Information for 3-AGYCAAAG (Motif 31)

C G T A A C T G A G C T A G T C C G T A C G T A C G T A A C T G
Reverse Opposite:
A G T C A C G T A C G T C G A T C T A G C T G A A G T C A C G T
p-value:1e-5
log p-value:-1.355e+01
Information Content per bp:1.897
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif25.00%
Number of Background Sequences with motif1705.3
Percentage of Background Sequences with motif12.87%
Average Position of motif in Targets643.8 +/- 343.5bp
Average Position of motif in Background606.1 +/- 426.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----AGYCAAAG----
AAACAGACAAAGGAAT
 A C G T A C G T A C G T A C G T C G T A A C T G A G C T A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AGYCAAAG-
GAAAGTGAAAGT
 A C G T A C G T A C G T C G T A A C T G A G C T A G T C C G T A C G T A C G T A A C T G A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

TCF7/MA0769.2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AGYCAAAG--
ANATCAAAGNN
 A C G T C G T A A C T G A G C T A G T C C G T A C G T A C G T A A C T G A C G T A C G T
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGYCAAAG
AAAAGTCAA--
 A C G T A C G T A C G T C G T A A C T G A G C T A G T C C G T A C G T A C G T A A C T G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGYCAAAG
BCAGACWA--
 A C G T A C G T C G T A A C T G A G C T A G T C C G T A C G T A C G T A A C T G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGYCAAAG-
AAAACAAAGG
 A C G T C G T A A C T G A G C T A G T C C G T A C G T A C G T A A C T G A C G T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

SOX10/MA0442.2/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGYCAAAG--
AAAACAAAGAA
 A C G T C G T A A C T G A G C T A G T C C G T A C G T A C G T A A C T G A C G T A C G T
C T G A C T G A T G C A G C T A A G T C C G T A G C T A G C T A A C T G T C G A T G C A

HNF4G/MA0484.2/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGYCAAAG------
-TCCAAAGTCCAGA
 C G T A A C T G A G C T A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A G T C G A T C T C G A T C G A C T G A A C T G C A G T G A T C G A T C C G T A T C A G C T G A

HNF4A/MA0114.4/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AGYCAAAG------
-TCCAAAGTCCAAA
 C G T A A C T G A G C T A G T C C G T A C G T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G A T C G A T C T G C A T C G A C T G A A C T G C A G T G A T C G A T C C G T A C T G A C T G A

PRDM1/MA0508.3/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGYCAAAG--
NAGAGAAAGNA
 A C G T C G T A A C T G A G C T A G T C C G T A C G T A C G T A A C T G A C G T A C G T
C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A