSMD2",10]
["BP","GO:0071826","ribonucleoprotein complex subunit organization","19/575","221/17913",{"v":9.81776071679595e-05,"d":"9.82E-05"},0.00374449012730923,0.00324964429324014,"ZFAND1/EIF3E/PTGES3/MAPT/AGO2/EIF3M/PSIP1/KIF5B/CNOT7/EIF3D/CPSF7/SNRPD2/SF3B1/FASTKD2/SNRPG/SRSF10/DDX1/GEMIN7/USP39",19]
["BP","GO:0032388","positive regulation of intracellular transport","18/575","203/17913",0.000100409819422621,0.00374449012730923,0.00324964429324014,"ZFAND1/HUWE1/TP53/RDX/TRIM28/KIF5B/UBR5/SAE1/ANP32B/MFF/NCBP2/ARF1/SYT1/TARDBP/SH3GLB1/ITGB1BP1/GAB2/HDAC3",18]
["BP","GO:0043312","neutrophil degranulation","32/575","485/17913",0.000101530744831152,0.00374449012730923,0.00324964429324014,"HEBP2/SERPINA3/IDH1/HUWE1/CCT8/RAB31/NDUFC2/BST2/TUBB4B/PSMD14/FABP5/CST3/XRCC5/PSAP/TUBB/CAP1/ARPC5/RAP1A/PSMC2/PA2G4/PGAM1/PSMB1/HMOX2/RAB14/PSMD13/CAT/TMEM63A/RAB7A/PSMD2/CTSD/UBR4/GCA",32]
["BP","GO:0032386","regulation of intracellular transport","28/575","400/17913",0.000101638874587034,0.00374449012730923,0.00324964429324014,"ZFAND1/HUWE1/BAG4/IWS1/TP53/RDX/NUP54/CALM3/SNX3/TRIM28/KIF5B/RAP1A/NUP62/UBR5/SAE1/ANP32B/RNF139/MFF/GCC2/NCBP2/ARF1/SYT1/TARDBP/SH3GLB1/ITGB1BP1/UHMK1/GAB2/HDAC3",28]
["BP","GO:0044766","multi-organism transport","10/575","73/17913",0.000108205659320169,0.00387769735491004,0.00336524777789998,"KPNA2/BST2/NUP54/XPO1/NUP133/NUP62/RANBP2/IFIT1/RAB7A/NUP35",10]
["BP","GO:1902579","multi-organism localization","10/575","73/17913",0.000108205659320169,0.00387769735491004,0.00336524777789998,"KPNA2/BST2/NUP54/XPO1/NUP133/NUP62/RANBP2/IFIT1/RAB7A/NUP35",10]
["BP","GO:0007005","mitochondrion organization","31/575","466/17913",0.00011202415123951,0.00397837120888424,0.00345261727385879,"HEBP2/STOML2/IFI6/CTTN/HUWE1/BAG4/NDUFC2/YWHAQ/NDUFB9/COX20/NDUFS7/TP53/TOMM20/CALM3/YWHAG/NDUFS2/MAPT/PARP1/NDUFS1/PPP2CB/SAE1/MFF/NDUFAF4/YWHAH/NDUFS8/PHB2/TIMMDC1/OXA1L/POLG2/SH3GLB1/TFDP1",31]
["BP","GO:0002283","neutrophil activation involved in immune response","32/575","488/17913",0.000113781243713359,0.00400469341712556,0.00347546092169566,"HEBP2/SERPINA3/IDH1/HUWE1/CCT8/RAB31/NDUFC2/BST2/TUBB4B/PSMD14/FABP5/CST3/XRCC5/PSAP/TUBB/CAP1/ARPC5/RAP1A/PSMC2/PA2G4/PGAM1/PSMB1/HMOX2/RAB14/PSMD13/CAT/TMEM63A/RAB7A/PSMD2/CTSD/UBR4/GCA",32]
["BP","GO:0046390","ribose phosphate biosynthetic process","22/575","284/17913",0.000133674806324727,0.0043736554219809,0.0037956634680333,"STOML2/TMSB4X/PAICS/DLD/GUK1/TP53/ADSS/NUP54/PDHA1/GMPS/PDP1/PARP1/NUP133/UMPS/NUP62/PGAM1/CMPK1/FBP1/ATIC/RANBP2/PRPS2/NUP35",22]
["BP","GO:0061418","regulation of transcription from RNA polymerase II promoter in response to hypoxia","10/575","77/17913",0.000170348161820088,0.00545945084467306,0.0047379677014573,"PSMD14/TP53/PSMC5/PSMC4/PSMC2/PSMB1/PSMA7/VEGFA/PSMD13/PSMD2",10]
["BP","GO:0042178","xenobiotic catabolic process","4/575","10/17913",0.000189092555739156,0.00583603043119299,0.00506478114272136,"GSTM1/GSTM3/PON3/GSTM2",4]
["BP","GO:0010257","NADH dehydrogenase complex assembly","9/575","64/17913",0.000193942157911284,0.00583603043119299,0.00506478114272136,"NDUFC2/NDUFB9/NDUFS7/NDUFS2/NDUFS1/NDUFAF4/NDUFS8/TIMMDC1/OXA1L",9]
["BP","GO:0032981","mitochondrial respiratory chain complex I assembly","9/575","64/17913",0.000193942157911284,0.00583603043119299,0.00506478114272136,"NDUFC2/NDUFB9/NDUFS7/NDUFS2/NDUFS1/NDUFAF4/NDUFS8/TIMMDC1/OXA1L",9]
["BP","GO:1904872","regulation of telomerase RNA localization to Cajal body","5/575","18/17913",0.000202750527647828,0.00600934270667471,0.00521518967040316,"CCT8/CCT4/CCT3/DKC1/PARN",5]
["BP","GO:0031503","protein-containing complex localization","19/575","238/17913",0.000257160962002914,0.00745388611923153,0.00646883224852532,"IWS1/NUP54/ENY2/SSB/RCC2/XPO1/NUP133/RAP1A/NUP62/CPSF3/NCBP2/ALKBH5/SMG7/RANBP2/MAGOHB/SARNP/FIP1L1/FYTTD1/NUP35",19]
["BP","GO:0090685","RNA localization to nucleus","5/575","19/17913",0.000267934819323651,0.00754427898409881,0.00654727941956291,"CCT8/CCT4/CCT3/DKC1/PARN",5]
["BP","GO:0032200","telomere organization","15/575","167/17913",0.00032448452700498,0.00858468460035994,0.00745019224843649,"CCT8/APEX1/XRCC5/PTGES3/CCT4/PARP1/HIST2H4B/HIST2H4A/ATRX/CCT3/HNRNPD/POLE3/DKC1/HIST1H4C/PARN",15]
["BP","GO:0022618","ribonucleoprotein complex assembly","17/575","209/17913",0.000430685844759555,0.0104157276076206,0.00903925731655508,"EIF3E/PTGES3/MAPT/AGO2/EIF3M/PSIP1/CNOT7/EIF3D/CPSF7/SNRPD2/SF3B1/FASTKD2/SNRPG/SRSF10/DDX1/GEMIN7/USP39",17]
["BP","GO:0075733","intracellular transport of virus","8/575","57/17913",0.000443602158367396,0.0105980588380865,0.00919749291670836,"KPNA2/BST2/NUP54/XPO1/NUP133/NUP62/RANBP2/NUP35",8]
["BP","GO:0009408","response to heat","14/575","158/17913",0.000582215250078951,0.012750513976729,0.0110654945190444,"HSPB8/BAG4/HDAC2/NUP54/DNAJB4/PTGES3/MAPT/SUMO1/PSIP1/NUP133/NUP62/RANBP2/EIF2B4/NUP35",14]
["BP","GO:0010565","regulation of cellular ketone metabolic process","15/575","178/17913",0.000637973175190917,0.0133309367868269,0.0115692126778252,"ERLIN2/PSMD14/FABP5/PSMC5/PDP1/PSMC4/PSMC2/ODC1/PSMB1/PSMA7/AZIN1/PSMD13/LPGAT1/INSIG2/PSMD2",15]
["BP","GO:0010288","response to lead ion","5/575","23/17913",0.000697198850324203,0.0142401962071399,0.0123583106820489,"MAPT/PPP2CB/CDK4/SPARC/CAT",5]
["BP","GO:0042537","benzene-containing compound metabolic process","5/575","23/17913",0.000697198850324203,0.0142401962071399,0.0123583106820489,"GSTM1/GSTM3/CYP4B1/PON3/GSTM2",5]
["BP","GO:0050852","T cell receptor signaling pathway","15/575","180/17913",0.000716479134485696,0.0145585605574362,0.012634602208782,"STOML2/PHPT1/PSMD14/PSMC5/DENND1B/PDE4B/PSMC4/PSMC2/PSMB1/HLA-DRA/PSMA7/PSMD13/RELA/PSMD2/EIF2B4",15]
["BP","GO:0031334","positive regulation of protein complex assembly","18/575","239/17913",0.000738597923331649,0.0149310410962736,0.012957858304064,"ESR1/CTTN/BAG4/TP53/PFN1/WARS/MAPT/PARP1/DDB1/ARPC5/SUMO1/ARF1/VEGFA/NCKAP1/ERCC3/SH3GLB1/ACTR3/ARPC2",18]
["BP","GO:0009615","response to virus","22/575","323/17913",0.00078865451287832,0.0157810969023672,0.013695576632939,"IFITM1/IFITM2/IFITM3/IFI6/ISG15/BST2/PQBP1/HNRNPUL1/CFL1/ANKRD17/IRF2/BANF1/PRKRA/ODC1/CNOT7/ARF1/LAMTOR5/IFIT1/RELA/ABCE1/OAS2/DDX1",22]
["BP","GO:0016999","antibiotic metabolic process","12/575","130/17913",0.000984926612917417,0.0184008564365899,0.0159691269243283,"IDH1/SDHD/DLD/MDH2/PDHA1/FH/CYP4B1/ESD/CAT/ADH5/SUCLG1/NAGK",12]
["BP","GO:0045930","negative regulation of mitotic cell cycle","21/575","308/17913",0.00101512652131172,0.018786989422586,0.0163042312540801,"CDC73/PSMD14/TP53/PSMC5/PSMC4/HECA/PSMC2/CDK4/ATRX/PSMB1/ANGEL2/CNOT7/PSMA7/PSMD13/RAD21/FBXL7/PSMD2/SYF2/TFDP1/NAA10/MAGI2",21]
["BP","GO:1900739","regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway","5/575","25/17913",0.00104402683791411,0.0191421106746858,0.0166124221455122,"YWHAQ/TP53/YWHAG/YWHAH/TFDP1",5]
["BP","GO:1900740","positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway","5/575","25/17913",0.00104402683791411,0.0191421106746858,0.0166124221455122,"YWHAQ/TP53/YWHAG/YWHAH/TFDP1",5]
["BP","GO:0009895","negative regulation of catabolic process","20/575","288/17913",0.00106130295874778,0.0192795219510772,0.0167316741010443,"TIMP1/UCHL5/EFNA1/YBX1/TP53/CST3/TIMP3/PDCL3/SNX3/CSNK2A1/ANGEL2/HNRNPD/SYNCRIP/AZIN1/FBP1/SF3B3/TARDBP/DKC1/RELA/PARN",20]
["BP","GO:0065004","protein-DNA complex assembly","16/575","210/17913",0.00126320353040572,0.0219363361976183,0.0190373822110763,"ESR1/TSPYL5/HIST1H1E/TP53/ATF7IP/PARP1/GMNN/DDB1/ASF1A/HIST2H4B/HIST2H4A/ANP32B/RSF1/ATRX/HIST1H4C/ERCC3",16]
["BP","GO:0019080","viral gene expression","15/575","191/17913",0.00131065441284037,0.0224634769365945,0.0194948596875569,"RPL7/IFITM3/NUCKS1/NUP54/SSB/RPS12/NUP133/NUP62/RSF1/EIF3D/POLR2D/TARDBP/NELFCD/RANBP2/NUP35",15]
["BP","GO:0035456","response to interferon-beta","5/575","27/17913",0.00150464086203931,0.0251326028735549,0.0218112524604271,"IFITM1/IFITM2/IFITM3/BST2/UBE2K",5]
