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{
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{
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{
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},
{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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"name":"dCTP deaminase",
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{
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"name":"dihydroneopterin aldolase reversible",
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
"id":"ACCC",
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{
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{
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{
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{
"id":"SUCBZL",
"name":"o-succinylbenzoate-CoA ligase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"coa_c":-1.0,
"ppi_c":1.0,
"sbzcoa_c":1.0,
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0542c and Rv0553",
"subsystem":"Menaquinone biosynthesis"
},
{
"id":"LEUabc",
"name":"L-leucine transport via ABC system",
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"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"leu__L_c":1.0,
"leu__L_e":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"NPHS",
"name":"naphthoate synthase",
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"coa_c":1.0,
"dhna_c":1.0,
"sbzcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0548c",
"subsystem":"Menaquinone biosynthesis"
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{
"id":"DHNAOT",
"name":"1,4-dihydroxy-2-naphthoate octaprenyltransferase",
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"co2_c":1.0,
"dhna_c":-1.0,
"h2o_c":1.0,
"o2_c":-0.5,
"octdp_c":-1.0,
"ppi_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Menaquinone biosynthesis"
},
{
"id":"PPTTm",
"name":"trans-pentaprenyltranstransferase, mitochondrial",
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"ipdp_c":-1.0,
"pendp_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Menaquinone biosynthesis"
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{
"id":"NH3t",
"name":"MNXR82602",
"metabolites":{
"nh3_c":1.0,
"nh3_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2920c",
"subsystem":"Transport"
},
{
"id":"PRASCSi",
"name":"phosphoribosylaminoimidazolesuccinocarboxamide synthase",
"metabolites":{
"25aics_c":1.0,
"5aizc_c":-1.0,
"adp_c":1.0,
"asp__L_c":-1.0,
"atp_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0780",
"subsystem":"Purine metabolism"
},
{
"id":"MMAA25",
"name":"MNXR90599",
"metabolites":{
"ahcys_c":1.0,
"amet_c":-1.0,
"cd37mhmc60acylACP_c":-1.0,
"cmc61meroacylcpacp_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0644c or Rv0503c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"ADOCBLS",
"name":"Adenosylcobalamin 5'-phosphate synthase",
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"adocbl_c":1.0,
"agdpcbi_c":-1.0,
"gmp_c":1.0,
"h_c":1.0,
"rdmbzi_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2208",
"subsystem":"Cofactor biosynthesis"
},
{
"id":"FCLT",
"name":"Ferrochelatase",
"metabolites":{
"fe2_c":-1.0,
"h_c":2.0,
"pheme_c":1.0,
"ppp9_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1485",
"subsystem":"Porphyrin metabolism"
},
{
"id":"G1SAT",
"name":"glutamate-1-semialdehyde aminotransferase",
"metabolites":{
"5aop_c":1.0,
"glu1sa_c":-1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0524",
"subsystem":"Porphyrin metabolism"
},
{
"id":"DHORDfum",
"name":"Fumarate dependent DHORD",
"metabolites":{
"dhor__S_c":-1.0,
"fum_c":-1.0,
"orot_c":1.0,
"succ_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2139",
"subsystem":"Pyrimidine metabolism"
},
{
"id":"FMNAT",
"name":"FMN adenylyltransferase",
"metabolites":{
"atp_c":-1.0,
"fad_c":1.0,
"fmn_c":-1.0,
"ppi_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2786c",
"subsystem":"Riboflavin metabolism"
},
{
"id":"LDH_D",
"name":"D-lactate dehydrogenase",
"metabolites":{
"h_c":1.0,
"lac__D_c":-1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"pyr_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Pyruvate metabolism"
},
{
"id":"TMDPP",
"name":"thymidine phosphorylase",
"metabolites":{
"2dr1p_c":1.0,
"pi_c":-1.0,
"thym_c":1.0,
"thymd_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3314c",
"subsystem":"Pyrimidine metabolism"
},
{
"id":"ACS2",
"name":"acetyl-CoA synthase (propionate)",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"coa_c":-1.0,
"ppa_c":-1.0,
"ppcoa_c":1.0,
"ppi_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3667",
"subsystem":"Lipid metabolism"
},
{
"id":"UPP3S",
"name":"uroporphyrinogen-III synthase",
"metabolites":{
"h2o_c":1.0,
"hmbil_c":-1.0,
"uppg3_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0511",
"subsystem":"Porphyrin metabolism"
},
{
"id":"ACS",
"name":"acetyl-CoA synthetase",
"metabolites":{
"ac_c":-1.0,
"accoa_c":1.0,
"amp_c":1.0,
"atp_c":-1.0,
"coa_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3667",
"subsystem":"Lipid metabolism"
},
{
"id":"HMBS",
"name":"hydroxymethylbilane synthase",
"metabolites":{
"h2o_c":-1.0,
"hmbil_c":1.0,
"nh3_c":4.0,
"ppbng_c":-4.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0510",
"subsystem":"Porphyrin metabolism"
},
{
"id":"PPBNGS",
"name":"porphobilinogen synthase",
"metabolites":{
"5aop_c":-2.0,
"h2o_c":2.0,
"ppbng_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0512",
"subsystem":"Porphyrin metabolism"
},
{
"id":"TMPPP",
"name":"thiamine-phosphate diphosphorylase",
"metabolites":{
"2mahmp_c":-1.0,
"4mpetz_c":-1.0,
"h_c":-1.0,
"ppi_c":1.0,
"thmmp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0414c",
"subsystem":"Cofactor biosynthesis"
},
{
"id":"IGAMD",
"name":"1D-myo-inositol 2-Acetamido-2-deoxy-D-glucopyranoside deacetylase",
"metabolites":{
"ac_c":1.0,
"h2o_c":-1.0,
"iacgam_c":-1.0,
"igam_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1170",
"subsystem":"Mycothiol biosynthesis"
},
{
"id":"THZPSN",
"name":"thiazole phosphate synthesis",
"metabolites":{
"4hba_c":1.0,
"4mpetz_c":1.0,
"adp_c":1.0,
"ala__L_c":1.0,
"atp_c":-1.0,
"co2_c":1.0,
"cys__L_c":-1.0,
"dxyl5p_c":-1.0,
"h2o_c":1.0,
"pi_c":1.0,
"tyr__L_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0417",
"subsystem":"Cofactor biosynthesis"
},
{
"id":"PPPGO_1",
"name":"Protoporphyrinogen IX oxidase",
"metabolites":{
"h2o2_c":3.0,
"o2_c":-3.0,
"ppp9_c":1.0,
"pppg9_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2677c or Rv1300",
"subsystem":"Porphyrin metabolism"
},
{
"id":"ICL",
"name":"Isocitrate lyase",
"metabolites":{
"glx_c":1.0,
"icit_c":-1.0,
"succ_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0467 or (Rv1915 and Rv1916)",
"subsystem":"Glyoxylate and dicarboxylate metabolism"
},
{
"id":"Ht",
"name":"proton diffusion",
"metabolites":{
"h_c":1.0,
"h_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2287 or Rv3236c",
"subsystem":"Transport"
},
{
"id":"THIC",
"name":"MNXR71755",
"metabolites":{
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"air_c":-1.0,
"for_c":2.0,
"h2o_c":-2.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0423c",
"subsystem":"Cofactor biosynthesis"
},
{
"id":"DESA13",
"name":"DESA13",
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"h_c":2.0,
"nadp_c":-2.0,
"nadph_c":2.0,
"octaptcACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0824c and Rv1094 and Rv3229c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"DESA12",
"name":"DESA12",
"metabolites":{
"cd21931ec54acylACP_c":1.0,
"h_c":2.0,
"nadp_c":-2.0,
"nadph_c":2.0,
"tetptacACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0824c and Rv1094 and Rv3229c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"DESA11",
"name":"DESA11",
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"cd21931ec50acylACP_c":1.0,
"h_c":2.0,
"nadp_c":-2.0,
"nadph_c":2.0,
"ptcnylACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0824c and Rv1094 and Rv3229c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"PNTK",
"name":"pantothenate kinase",
"metabolites":{
"4ppan_c":1.0,
"adp_c":1.0,
"atp_c":-1.0,
"pnto_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1092c",
"subsystem":"Pantothenate and CoA biosynthesis"
},
{
"id":"PCOA",
"name":"MNXR81007",
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"co2_c":2.0,
"coa_c":2.0,
"h2o_c":2.0,
"h_c":-4.0,
"malcoa_c":-3.0,
"nad_c":4.0,
"nadh_c":-4.0,
"pmcoa_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cofactor biosynthesis"
},
{
"id":"GLU_Dabc_rev",
"name":"T00217b",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"glu__D_c":-1.0,
"glu__D_e":1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"PTPATi",
"name":"pantetheine-phosphate adenylyltransferase",
"metabolites":{
"atp_c":-1.0,
"dpcoa_c":1.0,
"pan4p_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2965c",
"subsystem":"Pantothenate and CoA biosynthesis"
},
{
"id":"DPCOAK",
"name":"dephospho-CoA kinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"coa_c":1.0,
"dpcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1631",
"subsystem":"Pantothenate and CoA biosynthesis"
},
{
"id":"BO11",
"name":"BO11",
"metabolites":{
"accoa_c":1.0,
"coa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"hxcoa_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"occoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Beta-oxidation pathway"
},
{
"id":"BO10",
"name":"BO10",
"metabolites":{
"accoa_c":1.0,
"coa_c":-1.0,
"dcacoa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"occoa_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Beta-oxidation pathway"
},
{
"id":"BO13",
"name":"BO13",
"metabolites":{
"accoa_c":2.0,
"btcoa_c":-1.0,
"coa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Beta-oxidation pathway"
},
{
"id":"FADD268",
"name":"FADD268",
"metabolites":{
"ACP_c":-1.0,
"amp_c":1.0,
"lgnACP_c":1.0,
"lgnAMP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2930",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"BO15",
"name":"BO15",
"metabolites":{
"9hdcecoa_c":-1.0,
"accoa_c":1.0,
"cd_dd5cacoa_c":1.0,
"coa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Beta-oxidation pathway"
},
{
"id":"BO14",
"name":"BO14",
"metabolites":{
"9hdcecoa_c":1.0,
"accoa_c":1.0,
"coa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"ocdce9coa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Beta-oxidation pathway"
},
{
"id":"BO17",
"name":"BO17",
"metabolites":{
"cd_dd3cacoa_c":-1.0,
"td_dd2cacoa_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Beta-oxidation pathway"
},
{
"id":"BO16",
"name":"BO16",
"metabolites":{
"accoa_c":1.0,
"cd_dd3cacoa_c":1.0,
"cd_dd5cacoa_c":-1.0,
"coa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Beta-oxidation pathway"
},
{
"id":"BO19",
"name":"BO19",
"metabolites":{
"R_3hddcoa_c":-1.0,
"ddcacoa_c":1.0,
"h2o_c":1.0,
"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Beta-oxidation pathway"
},
{
"id":"BO18",
"name":"BO18",
"metabolites":{
"R_3hddcoa_c":1.0,
"h2o_c":-1.0,
"td_dd2cacoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Beta-oxidation pathway"
},
{
"id":"FADD261",
"name":"FADD261",
"metabolites":{
"atp_c":-1.0,
"phtriAMP_c":1.0,
"phtri_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2930",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"FADD267",
"name":"FADD267",
"metabolites":{
"ACP_c":-1.0,
"amp_c":1.0,
"behenACP_c":1.0,
"behenAMP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2930",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"FADD266",
"name":"FADD266",
"metabolites":{
"atp_c":-1.0,
"lgnAMP_c":1.0,
"lgnc_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2930",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"FADD265",
"name":"FADD265",
"metabolites":{
"atp_c":-1.0,
"behenAMP_c":1.0,
"behen_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2930",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"FADD264",
"name":"FADD264",
"metabolites":{
"ACP_c":-1.0,
"amp_c":1.0,
"phptACP_c":1.0,
"phptAMP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2930",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"CSD",
"name":"MNXR32753",
"metabolites":{
"cys__L_c":-1.0,
"h2o_c":-1.0,
"h2s_c":1.0,
"nh3_c":1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1464",
"subsystem":"Cysteine and methionine metabolism"
},
{
"id":"BKDA1",
"name":"BKDA1",
"metabolites":{
"2mbdhl_c":1.0,
"3mop_c":-1.0,
"co2_c":1.0,
"lpam_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2497c and Rv2496c",
"subsystem":"Lipid metabolism"
},
{
"id":"BKDA2",
"name":"BKDA2",
"metabolites":{
"2mpdhl_c":1.0,
"3mob_c":-1.0,
"co2_c":1.0,
"lpam_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2497c and Rv2496c",
"subsystem":"Lipid metabolism"
},
{
"id":"SIRA2",
"name":"MNXR84814",
"metabolites":{
"fdxox_c":-6.0,
"fdxrd_c":6.0,
"h2o_c":-3.0,
"h2s_c":-1.0,
"h_c":6.0,
"so3_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2391",
"subsystem":"Sulfur metabolism"
},
{
"id":"4ABUTabc_rev",
"name":"MNXR30199",
"metabolites":{
"4abut_c":-1.0,
"4abut_e":1.0,
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0522",
"subsystem":"Transport"
},
{
"id":"CHOL1",
"name":"MNXR19104",
"metabolites":{
"chol4en3one_c":1.0,
"chsterol_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1106c",
"subsystem":"Cholesterol degradation"
},
{
"id":"GLNabc_rev",
"name":"MNXR2704",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"gln__L_c":-1.0,
"gln__L_e":1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0411c and Rv0072 and Rv0073 and Rv2563 and Rv2564",
"subsystem":"Transport"
},
{
"id":"MAS8",
"name":"MAS8",
"metabolites":{
"co2_c":1.0,
"coa_c":1.0,
"dmlgncACP_c":-1.0,
"h2o_c":1.0,
"h_c":-2.0,
"mmcoa__S_c":-1.0,
"nadp_c":2.0,
"nadph_c":-2.0,
"tmhexcACP_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2940c",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"FAS42",
"name":"FAS42",
"metabolites":{
"3hc18acylACPFAS_c":1.0,
"bketoc18acylACPFAS_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS43",
"name":"FAS43",
"metabolites":{
"3hc18acylACPFAS_c":-1.0,
"h2o_c":1.0,
"td2ec18acylacpfas_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"PHBADD",
"name":"PHBADD",
"metabolites":{
"ahcys_c":3.0,
"amet_c":-3.0,
"phbz1g_c":-1.0,
"phbz2_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"p-HBAD biosynthesis"
},
{
"id":"FAS41",
"name":"FAS41",
"metabolites":{
"bketoc18acylACPFAS_c":1.0,
"co2_c":1.0,
"malc16aclACPFAS_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS46",
"name":"FAS46",
"metabolites":{
"bketoc20acylACPFAS_c":1.0,
"co2_c":1.0,
"malc18aclACPFAS_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS47",
"name":"FAS47",
"metabolites":{
"3hc20acylACPFAS_c":1.0,
"bketoc20acylACPFAS_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS44",
"name":"FAS44",
"metabolites":{
"c18acylACPFAS_c":1.0,
"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0,
"td2ec18acylacpfas_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS45",
"name":"FAS45",
"metabolites":{
"c18acylACPFAS_c":-1.0,
"coa_c":1.0,
"malc18aclACPFAS_c":1.0,
"malcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS48",
"name":"FAS48",
"metabolites":{
"3hc20acylACPFAS_c":-1.0,
"h2o_c":1.0,
"td2ec20acylacpfas_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS49",
"name":"FAS49",
"metabolites":{
"c20acylACPFAS_c":1.0,
"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0,
"td2ec20acylacpfas_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"LEUTAi",
"name":"leucine transaminase (irreversible)",
"metabolites":{
"4mop_c":-1.0,
"akg_c":1.0,
"glu__L_c":-1.0,
"leu__L_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2210c",
"subsystem":"Valine, leucine and isoleucine degradation"
},
{
"id":"VALTA",
"name":"valine transaminase",
"metabolites":{
"3mob_c":-1.0,
"akg_c":1.0,
"glu__L_c":-1.0,
"val__L_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2210c",
"subsystem":"Valine, leucine and isoleucine degradation"
},
{
"id":"ILETA",
"name":"isoleucine transaminase",
"metabolites":{
"3mop_c":1.0,
"akg_c":-1.0,
"glu__L_c":1.0,
"ile__L_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2210c",
"subsystem":"Valine, leucine and isoleucine degradation"
},
{
"id":"ARACHt",
"name":"fatty acid transport via diffusion",
"metabolites":{
"arach_c":1.0,
"arach_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"NADK",
"name":"NAD kinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"nad_c":-1.0,
"nadp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1695",
"subsystem":"Nicotinate and nicotinamide metabolism"
},
{
"id":"GMPS2",
"name":"GMP synthase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"gln__L_c":-1.0,
"glu__L_c":1.0,
"gmp_c":1.0,
"h2o_c":-1.0,
"ppi_c":1.0,
"xmp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3396c",
"subsystem":"Purine metabolism"
},
{
"id":"MBTA2",
"name":"MBTA2",
"metabolites":{
"acac_c":-1.0,
"h2o_c":6.0,
"h_c":-1.0,
"mcbts_c":1.0,
"n6hlys_c":-1.0,
"n6hlysocdce_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0,
"salc_c":-1.0,
"thr__L_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2384 and Rv2383c and Rv2382c and Rv2381c and Rv2380c and Rv2379c and Rv2377c",
"subsystem":"Mycobactin biosynthesis"
},
{
"id":"MBTA3",
"name":"MBTA3",
"metabolites":{
"acac_c":-1.0,
"h2o_c":6.0,
"h_c":-1.0,
"mcbtm_c":1.0,
"n6hlys_c":-1.0,
"n6hlysmal_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0,
"salc_c":-1.0,
"thr__L_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2384 and Rv2383c and Rv2382c and Rv2381c and Rv2380c and Rv2379c and Rv2377c",
"subsystem":"Mycobactin biosynthesis"
},
{
"id":"ALCD2x",
"name":"alcohol dehydrogenase (ethanol)",
"metabolites":{
"acald_c":-1.0,
"etoh_c":1.0,
"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1862 or Rv1530 or Rv0162c or Rv0761c",
"subsystem":"Glycolysis / Gluconeogenesis"
},
{
"id":"MCA",
"name":"MNXR90574",
"metabolites":{
"acyc_c":1.0,
"h2o_c":-1.0,
"igam_c":1.0,
"msh_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1082",
"subsystem":"Mycothiol biosynthesis"
},
{
"id":"AOBUTDs",
"name":"L-2-amino-3-oxobutanoate decarboxylation (spontaneous)",
"metabolites":{
"2aobut_c":-1.0,
"aact_c":1.0,
"co2_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cofactor biosynthesis"
},
{
"id":"HETZK",
"name":"hydroxyethylthiazole kinase",
"metabolites":{
"4mhetz_c":-1.0,
"4mpetz_c":1.0,
"adp_c":1.0,
"atp_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cofactor biosynthesis"
},
{
"id":"ISCS",
"name":"ISCS",
"metabolites":{
"ala__L_c":1.0,
"cys__L_c":-1.0,
"fdxox_c":1.0,
"fe2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3025c or Rv1464",
"subsystem":"Cysteine and methionine metabolism"
},
{
"id":"DAPDC",
"name":"diaminopimelate decarboxylase",
"metabolites":{
"26dap_c":-1.0,
"co2_c":1.0,
"lys__L_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1293",
"subsystem":"Lysine biosynthesis"
},
{
"id":"MSHS",
"name":"mycothiol synthase",
"metabolites":{
"accoa_c":-1.0,
"cigam_c":-1.0,
"coa_c":1.0,
"msh_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0819",
"subsystem":"Mycothiol biosynthesis"
},
{
"id":"KASB19",
"name":"MNXR90601",
"metabolites":{
"ACP_c":1.0,
"bketoc56acylACP_c":1.0,
"co2_c":1.0,
"malACP_c":-1.0,
"tetptacACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2246 and Rv2245",
"subsystem":"Mycolic acid pathway"
},
{
"id":"KASB18",
"name":"MNXR90627",
"metabolites":{
"ACP_c":1.0,
"bketoc54acylACP_c":1.0,
"co2_c":1.0,
"dopentacon_c":-1.0,
"malACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2246 and Rv2245",
"subsystem":"Mycolic acid pathway"
},
{
"id":"KASB15",
"name":"MNXR90622",
"metabolites":{
"ACP_c":1.0,
"bketoc48acylACP_c":1.0,
"co2_c":1.0,
"hextetcACP_c":-1.0,
"malACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2246 and Rv2245",
"subsystem":"Mycolic acid pathway"
},
{
"id":"MALabc",
"name":"T00149a",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"mal_c":1.0,
"mal_e":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2443",
"subsystem":"Transport"
},
{
"id":"MALabc_rev",
"name":"T00149b",
"metabolites":{
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"atp_c":-1.0,
"h2o_c":-1.0,
"mal_c":-1.0,
"mal_e":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2443",
"subsystem":"Transport"
},
{
"id":"KASB16",
"name":"MNXR90559",
"metabolites":{
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"bketoc50acylACP_c":1.0,
"co2_c":1.0,
"malACP_c":-1.0,
"octatetcACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2246 and Rv2245",
"subsystem":"Mycolic acid pathway"
},
{
"id":"KASB11",
"name":"MNXR90572",
"metabolites":{
"ACP_c":1.0,
"bketoc40acylACP_c":1.0,
"co2_c":1.0,
"malACP_c":-1.0,
"octatriacACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2246 and Rv2245",
"subsystem":"Mycolic acid pathway"
},
{
"id":"KASB10",
"name":"MNXR90626",
"metabolites":{
"ACP_c":1.0,
"bketoc38acylACP_c":1.0,
"co2_c":1.0,
"hextriacACP_c":-1.0,
"malACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2246 and Rv2245",
"subsystem":"Mycolic acid pathway"
},
{
"id":"KASB13",
"name":"MNXR90590",
"metabolites":{
"ACP_c":1.0,
"bketoc44acylACP_c":1.0,
"co2_c":1.0,
"dotetracon_c":-1.0,
"malACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2246 and Rv2245",
"subsystem":"Mycolic acid pathway"
},
{
"id":"KASB12",
"name":"MNXR90618",
"metabolites":{
"ACP_c":1.0,
"bketoc42acylACP_c":1.0,
"co2_c":1.0,
"malACP_c":-1.0,
"tetcACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2246 and Rv2245",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FADD28",
"name":"FADD28",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"coa_c":1.0,
"h2o_c":-2.0,
"hpdca_c":1.0,
"hpdcalcoa_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0035 or Rv0099 or Rv0119 or Rv0166 or Rv0214 or Rv0270 or Rv0404 or Rv0551c or Rv0852 or Rv1058 or Rv1185c or Rv1193 or Rv1206 or Rv1427c or Rv1521 or Rv1529 or Rv1549 or Rv1550 or Rv1750c or Rv1925 or Rv2187 or Rv2505c or Rv2590 or Rv2930 or Rv2941 or Rv2948c or Rv2950c or Rv3089 or Rv3506 or Rv3513c or Rv3515c or Rv3561 or Rv3801c or Rv3826",
"subsystem":"Lipid metabolism"
},
{
"id":"26DAP_LLabc_rev",
"name":"T00666b",
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"26dap_LL_e":1.0,
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"MGCH",
"name":"methylglutaconyl-CoA hydratase",
"metabolites":{
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"h2o_c":-1.0,
"hmgcoa_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Valine, leucine and isoleucine degradation"
},
{
"id":"GLCabc_rev",
"name":"T00031b",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"glc__D_c":-1.0,
"glc__D_e":1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv2316 and Rv2317 and Rv2318) or (Rv1235 and Rv1236 and Rv1237 and Rv1238) or (Rv2038c and Rv2039c and Rv2040c and Rv2041c)",
"subsystem":"Transport"
},
{
"id":"GLCabc",
"name":"D-glucose transport via ABC system",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"glc__D_c":1.0,
"glc__D_e":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv2316 and Rv2317 and Rv2318) or (Rv1235 and Rv1236 and Rv1237 and Rv1238) or (Rv2038c and Rv2039c and Rv2040c and Rv2041c)",
"subsystem":"Transport"
},
{
"id":"BPNT",
"name":"3',5'-bisphosphate nucleotidase",
"metabolites":{
"amp_c":1.0,
"h2o_c":-1.0,
"pap_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2131c",
"subsystem":"Sulfur metabolism"
},
{
"id":"BPNT2",
"name":"3',5'-bisphosphate nucleotidase (paps)",
"metabolites":{
"aps_c":1.0,
"h2o_c":-1.0,
"paps_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2131c",
"subsystem":"Sulfur metabolism"
},
{
"id":"PCAA3",
"name":"PCAA3",
"metabolites":{
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"ahcys_c":1.0,
"amet_c":-1.0,
"cd131e19cpc55acylACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0470c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"PCAA2",
"name":"PCAA2",
"metabolites":{
"1931cpc54acylACP_c":1.0,
"ahcys_c":1.0,
"amet_c":-1.0,
"cd131e19cpc53acylACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0470c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"PCAA1",
"name":"PCAA1",
"metabolites":{
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"amet_c":-1.0,
"cd131e19cpc51acylACP_c":-1.0,
"meroacidcyc2ACP_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0470c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FADE282",
"name":"MNXR87738",
"metabolites":{
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"cholenec3coa_c":1.0,
"fad_c":-1.0,
"fadh2_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3544c and Rv3543c",
"subsystem":"Cholesterol degradation"
},
{
"id":"DASYN160190",
"name":"CDP-diacylglycerol synthetase (C16:0, C19:0)",
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"atp_c":2.0,
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"ctp_c":-1.0,
"h2o_c":1.0,
"pa160190_c":-1.0
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2881c",
"subsystem":"Glycerophospholipid metabolism"
},
{
"id":"FACOAL170",
"name":"fatty-acid--CoA ligase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"coa_c":-1.0,
"hpdca_c":-1.0,
"hpdcalcoa_c":1.0,
"ppi_c":1.0
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"lower_bound":0.0,
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"subsystem":"Lipid metabolism"
},
{
"id":"FAS37",
"name":"FAS37",
"metabolites":{
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"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS36",
"name":"FAS36",
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"co2_c":1.0,
"malc14aclACPFAS_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS35",
"name":"FAS35",
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"malc14aclACPFAS_c":1.0,
"malcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS34",
"name":"FAS34",
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"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0,
"td2ec14acylacpfas_c":-1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS33",
"name":"FAS33",
"metabolites":{
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"h2o_c":1.0,
"td2ec14acylacpfas_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS32",
"name":"FAS32",
"metabolites":{
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"nadp_c":1.0,
"nadph_c":-1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS31",
"name":"FAS31",
"metabolites":{
"bketoc14acylACPFAS_c":1.0,
"co2_c":1.0,
"malc12aclACPFAS_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS30",
"name":"FAS30",
"metabolites":{
"c12acylACPFAS_c":-1.0,
"coa_c":1.0,
"malc12aclACPFAS_c":1.0,
"malcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"XPPT",
"name":"xanthine phosphoribosyltransferase",
"metabolites":{
"ppi_c":1.0,
"prpp_c":-1.0,
"xan_c":-1.0,
"xmp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3624c",
"subsystem":"Purine metabolism"
},
{
"id":"GUAPRT",
"name":"guanine phosphoribosyltransferase",
"metabolites":{
"gmp_c":1.0,
"gua_c":-1.0,
"ppi_c":1.0,
"prpp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3624c",
"subsystem":"Purine metabolism"
},
{
"id":"HXPRT",
"name":"hypoxanthine phosphoribosyltransferase (Hypoxanthine)",
"metabolites":{
"hxan_c":-1.0,
"imp_c":1.0,
"ppi_c":1.0,
"prpp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3624c",
"subsystem":"Purine metabolism"
},
{
"id":"GTPCI",
"name":"GTP cyclohydrolase I",
"metabolites":{
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"for_c":1.0,
"gtp_c":-1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3609c",
"subsystem":"Folate biosynthesis"
},
{
"id":"FAS39",
"name":"FAS39",
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"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0,
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"upper_bound":1000.0,
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"subsystem":"Mycolic acid pathway"
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{
"id":"FAS38",
"name":"FAS38",
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"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Mycolic acid pathway"
},
{
"id":"G6PDA",
"name":"glucosamine-6-phosphate deaminase",
"metabolites":{
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"gam6p_c":-1.0,
"h2o_c":-1.0,
"nh3_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Amino sugar and nucleotide sugar metabolism"
},
{
"id":"CITt7",
"name":"Citrate transport via succinate antiport",
"metabolites":{
"cit_c":1.0,
"cit_e":-1.0,
"succ_c":-1.0,
"succ_e":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"ADNt2",
"name":"adenosine transport in via proton symport",
"metabolites":{
"adn_c":1.0,
"adn_e":-1.0,
"h_c":-1.0,
"h_e":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"TRE6PP",
"name":"trehalose-phosphatase",
"metabolites":{
"h2o_c":-1.0,
"pi_c":1.0,
"tre6p_c":-1.0,
"tre_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2006 or Rv3372",
"subsystem":"Starch and sucrose metabolism"
},
{
"id":"HOPNTAL2",
"name":"4-hydroxy-2-oxopentanoate aldolase(p-xylene)",
"metabolites":{
"4hoxoh_c":-1.0,
"ppal_c":1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3534c",
"subsystem":"Cholesterol degradation"
},
{
"id":"CDPPT160190",
"name":"CDP diacylglycerol inositon 3-phosphatidyltransferase",
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"cmp_c":1.0,
"inost_c":-1.0,
"ptd1ino160190_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2612c",
"subsystem":"Lipid metabolism"
},
{
"id":"VALt2r_rev",
"name":"T00183b",
"metabolites":{
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"atp_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0,
"val__L_c":-1.0,
"val__L_e":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"PGSA160190",
"name":"Phosphatidylglycerol synthase (C16:0,C19:0)",
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"cmp_c":1.0,
"glyc3p_c":-1.0,
"pgp160190_c":1.0
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2746c",
"subsystem":"Glycerophospholipid metabolism"
},
{
"id":"PGSA2",
"name":"MNXR1099",
"metabolites":{
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"glyc_c":1.0,
"pg160190_c":-2.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1822",
"subsystem":"Glycerophospholipid metabolism"
},
{
"id":"MAS6",
"name":"MAS6",
"metabolites":{
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"coa_c":1.0,
"dmlgncACP_c":1.0,
"h2o_c":1.0,
"h_c":-2.0,
"mbhnACP_c":-1.0,
"mmcoa__S_c":-1.0,
"nadp_c":2.0,
"nadph_c":-2.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2940c",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"MCACP",
