{"text_format":"3","workbook":"xls","n_sheets":1,"sheets":["Subcellular localization"],"read":"whole","date_system":"1900","formulas":"cached_only"}

{"sheet":"Subcellular localization","index":0,"n_rows":56,"n_cols":12,"rows_kept":56,"merged":[[1,0,2,0],[1,1,2,1],[1,2,1,3],[1,4,1,5],[1,6,1,7],[1,8,1,9],[4,0,5,0],[6,0,9,0],[10,0,12,0],[14,0,15,0],[16,0,18,0],[21,0,23,0],[34,0,35,0],[36,0,44,0],[45,0,47,0],[48,0,49,0]],"flags":["formulas_cached_only"]}
["Table S4. Subcellular localization of N. oceanica IMET1 genes related to biophysical CCM, the C4-like cycle, the photorespiratory metabolism, the THF cycle and the urea cycle. The analysis was based on predictions from various computational programs (Methods). Abbreviations: Y, Yes; -, not detected; C, chloroplast; M, mitochondria; O, other; SP, secretory pathway; P, peroxisome. "]
["Gene name","Gene ID","SignalP",null,"ChloroP",null,"Mitoprot",null,"HECTAR",null,"Homolog","Sum Prediction"]
[null,null,"SP","Score","CTP","Score","MTP","Probability","HCT","Score"]
["Biophysical CCM"]
["BCT","s007.g19",null,0.998,"Y",0.532,"Y",{"v":0.9819,"d":"0.982"},"SP",0.785,null,"C"]
[null,"s043.g1855",null,0.992,"Y",0.565,"-",{"v":0.5959,"d":"0.596"},"SP",{"v":0.4991,"d":"0.499"},null,"C"]
[null,"s043.g2018","-",0.027,"Y",0.503,"Y",{"v":0.7424,"d":"0.742"},"-",{"v":0.4104,"d":"0.410"},null,"O"]
[null,"s066.g2209",null,0.105,"-",0.485,"Y",{"v":0.9988,"d":"0.999"},"-",{"v":0.8124,"d":"0.812"},null,"M"]
[null,"s140.g4812",null,0.972,"Y",0.534,"-",{"v":0.3839,"d":"0.384"},"SP",{"v":0.6249,"d":"0.625"},null,"C"]
[null,"s214.g6125",null,1,"-",0.445,"-",{"v":0.1342,"d":"0.134"},"SP",{"v":0.8085,"d":"0.809"},"CAH3 in Chlamydomonas, thylakoid lumen","C"]
["LCIA","s009.g544","-",0.004,"Y",0.523,"-",{"v":0.2526,"d":"0.253"},"SP",{"v":0.5392,"d":"0.539"},null,"C"]
[null,"s009.g545","-",0.012,"-",0.465,"-",{"v":0.0009,"d":"0.001"},"-",null,null,"O"]
[null,"s247.g6826",null,0.765,"-",0.449,"Y",{"v":0.8733,"d":"0.873"},"M",{"v":0.5898,"d":"0.590"},null,"M"]
["Biochemical CCM (C4-like Pathway)"]
["MDH","s267.g7798","-",0.207,"-",0.473,"Y",0.991,"-",{"v":0.6665,"d":"0.667"},null,"M"]
[null,"s330.g9301","-",0.161,"-",0.439,"-",0.089,"-",{"v":0.8797,"d":"0.880"},null,"O"]
["ME","s067.g2252","-",0.13,"-",0.437,"-",0.021,"-",{"v":0.8707,"d":"0.871"},null,"O"]
[null,"s095.g3463","-",0.246,"Y",0.587,"Y",0.999,"M",{"v":0.6177,"d":"0.618"},null,"M"]
[null,"s295.g8325","-",0.221,"-",0.48,"-",0.021,"SP",{"v":0.6177,"d":"0.618"},null,"SP"]
["PEPC","s145.g5140","-",0.157,"-",0.483,"Y",0.983,"M",{"v":0.8109,"d":"0.811"},null,"M"]
["PEPCK","s247.g6884","-",0.173,"-",0.475,"Y",{"v":0.9301,"d":"0.930"},"M",{"v":0.8108,"d":"0.811"},null,"M"]
["PPDK","s095.g3407","-",0.104,"-",0.431,"-",0.052,"-",{"v":0.8986,"d":"0.899"},null,"O"]
[null,"s182.g5453","-",0.174,"-",0.445,"Y",0.103,"-",{"v":0.8147,"d":"0.815"},null,"O"]
[null,"s182.g5454","Y",0.719,"Y",0.564,"Y",0.847,"SP",{"v":0.6417,"d":"0.642"},null,"P"]
["Basal CCM and photorespiration"]
["CA","s026.g1084","-",0.861,"-",0.47,"Y",{"v":0.9954,"d":"0.995"},"-",{"v":0.4465,"d":"0.447"},null,"M"]