["BP","GO:0000045","autophagosome assembly","8/575","70/17913",0.00176172608183102,0.0285791119941477,0.0248022948492563,"ATG5/UBQLN1/RAB33B/WDR45/WIPI1/RAB7A/SH3GLB1/STX12",8]
["BP","GO:0043462","regulation of ATPase activity","8/575","72/17913",0.00211248391363708,0.0324023797181221,0.0281203060385849,"TMSB4X/PFN1/DNAJB4/CNN3/SUMO1/RAB4A/DNAJC10/OXA1L",8]
["BP","GO:1904951","positive regulation of establishment of protein localization","26/575","440/17913",0.00217622719307485,0.0331223459270312,0.0287451265088123,"ZFAND1/PHPT1/HUWE1/CCT8/YWHAQ/TP53/CD2AP/YWHAG/CCT4/TRIM28/KIF5B/UBR5/SAE1/ANP32B/MFF/CCT3/YWHAH/ARF1/CNST/TARDBP/DKC1/SH3GLB1/ITGB1BP1/TFDP1/SYTL4/HDAC3",26]
["BP","GO:1905037","autophagosome organization","8/575","73/17913",0.00230729748465056,0.034715140017147,0.0301274279835851,"ATG5/UBQLN1/RAB33B/WDR45/WIPI1/RAB7A/SH3GLB1/STX12",8]
["BP","GO:0060071","Wnt signaling pathway, planar cell polarity pathway","10/575","107/17913",0.00231914814442939,0.0347607680050975,0.030167026093238,"PSMD14/PFN1/PSMC5/PSMC4/PSMC2/PSMB1/PSMA7/PSMD13/PSMD2/MAGI2",10]
["BP","GO:0051196","regulation of coenzyme metabolic process","9/575","90/17913",0.00238425425579469,0.0354669067031798,0.0307798464005272,"TP53/NUP54/PDP1/NUP133/NUP62/PGAM1/FBP1/RANBP2/NUP35",9]
["BP","GO:0034314","Arp2/3 complex-mediated actin nucleation","5/575","30/17913",0.00245382559322168,0.0363645883025558,0.0315588966282962,"ARPC5/ARF1/NCKAP1/ACTR3/ARPC2",5]
["BP","GO:0035567","non-canonical Wnt signaling pathway","12/575","145/17913",0.00250675617649122,0.0369760610048876,0.032089561340993,"PSMD14/PFN1/PSMC5/AGO2/PSMC4/PSMC2/PSMB1/PSMA7/PSMD13/PSMD2/MOV10/MAGI2",12]
["BP","GO:0072524","pyridine-containing compound metabolic process","14/575","184/17913",0.00251384686689748,0.0369760610048876,0.032089561340993,"IDH1/DLD/TP53/MDH2/NUP54/PDHA1/TALDO1/NUP133/NUP62/PGAM1/FBP1/RANBP2/RPE/NUP35",14]
["BP","GO:0006110","regulation of glycolytic process","8/575","75/17913",0.00273902501475854,0.0394059730225481,0.0341983530463514,"TP53/NUP54/NUP133/NUP62/PGAM1/FBP1/RANBP2/NUP35",8]
["BP","GO:0002576","platelet degranulation","11/575","128/17913",0.00278775820714726,0.0396437910038365,0.0344047426533335,"OLA1/SERPINA3/TIMP1/TMSB4X/TIMP3/PSAP/TAGLN2/VEGFA/SPARC/SYTL4/ANXA5",11]
["BP","GO:0035690","cellular response to drug","22/575","362/17913",0.00330560031827428,0.044431227059376,0.0385595043774125,"ADIRF/HDAC2/APEX1/TP53/CST3/FOXO3/PSAP/PDE4B/UMPS/RAP1A/CDK4/ATRX/HNRNPD/SLC31A1/FBP1/TFRC/RNF149/CTNNA1/KMT2A/RELA/GSTM2/RGS10",22]
["BP","GO:0070601","centromeric sister chromatid cohesion","3/575","10/17913",0.00333532242753463,0.044431227059376,0.0385595043774125,"PPP2R1A/NAA50/NAA10",3]
["BP","GO:0006733","oxidoreduction coenzyme metabolic process","14/575","192/17913",0.00369687444454636,0.048739394850842,0.0422983346057936,"IDH1/DLD/TP53/MDH2/NUP54/PDHA1/TALDO1/NUP133/NUP62/PGAM1/FBP1/RANBP2/RPE/NUP35",14]
["CC","GO:0005759","mitochondrial matrix","42/590","448/18678",{"v":3.32617230017455e-10,"d":"3.33E-10"},{"v":1.74956662989181e-07,"d":"1.75E-07"},{"v":1.38648866407276e-07,"d":"1.39E-07"},"GARS/HSPD1/MRPL13/MRPL18/MRPL45/DLD/FLAD1/NDUFS7/TP53/MDH2/FOXO3/PDHA1/MRPS30/MRPL15/MRPL21/MRPS5/MRPS9/NDUFS2/ETFB/PPA2/PDP1/SHMT2/MRPS7/FH/ACADM/MRPL55/NDUFS1/PPM1K/MRPL16/MRPS18C/NDUFS8/GRSF1/MRPL49/OXA1L/CHCHD1/MRPS11/FASTKD2/POLG2/MRPL47/ABCE1/SUCLG1/ETHE1",42]
["CC","GO:0000502","proteasome complex","13/590","61/18678",{"v":4.46205242429516e-08,"d":"4.46E-08"},{"v":4.09177346674797e-06,"d":"4.09E-06"},{"v":3.24263016376265e-06,"d":"3.24E-06"},"UCHL5/PSMD14/PSMC5/PSMC4/PSMC2/PSMB1/PSMA7/UBQLN1/PSMD13/ADRM1/UBE3C/PSMD2/ZFAND2B",13]
["CC","GO:1905368","peptidase complex","14/590","72/18678",{"v":4.66742220541594e-08,"d":"4.67E-08"},{"v":4.09177346674797e-06,"d":"4.09E-06"},{"v":3.24263016376265e-06,"d":"3.24E-06"},"UCHL5/PSMD14/ENY2/PSMC5/PSMC4/PSMC2/PSMB1/PSMA7/UBQLN1/PSMD13/ADRM1/UBE3C/PSMD2/ZFAND2B",14]
["CC","GO:1905369","endopeptidase complex","13/590","62/18678",{"v":5.48469526823467e-08,"d":"5.48E-08"},{"v":4.12135673013062e-06,"d":"4.12E-06"},{"v":3.26607417476831e-06,"d":"3.27E-06"},"UCHL5/PSMD14/PSMC5/PSMC4/PSMC2/PSMB1/PSMA7/UBQLN1/PSMD13/ADRM1/UBE3C/PSMD2/ZFAND2B",13]
["CC","GO:0005743","mitochondrial inner membrane","36/590","445/18678",{"v":2.65911520067547e-07,"d":"2.66E-07"},{"v":1.74836824444412e-05,"d":"1.75E-05"},{"v":1.38553897298353e-05,"d":"1.39E-05"},"STOML2/HSPD1/IFI6/MRPL13/MRPL18/MRPL45/SDHD/CYC1/NDUFC2/NDUFB9/COX20/NDUFS7/MRPS30/GHITM/MRPL15/MRPL21/MRPS5/MRPS9/NDUFS2/SHMT2/MRPS7/MRPL55/NDUFS1/MRPL16/NDUFAF4/MRPS18C/NDUFS8/PHB2/TIMMDC1/TIMM8A/COX5B/MRPL49/OXA1L/CHCHD1/MRPS11/MRPL47",36]
["CC","GO:0016607","nuclear speck","32/590","386/18678",{"v":7.24289359577274e-07,"d":"7.24E-07"},{"v":3.80976203137646e-05,"d":"3.81E-05"},{"v":3.01914301465895e-05,"d":"3.02E-05"},"APEX1/PQBP1/FIBP/PNISR/PRPF40A/MBD4/MAPT/TOPORS/CIR1/DENND1B/NONO/ACADM/RCHY1/PPIG/SUMO1/NSL1/CNOT7/PLRG1/ALKBH5/POLR2D/TARDBP/SF3B1/SARNP/TRIP12/KMT2E/DHX15/SRSF10/SYF2/CWC22/FYTTD1/COPS4/ZNF638",32]
["CC","GO:0034774","secretory granule lumen","27/590","321/18678",{"v":4.06778291904491e-06,"d":"4.07E-06"},0.000143241846437602,0.000113515651769642,"OLA1/HEBP2/SERPINA3/IDH1/TIMP1/TMSB4X/HUWE1/CCT8/TUBB4B/PSMD14/FABP5/TIMP3/XRCC5/TUBB/CAP1/ARPC5/PSMC2/PA2G4/PGAM1/PSMB1/VEGFA/PSMD13/SPARC/CAT/PSMD2/CTSD/GCA",27]
["CC","GO:0000785","chromatin","36/590","500/18678",{"v":4.0848435295894e-06,"d":"4.08E-06"},0.000143241846437602,0.000113515651769642,"ESR1/COPS5/UCHL5/EIF3E/HDAC2/NUCKS1/HIST1H1E/H2AFZ/TP53/AHCTF1/HMGN3/TMPO/TRIM28/HNRNPK/ANKRD17/ASF1A/HIST2H4B/SMARCA2/PHF10/PSIP1/HIST2H4A/CSNK2A1/CDK4/RSF1/ATRX/RNF20/TARDBP/H2AFV/ASH2L/MTA3/UBE2A/RAD21/KMT2E/HIST1H4C/RELA/EED",36]
["CC","GO:0005689","U12-type spliceosomal complex","7/590","24/18678",{"v":6.56126605626708e-06,"d":"6.56E-06"},0.00020301329091744,0.000160883056240357,"YBX1/SNRPD2/SF3B3/SF3B5/SF3B1/SNRPG/DHX15",7]
["CC","GO:0031983","vesicle lumen","27/590","339/18678",{"v":1.10942054612009e-05,"d":"1.11E-05"},0.000277883432028175,0.000220215807650905,"OLA1/HEBP2/SERPINA3/IDH1/TIMP1/TMSB4X/HUWE1/CCT8/TUBB4B/PSMD14/FABP5/TIMP3/XRCC5/TUBB/CAP1/ARPC5/PSMC2/PA2G4/PGAM1/PSMB1/VEGFA/PSMD13/SPARC/CAT/PSMD2/CTSD/GCA",27]
["CC","GO:0101031","chaperone complex","6/590","19/18678",{"v":1.84911610369351e-05,"d":"1.85E-05"},0.00044210685024672,0.000350358840699822,"HSPB8/CCT8/PTGES3/CCT4/CCT3/STIP1",6]
["CC","GO:0044215","other organism","10/590","75/18678",0.000119775128626102,0.00217247302266655,0.00172163161291966,"KPNA2/C4B/NUP54/XPO1/NUP133/NUP62/CNOT7/RANBP2/IFIT1/NUP35",10]
["CC","GO:0044216","other organism cell","10/590","75/18678",0.000119775128626102,0.00217247302266655,0.00172163161291966,"KPNA2/C4B/NUP54/XPO1/NUP133/NUP62/CNOT7/RANBP2/IFIT1/NUP35",10]
["CC","GO:0044217","other organism part","10/590","75/18678",0.000119775128626102,0.00217247302266655,0.00172163161291966,"KPNA2/C4B/NUP54/XPO1/NUP133/NUP62/CNOT7/RANBP2/IFIT1/NUP35",10]
["CC","GO:0000407","phagophore assembly site","5/590","24/18678",0.000798151436517919,0.00954153762746421,0.00756143466174871,"ATG5/WDR45/WIPI1/RAB7A/STX12",5]
["CC","GO:0031248","protein acetyltransferase complex","9/590","80/18678",0.000928521078641512,0.0106174366818573,0.00841405828700317,"MSL1/TAF2/ENY2/NAA50/PHF20/POLE3/KANSL2/NAA38/NAA10",9]
["CC","GO:1902493","acetyltransferase complex","9/590","80/18678",0.000928521078641512,0.0106174366818573,0.00841405828700317,"MSL1/TAF2/ENY2/NAA50/PHF20/POLE3/KANSL2/NAA38/NAA10",9]
["CC","GO:0005925","focal adhesion","24/590","397/18678",0.00192804751937802,0.0195029422152469,0.0154556035966335,"RPL7/CTTN/YWHAQ/RDX/PFN1/YWHAG/CNN3/CFL1/CAP1/RALA/HNRNPK/ARPC5/IRF2/LAP3/RSU1/TES/ARF1/USP33/CTNNA1/NCKAP1/CAT/ACTR3/ARPC2/ANXA5",24]
["CC","GO:0030055","cell-substrate junction","24/590","404/18678",0.00242054271115386,0.0223369380011742,0.0177014757823994,"RPL7/CTTN/YWHAQ/RDX/PFN1/YWHAG/CNN3/CFL1/CAP1/RALA/HNRNPK/ARPC5/IRF2/LAP3/RSU1/TES/ARF1/USP33/CTNNA1/NCKAP1/CAT/ACTR3/ARPC2/ANXA5",24]