"name":"MCACP",
"metabolites":{
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"dmlgncACP_c":-0.05,
"mycocerosoylacp_c":1.0,
"pmdecaACP_c":-0.05,
"pmoctaACP_c":-0.05,
"tamhexcACP_c":-0.65,
"tamoctaACP_c":-0.05,
"tmhexcACP_c":-0.05,
"tmlgncACP_c":-0.05
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"RBFSb",
"name":"riboflavin synthase",
"metabolites":{
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"dmlz_c":-2.0,
"ribflv_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1412",
"subsystem":"Riboflavin metabolism"
},
{
"id":"PPSC1",
"name":"PPSC1",
"metabolites":{
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"coa_c":1.0,
"h2o_c":1.0,
"h_c":-2.0,
"malcoa_c":-1.0,
"nad_c":2.0,
"nadh_c":-2.0,
"ph35dhc27acylacp_c":-1.0,
"ph57dhc29acylacp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2933",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"OTSB1",
"name":"MNXR90564",
"metabolites":{
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"pi_c":1.0,
"tre6mm_c":1.0,
"tre6mmp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3400 or Rv2006",
"subsystem":"Mycolic acid pathway"
},
{
"id":"ECHA192",
"name":"ECHA192",
"metabolites":{
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"h2o_c":-1.0,
"hcholc5coa_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3516 or Rv3538",
"subsystem":"Cholesterol degradation"
},
{
"id":"MNt2",
"name":"manganese transport in via proton symport",
"metabolites":{
"h_c":-2.0,
"h_e":2.0,
"mn2_c":1.0,
"mn2_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0924c",
"subsystem":"Transport"
},
{
"id":"NAGINSP",
"name":"MNXR61204",
"metabolites":{
"iacgam3p_c":1.0,
"mi3p__D_c":-1.0,
"uacgam_c":-1.0,
"udp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0486",
"subsystem":"Inositol phosphate metabolism"
},
{
"id":"MALS",
"name":"malate synthase",
"metabolites":{
"accoa_c":-1.0,
"coa_c":1.0,
"glx_c":-1.0,
"h2o_c":-1.0,
"mal_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1837c",
"subsystem":"Glyoxylate and dicarboxylate metabolism"
},
{
"id":"DCPDP",
"name":"decaprenyl-diphosphatase",
"metabolites":{
"decd_tb_c":1.0,
"decdp_tb_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2136c",
"subsystem":"Peptidoglycan biosynthesis"
},
{
"id":"ASNN",
"name":"L-asparaginase",
"metabolites":{
"asn_c":-1.0,
"asp__L_c":1.0,
"h2o_c":-1.0,
"nh3_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1538c",
"subsystem":"Alanine, aspartate and glutamate metabolism"
},
{
"id":"INO1",
"name":"MNXR75043",
"metabolites":{
"g6p_c":-1.0,
"mi3p__D_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0046c",
"subsystem":"Inositol phosphate metabolism"
},
{
"id":"PNCA",
"name":"MNXR3835",
"metabolites":{
"h2o_c":-1.0,
"nac_c":1.0,
"ncam_c":-1.0,
"nh3_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2043c",
"subsystem":"Nicotinate and nicotinamide metabolism"
},
{
"id":"FADE2",
"name":"FADE2",
"metabolites":{
"accoa_c":1.0,
"coa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"hpdcalcoa_c":-1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"ptdcacoa_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Lipid metabolism"
},
{
"id":"FADE3",
"name":"FADE3",
"metabolites":{
"accoa_c":1.0,
"coa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"ptdcacoa_c":-1.0,
"trdcalcoa_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Lipid metabolism"
},
{
"id":"CHORM",
"name":"chorismate mutase",
"metabolites":{
"chor_c":-1.0,
"pphn_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1885c or Rv0948c",
"subsystem":"Phenylalanine, tyrosine and tryptophan biosynthesis"
},
{
"id":"FADE1",
"name":"FADE1",
"metabolites":{
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"coa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"hpdcalcoa_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"nondcacoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Lipid metabolism"
},
{
"id":"FADE6",
"name":"FADE6",
"metabolites":{
"accoa_c":1.0,
"coa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"hpalcoa_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"nndccoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Lipid metabolism"
},
{
"id":"FADE7",
"name":"FADE7",
"metabolites":{
"accoa_c":1.0,
"coa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"hpalcoa_c":-1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"ptcoa_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Lipid metabolism"
},
{
"id":"FADE4",
"name":"FADE4",
"metabolites":{
"accoa_c":1.0,
"coa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"trdcalcoa_c":-1.0,
"undcoa_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Lipid metabolism"
},
{
"id":"FADE5",
"name":"FADE5",
"metabolites":{
"accoa_c":1.0,
"coa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"nndccoa_c":1.0,
"undcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Lipid metabolism"
},
{
"id":"FADE233",
"name":"R02661",
"metabolites":{
"2mp2coa_c":1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"ibcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3140",
"subsystem":"Lipid metabolism"
},
{
"id":"MBCOAi",
"name":"3-Methylbutanoyl-CoA:(acceptor) 2,3-oxidoreductase",
"metabolites":{
"3mb2coa_c":1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"ivcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3140",
"subsystem":"Lipid metabolism"
},
{
"id":"OIVD3",
"name":"2-oxoisovalerate dehydrogenase (acylating; 3-methyl-2-oxopentanoate)",
"metabolites":{
"2mb2coa_c":1.0,
"2mbcoa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3140",
"subsystem":"Lipid metabolism"
},
{
"id":"PPNDH",
"name":"prephenate dehydratase",
"metabolites":{
"co2_c":1.0,
"h2o_c":1.0,
"phpyr_c":1.0,
"pphn_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3838c",
"subsystem":"Phenylalanine, tyrosine and tryptophan biosynthesis"
},
{
"id":"KATG1",
"name":"KATG1",
"metabolites":{
"no3_c":1.0,
"no_c":-1.0,
"o2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1908c",
"subsystem":"Nitrogen metabolism"
},
{
"id":"CAT",
"name":"catalase",
"metabolites":{
"h2o2_c":-2.0,
"h2o_c":2.0,
"o2_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1908c",
"subsystem":"Peroxide metabolism"
},
{
"id":"MCITS",
"name":"2-methylcitrate synthase",
"metabolites":{
"2mcit_c":1.0,
"coa_c":1.0,
"h2o_c":-1.0,
"oaa_c":-1.0,
"ppcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1131",
"subsystem":"Citrate cycle (TCA cycle)"
},
{
"id":"AOXSr",
"name":"8-amino-7-oxononanoate synthase",
"metabolites":{
"8aonn_c":1.0,
"ala__L_c":-1.0,
"co2_c":1.0,
"coa_c":1.0,
"pmcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1569 and Rv0032",
"subsystem":"Cofactor biosynthesis"
},
{
"id":"LEUabc_rev",
"name":"T00123b",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"leu__L_c":-1.0,
"leu__L_e":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"PYRD1",
"name":"PYRD1",
"metabolites":{
"dhor__S_c":-1.0,
"h2o2_c":1.0,
"o2_c":-1.0,
"orot_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2139",
"subsystem":"Pyrimidine metabolism"
},
{
"id":"MYC1CYC5",
"name":"Mycolic Acid Cyclopropanation",
"metabolites":{
"CKC60MEROACYLACP_c":1.0,
"ahcys_c":1.0,
"amet_c":-1.0,
"cd37mkc59acylACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0644c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"ETOHt2r",
"name":"ethanol reversible transport via proton symport",
"metabolites":{
"etoh_c":1.0,
"etoh_e":-1.0,
"h_c":-1.0,
"h_e":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"MMAA24",
"name":"MNXR90593",
"metabolites":{
"ahcys_c":1.0,
"amet_c":-1.0,
"cd37mhmc58acylACP_c":-1.0,
"mmeroacidcyc2ACP_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0644c or Rv0503c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"MMAA23",
"name":"MMAA23",
"metabolites":{
"ahcys_c":1.0,
"amet_c":-1.0,
"cd131e19cpc55acylACP_c":1.0,
"cd21931ec54acylACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0644c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"MCITL2",
"name":"methylisocitrate lyase",
"metabolites":{
"micit_c":-1.0,
"pyr_c":1.0,
"succ_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0467 or (Rv1915 and Rv1916)",
"subsystem":"Methylcitrate cycle"
},
{
"id":"MMAA21",
"name":"MNXR90611",
"metabolites":{
"ahcys_c":1.0,
"amet_c":-1.0,
"cd131e19cpc51acylACP_c":1.0,
"cd21931ec50acylACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0644c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"ASP1DC",
"name":"aspartate 1-decarboxylase",
"metabolites":{
"ala_c":1.0,
"asp__L_c":-1.0,
"co2_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3601c",
"subsystem":"Alanine, aspartate and glutamate metabolism"
},
{
"id":"LPFPLT",
"name":"LPPG:Fo 2-phospho-L-lactate transferase",
"metabolites":{
"ddhrb_c":-1.0,
"f420_0_c":1.0,
"gmp_c":1.0,
"lppg_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3261 and Rv3262",
"subsystem":"Cofactor biosynthesis"
},
{
"id":"TREY",
"name":"MNXR86764",
"metabolites":{
"glycogen_c":-2.0,
"h2o_c":-1.0,
"tre_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1563c or Rv1562c",
"subsystem":"Starch and sucrose metabolism"
},
{
"id":"Kabc_rev",
"name":"T00238b",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"k_c":-1.0,
"k_e":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2691 and Rv2692",
"subsystem":"Transport"
},
{
"id":"PC",
"name":"pyruvate carboxylase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h_c":-1.0,
"hco3_c":-1.0,
"oaa_c":1.0,
"pi_c":1.0,
"pyr_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2967c",
"subsystem":"Citrate cycle (TCA cycle)"
},
{
"id":"FAS17",
"name":"FAS17",
"metabolites":{
"3hc8acylACPFAS_c":1.0,
"bketoc8acylACPFAS_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"PCD",
"name":"MNXR23091",
"metabolites":{
"L2aadp_c":1.0,
"h2o_c":-2.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"thp2c_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3293",
"subsystem":"L-alpha-aminoadipic acid (L-AAA) biosynthesis"
},
{
"id":"CADVt",
"name":"Lysine/Cadaverine antiporter",
"metabolites":{
"15dap_c":-1.0,
"15dap_e":1.0,
"h_c":-1.0,
"h_e":1.0,
"lys__L_c":1.0,
"lys__L_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"FAS16",
"name":"FAS16",
"metabolites":{
"bketoc8acylACPFAS_c":1.0,
"co2_c":1.0,
"malc6aclACPFAS_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"SHSL1",
"name":"O-succinylhomoserine lyase (L-cysteine)",
"metabolites":{
"cys__L_c":-1.0,
"cyst__L_c":1.0,
"succ_c":1.0,
"suchms_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1079",
"subsystem":"Cysteine and methionine metabolism"
},
{
"id":"SHSL4r",
"name":"O-succinylhomoserine lyase (elimination), reversible",
"metabolites":{
"2obut_c":1.0,
"h2o_c":-1.0,
"nh3_c":1.0,
"succ_c":1.0,
"suchms_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1079",
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{
"id":"METB2",
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"subsystem":"Cysteine and methionine metabolism"
},
{
"id":"METB1",
"name":"metb1",
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"subsystem":"Cysteine and methionine metabolism"
},
{
"id":"ADA",
"name":"Adenosine deaminase",
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},
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"subsystem":"Purine metabolism"
},
{
"id":"HSA",
"name":"MNXR75761",
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"subsystem":"Cholesterol degradation"
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{
"id":"ADD2",
"name":"MNXR1403",
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"lower_bound":0.0,
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"subsystem":"Purine metabolism"
},
{
"id":"APRAUR",
"name":"5-amino-6-(5-phosphoribosylamino)uracil reductase",
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"subsystem":"Riboflavin metabolism"
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{
"id":"PEPCKm",
"name":"Phosphoenolpyruvate carboxykinase (GTP)",
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{
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{
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{
"id":"FADB2",
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{
"id":"HBCO_nadp",
"name":"3-Hydroxybutanoyl-CoA:NADP+ oxidoreductase",
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"subsystem":"Butanoate metabolism"
},
{
"id":"KDH",
"name":"KDH",
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"subsystem":"Lipoamide metabolism"
},
{
"id":"FADD344",
"name":"FADD344",
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"subsystem":"Lipid metabolism"
},
{
"id":"FADD345",
"name":"FADD345",
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"subsystem":"Lipid metabolism"
},
{
"id":"FADD346",
"name":"FADD346",
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"gene_reaction_rule":"Rv0035 or Rv0099 or Rv0119 or Rv0166 or Rv0214 or Rv0270 or Rv0404 or Rv0551c or Rv0852 or Rv1058 or Rv1185c or Rv1193 or Rv1206 or Rv1427c or Rv1521 or Rv1529 or Rv1549 or Rv1550 or Rv1750c or Rv1925 or Rv2187 or Rv2505c or Rv2590 or Rv2930 or Rv2941 or Rv2948c or Rv2950c or Rv3089 or Rv3506 or Rv3513c or Rv3515c or Rv3561 or Rv3801c or Rv3826",
"subsystem":"Lipid metabolism"
},
{
"id":"FADD347",
"name":"FADD347",
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"subsystem":"Lipid metabolism"
},
{
"id":"FACOAL100",
"name":"FADD341",
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"subsystem":"Lipid metabolism"
},
{
"id":"FADD342",
"name":"FADD342",
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"subsystem":"Lipid metabolism"
},
{
"id":"DHPPDA2",
"name":"diaminohydroxyphosphoribosylaminopryrimidine deaminase (25drapp)",
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"subsystem":"Riboflavin metabolism"
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{
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{
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"ragund_c":1.0,
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{
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"subsystem":"Spermidine biosynthesis"
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{
"id":"ECOAH9ir",
"name":"2-Methylprop-2-enoyl-CoA (2-Methylbut-2-enoyl-CoA)",
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"h2o_c":-1.0
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"lower_bound":0.0,
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"subsystem":"Valine, leucine and isoleucine degradation"
},
{
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"name":"3-hydroxyacyl-CoA dehydratase (3-hydroxyisobutyryl-CoA) (mitochondria)",
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"3hibutcoa_c":1.0,
"h2o_c":-1.0
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"subsystem":"Valine, leucine and isoleucine degradation"
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{
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"name":"MNXR71589",
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"subsystem":"Cofactor biosynthesis"
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{
"id":"GF4GL_0",
"name":"GF4GL 0",
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"subsystem":"Cofactor biosynthesis"
},
{
"id":"PGPP160190",
"name":"phosphatidylglycerol phosphate phosphatase (C16:0, C19:0)",
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"pgp160190_c":-1.0,
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},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Glycerophospholipid metabolism"
},
{
"id":"KASB20",
"name":"MNXR90619",
"metabolites":{
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"bketoc58acylACP_c":1.0,
"co2_c":1.0,
"hexptcACP_c":-1.0,
"malACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2246 and Rv2245",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FABG18",
"name":"FABG18",
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"gene_reaction_rule":"Rv1483 or Rv1350 or Rv2002 or Rv0242c or Rv2766c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"MYCON5",
"name":"Mycolic Acid Condensation",
"metabolites":{
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"amp_c":1.0,
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"h2o_c":-1.0,
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"subsystem":"Mycolic acid pathway"
},
{
"id":"GLYK",
"name":"glycerol kinase",
"metabolites":{
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"atp_c":-1.0,
"glyc3p_c":1.0,
"glyc_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3696c",
"subsystem":"Glycerolipid metabolism"
},
{
"id":"ADOCBIK",
"name":"Adenosyl cobinamide kinase",
"metabolites":{
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"adp_c":1.0,
"atp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0254c",
"subsystem":"Cofactor biosynthesis"
},
{
"id":"ENO",
"name":"enolase",
"metabolites":{
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"h2o_c":1.0,
"pep_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1023",
"subsystem":"Glycolysis / Gluconeogenesis"
},
{
"id":"FADD348",
"name":"FADD348",
"metabolites":{
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"h2o_c":-2.0,
"ppi_c":1.0
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"gene_reaction_rule":"Rv0035 or Rv0099 or Rv0119 or Rv0166 or Rv0214 or Rv0270 or Rv0404 or Rv0551c or Rv0852 or Rv1058 or Rv1185c or Rv1193 or Rv1206 or Rv1427c or Rv1521 or Rv1529 or Rv1549 or Rv1550 or Rv1750c or Rv1925 or Rv2187 or Rv2505c or Rv2590 or Rv2930 or Rv2941 or Rv2948c or Rv2950c or Rv3089 or Rv3506 or Rv3513c or Rv3515c or Rv3561 or Rv3801c or Rv3826",
"subsystem":"Lipid metabolism"
},
{
"id":"HIBH",
"name":"3-hydroxyisobutyryl-coa hydrolase, mitochondrial",
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"3hibutcoa_c":-1.0,
"coa_c":1.0,
"h2o_c":-1.0
},
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"gene_reaction_rule":"",
"subsystem":"Valine, leucine and isoleucine degradation"
},
{
"id":"FADD349",
"name":"FADD349",
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"gene_reaction_rule":"Rv0035 or Rv0099 or Rv0119 or Rv0166 or Rv0214 or Rv0270 or Rv0404 or Rv0551c or Rv0852 or Rv1058 or Rv1185c or Rv1193 or Rv1206 or Rv1427c or Rv1521 or Rv1529 or Rv1549 or Rv1550 or Rv1750c or Rv1925 or Rv2187 or Rv2505c or Rv2590 or Rv2930 or Rv2941 or Rv2948c or Rv2950c or Rv3089 or Rv3506 or Rv3513c or Rv3515c or Rv3561 or Rv3801c or Rv3826",
"subsystem":"Lipid metabolism"
},
{
"id":"PPGPPDP",
"name":"guanosine-3',5'-bis(diphosphate) 3'-diphosphatase",
"metabolites":{
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"h2o_c":-1.0,
"ppgpp_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Purine metabolism"
},
{
"id":"FAS68",
"name":"FAS68",
"metabolites":{
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"arachcoa_c":1.0,
"c20acylACPFAS_c":-1.0,
"coa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"LIPY",
"name":"LIPY",
"metabolites":{
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"h2o_c":-10.0,
"hdca_c":2.0,
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"lgnc_c":1.0,
"nondca_c":1.0,
"ocdca_c":3.0,
"ptdca_c":1.0,
"tag_TB_c":-10.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3097c",
"subsystem":"Lipid metabolism"
},
{
"id":"PKS133",
"name":"PKS133",
"metabolites":{
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},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3800c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"PKS132",
"name":"PKS132",
"metabolites":{
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},
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"upper_bound":1000.0,
"gene_reaction_rule":"Rv3800c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"MYCON1",
"name":"Mycolic Acid Condensation",
"metabolites":{
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"coa_c":1.0,
"h2o_c":-1.0,
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"gene_reaction_rule":"Rv3800c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"CHCD",
"name":"MNXR22345",
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{
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{
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{
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"lower_bound":-1000.0,
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"lower_bound":0.0,
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{
"id":"UAMRH",
"name":"UDP-MurNAc Hydroxylase",
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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"gene_reaction_rule":"Rv0126",
"subsystem":"Starch and sucrose metabolism"
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{
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{
"id":"HCO3E",
"name":"HCO3 equilibration reaction",
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"lower_bound":-1000.0,
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"subsystem":"Carbon metabolism"
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{
"id":"RMLD",
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{
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"lower_bound":-1000.0,
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{
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"lower_bound":-1000.0,
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"subsystem":"Transport"
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{
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{
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{
"id":"CYTBD",
"name":"cytochrome oxidase bd (ubiquinol-8: 2 protons)",
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{
"id":"HEMEAS_1",
"name":"Heme A synthase",
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{
"id":"NTRIRy",
"name":"nitrite reductase (NADPH)",
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{
"id":"TESA8",
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"lower_bound":0.0,
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{
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"subsystem":"Quinolinate biosynthesis"
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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},
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},
{
"id":"NH3OHDs",
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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"subsystem":"Lipid metabolism"
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{
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"lower_bound":-1000.0,
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{
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{
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{
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"subsystem":"Porphyrin metabolism"
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{
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},
{
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{
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{
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"name":"Homogentisate:oxygen 1,2-oxidoreductase (decyclizing)",
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"gene_reaction_rule":"",
"subsystem":"Tyrosine metabolism"
},
{
"id":"ACLS",
"name":"acetolactate synthase",
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{
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"gene_reaction_rule":"",
"subsystem":"Porphyrin metabolism"
},
{
"id":"SADT",
"name":"sulfate adenylyltransferase",
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"atp_c":-1.0,
"ppi_c":1.0,
"so4_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1285 and Rv1286",
"subsystem":"Sulfur metabolism"
},
{
"id":"PPSA1",
"name":"PPSA1",
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"coa_c":1.0,
"h_c":-1.0,
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"ph3hc25acylacp_c":1.0,
"phtriACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2931",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"FABG2",
"name":"FABG2",
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"gene_reaction_rule":"Rv1483 or Rv1350 or Rv2002 or Rv0242c or Rv2766c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"GALT",
"name":"galactose-1-phosphate uridylyltransferase",
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"ppi_c":1.0,
"udpgal_c":1.0,
"utp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0619 or Rv0618",
"subsystem":"Galactose metabolism"
},
{
"id":"FADD3410",
"name":"FADD3410",
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"atp_c":-1.0,
"behen_c":-1.0,
"behencoa_c":1.0,
"coa_c":-1.0,
"ppi_c":1.0
},
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"gene_reaction_rule":"Rv0035 or Rv0099 or Rv0119 or Rv0166 or Rv0214 or Rv0270 or Rv0404 or Rv0551c or Rv0852 or Rv1058 or Rv1185c or Rv1193 or Rv1206 or Rv1427c or Rv1521 or Rv1529 or Rv1549 or Rv1550 or Rv1750c or Rv1925 or Rv2187 or Rv2505c or Rv2590 or Rv2930 or Rv2941 or Rv2948c or Rv2950c or Rv3089 or Rv3506 or Rv3513c or Rv3515c or Rv3561 or Rv3801c or Rv3826",
"subsystem":"Lipid metabolism"
},
{
"id":"BIRA",
"name":"BIRA",
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"atp_c":-1.0,
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"h2o_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3279c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FADD3411",
"name":"FADD3411",
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"atp_c":-1.0,
"coa_c":1.0,
"h2o_c":-2.0,
"ppi_c":1.0
},
"lower_bound":0.0,
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"subsystem":"Lipid metabolism"
},
{
"id":"AKGt2r",
"name":"2-oxoglutarate reversible transport via symport",
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"h_c":-1.0,
"h_e":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"TALA",
"name":"transaldolase",
"metabolites":{
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"f6p_c":1.0,
"g3p_c":-1.0,
"s7p_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1448c",
"subsystem":"Pentose phosphate pathway"
},
{
"id":"IMPD",
"name":"IMP dehydrogenase",
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"h_c":1.0,
"imp_c":-1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"xmp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3411c and Rv3410c and Rv1843c",
"subsystem":"Purine metabolism"
},
{
"id":"ARGSS",
"name":"argininosuccinate synthase",
"metabolites":{
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"asp__L_c":-1.0,
"atp_c":-1.0,
"citr_c":-1.0,
"ppi_c":1.0
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"gene_reaction_rule":"Rv1658",
"subsystem":"Alanine, aspartate and glutamate metabolism"
},
{
"id":"D_LACt2",
"name":"D lactate transport via proton symport",
"metabolites":{
"h_c":-1.0,
"h_e":1.0,
"lac__D_c":1.0,
"lac__D_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"FACOAL150",
"name":"fatty-acid--CoA ligase",
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"atp_c":-1.0,
"coa_c":-1.0,
"ppi_c":1.0,
"ptdca_c":-1.0,
"ptdcacoa_c":1.0
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"lower_bound":0.0,
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"subsystem":"Lipid metabolism"
},
{
"id":"FABD2",
"name":"FABD2",
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"coa_c":-1.0,
"td2ec16acylacpfas_c":-1.0
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"gene_reaction_rule":"(Rv2243 or Rv0649) and Rv2244",
"subsystem":"Lipid metabolism"
},
{
"id":"ANTHt",
"name":"MNXR29415",
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"anth_e":-1.0
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"lower_bound":-1000.0,
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"gene_reaction_rule":"",
"subsystem":"Transport"
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{
"id":"FABD1",
"name":"FABD1",
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"hdcaACP_c":-1.0,
"pmtcoa_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv2243 or Rv0649) and Rv2244",
"subsystem":"Lipid metabolism"
},
{
"id":"TMPK",
"name":"thiamine-phosphate kinase",
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"atp_c":-1.0,
"thmmp_c":-1.0,
"thmpp_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2977c",
"subsystem":"Cofactor biosynthesis"
},
{
"id":"PPTHIO4",
"name":"PPTHIO4",
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"ph4m3k911dhc36oate_c":-1.0,
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Dimycocerosate ester biosynthesis"
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{
"id":"PPTHIO5",
"name":"PPTHIO5",
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},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Dimycocerosate ester biosynthesis"
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{
"id":"PPTHIO2",
"name":"PPTHIO2",
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"AADSACYCL",
"name":"2-Aminoadipate 6-semialdehyde",
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"thp2c_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"L-alpha-aminoadipic acid (L-AAA) biosynthesis"
},
{
"id":"PYDXNtr",
"name":"pyridoxine transport via diffusion",
"metabolites":{
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"pydxn_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
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{
"id":"PPTHIO1",
"name":"PPTHIO1",
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"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Dimycocerosate ester biosynthesis"
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{
"id":"FAS14",
"name":"FAS14",
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FABD7",
"name":"FABD7",
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"coa_c":-1.0,
"lgnACP_c":-1.0,
"lgnccoa_c":1.0
},
"lower_bound":-1000.0,
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"gene_reaction_rule":"(Rv2243 or Rv0649) and Rv2244",
"subsystem":"Lipid metabolism"
},
{
"id":"OCDCEAt",
"name":"Octadecenoate (n-C18:1) transport in via uniport",
"metabolites":{
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"ocdcea_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"ACGK",
"name":"acetylglutamate kinase",
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"acglu_c":-1.0,
"adp_c":1.0,
"atp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1654",
"subsystem":"Arginine and proline metabolism"
},
{
"id":"UPPDC1",
"name":"uroporphyrinogen decarboxylase (uroporphyrinogen III)",
"metabolites":{
"co2_c":4.0,
"cpppg3_c":1.0,
