Information for 21-CRGAAACTTCTG (Motif 26)

T G A C C T A G A T C G G C T A C G T A C G T A A G T C A G C T A G C T A G T C C G A T A C T G
Reverse Opposite:
A G T C C G T A C T A G C T G A C T G A C T A G G C A T G C A T C G A T A T G C A G T C A C T G
p-value:1e-6
log p-value:-1.536e+01
Information Content per bp:1.741
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif6.02%
Number of Background Sequences with motif120.5
Percentage of Background Sequences with motif0.91%
Average Position of motif in Targets845.4 +/- 299.9bp
Average Position of motif in Background665.6 +/- 430.5bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OSR2/MA1646.1/Jaspar

Match Rank:1
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CRGAAACTTCTG---
---NNGCTTCTGTNN
 T G A C C T A G A T C G G C T A C G T A C G T A A G T C A G C T A G C T A G T C C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CRGAAACTTCTG---
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T A C G T T G A C C T A G A T C G G C T A C G T A C G T A A G T C A G C T A G C T A G T C C G A T A C T G A C G T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CRGAAACTTCTG
ADGGYAGYAGCATCT-
 A C G T A C G T A C G T A C G T T G A C C T A G A T C G G C T A C G T A C G T A A G T C A G C T A G C T A G T C C G A T A C T G
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CRGAAACTTCTG
-----GCTTCC-
 T G A C C T A G A T C G G C T A C G T A C G T A A G T C A G C T A G C T A G T C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CRGAAACTTCTG---
TAGAANVTTCTAGAA
 T G A C C T A G A T C G G C T A C G T A C G T A A G T C A G C T A G C T A G T C C G A T A C T G A C G T A C G T A C G T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A

Ptf1a/MA1618.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CRGAAACTTCTG---
--NNAACATCTGTNN
 T G A C C T A G A T C G G C T A C G T A C G T A A G T C A G C T A G C T A G T C C G A T A C T G A C G T A C G T A C G T
A C G T A C G T C A G T T G C A T C G A T G C A G A T C C T G A A C G T T G A C A G C T C T A G A C G T A C G T G C A T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CRGAAACTTCTG
AGGAAACAGCTG
 T G A C C T A G A T C G G C T A C G T A C G T A A G T C A G C T A G C T A G T C C G A T A C T G
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

HAND2/MA1638.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CRGAAACTTCTG--
----NNCATCTGNN
 T G A C C T A G A T C G G C T A C G T A C G T A A G T C A G C T A G C T A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T G A C A G T C T C G A A G C T T G A C A G C T T A C G A C T G G A C T

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CRGAAACTTCTG---
-----ACTTCCGGNT
 T G A C C T A G A T C G G C T A C G T A C G T A A G T C A G C T A G C T A G T C C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T G A C T A G T C A T G C A C T G A T C G A C G T G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CRGAAACTTCTG-----
CCNNACCATCTGGCCTN
 T G A C C T A G A T C G G C T A C G T A C G T A A G T C A G C T A G C T A G T C C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T