Information for 13-TCAATAKAAA (Motif 23)

A G C T G T A C C G T A G T C A A C G T G T C A C A T G C T G A G T C A G T C A
Reverse Opposite:
A C G T A C G T A G C T G T A C A C G T G T C A A C G T G C A T A C T G T C G A
p-value:1e-7
log p-value:-1.756e+01
Information Content per bp:1.752
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif467.0
Percentage of Background Sequences with motif3.52%
Average Position of motif in Targets660.3 +/- 304.2bp
Average Position of motif in Background536.6 +/- 401.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TCAATAKAAA
RRTCAATA----
 A C G T A C G T A G C T G T A C C G T A G T C A A C G T G T C A C A T G C T G A G T C A G T C A
C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A A C G T A C G T A C G T A C G T

HOXB13/MA0901.2/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TCAATAKAAA--
AACCAATAAAATTT
 A C G T A C G T A G C T G T A C C G T A G T C A A C G T G T C A C A T G C T G A G T C A G T C A A C G T A C G T
C G T A C G T A G T A C G A T C G C T A C G T A A C G T C G T A G C T A G C T A G C T A G C A T G C A T G C A T

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TCAATAKAAA---
CTACCAATAAAATTCT
 A C G T A C G T A C G T A G C T G T A C C G T A G T C A A C G T G T C A C A T G C T G A G T C A G T C A A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T

ONECUT1/MA0679.2/Jaspar

Match Rank:4
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------TCAATAKAAA
AAAAAATCAATAAATA
 A C G T A C G T A C G T A C G T A C G T A C G T A G C T G T A C C G T A G T C A A C G T G T C A C A T G C T G A G T C A G T C A
C G T A C G T A C G T A G C T A C T G A C T G A G C A T G T A C C T G A C G T A G A C T C T G A G C T A G C T A G C A T G C T A

PH0057.1_Hoxb13/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TCAATAKAAA---
AACCCAATAAAATTCG
 A C G T A C G T A C G T A G C T G T A C C G T A G T C A A C G T G T C A C A T G C T G A G T C A G T C A A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

HOXA13/MA0650.2/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCAATAKAAA
CCCAATAAAAC
 A C G T A G C T G T A C C G T A G T C A A C G T G T C A C A T G C T G A G T C A G T C A
T G A C T A G C A G T C G T C A C G T A A C G T C T G A C T G A C G T A G T C A G T A C

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TCAATAKAAA
DGATCRATAN---
 A C G T A C G T A C G T A G C T G T A C C G T A G T C A A C G T G T C A C A T G C T G A G T C A G T C A
C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T

CDX2/MA0465.2/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCAATAKAAA
AAGCAATAAAAA
 A C G T A C G T A G C T G T A C C G T A G T C A A C G T G T C A C A T G C T G A G T C A G T C A
C T G A C G T A C T A G G A T C G T C A C T G A A G C T C G T A C G T A G C T A C G T A G C T A

HOXD13/MA0909.2/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCAATAKAAA
CCCAATAAAAC
 A C G T A G C T G T A C C G T A G T C A A C G T G T C A C A T G C T G A G T C A G T C A
T A G C T A G C A G T C G T C A C T G A C G A T C G T A C T G A G T C A T G C A T G A C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TCAATAKAAA
HNRAATCAAT-----
 A C G T A C G T A C G T A C G T A C G T A G C T G T A C C G T A G T C A A C G T G T C A C A T G C T G A G T C A G T C A
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T