Information for 8-AGCATGACAG (Motif 17)

T G C A C A T G A T G C G C T A C G A T A C T G G T C A A G T C C G T A C T A G
Reverse Opposite:
A G T C A C G T A C T G A C G T T G A C G C T A C G A T A T C G G T A C A C G T
p-value:1e-8
log p-value:-1.935e+01
Information Content per bp:1.842
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif426.5
Percentage of Background Sequences with motif3.22%
Average Position of motif in Targets655.4 +/- 258.1bp
Average Position of motif in Background571.1 +/- 490.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.74
Offset:3
Orientation:forward strand
Alignment:AGCATGACAG
---TTGACAG
 T G C A C A T G A T G C G C T A C G A T A C T G G T C A A G T C C G T A C T A G
A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.74
Offset:3
Orientation:forward strand
Alignment:AGCATGACAG-
---TTGACAGG
 T G C A C A T G A T G C G C T A C G A T A C T G G T C A A G T C C G T A C T A G A C G T
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.73
Offset:3
Orientation:forward strand
Alignment:AGCATGACAG-
---TTGACAGC
 T G C A C A T G A T G C G C T A C G A T A C T G G T C A A G T C C G T A C T A G A C G T
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGCATGACAG------
GATATTGACAGCTGCGT
 A C G T T G C A C A T G A T G C G C T A C G A T A C T G G T C A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGCATGACAG
-NCGTGACN-
 T G C A C A T G A T G C G C T A C G A T A C T G G T C A A G T C C G T A C T A G
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AGCATGACAG
--RHTGWCAR
 T G C A C A T G A T G C G C T A C G A T A C T G G T C A A G T C C G T A C T A G
A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AGCATGACAG--
--VBTGWCAGCB
 T G C A C A T G A T G C G C T A C G A T A C T G G T C A A G T C C G T A C T A G A C G T A C G T
A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGCATGACAG------
NNATTGACAGGTGCTT
 T G C A C A T G A T G C G C T A C G A T A C T G G T C A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGCATGACAG------
GTATTGACAGGTNNTT
 T G C A C A T G A T G C G C T A C G A T A C T G G T C A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
C A T G A C G T C G T A C G A T G A C T A C T G C G T A A G T C C T G A C T A G T A C G G A C T T G C A G C T A G A C T G C A T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:AGCATGACAG-
-----CACAGN
 T G C A C A T G A T G C G C T A C G A T A C T G G T C A A G T C C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C