["CC","GO:1990204","oxidoreductase complex","9/590","93/18678",0.0026850454236212,0.0243505843590474,0.0192972411570598,"SDHD/NDUFC2/NDUFB9/DLD/NDUFS7/PDHA1/NDUFS2/NDUFS1/NDUFS8",9]
["CC","GO:0005885","Arp2/3 protein complex","3/590","10/18678",0.00318733142306033,0.0279422721421623,0.0221435656759981,"ARPC5/ACTR3/ARPC2",3]
["CC","GO:0070469","respiratory chain","8/590","88/18678",0.00663486729573581,0.0491540872895357,0.0389534091788196,"SDHD/NDUFC2/NDUFB9/NDUFS7/NDUFS2/NDUFS1/NDUFS8/OXA1L",8]
["MF","GO:0045296","cadherin binding","30/581","297/16969",{"v":1.25885676314367e-07,"d":"1.26E-07"},{"v":4.31731794595313e-05,"d":"4.32E-05"},{"v":3.80896978025217e-05,"d":"3.81E-05"},"OLA1/IDH1/CTTN/EEF1D/PAICS/EIF3E/CCT8/PUF60/NOP56/CD2AP/EPN2/RDX/NDRG1/FNBP1L/PFN1/ASAP1/PCMT1/CNN3/TMPO/HNRNPK/TXNDC9/KIF5B/ZC3H15/TAGLN2/TES/RTN4/UBAP2/CTNNA1/ATIC/SH3GLB1",30]
["MF","GO:0003725","double-stranded RNA binding","13/581","62/16969",{"v":1.38375575190805e-07,"d":"1.38E-07"},{"v":4.31731794595313e-05,"d":"4.32E-05"},{"v":3.80896978025217e-05,"d":"3.81E-05"},"HSPD1/TUBB4B/MBNL1/STAU2/STAU1/AGO2/EIF4A1/PRKRA/TFRC/MTDH/DHX15/OAS2/DDX1",13]
["MF","GO:0031625","ubiquitin protein ligase binding","22/581","270/16969",0.000160273366960161,0.0166684301638568,0.0147057843719587,"HSPD1/ERLIN2/CACYBP/UBE2W/BAG4/TP53/CKB/DERL1/XRCC5/TUBB/NDUFS2/RALA/TRIM28/UBE2K/SUMO1/GABARAP/PA2G4/TANK/RNF20/RTN4/UBE2A/RELA",22]
["MF","GO:0051059","NF-kappaB binding","6/581","29/16969",0.00038054963159417,0.0296828712643453,0.0261878233320725,"HDAC2/APEX1/COMMD7/MTDH/RELA/HDAC3",6]
["MF","GO:0070628","proteasome binding","4/581","12/16969",0.000540611749070429,0.0374824146022164,0.033068999387583,"ZFAND1/UCHL5/PSMD14/ADRM1",4]

{"sheet":"C4","index":3,"n_rows":39,"n_cols":10,"rows_kept":39,"flags":["formulas_cached_only"]}
["# Supplementary table 5.4. GO terms of lncRNA subtypes (C4)"]
["Category","ID","Description","GeneRatio","BgRatio","pvalue","p.adjust","qvalue","geneID","Count"]
["BP","GO:0070972","protein localization to endoplasmic reticulum","15/372","128/17913",{"v":6.84238395727076e-08,"d":"6.84E-08"},0.00019972639288709,0.000178554208411898,"RPL19/MIA3/RPL27/RPL41/RPL3/RPL18A/RPL14/RPS23/RPS3/UBA52/RPS13/RPS26/RPL24/RPL15/PPP1R15A",15]
["BP","GO:0000184","nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","14/372","118/17913",{"v":1.60694184935998e-07,"d":"1.61E-07"},0.00019972639288709,0.000178554208411898,"RPL19/RPL27/RPL41/RPL3/CASC3/RPL18A/RPL14/RPS23/RPS3/UBA52/RPS13/RPS26/RPL24/RPL15",14]
["BP","GO:0019083","viral transcription","17/372","177/17913",{"v":1.75634118249199e-07,"d":"1.76E-07"},0.00019972639288709,0.000178554208411898,"RPL19/RPL27/RPL41/RPL3/RPL18A/IFITM3/NUP54/RPL14/HMGA2/RPS23/RPS3/NUP93/UBA52/RPS13/RPS26/RPL24/RPL15",17]
["BP","GO:0006614","SRP-dependent cotranslational protein targeting to membrane","13/372","103/17913",{"v":2.14863901174811e-07,"d":"2.15E-07"},0.00019972639288709,0.000178554208411898,"RPL19/RPL27/RPL41/RPL3/RPL18A/RPL14/RPS23/RPS3/UBA52/RPS13/RPS26/RPL24/RPL15",13]
["BP","GO:0006413","translational initiation","17/372","183/17913",{"v":2.83955223343899e-07,"d":"2.84E-07"},0.00019972639288709,0.000178554208411898,"RPL19/RPL27/RPL41/RPL3/RPL18A/RPL14/TNF/RPS23/RPS3/AGO2/UBA52/EIF3K/RPS13/RPS26/RPL24/RPL15/PPP1R15A",17]
["BP","GO:0006613","cotranslational protein targeting to membrane","13/372","106/17913",{"v":3.02005634405882e-07,"d":"3.02E-07"},0.00019972639288709,0.000178554208411898,"RPL19/RPL27/RPL41/RPL3/RPL18A/RPL14/RPS23/RPS3/UBA52/RPS13/RPS26/RPL24/RPL15",13]
["BP","GO:0019080","viral gene expression","17/372","191/17913",{"v":5.22410684453077e-07,"d":"5.22E-07"},0.000254122101001671,0.000227183648232076,"RPL19/RPL27/RPL41/RPL3/RPL18A/IFITM3/NUP54/RPL14/HMGA2/RPS23/RPS3/NUP93/UBA52/RPS13/RPS26/RPL24/RPL15",17]
["BP","GO:1903706","regulation of hemopoiesis","26/372","468/17913",{"v":5.73452492913505e-06,"d":"5.73E-06"},0.00189621624323399,0.00169520605361273,"GATA3/CIB1/MED1/MYC/ANXA1/FOS/HSPA1B/HIST2H4B/HIST2H4A/MITF/SOD1/PSMB8/TNF/ISG15/PSMB9/PSMA5/SMAP1/MEIS1/MDK/BTN2A2/ITCH/TMEM176A/STAT1/LIF/NFKBIZ/CA2",26]
["BP","GO:0034612","response to tumor necrosis factor","19/372","284/17913",{"v":8.23438542412598e-06,"d":"8.23E-06"},0.00242159763673912,0.00216489389744558,"GATA3/CIB1/UBD/NR1D1/HSPA1B/ADAM9/PSMB8/GBP1/GSTP1/TNF/RPS3/PSMB9/TXNDC17/PSMA5/NKX3-1/TANK/RORA/STAT1/RNF31",19]
["BP","GO:0071356","cellular response to tumor necrosis factor","17/372","266/17913",{"v":4.38546695085981e-05,"d":"4.39E-05"},0.00828644421952938,0.00740803189192859,"GATA3/CIB1/NR1D1/HSPA1B/PSMB8/GBP1/GSTP1/TNF/RPS3/PSMB9/TXNDC17/PSMA5/NKX3-1/TANK/RORA/STAT1/RNF31",17]
["BP","GO:0045785","positive regulation of cell adhesion","21/372","388/17913",{"v":6.65273117671414e-05,"d":"6.65E-05"},0.011999107867819,0.0107271311318309,"GATA3/CEACAM6/CIB1/MYO10/AGR2/ANXA1/FLOT2/HSD17B12/CD44/MAP4K4/ADAM9/ANK3/PLEKHA2/PPP3CA/TNF/RPS3/SOX2/MDK/BTN2A2/NFKBIZ/PTAFR",21]
["BP","GO:0002683","negative regulation of immune system process","23/372","451/17913",{"v":7.47847744905477e-05,"d":"7.48E-05"},0.0129019993555867,0.0115343107566657,"CIB1/MYC/ANXA1/NR1D1/MIA3/HIST2H4B/HIST2H4A/BST2/GBP1/TNF/PLCB1/NLRC5/CD59/SEC14L1/LDLR/HLA-F/MEIS1/MDK/BTN2A2/ITCH/TMEM176A/BMP5/CD200R1",23]
["BP","GO:0060337","type I interferon signaling pathway","9/372","91/17913",0.000114118777032823,0.0174162810487015,0.015570051765207,"HLA-A/IFI27/IFITM3/BST2/PSMB8/ISG15/NLRC5/HLA-F/STAT1",9]
["BP","GO:0071357","cellular response to type I interferon","9/372","91/17913",0.000114118777032823,0.0174162810487015,0.015570051765207,"HLA-A/IFI27/IFITM3/BST2/PSMB8/ISG15/NLRC5/HLA-F/STAT1",9]
["BP","GO:0098869","cellular oxidant detoxification","9/372","99/17913",0.000217968008000913,0.0298240364050904,0.0266625113235236,"PXDN/GSTK1/SOD1/GSTP1/NXN/GSTA1/TNF/MGST1/TXNDC17",9]
["BP","GO:0032922","circadian regulation of gene expression","7/372","61/17913",0.000261848996084514,0.0333571083771999,0.0298210566721041,"BHLHE41/BHLHE40/NR1D1/AHR/KDM5A/GFPT1/RORA",7]
["BP","GO:0007249","I-kappaB kinase/NF-kappaB signaling","15/372","253/17913",0.000277415467854737,0.0333571083771999,0.0298210566721041,"UBD/NR1D1/BST2/GSTP1/TMED4/TNF/UBA52/PLK2/TANK/RORA/STAT1/ROCK2/GOLT1B/TRAF3IP2/RNF31",15]
["BP","GO:0071675","regulation of mononuclear cell migration","6/372","45/17913",0.000316588825935032,0.0363299540696281,0.0324787630556682,"CXCL17/TNF/PLCB1/MDK/BMP5/CXCL10",6]
["BP","GO:1903531","negative regulation of secretion by cell","13/372","202/17913",0.00032045070373916,0.0363299540696281,0.0324787630556682,"IDH2/RAB11FIP1/ANXA1/MAP4K4/GBP1/PPP3CA/TNF/HLA-F/BTN2A2/LIF/STXBP6/CD200R1/SRGN",13]
["BP","GO:0048545","response to steroid hormone","19/372","375/17913",0.00033924440748305,0.0373922724692428,0.0334284693923356,"MED1/ANXA1/FOS/NR1D1/RPL27/SPP1/AREG/ADAM9/GSTP1/TNF/TFPI/NKX3-1/KRAS/LMO3/MDK/RORA/UFL1/PTAFR/CA2",19]
["BP","GO:0030099","myeloid cell differentiation","20/372","411/17913",0.000401050712437041,0.0416633633711615,0.0372467992786541,"GATA3/CIB1/MED1/MYC/UBD/FOS/HSPA1B/HIST2H4B/HIST2H4A/MITF/TNF/ISG15/SMAP1/MT1G/MEIS1/LBR/RBPJ/STAT1/LIF/CA2",20]
["BP","GO:0071674","mononuclear cell migration","7/372","68/17913",0.00051398106196363,0.0497433378993093,0.0444702484933872,"CXCL17/ANXA1/TNF/PLCB1/MDK/BMP5/CXCL10",7]
["CC","GO:0022626","cytosolic ribosome","13/374","95/18678",{"v":5.35761968238813e-08,"d":"5.36E-08"},{"v":2.46450505389854e-05,"d":"2.46E-05"},{"v":2.04153507897316e-05,"d":"2.04E-05"},"RPL19/RPL27/RPL41/RPL3/RPL18A/RPL14/RPS23/RPS3/UBA52/RPS13/RPS26/RPL24/RPL15",13]
["CC","GO:0005844","polysome","9/374","60/18678",{"v":2.82193706459467e-06,"d":"2.82E-06"},0.000432697016571182,0.000358435514871323,"RPL19/RPL41/RPL18A/RPS23/RPS3/AGO2/RPS26/RPL24/LIN28A",9]
["CC","GO:0044445","cytosolic part","16/374","207/18678",{"v":4.5151673782638e-06,"d":"4.52E-06"},0.000475527843597974,0.000393915513461022,"RPL19/RPL27/RPL41/RPL3/RPL18A/BLOC1S2/RPL14/AHR/RPS23/RPS3/UBA52/RPS13/RPS26/RPL24/RPL15/ENO2",16]
