**SEED defined as positions 2-7 of mature miRNA sequence
**MOTIF MATCHES that correspond to the reverse complement of miRNA SEEDS are displayed from 5`-3` relative to lincRNA sequence
| Seed Matches to the miRNA miR-411-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AUGUAAC | Conserved | Human (Homo sapiens) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | TGCTAAAATTTACATGTTGTG | 6mer |
| HUMAN | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACATGCAGGAACA | 6mer | |||
| HUMAN | AACAGGTGAACAAGCTTTTTCTGTATTTACAT | 7mer-A1 | |||
| HUMAN | TTTACAT | 7mer-A1 | |||
| MARMOSET | TGCTAAAATTTACATGTTGTG | 6mer | |||
| MARMOSET | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACATGCAGGAACA | 6mer | |||
| MARMOSET | AACAGGTGAACAAGCTTTTTCTGTATTTACAT | 6mer | |||
| MARMOSET | TTTACAT | 6mer | |||
| DOG | TTTACAT | 7mer-A1 | |||
| PIG | TTTACAT | 7mer-A1 | |||
| Seed Matches to the miRNA miR-501-3p/502-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AUGCACC | Conserved | Human (Homo sapiens) | HUMAN | GAGCCACTGGGTGTACCAGTGCATT | 6mer |
| HUMAN | AGTGCATTGTTT | 6mer | |||
| HUMAN | AGTGCATT | 6mer | |||
| MARMOSET | GAGCCACTGGGTGTACCAGTGCATT | 6mer | |||
| MARMOSET | AGTGCATTGTTT | 6mer | |||
| MARMOSET | AGTGCATT | 6mer | |||
| DOG | AGTGCATT | 6mer | |||
| PIG | AGTGCATT | 6mer | |||
| COW | AGTGCATT | 6mer | |||
| MOUSE | AGTGCATT | 6mer | |||
| Seed Matches to the miRNA miR-875-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AUACCUC | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) | HUMAN | CAAGATGTTAAGGTATGCTTCAAAAA | 6mer |
| HUMAN | CAAGATGTTAAGGTATGCTTCAAAA | 6mer | |||
| HUMAN | AAGGTATGCTTCAAAA | 6mer | |||
| HUMAN | AAGGTATGCTT | 6mer | |||
| HUMAN | TTTCGTTTGCCTCAGACAGGTATCTCTTC | 6mer | |||
| MARMOSET | CAAGATGTTAAGGTATGCTTCAAAAA | 6mer | |||
| MARMOSET | CAAGATGTTAAGGTATGCTTCAAAA | 6mer | |||
| MARMOSET | AAGGTATGCTTCAAAA | 6mer | |||
| MARMOSET | AAGGTATGCTT | 6mer | |||
| MARMOSET | TTTCGTTTGCCTCAGACAGGTATCTCTTC | 6mer | |||
| DOG | CAAGATGTTAAGGTATGCTTCAAAA | 6mer | |||
| DOG | AAGGTATGCTTCAAAA | 6mer | |||
| DOG | AAGGTATGCTT | 6mer | |||
| PIG | AAGGTATGCTTCAAAA | 6mer | |||
| PIG | AAGGTATGCTT | 6mer | |||
| COW | AAGGTATGCTTCAAAA | 6mer | |||
| COW | AAGGTATGCTT | 6mer | |||
| MOUSE | AAGGTATGCTT | 6mer | |||
| Seed Matches to the miRNA miR-323-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| ACAUUAC | Conserved | Human (Homo sapiens) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | GTAACGGAAGTAATTCAAGATCAAGAGTAATTACCAACTTAATGTTT | 6mer |
| HUMAN | AATAATGTGACTTCTTAAAAG | 6mer | |||
| HUMAN | TAATGTGA | 6mer | |||
| MARMOSET | GTAACGGAAGTAATTCAAGATCAAGAGTAATTACCAACTTAATGTTT | 6mer | |||
| MARMOSET | AATAATGTGACTTCTTAAAAG | 6mer | |||
| MARMOSET | TAATGTGA | 6mer | |||
| DOG | TAATGTGA | 7mer-m8 | |||
| Seed Matches to the miRNA miR-382-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AAGUUGU | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | GTAACGGAAGTAATTCAAGATCAAGAGTAATTACCAACTTAATGTTT | 7mer-A1 |
| HUMAN | TACCAACTTAA | 7mer-A1 | |||
| HUMAN | ACCAACTTA | 7mer-A1 | |||
| HUMAN | TCAACTTCCAAG | 6mer | |||
| HUMAN | TTTTCCCTAGCTTTTCCAGAAGCCTGTTAAAAGCAAGGTCTCCCCACAAGCAACTTCTCTGCCACATCGCCACCC | 6mer | |||
| HUMAN | CCAGTGACTAAAACCAACTTAAACCAGTAAGTGGAGAAATAACATGTT | 7mer-A1 | |||
| MARMOSET | GTAACGGAAGTAATTCAAGATCAAGAGTAATTACCAACTTAATGTTT | 7mer-A1 | |||
| MARMOSET | TACCAACTTAA | 7mer-A1 | |||
| MARMOSET | ACCAACTTA | 7mer-A1 | |||
| MARMOSET | TCAACTTCCAAG | 6mer | |||
| MARMOSET | TTTTCCCTAGCTTTTCCAGAAGCCTGTTAAAAGCAAGGTCTCCCCACAAGCAACTTCTCTGCCACATCGCCACCC | 6mer | |||
| MARMOSET | CCAGTGACTAAAACCAACTTAAACCAGTAAGTGGAGAAATAACATGTT | 7mer-A1 | |||
| DOG | TACCAACTTAA | 7mer-A1 | |||
| DOG | ACCAACTTA | 7mer-A1 | |||
| DOG | TCAACTTCCAAG | 6mer | |||
| PIG | ACCAACTTA | 7mer-A1 | |||
| COW | ACCAACTTA | 7mer-A1 | |||
| Seed Matches to the miRNA miR-218-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UGUGCUU | Broadly Conserved | Human (Homo sapiens) Chicken (Gallus gallus) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | TGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTC | 6mer |
| HUMAN | GTACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| HUMAN | TACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| HUMAN | CTAGCACAGACCCTTCACCCCTCACCTCGATGCAGCC | 6mer | |||
| MARMOSET | TGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTC | 6mer | |||
| MARMOSET | GTACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| MARMOSET | TACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| MARMOSET | CTAGCACAGACCCTTCACCCCTCACCTCGATGCAGCC | 6mer | |||
| DOG | GTACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| DOG | TACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| PIG | TACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| Seed Matches to the miRNA miR-505-3p.2 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UCAACAC | Conserved | Human (Homo sapiens) Mouse (Mus musculus) | HUMAN | TGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTC | 7mer-A1 |
| HUMAN | ATGTTGAAGTTAAGTTTTC | 7mer-A1 | |||
| HUMAN | TAACTGATTAAGAATTGTGATAGTTCAGCTTGAATGTCTCTTAGAGGGTGGGCTTTTGTTGATGAGGGAGGGGAAACTTTTTTTTT | 6mer | |||
| HUMAN | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 7mer-A1 | |||
| HUMAN | CCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAA | 7mer-A1 | |||
| HUMAN | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAGTTTTAAGCAGTCGT | 7mer-m8 | |||
| HUMAN | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 7mer-m8 | |||
| HUMAN | AAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 7mer-m8 | |||
| HUMAN | AGGCTGAGTGTTGAGGAAAT | 7mer-m8 | |||
| MARMOSET | TGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTC | 7mer-A1 | |||
| MARMOSET | ATGTTGAAGTTAAGTTTTC | 7mer-A1 | |||
| MARMOSET | TAACTGATTAAGAATTGTGATAGTTCAGCTTGAATGTCTCTTAGAGGGTGGGCTTTTGTTGATGAGGGAGGGGAAACTTTTTTTTT | 6mer | |||
| MARMOSET | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 7mer-A1 | |||
| MARMOSET | CCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAA | 7mer-A1 | |||
| MARMOSET | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAGTTTTAAGCAGTCGT | 7mer-m8 | |||
| MARMOSET | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 7mer-m8 | |||
| MARMOSET | AAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 7mer-m8 | |||
| MARMOSET | AGGCTGAGTGTTGAGGAAAT | 7mer-m8 | |||
| DOG | ATGTTGAAGTTAAGTTTTC | 7mer-A1 | |||
| DOG | CCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAA | 7mer-A1 | |||
| DOG | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 7mer-m8 | |||
| DOG | AAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 7mer-m8 | |||
| DOG | AGGCTGAGTGTTGAGGAAAT | 7mer-m8 | |||
| PIG | CCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAA | 7mer-A1 | |||
| PIG | AAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 7mer-m8 | |||
| PIG | AGGCTGAGTGTTGAGGAAAT | 7mer-m8 | |||
| COW | AAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 7mer-m8 | |||
| COW | AGGCTGAGTGTTGAGGAAAT | 7mer-m8 | |||
| MOUSE | AGGCTGAGTGTTGAGGAAAT | 7mer-m8 | |||
| Seed Matches to the miRNA miR-421 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UCAACAG | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Chimp (Pan troglodytes) Dog (Canis lupus familiaris) Cow (Bos taurus) | HUMAN | TGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTC | 7mer-A1 |
| HUMAN | ATGTTGAAGTTAAGTTTTC | 7mer-A1 | |||
| HUMAN | TAACTGATTAAGAATTGTGATAGTTCAGCTTGAATGTCTCTTAGAGGGTGGGCTTTTGTTGATGAGGGAGGGGAAACTTTTTTTTT | 6mer | |||
| HUMAN | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 7mer-A1 | |||
| HUMAN | CCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAA | 7mer-A1 | |||
| HUMAN | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAGTTTTAAGCAGTCGT | 6mer | |||
| HUMAN | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 6mer | |||
| HUMAN | AAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 6mer | |||
| HUMAN | AGGCTGAGTGTTGAGGAAAT | 6mer | |||
| MARMOSET | TGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTC | 7mer-A1 | |||
| MARMOSET | ATGTTGAAGTTAAGTTTTC | 7mer-A1 | |||
| MARMOSET | TAACTGATTAAGAATTGTGATAGTTCAGCTTGAATGTCTCTTAGAGGGTGGGCTTTTGTTGATGAGGGAGGGGAAACTTTTTTTTT | 6mer | |||
| MARMOSET | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 7mer-A1 | |||
| MARMOSET | CCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAA | 7mer-A1 | |||
| MARMOSET | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAGTTTTAAGCAGTCGT | 6mer | |||
| MARMOSET | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 6mer | |||
| MARMOSET | AAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 6mer | |||
| MARMOSET | AGGCTGAGTGTTGAGGAAAT | 6mer | |||
| DOG | ATGTTGAAGTTAAGTTTTC | 7mer-A1 | |||
| DOG | CCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAA | 7mer-A1 | |||
| DOG | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 6mer | |||
| DOG | AAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 6mer | |||
| DOG | AGGCTGAGTGTTGAGGAAAT | 6mer | |||
| PIG | CCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAA | 7mer-A1 | |||
| PIG | AAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 6mer | |||
| PIG | AGGCTGAGTGTTGAGGAAAT | 6mer | |||
| COW | AAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 6mer | |||
| COW | AGGCTGAGTGTTGAGGAAAT | 6mer | |||
| MOUSE | AGGCTGAGTGTTGAGGAAAT | 6mer | |||
| Seed Matches to the miRNA miR-212-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CCUUGGC | Broadly Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | TGCCAAGGC | 7mer-m8 |
| MARMOSET | TGCCAAGGC | 7mer-m8 | |||
| Seed Matches to the miRNA miR-140-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AGUGGUU | Broadly Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | AAACCAAACATTCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCA | 8mer |
| HUMAN | TCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCA | 8mer | |||
| HUMAN | TTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTA | 8mer | |||
| MARMOSET | AAACCAAACATTCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCA | 8mer | |||
| MARMOSET | TCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCA | 8mer | |||
| MARMOSET | TTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTA | 8mer | |||
| DOG | TCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCA | 8mer | |||
| DOG | TTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTA | 8mer | |||
| PIG | TTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTA | 8mer | |||
| COW | TTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTA | 8mer | |||
| Seed Matches to the miRNA miR-425-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AUGACAC | Broadly Conserved | Human (Homo sapiens) X. tropicalis (Xenopus tropicalis) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | TGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGA | 7mer-A1 |
| MARMOSET | TGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGA | 7mer-A1 | |||
| Seed Matches to the miRNA miR-499a-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UAAGACU | Broadly Conserved | Human (Homo sapiens) | HUMAN | ATTTTGGGATGGTCTTAACAGGGAAGAGAGAGGGTGGGGGAGAAAATGTTTTTTTCTAAGATTTTCCACAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTAC | 7mer-A1 |
| HUMAN | TGGTCTTAACAGGGAAGAG | 7mer-A1 | |||
| HUMAN | GTCTTAG | 7mer-m8 | |||
| HUMAN | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACATGCAGGAACA | 7mer-A1 | |||
| HUMAN | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACA | 7mer-A1 | |||
| MARMOSET | ATTTTGGGATGGTCTTAACAGGGAAGAGAGAGGGTGGGGGAGAAAATGTTTTTTTCTAAGATTTTCCACAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTAC | 7mer-A1 | |||
| MARMOSET | TGGTCTTAACAGGGAAGAG | 7mer-A1 | |||
| MARMOSET | GTCTTAG | 7mer-m8 | |||
| MARMOSET | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACATGCAGGAACA | 7mer-A1 | |||
| MARMOSET | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACA | 7mer-A1 | |||
| DOG | TGGTCTTAACAGGGAAGAG | 7mer-A1 | |||
| DOG | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACA | 7mer-A1 | |||
| PIG | TGGTCTTAACAGGGAAGAG | 7mer-A1 | |||
| Seed Matches to the miRNA miR-22-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AGCUGCC | Broadly Conserved | Human (Homo sapiens) X. tropicalis (Xenopus tropicalis) Chicken (Gallus gallus) Cow (Bos taurus) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | TGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTC | 6mer |
| HUMAN | GTACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| HUMAN | TACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| HUMAN | CAGTGCAGCTTTGGTTCATA | 6mer | |||
| HUMAN | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAACTTGCATCTGCA | 7mer-m8 | |||
| HUMAN | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAA | 7mer-m8 | |||
| HUMAN | TCATCTGGGAGCAGAAAACAGCAGGCAGCTGTT | 7mer-m8 | |||
| HUMAN | AGCTGTTTTTATAGCAGCTCTTAA | 6mer | |||
| HUMAN | TTTTATAGCAGCT | 6mer | |||
| MARMOSET | TGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTC | 6mer | |||
| MARMOSET | GTACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| MARMOSET | TACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| MARMOSET | CAGTGCAGCTTTGGTTCATA | 6mer | |||
| MARMOSET | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAACTTGCATCTGCA | 7mer-m8 | |||
| MARMOSET | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAA | 7mer-m8 | |||
| MARMOSET | TCATCTGGGAGCAGAAAACAGCAGGCAGCTGTT | 7mer-m8 | |||
| MARMOSET | AGCTGTTTTTATAGCAGCTCTTAA | 6mer | |||
| MARMOSET | TTTTATAGCAGCT | 6mer | |||
| DOG | GTACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| DOG | TACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| DOG | CAGTGCAGCTTTGGTTCATA | 6mer | |||
| DOG | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAA | 7mer-m8 | |||
| DOG | TCATCTGGGAGCAGAAAACAGCAGGCAGCTGTT | 7mer-m8 | |||
| DOG | TTTTATAGCAGCT | 7mer-A1 | |||
| PIG | TACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| PIG | CAGTGCAGCTTTGGTTCATA | 6mer | |||
| PIG | TCATCTGGGAGCAGAAAACAGCAGGCAGCTGTT | 7mer-m8 | |||
| COW | CAGTGCAGCTTTGGTTCATA | 6mer | |||
| COW | TCATCTGGGAGCAGAAAACAGCAGGCAGCTGTT | 7mer-m8 | |||
| Seed Matches to the miRNA miR-129-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UUUUUGC | Broadly Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Cow (Bos taurus) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | GACAAGCTAGGAAACAAAAA | 6mer |
| HUMAN | CATCAAAAAGCT | 6mer | |||
| HUMAN | CAAAAAG | 6mer | |||
| HUMAN | CAAGATGTTAAGGTATGCTTCAAAAA | 6mer | |||
| HUMAN | TTATCTGCATATGCCAAAAAA | 7mer-A1 | |||
| HUMAN | ACAAAAATAATGAATTGATGAGAAATACAATGAAGA | 6mer | |||
| HUMAN | TGGGTGGGAATGCAAAAATTCTCTGCTAAGACTTTTTCAGGTGAACATAACAGACTTGGCCAAGCTAGCATCTTAGCGGAAGC | 7mer-m8 | |||
| HUMAN | TGCAAAAATTCTCTGCTAAGACTTTTTCAGGTGAACATAA | 7mer-m8 | |||
| HUMAN | TGCAAAAA | 7mer-m8 | |||
| MARMOSET | GACAAGCTAGGAAACAAAAA | 7mer-A1 | |||
| MARMOSET | CATCAAAAAGCT | 6mer | |||
| MARMOSET | CAAAAAG | 6mer | |||
| MARMOSET | CAAGATGTTAAGGTATGCTTCAAAAA | 6mer | |||
| MARMOSET | TTATCTGCATATGCCAAAAAA | 7mer-A1 | |||
| MARMOSET | ACAAAAATAATGAATTGATGAGAAATACAATGAAGA | 6mer | |||
| MARMOSET | TGGGTGGGAATGCAAAAATTCTCTGCTAAGACTTTTTCAGGTGAACATAACAGACTTGGCCAAGCTAGCATCTTAGCGGAAGC | 7mer-m8 | |||
| MARMOSET | TGCAAAAATTCTCTGCTAAGACTTTTTCAGGTGAACATAA | 7mer-m8 | |||
| MARMOSET | TGCAAAAA | 7mer-m8 | |||
| DOG | CAAAAAG | 6mer | |||
| DOG | TGCAAAAATTCTCTGCTAAGACTTTTTCAGGTGAACATAA | 7mer-m8 | |||
| DOG | TGCAAAAA | 7mer-m8 | |||
| PIG | TGCAAAAA | 7mer-m8 | |||
| COW | TGCAAAAA | 7mer-m8 | |||
| MOUSE | TGCAAAAA | 7mer-m8 | |||
| Seed Matches to the miRNA miR-410-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AUAUAAC | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) | HUMAN | GGGATTTATATGGGGA | 6mer |