"uppg3_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2678c",
"subsystem":"Porphyrin metabolism"
},
{
"id":"XANt",
"name":"xanthine reversible transport",
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"xan_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"SUCCabc_rev",
"name":"MNXR4946",
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},
"lower_bound":0.0,
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"subsystem":"Transport"
},
{
"id":"FADD3418",
"name":"FADD3418",
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"subsystem":"Lipid metabolism"
},
{
"id":"ACALD",
"name":"acetaldehyde dehydrogenase (acetylating)",
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"coa_c":-1.0,
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"lower_bound":-1000.0,
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"subsystem":"Lipid metabolism"
},
{
"id":"GF6PTA",
"name":"glutamine-fructose-6-phosphate transaminase",
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"gln__L_c":-1.0,
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{
"id":"PPK",
"name":"MNXR73871",
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"lower_bound":-1000.0,
"upper_bound":1000.0,
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"subsystem":"Phosphate metabolism"
},
{
"id":"UAGDP",
"name":"UDP-N-acetylglucosamine diphosphorylase",
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"uacgam_c":1.0,
"utp_c":-1.0
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv1018c",
"subsystem":"Peptidoglycan and lipopolysaccharide biosynthesis"
},
{
"id":"FOLR2",
"name":"folate reductase",
"metabolites":{
"dhf_c":-1.0,
"fol_c":1.0,
"h_c":1.0,
"nadp_c":-1.0,
"nadph_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2763c",
"subsystem":"Folate biosynthesis"
},
{
"id":"FABG9",
"name":"FABG9",
"metabolites":{
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"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"Rv1483 or Rv1350 or Rv2002 or Rv0242c or Rv2766c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"MI3PP",
"name":"myo-inositol 3-phosphatase",
"metabolites":{
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"inost_c":1.0,
"mi3p__D_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1604 or Rv2131c or Rv2701c",
"subsystem":"Inositol phosphate metabolism"
},
{
"id":"AFTA",
"name":"arabinofuranosyl transferase (M tb)",
"metabolites":{
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"decd_tb_c":1.0,
"decda_tb_c":-1.0,
"galfragund_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3792",
"subsystem":"Arabinogalactan biosynthesis"
},
{
"id":"FADD30",
"name":"FADD30",
"metabolites":{
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"coa_c":1.0,
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"nondca_c":1.0,
"nondcacoa_c":-1.0,
"ppi_c":1.0
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"lower_bound":0.0,
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"subsystem":"Lipid metabolism"
},
{
"id":"FAS24",
"name":"FAS24",
"metabolites":{
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},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS25",
"name":"FAS25",
"metabolites":{
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"malc10aclACPFAS_c":1.0,
"malcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS26",
"name":"FAS26",
"metabolites":{
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"co2_c":1.0,
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},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS27",
"name":"FAS27",
"metabolites":{
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"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS20",
"name":"FAS20",
"metabolites":{
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"malc8aclACPFAS_c":1.0,
"malcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS21",
"name":"FAS21",
"metabolites":{
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"co2_c":1.0,
"malc8aclACPFAS_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS22",
"name":"FAS22",
"metabolites":{
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"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS23",
"name":"FAS23",
"metabolites":{
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"h2o_c":1.0,
"td2ec10acylacpfas_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"CYSabc",
"name":"L-cysteine transport via ABC system",
"metabolites":{
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"atp_c":-1.0,
"cys__L_c":1.0,
"cys__L_e":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"PTHIO3",
"name":"PTHIO3",
"metabolites":{
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"co2_c":1.0,
"phthdlC32_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"PTHIO2",
"name":"PTHIO2",
"metabolites":{
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},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"FAS28",
"name":"FAS28",
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"td2ec12acylacpfas_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Mycolic acid pathway"
},
{
"id":"GDH1",
"name":"Glutamate dehydrogenase (NAD)",
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},
"lower_bound":0.0,
"upper_bound":1000.0,
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},
{
"id":"CITRt",
"name":"MNXR1174",
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"citr_e":-1.0
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"MMSAD2",
"name":"methylmalonate-semialdehyde dehydrogenase (propanol)",
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"ppal_c":-1.0,
"ppcoa_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Cholesterol degradation"
},
{
"id":"AKP1",
"name":"alkaline phosphatase (Dihydroneopterin)",
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"h2o_c":-3.0,
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},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Folate biosynthesis"
},
{
"id":"NAGINS",
"name":"MNXR21171",
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},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Mycothiol biosynthesis"
},
{
"id":"ADSK",
"name":"adenylyl-sulfate kinase",
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"aps_c":-1.0,
"atp_c":-1.0,
"paps_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1286",
"subsystem":"Sulfur metabolism"
},
{
"id":"MBTK2",
"name":"MBTK2",
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"n6hlysocdce_c":1.0,
"ocACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1347c",
"subsystem":"Mycobactin biosynthesis"
},
{
"id":"MBTK3",
"name":"MBTK3",
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"n6hlysmal_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1347c",
"subsystem":"Mycobactin biosynthesis"
},
{
"id":"CITabc_rev",
"name":"T00158b",
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"cit_c":-1.0,
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"lower_bound":0.0,
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"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"MBTK1",
"name":"MBTK1",
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"n6hlysocdc_c":1.0,
"ocdceACP_c":-1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1347c",
"subsystem":"Mycobactin biosynthesis"
},
{
"id":"HMPK1",
"name":"hydroxymethylpyrimidine kinase (ATP)",
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"4ampm_c":1.0,
"adp_c":1.0,
"atp_c":-1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0422c",
"subsystem":"Cofactor biosynthesis"
},
{
"id":"PMPK",
"name":"phosphomethylpyrimidine kinase",
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"atp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0422c",
"subsystem":"Cofactor biosynthesis"
},
{
"id":"NDPK1",
"name":"nucleoside-diphosphate kinase (ATP:GDP)",
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"atp_c":-1.0,
"gdp_c":-1.0,
"gtp_c":1.0
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2445c",
"subsystem":"Purine metabolism"
},
{
"id":"NDPK8",
"name":"nucleoside-diphosphate kinase (ATP:dADP)",
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"adp_c":1.0,
"atp_c":-1.0,
"dadp_c":-1.0,
"datp_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2445c",
"subsystem":"Purine metabolism"
},
{
"id":"NDPK2",
"name":"nucleoside-diphosphate kinase (ATP:UDP)",
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"adp_c":1.0,
"atp_c":-1.0,
"udp_c":-1.0,
"utp_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2445c",
"subsystem":"Pyrimidine metabolism"
},
{
"id":"NDPK5",
"name":"nucleoside-diphosphate kinase (ATP:dGDP)",
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"adp_c":1.0,
"atp_c":-1.0,
"dgdp_c":-1.0,
"dgtp_c":1.0
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2445c",
"subsystem":"Purine metabolism"
},
{
"id":"NDPK4",
"name":"nucleoside-diphosphate kinase (ATP:dTDP)",
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"adp_c":1.0,
"atp_c":-1.0,
"dtdp_c":-1.0,
"dttp_c":1.0
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2445c",
"subsystem":"Pyrimidine metabolism"
},
{
"id":"NDPK3",
"name":"nucleoside-diphosphate kinase (ATP:CDP)",
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"adp_c":1.0,
"atp_c":-1.0,
"cdp_c":-1.0,
"ctp_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2445c",
"subsystem":"Pyrimidine metabolism"
},
{
"id":"NDPK7",
"name":"nucleoside-diphosphate kinase (ATP:dCDP)",
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"adp_c":1.0,
"atp_c":-1.0,
"dcdp_c":-1.0,
"dctp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2445c",
"subsystem":"Pyrimidine metabolism"
},
{
"id":"BARB",
"name":"MNXR70450",
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"h2o_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"ura_c":-1.0
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Pyrimidine metabolism"
},
{
"id":"GTPDPDP",
"name":"guanosine-5'-triphosphate,3'-diphosphate diphosphatase",
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"h2o_c":-1.0,
"pi_c":1.0,
"ppgpp_c":1.0
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Purine metabolism"
},
{
"id":"MPTAT",
"name":"molybdopterin adenylyltransferase",
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"mptamp_c":1.0,
"ppi_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0865",
"subsystem":"Cofactor biosynthesis"
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{
"id":"CELLBabc",
"name":"Cellobiose transport via ATP transporter",
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"atp_c":-1.0,
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"h2o_c":-1.0,
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"lower_bound":0.0,
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{
"id":"ACCA3",
"name":"ACCA3",
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"lower_bound":0.0,
"upper_bound":1000.0,
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{
"id":"MAS5",
"name":"MAS5",
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"lower_bound":0.0,
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"subsystem":"Dimycocerosate ester biosynthesis"
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{
"id":"HSTPT",
"name":"histidinol-phosphate transaminase",
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{
"id":"SUCOAS",
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{
"id":"CPMPS",
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{
"id":"PHETA1",
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{
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{
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{
"id":"TYRTA",
"name":"tyrosine transaminase",
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"subsystem":"Tyrosine metabolism"
},
{
"id":"HIAA",
"name":"HIAA",
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"hia_c":1.0,
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"lower_bound":0.0,
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"subsystem":"Cholesterol degradation"
},
{
"id":"CYSS",
"name":"cysteine synthase",
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"lower_bound":0.0,
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"subsystem":"Cysteine and methionine metabolism"
},
{
"id":"HADA1",
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"lower_bound":0.0,
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{
"id":"HADA2",
"name":"HADA2",
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"lower_bound":0.0,
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{
"id":"HADA3",
"name":"HADA3",
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"lower_bound":0.0,
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"subsystem":"Mycolic acid pathway"
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{
"id":"HADA4",
"name":"HADA4",
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"lower_bound":0.0,
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"subsystem":"Mycolic acid pathway"
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{
"id":"HADA5",
"name":"HADA5",
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0635 and Rv0636 and Rv0637",
"subsystem":"Mycolic acid pathway"
},
{
"id":"HADA6",
"name":"HADA6",
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0635 and Rv0636 and Rv0637",
"subsystem":"Mycolic acid pathway"
},
{
"id":"HADA7",
"name":"HADA7",
"metabolites":{
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"h2o_c":1.0,
"td2ec30acylacp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0635 and Rv0636 and Rv0637",
"subsystem":"Mycolic acid pathway"
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{
"id":"NTPP3",
"name":"Nucleoside triphosphate pyrophosphorylase (dctp)",
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"dctp_c":-1.0,
"h2o_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Pyrimidine metabolism"
},
{
"id":"GCCb",
"name":"glycine cleavage complex",
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"dhlpro_c":1.0,
"mlthf_c":1.0,
"nh3_c":1.0,
"thf_c":-1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2211c and Rv1826",
"subsystem":"Glycine, serine and threonine metabolism"
},
{
"id":"PGCM",
"name":"Phosphoglucomutase",
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"g1p_c":1.0,
"g6p_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3068c",
"subsystem":"Glycolysis / Gluconeogenesis"
},
{
"id":"DHDPS",
"name":"dihydrodipicolinate synthase",
"metabolites":{
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"aspsa_c":-1.0,
"h2o_c":2.0,
"pyr_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2753c",
"subsystem":"Lysine biosynthesis"
},
{
"id":"DAPE",
"name":"diaminopimelate epimerase",
"metabolites":{
"26dap_LL_c":-1.0,
"26dap_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2726c",
"subsystem":"Lysine biosynthesis"
},
{
"id":"SDPDS",
"name":"succinyl-diaminopimelate desuccinylase",
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"h2o_c":-1.0,
"sl26da_c":-1.0,
"succ_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1202",
"subsystem":"Lysine biosynthesis"
},
{
"id":"GLU_Dabc",
"name":"T00217a",
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"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"DAG",
"name":"MNXR1417",
"metabolites":{
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"coa_c":1.0,
"h_c":-2.0,
"nad_c":2.0,
"nadh_c":-2.0,
"pa160190_c":-1.0,
"pi_c":1.0,
"ppcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2252",
"subsystem":"Glycerophospholipid metabolism"
},
{
"id":"CDAPPA160190",
"name":"CDP-Diacylglycerol pyrophostatase (C16:0, C19:0)",
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"h2o_c":-1.0,
"pa160190_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2289",
"subsystem":"Glycerophospholipid metabolism"
},
{
"id":"HMGL",
"name":"hydroxymethylglutaryl-CoA lyase",
"metabolites":{
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"accoa_c":1.0,
"hmgcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Butanoate metabolism"
},
{
"id":"FUMAC",
"name":"fumarylacetoacetase",
"metabolites":{
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"acac_c":1.0,
"fum_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Tyrosine metabolism"
},
{
"id":"DMATT",
"name":"dimethylallyltranstransferase",
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"grdp_c":1.0,
"ipdp_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3398c or Rv3383c or Rv2173",
"subsystem":"Terpenoid backbone biosynthesis"
},
{
"id":"MDH",
"name":"malate dehydrogenase",
"metabolites":{
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"mal_c":-1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"oaa_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1240",
"subsystem":"Citrate cycle (TCA cycle)"
},
{
"id":"ADCL",
"name":"4-aminobenzoate synthase",
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"4adcho_c":-1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0812",
"subsystem":"Folate biosynthesis"
},
{
"id":"RIBabc",
"name":"D-ribose transport via ABC system",
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"atp_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0,
"rib__D_c":1.0,
"rib__D_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Transport"
},
{
"id":"THMP",
"name":"thiamin phosphatase",
"metabolites":{
"h2o_c":-1.0,
"pi_c":1.0,
"thm_c":1.0,
"thmmp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cofactor biosynthesis"
},
{
"id":"ABTA",
"name":"4-aminobutyrate transaminase",
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"akg_c":-1.0,
"glu__L_c":1.0,
"sucsal_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2589",
"subsystem":"Alanine, aspartate and glutamate metabolism"
},
{
"id":"SHCHF",
"name":"sirohydrochlorin ferrochelatase",
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"h_c":2.0,
"scl_c":-1.0,
"sheme_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2393",
"subsystem":"Porphyrin and chlorophyll metabolism"
},
{
"id":"FRUpts",
"name":"D-fructose transport via PEP:Pyr PTS",
"metabolites":{
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"fru_e":-1.0,
"pep_c":-1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"IPDAB",
"name":"IPDAB",
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"5ohhipcoa_c":1.0,
"amp_c":1.0,
"atp_c":-1.0,
"coa_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3551 and Rv3552",
"subsystem":"Cholesterol degradation"
},
{
"id":"PGAMT",
"name":"phosphoglucosamine mutase",
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"gam6p_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3068c",
"subsystem":"Amino sugar and nucleotide sugar metabolism"
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{
"id":"MACACI",
"name":"maleylacetoacetate isomerase",
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"4mlacac_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Tyrosine metabolism"
},
{
"id":"PPM1",
"name":"MNXR76028",
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"gdpmann_c":-1.0,
"ppm_c":1.0,
"udcpp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2051c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"TESA7",
"name":"TESA7",
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"h2o_c":-1.0,
"ph4m3k911dhc34acylacp_c":-1.0,
"ph4m3k911dhc34oate_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"TESA6",
"name":"TESA6",
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"h2o_c":-1.0,
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"ph24dm3k911dhc37oate_c":1.0
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"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"TESA5",
"name":"TESA5",
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"h2o_c":-1.0,
"ph24dm3k911dhc35acylacp_c":-1.0,
"ph24dm3k911dhc35oate_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2928",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"BO12",
"name":"BO12",
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"btcoa_c":1.0,
"coa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"hxcoa_c":-1.0,
"nad_c":-1.0,
"nadh_c":1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Beta-oxidation pathway"
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{
"id":"TESA3",
"name":"TESA3",
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"ACP_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2928",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"PYDXS",
"name":"Pyridoxal 5-phosphate synthase",
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"g3p_c":-1.0,
"gln__L_c":-1.0,
"glu__L_c":1.0,
"h2o_c":3.0,
"pi_c":1.0,
"pydx5p_c":1.0,
"ru5p_c":-1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2604c",
"subsystem":"Pyridoxine metabolism"
},
{
"id":"TESA1",
"name":"TESA1",
"metabolites":{
"24dm3k911dhc34acylACP_c":-1.0,
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"ACP_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2928",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"PMDPHT",
"name":"pyrimidine phosphatase",
"metabolites":{
"4r5au_c":1.0,
"5aprbu_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Riboflavin metabolism"
},
{
"id":"GOFUCR",
"name":"GDP-4-oxo-L-fucose reductase",
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"gdpfuc_c":1.0,
"gdpofuc_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1512",
"subsystem":"Galactose metabolism"
},
{
"id":"GDMANE",
"name":"GDP-4-dehydro-6-deoxy-D-mannose epimerase",
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"gdpddman_c":-1.0,
"gdpofuc_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1512",
"subsystem":"Galactose metabolism"
},
{
"id":"G16MTM2",
"name":"Glycolipid 16-alpha-D-mannosyltransferase",
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"Ac1PIM2_c":1.0,
"gdp_c":1.0,
"gdpmann_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2188c",
"subsystem":"Phosphatidyl inositol mannoside biosynthesis"
},
{
"id":"PFK",
"name":"phosphofructokinase",
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"atp_c":-1.0,
"f6p_c":-1.0,
"fdp_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Glycolysis / Gluconeogenesis"
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{
"id":"RIBFLVt",
"name":"MNXR4626",
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"ribflv_e":-1.0
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
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{
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"name":"HADA19",
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"h2o_c":1.0,
"td2ec54acylacp_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0635 and Rv0636 and Rv0637",
"subsystem":"Mycolic acid pathway"
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{
"id":"ICHORS",
"name":"isochorismate synthase",
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"ichor_c":1.0
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3215 or Rv2386c",
"subsystem":"Mycobactin biosynthesis"
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{
"id":"PAPA2",
"name":"PAPA2",
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"pmtcoa_c":-1.0,
"sl659_c":1.0,
"tres_c":-1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3820c",
"subsystem":"Sulfolipid biosynthesis"
},
{
"id":"FUM",
"name":"fumarase",
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"h2o_c":-1.0,
"mal_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1098c",
"subsystem":"Citrate cycle (TCA cycle)"
},
{
"id":"FADD263",
"name":"FADD263",
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"amp_c":1.0,
"phtriACP_c":1.0,
"phtriAMP_c":-1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2930",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"FPRA",
"name":"R01195",
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"fdxox_c":1.0,
"fdxrd_c":-1.0,
"h_c":-1.0,
"nadp_c":-1.0,
"nadph_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3106 or Rv0886",
"subsystem":"Nicotinate and nicotinamide metabolism"
},
{
"id":"CYRDAAT",
"name":"cob(I)yrinic acid a,c-diamide adenosyltransferase",
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"atp_c":-1.0,
"co1dam_c":-1.0,
"h_c":-1.0,
"pppi_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2849c",
"subsystem":"Cofactor biosynthesis"
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{
"id":"FADD262",
"name":"FADD262",
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"phptAMP_c":1.0,
"phpt_c":-1.0,
"ppi_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2930",
"subsystem":"Dimycocerosate ester biosynthesis"
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{
"id":"COabc",
"name":"Cobalt transport via ABC system",
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"atp_c":-1.0,
"cobalt2_c":1.0,
"cobalt2_e":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"IPDDI",
"name":"isopentenyl-diphosphate D-isomerase",
"metabolites":{
"dmpp_c":1.0,
"ipdp_c":-1.0
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1745c",
"subsystem":"Terpenoid backbone biosynthesis"
},
{
"id":"COabc_rev",
"name":"T00175b",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"cobalt2_c":-1.0,
"cobalt2_e":1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"PYK",
"name":"pyruvate kinase",
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"adp_c":-1.0,
"atp_c":1.0,
"pep_c":-1.0,
"pyr_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1617",
"subsystem":"Glycolysis / Gluconeogenesis"
},
{
"id":"SHCHCS3",
"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene 1-carboxylate synthase",
"metabolites":{
"2sephchc_c":-1.0,
"2shchc_c":1.0,
"pyr_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0555",
"subsystem":"Ubiquinone and other terpenoid-quinone biosynthesis"
},
{
"id":"PGL",
"name":"6-phosphogluconolactonase",
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"6pgl_c":-1.0,
"h2o_c":-1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1445c",
"subsystem":"Pentose phosphate pathway"
},
{
"id":"HACD9",
"name":"3-hydroxyacyl-CoA dehydrogenase (2-Methylacetoacetyl-CoA)",
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"3hmbcoa_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3774 or Rv1144",
"subsystem":"Valine, leucine and isoleucine degradation"
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{
"id":"ATPS",
"name":"ATPase, cytosolic",
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"atp_c":-1.0,
"h2o_c":-1.0,
"pi_e":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0934 and Rv0936 and Rv0935 and Rv0933) or (Rv0932c and Rv0930 and Rv0929 and Rv0933) or (Rv0928 and Rv0930 and Rv0928 and Rv0933) or Rv0545c or Rv2281",
"subsystem":"Transport"
},
{
"id":"PIabc",
"name":"phosphate transport via ABC system",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"pi_c":2.0,
"pi_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0934 and Rv0936 and Rv0935 and Rv0933) or (Rv0932c and Rv0930 and Rv0929 and Rv0933) or (Rv0928 and Rv0930 and Rv0928 and Rv0933) or Rv0545c or Rv2281",
"subsystem":"Transport"
},
{
"id":"KSH",
"name":"R09860",
"metabolites":{
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"andrs14dn317dn_c":-1.0,
"h2o_c":1.0,
"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0,
"o2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3526 and Rv3571",
"subsystem":"Cholesterol degradation"
},
{
"id":"GND",
"name":"phosphogluconate dehydrogenase",
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"6pgc_c":-1.0,
"co2_c":1.0,
"h_c":1.0,
"nadp_c":-1.0,
"nadph_c":1.0,
"ru5p_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1122 or Rv1844c",
"subsystem":"Pentose phosphate pathway"
},
{
"id":"CD2abc1_rev",
"name":"MNXR19981",
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"atp_c":-1.0,
"cd2_c":-1.0,
"cd2_e":1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1469",
"subsystem":"Transport"
},
{
"id":"CD2abc1",
"name":"cadmium transport out via ABC system",
"metabolites":{
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"atp_c":-1.0,
"cd2_c":1.0,
"cd2_e":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1469",
"subsystem":"Transport"
},
{
"id":"PTHIO1",
"name":"PTHIO1",
"metabolites":{
"24dm3k911dhc34oate_c":-1.0,
"co2_c":1.0,
"phthdlC33_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"HCYSMT",
"name":"homocysteine S-methyltransferase",
"metabolites":{
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"amet_c":-1.0,
"hcys__L_c":-1.0,
"met__L_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2458",
"subsystem":"Cysteine and methionine metabolism"
},
{
"id":"2PLS",
"name":"2-phospho-L-lactate synthase",
"metabolites":{
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"gdp_c":1.0,
"gtp_c":-1.0,
"lac__L_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cofactor biosynthesis"
},
{
"id":"GSNt2",
"name":"guanosine transport in via proton symport",
"metabolites":{
"gsn_c":1.0,
"gsn_e":-1.0,
"h_c":-1.0,
"h_e":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"PAPSR",
"name":"phosphoadenylyl-sulfate reductase (thioredoxin)",
"metabolites":{
"adp_c":1.0,
"paps_c":-1.0,
"so3_c":1.0,
"trdox_c":1.0,
"trdrd_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2392",
"subsystem":"Sulfur metabolism"
},
{
"id":"ALDD2x",
"name":"aldehyde dehydrogenase (acetaldehyde, NAD)",
"metabolites":{
"ac_c":1.0,
"acald_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0458 or Rv0147 or Rv0768",
"subsystem":"Glycolysis / Gluconeogenesis"
},
{
"id":"IPPMIa",
"name":"3-isopropylmalate dehydratase",
"metabolites":{
"2ippm_c":1.0,
"3c2hmp_c":-1.0,
"h2o_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2988c and Rv2987c",
"subsystem":"Valine, leucine and isoleucine biosynthesis"
},
{
"id":"IPPMIb",
"name":"2-isopropylmalate hydratase",
"metabolites":{
"2ippm_c":-1.0,
"3c3hmp_c":1.0,
"h2o_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2988c and Rv2987c",
"subsystem":"Valine, leucine and isoleucine biosynthesis"
},
{
"id":"CYSabc_rev",
"name":"T00097b",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"cys__L_c":-1.0,
"cys__L_e":1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"PTHIO5",
"name":"PTHIO5",
"metabolites":{
"phthdlC32_c":-0.04,
"phthdlC33_c":-0.33,
"phthdlC34_c":-0.06,
"phthdlC35_c":-0.57,
"phthdl_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"MBTA1",
"name":"MBTA1",
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"h_c":-1.0,
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"salc_c":-1.0,
"thr__L_c":-1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"Rv2384 and Rv2383c and Rv2382c and Rv2381c and Rv2380c and Rv2379c and Rv2377c",
"subsystem":"Mycobactin biosynthesis"
},
{
"id":"HADA21",