["CC","GO:0005925","focal adhesion","23/374","397/18678",{"v":5.71191538774541e-06,"d":"5.71E-06"},0.000475527843597974,0.000393915513461022,"RPL19/ANXA1/RPL27/RPL3/HSPA1B/FLOT2/CD44/ARHGAP26/PTPN12/MAP4K4/ADAM9/PALLD/PLAUR/RPS3/IGF2R/MISP/CD59/LMO7/KRAS/RPS13/PLAU/CAPN2/PDLIM1",23]
["CC","GO:0005924","cell-substrate adherens junction","23/374","399/18678",{"v":6.20253709040835e-06,"d":"6.20E-06"},0.000475527843597974,0.000393915513461022,"RPL19/ANXA1/RPL27/RPL3/HSPA1B/FLOT2/CD44/ARHGAP26/PTPN12/MAP4K4/ADAM9/PALLD/PLAUR/RPS3/IGF2R/MISP/CD59/LMO7/KRAS/RPS13/PLAU/CAPN2/PDLIM1",23]
["CC","GO:0030055","cell-substrate junction","23/374","404/18678",{"v":7.60122147499771e-06,"d":"7.60E-06"},0.000499508839785564,0.000413780778037469,"RPL19/ANXA1/RPL27/RPL3/HSPA1B/FLOT2/CD44/ARHGAP26/PTPN12/MAP4K4/ADAM9/PALLD/PLAUR/RPS3/IGF2R/MISP/CD59/LMO7/KRAS/RPS13/PLAU/CAPN2/PDLIM1",23]
["CC","GO:0030864","cortical actin cytoskeleton","6/374","57/18678",0.000949847324761616,0.0291286512926896,0.0241294548465758,"KRT19/FLOT2/SNX9/MISP/PLEKHH2/CAPN2",6]
["CC","GO:0030867","rough endoplasmic reticulum membrane","4/374","23/18678",0.0010361606955073,0.0297896199958349,0.0246769849851081,"RPL27/PLOD2/RPS26/SSR4",4]
["CC","GO:0015629","actin cytoskeleton","19/374","432/18678",0.00120558660545683,0.0326217552064788,0.0270230558003325,"MYO10/KRT19/ANXA1/CDC42EP3/FLOT2/SNX9/PTPN12/STK38L/GBP1/PALLD/TTC17/STX1A/DCTN1/MISP/ACKR2/PLEKHH2/RAB22A/ACTG2/CAPN2",19]
["CC","GO:0031970","organelle envelope lumen","7/374","82/18678",0.00127936447650355,0.0326948699550908,0.0270836222511279,"COA4/TIMM10/SOD1/IGF2R/CHCHD2/CAPN2/TIMM9",7]
["MF","GO:0016209","antioxidant activity","9/361","65/16969",{"v":9.03544444705336e-06,"d":"9.04E-06"},0.0030451543750207,0.00274002810322811,"PXDN/GSTK1/SOD1/GSTP1/NXN/GSTA1/MGST1/TXNDC17/PRDX1",9]
["MF","GO:0004601","peroxidase activity","7/361","37/16969",{"v":1.10531919238501e-05,"d":"1.11E-05"},0.0030451543750207,0.00274002810322811,"PXDN/GSTK1/GSTP1/GSTA1/MGST1/TXNDC17/PRDX1",7]
["MF","GO:0003735","structural constituent of ribosome","13/361","157/16969",{"v":3.1731207879701e-05,"d":"3.17E-05"},0.00437097388542881,0.0039329997135103,"RPL19/RPL27/RPL41/RPL3/RPL18A/RPL22L1/RPL14/RPS23/RPS3/UBA52/RPL24/RPL15/RPL36AL",13]
["MF","GO:0070888","E-box binding","7/361","49/16969",{"v":7.40777156340524e-05,"d":"7.41E-05"},0.00816336426287258,0.00734539032918709,"GATA3/BHLHE41/BHLHE40/MYC/NR1D1/MITF/AHR",7]
["MF","GO:0000978","RNA polymerase II proximal promoter sequence-specific DNA binding","21/361","432/16969",0.000399306331959731,0.0314311127014017,0.0282816965944411,"GATA3/BHLHE41/KLF5/BHLHE40/MED1/MYC/NR1D1/MITF/ZBTB2/AHR/HMGA2/NLRC5/GRHL1/NKX3-1/SIX2/MEIS1/RBPJ/ETV4/TBX5/RORA/STAT1",21]

{"sheet":"C5","index":4,"n_rows":28,"n_cols":10,"rows_kept":28,"flags":["formulas_cached_only"]}
["# Supplementary table 5.5. GO terms of lncRNA subtypes (C5)"]
["Category","ID","Description","GeneRatio","BgRatio","pvalue","p.adjust","qvalue","geneID","Count"]
["BP","GO:0070268","cornification","13/225","112/17913",{"v":1.55434226158739e-09,"d":"1.55E-09"},{"v":4.93659102280155e-06,"d":"4.94E-06"},{"v":4.26871469524368e-06,"d":"4.27E-06"},"DSG3/KRT18/KLK5/KRT15/KRT6B/DSC3/KRT23/KRT17/KRT14/KRT5/KRT81/KRT16/TMEM79",13]
["BP","GO:0008544","epidermis development","21/225","452/17913",{"v":2.82179375150209e-07,"d":"2.82E-07"},0.000298733898492355,0.000258317891146279,"ANXA1/UGCG/DSG3/KRT18/KLK5/FOXC1/KRT15/KRT6B/ERRFI1/DSC3/KRT23/KRT17/CALML5/KLK7/KRT14/KRT5/KRT81/KRT16/TMEM79/INHBA/SOSTDC1",21]
["BP","GO:0045104","intermediate filament cytoskeleton organization","6/225","42/17913",{"v":1.32075956127161e-05,"d":"1.32E-05"},0.00599247480942663,0.00518174691031223,"VIM/KRT18/SYNM/KRT17/KRT14/KRT16",6]
["BP","GO:0045103","intermediate filament-based process","6/225","43/17913",{"v":1.51895108018871e-05,"d":"1.52E-05"},0.00603023578834918,0.00521439916870045,"VIM/KRT18/SYNM/KRT17/KRT14/KRT16",6]
["BP","GO:0030850","prostate gland development","6/225","44/17913",{"v":1.74047197012104e-05,"d":"1.74E-05"},0.00611984694985212,0.00529188674670694,"FOXA1/CRIP1/SFRP1/PTEN/ID4/SERPINB5",6]
["BP","GO:0060512","prostate gland morphogenesis","5/225","27/17913",{"v":1.92690395146477e-05,"d":"1.93E-05"},0.00611984694985212,0.00529188674670694,"FOXA1/CRIP1/SFRP1/ID4/SERPINB5",5]
["BP","GO:0060218","hematopoietic stem cell differentiation","7/225","83/17913",{"v":8.30171419917633e-05,"d":"8.30E-05"},0.0239693129968946,0.0207264807135417,"SFRP1/MYB/FOXC1/PSMA3/PSMD14/PSMC2/PSMC6",7]
["BP","GO:1903391","regulation of adherens junction organization","6/225","67/17913",0.000193519705926606,0.0426524467357339,0.0368819546379192,"S100A10/EFNA5/SFRP1/APOD/PTEN/RDX",6]
["BP","GO:0007044","cell-substrate junction assembly","7/225","96/17913",0.000207673068994307,0.0426524467357339,0.0368819546379192,"S100A10/EFNA5/SFRP1/APOD/PTEN/KRT14/KRT5",7]
["BP","GO:0042698","ovulation cycle","6/225","68/17913",0.000210047879316558,0.0426524467357339,0.0368819546379192,"PAM/MMP7/ADAMTS1/INHBA/OPRK1/PTX3",6]
["BP","GO:0048863","stem cell differentiation","11/225","237/17913",0.00021108194939635,0.0426524467357339,0.0368819546379192,"FOXA1/SFRP1/MYB/FOXC1/PSMA3/SHC4/SOX6/PSMD14/A2M/PSMC2/PSMC6",11]
["BP","GO:0002576","platelet degranulation","8/225","128/17913",0.000214873787081783,0.0426524467357339,0.0368819546379192,"RAB27B/OLA1/SERPINA3/APP/PHACTR2/ISLR/A2M/TIMP3",8]
["CC","GO:0031012","extracellular matrix","19/233","468/18678",{"v":6.99397644764841e-06,"d":"6.99E-06"},0.00273464479103053,0.00233377950937321,"S100A10/LGALS1/EFNA5/ANXA1/SFRP1/MGP/COL6A1/CHI3L1/SERPINA3/PRELP/A2M/TIMP3/MMP7/BGN/ADAMTS1/THBS2/MMP2/COL8A1/PTX3",19]
["CC","GO:0060205","cytoplasmic vesicle lumen","15/233","338/18678",{"v":2.39170099168623e-05,"d":"2.39E-05"},0.00322583181185245,0.00275296455608353,"HEBP2/GSTP1/OLA1/CHI3L1/SERPINA3/APP/BPI/ISLR/PSMD14/A2M/PSMC2/TIMP3/SAA1/ALDOC/PTX3",15]
["CC","GO:0031983","vesicle lumen","15/233","339/18678",{"v":2.47506277124229e-05,"d":"2.48E-05"},0.00322583181185245,0.00275296455608353,"HEBP2/GSTP1/OLA1/CHI3L1/SERPINA3/APP/BPI/ISLR/PSMD14/A2M/PSMC2/TIMP3/SAA1/ALDOC/PTX3",15]
["CC","GO:0062023","collagen-containing extracellular matrix","16/233","399/18678",{"v":4.37426752484677e-05,"d":"4.37E-05"},0.00376640934538508,0.00321430007399938,"S100A10/LGALS1/EFNA5/ANXA1/SFRP1/MGP/COL6A1/SERPINA3/PRELP/A2M/TIMP3/BGN/ADAMTS1/THBS2/MMP2/COL8A1",16]
["CC","GO:0005882","intermediate filament","11/233","206/18678",{"v":5.77965628447839e-05,"d":"5.78E-05"},0.00376640934538508,0.00321430007399938,"VIM/KRT18/KRT15/KRT6B/SYNM/KRT23/KRT17/KRT14/KRT5/KRT81/KRT16",11]
["CC","GO:0005911","cell-cell junction","16/233","414/18678",{"v":6.76874919344831e-05,"d":"6.77E-05"},0.00378082990662613,0.00322660675838062,"ANXA1/PARD6B/DSG3/APP/RAP2C/FABP7/KRT18/EIF4G2/TRIM29/DSC3/PPP3CA/RDX/CALB2/CD2AP/TMEM47/PPP1CA",16]
["CC","GO:0042383","sarcolemma","8/233","125/18678",0.000174757709136985,0.00759225158584014,0.0064793209118625,"ANXA1/COL6A1/AHNAK2/SYNM/PPP3CA/RDX/BGN/SGCE",8]
["CC","GO:0098858","actin-based cell projection","10/233","200/18678",0.000214328875991801,0.00838025905127942,0.00715181617783167,"FOXA1/ATP8B1/APP/ARL4C/RDX/CALB2/MYO6/UBE2K/VEZT/OSBPL3",10]
["CC","GO:0045111","intermediate filament cytoskeleton","11/233","245/18678",0.000266267788066714,0.00946460955764411,0.00807721424087545,"VIM/KRT18/KRT15/KRT6B/SYNM/KRT23/KRT17/KRT14/KRT5/KRT81/KRT16",11]
["CC","GO:0005913","cell-cell adherens junction","6/233","79/18678",0.000459645408927172,0.0133596185456968,0.0114012628321063,"ANXA1/KRT18/EIF4G2/TRIM29/RDX/PPP1CA",6]
["CC","GO:0043197","dendritic spine","7/233","142/18678",0.00205629316078095,0.0423163487297554,0.0361132926297818,"PPP1R1B/APP/CRYAB/ZMYND8/PTEN/PPP3CA/PPP1CA",7]
["CC","GO:0044309","neuron spine","7/233","145/18678",0.00231431100498086,0.0452447801473758,0.0386124520304701,"PPP1R1B/APP/CRYAB/ZMYND8/PTEN/PPP3CA/PPP1CA",7]
