Information for 21-GATCCTGGCA (Motif 34)

A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C C G T A A C T G A C T G C G T A A C G T A G T C
p-value:1e-4
log p-value:-1.131e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.78%
Number of Background Sequences with motif27.5
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets612.8 +/- 261.8bp
Average Position of motif in Background685.3 +/- 419.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GATCCTGGCA-
---CTTGGCAA
 A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

NFIC/MA0161.2/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GATCCTGGCA--
-TACTTGGCAGA
 A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GATCCTGGCA
ACATCCTGNT-
 A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C C G T A
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GATCCTGGCA--
---NTTGGCANN
 A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GATCCTGGCA
--VGCTGGCA
 A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C C G T A
A C G T A C G T T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GATCCTGGCA-
--TNNGGGCAG
 A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GATCCTGGCA--
--NNTTGGCANN
 A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GATCCTGGCA-
---GCTGTCAA
 A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GATCCTGGCA-
-TTCCNGGAAG
 A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T
A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GATCCTGGCA---
RGSMTBCTGGGAAAT
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T