Information for 19-GGGAGACTGCAC (Motif 24)

A T C G A C T G A C T G T C G A C T A G T G C A A T G C C G A T T A C G A T G C G C T A G T A C
Reverse Opposite:
C A T G C G A T A T C G A T G C C G T A A T C G A C G T A G T C A G C T G T A C G T A C A T G C
p-value:1e-7
log p-value:-1.751e+01
Information Content per bp:1.749
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif8.80%
Number of Background Sequences with motif234.2
Percentage of Background Sequences with motif1.77%
Average Position of motif in Targets794.7 +/- 343.2bp
Average Position of motif in Background742.9 +/- 403.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGGAGACTGCAC----
TACGAGACTCCTCTAAC
 A C G T A T C G A C T G A C T G T C G A C T A G T G C A A T G C C G A T T A C G A T G C G C T A G T A C A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

ZNF460/MA1596.1/Jaspar

Match Rank:2
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGGAGACTGCAC-
CTCGGGAGGCTGAGGC
 A C G T A C G T A C G T A T C G A C T G A C T G T C G A C T A G T G C A A T G C C G A T T A C G A T G C G C T A G T A C A C G T
A G T C A G C T A G T C T C A G T A C G T A C G G T C A T A C G T C A G G A T C A C G T T A C G T C G A T A C G T A C G A G T C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGGAGACTGCAC
GGGGGAATCCCC
 A T C G A C T G A C T G T C G A C T A G T G C A A T G C C G A T T A C G A T G C G C T A G T A C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGGAGACTGCAC----
AATCGCACTGCATTCCG
 A C G T A T C G A C T G A C T G T C G A C T A G T G C A A T G C C G A T T A C G A T G C G C T A G T A C A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGGAGACTGCAC
--TWGTCTGV--
 A T C G A C T G A C T G T C G A C T A G T G C A A T G C C G A T T A C G A T G C G C T A G T A C
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGGAGACTGCAC
CTGGCAGNCTGCCA
 A C G T A C G T A T C G A C T G A C T G T C G A C T A G T G C A A T G C C G A T T A C G A T G C G C T A G T A C
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

POL002.1_INR/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGGAGACTGCAC
--NNNANTGA--
 A T C G A C T G A C T G T C G A C T A G T G C A A T G C C G A T T A C G A T G C G C T A G T A C
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T

ZNF684/MA1600.1/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GGGAGACTGCAC
TAAAGGGGTGGACTGTAT
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G T C G A C T A G T G C A A T G C C G A T T A C G A T G C G C T A G T A C
A G C T G T C A C T G A C G T A C T A G C T A G A C T G T A C G G C A T C T A G A T C G T G C A T A G C G C A T C T A G A G C T T C G A G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGGAGACTGCAC
VBSYGTCTGG--
 A T C G A C T G A C T G T C G A C T A G T G C A A T G C C G A T T A C G A T G C G C T A G T A C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GGGAGACTGCAC
AGGTGNCAGACAG---
 A C G T A C G T A C G T A C G T A T C G A C T G A C T G T C G A C T A G T G C A A T G C C G A T T A C G A T G C G C T A G T A C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T