["MF","GO:0005200","structural constituent of cytoskeleton","9/219","77/16969",{"v":6.35555933937768e-07,"d":"6.36E-07"},0.000253586817641169,0.000233483179941348,"VIM/KRT15/KRT6B/SYNM/CD2AP/KRT17/KRT14/KRT5/KRT16",9]
["MF","GO:0098641","cadherin binding involved in cell-cell adhesion","4/219","17/16969",{"v":5.63014430755004e-05,"d":"5.63E-05"},0.0112321378935623,0.0103416861228156,"ANXA1/KRT18/TRIM29/PPP1CA",4]

{"sheet":"C6","index":5,"n_rows":60,"n_cols":10,"rows_kept":60,"flags":["formulas_cached_only"]}
["# Supplementary table 5.6. GO terms of lncRNA subtypes (C6)"]
["Category","ID","Description","GeneRatio","BgRatio","pvalue","p.adjust","qvalue","geneID","Count"]
["BP","GO:0065004","protein-DNA complex assembly","21/463","210/17913",{"v":1.30902547990913e-07,"d":"1.31E-07"},0.000176267600673965,0.000162985366479366,"HIST1H2BC/HIST1H2BG/HIST1H4H/BRD2/HIST2H4B/HIST1H2BH/HIST2H4A/HIST1H1C/TSPYL2/HIST1H4J/RPA3/CDK7/HIST1H2BN/H2AFX/TERF1/HIST1H3H/HIST2H2BE/HIST1H3D/HELLS/CENPE/HIST1H4E",21]
["BP","GO:0006323","DNA packaging","20/463","194/17913",{"v":1.584815227998e-07,"d":"1.58E-07"},0.000176267600673965,0.000162985366479366,"HIST1H2BC/HIST1H2BG/HIST1H4H/BRD2/HIST2H4B/HIST1H2BH/HIST2H4A/HIST1H1C/TSPYL2/HIST1H4J/HIST1H2BN/H2AFX/HIST1H3H/HIST2H2BE/HIST1H3D/TOP2A/HELLS/SMC2/CCNB1/HIST1H4E",20]
["BP","GO:0042026","protein refolding","7/463","18/17913",{"v":1.83180359148004e-07,"d":"1.83E-07"},0.000176267600673965,0.000162985366479366,"HSP90AA1/HSPA1B/HSPD1/HSPA8/DNAJA4/HSPA2/HSPA6",7]
["BP","GO:0006333","chromatin assembly or disassembly","19/463","178/17913",{"v":1.8735386252486e-07,"d":"1.87E-07"},0.000176267600673965,0.000162985366479366,"HIST1H2BC/HIST1H2BG/HIST1H4H/BRD2/HIST2H4B/HIST1H2BH/HIST2H4A/HIST1H1C/TSPYL2/HIST1H4J/HIST1H2BN/H2AFX/SMARCE1/HIST1H3H/HIST2H2BE/HIST1H3D/TLK2/HELLS/HIST1H4E",19]
["BP","GO:0009266","response to temperature stimulus","21/463","219/17913",{"v":2.66460712865711e-07,"d":"2.66E-07"},0.000176267600673965,0.000162985366479366,"HSP90AA1/HSPA1B/HSPD1/YBX3/BAG3/DNAJB1/DNAJC7/HSPA8/CXCR4/SOD1/DNAJA4/DNAJA1/RPA3/NUP153/HSPA2/IER5/HSPA6/SIRT1/LXN/MICB/NUP93",21]
["BP","GO:0071103","DNA conformation change","24/463","279/17913",{"v":2.87053962596347e-07,"d":"2.87E-07"},0.000176267600673965,0.000162985366479366,"HIST1H2BC/HIST1H2BG/HIST1H4H/BRD2/HIST2H4B/HIST1H2BH/HIST2H4A/HIST1H1C/TSPYL2/HIST1H4J/HIST1H2BN/H2AFX/SETX/HIST1H3H/HIST2H2BE/GINS2/HIST1H3D/TOP2A/HELLS/SMC2/CCNB1/HHEX/MCM6/HIST1H4E",24]
["BP","GO:0071824","protein-DNA complex subunit organization","22/463","240/17913",{"v":3.03685258360264e-07,"d":"3.04E-07"},0.000176267600673965,0.000162985366479366,"HIST1H2BC/HIST1H2BG/HIST1H4H/BRD2/HIST2H4B/HIST1H2BH/HIST2H4A/HIST1H1C/TSPYL2/HIST1H4J/RPA3/CDK7/HIST1H2BN/H2AFX/TERF1/SMARCE1/HIST1H3H/HIST2H2BE/HIST1H3D/HELLS/CENPE/HIST1H4E",22]
["BP","GO:1901987","regulation of cell cycle phase transition","32/463","464/17913",{"v":5.05223924014346e-07,"d":"5.05E-07"},0.000205272480327029,0.000189804651032337,"HSP90AA1/PCNA/PLK2/RAD51C/PRKDC/PSME2/CNOT4/EZH2/OFD1/CUL3/HSPA2/PCM1/ID2/CDK5RAP3/PSMD11/CNOT1/HAUS1/CEP290/ATF5/ANLN/CCNB1/CDC27/CNTRL/BCL2/SDCCAG8/LCMT1/AURKA/TUBA1A/UBE2D1/CENPE/HAUS7/FBXW7",32]
["BP","GO:0070841","inclusion body assembly","7/463","23/17913",{"v":1.26136582303308e-06,"d":"1.26E-06"},0.000394225333767953,0.000364519402623891,"CLU/HSPA1B/BAG3/DNAJB1/DNAJA4/HSPA2/SORL1",7]
["BP","GO:0090083","regulation of inclusion body assembly","6/463","16/17913",{"v":1.85509594169611e-06,"d":"1.86E-06"},0.000502483654074086,0.000464620169537784,"CLU/HSPA1B/DNAJB1/DNAJA4/HSPA2/SORL1",6]
["BP","GO:0044839","cell cycle G2/M phase transition","21/463","257/17913",{"v":3.60916869524406e-06,"d":"3.61E-06"},0.000916503275548539,0.000847442307455661,"HSP90AA1/RAD51C/PSME2/CALM3/OFD1/CDK7/HSPA2/PCM1/CDK5RAP3/PSMD11/HAUS1/CEP290/ATF5/CCNB1/CNTRL/SDCCAG8/LCMT1/AURKA/TUBA1A/PPM1D/HAUS7",21]
["BP","GO:0043161","proteasome-mediated ubiquitin-dependent protein catabolic process","24/463","328/17913",{"v":5.06505395152225e-06,"d":"5.07E-06"},0.001083121800265,0.0010015056816057,"CLU/PLK2/PSME2/PCBP2/HERPUD1/CCDC47/UBE2H/CUL3/KLHL15/NEDD4L/PSMD11/ZFAND2A/SIRT1/TLK2/PTTG1/CCNB1/CDC27/RNF103/AURKA/GLMN/UBE2D1/AMFR/CAMLG/FBXW7",24]
["BP","GO:0000183","chromatin silencing at rDNA","8/463","39/17913",{"v":5.70408262356329e-06,"d":"5.70E-06"},0.00110360417616846,0.00102044465581441,"HIST1H4H/HIST2H4B/HIST2H4A/HIST1H4J/HIST1H3H/HIST1H3D/SIRT1/HIST1H4E",8]
["BP","GO:0051290","protein heterotetramerization","9/463","53/17913",{"v":7.68988822755909e-06,"d":"7.69E-06"},0.00135843547254663,0.00125607373382876,"HIST1H4H/HIST2H4B/HIST2H4A/HIST1H4J/KRT10/HIST1H3H/HIST1H3D/NUDT21/HIST1H4E",9]
["BP","GO:0035966","response to topologically incorrect protein","16/463","175/17913",{"v":1.29367967824463e-05,"d":"1.29E-05"},0.00210248821308317,0.00194406011438109,"HSP90AA1/CLU/HSPD1/BAG3/DNAJB1/HSPA8/TSPYL2/HERPUD1/DNAJA1/CUL3/KLHL15/CDK5RAP3/ATF3/HSPA4L/AMFR/GOSR2",16]
["BP","GO:0000723","telomere maintenance","14/463","154/17913",{"v":4.7522867176735e-05,"d":"4.75E-05"},0.00622856159158304,0.00575922285072215,"HSP90AA1/PPP1R10/PCNA/HIST1H4H/RAD51C/HIST2H4B/HIST2H4A/PRKDC/HIST1H4J/RPA3/TERF1/CCNE2/DCP2/HIST1H4E",14]
["BP","GO:0006260","DNA replication","19/463","260/17913",{"v":4.9401894931294e-05,"d":"4.94E-05"},0.0062507607823666,0.0057797492732273,"RBBP6/CACYBP/PCNA/NFIB/TSPYL2/RPA3/TERF1/STAG2/RRM2B/POLG2/GINS2/CCNE2/ATF1/MCMBP/BCL6/MCM6/KAT7/POLH/FBXW7",19]
["BP","GO:0045814","negative regulation of gene expression, epigenetic","11/463","101/17913",{"v":5.98805857703183e-05,"d":"5.99E-05"},0.00693378874687184,0.00641130925750628,"HIST1H4H/HIST2H4B/HIST2H4A/HIST1H4J/EZH2/HIST1H3H/HIST1H3D/SIRT1/HELLS/PPM1D/HIST1H4E",11]
["BP","GO:0017038","protein import","13/463","140/17913",{"v":7.07598400354202e-05,"d":"7.08E-05"},0.00769606378662565,0.00711614483839189,"APOD/KPNA2/HSP90AA1/CLU/BAG3/JUP/PPP1R10/HSPA8/RBM22/TNPO3/PEX2/RANBP17/KPNB1",13]
["BP","GO:0045653","negative regulation of megakaryocyte differentiation","5/463","18/17913",{"v":7.32112871832129e-05,"d":"7.32E-05"},0.00769606378662565,0.00711614483839189,"HIST1H4H/HIST2H4B/HIST2H4A/HIST1H4J/HIST1H4E",5]
["BP","GO:0044773","mitotic DNA damage checkpoint","10/463","86/17913",{"v":7.38731202752646e-05,"d":"7.39E-05"},0.00769606378662565,0.00711614483839189,"PPP1R10/PCNA/PLK2/PRKDC/CNOT4/ATF2/CDK5RAP3/CNOT1/CCNB1/AURKA",10]
["BP","GO:0031647","regulation of protein stability","19/463","272/17913",{"v":9.03406386301289e-05,"d":"9.03E-05"},0.00917635036885534,0.00848488787555079,"HSP90AA1/CLU/HSPA1B/HSPD1/BAG3/HSPA8/PRKDC/CDK7/HYPK/CUL3/NEDD4L/SIRT1/PEX2/TAF9B/KAT2A/BCL2/AURKA/CAMLG/FBXW7",19]
["BP","GO:0030330","DNA damage response, signal transduction by p53 class mediator","11/463","106/17913",{"v":9.33071365744446e-05,"d":"9.33E-05"},0.00924650965614557,0.00854976047327838,"PCNA/PLK2/HIPK2/CNOT4/DDX5/CNOT1/SIRT1/CCNB1/SNAI1/AURKA/PPM1D",11]
["BP","GO:0072594","establishment of protein localization to organelle","26/463","452/17913",0.000130597996463905,0.0123399920844848,0.0114101407436885,"APOD/KPNA2/HSP90AA1/CLU/RPL27/ECI2/BAG3/JUP/PPP1R10/HUWE1/HSPA8/CROT/CALM3/DNAJA1/RBM22/SRP54/TERF1/TNPO3/PEX2/ZFYVE16/BCL2/RANBP17/SORL1/UBE2D1/KPNB1/FBXW7",26]
["BP","GO:2001243","negative regulation of intrinsic apoptotic signaling pathway","10/463","94/17913",0.000156996083402454,0.0138668497144385,0.0128219455758206,"CLU/YBX3/HERPUD1/DNAJA1/RRM2B/SIRT1/TAF9B/SNAI1/BCL2/HIF1A",10]
["BP","GO:0043312","neutrophil degranulation","27/463","485/17913",0.000166354022299482,0.0143807743106978,0.0132971445820123,"SLPI/HSP90AA1/FTL/HSPA1B/MGST1/VAT1/JUP/HUWE1/DEGS1/HSPA8/GLA/HEBP2/CD55/GNS/SERPINB6/PNP/SERPINA3/GSTP1/RAB5C/PSMD11/HSPA6/RAP1A/CEP290/MPO/CRISPLD2/KPNB1/ATP6V0A1",27]
["BP","GO:0002283","neutrophil activation involved in immune response","27/463","488/17913",0.000183776053315956,0.0154164860507966,0.0142548126780297,"SLPI/HSP90AA1/FTL/HSPA1B/MGST1/VAT1/JUP/HUWE1/DEGS1/HSPA8/GLA/HEBP2/CD55/GNS/SERPINB6/PNP/SERPINA3/GSTP1/RAB5C/PSMD11/HSPA6/RAP1A/CEP290/MPO/CRISPLD2/KPNB1/ATP6V0A1",27]