| HUMAN | TGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGA | 6mer | |||
| MARMOSET | GGGATTTATATGGGGA | 6mer | |||
| MARMOSET | TGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGA | 6mer | |||
| Seed Matches to the miRNA miR-382-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AUCAUUC | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTCTGATGGTAGCTTTTGTATTATCAAGTAAGATTCT | 6mer |
| HUMAN | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| HUMAN | GTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| MARMOSET | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTCTGATGGTAGCTTTTGTATTATCAAGTAAGATTCT | 6mer | |||
| MARMOSET | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| MARMOSET | GTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| DOG | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| DOG | GTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| PIG | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| PIG | GTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| COW | GTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| Seed Matches to the miRNA miR-338-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CCAGCAU | Broadly Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | AGTATTGAATAGATTTCAGCTTTATGCTGGAGTAA | 8mer |
| HUMAN | CAGCTTTATGCTGGA | 8mer | |||
| HUMAN | AAAAAAAAAGCAAAAGATGCTGGT | 7mer-m8 | |||
| MARMOSET | AGTATTGAATAGATTTCAGCTTTATGCTGGAGTAA | 8mer | |||
| MARMOSET | CAGCTTTATGCTGGA | 8mer | |||
| MARMOSET | AAAAAAAAAGCAAAAGATGCTGGT | 7mer-m8 | |||
| DOG | CAGCTTTATGCTGGA | 8mer | |||
| DOG | AAAAAAAAAGCAAAAGATGCTGGT | 7mer-m8 | |||
| PIG | CAGCTTTATGCTGGA | 8mer | |||
| PIG | AAAAAAAAAGCAAAAGATGCTGGT | 7mer-m8 | |||
| COW | AAAAAAAAAGCAAAAGATGCTGGT | 7mer-m8 | |||
| Seed Matches to the miRNA miR-138-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GCUGGUG | Broadly Conserved | Human (Homo sapiens) Chicken (Gallus gallus) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | TAGAGGATCCTAGACCAGCATGCCAGT | 7mer-A1 |
| HUMAN | TAGACTTTTTTCAGATAACATCTTCTGAGTCATAACCAGCCTGGCAGT | 6mer | |||
| HUMAN | CTTCTGAGTCATAACCAGCCTGGCA | 6mer | |||
| MARMOSET | TAGAGGATCCTAGACCAGCATGCCAGT | 7mer-A1 | |||
| MARMOSET | TAGACTTTTTTCAGATAACATCTTCTGAGTCATAACCAGCCTGGCAGT | 6mer | |||
| MARMOSET | CTTCTGAGTCATAACCAGCCTGGCA | 6mer | |||
| DOG | CTTCTGAGTCATAACCAGCCTGGCA | 6mer | |||
| Seed Matches to the miRNA miR-378-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CUGGACU | Conserved | Human (Homo sapiens) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | GAGTCCAGGA | 7mer-m8 |
| MARMOSET | GAGTCCAGGA | 7mer-m8 | |||
| Seed Matches to the miRNA miR-125-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CCCUGAG | Broadly Conserved | Human (Homo sapiens) Chicken (Gallus gallus) Opossum (Monodelphis domestica) | HUMAN | GCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTAT | 7mer-A1 |
| HUMAN | TGCTGTTGGCACGAACACCTTCAGGGA | 7mer-A1 | |||
| HUMAN | AACACCTTCAGGGA | 7mer-A1 | |||
| HUMAN | ACACCTTCAGGGA | 7mer-A1 | |||
| MARMOSET | GCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTAT | 7mer-A1 | |||
| MARMOSET | TGCTGTTGGCACGAACACCTTCAGGGA | 7mer-A1 | |||
| MARMOSET | AACACCTTCAGGGA | 7mer-A1 | |||
| MARMOSET | ACACCTTCAGGGA | 7mer-A1 | |||
| DOG | TGCTGTTGGCACGAACACCTTCAGGGA | 7mer-A1 | |||
| DOG | AACACCTTCAGGGA | 7mer-A1 | |||
| DOG | ACACCTTCAGGGA | 7mer-A1 | |||
| PIG | AACACCTTCAGGGA | 7mer-A1 | |||
| PIG | ACACCTTCAGGGA | 7mer-A1 | |||
| COW | AACACCTTCAGGGA | 7mer-A1 | |||
| COW | ACACCTTCAGGGA | 7mer-A1 | |||
| MOUSE | ACACCTTCAGGGA | 7mer-A1 | |||
| Seed Matches to the miRNA miR-433-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UCAUGAU | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | CTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAG | 7mer-A1 |
| HUMAN | TTTTAAAGAATTTTCCTTTGCAGAGGCATTTCATCCTTCATGAAGC | 7mer-A1 | |||
| HUMAN | CATTTCATCCTTCATGAAGC | 7mer-A1 | |||
| HUMAN | TTTCATCCTTCATGA | 7mer-A1 | |||
| HUMAN | GATCTCCAATGCTCTTCAGTAGGGTCATGAAGGTTTTTCTTTTCCTGAGAAAACAACA | 7mer-A1 | |||
| MARMOSET | CTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAG | 7mer-A1 | |||
| MARMOSET | TTTTAAAGAATTTTCCTTTGCAGAGGCATTTCATCCTTCATGAAGC | 7mer-A1 | |||
| MARMOSET | CATTTCATCCTTCATGAAGC | 7mer-A1 | |||
| MARMOSET | TTTCATCCTTCATGA | 7mer-A1 | |||
| MARMOSET | GATCTCCAATGCTCTTCAGTAGGGTCATGAAGGTTTTTCTTTTCCTGAGAAAACAACA | 7mer-A1 | |||
| DOG | CATTTCATCCTTCATGAAGC | 7mer-A1 | |||
| DOG | TTTCATCCTTCATGA | 7mer-A1 | |||
| PIG | TTTCATCCTTCATGA | 6mer | |||
| Seed Matches to the miRNA miR-665 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CCAGGAG | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Chimp (Pan troglodytes) Dog (Canis lupus familiaris) Rat (Rattus norvegicus) | HUMAN | CTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAG | 7mer-A1 |
| HUMAN | ACTACATTAATCCTGGAATAAAAGAAGCCGAAATA | 7mer-A1 | |||
| HUMAN | ACATTAATCCTGGAATAAAAGAAGC | 7mer-A1 | |||
| HUMAN | AGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGCATACTCAAAATTTTTTTCCTGGAATTTGGAGGGATGGGAGGAGGGGGTGGGGCTTACTTGTT | 7mer-A1 | |||
| HUMAN | ACTCCTGGTTTCCAGGACGGGGTTCAAATCCCTGCGGC | 7mer-m8 | |||
| HUMAN | ACTCCTGG | 7mer-m8 | |||
| MARMOSET | CTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAG | 7mer-A1 | |||
| MARMOSET | ACTACATTAATCCTGGAATAAAAGAAGCCGAAATA | 7mer-A1 | |||
| MARMOSET | ACATTAATCCTGGAATAAAAGAAGC | 7mer-A1 | |||
| MARMOSET | AGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGCATACTCAAAATTTTTTTCCTGGAATTTGGAGGGATGGGAGGAGGGGGTGGGGCTTACTTGTT | 7mer-A1 | |||
| MARMOSET | ACTCCTGGTTTCCAGGACGGGGTTCAAATCCCTGCGGC | 7mer-m8 | |||
| MARMOSET | ACTCCTGG | 7mer-m8 | |||
| DOG | ACATTAATCCTGGAATAAAAGAAGC | 7mer-A1 | |||
| DOG | ACTCCTGG | 8mer | |||
| PIG | ACTCCTGG | 7mer-m8 | |||
| COW | ACTCCTGG | 7mer-m8 | |||
| MOUSE | ACTCCTGG | 7mer-m8 | |||
| TURTLE | ACTCCTGG | 7mer-m8 | |||
| ALLIGATOR | ACTCCTGG | 7mer-m8 | |||
| LIZARD | ACTCCTGG | 7mer-m8 | |||
| SNAKE | ACTCCTGG | 8mer | |||
| X.TROPICALIS | ACTCCTGG | 7mer-m8 | |||
| SHARK | ACTCCTGG | 7mer-m8 | |||
| OPOSSUM | ACTCCTGG | 7mer-m8 | |||
| SPOTTEDGAR | ACTCCTGG | 7mer-m8 | |||
| Seed Matches to the miRNA miR-216a-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AAUCUCA | Broadly Conserved | Human (Homo sapiens) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | TTTAAAAAGAGATTAA | 7mer-A1 |
| HUMAN | TGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGA | 7mer-m8 | |||
| HUMAN | TAACCTCTTAGACAGGTGGGAGATTATGATCAGAGTAAAAGGTAATTACACATTTTATTTCCAGAAAGTCAGG | 7mer-A1 | |||
| HUMAN | ACCTCTTAGACAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| HUMAN | CAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| MARMOSET | TTTAAAAAGAGATTAA | 7mer-A1 | |||
| MARMOSET | TGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGA | 7mer-m8 | |||
| MARMOSET | TAACCTCTTAGACAGGTGGGAGATTATGATCAGAGTAAAAGGTAATTACACATTTTATTTCCAGAAAGTCAGG | 7mer-A1 | |||
| MARMOSET | ACCTCTTAGACAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| MARMOSET | CAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| DOG | ACCTCTTAGACAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| DOG | CAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| PIG | CAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| COW | CAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| Seed Matches to the miRNA miR-488-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UGAAAGG | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | TCTAATCTTTCAGAAACTTTGTCTGCGAACAC | 6mer |
| HUMAN | TCTAATCTTTCAGAAACTTTGTCTGCGA | 6mer | |||
| HUMAN | ATCTTTCAGA | 6mer | |||
| HUMAN | AAACCAAACATTCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCA | 6mer | |||
| HUMAN | TCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCA | 6mer | |||
| HUMAN | TTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTA | 6mer | |||
| HUMAN | CTAGTTCTTTCAGATG | 6mer | |||
| MARMOSET | TCTAATCTTTCAGAAACTTTGTCTGCGAACAC | 6mer | |||
| MARMOSET | TCTAATCTTTCAGAAACTTTGTCTGCGA | 6mer | |||
| MARMOSET | ATCTTTCAGA | 6mer | |||
| MARMOSET | AAACCAAACATTCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCA | 6mer | |||
| MARMOSET | TCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCA | 6mer | |||
| MARMOSET | TTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTA | 6mer | |||
| MARMOSET | CTAGTTCTTTCAGATG | 6mer | |||
| DOG | TCTAATCTTTCAGAAACTTTGTCTGCGA | 6mer | |||
| DOG | ATCTTTCAGA | 6mer | |||
| DOG | TCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCA | 6mer | |||
| DOG | TTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTA | 6mer | |||
| DOG | CTAGTTCTTTCAGATG | 6mer | |||
| PIG | ATCTTTCAGA | 6mer | |||
| PIG | TTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTA | 6mer | |||
| PIG | CTAGTTCTTTCAGATG | 6mer | |||
| COW | ATCTTTCAGA | 6mer | |||
| COW | TTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTA | 6mer | |||
| COW | CTAGTTCTTTCAGATG | 6mer | |||
| MOUSE | CTAGTTCTTTCAGATG | 6mer | |||
| Seed Matches to the miRNA miR-296-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AGGGUUG | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Cow (Bos taurus) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | TGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGA | 6mer |
| HUMAN | AAGCATAACCCTGAGAT | 6mer | |||
| MARMOSET | TGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGA | 6mer | |||
| MARMOSET | AAGCATAACCCTGAGAT | 6mer | |||
| DOG | AAGCATAACCCTGAGAT | 6mer | |||
| Seed Matches to the miRNA miR-374-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UAUAAUA | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Rat (Rattus norvegicus) | HUMAN | TGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGA | 6mer |
| MARMOSET | TGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGA | 6mer | |||
| Seed Matches to the miRNA miR-204-5p/211-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UCCCUUU | Broadly Conserved | Human (Homo sapiens) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTCTGATGGTAGCTTTTGTATTATCAAGTAAGATTCT | 6mer |
| HUMAN | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| HUMAN | GTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| MARMOSET | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTCTGATGGTAGCTTTTGTATTATCAAGTAAGATTCT | 6mer | |||
| MARMOSET | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| MARMOSET | GTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| DOG | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| DOG | GTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| PIG | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| PIG | GTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| COW | GTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| Seed Matches to the miRNA miR-493-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GAAGGUC | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | GCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTAT | 7mer-A1 |
| HUMAN | TGCTGTTGGCACGAACACCTTCAGGGA | 7mer-A1 | |||
| HUMAN | AACACCTTCAGGGA | 7mer-A1 | |||
| HUMAN | ACACCTTCAGGGA | 7mer-A1 | |||
| MARMOSET | GCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTAT | 7mer-A1 | |||
| MARMOSET | TGCTGTTGGCACGAACACCTTCAGGGA | 7mer-A1 | |||
| MARMOSET | AACACCTTCAGGGA | 7mer-A1 | |||
| MARMOSET | ACACCTTCAGGGA | 7mer-A1 | |||
| DOG | TGCTGTTGGCACGAACACCTTCAGGGA | 7mer-A1 | |||
| DOG | AACACCTTCAGGGA | 7mer-A1 | |||
| DOG | ACACCTTCAGGGA | 7mer-A1 | |||
| PIG | AACACCTTCAGGGA | 7mer-A1 | |||
| PIG | ACACCTTCAGGGA | 7mer-A1 | |||
| COW | AACACCTTCAGGGA | 7mer-A1 | |||
| COW | ACACCTTCAGGGA | 7mer-A1 | |||
| MOUSE | ACACCTTCAGGGA | 7mer-A1 | |||
| Seed Matches to the miRNA miR-371-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CUCAAAC | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) | HUMAN | CTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAG | 6mer |
| HUMAN | ATCTTGTCTGAAGCTTTTGAGGGCAGACT | 6mer | |||
| HUMAN | AGCTTTTGAGGGCAGACT | 6mer | |||
| HUMAN | AGCTTTTGAGGGC | 6mer | |||
| HUMAN | AGATCAGGATTTGAGCGGAAGAACGAATGTAACTTT | 6mer | |||
| MARMOSET | CTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAG | 6mer | |||
| MARMOSET | ATCTTGTCTGAAGCTTTTGAGGGCAGACT | 6mer | |||
| MARMOSET | AGCTTTTGAGGGCAGACT | 6mer | |||
| MARMOSET | AGCTTTTGAGGGC | 6mer | |||
| MARMOSET | AGATCAGGATTTGAGCGGAAGAACGAATGTAACTTT | 6mer | |||
| DOG | ATCTTGTCTGAAGCTTTTGAGGGCAGACT | 6mer | |||
| DOG | AGCTTTTGAGGGCAGACT | 6mer | |||
| DOG | AGCTTTTGAGGGC | 6mer | |||
| PIG | ATCTTGTCTGAAGCTTTTGAGGGCAGACT | 6mer | |||
| PIG | AGCTTTTGAGGGCAGACT | 6mer | |||
| PIG | AGCTTTTGAGGGC | 6mer | |||
| COW | AGCTTTTGAGGGCAGACT | 6mer | |||
| COW | AGCTTTTGAGGGC | 6mer | |||
| MOUSE | AGCTTTTGAGGGC | 6mer | |||
| Seed Matches to the miRNA miR-1306-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CACCUCC | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | TAATGGGGGAGTTTCGTACTGAGGTGTAAA | 6mer |
| HUMAN | CTGTGTTGGCGTGGGGGTGGAGGGGTGAGGTGGGCGCTAAGCCTTTT | 6mer | |||
| MARMOSET | TAATGGGGGAGTTTCGTACTGAGGTGTAAA | 6mer | |||
| MARMOSET | CTGTGTTGGCGTGGGGGTGGAGGGGTGAGGTGGGCGCTAAGCCTTTT | 6mer | |||
| Seed Matches to the miRNA miR-543 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AACAUUC | Conserved | Human (Homo sapiens) Chimp (Pan troglodytes) Dog (Canis lupus familiaris) Cow (Bos taurus) | HUMAN | GTAACGGAAGTAATTCAAGATCAAGAGTAATTACCAACTTAATGTTT | 6mer |
| HUMAN | ATTTTGGGATGGTCTTAACAGGGAAGAGAGAGGGTGGGGGAGAAAATGTTTTTTTCTAAGATTTTCCACAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTAC | 6mer | |||
| HUMAN | TGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTC | 6mer | |||
| HUMAN | TAGGCAATGTTTTACACTATTG | 6mer | |||
| HUMAN | AACTGGCAAGTGGAAATGTTTAA | 6mer | |||
| MARMOSET | GTAACGGAAGTAATTCAAGATCAAGAGTAATTACCAACTTAATGTTT | 6mer | |||
| MARMOSET | ATTTTGGGATGGTCTTAACAGGGAAGAGAGAGGGTGGGGGAGAAAATGTTTTTTTCTAAGATTTTCCACAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTAC | 6mer | |||
| MARMOSET | TGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTC | 6mer | |||
| MARMOSET | TAGGCAATGTTTTACACTATTG | 6mer | |||
| MARMOSET | AACTGGCAAGTGGAAATGTTTAA | 6mer | |||
| Seed Matches to the miRNA miR-873-5p.1 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CAGGAAC | Conserved | Human (Homo sapiens) | HUMAN | AGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGCATACTCAAAATTTTTTTCCTGGAATTTGGAGGGATGGGAGGAGGGGGTGGGGCTTACTTGTT | 6mer |
| HUMAN | TTAAGATTTTTCAGGTACCCCTCACTAAAGGCACCGAAGGCTTAAAGTAGGACAACCATGGAGCCTTCCTGTGGCA | 6mer | |||
| HUMAN | AAGTAGGACAACCATGGAGCCTTCCTGTGGCA | 6mer | |||
| HUMAN | GCCTTCCTGTGGCA | 6mer | |||
| HUMAN | CTTCCTGTGGCA | 6mer | |||
| HUMAN | CTTCCTGTG | 6mer | |||
| HUMAN | GATCTCCAATGCTCTTCAGTAGGGTCATGAAGGTTTTTCTTTTCCTGAGAAAACAACA | 7mer-A1 | |||
| HUMAN | AAGGTTTTTCTTTTCCTGAGAAAACAA | 7mer-A1 | |||
| HUMAN | AAGGTTTTTCTTTTCCTGAGA | 7mer-A1 | |||
| HUMAN | TTTTCTTTTCCTGAGA | 7mer-A1 | |||
| MARMOSET | AGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGCATACTCAAAATTTTTTTCCTGGAATTTGGAGGGATGGGAGGAGGGGGTGGGGCTTACTTGTT | 6mer | |||
| MARMOSET | TTAAGATTTTTCAGGTACCCCTCACTAAAGGCACCGAAGGCTTAAAGTAGGACAACCATGGAGCCTTCCTGTGGCA | 6mer | |||
| MARMOSET | AAGTAGGACAACCATGGAGCCTTCCTGTGGCA | 6mer | |||
| MARMOSET | GCCTTCCTGTGGCA | 6mer | |||
| MARMOSET | CTTCCTGTGGCA | 6mer | |||
| MARMOSET | CTTCCTGTG | 6mer | |||
| MARMOSET | GATCTCCAATGCTCTTCAGTAGGGTCATGAAGGTTTTTCTTTTCCTGAGAAAACAACA | 7mer-A1 | |||
| MARMOSET | AAGGTTTTTCTTTTCCTGAGAAAACAA | 7mer-A1 | |||
| MARMOSET | AAGGTTTTTCTTTTCCTGAGA | 7mer-A1 | |||
| MARMOSET | TTTTCTTTTCCTGAGA | 7mer-A1 | |||
| DOG | AAGTAGGACAACCATGGAGCCTTCCTGTGGCA | 6mer | |||
| DOG | GCCTTCCTGTGGCA | 6mer | |||
| DOG | CTTCCTGTGGCA | 6mer | |||
| DOG | CTTCCTGTG | 6mer | |||
