Information for 6-CCAACTGT (Motif 39)

A G T C A G T C C G T A C G T A A G T C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G A C G T A C G T A C T G A C T G
p-value:1e-2
log p-value:-6.343e+00
Information Content per bp:1.530
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif7.41%
Number of Background Sequences with motif419.5
Percentage of Background Sequences with motif3.17%
Average Position of motif in Targets681.9 +/- 319.3bp
Average Position of motif in Background587.2 +/- 408.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB/MA0100.3/Jaspar

Match Rank:1
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-CCAACTGT-
ACCAACTGTC
 A C G T A G T C A G T C C G T A C G T A A G T C A C G T A C T G A C G T A C G T
G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

PB0150.1_Mybl1_2/Jaspar

Match Rank:2
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---CCAACTGT----
CGACCAACTGCCGTG
 A C G T A C G T A C G T A G T C A G T C C G T A C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:3
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:CCAACTGT--
CCAACTGCCA
 A G T C A G T C C G T A C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

NEUROD1/MA1109.1/Jaspar

Match Rank:4
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---CCAACTGT--
NNNCCATCTGTNN
 A C G T A C G T A C G T A G T C A G T C C G T A C G T A A G T C A C G T A C T G A C G T A C G T A C G T
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CCAACTGT-
GCCATCTGTT
 A C G T A G T C A G T C C G T A C G T A A G T C A C G T A C T G A C G T A C G T
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-CCAACTGT-
ACCATCTGTT
 A C G T A G T C A G T C C G T A C G T A A G T C A C G T A C T G A C G T A C G T
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

PB0149.1_Myb_2/Jaspar

Match Rank:7
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---CCAACTGT-----
CGACCAACTGCCATGC
 A C G T A C G T A C G T A G T C A G T C C G T A C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

NEUROG2(var.2)/MA1642.1/Jaspar

Match Rank:8
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CCAACTGT---
NNCCATCTGTNNN
 A C G T A C G T A G T C A G T C C G T A C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T T C A G T G A C G T A C C T G A A C G T T G A C A G C T A T C G A C G T A G C T G A T C G A T C

PB0047.1_Myf6_1/Jaspar

Match Rank:9
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---CCAACTGT-----
CNGACACCTGTTCNNN
 A C G T A C G T A C G T A G T C A G T C C G T A C G T A A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:10
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CCAACTGT--
CCAGCTGTTN
 A G T C A G T C C G T A C G T A A G T C A C G T A C T G A C G T A C G T A C G T
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A