["BP","GO:1901685","glutathione derivative metabolic process","5/463","22/17913",0.000206593781207644,0.0164586379028756,0.0152184356064,"MGST1/GSTM3/GSTP1/GSTM4/GSTA3",5]
["BP","GO:1901687","glutathione derivative biosynthetic process","5/463","22/17913",0.000206593781207644,0.0164586379028756,0.0152184356064,"MGST1/GSTM3/GSTP1/GSTM4/GSTA3",5]
["BP","GO:0034504","protein localization to nucleus","16/463","223/17913",0.00023605282278765,0.0184438965189658,0.0170540996868243,"APOD/KPNA2/NVL/BAG3/JUP/PPP1R10/RBM22/CDK5RAP3/GBP2/TNPO3/DCLK1/RANBP17/HHEX/KAT7/KPNB1/OSBPL8",16]
["BP","GO:0010948","negative regulation of cell cycle process","21/463","344/17913",0.000258995333296344,0.0193836630994107,0.0179230523470593,"PPP1R10/PCNA/PLK2/PRKDC/PSME2/CNOT4/EZH2/TERF1/STAG2/CDK5RAP3/PSMD11/CNOT1/ATF5/HMGN5/CCNB1/KAT2A/BCL2/BCL6/LCMT1/AURKA/FBXW7",21]
["BP","GO:0002446","neutrophil mediated immunity","27/463","499/17913",0.000262392682861823,0.0193836630994107,0.0179230523470593,"SLPI/HSP90AA1/FTL/HSPA1B/MGST1/VAT1/JUP/HUWE1/DEGS1/HSPA8/GLA/HEBP2/CD55/GNS/SERPINB6/PNP/SERPINA3/GSTP1/RAB5C/PSMD11/HSPA6/RAP1A/CEP290/MPO/CRISPLD2/KPNB1/ATP6V0A1",27]
["BP","GO:0042119","neutrophil activation","27/463","499/17913",0.000262392682861823,0.0193836630994107,0.0179230523470593,"SLPI/HSP90AA1/FTL/HSPA1B/MGST1/VAT1/JUP/HUWE1/DEGS1/HSPA8/GLA/HEBP2/CD55/GNS/SERPINB6/PNP/SERPINA3/GSTP1/RAB5C/PSMD11/HSPA6/RAP1A/CEP290/MPO/CRISPLD2/KPNB1/ATP6V0A1",27]
["BP","GO:0140056","organelle localization by membrane tethering","12/463","141/17913",0.000302408299302073,0.0215558757906021,0.0199315830140184,"HSP90AA1/SYT1/SYTL2/OFD1/PCM1/HAUS1/CEP290/CNTRL/SDCCAG8/TUBA1A/EXOC4/HAUS7",12]
["BP","GO:0022406","membrane docking","12/463","150/17913",0.000531516552181778,0.0354131545476353,0.0327446788296204,"HSP90AA1/SYT1/SYTL2/OFD1/PCM1/HAUS1/CEP290/CNTRL/SDCCAG8/TUBA1A/EXOC4/HAUS7",12]
["BP","GO:0061684","chaperone-mediated autophagy","4/463","16/17913",0.000626271800235071,0.0398591830282057,0.0368556871970844,"HSP90AA1/CLU/BAG3/HSPA8",4]
["BP","GO:0000077","DNA damage checkpoint","11/463","133/17913",0.0006799090957321,0.0412309053128287,0.0381240465462351,"PPP1R10/PCNA/PLK2/PRKDC/CNOT4/ATF2/H2AFX/CDK5RAP3/CNOT1/CCNB1/AURKA",11]
["BP","GO:0060964","regulation of gene silencing by miRNA","10/463","113/17913",0.000698104267644596,0.0417117299917646,0.0385686398022223,"HIST1H4H/HIST2H4B/HIST2H4A/HIST1H4J/NUP153/HIST1H3H/DDX5/HIST1H3D/HIST1H4E/NUP93",10]
["BP","GO:0097711","ciliary basal body-plasma membrane docking","9/463","95/17913",0.0007838861589568,0.0432209935200786,0.0399641762952345,"HSP90AA1/OFD1/PCM1/HAUS1/CEP290/CNTRL/SDCCAG8/TUBA1A/HAUS7",9]
["BP","GO:0000819","sister chromatid segregation","12/463","157/17913",0.00079791649721744,0.0432257963759261,0.0399686172430743,"RAD51C/CUL3/STAG2/KIF22/SMC2/CCNB1/CDC27/MCMBP/LCMT1/KPNB1/CENPE/FBXW7",12]
["BP","GO:0060147","regulation of posttranscriptional gene silencing","10/463","117/17913",0.000915427873930868,0.0473338999084802,0.0437671642093257,"HIST1H4H/HIST2H4B/HIST2H4A/HIST1H4J/NUP153/HIST1H3H/DDX5/HIST1H3D/HIST1H4E/NUP93",10]
["BP","GO:0060966","regulation of gene silencing by RNA","10/463","117/17913",0.000915427873930868,0.0473338999084802,0.0437671642093257,"HIST1H4H/HIST2H4B/HIST2H4A/HIST1H4J/NUP153/HIST1H3H/DDX5/HIST1H3D/HIST1H4E/NUP93",10]
["CC","GO:0044815","DNA packaging complex","25/478","113/18678",{"v":8.28048566861496e-17,"d":"8.28E-17"},{"v":2.60765606663742e-14,"d":"2.61E-14"},{"v":2.33157624328483e-14,"d":"2.33E-14"},"HIST1H2BK/HIST1H2BC/HIST1H2BG/HIST1H2AC/HIST2H2AA4/HIST1H4H/HIST2H2AA3/HIST2H4B/HIST1H2BH/HIST2H4A/HIST1H1C/HIST1H4J/HIST1H2BN/HIST1H2AM/HIST1H2AE/H2AFX/HIST1H3H/HIST2H2BE/HIST1H3D/H2AFJ/SMC2/HIST1H2AG/HIST1H2AD/HIST1H4E/HIST1H2AL",25]
["CC","GO:0032993","protein-DNA complex","31/478","187/18678",{"v":1.00681701414572e-16,"d":"1.01E-16"},{"v":2.60765606663742e-14,"d":"2.61E-14"},{"v":2.33157624328483e-14,"d":"2.33E-14"},"HIST1H2BK/HIST1H2BC/HIST1H2BG/TCF7L2/JUP/HIST1H2AC/PCNA/HIST2H2AA4/HIST1H4H/HIST2H2AA3/HIST2H4B/HIST1H2BH/HIST2H4A/HIST1H1C/PRKDC/HIST1H4J/RPA3/HIST1H2BN/HIST1H2AM/HIST1H2AE/H2AFX/TERF1/HIST1H3H/HIST2H2BE/HIST1H3D/H2AFJ/HIST1H2AG/HHEX/HIST1H2AD/HIST1H4E/HIST1H2AL",31]
["CC","GO:0000786","nucleosome","24/478","106/18678",{"v":1.96347446005252e-16,"d":"1.96E-16"},{"v":3.39026590102402e-14,"d":"3.39E-14"},{"v":3.03132899095828e-14,"d":"3.03E-14"},"HIST1H2BK/HIST1H2BC/HIST1H2BG/HIST1H2AC/HIST2H2AA4/HIST1H4H/HIST2H2AA3/HIST2H4B/HIST1H2BH/HIST2H4A/HIST1H1C/HIST1H4J/HIST1H2BN/HIST1H2AM/HIST1H2AE/H2AFX/HIST1H3H/HIST2H2BE/HIST1H3D/H2AFJ/HIST1H2AG/HIST1H2AD/HIST1H4E/HIST1H2AL",24]
["CC","GO:0034774","secretory granule lumen","25/478","321/18678",{"v":8.83286237238628e-07,"d":"8.83E-07"},{"v":9.15084541779219e-05,"d":"9.15E-05"},{"v":8.1820198817894e-05,"d":"8.18E-05"},"SLPI/OLA1/HSP90AA1/CLU/FTL/VAT1/JUP/MAGED2/HUWE1/HSPA8/GLA/HEBP2/GNS/SPARC/PNP/SERPINA3/GSTP1/PSMD11/HSPA6/CEP290/MPO/CRISPLD2/LGALS3BP/TIMP3/KPNB1",25]
["CC","GO:0031983","vesicle lumen","25/478","339/18678",{"v":2.37823297025917e-06,"d":"2.38E-06"},0.000175989239799178,0.000157356767956998,"SLPI/OLA1/HSP90AA1/CLU/FTL/VAT1/JUP/MAGED2/HUWE1/HSPA8/GLA/HEBP2/GNS/SPARC/PNP/SERPINA3/GSTP1/PSMD11/HSPA6/CEP290/MPO/CRISPLD2/LGALS3BP/TIMP3/KPNB1",25]
["CC","GO:0005775","vacuolar lumen","12/478","171/18678",0.00154013160196163,0.0498617606135077,0.0445827568988893,"HSP90AA1/FTL/VAT1/IFI30/HSPA8/GLA/HEBP2/GNS/SERPINA3/MPO/CTSV/LGMN",12]
["MF","GO:0046982","protein heterodimerization activity","40/472","497/16969",{"v":1.76265811911248e-09,"d":"1.76E-09"},{"v":1.07698411077772e-06,"d":"1.08E-06"},{"v":1.0297634274815e-06,"d":"1.03E-06"},"SYCP2/HIST1H2BK/HIST1H2BC/HIST1H2BG/HIST1H2AC/HIST2H2AA4/HIST1H4H/HIST2H2AA3/HIST2H4B/HIST1H2BH/HIST2H4A/SYT1/HIST1H4J/ATF2/HIST1H2BN/HIST1H2AM/HIST1H2AE/CUL3/H2AFX/KRT10/HIST1H3H/HIST2H2BE/HIST1H3D/ATF3/H2AFJ/TOP2A/TAF9B/PVALB/ATF1/SMC2/BCL2/TPM1/AURKA/HIST1H2AG/IKZF3/HIF1A/ADORA2A/HIST1H2AD/HIST1H4E/HIST1H2AL",40]
["MF","GO:0051087","chaperone binding","12/472","91/16969",{"v":8.02970355964441e-06,"d":"8.03E-06"},0.00245307443747137,0.00234551867136981,"CLU/DNAJC1/HSPD1/BAG3/DNAJB1/HSPA8/AHSA1/SOD1/DNAJA4/DNAJA1/HSPA2/AMFR",12]
["MF","GO:0045296","cadherin binding","22/472","297/16969",{"v":3.14496769401879e-05,"d":"3.14E-05"},0.00640525087015161,0.00612441077256291,"CAPG/OLA1/GPRC5A/BAG3/JUP/PDLIM5/DNAJB1/HSPA8/AHSA1/NOP56/EIF5/TES/TMPO/SPTBN1/HIST1H3H/HIST1H3D/PAICS/ZC3HAV1/ANLN/CNN3/KTN1/RARS",22]
["MF","GO:0008301","DNA binding, bending","5/472","19/16969",0.000137227155926287,0.0170023430838784,0.0162568703791067,"CRIP1/TERF1/TRERF1/TOP2A/HHEX",5]
["MF","GO:0044389","ubiquitin-like protein ligase binding","20/472","286/16969",0.000156539651284443,0.0170023430838784,0.0162568703791067,"HSP90AA1/CLU/HSPA1B/HSPD1/CACYBP/HIST1H2BH/HSPA8/CXCR4/PCBP2/DNAJA1/MAP1LC3B/CDK5RAP3/CASC3/CCNB1/BCL2/AURKA/GLMN/HIF1A/CAMLG/FBXW7",20]
["MF","GO:0043295","glutathione binding","4/472","11/16969",0.000166962452542177,0.0170023430838784,0.0162568703791067,"MGST1/GSTM3/GSTP1/GSTM4",4]
["MF","GO:1900750","oligopeptide binding","4/472","12/16969",0.000244951688543213,0.0213807830999861,0.0204433364122531,"MGST1/GSTM3/GSTP1/GSTM4",4]
["MF","GO:0004364","glutathione transferase activity","5/472","22/16969",0.000290074892774753,0.0221544699356717,0.0211831007223668,"MGST1/GSTM3/GSTP1/GSTM4/GSTA3",5]
["MF","GO:0003924","GTPase activity","16/472","224/16969",0.000552590037987803,0.0337632513210548,0.0322828916929717,"ARL4D/EIF5/SRP54/NKIRAS2/RAB5C/TUBB2A/GBP2/RAP1A/RND1/ARL1/ARHGAP5/RASA1/RGS16/TUBA1A/GBP3/RGS1",16]
["MF","GO:0031072","heat shock protein binding","10/472","108/16969",0.000856513405215985,0.0436108075489139,0.0416986789381467,"HSPA1B/DNAJB1/DNAJC7/HSPA8/AHSA1/DNAJA4/DNAJA1/HSPA6/HIF1A/KPNB1",10]

{"sheet":"C7","index":6,"n_rows":55,"n_cols":10,"rows_kept":55,"flags":["formulas_cached_only"]}