| DOG | AAGGTTTTTCTTTTCCTGAGAAAACAA | 7mer-A1 | |||
| DOG | AAGGTTTTTCTTTTCCTGAGA | 7mer-A1 | |||
| DOG | TTTTCTTTTCCTGAGA | 7mer-A1 | |||
| PIG | GCCTTCCTGTGGCA | 6mer | |||
| PIG | CTTCCTGTGGCA | 6mer | |||
| PIG | CTTCCTGTG | 6mer | |||
| PIG | AAGGTTTTTCTTTTCCTGAGAAAACAA | 7mer-A1 | |||
| PIG | AAGGTTTTTCTTTTCCTGAGA | 7mer-A1 | |||
| PIG | TTTTCTTTTCCTGAGA | 7mer-A1 | |||
| COW | CTTCCTGTGGCA | 6mer | |||
| COW | CTTCCTGTG | 6mer | |||
| COW | AAGGTTTTTCTTTTCCTGAGAAAACAA | 7mer-A1 | |||
| COW | AAGGTTTTTCTTTTCCTGAGA | 7mer-A1 | |||
| COW | TTTTCTTTTCCTGAGA | 7mer-A1 | |||
| MOUSE | CTTCCTGTG | 6mer | |||
| MOUSE | AAGGTTTTTCTTTTCCTGAGAAAACAA | 7mer-A1 | |||
| MOUSE | AAGGTTTTTCTTTTCCTGAGA | 7mer-A1 | |||
| MOUSE | TTTTCTTTTCCTGAGA | 7mer-A1 | |||
| TURTLE | AAGGTTTTTCTTTTCCTGAGA | 7mer-A1 | |||
| TURTLE | TTTTCTTTTCCTGAGA | 7mer-A1 | |||
| ALLIGATOR | TTTTCTTTTCCTGAGA | 7mer-A1 | |||
| LIZARD | TTTTCTTTTCCTGAGA | 7mer-A1 | |||
| SNAKE | TTTTCTTTTCCTGAGA | 7mer-A1 | |||
| Seed Matches to the miRNA miR-140-3p.1 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CCACAGG | Broadly Conserved | Human (Homo sapiens) Mouse (Mus musculus) | HUMAN | AGGTCTGTGGA | 7mer-A1 |
| HUMAN | TCTGTGG | 7mer-A1 | |||
| HUMAN | CTGTGGAGTTCTTAA | 7mer-A1 | |||
| HUMAN | CTGTGGAG | 7mer-A1 | |||
| HUMAN | CTGTGGA | 7mer-A1 | |||
| HUMAN | GCCTGTGGG | 7mer-m8 | |||
| HUMAN | TTAAGATTTTTCAGGTACCCCTCACTAAAGGCACCGAAGGCTTAAAGTAGGACAACCATGGAGCCTTCCTGTGGCA | 7mer-m8 | |||
| HUMAN | AAGTAGGACAACCATGGAGCCTTCCTGTGGCA | 7mer-m8 | |||
| HUMAN | GCCTTCCTGTGGCA | 7mer-m8 | |||
| HUMAN | CTTCCTGTGGCA | 7mer-m8 | |||
| MARMOSET | AGGTCTGTGGA | 7mer-A1 | |||
| MARMOSET | TCTGTGG | 7mer-A1 | |||
| MARMOSET | CTGTGGAGTTCTTAA | 7mer-A1 | |||
| MARMOSET | CTGTGGAG | 7mer-A1 | |||
| MARMOSET | CTGTGGA | 7mer-A1 | |||
| MARMOSET | GCCTGTGGG | 7mer-m8 | |||
| MARMOSET | TTAAGATTTTTCAGGTACCCCTCACTAAAGGCACCGAAGGCTTAAAGTAGGACAACCATGGAGCCTTCCTGTGGCA | 7mer-m8 | |||
| MARMOSET | AAGTAGGACAACCATGGAGCCTTCCTGTGGCA | 7mer-m8 | |||
| MARMOSET | GCCTTCCTGTGGCA | 7mer-m8 | |||
| MARMOSET | CTTCCTGTGGCA | 7mer-m8 | |||
| DOG | TCTGTGG | 6mer | |||
| DOG | CTGTGGAG | 7mer-A1 | |||
| DOG | CTGTGGA | 7mer-A1 | |||
| DOG | AAGTAGGACAACCATGGAGCCTTCCTGTGGCA | 7mer-m8 | |||
| DOG | GCCTTCCTGTGGCA | 7mer-m8 | |||
| DOG | CTTCCTGTGGCA | 7mer-m8 | |||
| PIG | CTGTGGAG | 7mer-A1 | |||
| PIG | CTGTGGA | 7mer-A1 | |||
| PIG | GCCTTCCTGTGGCA | 7mer-m8 | |||
| PIG | CTTCCTGTGGCA | 7mer-m8 | |||
| COW | CTGTGGA | 7mer-A1 | |||
| COW | CTTCCTGTGGCA | 7mer-m8 | |||
| Seed Matches to the miRNA miR-329-3p/362-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| ACACACC | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | GGATATGGTAGTGTGTGGTTCTCTTTTGGAATTTTTTTCAGGTGATTTAATA | 6mer |
| HUMAN | TAGTGTGTGGTTCTCT | 6mer | |||
| HUMAN | GTGTGTGG | 6mer | |||
| HUMAN | TTTTCAGTTGTGTGTAAGCAAGTTTTT | 7mer-A1 | |||
| MARMOSET | GGATATGGTAGTGTGTGGTTCTCTTTTGGAATTTTTTTCAGGTGATTTAATA | 6mer | |||
| MARMOSET | TAGTGTGTGGTTCTCT | 6mer | |||
| MARMOSET | GTGTGTGG | 6mer | |||
| MARMOSET | TTTTCAGTTGTGTGTAAGCAAGTTTTT | 7mer-A1 | |||
| DOG | GGATATGGTAGTGTGTGGTTCTCTTTTGGAATTTTTTTCAGGTGATTTAATA | 6mer | |||
| DOG | TAGTGTGTGGTTCTCT | 6mer | |||
| DOG | GTGTGTGG | 6mer | |||
| PIG | GGATATGGTAGTGTGTGGTTCTCTTTTGGAATTTTTTTCAGGTGATTTAATA | 6mer | |||
| PIG | TAGTGTGTGGTTCTCT | 6mer | |||
| PIG | GTGTGTGG | 6mer | |||
| COW | TAGTGTGTGGTTCTCT | 6mer | |||
| COW | GTGTGTGG | 6mer | |||
| MOUSE | TAGTGTGTGGTTCTCT | 6mer | |||
| MOUSE | GTGTGTGG | 6mer | |||
| TURTLE | GTGTGTGG | 7mer-m8 | |||
| ALLIGATOR | GTGTGTGG | 7mer-m8 | |||
| Seed Matches to the miRNA miR-34-5p/449-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GGCAGUG | Broadly Conserved | Human (Homo sapiens) Chicken (Gallus gallus) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | CTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAG | 7mer-A1 |
| MARMOSET | CTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAG | 7mer-A1 | |||
| Seed Matches to the miRNA miR-154-3p/487-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AUCAUAC | Conserved | Human (Homo sapiens) | HUMAN | GGGTTTAGGTAATTGTTTAGTTTATGATTGCAGATAAA | 6mer |
| HUMAN | TTAGGTAATTGTTTAGTTTATGATT | 6mer | |||
| HUMAN | TAACCTCTTAGACAGGTGGGAGATTATGATCAGAGTAAAAGGTAATTACACATTTTATTTCCAGAAAGTCAGG | 6mer | |||
| HUMAN | ACCTCTTAGACAGGTGGGAGATTATGATCAGA | 6mer | |||
| HUMAN | CAGGTGGGAGATTATGATCAGA | 6mer | |||
| HUMAN | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 7mer-m8 | |||
| HUMAN | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTT | 7mer-m8 | |||
| HUMAN | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 7mer-m8 | |||
| MARMOSET | GGGTTTAGGTAATTGTTTAGTTTATGATTGCAGATAAA | 6mer | |||
| MARMOSET | TTAGGTAATTGTTTAGTTTATGATT | 6mer | |||
| MARMOSET | TAACCTCTTAGACAGGTGGGAGATTATGATCAGAGTAAAAGGTAATTACACATTTTATTTCCAGAAAGTCAGG | 6mer | |||
| MARMOSET | ACCTCTTAGACAGGTGGGAGATTATGATCAGA | 6mer | |||
| MARMOSET | CAGGTGGGAGATTATGATCAGA | 6mer | |||
| MARMOSET | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 7mer-m8 | |||
| MARMOSET | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTT | 7mer-m8 | |||
| MARMOSET | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 7mer-m8 | |||
| DOG | TTAGGTAATTGTTTAGTTTATGATT | 6mer | |||
| DOG | ACCTCTTAGACAGGTGGGAGATTATGATCAGA | 6mer | |||
| DOG | CAGGTGGGAGATTATGATCAGA | 6mer | |||
| DOG | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTT | 7mer-m8 | |||
| DOG | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 7mer-m8 | |||
| PIG | TTAGGTAATTGTTTAGTTTATGATT | 6mer | |||
| PIG | CAGGTGGGAGATTATGATCAGA | 6mer | |||
| PIG | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 7mer-m8 | |||
| COW | CAGGTGGGAGATTATGATCAGA | 6mer | |||
| Seed Matches to the miRNA miR-224-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AAGUCAC | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | AAGGTGACTTAAACAG | 8mer |
| HUMAN | AATAATGTGACTTCTTAAAAG | 7mer-m8 | |||
| HUMAN | TTTTTTTTTACAGACTTCACAGAGAATGCAGTTGTCTTGACTTCAGGTCTGTCTGTTCTGTTGGCAAGTAA | 6mer | |||
| MARMOSET | AAGGTGACTTAAACAG | 8mer | |||
| MARMOSET | AATAATGTGACTTCTTAAAAG | 7mer-m8 | |||
| MARMOSET | TTTTTTTTTACAGACTTCACAGAGAATGCAGTTGTCTTGACTTCAGGTCTGTCTGTTCTGTTGGCAAGTAA | 6mer | |||
| Seed Matches to the miRNA miR-670-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UUCCUCA | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) | HUMAN | AGCTTGAGGAAAC | 8mer |
| HUMAN | AAGAGTAGCATGAGGAAGGAA | 7mer-m8 | |||
| HUMAN | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAGTTTTAAGCAGTCGT | 8mer | |||
| HUMAN | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 8mer | |||
| HUMAN | AAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 8mer | |||
| HUMAN | AGGCTGAGTGTTGAGGAAAT | 8mer | |||
| MARMOSET | AGCTTGAGGAAAC | 8mer | |||
| MARMOSET | AAGAGTAGCATGAGGAAGGAA | 7mer-m8 | |||
| MARMOSET | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAGTTTTAAGCAGTCGT | 8mer | |||
| MARMOSET | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 8mer | |||
| MARMOSET | AAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 8mer | |||
| MARMOSET | AGGCTGAGTGTTGAGGAAAT | 8mer | |||
| DOG | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 8mer | |||
| DOG | AAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 8mer | |||
| DOG | AGGCTGAGTGTTGAGGAAAT | 8mer | |||
| PIG | AAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 8mer | |||
| PIG | AGGCTGAGTGTTGAGGAAAT | 8mer | |||
| COW | AAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 8mer | |||
| COW | AGGCTGAGTGTTGAGGAAAT | 8mer | |||
| MOUSE | AGGCTGAGTGTTGAGGAAAT | 8mer | |||
| Seed Matches to the miRNA miR-411-5p.2 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UAGUAGA | Conserved | Human (Homo sapiens) Mouse (Mus musculus) | HUMAN | TTAAAACTACTATAG | 6mer |
| HUMAN | ACTACTATAG | 6mer | |||
| MARMOSET | TTAAAACTACTATAG | 6mer | |||
| MARMOSET | ACTACTATAG | 6mer | |||
| DOG | ACTACTATAG | 6mer | |||
| PIG | ACTACTATAG | 6mer | |||
| COW | ACTACTATAG | 6mer | |||
| MOUSE | ACTACTATAG | 6mer | |||
| Seed Matches to the miRNA miR-532-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CUCCCAC | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | TTAATTGGGAGTGGTAGGA | 6mer |
| HUMAN | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAACTTGCATCTGCA | 6mer | |||
| HUMAN | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAA | 6mer | |||
| HUMAN | TCATCTGGGAGCAGAAAACAGCAGGCAGCTGTT | 6mer | |||
| HUMAN | TAACCTCTTAGACAGGTGGGAGATTATGATCAGAGTAAAAGGTAATTACACATTTTATTTCCAGAAAGTCAGG | 8mer | |||
| HUMAN | ACCTCTTAGACAGGTGGGAGATTATGATCAGA | 8mer | |||
| HUMAN | CAGGTGGGAGATTATGATCAGA | 8mer | |||
| HUMAN | CAGGTGGGAGAT | 8mer | |||
| HUMAN | AGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGCATACTCAAAATTTTTTTCCTGGAATTTGGAGGGATGGGAGGAGGGGGTGGGGCTTACTTGTT | 6mer | |||
| MARMOSET | TTAATTGGGAGTGGTAGGA | 6mer | |||
| MARMOSET | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAACTTGCATCTGCA | 6mer | |||
| MARMOSET | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAA | 6mer | |||
| MARMOSET | TCATCTGGGAGCAGAAAACAGCAGGCAGCTGTT | 6mer | |||
| MARMOSET | TAACCTCTTAGACAGGTGGGAGATTATGATCAGAGTAAAAGGTAATTACACATTTTATTTCCAGAAAGTCAGG | 8mer | |||
| MARMOSET | ACCTCTTAGACAGGTGGGAGATTATGATCAGA | 8mer | |||
| MARMOSET | CAGGTGGGAGATTATGATCAGA | 8mer | |||
| MARMOSET | CAGGTGGGAGAT | 8mer | |||
| MARMOSET | AGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGCATACTCAAAATTTTTTTCCTGGAATTTGGAGGGATGGGAGGAGGGGGTGGGGCTTACTTGTT | 6mer | |||
| DOG | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAA | 6mer | |||
| DOG | TCATCTGGGAGCAGAAAACAGCAGGCAGCTGTT | 6mer | |||
| DOG | ACCTCTTAGACAGGTGGGAGATTATGATCAGA | 8mer | |||
| DOG | CAGGTGGGAGATTATGATCAGA | 8mer | |||
| DOG | CAGGTGGGAGAT | 8mer | |||
| PIG | TCATCTGGGAGCAGAAAACAGCAGGCAGCTGTT | 6mer | |||
| PIG | CAGGTGGGAGATTATGATCAGA | 8mer | |||
| PIG | CAGGTGGGAGAT | 8mer | |||
| COW | TCATCTGGGAGCAGAAAACAGCAGGCAGCTGTT | 6mer | |||
| COW | CAGGTGGGAGATTATGATCAGA | 8mer | |||
| COW | CAGGTGGGAGAT | 8mer | |||
| MOUSE | CAGGTGGGAGAT | 8mer | |||
| Seed Matches to the miRNA miR-181-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| ACAUUCA | Broadly Conserved | Human (Homo sapiens) X. tropicalis (Xenopus tropicalis) Chicken (Gallus gallus) Rhesus (Macaca mulatta) Chimp (Pan troglodytes) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | TAACTGATTAAGAATTGTGATAGTTCAGCTTGAATGTCTCTTAGAGGGTGGGCTTTTGTTGATGAGGGAGGGGAAACTTTTTTTTT | 7mer-m8 |
| HUMAN | TCAAAATAATAAACTATTTTTATTAGAGAATGTATACTTTTAGAAAGCTGTCTCCTTATTTAAATAAAATA | 7mer-A1 | |||
| HUMAN | TAGAGAATGTAT | 7mer-A1 | |||
| HUMAN | GAATGTAT | 7mer-A1 | |||
| HUMAN | AGATCAGGATTTGAGCGGAAGAACGAATGTAACTTT | 7mer-A1 | |||
| MARMOSET | TAACTGATTAAGAATTGTGATAGTTCAGCTTGAATGTCTCTTAGAGGGTGGGCTTTTGTTGATGAGGGAGGGGAAACTTTTTTTTT | 7mer-m8 | |||
| MARMOSET | TCAAAATAATAAACTATTTTTATTAGAGAATGTATACTTTTAGAAAGCTGTCTCCTTATTTAAATAAAATA | 7mer-A1 | |||
| MARMOSET | TAGAGAATGTAT | 7mer-A1 | |||
| MARMOSET | GAATGTAT | 7mer-A1 | |||
| MARMOSET | AGATCAGGATTTGAGCGGAAGAACGAATGTAACTTT | 7mer-A1 | |||
| DOG | TAGAGAATGTAT | 7mer-A1 | |||
| DOG | GAATGTAT | 7mer-A1 | |||
| PIG | GAATGTAT | 7mer-A1 | |||
| COW | GAATGTAT | 7mer-A1 | |||
| MOUSE | GAATGTAT | 7mer-A1 | |||
| Seed Matches to the miRNA miR-136-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CUCCAUU | Conserved | Human (Homo sapiens) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | CTTCATGGAGTA | 6mer |
| HUMAN | ATGGAGT | 6mer | |||
| HUMAN | TTAAGATTTTTCAGGTACCCCTCACTAAAGGCACCGAAGGCTTAAAGTAGGACAACCATGGAGCCTTCCTGTGGCA | 6mer | |||
| HUMAN | AAGTAGGACAACCATGGAGCCTTCCTGTGGCA | 6mer | |||
| MARMOSET | CTTCATGGAGTA | 6mer | |||
| MARMOSET | ATGGAGT | 6mer | |||
| MARMOSET | TTAAGATTTTTCAGGTACCCCTCACTAAAGGCACCGAAGGCTTAAAGTAGGACAACCATGGAGCCTTCCTGTGGCA | 6mer | |||
| MARMOSET | AAGTAGGACAACCATGGAGCCTTCCTGTGGCA | 6mer | |||
| DOG | ATGGAGT | 7mer-m8 | |||
| DOG | AAGTAGGACAACCATGGAGCCTTCCTGTGGCA | 6mer | |||
| Seed Matches to the miRNA miR-23-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UCACAUU | Broadly Conserved | Human (Homo sapiens) Chicken (Gallus gallus) Rhesus (Macaca mulatta) Cow (Bos taurus) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | AATAATGTGACTTCTTAAAAG | 7mer-m8 |
| HUMAN | TAATGTGA | 7mer-m8 | |||
| HUMAN | TGGCATGTGAGCAA | 6mer | |||
| HUMAN | GCATGTGAGCA | 6mer | |||
| MARMOSET | AATAATGTGACTTCTTAAAAG | 7mer-m8 | |||
| MARMOSET | TAATGTGA | 7mer-m8 | |||
| MARMOSET | TGGCATGTGAGCAA | 6mer | |||
| MARMOSET | GCATGTGAGCA | 6mer | |||
| DOG | TAATGTGA | 7mer-m8 | |||
| DOG | GCATGTGAGCA | 6mer | |||
| Seed Matches to the miRNA miR-132-3p/212-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AACAGUC | Broadly Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 6mer |
| HUMAN | TGCAGTACTGTTCTGATC | 6mer | |||
| HUMAN | TGCAGTACTGTTCTGA | 6mer | |||
| HUMAN | CAGTACTGTTCTGA | 6mer | |||
| HUMAN | CAGTACTGTTC | 6mer | |||
| MARMOSET | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 6mer | |||
| MARMOSET | TGCAGTACTGTTCTGATC | 6mer | |||
| MARMOSET | TGCAGTACTGTTCTGA | 6mer | |||
| MARMOSET | CAGTACTGTTCTGA | 6mer | |||
| MARMOSET | CAGTACTGTTC | 6mer | |||
| DOG | TGCAGTACTGTTCTGATC | 6mer | |||
| DOG | TGCAGTACTGTTCTGA | 6mer | |||
| DOG | CAGTACTGTTCTGA | 6mer | |||
| DOG | CAGTACTGTTC | 6mer | |||
| PIG | TGCAGTACTGTTCTGA | 6mer | |||
| PIG | CAGTACTGTTCTGA | 6mer | |||
| PIG | CAGTACTGTTC | 6mer | |||
| COW | CAGTACTGTTCTGA | 6mer | |||
| COW | CAGTACTGTTC | 6mer | |||
| MOUSE | CAGTACTGTTC | 6mer | |||
| Seed Matches to the miRNA miR-330-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CAAAGCA | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Rat (Rattus norvegicus) | HUMAN | TGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTC | 6mer |
| HUMAN | GTACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| HUMAN | TACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| HUMAN | CAGTGCAGCTTTGGTTCATA | 6mer | |||
| HUMAN | GCTTTGGTTCA | 6mer | |||
| MARMOSET | TGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTC | 6mer | |||
| MARMOSET | GTACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| MARMOSET | TACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| MARMOSET | CAGTGCAGCTTTGGTTCATA | 6mer | |||
| MARMOSET | GCTTTGGTTCA | 6mer | |||
| DOG | GTACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| DOG | TACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| DOG | CAGTGCAGCTTTGGTTCATA | 6mer | |||
| DOG | GCTTTGGTTCA | 6mer | |||
| PIG | TACAGCACAGTGCAGCTTTGGTTCATA | 6mer | |||
| PIG | CAGTGCAGCTTTGGTTCATA | 6mer | |||
| PIG | GCTTTGGTTCA | 6mer | |||
| COW | CAGTGCAGCTTTGGTTCATA | 6mer | |||
| COW | GCTTTGGTTCA | 6mer | |||
| MOUSE | GCTTTGGTTCA | 6mer | |||
| Seed Matches to the miRNA miR-369-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AUAAUAC | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Cow (Bos taurus) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTCTGATGGTAGCTTTTGTATTATCAAGTAAGATTCT | 7mer-m8 |
| HUMAN | TATTATCAAGTAAGATTCT | 7mer-m8 | |||
| HUMAN | TATTATCAAGTAAGA | 7mer-m8 | |||
| HUMAN | GAGAGACAACAAAGCGCTATTATCCTAAGGTCAAGA | 6mer | |||
| MARMOSET | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTCTGATGGTAGCTTTTGTATTATCAAGTAAGATTCT | 7mer-m8 | |||
| MARMOSET | TATTATCAAGTAAGATTCT | 7mer-m8 | |||
| MARMOSET | TATTATCAAGTAAGA | 7mer-m8 | |||
| MARMOSET | GAGAGACAACAAAGCGCTATTATCCTAAGGTCAAGA | 6mer | |||
| DOG | TATTATCAAGTAAGATTCT | 6mer | |||
| DOG | TATTATCAAGTAAGA | 6mer | |||
| PIG | TATTATCAAGTAAGATTCT | 6mer | |||
| PIG | TATTATCAAGTAAGA | 6mer | |||
| COW | TATTATCAAGTAAGATTCT | 7mer-m8 | |||
| COW | TATTATCAAGTAAGA | 7mer-m8 | |||
| MOUSE | TATTATCAAGTAAGA | 6mer | |||