"name":"HADA21",
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"h2o_c":1.0,
"td2ec58acylacp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS29",
"name":"FAS29",
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},
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"subsystem":"Mycolic acid pathway"
},
{
"id":"INHA4",
"name":"MNXR64022",
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},
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"subsystem":"Mycolic acid pathway"
},
{
"id":"INHA5",
"name":"MNXR64054",
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},
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"subsystem":"Mycolic acid pathway"
},
{
"id":"INHA6",
"name":"MNXR64042",
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},
"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Mycolic acid pathway"
},
{
"id":"INHA7",
"name":"MNXR64032",
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"nadh_c":-1.0,
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},
"lower_bound":0.0,
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"subsystem":"Mycolic acid pathway"
},
{
"id":"INHA1",
"name":"INHA1",
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"nadh_c":-1.0,
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},
"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Mycolic acid pathway"
},
{
"id":"INHA2",
"name":"INHA2",
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"nadh_c":-1.0,
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},
"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Mycolic acid pathway"
},
{
"id":"INHA3",
"name":"INHA3",
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"h_c":-1.0,
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},
"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Mycolic acid pathway"
},
{
"id":"G16MTM1",
"name":"Glycolipid 1,6-alpha-D-mannosyltransferase",
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"gdp_c":1.0,
"gdpmann_c":-1.0,
"ptd1ino160190_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2610c",
"subsystem":"Phosphatidyl inositol mannoside biosynthesis"
},
{
"id":"VIUB",
"name":"VIUB",
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"atp_c":-1.0,
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"h2o_c":-1.0,
"mcbtm_c":-0.001,
"mcbts_c":-0.0005,
"mcbtt_c":-0.0005,
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},
"lower_bound":0.0,
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"subsystem":"Transport"
},
{
"id":"FAMPL1",
"name":"Fatty Acid Ligase AMP (mycolic acid)",
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},
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},
{
"id":"INHA8",
"name":"MNXR64044",
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},
{
"id":"INHA9",
"name":"MNXR64057",
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"lower_bound":0.0,
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"subsystem":"Mycolic acid pathway"
},
{
"id":"H2Ot",
"name":"H2O transport via diffusion",
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"h2o_c":1.0,
"h2o_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"G1PACT",
"name":"glucosamine-1-phosphate N-acetyltransferase",
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"acgam1p_c":1.0,
"coa_c":1.0,
"gam1p_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Amino sugar and nucleotide sugar metabolism"
},
{
"id":"MANpts",
"name":"D-mannose transport via PEP:Pyr PTS",
"metabolites":{
"man6p_c":1.0,
"man_e":-1.0,
"pep_c":-1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"Clabc",
"name":"MNXR19971",
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},
"lower_bound":0.0,
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"subsystem":"Transport"
},
{
"id":"Clabc_rev",
"name":"MNXR19971",
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"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"PKS33",
"name":"PKS33",
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"lower_bound":0.0,
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"subsystem":"Lipid metabolism"
},
{
"id":"PKS32",
"name":"PKS32",
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},
{
"id":"PKS31",
"name":"PKS31",
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"subsystem":"Lipid metabolism"
},
{
"id":"PUNP4",
"name":"purine-nucleoside phosphorylase (Deoxyguanosine)",
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"lower_bound":-1000.0,
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"gene_reaction_rule":"",
"subsystem":"Purine metabolism"
},
{
"id":"KASB1",
"name":"KASB1",
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"lower_bound":0.0,
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{
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"name":"FAS69",
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"lower_bound":0.0,
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{
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"name":"MNXR90580",
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"lower_bound":0.0,
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{
"id":"KASB2",
"name":"KASB2",
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{
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"name":"MNXR90576",
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{
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{
"id":"KASB7",
"name":"MNXR90577",
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{
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},
{
"id":"IPPS",
"name":"2-isopropylmalate synthase",
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"coa_c":1.0,
"h2o_c":-1.0
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"lower_bound":0.0,
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{
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"name":"MNXR90592",
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"subsystem":"Mycolic acid pathway"
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{
"id":"FAS62",
"name":"FAS62",
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"nadph_c":-1.0
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"lower_bound":0.0,
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{
"id":"FAS63",
"name":"FAS63",
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{
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"name":"FAS64",
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{
"id":"FAS65",
"name":"FAS65",
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"lower_bound":0.0,
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"subsystem":"Mycolic acid pathway"
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{
"id":"FAS66",
"name":"FAS66",
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"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Mycolic acid pathway"
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{
"id":"FAS67",
"name":"FAS67",
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"coa_c":-1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Mycolic acid pathway"
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{
"id":"LYSabc",
"name":"L-lysine transport via ABC system",
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"atp_c":-1.0,
"h2o_c":-1.0,
"lys__L_c":1.0,
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},
"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Transport"
},
{
"id":"GLYOX",
"name":"hydroxyacylglutathione hydrolase",
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"h2o_c":-1.0,
"lac__D_c":1.0,
"lgt__S_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2581c or Rv0634c",
"subsystem":"Glyoxal pathway"
},
{
"id":"MG2abc_rev",
"name":"T00305b",
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"mg2_c":-1.0,
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv0362 or Rv0107c or Rv1239c or Rv1811",
"subsystem":"Transport"
},
{
"id":"PRAMPC",
"name":"phosphoribosyl-AMP cyclohydrolase",
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},
"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Histidine metabolism"
},
{
"id":"IG3PS",
"name":"Imidazole-glycerol-3-phosphate synthase",
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"lower_bound":0.0,
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"subsystem":"Histidine metabolism"
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{
"id":"ATPPRT",
"name":"ATP phosphoribosyltransferase",
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"prpp_c":-1.0
},
"lower_bound":0.0,
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"subsystem":"Histidine metabolism"
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{
"id":"HPDCAt",
"name":"fatty acid transport via diffusion",
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},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"PRATPP",
"name":"phosphoribosyl-ATP pyrophosphatase",
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"prbatp_c":-1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"Rv2122c",
"subsystem":"Histidine metabolism"
},
{
"id":"HISTD",
"name":"histidinol dehydrogenase",
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},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1599",
"subsystem":"Histidine metabolism"
},
{
"id":"NIabc_rev",
"name":"T00291b",
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},
"lower_bound":0.0,
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"gene_reaction_rule":"Rv2856",
"subsystem":"Transport"
},
{
"id":"SAMOX",
"name":"SAMOX",
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},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cofactor biosynthesis"
},
{
"id":"AHCYSNS",
"name":"S-adenosylhomocysteine nucleosidase",
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"h2o_c":-1.0,
"rhcys_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0091",
"subsystem":"Cysteine and methionine metabolism"
},
{
"id":"FADE324",
"name":"FADE324",
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"lower_bound":0.0,
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},
{
"id":"ACCOAC",
"name":"acetyl-CoA carboxylase",
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"atp_c":-1.0,
"h_c":-1.0,
"hco3_c":-1.0,
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"upper_bound":1000.0,
"gene_reaction_rule":"Rv3285 and Rv2247",
"subsystem":"Lipid metabolism"
},
{
"id":"GMAND",
"name":"GDP-D-mannose dehydratase",
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"gdpmann_c":-1.0,
"h2o_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0112 or Rv1511",
"subsystem":"Peptidoglycan and lipopolysaccharide biosynthesis"
},
{
"id":"FABD3",
"name":"FABD3",
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"coa_c":-1.0,
"ocACP_c":-1.0,
"stcoa_c":1.0
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"lower_bound":-1000.0,
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"gene_reaction_rule":"(Rv2243 or Rv0649) and Rv2244",
"subsystem":"Lipid metabolism"
},
{
"id":"ATPS4r",
"name":"ATP synthase (four protons for one ATP)",
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"h2o_c":1.0,
"h_c":3.0,
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"pi_c":-1.0
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"lower_bound":0.0,
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"subsystem":"Respiratory chain"
},
{
"id":"PYRt2",
"name":"pyruvate transport in via proton symport",
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"h_e":1.0,
"pyr_c":1.0,
"pyr_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
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{
"id":"NTPP1",
"name":"Nucleoside triphosphate pyrophosphorylase (dgtp)",
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"dgtp_c":-1.0,
"h2o_c":-1.0,
"ppi_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Purine metabolism"
},
{
"id":"PTTPDIM",
"name":"PTTPDIM",
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"pttpdima_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2951c",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"FABG3",
"name":"FABG3",
"metabolites":{
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"nadph_c":-1.0
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv1483 or Rv1350 or Rv2002 or Rv0242c or Rv2766c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FABG1",
"name":"FABG1",
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"nadph_c":-1.0
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"lower_bound":0.0,
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"subsystem":"Mycolic acid pathway"
},
{
"id":"FABG6",
"name":"FABG6",
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"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv1483 or Rv1350 or Rv2002 or Rv0242c or Rv2766c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FABG7",
"name":"FABG7",
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"nadph_c":-1.0
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv1483 or Rv1350 or Rv2002 or Rv0242c or Rv2766c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FABG4",
"name":"FABG4",
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"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv1483 or Rv1350 or Rv2002 or Rv0242c or Rv2766c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FABG5",
"name":"FABG5",
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"nadp_c":1.0,
"nadph_c":-1.0
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv1483 or Rv1350 or Rv2002 or Rv0242c or Rv2766c",
"subsystem":"Mycolic acid pathway"
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{
"id":"PDIMBT",
"name":"MMPL72",
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv2942 and Rv2936 and Rv2937 and Rv2938 and Rv2945c",
"subsystem":"Dimycocerosate ester biosynthesis"
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{
"id":"PPDIMAT",
"name":"ppdima translocase",
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"lower_bound":0.0,
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"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"FABG8",
"name":"FABG8",
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"nadph_c":-1.0
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv1483 or Rv1350 or Rv2002 or Rv0242c or Rv2766c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"PDIMAT",
"name":"pdima translocase",
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"pdimam_c":1.0
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv2942 and Rv2936 and Rv2937 and Rv2938 and Rv2945c",
"subsystem":"Dimycocerosate ester biosynthesis"
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{
"id":"FAS40",
"name":"FAS40",
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"subsystem":"Mycolic acid pathway"
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{
"id":"PPDIMBT",
"name":"MMPL74",
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"ppdimbm_c":1.0
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv2942 and Rv2936 and Rv2937 and Rv2938 and Rv2945c",
"subsystem":"Dimycocerosate ester biosynthesis"
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{
"id":"FADD3420",
"name":"FADD3420",
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"hxcoa_c":1.0,
"ppi_c":1.0
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{
"id":"HSDy",
"name":"homoserine dehydrogenase (NADPH)",
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"subsystem":"Glycine, serine and threonine metabolism"
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{
"id":"SER_AL",
"name":"L-serine ammonia-lyase",
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"pyr_c":1.0,
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"lower_bound":0.0,
"upper_bound":1000.0,
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{
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"name":"threonine synthase",
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"pi_c":1.0,
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{
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"name":"homoserine kinase",
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"subsystem":"Glycine, serine and threonine metabolism"
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{
"id":"MMM2",
"name":"Methylmalonyl-CoA mutase",
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"lower_bound":-1000.0,
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"gene_reaction_rule":"Rv1492 and Rv1493",
"subsystem":"Lipid metabolism"
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{
"id":"PC6YM",
"name":"precorrin-6Y C5,15-methyltransferase (decarboxylating)",
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"subsystem":"Cofactor biosynthesis"
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{
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"name":"PPSD3",
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv2934 and Rv2953",
"subsystem":"Dimycocerosate ester biosynthesis"
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{
"id":"PHBADB",
"name":"PHBADB",
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"subsystem":"p-HBAD biosynthesis"
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{
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"name":"PPSD1",
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"subsystem":"Dimycocerosate ester biosynthesis"
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{
"id":"PHBADC",
"name":"PHBADC",
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{
"id":"PAPA1",
"name":"PAPA1",
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"lower_bound":0.0,
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"subsystem":"Sulfolipid biosynthesis"
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{
"id":"FAS70",
"name":"FAS70",
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{
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"tre_c":1.0
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv3804c and Rv1886c and Rv0129c and Rv3803c",
"subsystem":"Mycolic acid pathway"
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{
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"name":"glucan 1,4-alpha-glucosidase",
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"h2o_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Starch and sucrose metabolism"
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{
"id":"CITabc",
"name":"citrate transport via ABC system",
"metabolites":{
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"cit_c":1.0,
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"lower_bound":0.0,
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"subsystem":"Transport"
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{
"id":"ECHA193",
"name":"ECHA193",
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"hcholc3coa_c":1.0
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3516 or Rv3538",
"subsystem":"Cholesterol degradation"
},
{
"id":"GALUi",
"name":"UTP-glucose-1-phosphate uridylyltransferase (irreversible)",
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"ppi_c":1.0,
"udpg_c":1.0,
"utp_c":-1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0993",
"subsystem":"Pentose and glucuronate interconversions"
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{
"id":"PHBADA",
"name":"PHBADA",
"metabolites":{
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"dtdprmn_c":-1.0,
"rppdima_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2962c",
"subsystem":"p-HBAD biosynthesis"
},
{
"id":"4ABUTabc",
"name":"MNXR30199",
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"atp_c":-1.0,
"h2o_c":-1.0,
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv0522",
"subsystem":"Transport"
},
{
"id":"PROabc_rev",
"name":"T00148b",
"metabolites":{
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"pi_c":1.0,
"pro_c":-1.0,
"pro_e":1.0
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv3756c and Rv3757c and Rv3758c and Rv3759c",
"subsystem":"Transport"
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{
"id":"GSEALD",
"name":"GSEALD",
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"h_c":-1.0,
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Porphyrin metabolism"
},
{
"id":"GALKr",
"name":"galactokinase",
"metabolites":{
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"atp_c":-1.0,
"gal1p_c":1.0,
"gal_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0620",
"subsystem":"Galactose metabolism"
},
{
"id":"ADEt2",
"name":"adenine transport in via proton symport",
"metabolites":{
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"h_c":-1.0,
"h_e":1.0
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"G3PD1ir",
"name":"glycerol-3-phosphate dehydrogenase (NAD)",
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"h_c":-1.0,
"nad_c":1.0,
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2982c or Rv0564c",
"subsystem":"Glycerophospholipid metabolism"
},
{
"id":"GHMT2r",
"name":"glycine hydroxymethyltransferase, reversible",
"metabolites":{
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"mlthf_c":1.0,
"ser_c":-1.0,
"thf_c":-1.0
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1093 or Rv0070c",
"subsystem":"Glycine, serine and threonine metabolism"
},
{
"id":"DB4PS",
"name":"3,4-Dihydroxy-2-butanone-4-phosphate synthase",
"metabolites":{
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"for_c":1.0,
"ru5p_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1940",
"subsystem":"Riboflavin metabolism"
},
{
"id":"GTPCII2",
"name":"GTP cyclohydrolase II (25drapp)",
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"ppi_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1415 or Rv1940",
"subsystem":"Riboflavin metabolism"
},
{
"id":"GCALDD",
"name":"Glycolaldehyde dehydrogenase",
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"glyclt_c":1.0,
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"h_c":1.0,
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"nadh_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Glyoxylate and dicarboxylate metabolism"
},
{
"id":"TRDR",
"name":"thioredoxin reductase (NADPH)",
"metabolites":{
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"nadph_c":-1.0,
"trdox_c":-1.0,
"trdrd_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3913",
"subsystem":"Pyrimidine metabolism"
},
{
"id":"PPSC4",
"name":"PPSC4",
"metabolites":{
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"h_c":-2.0,
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"nad_c":2.0,
"nadh_c":-2.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2933",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"BGLA",
"name":"beta-glucosidase",
"metabolites":{
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"glc__D_c":2.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0186",
"subsystem":"Starch and sucrose metabolism"
},
{
"id":"AGPGLCN",
"name":"AGPGLCN",
"metabolites":{
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"decd_tb_c":1.0,
"peptido_TB_c":-30.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Arabinogalactan peptidoglycan biosynthesis"
},
{
"id":"XYLK",
"name":"xylulokinase",
"metabolites":{
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"atp_c":-1.0,
"rbl_c":-1.0,
"xu5p_c":1.0
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{
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{
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"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Beta-oxidation pathway"
},
{
"id":"PROP",
"name":"MNXR14718",
"metabolites":{
"2obut_c":-2.0,
"co2_c":2.0,
"h2o_c":2.0,
"o2_c":-1.0,
"pi_c":-2.0,
"ppap_c":2.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Propanoate metabolism"
},
{
"id":"L2AADPt",
"name":"T00956",
"metabolites":{
"L2aadp_c":1.0,
"L2aadp_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"CYCLY1",
"name":"MNXR31648",
"metabolites":{
"cgly_c":1.0,
"glu__L_c":1.0,
"gthrd_c":-1.0,
"h2o_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cysteine and methionine metabolism"
},
{
"id":"NTRIRx",
"name":"nitrite reductase (NADH)",
"metabolites":{
"h2o_c":1.0,
"h_c":-3.0,
"nad_c":3.0,
"nadh_c":-3.0,
"nh4oh_c":1.0,
"no2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0252 and Rv0253",
"subsystem":"Nitrogen metabolism"
},
{
"id":"BO1",
"name":"BO1",
"metabolites":{
"accoa_c":1.0,
"coa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"hexccoa_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"occcoa_c":-1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Beta-oxidation pathway"
},
{
"id":"R05219",
"name":"R05219",
"metabolites":{
"ac_c":1.0,
"ahcys_c":1.0,
"amet_c":-1.0,
"h2o_c":-1.0,
"pre5_c":-1.0,
"pre6a_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cofactor biosynthesis"
},
{
"id":"BO3",
"name":"BO3",
"metabolites":{
"accoa_c":1.0,
"behencoa_c":1.0,
"coa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"lgnccoa_c":-1.0,
"nad_c":-1.0,
"nadh_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Beta-oxidation pathway"
},
{
"id":"BO2",
"name":"BO2",
"metabolites":{
"accoa_c":1.0,
"coa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"hexccoa_c":-1.0,
"lgnccoa_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Beta-oxidation pathway"
},
{
"id":"BO5",
"name":"BO5",
"metabolites":{
"accoa_c":1.0,
"arachcoa_c":-1.0,
"coa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"stcoa_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Beta-oxidation pathway"
},
{
"id":"BO4",
"name":"BO4",
"metabolites":{
"accoa_c":1.0,
"arachcoa_c":1.0,
"behencoa_c":-1.0,
"coa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Beta-oxidation pathway"
},
{
"id":"BO7",
"name":"BO7",
"metabolites":{
"accoa_c":1.0,
"coa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"pmtcoa_c":-1.0,
"tdcoa_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Beta-oxidation pathway"
},
{
"id":"BO6",
"name":"BO6",
"metabolites":{
"accoa_c":1.0,
"coa_c":-1.0,
"fad_c":-1.0,
"fadh2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"pmtcoa_c":1.0,
"stcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv0131c or Rv0154c or Rv0215c or Rv0231 or Rv0244c or Rv0271c or Rv0400c or Rv0752c or Rv0873 or Rv0972c or Rv0975c or Rv1467c or Rv1679 or Rv1933c or Rv1934c or Rv2724c or Rv2789c or Rv3061c or Rv3139 or Rv3140 or Rv3274c or Rv3562 or Rv3563 or Rv3564 or Rv3573c or Rv3761c or Rv3797 or Rv0672 or Rv2500c) and (Rv0222 or Rv0456c or Rv0632c or Rv0673 or Rv0675 or Rv0905 or Rv0971c or Rv1070c or Rv1071c or Rv1141c or Rv1142c or Rv1472 or Rv1935c or Rv2486 or Rv2679 or Rv2831 or Rv3039c or Rv3373 or Rv3374 or Rv3516 or Rv3774) and (Rv0468 or Rv0860 or Rv1715 or Rv1912c or Rv3141) and (Rv0243 or Rv0859 or Rv1074c or Rv1323 or Rv3556c)",
"subsystem":"Beta-oxidation pathway"
},
{
"id":"FADD281",
"name":"FADD281",
"metabolites":{
"atp_c":-1.0,
"ocdcaAMP_c":1.0,
"ocdca_c":-1.0,
"ppi_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1345",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"FADD283",
"name":"FADD283",
"metabolites":{
"ACP_c":-1.0,
"amp_c":1.0,
"ocACP_c":1.0,
"ocdcaAMP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1345 and Rv1344",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"PDIMA",
"name":"PDIMA",
"metabolites":{
"ahcys_c":1.0,
"amet_c":-1.0,
"ppdima_c":1.0,
"pttpdima_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2952",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"HIPB",
"name":"HIPB",
"metabolites":{
"5ohhipcoa_c":1.0,
"h_c":-1.0,
"hipcoa_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cholesterol degradation"
},
{
"id":"HEXTT",
"name":"trans-hexaprenyltranstransferase",
"metabolites":{
"hepdp_c":1.0,
"hexdp_c":-1.0,
"ipdp_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0562",
"subsystem":"Menaquinone biosynthesis"
},
{
"id":"INHA18",
"name":"MNXR64019",
"metabolites":{
"dopentacon_c":1.0,
"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0,
"td2ec52acylacp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1484",
"subsystem":"Mycolic acid pathway"
},
{
"id":"HIPA",
"name":"HIPA",
"metabolites":{
"5ohhip_c":1.0,
"h_c":-1.0,
"hip_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cholesterol degradation"
},
{
"id":"INHA16",
"name":"MNXR64083",
"metabolites":{
"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0,
"octatetcACP_c":1.0,
"td2ec48acylacp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1484",
"subsystem":"Mycolic acid pathway"
},
{
"id":"INHA17",
"name":"MNXR64089",
"metabolites":{
"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0,
"ptcnylACP_c":1.0,
"td2ec50acylacp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1484",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FADE323",
"name":"FADE323",
"metabolites":{
"ACP_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"mmeroacidcyc2ACP_c":-1.0,
"mmeroacidcyc2AMP_c":1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3801c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"INHA15",
"name":"MNXR64078",
"metabolites":{
"h_c":-1.0,
"hextetcACP_c":1.0,
"nad_c":1.0,
"nadh_c":-1.0,
"td2ec46acylacp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1484",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAMPL5",
"name":"Fatty Acid Ligase AMP (mycolic acid)",
"metabolites":{
"ACP_c":1.0,
"CKC60MEROACYLACP_c":-1.0,
"CKC60MEROACYLAMP_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3801c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"MOBDabc_rev",
"name":"T06232b",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"mobd_c":-1.0,
"mobd_e":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1857 and Rv1858 and Rv1859",
"subsystem":"Transport"
},
{
"id":"MOBDabc",
"name":"molybdate transport via ABC system",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"mobd_c":1.0,
"mobd_e":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1857 and Rv1858 and Rv1859",
"subsystem":"Transport"
},
{
"id":"INHA11",
"name":"MNXR64015",
"metabolites":{
"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0,
"octatriacACP_c":1.0,
"td2ec38acylacp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1484",
"subsystem":"Mycolic acid pathway"
},
{
"id":"BKDC2",
"name":"BKDC2",
"metabolites":{
"3mbdhl_c":-1.0,
"coa_c":-1.0,
"dhlam_c":1.0,
"ivcoa_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2495c",
"subsystem":"Lipid metabolism"
},
{
"id":"MCITD",
"name":"2-methylcitrate dehydratase",
"metabolites":{
"2mcacn_c":1.0,
"2mcit_c":-1.0,
"h2o_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1130",