["# Supplementary table 5.7. GO terms of lncRNA subtypes (C7)"]
["Category","ID","Description","GeneRatio","BgRatio","pvalue","p.adjust","qvalue","GeneID","Count"]
["BP","GO:0034660","ncRNA metabolic process","61/780","470/17913",{"v":1.7840062736171e-14,"d":"1.78E-14"},{"v":4.3215722101258e-11,"d":"4.32E-11"},{"v":4.18626899413025e-11,"d":"4.19E-11"},"RPL7/GARS/RPL14/QARS/NSA2/GTF2F2/RPS28/RPL26/RPS19/MAPT/SARS/YARS/RPS9/GTF3A/SBDS/TARS/DCAF13/AIMP2/DIMT1/EMG1/EXOSC4/HARS/EXOSC5/PUS7/ELL3/RTCB/FARSA/NCBP2/INTS12/ZC3H8/EEF1E1/POP7/TRNT1/IMP3/RARS/IMP4/THG1L/CDK7/RCL1/PPA1/LARS/AARSD1/TRMT1/DUS1L/RRP8/WDR12/DALRD3/ZBTB8OS/NOB1/EXOSC7/RPP14/MARS/CARS/SMAD2/EXOSC2/SMAD1/TYW1/ELP6/NSUN4/DTD2/RPUSD4",61]
["BP","GO:0006520","cellular amino acid metabolic process","51/780","347/17913",{"v":1.98055555001182e-14,"d":"1.98E-14"},{"v":4.3215722101258e-11,"d":"4.32E-11"},{"v":4.18626899413025e-11,"d":"4.19E-11"},"ACY1/GARS/DDAH2/QARS/NIT2/AHCY/GAD1/DLD/AFMID/CKB/ASNS/SARS/PSMD6/YARS/PSAT1/DDAH1/FAH/TARS/AIMP2/PSMA2/SLC7A2/HARS/PPM1K/EGLN2/NQO1/FARSA/HGD/PSME2/BCKDHA/SHMT2/PYCR1/EEF1E1/PSMD8/RARS/CRTAP/CBS/PPA1/LARS/AARSD1/DALRD3/OGDH/MPST/MARS/ASNSD1/TST/CARS/GLS2/QDPR/HMGCL/BCAT2/GAMT",51]
["BP","GO:0140053","mitochondrial gene expression","31/780","148/17913",{"v":2.20611504769912e-13,"d":"2.21E-13"},{"v":3.20916202271965e-10,"d":"3.21E-10"},{"v":3.10868702861743e-10,"d":"3.11E-10"},"MRPS30/MRPL13/C1QBP/MRPL32/MRPL3/MRPS28/MRPL54/MRPS33/MRPS25/MRPS7/MRPL22/MRPS23/MRPS2/MRPS24/SHMT2/TRNT1/MRPL38/MRPL34/MRPS27/GADD45GIP1/MRPS12/MRPL40/TBRG4/MRPL49/CHCHD10/MRPL10/NSUN4/MRPL1/MRPS34/RPUSD4/MPV17L2",31]
["BP","GO:0006414","translational elongation","28/780","124/17913",{"v":4.52595985845601e-13,"d":"4.53E-13"},{"v":4.88396234165238e-10,"d":"4.88E-10"},{"v":4.73105136863234e-10,"d":"4.73E-10"},"MRPS30/MRPL13/RPL30/EEF1D/MRPL32/MRPL3/MRPS28/MRPL54/MRPS33/MRPS25/TUFM/MRPS7/MRPL22/MRPS23/MRPS2/MRPS24/CPEB2/MRPL38/MRPL34/MRPS27/GADD45GIP1/MRPS12/MRPL40/MRPL49/DPH2/MRPL10/MRPL1/MRPS34",28]
["BP","GO:0032543","mitochondrial translation","28/780","125/17913",{"v":5.59574053809851e-13,"d":"5.60E-13"},{"v":4.88396234165238e-10,"d":"4.88E-10"},{"v":4.73105136863234e-10,"d":"4.73E-10"},"MRPS30/MRPL13/C1QBP/MRPL32/MRPL3/MRPS28/MRPL54/MRPS33/MRPS25/MRPS7/MRPL22/MRPS23/MRPS2/MRPS24/SHMT2/MRPL38/MRPL34/MRPS27/GADD45GIP1/MRPS12/MRPL40/MRPL49/MRPL10/NSUN4/MRPL1/MRPS34/RPUSD4/MPV17L2",28]
["BP","GO:0045333","cellular respiration","30/780","176/17913",{"v":1.28220187422738e-10,"d":"1.28E-10"},{"v":4.3042530608679e-08,"d":"4.30E-08"},{"v":4.1694920865564e-08,"d":"4.17E-08"},"CISD1/UQCRB/CYC1/NDUFB9/DLD/NDUFS7/IDH3A/MDH2/NDUFAF2/NDUFS4/ETFB/NDUFA10/PDHB/FAHD1/SDHAF2/COX5A/ACO2/SLC25A23/SHMT2/LYRM7/UQCRC1/TREX1/UQCRFS1/NDUFB10/COQ9/TBRG4/COX15/OGDH/ISCU/FXN",30]
["BP","GO:0042254","ribosome biogenesis","31/780","202/17913",{"v":9.43009903798219e-10,"d":"9.43E-10"},{"v":2.93949658583959e-07,"d":"2.94E-07"},{"v":2.84746449146891e-07,"d":"2.85E-07"},"RPL7/RPL14/NSA2/C1QBP/RPS28/RPL26/RPS19/RPS9/GTF3A/SBDS/DCAF13/DIMT1/EMG1/EXOSC4/EXOSC5/MRPS2/GTPBP10/SDAD1/IMP3/IMP4/RCL1/MRTO4/RRP8/WDR12/NOB1/EXOSC7/EXOSC2/MRPL10/RPF2/NSUN4/MPV17L2",31]
["BP","GO:0007005","mitochondrion organization","50/780","466/17913",{"v":3.89118359128631e-09,"d":"3.89E-09"},{"v":9.98889717198438e-07,"d":"9.99E-07"},{"v":9.67615684371877e-07,"d":"9.68E-07"},"STOML2/MPV17/ERBB4/BCL2/CXADR/COA4/NDUFB9/YWHAZ/MAPT/FIS1/NDUFS7/VDAC1/GDAP1/HIGD1A/RRM2B/NDUFAF2/NDUFS4/CHCHD4/NDUFA10/TNFSF10/ARIH2/SLC35F6/FAM162A/MFF/NDUFAF4/PAM16/LYRM7/SLC25A4/NDUFB10/TIMM9/TMEM70/NDUFAF3/SESN2/SMIM20/CHCHD10/STAT2/HMGCL/TMEM126B/DNAJA3/CISD2/RHOU/CALM3/FXN/SAMM50/SLC25A46/PARL/AGK/ECSIT/SCO1/TMEM11",50]
["BP","GO:0043624","cellular protein complex disassembly","28/780","195/17913",{"v":2.71736678730822e-08,"d":"2.72E-08"},{"v":6.24136245253321e-06,"d":"6.24E-06"},{"v":6.04595291846528e-06,"d":"6.05E-06"},"MRPS30/MRPL13/MRPL32/MRPL3/MRPS28/MRPL54/MRPS33/MRPS25/MRPS7/MRPL22/MRPS23/MRPS2/MRPS24/MICAL2/CLASP2/OGFOD1/MRPL38/MRPL34/MRPS27/GADD45GIP1/APEH/MRPS12/MRPL40/VPS4A/MRPL49/MRPL10/MRPL1/MRPS34",28]
["BP","GO:0009167","purine ribonucleoside monophosphate metabolic process","36/780","317/17913",{"v":1.49739922629084e-07,"d":"1.50E-07"},{"v":3.2673251117666e-05,"d":"3.27E-05"},{"v":3.16502910146526e-05,"d":"3.17E-05"},"STOML2/IMPDH2/UQCRB/CYC1/NDUFB9/DLD/NDUFS7/RHOA/ENO1/PRKAG2/ATP6V1A/NDUFS4/NDUFA10/OLA1/AK1/PFKM/SDHAF2/COX5A/SLC25A23/SHMT2/UQCRC1/TREX1/SEH1L/UQCRFS1/NDUFB10/COQ9/MPP1/AK9/AK2/COX15/OGDH/ISCU/PRKAG1/CHCHD10/HPRT1/FXN",36]
["BP","GO:0006605","protein targeting","37/780","364/17913",{"v":1.57310997742112e-06,"d":"1.57E-06"},0.00019358483210046,0.000187523924385027,"RPL7/RPL8/RPL14/RPSA/RPL29/MPV17/RPL30/RPL32/RPL13A/RPL3/RPS28/AP1M2/RPL4/RPL26/YWHAZ/RPS19/FIS1/GDAP1/RPS9/MYO1C/CHCHD4/ARIH2/GABARAP/HACL1/MFF/PAM16/ACAA1/LARS/TIMM9/VPS4A/ZFAND2B/HMGCL/RHOU/SAMM50/PARL/AGK/ACOT4",37]
["BP","GO:0000956","nuclear-transcribed mRNA catabolic process","25/780","197/17913",{"v":1.5969417863466e-06,"d":"1.60E-06"},0.00019358483210046,0.000187523924385027,"RPL7/RPL8/RPL14/RPSA/RPL29/RPL30/RPL32/RPL13A/EIF3E/RPL3/RPS28/RPL4/RPL26/RPS19/TTC37/RPS9/EXOSC4/LSM4/EXOSC5/CASC3/NCBP2/ZFP36L1/PELO/EXOSC7/EXOSC2",25]
["BP","GO:0033108","mitochondrial respiratory chain complex assembly","15/780","87/17913",{"v":4.73385952615991e-06,"d":"4.73E-06"},0.000516464074304047,0.00050029420676469,"COA4/NDUFB9/NDUFS7/NDUFAF2/NDUFS4/NDUFA10/NDUFAF4/LYRM7/NDUFB10/NDUFAF3/SMIM20/TMEM126B/SAMM50/ECSIT/SCO1",15]
["BP","GO:0018208","peptidyl-proline modification","10/780","45/17913",{"v":1.84513540974445e-05,"d":"1.85E-05"},0.00164330018941322,0.00159185044157545,"PPIA/FKBP1A/NTMT1/PPIC/EGLN2/PPID/OGFOD1/CRTAP/FKBP11/PIN1",10]
["BP","GO:0006783","heme biosynthetic process","7/780","22/17913",{"v":2.77539235924767e-05,"d":"2.78E-05"},0.00242236245115136,0.00234652120310287,"SLC25A39/ALAD/SLC25A38/COX15/FECH/HMBS/FXN",7]
["BP","GO:0042168","heme metabolic process","8/780","30/17913",{"v":3.10684484265859e-05,"d":"3.11E-05"},0.00263271806165177,0.00255029083303427,"SLC25A39/HMOX2/ALAD/SLC25A38/COX15/FECH/HMBS/FXN",8]
["BP","GO:0072594","establishment of protein localization to organelle","39/780","452/17913",{"v":3.95349343807312e-05,"d":"3.95E-05"},0.0030809009578127,0.00298444166302663,"RPL7/RPL8/RPL14/RPSA/RPL29/MPV17/RPL30/RPL32/RPL13A/BCL2/RPL3/RPS28/RPL4/RPL26/YWHAZ/PPP3CA/RPS19/MAPT/FIS1/GDAP1/RPS9/CHCHD4/ARIH2/HACL1/MFF/PAM16/ACAA1/LARS/TIMM9/VPS4A/ZFAND2B/HMGCL/RHOU/CALM3/SAMM50/PARL/AGK/ACOT4/LRSAM1",39]
["BP","GO:0045947","negative regulation of translational initiation","6/780","18/17913",{"v":7.91272853426561e-05,"d":"7.91E-05"},0.00575519122058919,0.00557500312168609,"RPL13A/EIF3E/PAIP2/EIF4EBP3/LARP1/PAIP2B",6]
["BP","GO:0042255","ribosome assembly","7/780","26/17913",{"v":9.19127061391008e-05,"d":"9.19E-05"},0.0064694685417909,0.0062669172810633,"C1QBP/RPS19/SBDS/MRPS2/MRTO4/NSUN4/MPV17L2",7]
["BP","GO:1990542","mitochondrial transmembrane transport","11/780","66/17913",0.000119470748168985,0.00789955068196137,0.00765222527347119,"STOML2/SMDT1/PRKAG2/CHCHD4/SLC25A23/PAM16/TIMM9/SLC25A20/TST/SFXN3/AGK",11]
["BP","GO:0044282","small molecule catabolic process","34/780","404/17913",0.00019554806386767,0.0121910250102645,0.0118093387141739,"DDAH2/AHCY/GAD1/DLD/AFMID/ENO1/DDAH1/FAH/ETFB/PCCB/ACADM/PPM1K/PFKM/HACL1/ABHD10/HGD/BCKDHA/NT5C3A/ACAA1/CBS/HADHA/IMPA1/OGDH/MPST/TST/SNX17/SESN2/QDPR/HMGCL/BCAT2/HPRT1/PNP/MECR/ACOT4",34]
["BP","GO:2001235","positive regulation of apoptotic signaling pathway","19/780","178/17913",0.000287442487669472,0.0171835481669805,0.0166455519896265,"MAGED1/BCL2/RPL26/YWHAZ/FIS1/TNFSF10/IL20RA/FAM162A/TNFRSF12A/STK3/MFF/EEF1E1/BMPR1B/NKX3-1/SIAH1/DAPK3/CTSC/PPP2R1B/CHCHD10",19]
["BP","GO:0051188","cofactor biosynthetic process","27/780","310/17913",0.000509124395256855,0.0267689019385653,0.0259307998903175,"DLD/AFMID/ACSL1/ENO1/PSAT1/PRKAG2/PDHB/PFKM/SLC25A39/ELOVL1/CHAC1/CBR4/TREX1/ALAD/SEH1L/SLC25A38/COQ9/COX15/OGDH/ACOT7/FECH/HMBS/PRKAG1/NMRK1/FXN/COQ5/PNP",27]