| Seed Matches to the miRNA miR-1251-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CUCUAGC | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Opossum (Monodelphis domestica) | HUMAN | TAGAAACTAGAGCAGTTCTCAC | 6mer |
| HUMAN | TAGAAACTAGAGCA | 6mer | |||
| MARMOSET | TAGAAACTAGAGCAGTTCTCAC | 6mer | |||
| MARMOSET | TAGAAACTAGAGCA | 6mer | |||
| DOG | TAGAAACTAGAGCA | 6mer | |||
| Seed Matches to the miRNA miR-383-5p.2 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AGAUCAG | Broadly Conserved | Human (Homo sapiens) Mouse (Mus musculus) | HUMAN | CAGTTCAGTGATCTT | 6mer |
| MARMOSET | CAGTTCAGTGATCTT | 6mer | |||
| Seed Matches to the miRNA miR-423-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GAGGGGC | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Cow (Bos taurus) Mouse (Mus musculus) | HUMAN | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACATGCAGGAACA | 6mer |
| HUMAN | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACA | 6mer | |||
| HUMAN | TTAAGATTTTTCAGGTACCCCTCACTAAAGGCACCGAAGGCTTAAAGTAGGACAACCATGGAGCCTTCCTGTGGCA | 7mer-A1 | |||
| HUMAN | TTAAGATTTTTCAGGTACCCCTC | 7mer-A1 | |||
| HUMAN | CTAGCACAGACCCTTCACCCCTCACCTCGATGCAGCC | 7mer-A1 | |||
| HUMAN | CAGACCCTTCACCCCTCACCTCGATGC | 7mer-A1 | |||
| HUMAN | CAGACCCTTCACCCCTCACCT | 7mer-A1 | |||
| MARMOSET | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACATGCAGGAACA | 6mer | |||
| MARMOSET | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACA | 6mer | |||
| MARMOSET | TTAAGATTTTTCAGGTACCCCTCACTAAAGGCACCGAAGGCTTAAAGTAGGACAACCATGGAGCCTTCCTGTGGCA | 7mer-A1 | |||
| MARMOSET | TTAAGATTTTTCAGGTACCCCTC | 7mer-A1 | |||
| MARMOSET | CTAGCACAGACCCTTCACCCCTCACCTCGATGCAGCC | 7mer-A1 | |||
| MARMOSET | CAGACCCTTCACCCCTCACCTCGATGC | 7mer-A1 | |||
| MARMOSET | CAGACCCTTCACCCCTCACCT | 7mer-A1 | |||
| DOG | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACA | 6mer | |||
| DOG | TTAAGATTTTTCAGGTACCCCTC | 6mer | |||
| DOG | CAGACCCTTCACCCCTCACCTCGATGC | 7mer-A1 | |||
| DOG | CAGACCCTTCACCCCTCACCT | 7mer-A1 | |||
| PIG | TTAAGATTTTTCAGGTACCCCTC | 7mer-A1 | |||
| PIG | CAGACCCTTCACCCCTCACCTCGATGC | 7mer-A1 | |||
| PIG | CAGACCCTTCACCCCTCACCT | 7mer-A1 | |||
| COW | TTAAGATTTTTCAGGTACCCCTC | 7mer-A1 | |||
| COW | CAGACCCTTCACCCCTCACCTCGATGC | 7mer-A1 | |||
| COW | CAGACCCTTCACCCCTCACCT | 7mer-A1 | |||
| MOUSE | TTAAGATTTTTCAGGTACCCCTC | 7mer-A1 | |||
| MOUSE | CAGACCCTTCACCCCTCACCT | 7mer-A1 | |||
| Seed Matches to the miRNA miR-877-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UAGAGGA | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) | HUMAN | CTTAAAAGCCTCTAAAGTGAT | 7mer-A1 |
| HUMAN | TGATGAGCATATAATAATTCCAGGCACATGGCAATAGAGGCCCTCTAAATAAGGAATAA | 7mer-A1 | |||
| HUMAN | TAATAATTCCAGGCACATGGCAATAGAGGCCCTCTAAATAAGGAATAA | 7mer-A1 | |||
| MARMOSET | CTTAAAAGCCTCTAAAGTGAT | 7mer-A1 | |||
| MARMOSET | TGATGAGCATATAATAATTCCAGGCACATGGCAATAGAGGCCCTCTAAATAAGGAATAA | 7mer-A1 | |||
| MARMOSET | TAATAATTCCAGGCACATGGCAATAGAGGCCCTCTAAATAAGGAATAA | 7mer-A1 | |||
| DOG | TAATAATTCCAGGCACATGGCAATAGAGGCCCTCTAAATAAGGAATAA | 7mer-A1 | |||
| Seed Matches to the miRNA miR-124-3p.2/506-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UAAGGCA | Broadly Conserved | Human (Homo sapiens) | HUMAN | AAAAACTAAGGCAGAAGGCTTTTGGAAGAGTTAGAAGAATTTGGAAGGCCTTAAA | 7mer-A1 |
| MARMOSET | AAAAACTAAGGCAGAAGGCTTTTGGAAGAGTTAGAAGAATTTGGAAGGCCTTAAA | 7mer-A1 | |||
| Seed Matches to the miRNA miR-31-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GGCAAGA | Broadly Conserved | Human (Homo sapiens) Chicken (Gallus gallus) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | AGGACTTGCCTCAACT | 6mer |
| HUMAN | AGGACTTGCCTCAAC | 6mer | |||
| MARMOSET | AGGACTTGCCTCAACT | 6mer | |||
| MARMOSET | AGGACTTGCCTCAAC | 6mer | |||
| DOG | AGGACTTGCCTCAAC | 6mer | |||
| PIG | AGGACTTGCCTCAAC | 6mer | |||
| Seed Matches to the miRNA miR-455-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AUGUGCC | Broadly Conserved | Human (Homo sapiens) Chicken (Gallus gallus) Rhesus (Macaca mulatta) Cow (Bos taurus) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | TGATGAGCATATAATAATTCCAGGCACATGGCAATAGAGGCCCTCTAAATAAGGAATAA | 7mer-m8 |
| HUMAN | TAATAATTCCAGGCACATGGCAATAGAGGCCCTCTAAATAAGGAATAA | 7mer-m8 | |||
| HUMAN | TAATAATTCCAGGCACATGGC | 7mer-m8 | |||
| MARMOSET | TGATGAGCATATAATAATTCCAGGCACATGGCAATAGAGGCCCTCTAAATAAGGAATAA | 7mer-m8 | |||
| MARMOSET | TAATAATTCCAGGCACATGGCAATAGAGGCCCTCTAAATAAGGAATAA | 7mer-m8 | |||
| MARMOSET | TAATAATTCCAGGCACATGGC | 7mer-m8 | |||
| DOG | TAATAATTCCAGGCACATGGCAATAGAGGCCCTCTAAATAAGGAATAA | 7mer-m8 | |||
| DOG | TAATAATTCCAGGCACATGGC | 7mer-m8 | |||
| PIG | TAATAATTCCAGGCACATGGC | 7mer-m8 | |||
| COW | TAATAATTCCAGGCACATGGC | 7mer-m8 | |||
| Seed Matches to the miRNA miR-381-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AUACAAG | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) | HUMAN | AATTTCAGCAAATCTGTAAGCAGTTTGTATGTTTAGTTGGGGTAATG | 6mer |
| HUMAN | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTCTGATGGTAGCTTTTGTATTATCAAGTAAGATTCT | 6mer | |||
| MARMOSET | AATTTCAGCAAATCTGTAAGCAGTTTGTATGTTTAGTTGGGGTAATG | 6mer | |||
| MARMOSET | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTCTGATGGTAGCTTTTGTATTATCAAGTAAGATTCT | 6mer | |||
| Seed Matches to the miRNA miR-483-3p.2 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CACUCCU | Conserved | Human (Homo sapiens) Mouse (Mus musculus) | HUMAN | TTAATTGGGAGTGGTAGGA | 6mer |
| HUMAN | ATTTTGGGATGGTCTTAACAGGGAAGAGAGAGGGTGGGGGAGAAAATGTTTTTTTCTAAGATTTTCCACAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTAC | 7mer-m8 | |||
| HUMAN | CTCTTTCTGGAGTGAAGCATCC | 7mer-A1 | |||
| MARMOSET | TTAATTGGGAGTGGTAGGA | 6mer | |||
| MARMOSET | ATTTTGGGATGGTCTTAACAGGGAAGAGAGAGGGTGGGGGAGAAAATGTTTTTTTCTAAGATTTTCCACAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTAC | 7mer-m8 | |||
| MARMOSET | CTCTTTCTGGAGTGAAGCATCC | 7mer-A1 | |||
| Seed Matches to the miRNA miR-182-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UUGGCAA | Broadly Conserved | Human (Homo sapiens) X. tropicalis (Xenopus tropicalis) Mouse (Mus musculus) Opossum (Monodelphis domestica) | HUMAN | TGCCAAGGC | 6mer |
| HUMAN | CTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAG | 6mer | |||
| HUMAN | TTATCTGCATATGCCAAAAAA | 7mer-A1 | |||
| HUMAN | AGAGATGAGTTGGGATCAAGTGGATTGAGGAGGCTGTGCTGTGTGCCAAT | 6mer | |||
| HUMAN | TGCCAAT | 6mer | |||
| MARMOSET | TGCCAAGGC | 6mer | |||
| MARMOSET | CTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAG | 6mer | |||
| MARMOSET | TTATCTGCATATGCCAAAAAA | 7mer-A1 | |||
| MARMOSET | AGAGATGAGTTGGGATCAAGTGGATTGAGGAGGCTGTGCTGTGTGCCAAT | 6mer | |||
| MARMOSET | TGCCAAT | 6mer | |||
| DOG | TGCCAAT | 7mer-m8 | |||
| PIG | TGCCAAT | 7mer-m8 | |||
| COW | TGCCAAT | 7mer-m8 | |||
| MOUSE | TGCCAAT | 6mer | |||
| Seed Matches to the miRNA miR-330-3p.2 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AAAGCAC | Conserved | Human (Homo sapiens) Mouse (Mus musculus) | HUMAN | TGCTTTTAGATTA | 6mer |
| HUMAN | GCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTAT | 6mer | |||
| HUMAN | TGGAGCTGCTTTT | 6mer | |||
| HUMAN | CAATGTCCATCTCAAAATACTGCTTTTACAAAAGCAGAATAAAA | 6mer | |||
| HUMAN | CCATCTCAAAATACTGCTTTTACAAAAGCAGAATAAAA | 6mer | |||
| HUMAN | CTCAAAATACTGCTTTTACAAAAGCAGAATAAAA | 6mer | |||
| HUMAN | AATACTGCTTTTACAAAAGCAGAAT | 6mer | |||
| HUMAN | ACTGCTTTTACAAAAGCAGAAT | 6mer | |||
| HUMAN | ATTTTTAGGTAAAATGCTTTT | 6mer | |||
| HUMAN | TTTAGGTAAAATGCTTTT | 6mer | |||
| HUMAN | TTGTTTTCTCAGGTTTTGCTTTTTGGCCTTT | 6mer | |||
| HUMAN | TTGTTTTCTCAGGTTTTGCTTTTT | 6mer | |||
| HUMAN | TCTCAGGTTTTGCTTTT | 6mer | |||
| HUMAN | CAGGTTTTGCTTTT | 6mer | |||
| HUMAN | CAGGTTTTGCTTT | 6mer | |||
| MARMOSET | TGCTTTTAGATTA | 7mer-m8 | |||
| MARMOSET | GCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTAT | 6mer | |||
| MARMOSET | TGGAGCTGCTTTT | 6mer | |||
| MARMOSET | CAATGTCCATCTCAAAATACTGCTTTTACAAAAGCAGAATAAAA | 6mer | |||
| MARMOSET | CCATCTCAAAATACTGCTTTTACAAAAGCAGAATAAAA | 6mer | |||
| MARMOSET | CTCAAAATACTGCTTTTACAAAAGCAGAATAAAA | 6mer | |||
| MARMOSET | AATACTGCTTTTACAAAAGCAGAAT | 6mer | |||
| MARMOSET | ACTGCTTTTACAAAAGCAGAAT | 6mer | |||
| MARMOSET | ATTTTTAGGTAAAATGCTTTT | 6mer | |||
| MARMOSET | TTTAGGTAAAATGCTTTT | 6mer | |||
| MARMOSET | TTGTTTTCTCAGGTTTTGCTTTTTGGCCTTT | 6mer | |||
| MARMOSET | TTGTTTTCTCAGGTTTTGCTTTTT | 6mer | |||
| MARMOSET | TCTCAGGTTTTGCTTTT | 6mer | |||
| MARMOSET | CAGGTTTTGCTTTT | 6mer | |||
| MARMOSET | CAGGTTTTGCTTT | 6mer | |||
| DOG | TGGAGCTGCTTTT | 6mer | |||
| DOG | CCATCTCAAAATACTGCTTTTACAAAAGCAGAATAAAA | 6mer | |||
| DOG | CTCAAAATACTGCTTTTACAAAAGCAGAATAAAA | 6mer | |||
| DOG | AATACTGCTTTTACAAAAGCAGAAT | 6mer | |||
| DOG | ACTGCTTTTACAAAAGCAGAAT | 6mer | |||
| DOG | TTTAGGTAAAATGCTTTT | 6mer | |||
| DOG | TTGTTTTCTCAGGTTTTGCTTTTT | 6mer | |||
| DOG | TCTCAGGTTTTGCTTTT | 6mer | |||
| DOG | CAGGTTTTGCTTTT | 6mer | |||
| DOG | CAGGTTTTGCTTT | 6mer | |||
| PIG | TGGAGCTGCTTTT | 6mer | |||
| PIG | CTCAAAATACTGCTTTTACAAAAGCAGAATAAAA | 6mer | |||
| PIG | AATACTGCTTTTACAAAAGCAGAAT | 6mer | |||
| PIG | ACTGCTTTTACAAAAGCAGAAT | 6mer | |||
| PIG | TTTAGGTAAAATGCTTTT | 6mer | |||
| PIG | TTGTTTTCTCAGGTTTTGCTTTTT | 6mer | |||
| PIG | TCTCAGGTTTTGCTTTT | 6mer | |||
| PIG | CAGGTTTTGCTTTT | 6mer | |||
| PIG | CAGGTTTTGCTTT | 6mer | |||
| COW | AATACTGCTTTTACAAAAGCAGAAT | 6mer | |||
| COW | ACTGCTTTTACAAAAGCAGAAT | 6mer | |||
| COW | TTTAGGTAAAATGCTTTT | 6mer | |||
| COW | TTGTTTTCTCAGGTTTTGCTTTTT | 6mer | |||
| COW | TCTCAGGTTTTGCTTTT | 6mer | |||
| COW | CAGGTTTTGCTTTT | 6mer | |||
| COW | CAGGTTTTGCTTT | 6mer | |||
| MOUSE | ACTGCTTTTACAAAAGCAGAAT | 6mer | |||
| MOUSE | TTGTTTTCTCAGGTTTTGCTTTTT | 6mer | |||
| MOUSE | TCTCAGGTTTTGCTTTT | 6mer | |||
| MOUSE | CAGGTTTTGCTTTT | 6mer | |||
| MOUSE | CAGGTTTTGCTTT | 6mer | |||
| TURTLE | TCTCAGGTTTTGCTTTT | 6mer | |||
| TURTLE | CAGGTTTTGCTTTT | 6mer | |||
| TURTLE | CAGGTTTTGCTTT | 6mer | |||
| ALLIGATOR | TCTCAGGTTTTGCTTTT | 6mer | |||
| ALLIGATOR | CAGGTTTTGCTTTT | 6mer | |||
| ALLIGATOR | CAGGTTTTGCTTT | 6mer | |||
| LIZARD | TCTCAGGTTTTGCTTTT | 6mer | |||
| LIZARD | CAGGTTTTGCTTTT | 6mer | |||
| LIZARD | CAGGTTTTGCTTT | 6mer | |||
| SNAKE | TCTCAGGTTTTGCTTTT | 6mer | |||
| SNAKE | CAGGTTTTGCTTTT | 6mer | |||
| SNAKE | CAGGTTTTGCTTT | 6mer | |||
| X.TROPICALIS | CAGGTTTTGCTTTT | 6mer | |||
| X.TROPICALIS | CAGGTTTTGCTTT | 6mer | |||
| SHARK | CAGGTTTTGCTTTT | 6mer | |||
| SHARK | CAGGTTTTGCTTT | 6mer | |||
| OPOSSUM | CAGGTTTTGCTTTT | 6mer | |||
| OPOSSUM | CAGGTTTTGCTTT | 6mer | |||
| SPOTTEDGAR | CAGGTTTTGCTTTT | 6mer | |||
| SPOTTEDGAR | CAGGTTTTGCTTT | 6mer | |||
| FUGU | CAGGTTTTGCTTTT | 6mer | |||
| FUGU | CAGGTTTTGCTTT | 6mer | |||
| NILETILAPIA | CAGGTTTTGCTTTT | 6mer | |||
| NILETILAPIA | CAGGTTTTGCTTT | 6mer | |||
| STICKLEBACK | CAGGTTTTGCTTT | 6mer | |||
| MEDAKA | CAGGTTTTGCTTT | 6mer | |||
| ZEBRAFISH | CAGGTTTTGCTTT | 6mer | |||
| Seed Matches to the miRNA miR-18-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AAGGUGC | Broadly Conserved | Human (Homo sapiens) X. tropicalis (Xenopus tropicalis) Chicken (Gallus gallus) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | GCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTAT | 6mer |
| HUMAN | TGCTGTTGGCACGAACACCTTCAGGGA | 6mer | |||
| HUMAN | AACACCTTCAGGGA | 6mer | |||
| HUMAN | ACACCTTCAGGGA | 6mer | |||
| MARMOSET | GCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTAT | 6mer | |||
| MARMOSET | TGCTGTTGGCACGAACACCTTCAGGGA | 6mer | |||
| MARMOSET | AACACCTTCAGGGA | 6mer | |||
| MARMOSET | ACACCTTCAGGGA | 6mer | |||
| DOG | TGCTGTTGGCACGAACACCTTCAGGGA | 6mer | |||
| DOG | AACACCTTCAGGGA | 6mer | |||
| DOG | ACACCTTCAGGGA | 6mer | |||
| PIG | AACACCTTCAGGGA | 6mer | |||
| PIG | ACACCTTCAGGGA | 6mer | |||
| COW | AACACCTTCAGGGA | 6mer | |||
| COW | ACACCTTCAGGGA | 6mer | |||
| MOUSE | ACACCTTCAGGGA | 6mer | |||
| Seed Matches to the miRNA miR-496.1 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GAGUAUU | Conserved | Human (Homo sapiens) | HUMAN | AGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGCATACTCAAAATTTTTTTCCTGGAATTTGGAGGGATGGGAGGAGGGGGTGGGGCTTACTTGTT | 7mer-A1 |
| MARMOSET | AGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGCATACTCAAAATTTTTTTCCTGGAATTTGGAGGGATGGGAGGAGGGGGTGGGGCTTACTTGTT | 7mer-A1 | |||
| Seed Matches to the miRNA miR-145-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UCCAGUU | Broadly Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | ACTGGAAGACAGAAGTAC | 8mer |
| HUMAN | GCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTAT | 6mer | |||
| HUMAN | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 6mer | |||
| HUMAN | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTT | 6mer | |||
| HUMAN | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 6mer | |||
| HUMAN | TGAAACGACTGGAGTATGA | 6mer | |||
| HUMAN | CGACTGGAGTATGA | 6mer | |||
| MARMOSET | ACTGGAAGACAGAAGTAC | 7mer-A1 | |||
| MARMOSET | GCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTAT | 6mer | |||
| MARMOSET | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 6mer | |||
| MARMOSET | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTT | 6mer | |||
| MARMOSET | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 6mer | |||
| MARMOSET | TGAAACGACTGGAGTATGA | 6mer | |||
| MARMOSET | CGACTGGAGTATGA | 6mer | |||
| DOG | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTT | 6mer | |||
| DOG | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 6mer | |||
| DOG | TGAAACGACTGGAGTATGA | 6mer | |||
| DOG | CGACTGGAGTATGA | 6mer | |||
| PIG | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 6mer | |||
| PIG | TGAAACGACTGGAGTATGA | 6mer | |||
| PIG | CGACTGGAGTATGA | 6mer | |||
| COW | TGAAACGACTGGAGTATGA | 6mer | |||
| COW | CGACTGGAGTATGA | 6mer | |||
| MOUSE | CGACTGGAGTATGA | 6mer | |||
| Seed Matches to the miRNA miR-203a-3p.1 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GAAAUGU | Broadly Conserved | Human (Homo sapiens) | HUMAN | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAACTTGCATCTGCA | 7mer-A1 |
| HUMAN | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAA | 7mer-A1 | |||
| HUMAN | TTTTTCACATTTCCA | 7mer-m8 | |||
| HUMAN | TTTTAAAGAATTTTCCTTTGCAGAGGCATTTCATCCTTCATGAAGC | 7mer-A1 | |||
| HUMAN | CATTTCATCCTTCATGAAGC | 7mer-A1 | |||
| HUMAN | TTCATTTCTG | 6mer | |||
| MARMOSET | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAACTTGCATCTGCA | 7mer-A1 | |||
| MARMOSET | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAA | 7mer-A1 | |||
| MARMOSET | TTTTTCACATTTCCA | 7mer-m8 | |||
| MARMOSET | TTTTAAAGAATTTTCCTTTGCAGAGGCATTTCATCCTTCATGAAGC | 7mer-A1 | |||
| MARMOSET | CATTTCATCCTTCATGAAGC | 7mer-A1 | |||
| MARMOSET | TTCATTTCTG | 6mer | |||
| DOG | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAA | 7mer-A1 | |||
| DOG | CATTTCATCCTTCATGAAGC | 7mer-A1 | |||
| Seed Matches to the miRNA miR-365-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AAUGCCC | Broadly Conserved | Human (Homo sapiens) Chicken (Gallus gallus) Rhesus (Macaca mulatta) Cow (Bos taurus) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | AGGCATTGAGG | 6mer |
| HUMAN | TCACTCAGAGGCATTTGCATCT | 6mer | |||
| HUMAN | TTTTAAAGAATTTTCCTTTGCAGAGGCATTTCATCCTTCATGAAGC | 6mer | |||
| MARMOSET | AGGCATTGAGG | 6mer | |||
| MARMOSET | TCACTCAGAGGCATTTGCATCT | 6mer | |||
| MARMOSET | TTTTAAAGAATTTTCCTTTGCAGAGGCATTTCATCCTTCATGAAGC | 6mer | |||
| Seed Matches to the miRNA miR-342-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CUCACAC | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | TGGCATGTGAGCAA | 6mer |
| HUMAN | GCATGTGAGCA | 6mer | |||
| MARMOSET | TGGCATGTGAGCAA | 6mer | |||
| MARMOSET | GCATGTGAGCA | 6mer | |||
| DOG | GCATGTGAGCA | 6mer | |||
