Information for 3-TGAGGTGACT (Motif 6)

C G A T A T C G G C T A C A T G A C T G G A C T A C T G T C G A A T G C A C G T
Reverse Opposite:
C G T A A T C G A G C T T A G C C T G A T G A C G T A C C G A T A T G C C G T A
p-value:1e-10
log p-value:-2.472e+01
Information Content per bp:1.823
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif13.89%
Number of Background Sequences with motif410.7
Percentage of Background Sequences with motif3.10%
Average Position of motif in Targets586.8 +/- 359.6bp
Average Position of motif in Background642.7 +/- 431.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF1/MA0595.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TGAGGTGACT
GTGGGGTGAT-
 A C G T C G A T A T C G G C T A C A T G A C T G G A C T A C T G T C G A A T G C A C G T
T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TGAGGTGACT
ATGGGGTGAT-
 A C G T C G A T A T C G G C T A C A T G A C T G G A C T A C T G T C G A A T G C A C G T
T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T

RUNX3/MA0684.2/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TGAGGTGACT
NNTTGAGGTTNN-
 A C G T A C G T A C G T C G A T A T C G G C T A C A T G A C T G G A C T A C T G T C G A A T G C A C G T
C T G A C G A T G A C T C G A T A C T G G C T A A C T G C T A G G A C T A G C T C G A T G C A T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGAGGTGACT
ATGGGGTGAT-
 A C G T C G A T A T C G G C T A C A T G A C T G G A C T A C T G T C G A A T G C A C G T
T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T A C G T

CREM/MA0609.2/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TGAGGTGACT--
GCAGTGACGTCACTGC
 A C G T A C G T A C G T A C G T C G A T A T C G G C T A C A T G A C T G G A C T A C T G T C G A A T G C A C G T A C G T A C G T
T A C G T G A C C T G A T C A G G A C T A T C G C T G A A G T C T C A G G A C T T A G C C T G A A G T C G A C T A C T G A T G C

ATF2/MA1632.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TGAGGTGACT
AAATGAGGTCATT
 A C G T A C G T A C G T C G A T A T C G G C T A C A T G A C T G G A C T A C T G T C G A A T G C A C G T
C G T A C T G A T C G A G A C T C A T G G C T A A C T G T C A G G C A T G T A C C T G A A G C T G A C T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGAGGTGACT-
GTGGCGTGACNG
 A C G T C G A T A T C G G C T A C A T G A C T G G A C T A C T G T C G A A T G C A C G T A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

SREBF1(var.2)/MA0829.2/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGAGGTGACT-
NNATCAGGTGATNN
 A C G T A C G T A C G T C G A T A T C G G C T A C A T G A C T G G A C T A C T G T C G A A T G C A C G T A C G T
C T G A T C A G T C G A C G A T T A G C C G T A A T C G T A C G C G A T T A C G C G T A A G C T A G T C G A C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TGAGGTGACT
TRAGGTCA--
 C G A T A T C G G C T A C A T G A C T G G A C T A C T G T C G A A T G C A C G T
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGAGGTGACT
CGGTGACGTCAC-
 A C G T A C G T A C G T C G A T A T C G G C T A C A T G A C T G G A C T A C T G T C G A A T G C A C G T
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T