["BP","GO:0042440","pigment metabolic process","10/780","66/17913",0.000534981124295101,0.0277935431717122,0.0269233608417184,"BCL2/SLC25A39/HMOX2/ALAD/SLC25A38/COX15/FECH/HMBS/HPRT1/FXN",10]
["BP","GO:0010821","regulation of mitochondrion organization","18/780","175/17913",0.000641660374910588,0.0311133986234423,0.0301392756215313,"STOML2/BCL2/YWHAZ/MAPT/FIS1/VDAC1/HIGD1A/TNFSF10/ARIH2/SLC35F6/FAM162A/MFF/PAM16/CHCHD10/STAT2/RHOU/FXN/PARL",18]
["BP","GO:0071826","ribonucleoprotein complex subunit organization","21/780","221/17913",0.000682778230120632,0.0327433428158949,0.0317181882263095,"ZFAND1/RPL13A/EIF3H/EIF3E/C1QBP/RPS19/MAPT/SBDS/EIF3M/EIF3K/MRPS2/TXNL4A/EIF3I/OGFOD1/MRTO4/RBM5/SMN1/GEMIN6/NSUN4/USP39/MPV17L2",21]
["BP","GO:0019083","viral transcription","18/780","177/17913",0.00073387892376566,0.0347088095623419,0.0336221185784083,"RPL7/RPL8/RPL14/RPSA/RPL29/RPL30/RPL32/RPL13A/GTF2F2/RPL3/RPS28/RPL4/RPL26/RPS19/RPS9/SEH1L/IFITM3/ZNF639",18]
["BP","GO:0001836","release of cytochrome c from mitochondria","9/780","57/17913",0.000739669864642025,0.0347088095623419,0.0336221185784083,"BCL2/FIS1/HIGD1A/TNFSF10/FAM162A/MFF/PAM16/CHCHD10/FXN",9]
["BP","GO:0001666","response to hypoxia","29/780","354/17913",0.000863015012131553,0.0392312240931469,0.0380029417622842,"BCL2/AHCY/HIPK2/FIS1/PSMD6/RHOA/EGR1/ENO1/HIGD1A/DDAH1/PSMA2/FAM162A/EGLN2/PSME2/UCP2/CPEB2/PSMD8/HMOX2/ALAD/ZFP36L1/KCND2/MDM2/ITGA2/CRYAB/NKX3-1/ERCC3/IRAK1/PAM/DNMT3A",29]
["BP","GO:0043201","response to leucine","4/780","11/17913",0.000920977765666149,0.0410117037690518,0.039727676766007,"RRAGD/LARS/PIK3C3/SESN2",4]
["CC","GO:0005759","mitochondrial matrix","76/817","448/18678",{"v":9.18962875504087e-25,"d":"9.19E-25"},{"v":4.94402027021199e-22,"d":"4.94E-22"},{"v":4.33363545500875e-22,"d":"4.33E-22"},"GARS/MRPS30/MRPL13/QARS/ERBB4/C1QBP/MRPL32/DLD/MRPL3/MRPS28/MRPL54/NDUFS7/IDH3A/MRPS33/MDH2/VDAC1/SMDT1/TUFM/ETFB/ACOT9/PCCB/MRPS7/NDUFA10/REXO2/PDHB/ACADM/MRPL22/MRPS2/PPM1K/MRPS24/FAHD1/SDHAF2/ABHD10/ACO2/PAM16/BCKDHA/ARL2/CBR4/SHMT2/CLPP/PYCR1/LYRM7/TRNT1/MRPL38/MRPL34/MRPS27/TOP1MT/GADD45GIP1/HMGCS2/MRPS12/HADHA/MRPL40/TBRG4/OGDH/MPST/ISCU/MRPL49/FECH/TST/PCK2/GUF1/GLS2/FDX1/MRPL10/HMGCL/ETHE1/BCAT2/LYRM4/DNAJA3/NSUN4/FXN/COQ5/MECR/MRPS34/RPUSD4/MPV17L2",76]
["CC","GO:0017101","aminoacyl-tRNA synthetase multienzyme complex","6/817","11/18678",{"v":2.63082806693415e-06,"d":"2.63E-06"},0.000101098964286469,{"v":8.86173664651502e-05,"d":"8.86E-05"},"QARS/AIMP2/EEF1E1/RARS/LARS/MARS",6]
["CC","GO:0005925","focal adhesion","35/817","397/18678",{"v":6.98007503586631e-05,"d":"6.98E-05"},0.00194319794521099,0.00170329227050386,"ALCAM/CNN3/RPL7/RPL8/PPIA/RPL30/RPL13A/RPL3/RPL4/YWHAZ/PHLDB2/RPS19/ARPC1B/RHOA/FLNB/PDCD6IP/RPS9/PALLD/REXO2/DCTN4/RALA/PRKAR2A/SNTB1/TRIP6/ARL2/CLASP2/MYH9/MARCKS/ITGA2/DIXDC1/ADAM10/CSRP1/PPFIBP1/RHOU/RRAS2",35]
["CC","GO:0030055","cell-substrate junction","35/817","404/18678",{"v":9.88792431012866e-05,"d":"9.89E-05"},0.00221654303285384,0.00194289039076212,"ALCAM/CNN3/RPL7/RPL8/PPIA/RPL30/RPL13A/RPL3/RPL4/YWHAZ/PHLDB2/RPS19/ARPC1B/RHOA/FLNB/PDCD6IP/RPS9/PALLD/REXO2/DCTN4/RALA/PRKAR2A/SNTB1/TRIP6/ARL2/CLASP2/MYH9/MARCKS/ITGA2/DIXDC1/ADAM10/CSRP1/PPFIBP1/RHOU/RRAS2",35]
["CC","GO:0031301","integral component of organelle membrane","18/817","166/18678",0.000359285990530566,0.00666537458294636,0.00584247273167672,"SFXN1/FIS1/GDAP1/SMDT1/STEAP2/SUN1/MFF/SLC25A4/PEX11B/TMEM70/SYPL1/EMC6/CHCHD10/AGK/BET1/SCO1/TMEM11/VAMP5",18]
["CC","GO:0070469","respiratory chain","12/817","88/18678",0.000437216316043488,0.00784074593437989,0.00687273366973624,"UQCRB/NDUFB9/NDUFS7/HIGD1A/NDUFS4/NDUFA10/HIGD2A/COX5A/UQCRC1/UQCRFS1/NDUFB10/COX15",12]
["CC","GO:0101002","ficolin-1-rich granule","19/817","185/18678",0.000496339584447912,0.00861389343332183,0.00755042899262019,"SERPINB6/LGALS3/PPIA/IMPDH2/DSP/PSMD6/RHOA/PDAP1/GYG1/DIAPH1/PSMA2/ALAD/APEH/OSTF1/CD58/COMMD9/DBNL/GNS/PNP",19]
["CC","GO:0072546","ER membrane protein complex","4/817","10/18678",0.00061759450070992,0.0103833075431855,0.00910139264204092,"EMC2/EMC3/EMC6/EMC7",4]
["CC","GO:1990204","oxidoreductase complex","12/817","93/18678",0.000726853012118384,0.0118499066824149,0.0103869266165562,"NDUFB9/DLD/NDUFS7/NDUFS4/NDUFA10/PDHB/BCKDHA/CBR4/UQCRC1/UQCRFS1/NDUFB10/OGDH",12]
["CC","GO:0044445","cytosolic part","20/817","207/18678",0.000780964789347377,0.0123576193137908,0.0108319574497717,"RPL7/RPL8/RPL14/RPSA/RPL29/RPL30/RPL32/RPL13A/RPL3/RPS28/RPL4/RPL26/RPS19/ENO1/RPS9/PFKM/PIN1/HBA2/HBA1/FXN",20]
["MF","GO:0140101","catalytic activity, acting on a tRNA","20/798","99/16969",{"v":2.81693306258263e-08,"d":"2.82E-08"},{"v":7.20949957764581e-06,"d":"7.21E-06"},{"v":6.69544705665803e-06,"d":"6.70E-06"},"GARS/QARS/SARS/TARS/HARS/FARSA/POP7/TRNT1/NT5C3A/RARS/LARS/AARSD1/TRMT12/TRMT1/DALRD3/RPP14/MARS/CARS/TYW1/DTD2",20]
["MF","GO:0004812","aminoacyl-tRNA ligase activity","12/798","35/16969",{"v":3.30710989800267e-08,"d":"3.31E-08"},{"v":7.20949957764581e-06,"d":"7.21E-06"},{"v":6.69544705665803e-06,"d":"6.70E-06"},"GARS/QARS/SARS/TARS/HARS/FARSA/RARS/LARS/AARSD1/DALRD3/MARS/CARS",12]
["MF","GO:0016875","ligase activity, forming carbon-oxygen bonds","12/798","35/16969",{"v":3.30710989800267e-08,"d":"3.31E-08"},{"v":7.20949957764581e-06,"d":"7.21E-06"},{"v":6.69544705665803e-06,"d":"6.70E-06"},"GARS/QARS/SARS/TARS/HARS/FARSA/RARS/LARS/AARSD1/DALRD3/MARS/CARS",12]
["MF","GO:0003735","structural constituent of ribosome","25/798","157/16969",{"v":8.20154391539027e-08,"d":"8.20E-08"},{"v":1.34095243016631e-05,"d":"1.34E-05"},{"v":1.2453396945211e-05,"d":"1.25E-05"},"RPL7/RPL8/MRPS30/MRPL13/RPL14/RPL29/RPL30/RPL32/RPL13A/RPL3/RPL4/RPL26/MRPL32/RPS19/RPL22L1/MRPS33/MRPS7/MRPS23/MRPS2/MRPS24/MRPL34/MRPS12/MRPL10/MRPL1/MRPS34",25]
["MF","GO:0140098","catalytic activity, acting on RNA","34/798","268/16969",{"v":1.38516844685566e-07,"d":"1.39E-07"},{"v":1.81180032848721e-05,"d":"1.81E-05"},{"v":1.6826151449173e-05,"d":"1.68E-05"},"GARS/QARS/SARS/RNASEK/TARS/DIMT1/EMG1/EXOSC4/HARS/EXOSC5/RTCB/FARSA/POP7/POLR1D/TRNT1/NT5C3A/RARS/LARS/DDX10/AARSD1/TRMT12/TRMT1/DALRD3/NOB1/EXOSC7/POLR3H/RPP14/MARS/CARS/EXOSC2/POLR3C/TYW1/NSUN4/DTD2",34]
["MF","GO:0048037","cofactor binding","45/798","438/16969",{"v":7.32508891759088e-07,"d":"7.33E-07"},{"v":7.98434692017406e-05,"d":"7.98E-05"},{"v":7.41504614991217e-05,"d":"7.42E-05"},"SLC48A1/CISD1/NQO2/CYC1/AHCY/GAD1/DLD/GSTM3/ASNS/NDUFS7/IDH3A/CHDH/TKT/ACADM/CISD3/CD320/HACL1/EGLN2/ACO2/MICAL2/CBR4/SHMT2/OGFOD1/PGD/CBS/UQCRFS1/THAP4/P4HTM/HADHA/CYB561D2/DUS1L/COX15/OGDH/ACOT7/GSTM1/CYB5D2/FECH/PAM/STEAP4/FDX1/HMGCL/TYW1/CISD2/FXN/NFU1",45]
["MF","GO:0019843","rRNA binding","11/798","44/16969",{"v":4.28248869150924e-06,"d":"4.28E-06"},0.000365830407826017,0.000339745928401113,"RPL8/RPL3/GTF3A/SBDS/IMP3/MRPS27/MDM2/RPF1/TST/RPF2/NSUN4",11]
["MF","GO:0051537","2 iron, 2 sulfur cluster binding","7/798","18/16969",{"v":9.9973849887148e-06,"d":"1.00E-05"},0.000653828978261948,0.000607209593525099,"CISD1/CISD3/UQCRFS1/FECH/FDX1/CISD2/FXN",7]
["MF","GO:0016830","carbon-carbon lyase activity","9/798","49/16969",0.000405891984911731,0.0189609541523051,0.0176089981424112,"GAD1/FAHD1/HACL1/ECHDC1/BCKDHA/SHMT2/PCK2/HMGCL/TYW1",9]
["MF","GO:0009055","electron transfer activity","13/798","97/16969",0.000602479052779166,0.0262680867011716,0.0243951167335845,"NQO2/CYC1/DLD/NDUFAF2/AKR7A3/ETFB/COX5A/GLRX/UQCRC1/COX15/STEAP4/QDPR/FDX1",13]
["MF","GO:0008408","3'-5' exonuclease activity","8/798","44/16969",0.000907740922998455,0.0360421714521336,0.033472288633319,"REXO2/EXOSC4/EXOSC5/RAD50/TREX1/EXOSC7/RAD1/EXOSC2",8]
["MF","GO:0003755","peptidyl-prolyl cis-trans isomerase activity","6/798","26/16969",0.00108804184771841,0.0360421714521336,0.033472288633319,"PPIA/FKBP1A/PPIC/PPID/FKBP11/PIN1",6]
["MF","GO:0043022","ribosome binding","8/798","47/16969",0.00142252817361211,0.0443015916924914,0.0411427947956986,"RPSA/C1QBP/SBDS/EIF3K/OLA1/CPEB2/MRPS27/GUF1",8]