| Seed Matches to the miRNA miR-146-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GAGAACU | Broadly Conserved | Human (Homo sapiens) Chicken (Gallus gallus) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | TAGAAACTAGAGCAGTTCTCAC | 8mer |
| HUMAN | GGATATGGTAGTGTGTGGTTCTCTTTTGGAATTTTTTTCAGGTGATTTAATA | 6mer | |||
| HUMAN | TAGTGTGTGGTTCTCT | 6mer | |||
| MARMOSET | TAGAAACTAGAGCAGTTCTCAC | 8mer | |||
| MARMOSET | GGATATGGTAGTGTGTGGTTCTCTTTTGGAATTTTTTTCAGGTGATTTAATA | 6mer | |||
| MARMOSET | TAGTGTGTGGTTCTCT | 6mer | |||
| DOG | GGATATGGTAGTGTGTGGTTCTCTTTTGGAATTTTTTTCAGGTGATTTAATA | 6mer | |||
| DOG | TAGTGTGTGGTTCTCT | 6mer | |||
| PIG | GGATATGGTAGTGTGTGGTTCTCTTTTGGAATTTTTTTCAGGTGATTTAATA | 6mer | |||
| PIG | TAGTGTGTGGTTCTCT | 6mer | |||
| COW | TAGTGTGTGGTTCTCT | 6mer | |||
| MOUSE | TAGTGTGTGGTTCTCT | 6mer | |||
| Seed Matches to the miRNA miR-339-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CCCUGUC | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) | HUMAN | ACAGGGAA | 7mer-A1 |
| HUMAN | ATTTTGGGATGGTCTTAACAGGGAAGAGAGAGGGTGGGGGAGAAAATGTTTTTTTCTAAGATTTTCCACAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTAC | 7mer-A1 | |||
| HUMAN | TGGTCTTAACAGGGAAGAG | 7mer-A1 | |||
| HUMAN | AACAGGGAAGAG | 7mer-A1 | |||
| HUMAN | AACAGGGA | 7mer-A1 | |||
| MARMOSET | ACAGGGAA | 7mer-A1 | |||
| MARMOSET | ATTTTGGGATGGTCTTAACAGGGAAGAGAGAGGGTGGGGGAGAAAATGTTTTTTTCTAAGATTTTCCACAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTAC | 7mer-A1 | |||
| MARMOSET | TGGTCTTAACAGGGAAGAG | 7mer-A1 | |||
| MARMOSET | AACAGGGAAGAG | 7mer-A1 | |||
| MARMOSET | AACAGGGA | 7mer-A1 | |||
| DOG | TGGTCTTAACAGGGAAGAG | 7mer-A1 | |||
| DOG | AACAGGGAAGAG | 7mer-A1 | |||
| DOG | AACAGGGA | 7mer-A1 | |||
| PIG | TGGTCTTAACAGGGAAGAG | 7mer-A1 | |||
| PIG | AACAGGGAAGAG | 7mer-A1 | |||
| PIG | AACAGGGA | 7mer-A1 | |||
| COW | AACAGGGAAGAG | 7mer-A1 | |||
| COW | AACAGGGA | 7mer-A1 | |||
| MOUSE | AACAGGGA | 7mer-A1 | |||
| Seed Matches to the miRNA miR-489-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UGACAUC | Broadly Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Rat (Rattus norvegicus) | HUMAN | TGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGA | 6mer |
| MARMOSET | TGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGA | 6mer | |||
| Seed Matches to the miRNA miR-185-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GGAGAGA | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACATGCAGGAACA | 7mer-m8 |
| HUMAN | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACA | 7mer-m8 | |||
| MARMOSET | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACATGCAGGAACA | 7mer-m8 | |||
| MARMOSET | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACA | 7mer-m8 | |||
| DOG | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACA | 7mer-m8 | |||
| Seed Matches to the miRNA miR-137 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UAUUGCU | Broadly Conserved | Human (Homo sapiens) Chimp (Pan troglodytes) Dog (Canis lupus familiaris) Cow (Bos taurus) | HUMAN | GAGTGGTTGGTAAAAATCCGTGAGGTCGGCAATATGTTGTTTTTCTGGAACTT | 6mer |
| HUMAN | TGATGAGCATATAATAATTCCAGGCACATGGCAATAGAGGCCCTCTAAATAAGGAATAA | 6mer | |||
| HUMAN | TAATAATTCCAGGCACATGGCAATAGAGGCCCTCTAAATAAGGAATAA | 6mer | |||
| MARMOSET | GAGTGGTTGGTAAAAATCCGTGAGGTCGGCAATATGTTGTTTTTCTGGAACTT | 6mer | |||
| MARMOSET | TGATGAGCATATAATAATTCCAGGCACATGGCAATAGAGGCCCTCTAAATAAGGAATAA | 6mer | |||
| MARMOSET | TAATAATTCCAGGCACATGGCAATAGAGGCCCTCTAAATAAGGAATAA | 6mer | |||
| DOG | TAATAATTCCAGGCACATGGCAATAGAGGCCCTCTAAATAAGGAATAA | 6mer | |||
| Seed Matches to the miRNA miR-217 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| ACUGCAU | Broadly Conserved | Human (Homo sapiens) X. tropicalis (Xenopus tropicalis) Rhesus (Macaca mulatta) Chimp (Pan troglodytes) Dog (Canis lupus familiaris) Cow (Bos taurus) | HUMAN | AGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGCATACTCAAAATTTTTTTCCTGGAATTTGGAGGGATGGGAGGAGGGGGTGGGGCTTACTTGTT | 6mer |
| HUMAN | TGAGACCTTGCAGTG | 6mer | |||
| HUMAN | AGACCTTGCAGTG | 6mer | |||
| HUMAN | TGCAGTG | 6mer | |||
| HUMAN | TTTTTTTTTACAGACTTCACAGAGAATGCAGTTGTCTTGACTTCAGGTCTGTCTGTTCTGTTGGCAAGTAA | 7mer-m8 | |||
| HUMAN | AGAATGCAGTTGTCTTGAC | 7mer-m8 | |||
| HUMAN | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 8mer | |||
| HUMAN | TGCAGTACTGTTCTGATC | 8mer | |||
| HUMAN | TGCAGTACTGTTCTGA | 8mer | |||
| HUMAN | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAGTTTTAAGCAGTCGT | 6mer | |||
| MARMOSET | AGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGCATACTCAAAATTTTTTTCCTGGAATTTGGAGGGATGGGAGGAGGGGGTGGGGCTTACTTGTT | 6mer | |||
| MARMOSET | TGAGACCTTGCAGTG | 6mer | |||
| MARMOSET | AGACCTTGCAGTG | 6mer | |||
| MARMOSET | TGCAGTG | 6mer | |||
| MARMOSET | TTTTTTTTTACAGACTTCACAGAGAATGCAGTTGTCTTGACTTCAGGTCTGTCTGTTCTGTTGGCAAGTAA | 7mer-m8 | |||
| MARMOSET | AGAATGCAGTTGTCTTGAC | 7mer-m8 | |||
| MARMOSET | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 8mer | |||
| MARMOSET | TGCAGTACTGTTCTGATC | 8mer | |||
| MARMOSET | TGCAGTACTGTTCTGA | 8mer | |||
| MARMOSET | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAGTTTTAAGCAGTCGT | 6mer | |||
| DOG | TGAGACCTTGCAGTG | 6mer | |||
| DOG | AGACCTTGCAGTG | 6mer | |||
| DOG | TGCAGTG | 6mer | |||
| DOG | AGAATGCAGTTGTCTTGAC | 7mer-m8 | |||
| DOG | TGCAGTACTGTTCTGATC | 8mer | |||
| DOG | TGCAGTACTGTTCTGA | 8mer | |||
| PIG | TGAGACCTTGCAGTG | 6mer | |||
| PIG | AGACCTTGCAGTG | 6mer | |||
| PIG | TGCAGTG | 6mer | |||
| PIG | AGAATGCAGTTGTCTTGAC | 7mer-m8 | |||
| PIG | TGCAGTACTGTTCTGA | 8mer | |||
| COW | AGACCTTGCAGTG | 6mer | |||
| COW | TGCAGTG | 6mer | |||
| COW | AGAATGCAGTTGTCTTGAC | 7mer-m8 | |||
| MOUSE | AGACCTTGCAGTG | 6mer | |||
| MOUSE | TGCAGTG | 6mer | |||
| TURTLE | TGCAGTG | 6mer | |||
| ALLIGATOR | TGCAGTG | 6mer | |||
| LIZARD | TGCAGTG | 6mer | |||
| SNAKE | TGCAGTG | 7mer-m8 | |||
| Seed Matches to the miRNA miR-183-5p.2 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UGGCACU | Broadly Conserved | Human (Homo sapiens) Mouse (Mus musculus) | HUMAN | AGAGATGAGTTGGGATCAAGTGGATTGAGGAGGCTGTGCTGTGTGCCAAT | 7mer-A1 |
| MARMOSET | AGAGATGAGTTGGGATCAAGTGGATTGAGGAGGCTGTGCTGTGTGCCAAT | 7mer-A1 | |||
| Seed Matches to the miRNA miR-216b-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AAUCUCU | Broadly Conserved | Human (Homo sapiens) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | TTTAAAAAGAGATTAA | 8mer |
| HUMAN | TGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGA | 6mer | |||
| HUMAN | TAACCTCTTAGACAGGTGGGAGATTATGATCAGAGTAAAAGGTAATTACACATTTTATTTCCAGAAAGTCAGG | 7mer-A1 | |||
| HUMAN | ACCTCTTAGACAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| HUMAN | CAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| MARMOSET | TTTAAAAAGAGATTAA | 8mer | |||
| MARMOSET | TGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGA | 6mer | |||
| MARMOSET | TAACCTCTTAGACAGGTGGGAGATTATGATCAGAGTAAAAGGTAATTACACATTTTATTTCCAGAAAGTCAGG | 7mer-A1 | |||
| MARMOSET | ACCTCTTAGACAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| MARMOSET | CAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| DOG | ACCTCTTAGACAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| DOG | CAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| PIG | CAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| COW | CAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| Seed Matches to the miRNA miR-320 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AAAGCUG | Conserved | Human (Homo sapiens) X. tropicalis (Xenopus tropicalis) Rhesus (Macaca mulatta) Chimp (Pan troglodytes) Dog (Canis lupus familiaris) | HUMAN | CTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAG | 6mer |
| HUMAN | ATCTTGTCTGAAGCTTTTGAGGGCAGACT | 6mer | |||
| HUMAN | AGCTTTTGAGGGCAGACT | 6mer | |||
| HUMAN | AGCTTTTGAGGGC | 6mer | |||
| HUMAN | TGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTC | 7mer-m8 | |||
| HUMAN | GTACAGCACAGTGCAGCTTTGGTTCATA | 7mer-m8 | |||
| HUMAN | TACAGCACAGTGCAGCTTTGGTTCATA | 7mer-m8 | |||
| HUMAN | CAGTGCAGCTTTGGTTCATA | 7mer-m8 | |||
| HUMAN | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTCTGATGGTAGCTTTTGTATTATCAAGTAAGATTCT | 6mer | |||
| HUMAN | TGGTAGCTTTT | 6mer | |||
| HUMAN | TAGCTTTT | 6mer | |||
| HUMAN | AACAGGTGAACAAGCTTTTTCTGTATTTACAT | 6mer | |||
| HUMAN | AGTATTGAATAGATTTCAGCTTTATGCTGGAGTAA | 8mer | |||
| HUMAN | CAGCTTTATGCTGGA | 8mer | |||
| HUMAN | CAGCTTTA | 8mer | |||
| HUMAN | TTTTCCCTAGCTTTTCCAGAAGCCTGTTAAAAGCAAGGTCTCCCCACAAGCAACTTCTCTGCCACATCGCCACCC | 6mer | |||
| HUMAN | TTTTCCCTAGCTTTTCCAGAAGCCTGTTAAAA | 6mer | |||
| HUMAN | TCCCTAGCTTTTCCAGAA | 6mer | |||
| HUMAN | AGCTTTTCCAGAA | 6mer | |||
| MARMOSET | CTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAG | 6mer | |||
| MARMOSET | ATCTTGTCTGAAGCTTTTGAGGGCAGACT | 6mer | |||
| MARMOSET | AGCTTTTGAGGGCAGACT | 6mer | |||
| MARMOSET | AGCTTTTGAGGGC | 6mer | |||
| MARMOSET | TGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTC | 7mer-m8 | |||
| MARMOSET | GTACAGCACAGTGCAGCTTTGGTTCATA | 7mer-m8 | |||
| MARMOSET | TACAGCACAGTGCAGCTTTGGTTCATA | 7mer-m8 | |||
| MARMOSET | CAGTGCAGCTTTGGTTCATA | 7mer-m8 | |||
| MARMOSET | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTCTGATGGTAGCTTTTGTATTATCAAGTAAGATTCT | 6mer | |||
| MARMOSET | TGGTAGCTTTT | 6mer | |||
| MARMOSET | TAGCTTTT | 6mer | |||
| MARMOSET | AACAGGTGAACAAGCTTTTTCTGTATTTACAT | 6mer | |||
| MARMOSET | AGTATTGAATAGATTTCAGCTTTATGCTGGAGTAA | 8mer | |||
| MARMOSET | CAGCTTTATGCTGGA | 8mer | |||
| MARMOSET | CAGCTTTA | 8mer | |||
| MARMOSET | TTTTCCCTAGCTTTTCCAGAAGCCTGTTAAAAGCAAGGTCTCCCCACAAGCAACTTCTCTGCCACATCGCCACCC | 6mer | |||
| MARMOSET | TTTTCCCTAGCTTTTCCAGAAGCCTGTTAAAA | 6mer | |||
| MARMOSET | TCCCTAGCTTTTCCAGAA | 6mer | |||
| MARMOSET | AGCTTTTCCAGAA | 6mer | |||
| DOG | ATCTTGTCTGAAGCTTTTGAGGGCAGACT | 6mer | |||
| DOG | AGCTTTTGAGGGCAGACT | 6mer | |||
| DOG | AGCTTTTGAGGGC | 6mer | |||
| DOG | GTACAGCACAGTGCAGCTTTGGTTCATA | 7mer-m8 | |||
| DOG | TACAGCACAGTGCAGCTTTGGTTCATA | 7mer-m8 | |||
| DOG | CAGTGCAGCTTTGGTTCATA | 7mer-m8 | |||
| DOG | TGGTAGCTTTT | 6mer | |||
| DOG | TAGCTTTT | 6mer | |||
| DOG | CAGCTTTATGCTGGA | 8mer | |||
| DOG | CAGCTTTA | 8mer | |||
| DOG | TTTTCCCTAGCTTTTCCAGAAGCCTGTTAAAA | 6mer | |||
| DOG | TCCCTAGCTTTTCCAGAA | 6mer | |||
| DOG | AGCTTTTCCAGAA | 6mer | |||
| PIG | ATCTTGTCTGAAGCTTTTGAGGGCAGACT | 6mer | |||
| PIG | AGCTTTTGAGGGCAGACT | 6mer | |||
| PIG | AGCTTTTGAGGGC | 6mer | |||
| PIG | TACAGCACAGTGCAGCTTTGGTTCATA | 7mer-m8 | |||
| PIG | CAGTGCAGCTTTGGTTCATA | 7mer-m8 | |||
| PIG | TGGTAGCTTTT | 6mer | |||
| PIG | TAGCTTTT | 6mer | |||
| PIG | CAGCTTTATGCTGGA | 8mer | |||
| PIG | CAGCTTTA | 8mer | |||
| PIG | TCCCTAGCTTTTCCAGAA | 6mer | |||
| PIG | AGCTTTTCCAGAA | 6mer | |||
| COW | AGCTTTTGAGGGCAGACT | 6mer | |||
| COW | AGCTTTTGAGGGC | 6mer | |||
| COW | CAGTGCAGCTTTGGTTCATA | 7mer-m8 | |||
| COW | TGGTAGCTTTT | 6mer | |||
| COW | TAGCTTTT | 6mer | |||
| COW | CAGCTTTA | 8mer | |||
| COW | TCCCTAGCTTTTCCAGAA | 6mer | |||
| COW | AGCTTTTCCAGAA | 6mer | |||
| MOUSE | AGCTTTTGAGGGC | 6mer | |||
| MOUSE | TAGCTTTT | 6mer | |||
| MOUSE | AGCTTTTCCAGAA | 7mer-m8 | |||
| Seed Matches to the miRNA miR-28-5p/708-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AGGAGCU | Conserved | Human (Homo sapiens) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | AACAGCTCCTTGGTGAA | 7mer-m8 |
| MARMOSET | AACAGCTCCTTGGTGAA | 7mer-m8 | |||
| Seed Matches to the miRNA miR-544a-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CUUGUUA | Conserved | Human (Homo sapiens) | HUMAN | AAACAAGAAAATCCA | 7mer-A1 |
| HUMAN | CCAAACAAGCAACA | 6mer | |||
| HUMAN | AACAGGTGAACAAGCTTTTTCTGTATTTACAT | 6mer | |||
| MARMOSET | AAACAAGAAAATCCA | 7mer-A1 | |||
| MARMOSET | CCAAACAAGCAACA | 6mer | |||
| MARMOSET | AACAGGTGAACAAGCTTTTTCTGTATTTACAT | 6mer | |||
| DOG | CCAAACAAGCAACA | 6mer | |||
| Seed Matches to the miRNA miR-142-3p.2 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UAGUGUU | Broadly Conserved | Human (Homo sapiens) Mouse (Mus musculus) | HUMAN | TAGGCAATGTTTTACACTATTG | 6mer |
| MARMOSET | TAGGCAATGTTTTACACTATTG | 6mer | |||
| Seed Matches to the miRNA miR-496.2 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GUAUUAC | Conserved | Human (Homo sapiens) | HUMAN | ATTAATACAACT | 7mer-A1 |
| HUMAN | TAATAC | 7mer-A1 | |||
| HUMAN | GAATTAATACC | 6mer | |||
| MARMOSET | ATTAATACAACT | 7mer-A1 | |||
| MARMOSET | TAATAC | 7mer-A1 | |||
| MARMOSET | GAATTAATACC | 6mer | |||
| DOG | TAATAC | 6mer | |||
| Seed Matches to the miRNA miR-124-3p.1 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AAGGCAC | Broadly Conserved | Human (Homo sapiens) Mouse (Mus musculus) | HUMAN | GTGCCTTT | 7mer-m8 |
| HUMAN | TGCCTTT | 7mer-m8 | |||
| MARMOSET | GTGCCTTT | 7mer-m8 | |||
| MARMOSET | TGCCTTT | 7mer-m8 | |||
| DOG | TGCCTTT | 6mer | |||
| PIG | TGCCTTT | 6mer | |||
| COW | TGCCTTT | 7mer-m8 | |||
| Seed Matches to the miRNA miR-455-3p.1 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CAGUCCA | Broadly Conserved | Human (Homo sapiens) Mouse (Mus musculus) | HUMAN | TGAAGCTAGGACTGAGGAGCAA | 7mer-A1 |
| HUMAN | TGAAGCTAGGACTGAGGAGC | 7mer-A1 | |||
| HUMAN | CTAGGACTGAGGAGC | 7mer-A1 | |||
| HUMAN | AGGACTGAGGAGC | 7mer-A1 | |||
| HUMAN | GCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTAT | 6mer | |||
| MARMOSET | TGAAGCTAGGACTGAGGAGCAA | 7mer-A1 | |||
| MARMOSET | TGAAGCTAGGACTGAGGAGC | 7mer-A1 | |||
| MARMOSET | CTAGGACTGAGGAGC | 7mer-A1 | |||
| MARMOSET | AGGACTGAGGAGC | 7mer-A1 | |||
| MARMOSET | GCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTAT | 6mer | |||
| DOG | TGAAGCTAGGACTGAGGAGC | 7mer-A1 | |||
| DOG | CTAGGACTGAGGAGC | 7mer-A1 | |||
| DOG | AGGACTGAGGAGC | 7mer-A1 | |||
| PIG | CTAGGACTGAGGAGC | 7mer-A1 | |||
| PIG | AGGACTGAGGAGC | 7mer-A1 | |||
| COW | CTAGGACTGAGGAGC | 7mer-A1 | |||
| COW | AGGACTGAGGAGC | 7mer-A1 | |||
| MOUSE | AGGACTGAGGAGC | 7mer-A1 | |||
| Seed Matches to the miRNA miR-200bc-3p/429 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AAUACUG | Broadly Conserved | Human (Homo sapiens) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | GCTAAGACAAGTATTGGA | 6mer |
| HUMAN | AGTATTTCA | 6mer | |||
| HUMAN | TGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTC | 6mer | |||
| HUMAN | TGGAAGAGTATTCCCAGTTGAAGCTGAAA | 6mer | |||
| HUMAN | GAGTATTCCCAGT | 6mer | |||
| HUMAN | AGTATTGAATAGATTTCAGCTTTATGCTGGAGTAA | 6mer | |||
| MARMOSET | GCTAAGACAAGTATTGGA | 6mer | |||
| MARMOSET | AGTATTTCA | 7mer-m8 | |||
| MARMOSET | TGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTC | 6mer | |||
| MARMOSET | TGGAAGAGTATTCCCAGTTGAAGCTGAAA | 6mer | |||
| MARMOSET | GAGTATTCCCAGT | 6mer | |||
| MARMOSET | AGTATTGAATAGATTTCAGCTTTATGCTGGAGTAA | 7mer-m8 | |||
| DOG | TGGAAGAGTATTCCCAGTTGAAGCTGAAA | 6mer | |||
| DOG | GAGTATTCCCAGT | 6mer | |||
| PIG | GAGTATTCCCAGT | 6mer | |||
| COW | GAGTATTCCCAGT | 6mer | |||
| Seed Matches to the miRNA miR-7-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GGAAGAC | Broadly Conserved | Human (Homo sapiens) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | TTGCATATGAGTGCTTGGCTCTTCCTTCTGTTCT | 6mer |
| HUMAN | GCTTGGCTCTTCCTTCTGTTCT | 6mer | |||
| MARMOSET | TTGCATATGAGTGCTTGGCTCTTCCTTCTGTTCT | 6mer | |||
| MARMOSET | GCTTGGCTCTTCCTTCTGTTCT | 6mer | |||
| DOG | GCTTGGCTCTTCCTTCTGTTCT | 6mer | |||
| Seed Matches to the miRNA miR-199-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CAGUAGU | Broadly Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Cow (Bos taurus) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | TGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGA | 8mer |
| HUMAN | ACTACTGATGA | 8mer | |||
| MARMOSET | TGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGA | 8mer | |||
| MARMOSET | ACTACTGATGA | 8mer | |||
| DOG | ACTACTGATGA | 8mer | |||
| PIG | ACTACTGATGA | 8mer | |||