"subsystem":"Propanoate metabolism"
},
{
"id":"BKDC1",
"name":"BKDC1",
"metabolites":{
"2mbcoa_c":1.0,
"2mbdhl_c":-1.0,
"coa_c":-1.0,
"dhlam_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2495c",
"subsystem":"Lipid metabolism"
},
{
"id":"CBPS",
"name":"carbamoyl-phosphate synthase (glutamine-hydrolysing)",
"metabolites":{
"adp_c":2.0,
"atp_c":-2.0,
"cbp_c":1.0,
"gln__L_c":-1.0,
"glu__L_c":1.0,
"h2co3_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1383 and Rv1384",
"subsystem":"Pyrimidine metabolism"
},
{
"id":"HSERTA",
"name":"homoserine O-trans-acetylase",
"metabolites":{
"accoa_c":-1.0,
"achms_c":1.0,
"coa_c":1.0,
"hom_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3341",
"subsystem":"Cysteine and methionine metabolism"
},
{
"id":"SEPHCHCS",
"name":"2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase",
"metabolites":{
"2sephchc_c":1.0,
"akg_c":-1.0,
"co2_c":1.0,
"ichor_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0555",
"subsystem":"Ubiquinone and other terpenoid-quinone biosynthesis"
},
{
"id":"FCOAH2",
"name":"formyl coa hydrolase",
"metabolites":{
"coa_c":1.0,
"for_c":1.0,
"forcoa_c":-1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Glyoxylate and dicarboxylate metabolism"
},
{
"id":"GLYCLTt",
"name":"Glycolate transport via diffusion",
"metabolites":{
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{
"id":"TRESULT",
"name":"trehalose sulfotransferase",
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"tre_c":-1.0,
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{
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{
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{
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{
"id":"FRUpts2",
"name":"Fructose transport via PEP:Pyr PTS (f6p generating)",
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{
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{
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{
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{
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{
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{
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{
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{
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{
"id":"ZNabc_rev",
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{
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{
"id":"RBK",
"name":"ribokinase",
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{
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{
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{
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"name":"calcium transport in/out via proton antiporter",
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
"id":"Kabc",
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{
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{
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{
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{
"id":"DAGD",
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"lower_bound":0.0,
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"gene_reaction_rule":"",
"subsystem":"Lipid metabolism"
},
{
"id":"NADH5",
"name":"NADH dehydrogenase (ubiquinone-8 )",
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"lower_bound":0.0,
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"subsystem":"respiratory chain"
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{
"id":"GLYt2r",
"name":"glycine reversible transport via proton symport",
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},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1704c",
"subsystem":"Transport"
},
{
"id":"SERt2r",
"name":"L-serine reversible transport via proton symport",
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"ser_c":1.0,
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},
"lower_bound":-1000.0,
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"subsystem":"Transport"
},
{
"id":"MOEA1",
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"lower_bound":0.0,
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"subsystem":"Cofactor biosynthesis"
},
{
"id":"DALAt2r",
"name":"D-alanine transport via proton symport",
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"h_c":-1.0,
"h_e":1.0
},
"lower_bound":-1000.0,
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},
{
"id":"ALAabc",
"name":"T00041a",
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{
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{
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{
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{
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{
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"name":"(S)-Methylmalonate semialdehyde:NAD+ oxidoreductase (CoA-propanoylating)",
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{
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{
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{
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{
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{
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{
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},
{
"id":"GLUPRT",
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"subsystem":"Purine metabolism"
},
{
"id":"THFOR2",
"name":"5,6,7,8-Tetrahydrofolate:NADP+ oxidoreductase",
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{
"id":"PTAr",
"name":"phosphotransacetylase",
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"subsystem":"Lipid metabolism"
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{
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"name":"PPSA4",
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"subsystem":"Dimycocerosate ester biosynthesis"
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{
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"name":"FADD3417",
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{
"id":"FABD9",
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
"id":"HADA18",
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv0635 and Rv0636 and Rv0637",
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{
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"lower_bound":0.0,
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"subsystem":"Arginine and proline metabolism"
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{
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"name":"Hexadecanoate (n-C16:0) transport in via uniport",
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"lower_bound":-1000.0,
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"gene_reaction_rule":"",
"subsystem":"Transport"
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{
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"name":"CYP3",
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"lower_bound":0.0,
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"subsystem":"Cholesterol degradation"
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{
"id":"MG2abc",
"name":"magnesium transport via ABC system",
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{
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"name":"o2 transport (diffusion)",
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"lower_bound":-1000.0,
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{
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{
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"subsystem":"Cholesterol degradation"
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{
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{
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"name":"cob(I)alamin adenosyltransferase",
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"lower_bound":-1000.0,
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"gene_reaction_rule":"",
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{
"id":"OCOAT1",
"name":"3-oxoacid CoA-transferase (Succinyl-CoA: acetoacetate)",
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"acac_c":-1.0,
"succ_c":1.0,
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"subsystem":"Fatty acid biosynthesis"
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{
"id":"ACBIPGT",
"name":"Adenosyl cobinamide phosphate guanyltransferase",
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"lower_bound":0.0,
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"gene_reaction_rule":"",
"subsystem":"Cofactor biosynthesis"
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{
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"gene_reaction_rule":"",
"subsystem":"Dimycocerosate ester biosynthesis"
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{
"id":"CS",
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"oaa_c":-1.0
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"lower_bound":0.0,
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"subsystem":"Citrate cycle (TCA cycle)"
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{
"id":"OPAH",
"name":"5-Oxoproline amidohydrolase (ATP-hydrolysing)",
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"lower_bound":-1000.0,
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"gene_reaction_rule":"Rv0266c",
"subsystem":"Glutathione metabolism"
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{
"id":"DXPS",
"name":"1-deoxy-D-xylulose 5-phosphate synthase",
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"gene_reaction_rule":"Rv3379c or Rv2682c",
"subsystem":"Terpenoid backbone biosynthesis"
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{
"id":"SUCBZS",
"name":"O-succinylbenzoate-CoA synthase",
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"sucbz_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Ubiquinone and other terpenoid-quinone biosynthesis"
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{
"id":"TMMYCO",
"name":"TMMYCO",
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"tre6mmp_c":1.0,
"tre6p_c":-1.0
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv1288 or Rv0519c or Rv0774c",
"subsystem":"Mycolic acid pathway"
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{
"id":"FADD29",
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv0035 or Rv0099 or Rv0119 or Rv0166 or Rv0214 or Rv0270 or Rv0404 or Rv0551c or Rv0852 or Rv1058 or Rv1185c or Rv1193 or Rv1206 or Rv1427c or Rv1521 or Rv1529 or Rv1549 or Rv1550 or Rv1750c or Rv1925 or Rv2187 or Rv2505c or Rv2590 or Rv2930 or Rv2941 or Rv2948c or Rv2950c or Rv3089 or Rv3506 or Rv3513c or Rv3515c or Rv3561 or Rv3801c or Rv3826",
"subsystem":"Lipid metabolism"
},
{
"id":"GLUabc_rev",
"name":"T00025b",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"glu__L_c":-1.0,
"glu__L_e":1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"GAPD",
"name":"glyceraldehyde-3-phosphate dehydrogenase",
"metabolites":{
"13dpg_c":1.0,
"g3p_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"pi_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1436",
"subsystem":"Glycolysis / Gluconeogenesis"
},
{
"id":"MMAA31",
"name":"MNXR88680",
"metabolites":{
"ahcys_c":1.0,
"amet_c":-1.0,
"cd37mhc57acylACP_c":-1.0,
"cd37mhmc58acylACP_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0643c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FACOAL200",
"name":"fatty-acid--CoA ligase",
"metabolites":{
"amp_c":1.0,
"arach_c":-1.0,
"arachcoa_c":1.0,
"atp_c":-1.0,
"coa_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0035 or Rv0099 or Rv0119 or Rv0166 or Rv0214 or Rv0270 or Rv0404 or Rv0551c or Rv0852 or Rv1058 or Rv1185c or Rv1193 or Rv1206 or Rv1427c or Rv1521 or Rv1529 or Rv1549 or Rv1550 or Rv1750c or Rv1925 or Rv2187 or Rv2505c or Rv2590 or Rv2930 or Rv2941 or Rv2948c or Rv2950c or Rv3089 or Rv3506 or Rv3513c or Rv3515c or Rv3561 or Rv3801c or Rv3826",
"subsystem":"Lipid metabolism"
},
{
"id":"26DAP_LLabc",
"name":"T00666a",
"metabolites":{
"26dap_LL_c":1.0,
"26dap_LL_e":-1.0,
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"MALTabc_rev",
"name":"T00208b",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"malt_c":-1.0,
"malt_e":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv2316 and Rv2317 and Rv2318) or (Rv1235 and Rv1236 and Rv1237 and Rv1238) or (Rv2038c and Rv2039c and Rv2040c and Rv2041c)",
"subsystem":"Transport"
},
{
"id":"MALTabc",
"name":"maltose transport via ABC system",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"malt_c":1.0,
"malt_e":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv2316 and Rv2317 and Rv2318) or (Rv1235 and Rv1236 and Rv1237 and Rv1238) or (Rv2038c and Rv2039c and Rv2040c and Rv2041c)",
"subsystem":"Transport"
},
{
"id":"RBFK",
"name":"riboflavin kinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"fmn_c":1.0,
"ribflv_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2786c",
"subsystem":"Riboflavin metabolism"
},
{
"id":"FAS61",
"name":"FAS61",
"metabolites":{
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"co2_c":1.0,
"malc24aclACPFAS_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"CHLabc",
"name":"choline transport via ABC system",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"chol_c":1.0,
"chol_e":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3756c and Rv3757c and Rv3758c and Rv3759c",
"subsystem":"Transport"
},
{
"id":"BSORy",
"name":"Biotin sulfoxide reductase",
"metabolites":{
"btn_c":1.0,
"btnso_c":-1.0,
"h2o_c":1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1442",
"subsystem":"Cofactor biosynthesis"
},
{
"id":"PROabc",
"name":"L-proline transport via ABC system",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0,
"pro_c":1.0,
"pro_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3756c and Rv3757c and Rv3758c and Rv3759c",
"subsystem":"Transport"
},
{
"id":"RIBabc_rev",
"name":"T00121b",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0,
"rib__D_c":-1.0,
"rib__D_e":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(Rv2316 and Rv2317 and Rv2318) or (Rv1235 and Rv1236 and Rv1237 and Rv1238) or (Rv2038c and Rv2039c and Rv2040c and Rv2041c)",
"subsystem":"Transport"
},
{
"id":"PUNP5",
"name":"purine-nucleoside phosphorylase (Inosine)",
"metabolites":{
"hxan_c":-1.0,
"ins_c":1.0,
"pi_c":1.0,
"r1p_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3307",
"subsystem":"Purine metabolism"
},
{
"id":"PUNP3",
"name":"purine-nucleoside phosphorylase (Guanosine)",
"metabolites":{
"gsn_c":1.0,
"gua_c":-1.0,
"pi_c":1.0,
"r1p_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3307",
"subsystem":"Purine metabolism"
},
{
"id":"PUNP7",
"name":"purine-nucleoside phosphorylase (Xanthosine)",
"metabolites":{
"pi_c":1.0,
"r1p_c":-1.0,
"xan_c":-1.0,
"xtsn_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3307",
"subsystem":"Purine metabolism"
},
{
"id":"HXAt",
"name":"MNXR3057",
"metabolites":{
"hxa_c":1.0,
"hxa_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"GLUabc",
"name":"L-glutamate transport via ABC system",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"glu__L_c":1.0,
"glu__L_e":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"TKT1",
"name":"transketolase",
"metabolites":{
"g3p_c":1.0,
"r5p_c":-1.0,
"s7p_c":1.0,
"xu5p_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1449c",
"subsystem":"Pentose phosphate pathway"
},
{
"id":"PUNP1",
"name":"purine-nucleoside phosphorylase (Adenosine)",
"metabolites":{
"ade_c":-1.0,
"adn_c":1.0,
"pi_c":1.0,
"r1p_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3307",
"subsystem":"Purine metabolism"
},
{
"id":"HDCEAt",
"name":"hexadecenoate (n-C16:1) transport in via uniport",
"metabolites":{
"hdcea_c":1.0,
"hdcea_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"FADD3413",
"name":"FADD3413",
"metabolites":{
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"atp_c":-1.0,
"coa_c":1.0,
"h2o_c":-2.0,
"ocdce9coa_c":-1.0,
"ocdcea_c":1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0035 or Rv0099 or Rv0119 or Rv0166 or Rv0214 or Rv0270 or Rv0404 or Rv0551c or Rv0852 or Rv1058 or Rv1185c or Rv1193 or Rv1206 or Rv1427c or Rv1521 or Rv1529 or Rv1549 or Rv1550 or Rv1750c or Rv1925 or Rv2187 or Rv2505c or Rv2590 or Rv2930 or Rv2941 or Rv2948c or Rv2950c or Rv3089 or Rv3506 or Rv3513c or Rv3515c or Rv3561 or Rv3801c or Rv3826",
"subsystem":"Lipid metabolism"
},
{
"id":"PTDCAt",
"name":"fatty acid transport via diffusion",
"metabolites":{
"ptdca_c":1.0,
"ptdca_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"PUNP6",
"name":"purine-nucleoside phosphorylase (Deoxyinosine)",
"metabolites":{
"2dr1p_c":1.0,
"din_c":-1.0,
"hxan_c":1.0,
"pi_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3307",
"subsystem":"Purine metabolism"
},
{
"id":"MAN6PI",
"name":"mannose-6-phosphate isomerase",
"metabolites":{
"f6p_c":1.0,
"man6p_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3255c",
"subsystem":"Starch and sucrose metabolism"
},
{
"id":"ACPIM1B",
"name":"ACPIM1B",
"metabolites":{
"ACP_c":1.0,
"Ac1PIM1_c":1.0,
"PIM1_c":-1.0,
"hdcaACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2611c",
"subsystem":"Phosphatidyl inositol mannoside biosynthesis"
},
{
"id":"PPSC3",
"name":"PPSC3",
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"35dhc26acylACP_c":-1.0,
"57dhc28acylACP_c":1.0,
"co2_c":1.0,
"coa_c":1.0,
"h2o_c":1.0,
"h_c":-2.0,
"malcoa_c":-1.0,
"nad_c":2.0,
"nadh_c":-2.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2933",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"PRCOA1",
"name":"MNXR76960",
"metabolites":{
"andrstndn_c":1.0,
"hcholc3coa_c":-1.0,
"ppcoa_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3540c",
"subsystem":"Cholesterol degradation"
},
{
"id":"IGPDH",
"name":"imidazoleglycerol-phosphate dehydratase",
"metabolites":{
"eig3p_c":-1.0,
"h2o_c":1.0,
"imacp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1601",
"subsystem":"Histidine metabolism"
},
{
"id":"FOLB4",
"name":"FOLB4",
"metabolites":{
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"for_c":1.0,
"gcald_c":1.0,
"h2mpt_c":1.0,
"o2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3607c",
"subsystem":"Folate biosynthesis"
},
{
"id":"BFBP",
"name":"Beta-D-Fructose 1,6-bisphosphate 1-phosphohydrolase",
"metabolites":{
"f6p_c":1.0,
"fdp_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1099c or Rv2131c",
"subsystem":"Glycolysis / Gluconeogenesis"
},
{
"id":"HISTP",
"name":"histidinol-phosphatase",
"metabolites":{
"h2o_c":-1.0,
"hisp_c":-1.0,
"histd_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1601",
"subsystem":"Histidine metabolism"
},
{
"id":"TMN",
"name":"thiaminase",
"metabolites":{
"4ahmmp_c":1.0,
"4mhetz_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"thm_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cofactor biosynthesis"
},
{
"id":"DCAt",
"name":"MNXR1456",
"metabolites":{
"dca_c":1.0,
"dca_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"PRFGS",
"name":"phosphoribosylformylglycinamidine synthase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"fgam_c":-1.0,
"fpram_c":1.0,
"gln__L_c":-1.0,
"glu__L_c":1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0803 and Rv0788",
"subsystem":"Purine metabolism"
},
{
"id":"PRAIS",
"name":"phosphoribosylaminoimidazole synthase",
"metabolites":{
"adp_c":1.0,
"air_c":1.0,
"atp_c":-1.0,
"fpram_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0809",
"subsystem":"Purine metabolism"
},
{
"id":"GARFT",
"name":"phosphoribosylglycinamide formyltransferase",
"metabolites":{
"10fthf_c":-1.0,
"fgam_c":1.0,
"gar_c":-1.0,
"thf_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0956",
"subsystem":"Purine metabolism"
},
{
"id":"SERAT",
"name":"serine O-acetyltransferase",
"metabolites":{
"accoa_c":-1.0,
"acser_c":1.0,
"coa_c":1.0,
"ser_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2335",
"subsystem":"Cysteine and methionine metabolism"
},
{
"id":"PDE4",
"name":"3',5'-cyclic-nucleotide phosphodiesterase",
"metabolites":{
"35cgmp_c":-1.0,
"gmp_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Purine metabolism"
},
{
"id":"GUACYC",
"name":"guanylate cyclase",
"metabolites":{
"35cgmp_c":1.0,
"gtp_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2435c",
"subsystem":"Purine metabolism"
},
{
"id":"AIRCr",
"name":"phosphoribosylaminoimidazole carboxylase",
"metabolites":{
"5aizc_c":1.0,
"air_c":-1.0,
"co2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3275c and Rv3276c",
"subsystem":"Purine metabolism"
},
{
"id":"PRAGSr",
"name":"phosphoribosylglycinamide synthase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"gar_c":1.0,
"gly_c":-1.0,
"pi_c":1.0,
"pram_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0772",
"subsystem":"Purine metabolism"
},
{
"id":"ASNS1",
"name":"asparagine synthase (glutamine-hydrolysing)",
"metabolites":{
"amp_c":1.0,
"asn_c":1.0,
"asp__L_c":-1.0,
"atp_c":-1.0,
"gln__L_c":-1.0,
"glu__L_c":1.0,
"h2o_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2201",
"subsystem":"Alanine, aspartate and glutamate metabolism"
},
{
"id":"ASPCT",
"name":"aspartate carbamoyltransferase",
"metabolites":{
"asp__L_c":-1.0,
"cbasp_c":1.0,
"cbp_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1380",
"subsystem":"Pyrimidine metabolism"
},
{
"id":"DHORTS",
"name":"dihydroorotase",
"metabolites":{
"cbasp_c":-1.0,
"dhor__S_c":1.0,
"h2o_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1381",
"subsystem":"Pyrimidine metabolism"
},
{
"id":"THFOR1",
"name":"5,6,7,8-Tetrahydrofolate:NAD+ oxidoreductase",
"metabolites":{
"fol_c":1.0,
"h_c":2.0,
"nad_c":-2.0,
"nadh_c":2.0,
"thf_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2763c",
"subsystem":"Folate biosynthesis"
},
{
"id":"ADSS",
"name":"adenylosuccinate synthase",
"metabolites":{
"asp__L_c":-1.0,
"dcamp_c":1.0,
"gdp_c":1.0,
"gtp_c":-1.0,
"imp_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0357c",
"subsystem":"Alanine, aspartate and glutamate metabolism"
},
{
"id":"DHFOR",
"name":"Dihydrofolate:NAD+ oxidoreductase",
"metabolites":{
"dhf_c":-1.0,
"fol_c":1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2763c",
"subsystem":"Folate biosynthesis"
},
{
"id":"PYDXNK",
"name":"pyridoxine kinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"pdx5p_c":1.0,
"pydxn_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2606c",
"subsystem":"Pyridoxine metabolism"
},
{
"id":"METabc_rev",
"name":"T00073b",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"met__L_c":-1.0,
"met__L_e":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"CIGAMS",
"name":"cys-1D-myo-inositol 2-deoxy-D-glucopyranoside synthase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"cigam_c":1.0,
"cys__L_c":-1.0,
"igam_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2130c",
"subsystem":"Mycothiol biosynthesis"
},
{
"id":"ACPIM1A",
"name":"ACPIM1A",
"metabolites":{
"ACP_c":1.0,
"Ac1PIM2_c":1.0,
"PIM2_c":-1.0,
"hdcaACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2611c",
"subsystem":"Phosphatidyl inositol mannoside biosynthesis"
},
{
"id":"METabc",
"name":"L-methionine transport via ABC system",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"met__L_c":1.0,
"met__L_e":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"FTHFD",
"name":"formyltetrahydrofolate deformylase",
"metabolites":{
"10fthf_c":-1.0,
"for_c":1.0,
"h2o_c":-1.0,
"thf_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2964",
"subsystem":"Glyoxylate and dicarboxylate metabolism"
},
{
"id":"FADE281",
"name":"MNXR87732",
"metabolites":{
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"cholenec8coa_c":1.0,
"fad_c":-1.0,
"fadh2_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3504 or Rv3505",
"subsystem":"Cholesterol degradation"
},
{
"id":"HEX4",
"name":"hexokinase (D-mannose:ATP)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"man6p_c":1.0,
"man_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Fructose and mannose metabolism"
},
{
"id":"HADA17",
"name":"HADA17",
"metabolites":{
"3hc50acylACP_c":-1.0,
"h2o_c":1.0,
"td2ec50acylacp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0635 and Rv0636 and Rv0637",
"subsystem":"Mycolic acid pathway"
},
{
"id":"HADA12",
"name":"HADA12",
"metabolites":{
"3hc40acylACP_c":-1.0,
"h2o_c":1.0,
"td2ec40acylacp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0635 and Rv0636 and Rv0637",
"subsystem":"Mycolic acid pathway"
},
{
"id":"ORNabc",
"name":"ornithine transport via ABC system",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"orn_c":1.0,
"orn_e":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2320c",
"subsystem":"Transport"
},
{
"id":"HADA10",
"name":"HADA10",
"metabolites":{
"3hc36acylACP_c":-1.0,
"h2o_c":1.0,
"td2ec36acylacp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0635 and Rv0636 and Rv0637",
"subsystem":"Mycolic acid pathway"
},
{
"id":"HADA11",
"name":"HADA11",
"metabolites":{
"3hc38acylACP_c":-1.0,
"h2o_c":1.0,
"td2ec38acylacp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0635 and Rv0636 and Rv0637",
"subsystem":"Mycolic acid pathway"
},
{
"id":"HADA16",
"name":"HADA16",
"metabolites":{
"3hc48acylACP_c":-1.0,
"h2o_c":1.0,
"td2ec48acylacp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0635 and Rv0636 and Rv0637",
"subsystem":"Mycolic acid pathway"
},
{
"id":"ACP1e",
"name":"acid phosphatase, extracellular (secreted)",
"metabolites":{
"fmn_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0,
"ribflv_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3310",
"subsystem":"Riboflavin metabolism"
},
{
"id":"HADA14",
"name":"HADA14",
"metabolites":{
"3hc44acylACP_c":-1.0,
"h2o_c":1.0,
"td2ec44acylacp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0635 and Rv0636 and Rv0637",
"subsystem":"Mycolic acid pathway"
},
{
"id":"HADA15",
"name":"HADA15",
"metabolites":{
"3hc46acylACP_c":-1.0,
"h2o_c":1.0,
"td2ec46acylacp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0635 and Rv0636 and Rv0637",
"subsystem":"Mycolic acid pathway"
},
{
"id":"MAS12",
"name":"MAS12",
"metabolites":{
"co2_c":1.0,
"coa_c":1.0,
"h2o_c":1.0,
"h_c":-2.0,
"mmcoa__S_c":-1.0,
"nadp_c":2.0,
"nadph_c":-2.0,
"pmdecaACP_c":1.0,
"tamoctaACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2940c",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"UAMAGS",
"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"glu__D_c":-1.0,
"pi_c":1.0,
"uama_c":-1.0,
"uamag_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2155c",
"subsystem":"Peptidoglycan and lipopolysaccharide biosynthesis"
},
{
"id":"MAS10",
"name":"MAS10",
"metabolites":{
"co2_c":1.0,
"coa_c":1.0,
"h2o_c":1.0,
"h_c":-2.0,
"mmcoa__S_c":-1.0,
"nadp_c":2.0,
"nadph_c":-2.0,
"tamoctaACP_c":1.0,
"tmhexcACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2940c",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"MAS11",
"name":"MAS11",
"metabolites":{
"co2_c":1.0,
"coa_c":1.0,
"h2o_c":1.0,
"h_c":-2.0,
"mmcoa__S_c":-1.0,
"nadp_c":2.0,
"nadph_c":-2.0,
"pmoctaACP_c":1.0,
"tamhexcACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2940c",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"GLUCYS",
"name":"gamma-glutamylcysteine synthetase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"cys__L_c":-1.0,
"glu__L_c":-1.0,
"glucys_c":1.0,
"pi_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3704c",
"subsystem":"Glutathione metabolism"
},
{
"id":"ORNabc_rev",
"name":"T00077b",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"orn_c":-1.0,
"orn_e":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2320c",
"subsystem":"Transport"
},
{
"id":"DES13",
"name":"DES13",
"metabolites":{
"cd21937ec56acylACP_c":1.0,
"h_c":2.0,
"hexptcACP_c":-1.0,
"nadp_c":-2.0,
"nadph_c":2.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0824c and Rv1094 and Rv3229c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"DES12",
"name":"DES12",
"metabolites":{
"cd21931ec52acylACP_c":1.0,
"dopentacon_c":-1.0,
"h_c":2.0,
"nadp_c":-2.0,
"nadph_c":2.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0824c and Rv1094 and Rv3229c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"DXPRIi",
"name":"1-deoxy-D-xylulose reductoisomerase",
"metabolites":{
"2me4p_c":1.0,
"dxyl5p_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2870c",
"subsystem":"Terpenoid backbone biosynthesis"
},
{
"id":"BKDC",
"name":"BKDC",
"metabolites":{
"2mpdhl_c":-1.0,
"coa_c":-1.0,
"dhlam_c":1.0,
"ibcoa_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2495c",
"subsystem":"Lipid metabolism"
},
{
"id":"ME1",
"name":"malic enzyme (NAD)",
"metabolites":{
"co2_c":1.0,
"h_c":1.0,
"mal_c":-1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"pyr_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2332",
"subsystem":"Pyruvate metabolism"
},
{
"id":"FAS55",
"name":"FAS55",
"metabolites":{
"c22acylACPFAS_c":-1.0,
"coa_c":1.0,
"malc22aclACPFAS_c":1.0,
"malcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS54",
"name":"FAS54",
"metabolites":{
"c22acylACPFAS_c":1.0,
"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0,
"td2ec22acylacpfas_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS57",
"name":"FAS57",
"metabolites":{
"3hc24acylACPFAS_c":1.0,
"bketoc24acylACPFAS_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"NAMNPP",
"name":"nicotinic acid mononucleotide pyrophosphorylase",
"metabolites":{
"h_c":-1.0,
"nac_c":-1.0,
"nicrnt_c":1.0,
"ppi_c":1.0,
"prpp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0573c",
"subsystem":"Nicotinate and nicotinamide metabolism"
},
{
"id":"FAS51",
"name":"FAS51",
"metabolites":{
"bketoc22acylACPFAS_c":1.0,
"co2_c":1.0,
"malc20aclACPFAS_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS50",
"name":"FAS50",
"metabolites":{
"c20acylACPFAS_c":-1.0,
"coa_c":1.0,
"malc20aclACPFAS_c":1.0,
"malcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS53",
"name":"FAS53",
"metabolites":{
"3hc22acylACPFAS_c":-1.0,
"h2o_c":1.0,
"td2ec22acylacpfas_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS52",
"name":"FAS52",
"metabolites":{
"3hc22acylACPFAS_c":1.0,
"bketoc22acylACPFAS_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"MTAN",
"name":"methylthioadenosine nucleosidase",
"metabolites":{
"5mta_c":-1.0,
"5mtr_c":1.0,
"ade_c":1.0,
"h2o_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0091",
"subsystem":"Cysteine and methionine metabolism"
},
{
"id":"ACALDt",
"name":"acetaldehyde reversible transport",
"metabolites":{
"acald_c":1.0,
"acald_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"FAS59",
