Information for 16-TGCAGCCCATCT (Motif 19)

C G A T T C A G T A G C G T C A C T A G A G T C A G T C A G T C G T C A C G A T A T G C C A G T
Reverse Opposite:
G C T A T A C G C G T A A C G T A C T G C T A G T A C G G A T C A C G T A T C G A G T C G C T A
p-value:1e-8
log p-value:-1.909e+01
Information Content per bp:1.741
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif8.33%
Number of Background Sequences with motif187.6
Percentage of Background Sequences with motif1.42%
Average Position of motif in Targets659.2 +/- 355.7bp
Average Position of motif in Background634.1 +/- 443.2bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.39
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:1
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:TGCAGCCCATCT-----
----NNCCATCTGTNNN
 C G A T T C A G T A G C G T C A C T A G A G T C A G T C A G T C G T C A C G A T A T G C C A G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

NEUROD1/MA1109.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TGCAGCCCATCT----
---NNNCCATCTGTNN
 C G A T T C A G T A G C G T C A C T A G A G T C A G T C A G T C G T C A C G A T A T G C C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TGCAGCCCATCT--
NNNTCCATCCCATAANN
 A C G T A C G T A C G T C G A T T C A G T A G C G T C A C T A G A G T C A G T C A G T C G T C A C G A T A T G C C A G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

ZNF449/MA1656.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGCAGCCCATCT--
CCAAGCCCAACCAG
 C G A T T C A G T A G C G T C A C T A G A G T C A G T C A G T C G T C A C G A T A T G C C A G T A C G T A C G T
G T A C T G A C T G C A G C T A C T A G T A G C G T A C G T A C G C T A C T G A T G A C G T A C G T C A T A C G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TGCAGCCCATCT---
-----ACCATCTGTT
 C G A T T C A G T A G C G T C A C T A G A G T C A G T C A G T C G T C A C G A T A T G C C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.64
Offset:5
Orientation:forward strand
Alignment:TGCAGCCCATCT---
-----GCCATCTGTT
 C G A T T C A G T A G C G T C A C T A G A G T C A G T C A G T C G T C A C G A T A T G C C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

HAND2/MA1638.1/Jaspar

Match Rank:7
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:TGCAGCCCATCT---
-----NNCATCTGNN
 C G A T T C A G T A G C G T C A C T A G A G T C A G T C A G T C G T C A C G A T A T G C C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGCAGCCCATCT------
-CCNNACCATCTGGCCTN
 C G A T T C A G T A G C G T C A C T A G A G T C A G T C A G T C G T C A C G A T A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer

Match Rank:9
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TGCAGCCCATCT---
-----SMCATCTGKH
 C G A T T C A G T A G C G T C A C T A G A G T C A G T C A G T C G T C A C G A T A T G C C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T G C A A G T C C G T A A C G T T G A C A C G T A C T G A C T G G C A T

TWIST1/MA1123.2/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGCAGCCCATCT-----
----NNACATCTGGNNN
 C G A T T C A G T A G C G T C A C T A G A G T C A G T C A G T C G T C A C G A T A T G C C A G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T C G A T G C A T G A C C T G A A C G T T G A C G C A T C A T G A C T G G C T A G C T A G C A T