| Seed Matches to the miRNA miR-409-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AAUGUUG | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) | HUMAN | AAACCAAACATTCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCA | 6mer |
| HUMAN | TTAACATTTAAGC | 6mer | |||
| MARMOSET | AAACCAAACATTCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCA | 6mer | |||
| MARMOSET | TTAACATTTAAGC | 6mer | |||
| Seed Matches to the miRNA miR-340-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UAUAAAG | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | GGGATTTATATGGGGA | 6mer |
| HUMAN | AGCTGTTTTTATAGCAGCTCTTAA | 6mer | |||
| HUMAN | TTTTATAGCAGCT | 6mer | |||
| MARMOSET | GGGATTTATATGGGGA | 6mer | |||
| MARMOSET | AGCTGTTTTTATAGCAGCTCTTAA | 6mer | |||
| MARMOSET | TTTTATAGCAGCT | 6mer | |||
| DOG | TTTTATAGCAGCT | 6mer | |||
| Seed Matches to the miRNA miR-17-5p/20-5p/93-5p/106-5p/519-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AAAGUGC | Broadly Conserved | Human (Homo sapiens) | HUMAN | CCATGGCACTTT | 7mer-m8 |
| MARMOSET | CCATGGCACTTT | 7mer-m8 | |||
| Seed Matches to the miRNA miR-142-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AUAAAGU | Broadly Conserved | Human (Homo sapiens) X. tropicalis (Xenopus tropicalis) Rhesus (Macaca mulatta) Cow (Bos taurus) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | AGTATTGAATAGATTTCAGCTTTATGCTGGAGTAA | 6mer |
| HUMAN | CAGCTTTATGCTGGA | 6mer | |||
| MARMOSET | AGTATTGAATAGATTTCAGCTTTATGCTGGAGTAA | 6mer | |||
| MARMOSET | CAGCTTTATGCTGGA | 6mer | |||
| DOG | CAGCTTTATGCTGGA | 6mer | |||
| PIG | CAGCTTTATGCTGGA | 6mer | |||
| Seed Matches to the miRNA miR-1-3p/206 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GGAAUGU | Broadly Conserved | Human (Homo sapiens) Chicken (Gallus gallus) Rhesus (Macaca mulatta) Opossum (Monodelphis domestica) | HUMAN | AAACCAAACATTCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCA | 8mer |
| MARMOSET | AAACCAAACATTCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCA | 8mer | |||
| Seed Matches to the miRNA miR-379-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GGUAGAC | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Rat (Rattus norvegicus) | HUMAN | CTACCAATTTAAAGTTACGGAATCTACCATTTTAAAGTTAATTGCTTGTCAAGCTATAAC | 7mer-A1 |
| HUMAN | GGAATCTACCATTT | 7mer-A1 | |||
| MARMOSET | CTACCAATTTAAAGTTACGGAATCTACCATTTTAAAGTTAATTGCTTGTCAAGCTATAAC | 7mer-A1 | |||
| MARMOSET | GGAATCTACCATTT | 7mer-A1 | |||
| DOG | GGAATCTACCATTT | 7mer-A1 | |||
| Seed Matches to the miRNA miR-150-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CUCCCAA | Broadly Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | TTAATTGGGAGTGGTAGGA | 7mer-m8 |
| HUMAN | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAACTTGCATCTGCA | 6mer | |||
| HUMAN | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAA | 6mer | |||
| HUMAN | TCATCTGGGAGCAGAAAACAGCAGGCAGCTGTT | 6mer | |||
| HUMAN | TAACCTCTTAGACAGGTGGGAGATTATGATCAGAGTAAAAGGTAATTACACATTTTATTTCCAGAAAGTCAGG | 7mer-A1 | |||
| HUMAN | ACCTCTTAGACAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| HUMAN | CAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| HUMAN | CAGGTGGGAGAT | 7mer-A1 | |||
| HUMAN | AGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGCATACTCAAAATTTTTTTCCTGGAATTTGGAGGGATGGGAGGAGGGGGTGGGGCTTACTTGTT | 6mer | |||
| MARMOSET | TTAATTGGGAGTGGTAGGA | 7mer-m8 | |||
| MARMOSET | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAACTTGCATCTGCA | 6mer | |||
| MARMOSET | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAA | 6mer | |||
| MARMOSET | TCATCTGGGAGCAGAAAACAGCAGGCAGCTGTT | 6mer | |||
| MARMOSET | TAACCTCTTAGACAGGTGGGAGATTATGATCAGAGTAAAAGGTAATTACACATTTTATTTCCAGAAAGTCAGG | 7mer-A1 | |||
| MARMOSET | ACCTCTTAGACAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| MARMOSET | CAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| MARMOSET | CAGGTGGGAGAT | 7mer-A1 | |||
| MARMOSET | AGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGCATACTCAAAATTTTTTTCCTGGAATTTGGAGGGATGGGAGGAGGGGGTGGGGCTTACTTGTT | 6mer | |||
| DOG | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAA | 6mer | |||
| DOG | TCATCTGGGAGCAGAAAACAGCAGGCAGCTGTT | 6mer | |||
| DOG | ACCTCTTAGACAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| DOG | CAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| DOG | CAGGTGGGAGAT | 7mer-A1 | |||
| PIG | TCATCTGGGAGCAGAAAACAGCAGGCAGCTGTT | 6mer | |||
| PIG | CAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| PIG | CAGGTGGGAGAT | 7mer-A1 | |||
| COW | TCATCTGGGAGCAGAAAACAGCAGGCAGCTGTT | 6mer | |||
| COW | CAGGTGGGAGATTATGATCAGA | 7mer-A1 | |||
| COW | CAGGTGGGAGAT | 7mer-A1 | |||
| MOUSE | CAGGTGGGAGAT | 7mer-A1 | |||
| Seed Matches to the miRNA miR-299-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GGUUUAC | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Rat (Rattus norvegicus) | HUMAN | CCAGTGACTAAAACCAACTTAAACCAGTAAGTGGAGAAATAACATGTT | 7mer-A1 |
| MARMOSET | CCAGTGACTAAAACCAACTTAAACCAGTAAGTGGAGAAATAACATGTT | 7mer-A1 | |||
| Seed Matches to the miRNA miR-326 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CUCUGGG | Conserved | Human (Homo sapiens) Chimp (Pan troglodytes) Cow (Bos taurus) | HUMAN | TCATGCCAGAGAACTTAAA | 7mer-A1 |
| HUMAN | GAAGGGCCAGAGAAGCCAGACCCAGTAAG | 7mer-A1 | |||
| HUMAN | GAAGGGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| HUMAN | GGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| HUMAN | GGCCAGAGAA | 7mer-A1 | |||
| MARMOSET | TCATGCCAGAGAACTTAAA | 7mer-A1 | |||
| MARMOSET | GAAGGGCCAGAGAAGCCAGACCCAGTAAG | 7mer-A1 | |||
| MARMOSET | GAAGGGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| MARMOSET | GGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| MARMOSET | GGCCAGAGAA | 7mer-A1 | |||
| DOG | GAAGGGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| DOG | GGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| DOG | GGCCAGAGAA | 7mer-A1 | |||
| PIG | GAAGGGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| PIG | GGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| PIG | GGCCAGAGAA | 7mer-A1 | |||
| COW | GGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| COW | GGCCAGAGAA | 7mer-A1 | |||
| MOUSE | GGCCAGAGAA | 7mer-A1 | |||
| Seed Matches to the miRNA miR-653-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UGAAACA | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | AATATTGTCAAGAGTTTCAGATAGAAAATGAAAA | 6mer |
| HUMAN | GTTTCAAGGTAAC | 7mer-A1 | |||
| MARMOSET | AATATTGTCAAGAGTTTCAGATAGAAAATGAAAA | 6mer | |||
| MARMOSET | GTTTCAAGGTAAC | 8mer | |||
| DOG | GTTTCAAGGTAAC | 7mer-A1 | |||
| Seed Matches to the miRNA miR-140-3p.2 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| ACCACAG | Broadly Conserved | Human (Homo sapiens) | HUMAN | GGATATGGTAGTGTGTGGTTCTCTTTTGGAATTTTTTTCAGGTGATTTAATA | 6mer |
| HUMAN | TAGTGTGTGGTTCTCT | 6mer | |||
| MARMOSET | GGATATGGTAGTGTGTGGTTCTCTTTTGGAATTTTTTTCAGGTGATTTAATA | 6mer | |||
| MARMOSET | TAGTGTGTGGTTCTCT | 6mer | |||
| DOG | GGATATGGTAGTGTGTGGTTCTCTTTTGGAATTTTTTTCAGGTGATTTAATA | 6mer | |||
| DOG | TAGTGTGTGGTTCTCT | 6mer | |||
| PIG | GGATATGGTAGTGTGTGGTTCTCTTTTGGAATTTTTTTCAGGTGATTTAATA | 6mer | |||
| PIG | TAGTGTGTGGTTCTCT | 6mer | |||
| COW | TAGTGTGTGGTTCTCT | 6mer | |||
| MOUSE | TAGTGTGTGGTTCTCT | 6mer | |||
| Seed Matches to the miRNA miR-208-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UAAGACG | Broadly Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | ATTTTGGGATGGTCTTAACAGGGAAGAGAGAGGGTGGGGGAGAAAATGTTTTTTTCTAAGATTTTCCACAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTAC | 7mer-A1 |
| HUMAN | TGGTCTTAACAGGGAAGAG | 7mer-A1 | |||
| HUMAN | GTCTTAG | 6mer | |||
| HUMAN | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACATGCAGGAACA | 7mer-A1 | |||
| HUMAN | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACA | 7mer-A1 | |||
| MARMOSET | ATTTTGGGATGGTCTTAACAGGGAAGAGAGAGGGTGGGGGAGAAAATGTTTTTTTCTAAGATTTTCCACAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTAC | 7mer-A1 | |||
| MARMOSET | TGGTCTTAACAGGGAAGAG | 7mer-A1 | |||
| MARMOSET | GTCTTAG | 6mer | |||
| MARMOSET | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACATGCAGGAACA | 7mer-A1 | |||
| MARMOSET | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACA | 7mer-A1 | |||
| DOG | TGGTCTTAACAGGGAAGAG | 7mer-A1 | |||
| DOG | TGTGTGGGTTTCTCTCTCCCCTCCCTTGGTCTTAATTCTTACA | 7mer-A1 | |||
| PIG | TGGTCTTAACAGGGAAGAG | 7mer-A1 | |||
| Seed Matches to the miRNA miR-302-3p/372-3p/373-3p/520-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AAGUGCU | Broadly Conserved | Human (Homo sapiens) | HUMAN | CCATGGCACTTT | 6mer |
| MARMOSET | CCATGGCACTTT | 6mer | |||
| Seed Matches to the miRNA miR-96-5p/1271-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UUGGCAC | Broadly Conserved | Human (Homo sapiens) | HUMAN | TGCCAAGGC | 7mer-m8 |
| HUMAN | CTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAG | 6mer | |||
| HUMAN | TTATCTGCATATGCCAAAAAA | 7mer-A1 | |||
| HUMAN | AGAGATGAGTTGGGATCAAGTGGATTGAGGAGGCTGTGCTGTGTGCCAAT | 7mer-m8 | |||
| HUMAN | TGCCAAT | 7mer-m8 | |||
| MARMOSET | TGCCAAGGC | 6mer | |||
| MARMOSET | CTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAG | 6mer | |||
| MARMOSET | TTATCTGCATATGCCAAAAAA | 7mer-A1 | |||
| MARMOSET | AGAGATGAGTTGGGATCAAGTGGATTGAGGAGGCTGTGCTGTGTGCCAAT | 7mer-m8 | |||
| MARMOSET | TGCCAAT | 7mer-m8 | |||
| DOG | TGCCAAT | 6mer | |||
| PIG | TGCCAAT | 6mer | |||
| COW | TGCCAAT | 6mer | |||
| MOUSE | TGCCAAT | 7mer-m8 | |||
| Seed Matches to the miRNA miR-192-5p/215-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UGACCUA | Broadly Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) | HUMAN | GAGAGACAACAAAGCGCTATTATCCTAAGGTCAAGA | 7mer-A1 |
| HUMAN | CTAAGGTCAA | 7mer-A1 | |||
| MARMOSET | GAGAGACAACAAAGCGCTATTATCCTAAGGTCAAGA | 7mer-A1 | |||
| MARMOSET | CTAAGGTCAA | 7mer-A1 | |||
| DOG | CTAAGGTCAA | 7mer-A1 | |||
| PIG | CTAAGGTCAA | 7mer-A1 | |||
| COW | CTAAGGTCAA | 7mer-A1 | |||
| Seed Matches to the miRNA miR-346 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GUCUGCC | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Chimp (Pan troglodytes) Dog (Canis lupus familiaris) Cow (Bos taurus) Rat (Rattus norvegicus) | HUMAN | TTACTAAACGCAGACGAA | 6mer |
| HUMAN | TTAATTGACAGCTGACCCAGGTGCTACACAGAAGTGGATTCAGTGAATCTAGGAAGACAGCAGCAGACAG | 7mer-A1 | |||
| HUMAN | GCAGACAG | 7mer-A1 | |||
| HUMAN | CTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAG | 7mer-m8 | |||
| HUMAN | ATCTTGTCTGAAGCTTTTGAGGGCAGACT | 7mer-m8 | |||
| HUMAN | AGCTTTTGAGGGCAGACT | 7mer-m8 | |||
| HUMAN | CAGCAGACA | 7mer-A1 | |||
| HUMAN | CAGCAGAC | 7mer-A1 | |||
| MARMOSET | TTACTAAACGCAGACGAA | 6mer | |||
| MARMOSET | TTAATTGACAGCTGACCCAGGTGCTACACAGAAGTGGATTCAGTGAATCTAGGAAGACAGCAGCAGACAG | 7mer-A1 | |||
| MARMOSET | GCAGACAG | 7mer-A1 | |||
| MARMOSET | CTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAG | 7mer-m8 | |||
| MARMOSET | ATCTTGTCTGAAGCTTTTGAGGGCAGACT | 7mer-m8 | |||
| MARMOSET | AGCTTTTGAGGGCAGACT | 7mer-m8 | |||
| MARMOSET | CAGCAGACA | 7mer-A1 | |||
| MARMOSET | CAGCAGAC | 7mer-A1 | |||
| DOG | GCAGACAG | 8mer | |||
| DOG | ATCTTGTCTGAAGCTTTTGAGGGCAGACT | 7mer-m8 | |||
| DOG | AGCTTTTGAGGGCAGACT | 7mer-m8 | |||
| DOG | CAGCAGAC | 6mer | |||
| PIG | GCAGACAG | 7mer-A1 | |||
| PIG | ATCTTGTCTGAAGCTTTTGAGGGCAGACT | 7mer-m8 | |||
| PIG | AGCTTTTGAGGGCAGACT | 7mer-m8 | |||
| COW | GCAGACAG | 8mer | |||
| COW | AGCTTTTGAGGGCAGACT | 7mer-m8 | |||
| MOUSE | GCAGACAG | 8mer | |||
| Seed Matches to the miRNA miR-33-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UGCAUUG | Broadly Conserved | Human (Homo sapiens) Chicken (Gallus gallus) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | ATTATGGGAAATGCAAAAGTTGTT | 7mer-A1 |
| HUMAN | TTTTTTTTTACAGACTTCACAGAGAATGCAGTTGTCTTGACTTCAGGTCTGTCTGTTCTGTTGGCAAGTAA | 6mer | |||
| HUMAN | AGAATGCAGTTGTCTTGAC | 6mer | |||
| HUMAN | AGAATGCAG | 6mer | |||
| HUMAN | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 6mer | |||
| HUMAN | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTT | 6mer | |||
| HUMAN | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 6mer | |||
| HUMAN | GCTGCTATTAGAATGCATT | 6mer | |||
| HUMAN | TGGGTGGGAATGCAAAAATTCTCTGCTAAGACTTTTTCAGGTGAACATAACAGACTTGGCCAAGCTAGCATCTTAGCGGAAGC | 7mer-A1 | |||
| MARMOSET | ATTATGGGAAATGCAAAAGTTGTT | 7mer-A1 | |||
| MARMOSET | TTTTTTTTTACAGACTTCACAGAGAATGCAGTTGTCTTGACTTCAGGTCTGTCTGTTCTGTTGGCAAGTAA | 6mer | |||
| MARMOSET | AGAATGCAGTTGTCTTGAC | 6mer | |||
| MARMOSET | AGAATGCAG | 6mer | |||
| MARMOSET | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 6mer | |||
| MARMOSET | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTT | 6mer | |||
| MARMOSET | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 6mer | |||
| MARMOSET | GCTGCTATTAGAATGCATT | 6mer | |||
| MARMOSET | TGGGTGGGAATGCAAAAATTCTCTGCTAAGACTTTTTCAGGTGAACATAACAGACTTGGCCAAGCTAGCATCTTAGCGGAAGC | 7mer-A1 | |||
| DOG | AGAATGCAGTTGTCTTGAC | 6mer | |||
| DOG | AGAATGCAG | 6mer | |||
| DOG | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTT | 6mer | |||
| DOG | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 6mer | |||
| DOG | GCTGCTATTAGAATGCATT | 6mer | |||
| PIG | AGAATGCAGTTGTCTTGAC | 6mer | |||
| PIG | AGAATGCAG | 6mer | |||
| PIG | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 6mer | |||
| PIG | GCTGCTATTAGAATGCATT | 6mer | |||
| COW | AGAATGCAGTTGTCTTGAC | 6mer | |||
| COW | AGAATGCAG | 6mer | |||
| COW | GCTGCTATTAGAATGCATT | 6mer | |||
| MOUSE | AGAATGCAG | 6mer | |||
| MOUSE | GCTGCTATTAGAATGCATT | 6mer | |||
| TURTLE | AGAATGCAG | 6mer | |||
| ALLIGATOR | AGAATGCAG | 6mer | |||
| Seed Matches to the miRNA miR-455-3p.2 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UGCAGUC | Broadly Conserved | Human (Homo sapiens) Mouse (Mus musculus) | HUMAN | AACTGCAAA | 7mer-A1 |
| MARMOSET | AACTGCAAA | 7mer-A1 | |||
| DOG | AACTGCAAA | 7mer-A1 | |||
| Seed Matches to the miRNA miR-205-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CCUUCAU | Broadly Conserved | Human (Homo sapiens) Mouse (Mus musculus) | HUMAN | CCAGTGCGATTTGGTGAAGGAAGCTAGGAAGAAGGAAGGAGCGCTAACGATTTGGTGGTGAAGCTAGGAAA | 7mer-A1 |
| HUMAN | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTCTGATGGTAGCTTTTGTATTATCAAGTAAGATTCT | 6mer | |||
| HUMAN | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| HUMAN | GTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| HUMAN | CCTGAAGG | 6mer | |||
| HUMAN | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 7mer-A1 | |||
| HUMAN | CCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAA | 7mer-A1 | |||
| HUMAN | TAAAGCCCAAATCTCAAGCGGTGCTTGAAGGGGAGGGAAAGGGGGAAAGCGGGCAACCA | 6mer | |||
| HUMAN | TTGAAGGGGAGGGAAA | 6mer | |||
| HUMAN | GATCTCCAATGCTCTTCAGTAGGGTCATGAAGGTTTTTCTTTTCCTGAGAAAACAACA | 7mer-m8 | |||
| MARMOSET | CCAGTGCGATTTGGTGAAGGAAGCTAGGAAGAAGGAAGGAGCGCTAACGATTTGGTGGTGAAGCTAGGAAA | 7mer-A1 | |||
| MARMOSET | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTCTGATGGTAGCTTTTGTATTATCAAGTAAGATTCT | 6mer | |||
| MARMOSET | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| MARMOSET | GTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| MARMOSET | CCTGAAGG | 6mer | |||
| MARMOSET | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 7mer-A1 | |||
| MARMOSET | CCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAA | 7mer-A1 | |||
| MARMOSET | TAAAGCCCAAATCTCAAGCGGTGCTTGAAGGGGAGGGAAAGGGGGAAAGCGGGCAACCA | 6mer | |||
| MARMOSET | TTGAAGGGGAGGGAAA | 6mer | |||
| MARMOSET | GATCTCCAATGCTCTTCAGTAGGGTCATGAAGGTTTTTCTTTTCCTGAGAAAACAACA | 7mer-m8 | |||
| DOG | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| DOG | GTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| DOG | CCTGAAGG | 6mer | |||
| DOG | CCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAA | 7mer-A1 | |||
| DOG | TTGAAGGGGAGGGAAA | 6mer | |||