"name":"FAS59",
"metabolites":{
"c24acylACPFAS_c":1.0,
"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0,
"td2ec24acylacpfas_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FAS58",
"name":"FAS58",
"metabolites":{
"3hc24acylACPFAS_c":-1.0,
"h2o_c":1.0,
"td2ec24acylacpfas_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"THRD_L",
"name":"L-threonine deaminase",
"metabolites":{
"2obut_c":1.0,
"nh3_c":1.0,
"thr__L_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1559",
"subsystem":"Glycine, serine and threonine metabolism"
},
{
"id":"HCYS",
"name":"MNXR68614",
"metabolites":{
"cyst__L_c":-1.0,
"h2o_c":-1.0,
"hcys__L_c":1.0,
"nh3_c":1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cysteine and methionine metabolism"
},
{
"id":"DHAD1",
"name":"dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate)",
"metabolites":{
"23dhmb_c":-1.0,
"3mob_c":1.0,
"h2o_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0189c",
"subsystem":"Pantothenate and CoA biosynthesis"
},
{
"id":"DHAD2",
"name":"Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylpentanoate)",
"metabolites":{
"23dhmp_c":-1.0,
"3mop_c":1.0,
"h2o_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0189c",
"subsystem":"Valine, leucine and isoleucine biosynthesis"
},
{
"id":"4CMLCL_kt",
"name":"4CMLCL kt",
"metabolites":{
"4cml_c":-1.0,
"5odhf2a_c":1.0,
"co2_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0771",
"subsystem":"Benzoate degradation"
},
{
"id":"MMPL8",
"name":"MMPL8",
"metabolites":{
"coa_c":2.0,
"hphthiocnylcoa_c":-2.0,
"sl1278_c":-1.0,
"sl1_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3823c",
"subsystem":"Sulfolipid biosynthesis"
},
{
"id":"GLYCt",
"name":"glycerol transport via channel",
"metabolites":{
"glyc_c":1.0,
"glyc_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"ASPt2r",
"name":"L-aspartate reversible transport via proton symport",
"metabolites":{
"adp_c":1.0,
"asp__L_c":1.0,
"asp__L_e":-1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0346c or Rv2127",
"subsystem":"Transport"
},
{
"id":"ASPt2r_rev",
"name":"T00049b",
"metabolites":{
"adp_c":1.0,
"asp__L_c":-1.0,
"asp__L_e":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0346c or Rv2127",
"subsystem":"Transport"
},
{
"id":"MMAA32",
"name":"MNXR88682",
"metabolites":{
"ahcys_c":1.0,
"amet_c":-1.0,
"cd37mhc59acylACP_c":-1.0,
"cd37mhmc60acylACP_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0643c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"GRTT",
"name":"geranyltranstransferase",
"metabolites":{
"frdp_c":1.0,
"grdp_c":-1.0,
"ipdp_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1086",
"subsystem":"Terpenoid backbone biosynthesis"
},
{
"id":"HISabc",
"name":"L-histidine transport via ABC system",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"his__L_c":1.0,
"his__L_e":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"FCLPA",
"name":"L-fuculose 1-phosphate aldolase",
"metabolites":{
"dhap_c":1.0,
"fc1p_c":-1.0,
"lald_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0727c",
"subsystem":"Fructose and mannose metabolism"
},
{
"id":"PLSC1",
"name":"PLSC1",
"metabolites":{
"1palmgyc3p_c":-1.0,
"ACP_c":1.0,
"pa160190_c":1.0,
"tbsteryol_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2483c or Rv2182c",
"subsystem":"Lipid metabolism"
},
{
"id":"TKT2",
"name":"transketolase",
"metabolites":{
"e4p_c":-1.0,
"f6p_c":1.0,
"g3p_c":1.0,
"xu5p_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1449c",
"subsystem":"Pentose phosphate pathway"
},
{
"id":"FABG14",
"name":"FABG14",
"metabolites":{
"3hc44acylACP_c":1.0,
"bketoc44acylACP_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1483 or Rv1350 or Rv2002 or Rv0242c or Rv2766c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FABG15",
"name":"FABG15",
"metabolites":{
"3hc46acylACP_c":1.0,
"bketoc46acylACP_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1483 or Rv1350 or Rv2002 or Rv0242c or Rv2766c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FABG16",
"name":"FABG16",
"metabolites":{
"3hc48acylACP_c":1.0,
"bketoc48acylACP_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1483 or Rv1350 or Rv2002 or Rv0242c or Rv2766c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FRDcm",
"name":"fumarate reductase, cytosolic/mitochondrial",
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{
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"name":"FABG10",
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{
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"name":"FABG11",
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},
{
"id":"FABG12",
"name":"FABG12",
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{
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"name":"FABG13",
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},
{
"id":"ACGS",
"name":"N-acetylglutamate synthase",
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"coa_c":1.0,
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},
{
"id":"DBTS",
"name":"dethiobiotin synthase",
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"subsystem":"Cofactor biosynthesis"
},
{
"id":"NARK",
"name":"nark",
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"subsystem":"Transport"
},
{
"id":"AMAOTr",
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"h_c":-1.0
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{
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"subsystem":"Mycolic acid pathway"
},
{
"id":"DINSt2",
"name":"deoxyinosine transport in via proton symport",
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"h_c":-1.0,
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"subsystem":"Transport"
},
{
"id":"BIOB",
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"btn_c":1.0,
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},
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"subsystem":"Cofactor biosynthesis"
},
{
"id":"PGM",
"name":"phosphoglycerate mutase",
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"3pg_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
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},
{
"id":"MHPGLUT",
"name":"5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase",
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"subsystem":"Cysteine and methionine metabolism"
},
{
"id":"FRTT",
"name":"farnesyltranstransferase",
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},
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"subsystem":"Terpenoid backbone biosynthesis"
},
{
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"name":"sn-Glycerol 3-phosphate transport via ABC system",
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"subsystem":"Transport"
},
{
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"name":"T00093b",
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{
"id":"THF",
"name":"MNXR67721",
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"h2o_c":-2.0,
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},
"lower_bound":-1000.0,
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"subsystem":"Folate biosynthesis"
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{
"id":"PPSD4",
"name":"PPSD4",
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"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"SHKK",
"name":"shikimate kinase",
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"lower_bound":0.0,
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"subsystem":"Phenylalanine, tyrosine and tryptophan biosynthesis"
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{
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"name":"PPSE8",
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{
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{
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"name":"FADD282",
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{
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{
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{
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"name":"PPSE2",
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{
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{
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{
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{
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{
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{
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"name":"arginine deiminase",
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{
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{
"id":"AHSERL2",
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},
{
"id":"FE2t",
"name":"iron (II) transport",
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"lower_bound":-1000.0,
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"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"UREAt",
"name":"Urea transport via facilitate diffusion",
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
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{
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"name":"sucrose transport in via ABC transport",
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{
"id":"DUTPDP",
"name":"dUTP diphosphatase",
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"h2o_c":-1.0,
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"lower_bound":0.0,
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"subsystem":"Pyrimidine metabolism"
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{
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},
{
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"name":"phospho-N-acetylmuramoyl-pentapeptide-transferase (meso-2,6-diaminopimelate)",
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2156c",
"subsystem":"Peptidoglycan biosynthesis"
},
{
"id":"MOHMT",
"name":"3-methyl-2-oxobutanoate hydroxymethyltransferase",
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"h2o_c":-1.0,
"mlthf_c":-1.0,
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"lower_bound":0.0,
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"subsystem":"Pantothenate and CoA biosynthesis"
},
{
"id":"PANTS",
"name":"pantothenate synthase",
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"pnto_c":1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Alanine, aspartate and glutamate metabolism"
},
{
"id":"NICRNS",
"name":"NICRNS",
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"atp_c":-1.0,
"nicrns_c":-1.0,
"nicrnt_c":1.0
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"lower_bound":0.0,
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"subsystem":"Nicotinate and nicotinamide metabolism"
},
{
"id":"TESA4",
"name":"TESA4",
"metabolites":{
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"h2o_c":-1.0
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"lower_bound":0.0,
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"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"5ALEV",
"name":"MNXR8236",
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"subsystem":"Porphyrin metabolism"
},
{
"id":"DPR",
"name":"2-dehydropantoate 2-reductase",
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"subsystem":"Pantothenate and CoA biosynthesis"
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{
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"name":"phosphopantothenoylcysteine decarboxylase",
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"subsystem":"Pantothenate and CoA biosynthesis"
},
{
"id":"MOEB1",
"name":"MNXR88174",
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"moadcosh_c":1.0,
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"subsystem":"Cofactor biosynthesis"
},
{
"id":"INHA14",
"name":"MNXR64049",
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},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1484",
"subsystem":"Mycolic acid pathway"
},
{
"id":"SSALy",
"name":"succinate-semialdehyde dehydrogenase (NADP)",
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},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0234c or Rv1731",
"subsystem":"Alanine, aspartate and glutamate metabolism"
},
{
"id":"PDHcr",
"name":"Pyruvate dehydrogenase (dihydrolipoamide dehydrogenase) reversible",
"metabolites":{
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"h_c":1.0,
"lpam_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0462",
"subsystem":"Glycolysis / Gluconeogenesis"
},
{
"id":"PLSB21",
"name":"PLSB21",
"metabolites":{
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"hdcaACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2482c",
"subsystem":"Lipid metabolism"
},
{
"id":"PLSB22",
"name":"PLSB22",
"metabolites":{
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"gene_reaction_rule":"Rv2482c or Rv1551",
"subsystem":"Lipid metabolism"
},
{
"id":"GCCc",
"name":"glycine-cleavage complex",
"metabolites":{
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"lpro_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
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"subsystem":"Glycine, serine and threonine metabolism"
},
{
"id":"RPE",
"name":"ribulose 5-phosphate 3-epimerase",
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"xu5p_c":1.0
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv1408",
"subsystem":"Pentose phosphate pathway"
},
{
"id":"PEPA",
"name":"MNXR86162",
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"malt6p_c":1.0,
"malt_c":-1.0,
"pi_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0125",
"subsystem":"Starch and sucrose metabolism"
},
{
"id":"MYCOE",
"name":"MYCOE",
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"mkmycolate_c":-0.117,
"mmycolate85_c":-0.131,
"mmycolate87_c":-0.152,
"mycolate_c":-0.145
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"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Mycolic acid pathway"
},
{
"id":"FADD3414",
"name":"MNXR2010",
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"atp_c":-1.0,
"coa_c":-1.0,
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"ocdcea_c":-1.0,
"ppi_c":1.0
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"subsystem":"Lipid metabolism"
},
{
"id":"PPNCL2",
"name":"phosphopantothenate-cysteine ligase",
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"cmp_c":1.0,
"ctp_c":-1.0,
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"ppi_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Pantothenate and CoA biosynthesis"
},
{
"id":"ACYP_2",
"name":"acylphosphatase (2)",
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"h2o_c":-1.0,
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"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Pyruvate metabolism"
},
{
"id":"G1PTT",
"name":"glucose-1-phosphate thymidylyltransferase",
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"g1p_c":-1.0,
"ppi_c":1.0
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0334",
"subsystem":"Peptidoglycan and lipopolysaccharide biosynthesis"
},
{
"id":"TDPGDH",
"name":"dTDPglucose 4,6-dehydratase",
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"dtdpglu_c":-1.0,
"h2o_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3464 or Rv3634c or Rv3468c or Rv3784",
"subsystem":"Polyketide sugar unit biosynthesis"
},
{
"id":"METS",
"name":"methionine synthase",
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"met__L_c":1.0,
"thf_c":1.0
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2124c and Rv1133c",
"subsystem":"Cysteine and methionine metabolism"
},
{
"id":"FADD5",
"name":"FADD5",
"metabolites":{
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"ddcacoa_c":1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"Rv0035 or Rv0099 or Rv0119 or Rv0166 or Rv0214 or Rv0270 or Rv0404 or Rv0551c or Rv0852 or Rv1058 or Rv1185c or Rv1193 or Rv1206 or Rv1427c or Rv1521 or Rv1529 or Rv1549 or Rv1550 or Rv1750c or Rv1925 or Rv2187 or Rv2505c or Rv2590 or Rv2930 or Rv2941 or Rv2948c or Rv2950c or Rv3089 or Rv3506 or Rv3513c or Rv3515c or Rv3561 or Rv3801c or Rv3826",
"subsystem":"Lipid metabolism"
},
{
"id":"FADD4",
"name":"FADD4",
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"ppi_c":1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"Rv0035 or Rv0099 or Rv0119 or Rv0166 or Rv0214 or Rv0270 or Rv0404 or Rv0551c or Rv0852 or Rv1058 or Rv1185c or Rv1193 or Rv1206 or Rv1427c or Rv1521 or Rv1529 or Rv1549 or Rv1550 or Rv1750c or Rv1925 or Rv2187 or Rv2505c or Rv2590 or Rv2930 or Rv2941 or Rv2948c or Rv2950c or Rv3089 or Rv3506 or Rv3513c or Rv3515c or Rv3561 or Rv3801c or Rv3826",
"subsystem":"Lipid metabolism"
},
{
"id":"FACOAL140",
"name":"fatty-acid--CoA ligase (tetradecanoate)",
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"amp_c":1.0,
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"tdcoa_c":1.0,
"ttdca_c":-1.0
},
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"subsystem":"Lipid metabolism"
},
{
"id":"FAS56",
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"lower_bound":0.0,
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{
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"subsystem":"Respiratory chain"
},
{
"id":"METAT",
"name":"methionine adenosyltransferase",
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"h2o_c":-1.0,
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"ppi_c":1.0
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"upper_bound":1000.0,
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"subsystem":"Cysteine and methionine metabolism"
},
{
"id":"FADD3",
"name":"MNXR22341",
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"gene_reaction_rule":"(Rv3551 and Rv3552) or Rv3561",
"subsystem":"Cholesterol degradation"
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{
"id":"PPAKr",
"name":"Propionate kinase",
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"atp_c":-1.0,
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},
"lower_bound":0.0,
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"gene_reaction_rule":"Rv0409",
"subsystem":"Propanoate metabolism"
},
{
"id":"PIME1",
"name":"PIME1",
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{
"id":"CYTK2",
"name":"cytidylate kinase (dCMP)",
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"dcdp_c":1.0,
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"lower_bound":-1000.0,
"upper_bound":1000.0,
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"subsystem":"Pyrimidine metabolism"
},
{
"id":"GLYCK",
"name":"glycerate kinase",
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},
"lower_bound":0.0,
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"subsystem":"Glycine, serine and threonine metabolism"
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{
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{
"id":"RBFSa",
"name":"riboflavin synthase",
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"subsystem":"Riboflavin metabolism"
},
{
"id":"FADD8",
"name":"FADD8",
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"subsystem":"Lipid metabolism"
},
{
"id":"CHLabc_rev",
"name":"T00114b",
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"subsystem":"Transport"
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{
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"name":"urease",
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"subsystem":"Purine metabolism"
},
{
"id":"ANS",
"name":"anthranilate synthase",
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{
"id":"GTPDPK",
"name":"GTP diphosphokinase",
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"gene_reaction_rule":"Rv2583c",
"subsystem":"Purine metabolism"
},
{
"id":"ADCS",
"name":"4-amino-4-deoxychorismate synthase",
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0013",
"subsystem":"Folate biosynthesis"
},
{
"id":"ANPRT",
"name":"anthranilate phosphoribosyltransferase",
"metabolites":{
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"pran_c":1.0,
"prpp_c":-1.0
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"lower_bound":0.0,
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"subsystem":"Phenylalanine, tyrosine and tryptophan biosynthesis"
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{
"id":"KSTD",
"name":"MNXR85993",
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},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3537",
"subsystem":"Cholesterol degradation"
},
{
"id":"CTPS1",
"name":"CTP synthase (NH3)",
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"subsystem":"Pyrimidine metabolism"
},
{
"id":"CTPS2",
"name":"CTP synthase (glutamine)",
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"subsystem":"Pyrimidine metabolism"
},
{
"id":"PTA2",
"name":"Phosphate acetyltransferase",
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"ppap_c":-1.0,
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"lower_bound":-1000.0,
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"gene_reaction_rule":"Rv0408",
"subsystem":"Lipid metabolism"
},
{
"id":"SUCCabc",
"name":"Succinate transport via ABC system",
"metabolites":{
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"h2o_c":-1.0,
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},
"lower_bound":0.0,
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"gene_reaction_rule":"Rv2443",
"subsystem":"Transport"
},
{
"id":"ASNabc_rev",
"name":"T00152b",
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv0346c",
"subsystem":"Transport"
},
{
"id":"ASNabc",
"name":"T00152a",
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"atp_c":-1.0,
"h2o_c":-1.0,
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},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0346c",
"subsystem":"Transport"
},
{
"id":"XTSNH",
"name":"Xanthosine hydrolase",
"metabolites":{
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"rib__D_c":1.0,
"xan_c":1.0,
"xtsn_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Purine metabolism"
},
{
"id":"MACCOAT",
"name":"2-Methylacetyl-CoA thiolase",
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"accoa_c":1.0,
"coa_c":-1.0,
"ppcoa_c":1.0
},
"lower_bound":-1000.0,
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"gene_reaction_rule":"Rv0859 or Rv1074c or Rv1323",
"subsystem":"Valine, leucine and isoleucine degradation"
},
{
"id":"MTHF1",
"name":"MTHF1",
"metabolites":{
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"mlthf_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cysteine and methionine metabolism"
},
{
"id":"FAS60",
"name":"FAS60",
"metabolites":{
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"malc24aclACPFAS_c":1.0,
"malcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2524c",
"subsystem":"Mycolic acid pathway"
},
{
"id":"HISabc_rev",
"name":"T00135b",
"metabolites":{
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"atp_c":-1.0,
"h2o_c":-1.0,
"his__L_c":-1.0,
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"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"NTPTP1",
"name":"Nucleoside triphosphate tripolyhydrolase",
"metabolites":{
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"dgtp_c":-1.0,
"h2o_c":-1.0,
"pppi_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2344c",
"subsystem":"Purine metabolism"
},
{
"id":"NOt",
"name":"NO transport (diffusion)",
"metabolites":{
"no_c":1.0,
"no_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"CYTD",
"name":"cytidine deaminase",
"metabolites":{
"cytd_c":-1.0,
"h2o_c":-1.0,
"nh3_c":1.0,
"uri_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv3315c",
"subsystem":"Pyrimidine metabolism"
},
{
"id":"R05224",
"name":"Hydrogenobyrinate  <=> Hydrogenobyrinate a,c diamide",
"metabolites":{
"adp_c":2.0,
"atp_c":-2.0,
"gln__L_c":-2.0,
"glu__L_c":2.0,
"h2o_c":-2.0,
"hgbam_c":1.0,
"hgbyr_c":-1.0,
"pi_c":2.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2848c",
"subsystem":"Cofactor biosynthesis"
},
{
"id":"PAPA52",
"name":"PAPA52",
"metabolites":{
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"mycocerosoylacp_c":-2.0,
"ppdimb_c":1.0,
"pphthdl_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2939",
"subsystem":"Dimycocerosate ester biosynthesis"
},
{
"id":"URAt2",
"name":"uracil transport in via proton symport",
"metabolites":{
"h_c":-1.0,
"h_e":1.0,
"ura_c":1.0,
"ura_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
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},
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},
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"id":"PYAM5PO",
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"name":"Glutamate Decarboxylase",
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{
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{
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"name":"MNXR785",
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{
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{
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{
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"name":"Citrate lyase",
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{
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"name":"FABD6",
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"coa_c":-1.0
},
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"gene_reaction_rule":"(Rv2243 or Rv0649) and Rv2244",
"subsystem":"Lipid metabolism"
},
{
"id":"OXCDC",
"name":"Oxalyl-CoA decarboxylase",
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},
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"subsystem":"Glyoxylate and dicarboxylate metabolism"
},
{
"id":"THDPS",
"name":"tetrahydrodipicolinate succinylase",
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"subsystem":"Lysine biosynthesis"
},
{
"id":"ASPO6",
"name":"L-aspartate oxidase",
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv1595",
"subsystem":"Quinolinate biosynthesis"
},
{
"id":"IMPC",
"name":"IMP cyclohydrolase",
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"lower_bound":-1000.0,
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"gene_reaction_rule":"Rv0957",
"subsystem":"Purine metabolism"
},
{
"id":"PC6AR",
"name":"precorrin-6A reductase",
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"subsystem":"Cofactor biosynthesis"
},
{
"id":"AICART",
"name":"phosphoribosylaminoimidazolecarboxamide formyltransferase",
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},
{
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{
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{
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},
{
"id":"L_LACDcm",
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},
{
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"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Lysine biosynthesis"
},
{
"id":"SHSL2r",
"name":"O-succinylhomoserine lyase (H2S)",
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},
{
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"lower_bound":-1000.0,
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"subsystem":"Pentose phosphate pathway"
},
{
"id":"TRPt2r",
"name":"L-tryptophan reversible transport via proton symport",
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{
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"name":"Guanine transport",
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"gene_reaction_rule":"",
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{
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{
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"subsystem":"Folate biosynthesis"
},
{
"id":"METSOXR1",
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{
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},
{
"id":"PPCOAC",
"name":"Propionyl-CoA carboxylase",
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},
{
"id":"MAGD",
"name":"MAGD",
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},
{
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{
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{
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"name":"cobaltochelatase",
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{
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{
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"lower_bound":-1000.0,
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{
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"lower_bound":-1000.0,
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{
"id":"CHOLK",
"name":"Choline kinase",
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"lower_bound":-1000.0,
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"subsystem":"Glycerophospholipid metabolism"
},
{
"id":"MICITDr",
"name":"2-methylisocitrate dehydratase",
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{
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"name":"cob(II)yrinic acid a,c-diamide reductase",
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"lower_bound":0.0,
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"gene_reaction_rule":"",
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{
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"lower_bound":0.0,
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{
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{
"id":"ACONTb",
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"lower_bound":-1000.0,
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"subsystem":"Citrate cycle (TCA cycle)"
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{
"id":"NACt",
"name":"Nicotinic acid transport",
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
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{
"id":"TMDS",
"name":"thymidylate synthase",
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"dump_c":-1.0,
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2764c",
"subsystem":"Pyrimidine metabolism"
},
{
"id":"COt",
"name":"CO transporter via diffusion",
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport"
},
{
"id":"DDPA",
"name":"3-deoxy-D-arabino-heptulosonate 7-phosphate synthetase",
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv2178c",
"subsystem":"Phenylalanine, tyrosine and tryptophan biosynthesis"
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{
"id":"OPP",
"name":"R05611",
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Menaquinone biosynthesis"
},
{
