Information for 4-TCGAAGGK (Motif 37)

A C G T G T A C A C T G G T C A C G T A A C T G A T C G A C T G
Reverse Opposite:
G T A C A T G C A G T C A C G T A C G T A G T C A C T G C G T A
p-value:1e-4
log p-value:-9.655e+00
Information Content per bp:1.882
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif21.30%
Number of Background Sequences with motif1567.4
Percentage of Background Sequences with motif11.83%
Average Position of motif in Targets680.9 +/- 338.2bp
Average Position of motif in Background650.3 +/- 411.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:TCGAAGGK
-NGAAGC-
 A C G T G T A C A C T G G T C A C G T A A C T G A T C G A C T G
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

HLTF/MA0109.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TCGAAGGK-
NNATAAGGNN
 A C G T A C G T G T A C A C T G G T C A C G T A A C T G A T C G A C T G A C G T
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TCGAAGGK---
NBYCAAGGTCAC
 A C G T A C G T G T A C A C T G G T C A C G T A A C T G A T C G A C T G A C G T A C G T A C G T
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TCGAAGGK
ACWTCAAAGG-
 A C G T A C G T A C G T A C G T G T A C A C T G G T C A C G T A A C T G A T C G A C T G
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T

ZKSCAN1/MA1585.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCGAAGGK-
ATAGTAGGTG
 A C G T A C G T G T A C A C T G G T C A C G T A A C T G A T C G A C T G A C G T
T C G A A G C T T G C A C T A G A C G T G T C A A T C G C A T G A G C T T A C G

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TCGAAGGK
ACATCAAAGG-
 A C G T A C G T A C G T A C G T G T A C A C T G G T C A C G T A A C T G A T C G A C T G
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

TCF7/MA0769.2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TCGAAGGK
ANATCAAAGNN
 A C G T A C G T A C G T A C G T G T A C A C T G G T C A C G T A A C T G A T C G A C T G
C G T A A T G C G C T A G C A T T G A C G C T A G C T A C G T A A C T G T C A G T G C A

LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TCGAAGGK
ASATCAAAGG-
 A C G T A C G T A C G T A C G T G T A C A C T G G T C A C G T A A C T G A T C G A C T G
C T G A A T C G G C T A G C A T T A G C C G T A T C G A C T G A T C A G T A C G A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCGAAGGK---
-TCAAGGTCAT
 A C G T G T A C A C T G G T C A C G T A A C T G A T C G A C T G A C G T A C G T A C G T
A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------TCGAAGGK---
NANAGATCAAAGGGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C T G G T C A C G T A A C T G A T C G A C T G A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T