| PIG | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| PIG | GTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| PIG | CCTGAAGG | 6mer | |||
| PIG | CCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAA | 7mer-A1 | |||
| PIG | TTGAAGGGGAGGGAAA | 6mer | |||
| COW | GTGGCTTAATGATCCTGAAGGGATTTCTTC | 6mer | |||
| COW | CCTGAAGG | 6mer | |||
| COW | TTGAAGGGGAGGGAAA | 6mer | |||
| MOUSE | CCTGAAGG | 7mer-A1 | |||
| Seed Matches to the miRNA miR-203a-3p.2 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UGAAAUG | Broadly Conserved | Human (Homo sapiens) | HUMAN | AATTTCAGCAAATCTGTAAGCAGTTTGTATGTTTAGTTGGGGTAATG | 6mer |
| HUMAN | AGTATTTCA | 6mer | |||
| HUMAN | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAACTTGCATCTGCA | 7mer-m8 | |||
| HUMAN | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAA | 7mer-m8 | |||
| HUMAN | TCCTGACCCCTTCCCTAGGGGATTTCAGGATT | 6mer | |||
| HUMAN | GGATTTCAGGATT | 6mer | |||
| HUMAN | TTTTAAAGAATTTTCCTTTGCAGAGGCATTTCATCCTTCATGAAGC | 7mer-m8 | |||
| HUMAN | CATTTCATCCTTCATGAAGC | 7mer-m8 | |||
| HUMAN | AGTATTGAATAGATTTCAGCTTTATGCTGGAGTAA | 6mer | |||
| MARMOSET | AATTTCAGCAAATCTGTAAGCAGTTTGTATGTTTAGTTGGGGTAATG | 6mer | |||
| MARMOSET | AGTATTTCA | 7mer-A1 | |||
| MARMOSET | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAACTTGCATCTGCA | 7mer-m8 | |||
| MARMOSET | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAA | 7mer-m8 | |||
| MARMOSET | TCCTGACCCCTTCCCTAGGGGATTTCAGGATT | 6mer | |||
| MARMOSET | GGATTTCAGGATT | 6mer | |||
| MARMOSET | TTTTAAAGAATTTTCCTTTGCAGAGGCATTTCATCCTTCATGAAGC | 7mer-m8 | |||
| MARMOSET | CATTTCATCCTTCATGAAGC | 7mer-m8 | |||
| MARMOSET | AGTATTGAATAGATTTCAGCTTTATGCTGGAGTAA | 6mer | |||
| DOG | TTATCAGAAGAGTTGCTTCATTTCATCTGGGAGCAGAAAACAGCAGGCAGCTGTTAACAGATAAGTTTAA | 7mer-m8 | |||
| DOG | GGATTTCAGGATT | 6mer | |||
| DOG | CATTTCATCCTTCATGAAGC | 7mer-m8 | |||
| Seed Matches to the miRNA let-7-5p/98-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GAGGUAG | Broadly Conserved | Human (Homo sapiens) | HUMAN | TGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGA | 6mer |
| HUMAN | TCATACCTCCATTGGGGAA | 6mer | |||
| MARMOSET | TGATAAGTAAAGGCAGAAAAGATTATATGTCATACCTCCATTGGGGAATAAGCATAACCCTGAGATTCTTACTACTGATGA | 6mer | |||
| MARMOSET | TCATACCTCCATTGGGGAA | 6mer | |||
| DOG | TCATACCTCCATTGGGGAA | 6mer | |||
| Seed Matches to the miRNA miR-199-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CCAGUGU | Broadly Conserved | Human (Homo sapiens) X. tropicalis (Xenopus tropicalis) Chicken (Gallus gallus) Rhesus (Macaca mulatta) Chimp (Pan troglodytes) Cow (Bos taurus) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | GAGCCACTGGGTGTACCAGTGCATT | 6mer |
| MARMOSET | GAGCCACTGGGTGTACCAGTGCATT | 6mer | |||
| Seed Matches to the miRNA miR-495-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AACAAAC | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) | HUMAN | TAACTGATTAAGAATTGTGATAGTTCAGCTTGAATGTCTCTTAGAGGGTGGGCTTTTGTTGATGAGGGAGGGGAAACTTTTTTTTT | 6mer |
| MARMOSET | TAACTGATTAAGAATTGTGATAGTTCAGCTTGAATGTCTCTTAGAGGGTGGGCTTTTGTTGATGAGGGAGGGGAAACTTTTTTTTT | 6mer | |||
| Seed Matches to the miRNA miR-483-3p.1 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| ACUCCUC | Conserved | Human (Homo sapiens) Mouse (Mus musculus) | HUMAN | ATTTTGGGATGGTCTTAACAGGGAAGAGAGAGGGTGGGGGAGAAAATGTTTTTTTCTAAGATTTTCCACAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTAC | 6mer |
| MARMOSET | ATTTTGGGATGGTCTTAACAGGGAAGAGAGAGGGTGGGGGAGAAAATGTTTTTTTCTAAGATTTTCCACAGATGCTATAGTACTATTGACAAACTGGGTTAGAGAAGGAGTGTAC | 6mer | |||
| Seed Matches to the miRNA miR-15-5p/16-5p/195-5p/424-5p/497-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AGCAGCA | Broadly Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) | HUMAN | GCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTAT | 6mer |
| HUMAN | TGGAGCTGCTTTT | 6mer | |||
| HUMAN | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 7mer-A1 | |||
| HUMAN | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTT | 7mer-A1 | |||
| HUMAN | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 7mer-A1 | |||
| HUMAN | GCTGCTATTAGAATGCATT | 7mer-A1 | |||
| MARMOSET | GCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTAT | 6mer | |||
| MARMOSET | TGGAGCTGCTTTT | 6mer | |||
| MARMOSET | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 7mer-A1 | |||
| MARMOSET | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTT | 7mer-A1 | |||
| MARMOSET | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 7mer-A1 | |||
| MARMOSET | GCTGCTATTAGAATGCATT | 7mer-A1 | |||
| DOG | TGGAGCTGCTTTT | 6mer | |||
| DOG | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTT | 8mer | |||
| DOG | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 8mer | |||
| DOG | GCTGCTATTAGAATGCATT | 8mer | |||
| PIG | TGGAGCTGCTTTT | 6mer | |||
| PIG | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 8mer | |||
| PIG | GCTGCTATTAGAATGCATT | 8mer | |||
| COW | GCTGCTATTAGAATGCATT | 7mer-A1 | |||
| MOUSE | GCTGCTATTAGAATGCATT | 8mer | |||
| Seed Matches to the miRNA miR-29-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AGCACCA | Broadly Conserved | Human (Homo sapiens) Chicken (Gallus gallus) Rhesus (Macaca mulatta) Cow (Bos taurus) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | TTAATTGACAGCTGACCCAGGTGCTACACAGAAGTGGATTCAGTGAATCTAGGAAGACAGCAGCAGACAG | 7mer-A1 |
| HUMAN | TAAAGCCCAAATCTCAAGCGGTGCTTGAAGGGGAGGGAAAGGGGGAAAGCGGGCAACCA | 6mer | |||
| MARMOSET | TTAATTGACAGCTGACCCAGGTGCTACACAGAAGTGGATTCAGTGAATCTAGGAAGACAGCAGCAGACAG | 7mer-A1 | |||
| MARMOSET | TAAAGCCCAAATCTCAAGCGGTGCTTGAAGGGGAGGGAAAGGGGGAAAGCGGGCAACCA | 6mer | |||
| Seed Matches to the miRNA miR-539-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UCAUACA | Conserved | Human (Homo sapiens) | HUMAN | AGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGCATACTCAAAATTTTTTTCCTGGAATTTGGAGGGATGGGAGGAGGGGGTGGGGCTTACTTGTT | 7mer-m8 |
| HUMAN | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 6mer | |||
| HUMAN | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTT | 6mer | |||
| HUMAN | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 6mer | |||
| HUMAN | TGAAACGACTGGAGTATGA | 6mer | |||
| HUMAN | CGACTGGAGTATGA | 6mer | |||
| MARMOSET | AGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGCATACTCAAAATTTTTTTCCTGGAATTTGGAGGGATGGGAGGAGGGGGTGGGGCTTACTTGTT | 7mer-m8 | |||
| MARMOSET | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 6mer | |||
| MARMOSET | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTT | 6mer | |||
| MARMOSET | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 6mer | |||
| MARMOSET | TGAAACGACTGGAGTATGA | 6mer | |||
| MARMOSET | CGACTGGAGTATGA | 6mer | |||
| DOG | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTT | 6mer | |||
| DOG | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 6mer | |||
| DOG | TGAAACGACTGGAGTATGA | 6mer | |||
| DOG | CGACTGGAGTATGA | 6mer | |||
| PIG | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 6mer | |||
| PIG | TGAAACGACTGGAGTATGA | 6mer | |||
| PIG | CGACTGGAGTATGA | 6mer | |||
| COW | TGAAACGACTGGAGTATGA | 6mer | |||
| COW | CGACTGGAGTATGA | 6mer | |||
| MOUSE | CGACTGGAGTATGA | 6mer | |||
| Seed Matches to the miRNA miR-143-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GAGAUGA | Broadly Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | TGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTC | 8mer |
| HUMAN | CAATGTCCATCTCAAAATACTGCTTTTACAAAAGCAGAATAAAA | 7mer-A1 | |||
| HUMAN | CCATCTCAAAATACTGCTTTTACAAAAGCAGAATAAAA | 7mer-A1 | |||
| MARMOSET | TGGAAGAGTATTCCCAGTTGAAGCTGAAAAGTACAGCACAGTGCAGCTTTGGTTCATATTCAGTCATCTCAGGAGAACTTCAGAAGAGCTTGAGTAGGCCAAATGTTGAAGTTAAGTTTTC | 8mer | |||
| MARMOSET | CAATGTCCATCTCAAAATACTGCTTTTACAAAAGCAGAATAAAA | 7mer-A1 | |||
| MARMOSET | CCATCTCAAAATACTGCTTTTACAAAAGCAGAATAAAA | 7mer-A1 | |||
| DOG | CCATCTCAAAATACTGCTTTTACAAAAGCAGAATAAAA | 7mer-A1 | |||
| Seed Matches to the miRNA miR-202-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UCCUAUG | Broadly Conserved | Human (Homo sapiens) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | GCAGCAGTTCGTGGTGAAGATAGGAA | 7mer-A1 |
| HUMAN | GCAGTTCGTGGTGAAGATAGGAA | 7mer-A1 | |||
| HUMAN | GTGAAGATAGGAA | 7mer-A1 | |||
| MARMOSET | GCAGCAGTTCGTGGTGAAGATAGGAA | 7mer-A1 | |||
| MARMOSET | GCAGTTCGTGGTGAAGATAGGAA | 7mer-A1 | |||
| MARMOSET | GTGAAGATAGGAA | 7mer-A1 | |||
| DOG | GCAGTTCGTGGTGAAGATAGGAA | 7mer-A1 | |||
| DOG | GTGAAGATAGGAA | 7mer-A1 | |||
| PIG | GTGAAGATAGGAA | 7mer-A1 | |||
| COW | GTGAAGATAGGAA | 7mer-A1 | |||
| Seed Matches to the miRNA miR-193-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| ACUGGCC | Broadly Conserved | Human (Homo sapiens) Chicken (Gallus gallus) Rhesus (Macaca mulatta) Cow (Bos taurus) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | TAGAGGATCCTAGACCAGCATGCCAGT | 6mer |
| MARMOSET | TAGAGGATCCTAGACCAGCATGCCAGT | 7mer-A1 | |||
| Seed Matches to the miRNA miR-383-5p.1 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GAUCAGA | Broadly Conserved | Human (Homo sapiens) Mouse (Mus musculus) | HUMAN | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 7mer-m8 |
| HUMAN | TGCAGTACTGTTCTGATC | 7mer-m8 | |||
| MARMOSET | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 7mer-m8 | |||
| MARMOSET | TGCAGTACTGTTCTGATC | 7mer-m8 | |||
| DOG | TGCAGTACTGTTCTGATC | 7mer-m8 | |||
| Seed Matches to the miRNA miR-503-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AGCAGCG | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | GCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTAT | 6mer |
| HUMAN | TGGAGCTGCTTTT | 6mer | |||
| HUMAN | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 8mer | |||
| HUMAN | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTT | 8mer | |||
| HUMAN | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 8mer | |||
| HUMAN | GCTGCTATTAGAATGCATT | 8mer | |||
| MARMOSET | GCTGTGCTGTTGGCACGAACACCTTCAGGGACTGGAGCTGCTTTTAT | 6mer | |||
| MARMOSET | TGGAGCTGCTTTT | 6mer | |||
| MARMOSET | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 8mer | |||
| MARMOSET | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTT | 8mer | |||
| MARMOSET | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 8mer | |||
| MARMOSET | GCTGCTATTAGAATGCATT | 8mer | |||
| DOG | TGGAGCTGCTTTT | 6mer | |||
| DOG | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTT | 7mer-A1 | |||
| DOG | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 7mer-A1 | |||
| DOG | GCTGCTATTAGAATGCATT | 7mer-A1 | |||
| PIG | TGGAGCTGCTTTT | 6mer | |||
| PIG | GCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTT | 7mer-A1 | |||
| PIG | GCTGCTATTAGAATGCATT | 7mer-A1 | |||
| COW | GCTGCTATTAGAATGCATT | 8mer | |||
| MOUSE | GCTGCTATTAGAATGCATT | 7mer-A1 | |||
| Seed Matches to the miRNA miR-491-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GUGGGGA | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) | HUMAN | TTTTCCCTAGCTTTTCCAGAAGCCTGTTAAAAGCAAGGTCTCCCCACAAGCAACTTCTCTGCCACATCGCCACCC | 8mer |
| HUMAN | CTCCCCACAAG | 8mer | |||
| MARMOSET | TTTTCCCTAGCTTTTCCAGAAGCCTGTTAAAAGCAAGGTCTCCCCACAAGCAACTTCTCTGCCACATCGCCACCC | 8mer | |||
| MARMOSET | CTCCCCACAAG | 8mer | |||
| DOG | CTCCCCACAAG | 8mer | |||
| PIG | CTCCCCACAAG | 8mer | |||
| COW | CTCCCCACAAG | 8mer | |||
| MOUSE | CTCCCCACAAG | 8mer | |||
| Seed Matches to the miRNA miR-490-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AACCUGG | Broadly Conserved | Human (Homo sapiens) Chicken (Gallus gallus) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | TTGTTTTCTCAGGTTTTGCTTTTTGGCCTTT | 6mer |
| HUMAN | TTGTTTTCTCAGGTTTTGCTTTTT | 6mer | |||
| HUMAN | TCTCAGGTTTTGCTTTT | 6mer | |||
| HUMAN | CAGGTTTTGCTTTT | 6mer | |||
| HUMAN | CAGGTTTTGCTTT | 6mer | |||
| MARMOSET | TTGTTTTCTCAGGTTTTGCTTTTTGGCCTTT | 6mer | |||
| MARMOSET | TTGTTTTCTCAGGTTTTGCTTTTT | 6mer | |||
| MARMOSET | TCTCAGGTTTTGCTTTT | 6mer | |||
| MARMOSET | CAGGTTTTGCTTTT | 6mer | |||
| MARMOSET | CAGGTTTTGCTTT | 6mer | |||
| DOG | TTGTTTTCTCAGGTTTTGCTTTTT | 6mer | |||
| DOG | TCTCAGGTTTTGCTTTT | 6mer | |||
| DOG | CAGGTTTTGCTTTT | 6mer | |||
| DOG | CAGGTTTTGCTTT | 6mer | |||
| PIG | TTGTTTTCTCAGGTTTTGCTTTTT | 6mer | |||
| PIG | TCTCAGGTTTTGCTTTT | 6mer | |||
| PIG | CAGGTTTTGCTTTT | 6mer | |||
| PIG | CAGGTTTTGCTTT | 6mer | |||
| COW | TTGTTTTCTCAGGTTTTGCTTTTT | 6mer | |||
| COW | TCTCAGGTTTTGCTTTT | 6mer | |||
| COW | CAGGTTTTGCTTTT | 6mer | |||
| COW | CAGGTTTTGCTTT | 6mer | |||
| MOUSE | TTGTTTTCTCAGGTTTTGCTTTTT | 6mer | |||
| MOUSE | TCTCAGGTTTTGCTTTT | 6mer | |||
| MOUSE | CAGGTTTTGCTTTT | 6mer | |||
| MOUSE | CAGGTTTTGCTTT | 6mer | |||
| TURTLE | TCTCAGGTTTTGCTTTT | 6mer | |||
| TURTLE | CAGGTTTTGCTTTT | 6mer | |||
| TURTLE | CAGGTTTTGCTTT | 6mer | |||
| ALLIGATOR | TCTCAGGTTTTGCTTTT | 6mer | |||
| ALLIGATOR | CAGGTTTTGCTTTT | 6mer | |||
| ALLIGATOR | CAGGTTTTGCTTT | 6mer | |||
| LIZARD | TCTCAGGTTTTGCTTTT | 6mer | |||
| LIZARD | CAGGTTTTGCTTTT | 6mer | |||
| LIZARD | CAGGTTTTGCTTT | 6mer | |||
| SNAKE | TCTCAGGTTTTGCTTTT | 6mer | |||
| SNAKE | CAGGTTTTGCTTTT | 6mer | |||
| SNAKE | CAGGTTTTGCTTT | 6mer | |||
| X.TROPICALIS | CAGGTTTTGCTTTT | 6mer | |||
| X.TROPICALIS | CAGGTTTTGCTTT | 6mer | |||
| SHARK | CAGGTTTTGCTTTT | 6mer | |||
| SHARK | CAGGTTTTGCTTT | 6mer | |||
| OPOSSUM | CAGGTTTTGCTTTT | 6mer | |||
| OPOSSUM | CAGGTTTTGCTTT | 6mer | |||
| SPOTTEDGAR | CAGGTTTTGCTTTT | 7mer-m8 | |||
| SPOTTEDGAR | CAGGTTTTGCTTT | 7mer-m8 | |||
| FUGU | CAGGTTTTGCTTTT | 7mer-m8 | |||
| FUGU | CAGGTTTTGCTTT | 7mer-m8 | |||
| NILETILAPIA | CAGGTTTTGCTTTT | 7mer-m8 | |||
| NILETILAPIA | CAGGTTTTGCTTT | 7mer-m8 | |||
| STICKLEBACK | CAGGTTTTGCTTT | 7mer-m8 | |||
| MEDAKA | CAGGTTTTGCTTT | 7mer-m8 | |||
| ZEBRAFISH | CAGGTTTTGCTTT | 6mer | |||
| Seed Matches to the miRNA miR-876-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GGAUUUC | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) | HUMAN | AAGGTGATTAAAAGACCTTGAAATCCATGACGCA | 8mer |
| HUMAN | GAGTGGTTGGTAAAAATCCGTGAGGTCGGCAATATGTTGTTTTTCTGGAACTT | 6mer | |||
| HUMAN | AAACAAGAAAATCCA | 7mer-A1 | |||
| HUMAN | AAGAAAATCCA | 7mer-A1 | |||
| HUMAN | AAATCCA | 7mer-A1 | |||
| HUMAN | ACTCCTGGTTTCCAGGACGGGGTTCAAATCCCTGCGGC | 6mer | |||
| HUMAN | GGGTTCAAATCC | 6mer | |||
| MARMOSET | AAGGTGATTAAAAGACCTTGAAATCCATGACGCA | 8mer | |||
| MARMOSET | GAGTGGTTGGTAAAAATCCGTGAGGTCGGCAATATGTTGTTTTTCTGGAACTT | 6mer | |||
| MARMOSET | AAACAAGAAAATCCA | 7mer-A1 | |||
| MARMOSET | AAGAAAATCCA | 7mer-A1 | |||
| MARMOSET | AAATCCA | 7mer-A1 | |||
| MARMOSET | ACTCCTGGTTTCCAGGACGGGGTTCAAATCCCTGCGGC | 6mer | |||
| MARMOSET | GGGTTCAAATCC | 6mer | |||
| DOG | AAGAAAATCCA | 7mer-A1 | |||
| DOG | AAATCCA | 7mer-A1 | |||
| DOG | GGGTTCAAATCC | 6mer | |||
| PIG | AAGAAAATCCA | 7mer-A1 | |||
| PIG | AAATCCA | 7mer-A1 | |||
| PIG | GGGTTCAAATCC | 6mer | |||
| COW | AAGAAAATCCA | 7mer-A1 | |||
| COW | AAATCCA | 7mer-A1 | |||
| COW | GGGTTCAAATCC | 6mer | |||
| MOUSE | AAATCCA | 8mer | |||
| Seed Matches to the miRNA miR-188-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AUCCCUU | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTCTGATGGTAGCTTTTGTATTATCAAGTAAGATTCT | 7mer-m8 |
| HUMAN | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTC | 7mer-m8 | |||
| HUMAN | GTGGCTTAATGATCCTGAAGGGATTTCTTC | 7mer-m8 | |||
| HUMAN | TATTGCATGTTAGGGATAAGTG | 7mer-A1 | |||
| HUMAN | AGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGCATACTCAAAATTTTTTTCCTGGAATTTGGAGGGATGGGAGGAGGGGGTGGGGCTTACTTGTT | 6mer | |||
| MARMOSET | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTCTGATGGTAGCTTTTGTATTATCAAGTAAGATTCT | 7mer-m8 | |||
| MARMOSET | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTC | 7mer-m8 | |||
| MARMOSET | GTGGCTTAATGATCCTGAAGGGATTTCTTC | 7mer-m8 | |||
| MARMOSET | TATTGCATGTTAGGGATAAGTG | 7mer-A1 | |||
