{"text_format":"3","workbook":"xls","n_sheets":1,"sheets":["Sheet1"],"read":"whole","date_system":"1900","formulas":"cached_only"}

{"sheet":"Sheet1","index":0,"n_rows":88,"n_cols":6,"rows_kept":88,"merged":[[1,0,2,0],[1,1,1,5],[17,0,18,0],[17,1,17,5],[39,0,40,0],[39,1,39,5],[63,0,64,0],[63,1,63,5],[77,0,78,0],[77,1,77,5]],"flags":["formulas_cached_only"]}
["Polymorphic HERV-K (HML-2) loci that also detected in this study"]
["loci","Prevelence"]
[null,"CDX1a","CHS1b","CHB1c","East Asian2","This study"]
["4p16c",{"v":0.5867346938775511,"d":"0.59"},{"v":0.5555555555555556,"d":"0.56"},{"v":0.5263157894736842,"d":"0.53"},0.57,0.67]
["6p21.32a",0.45,{"v":0.5684931506849316,"d":"0.57"},{"v":0.463768115942029,"d":"0.46"},0.33,0.67]
["6p21.32b","-","-","-",0.12,0.67]
["19p12d",{"v":0.4010416666666667,"d":"0.40"},{"v":0.3317757009345794,"d":"0.33"},{"v":0.34210526315789475,"d":"0.34"},0.35,0.33]
["19p12b",{"v":0.30434782608695654,"d":"0.30"},{"v":0.20093457943925233,"d":"0.20"},{"v":0.16489361702127658,"d":"0.16"},0.24,0.67]
["19q12",{"v":0.6122448979591837,"d":"0.61"},{"v":0.5934579439252337,"d":"0.59"},{"v":0.634020618556701,"d":"0.63"},0.72,0.67]
["1p13.2",0.65,0.53,0.41,0.58,0.67]
["solo-LTR402",{"v":0.25257731958762886,"d":"0.25"},{"v":0.400990099009901,"d":"0.40"},{"v":0.2765957446808511,"d":"0.28"},0.33,0.67]
["solo-LTR435",{"v":0.7142857142857143,"d":"0.71"},{"v":0.6495327102803738,"d":"0.65"},{"v":0.6354166666666666,"d":"0.64"},0.76,0.67]
["solo-LTR651","-","-","-",0.29,0.67]
["solo-LTR617",{"v":0.6494845360824743,"d":"0.65"},{"v":0.5555555555555556,"d":"0.56"},{"v":0.6302083333333334,"d":"0.63"},{"v":0.6,"d":"0.60"},0.67]
["solo-LTR585",{"v":0.8571428571428571,"d":"0.86"},{"v":0.9166666666666666,"d":"0.92"},{"v":0.8814432989690721,"d":"0.88"},0.82,0.67]
[]
["Polymorphic HERV-K (HML-2) loci that fixed or nearly fixed in Chinese also fixed in this study"]
["loci","Prevelence"]
[null,"CDX1a","CHS1b","CHB1c","East Asian2","This study"]
["solo-LTR156",{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},0.98,{"v":1,"d":"1.00"}]
["6q26",{"v":0.9948979591836735,"d":"0.99"},{"v":0.9814814814814815,"d":"0.98"},{"v":0.979381443298969,"d":"0.98"},0.98,{"v":1,"d":"1.00"}]
["solo-LTR209",{"v":0.9387755102040817,"d":"0.94"},{"v":0.9629629629629629,"d":"0.96"},{"v":0.9329896907216495,"d":"0.93"},0.95,{"v":1,"d":"1.00"}]
["solo-LTR277",{"v":0.9846938775510204,"d":"0.98"},{"v":0.9814814814814815,"d":"0.98"},{"v":0.9845360824742269,"d":"0.98"},0.91,{"v":1,"d":"1.00"}]
["15q22.2",{"v":0.9897959183673469,"d":"0.99"},{"v":0.9814814814814815,"d":"0.98"},{"v":0.9739583333333334,"d":"0.97"},0.86,{"v":1,"d":"1.00"}]
["11q13.4",{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},0.77,{"v":1,"d":"1.00"}]
["solo-LTR251",{"v":0.8406593406593407,"d":"0.84"},{"v":0.8737373737373737,"d":"0.87"},{"v":0.9147727272727273,"d":"0.91"},0.62,{"v":1,"d":"1.00"}]
["1p31.1a",{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},"-",{"v":1,"d":"1.00"}]
["1q22",{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},"-",{"v":1,"d":"1.00"}]
["3q13.2",{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},"-",{"v":1,"d":"1.00"}]
["5p13.3",{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},"-",{"v":1,"d":"1.00"}]
["5q33.3",{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},"-",{"v":1,"d":"1.00"}]
["6q14.1",{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},"-",{"v":1,"d":"1.00"}]
["7p22.1a",{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},"-",{"v":1,"d":"1.00"}]
["solo-LTR498",{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},"-",{"v":1,"d":"1.00"}]
["solo-LTR516",{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},"-",{"v":1,"d":"1.00"}]
["12q14.1",{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},"-",{"v":1,"d":"1.00"}]