"id":"PKS121",
"name":"PKS121",
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"subsystem":"Lipid metabolism"
},
{
"id":"PKS122",
"name":"PKS122",
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"lower_bound":0.0,
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"gene_reaction_rule":"Rv2048c",
"subsystem":"Lipid metabolism"
},
{
"id":"ACONTa",
"name":"aconitase (half-reaction A, Citrate hydro-lyase)",
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"lower_bound":-1000.0,
"upper_bound":1000.0,
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"subsystem":"Citrate cycle (TCA cycle)"
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{
"id":"ADK1",
"name":"adenylate kinase",
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"atp_c":-1.0
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"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0733",
"subsystem":"Purine metabolism"
},
{
"id":"Cuabc",
"name":"Copper transport via ABC system",
"metabolites":{
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"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Rv0092 or Rv0103c",
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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},
{
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{
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"name":"",
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"lower_bound":0.0,
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{
"id":"EX_ocdcea",
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"gene_reaction_rule":"",
"subsystem":"Exchange"
},
{
"id":"EX_acald",
"name":"",
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{
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{
"id":"EX_adn",
"name":"",
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"gene_reaction_rule":"",
"subsystem":"Exchange"
},
{
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],
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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},
{
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},
{
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"formula":"C34H65O4SR"
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{
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"formula":"C34H66O5"
},
{
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"formula":"C36H69O4SR"
},
{
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},
{
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},
{
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"formula":"C26H51OSR"
},
{
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"formula":"C4H7NO3"
},
{
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"formula":"C48H86N7O19P3S"
},
{
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"name":"2-methyl-7,9-dihydroxy-C31-acyl-ACP",
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"formula":"C31H61O3SR"
},
{
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"formula":"C33H65O3SR"
},
{
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"name":"2-Methylbut-2-enoyl-CoA",
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"formula":"C26H42N7O17P3S"
},
{
"id":"2mbcoa_c",
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},
{
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"formula":"C13H25NO2S2"
},
{
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"formula":"C21H41OSR"
},
{
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"formula":"C23H45OSR"
},
{
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"formula":"C7H8O6"
},
{
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"formula":"C7H10O7"
},
{
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"formula":"C14H26N3O17P3"
},
{
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"formula":"C3H7O7P"
},
{
"id":"2plac_c",
"name":"(2S)-2-Phospholactate",
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"formula":"C3H7O6P"
},
{
"id":"34dhsa_c",
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"formula":"C19H24O4"
},
{
"id":"35dhc26acylACP_c",
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},
{
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"formula":"C28H55O3SR"
},
{
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"name":"2-Dehydro-3-deoxy-D-arabino-heptonate 7-phosphate",
"compartment":"c",
"formula":"C7H13O10P"
},
{
"id":"3hc10acylACPFAS_c",
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"formula":"C10H20O2S2R2"
},
{
"id":"3hc12acylACPFAS_c",
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"formula":"C12H24O2S2R2"
},
{
"id":"3hc14acylACPFAS_c",
"name":"D-3-hydroxy-C14-acyl-ACP-FAS",
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"formula":"C14H28O2S2R2"
},
{
"id":"3hc16acylACPFAS_c",
"name":"D-3-hydroxy-C16-acyl-ACP-FAS",
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"formula":"C16H32O2S2R2"
},
{
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"name":"D-3-hydroxy-C18-acyl-ACP-FAS",
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"formula":"C18H36O2S2R2"
},
{
"id":"3hc18acylACP_c",
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},
{
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"formula":"C20H40O2S2R2"
},
{
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"formula":"C20H39O2SR"
},
{
"id":"3hc22acylACPFAS_c",
"name":"D-3-hydroxy-C22-acyl-ACP-FAS",
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"formula":"C22H44O2S2R2"
},
{
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"formula":"C22H43O2SR"
},
{
"id":"3hc24acylACPFAS_c",
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"formula":"C24H48O2S2R2"
},
{
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"formula":"C24H47O2SR"
},
{
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"formula":"C26H52O2S2R2"
},
{
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},
{
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},
{
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{
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{
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},
{
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},
{
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{
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{
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{
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{
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{
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},
{
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{
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{
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{
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{
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},
{
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},
{
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"formula":"C6H12O2S2R2"
},
{
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"formula":"C8H16O2S2R2"
},
{
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"formula":"C19H24O3"
},
{
"id":"3mb2coa_c",
"name":"3-Methylcrotonyl-CoA",
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"formula":"C26H42N7O17P3S"
},
{
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"formula":"C26H44N7O17P3S"
},
{
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},
{
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"name":"2-Oxo-2,3-dihydrofuran-5-acetate",
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"formula":"C6H6O4"
},
{
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"formula":"C3H7O7P"
},
{
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"formula":"C3H8NO6P"
},
{
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{
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"formula":"C19H24O6"
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{
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},
{
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},
{
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"formula":"C7H8O2"
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{
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{
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{
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{
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{
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{
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{
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"formula":"C5H6O4"
},
{
"id":"4ppcys_c",
"name":"(R)-4-Phosphopantothenoyl-L-cysteine",
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},
{
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},
{
"id":"4ppan_c",
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{
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{
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"formula":"C30H59O3SR"
},
{
"id":"5aop_c",
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"formula":"C5H9NO3"
},
{
"id":"dad_5_c",
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"formula":"C10H13N5O3"
},
{
"id":"glucys_c",
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"formula":"C8H14N2O5S"
},
{
"id":"5mta_c",
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"formula":"C11H15N5O3S"
},
{
"id":"5mtr_c",
"name":"5-Methylthio-D-ribose",
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"formula":"C6H12O4S"
},
{
"id":"5ohhipcoa_c",
"name":"5-hydroxy-3-[(3aS,4S,5R,7aS)-7a-methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoyl-CoA",
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"formula":"C34H54N7O19P3S"
},
{
"id":"5ohhip_c",
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"formula":"C13H20O4"
},
{
"id":"5oxpro_c",
"name":"Pidolic acid",
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"formula":"C5H7NO3"
},
{
"id":"dann_c",
"name":"7,8-Diaminononanoate",
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"formula":"C9H20N2O2"
},
{
"id":"8aonn_c",
"name":"8-Amino-7-oxononanoate",
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"formula":"C9H17NO3"
},
{
"id":"9hdcecoa_c",
"name":"cis-9-Hexadecenoyl-CoA",
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"formula":"C37H64N7O17P3S"
},
{
"id":"hdcea_c",
"name":"(9Z)-Hexadecenoic acid",
"compartment":"c",
"formula":"C16H30O2"
},
{
"id":"hdcea_e",
"name":"(9Z)-Hexadecenoic acid",
"compartment":"e",
"formula":"C16H30O2"
},
{
"id":"ocdcea_c",
"name":"(9Z)-Octadecenoic acid",
"compartment":"c",
"formula":"C18H34O2"
},
{
"id":"ocdcea_e",
"name":"(9Z)-Octadecenoic acid",
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"formula":"C18H34O2"
},
{
"id":"ocdce9coa_c",
"name":"Oleoyl-CoA",
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"formula":"C39H68N7O17P3S"
},
{
"id":"9ohadd_c",
"name":"9alpha-Hydroxyandrosta-1,4-diene-3,17-dione",
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"formula":"C19H24O3"
},
{
"id":"5aprbu_c",
"name":"5-Amino-6-(5-phospho-D-ribitylamino)uracil",
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"formula":"C9H17N4O9P"
},
{
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"formula":"C9H15N4O9P"
},
{
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"formula":"C9H16N4O6"
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{
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"formula":"C25H40N7O18P3S"
},
{
"id":"2ahbut_c",
"name":"(R)-3-Hydroxy-3-methyl-2-oxopentanoate",
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"formula":"C6H10O4"
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{
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{
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{
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"formula":"C78H145O29P"
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{
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"formula":"C84H155O34P"
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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"formula":"C2H4O"
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{
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{
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"formula":"C7H13N3O2R2"
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{
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"formula":"C23H38N7O17P3S"
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{
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"formula":"C2H5O5P"
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{
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"formula":"C5H8O4"
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{
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{
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"formula":"HSR"
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{
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"formula":"C4H6O3"
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{
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"formula":"C2H4O2"
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{
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"formula":"C2H4O2"
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{
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{
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"formula":"C19H24O2"
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{
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"formula":"C68H97CoN21O21P2"
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{
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"formula":"C58H84CoN16O11"
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{
"id":"adocbip_c",
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"formula":"C58H85CoN16O14P"
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{
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{
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"formula":"C55H73CoN11O15"
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{
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"formula":"C10H19NO2S2"
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{
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{
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{
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{
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"formula":"C10H15N5O10P2"
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{
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{
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{
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"formula":"C5H5N5"
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{
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"formula":"C8H16NO9P"
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{
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"formula":"C19H39O7P"
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{
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"formula":"C7H11N5O8P2"
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{
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"formula":"C6H9N3O"
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{
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"formula":"C9H16N5O13P3"
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{
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"formula":"C9H15N4O8P"
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{
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"formula":"C8H14N3O7P"
},
{
"id":"akg_c",
"name":"2-Oxoglutarate",
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"formula":"C5H6O5"
},
{
"id":"akg_e",
"name":"2-Oxoglutarate",
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"formula":"C5H6O5"
},
{
"id":"2dhp_c",
"name":"2-Dehydropantoate",
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"formula":"C6H10O4"
},
{
"id":"alaala_c",
"name":"D-Alanyl-D-alanine",
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"formula":"C6H12N2O3"
},
{
"id":"ala__L_c",
"name":"L-Alanine",
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"formula":"C3H7NO2"
},
{
"id":"ala__L_e",
"name":"L-Alanine",
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"formula":"C3H7NO2"
},
{
"id":"L2aadp6sa_c",
"name":"L-2-Aminoadipate 6-semialdehyde",
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"formula":"C6H11NO3"
},
{
"id":"aact_c",
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"formula":"C3H7NO"
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{
"id":"mptamp_c",
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"formula":"C20H26N10O12P2S2"
},
{
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"name":"4-Amino-2-methyl-5-phosphomethylpyrimidine",
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"formula":"C6H10N3O4P"
},
{
"id":"amp_c",
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"formula":"C10H14N5O7P"
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{
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"formula":"C6H10O5"
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{
"id":"anth_c",
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"formula":"C7H7NO2"
},
{
"id":"anth_e",
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"formula":"C7H7NO2"
},
{
"id":"apolipo_c",
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"formula":"C8H17NO"
},
{
"id":"aps_c",
"name":"Adenylyl sulfate",
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"formula":"C10H14N5O10PS"
},
{
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},
{
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"formula":"C604H1054O663P73"
},
{
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"formula":"C1664H2711N210O1289P72"
},
{
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"formula":"C55H92O11P2"
},
{
"id":"argsuc_c",
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"formula":"C10H18N4O6"
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{
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"formula":"C6H14N4O2"
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{
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"formula":"C6H14N4O2"
},
{
"id":"rdmbzi_c",
"name":"alpha-Ribazole",
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"formula":"C14H18N2O4"
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{
"id":"acser_c",
"name":"O-Acetyl-L-serine",
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"formula":"C5H9NO4"
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{
"id":"asn_c",
"name":"L-Asparagine",
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"formula":"C4H8N2O3"
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{
"id":"asn_e",
"name":"L-Asparagine",
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"formula":"C4H8N2O3"
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{
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"formula":"C4H8NO7P"
},
{
"id":"aspsa_c",
"name":"L-Aspartate 4-semialdehyde",
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"formula":"C4H7NO3"
},
{
"id":"asp__L_c",
"name":"L-Aspartate",
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"formula":"C4H7NO4"
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{
"id":"asp__L_e",
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"formula":"C4H7NO4"
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{
"id":"dcamp_c",
"name":"N6-(1,2-Dicarboxyethyl)-AMP",
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"formula":"C14H18N5O11P"
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{
"id":"atp_c",
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"formula":"C10H16N5O13P3"
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{
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"formula":"C4H4N2O3"
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{
"id":"bccpco2_c",
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"formula":"C8H13N3O4R2"
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{
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"formula":"C7H13N3O2R2"
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{
"id":"btnso_c",
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"formula":"C10H16N2O4S"
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{
"id":"btn_c",
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"formula":"C10H16N2O3S"
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{
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{
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"formula":"C10H18O2S2R2"
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{
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{
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{
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{
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{
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{
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"formula":"C20H38O2S2R2"
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{
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{
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"formula":"C22H42O2S2R2"
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{
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{
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"formula":"C24H46O2S2R2"
},
{
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{
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"formula":"C26H50O2S2R2"
},
{
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"formula":"C26H49O2SR"
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{
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"formula":"C28H53O2SR"
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{
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"formula":"C30H57O2SR"
},
{
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"formula":"C32H61O2SR"
},
{
"id":"bketoc34acylACP_c",
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"formula":"C34H65O2SR"
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{
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"formula":"C36H69O2SR"
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{
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"formula":"C38H73O2SR"
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{
"id":"bketoc40acylACP_c",
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"formula":"C40H77O2SR"
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{
"id":"bketoc42acylACP_c",
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"formula":"C42H81O2SR"
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{
"id":"bketoc44acylACP_c",
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"formula":"C44H85O2SR"
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{
"id":"bketoc46acylACP_c",
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"formula":"C46H89O2SR"
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{
"id":"bketoc48acylACP_c",
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"formula":"C48H93O2SR"
},
{
"id":"bketoc4acylACPFAS_c",
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"formula":"C4H6O2S2R2"
},
{
"id":"bketoc50acylACP_c",
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"formula":"C50H97O2SR"
},
{
"id":"bketoc52acylACP_c",
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"formula":"C52H101O2SR"
},
{
"id":"bketoc54acylACP_c",
"name":"beta-keto-C54-acyl-ACP",
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"formula":"C54H105O2SR"
},
{
"id":"bketoc56acylACP_c",
"name":"beta-keto-C56-acyl-ACP",
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"formula":"C56H109O2SR"
},
{
"id":"bketoc58acylACP_c",
"name":"beta-keto-C58-acyl-ACP",
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"formula":"C58H113O2SR"
},
{
"id":"bketoc6acylACPFAS_c",
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"formula":"C6H10O2S2R2"
},
{
"id":"bketoc8acylACPFAS_c",
"name":"beta-keto-C8-acyl-ACP-FAS",
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"formula":"C8H14O2S2R2"
},
{
"id":"btcoa_c",
"name":"Butanoyl-CoA",
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"formula":"C25H42N7O17P3S"
},
{
"id":"c10acylACPFAS_c",
"name":"C10-acyl-ACP-FAS",
"compartment":"c",
"formula":"C10H20OS2R2"
},
{
"id":"c12acylACPFAS_c",
"name":"C12-acyl-ACP-FAS",
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"formula":"C12H24OS2R2"
},
{
"id":"c14acylACPFAS_c",
"name":"C14-acyl-ACP-FAS",
"compartment":"c",
"formula":"C14H28OS2R2"
},
{
"id":"c16acylACPFAS_c",
"name":"C16-acyl-ACP-FAS",
"compartment":"c",
"formula":"C16H32OS2R2"
},
{
"id":"c18acylACPFAS_c",
"name":"C18-acyl-ACP-FAS",
"compartment":"c",
"formula":"C18H36OS2R2"
},
{
"id":"c20acylACPFAS_c",
"name":"C20-acyl-ACP-FAS",
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"formula":"C20H40OS2R2"
},
{
"id":"c22acylACPFAS_c",
"name":"C22-acyl-ACP-FAS",
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"formula":"C22H44OS2R2"
},
{
"id":"c24acylACPFAS_c",
"name":"C24-acyl-ACP-FAS",
"compartment":"c",
"formula":"C24H48OS2R2"
},
{
"id":"c26acylACPFAS_c",
"name":"C26-acyl-ACP-FAS",
"compartment":"c",
"formula":"C26H52OS2R2"
},
{
"id":"c2acylACPFAS_c",
"name":"C2-acyl-ACP-FAS",
"compartment":"c",
"formula":"C2H4OS2R2"
},
{
"id":"c4acylACPFAS_c",
"name":"C4-acyl-ACP-FAS",
"compartment":"c",
"formula":"C4H8OS2R2"
},
{
"id":"c6acylACPFAS_c",
"name":"C6-acyl-ACP-FAS",
"compartment":"c",
"formula":"C6H12OS2R2"
},
{
"id":"c78mycolateACP_c",
"name":"C78-alpha-mycolate-ACP",
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"formula":"C82H159O2SR"
},
{
"id":"c78mycolatepp_c",
"name":"C78-alpha-mycolate-PP",
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"formula":"C143H259O11P"
},
{
"id":"c8acylacpFAS_c",
"name":"C8-acyl-ACP-FAS",
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"formula":"C8H16OS2R2"
},
{
"id":"cbasp_c",
"name":"N-Carbamoyl-L-aspartate",
"compartment":"c",
"formula":"C5H8N2O5"
},
{
"id":"15dap_c",
"name":"Cadaverine",
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"formula":"C5H14N2"
},
{
"id":"15dap_e",
"name":"Cadaverine",
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"formula":"C5H14N2"
},
{
"id":"5aizc_c",
"name":"1-(5-Phospho-D-ribosyl)-5-amino-4-imidazolecarboxylate",
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"formula":"C9H14N3O9P"
},
{
"id":"clpn_TB_c",
"name":"Cardiolipin",
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"formula":"C79H154O17P2"
},
{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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},
{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
"id":"behenAMP_c",
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"formula":"C32H56N5O8P"
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{
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{
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{
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{
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"formula":"C33H58N7O17P3S"
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{
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{
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{
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{
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{
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{
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{
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{
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{
"id":"decd_tb_c",
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{
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"formula":"C7H10O6"
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
"id":"hipohcoa_c",
"name":"3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA",
"compartment":"c",
"formula":"C34H54N7O20P3S"
},
{
"id":"hip_c",
"name":"3-[(3aS,4S,7aS)-7a-Methyl-1,5-dioxo-octahydro-1H-inden-4-yl]propanoic acid",
"compartment":"c",
"formula":"C13H18O4"
},
{
"id":"hisp_c",
"name":"L-Histidinol phosphate",
"compartment":"c",
"formula":"C6H12N3O4P"
},
{
"id":"histd_c",
"name":"L-Histidinol",
"compartment":"c",
"formula":"C6H11N3O"
},
{
"id":"his__L_c",
"name":"L-Histidine",
"compartment":"c",
"formula":"C6H9N3O2"
},
{
"id":"his__L_e",
"name":"L-Histidine",
"compartment":"e",
"formula":"C6H9N3O2"
},
{
"id":"5h4opntn_c",
"name":"5-hydroxylevulinic acid",
"compartment":"c",
"formula":"C5H8O4"
},
{
"id":"h2mb4p_c",
"name":"1-Hydroxy-2-methyl-2-butenyl 4-diphosphate",
"compartment":"c",
"formula":"C5H12O8P2"
},
{
"id":"3hmbcoa_c",
"name":"(2S,3S)-3-Hydroxy-2-methylbutanoyl-CoA",
"compartment":"c",
"formula":"C26H44N7O18P3S"
},
{
"id":"hmgcoa_c",
"name":"(S)-3-Hydroxy-3-methylglutaryl-CoA",
"compartment":"c",
"formula":"C27H44N7O20P3S"
},
{
"id":"3hmop_c",
"name":"(R)-3-Hydroxy-3-methyl-2-oxopentanoate",
"compartment":"c",
"formula":"C6H10O4"
},
{
"id":"2h3oxoadp_c",
"name":"2-hydroxy-3-oxoadipate",
"compartment":"c",
"formula":"C6H8O6"
},
{
"id":"hgentis_c",
"name":"Homogentisate",
"compartment":"c",
"formula":"C8H8O4"
},
{
"id":"hexdp_c",
"name":"all-trans-Hexaprenyl diphosphate",
"compartment":"c",
"formula":"C30H52O7P2"
},
{
"id":"6hmhpt_c",
"name":"2-Amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine",
"compartment":"c",
"formula":"C7H9N5O2"
},
{
"id":"hom_c",
"name":"L-Homoserine",
"compartment":"c",
"formula":"C4H9NO3"
},
{
"id":"hgbam_c",
"name":"Hydrogenobyrinate a,c diamide",
"compartment":"c",
"formula":"C45H62N6O12"
},
{
"id":"hgbyr_c",
"name":"Hydrogenobyrinate",
"compartment":"c",
"formula":"C45H60N4O14"
},
{
"id":"hmbil_c",
"name":"Hydroxymethylbilane",
"compartment":"c",
"formula":"C40H46N4O17"
},
{
"id":"hphthiocnylcoa_c",
"name":"hydroxyphthioceranoyl-CoA",
"compartment":"c",
"formula":"C60H112N7O18P3S"
},
{
"id":"hxan_c",
"name":"Hypoxanthine",
"compartment":"c",
"formula":"C5H4N4O"
},
{
"id":"hxan_e",
"name":"Hypoxanthine",
"compartment":"e",
"formula":"C5H4N4O"
},
{
"id":"h_c",
"name":"H+",
"compartment":"c",
"formula":"H"
},
{
"id":"h_e",
"name":"H+",
"compartment":"e",
"formula":"H"
},
{
"id":"hr_e",
"name":"H+",
"compartment":"e",
"formula":"H"
},
{
"id":"ibcoa_c",
"name":"2-Methylpropanoyl-CoA",
"compartment":"c",
"formula":"C25H42N7O17P3S"
},
{
"id":"2mpdhl_c",
"name":"S-(2-Methylpropanoyl)-dihydrolipoamide",
"compartment":"c",
"formula":"C12H23NO2S2"
},
{
"id":"ichor_c",