| MARMOSET | AGTGAGTGTATGAGACCTTGCAGTGAGTTTATCAGCATACTCAAAATTTTTTTCCTGGAATTTGGAGGGATGGGAGGAGGGGGTGGGGCTTACTTGTT | 6mer | |||
| DOG | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTC | 7mer-m8 | |||
| DOG | GTGGCTTAATGATCCTGAAGGGATTTCTTC | 7mer-m8 | |||
| DOG | TATTGCATGTTAGGGATAAGTG | 7mer-A1 | |||
| PIG | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTC | 7mer-m8 | |||
| PIG | GTGGCTTAATGATCCTGAAGGGATTTCTTC | 7mer-m8 | |||
| PIG | TATTGCATGTTAGGGATAAGTG | 7mer-A1 | |||
| COW | GTGGCTTAATGATCCTGAAGGGATTTCTTC | 7mer-m8 | |||
| Seed Matches to the miRNA miR-668-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GUCACUC | Conserved | Human (Homo sapiens) Mouse (Mus musculus) | HUMAN | ACTGAAGCCTTTAGTCTTTTCCAGATGCAACCTTAAAATCAGTGACAAGAAACA | 7mer-A1 |
| HUMAN | CCTTAAAATCAGTGACAAGAAA | 7mer-A1 | |||
| HUMAN | TTAAAATCAGTGACAAGAAA | 7mer-A1 | |||
| HUMAN | CCAGTGACTAAAACCAACTTAAACCAGTAAGTGGAGAAATAACATGTT | 6mer | |||
| MARMOSET | ACTGAAGCCTTTAGTCTTTTCCAGATGCAACCTTAAAATCAGTGACAAGAAACA | 7mer-A1 | |||
| MARMOSET | CCTTAAAATCAGTGACAAGAAA | 7mer-A1 | |||
| MARMOSET | TTAAAATCAGTGACAAGAAA | 7mer-A1 | |||
| MARMOSET | CCAGTGACTAAAACCAACTTAAACCAGTAAGTGGAGAAATAACATGTT | 6mer | |||
| DOG | CCTTAAAATCAGTGACAAGAAA | 7mer-A1 | |||
| DOG | TTAAAATCAGTGACAAGAAA | 7mer-A1 | |||
| PIG | TTAAAATCAGTGACAAGAAA | 7mer-A1 | |||
| COW | TTAAAATCAGTGACAAGAAA | 7mer-A1 | |||
| Seed Matches to the miRNA miR-655-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UAAUACA | Conserved | Human (Homo sapiens) | HUMAN | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTCTGATGGTAGCTTTTGTATTATCAAGTAAGATTCT | 7mer-m8 |
| MARMOSET | CAGAGCAAAGGAAGTGGCTTAATGATCCTGAAGGGATTTCTTCTGATGGTAGCTTTTGTATTATCAAGTAAGATTCT | 7mer-m8 | |||
| Seed Matches to the miRNA miR-144-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| ACAGUAU | Broadly Conserved | Human (Homo sapiens) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | TAATTTGATACTGT | 8mer |
| HUMAN | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 6mer | |||
| HUMAN | TGCAGTACTGTTCTGATC | 6mer | |||
| HUMAN | TGCAGTACTGTTCTGA | 6mer | |||
| HUMAN | CAGTACTGTTCTGA | 6mer | |||
| HUMAN | CAGTACTGTTC | 6mer | |||
| MARMOSET | TAATTTGATACTGT | 7mer-m8 | |||
| MARMOSET | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 6mer | |||
| MARMOSET | TGCAGTACTGTTCTGATC | 6mer | |||
| MARMOSET | TGCAGTACTGTTCTGA | 6mer | |||
| MARMOSET | CAGTACTGTTCTGA | 6mer | |||
| MARMOSET | CAGTACTGTTC | 6mer | |||
| DOG | TGCAGTACTGTTCTGATC | 6mer | |||
| DOG | TGCAGTACTGTTCTGA | 6mer | |||
| DOG | CAGTACTGTTCTGA | 6mer | |||
| DOG | CAGTACTGTTC | 6mer | |||
| PIG | TGCAGTACTGTTCTGA | 6mer | |||
| PIG | CAGTACTGTTCTGA | 6mer | |||
| PIG | CAGTACTGTTC | 6mer | |||
| COW | CAGTACTGTTCTGA | 6mer | |||
| COW | CAGTACTGTTC | 6mer | |||
| MOUSE | CAGTACTGTTC | 6mer | |||
| Seed Matches to the miRNA miR-874-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UGCCCUG | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | TAGAAGGGCA | 7mer-A1 |
| HUMAN | CTAAGGGCAAAATGT | 7mer-A1 | |||
| HUMAN | CTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAG | 6mer | |||
| HUMAN | ATCTTGTCTGAAGCTTTTGAGGGCAGACT | 6mer | |||
| HUMAN | AGCTTTTGAGGGCAGACT | 6mer | |||
| MARMOSET | TAGAAGGGCA | 6mer | |||
| MARMOSET | CTAAGGGCAAAATGT | 7mer-A1 | |||
| MARMOSET | CTCATGAATCTTGTCTGAAGCTTTTGAGGGCAGACTGCCAAGTCCTGGAG | 6mer | |||
| MARMOSET | ATCTTGTCTGAAGCTTTTGAGGGCAGACT | 6mer | |||
| MARMOSET | AGCTTTTGAGGGCAGACT | 6mer | |||
| DOG | ATCTTGTCTGAAGCTTTTGAGGGCAGACT | 6mer | |||
| DOG | AGCTTTTGAGGGCAGACT | 6mer | |||
| PIG | ATCTTGTCTGAAGCTTTTGAGGGCAGACT | 6mer | |||
| PIG | AGCTTTTGAGGGCAGACT | 6mer | |||
| COW | AGCTTTTGAGGGCAGACT | 6mer | |||
| Seed Matches to the miRNA miR-219-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GAUUGUC | Broadly Conserved | Human (Homo sapiens) Chimp (Pan troglodytes) Dog (Canis lupus familiaris) Cow (Bos taurus) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | AGTTTGCATGTTAACTTTAAATGCTTACAATCTTA | 6mer |
| MARMOSET | AGTTTGCATGTTAACTTTAAATGCTTACAATCTTA | 6mer | |||
| Seed Matches to the miRNA miR-299-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AUGUGGG | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | TTTTCCCTAGCTTTTCCAGAAGCCTGTTAAAAGCAAGGTCTCCCCACAAGCAACTTCTCTGCCACATCGCCACCC | 6mer |
| HUMAN | CTCTGCCACATCGCCAC | 6mer | |||
| HUMAN | CTCTGCCACATCG | 6mer | |||
| MARMOSET | TTTTCCCTAGCTTTTCCAGAAGCCTGTTAAAAGCAAGGTCTCCCCACAAGCAACTTCTCTGCCACATCGCCACCC | 6mer | |||
| MARMOSET | CTCTGCCACATCGCCAC | 6mer | |||
| MARMOSET | CTCTGCCACATCG | 6mer | |||
| DOG | CTCTGCCACATCGCCAC | 6mer | |||
| DOG | CTCTGCCACATCG | 6mer | |||
| PIG | CTCTGCCACATCG | 6mer | |||
| COW | CTCTGCCACATCG | 6mer | |||
| MOUSE | CTCTGCCACATCG | 6mer | |||
| Seed Matches to the miRNA miR-101-3p.1 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| ACAGUAC | Broadly Conserved | Human (Homo sapiens) Mouse (Mus musculus) | HUMAN | TAATTTGATACTGT | 7mer-A1 |
| HUMAN | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 7mer-m8 | |||
| HUMAN | TGCAGTACTGTTCTGATC | 7mer-m8 | |||
| HUMAN | TGCAGTACTGTTCTGA | 7mer-m8 | |||
| HUMAN | CAGTACTGTTCTGA | 7mer-m8 | |||
| HUMAN | CAGTACTGTTC | 7mer-m8 | |||
| MARMOSET | TAATTTGATACTGT | 6mer | |||
| MARMOSET | ATGCAGTACTGTTCTGATCCCGCTGCTATTAGAATGCATTGTGAAACGACTGGAGTATGATTAAAAGTTGTGTTCCCCAATGCTTGGAGTAGTGATTGTTGAAGGAAAAAA | 7mer-m8 | |||
| MARMOSET | TGCAGTACTGTTCTGATC | 7mer-m8 | |||
| MARMOSET | TGCAGTACTGTTCTGA | 7mer-m8 | |||
| MARMOSET | CAGTACTGTTCTGA | 7mer-m8 | |||
| MARMOSET | CAGTACTGTTC | 7mer-m8 | |||
| DOG | TGCAGTACTGTTCTGATC | 7mer-m8 | |||
| DOG | TGCAGTACTGTTCTGA | 7mer-m8 | |||
| DOG | CAGTACTGTTCTGA | 7mer-m8 | |||
| DOG | CAGTACTGTTC | 7mer-m8 | |||
| PIG | TGCAGTACTGTTCTGA | 7mer-m8 | |||
| PIG | CAGTACTGTTCTGA | 7mer-m8 | |||
| PIG | CAGTACTGTTC | 7mer-m8 | |||
| COW | CAGTACTGTTCTGA | 7mer-m8 | |||
| COW | CAGTACTGTTC | 7mer-m8 | |||
| MOUSE | CAGTACTGTTC | 7mer-m8 | |||
| Seed Matches to the miRNA miR-154-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AGGUUAU | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | TAACCTCTTAGACAGGTGGGAGATTATGATCAGAGTAAAAGGTAATTACACATTTTATTTCCAGAAAGTCAGG | 7mer-m8 |
| MARMOSET | TAACCTCTTAGACAGGTGGGAGATTATGATCAGAGTAAAAGGTAATTACACATTTTATTTCCAGAAAGTCAGG | 6mer | |||
| Seed Matches to the miRNA miR-3064-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CUGGCUG | Conserved | Human (Homo sapiens) | HUMAN | AGCCAGCGCAGGG | 7mer-m8 |
| HUMAN | GAAGGGCCAGAGAAGCCAGACCCAGTAAG | 7mer-A1 | |||
| HUMAN | GAAGGGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| HUMAN | GGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| MARMOSET | AGCCAGCGCAGGG | 6mer | |||
| MARMOSET | GAAGGGCCAGAGAAGCCAGACCCAGTAAG | 7mer-A1 | |||
| MARMOSET | GAAGGGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| MARMOSET | GGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| DOG | GAAGGGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| DOG | GGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| PIG | GAAGGGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| PIG | GGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| COW | GGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| Seed Matches to the miRNA miR-193a-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GGGUCUU | Broadly Conserved | Human (Homo sapiens) | HUMAN | GAAGGGCCAGAGAAGCCAGACCCAGTAAG | 7mer-A1 |
| HUMAN | CTAGCACAGACCCTTCACCCCTCACCTCGATGCAGCC | 6mer | |||
| HUMAN | CAGACCCTTCACCCCTCACCTCGATGC | 6mer | |||
| HUMAN | CAGACCCTTCACCCCTCACCT | 6mer | |||
| MARMOSET | GAAGGGCCAGAGAAGCCAGACCCAGTAAG | 7mer-A1 | |||
| MARMOSET | CTAGCACAGACCCTTCACCCCTCACCTCGATGCAGCC | 6mer | |||
| MARMOSET | CAGACCCTTCACCCCTCACCTCGATGC | 6mer | |||
| MARMOSET | CAGACCCTTCACCCCTCACCT | 6mer | |||
| DOG | CAGACCCTTCACCCCTCACCTCGATGC | 6mer | |||
| DOG | CAGACCCTTCACCCCTCACCT | 6mer | |||
| PIG | CAGACCCTTCACCCCTCACCTCGATGC | 6mer | |||
| PIG | CAGACCCTTCACCCCTCACCT | 6mer | |||
| COW | CAGACCCTTCACCCCTCACCTCGATGC | 6mer | |||
| COW | CAGACCCTTCACCCCTCACCT | 6mer | |||
| MOUSE | CAGACCCTTCACCCCTCACCT | 6mer | |||
| Seed Matches to the miRNA miR-485-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| GAGGCUG | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Rat (Rattus norvegicus) | HUMAN | CTTAAAAGCCTCTAAAGTGAT | 6mer |
| HUMAN | GTGTCAGCCTCACCT | 8mer | |||
| HUMAN | GTGTCAGCCTC | 8mer | |||
| MARMOSET | CTTAAAAGCCTCTAAAGTGAT | 6mer | |||
| MARMOSET | GTGTCAGCCTCACCT | 8mer | |||
| MARMOSET | GTGTCAGCCTC | 8mer | |||
| DOG | GTGTCAGCCTC | 7mer-m8 | |||
| PIG | GTGTCAGCCTC | 8mer | |||
| Seed Matches to the miRNA miR-375 | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UUGUUCG | Broadly Conserved | Human (Homo sapiens) X. tropicalis (Xenopus tropicalis) Chicken (Gallus gallus) Rhesus (Macaca mulatta) Chimp (Pan troglodytes) Dog (Canis lupus familiaris) | HUMAN | AACAGGTGAACAAGCTTTTTCTGTATTTACAT | 6mer |
| MARMOSET | AACAGGTGAACAAGCTTTTTCTGTATTTACAT | 6mer | |||
| Seed Matches to the miRNA miR-141-3p/200a-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AACACUG | Broadly Conserved | Human (Homo sapiens) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | CCAGTGTTTG | 7mer-m8 |
| HUMAN | AGTGTTGGGGCAATCTTGGGGGG | 7mer-m8 | |||
| HUMAN | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAGTTTTAAGCAGTCGT | 6mer | |||
| HUMAN | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 6mer | |||
| HUMAN | AAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 6mer | |||
| HUMAN | AGGCTGAGTGTTGAGGAAAT | 6mer | |||
| MARMOSET | CCAGTGTTTG | 7mer-m8 | |||
| MARMOSET | AGTGTTGGGGCAATCTTGGGGGG | 6mer | |||
| MARMOSET | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAGTTTTAAGCAGTCGT | 6mer | |||
| MARMOSET | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 6mer | |||
| MARMOSET | AAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 6mer | |||
| MARMOSET | AGGCTGAGTGTTGAGGAAAT | 6mer | |||
| DOG | TCCAGCTGAGTGATAAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 6mer | |||
| DOG | AAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 6mer | |||
| DOG | AGGCTGAGTGTTGAGGAAAT | 6mer | |||
| PIG | AAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 6mer | |||
| PIG | AGGCTGAGTGTTGAGGAAAT | 6mer | |||
| COW | AAAGGCTGAGTGTTGAGGAAATTTCTGCAG | 6mer | |||
| COW | AGGCTGAGTGTTGAGGAAAT | 6mer | |||
| MOUSE | AGGCTGAGTGTTGAGGAAAT | 6mer | |||
| Seed Matches to the miRNA miR-532-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AUGCCUU | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) | HUMAN | AGGCATTGAGG | 6mer |
| HUMAN | TCACTCAGAGGCATTTGCATCT | 6mer | |||
| HUMAN | TTTTAAAGAATTTTCCTTTGCAGAGGCATTTCATCCTTCATGAAGC | 6mer | |||
| MARMOSET | AGGCATTGAGG | 6mer | |||
| MARMOSET | TCACTCAGAGGCATTTGCATCT | 6mer | |||
| MARMOSET | TTTTAAAGAATTTTCCTTTGCAGAGGCATTTCATCCTTCATGAAGC | 6mer | |||
| Seed Matches to the miRNA miR-186-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| AAAGAAU | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Mouse (Mus musculus) Rat (Rattus norvegicus) Opossum (Monodelphis domestica) | HUMAN | AGTTCTTTT | 6mer |
| HUMAN | AAACCAAACATTCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCA | 6mer | |||
| HUMAN | TCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCA | 6mer | |||
| HUMAN | TTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTA | 6mer | |||
| HUMAN | CTAGTTCTTTCAGATG | 6mer | |||
| HUMAN | GATCTCCAATGCTCTTCAGTAGGGTCATGAAGGTTTTTCTTTTCCTGAGAAAACAACA | 6mer | |||
| HUMAN | AAGGTTTTTCTTTTCCTGAGAAAACAA | 6mer | |||
| HUMAN | AAGGTTTTTCTTTTCCTGAGA | 6mer | |||
| HUMAN | TTTTCTTTTCCTGAGA | 6mer | |||
| HUMAN | TTTTCTTTT | 6mer | |||
| MARMOSET | AGTTCTTTT | 6mer | |||
| MARMOSET | AAACCAAACATTCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCA | 6mer | |||
| MARMOSET | TCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCA | 6mer | |||
| MARMOSET | TTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTA | 6mer | |||
| MARMOSET | CTAGTTCTTTCAGATG | 6mer | |||
| MARMOSET | GATCTCCAATGCTCTTCAGTAGGGTCATGAAGGTTTTTCTTTTCCTGAGAAAACAACA | 6mer | |||
| MARMOSET | AAGGTTTTTCTTTTCCTGAGAAAACAA | 6mer | |||
| MARMOSET | AAGGTTTTTCTTTTCCTGAGA | 6mer | |||
| MARMOSET | TTTTCTTTTCCTGAGA | 6mer | |||
| MARMOSET | TTTTCTTTT | 6mer | |||
| DOG | AGTTCTTTT | 6mer | |||
| DOG | TCCATTTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTATTCTTCAGACTATAGAAGGAGCTTCCAGTTGAATTCA | 6mer | |||
| DOG | TTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTA | 6mer | |||
| DOG | CTAGTTCTTTCAGATG | 6mer | |||
| DOG | AAGGTTTTTCTTTTCCTGAGAAAACAA | 6mer | |||
| DOG | AAGGTTTTTCTTTTCCTGAGA | 6mer | |||
| DOG | TTTTCTTTTCCTGAGA | 6mer | |||
| DOG | TTTTCTTTT | 6mer | |||
| PIG | AGTTCTTTT | 6mer | |||
| PIG | TTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTA | 6mer | |||
| PIG | CTAGTTCTTTCAGATG | 6mer | |||
| PIG | AAGGTTTTTCTTTTCCTGAGAAAACAA | 6mer | |||
| PIG | AAGGTTTTTCTTTTCCTGAGA | 6mer | |||
| PIG | TTTTCTTTTCCTGAGA | 6mer | |||
| PIG | TTTTCTTTT | 6mer | |||
| COW | AGTTCTTTT | 6mer | |||
| COW | TTTAAATGTGGGGATTGGGAACCACTAGTTCTTTCAGATGGTA | 6mer | |||
| COW | CTAGTTCTTTCAGATG | 6mer | |||
| COW | AAGGTTTTTCTTTTCCTGAGAAAACAA | 6mer | |||
| COW | AAGGTTTTTCTTTTCCTGAGA | 6mer | |||
| COW | TTTTCTTTTCCTGAGA | 6mer | |||
| COW | TTTTCTTTT | 6mer | |||
| MOUSE | AGTTCTTTT | 6mer | |||
| MOUSE | CTAGTTCTTTCAGATG | 6mer | |||
| MOUSE | AAGGTTTTTCTTTTCCTGAGAAAACAA | 6mer | |||
| MOUSE | AAGGTTTTTCTTTTCCTGAGA | 6mer | |||
| MOUSE | TTTTCTTTTCCTGAGA | 6mer | |||
| MOUSE | TTTTCTTTT | 6mer | |||
| TURTLE | AAGGTTTTTCTTTTCCTGAGA | 6mer | |||
| TURTLE | TTTTCTTTTCCTGAGA | 6mer | |||
| TURTLE | TTTTCTTTT | 6mer | |||
| ALLIGATOR | TTTTCTTTTCCTGAGA | 6mer | |||
| ALLIGATOR | TTTTCTTTT | 6mer | |||
| LIZARD | TTTTCTTTTCCTGAGA | 6mer | |||
| LIZARD | TTTTCTTTT | 6mer | |||
| SNAKE | TTTTCTTTTCCTGAGA | 6mer | |||
| SNAKE | TTTTCTTTT | 6mer | |||
| X.TROPICALIS | TTTTCTTTT | 6mer | |||
| SHARK | TTTTCTTTT | 6mer | |||
| OPOSSUM | TTTTCTTTT | 6mer | |||
| SPOTTEDGAR | TTTTCTTTT | 6mer | |||
| FUGU | TTTTCTTTT | 6mer | |||
| NILETILAPIA | TTTTCTTTT | 6mer | |||
| STICKLEBACK | TTTTCTTTT | 6mer | |||
| MEDAKA | TTTTCTTTT | 6mer | |||
| ZEBRAFISH | TTTTCTTTT | 6mer | |||
| Seed Matches to the miRNA miR-328-3p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| UGGCCCU | Conserved | Human (Homo sapiens) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | GAAGGGCCAGAGAAGCCAGACCCAGTAAG | 7mer-m8 |
| HUMAN | GAAGGGCCAGAGAAGCCAGACC | 7mer-m8 | |||
| MARMOSET | GAAGGGCCAGAGAAGCCAGACCCAGTAAG | 7mer-m8 | |||
| MARMOSET | GAAGGGCCAGAGAAGCCAGACC | 7mer-m8 | |||
| DOG | GAAGGGCCAGAGAAGCCAGACC | 7mer-m8 | |||
| PIG | GAAGGGCCAGAGAAGCCAGACC | 7mer-m8 | |||
| Seed Matches to the miRNA miR-149-5p | |||||
|---|---|---|---|---|---|
| Seed | Conservation | Species | Matches | ||
| Sequence | Motif | Type | |||
| CUGGCUC | Conserved | Human (Homo sapiens) Rhesus (Macaca mulatta) Cow (Bos taurus) Mouse (Mus musculus) Rat (Rattus norvegicus) | HUMAN | AGCCAGCGCAGGG | 6mer |
| HUMAN | GAAGGGCCAGAGAAGCCAGACCCAGTAAG | 7mer-A1 | |||
| HUMAN | GAAGGGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| HUMAN | GGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| MARMOSET | AGCCAGCGCAGGG | 7mer-m8 | |||
| MARMOSET | GAAGGGCCAGAGAAGCCAGACCCAGTAAG | 7mer-A1 | |||
| MARMOSET | GAAGGGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| MARMOSET | GGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| DOG | GAAGGGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| DOG | GGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| PIG | GAAGGGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| PIG | GGCCAGAGAAGCCAGACC | 7mer-A1 | |||
| COW | GGCCAGAGAAGCCAGACC | 7mer-A1 | |||