["11q22.1",{"v":0.9387755102040817,"d":"0.94"},{"v":0.9675925925925926,"d":"0.97"},{"v":0.9587628865979382,"d":"0.96"},"-",{"v":1,"d":"1.00"}]
[]
["Polymorphic HERV-K (HML-2) with low prevelance in Chinese"]
["loci","Prevelence"]
[null,"CDX1a","CHS1b","CHB1c","East Asian2","This study"]
["11q12.2",{"v":0.0967741935483871,"d":"0.10"},{"v":0.07476635514018691,"d":"0.07"},{"v":0.08947368421052632,"d":"0.09"},0.09,{"v":0,"d":"0.00"}]
["12q12",{"v":0.336734693877551,"d":"0.34"},{"v":0.32242990654205606,"d":"0.32"},{"v":0.2864583333333333,"d":"0.29"},0.36,{"v":0,"d":"0.00"}]
["12q24.31",{"v":0.061224489795918366,"d":"0.06"},{"v":0.04411764705882353,"d":"0.04"},{"v":0.047872340425531915,"d":"0.05"},0.03,{"v":0,"d":"0.00"}]
["13q31.3",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},0.01,{"v":0,"d":"0.00"}]
["19p12e",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"}]
["19q13.43",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"}]
["1p21.1",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"}]
["1p31.1c",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},"-",{"v":0,"d":"0.00"}]
["1q41",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"}]
["20p12.1",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"}]
["3q11.2",{"v":0,"d":"0.00"},{"v":0.009345794392523364,"d":"0.01"},{"v":0,"d":"0.00"},"-",{"v":0,"d":"0.00"}]
["4p16d",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"}]
["5p15.32",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"}]
["5q12.3",{"v":0.015463917525773196,"d":"0.02"},{"v":0.014150943396226415,"d":"0.01"},{"v":0.015463917525773196,"d":"0.02"},0.02,{"v":0,"d":"0.00"}]
["5q14.1",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"}]
["6p22.3",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},"-",{"v":0,"d":"0.00"}]
["7q36.3",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"}]
["8p23.1e","-","-","-",0.02,{"v":0,"d":"0.00"}]
["8q24.3c",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},"-",{"v":0,"d":"0.00"}]
["Xq21.33",{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"},{"v":0,"d":"0.00"}]
[]
["Polymorphic HERV-K(HML-2) fixed in this study"]
["loci","Prevelence"]
[null,"CDX1a","CHS1b","CHB1c","East Asian2","This study"]
["solo-LTR859","-","-","-",0.83,{"v":1,"d":"1.00"}]
["solo-LTR369","-","-","-",0.65,{"v":1,"d":"1.00"}]
["solo-LTR874","-","-","-",{"v":0.6,"d":"0.60"},{"v":1,"d":"1.00"}]
["solo-LTR193","-","-","-",{"v":0.5,"d":"0.50"},{"v":1,"d":"1.00"}]
["solo-LTR823","-","-","-",0.34,{"v":1,"d":"1.00"}]
["solo-LTR436","-","-","-",0.33,{"v":1,"d":"1.00"}]
["solo-LTR540","-","-","-",0.17,{"v":1,"d":"1.00"}]
["19p13.3","-","-","-",0.15,{"v":1,"d":"1.00"}]
["solo-LTR734","-","-","-",0.11,{"v":1,"d":"1.00"}]
["solo-LTR331","-","-","-",0.08,{"v":1,"d":"1.00"}]
[]
["Polymorphic HERV-K (HML-2) with only few reads mapped that don't indicate as polymorphic"]
["loci","Prevelence"]
[null,"CDX1a","CHS1b","CHB1c","East Asian2","This study"]
["8p23.1a *",0.25,{"v":0.373134328358209,"d":"0.37"},{"v":0.4180327868852459,"d":"0.42"},0.04,"-"]
["3q21.2 *",{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},{"v":1,"d":"1.00"},0.54,"-"]
[]
["a. CDX: Chinese Dai in Xishuangbanna, China"]
["b. CHS: Southern Han Chinese, China"]
["c. CHB: Han Chinese in Bejing, China"]
["1. Wildschutte JH, Williams ZH, Montesion M, Subramanian RP, Kidd JM, Coffin JM. 2016. Discovery of unfixed endogenous retrovirus insertions in diverse human populations. Proc Natl Acad Sci U S A 113: E2326."]
["2. Wallace AD, Wendt GA, Barcellos LF, de Smith AJ, Walsh KM, Metayer C, Costello JF, Wiemels JL, Francis SS. 2018. To ERV Is Human: A Phenotype-Wide Scan Linking Polymorphic Human Endogenous Retrovirus-K Insertions to Complex Phenotypes. Frontiers in genetics 9: 298-298."]
["* These two loci don't annotate as polymorphic loci in this study because of only few reads mapped, although they seem to be unfixed without the filtration"]