["CI","s145.g4915","Y",0.953,"-",0.521,"-",{"v":0.42,"d":"0.420"},"SP",{"v":0.8097,"d":"0.810"},null,"M"]
["PGLP","s354.g10166","Y",1,"Y",0.552,"Y",{"v":0.9867,"d":"0.987"},"SP",{"v":0.4198,"d":"0.420"},null,"C"]
["GK","s043.g1836","-",0,"-",0.476,"Y",{"v":0.9204,"d":"0.920"},"-",{"v":0.2033,"d":"0.203"},null,"O"]
["GO","s009.g640","-",0.001,"-",0.472,"-",{"v":0.0972,"d":"0.097"},"-",{"v":0.1722,"d":"0.172"},null,"O"]
["AAT","s245.g6487","Y",0.986,"Y",0.518,"-",{"v":0.2957,"d":"0.296"},"SP",{"v":0.6378,"d":"0.638"}]
["GGAT","s096.g3637","-",0,"-",0.485,null,{"v":0.2927,"d":"0.293"},"-",{"v":0.1652,"d":"0.165"}]
["SHMT","s214.g6217","-",0.026,"-",0.463,"Y",{"v":0.9296,"d":"0.930"},"M",{"v":0.7996,"d":"0.800"}]
["Transporter"]
["PPT","s247.g6871","-",0.352,"-",0.434,"Y",{"v":0.1295,"d":"0.130"},"SP",{"v":0.6548,"d":"0.655"},null,"SP"]
[null,"s354.g10209","Y",0.895,"Y",0.546,"Y",{"v":0.6009,"d":"0.601"},"SP",{"v":0.7556,"d":"0.756"},null,"P"]
["NHD","s267.g7561","-",0.153,"-",0.458,"Y",{"v":0.2887,"d":"0.289"},"SP",{"v":0.4525,"d":"0.453"},null,"SP"]
[null,"s069.g2267","-",0.129,"-",0.473,"Y",{"v":0.0351,"d":"0.035"},"-",{"v":0.7295,"d":"0.730"},null,"O"]
[null,"s330.g9360","Y",0.84,"-",0.436,"Y",{"v":0.9276,"d":"0.928"},"SP",{"v":0.7505,"d":"0.751"},null,"SP"]
[null,"s082.g3096","-",0.102,"-",0.452,"-",{"v":0.0107,"d":"0.011"},"-",{"v":0.8005,"d":"0.801"},null,"O"]
[null,"s112.g4014","-",0.14,"Y",0.528,"Y",{"v":0.0318,"d":"0.032"},"-",{"v":0.8479,"d":"0.848"},null,"O"]
[null,"s308.g8745","-",0.196,"-",0.441,"Y",{"v":0.2941,"d":"0.294"},"SP",{"v":0.5924,"d":"0.592"},null,"SP"]
[null,"s080.g2617","-",0.107,"-",0.426,"-",{"v":0.0897,"d":"0.090"},"-",{"v":0.8245,"d":"0.825"},null,"O"]
[null,"s354.g10029","-",0.105,"-",0.436,"-",0.003,"SP",{"v":0.5007,"d":"0.501"},null,"SP"]
[null,"s165.g5328","-",0.289,"-",454,"-",0.092,"SP",{"v":0.4702,"d":"0.470"},null,"SP"]
["TPT","s026.g1018","Y",0.696,"Y",0.566,"Y",{"v":0.9583,"d":"0.958"},"SP",{"v":0.6223,"d":"0.622"},null,"P"]
[null,"s009.g521","-",0.5,"Y",0.512,"Y",{"v":0.7042,"d":"0.704"},"SP",{"v":0.5564,"d":"0.556"},null,"SP"]
[null,"s214.g6303","-",0.133,"-",0.458,"Y",{"v":0.0694,"d":"0.069"},"-",{"v":0.75,"d":"0.750"},null,"O"]
["BASS","s069.g2277","Y",0.844,"-",0.491,"-",{"v":0.1659,"d":"0.166"},"P",{"v":0.9054,"d":"0.905"},null,"P"]
[null,"s330.g9518","Y",0.672,"Y",0.537,"Y",{"v":0.9976,"d":"0.998"},"P",{"v":0.5702,"d":"0.570"},null,"P"]
["ATP/ADP translocator ","s140.g4664","-",0.161,"-",0.493,"Y",{"v":0.9207,"d":"0.921"},"M",{"v":0.7323,"d":"0.732"},null,"M"]
[]
["Note: Sum prediction was made based on the following criteria."]
["1) Proteins with both signal peptide and chloroplast transit peptide were predicted to be localized in chloroplast."]
["2) Prediction with the highest probabilities was chosen for proteins with ambiguous localizations."]
["3) When the program-based prediction is contradictory to the experimentally-resovled localization of homologs in other eukarytoic organisms, the subcellular localization of the homologs was adopted."]