"name":"Isochorismate",
"compartment":"c",
"formula":"C10H10O6"
},
{
"id":"icit_c",
"name":"Isocitrate",
"compartment":"c",
"formula":"C6H8O7"
},
{
"id":"3ig3p_c",
"name":"Indoleglycerol phosphate",
"compartment":"c",
"formula":"C11H14NO6P"
},
{
"id":"ile__L_c",
"name":"L-Isoleucine",
"compartment":"c",
"formula":"C6H13NO2"
},
{
"id":"ile__L_e",
"name":"L-Isoleucine",
"compartment":"e",
"formula":"C6H13NO2"
},
{
"id":"imacp_c",
"name":"3-(Imidazol-4-yl)-2-oxopropyl phosphate",
"compartment":"c",
"formula":"C6H9N2O5P"
},
{
"id":"imp_c",
"name":"IMP",
"compartment":"c",
"formula":"C10H13N4O8P"
},
{
"id":"ins_c",
"name":"Inosine",
"compartment":"c",
"formula":"C10H12N4O5"
},
{
"id":"ins_e",
"name":"Inosine",
"compartment":"e",
"formula":"C10H12N4O5"
},
{
"id":"2ippm_c",
"name":"2-Isopropylmaleate",
"compartment":"c",
"formula":"C7H10O4"
},
{
"id":"3c3hmp_c",
"name":"alpha-Isopropylmalate",
"compartment":"c",
"formula":"C7H12O5"
},
{
"id":"ipdp_c",
"name":"Isopentenyl diphosphate",
"compartment":"c",
"formula":"C5H12O7P2"
},
{
"id":"mi3p__D_c",
"name":"1D-myo-Inositol 3-phosphate",
"compartment":"c",
"formula":"C6H13O9P"
},
{
"id":"iasp_c",
"name":"Iminoaspartate",
"compartment":"c",
"formula":"C4H5NO4"
},
{
"id":"mkmycolate_c",
"name":"keto-mycolate C86 (26)",
"compartment":"c",
"formula":"C86H168O4"
},
{
"id":"k_c",
"name":"Potassium",
"compartment":"c",
"formula":"K"
},
{
"id":"k_e",
"name":"Potassium",
"compartment":"e",
"formula":"K"
},
{
"id":"L2aadp_c",
"name":"L-alpha-Aminoadipic acid",
"compartment":"c",
"formula":"C6H11NO4"
},
{
"id":"L2aadp_e",
"name":"L-alpha-Aminoadipic acid",
"compartment":"e",
"formula":"C6H11NO4"
},
{
"id":"lgt__S_c",
"name":"(R)-S-Lactoylglutathione",
"compartment":"c",
"formula":"C13H21N3O8S"
},
{
"id":"lac__D_c",
"name":"(R)-Lactate",
"compartment":"c",
"formula":"C3H6O3"
},
{
"id":"lac__D_e",
"name":"(R)-Lactate",
"compartment":"e",
"formula":"C3H6O3"
},
{
"id":"lald_c",
"name":"(S)-Lactaldehyde",
"compartment":"c",
"formula":"C3H6O2"
},
{
"id":"leu__L_c",
"name":"L-Leucine",
"compartment":"c",
"formula":"C6H13NO2"
},
{
"id":"leu__L_e",
"name":"L-Leucine",
"compartment":"e",
"formula":"C6H13NO2"
},
{
"id":"uagmda_c",
"name":"Undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine",
"compartment":"c",
"formula":"C87H143N7O23P2"
},
{
"id":"uaagmda_c",
"name":"Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine",
"compartment":"c",
"formula":"C95H156N8O28P2"
},
{
"id":"lpro_c",
"name":"Lipoylprotein",
"compartment":"c",
"formula":"C8H14NOS2R"
},
{
"id":"lpam_c",
"name":"Lipoamide",
"compartment":"c",
"formula":"C8H15NOS2"
},
{
"id":"lac__L_c",
"name":"(S)-Lactate",
"compartment":"c",
"formula":"C3H6O3"
},
{
"id":"lac__L_e",
"name":"(S)-Lactate",
"compartment":"e",
"formula":"C3H6O3"
},
{
"id":"cyst__L_c",
"name":"L-Cystathionine",
"compartment":"c",
"formula":"C7H14N2O4S"
},
{
"id":"lppg_c",
"name":"(2S)-Lactyl-2-diphospho-5-guanosine",
"compartment":"c",
"formula":"C13H19N5O13P2"
},
{
"id":"lys__L_c",
"name":"L-Lysine",
"compartment":"c",
"formula":"C6H14N2O2"
},
{
"id":"lys__L_e",
"name":"L-Lysine",
"compartment":"e",
"formula":"C6H14N2O2"
},
{
"id":"2maacoa_c",
"name":"2-Methylacetoacetyl-CoA",
"compartment":"c",
"formula":"C26H42N7O18P3S"
},
{
"id":"4mlacac_c",
"name":"4-Maleylacetoacetate",
"compartment":"c",
"formula":"C8H8O6"
},
{
"id":"2mp2coa_c",
"name":"2-Methylprop-2-enoyl-CoA",
"compartment":"c",
"formula":"C25H40N7O17P3S"
},
{
"id":"mag_c",
"name":"1-Acylglycerol",
"compartment":"c",
"formula":"C22H44O4"
},
{
"id":"2mahmp_c",
"name":"2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate",
"compartment":"c",
"formula":"C6H11N3O7P2"
},
{
"id":"malACP_c",
"name":"Malonyl-[acyl-carrier protein]",
"compartment":"c",
"formula":"C3H3O3SR"
},
{
"id":"malc10aclACPFAS_c",
"name":"malonyl-C10-acyl-ACP-FAS",
"compartment":"c",
"formula":"C13H22O4S2R2"
},
{
"id":"malc12aclACPFAS_c",
"name":"malonyl-C12-acyl-ACP-FAS",
"compartment":"c",
"formula":"C15H26O4S2R2"
},
{
"id":"malc14aclACPFAS_c",
"name":"malonyl-C14-acyl-ACP-FAS",
"compartment":"c",
"formula":"C17H30O4S2R2"
},
{
"id":"malc16aclACPFAS_c",
"name":"malonyl-C16-acyl-ACP-FAS",
"compartment":"c",
"formula":"C19H34O4S2R2"
},
{
"id":"malc18aclACPFAS_c",
"name":"malonyl-C18-acyl-ACP-FAS",
"compartment":"c",
"formula":"C21H38O4S2R2"
},
{
"id":"malc20aclACPFAS_c",
"name":"malonyl-C20-acyl-ACP-FAS",
"compartment":"c",
"formula":"C23H42O4S2R2"
},
{
"id":"malc22aclACPFAS_c",
"name":"malonyl-C22-acyl-ACP-FAS",
"compartment":"c",
"formula":"C25H46O4S2R2"
},
{
"id":"malc24aclACPFAS_c",
"name":"malonyl-C24-acyl-ACP-FAS",
"compartment":"c",
"formula":"C27H50O4S2R2"
},
{
"id":"malc2aclACPFAS_c",
"name":"malonyl-C2-acyl-ACP-FAS",
"compartment":"c",
"formula":"C5H6O4S2R2"
},
{
"id":"malc4aclACPFAS_c",
"name":"malonyl-C4-acyl-ACP-FAS",
"compartment":"c",
"formula":"C7H10O4S2R2"
},
{
"id":"malc6aclACPFAS_c",
"name":"malonyl-C6-acyl-ACP-FAS",
"compartment":"c",
"formula":"C9H14O4S2R2"
},
{
"id":"malc8aclACPFAS_c",
"name":"malonyl-C8-acyl-ACP-FAS",
"compartment":"c",
"formula":"C11H18O4S2R2"
},
{
"id":"malcoa_c",
"name":"Malonyl-CoA",
"compartment":"c",
"formula":"C24H38N7O19P3S"
},
{
"id":"mal_c",
"name":"(S)-Malate",
"compartment":"c",
"formula":"C4H6O5"
},
{
"id":"mal_e",
"name":"(S)-Malate",
"compartment":"e",
"formula":"C4H6O5"
},
{
"id":"man1p_c",
"name":"D-Mannose 1-phosphate",
"compartment":"c",
"formula":"C6H13O9P"
},
{
"id":"man6p_c",
"name":"D-Mannose 6-phosphate",
"compartment":"c",
"formula":"C6H13O9P"
},
{
"id":"man_c",
"name":"D-Mannose",
"compartment":"c",
"formula":"C6H12O6"
},
{
"id":"man_e",
"name":"D-Mannose",
"compartment":"e",
"formula":"C6H12O6"
},
{
"id":"mas_c",
"name":"Mycocerosic acid synthase",
"compartment":"c",
"formula":"HSR"
},
{
"id":"mcbts_c",
"name":"Mycobactin with octadecanoyl group",
"compartment":"c",
"formula":"C45H73N5O10"
},
{
"id":"mcbtt_c",
"name":"Mycobactin with octadecenoyl group",
"compartment":"c",
"formula":"C45H71N5O10"
},
{
"id":"mcbtm_c",
"name":"Mycobactin with malonyl group",
"compartment":"c",
"formula":"C30H41N5O12"
},
{
"id":"mmycolate85_c",
"name":"methoxy-mycolate C85 (26)",
"compartment":"c",
"formula":"C85H168O4"
},
{
"id":"mmycolate87_c",
"name":"methoxy-mycolate C87 (26)",
"compartment":"c",
"formula":"C87H172O4"
},
{
"id":"26dap_c",
"name":"meso-2,6-Diaminoheptanedioate",
"compartment":"c",
"formula":"C7H14N2O4"
},
{
"id":"2me4p_c",
"name":"2-C-Methyl-erythritol 4-phosphate",
"compartment":"c",
"formula":"C5H13O7P"
},
{
"id":"2mecdp_c",
"name":"2-C0Methyl-D-erythritol 2,4-cyclodiphosphate",
"compartment":"c",
"formula":"C5H12O9P2"
},
{
"id":"methf_c",
"name":"5,10-Methenyltetrahydrofolate",
"compartment":"c",
"formula":"C20H22N7O6"
},
{
"id":"micit_c",
"name":"(2S,3R)-3-Hydroxybutane-1,2,3-tricarboxylate;",
"compartment":"c",
"formula":"C7H10O7"
},
{
"id":"mmtsa_c",
"name":"(S)-Methylmalonate semialdehyde",
"compartment":"c",
"formula":"C4H6O3"
},
{
"id":"metsox_S__L_c",
"name":"L-Methionine (S)-S-oxide",
"compartment":"c",
"formula":"C5H11NO3S"
},
{
"id":"mlthf_c",
"name":"5,10-Methylenetetrahydrofolate",
"compartment":"c",
"formula":"C20H23N7O6"
},
{
"id":"met__L_c",
"name":"L-Methionine",
"compartment":"c",
"formula":"C5H11NO2S"
},
{
"id":"met__L_e",
"name":"L-Methionine",
"compartment":"e",
"formula":"C5H11NO2S"
},
{
"id":"mocogdp_c",
"name":"Molybdopterin guanine dinucleotide",
"compartment":"c",
"formula":"C20H24N10O13P2S2"
},
{
"id":"3mgcoa_c",
"name":"3-Methylglutaconyl-CoA",
"compartment":"c",
"formula":"C27H42N7O19P3S"
},
{
"id":"mthgxl_c",
"name":"Methylglyoxal",
"compartment":"c",
"formula":"C3H4O2"
},
{
"id":"mg2_c",
"name":"Magnesium cation",
"compartment":"c",
"formula":"Mg"
},
{
"id":"mg2_e",
"name":"Magnesium cation",
"compartment":"e",
"formula":"Mg"
},
{
"id":"inost_c",
"name":"myo-Inositol",
"compartment":"c",
"formula":"C6H12O6"
},
{
"id":"mql8_c",
"name":"Menaquinone",
"compartment":"c",
"formula":"C51H72O2"
},
{
"id":"malt6p_c",
"name":"Maltose 6-phosphate",
"compartment":"c",
"formula":"C12H23O14P"
},
{
"id":"malt_c",
"name":"Maltose",
"compartment":"c",
"formula":"C12H22O11"
},
{
"id":"malt_e",
"name":"Maltose",
"compartment":"e",
"formula":"C12H22O11"
},
{
"id":"mn2_c",
"name":"Manganese cation",
"compartment":"c",
"formula":"Mn"
},
{
"id":"mn2_e",
"name":"Manganese cation",
"compartment":"e",
"formula":"Mn"
},
{
"id":"moadcoo_c",
"name":"MOAD-COOH",
"compartment":"c",
"formula":"CHO2R"
},
{
"id":"moadcosh_c",
"name":"MOAD-COSH",
"compartment":"c",
"formula":"CHOSR"
},
{
"id":"mobd_c",
"name":"Molybdate",
"compartment":"c",
"formula":"H2MoO4"
},
{
"id":"mobd_e",
"name":"Molybdate",
"compartment":"e",
"formula":"H2MoO4"
},
{
"id":"moco_c",
"name":"Molybdenum cofactor",
"compartment":"c",
"formula":"C10H12MoN5O8PS2"
},
{
"id":"mpt_c",
"name":"Molybdopterin",
"compartment":"c",
"formula":"C10H14N5O6PS2"
},
{
"id":"4mop_c",
"name":"4-Methyl-2-oxopentanoate",
"compartment":"c",
"formula":"C6H10O3"
},
{
"id":"4mpetz_c",
"name":"4-Methyl-5-(2-phosphoethyl)-thiazole",
"compartment":"c",
"formula":"C6H10NO4PS"
},
{
"id":"5mthf_c",
"name":"5-Methyltetrahydrofolate",
"compartment":"c",
"formula":"C20H25N7O6"
},
{
"id":"mhpglu_c",
"name":"5-Methyltetrahydropteroyltri-L-glutamate",
"compartment":"c",
"formula":"C30H39N9O12"
},
{
"id":"5mdr1p_c",
"name":"S-Methyl-5-thio-D-ribose 1-phosphate",
"compartment":"c",
"formula":"C6H13O7PS"
},
{
"id":"mycocerosoylacp_c",
"name":"Mycocerosoyl ACP lumped compound",
"compartment":"c",
"formula":"C30H59OSR"
},
{
"id":"mycolipanoate_c",
"name":"Mycolipanoate",
"compartment":"c",
"formula":"C27H54O2"
},
{
"id":"mycolipdienoate_c",
"name":"Mycolipdienoate",
"compartment":"c",
"formula":"C27H50O2"
},
{
"id":"mycolipenoate_c",
"name":"Mycolipenoate",
"compartment":"c",
"formula":"C27H52O2"
},
{
"id":"msh_c",
"name":"Mycothiol",
"compartment":"c",
"formula":"C17H30N2O12S"
},
{
"id":"n6hlysocdce_c",
"name":"N6-Hydroxy-L-lysine coupled to octadecanoyl group",
"compartment":"c",
"formula":"C24H48N2O4"
},
{
"id":"n6hlysocdc_c",
"name":"N6-Hydroxy-L-lysine coupled to octadecenoyl group",
"compartment":"c",
"formula":"C24H46N2O4"
},
{
"id":"n6hlysmal_c",
"name":"N6-Hydroxy-L-lysine coupled to malonyl group",
"compartment":"c",
"formula":"C9H16N2O6"
},
{
"id":"n6hlys_c",
"name":"N6-Hydroxy-L-lysine",
"compartment":"c",
"formula":"C6H14N2O3"
},
{
"id":"dnad_c",
"name":"Deamino-NAD+",
"compartment":"c",
"formula":"C21H27N6O15P2"
},
{
"id":"nicrns_c",
"name":"Nicotinate D-ribonucleoside",
"compartment":"c",
"formula":"C11H14NO6"
},
{
"id":"nicrnt_c",
"name":"Nicotinate D-ribonucleotide",
"compartment":"c",
"formula":"C11H15NO9P"
},
{
"id":"acyc_c",
"name":"N-acetyl-L-cysteine",
"compartment":"c",
"formula":"C5H9NO3S"
},
{
"id":"nac_c",
"name":"Nicotinate",
"compartment":"c",
"formula":"C6H5NO2"
},
{
"id":"nac_e",
"name":"Nicotinate",
"compartment":"e",
"formula":"C6H5NO2"
},
{
"id":"nadh_c",
"name":"NADH",
"compartment":"c",
"formula":"C21H29N7O14P2"
},
{
"id":"nadph_c",
"name":"NADPH",
"compartment":"c",
"formula":"C21H30N7O17P3"
},
{
"id":"nadp_c",
"name":"NADP+",
"compartment":"c",
"formula":"C21H29N7O17P3"
},
{
"id":"nad_c",
"name":"NAD+",
"compartment":"c",
"formula":"C21H28N7O14P2"
},
{
"id":"acgam1p_c",
"name":"N-Acetyl-alpha-D-glucosamine 1-phosphate",
"compartment":"c",
"formula":"C8H16NO9P"
},
{
"id":"unaga_c",
"name":"N-Acetyl-D-glucosaminyldiphosphoundecaprenol",
"compartment":"c",
"formula":"C63H105NO12P2"
},
{
"id":"iacgam3p_c",
"name":"1-O-(2-Acetamido-2-deoxy-alpha-D-glucopyranosyl)-1D-myo-inositol 3-phosphate",
"compartment":"c",
"formula":"C14H26NO14P"
},
{
"id":"iacgam_c",
"name":"1-O-[2-(Acetylamino)-2-deoxy-alpha-D-glucopyranosyl]-D-myo-Inositol",
"compartment":"c",
"formula":"C14H25NO11"
},
{
"id":"acg5p_c",
"name":"N-Acetyl-L-glutamate 5-phosphate",
"compartment":"c",
"formula":"C7H12NO8P"
},
{
"id":"acg5sa_c",
"name":"N-Acetyl-L-glutamate 5-semialdehyde",
"compartment":"c",
"formula":"C7H11NO4"
},
{
"id":"acglu_c",
"name":"N-Acetyl-L-glutamate",
"compartment":"c",
"formula":"C7H11NO5"
},
{
"id":"rnam_c",
"name":"Nicotinamide-beta-riboside",
"compartment":"c",
"formula":"C11H15N2O5"
},
{
"id":"nmn_c",
"name":"Nicotinamide D-ribonucleotide",
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"formula":"C11H15N2O8P"
},
{
"id":"ncam_c",
"name":"Nicotinamide",
"compartment":"c",
"formula":"C6H6N2O"
},
{
"id":"acorn_c",
"name":"N-Acetylornithine",
"compartment":"c",
"formula":"C7H14N2O3"
},
{
"id":"na1_c",
"name":"Sodium",
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"formula":"Na"
},
{
"id":"na1_e",
"name":"Sodium",
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"formula":"Na"
},
{
"id":"igam_c",
"name":"1-O-(2-Amino-2-deoxy-alpha-D-glucopyranosyl)-1D-myo-inositol",
"compartment":"c",
"formula":"C12H23NO10"
},
{
"id":"nh3_c",
"name":"NH3",
"compartment":"c",
"formula":"NH3"
},
{
"id":"nh3_e",
"name":"NH3",
"compartment":"e",
"formula":"NH3"
},
{
"id":"nh4oh_c",
"name":"NH4OH",
"compartment":"c",
"formula":"NH5O"
},
{
"id":"ni2_c",
"name":"Nickel",
"compartment":"c",
"formula":"Ni"
},
{
"id":"ni2_e",
"name":"Nickel",
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"formula":"Ni"
},
{
"id":"no2_c",
"name":"Nitrite",
"compartment":"c",
"formula":"HNO2"
},
{
"id":"no2_e",
"name":"Nitrite",
"compartment":"e",
"formula":"HNO2"
},
{
"id":"no3_c",
"name":"Nitrate",
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"formula":"HNO3"
},
{
"id":"no3_e",
"name":"Nitrate",
"compartment":"e",
"formula":"HNO3"
},
{
"id":"nondca_c",
"name":"Nonadecanoic acid",
"compartment":"c",
"formula":"C19H38O2"
},
{
"id":"nondca_e",
"name":"Nonadecanoic acid",
"compartment":"e",
"formula":"C19H38O2"
},
{
"id":"nondcaACP_c",
"name":"nonadecanoyl-ACP",
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"formula":"C19H37OSR"
},
{
"id":"nondcacoa_c",
"name":"nonadecanoyl-COA",
"compartment":"c",
"formula":"C40H72N7O17P3S"
},
{
"id":"nndccoa_c",
"name":"Nonanoyl-CoA",
"compartment":"c",
"formula":"C30H52N7O17P3S"
},
{
"id":"no_c",
"name":"Nitric oxide",
"compartment":"c",
"formula":"HNO"
},
{
"id":"no_e",
"name":"Nitric oxide",
"compartment":"e",
"formula":"HNO"
},
{
"id":"pran_c",
"name":"N-(5-Phospho_D-ribosyl)anthranilate",
"compartment":"c",
"formula":"C12H16NO9P"
},
{
"id":"o2_c",
"name":"Oxygen",
"compartment":"c",
"formula":"O2"
},
{
"id":"o2_e",
"name":"Oxygen",
"compartment":"e",
"formula":"O2"
},
{
"id":"achms_c",
"name":"O-Acetyl-L-homoserine",
"compartment":"c",
"formula":"C6H11NO4"
},
{
"id":"oaa_c",
"name":"Oxaloacetate",
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"formula":"C4H4O5"
},
{
"id":"2obut_c",
"name":"2-Oxobutanoate",
"compartment":"c",
"formula":"C4H6O3"
},
{
"id":"ocholc5coa_c",
"name":"CoA-22-one-cholest-4-en-3-one C5 side chain",
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"formula":"C45H68N7O19P3S"
},
{
"id":"ocholc8coa_c",
"name":"CoA-24-one-cholest-4-en-3-one C8 side chain",
"compartment":"c",
"formula":"C48H74N7O19P3S"
},
{
"id":"ochol_c",
"name":"26-Oxocholest-4-en-3-one",
"compartment":"c",
"formula":"C27H42O2"
},
{
"id":"occACP_c",
"name":"octacosanoyl-ACP",
"compartment":"c",
"formula":"C28H55OSR"
},
{
"id":"occcoa_c",
"name":"octacosanoyl-COA",
"compartment":"c",
"formula":"C49H90N7O17P3S"
},
{
"id":"ocdca_c",
"name":"Stearate",
"compartment":"c",
"formula":"C18H36O2"
},
{
"id":"ocACP_c",
"name":"Octadecanoyl-[acyl-carrier protein]",
"compartment":"c",
"formula":"C18H35OSR"
},
{
"id":"ocdcaAMP_c",
"name":"octadecanoyl AMP",
"compartment":"c",
"formula":"C28H48N5O8P"
},
{
"id":"ocdceACP_c",
"name":"(2E)-Octadecenoyl-[acp]",
"compartment":"c",
"formula":"C18H33OSR"
},
{
"id":"occoa_c",
"name":"Octanoyl-CoA",
"compartment":"c",
"formula":"C29H50N7O17P3S"
},
{
"id":"octaptcACP_c",
"name":"C58-acyl-ACP",
"compartment":"c",
"formula":"C58H115OSR"
},
{
"id":"octatetcACP_c",
"name":"C48-acyl-ACP",
"compartment":"c",
"formula":"C48H95OSR"
},
{
"id":"octatriacACP_c",
"name":"C38-acyl-ACP",
"compartment":"c",
"formula":"C38H75OSR"
},
{
"id":"stcoa_c",
"name":"Stearoyl-CoA",
"compartment":"c",
"formula":"C39H70N7O17P3S"
},
{
"id":"3c4mop_c",
"name":"(2S)-2-Isopropyl-3-oxosuccinate",
"compartment":"c",
"formula":"C7H10O5"
},
{
"id":"orot5p_c",
"name":"Orotidine 5-phosphate",
"compartment":"c",
"formula":"C10H13N2O11P"
},
{
"id":"3mob_c",
"name":"3-Methyl-2-oxobutanoic acid",
"compartment":"c",
"formula":"C5H8O3"
},
{
"id":"octdp_c",
"name":"all-trans-Octaprenyl diphosphate",
"compartment":"c",
"formula":"C40H68O7P2"
},
{
"id":"orn_c",
"name":"L-Ornithine",
"compartment":"c",
"formula":"C5H12N2O2"
},
{
"id":"orn_e",
"name":"L-Ornithine",
"compartment":"e",
"formula":"C5H12N2O2"
},
{
"id":"orot_c",
"name":"Orotate",
"compartment":"c",
"formula":"C5H4N2O4"
},
{
"id":"sbzcoa_c",
"name":"2-Succinylbenzoyl-CoA",
"compartment":"c",
"formula":"C32H44N7O20P3S"
},
{
"id":"sucbz_c",
"name":"2-Succinylbenzoate",
"compartment":"c",
"formula":"C11H10O5"
},
{
"id":"suchms_c",
"name":"O-Succinyl-L-homoserine",
"compartment":"c",
"formula":"C8H13NO6"
},
{
"id":"trdox_c",
"name":"Thioredoxin disulfide",
"compartment":"c",
"formula":"C10H12N4O4S2R4"
},
{
"id":"oxalcoa_c",
"name":"Oxalyl-CoA",
"compartment":"c",
"formula":"C23H36N7O19P3S"
},
{
"id":"3mop_c",
"name":"(S)-3-Methyl-2-oxopentanoic acid",
"compartment":"c",
"formula":"C6H10O3"
},
{
"id":"oxa_c",
"name":"Oxalate",
"compartment":"c",
"formula":"C2H2O4"
},
{
"id":"1pyr5c_c",
"name":"(S)-1-Pyrroline-5-carboxylate",
"compartment":"c",
"formula":"C5H7NO2"
},
{
"id":"thp2c_c",
"name":"Delta-1-piperideine-6-L-carboxylate",
"compartment":"c",
"formula":"C6H9NO2"
},
{
"id":"4abz_c",
"name":"4-Aminobenzoate",
"compartment":"c",
"formula":"C7H7NO2"
},
{
"id":"4abz_e",
"name":"4-Aminobenzoate",
"compartment":"e",
"formula":"C7H7NO2"
},
{
"id":"pant_c",
"name":"(R)-Pantoate",
"compartment":"c",
"formula":"C6H12O4"
},
{
"id":"paps_c",
"name":"3-Phosphoadenylyl sulfate",
"compartment":"c",
"formula":"C10H15N5O13P2S"
},
{
"id":"pap_c",
"name":"Adenosine 3,5-bisphosphate",
"compartment":"c",
"formula":"C10H15N5O10P2"
},
{
"id":"pa160190_c",
"name":"Phosphatidate",
"compartment":"c",
"formula":"C38H75O8P"
},
{
"id":"ptcnylACP_c",
"name":"C50-acyl-ACP",
"compartment":"c",
"formula":"C50H99OSR"
},
{
"id":"ptdca_c",
"name":"Pentadecanoic acid",
"compartment":"c",
"formula":"C15H30O2"
},
{
"id":"ptdca_e",
"name":"Pentadecanoic acid",
"compartment":"e",
"formula":"C15H30O2"
},
{
"id":"ptdcaACP_c",
"name":"pentadecanoyl-ACP",
"compartment":"c",
"formula":"C15H29OSR"
},
{
"id":"ptdcacoa_c",
"name":"pentadecanoyl-CoA",
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"formula":"C36H64N7O17P3S"
},
{
"id":"pmtricoa_c",
"name":"PENTA-METHYL-TRICONTANOYL-COA",
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"formula":"C52H96N7O17P3S"
},
{
"id":"pmtri_c",
"name":"PENTA-METHYL-TRICONTANOYL",
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"formula":"C31H62O2"
},
{
"id":"ptcoa_c",
"name":"Pentanoyl-CoA",
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"formula":"C26H44N7O17P3S"
},
{
"id":"peptido_TB_c",
"name":"Peptidoglycan",
"compartment":"c",
"formula":"C37H58N7O21R2"
},
{
"id":"pep_c",
"name":"Phosphoenolpyruvate",
"compartment":"c",
"formula":"C3H5O6P"
},
{
"id":"pe_TB_c",
"name":"Phosphatidylethanolamine",
"compartment":"c",
"formula":"C40H80NO8P"
},
{
"id":"pgp160190_c",
"name":"Phosphatidylglycerophosphate",
"compartment":"c",
"formula":"C41H82O13P2"
},
{
"id":"pg160190_c",
"name":"Phosphatidylglycerol",
"compartment":"c",
"formula":"C41H81O10P"
},
{
"id":"phbz2_c",
"name":"p-hydroxybenzoic acid derivative II",
"compartment":"c",
"formula":"C29H45O15"
},
{
"id":"phbz1g_c",
"name":"Glycosylated p-HBAD I",
"compartment":"c",
"formula":"C26H39O15"
},
{
"id":"phbz1_c",
"name":"p-hydroxybenzoic acid derivative I",
"compartment":"c",
"formula":"C14H18O7"
},
{
"id":"ppdimab_c",
"name":"Phenol-phthiodiocerol dimycocerosate PHDIMA membrane associated",
"compartment":"c",
"formula":"C102H194O6"
},
{
"id":"ppdima_c",
"name":"Phenol-phthiodiocerol dimycocerosate PHDIMA",
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"formula":"C102H194O6"
},
{
"id":"ppdimbm_c",
"name":"Phenol-phthiodiolone dimycocerosate PHDIMB membrane associated",
"compartment":"c",
"formula":"C101H190O6"
},
{
"id":"ppdimb_c",
"name":"Phenol-phthiodiolone dimycocerosate PHDIMB",
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"formula":"C101H190O6"
},
{
"id":"ph24dm3k911dhc35acylacp_c",
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"formula":"C41H71O5SR"
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{
"id":"ph24dm3k911dhc35oate_c",
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"formula":"C41H72O6"
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{
"id":"ph24dm3k911dhc37acylacp_c",
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"formula":"C43H75O5SR"
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{
"id":"ph24dm3k911dhc37oate_c",
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"formula":"C43H76O6"
},
{
"id":"ph2m79dhc32acylacp_c",
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"formula":"C38H67O4SR"
},
{
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"formula":"C40H71O4SR"
},
{
"id":"ph35dhc27acylacp_c",
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"formula":"C33H57O4SR"
},
{
"id":"ph35dhc29acylacp_c",
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"formula":"C35H61O4SR"
},
{
"id":"ph3hc25acylacp_c",
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"formula":"C31H53O3SR"
},
{
"id":"ph3hc27acylacp_c",
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"formula":"C33H57O3SR"
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{
"id":"ph4m3k911dhc34acylacp_c",
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"formula":"C40H69O5SR"
},
{
"id":"ph4m3k911dhc34oate_c",
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"formula":"C40H70O6"
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{
"id":"ph4m3k911dhc36acylacp_c",
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"formula":"C42H73O5SR"
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{
"id":"ph4m3k911dhc36oate_c",
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"formula":"C42H74O6"
},
{
"id":"ph57dhc29acylacp_c",
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"formula":"C35H61O4SR"
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{
"id":"ph57dhc31acylacp_c",
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"formula":"C37H65O4SR"
},
{
"id":"phpt_c",
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"formula":"C31H54O3"
},
{
"id":"phptACP_c",
"name":"Phenolpentacosanoyl ACP",
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"formula":"C31H53O2SR"
},
{
"id":"phptAMP_c",
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"formula":"C41H66N5O9P"
},
{
"id":"pphthdlC33_c",
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"formula":"C39H70O4"
},
{
"id":"pphthdlC34_c",
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"formula":"C40H72O4"
},
{
"id":"pphthdlC35_c",
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"formula":"C41H74O4"
},
{
"id":"pphthdlC36_c",
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"formula":"C42H76O4"
},
{
"id":"pphthdl_c",
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"formula":"C41H74O4"
},
{
"id":"phtri_c",
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"formula":"C29H50O3"
},
{
"id":"phtriACP_c",
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"formula":"C29H49O2SR"
},
{
"id":"phtriAMP_c",
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},
{
"id":"pphn_c",
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},
{
"id":"phe__L_c",
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},
{
"id":"phe__L_e",
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"formula":"C9H11NO2"
},
{
"id":"pc_TB_c",
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},
{
"id":"pc_TB_e",
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{
"id":"phpyr_c",
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"formula":"C9H8O3"
},
{
"id":"3php_c",
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"formula":"C3H5O7P"
},
{
"id":"phom_c",
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"formula":"C4H10NO6P"
},
{
"id":"phthdlC32_c",
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"formula":"C32H64O3"
},
{
"id":"phthdlC33_c",
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"formula":"C33H66O3"
},
{
"id":"phthdlC34_c",
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"formula":"C34H68O3"
},
{
"id":"phthdlC35_c",
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},
{
"id":"phthdl_c",
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},
{
"id":"PIM1_c",
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{
"id":"PIM2_c",
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"formula":"C56H105O23P"
},
{
"id":"pmcoa_c",
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},
{
"id":"ptd1ino160190_c",
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},
{
"id":"pi_c",
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{
"id":"pi_e",
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},
{
"id":"pnto_c",
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},
{
"id":"pnto_e",
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},
{
"id":"ppbng_c",
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"formula":"C10H14N2O4"
},
{
"id":"gdptp_c",
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},
{
"id":"ppgpp_c",
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},
{
"id":"ppi_c",
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"formula":"H4P2O7"
},
{
"id":"ppm_c",
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"formula":"C61H101O9P"
},
{
"id":"pppi_c",
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"formula":"H5P3O10"
},
{
"id":"pendp_c",
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},
{
"id":"ppal_c",
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},
{
"id":"pram_c",
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"formula":"C5H12NO7P"
},
{
"id":"prbamp_c",
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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"formula":"C34H65OSR"
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{
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"formula":"C36H69OSR"
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{
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"formula":"C38H73OSR"
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{
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{
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{
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{
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"formula":"C46H89OSR"
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{
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"formula":"C48H93OSR"
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{
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{
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{
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"formula":"C52H101OSR"
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{
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"formula":"C54H105OSR"
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{
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"formula":"C56H109OSR"
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{
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{
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{
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{
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"formula":"C40H79OSR"
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{
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"formula":"C24H48O2"
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{
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{
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{
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"formula":"C34H60N5O8P"
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{
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"formula":"C14H28O2"
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{
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"formula":"C14H28O2"
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{
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"formula":"C35H62N7O17P3S"
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{
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"formula":"C7H9NO4"
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{
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"formula":"C54H107OSR"
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{
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"formula":"C44H87OSR"
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{
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"formula":"C34H67OSR"
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{
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"formula":"C24H30N8O9"
},
{
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"formula":"C19H23N7O6"
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{
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"formula":"C12H19N4O7P2S"
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{
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"formula":"C12H18N4O4PS"
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{
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"formula":"C12H17N4OS"
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{
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"formula":"C29H37N9O12"
},
{
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"formula":"C4H9NO3"
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{
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"formula":"C4H9NO3"
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{
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"formula":"C5H6N2O2"
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{
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{
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{
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{
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{
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