Information for 9-TGGACRCTTT (Motif 18)

C G A T A C T G A C T G C G T A A G T C C T G A A G T C C G A T A G C T A C G T
Reverse Opposite:
C G T A C T G A C G T A A C T G A G C T A C T G A C G T A G T C A G T C C G T A
p-value:1e-8
log p-value:-1.909e+01
Information Content per bp:1.876
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif187.1
Percentage of Background Sequences with motif1.41%
Average Position of motif in Targets540.7 +/- 340.9bp
Average Position of motif in Background504.4 +/- 400.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGGACRCTTT--
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A A G T C C T G A A G T C C G A T A G C T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGGACRCTTT--
AGGVNCCTTTGT
 C G A T A C T G A C T G C G T A A G T C C T G A A G T C C G A T A G C T A C G T A C G T A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

PROX1/MA0794.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGGACRCTTT-
CAAGACGCCTTA
 A C G T C G A T A C T G A C T G C G T A A G T C C T G A A G T C C G A T A G C T A C G T A C G T
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGGACRCTTT----
VAGRACAKWCTGTYC
 A C G T C G A T A C T G A C T G C G T A A G T C C T G A A G T C C G A T A G C T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

HINFP/MA0131.2/Jaspar

Match Rank:5
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TGGACRCTTT
NCGCGGACGTTG-
 A C G T A C G T A C G T C G A T A C T G A C T G C G T A A G T C C T G A A G T C C G A T A G C T A C G T
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGGACRCTTT
AAGGTCAC---
 A C G T C G A T A C T G A C T G C G T A A G T C C T G A A G T C C G A T A G C T A C G T
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

TBX3/MA1566.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGGACRCTTT
NTCACACCTN
 C G A T A C T G A C T G C G T A A G T C C T G A A G T C C G A T A G C T A C G T
A G C T G A C T T A G C T C G A A G T C C T G A A T G C A T G C G A C T G A T C

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGGACRCTTT
TTTCACACCTN
 A C G T C G A T A C T G A C T G C G T A A G T C C T G A A G T C C G A T A G C T A C G T
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGGACRCTTT----
VAGRACAKNCTGTBC
 A C G T C G A T A C T G A C T G C G T A A G T C C T G A A G T C C G A T A G C T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

ZNF652/MA1657.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGGACRCTTT-
NTTAACTCTTTN
 A C G T C G A T A C T G A C T G C G T A A G T C C T G A A G T C C G A T A G C T A C G T A C G T
C G A T A C G T C G A T T C G A G C T A G A T C G A C T T A G C G A C T A C G T A G C T T G A C